BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001395
         (1086 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224089933|ref|XP_002308870.1| predicted protein [Populus trichocarpa]
 gi|222854846|gb|EEE92393.1| predicted protein [Populus trichocarpa]
          Length = 1042

 Score = 1349 bits (3491), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 706/1059 (66%), Positives = 822/1059 (77%), Gaps = 40/1059 (3%)

Query: 1    MRSKSKKQSKAPSRLSNSDLSAS-PRTPSLTSA---AWDSEEDFRTSLEDASTRYPTLIG 56
            M SK+KK SK PSRLSNSD SAS PRTPSL S+       +E+    LE+AS++YP LI 
Sbjct: 1    MPSKTKKNSKTPSRLSNSDQSASSPRTPSLASSIDLEASQQENIALCLEEASSKYPYLID 60

Query: 57   KSAFIGQITDIETDS----RGCKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFPLS 112
            KSAFIG+ITD+E +S    RGCKIWLSESSM++SSLAPGS+VSVSL    +RFS+     
Sbjct: 61   KSAFIGRITDVEAESSTTARGCKIWLSESSMVSSSLAPGSIVSVSLAAVERRFSSSSFPL 120

Query: 113  SLAD-ECVQQFGNESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGR 171
            S    E  +Q   ES+D+  N+ G+YFALATVFPSCKV KN  RLSS+L+Y MGCP SG+
Sbjct: 121  SSFSYEWSRQCEVESVDKITNEAGNYFALATVFPSCKVSKNGARLSSNLAYMMGCPASGK 180

Query: 172  TVFVYTIQSQFLTGLVNGSNKPYNGEANHFSVCTCQELHLELVPLRSRLKMNGAAFSKMK 231
             VFV+TI+++ LT +VNG++ P    A+  S+  C EL+LELVP   R+KM     S MK
Sbjct: 181  VVFVHTIRNKLLTDIVNGNDTPEGANADDLSLHNCNELYLELVPFMDRVKMKSDTMSAMK 240

Query: 232  VSAERSRDQLGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDI 291
            +SAE+  D+  NG+ SSPKTP+ QP+LSS S   L SP+ E++ S   N N  +V   +I
Sbjct: 241  LSAEKRHDRSENGMISSPKTPLCQPKLSSPSPIHLTSPICEEAASNISNSNGTDVGLLNI 300

Query: 292  KEVLEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERS 351
            KEVLEDESA KLLQ CA SWLYSR L+CGNLVA+P+LS + IF V  ANKLPAD      
Sbjct: 301  KEVLEDESAKKLLQVCATSWLYSRVLICGNLVAIPVLSNLCIFRVKSANKLPAD------ 354

Query: 352  QPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDIS 411
                   + H  +AF IN ETKVYL+  +N+ ++  ++  LP  Q E  N +  +  + S
Sbjct: 355  ------ELSHMKDAFSINRETKVYLHQHMNSTAERPQKQGLPLMQSECINGKTIIGNERS 408

Query: 412  KLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            KLGGL KEY +LKDII+SS+ K+TLS  GLR TKGVLLHGPPGTGKTSLARLC  D+GVN
Sbjct: 409  KLGGLHKEYTVLKDIIVSST-KNTLSCFGLRTTKGVLLHGPPGTGKTSLARLCVIDAGVN 467

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            LF+VNGPE+ SQ YGESEQA+H+VFDSA QSAPAVVFIDELDAIAPARKDGGEELSQRMV
Sbjct: 468  LFSVNGPEIFSQYYGESEQAMHKVFDSACQSAPAVVFIDELDAIAPARKDGGEELSQRMV 527

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            ATLLNLMDG+ RTDG+LVIAATNRPDSIEPALRRPGRLDREIEI               V
Sbjct: 528  ATLLNLMDGIARTDGLLVIAATNRPDSIEPALRRPGRLDREIEI--------------GV 573

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            PSP+QRL+ILH LLS MEHS+ D +++ L+MATHGFVGADLAALCNEAALVCL+R+++ +
Sbjct: 574  PSPSQRLDILHTLLSEMEHSVSDMQLKQLAMATHGFVGADLAALCNEAALVCLKRHARSK 633

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL--LSSS 709
             S     S G+   +EGHSD+M++ SDCS    +  RD  DSAS  TS LP SL  LSSS
Sbjct: 634  KSDYSSRSKGSSIAYEGHSDSMVKGSDCSTGARDMLRDGADSASSSTSHLPVSLENLSSS 693

Query: 710  LPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
                G VSEI DN   G+       F+ E+   L +   DFE ARMKVRPSAMREVILEV
Sbjct: 694  CS-DGDVSEITDNTEKGIIACPREEFLVEEEALLNIVSEDFEMARMKVRPSAMREVILEV 752

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            PKV WEDVGGQ E+KTQLMEAV WPQ HQ+AFKRIGTRPPTGILMFGPPGCSKTLMARAV
Sbjct: 753  PKVNWEDVGGQGEIKTQLMEAVLWPQTHQDAFKRIGTRPPTGILMFGPPGCSKTLMARAV 812

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            AS+AGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA IRGKESD
Sbjct: 813  ASKAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAVIRGKESD 872

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            GVSVSDRVMSQLL+ELDGL QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN+ D
Sbjct: 873  GVSVSDRVMSQLLIELDGLQQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNQND 932

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQH 1009
            RE+IFRIHL K+PCSSDVNI+ELACL++GCTGADI+LICREAA++AIEEN+DAS + MQH
Sbjct: 933  REDIFRIHLHKVPCSSDVNIKELACLTDGCTGADIALICREAAVAAIEENIDASEVPMQH 992

Query: 1010 LKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQ 1048
            LKTAI+ VQP+EI+SY++LSAKFQRLVHS ++ DE G Q
Sbjct: 993  LKTAIQQVQPTEINSYQDLSAKFQRLVHS-SDKDELGNQ 1030


>gi|255552465|ref|XP_002517276.1| calmodulin-binding protein, putative [Ricinus communis]
 gi|223543539|gb|EEF45069.1| calmodulin-binding protein, putative [Ricinus communis]
          Length = 1094

 Score = 1323 bits (3423), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 686/1055 (65%), Positives = 806/1055 (76%), Gaps = 59/1055 (5%)

Query: 1    MRSKSKKQSKAPSRLSNSDLSASPRTPSLTSAAWD----SEEDFRTSLEDASTRYPTLIG 56
            M SK KK  K  SRLSN++ S SPRTPSL S+  D    SE+D   SL++AS RYP++IG
Sbjct: 1    MPSKVKKHPKTASRLSNAEHSQSPRTPSLISSCDDLLEVSEQDVAISLQEASNRYPSMIG 60

Query: 57   KSAFIGQITDIETDSRGCKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFPLSSLAD 116
             SAFIG++TD++  S+GCKIWLSESSM+ASS++PGS+VSVSL  SG+R SN  PL S+  
Sbjct: 61   NSAFIGRLTDVDPHSKGCKIWLSESSMVASSISPGSIVSVSLAASGRRVSN--PLISIPG 118

Query: 117  ECVQQFGNESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGRTVFVY 176
            E  +QF  E+LD+T N+VG+YFA ATVFPSCK LK+ VR SSSLSYTMGCP SGR VFVY
Sbjct: 119  EFARQFEVENLDETTNEVGNYFAFATVFPSCKALKDGVRFSSSLSYTMGCPASGRLVFVY 178

Query: 177  TIQSQFLTGLVNGSNKPYNGEANHFSVCTCQELHLELVPLRSRLKMNGAAFSKMKVSAER 236
             +Q+Q L+GLVNG +KP + + +  S     ELHLELVP++ R+K +    SKM  SAE+
Sbjct: 179  PVQNQLLSGLVNGDSKPNDKKIDSLSSHNFYELHLELVPVKDRVKRSSDVISKMN-SAEK 237

Query: 237  SRDQLGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLE 296
            +  Q  NG +SSP+TP+ QP+LSS S +  AS   E+++S   N    +VD+FDIKEVL+
Sbjct: 238  THGQSENGKNSSPRTPLCQPKLSSSSPSLSASSRCEEAMSNLSNRRQTHVDSFDIKEVLK 297

Query: 297  DESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANK-----LPADLTNERS 351
            DES  +LLQ C  SWLYSR L+CGN+VA+P+LSE+ IF V+ AN+        DL  ERS
Sbjct: 298  DESVKQLLQACVVSWLYSRILICGNIVAIPILSELCIFRVVSANQSLEDNQNQDLIKERS 357

Query: 352  Q---PQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQ 408
                PQ +ESMDH      INHETKVYL+ P+N+  K+    +L   QIE  +V++ +  
Sbjct: 358  NSVCPQSSESMDHLKETISINHETKVYLHLPMNSACKTPYRSSLSFTQIENVHVKSVMAH 417

Query: 409  DISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +I+KLGGL KEYA+LKDII+S+ +K+   SLGLRPTKGVLLHGP GTGKTSLARLCA D+
Sbjct: 418  EITKLGGLHKEYAVLKDIILST-MKNDFLSLGLRPTKGVLLHGPTGTGKTSLARLCALDA 476

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GVNL +VNGPE++SQ +GESEQALHEVF SAS+ APAVVFIDELD+IAPARKDGGE LSQ
Sbjct: 477  GVNLLSVNGPEIISQYHGESEQALHEVFASASRGAPAVVFIDELDSIAPARKDGGEALSQ 536

Query: 529  RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            RMVATLLNLMDGV RTDGV++IAATNRPDSIEPALRRPGRLDREIEI             
Sbjct: 537  RMVATLLNLMDGVSRTDGVIIIAATNRPDSIEPALRRPGRLDREIEI------------- 583

Query: 589  AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
              VPSP QRL+IL+ LLS  EHSL D +V++L++ATHGFVGADLAALCNEAAL+CLRRY 
Sbjct: 584  -GVPSPKQRLDILNTLLSQREHSLSDLQVQHLAVATHGFVGADLAALCNEAALICLRRYV 642

Query: 649  KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSS 708
            K + S++ LHS G+    E + + ML  S         S  C DS S             
Sbjct: 643  KSRKSNNYLHSMGSPTVGESYHEIMLNGS---------SETCEDSVS------------- 680

Query: 709  SLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
                   +  +A +  N +S S   +   E    LK+   DFEKARMKVRPSAMREVILE
Sbjct: 681  -----SNLQSLAASSENSLSTSEAILVAEES--ILKVVFEDFEKARMKVRPSAMREVILE 733

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VPKV WEDVGGQ+EVK QLMEAVEWPQKHQ+AF+RIGTRPPTG+LMFGPPGCSKTLMARA
Sbjct: 734  VPKVNWEDVGGQKEVKAQLMEAVEWPQKHQDAFQRIGTRPPTGVLMFGPPGCSKTLMARA 793

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VASEAGLNF AVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA IRGKE+
Sbjct: 794  VASEAGLNFFAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAVIRGKEN 853

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
            DGVSVSDRVM+QLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN T
Sbjct: 854  DGVSVSDRVMTQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNAT 913

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQ 1008
            DRE IFRIHLRKIPCSSDV+I+EL+ L+EGCTGADIS ICREAA++AIEE +DAS +TM+
Sbjct: 914  DREAIFRIHLRKIPCSSDVSIKELSHLTEGCTGADISFICREAAMAAIEECIDASEVTMK 973

Query: 1009 HLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEAD 1043
            H +TAIR  +P    SY ELSAKFQRLVHSN   D
Sbjct: 974  HTRTAIRQAKPLNTESYNELSAKFQRLVHSNHRQD 1008


>gi|359481434|ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 homolog AF_1297-like [Vitis
            vinifera]
          Length = 1030

 Score = 1308 bits (3386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1073 (64%), Positives = 816/1073 (76%), Gaps = 60/1073 (5%)

Query: 1    MRSKSKKQSKAPSRLSNSDLSASPRTPSLTSAAWD---SEEDFRTSLEDASTRYPTLIGK 57
            M SK+KK SK+ S+LS SD S SP   S+ +   D   SEED    L++AS++ P+LIGK
Sbjct: 1    MPSKTKKHSKSLSKLSYSDKSESPSVSSVLTPPPDLEISEEDLLRYLDEASSKCPSLIGK 60

Query: 58   SAFIGQITDIETDSRGCKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFPLSSLADE 117
            SAFIG++T ++ DS+GCKIWLSE SM+A +LAPGS VSVSL  S K+FSNGFPLSSL DE
Sbjct: 61   SAFIGRVTGVDPDSKGCKIWLSEPSMVAFNLAPGSTVSVSLASSKKKFSNGFPLSSLTDE 120

Query: 118  CVQQFGNESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGRTVFVYT 177
              + F  +S ++   + G+YFALATVFPSCKVLKN VRLS +L +TMG P S R VFVY 
Sbjct: 121  STRHFQVDSGNKMPGEAGNYFALATVFPSCKVLKNGVRLSLNLYHTMGSPASARIVFVYL 180

Query: 178  IQSQFLTGLVNGSNKPYNGEANHFSVCTCQELHLELVPLRSRLKMNGAAFSKMKVSAERS 237
            IQSQ +TG VNGS K ++   N  S+  C+EL+LE++P ++   +N    S ++VS E +
Sbjct: 181  IQSQSVTGFVNGSRKSHSTTINGLSLYKCKELYLEMIPSKNGSTVNSDMQSTVQVSTETT 240

Query: 238  RDQLGNGIDSSPKTPM-YQPRLSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLE 296
              Q+ NG  SSPKTP+ YQ +L S + NQL SP+ +DSVS   N N+    +FDI EVL 
Sbjct: 241  NYQVSNGAASSPKTPVSYQSKLISPNSNQLTSPICDDSVSSLSNPNNKIFASFDITEVLG 300

Query: 297  DESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPAD-----LTNERS 351
            DE+A KLLQ+CAASWLYSRSLL GNLV +P+LSE+  F V GA KL  D     LT+ERS
Sbjct: 301  DETAKKLLQSCAASWLYSRSLLTGNLVTIPILSELCTFCVRGAIKLSPDSDNHDLTDERS 360

Query: 352  Q---PQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQ 408
                 +  +S+ H  +A V++ ETKVYLY P N+ S++ ++G  P+ ++EF+N +A V  
Sbjct: 361  HGLFSRAPDSVSHVDDACVVDRETKVYLYLPSNSSSETPQKGRPPHVELEFKNFKANVGS 420

Query: 409  DISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
             + KLGGLS+EYA+LKDIIIS+SVK+TLSS+GLR TKGVLLHGPPGTGKTSLA+LC  D+
Sbjct: 421  AV-KLGGLSEEYAVLKDIIISTSVKNTLSSMGLRTTKGVLLHGPPGTGKTSLAQLCICDA 479

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GVNLF+VNG E+VSQ YGESEQALHE+FDSASQ+APAVVFIDELDAIAPARKDGGEELS 
Sbjct: 480  GVNLFSVNGAEIVSQYYGESEQALHEIFDSASQAAPAVVFIDELDAIAPARKDGGEELSH 539

Query: 529  RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            R+VATLLNLMDG+ RTDG+LVIAATNRPDSIEPALRRPGRLDRE+EI             
Sbjct: 540  RIVATLLNLMDGISRTDGILVIAATNRPDSIEPALRRPGRLDREMEI------------- 586

Query: 589  AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
              VPSP QR +IL  LLS ME+SL D +++ L+  THGFVGADLAALCNEAALVCLRRY 
Sbjct: 587  -GVPSPGQRYDILLNLLSEMENSLSDMQIQQLATVTHGFVGADLAALCNEAALVCLRRYV 645

Query: 649  KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITES-SRDCLDSASPCTSDLPTSLLS 707
            K + S D  H   T    +G     + D D S  + +  SRD  D AS    DL      
Sbjct: 646  KFKKSCDDFHCNRTSIVHDGK----IADPDDSEALEDQFSRDHPDCASSSPPDL------ 695

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
                               VS S    F+ E+ C L +   DFEKARMK+RPSAMREVIL
Sbjct: 696  ------------------SVSRS----FIMEEECMLVVTFEDFEKARMKIRPSAMREVIL 733

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            EVP+VKWEDVGGQ EVK QLMEAVEWPQKHQ+AFKRIGTRPPTG+L+FGPPGCSKTLMAR
Sbjct: 734  EVPRVKWEDVGGQNEVKAQLMEAVEWPQKHQDAFKRIGTRPPTGVLLFGPPGCSKTLMAR 793

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA IRGKE
Sbjct: 794  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAVIRGKE 853

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            SDGVSV+DRVMSQLLVELDGLHQRV+VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE
Sbjct: 854  SDGVSVADRVMSQLLVELDGLHQRVDVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 913

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITM 1007
            +DR +IF IHL KIP SSDV+I ELA L+EG TGADISLICREAAI+AIE+NLDAS ITM
Sbjct: 914  SDRADIFHIHLCKIPFSSDVSIGELAFLTEGYTGADISLICREAAIAAIEDNLDASEITM 973

Query: 1008 QHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMW 1060
            +HLKTAIR VQPSE+ SY+ELS KFQRLVHS+ + DESG  LR SKS    +W
Sbjct: 974  EHLKTAIRQVQPSELQSYQELSTKFQRLVHSSDKRDESGLPLRSSKSTWMPLW 1026


>gi|297820436|ref|XP_002878101.1| CIP111 [Arabidopsis lyrata subsp. lyrata]
 gi|297323939|gb|EFH54360.1| CIP111 [Arabidopsis lyrata subsp. lyrata]
          Length = 1025

 Score = 1162 bits (3007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1076 (59%), Positives = 782/1076 (72%), Gaps = 68/1076 (6%)

Query: 6    KKQSKAPSRLSNSDLSASPRTPSLTSAAWDS----EEDFRTSLEDASTRYPTLIGKSAFI 61
            KKQS+ PSRLSNS+  ASPRTP+ ++ + D+    EE+ R S+E+AS  +P+L+GKSA I
Sbjct: 5    KKQSRTPSRLSNSEPPASPRTPASSTTSRDTDFINEEELRRSIEEASAAFPSLLGKSAII 64

Query: 62   GQITDIETDS-RGCKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFPLSSLADECVQ 120
            G++ D+ ++S RG KIWLSE+SM+A+SL+PGS VSVSL     RFS  FPLS +  E   
Sbjct: 65   GRVADVASESIRGSKIWLSETSMVAASLSPGSTVSVSLASPESRFSRSFPLSLIKSE--- 121

Query: 121  QFGNESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGRTVFVYTIQS 180
             +G++   + A++ G+YF LATVF S KVLK+ VR+S +L Y +GCP+SGRTVFVY +  
Sbjct: 122  -YGDDKESRIADEPGNYFVLATVFSSSKVLKDAVRISLNLCYGLGCPVSGRTVFVYPVSG 180

Query: 181  QFLTGLVNGSNKPYNGEANHFSVCTCQELHLELVPLRSRLKMNGAAFSKMKVSAERSRDQ 240
              L+   +G+    + + NH S+  C+EL LEL P R+ L+         K   E S +Q
Sbjct: 181  PSLSDQFHGNGGSLSDDVNHLSLLACKELCLELTPFRNMLQA--------KNGFESSHEQ 232

Query: 241  LGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLEDESA 300
             GNG +S+PKTP    + SS      ASP+ +DSV  S    S +  + D++EVL +ES+
Sbjct: 233  NGNG-NSTPKTPSNLQKFSSPRPESPASPILQDSVFSSKQRFS-SESSIDLREVLSNESS 290

Query: 301  IKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMD 360
             KLLQ CA+SWLY  SLL GN VAVP+LSEI IF V  A+K  +D T++R+Q        
Sbjct: 291  KKLLQICASSWLYPCSLLYGNFVAVPILSEICIFCVKRADKRQSD-TSKRNQ-------- 341

Query: 361  HESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEY 420
                AF+IN ETKVYL+  L+  S+     ++   Q +  +    V  +ISKLGGLSKEY
Sbjct: 342  ----AFIINQETKVYLHHTLDLASEIRERKSVQGLQFDEDDEGENVGCEISKLGGLSKEY 397

Query: 421  AILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEV 480
            AIL+DI++SSS K++LSSLGLRPTKGVL++GPPGTGKTSLAR  A DSGVN F+VNGPE+
Sbjct: 398  AILRDIVVSSSTKNSLSSLGLRPTKGVLIYGPPGTGKTSLARSFARDSGVNFFSVNGPEI 457

Query: 481  VSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDG 540
            +SQ  GESE+AL EVF SAS + PAVVFID+LDAIAPARK+GGEELSQRMVATLLNLMDG
Sbjct: 458  ISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEELSQRMVATLLNLMDG 517

Query: 541  VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI 600
            + R+DGV+VIAATNRPDSIEPALRRPGRLDREIEI               VPS AQR +I
Sbjct: 518  ISRSDGVVVIAATNRPDSIEPALRRPGRLDREIEI--------------GVPSSAQRSDI 563

Query: 601  LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHST 660
            L  +L GM HSL D ++E L+MATHGFVGADL+ALC EAA VCLRR+    +SS      
Sbjct: 564  LRVILHGMRHSLSDIQIEQLAMATHGFVGADLSALCCEAAFVCLRRHLDQSSSS------ 617

Query: 661  GTLFEFEGHSDTMLQDS---DCSRNITESSRDCLDSASPCTSDLPT-SLLSSSLPLRGTV 716
                     S+  L+++   + S N+++ S D  DSAS C +  PT S    +  L GTV
Sbjct: 618  ---------SNLPLEEAPIAESSTNMSDISSDSSDSASSCITVSPTTSGAQRTFSLNGTV 668

Query: 717  SEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWED 776
            S +AD+  +  +  S  +   E    L +   DFE A+ K+RPSAMREVILEVPKV WED
Sbjct: 669  SRVADDIQSSSNSCSEQILRKEDERTLSVGFEDFENAKTKIRPSAMREVILEVPKVNWED 728

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 836
            VGGQ EVK QLMEAVEWPQKHQ+AFKRIGTRPP+GILMFGPPGCSKTLMARAVASEA LN
Sbjct: 729  VGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLN 788

Query: 837  FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR 896
            FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID LA+IRGKE+DGVSVSDR
Sbjct: 789  FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGVSVSDR 848

Query: 897  VMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRI 956
            VMSQLLVELDGLHQRV VTVIAATNRPDKID ALLRPGRFDRLLYVGPP+E DRE I +I
Sbjct: 849  VMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPDEADREAILKI 908

Query: 957  HLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRH 1016
            HLRKIPCSSD+ ++E A +++G TGADISLICREAAI+A+EE+L+   I+M+HLK AI  
Sbjct: 909  HLRKIPCSSDICLKEFASITKGYTGADISLICREAAIAALEESLEMEEISMRHLKAAISQ 968

Query: 1017 VQPSEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMWTLIKSISLFLCR 1072
            ++P+EI SYK LS KFQRLVH++ + +E   Q  P       +WT +KS+++FL R
Sbjct: 969  IEPTEIQSYKALSEKFQRLVHTDPQREEEVTQ--PGNK-SRTLWTPLKSVAMFLRR 1021


>gi|6760428|gb|AAF28347.1| calmodulin-binding protein [Arabidopsis thaliana]
 gi|6760430|gb|AAF28348.1| calmodulin-binding protein [Arabidopsis thaliana]
          Length = 1022

 Score = 1161 bits (3003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1076 (59%), Positives = 769/1076 (71%), Gaps = 65/1076 (6%)

Query: 6    KKQSKAPSRLSNSDLSASPRTPSLTSAAWDS----EEDFRTSLEDASTRYPTLIGKSAFI 61
            KKQS+ PSRLSNS+  ASPRTP+ ++ + D+    EE+ R S+E+AS  +P L+GKSA I
Sbjct: 5    KKQSRTPSRLSNSEPPASPRTPASSTTSRDTDSINEEELRRSIEEASAAFPCLLGKSAII 64

Query: 62   GQITDIETDS-RGCKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFPLSSLADECVQ 120
             ++ D+ ++S RG KIWLSE+SM+A+SL+PGS VSVSL     RFS  FPLSS+  E   
Sbjct: 65   ARVADVASESIRGSKIWLSETSMVAASLSPGSTVSVSLASPESRFSRSFPLSSIKAE--- 121

Query: 121  QFGNESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGRTVFVYTIQS 180
             +G++S    A++ G+YF L TVF S KV K+ VR+S +L Y +GCP+SGRTVFVY +  
Sbjct: 122  -YGDDSESIIADEPGNYFVLTTVFSSSKVFKDAVRISLNLCYGLGCPVSGRTVFVYPVSG 180

Query: 181  QFLTGLVNGSNKPYNGEANHFSVCTCQELHLELVPLRSRLKMNGAAFSKMKVSAERSRDQ 240
              L+   NG+ +    + NH S+  C+EL LEL P R+ L+   A         E S +Q
Sbjct: 181  PSLSDQFNGNGRSRYDDVNHLSLLACKELCLELTPFRNMLQAKNAF--------ESSYEQ 232

Query: 241  LGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLEDESA 300
             GNG +S+PKTP    + SS       SP+ EDSV  S      +  + D++EVL +ES+
Sbjct: 233  NGNG-NSTPKTPANLQKFSSPRPKSPVSPIIEDSVF-SCKQRFSSESSIDLREVLSNESS 290

Query: 301  IKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMD 360
             KLLQ CA+SWLY  SLL GN V+VP+LSEI IF V  A+K P+D +N            
Sbjct: 291  KKLLQICASSWLYPCSLLYGNFVSVPILSEICIFCVKRADKRPSDTSNR----------- 339

Query: 361  HESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQI-EFQNVQATVEQDISKLGGLSKE 419
              ++AF+IN ETKVYL+  L+  S+      +   Q  E +NV      +ISKLGGLSKE
Sbjct: 340  --NHAFMINQETKVYLHHTLDLASEIQGRTFVQGLQFDEGENVGC----EISKLGGLSKE 393

Query: 420  YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPE 479
            YAIL+DII SSS+K++LS LGLRPTKGVL+HGPPGTGKTSLAR  A  SGVN F+VNGPE
Sbjct: 394  YAILRDIIDSSSIKNSLSGLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPE 453

Query: 480  VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD 539
            ++SQ  GESE+AL EVF SAS + PA VFID+LDAIAPARK+GGEELSQRMVATLLNLMD
Sbjct: 454  IISQYLGESEKALDEVFRSASNATPAAVFIDDLDAIAPARKEGGEELSQRMVATLLNLMD 513

Query: 540  GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLE 599
            G+ RTDGV+VIAATNRPDSIEPALRRPGRLDREIEI                PS  QR +
Sbjct: 514  GISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEI--------------GAPSSTQRSD 559

Query: 600  ILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHS 659
            ILH +L GM HSL + +VE L+MATHGFVGADL+ALC EAA VCLRR+     SS  L  
Sbjct: 560  ILHVILCGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLDQSYSSSNLP- 618

Query: 660  TGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEI 719
                 E    +++    SD S + ++S+  C+      T    TS    S  L  TVS +
Sbjct: 619  ----LEEAPIAESSSSMSDISSDSSDSASSCI------TISATTSGAQRSFSLDETVSLV 668

Query: 720  ADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG 779
            AD+  N  +  S  M   +    L +   DFE A+ K+RPSAMREVILEVPKV WEDVGG
Sbjct: 669  ADDNQNNGNSCSEQMLRKQGEHTLSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGG 728

Query: 780  QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLA 839
            Q EVK QLMEAVEWPQKHQ+AFKRIGTRPP+GILMFGPPGCSKTLMARAVASEA LNFLA
Sbjct: 729  QNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLA 788

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMS 899
            VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID LA+IRGKE+DGVSVSDRVMS
Sbjct: 789  VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMS 848

Query: 900  QLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR 959
            QLLVELDGLHQRV VTVIAATNRPDKID ALLRPGRFDRLLYVGPPNETDRE I +IHLR
Sbjct: 849  QLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLR 908

Query: 960  KIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            KIPCSSD+ ++ELA +++G TGADISLICREAAI+A+EE+L+   I+M+HLK AI  ++P
Sbjct: 909  KIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEMEEISMRHLKAAISQIEP 968

Query: 1020 SEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMWTLIKSISLFLCRFPA 1075
            +EI SYK LS KFQRLVH++ + +E   Q  P      ++WT +KS+++FL R  A
Sbjct: 969  TEILSYKALSEKFQRLVHTDPQREEEVTQ--PGNK-SRSLWTPLKSVAMFLRRHIA 1021


>gi|15228991|ref|NP_191228.1| Cam interacting protein 111 [Arabidopsis thaliana]
 gi|75334903|sp|Q9LET7.1|CI111_ARATH RecName: Full=Calmodulin-interacting protein 111;
            Short=CaM-interacting protein 111; AltName: Full=ATPase
            family AAA domain-containing protein CIP111
 gi|9662988|emb|CAC00732.1| calmodulin-binding protein [Arabidopsis thaliana]
 gi|332646031|gb|AEE79552.1| Cam interacting protein 111 [Arabidopsis thaliana]
          Length = 1022

 Score = 1150 bits (2975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1073 (59%), Positives = 772/1073 (71%), Gaps = 65/1073 (6%)

Query: 6    KKQSKAPSRLSNSDLSASPRTPSLTSAAWDS----EEDFRTSLEDASTRYPTLIGKSAFI 61
            KKQS+ PSRLSNS+  ASPRTP+ ++ + D+    EE+ R S+E+AS  +P L+GKSA I
Sbjct: 5    KKQSRTPSRLSNSEPPASPRTPASSTTSRDTDSINEEELRRSIEEASAAFPCLLGKSAII 64

Query: 62   GQITDIETDS-RGCKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFPLSSLADECVQ 120
             ++ D+ ++S RG KIWLSE+SM+A+SL+PGS VSVSL     RFS  FPLSS+  E   
Sbjct: 65   ARVADVASESIRGSKIWLSETSMVAASLSPGSTVSVSLASPESRFSRSFPLSSIKAE--- 121

Query: 121  QFGNESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGRTVFVYTIQS 180
             +G++S    A++ G+YF L TVF S KV K+ VR+S +L Y +GCP+SGRTVFVY +  
Sbjct: 122  -YGDDSESIIADEPGNYFVLTTVFSSSKVFKDAVRISLNLCYGLGCPVSGRTVFVYPVSG 180

Query: 181  QFLTGLVNGSNKPYNGEANHFSVCTCQELHLELVPLRSRLKMNGAAFSKMKVSAERSRDQ 240
              L+   NG+ +    + NH S+  C+EL LEL P R+ L+   A         E S +Q
Sbjct: 181  PSLSDQFNGNGRSRYDDVNHLSLLACKELCLELTPFRNMLQAKNAF--------ESSYEQ 232

Query: 241  LGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLEDESA 300
             GNG +S+PKTP    + SS       SP+ EDSV  S      +  + D++EVL +ES+
Sbjct: 233  NGNG-NSTPKTPANLQKFSSPRPKSPVSPIIEDSVF-SCKQRFSSESSIDLREVLSNESS 290

Query: 301  IKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMD 360
             KLLQ CA+SWLY  SLL GN V+VP+LSEI IF V  A+K P+D +N            
Sbjct: 291  KKLLQICASSWLYPCSLLYGNFVSVPILSEICIFCVKRADKRPSDTSNR----------- 339

Query: 361  HESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQI-EFQNVQATVEQDISKLGGLSKE 419
              ++AF+IN ETKVYL+  L+  S+      +   Q  E +NV      +ISKLGGLSKE
Sbjct: 340  --NHAFMINQETKVYLHHTLDLASEIQGRTFVQGLQFDEGENVGC----EISKLGGLSKE 393

Query: 420  YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPE 479
            YAIL+DII SSS+K++LSSLGLRPTKGVL+HGPPGTGKTSLAR  A  SGVN F+VNGPE
Sbjct: 394  YAILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPE 453

Query: 480  VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD 539
            ++SQ  GESE+AL EVF SAS + PAVVFID+LDAIAPARK+GGEELSQRMVATLLNLMD
Sbjct: 454  IISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEELSQRMVATLLNLMD 513

Query: 540  GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLE 599
            G+ RTDGV+VIAATNRPDSIEPALRRPGRLDREIEI               VPS  QR +
Sbjct: 514  GISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEI--------------GVPSSTQRSD 559

Query: 600  ILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHS 659
            ILH +L GM HSL + +VE L+MATHGFVGADL+ALC EAA VCLRR+    +SS  L  
Sbjct: 560  ILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLDQSSSSSNLP- 618

Query: 660  TGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEI 719
                 E    +++    SD S + ++S+  C+      T    TS    S  L  TVS +
Sbjct: 619  ----LEEAPIAESSSNMSDISSDSSDSASSCI------TISATTSGAQRSFSLDETVSLV 668

Query: 720  ADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG 779
            AD+  N  +  S  M   +    L +   DFE A+ K+RPSAMREVILEVPKV WEDVGG
Sbjct: 669  ADDIQNNGNSCSEQMLRKQGEHTLSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGG 728

Query: 780  QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLA 839
            Q EVK QLMEAVEWPQKHQ+AFKRIGTRPP+GILMFGPPGCSKTLMARAVASEA LNFLA
Sbjct: 729  QNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLA 788

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMS 899
            VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID LA+IRGKE+DGVSVSDRVMS
Sbjct: 789  VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMS 848

Query: 900  QLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR 959
            QLLVELDGLHQRV VTVIAATNRPDKID ALLRPGRFDRLLYVGPPNETDRE I +IHLR
Sbjct: 849  QLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLR 908

Query: 960  KIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            KIPCSSD+ ++ELA +++G TGADISLICREAAI+A+EE+L+   I+M+HLK AI  ++P
Sbjct: 909  KIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEMEEISMRHLKAAISQIEP 968

Query: 1020 SEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMWTLIKSISLFLCR 1072
            +EI SYK LS KFQRLVH++ + +E   Q  P      ++WT ++S+++FL R
Sbjct: 969  TEILSYKALSEKFQRLVHTDPQREEEVTQ--PGNK-SRSLWTPLRSVAMFLRR 1018


>gi|356503365|ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 homolog AF_1297-like
            [Glycine max]
          Length = 1036

 Score = 1133 bits (2931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1040 (58%), Positives = 737/1040 (70%), Gaps = 65/1040 (6%)

Query: 45   EDASTRYPTLIGKSAFIGQITDIE-TDSRGCKIWLSESSMLASSLAPGSLVSVSLPVSGK 103
            E+AS ++ +LI KSAF+ ++T ++ T     +IWLS  SML+ S +P S VSVS+P SG+
Sbjct: 46   EEASRKFSSLIAKSAFVAELTHVDDTVPVSNRIWLSAPSMLSLSFSPASTVSVSIPSSGE 105

Query: 104  RFS--NGFPLSSLADECVQQFGNESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLS 161
            + S  + FPL+SLADEC + +  ES     +  G+YF LATVFPS KVLKN VRLSS+L 
Sbjct: 106  KSSQLHSFPLASLADECEKFYELESSKAFDDYAGNYFVLATVFPSSKVLKNGVRLSSNLY 165

Query: 162  YTMGCPLSGRTVFVYTIQSQFLTGLVNGSNKPYNGEANHFSVCTCQELHLELVPLRSRLK 221
            Y MGCP  G +VFV+ IQ      L NGSN+ ++ E N   +  C+EL+L+LVP ++ L 
Sbjct: 166  YAMGCPPLGTSVFVHPIQK----SLANGSNEQHSTENNCLPIYNCKELYLQLVPSKNGLP 221

Query: 222  MNGAAFSKMKVSAERSRDQLGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNW 281
            +    F    +S  +S  Q  N I +SP TP    + S+     ++SP+ +DS S   N 
Sbjct: 222  LKFNNFPSSGMSKVKSHVQSENDIIASPATPSNGSKFSN--AIGMSSPLFDDSASSVPNL 279

Query: 282  NSLNVDAFDIKEVLEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANK 341
            NS ++++FD+   L DES+ ++L T A  WLYSRSLL GNLV VPMLSE+  F VIGA K
Sbjct: 280  NSQSLNSFDVSLALRDESSKEILLTGAKPWLYSRSLLLGNLVNVPMLSELCFFQVIGAKK 339

Query: 342  LPADLT-------NERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPN 394
             P   +       N    P+ ++  +  + AF +N ETKV+L  P NA S+   +  +P 
Sbjct: 340  QPVTKSDHCPSNGNSDLYPEDSDIAESVNQAFTVNDETKVFLSLPSNAASEEPIQRDIPC 399

Query: 395  AQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPG 454
             ++E +   A++   ISKLGGLSKEY +LKDII SS   +  SS GLR T+GVLLHGPPG
Sbjct: 400  VKLEHKVANASLHDKISKLGGLSKEYTLLKDIISSSVSDAL-SSFGLRTTRGVLLHGPPG 458

Query: 455  TGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDA 514
            TGKTSLA+LCAHD GV  F +NGPE+V+Q YGESEQ LHE+FDSA Q+APAVVFIDELDA
Sbjct: 459  TGKTSLAQLCAHDVGVKFFPINGPEIVTQYYGESEQQLHELFDSAIQAAPAVVFIDELDA 518

Query: 515  IAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIE 574
            IAPARKDGGEELSQR+VATLLNL+DG+ R++G+LVIAATNRPD IEPALRRPGR D+EIE
Sbjct: 519  IAPARKDGGEELSQRLVATLLNLVDGISRSEGLLVIAATNRPDHIEPALRRPGRFDKEIE 578

Query: 575  IDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAA 634
            I               VPSP QR +IL  LLS M+HSL + ++E L+  THGFVGADLAA
Sbjct: 579  I--------------GVPSPNQRSDILLTLLSEMDHSLAELQIENLATVTHGFVGADLAA 624

Query: 635  LCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITES------SR 688
            LCNEAAL+CLRRY+  + + D                       CS  ITE       + 
Sbjct: 625  LCNEAALICLRRYANFKKTYD----------------------SCSDYITEQPALMNGAT 662

Query: 689  DCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELV 748
            + +D +   TS +    ++SS  L   +  +       + DS       E+   LK+   
Sbjct: 663  NSIDHSGDATSSVSDMSVASSRVLPSCMIGMTSEAMEIIPDSG------EEEQILKVSFE 716

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+KARMK+RPSAMREVILEVPKV WEDVGGQ+EVK QLMEAVEWPQKH +AF RIGTRP
Sbjct: 717  DFQKARMKIRPSAMREVILEVPKVNWEDVGGQKEVKAQLMEAVEWPQKHHDAFNRIGTRP 776

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            PTG+LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA
Sbjct: 777  PTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 836

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSI+FFDEID LA  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP
Sbjct: 837  PSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 896

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDRLLYVGPPNE DREEIFRIHLRKIPC SDV+++ELA L++GCTGADISLIC
Sbjct: 897  ALLRPGRFDRLLYVGPPNEVDREEIFRIHLRKIPCGSDVSLKELARLTDGCTGADISLIC 956

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQ 1048
            REAA++AIEE+LDAS ITM+HLK AI+ +QPSE+HSY++LS KFQR V      DE    
Sbjct: 957  REAAVAAIEESLDASVITMEHLKMAIKQIQPSEVHSYQKLSTKFQRAVRCCDIKDEFNDM 1016

Query: 1049 LRPSKSIGSNMWTLIKSISL 1068
               S+S   ++W  IKS +L
Sbjct: 1017 PCDSRSTQFSIWKFIKSYTL 1036


>gi|449517549|ref|XP_004165808.1| PREDICTED: calmodulin-interacting protein 111-like [Cucumis sativus]
          Length = 1027

 Score = 1110 bits (2871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1087 (57%), Positives = 770/1087 (70%), Gaps = 82/1087 (7%)

Query: 1    MRSKSKKQSKAPSRLSNSDLSASPRTP-SLTSAAWDSEEDFRTSLEDASTRYPTLIGKSA 59
            M SK KK +K  SRLSNS+ S SP +  ++   +  SE++F +S+E+AS++YP LIGKSA
Sbjct: 1    MPSKGKKNAKTLSRLSNSNHSQSPVSRFTIPPVSQVSEDEFLSSIEEASSKYPFLIGKSA 60

Query: 60   FIGQITDIETDSRGCKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFPLSSLADECV 119
            F+G++      S  CK+WLSESSMLASS   G++VSV+L   G      FPLSSLADEC 
Sbjct: 61   FVGRLIKDPVQSTACKVWLSESSMLASSFTQGAIVSVALSSEG----GNFPLSSLADECG 116

Query: 120  QQFGNESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGRTVFVYTIQ 179
              FG +  +   ++ G+YFALA +F S K L + V+LS++LS+T+GCP  GR VF+  ++
Sbjct: 117  MHFGVDYGNSIIHEAGNYFALARIFSSGKELNDGVQLSTNLSFTLGCPTIGRVVFISPLK 176

Query: 180  SQFLTGLVNGSNKPYNGEANHFSVCTCQELHLEL-----VPLRSRLKMNGAAFSKMKVSA 234
            +      +N + K  + E N   +  C+EL L+L     V  +  L  +   +S+ KV  
Sbjct: 177  THLCNDPLNDNGKLKSTEVNFLRIYNCKELFLDLASSTNVSTKDNLFPSSTIYSR-KV-- 233

Query: 235  ERSRDQLGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEV 294
               R + GN              L+S S  + ASP  ++ VS   N  S  V +  I+E 
Sbjct: 234  -HGRSESGN--------------LTSPSTMRSASPKCDEVVS---NLPSPFVHSL-IEES 274

Query: 295  LEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPA-----DLTNE 349
            L D++  K LQT A++ LY R +L GNLV +P+LS++  F V GA  L       D  N 
Sbjct: 275  LGDDTVRKTLQTIASNELYKRCVLRGNLVTIPVLSDLCTFHVRGAKGLSGYDDSYDSVNS 334

Query: 350  RSQP--QVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVE 407
             S    Q   S ++ + AF I+  TKV++      VS++ +E    N + +  N++A V+
Sbjct: 335  GSDDHFQHYSSDEYANCAFNIDQLTKVFINVQSTTVSETNQEIFPSNVEPQNLNIRAKVK 394

Query: 408  QDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
              + KLGGLSKEY++LKDIIISSS+ ST+SSLG R TKGVLLHGPPGTGKTSLA+L AHD
Sbjct: 395  PKVRKLGGLSKEYSVLKDIIISSSLNSTMSSLGFRTTKGVLLHGPPGTGKTSLAQLSAHD 454

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
            +GVNLF +NGPE++SQ +GESEQALH+VF+ ASQ+APAVV IDELDAIAPARKDGGEELS
Sbjct: 455  AGVNLFYLNGPEIISQYHGESEQALHDVFEEASQAAPAVVLIDELDAIAPARKDGGEELS 514

Query: 528  QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            QR+VATLLNLMDG+ R+ G LVIA+TNRPDSIEPALRRPGRLDREIEI            
Sbjct: 515  QRIVATLLNLMDGIKRSGGPLVIASTNRPDSIEPALRRPGRLDREIEI------------ 562

Query: 588  PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
               VPSP QRL+ILH +LS MEHSL   +V++L+M THGFVGADLAALCNEAALVC+RRY
Sbjct: 563  --GVPSPNQRLDILHTILSEMEHSLSVVQVQHLAMVTHGFVGADLAALCNEAALVCIRRY 620

Query: 648  SKIQTSSDVLHSTG-TLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLL 706
             K + SSD  HS G ++   E H+ + +  +  S +I+E +          TSD P + +
Sbjct: 621  QKFKVSSD-YHSFGRSVIAEEQHNISGVCQNLVSSSISEHT---------FTSD-PLTCV 669

Query: 707  SSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVI 766
            SS+        E+       V+DS      SE  C LK+   DFE ARMKVRPSAMREVI
Sbjct: 670  SSN--------EV-------VADSEDSFNSSEIKCKLKVVFEDFEIARMKVRPSAMREVI 714

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            LEVPKVKWED+GGQ EVK QLME VEWPQKHQ+AFKRIGTRPP G+L+FGPPGCSKTLMA
Sbjct: 715  LEVPKVKWEDIGGQMEVKAQLMETVEWPQKHQDAFKRIGTRPPAGVLLFGPPGCSKTLMA 774

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSI+FFDEIDGLA IRGK
Sbjct: 775  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDGLAVIRGK 834

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            ESDGVSVSDRVMSQLLVELDGLHQRV VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN
Sbjct: 835  ESDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 894

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRIT 1006
            E++REEIFRIHL K+PCS DV+ R+LA LS+GCTGADISLICRE+A+ A+EENL+AS I+
Sbjct: 895  ESEREEIFRIHLCKVPCSPDVSTRKLASLSQGCTGADISLICRESALLALEENLEASVIS 954

Query: 1007 MQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMWTLIKSI 1066
            MQHL+TA RHV+PSE   Y+ELS++FQRLV S+++  E     + S+S   + W L+KS 
Sbjct: 955  MQHLETAARHVKPSETAPYRELSSRFQRLVCSSSQ--EVNVVCQQSRSNWFSFWPLVKSA 1012

Query: 1067 SLFLCRF 1073
             L   RF
Sbjct: 1013 VLLFSRF 1019


>gi|449438683|ref|XP_004137117.1| PREDICTED: calmodulin-interacting protein 111-like [Cucumis sativus]
          Length = 1026

 Score = 1107 bits (2864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1087 (57%), Positives = 769/1087 (70%), Gaps = 83/1087 (7%)

Query: 1    MRSKSKKQSKAPSRLSNSDLSASPRTP-SLTSAAWDSEEDFRTSLEDASTRYPTLIGKSA 59
            M SK KK +K  SRLSNS+ S SP +  ++   +  SE++F +S+E+AS++YP LIGKSA
Sbjct: 1    MPSKGKKNAKTLSRLSNSNHSQSPVSRFTIPPVSQVSEDEFLSSIEEASSKYPFLIGKSA 60

Query: 60   FIGQITDIETDSRGCKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFPLSSLADECV 119
            F+G++      S  CK+WLSESSMLASS   G++VSV+L   G      FPLSSLADEC 
Sbjct: 61   FVGRLIKDPVQSTACKVWLSESSMLASSFTQGAIVSVALSSEG----GNFPLSSLADECG 116

Query: 120  QQFGNESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGRTVFVYTIQ 179
              FG +  +   ++ G+YFALA +F S K L + V+LS++LS+T+GCP  GR VF+  ++
Sbjct: 117  MHFGVDYGNSIIHEAGNYFALARIFSSGKELNDGVQLSTNLSFTLGCPTIGRVVFISPLK 176

Query: 180  SQFLTGLVNGSNKPYNGEANHFSVCTCQELHLEL-----VPLRSRLKMNGAAFSKMKVSA 234
            +      +N + K  + E N   +  C+EL L+L     V  +  L  +   +S+ KV  
Sbjct: 177  THLCNDPLNDNGKLKSTEVNFLRIYNCKELFLDLASSTNVSTKDNLFPSSTIYSR-KV-- 233

Query: 235  ERSRDQLGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEV 294
               R + GN              L+S S  + ASP  ++ VS   N  S  V +  + E 
Sbjct: 234  -HGRSESGN--------------LTSPSTMRSASPKCDEVVS---NLPSPFVHS--LIES 273

Query: 295  LEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPA-----DLTNE 349
            L D++  K LQT A++ LY R +L GNLV +P+LS++  F V GA  L       D  N 
Sbjct: 274  LGDDTVRKTLQTIASNELYKRCVLRGNLVTIPVLSDLCTFHVRGAKGLSGYDDSYDSVNS 333

Query: 350  RSQP--QVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVE 407
             S    Q   S ++ + AF I+  TKV++      VS++ +E    N + +  N++A V+
Sbjct: 334  GSDDHFQHYSSDEYANCAFNIDQLTKVFINVQSTTVSETNQEIFPSNVEPQNLNIRAKVK 393

Query: 408  QDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
              + KLGGLSKEY++LKDIIISSS+ ST+SSLG R TKGVLLHGPPGTGKTSLA+L AHD
Sbjct: 394  PKVRKLGGLSKEYSVLKDIIISSSLNSTMSSLGFRTTKGVLLHGPPGTGKTSLAQLSAHD 453

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
            +GVNLF +NGPE++SQ +GESEQALH+VF+ ASQ+APAVV IDELDAIAPARKDGGEELS
Sbjct: 454  AGVNLFYLNGPEIISQYHGESEQALHDVFEEASQAAPAVVLIDELDAIAPARKDGGEELS 513

Query: 528  QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            QR+VATLLNLMDG+ R+ G LVIA+TNRPDSIEPALRRPGRLDREIEI            
Sbjct: 514  QRIVATLLNLMDGIKRSGGPLVIASTNRPDSIEPALRRPGRLDREIEI------------ 561

Query: 588  PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
               VPSP QRL+ILH +LS MEHSL   +V++L+M THGFVGADLAALCNEAALVC+RRY
Sbjct: 562  --GVPSPNQRLDILHTILSEMEHSLSVVQVQHLAMVTHGFVGADLAALCNEAALVCIRRY 619

Query: 648  SKIQTSSDVLHSTG-TLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLL 706
             K + SSD  HS G ++   E H+ + +  +  S +I+E +          TSD P + +
Sbjct: 620  QKFKVSSD-YHSFGRSVIAEEQHNISGVCQNLVSSSISEHT---------FTSD-PLTCV 668

Query: 707  SSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVI 766
            SS+        E+       V+DS      SE  C LK+   DFE ARMKVRPSAMREVI
Sbjct: 669  SSN--------EV-------VADSEDSFNSSEIKCKLKVVFEDFEIARMKVRPSAMREVI 713

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            LEVPKVKWED+GGQ EVK QLME VEWPQKHQ+AFKRIGTRPP G+L+FGPPGCSKTLMA
Sbjct: 714  LEVPKVKWEDIGGQMEVKAQLMETVEWPQKHQDAFKRIGTRPPAGVLLFGPPGCSKTLMA 773

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSI+FFDEIDGLA IRGK
Sbjct: 774  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDGLAVIRGK 833

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            ESDGVSVSDRVMSQLLVELDGLHQRV VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN
Sbjct: 834  ESDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 893

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRIT 1006
            E++REEIFRIHL K+PCS DV+ R+LA LS+GCTGADISLICRE+A+ A+EENL+AS I+
Sbjct: 894  ESEREEIFRIHLCKVPCSPDVSTRKLASLSQGCTGADISLICRESALLALEENLEASVIS 953

Query: 1007 MQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMWTLIKSI 1066
            MQHL+TA RHV+PSE   Y+ELS++FQRLV S+++  E     + S+S   + W L+KS 
Sbjct: 954  MQHLETAARHVKPSETAPYRELSSRFQRLVCSSSQ--EVNVVCQQSRSNWFSFWPLVKSA 1011

Query: 1067 SLFLCRF 1073
             L   RF
Sbjct: 1012 VLLFSRF 1018


>gi|357509263|ref|XP_003624920.1| AAA family ATPase CDC48 subfamily [Medicago truncatula]
 gi|355499935|gb|AES81138.1| AAA family ATPase CDC48 subfamily [Medicago truncatula]
          Length = 1046

 Score =  981 bits (2535), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/1044 (53%), Positives = 703/1044 (67%), Gaps = 94/1044 (9%)

Query: 14   RLSNSDLSASPRTPSLTSAAWDSEEDFRTSLEDASTRYPTLIGKSAFIGQITDIETD--- 70
            RL +S   A+   P  T+   DS       L+ AS  +P+ I  SA + +ITD+E+    
Sbjct: 21   RLQSSIPDAASTPPRTTTIQLDS------LLQHASRIFPSFISHSALVAEITDVESADSL 74

Query: 71   SRGC-KIWLSESSMLASSLAPGSLVSVSLPVSGKRF--SNGFPLSSLADECVQQFGNESL 127
            S+G  KIWLSESSM+ASSLAPGSLVSVS+P S K    S+ FPL+SL +       +++L
Sbjct: 75   SKGAAKIWLSESSMVASSLAPGSLVSVSIPSSSKGIAESHNFPLTSLTNGLET---SKTL 131

Query: 128  DQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGRTVFVYTIQSQFLTGLV 187
            D   +  G+YFA+ATVFPS KVLK+ VRLS +L + MG P  G  VFV+ +  Q L    
Sbjct: 132  DD--DVAGNYFAIATVFPSNKVLKDGVRLSLNLFFAMGRPPLGTCVFVHPVHKQSLI--- 186

Query: 188  NGSNKPYNGEANHFSVCTCQELHLELVPLRSR--LKMNGAAFSKMKVSAERSRDQLGNGI 245
                  YN          C+E++L+L   +S   LK+N +    + +S  +SR Q  N I
Sbjct: 187  ------YN----------CKEIYLQLATCKSGTPLKVNNSP--SLDLSKSKSRVQTENDI 228

Query: 246  DSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLEDESAIKLLQ 305
             +SPKTP Y  R S+ SV   +SPV EDS S   + N  +V +FD+ + L +ES+ KLL+
Sbjct: 229  VASPKTPSYGSRFSNDSV--YSSPVYEDSASSVTDNNGQSVTSFDVSKALGNESSKKLLE 286

Query: 306  TCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPADLT----NERSQPQVTES--- 358
            TCA   LYSR LL GNLV V MLSE  IF V+   K+   +     N  S   + +S   
Sbjct: 287  TCATGLLYSRCLLLGNLVTVQMLSEFFIFRVMDIKKVSTTIYDYSLNGSSNLNLKDSEMA 346

Query: 359  MDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSK 418
            +++ + AF +N ETKV+L  P N   +   +  L   +++          +ISKLGGLSK
Sbjct: 347  VENVNLAFTVNWETKVFLSLPSNVAFEESIQRDLSCLKLD----------NISKLGGLSK 396

Query: 419  EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGP 478
            E  +LK II S S+   LS  G + T+GVLLHGPPGTGKTSLA+LCAHD+GVN F++NGP
Sbjct: 397  EEILLKRII-SFSLNDILSRFGQQNTRGVLLHGPPGTGKTSLAQLCAHDAGVNFFSINGP 455

Query: 479  EVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLM 538
            E+V++NYGESE+AL EVFDSA Q+APAV+FID++DAIAP RKDGGEELS+R+V TLL LM
Sbjct: 456  EIVTENYGESEKALQEVFDSAIQAAPAVLFIDKIDAIAPPRKDGGEELSKRLVVTLLGLM 515

Query: 539  DGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL 598
            DG+ R +G++VIAATNR D I+PALRRPGR D+E+EI               VPS  +R 
Sbjct: 516  DGIRRNEGLVVIAATNRLDRIDPALRRPGRFDKEVEI--------------GVPSQVERG 561

Query: 599  EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLH 658
            +IL A+L  ++HSL ++++E L+  THGFVGADL  L N AAL+CLRRY++ +       
Sbjct: 562  DILRAILGEIDHSLSETQIEELASITHGFVGADLVGLRNWAALICLRRYAEQKLKKTCNA 621

Query: 659  STGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSE 718
            S+  + +      +     D S  IT S  D           + +SLL  S  L G  SE
Sbjct: 622  SSDDITKQPTPLKSATNSKDHSGIITSSVSDM---------SVASSLLLPSF-LMGETSE 671

Query: 719  IADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVG 778
            I D   +            E+   LK+   DF+KAR ++RPSAMREV LEVPKV WED+G
Sbjct: 672  IIDETPD----------HGEEEHILKVTFEDFQKARPEIRPSAMREVTLEVPKVNWEDIG 721

Query: 779  GQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFL 838
            GQ+EVK QL+EAV WPQKH++AF RIGT PPT +LMFGPPGCSKTLMARAVASEAGLNFL
Sbjct: 722  GQKEVKNQLLEAVVWPQKHRDAFTRIGTDPPTAVLMFGPPGCSKTLMARAVASEAGLNFL 781

Query: 839  AVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVM 898
            AVKGPELFSKWVGESEKAVRSLF KARANAP+IIFFDEID LA  RGK+ DGVSVSDRVM
Sbjct: 782  AVKGPELFSKWVGESEKAVRSLFDKARANAPAIIFFDEIDSLAITRGKDGDGVSVSDRVM 841

Query: 899  SQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            +QLLV+LDG+ +RV+V VIAATNRPDKIDPALLR GRFDRLLYVGPPNE DREEIF IHL
Sbjct: 842  AQLLVQLDGVLKRVDVIVIAATNRPDKIDPALLRQGRFDRLLYVGPPNEIDREEIFSIHL 901

Query: 959  RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            RK P  SDV+++ELA L++G TGADI+ ICR+AA++A+EE+ DAS +TM+H K AI+ VQ
Sbjct: 902  RKTPYDSDVSMKELAQLTDGYTGADIAHICRQAALAALEESFDASVVTMKHFKMAIKQVQ 961

Query: 1019 PSEIHSYKELSAKFQRLVHSNAEA 1042
            PSE  SY++LSAKFQR V S+  A
Sbjct: 962  PSEFQSYQKLSAKFQRAVFSDERA 985


>gi|357157131|ref|XP_003577695.1| PREDICTED: cell division cycle protein 48 homolog AF_1297-like
            [Brachypodium distachyon]
          Length = 1002

 Score =  830 bits (2145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/1091 (47%), Positives = 667/1091 (61%), Gaps = 126/1091 (11%)

Query: 1    MRSKSKKQSKAPSRLSNSDLSASPRTPSLTSAAWDSEE----DFRTSLEDASTRYPTLI- 55
            M SK KK+  A S         SPRTP   S A D       DF +    A+ RYP L+ 
Sbjct: 1    MSSKGKKKKPAASP------QPSPRTP--PSHARDGTGGYAFDFPSIAAAAAARYPALVP 52

Query: 56   --GKSAFIGQITDI--ETDSRG--CKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGF 109
              G  +F G I D+     SRG   ++WLSE +M+ + L PG LVSVSL +S  R  NGF
Sbjct: 53   GGGAGSFAGPIADVVPRGGSRGPEGRLWLSEPAMVGAGLRPGCLVSVSL-ISDSR--NGF 109

Query: 110  PLSSLADECVQQFG-NESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPL 168
            PL SL +EC + FG +   D  +N+ G  F +AT+FPS +V KN ++LS  +S  +G P 
Sbjct: 110  PLDSLFEECNRFFGLDVENDLMSNEAGMNFVIATIFPSREVQKNGIKLSWDISCMLGYPS 169

Query: 169  SGRTVFV---YTIQSQFLTGLVNGSNKPYNGEANHFSVCTCQELHLELVPLRSRLKMNGA 225
             GR++F+   YT Q+Q          K  +G    + +  C +L+L L+    ++  +G 
Sbjct: 170  VGRSLFISPIYTSQAQ----------KQIDGGEILWQIRCC-DLYLRLI--SPKVGSSGN 216

Query: 226  AFSKMKVSAERSRDQLGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSLN 285
              S+    A +S   +      SPK     PR +           S DS S S   +SL 
Sbjct: 217  DKSESDSHAVKSLMVM-----ESPKKIPSTPRRNE----------SLDSASNS--GSSLL 259

Query: 286  VDAFDIKEVLEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLV----IGANK 341
            +D    K  L DE    LLQTCA  WL+ R LL GN V + M  ++S+F+V    I  + 
Sbjct: 260  LDQATAKSALADEKINDLLQTCATRWLHGRHLLKGNYVPLSMCGKLSMFVVSHAEIDGSA 319

Query: 342  LPA------DLTNERSQPQVTESMDHESNAFVINHETKVYLY-----PPLNAVSKSLREG 390
            L A       L++    P++ ES+     +F+++  TKV+L        L +        
Sbjct: 320  LDAVHLEKNSLSSVEFSPKLGESL----ASFLVDRTTKVHLSGLSCSEELGSDKIGFTSK 375

Query: 391  TLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII---ISSSVKSTLSSLGLRP-TKG 446
              P+A IE ++          +LGGLSKE   LK++I   ++  +      L   P  KG
Sbjct: 376  YSPHADIENEDSHHD-----PRLGGLSKELKKLKEMISFSLADQIGLPRHCLDDFPRYKG 430

Query: 447  VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 506
            VLL+GPPGTGKTSLA  CA+++G NLFT+NGPE+++Q +GESEQAL+++F SA Q+APAV
Sbjct: 431  VLLYGPPGTGKTSLASSCAYNAGANLFTINGPEIITQYHGESEQALYDIFSSAKQAAPAV 490

Query: 507  VFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRP 566
            +FIDELDAIAPARKDGGEELS RMVATLL LMD +   D V++IAATNRPDSI+ ALRRP
Sbjct: 491  IFIDELDAIAPARKDGGEELSLRMVATLLKLMDEIGPNDRVILIAATNRPDSIDRALRRP 550

Query: 567  GRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHG 626
            GR D++IEI               VPSP QRL+ILH LL+G+ HSL   EVE L+ ATHG
Sbjct: 551  GRFDQDIEI--------------GVPSPGQRLDILHHLLTGVHHSLTSEEVESLAFATHG 596

Query: 627  FVGADLAALCNEAALVCLRRYSKIQTSSDVL---HSTGTLFEFEGHSDTMLQDSDCSRNI 683
            FVGADLAALCNEAAL  LRRY  ++ SS  L   H+T T        D +L    C  + 
Sbjct: 597  FVGADLAALCNEAALSALRRYVSVKESSTQLLSDHATSTEKSNGRGIDGVL---GCEVSS 653

Query: 684  TESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCAL 743
              SS   L  +   T D P                       G S  S      E    L
Sbjct: 654  LSSSLSKLTMS---TKDFPP-------------------ISKGNSTESSEPDDKEDELLL 691

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
             +   DFEKA++KVRPSAMREV+LE+PKV+WEDVGGQ  +K QL+EA++ PQK  EAF+R
Sbjct: 692  LVTKEDFEKAKIKVRPSAMREVMLELPKVRWEDVGGQARIKQQLIEAIQLPQKCPEAFER 751

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            IG RPP G+LM GPPGCSKTLMARAVASEA +NFLAVKGPELFSKWVG+SEKAVRSLF K
Sbjct: 752  IGIRPPRGLLMIGPPGCSKTLMARAVASEAKMNFLAVKGPELFSKWVGDSEKAVRSLFEK 811

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            A+ NAP+I+FFDEIDGLA  R   + G+SV+DRV++QLLVE+DGL Q V V+VIAATNRP
Sbjct: 812  AKYNAPAILFFDEIDGLAVTRSHGNSGISVADRVLAQLLVEMDGLGQNVGVSVIAATNRP 871

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            DKID ALLRPGRFDRLL V PP+E DRE+IFRIH R IPCS DV++ ELA L+EG TGAD
Sbjct: 872  DKIDIALLRPGRFDRLLDVQPPDEVDREDIFRIHTRSIPCSHDVSLNELARLTEGYTGAD 931

Query: 984  ISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEAD 1043
            I L+CREAA++A++EN D   ++  H K+AI  V+PS++  Y+EL+A+F+RLV   A+A 
Sbjct: 932  IKLVCREAAVAALDENFDILEVSSIHFKSAIDRVKPSDMKFYQELAAQFRRLVDDTAKAT 991

Query: 1044 ESGYQLRPSKS 1054
              G    P+ S
Sbjct: 992  MLGEHTGPAIS 1002


>gi|242070735|ref|XP_002450644.1| hypothetical protein SORBIDRAFT_05g008540 [Sorghum bicolor]
 gi|241936487|gb|EES09632.1| hypothetical protein SORBIDRAFT_05g008540 [Sorghum bicolor]
          Length = 988

 Score =  812 bits (2098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/1011 (47%), Positives = 629/1011 (62%), Gaps = 109/1011 (10%)

Query: 50   RYPTLI---GKSAFIGQITDI--ETDSRGCKI---WLSESSMLASSLAPGSLVSVSLPVS 101
            ++P L+   G   F G + ++     SRG ++   WLSE++M+ + + PG LVSVSL  S
Sbjct: 53   QFPALVPRGGDGCFAGTVAEVAPRDGSRGGRLGRLWLSEAAMVGAGMRPGCLVSVSLIWS 112

Query: 102  GKRFSNGFPLSSLADECVQQFGNESLDQTA-NQVGSYFALATVFPSCKVLKNEVRLSSSL 160
                 + FPL +L +EC + F  +  +     + G  F +ATV PS +V KN ++LS  L
Sbjct: 113  SSDQLDAFPLVNLFEECSRFFDLDLDNDLLYGEAGKNFVVATVLPSREVRKNGIKLSWDL 172

Query: 161  SYTMGCPLSGRTVFVY---TIQSQFLTGLVNGSNKPYNGEANH-FSVCTCQELHLELVPL 216
            +  +G PL GR++F+    T+Q+            P   + +H   V  C++L+L LVP 
Sbjct: 173  ACVLGHPLVGRSLFISPLCTLQA------------PKRSDDSHILRVMKCKDLYLSLVP- 219

Query: 217  RSRLKMNGAAFSKMKVSAERSRDQLGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVS 276
               +  +    S+     ERS   +       P TP+++                E    
Sbjct: 220  -PNVGSSNGIESESDHHPERST-MVMETPKKGPSTPLHK---------------KESHHF 262

Query: 277  KSLNWNSLNVDAFDIKEVLEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLV 336
             S +  S+ +D       L DE    LLQT A  WL  R LL GN V + +  ++S+F+V
Sbjct: 263  PSNSGCSMCLDPTTAISALADEKVNDLLQTSAVRWLNGRHLLKGNFVPLSVCGKLSLFVV 322

Query: 337  IGANKLPADLTNERSQPQVTESMDHESNA------------FVINHETKVYLYPPLNAVS 384
            +GA        +  S   + E  +  SNA            F+++  TKV+L   +    
Sbjct: 323  MGAE------PDSSSHDVLCEKGNTLSNAEDSTKSTETPVLFLVDGTTKVHLSDSVCTKQ 376

Query: 385  KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPT 444
              L +  LP+   E+ + +     ++  LGGLSKE A +K II      S    +GL   
Sbjct: 377  LDLDKLGLPSELSEYGDKRNEDSNNVPTLGGLSKESATIKGII----SFSLADQIGLPRY 432

Query: 445  KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
            KG+LL+GPPGTGKTSLA  CA+D+GVNLFT+NGPE++S +YGESEQ+L++VF SA Q+AP
Sbjct: 433  KGILLYGPPGTGKTSLASSCAYDAGVNLFTINGPEIISHHYGESEQSLYDVFSSAKQAAP 492

Query: 505  AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
            AV+FIDELDAIAP+RKDG EELS RMVATLL LMD +  +D VL+IAATNRPDSI+PALR
Sbjct: 493  AVIFIDELDAIAPSRKDGSEELSIRMVATLLKLMDEIGPSDRVLLIAATNRPDSIDPALR 552

Query: 565  RPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT 624
            RPGRLD+EIEI               VPSP QR++IL  LL G+ HSL + E+E +++AT
Sbjct: 553  RPGRLDKEIEI--------------GVPSPGQRMDILRRLLIGVHHSLSNEEIESIALAT 598

Query: 625  HGFVGADLAALCNEAALVCLRRYSKI-QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNI 683
            HGFVGADLAALCNEAAL  LR Y  + + S+  L   G  F+             C+   
Sbjct: 599  HGFVGADLAALCNEAALSALRCYISVKENSTQQLGHPGCSFD------------KCNSQD 646

Query: 684  TESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCAL 743
            TE                P+SL SS   L  +  ++A     G +  S   +       L
Sbjct: 647  TED---------------PSSLSSSFSQLTMSSDDVA--CMKGSNIKSSESYDDTNEIPL 689

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
             + + DF+KA+ KVRPSAMREVILE+PKV WEDVGGQ  VK QL+EA++ PQK  EAF+R
Sbjct: 690  LVTIKDFDKAKTKVRPSAMREVILELPKVCWEDVGGQFSVKEQLIEAIQLPQKCPEAFER 749

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G RPP G+LM GPPGCSKTLMARA ASEA LNFLAVKGPELFSKWVG+SEKAVRSLFAK
Sbjct: 750  LGIRPPRGLLMIGPPGCSKTLMARAAASEAKLNFLAVKGPELFSKWVGDSEKAVRSLFAK 809

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            ARANAP+I+FFDEIDGLA  RG+ +DG SV+DRV+SQLLVE+DGL QRV VTVIAATNRP
Sbjct: 810  ARANAPAILFFDEIDGLAVTRGQGNDGTSVADRVLSQLLVEMDGLDQRVGVTVIAATNRP 869

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            DKID ALLRPGRFDR+L V PPNE DR +IFRIH+R +PCS+D+N+ ELA L+EG TGAD
Sbjct: 870  DKIDSALLRPGRFDRVLDVQPPNEADRADIFRIHIRSMPCSADMNLNELARLTEGYTGAD 929

Query: 984  ISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            I LICREAA++A++E+ D   + M+H K+A+   +PS++  ++EL+ +F+R
Sbjct: 930  IKLICREAAVAALDESFDIREVAMRHFKSAVSRTRPSDVKFFEELAKQFRR 980


>gi|77549300|gb|ABA92097.1| ATPase, AAA family protein, expressed [Oryza sativa Japonica Group]
 gi|125576618|gb|EAZ17840.1| hypothetical protein OsJ_33389 [Oryza sativa Japonica Group]
          Length = 1001

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/1014 (47%), Positives = 638/1014 (62%), Gaps = 101/1014 (9%)

Query: 50   RYPTLI---GKSAFIGQITDI--ETDSRG--CKIWLSESSMLASSLAPGSLVSVSLPVSG 102
            R+P L+   G+  F G + ++     SRG   ++WLSE +M+ ++L PG LVSVSL  S 
Sbjct: 54   RHPALVPRGGEGCFSGTVAEVAPRGRSRGGEARLWLSEPAMVGAALRPGCLVSVSLISSN 113

Query: 103  KRFSNGFPLSSLADECVQQFG-NESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLS 161
            +  S+G PL SL +EC + F  +   D   N+ G  F +A VFPS +V KN ++LS  L+
Sbjct: 114  RGRSDGSPLDSLFEECNEFFDLDVDNDLMPNEAGRNFVIAKVFPSREVQKNGIKLSWDLA 173

Query: 162  YTMGCPLSGRTVF---VYTIQSQFLTGLVNGSNKPYNGEANHFSVCTCQELHLELVPLRS 218
             ++G P  G ++F   +YT Q+   T  V+              V  C  L+L  VP + 
Sbjct: 174  CSLGNPSVGCSLFFSPLYTSQAPKETDSVD-----------ILRVIKCSNLYLSFVPAK- 221

Query: 219  RLKMNGAAFSKMKVSAERSRDQLGNG-IDSSPK--TPMYQPRLSSQSVNQLASPVSEDSV 275
                     S  ++ +E     + NG +  SPK  + +   R  S  +   + P      
Sbjct: 222  -------VGSSSEIESESVHHPIRNGMVIESPKRNSSVLSGRNESYDIASHSGP------ 268

Query: 276  SKSLNWNSLNVDAFDIKEVLEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFL 335
                   SL +D    +  L DE   +LLQTCA+ WL  R LL  N V + M  ++S+F+
Sbjct: 269  -------SLCLDPATARSSLADEKINELLQTCASRWLSGRHLLKANYVPLLMCGKLSMFI 321

Query: 336  VIGA--NKLPADLTNER----SQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLRE 389
            V+GA  +    D+ +++    S  +++        +F+++  TKV+L  P+ +   +  +
Sbjct: 322  VMGAEVDGSAPDVVHDKDKLPSNEEISGKFGEAPVSFLVDRTTKVHLSGPVCSEEIAFVK 381

Query: 390  GTLPNAQIEFQNVQATVEQDIS-KLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTK--- 445
               P+A   F+      + +   +LGGLSKE   +K+II S S+K     +GL+  K   
Sbjct: 382  PG-PSAHNSFRTDARNGDFNHGPRLGGLSKESKEIKEII-SFSIKD---QIGLQRVKDNL 436

Query: 446  ---GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
               G+LL GPPGTGKTSLA  CA+D GVNLFT+NGPE++SQ YGESEQAL++VF SA Q+
Sbjct: 437  WYRGILLSGPPGTGKTSLATSCAYDEGVNLFTINGPEIISQYYGESEQALYDVFSSAKQA 496

Query: 503  APAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPA 562
            APAV+FIDELDAIAP RKDG EELS R+V TLL L+D +   D VLVIAATNRPDSI+PA
Sbjct: 497  APAVIFIDELDAIAPERKDGSEELSIRIVVTLLKLIDAMSPRDRVLVIAATNRPDSIDPA 556

Query: 563  LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM 622
            L+RP RLDR+IEI               VPSP QRL+IL  LL G++HSL   ++E L+ 
Sbjct: 557  LKRPERLDRKIEI--------------GVPSPVQRLDILQHLLVGVQHSLSCEQLESLAS 602

Query: 623  ATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRN 682
            ATHGFVGADLAALCNEAAL  LRRY  ++ SS  L          G+ D   +  D  R 
Sbjct: 603  ATHGFVGADLAALCNEAALSALRRYISLKKSSQQL----------GYYDNNAEKPDI-RE 651

Query: 683  ITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCA 742
            I +     ++S +   S L  S+       R   +E     +NG S     +        
Sbjct: 652  INDPLGYQVNSIASSLSKLTMSVDDVLCTSRSNDTE-----NNGSSGKKDDLL------- 699

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L +   DFEKA++KVRPSAMREV LE+PK++WEDVGGQ  +K QL+EA+E PQK+ +AF+
Sbjct: 700  LLVTTEDFEKAKIKVRPSAMREVSLELPKIRWEDVGGQVRIKEQLIEAIELPQKNPKAFE 759

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP G+LM GPPGCSKTLMARAVASEA LNFLAVKGPELFSKWVG+SEKAVRSLFA
Sbjct: 760  NMGVSPPRGLLMIGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGDSEKAVRSLFA 819

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR NAP+I+FFDEIDGLA  RG+E+D VSV DRV+SQLLVE+DGL QR+ VTVIAATNR
Sbjct: 820  KARDNAPAILFFDEIDGLAVTRGRENDSVSVGDRVLSQLLVEMDGLEQRIGVTVIAATNR 879

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PDKID ALLRPGRFDRLL V PP+E DR +IFRIH R +PCS DVN+ ELA L+EG TGA
Sbjct: 880  PDKIDCALLRPGRFDRLLDVQPPDEADRVDIFRIHTRNMPCSHDVNLNELARLTEGYTGA 939

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLV 1036
            DI L+CREAAI+A++EN+D   + ++H K+AI  ++PS++  Y+EL+A++ R V
Sbjct: 940  DIKLVCREAAIAALDENIDIPEVEIRHFKSAISRIKPSDVKFYQELAAQYSRFV 993


>gi|413920771|gb|AFW60703.1| hypothetical protein ZEAMMB73_346476 [Zea mays]
          Length = 985

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/1062 (46%), Positives = 639/1062 (60%), Gaps = 120/1062 (11%)

Query: 5    SKKQSKAPSRLSNSDLSASPRTPSLTSAAWDSEEDFRTSLEDAST------RYPTLI--- 55
            SK + K PS    +    SPRTPS   +A     D   S++  S       ++P L+   
Sbjct: 4    SKGKKKNPS----TSPRPSPRTPSSCPSAGSGTGDGERSVDLPSIAAAAAEQFPALVPRG 59

Query: 56   GKSAFIGQITDI--ETDSRGCKI---WLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFP 110
            G   F G + ++     SRG ++   WLSE++M+ + + PG  VSVSL  S     +GFP
Sbjct: 60   GSGYFAGIVAEVAPRDGSRGGRLGRLWLSEAAMVGAGMRPGCFVSVSLISSSSDQLDGFP 119

Query: 111  LSSLADECVQQFGNESLDQTA-NQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLS 169
            L +L +EC + F  +  +     + G  F +ATV PS +V KN ++LS  L+  +G P  
Sbjct: 120  LINLFEECNRFFDLDLDNDLLYGEAGKNFVVATVLPSREVPKNGIKLSWDLACVLGHPFV 179

Query: 170  GRTVFVY---TIQSQFLTGLVNGSNKPYNGEANH-FSVCTCQELHLELVPLRSRLKMNGA 225
            GR++F+    T+Q+            P   +  H   V  C+ L+L LVP    +  +  
Sbjct: 180  GRSLFICPLCTLQA------------PKRSDDVHILRVMKCKNLYLSLVP--PNVGSSKG 225

Query: 226  AFSKMKVSAERSRDQLGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSLN 285
              S+     ERS   +       P TP+ +                E     S N +S+ 
Sbjct: 226  IESESDYHPERSA-MVMETPKRGPSTPLRK---------------KESHHFASNNGSSMC 269

Query: 286  VDAFDIKEVLEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPAD 345
            +D    +  L DE   +LL T A  WL  R LL GN V + +  ++S+F+V+GA      
Sbjct: 270  LDPTTARSALADEKINELLHTSALWWLNGRHLLKGNFVPLSICGKLSLFVVMGAE----- 324

Query: 346  LTNERSQPQVTESMDHESNA------------FVINHETKVYLYPPLNAVSKSLREGTLP 393
              +  SQ  + E+ +  SNA            F+++  TKV+L   +        +  LP
Sbjct: 325  -PDSSSQDVLYENGNTLSNAEDSTKSQENPVLFLVDRTTKVHLSDSVCTKQLDSDKPGLP 383

Query: 394  NAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPP 453
            +   E+ + +         LGGLSKE A +K II      S    +GL   KG+LL+GPP
Sbjct: 384  SEPHEYDDKRNADFNHSPTLGGLSKESATIKGII----SFSLADQIGLPRYKGILLYGPP 439

Query: 454  GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
            GTGKTSLA  CA+D+GVNLFT+NGPE++S  YGESEQ+L++VF SA Q+APAV+FIDELD
Sbjct: 440  GTGKTSLASSCAYDAGVNLFTINGPEIISHYYGESEQSLYDVFTSAKQAAPAVIFIDELD 499

Query: 514  AIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREI 573
            AIAP+RKDG E LS RMVATLL LMD +  +D VL+IAATNRPDSI+PALRRPGRLD+EI
Sbjct: 500  AIAPSRKDGSEALSIRMVATLLKLMDEIGPSDRVLLIAATNRPDSIDPALRRPGRLDKEI 559

Query: 574  EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
            EI               VPSP QR++IL  LL G+ HSL + EVE +++ATHGFVGADLA
Sbjct: 560  EI--------------GVPSPGQRMDILRHLLIGVHHSLTNEEVESVALATHGFVGADLA 605

Query: 634  ALCNEAALVCLRRYSKIQTSS-DVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLD 692
            A+CNEAAL  LRRY  ++ +S   L   G  F      DT     D S   +  S+  + 
Sbjct: 606  AVCNEAALSALRRYISLKENSIQQLGHPGCSFYKCNSQDT----EDSSSLSSSFSKLTMS 661

Query: 693  SASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEK 752
            S   C                           NG +  S   +       L +   DF+K
Sbjct: 662  SYVACM--------------------------NGGNIKSSESYDDTDEIPLYVTNKDFDK 695

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            A+ KVRPSAMREVILE+PKV+WEDVGGQ  VK QL+EA++ PQK  EAF+R+G RPP G+
Sbjct: 696  AKTKVRPSAMREVILELPKVRWEDVGGQCSVKEQLIEAIQLPQKCPEAFERLGIRPPRGL 755

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            LM GPPGCSKTLMARA ASEA LNFLAVKGPELFSKWVG+SEKAVRSLFAKARANAP+I+
Sbjct: 756  LMIGPPGCSKTLMARAAASEAKLNFLAVKGPELFSKWVGDSEKAVRSLFAKARANAPAIL 815

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLR 932
            FFDEIDGLA  RG+E+DG SV+DRV+SQLLVE+DGL QRV VTVIAATNRPDKIDPALLR
Sbjct: 816  FFDEIDGLAVTRGQENDGTSVADRVLSQLLVEMDGLDQRVGVTVIAATNRPDKIDPALLR 875

Query: 933  PGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAA 992
            PGRFDR+L V PP+E DR +IFRIH R +PCS+D+N+ ELA L+EG TGADI LICREAA
Sbjct: 876  PGRFDRVLDVQPPDEADRADIFRIHTRSMPCSADMNLNELARLTEGYTGADIKLICREAA 935

Query: 993  ISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            ++A++E  D   + M+H  +AI   +PS++  ++EL+ +F+R
Sbjct: 936  VAALDERFDIQEVAMRHFNSAIDRTKPSDVKFFQELAKQFRR 977


>gi|218185465|gb|EEC67892.1| hypothetical protein OsI_35562 [Oryza sativa Indica Group]
          Length = 990

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/1012 (46%), Positives = 626/1012 (61%), Gaps = 108/1012 (10%)

Query: 50   RYPTLI---GKSAFIGQITDI--ETDSRG--CKIWLSESSMLASSLAPGSLVSVSLPVSG 102
            R+P L+   G+  F G + ++     SRG   ++WLSE +M+ ++L PG LVSVSL  S 
Sbjct: 54   RHPALVPRGGEGCFSGTVAEVAPRGRSRGGEARLWLSEPAMVGAALRPGCLVSVSLISSN 113

Query: 103  KRFSNGFPLSSLADECVQQFG-NESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLS 161
            +  S+G PL SL +EC + F  +   D   N+ G  F +A VFPS +V KN ++LS  L+
Sbjct: 114  RGRSDGSPLDSLFEECNEFFDLDVDNDLMPNEAGRNFVIAKVFPSREVQKNGIKLSWDLA 173

Query: 162  YTMGCPLSGRTVFVYTIQSQFLTGLVNGSNKPYNGEA-NHFSVCTCQELHLELVPLRSRL 220
             ++G P  G ++F  T+ +         S  P   ++ +   V  C  L+L  VP +   
Sbjct: 174  CSLGNPSVGCSLFFSTLYT---------SQAPKETDSVDILRVIKCSNLYLSFVPAK--- 221

Query: 221  KMNGAAFSKMKVSAERSRDQLGNG-IDSSPK--TPMYQPRLSSQSVNQLASPVSEDSVSK 277
                   S  ++ +E     + NG +  SPK  + +   R  S  +   + P        
Sbjct: 222  -----VGSSSEIESESVHHPIRNGMVIESPKRNSSVLSGRNESYDIASHSGP-------- 268

Query: 278  SLNWNSLNVDAFDIKEVLEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVI 337
                 SL +D    +  L DE   +LLQTCA+ WL  R LL  N V + M  ++S+F+V+
Sbjct: 269  -----SLCLDPATARSSLADEKINELLQTCASRWLSGRHLLKANYVPLLMCGKLSMFIVM 323

Query: 338  GA--NKLPADLTNER----SQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGT 391
            GA  +    D+ +++    S  +++        +F+++  TKV+L  P+ +   +  +  
Sbjct: 324  GAEVDGSAPDVVHDKDKLPSNEEISGKFGEAPVSFLVDRTTKVHLSGPVCSEEIAFVKPG 383

Query: 392  LPNAQIEFQNVQATVEQDIS-KLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTK----- 445
             P+A   F+      + +   +LGGLSKE   +K+II S S+K     +GL+  K     
Sbjct: 384  -PSAHNSFRTDARNGDFNHGPRLGGLSKESKEIKEII-SFSIKD---QIGLQRVKDNLWY 438

Query: 446  -GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
             G+LL GPPGTGKTSLA  CA+D GVNLFT+NGPE++SQNYGESEQAL++VF SA Q+AP
Sbjct: 439  RGILLSGPPGTGKTSLATSCAYDEGVNLFTINGPEIISQNYGESEQALYDVFSSAKQAAP 498

Query: 505  AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
                          RKDG EELS R+V TLL L+D +   D VLVIAATNRPDSI+PAL+
Sbjct: 499  GC-----------ERKDGSEELSIRIVVTLLKLIDAMSPRDRVLVIAATNRPDSIDPALK 547

Query: 565  RPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT 624
            RP RLDR+IEI               VPSP QRL+IL  LL G++HSL   ++E L+ AT
Sbjct: 548  RPERLDRKIEI--------------GVPSPVQRLDILQHLLVGVQHSLSCEQLESLASAT 593

Query: 625  HGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNIT 684
            HGFVGADLAALCNEAAL  LRRY  ++ SS  L          G+ D   +  D  R I 
Sbjct: 594  HGFVGADLAALCNEAALSALRRYISLKKSSQQL----------GYYDNNAEKPDI-REIN 642

Query: 685  ESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALK 744
            +     ++S +   S L  S+       R   +E     +NG S     +        L 
Sbjct: 643  DPLGYQVNSIASSLSKLTMSVDDVLCTTRSNDTE-----NNGSSGKKDDLL-------LL 690

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            +   DFEKA++KVRPSAMREV LE+PK++WEDVGGQ  +K QL+EA+E PQK+ +AF+ +
Sbjct: 691  VTTEDFEKAKIKVRPSAMREVSLELPKIRWEDVGGQVRIKEQLIEAIELPQKNPKAFENM 750

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G  PP G+LM GPPGCSKTLMARAVASEA LNFLAVKGPELFSKWVG+SEKAVRSLFAKA
Sbjct: 751  GVSPPRGLLMIGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGDSEKAVRSLFAKA 810

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R NAP+I+FFDEIDGLA  RG+E+D VSV DRV+SQLLVE+DGL QR+ VTVIAATNRPD
Sbjct: 811  RDNAPAILFFDEIDGLAVTRGRENDSVSVGDRVLSQLLVEMDGLEQRIGVTVIAATNRPD 870

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
            KID ALLRPGRFDRLL V PP+E DR +IFRIH R +PCS DVN+ ELA L+EG TGADI
Sbjct: 871  KIDCALLRPGRFDRLLDVQPPDEADRVDIFRIHTRNMPCSHDVNLNELARLTEGYTGADI 930

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLV 1036
             L+CREAAI+A++EN+D   + ++H K+AI  ++PS++  Y+EL+A++ R V
Sbjct: 931  KLVCREAAIAALDENIDIPEVEIRHFKSAISRIKPSDVKFYQELAAQYSRFV 982


>gi|326504648|dbj|BAK06615.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 920

 Score =  777 bits (2007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/964 (47%), Positives = 602/964 (62%), Gaps = 87/964 (9%)

Query: 107  NGFPLSSLADECVQQFG-NESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMG 165
            +GFPL SL +EC + F  +   D  +N+ G  F  A V PSC+V KN+++LS  L+ T+G
Sbjct: 25   DGFPLDSLFEECARFFDLDVDNDLISNEAGVNFVTAKVSPSCEVQKNDIKLSWDLACTLG 84

Query: 166  CPLSGRTVFVYTIQSQFLTGLVNGSNKPYNGEANHF-SVCTCQELHLELVPLRSRLKMNG 224
             P+ GR + +  + +         S  P   +   F  V  C +L+L LVP     K+  
Sbjct: 85   YPVIGRPLLISPLYT---------SQAPKQTDGGEFLRVIKCSDLYLSLVPP----KVAP 131

Query: 225  AAFSKMKVSAERSRDQLGNGIDSSPKTPMYQPRLSSQSVNQLASPVSEDSVSKSLNWNSL 284
             + +K +      R+ +   ++S  + P   P  +           S D  S S   +SL
Sbjct: 132  PSRNKSESDCHPVRNVMF--VESPKRIPSTSPCRNE----------SHDGASYS--GSSL 177

Query: 285  NVDAFDIKEVLEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPA 344
             +D    K VL DE    LLQ  A+ WL  R L+ GN V +P+  ++S+F+V+ A    +
Sbjct: 178  CLDRATAKSVLADEKINDLLQISASRWLGGRHLMKGNYVPLPICGKLSMFVVLRAETDGS 237

Query: 345  DL------TNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAV-SKSLREGTLPNAQI 397
             L      +N  S  +V+  +      F+++  TKV+L    ++  S S + G LP   I
Sbjct: 238  ALDVVHEKSNSMSDAKVSVKLVETPALFLVDRTTKVHLSDLSSSKESGSDKLGFLPEYSI 297

Query: 398  EFQNVQATVEQDISKLGGLSKEYAILKDII---ISSSVKSTLSSLGLRP-TKGVLLHGPP 453
                       D  +LGGLS+  A +K++I   ++  +   ++ L   P  KG+LL+GPP
Sbjct: 298  CADTGNEDTNHD-QRLGGLSEVSAKVKEMISFSLADQICLPMNGLHDLPRYKGILLYGPP 356

Query: 454  GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
            GTGKTSLA  CA+D G NLFT+NGPE++SQ +GESEQAL++ F SA Q+APAV+FIDELD
Sbjct: 357  GTGKTSLASSCAYDLGANLFTINGPEIISQYHGESEQALYDAFTSAKQAAPAVIFIDELD 416

Query: 514  AIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREI 573
            AIAPARKDGGEELS RMVATLL LMD + R D V++IAATNR +SI+ AL RPGR D+EI
Sbjct: 417  AIAPARKDGGEELSLRMVATLLKLMDEIGRNDRVILIAATNRLESIDRALLRPGRFDQEI 476

Query: 574  EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
            EI               VPSP QRL+ILH LLSG+ HSL   EVE L+ ATHGFVGADLA
Sbjct: 477  EI--------------GVPSPGQRLDILHLLLSGVHHSLTSDEVESLAFATHGFVGADLA 522

Query: 634  ALCNEAALVCLRRYSKI-QTSSDVLHSTGTLFEFEGHSDTMLQDSD--CSRNITESSRDC 690
            ALCNEAAL  LRRY  + ++S+  L    T  E     +T +Q+ D      I+  S   
Sbjct: 523  ALCNEAALSALRRYISVKESSTQPLGDRATNAE-----NTNIQEFDGLLGHEISSLSSSL 577

Query: 691  LDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELV-- 748
                 P T D        S   RG + E ++              + +K   L L +   
Sbjct: 578  SKLTMP-TEDY-------SWTNRGDIIESSE--------------LDDKKDELLLLVTKD 615

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A+MKVRPSAMREV+LE+PKV+WEDVGGQ  +K QL+EA++ PQK  +AF+R+G RP
Sbjct: 616  DFGQAKMKVRPSAMREVMLELPKVQWEDVGGQARIKKQLIEAIQLPQKCPDAFERLGIRP 675

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+LM GPPGCSKTLMARAVASEA +NFLAVKGPELFSKWVG+SEKAVRSLFAKA+ NA
Sbjct: 676  PRGLLMIGPPGCSKTLMARAVASEAKMNFLAVKGPELFSKWVGDSEKAVRSLFAKAKDNA 735

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+FFDEIDGLA  RG  S+G+SV+DRV+SQLL E+DGL Q++ VTVIAATNRPDKID 
Sbjct: 736  PAILFFDEIDGLAVTRGHGSNGISVADRVLSQLLQEMDGLDQKIGVTVIAATNRPDKIDI 795

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDRLL V PP+E DRE+IFRIH R  PC  DVN+ ELA L+EG TGADI L+C
Sbjct: 796  ALLRPGRFDRLLDVQPPDEADREDIFRIHTRSTPCRHDVNLNELARLTEGYTGADIKLVC 855

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQ 1048
            REAA++A++EN D   +   H K+AI  V PS++  Y+EL+A+F+RLV    +    G  
Sbjct: 856  REAAVAALDENFDIPEVATTHFKSAIDQVTPSDMKFYQELAARFRRLVDDTDKETMPGTH 915

Query: 1049 LRPS 1052
              P+
Sbjct: 916  TEPA 919


>gi|297741681|emb|CBI32813.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/653 (61%), Positives = 487/653 (74%), Gaps = 32/653 (4%)

Query: 1   MRSKSKKQSKAPSRLSNSDLSASPRTPSLTSAAWD---SEEDFRTSLEDASTRYPTLIGK 57
           M SK+KK SK+ S+LS SD S SP   S+ +   D   SEED    L++AS++ P+LIGK
Sbjct: 1   MPSKTKKHSKSLSKLSYSDKSESPSVSSVLTPPPDLEISEEDLLRYLDEASSKCPSLIGK 60

Query: 58  SAFIGQITDIETDSRGCKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFPLSSLADE 117
           SAFIG++T ++ DS+GCKIWLSE SM+A +LAPGS VSVSL  S K+FSNGFPLSSL DE
Sbjct: 61  SAFIGRVTGVDPDSKGCKIWLSEPSMVAFNLAPGSTVSVSLASSKKKFSNGFPLSSLTDE 120

Query: 118 CVQQFGNESLDQTANQVGSYFALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGRTVFVYT 177
             + F  +S ++   + G+YFALATVFPSCKVLKN VRLS +L +TMG P S R VFVY 
Sbjct: 121 STRHFQVDSGNKMPGEAGNYFALATVFPSCKVLKNGVRLSLNLYHTMGSPASARIVFVYL 180

Query: 178 IQSQFLTGLVNGSNKPYNGEANHFSVCTCQELHLELVPLRSRLKMNGAAFSKMKVSAERS 237
           IQSQ +TG VNGS K ++   N  S+  C+EL+LE++P ++   +N    S ++VS E +
Sbjct: 181 IQSQSVTGFVNGSRKSHSTTINGLSLYKCKELYLEMIPSKNGSTVNSDMQSTVQVSTETT 240

Query: 238 RDQLGNGIDSSPKTPM-YQPRLSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLE 296
             Q+ NG  SSPKTP+ YQ +L S + NQL SP+ +DSVS   N N+    +FDI EVL 
Sbjct: 241 NYQVSNGAASSPKTPVSYQSKLISPNSNQLTSPICDDSVSSLSNPNNKIFASFDITEVLG 300

Query: 297 DESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVT 356
           DE+A KLLQ+CAASWLYSRSLL GNLV +P+LSE+  F V GA KL  D           
Sbjct: 301 DETAKKLLQSCAASWLYSRSLLTGNLVTIPILSELCTFCVRGAIKLSPD----------- 349

Query: 357 ESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGL 416
             M H  +A V++ ETKVYLY P N+ S++ ++G  P+ ++EF+N +A V   + KLGGL
Sbjct: 350 --MSHVDDACVVDRETKVYLYLPSNSSSETPQKGRPPHVELEFKNFKANVGSAV-KLGGL 406

Query: 417 SKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVN 476
           S+EYA+LKDIIIS+SVK+TLSS+GLR TKGVLLHGPPGTGKTSLA+LC  D+GVNLF+VN
Sbjct: 407 SEEYAVLKDIIISTSVKNTLSSMGLRTTKGVLLHGPPGTGKTSLAQLCICDAGVNLFSVN 466

Query: 477 GPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLN 536
           G E+VSQ YGESEQALHE+FDSASQ+APAVVFIDELDAIAPARKDGGEELS R+VATLLN
Sbjct: 467 GAEIVSQYYGESEQALHEIFDSASQAAPAVVFIDELDAIAPARKDGGEELSHRIVATLLN 526

Query: 537 LMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ 596
           LMDG+ RTDG+LVIAATNRPDSIEPALRRPGRLDRE+EI               VPSP Q
Sbjct: 527 LMDGISRTDGILVIAATNRPDSIEPALRRPGRLDREMEI--------------GVPSPGQ 572

Query: 597 RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           R +IL  LLS ME+SL D +++ L+  THGFVGADLAALCNEAALVCLRRY K
Sbjct: 573 RYDILLNLLSEMENSLSDMQIQQLATVTHGFVGADLAALCNEAALVCLRRYVK 625



 Score =  573 bits (1478), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 274/326 (84%), Positives = 296/326 (90%)

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
            F+ E+ C L +   DFEKARMK+RPSAMREVILEVP+VKWEDVGGQ EVK QLMEAVEWP
Sbjct: 627  FIMEEECMLVVTFEDFEKARMKIRPSAMREVILEVPRVKWEDVGGQNEVKAQLMEAVEWP 686

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
            QKHQ+AFKRIGTRPPTG+L+FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE
Sbjct: 687  QKHQDAFKRIGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 746

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNV 914
            KAVRSLFAKARANAPSIIFFDEIDGLA IRGKESDGVSV+DRVMSQLLVELDGLHQRV+V
Sbjct: 747  KAVRSLFAKARANAPSIIFFDEIDGLAVIRGKESDGVSVADRVMSQLLVELDGLHQRVDV 806

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC 974
            TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE+DR +IF IHL KIP SSDV+I ELA 
Sbjct: 807  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNESDRADIFHIHLCKIPFSSDVSIGELAF 866

Query: 975  LSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            L+EG TGADISLICREAAI+AIE+NLDAS ITM+HLKTAIR VQPSE+ SY+ELS KFQR
Sbjct: 867  LTEGYTGADISLICREAAIAAIEDNLDASEITMEHLKTAIRQVQPSELQSYQELSTKFQR 926

Query: 1035 LVHSNAEADESGYQLRPSKSIGSNMW 1060
            LVHS+ + DESG  LR SKS    +W
Sbjct: 927  LVHSSDKRDESGLPLRSSKSTWMPLW 952



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 135/228 (59%), Gaps = 11/228 (4%)

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G R   G+L+ GPPG  KT +A+    +AG+N  +V G E+ S++ GESE+A+  +F  
Sbjct: 429  MGLRTTKGVLLHGPPGTGKTSLAQLCICDAGVNLFSVNGAEIVSQYYGESEQALHEIFDS 488

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            A   AP+++F DE+D +A  R  +  G  +S R+++ LL  +DG+ +   + VIAATNRP
Sbjct: 489  ASQAAPAVVFIDELDAIAPAR--KDGGEELSHRIVATLLNLMDGISRTDGILVIAATNRP 546

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGA 982
            D I+PAL RPGR DR + +G P+   R +I    L ++  S SD+ I++LA ++ G  GA
Sbjct: 547  DSIEPALRRPGRLDREMEIGVPSPGQRYDILLNLLSEMENSLSDMQIQQLATVTHGFVGA 606

Query: 983  DISLICREAAI--------SAIEENLDASRITMQHLKTAIRHVQPSEI 1022
            D++ +C EAA+        S I E      +T +  + A   ++PS +
Sbjct: 607  DLAALCNEAALVCLRRYVKSFIMEEECMLVVTFEDFEKARMKIRPSAM 654



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 122/208 (58%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G RP  GVLL GPPG  KT +AR  A ++G+N   V GPE+ S+  GESE+A+  +F  
Sbjct: 696 IGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 755

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A  +AP+++F DE+D +A  R  +  G  ++ R+++ LL  +DG+ +   V VIAATNRP
Sbjct: 756 ARANAPSIIFFDEIDGLAVIRGKESDGVSVADRVMSQLLVELDGLHQRVDVTVIAATNRP 815

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+PAL RPGR DR           LL   P   P+ + R +I H  L  +  S  D  
Sbjct: 816 DKIDPALLRPGRFDR-----------LLYVGP---PNESDRADIFHIHLCKIPFS-SDVS 860

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           +  L+  T G+ GAD++ +C EAA+  +
Sbjct: 861 IGELAFLTEGYTGADISLICREAAIAAI 888


>gi|124361201|gb|ABN09173.1| AAA ATPase, central region [Medicago truncatula]
          Length = 511

 Score =  633 bits (1633), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 327/534 (61%), Positives = 395/534 (73%), Gaps = 34/534 (6%)

Query: 507  VFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRP 566
            +FID++DAIAP RKDGGEELS+R+V TLL LMDG+ R +G++VIAATNR D I+PALRRP
Sbjct: 11   LFIDKIDAIAPPRKDGGEELSKRLVVTLLGLMDGIRRNEGLVVIAATNRLDRIDPALRRP 70

Query: 567  GRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHG 626
            GR D+E+EI               VPS  +R +IL A+L  ++HSL ++++E L+  THG
Sbjct: 71   GRFDKEVEI--------------GVPSQVERGDILRAILGEIDHSLSETQIEELASITHG 116

Query: 627  FVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITES 686
            FVGADL  L N AAL+CLRRY++ +       S+  + +      +     D S  IT S
Sbjct: 117  FVGADLVGLRNWAALICLRRYAEQKLKKTCNASSDDITKQPTPLKSATNSKDHSGIITSS 176

Query: 687  SRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLE 746
              D           + +SLL  S  L G  SEI D   +            E+   LK+ 
Sbjct: 177  VSDM---------SVASSLLLPSF-LMGETSEIIDETPD----------HGEEEHILKVT 216

Query: 747  LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
              DF+KAR ++RPSAMREV LEVPKV WED+GGQ+EVK QL+EAV WPQKH++AF RIGT
Sbjct: 217  FEDFQKARPEIRPSAMREVTLEVPKVNWEDIGGQKEVKNQLLEAVVWPQKHRDAFTRIGT 276

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
             PPT +LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF KARA
Sbjct: 277  DPPTAVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFDKARA 336

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
            NAP+IIFFDEID LA  RGK+ DGVSVSDRVM+QLLV+LDG+ +RV+V VIAATNRPDKI
Sbjct: 337  NAPAIIFFDEIDSLAITRGKDGDGVSVSDRVMAQLLVQLDGVLKRVDVIVIAATNRPDKI 396

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            DPALLR GRFDRLLYVGPPNE DREEIF IHLRK P  SDV+++ELA L++G TGADI+ 
Sbjct: 397  DPALLRQGRFDRLLYVGPPNEIDREEIFSIHLRKTPYDSDVSMKELAQLTDGYTGADIAH 456

Query: 987  ICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNA 1040
            ICR+AA++A+EE+ DAS +TM+H K AI+ VQPSE  SY++LSAKFQR V S+A
Sbjct: 457  ICRQAALAALEESFDASVVTMKHFKMAIKQVQPSEFQSYQKLSAKFQRAVFSDA 510



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 162/309 (52%), Gaps = 36/309 (11%)

Query: 342 LPADLTNERSQPQVTESMDH--ESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEF 399
           LP+ L  E S+  + E+ DH  E +   +  E      P +     ++RE TL   ++ +
Sbjct: 188 LPSFLMGETSE-IIDETPDHGEEEHILKVTFEDFQKARPEIR--PSAMREVTLEVPKVNW 244

Query: 400 QNVQATVEQDISKLGGLSKEYA--ILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGK 457
           +++            G  KE    +L+ ++     +   + +G  P   VL+ GPPG  K
Sbjct: 245 EDI------------GGQKEVKNQLLEAVVWPQKHRDAFTRIGTDPPTAVLMFGPPGCSK 292

Query: 458 TSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAP 517
           T +AR  A ++G+N   V GPE+ S+  GESE+A+  +FD A  +APA++F DE+D++A 
Sbjct: 293 TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFDKARANAPAIIFFDEIDSLAI 352

Query: 518 AR-KDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI 575
            R KDG G  +S R++A LL  +DGV +   V+VIAATNRPD I+PAL R GR DR    
Sbjct: 353 TRGKDGDGVSVSDRVMAQLLVQLDGVLKRVDVIVIAATNRPDKIDPALLRQGRFDR---- 408

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                  LL   P   P+   R EI    L    +   D  ++ L+  T G+ GAD+A +
Sbjct: 409 -------LLYVGP---PNEIDREEIFSIHLRKTPYD-SDVSMKELAQLTDGYTGADIAHI 457

Query: 636 CNEAALVCL 644
           C +AAL  L
Sbjct: 458 CRQAALAAL 466


>gi|147798666|emb|CAN61215.1| hypothetical protein VITISV_037032 [Vitis vinifera]
          Length = 575

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 298/542 (54%), Positives = 379/542 (69%), Gaps = 37/542 (6%)

Query: 1   MRSKSKKQSKAPSRLSNSDLSASPRTPSLTSAAWD---SEEDFRTSLEDASTRYPTLIGK 57
           M SK+KK SK+ S+LS SD S SP   S+ +   D   SEED    L++AS++ P+LIGK
Sbjct: 1   MPSKTKKHSKSLSKLSYSDKSESPSVSSVLTPPPDLEISEEDLLRYLDEASSKCPSLIGK 60

Query: 58  SAFIGQITDIETDSRGCKIWLSESSMLASSLAPGSLVSVSLPVSGKRFSNGFPLSSLADE 117
           SAFIG++T ++ DS+GCKIWLSE SM+A +LAPGS VSVSL  S K+FSNGFPLSSL DE
Sbjct: 61  SAFIGRVTGVDPDSKGCKIWLSEPSMVAFNLAPGSTVSVSLASSKKKFSNGFPLSSLTDE 120

Query: 118 CVQQFGNESLDQTANQVGSYFALATVFPSCK------------------------VLKNE 153
             + F  +S ++   + G+YFALATVFPSCK                        VLKN 
Sbjct: 121 STRHFQVDSGNKMPGEAGNYFALATVFPSCKQGLRHWVAWWAWTGKDGVANVAYRVLKNG 180

Query: 154 VRLSSSLSYTMGCPLSGRTVFVYTIQSQFLTGLVNGSNKPYNGEANHFSVCTCQELHLEL 213
           VRLS +L +TMG P S R VFVY IQSQ +TG VNGS K ++   N  S+  C+EL+LE+
Sbjct: 181 VRLSLNLYHTMGSPASARIVFVYLIQSQSVTGFVNGSRKSHSTTINGLSLYKCKELYLEM 240

Query: 214 VPLRSRLKMNGAAFSKMKVSAERSRDQLGNGIDSSPKTPM-YQPRLSSQSVNQLASPVSE 272
           +P ++   +N    S ++ S E +  Q+ NG  SSPKTP+ YQ +L S + NQL SP+ +
Sbjct: 241 IPSKNGSTVNSDMQSTVQXSTETTNYQVSNGAASSPKTPVSYQSKLISPNSNQLTSPICD 300

Query: 273 DSVSKSLNWNSLNVDAFDIKEVLEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEIS 332
           DSVS   N N+    +FDI EVL DE+A KLLQ+CAASWLYSRSLL GNLV +P+LSE+ 
Sbjct: 301 DSVSSLSNPNNKIFASFDITEVLGDETAKKLLQSCAASWLYSRSLLTGNLVTIPILSELC 360

Query: 333 IFLVIGANKLPAD-----LTNERSQ---PQVTESMDHESNAFVINHETKVYLYPPLNAVS 384
            F V GA KL  D     LT+ERS     +  +S+ H  +A V++ ETKVYLY P N+ S
Sbjct: 361 TFCVRGAIKLSPDSDNHDLTDERSHGLFSRAPDSVSHVDDACVVDRETKVYLYLPSNSSS 420

Query: 385 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPT 444
           ++ ++G  P+ ++EF+N +A V   + KLGGLS+EYA+LKDIIIS+SVK+TLSS+GLR T
Sbjct: 421 ETPQKGRPPHVELEFKNFKANVGSAV-KLGGLSEEYAVLKDIIISTSVKNTLSSMGLRTT 479

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           KGVLLHGPPGTGKTSLA LC  D+GVNLF+VNG E+VSQ YGESEQALHE+FDSASQ+AP
Sbjct: 480 KGVLLHGPPGTGKTSLAXLCICDAGVNLFSVNGAEIVSQYYGESEQALHEIFDSASQAAP 539

Query: 505 AV 506
           AV
Sbjct: 540 AV 541



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%)

Query: 798 QEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 857
           +     +G R   G+L+ GPPG  KT +A     +AG+N  +V G E+ S++ GESE+A+
Sbjct: 468 KNTLSSMGLRTTKGVLLHGPPGTGKTSLAXLCICDAGVNLFSVNGAEIVSQYYGESEQAL 527

Query: 858 RSLFAKARANAPSI 871
             +F  A   AP++
Sbjct: 528 HEIFDSASQAAPAV 541


>gi|374635878|ref|ZP_09707467.1| AAA family ATPase, CDC48 subfamily [Methanotorris formicicus Mc-S-70]
 gi|373560840|gb|EHP87090.1| AAA family ATPase, CDC48 subfamily [Methanotorris formicicus Mc-S-70]
          Length = 732

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 279/647 (43%), Positives = 392/647 (60%), Gaps = 101/647 (15%)

Query: 393  PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
            P  +I+   V +   +DI   GGL +E   +++++ +          LG+ P KGVLL G
Sbjct: 164  PVKEIKESKVPSVTYEDI---GGLKEEVRKIREMVELPMRHPELFERLGIEPPKGVLLAG 220

Query: 452  PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
            PPGTGKT LA+  A+++G N +++NGPE++S+  GE+E+ L ++F  A ++AP+V+FIDE
Sbjct: 221  PPGTGKTLLAKAVANEAGANFYSINGPEIMSKYVGETEENLRKIFQEAEENAPSVIFIDE 280

Query: 512  LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
            +DAIAP R +   E+ +RMVA LL LMDG+     V+VIAATNRPD+++ ALRRPGR DR
Sbjct: 281  IDAIAPKRDEATGEVERRMVAQLLTLMDGLEGRGQVVVIAATNRPDALDSALRRPGRFDR 340

Query: 572  EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
            EI I               VP    R EIL      M  +  D  ++YL+  THGFVGAD
Sbjct: 341  EIVI--------------GVPDRNARKEILQIHTRNMPLA-EDVNLDYLADVTHGFVGAD 385

Query: 632  LAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCL 691
            LAALC EAA+  LRR                          +L D D  ++  E  +D L
Sbjct: 386  LAALCKEAAMKTLRR--------------------------ILPDLDLDKD--EIPKDIL 417

Query: 692  DSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFE 751
            DS      D   +L                                              
Sbjct: 418  DSIEVTMDDFKEAL---------------------------------------------- 431

Query: 752  KARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTG 811
                +V PSA+REV++EVP VKW+D+GG  EVK +L EAVEWP KH+E F+R+G RPP G
Sbjct: 432  ---KEVEPSALREVLVEVPNVKWDDIGGLEEVKQELKEAVEWPLKHKEVFERMGIRPPRG 488

Query: 812  ILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSI 871
            +L+FGPPG  KTL+A+AVA+E+  NF++VKGPE+FSKWVGESEKA+R +F KAR  AP++
Sbjct: 489  VLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQTAPTV 548

Query: 872  IFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALL 931
            IFFDEID +A  RG   D   V+++V++QLL ELDGL +  +V VIAATNRPD +DPALL
Sbjct: 549  IFFDEIDSIAPRRGSGHDS-GVTEKVVNQLLTELDGLEEPKDVVVIAATNRPDILDPALL 607

Query: 932  RPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREA 991
            RPGR DR+++V  P++  R  IF++H + +P + DV++ +LA  +EG TGADI  ICREA
Sbjct: 608  RPGRLDRIVFVPAPDKKTRLSIFKVHTKNMPLAEDVDLEKLAEKTEGYTGADIEAICREA 667

Query: 992  AISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            A+ A+ EN+ A ++ M+H + A++ ++PS    ++  Y++L+ ++ R
Sbjct: 668  AMLALRENMKADKVEMRHFEEALKKIRPSINKEDVEIYEKLAKEYGR 714


>gi|357509221|ref|XP_003624899.1| AAA family ATPase CDC48 subfamily [Medicago truncatula]
 gi|355499914|gb|AES81117.1| AAA family ATPase CDC48 subfamily [Medicago truncatula]
          Length = 963

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 306/642 (47%), Positives = 411/642 (64%), Gaps = 59/642 (9%)

Query: 26  TPSLTSAAWDSEEDFRTSLEDASTRYPTLIGKSAFIGQITDIE-TDS--RG-CKIWLSES 81
           TP  T+AA    + F +  ++AS  +P+ I +SAF+ +I+DIE TDS  +G  KIWLSES
Sbjct: 31  TPPCTTAA--EPQHFVSLCQEASRIFPSFISQSAFVVEISDIESTDSLSKGTAKIWLSES 88

Query: 82  SMLASSLAPGSLVSVSLPVSGKRF--SNGFPLSSLADECVQQFGNESLDQTAN-QVGSYF 138
           SM+ASSLAPGSLVSVS+P S K    S+ FPL+SL  ECV+ +G E+     +   G+YF
Sbjct: 89  SMIASSLAPGSLVSVSIPSSSKGIAESHNFPLTSLTAECVKCYGLETCKALGDGAAGNYF 148

Query: 139 ALATVFPSCKVLKNEVRLSSSLSYTMGCPLSGRTVFVYTIQSQFLTGLVNGSNKPYNGEA 198
           A+ATVFP+ KVLKN  RLSS LS+ MGCP  G  VFV+ +Q Q L          YN   
Sbjct: 149 AIATVFPAKKVLKNGARLSSILSFAMGCPPFGTCVFVHPLQKQSLV---------YN--- 196

Query: 199 NHFSVCTCQELHLELVPLRSRLKMNGAAFSKMKVSAERSRDQLGNGIDSSPKTPMYQPRL 258
                  C+EL+L+L   +S   +    F  + +S  +S  Q  N I +SPKTP Y  + 
Sbjct: 197 -------CKELYLQLASCKSVQTLKVNNFPSLDLSNSKSCAQSENDIVASPKTPSYASKF 249

Query: 259 SSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLEDESAIKLLQTCAASWLYSRSLL 318
           S+ S+   ++PV ED  S   N+N  +V +FD+ + L + ++ KLL+TCA S LYSR LL
Sbjct: 250 SNDSL--YSNPVIEDLASSVTNYNGQSVASFDVSKTLANGNSKKLLETCATSSLYSRCLL 307

Query: 319 CGNLVAVPMLSEISIFLVIGANKLPADLT-----NERSQPQVTESMDHESNAFVINHETK 373
             N V +PMLSE  IF V+   K+ A +      +  S  + +++++ E+ AF +N ETK
Sbjct: 308 VRNFVTLPMLSEFFIFQVMDIKKVSATIPCPLNGSNNSNLEDSDTVEKENVAFAVNWETK 367

Query: 374 VYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVK 433
           V+LY P NA  +   +  L   +++ ++       +ISKLGGLSKE   LKD+I  S  K
Sbjct: 368 VFLYLPSNAAFEESTQRDLLCLKLDSRH------DNISKLGGLSKEEMFLKDLIFYS--K 419

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           + + S   +   GVLLHGPPGTGKTSLARLCAHD+GV  F++ GP++V+Q YGE+E+ALH
Sbjct: 420 NDILSRFCQYNTGVLLHGPPGTGKTSLARLCAHDAGVKFFSI-GPKIVTQ-YGENERALH 477

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           EVFDSA Q+APAV+FIDE+ AIAP RKDGGEELS+R+V TLL+LMDG+ R +G+LVIAAT
Sbjct: 478 EVFDSALQAAPAVIFIDEIHAIAPTRKDGGEELSKRLVVTLLSLMDGIRRNEGLLVIAAT 537

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NR D I+P LRRPGR D+EIEI               VPS AQR +IL  +L  ++HSL 
Sbjct: 538 NRLDLIDPDLRRPGRFDKEIEI--------------GVPSKAQREDILRTILCEIDHSLS 583

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
           ++++E L+  THGFVGADL  LC  A  +C R   K   SS+
Sbjct: 584 ETQIEELASITHGFVGADLVGLCEWAHFLCPRHSEKTPNSSE 625



 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 215/297 (72%), Positives = 256/297 (86%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF+KAR+++ PSAMREV LEVPKVKWED+GGQ++VK QL+EA+ WPQK+Q+AF 
Sbjct: 629  LKVSYEDFQKARLEIGPSAMREVTLEVPKVKWEDIGGQKKVKNQLLEALVWPQKYQDAFA 688

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             IGT PPTGILM+GPPGCSKTL+ARAVASEAGLNFLAVKGPE+FSKW+GESEK V+SLF 
Sbjct: 689  TIGTDPPTGILMYGPPGCSKTLLARAVASEAGLNFLAVKGPEVFSKWLGESEKNVKSLFD 748

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARANAPS+IFFDEID LA  RGK+ DGVSVSDRV +QLL++LDG+ +RV+V VIAATNR
Sbjct: 749  KARANAPSVIFFDEIDSLAVTRGKDGDGVSVSDRVTNQLLIQLDGVRKRVDVAVIAATNR 808

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             + IDPALLRPGRFDRLLYVGPPN+ DREEIFRIHL + P  SDV+++ELA L+ G TGA
Sbjct: 809  LENIDPALLRPGRFDRLLYVGPPNKMDREEIFRIHLCRTPRDSDVSMKELAQLTNGYTGA 868

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSN 1039
            DIS IC++AA  A+EEN DAS +TM+H KTAI  VQP+E  SY++LSAKFQR V S+
Sbjct: 869  DISRICQQAAFKALEENFDASVVTMKHFKTAIEQVQPTETQSYQKLSAKFQRAVFSD 925



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/262 (35%), Positives = 145/262 (55%), Gaps = 29/262 (11%)

Query: 386 SLREGTLPNAQIEFQNVQATVEQDISKLGGLSK-EYAILKDIIISSSVKSTLSSLGLRPT 444
           ++RE TL   +++++++           GG  K +  +L+ ++     +   +++G  P 
Sbjct: 647 AMREVTLEVPKVKWEDI-----------GGQKKVKNQLLEALVWPQKYQDAFATIGTDPP 695

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
            G+L++GPPG  KT LAR  A ++G+N   V GPEV S+  GESE+ +  +FD A  +AP
Sbjct: 696 TGILMYGPPGCSKTLLARAVASEAGLNFLAVKGPEVFSKWLGESEKNVKSLFDKARANAP 755

Query: 505 AVVFIDELDAIAPAR-KDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPA 562
           +V+F DE+D++A  R KDG G  +S R+   LL  +DGV +   V VIAATNR ++I+PA
Sbjct: 756 SVIFFDEIDSLAVTRGKDGDGVSVSDRVTNQLLIQLDGVRKRVDVAVIAATNRLENIDPA 815

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM 622
           L RPGR DR           LL   P   P+   R EI    L        D  ++ L+ 
Sbjct: 816 LLRPGRFDR-----------LLYVGP---PNKMDREEIFRIHLCRTPRD-SDVSMKELAQ 860

Query: 623 ATHGFVGADLAALCNEAALVCL 644
            T+G+ GAD++ +C +AA   L
Sbjct: 861 LTNGYTGADISRICQQAAFKAL 882



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 116/183 (63%), Gaps = 5/183 (2%)

Query: 810 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
           TG+L+ GPPG  KT +AR  A +AG+ F ++ GP++ +++ GE+E+A+  +F  A   AP
Sbjct: 431 TGVLLHGPPGTGKTSLARLCAHDAGVKFFSI-GPKIVTQY-GENERALHEVFDSALQAAP 488

Query: 870 SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
           ++IF DEI  +A  R  +  G  +S R++  LL  +DG+ +   + VIAATNR D IDP 
Sbjct: 489 AVIFIDEIHAIAPTR--KDGGEELSKRLVVTLLSLMDGIRRNEGLLVIAATNRLDLIDPD 546

Query: 930 LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLIC 988
           L RPGRFD+ + +G P++  RE+I R  L +I  S S+  I ELA ++ G  GAD+  +C
Sbjct: 547 LRRPGRFDKEIEIGVPSKAQREDILRTILCEIDHSLSETQIEELASITHGFVGADLVGLC 606

Query: 989 REA 991
             A
Sbjct: 607 EWA 609


>gi|284162219|ref|YP_003400842.1| ATPase AAA [Archaeoglobus profundus DSM 5631]
 gi|284012216|gb|ADB58169.1| AAA family ATPase, CDC48 subfamily [Archaeoglobus profundus DSM 5631]
          Length = 801

 Score =  501 bits (1289), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/645 (43%), Positives = 382/645 (59%), Gaps = 77/645 (11%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL +E   ++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++ G +
Sbjct: 193  IGGLKEELQKVREVIELPLKYPEIFQRLGIDPPKGVLLYGPPGTGKTLIAKAVANEIGAS 252

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             FT+NGPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+DAIAP R +   E+ +R+V
Sbjct: 253  FFTINGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDAIAPRRDEVTGEVERRVV 312

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL LMDG+     V+VI ATNR D+I+PALRRPGR DREIEI               V
Sbjct: 313  AQLLALMDGLEERGQVIVIGATNRIDAIDPALRRPGRFDREIEI--------------GV 358

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL      M       E EY       FV   L AL N       R+Y    
Sbjct: 359  PDREGRFEILQIHTRNM-----PIEPEY----RIDFV---LEALRN-----IYRQY---- 397

Query: 652  TSSDVLHSTGTLF-EFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSL 710
            T  +VL +    + E +   D         +N+ E              DL   ++ + L
Sbjct: 398  TDKEVLEAIQRTYDEVKILEDKEKIKEVVKKNLPEE----------IIQDLEREIIKAML 447

Query: 711  PLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALK--------------LELV-------- 748
                   E+AD  H  V      +       AL+              LEL+        
Sbjct: 448  ------KELADQTHGFVGADIEALCKEAAMKALRRYIPQIDMNSEEIPLELLESMKVTYD 501

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  ++ PSAMREV++EVPKV W DVGG  +VK +++EAVEWP K+ E FK+ G RP
Sbjct: 502  DFKSALKEIEPSAMREVLVEVPKVTWNDVGGLEDVKREIIEAVEWPLKYPEKFKKFGIRP 561

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+EA  NF++VKGPEL SKW+GESEKAVR +F KAR  A
Sbjct: 562  PKGVLLYGPPGTGKTLIAKAVANEANANFISVKGPELLSKWLGESEKAVRKIFKKARQVA 621

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P IIFFDEID +A +RG E +     +RV++QLL ELDGL +   V VI ATNRPD IDP
Sbjct: 622  PCIIFFDEIDAIAGMRGIEEN--RAVERVVNQLLTELDGLEELEGVVVIGATNRPDIIDP 679

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDRL+YV PP++  R  IF+IH R +P + DV++ ELA ++EG  GADI  +C
Sbjct: 680  ALLRPGRFDRLVYVRPPDKKSRLAIFKIHTRNMPLAEDVDLEELADMTEGYVGADIEAVC 739

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            REA + A+ E+++A ++ M+H   A+R ++PS   S      +F+
Sbjct: 740  REAVMLALREDINAEKVHMRHFLEALRKIKPSVTESMLSFYERFE 784



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/198 (50%), Positives = 134/198 (67%), Gaps = 2/198 (1%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V +ED+GG +E   ++ E +E P K+ E F+R+G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 188 VTYEDIGGLKEELQKVREVIELPLKYPEIFQRLGIDPPKGVLLYGPPGTGKTLIAKAVAN 247

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           E G +F  + GPE+ SK+ GESE+ +R +F +A+ NAPSIIF DEID +A  R  E  G 
Sbjct: 248 EIGASFFTINGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDAIAP-RRDEVTG- 305

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V  RV++QLL  +DGL +R  V VI ATNR D IDPAL RPGRFDR + +G P+   R 
Sbjct: 306 EVERRVVAQLLALMDGLEERGQVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDREGRF 365

Query: 952 EIFRIHLRKIPCSSDVNI 969
           EI +IH R +P   +  I
Sbjct: 366 EILQIHTRNMPIEPEYRI 383


>gi|294463363|gb|ADE77215.1| unknown [Picea sitchensis]
          Length = 442

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 256/436 (58%), Positives = 318/436 (72%), Gaps = 7/436 (1%)

Query: 608  MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQT--SSDVLHSTGTLFE 665
            M HSL + +++ L+  THGFVGADL ALCNEAA+  LRRY  +Q+  + + ++       
Sbjct: 1    MNHSLTNRDLQSLASNTHGFVGADLTALCNEAAMSALRRYISMQSPINPNEIYGCKQQEP 60

Query: 666  FEGHSDTM--LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNF 723
             E    +M  ++++  S+N    S D L   S   SDL     ++   L G  +   + +
Sbjct: 61   LENRHLSMKNIRNTYDSQNTIAPS-DSLQYVSGLLSDLSICSDNTQKQL-GDCTATTNAY 118

Query: 724  HNGVSDSSGGMFMSE-KGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQRE 782
             +G   SS  +     +   LK+ + DFE A+MKVRPSAMREV LE+PKV W D+GGQ E
Sbjct: 119  GHGRDKSSQAICTRLIESPFLKVTIDDFEVAKMKVRPSAMREVTLEIPKVCWSDIGGQAE 178

Query: 783  VKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKG 842
            VK QL EAVEWPQK+Q AF RIGT PP G+LMFGPPGCSKT+MARAVASEAGLNFLAVKG
Sbjct: 179  VKQQLKEAVEWPQKYQHAFLRIGTHPPRGVLMFGPPGCSKTIMARAVASEAGLNFLAVKG 238

Query: 843  PELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLL 902
            PELFSKWVGESEKA++SLFAKARA APSIIFFDEIDGLA  R   S  +SV DRVMSQLL
Sbjct: 239  PELFSKWVGESEKAIQSLFAKARAAAPSIIFFDEIDGLAVAREHSSGAISVGDRVMSQLL 298

Query: 903  VELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP 962
            VE+DGL+ R+ VTVIAATNRPDKID AL+RPGRFDRL+YVG PN+ DR+EIF IH+RK+P
Sbjct: 299  VEMDGLNPRIGVTVIAATNRPDKIDAALMRPGRFDRLVYVGLPNQADRKEIFDIHMRKMP 358

Query: 963  CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEI 1022
            C SD+ + ELA L++G TGADIS +CREAA++A+EEN+    ++M+H K A+  VQPS++
Sbjct: 359  CGSDLTMLELASLTDGYTGADISSVCREAAMAALEENIGIQEVSMRHFKFALARVQPSDL 418

Query: 1023 HSYKELSAKFQRLVHS 1038
             SY+ LSAKFQRL  S
Sbjct: 419  SSYENLSAKFQRLTSS 434



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 147/275 (53%), Gaps = 35/275 (12%)

Query: 386 SLREGTLPNAQIEFQNV--QATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRP 443
           ++RE TL   ++ + ++  QA V+Q + +     ++Y            +     +G  P
Sbjct: 157 AMREVTLEIPKVCWSDIGGQAEVKQQLKEAVEWPQKY------------QHAFLRIGTHP 204

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
            +GVL+ GPPG  KT +AR  A ++G+N   V GPE+ S+  GESE+A+  +F  A  +A
Sbjct: 205 PRGVLMFGPPGCSKTIMARAVASEAGLNFLAVKGPELFSKWVGESEKAIQSLFAKARAAA 264

Query: 504 PAVVFIDELDAIAPARK--DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           P+++F DE+D +A AR+   G   +  R+++ LL  MDG+    GV VIAATNRPD I+ 
Sbjct: 265 PSIIFFDEIDGLAVAREHSSGAISVGDRVMSQLLVEMDGLNPRIGVTVIAATNRPDKIDA 324

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
           AL RPGR DR + +               +P+ A R EI    +  M      S++  L 
Sbjct: 325 ALMRPGRFDRLVYV--------------GLPNQADRKEIFDIHMRKMP---CGSDLTMLE 367

Query: 622 MA--THGFVGADLAALCNEAALVCLRRYSKIQTSS 654
           +A  T G+ GAD++++C EAA+  L     IQ  S
Sbjct: 368 LASLTDGYTGADISSVCREAAMAALEENIGIQEVS 402


>gi|288932521|ref|YP_003436581.1| ATPase AAA, CDC48 subfamily [Ferroglobus placidus DSM 10642]
 gi|288894769|gb|ADC66306.1| AAA family ATPase, CDC48 subfamily [Ferroglobus placidus DSM 10642]
          Length = 805

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 272/632 (43%), Positives = 384/632 (60%), Gaps = 40/632 (6%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL +E   ++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++ G  
Sbjct: 194  IGGLKEELQKVREVIELPLKYPEIFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEIGAT 253

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              T+NGPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+DAIAP R +   E+ +R+V
Sbjct: 254  FLTINGPEIMSKFYGESEQRLREIFEKAKENAPSIIFIDEIDAIAPRRDEVTGEVERRVV 313

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL LMDG+     V+VI ATNR ++++PALRRPGR DREIEI               V
Sbjct: 314  AQLLTLMDGLEERGQVIVIGATNRIEAVDPALRRPGRFDREIEI--------------GV 359

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL      M       E EY    +  FV   L +L N        R S+I+
Sbjct: 360  PDREGRFEILQIHTRNM-----PLEPEY----SREFVLEALNSLKNLLKEEGDSRLSQIE 410

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDS---DCSRNITESS-RDCLDSASPCT-SDLPTSLL 706
               + +       E +   + +  +    D  R I ++  R   D       +D+     
Sbjct: 411  FIIEEVKEAERKEEVKAIIENLFPEELRPDLEREIIKAMLRHLADQTHGFVGADIEALCK 470

Query: 707  SSSLP-LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREV 765
             +++  LR  +  I         D +G     E    +K+   DF++A  ++ PSAMREV
Sbjct: 471  EAAMKALRRYLPRI---------DLNGDELPVELLEEMKVTFDDFKEALKEIEPSAMREV 521

Query: 766  ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
            ++EVPKV WEDVGG  +VK +++EAVEWP K+ E FK+ G +PP G+L++GPPG  KTL+
Sbjct: 522  LVEVPKVTWEDVGGLEDVKQEVIEAVEWPLKYPEKFKKFGIKPPKGVLLYGPPGTGKTLI 581

Query: 826  ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
            A+AVA+E+  NF++VKG EL SKW+GESEKAVR +F KA+  AP IIFFDEID +A +RG
Sbjct: 582  AKAVANESEANFISVKGSELLSKWLGESEKAVRKIFRKAKQVAPCIIFFDEIDAIAQMRG 641

Query: 886  KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
             + +G    +RV++QLL E+DGL +   V VI ATNRPD IDPALLRPGRFDRL+YV PP
Sbjct: 642  ID-EGSRAVERVVNQLLTEMDGLEELEGVIVIGATNRPDIIDPALLRPGRFDRLVYVRPP 700

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI 1005
            ++  R  IF+IH R +P + DV++ ELA L+EG  GADI  +CREA + A+ EN++A ++
Sbjct: 701  DKKSRYAIFKIHTRNMPLAEDVDLEELAELTEGYVGADIEAVCREAVMLALRENINAEKV 760

Query: 1006 TMQHLKTAIRHVQPSEIHSYKELSAKFQRLVH 1037
             M+H   AI+ ++PS   +      KF+  V 
Sbjct: 761  EMRHFYQAIKKIKPSVNEAMLRFYEKFEERVK 792



 Score =  201 bits (512), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/195 (50%), Positives = 133/195 (68%), Gaps = 2/195 (1%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V +ED+GG +E   ++ E +E P K+ E F+R+G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 189 VTYEDIGGLKEELQKVREVIELPLKYPEIFQRLGIEPPKGVLLYGPPGTGKTLIAKAVAN 248

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           E G  FL + GPE+ SK+ GESE+ +R +F KA+ NAPSIIF DEID +A  R  E  G 
Sbjct: 249 EIGATFLTINGPEIMSKFYGESEQRLREIFEKAKENAPSIIFIDEIDAIAP-RRDEVTG- 306

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V  RV++QLL  +DGL +R  V VI ATNR + +DPAL RPGRFDR + +G P+   R 
Sbjct: 307 EVERRVVAQLLTLMDGLEERGQVIVIGATNRIEAVDPALRRPGRFDREIEIGVPDREGRF 366

Query: 952 EIFRIHLRKIPCSSD 966
           EI +IH R +P   +
Sbjct: 367 EILQIHTRNMPLEPE 381


>gi|327401967|ref|YP_004342806.1| AAA family ATPase [Archaeoglobus veneficus SNP6]
 gi|327317475|gb|AEA48091.1| AAA family ATPase, CDC48 subfamily [Archaeoglobus veneficus SNP6]
          Length = 808

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/629 (41%), Positives = 379/629 (60%), Gaps = 43/629 (6%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL +E   +++II +          LG+ P KGVLLHGPPGTGKT +A+  A++ G +
Sbjct: 196  IGGLKEELQKVREIIELPLRYPELFQRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIGAS 255

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             FT+NGPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 256  FFTINGPEIMSKFYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRVV 315

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSP 588
            A LL LMDG+     V+VI ATNR D+++PALRRPGR DREIEI   D    F +L+   
Sbjct: 316  AQLLTLMDGLEERGQVIVIGATNRIDAVDPALRRPGRFDREIEIGVPDREGRFEILQIHT 375

Query: 589  AAVP-SPAQRLEILHALLSGMEHSLLDS--EVEYLSMATHGFVGADLAALCNEAALVCLR 645
              +P  P    E +   L  ++ +L +   +  ++S+A      ++      E     + 
Sbjct: 376  RNMPLEPEYSREFVLPALKSLKKALEEEGEDASFVSIAIEEVEKSERKEEIKEIVEKIVP 435

Query: 646  RYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ-DSDCSRNITESSRDCLDSASPCTSDLPTS 704
                 +   D+L S       + H       ++ C     ++ R  L      + ++P  
Sbjct: 436  PEMLPELERDILRSMLRAIADQTHGFVGADIEALCKEAAMKALRRYLPHIDLNSEEIPAE 495

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
            +L S                                  +++   DF +A   + PSAMRE
Sbjct: 496  VLES----------------------------------IRVTFDDFREAMKGIEPSAMRE 521

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
            V++E+PKV W+DVGG  +VK +++EAVEWP ++ E F+R G RPP G+L++GPPG  KTL
Sbjct: 522  VLVEIPKVSWKDVGGLEDVKREIVEAVEWPLRYPEKFRRFGIRPPKGVLLYGPPGTGKTL 581

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E   NF++VKG EL SKW+GESEKAVR +F KAR  AP IIFFDEID +A +R
Sbjct: 582  IAKAVANETKANFISVKGSELLSKWLGESEKAVRKIFRKARQVAPCIIFFDEIDAIAPMR 641

Query: 885  GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
            G E +G    +RV++QLL E+DGL     V VI ATNRPD +DPALLRPGRFDRL+YV P
Sbjct: 642  GIE-EGSRAVERVVNQLLTEMDGLEDLEGVIVIGATNRPDILDPALLRPGRFDRLVYVRP 700

Query: 945  PNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR 1004
            P++  R  IF+IH R +P S DV++ ELA ++EG  GADI  +CREA + A+ EN+D+ R
Sbjct: 701  PDKRSRLAIFKIHTRSMPLSDDVDLVELADITEGYVGADIEAVCREAVMLALRENMDSER 760

Query: 1005 ITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            I M+H   A++ ++PS   S      +F+
Sbjct: 761  IEMRHFLEALKKIKPSITESMLNFYERFE 789



 Score =  196 bits (498), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/257 (42%), Positives = 156/257 (60%), Gaps = 15/257 (5%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG +E   ++ E +E P ++ E F+R+G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 191  VTYEDIGGLKEELQKVREIIELPLRYPELFQRLGIDPPKGVLLHGPPGTGKTLIAKAVAN 250

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G +F  + GPE+ SK+ GESE+ +R +F +A+ NAPSIIF DEID +A  R +E  G 
Sbjct: 251  EIGASFFTINGPEIMSKFYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKR-EEVTG- 308

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R  V VI ATNR D +DPAL RPGRFDR + +G P+   R 
Sbjct: 309  EVERRVVAQLLTLMDGLEERGQVIVIGATNRIDAVDPALRRPGRFDREIEIGVPDREGRF 368

Query: 952  EIFRIHLRKIPC----SSDVNIRELACLSEGC--TGADISLICREAAISAIEENLDASRI 1005
            EI +IH R +P     S +  +  L  L +     G D S +       AIEE   + R 
Sbjct: 369  EILQIHTRNMPLEPEYSREFVLPALKSLKKALEEEGEDASFVS-----IAIEEVEKSER- 422

Query: 1006 TMQHLKTAIRHVQPSEI 1022
              + +K  +  + P E+
Sbjct: 423  -KEEIKEIVEKIVPPEM 438


>gi|134046525|ref|YP_001098010.1| AAA family ATPase [Methanococcus maripaludis C5]
 gi|132664150|gb|ABO35796.1| AAA family ATPase, CDC48 subfamily [Methanococcus maripaludis C5]
          Length = 784

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/696 (38%), Positives = 395/696 (56%), Gaps = 137/696 (19%)

Query: 386  SLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPT 444
             L+E  +PN   E              +GGL +E   +++++ +          LG+ P 
Sbjct: 165  ELKETKVPNVTYE-------------DIGGLKEEVKKIREMVELPMRYPELFDKLGIEPP 211

Query: 445  KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
            KGVLL GPPGTGKT LA+  A+++G N +T+NGPE++S+  GE+E+ L ++F+ A +++P
Sbjct: 212  KGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSP 271

Query: 505  AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
            +++FIDE+DA+AP R +   E+ +RMVA LL L+DG+     V+++AATNRPDSI+ ALR
Sbjct: 272  SIIFIDEIDAVAPKRDEASGEVERRMVAQLLTLLDGLEGRGQVVILAATNRPDSIDMALR 331

Query: 565  RPGRLDREIEI---DMSFLFSLLKNSPAAVP-----SPAQRLEILHALLSGMEHSLLDSE 616
            RPGRLDRE+ I   D      +L+     +P        + + +L+ L+   E + +++ 
Sbjct: 332  RPGRLDRELTIGIPDRHARKEILQIHTRNMPLQPDYEKNEVIPVLNELIGEFERTKIENT 391

Query: 617  VEYLSMA----------------------------------THGFVGADLAALCNEAALV 642
            V+ +  A                                  THGF GADLAAL  EAA+ 
Sbjct: 392  VKLVEKASSEAEIEKILKDEDIEDKVKSKLNQIMVKELADKTHGFAGADLAALSKEAAMK 451

Query: 643  CLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLP 702
             LRR                          +L D D  +   E  R+ LD          
Sbjct: 452  TLRR--------------------------LLPDIDLEKE--EIPREVLDK--------- 474

Query: 703  TSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAM 762
                         +    D+F  G+ +                           V PSA+
Sbjct: 475  -------------IKVTKDDFVGGLKE---------------------------VEPSAL 494

Query: 763  REVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            REV++EVP +KW DVGG  ++K  L EAVEWP K++E F+R+G RPP G+L+FGPPG  K
Sbjct: 495  REVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNREMFERMGIRPPKGVLLFGPPGTGK 554

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL+A+AVA+E+  NF++VKGPE+FSKWVGESEKA+R +F KAR  AP++IFFDEID +A 
Sbjct: 555  TLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAP 614

Query: 883  IRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
             RG    G  VS++V++QLL ELDGL +  +V +IAATNRP+ +DPALLRPGR DR++ V
Sbjct: 615  KRGMSFGGSGVSEKVVNQLLTELDGLEEPKDVVIIAATNRPNLLDPALLRPGRLDRIVLV 674

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              P+E  R EIF++H + +P   DVN+++LA  + G TGADI  +CRE+A+ A+ EN+++
Sbjct: 675  TVPDENARFEIFKVHTKGMPIGKDVNLQKLAKETNGYTGADIEALCRESAMIALRENVNS 734

Query: 1003 SRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
              + ++H + A + + PS    ++  Y++L+ ++ R
Sbjct: 735  EHVELKHFEAAFKRIAPSVKDEDMDEYRDLAKEYGR 770



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 103/225 (45%), Positives = 147/225 (65%), Gaps = 5/225 (2%)

Query: 749 DFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
           ++ +  +K  P + ++E   +VP V +ED+GG +E   ++ E VE P ++ E F ++G  
Sbjct: 152 EYTQIELKTEPVTELKET--KVPNVTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIE 209

Query: 808 PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
           PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+ +R +F +A  N
Sbjct: 210 PPKGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEEN 269

Query: 868 APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
           +PSIIF DEID +A  R + S    V  R+++QLL  LDGL  R  V ++AATNRPD ID
Sbjct: 270 SPSIIFIDEIDAVAPKRDEASG--EVERRMVAQLLTLLDGLEGRGQVVILAATNRPDSID 327

Query: 928 PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIREL 972
            AL RPGR DR L +G P+   R+EI +IH R +P   D    E+
Sbjct: 328 MALRRPGRLDRELTIGIPDRHARKEILQIHTRNMPLQPDYEKNEV 372


>gi|150399923|ref|YP_001323690.1| AAA family ATPase [Methanococcus vannielii SB]
 gi|150012626|gb|ABR55078.1| AAA family ATPase, CDC48 subfamily [Methanococcus vannielii SB]
          Length = 781

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 270/709 (38%), Positives = 401/709 (56%), Gaps = 143/709 (20%)

Query: 386  SLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPT 444
             L+E  +PN   E              +GGL +E   +++++ +          LG+ P 
Sbjct: 165  ELKETKVPNVTYE-------------DIGGLKEEVKKIREMVELPMRYPELFDKLGIEPP 211

Query: 445  KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
            KGVLL GPPGTGKT LA+  A+++G N +T+NGPE++S+  GE+E+ L ++F+ A +++P
Sbjct: 212  KGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSP 271

Query: 505  AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
            +++FIDE+DA+AP R +   E+ +RMVA LL L+DG+     V+++AATNRPDSI+ ALR
Sbjct: 272  SIIFIDEIDAVAPKRDEASGEVERRMVAQLLTLLDGLESRGQVVILAATNRPDSIDMALR 331

Query: 565  RPGRLDREIEIDM---------------------------------SFLFSLLKNSPAAV 591
            RPGRLDRE+ I +                                   +  L +N    V
Sbjct: 332  RPGRLDRELTIGIPDRTARKEILQIHTRNMPLQPDYEKNNVISVLNELIGELDRNKIEEV 391

Query: 592  PSPAQ---RLEILHALLSGMEHSLLDS--------EVEYLSMATHGFVGADLAALCNEAA 640
                +   + E++  +L   E+ L D          ++ L+  THGF GADLAAL  EAA
Sbjct: 392  VKKVENSAKEELIEKILK--ENDLEDKVKLKLNQMMIKELADKTHGFAGADLAALSKEAA 449

Query: 641  LVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSD 700
            +  LRR                          +L D D  +   E  R+ LD        
Sbjct: 450  MKTLRR--------------------------ILPDIDLEKE--EIPREVLDK------- 474

Query: 701  LPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPS 760
                           +    D+F  G+ +                           V PS
Sbjct: 475  ---------------IKVTRDDFFGGLKE---------------------------VEPS 492

Query: 761  AMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGC 820
            A+REV++EVP V+W D+GG  E+K  L EAVEWP K++E F+R+G RPP G+L+FGPPG 
Sbjct: 493  ALREVLVEVPNVRWNDIGGLEEIKQDLKEAVEWPIKNREIFERMGIRPPKGVLLFGPPGT 552

Query: 821  SKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGL 880
             KTL+A+AVA+E+  NF++VKGPE+FSKWVGESEKA+R +F KAR  AP+++FFDEID +
Sbjct: 553  GKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVVFFDEIDSV 612

Query: 881  AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLL 940
            A  RG +     V+++V++QLL ELDGL +  +V +IAATNRPD +D ALLRPGR DR++
Sbjct: 613  APKRGMDFGSSGVTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRIV 672

Query: 941  YVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             V  P+E  R EIF++H + +P S DV+++ LA  ++G TGADI  +CREAA+ A+ E++
Sbjct: 673  LVQVPDENARYEIFKVHAKSMPLSKDVDLKALATETKGYTGADIEAVCREAAMIALREDI 732

Query: 1001 DASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHSNAEADES 1045
            ++  + ++H K A+  + PS    ++ +YK+L+ ++ R + S  E DE+
Sbjct: 733  NSKEVFLKHFKGALNRIAPSVKDDDMDAYKDLAREYGRSIES--EKDEN 779



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 103/219 (47%), Positives = 146/219 (66%), Gaps = 5/219 (2%)

Query: 749 DFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
           ++ +  +K  P + ++E   +VP V +ED+GG +E   ++ E VE P ++ E F ++G  
Sbjct: 152 EYTQIELKTEPVTELKET--KVPNVTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIE 209

Query: 808 PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
           PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+ +R +F +A  N
Sbjct: 210 PPKGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEEN 269

Query: 868 APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
           +PSIIF DEID +A  R + S    V  R+++QLL  LDGL  R  V ++AATNRPD ID
Sbjct: 270 SPSIIFIDEIDAVAPKRDEASG--EVERRMVAQLLTLLDGLESRGQVVILAATNRPDSID 327

Query: 928 PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD 966
            AL RPGR DR L +G P+ T R+EI +IH R +P   D
Sbjct: 328 MALRRPGRLDRELTIGIPDRTARKEILQIHTRNMPLQPD 366


>gi|159905162|ref|YP_001548824.1| AAA family ATPase [Methanococcus maripaludis C6]
 gi|159886655|gb|ABX01592.1| AAA family ATPase, CDC48 subfamily [Methanococcus maripaludis C6]
          Length = 781

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 266/695 (38%), Positives = 395/695 (56%), Gaps = 137/695 (19%)

Query: 387  LREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTK 445
            L+E  +PN   E              +GGL +E   +++++ +          LG+ P K
Sbjct: 166  LKETKVPNVTYE-------------DIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPK 212

Query: 446  GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPA 505
            GVLL GPPGTGKT LA+  A+++G N +T+NGPE++S+  GE+E+ L ++F+ A +++P+
Sbjct: 213  GVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPS 272

Query: 506  VVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRR 565
            ++FIDE+DA+AP R +   E+ +RMVA LL L+DG+     V+++AATNRPDSI+ ALRR
Sbjct: 273  IIFIDEIDAVAPKRDEASGEVERRMVAQLLTLLDGLEGRGQVVILAATNRPDSIDMALRR 332

Query: 566  PGRLDREIEI---DMSFLFSLLKNSPAAVP-----SPAQRLEILHALLSGMEHSLLDSEV 617
            PGRLDRE+ I   D      +L+     +P        + + +L+ L+   + S ++S V
Sbjct: 333  PGRLDRELTIGIPDRHARNEILQIHTRNMPLQPDYEKNEVIPVLNELIGEFDRSKIESIV 392

Query: 618  EYLSMA----------------------------------THGFVGADLAALCNEAALVC 643
            + +  A                                  THGF GADLAAL  EAA+  
Sbjct: 393  KLVEKASSEAEIEKILKDEDIEDKVKVKLNQIMVKELADKTHGFAGADLAALSKEAAMKT 452

Query: 644  LRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPT 703
            LRR                          +L D D  +   E  R+ LD      SD   
Sbjct: 453  LRR--------------------------LLPDIDLEKE--EIPREVLDKIKVTKSD--- 481

Query: 704  SLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMR 763
                               F  G+ +                           V PSA+R
Sbjct: 482  -------------------FVGGLKE---------------------------VEPSALR 495

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            EV++EVP +KW DVGG  ++K  L EAVEWP K++E F+R+G RPP G+L+FGPPG  KT
Sbjct: 496  EVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNREMFERMGIRPPKGVLLFGPPGTGKT 555

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+AVA+E+  NF++VKGPE+FSKWVGESEKA+R +F KAR  AP++IFFDEID +A  
Sbjct: 556  LLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSVAPK 615

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            RG    G  VS++V++QLL ELDGL +  +V +IAATNRP+ +DPALLRPGR DR++ V 
Sbjct: 616  RGMSFGGSGVSEKVVNQLLTELDGLEEPKDVVIIAATNRPNLLDPALLRPGRLDRIVLVT 675

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
             P+E  R EIF++H + +P   DV++++L+  + G TGADI  +CREAA+ A+ E++++ 
Sbjct: 676  VPDENARFEIFKVHTKGMPIGKDVDLQKLSKETNGYTGADIEALCREAAMIALREDINSK 735

Query: 1004 RITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
             + ++H ++A + + PS    ++  Y++L+ ++ R
Sbjct: 736  HVELRHFESAFKRIAPSVKEEDMDEYRDLAKEYGR 770



 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 103/225 (45%), Positives = 146/225 (64%), Gaps = 5/225 (2%)

Query: 749 DFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
           ++ +  +K  P + ++E   +VP V +ED+GG +E   ++ E VE P ++ E F ++G  
Sbjct: 152 EYTQIELKTEPVTELKET--KVPNVTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIE 209

Query: 808 PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
           PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+ +R +F +A  N
Sbjct: 210 PPKGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEEN 269

Query: 868 APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
           +PSIIF DEID +A  R + S    V  R+++QLL  LDGL  R  V ++AATNRPD ID
Sbjct: 270 SPSIIFIDEIDAVAPKRDEASG--EVERRMVAQLLTLLDGLEGRGQVVILAATNRPDSID 327

Query: 928 PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIREL 972
            AL RPGR DR L +G P+   R EI +IH R +P   D    E+
Sbjct: 328 MALRRPGRLDRELTIGIPDRHARNEILQIHTRNMPLQPDYEKNEV 372


>gi|333910254|ref|YP_004483987.1| ATPase AAA [Methanotorris igneus Kol 5]
 gi|333750843|gb|AEF95922.1| AAA family ATPase, CDC48 subfamily [Methanotorris igneus Kol 5]
          Length = 732

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 270/647 (41%), Positives = 381/647 (58%), Gaps = 101/647 (15%)

Query: 393  PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
            P  +I+   V +   +DI   GGL +E   +++++ +          LG+ P KGVLL G
Sbjct: 164  PVKEIKESKVPSVTYEDI---GGLKEEVRKIREMVELPMRHPELFERLGIEPPKGVLLAG 220

Query: 452  PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
            PPGTGKT LA+  A+++G N +++NGPE++S+  GE+E+ L ++F  A ++AP+V+FIDE
Sbjct: 221  PPGTGKTLLAKAVANEAGANFYSINGPEILSKYVGETEENLRKIFQEAEENAPSVIFIDE 280

Query: 512  LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
            +DAIAP R +   E+ +RMVA LL LMDG+     V+VIAATNRPD+++PALRRPGR DR
Sbjct: 281  IDAIAPKRDEATGEVERRMVAQLLTLMDGLESRGQVVVIAATNRPDALDPALRRPGRFDR 340

Query: 572  EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
            EI I               VP    R EIL      M  +  D +++YL+  THGFVGAD
Sbjct: 341  EIVI--------------GVPDRNARKEILQIHTRNMPLA-KDVDLDYLADVTHGFVGAD 385

Query: 632  LAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCL 691
            LAALC EAA+  LRR                          +L D D  ++  E  ++ L
Sbjct: 386  LAALCKEAAMKTLRR--------------------------ILPDLDLDKD--EIPKEVL 417

Query: 692  DSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFE 751
            DS      D   +L          + E+     N   D  GG+                 
Sbjct: 418  DSIEVTMDDFKEALKEVE---PSALREVLVEVPNVKWDDIGGL----------------- 457

Query: 752  KARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTG 811
                                   EDV      K +L EAVEWP KH++ F+R+G RPP G
Sbjct: 458  -----------------------EDV------KQELREAVEWPLKHRDVFERMGIRPPRG 488

Query: 812  ILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSI 871
            +L+FGPPG  KTL+A+AVA+E+  NF++VKGPE+FSKWVGESEKA+R +F KAR  AP I
Sbjct: 489  VLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQTAPCI 548

Query: 872  IFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALL 931
            IFFDEID +A  RG   D   V+++V++QLL ELDGL +  +V VIAATNRPD +DPALL
Sbjct: 549  IFFDEIDSIAPRRGSGHDS-GVTEKVVNQLLTELDGLEEPKDVVVIAATNRPDILDPALL 607

Query: 932  RPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREA 991
            RPGR DR++ V  P++  R  IF++H RK+P + DV++ +LA  +EG TGADI  +CREA
Sbjct: 608  RPGRLDRIVLVPAPDKKARLAIFKVHTRKMPLADDVDLEKLAEKTEGYTGADIEAVCREA 667

Query: 992  AISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            A+ A+ EN++A ++ M+H + A++ ++PS    ++  Y++L+ ++ R
Sbjct: 668  AMLALRENINAEKVEMRHFEEALKKIKPSVSKEDMELYEKLAKEYGR 714


>gi|11499681|ref|NP_070923.1| cell division protein CDC48 [Archaeoglobus fulgidus DSM 4304]
 gi|2648442|gb|AAB89157.1| cell division control protein 48, AAA family (cdc48-2) [Archaeoglobus
            fulgidus DSM 4304]
          Length = 811

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/631 (41%), Positives = 376/631 (59%), Gaps = 74/631 (11%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL +E   ++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++ G +
Sbjct: 199  IGGLKEELQKVREVIELPLRYPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEIGAS 258

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             FT+NGPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 259  FFTINGPEIMSKFYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRVV 318

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL LMDG+     V+VI ATNR D+++PALRRPGR DREIEI               V
Sbjct: 319  AQLLTLMDGLEERGQVIVIGATNRIDAVDPALRRPGRFDREIEI--------------GV 364

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EI       M                        A    E  L  + R+ +  
Sbjct: 365  PDREGRYEIFQIHTRNMPLE---------------------AKYSREFVLDAIERFKRQV 403

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
               +++ +   L++   +S+T  +     +N+    ++ +D       ++  ++L S   
Sbjct: 404  DDPELIKNLDFLYDEIKNSETEEEVKGAVKNLL--PQEVIDE---LEVEITKAMLRS--- 455

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALK--------------LELV--------D 749
                   +AD  H  V      +       AL+              +EL+        D
Sbjct: 456  -------LADQTHGFVGADIEALCKEAAMKALRRYLPQIDLNEDEIPIELLESIRVTWDD 508

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F  A  ++ PSAMREV +E+PKV W DVGG  +VK +++EAVEWP K+ E FK+ G +PP
Sbjct: 509  FMDALREIEPSAMREVFVEIPKVTWNDVGGLEDVKREIIEAVEWPLKYPEKFKKFGIKPP 568

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L++GPPG  KTL+A+AVA+E+  NF+++KG ++ SKW+GESEKAVR +F KAR  AP
Sbjct: 569  KGVLLYGPPGTGKTLIAKAVANESEANFISIKGGQILSKWLGESEKAVRKIFRKARQVAP 628

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
             IIFFDEID +A +RG + +G    +RV++QLL E+DGL +   V VI ATNRPD +DPA
Sbjct: 629  CIIFFDEIDAIAQMRGID-EGSRAVERVLNQLLTEMDGLEELHGVVVIGATNRPDILDPA 687

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            LLRPGRFDR++YV PP++  R  IF+IH R +P S DV++ ELA L+EG  GADI  ICR
Sbjct: 688  LLRPGRFDRMVYVRPPDKKSRLAIFKIHTRDMPLSEDVDLEELADLTEGYVGADIEAICR 747

Query: 990  EAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            EA + AI EN++A ++ M+H   A++ ++PS
Sbjct: 748  EAVMLAIRENINAEKVEMRHFLEALKKIKPS 778



 Score =  202 bits (515), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 108/257 (42%), Positives = 160/257 (62%), Gaps = 16/257 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +E   ++ E +E P ++ E F+R+G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 194  ITYEDIGGLKEELQKVREVIELPLRYPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVAN 253

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G +F  + GPE+ SK+ GESE+ +R +F +A+ NAPSIIF DEID +A  R +E  G 
Sbjct: 254  EIGASFFTINGPEIMSKFYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKR-EEVTG- 311

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R  V VI ATNR D +DPAL RPGRFDR + +G P+   R 
Sbjct: 312  EVERRVVAQLLTLMDGLEERGQVIVIGATNRIDAVDPALRRPGRFDREIEIGVPDREGRY 371

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD------ASRI 1005
            EIF+IH R +P  +  + RE    +       I    R+     + +NLD       +  
Sbjct: 372  EIFQIHTRNMPLEAKYS-REFVLDA-------IERFKRQVDDPELIKNLDFLYDEIKNSE 423

Query: 1006 TMQHLKTAIRHVQPSEI 1022
            T + +K A++++ P E+
Sbjct: 424  TEEEVKGAVKNLLPQEV 440



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/262 (37%), Positives = 145/262 (55%), Gaps = 20/262 (7%)

Query: 386 SLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPT 444
           +LRE   P+A  E F  +      D+  L  + +E  I++ +             G++P 
Sbjct: 512 ALRE-IEPSAMREVFVEIPKVTWNDVGGLEDVKRE--IIEAVEWPLKYPEKFKKFGIKPP 568

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           KGVLL+GPPGTGKT +A+  A++S  N  ++ G +++S+  GESE+A+ ++F  A Q AP
Sbjct: 569 KGVLLYGPPGTGKTLIAKAVANESEANFISIKGGQILSKWLGESEKAVRKIFRKARQVAP 628

Query: 505 AVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPAL 563
            ++F DE+DAIA  R  D G    +R++  LL  MDG+    GV+VI ATNRPD ++PAL
Sbjct: 629 CIIFFDEIDAIAQMRGIDEGSRAVERVLNQLLTEMDGLEELHGVVVIGATNRPDILDPAL 688

Query: 564 RRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA 623
            RPGR DR + +            P   P    RL I       M  S  D ++E L+  
Sbjct: 689 LRPGRFDRMVYV-----------RP---PDKKSRLAIFKIHTRDMPLS-EDVDLEELADL 733

Query: 624 THGFVGADLAALCNEAALVCLR 645
           T G+VGAD+ A+C EA ++ +R
Sbjct: 734 TEGYVGADIEAICREAVMLAIR 755


>gi|340623358|ref|YP_004741811.1| cell division protein CDC48 [Methanococcus maripaludis X1]
 gi|339903626|gb|AEK19068.1| cell division protein CDC48 [Methanococcus maripaludis X1]
          Length = 788

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 264/656 (40%), Positives = 390/656 (59%), Gaps = 61/656 (9%)

Query: 386  SLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPT 444
             L+E  +PN   E              +GGL +E   +++++ +          LG+ P 
Sbjct: 165  ELKETKVPNVTYE-------------DIGGLKEEVKKIREMVELPMRYPELFDKLGIEPP 211

Query: 445  KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
            KGVLL GPPGTGKT LA+  A+++G N +T+NGPE++S+  GE+E+ L ++F+ A ++AP
Sbjct: 212  KGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENAP 271

Query: 505  AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
            +++FIDE+DA+AP R +   E+ +RMVA LL LMDG+     ++++AATNRPDSI+ ALR
Sbjct: 272  SIIFIDEIDAVAPKRDEASGEVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALR 331

Query: 565  RPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT 624
            RPGRLDREI I               +P    R EIL      M    L  + E      
Sbjct: 332  RPGRLDREITI--------------GIPDRHGRNEILQIHTRNMP---LQPDYEK----- 369

Query: 625  HGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNI- 683
                 +D+ ++ NE  LV     SKI++   ++    +  E E     +L+D +    + 
Sbjct: 370  -----SDVISILNE--LVGEYDRSKIESLVKLVEKASSEEEIE----KILKDGEVEDKVK 418

Query: 684  ---TESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKG 740
                +S    L   +   +    + LS    ++     + D       D        E  
Sbjct: 419  VKLNQSMVKELADKTHGFAGADLAALSKEAAMKTLRRFLPD------IDLEKEEIPREVL 472

Query: 741  CALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEA 800
              +K+   DF     +V PSA+REV++EVP +KW DVGG  ++K  L EAVEWP K++E 
Sbjct: 473  DKIKVTKEDFVGGLKEVEPSALREVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNKEM 532

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
            F+R+G RPP G+L+FGPPG  KTL+A+AVA+E+  NF++VKGPE+FSKWVGESEKA+R +
Sbjct: 533  FERMGIRPPKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREI 592

Query: 861  FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
            F KAR  AP++IFFDEID +A  RG +     V+++V++QLL ELDGL +  +V +IAAT
Sbjct: 593  FRKARQAAPTVIFFDEIDSVAPKRGMDFGSSGVTEKVVNQLLTELDGLEEPKDVVIIAAT 652

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD +D ALLRPGR DR++ V  PNET R EIF++H + +P   DVN+ +LA  ++G T
Sbjct: 653  NRPDILDQALLRPGRLDRIVLVPIPNETARLEIFKVHTKGMPIGKDVNLEKLAKETKGYT 712

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            GADI  +CREAA+ A+ EN+++  +  +H   A + + PS    ++  YK+L+ ++
Sbjct: 713  GADIEAVCREAAMIALRENINSEHVESRHFDGAFKRIAPSVKDDDMDEYKDLAKEY 768



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 100/219 (45%), Positives = 144/219 (65%), Gaps = 5/219 (2%)

Query: 749 DFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
           ++ +  +K  P + ++E   +VP V +ED+GG +E   ++ E VE P ++ E F ++G  
Sbjct: 152 EYTQIELKTEPVTELKET--KVPNVTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIE 209

Query: 808 PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
           PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+ +R +F +A  N
Sbjct: 210 PPKGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEEN 269

Query: 868 APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
           APSIIF DEID +A  R + S    V  R+++QLL  +DGL  R  + ++AATNRPD ID
Sbjct: 270 APSIIFIDEIDAVAPKRDEASG--EVERRMVAQLLTLMDGLESRGQLVILAATNRPDSID 327

Query: 928 PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD 966
            AL RPGR DR + +G P+   R EI +IH R +P   D
Sbjct: 328 MALRRPGRLDREITIGIPDRHGRNEILQIHTRNMPLQPD 366


>gi|448609994|ref|ZP_21660844.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax mucosum
            ATCC BAA-1512]
 gi|445745353|gb|ELZ96820.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax mucosum
            ATCC BAA-1512]
          Length = 742

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/626 (42%), Positives = 365/626 (58%), Gaps = 98/626 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL+ E   +++++ +          LG+ P +GVLLHGPPGTGKT LAR  A+++  +
Sbjct: 191  IGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVANETSAS 250

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251  FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311  AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R E+L     GM  S  D ++  L+  THGFVGAD+ AL  EAA+  LRRY    
Sbjct: 357  PDEEGRKEVLQIHTRGMPLS-DDVDLNNLADDTHGFVGADIEALTKEAAMKALRRY---- 411

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                  L + D  R                  D+P SL+     
Sbjct: 412  ----------------------LPEIDLDR-----------------EDIPPSLID---- 428

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
             R  V           +D  GG     +  A++  LV+  K                   
Sbjct: 429  -RMVVK----------NDDFGGALGEVEPSAMREVLVEIPK------------------- 458

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V W+DVGG  E K ++ E+VEWP    E F R+G   P G+L++GPPG  KTL+A+AVA+
Sbjct: 459  VTWKDVGGLEEPKQKVKESVEWPLTTPEKFSRMGIEAPKGVLLYGPPGTGKTLIAKAVAN 518

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF++V+GP+L SKWVGESEKA+R  F KAR  +P+IIFFDE+D LA  RG E  G 
Sbjct: 519  ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDALAPARGNEM-GN 577

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +VS+RV++QLL ELDGL    NV VIAATNRPD IDPAL+R GRFDRL+ +G P E  RE
Sbjct: 578  NVSERVVNQLLTELDGLEDAGNVMVIAATNRPDMIDPALIRSGRFDRLVLIGQPEEEGRE 637

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            +I  IH +  P + DV++RE+A +++G  G+D+  ICREAAI A+ EN DA  I M+H +
Sbjct: 638  QILDIHTQSSPLAPDVSLREIAEITDGYVGSDLESICREAAIEALRENDDAEEIEMRHFR 697

Query: 1012 TAIRHVQPS----EIHSYKELSAKFQ 1033
             A+  V+P+     +  Y+E+  +F+
Sbjct: 698  KAMESVRPTITEDLMRYYEEIQDQFK 723



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/229 (47%), Positives = 150/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+ARAVA+
Sbjct: 186  ITYEDIGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEEGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            E+ +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EVLQIHTRGMPLSDDVDLNNLADDTHGFVGADIEALTKEAAMKALRRYL 412


>gi|389847822|ref|YP_006350061.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            mediterranei ATCC 33500]
 gi|448617803|ref|ZP_21666263.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            mediterranei ATCC 33500]
 gi|388245128|gb|AFK20074.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            mediterranei ATCC 33500]
 gi|445748171|gb|ELZ99621.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            mediterranei ATCC 33500]
          Length = 742

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 267/626 (42%), Positives = 365/626 (58%), Gaps = 98/626 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL+ E   +++++ +          LG+ P +GVLLHGPPGTGKT LAR  A+++  +
Sbjct: 191  IGGLTNEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLARAVANETSAS 250

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251  FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311  AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL     GM  S  D ++  L+  THGFVGAD+ AL  EAA+  LRRY    
Sbjct: 357  PDEEGRKEILQIHTRGMPLS-DDVDLNNLADDTHGFVGADIEALTKEAAMKALRRY---- 411

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                  L + D  R                  D+P SL+     
Sbjct: 412  ----------------------LPEIDLDR-----------------EDIPPSLID---- 428

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
             R  V           +D  GG     +  A++  LV+  K                   
Sbjct: 429  -RMVVK----------NDDFGGALGEVEPSAMREVLVEIPK------------------- 458

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V W+DVGG  E K ++ E+VEWP    E F R+G   P G+L++GPPG  KTL+A+AVA+
Sbjct: 459  VTWKDVGGLEEPKQKVKESVEWPLTTPEKFNRMGIEAPKGVLLYGPPGTGKTLIAKAVAN 518

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF++V+GP+L SKWVGESEKA+R  F KAR  +P+IIFFDE+D LA  RG +  G 
Sbjct: 519  ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDALAPARGNDM-GN 577

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +VS+RV++QLL ELDGL    NV VIAATNRPD IDPAL+R GRFDRL+ +G P E  RE
Sbjct: 578  NVSERVVNQLLTELDGLEDTGNVMVIAATNRPDMIDPALIRSGRFDRLVLIGQPEEEGRE 637

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            +I  IH +  P + DV++RE+A +++G  G+D+  ICREAAI A+ EN DA  I M+H +
Sbjct: 638  QILDIHTQSSPLAPDVSLREIAEITDGYVGSDLESICREAAIEALRENDDAEEIEMRHFR 697

Query: 1012 TAIRHVQPS----EIHSYKELSAKFQ 1033
             A+  V+P+     +  Y+E+  +F+
Sbjct: 698  KAMESVRPTITEDLMRYYEEIQDQFK 723



 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 108/229 (47%), Positives = 150/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+ARAVA+
Sbjct: 186  ITYEDIGGLTNEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLARAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEEGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVDLNNLADDTHGFVGADIEALTKEAAMKALRRYL 412


>gi|213401803|ref|XP_002171674.1| ribosome biogenesis factor recycling AAA family ATPase
            [Schizosaccharomyces japonicus yFS275]
 gi|211999721|gb|EEB05381.1| ribosome biogenesis factor recycling AAA family ATPase
            [Schizosaccharomyces japonicus yFS275]
          Length = 807

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/608 (41%), Positives = 362/608 (59%), Gaps = 77/608 (12%)

Query: 412  KLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
            K+GGL K+ AIL+D +    +   L     + P +G+LL+GPPGTGKT + R  A ++  
Sbjct: 256  KIGGLQKQIAILRDAVELPLLHPELFEHFHITPPRGILLYGPPGTGKTMILRAVAAETSA 315

Query: 471  NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM 530
             +FTV+GP +V +  GE+E  L ++F+ A  + P+++F+DE+DA+ P R     E   R 
Sbjct: 316  QVFTVDGPSIVGKYLGETESRLRKIFEDARANQPSIIFVDEIDALVPKRTGDVSEAESRT 375

Query: 531  VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
            VAT L L+DG+     V V+AATNRP+SI+ ALRRPGRL++EIEI               
Sbjct: 376  VATFLTLLDGMANAGRVAVVAATNRPNSIDEALRRPGRLEKEIEI--------------G 421

Query: 591  VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
            +P    RL+IL  L   + +SL D ++E L+  +H +VGADLAA+  EAAL  ++R    
Sbjct: 422  IPDKEARLDILKLLFHEVPNSLSDGDIEDLAARSHAYVGADLAAVVREAALRAIKRVIAC 481

Query: 651  QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSL 710
            + S             +   + M +  D    + E +    +SA P  +D          
Sbjct: 482  KQS-------------KVSEEKMDKSVDTDSAVVEDN----NSAIPAVTD---------- 514

Query: 711  PLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVP 770
                                       EK   + ++ V+F  A   VR SAMRE I+E P
Sbjct: 515  ---------------------------EK---VNMDDVEF--ALSSVRQSAMREFIMESP 542

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
             V W  +GGQ EVK +L EA+EWP  H E F ++G  PP GIL++GPPGCSKTL A+A+A
Sbjct: 543  NVTWSQIGGQEEVKQKLKEAIEWPLTHPETFVKLGVTPPKGILLYGPPGCSKTLTAKAIA 602

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G NF+AVKGPEL  K+VGESE+AVR +F KAR  +PS+IFFDEID L   RG   + 
Sbjct: 603  TETGFNFIAVKGPELLQKYVGESERAVRQIFHKARQASPSVIFFDEIDALTTERGGHDNS 662

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
               +DRV++ LL E+DG+    NV V+AATNRPD IDPAL+RPGR DRLLYVGPP+   R
Sbjct: 663  ---NDRVVAALLNEMDGIESLKNVLVLAATNRPDVIDPALMRPGRLDRLLYVGPPDAEAR 719

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHL 1010
              I RI  +++  +SDV + ELA L++GC+GA++  +C++A + A+ EN++A +++  H 
Sbjct: 720  LAILRIQAKRMTFASDVRLEELAQLTDGCSGAEVVAMCQDAGLIAMHENVEAQQVSQAHF 779

Query: 1011 KTAIRHVQ 1018
            + A+++++
Sbjct: 780  EAALKNLR 787



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 138/231 (59%), Gaps = 3/231 (1%)

Query: 768 EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
           E  +V ++ +GG ++    L +AVE P  H E F+     PP GIL++GPPG  KT++ R
Sbjct: 248 EAIRVTFDKIGGLQKQIAILRDAVELPLLHPELFEHFHITPPRGILLYGPPGTGKTMILR 307

Query: 828 AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
           AVA+E       V GP +  K++GE+E  +R +F  ARAN PSIIF DEID L  +  + 
Sbjct: 308 AVAAETSAQVFTVDGPSIVGKYLGETESRLRKIFEDARANQPSIIFVDEIDAL--VPKRT 365

Query: 888 SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            D      R ++  L  LDG+     V V+AATNRP+ ID AL RPGR ++ + +G P++
Sbjct: 366 GDVSEAESRTVATFLTLLDGMANAGRVAVVAATNRPNSIDEALRRPGRLEKEIEIGIPDK 425

Query: 948 TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIE 997
             R +I ++   ++P S SD +I +LA  S    GAD++ + REAA+ AI+
Sbjct: 426 EARLDILKLLFHEVPNSLSDGDIEDLAARSHAYVGADLAAVVREAALRAIK 476



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 138/246 (56%), Gaps = 19/246 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S++GG  +    LK+ I    +   T   LG+ P KG+LL+GPPG  KT  A+  A ++G
Sbjct: 547 SQIGGQEEVKQKLKEAIEWPLTHPETFVKLGVTPPKGILLYGPPGCSKTLTAKAIATETG 606

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ- 528
            N   V GPE++ +  GESE+A+ ++F  A Q++P+V+F DE+DA+   R  GG + S  
Sbjct: 607 FNFIAVKGPELLQKYVGESERAVRQIFHKARQASPSVIFFDEIDALTTER--GGHDNSND 664

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+VA LLN MDG+     VLV+AATNRPD I+PAL RPGRLDR           LL   P
Sbjct: 665 RVVAALLNEMDGIESLKNVLVLAATNRPDVIDPALMRPGRLDR-----------LLYVGP 713

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
              P    RL IL      M  +  D  +E L+  T G  GA++ A+C +A L+ +    
Sbjct: 714 ---PDAEARLAILRIQAKRMTFA-SDVRLEELAQLTDGCSGAEVVAMCQDAGLIAMHENV 769

Query: 649 KIQTSS 654
           + Q  S
Sbjct: 770 EAQQVS 775


>gi|448577989|ref|ZP_21643424.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            larsenii JCM 13917]
 gi|445726530|gb|ELZ78146.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            larsenii JCM 13917]
          Length = 742

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 266/626 (42%), Positives = 365/626 (58%), Gaps = 98/626 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL+ E   +++++ +          LG+ P +GVLLHGPPGTGKT LAR  A+++  +
Sbjct: 191  IGGLTNEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLARAVANETSAS 250

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251  FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311  AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL     GM  S  D  ++ L+  THGFVGAD+ AL  EAA+  LRRY    
Sbjct: 357  PDEEGRKEILQIHTRGMPLS-DDVNLDTLADDTHGFVGADIEALTKEAAMKALRRY---- 411

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                  L + D  R                  D+P SL+     
Sbjct: 412  ----------------------LPEIDLDRE-----------------DIPPSLID---- 428

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
             R  V           +D  GG     +  A++  LV+  K                   
Sbjct: 429  -RMVVK----------NDDFGGALGEVEPSAMREVLVEIPK------------------- 458

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V WEDVGG  + K ++ E+VEWP    E F R+G   P G+L++GPPG  KTL+A+AVA+
Sbjct: 459  VTWEDVGGLEDPKQKVKESVEWPLVTPEKFDRMGIEAPKGVLLYGPPGTGKTLIAKAVAN 518

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF++V+GP+L SKWVGESEKA+R  F KAR  +P+IIFFDE+D LA  RG +  G 
Sbjct: 519  ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDALAPARGNDM-GN 577

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +VS+RV++QLL ELDGL    NV VIAATNRPD IDPAL+R GRFDRL+ +G P E  RE
Sbjct: 578  NVSERVVNQLLTELDGLEDAGNVMVIAATNRPDMIDPALIRSGRFDRLVLIGQPEEEGRE 637

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            +I  IH +  P + DV++RE+A +++G  G+D+  ICREAAI A+ E+ DA  I M+H +
Sbjct: 638  QILDIHTQSSPLAPDVSLREIAEITDGYVGSDLESICREAAIEALRESDDAEEIEMRHFR 697

Query: 1012 TAIRHVQPS----EIHSYKELSAKFQ 1033
             A+  V+P+     +  Y+E+  +F+
Sbjct: 698  KAMESVRPTITEDLMRYYEEIQDQFK 723



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 150/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+ARAVA+
Sbjct: 186  ITYEDIGGLTNEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLARAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEEGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVNLDTLADDTHGFVGADIEALTKEAAMKALRRYL 412


>gi|319411987|emb|CBQ74030.1| related to AFG2-ATPase of the CDC48/PAS1/SEC18 (AAA) family
            [Sporisorium reilianum SRZ2]
          Length = 862

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 269/673 (39%), Positives = 379/673 (56%), Gaps = 130/673 (19%)

Query: 405  TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
            T E   SKLGGL ++ A +K +I +           GL+P KGVLL+GPPGTGKTSLAR 
Sbjct: 241  TKEDPYSKLGGLDRQIAEIKTLIEMPLMSPEIFVQYGLKPPKGVLLYGPPGTGKTSLARA 300

Query: 464  CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK--- 520
             A  +G +  T+NGPE+ S  +GE+E  L  +F  A + +P ++ IDE+DA+AP R+   
Sbjct: 301  VAAATGSSYLTINGPELSSAFHGETESKLRNIFREARRKSPCIIIIDEIDALAPRREGGS 360

Query: 521  ------DGGEELSQRMVATLLNLMDG----------------------------VCRTDG 546
                  DG  E+ +R+VA LL L+DG                            V RT  
Sbjct: 361  GQGANTDGAGEVERRVVAQLLTLLDGMEEADDDDDDDDTKQDDGGETAEKQSTAVKRTTS 420

Query: 547  ------VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI 600
                  V+V+AATNRP++I+PALRRPGRLDREIEI               +P+ A R +I
Sbjct: 421  AKAPARVVVLAATNRPNAIDPALRRPGRLDREIEI--------------GIPTAAARGDI 466

Query: 601  LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHS 659
            +  L+  + H L   +++ L+  THG+VGADL+AL  EA +  +RR +++ Q+ SD    
Sbjct: 467  IRTLIRSVPHELTQQQIDELAGRTHGYVGADLSALVREAGMRAVRRTFARRQSESD---- 522

Query: 660  TGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEI 719
                 + E     M  D+  +                                  T +E 
Sbjct: 523  -----QLEAKVQAMSLDASTT----------------------------------TTTEN 543

Query: 720  ADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG 779
            A N  + + D              K+   D   A   VRPSAMRE+ LE PKV W D+ G
Sbjct: 544  ASNAVDTILD--------------KVTAADLHAALSLVRPSAMREIFLEPPKVYWSDIAG 589

Query: 780  Q-------------REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
                          + V++Q+ E VEWP KH  AF R+G  PP G+L++GPPGCSKTL+A
Sbjct: 590  SSTPSAGGSGALSTKSVQSQVRELVEWPIKHAAAFARLGVSPPRGVLLYGPPGCSKTLIA 649

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            RA+A+E+GLNFLAVKGPELFSK+VGESE+A+R +F KARA APSI+F DEID L++ R  
Sbjct: 650  RALATESGLNFLAVKGPELFSKYVGESERAIRDMFRKARAAAPSIVFLDEIDALSSSRDD 709

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
             S G  ++ R+++ LL E+DG+    +V VI ATNRP  +DPALLRPGR DRL+YVGPP+
Sbjct: 710  ASGGDVLNSRIIATLLNEMDGIEAMSDVIVIGATNRPQSLDPALLRPGRLDRLVYVGPPD 769

Query: 947  ETDREEIFRIHLRKIPCSSD-VNIRELACLSEGCTGADISLICREAAISAIEENLDASRI 1005
               R +I R  + K+  S++ V++ +LA L+ GC+GA++  +C+EA + A++E+L  + I
Sbjct: 770  HAARMQILRTRMAKMAVSAEAVDVDKLAQLTHGCSGAEVVAVCQEAGLLAMDEDLQCTAI 829

Query: 1006 TMQHLKTAIRHVQ 1018
              +H ++A   V+
Sbjct: 830  EQRHFESAALSVK 842


>gi|448592983|ref|ZP_21652030.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            elongans ATCC BAA-1513]
 gi|445731009|gb|ELZ82596.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            elongans ATCC BAA-1513]
          Length = 742

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/626 (42%), Positives = 365/626 (58%), Gaps = 98/626 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL+ E   +++++ +          LG+ P +GVLLHGPPGTGKT LAR  A+++  +
Sbjct: 191  IGGLTNEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLARAVANETSAS 250

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251  FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311  AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL     GM  S  D  ++ L+  THGFVGAD+ AL  EAA+  LRRY    
Sbjct: 357  PDEEGRKEILQIHTRGMPLS-DDVNLDSLADDTHGFVGADIEALTKEAAMKALRRY---- 411

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                  L + D  R                  D+P SL+     
Sbjct: 412  ----------------------LPEIDLDR-----------------EDIPPSLID---- 428

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
             R  V           +D  GG     +  A++  LV+  K                   
Sbjct: 429  -RMVVK----------NDDFGGALGEVEPSAMREVLVEIPK------------------- 458

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V W+DVGG  + K ++ E+VEWP    E F R+G   P G+L++GPPG  KTL+A+AVA+
Sbjct: 459  VTWDDVGGLEDPKQKVKESVEWPLVTPEKFDRMGIEAPKGVLLYGPPGTGKTLIAKAVAN 518

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF++V+GP+L SKWVGESEKA+R  F KAR  +P+IIFFDE+D LA  RG +  G 
Sbjct: 519  ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDALAPARGNDM-GN 577

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +VS+RV++QLL ELDGL    NV VIAATNRPD IDPAL+R GRFDRL+ +G P E  RE
Sbjct: 578  NVSERVVNQLLTELDGLEDAGNVMVIAATNRPDMIDPALIRSGRFDRLVLIGQPEEEGRE 637

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            +I  IH +  P + DV++RE+A +++G  G+D+  ICREAAI A+ E+ +A  I M+H +
Sbjct: 638  QILDIHTQSTPLAPDVSLREIAEITDGYVGSDLESICREAAIEALREDDEAEEIEMRHFR 697

Query: 1012 TAIRHVQPS----EIHSYKELSAKFQ 1033
             A+  V+P+     +  Y+E+  +F+
Sbjct: 698  KAMEAVRPTITEDLMRYYEEIQDQFK 723



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 150/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+ARAVA+
Sbjct: 186  ITYEDIGGLTNEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLARAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEEGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVNLDSLADDTHGFVGADIEALTKEAAMKALRRYL 412


>gi|315231037|ref|YP_004071473.1| cell division FtsH-like protein [Thermococcus barophilus MP]
 gi|315184065|gb|ADT84250.1| cell division FtsH-like protein [Thermococcus barophilus MP]
          Length = 796

 Score =  471 bits (1212), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/755 (37%), Positives = 421/755 (55%), Gaps = 103/755 (13%)

Query: 310  SWLYSR----SLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNA 365
             WL+SR     ++ G+ + + +L +   F+V      PA +       Q+TE  D     
Sbjct: 114  DWLHSRLIGRPVVRGDYIKIGVLGQELTFVVTATT--PAGIV------QITEFTD----- 160

Query: 366  FVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKD 425
            F ++ +       P+  V+K+   G      + ++++           GGL      +++
Sbjct: 161  FTVSEK-------PVKEVAKTAALG------VTYEDI-----------GGLKDVIQKIRE 196

Query: 426  II-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQN 484
            +I +          LG+ P KGVLL+GPPGTGKT LA+  A+++  +   +NGPE++S+ 
Sbjct: 197  MIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKY 256

Query: 485  YGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRT 544
            YGESE+ L EVF  A ++AP+++FIDE+DAIAP R +   E+ +R+VA LL LMDG+   
Sbjct: 257  YGESEERLREVFKEAEENAPSIIFIDEIDAIAPKRGEVTGEVEKRVVAQLLALMDGLKSR 316

Query: 545  DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL 604
              V+VI ATNRPD+++PALRRPGR DREIE+               VP    R EIL   
Sbjct: 317  GKVIVIGATNRPDALDPALRRPGRFDREIEV--------------GVPDRQGRKEILQIH 362

Query: 605  LSGM--EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGT 662
              GM  E     SEV+ +     G  G +        A+  + R    +   D+L +   
Sbjct: 363  TRGMPIEPEFRKSEVKRI---LEGLRGDERFRDIINRAIEKVERAKDEKEIQDILKNLDE 419

Query: 663  -LFEFEGHS--DTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEI 719
             L++   H   D +L++      + + +   + +     +          L   G +   
Sbjct: 420  RLYDEVKHRLIDALLEE------LADKTHGFVGADLAALAREAAMAALRRLIKEGKIDFE 473

Query: 720  ADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG 779
            A++    V +             LK+   DF +A   + PSA+REV+LE+P V+W+D+GG
Sbjct: 474  AEHIPKEVLEE------------LKVTKRDFYEALKMIEPSALREVLLEIPNVRWDDIGG 521

Query: 780  QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLA 839
              EVK  L EAVEWP K+ EAF+ +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+ 
Sbjct: 522  LEEVKEALREAVEWPLKYPEAFQALGINPPKGILLYGPPGTGKTLLAKAVATESEANFIG 581

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMS 899
            ++GPE+ SKWVGESEK +R +F KAR  AP++IF DEID +A  RG  +D   V+DR+++
Sbjct: 582  IRGPEVLSKWVGESEKNIREIFRKARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRLIN 639

Query: 900  QLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR 959
            QLL E+DG+ +   V VIAATNRPD +DPALLRPGRFDRL+ V  P+E  R EIF++H R
Sbjct: 640  QLLTEMDGIEENSGVVVIAATNRPDILDPALLRPGRFDRLILVPAPDEKARYEIFKVHTR 699

Query: 960  KIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS---------------R 1004
            K+P S DV+++ELA  +EG TGADI+ +CREAA++A+   L                  +
Sbjct: 700  KMPLSEDVDLKELAKRTEGYTGADIAAVCREAAMNAMRRALKEGIIKPGVKMDEVKQKVK 759

Query: 1005 ITMQHLKTAIRHVQPS----EIHSYKELSAKFQRL 1035
            +TM+  + A+  V PS     +  YK++  +F+++
Sbjct: 760  VTMKDFEEALEKVGPSVSKETMEYYKKIEEQFKKM 794


>gi|448623306|ref|ZP_21669849.1| cell division control protein 48 [Haloferax denitrificans ATCC 35960]
 gi|445752708|gb|EMA04130.1| cell division control protein 48 [Haloferax denitrificans ATCC 35960]
          Length = 743

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/626 (42%), Positives = 366/626 (58%), Gaps = 98/626 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL+ E   +++++ +          LG+ P +GVLLHGPPGTGKT LAR  A+++  +
Sbjct: 191  IGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVANETSAS 250

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251  FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311  AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL     GM  S    +++ L+  THGFVGAD+ AL  EAA+  LRRY    
Sbjct: 357  PDEEGRKEILQIHTRGMPLSDD-VDLDDLADDTHGFVGADIEALTKEAAMKALRRY---- 411

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                  L + D  R                  D+P SL+     
Sbjct: 412  ----------------------LPEIDLDRE-----------------DIPPSLID---- 428

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
             R  V           +D  GG     +  A++  LV+  K                   
Sbjct: 429  -RMVVK----------NDDFGGALGEVEPSAMREVLVEIPK------------------- 458

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V WEDVGG    K ++ E+VEWP    E F+R+G   P G+L++GPPG  KTL+A+AVA+
Sbjct: 459  VTWEDVGGLEGPKQKVQESVEWPLTTPEKFQRMGIEAPKGVLLYGPPGTGKTLIAKAVAN 518

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF++V+GP+L SKWVGESEKA+R  F KAR  +P+IIFFDE+D LA  RG +  G 
Sbjct: 519  ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDALAPARGNDM-GN 577

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +VS+RV++QLL ELDGL    NV VIAATNRPD IDPAL+R GRFDRL+ +G P E  RE
Sbjct: 578  NVSERVVNQLLTELDGLEDAGNVMVIAATNRPDMIDPALIRSGRFDRLVLIGQPAEEGRE 637

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            +I  IH ++ P + DV++RE+A +++G  G+D+  ICREAAI A+ E+ DA  I M+H +
Sbjct: 638  QILDIHTQQSPLAPDVSLREIAEITDGYVGSDLESICREAAIEALREDSDAEEIEMRHFR 697

Query: 1012 TAIRHVQPS----EIHSYKELSAKFQ 1033
             A+  V+P+     +  Y+++  +F+
Sbjct: 698  KAMESVRPTITEELMRYYEDIQDQFK 723



 Score =  209 bits (532), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+ARAVA+
Sbjct: 186  ITYEDIGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEEGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++ +LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVDLDDLADDTHGFVGADIEALTKEAAMKALRRYL 412


>gi|448565733|ref|ZP_21636600.1| cell division control protein 48 [Haloferax prahovense DSM 18310]
 gi|448583797|ref|ZP_21647020.1| cell division control protein 48 [Haloferax gibbonsii ATCC 33959]
 gi|445715477|gb|ELZ67233.1| cell division control protein 48 [Haloferax prahovense DSM 18310]
 gi|445729150|gb|ELZ80749.1| cell division control protein 48 [Haloferax gibbonsii ATCC 33959]
          Length = 743

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/626 (42%), Positives = 366/626 (58%), Gaps = 98/626 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL+ E   +++++ +          LG+ P +GVLLHGPPGTGKT LAR  A+++  +
Sbjct: 191  IGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVANETSAS 250

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251  FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311  AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL     GM  S    +++ L+  THGFVGAD+ AL  EAA+  LRRY    
Sbjct: 357  PDEEGRKEILQIHTRGMPLSDD-VDLDDLADDTHGFVGADIEALTKEAAMKALRRY---- 411

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                  L + D  R                  D+P SL+     
Sbjct: 412  ----------------------LPEIDLDRE-----------------DIPPSLID---- 428

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
             R  V           +D  GG     +  A++  LV+  K                   
Sbjct: 429  -RMVVK----------NDDFGGALGEVEPSAMREVLVEIPK------------------- 458

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V WEDVGG    K ++ E+VEWP    E F+R+G   P G+L++GPPG  KTL+A+AVA+
Sbjct: 459  VTWEDVGGLEGPKQKVQESVEWPLTTPEKFERMGIEAPKGVLLYGPPGTGKTLIAKAVAN 518

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF++V+GP+L SKWVGESEKA+R  F KAR  +P+IIFFDE+D LA  RG +  G 
Sbjct: 519  ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDALAPARGNDM-GN 577

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +VS+RV++QLL ELDGL    NV VIAATNRPD IDPAL+R GRFDRL+ +G P E  RE
Sbjct: 578  NVSERVVNQLLTELDGLEDAGNVMVIAATNRPDMIDPALIRSGRFDRLVLIGQPAEEGRE 637

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            +I  IH ++ P + DV++RE+A +++G  G+D+  ICREAAI A+ E+ DA  I M+H +
Sbjct: 638  QILDIHTQRSPLAPDVSLREIAEITDGYVGSDLESICREAAIEALREDSDAEEIEMRHFR 697

Query: 1012 TAIRHVQPS----EIHSYKELSAKFQ 1033
             A+  V+P+     +  Y+++  +F+
Sbjct: 698  KAMESVRPTITEELMRYYEDIQDQFK 723



 Score =  209 bits (532), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+ARAVA+
Sbjct: 186  ITYEDIGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEEGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++ +LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVDLDDLADDTHGFVGADIEALTKEAAMKALRRYL 412


>gi|448604770|ref|ZP_21657815.1| cell division control protein 48 [Haloferax sulfurifontis ATCC
            BAA-897]
 gi|445743091|gb|ELZ94574.1| cell division control protein 48 [Haloferax sulfurifontis ATCC
            BAA-897]
          Length = 743

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/626 (42%), Positives = 365/626 (58%), Gaps = 98/626 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL+ E   +++++ +          LG+ P +GVLLHGPPGTGKT LAR  A+++  +
Sbjct: 191  IGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVANETSAS 250

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251  FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311  AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL     GM  S    +++ L+  THGFVGAD+ AL  EAA+  LRRY    
Sbjct: 357  PDEEGRKEILQIHTRGMPLSDD-VDLDDLADDTHGFVGADIEALTKEAAMKALRRY---- 411

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                  L + D  R                  D+P SL+     
Sbjct: 412  ----------------------LPEIDLDR-----------------EDIPPSLID---- 428

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
             R  V           +D  GG     +  A++  LV+  K                   
Sbjct: 429  -RMVVK----------NDDFGGALGEVEPSAMREVLVEIPK------------------- 458

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V W DVGG    K ++ E+VEWP    E F+R+G   P G+L++GPPG  KTL+A+AVA+
Sbjct: 459  VTWNDVGGLEGPKQKVQESVEWPLTTPEKFQRMGIEAPKGVLLYGPPGTGKTLIAKAVAN 518

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF++V+GP+L SKWVGESEKA+R  F KAR  +P+IIFFDE+D LA  RG +  G 
Sbjct: 519  ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDALAPARGNDM-GN 577

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +VS+RV++QLL ELDGL    NV VIAATNRPD IDPAL+R GRFDRL+ +G P E  RE
Sbjct: 578  NVSERVVNQLLTELDGLEDAGNVMVIAATNRPDMIDPALIRSGRFDRLVLIGQPEEEGRE 637

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            +I  IH ++ P + DV++RE+A +++G  G+D+  ICREAAI A+ E+ DA  I M+H +
Sbjct: 638  QILDIHTQQSPLAPDVSLREIAEITDGYVGSDLESICREAAIEALREDSDAEEIEMRHFR 697

Query: 1012 TAIRHVQPS----EIHSYKELSAKFQ 1033
             A+  V+P+     +  Y+++  +F+
Sbjct: 698  KAMESVRPTITEELMRYYEDIQDQFK 723



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+ARAVA+
Sbjct: 186  ITYEDIGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEEGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++ +LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVDLDDLADDTHGFVGADIEALTKEAAMKALRRYL 412


>gi|337283526|ref|YP_004623000.1| cell division control protein [Pyrococcus yayanosii CH1]
 gi|334899460|gb|AEH23728.1| cell division control protein [Pyrococcus yayanosii CH1]
          Length = 836

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/681 (40%), Positives = 379/681 (55%), Gaps = 92/681 (13%)

Query: 391  TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
             LP A ++  + V     +DI   GGL      +++++ +          LG+ P KGVL
Sbjct: 192  VLPQAVEVREEKVPEVTYEDI---GGLKDAIEKIREMVELPLKHPELFERLGIEPPKGVL 248

Query: 449  LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
            L+GPPGTGKT LA+  A+++  +   +NGPE++S+ YGESE+ L +VF  A ++AP+++F
Sbjct: 249  LYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKYYGESEERLRQVFKEAEENAPSIIF 308

Query: 509  IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
            IDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+I+PALRRPGR
Sbjct: 309  IDEIDAIAPKREEVIGEVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGR 368

Query: 569  LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM-------------------- 608
             DREIE+               VP    R EIL     GM                    
Sbjct: 369  FDREIEV--------------GVPDKQGRKEILQIHTRGMPIEPDFDKDTVLRILRELKL 414

Query: 609  EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEG 668
            E  L    +E L     G       A   E     L+ Y +I +            E + 
Sbjct: 415  EDRLDGKRIEVLERKIQG-------AKTEEEVKEILKEYGEIYS------------EVKA 455

Query: 669  HSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVS 728
                 L D    R       D    A      +   L+       G ++  AD+    V 
Sbjct: 456  RLIDRLLDELAERTHGFVGADLAALAREAAMVVLRRLIRE-----GKINPEADSIPREVL 510

Query: 729  DSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLM 788
            +             LK+   DF +A   V PSA+REV++EVP V+W+D+GG  EVK +L 
Sbjct: 511  EE------------LKVTRKDFYEALKMVEPSALREVLIEVPNVRWDDIGGLEEVKQELR 558

Query: 789  EAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSK 848
            EAVEWP K+ +AFKR+G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A++GPE+ SK
Sbjct: 559  EAVEWPFKYPKAFKRLGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSK 618

Query: 849  WVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGL 908
            WVGESEK +R +F KAR  AP+IIF DEID +A  RG   +G  V+DR+++QLL E+DG+
Sbjct: 619  WVGESEKRIREIFRKARQAAPAIIFIDEIDAIAPARGA-VEGERVTDRLINQLLTEMDGI 677

Query: 909  HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN 968
             +   V VIAATNRPD +DPALLRPGRFDRL+ V  P+E  R EIFR+H R +P + DVN
Sbjct: 678  EENSGVVVIAATNRPDILDPALLRPGRFDRLILVPAPDERARLEIFRVHTRNMPLAKDVN 737

Query: 969  IRELACLSEGCTGADISLICREAAISAI----------------EENLDASRITMQHLKT 1012
            + ELA  +EG TGADI+ + REAA++A+                EE L    +T +  + 
Sbjct: 738  LEELAKKTEGYTGADIAALVREAALNAMRRVLLTLPKRLVEEENEEFLGKLVVTRKDFEE 797

Query: 1013 AIRHVQPSEIHSYKELSAKFQ 1033
            A++ V+PS      E   +F+
Sbjct: 798  ALKRVKPSVTKYMMEYYRQFE 818



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 190/327 (58%), Gaps = 35/327 (10%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            ++V P A+     +VP+V +ED+GG ++   ++ E VE P KH E F+R+G  PP G+L+
Sbjct: 190  VEVLPQAVEVREEKVPEVTYEDIGGLKDAIEKIREMVELPLKHPELFERLGIEPPKGVLL 249

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+A+AVA+EA  +F+A+ GPE+ SK+ GESE+ +R +F +A  NAPSIIF 
Sbjct: 250  YGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKYYGESEERLRQVFKEAEENAPSIIFI 309

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV+SQLL  +DGL  R  V VIAATNRPD IDPAL RPG
Sbjct: 310  DEIDAIAPKR-EEVIG-EVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPG 367

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL-ICREAAI 993
            RFDR + VG P++  R+EI +IH R +P   D +              D  L I RE   
Sbjct: 368  RFDREIEVGVPDKQGRKEILQIHTRGMPIEPDFD-------------KDTVLRILREL-- 412

Query: 994  SAIEENLDASRI-----TMQHLKT--AIRHVQPSEIHSYKELSAKF-QRLVHSNAEADES 1045
              +E+ LD  RI      +Q  KT   ++ +       Y E+ A+   RL+   AE    
Sbjct: 413  -KLEDRLDGKRIEVLERKIQGAKTEEEVKEILKEYGEIYSEVKARLIDRLLDELAE---- 467

Query: 1046 GYQLRPSKSIGSNMWTLIKSISLFLCR 1072
                R    +G+++  L +  ++ + R
Sbjct: 468  ----RTHGFVGADLAALAREAAMVVLR 490


>gi|292656507|ref|YP_003536404.1| cell division control protein 48 [Haloferax volcanii DS2]
 gi|448290507|ref|ZP_21481655.1| cell division control protein 48 [Haloferax volcanii DS2]
 gi|448545633|ref|ZP_21626132.1| cell division control protein 48 [Haloferax sp. ATCC BAA-646]
 gi|448547834|ref|ZP_21627220.1| cell division control protein 48 [Haloferax sp. ATCC BAA-645]
 gi|448556739|ref|ZP_21632333.1| cell division control protein 48 [Haloferax sp. ATCC BAA-644]
 gi|448569441|ref|ZP_21638701.1| cell division control protein 48 [Haloferax lucentense DSM 14919]
 gi|448600110|ref|ZP_21655823.1| cell division control protein 48 [Haloferax alexandrinus JCM 10717]
 gi|291371302|gb|ADE03529.1| cell division control protein 48 [Haloferax volcanii DS2]
 gi|445578417|gb|ELY32822.1| cell division control protein 48 [Haloferax volcanii DS2]
 gi|445703959|gb|ELZ55880.1| cell division control protein 48 [Haloferax sp. ATCC BAA-646]
 gi|445715645|gb|ELZ67400.1| cell division control protein 48 [Haloferax sp. ATCC BAA-645]
 gi|445716088|gb|ELZ67839.1| cell division control protein 48 [Haloferax sp. ATCC BAA-644]
 gi|445724574|gb|ELZ76206.1| cell division control protein 48 [Haloferax lucentense DSM 14919]
 gi|445735520|gb|ELZ87069.1| cell division control protein 48 [Haloferax alexandrinus JCM 10717]
          Length = 743

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/626 (42%), Positives = 365/626 (58%), Gaps = 98/626 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL+ E   +++++ +          LG+ P +GVLLHGPPGTGKT LAR  A+++  +
Sbjct: 191  IGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVANETSAS 250

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251  FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311  AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL     GM  S    +++ L+  THGFVGAD+ AL  EAA+  LRRY    
Sbjct: 357  PDEEGRKEILQIHTRGMPLSDD-VDLDDLADDTHGFVGADIEALTKEAAMKALRRY---- 411

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                  L + D  R                  D+P SL+     
Sbjct: 412  ----------------------LPEIDLDR-----------------EDIPPSLID---- 428

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
             R  V           +D  GG     +  A++  LV+  K                   
Sbjct: 429  -RMVVK----------NDDFGGALGEVEPSAMREVLVEIPK------------------- 458

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V W DVGG    K ++ E+VEWP    E F+R+G   P G+L++GPPG  KTL+A+AVA+
Sbjct: 459  VTWNDVGGLEGPKQKVQESVEWPLTTPEKFQRMGIEAPKGVLLYGPPGTGKTLIAKAVAN 518

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF++V+GP+L SKWVGESEKA+R  F KAR  +P+IIFFDE+D LA  RG +  G 
Sbjct: 519  ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDALAPARGNDM-GN 577

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +VS+RV++QLL ELDGL    NV VIAATNRPD IDPAL+R GRFDRL+ +G P E  RE
Sbjct: 578  NVSERVVNQLLTELDGLEDAGNVMVIAATNRPDMIDPALIRSGRFDRLVLIGQPEEEGRE 637

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            +I  IH ++ P + DV++RE+A +++G  G+D+  ICREAAI A+ E+ DA  I M+H +
Sbjct: 638  QILDIHTQQSPLAPDVSLREIAEITDGYVGSDLESICREAAIEALREDSDAEEIEMRHFR 697

Query: 1012 TAIRHVQPS----EIHSYKELSAKFQ 1033
             A+  V+P+     +  Y+++  +F+
Sbjct: 698  KAMESVRPTITEELMRYYEDIQDQFK 723



 Score =  209 bits (532), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+ARAVA+
Sbjct: 186  ITYEDIGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEEGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++ +LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVDLDDLADDTHGFVGADIEALTKEAAMKALRRYL 412


>gi|20092335|ref|NP_618410.1| cell division control protein 48 AAA family protein [Methanosarcina
            acetivorans C2A]
 gi|19917582|gb|AAM06890.1| cell division control protein 48 AAA family protein [Methanosarcina
            acetivorans C2A]
          Length = 786

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/643 (40%), Positives = 375/643 (58%), Gaps = 68/643 (10%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL +E   +++II +        + L + P KGV+L+GPPGTGKT +A+  A++SG +
Sbjct: 200  IGGLGQEIMRVREIIEMPMKHPELFAHLNIEPPKGVILYGPPGTGKTLIAKAVANESGAS 259

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
               + GPE+V + YGESE+ L ++F+ A+Q AP+V+FIDE+D+IAP R++   E+ +R+V
Sbjct: 260  FHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEIDSIAPKRENVTGEVERRVV 319

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL L+DG+     V+VI ATNR D+I+PALRRPGR DREI I               V
Sbjct: 320  AQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDREIHI--------------GV 365

Query: 592  PSPAQRLEILHALLSGM------EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            P    R EIL     GM      E +  +SEVE            +     +EAAL    
Sbjct: 366  PDTKDRYEILQIHTRGMPIEKDDEITPAESEVELEEATE-----IEAEIEVDEAAL---E 417

Query: 646  RYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
            R  K +T+  +++       F G        +D    + E++  CL    P   DL   L
Sbjct: 418  REKKEKTNRYLMYLAEKTQGFVG--------ADLLALVQEAAMRCLRENLP---DL--DL 464

Query: 706  LSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREV 765
               ++P                          E+   + +   +FE A M+  PSA+RE+
Sbjct: 465  EKETIP-------------------------PERLEKIVVTKKNFEDALMEAEPSALREI 499

Query: 766  ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
             +E+P V W+ VGG  E K  ++EAVEWP K+ E F ++G + P GIL++GPPG  KTL+
Sbjct: 500  FVEMPSVGWDGVGGLDEAKNAIIEAVEWPIKNPEKFVKLGIKAPKGILLYGPPGTGKTLI 559

Query: 826  ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
            A+AVA E+  NF++VKGPE+FSKW+GESEKA+R  F KAR  AP ++FFDEID +AA++G
Sbjct: 560  AQAVAKESNANFISVKGPEMFSKWLGESEKAIRETFKKARQVAPCVVFFDEIDSIAAMQG 619

Query: 886  KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
             ES     S+RV++QLL E+DGL    +V +IAATNRP+ +DPA++RPGRFDRL+YVG P
Sbjct: 620  MESTDSRTSERVLNQLLTEMDGLETLKDVVIIAATNRPNLLDPAIMRPGRFDRLVYVGAP 679

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI 1005
            +   R +IF+IH R  P + DV++  LA ++EG  GADI  +CREA + A+ EN D   I
Sbjct: 680  DRKGRMKIFKIHTRNTPLAEDVDLENLANITEGYVGADIEAVCREAVMFALRENFDVEAI 739

Query: 1006 TMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAE-ADESGY 1047
             M+H + A++ V+P+   +  +   K +         A+ +GY
Sbjct: 740  EMRHFREALKKVKPTINENIAQFYEKIEEQFKGGQRPAETAGY 782



 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 107/265 (40%), Positives = 151/265 (56%), Gaps = 40/265 (15%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +ED+GG  +   ++ E +E P KH E F  +   PP G++++GPPG  KTL+A+AVA+E+
Sbjct: 197  YEDIGGLGQEIMRVREIIEMPMKHPELFAHLNIEPPKGVILYGPPGTGKTLIAKAVANES 256

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            G +F  + GPE+  K+ GESE+ +R +F +A  +APS+IF DEID +A  R  E+    V
Sbjct: 257  GASFHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEIDSIAPKR--ENVTGEV 314

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++QLL  LDG+ +R  V VI ATNR D IDPAL RPGRFDR +++G P+  DR EI
Sbjct: 315  ERRVVAQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDREIHIGVPDTKDRYEI 374

Query: 954  FRIHLRKIPCSSDVNI---------------------------RE-----------LACL 975
             +IH R +P   D  I                           RE           LA  
Sbjct: 375  LQIHTRGMPIEKDDEITPAESEVELEEATEIEAEIEVDEAALEREKKEKTNRYLMYLAEK 434

Query: 976  SEGCTGADISLICREAAISAIEENL 1000
            ++G  GAD+  + +EAA+  + ENL
Sbjct: 435  TQGFVGADLLALVQEAAMRCLRENL 459


>gi|389853179|ref|YP_006355413.1| cell division protein CDC48 [Pyrococcus sp. ST04]
 gi|388250485|gb|AFK23338.1| cell division protein CDC48 [Pyrococcus sp. ST04]
          Length = 796

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 266/683 (38%), Positives = 382/683 (55%), Gaps = 97/683 (14%)

Query: 393  PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
            P  ++E +       +DI   GGL      ++++I +          LG+ P KGVLL+G
Sbjct: 167  PVKEVEKRMTTGVTYEDI---GGLHDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYG 223

Query: 452  PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
            PPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L EVF  A ++APA++FIDE
Sbjct: 224  PPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDE 283

Query: 512  LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
            +DAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNRPD+I+PALRRPGR DR
Sbjct: 284  IDAIAPKRSEVTGEVEKRVVAQLLALMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDR 343

Query: 572  EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
            EIE+               VP    R EIL     GM                  F   D
Sbjct: 344  EIEV--------------GVPDKQGRKEILQIHTRGMP-------------IEPDFRKVD 376

Query: 632  LAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCL 691
            +  + N+     +++  K                ++   D  ++  D +R+  E  +   
Sbjct: 377  VLRVLND-----IKKEGK----------------YKNIIDDAIKKVDLARDEEEIKKVLR 415

Query: 692  DSASPCTSDLPTSLLSSSLPLRGTVSEIADNF---------------------HNGVSDS 730
            D ++   +++   L+   L     ++E+   F                       G  D 
Sbjct: 416  DISTELYAEVKARLIDQLLE---ELAEVTHGFVGADLAALAREAAMAALRRLIREGKIDF 472

Query: 731  SGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEA 790
                   E    LK+   DF +A   V PSA+REV++EVP V W+D+GG  +VK +L EA
Sbjct: 473  EAESIPREVLEELKVTRKDFYEALKMVEPSALREVLIEVPNVHWDDIGGLEDVKQELREA 532

Query: 791  VEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWV 850
            VEWP K+ EAF+  G  PP GIL++GPPG  KTL+A+AVA+E+  NF+AV+GPE+ SKWV
Sbjct: 533  VEWPLKYPEAFRAYGITPPKGILLYGPPGTGKTLLAKAVATESEANFIAVRGPEILSKWV 592

Query: 851  GESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ 910
            GESEK +R +F KAR  AP++IF DEID +A  RG  +D   V+DR+++QLL E+DGL +
Sbjct: 593  GESEKNIREIFRKARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRIINQLLTEMDGLVE 650

Query: 911  RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIR 970
               V VIAATNRPD IDPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV++ 
Sbjct: 651  NSGVVVIAATNRPDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRNMPLAEDVSLE 710

Query: 971  ELACLSEGCTGADISLICREAAISAIEENLDA---------------SRITMQHLKTAIR 1015
            ELA  +EG TGADI+ +CREAA+ A+   L+                +++TM+  + A++
Sbjct: 711  ELAKKTEGYTGADIAAVCREAAMIAMRRALEQGVLKEGMKAEEIRRIAKVTMKDFEEALK 770

Query: 1016 HVQPS----EIHSYKELSAKFQR 1034
             + PS     +  Y+ +  +F++
Sbjct: 771  KIGPSVSKETMEYYRRIQEQFKQ 793


>gi|409095160|ref|ZP_11215184.1| cell division protein CDC48 [Thermococcus zilligii AN1]
          Length = 797

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 277/670 (41%), Positives = 384/670 (57%), Gaps = 69/670 (10%)

Query: 398  EFQNVQATVEQDISK---LGGLSKEYAILKDII------ISSSVK--STLSSLGLRPTKG 446
            EFQ  +  V  ++SK   LG   ++   LKD+I      I   +K       LG+ P KG
Sbjct: 160  EFQVSEKPV-TEVSKTTTLGVTYEDIGGLKDVIQKVREMIELPLKHPELFERLGIEPPKG 218

Query: 447  VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 506
            VLL+GPPGTGKT LA+  A+++  +   +NGPE++S+ YGESE+ L EVF  A ++APA+
Sbjct: 219  VLLYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKFYGESEERLREVFKEAEENAPAI 278

Query: 507  VFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRP 566
            +FIDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VI ATNRPD+I+PALRRP
Sbjct: 279  IFIDEIDAIAPKREEVSGEVEKRVVSQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRP 338

Query: 567  GRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLLDSEV-EYLSMA 623
            GR DRE+E+               VP    R EIL     GM  E     S+V E L   
Sbjct: 339  GRFDRELEV--------------GVPDKQGRREILQIHTRGMPIEPEFRKSKVIEILEEL 384

Query: 624  THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNI 683
                   D A    E AL+ +++    +     L  T          D  L D   ++ I
Sbjct: 385  ERSETYRDAA----EKALMKIKKAESEEEIKKALRET----------DERLYDEVKAKLI 430

Query: 684  TESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCAL 743
                   LD  +  T         ++L     ++ +      G  D        E    L
Sbjct: 431  DA----LLDELAEVTHGF-VGADLAALAREAAMAALRRLIQEGKIDFEAEQIPREVLEEL 485

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            K+   DF +A   V PSA+REV++EVP V+W+D+GG  EVK +L EAVEWP K+ EAF  
Sbjct: 486  KVTRKDFYEALKMVEPSALREVLIEVPNVRWDDIGGLEEVKQELREAVEWPLKYPEAFMG 545

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A+KGPE+ SKWVGESEK VR +F K
Sbjct: 546  LGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNVREIFRK 605

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            AR  AP++IF DEID +A  RG  +D   V+DR++ QLL E+DG+ +   V VI ATNRP
Sbjct: 606  ARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRLIDQLLTEMDGIQENSGVVVIGATNRP 663

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            D IDPALLRPGRFDRL+ V  P+E  R EIF++H RK+P + DV++ ELA  +EG TGAD
Sbjct: 664  DIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRKVPLAEDVSLEELAKRTEGYTGAD 723

Query: 984  ISLICREAAISAIEENLDAS---------------RITMQHLKTAIRHVQPS----EIHS 1024
            I  + REAA+ A+ + L                  ++TM+  + A++ + PS     +  
Sbjct: 724  IEAVVREAAMLAMRKALQEGIIRPGMKADEIRQKVKVTMKDFEEALKKIGPSVSRETMEY 783

Query: 1025 YKELSAKFQR 1034
            Y+ +  +F++
Sbjct: 784  YRRIQEQFKQ 793


>gi|57641092|ref|YP_183570.1| cell division protein CDC48 [Thermococcus kodakarensis KOD1]
 gi|57159416|dbj|BAD85346.1| CDC48/VCP homolog, AAA superfamily [Thermococcus kodakarensis KOD1]
          Length = 796

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 280/755 (37%), Positives = 414/755 (54%), Gaps = 105/755 (13%)

Query: 310  SWLYSR----SLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNA 365
             WL+SR     ++ G+ + + +L +   F+V      PA +       Q+TE  D     
Sbjct: 114  EWLHSRLVGRPVVRGDYIKIGILGQELTFVVTATT--PAGIV------QITEFTD----- 160

Query: 366  FVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKD 425
            F ++ +       P+  VSK+   G      + ++++           GGL      +++
Sbjct: 161  FQVSEK-------PVKEVSKATALG------VTYEDI-----------GGLKDVIQKVRE 196

Query: 426  II-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQN 484
            +I +          LG+ P KGVLL+GPPGTGKT LA+  A+++  +   +NGPE++S+ 
Sbjct: 197  MIELPLKHPELFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKY 256

Query: 485  YGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRT 544
            YGESE+ L EVF  A ++APA++FIDE+D+IAP R++   E+ +R+V+ LL LMDG+   
Sbjct: 257  YGESEERLREVFKEAEENAPAIIFIDEIDSIAPKREETHGEVEKRVVSQLLTLMDGLKSR 316

Query: 545  DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL 604
              V+VI ATNRPD+I+PALRRPGR DREIE+               VP    R EIL   
Sbjct: 317  GKVIVIGATNRPDAIDPALRRPGRFDREIEV--------------GVPDKQGRKEILQIH 362

Query: 605  LSGME---HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG 661
              GM        D  +E L          D      E A++ +++    +    +L  T 
Sbjct: 363  TRGMPIEPEFRRDKVIEILEELEKN----DTYREAAERAIMKVKKAKDEEEIRRILRETD 418

Query: 662  TLFEFEGHS---DTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSE 718
                 E  +   D +L +      + E +   + +     +          L   G +  
Sbjct: 419  EKLYEEVRAKLIDALLDE------LAEVTHGFVGADLAALAREAAMAALRRLINEGKIDF 472

Query: 719  IADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVG 778
             A+     V D             LK+   DF +A   V PSA+REV+LEVP V+W+D+G
Sbjct: 473  EAEYIPKEVLDE------------LKVTRRDFYEALKMVEPSALREVLLEVPNVRWDDIG 520

Query: 779  GQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFL 838
            G  +VK +L EAVEWP K+ EAF  +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+
Sbjct: 521  GLEDVKQELREAVEWPLKYPEAFMGLGITPPKGILLYGPPGTGKTLLAKAVANESEANFI 580

Query: 839  AVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVM 898
            A+KGPE+ SKWVGESEK +R +F KAR  AP++IF DEID +A  RG  +D   V+DR++
Sbjct: 581  AIKGPEVLSKWVGESEKNIREIFRKARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRLI 638

Query: 899  SQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            +QLL E+DG+ +   V VI ATNRPD IDPALLRPGRFDRL+ V  P+E  R EIF++H 
Sbjct: 639  NQLLTEMDGIQENSGVVVIGATNRPDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHT 698

Query: 959  RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--------------- 1003
            R++P + DV++RELA  +EG TGADI+ + REAA+ A+   L                  
Sbjct: 699  RRVPLAGDVDLRELAKKTEGYTGADIAAVVREAAMLAMRRALQEGIIRPGMKADEIRGKV 758

Query: 1004 RITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            ++TM+  + A++ + PS     +  Y+++  +F++
Sbjct: 759  KVTMKDFEEALKKIGPSVSKETMEYYRKIQEQFKQ 793


>gi|14591590|ref|NP_143672.1| cell division control [Pyrococcus horikoshii OT3]
 gi|3258278|dbj|BAA30961.1| 798aa long hypothetical transitional endoplasmic reticulum ATPase
            [Pyrococcus horikoshii OT3]
          Length = 798

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/671 (38%), Positives = 388/671 (57%), Gaps = 74/671 (11%)

Query: 393  PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
            P  ++E +       +DI   GGL      ++++I +          LG+ P KGVLL+G
Sbjct: 170  PVKEVEKRMTTGVTYEDI---GGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYG 226

Query: 452  PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
            PPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L EVF  A ++AP+++FIDE
Sbjct: 227  PPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREVFKEAEENAPSIIFIDE 286

Query: 512  LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
            +DAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNRPD+++PALRRPGR DR
Sbjct: 287  IDAIAPKRSEVTGEVEKRVVAQLLALMDGLKGRGKVIVIGATNRPDALDPALRRPGRFDR 346

Query: 572  EIEI---DMSFLFSLLKNSPAAVP-SPAQRLEILHALLSGME-----HSLLDSEVEYLSM 622
            EIE+   D      +L+     +P  P  R E +  +L G++       ++D  ++ +  
Sbjct: 347  EIEVGVPDKQGRKEILQIHTRGMPIEPDFRKEDVLKILEGLKKEGKFRDVIDKAIDRVMK 406

Query: 623  ATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRN 682
             +   +   L  L  E        Y +++T                  D +L++      
Sbjct: 407  VSEDDIPKVLKELNGEL-------YEEVRTR---------------LVDLLLEE------ 438

Query: 683  ITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCA 742
            + E +   + +     +          L   G +   A+     V D             
Sbjct: 439  LAEVTHGFVGADLAALAREAAMAALRRLIKEGKIDFEAETIPREVLDE------------ 486

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++EVP V W+D+GG  EVK +L EAVEWP K+ EAF+
Sbjct: 487  LKVTRKDFYEALKMVEPSALREVLIEVPNVHWDDIGGLEEVKQELREAVEWPLKYPEAFR 546

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G  PP G+L++GPPG  KTL+A+AVA+E+  NF+AV+GPE+ SKWVGESEK +R +F 
Sbjct: 547  AYGITPPKGVLLYGPPGTGKTLLAKAVATESEANFIAVRGPEVLSKWVGESEKNIREIFR 606

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VIAATNR
Sbjct: 607  KARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRLINQLLTEMDGIQENTGVVVIAATNR 664

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV++RELA  +EG TGA
Sbjct: 665  PDILDPALLRPGRFDRLILVPAPDEEARFEIFKVHTRSMPLADDVDLRELARRTEGYTGA 724

Query: 983  DISLICREAAISAIEENLD---------------ASRITMQHLKTAIRHVQPS----EIH 1023
            DI+ +CREAA+ A+ + L+                +++TM+  + A++ + PS     + 
Sbjct: 725  DIAAVCREAAMIAMRKALEKGIIKPGMKADEIKQKAKVTMKDFEEALKKIGPSVSKETME 784

Query: 1024 SYKELSAKFQR 1034
             Y+++  +F++
Sbjct: 785  YYRKIQEQFKQ 795


>gi|57640604|ref|YP_183082.1| cell division protein CDC48 [Thermococcus kodakarensis KOD1]
 gi|6513847|dbj|BAA87866.1| Pk-cdcA [Thermococcus kodakaraensis]
 gi|57158928|dbj|BAD84858.1| CDC48/VCP homolog, AAA superfamily [Thermococcus kodakarensis KOD1]
          Length = 835

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/672 (39%), Positives = 389/672 (57%), Gaps = 101/672 (15%)

Query: 391  TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
             LP A +++ +++     +DI   GGLS     +++++ +          LG+ P KGVL
Sbjct: 191  VLPQAVEVKEESIPEVTYEDI---GGLSDAIQKIREMVELPLKHPELFERLGIEPPKGVL 247

Query: 449  LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
            L+GPPGTGKT LA+  A+++  +   +NGPE++S+ YGESE+ L E+F  A ++AP+++F
Sbjct: 248  LYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKFYGESEERLREIFKEAEENAPSIIF 307

Query: 509  IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
            IDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+++PALRRPGR
Sbjct: 308  IDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDALDPALRRPGR 367

Query: 569  LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 628
             DREIE+               VP    R EIL     GM       E +Y         
Sbjct: 368  FDREIEV--------------GVPDKQGRKEILQIHTRGM-----PLEPDY--------- 399

Query: 629  GADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSR 688
                     EA L  LR           +   G  F+ E   D ++ + + ++N +E  +
Sbjct: 400  -------DKEAVLRVLRE----------IREKGN-FDAE-RVDKIIAEVENAKNESEV-K 439

Query: 689  DCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM-----------FMS 737
            + L   +   S++   L+   L       E+A+  H  V      +            + 
Sbjct: 440  EALKKDAEIYSEVRNRLIDKML------DELAEVTHGFVGADLAALAREAAMVVLRRLIK 493

Query: 738  EKGCA-------------LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVK 784
            E   +             L++   DF +A   V PSA+REV++EVP V+WED+GG  +VK
Sbjct: 494  EGKISPEQERIPPEVLQELRVRRDDFYEALKMVEPSALREVLIEVPNVRWEDIGGLEDVK 553

Query: 785  TQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPE 844
             +L EAVEWP K+ +AF+R+G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A++GPE
Sbjct: 554  QELREAVEWPLKYPKAFERLGIEPPKGILLYGPPGTGKTLLAKAVANESQANFIAIRGPE 613

Query: 845  LFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVE 904
            + SKWVGE+EK +R +F KAR  AP+++F DEID +A  RG E D   V+DR+++QLL E
Sbjct: 614  VLSKWVGETEKRIREIFRKARQAAPTVVFIDEIDAIAPARGSEGD--RVTDRLINQLLTE 671

Query: 905  LDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS 964
            +DG+ +   V VI ATNRPD IDPALLRPGRFDRL+ V  P+E  R EIF++H R++P +
Sbjct: 672  MDGIQENSGVVVIGATNRPDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRRVPLA 731

Query: 965  SDVNIRELACLSEGCTGADISLICREAAISAIEE----------------NLDASRITMQ 1008
             DV++RELA  +EG TGADI+ + REAA+ A+                   L+  +++ +
Sbjct: 732  GDVDLRELAKKTEGYTGADIAALVREAALIAMRRIMRELPREVVESESEEFLERLKVSKK 791

Query: 1009 HLKTAIRHVQPS 1020
              + A++ V+PS
Sbjct: 792  DFEMAMKKVKPS 803


>gi|73669810|ref|YP_305825.1| cell division control protein 48 AAA family protein [Methanosarcina
            barkeri str. Fusaro]
 gi|72396972|gb|AAZ71245.1| cell division control protein 48 AAA family protein [Methanosarcina
            barkeri str. Fusaro]
          Length = 775

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/634 (40%), Positives = 366/634 (57%), Gaps = 73/634 (11%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          L + P KGV+L+GPPGTGKT +A+  A++SG +
Sbjct: 200  IGGLGAEIMRVREMIELPMKHPELFGHLNIEPPKGVILYGPPGTGKTLIAKAVANESGAS 259

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
               + GPE+V + YGESE+ L ++F+ A+Q AP+V+FIDE+D+IAP R++   E+ +R+V
Sbjct: 260  FHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEIDSIAPKRENVTGEVERRVV 319

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL L+DG+     V+VI ATNR D+I+PALRRPGR DREI I               V
Sbjct: 320  AQLLTLLDGMVERGQVVVIGATNRVDAIDPALRRPGRFDREIHI--------------GV 365

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL     GM     D E E            ++  +  EA    L R  K +
Sbjct: 366  PDTKDRYEILQIHTRGMPIER-DEETE------------EIGKVETEADEAALERERKEK 412

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                +++       F G        +D    + E++  CL    P   DL   L   ++P
Sbjct: 413  ADKYLMYLAERTQGFVG--------ADLLALVQEAAMRCLRENLP---DL--DLEKEAIP 459

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
                                      E+   + +   +FE A M+  PSA+RE+ +E+P 
Sbjct: 460  -------------------------PERLEKIVVTKRNFEDALMEAEPSALREIYVEMPT 494

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V W DVGG  E K  + EAVEWP K+ E F  +G + P GIL++GPPG  KTL+A+AVA 
Sbjct: 495  VSWNDVGGLDEAKQSITEAVEWPIKNPEKFSHMGIKAPRGILLYGPPGTGKTLIAKAVAK 554

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  NF++VKGPE+FSKW+GESEKA+R  F KAR  AP +IFFDEID +A++ G ES   
Sbjct: 555  ESNANFISVKGPEIFSKWLGESEKAIRETFRKARQVAPCVIFFDEIDSIASMPGMESTDS 614

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
              S+RV++QLL E+DGL    +V VIAATNRP+ +DPA+LRPGRFDRL+Y+G P+   R 
Sbjct: 615  HTSERVLNQLLTEMDGLESLRDVVVIAATNRPNLLDPAILRPGRFDRLVYIGSPDRKGRL 674

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            +IFRIH +  P + +VN+  LA  +EG  GADI  +CREA + A+ EN D   + M+H +
Sbjct: 675  KIFRIHTKDTPLAENVNLETLADETEGYVGADIESVCREAVMIALRENFDTEYVEMRHFR 734

Query: 1012 TAIRHVQPSEIHS----YKELSAKF---QRLVHS 1038
             A++ V+P+   +    Y+++ A+F   QRL  +
Sbjct: 735  EALKKVKPTITENIAQFYEKIEAQFKGGQRLTET 768



 Score =  198 bits (503), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/254 (41%), Positives = 148/254 (58%), Gaps = 29/254 (11%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +ED+GG      ++ E +E P KH E F  +   PP G++++GPPG  KTL+A+AVA+E+
Sbjct: 197  YEDIGGLGAEIMRVREMIELPMKHPELFGHLNIEPPKGVILYGPPGTGKTLIAKAVANES 256

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            G +F  + GPE+  K+ GESE+ +R +F +A  +APS+IF DEID +A  R  E+    V
Sbjct: 257  GASFHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEIDSIAPKR--ENVTGEV 314

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++QLL  LDG+ +R  V VI ATNR D IDPAL RPGRFDR +++G P+  DR EI
Sbjct: 315  ERRVVAQLLTLLDGMVERGQVVVIGATNRVDAIDPALRRPGRFDREIHIGVPDTKDRYEI 374

Query: 954  FRIHLRKIPCSSDVNIRE---------------------------LACLSEGCTGADISL 986
             +IH R +P   D    E                           LA  ++G  GAD+  
Sbjct: 375  LQIHTRGMPIERDEETEEIGKVETEADEAALERERKEKADKYLMYLAERTQGFVGADLLA 434

Query: 987  ICREAAISAIEENL 1000
            + +EAA+  + ENL
Sbjct: 435  LVQEAAMRCLRENL 448


>gi|71018963|ref|XP_759712.1| hypothetical protein UM03565.1 [Ustilago maydis 521]
 gi|46099223|gb|EAK84456.1| hypothetical protein UM03565.1 [Ustilago maydis 521]
          Length = 861

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 270/680 (39%), Positives = 382/680 (56%), Gaps = 138/680 (20%)

Query: 400  QNVQATVEQD-ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGK 457
            Q+   T+++D  +KLGGL ++ A +K +I +           GL+P KGVLL+GPPGTGK
Sbjct: 239  QSANETLKEDPYAKLGGLDRQIAEIKTLIEMPLMSPEIFVQYGLKPPKGVLLYGPPGTGK 298

Query: 458  TSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAP 517
            TSLAR  A  +G +  T+NGPE+ S  +GE+E  L  +F  A + +P ++ IDE+DA+AP
Sbjct: 299  TSLARAVATATGSSYITINGPELSSAFHGETESKLRSIFKEARRKSPCIIIIDEIDALAP 358

Query: 518  ARK---------DGGEELSQRMVATLLNLMDGVCRTDG---------------------- 546
             R          DG  E+ +R+VA LL L+DG+   D                       
Sbjct: 359  RRDGGTGEGANADGAGEVERRVVAQLLTLLDGMEEADDDEDSLEQAEADFSNVHVEDGTT 418

Query: 547  ------------VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP 594
                        V+V+AATNRP++I+PALRRPGRLDREIEI               +PS 
Sbjct: 419  TEKTISTKAPTRVVVLAATNRPNAIDPALRRPGRLDREIEI--------------GIPSA 464

Query: 595  AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKIQTS 653
              R EI+ AL+  + H+L   +++ L+  THG+VGADL+AL  EA +  +RR +++ Q+ 
Sbjct: 465  VARGEIIRALIRPVPHNLSSKQIDDLAGRTHGYVGADLSALVREAGMRAVRRTFARRQSG 524

Query: 654  SDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLR 713
             D + +       E                T SS D +D           S+L +     
Sbjct: 525  KDRIEARLASMSIE----------------TASSGDSVD-----------SMLDNV---- 553

Query: 714  GTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVK 773
                  A++ H                 AL L           VRPSAMRE+ LE PKV 
Sbjct: 554  -----TAEDLH----------------AALSL-----------VRPSAMREIFLEPPKVY 581

Query: 774  WEDVGGQ-------------REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGC 820
            W D+ G              + V+ Q+ E VEWP KH   F R+G  PP G+L++GPPGC
Sbjct: 582  WSDIAGSLTPSAGGSGALSTKSVQAQVQELVEWPIKHASTFARLGVSPPRGVLLYGPPGC 641

Query: 821  SKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGL 880
            SKTL+ARA+A+E+GLNFLAVKGPEL+SK+VGESE+AVR  F KARA APSIIFFDEID L
Sbjct: 642  SKTLIARALATESGLNFLAVKGPELYSKYVGESERAVRDTFKKARAAAPSIIFFDEIDAL 701

Query: 881  -AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
             ++  G  S G +++ R+++ LL E+DG+    +V VI ATNRP  +DPALLRPGR DRL
Sbjct: 702  SSSRDGDSSSGDALNSRIIATLLNEMDGIEAMSDVIVIGATNRPQALDPALLRPGRLDRL 761

Query: 940  LYVGPPNETDREEIFRIHLRKIPCSS-DVNIRELACLSEGCTGADISLICREAAISAIEE 998
            +YVGPP+   R++I R  + K+  S+  ++  +LA +++GC+GA++  IC+EA   A++E
Sbjct: 762  VYVGPPDHAARQQILRTRMAKMAVSAHSIDFEKLAQMTDGCSGAEVVSICQEAGFLAMDE 821

Query: 999  NLDASRITMQHLKTAIRHVQ 1018
            +L+   I  +H ++A   V+
Sbjct: 822  DLNCQTIEQRHFESAAASVK 841



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 162/325 (49%), Gaps = 46/325 (14%)

Query: 719  IADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPS-AMREVILEVPKVKWEDV 777
            +  + H+  +DSS  + M  +   + +   D    +MK   + +  E + E P  K   +
Sbjct: 197  VTTSAHSATTDSSTQVCMMSRTTEVSISSFDTYSNQMKESAAQSANETLKEDPYAK---L 253

Query: 778  GGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNF 837
            GG      ++   +E P    E F + G +PP G+L++GPPG  KT +ARAVA+  G ++
Sbjct: 254  GGLDRQIAEIKTLIEMPLMSPEIFVQYGLKPPKGVLLYGPPGTGKTSLARAVATATGSSY 313

Query: 838  LAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR------GKESDGV 891
            + + GPEL S + GE+E  +RS+F +AR  +P II  DEID LA  R      G  +DG 
Sbjct: 314  ITINGPELSSAFHGETESKLRSIFKEARRKSPCIIIIDEIDALAPRRDGGTGEGANADGA 373

Query: 892  S-VSDRVMSQLLVELDGLHQR----------------------------------VNVTV 916
              V  RV++QLL  LDG+ +                                     V V
Sbjct: 374  GEVERRVVAQLLTLLDGMEEADDDEDSLEQAEADFSNVHVEDGTTTEKTISTKAPTRVVV 433

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACL 975
            +AATNRP+ IDPAL RPGR DR + +G P+   R EI R  +R +P + S   I +LA  
Sbjct: 434  LAATNRPNAIDPALRRPGRLDREIEIGIPSAVARGEIIRALIRPVPHNLSSKQIDDLAGR 493

Query: 976  SEGCTGADISLICREAAISAIEENL 1000
            + G  GAD+S + REA + A+    
Sbjct: 494  THGYVGADLSALVREAGMRAVRRTF 518


>gi|341583093|ref|YP_004763585.1| hypothetical protein GQS_10075 [Thermococcus sp. 4557]
 gi|340810751|gb|AEK73908.1| hypothetical protein GQS_10075 [Thermococcus sp. 4557]
          Length = 837

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/632 (40%), Positives = 371/632 (58%), Gaps = 85/632 (13%)

Query: 391 TLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLL 449
            LP A +E +  +A  E     +GGLS     +++++ +          LG+ P KGVLL
Sbjct: 193 VLPQA-VEVRE-EAIPEVTYEDIGGLSDAIQKIREMVELPLKHPELFERLGIEPPKGVLL 250

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
           +GPPGTGKT LA+  A+++  +   +NGPEV+S+ YGESE+ L E+F  A ++AP+++FI
Sbjct: 251 YGPPGTGKTLLAKAVANEANAHFIAINGPEVMSKFYGESEERLREIFKEAEENAPSIIFI 310

Query: 510 DELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
           DE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+++PALRRPGR 
Sbjct: 311 DEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKGRGKVIVIAATNRPDALDPALRRPGRF 370

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 629
           DREIE+               VP    R EIL     GM       E +Y          
Sbjct: 371 DREIEV--------------GVPDKKGRKEILQIHTRGM-----PLEPDY---------- 401

Query: 630 ADLAALCNEAALVCLRRYSKIQT-SSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSR 688
                   E  L  L+   K +    DVL               +++  + +R+  +  +
Sbjct: 402 ------DRETVLRVLKELLKKKAFDEDVLKK-------------LMERVEKARS-DDEVK 441

Query: 689 DCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM-----------FMS 737
           + L SAS    ++ T L+   L       +IA+  H  V      +            ++
Sbjct: 442 EILKSASEVYPEVRTRLIDRML------EKIAEKTHGFVGADLAALAREAAMVVLRRLIN 495

Query: 738 EKGCA-------------LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVK 784
           E   +             L++   DF +A   V PSA+REV++E+P V+W+D+GG  EVK
Sbjct: 496 EGKISPEHEKIPPEVLQELRVRKADFYEALKMVDPSALREVLIEMPNVRWKDIGGLEEVK 555

Query: 785 TQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPE 844
            +L EAVEWP K+ +AF+R+G  PP G+L++GPPG  KTL+A+AVA+E+  NF+ ++GPE
Sbjct: 556 QELKEAVEWPMKYPKAFQRLGIEPPRGVLLYGPPGTGKTLLAKAVATESEANFIGIRGPE 615

Query: 845 LFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVE 904
           + SKWVGESEK VR +F KAR  AP++IF DEID +A  RG E D   V+DR+++QLL E
Sbjct: 616 VLSKWVGESEKRVREIFRKARQAAPTVIFIDEIDAIAPARGMEGD--RVTDRLINQLLTE 673

Query: 905 LDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS 964
           +DG+ +   V VIAATNRPD +DPALLRPGRFDRL+ V  P+E  R EI R+H +++P +
Sbjct: 674 MDGIERNSGVVVIAATNRPDILDPALLRPGRFDRLILVPAPDEKARLEILRVHTKRVPLA 733

Query: 965 SDVNIRELACLSEGCTGADISLICREAAISAI 996
            DVN++ELA  +EG +GADI  + REAA+ A+
Sbjct: 734 GDVNLKELAKKTEGYSGADIEALVREAALLAM 765



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 143/242 (59%), Gaps = 30/242 (12%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    LK+ +            LG+ P +GVLL+GPPGTGKT LA+  A +S  N
Sbjct: 548 IGGLEEVKQELKEAVEWPMKYPKAFQRLGIEPPRGVLLYGPPGTGKTLLAKAVATESEAN 607

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              + GPEV+S+  GESE+ + E+F  A Q+AP V+FIDE+DAIAPAR   G+ ++ R++
Sbjct: 608 FIGIRGPEVLSKWVGESEKRVREIFRKARQAAPTVIFIDEIDAIAPARGMEGDRVTDRLI 667

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
             LL  MDG+ R  GV+VIAATNRPD ++PAL RPGR DR I                 V
Sbjct: 668 NQLLTEMDGIERNSGVVVIAATNRPDILDPALLRPGRFDRLI----------------LV 711

Query: 592 PSPAQ--RLEILHAL-----LSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           P+P +  RLEIL        L+G      D  ++ L+  T G+ GAD+ AL  EAAL+ +
Sbjct: 712 PAPDEKARLEILRVHTKRVPLAG------DVNLKELAKKTEGYSGADIEALVREAALLAM 765

Query: 645 RR 646
           RR
Sbjct: 766 RR 767


>gi|145343484|ref|XP_001416352.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576577|gb|ABO94645.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 567

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 280/641 (43%), Positives = 381/641 (59%), Gaps = 92/641 (14%)

Query: 408  QDIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
            QD+S   LGG++   A L++++ +        +  G++P +GVLL+GPPG+GKT LAR  
Sbjct: 3    QDVSFDSLGGVADHEAALRELVTLPLESPEVFTRCGVKPPRGVLLYGPPGSGKTRLARAA 62

Query: 465  AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD--G 522
            A  S   LF VNGPE+VS + GESE+AL  VF +A ++AP+VV +DELDAIAPAR    G
Sbjct: 63   AQASNAKLFVVNGPELVSAHMGESEEALRGVFLAAVKAAPSVVLLDELDAIAPARNQSSG 122

Query: 523  GEE-LSQRMVATLLNLMDG----VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
            G++ +S R+VAT+L + DG    V   D V+VIA TNRPD+IE +LRRPGR DRE+E+  
Sbjct: 123  GDDMMSSRIVATMLAIFDGTSSNVPELDRVVVIATTNRPDAIERSLRRPGRFDRELEV-- 180

Query: 578  SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                         VP+P+ RLEIL   L G+ H L +  +  L+   HGFVGAD+A+LC 
Sbjct: 181  ------------GVPTPSDRLEILQTHLRGLNHDLTEEYIVDLARRAHGFVGADIASLCQ 228

Query: 638  EAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPC 697
             AA+  L R   I+ +S    S+G   + +G +   + D D S   +   R  +D     
Sbjct: 229  NAAMRALTRV--IEKTSK--RSSGVSDDVDGVA-RAIGDIDIS---SRDERVIMDDFEHA 280

Query: 698  TSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKV 757
               +  S L           E+A    N   D  GG+              D  K R+K 
Sbjct: 281  RVKVRPSAL----------REVAIEVPNVAWDDVGGL--------------DEVKDRLK- 315

Query: 758  RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
                                           EAVEW +KH +A KR+G  PP GIL++GP
Sbjct: 316  -------------------------------EAVEWAEKHPDAMKRVGASPPKGILLYGP 344

Query: 818  PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
            PGCSKT++ARAVAS +G NF+++KG ELFSKWVG+SEKAVR++F++AR +APS+IF DE+
Sbjct: 345  PGCSKTMLARAVASASGRNFISIKGSELFSKWVGDSEKAVRAVFSRARTSAPSVIFIDEV 404

Query: 878  DGLAAIRGKESDGV--SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGR 935
            DGLA  RG    G   SV DRV++QLL E+DGL    NVTV+AATNRPD +D ALLRPGR
Sbjct: 405  DGLAGTRGGGEQGGAPSVQDRVITQLLGEMDGLSPTTNVTVVAATNRPDLVDGALLRPGR 464

Query: 936  FDRLLYVGPPNET-DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            FDRLLYV PP  + DR  I R+  +  P + DV++   A  + G TGAD+S I REAA++
Sbjct: 465  FDRLLYVPPPQSSEDRMAILRVQFKNTPLADDVDLSLAAMSTHGYTGADLSAISREAALA 524

Query: 995  AIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRL 1035
            A+EE++DA R+  +H+ TA+  V+PS    ++EL   +Q+ 
Sbjct: 525  ALEESIDADRVFARHVATAMTRVRPSP-PPHRELLEMYQKF 564



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 136/271 (50%), Gaps = 41/271 (15%)

Query: 387 LREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTK 445
           +R   L    IE  NV          +GGL +    LK+ +  +      +  +G  P K
Sbjct: 284 VRPSALREVAIEVPNVA------WDDVGGLDEVKDRLKEAVEWAEKHPDAMKRVGASPPK 337

Query: 446 GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPA 505
           G+LL+GPPG  KT LAR  A  SG N  ++ G E+ S+  G+SE+A+  VF  A  SAP+
Sbjct: 338 GILLYGPPGCSKTMLARAVASASGRNFISIKGSELFSKWVGDSEKAVRAVFSRARTSAPS 397

Query: 506 VVFIDELDAIA----PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           V+FIDE+D +A       + G   +  R++  LL  MDG+  T  V V+AATNRPD ++ 
Sbjct: 398 VIFIDEVDGLAGTRGGGEQGGAPSVQDRVITQLLGEMDGLSPTTNVTVVAATNRPDLVDG 457

Query: 562 ALRRPGRLDREI--------EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           AL RPGR DR +        E  M+ L    KN+P A                       
Sbjct: 458 ALLRPGRFDRLLYVPPPQSSEDRMAILRVQFKNTPLAD---------------------- 495

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           D ++   +M+THG+ GADL+A+  EAAL  L
Sbjct: 496 DVDLSLAAMSTHGYTGADLSAISREAALAAL 526


>gi|223478121|ref|YP_002582772.1| Cell division protein FtsH [Thermococcus sp. AM4]
 gi|214033347|gb|EEB74174.1| Cell division protein FtsH [Thermococcus sp. AM4]
          Length = 838

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/674 (38%), Positives = 379/674 (56%), Gaps = 104/674 (15%)

Query: 391  TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
             LP A ++  +++     +DI   GGLS     +++++ +          LG+ P KGVL
Sbjct: 193  VLPQAVEVREESIPEVTYEDI---GGLSDAIQKIREMVELPLKHPELFERLGIEPPKGVL 249

Query: 449  LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
            L+GPPGTGKT LA+  A+++  +   +NGPE++S+ YGESE+ L E+F  A ++AP+++F
Sbjct: 250  LYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKFYGESEERLREIFKEAEENAPSIIF 309

Query: 509  IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
            IDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+I+PALRRPGR
Sbjct: 310  IDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKGRGKVIVIAATNRPDAIDPALRRPGR 369

Query: 569  LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLLDSEVEYLSMATHG 626
             DREIE+               VP    R EIL     GM  E S    EV         
Sbjct: 370  FDREIEV--------------GVPDKQGRKEILQIHTRGMPLEPSFDKEEV--------- 406

Query: 627  FVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITES 686
                 LA L                   ++    G   E  G    +++ +   R I E 
Sbjct: 407  -----LAVL------------------EELARRGGKFAEEVGKLKPLVEAAQSGREIKE- 442

Query: 687  SRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM-----------F 735
                L  +    S++   L+   L        IAD  H  V      +            
Sbjct: 443  ---ILKGSGELYSEVKAKLIDRML------DRIADRTHGFVGADLAALAREAAMVVLRRL 493

Query: 736  MSEKGCA-------------LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQRE 782
            + E   +             L++   DF +A   V PSA+REV++EVP V+W+D+GG  +
Sbjct: 494  IQEGKVSPEQERIPPEVLQELRVREEDFYEALKMVEPSALREVLIEVPNVRWDDIGGLED 553

Query: 783  VKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKG 842
            VK +L EAVEWP K+ +AF+R+G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A++G
Sbjct: 554  VKQELREAVEWPLKYPKAFERLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIRG 613

Query: 843  PELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLL 902
            PE+ SKWVGE+EK +R +F KAR  AP+++F DEID +A  RG    G  + D +++QLL
Sbjct: 614  PEVLSKWVGETEKRIREIFRKARQAAPTVVFIDEIDAIAPARGSYEGGRHL-DTLINQLL 672

Query: 903  VELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP 962
             E+DG+ +   V VI ATNRPD IDPALLRPGRFDRL+ V  P+E  R EIF++H R++P
Sbjct: 673  TEMDGIQENSGVVVIGATNRPDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRRVP 732

Query: 963  CSSDVNIRELACLSEGCTGADISLICREAAISAI----------------EENLDASRIT 1006
             + DVN+ ELA  +EG +GADI  + REAA+ A+                EE L++ +++
Sbjct: 733  LAEDVNLEELAKKTEGYSGADIEALVREAALIALRRAVSRLPRDVVEKQSEEFLESLKVS 792

Query: 1007 MQHLKTAIRHVQPS 1020
             +  + A++ V+PS
Sbjct: 793  RKDFEMALKKVRPS 806


>gi|390961747|ref|YP_006425581.1| cell division protein containing CDC48 domain 2 [Thermococcus sp.
           CL1]
 gi|390520055|gb|AFL95787.1| cell division protein containing CDC48 domain 2 [Thermococcus sp.
           CL1]
          Length = 836

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/631 (40%), Positives = 364/631 (57%), Gaps = 83/631 (13%)

Query: 391 TLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLL 449
            LP A +E +  +A  E     +GGLS     +++++ +          LG+ P KGVLL
Sbjct: 193 VLPQA-VEVRE-EAIPEVTYEDIGGLSDAIQKIREMVELPLKHPELFERLGIEPPKGVLL 250

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
           +GPPGTGKT LA+  A+++  +   +NGPE++S+ YGESE+ L E+F  A ++AP+++FI
Sbjct: 251 YGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKFYGESEERLREIFKEAEENAPSIIFI 310

Query: 510 DELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
           DE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+++PALRRPGR 
Sbjct: 311 DEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKGRGKVIVIAATNRPDALDPALRRPGRF 370

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 629
           DREIE+               VP    R EIL      M       E +Y          
Sbjct: 371 DREIEV--------------GVPDKQGRKEILQIHTRSM-----PLEPDY---------- 401

Query: 630 ADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 689
                   E  L  LR  ++ +              F+  +   L +        E  ++
Sbjct: 402 ------DRETVLRVLRELARRKA-------------FDEKALRKLTERVERARSEEEIKE 442

Query: 690 CLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM-----------FMSE 738
            L S S    ++   L+   L       EIAD  H  V      +            ++E
Sbjct: 443 ILKSESEIYPEVRARLIDRML------EEIADKTHGFVGADLAALAREAAMVVLRRLINE 496

Query: 739 KGCA-------------LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKT 785
              +             L++   DF +A   V PSA+REV++E+P V+WED+GG  EVK 
Sbjct: 497 GKISPEQERIPPEVLQELRVRKADFYEALKMVDPSALREVLIEMPNVRWEDIGGLDEVKQ 556

Query: 786 QLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPEL 845
           +L EAVEWP K+ +AF+R+G  PP G+L++GPPG  KTL+A+AVA+E+  NF+ ++GPE+
Sbjct: 557 ELKEAVEWPLKYPKAFQRLGIEPPRGVLLYGPPGTGKTLLAKAVATESEANFIGIRGPEV 616

Query: 846 FSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVEL 905
            SKWVGESEK +R +F KAR  AP++IF DEID +A  RG E D   V+DR+++QLL E+
Sbjct: 617 LSKWVGESEKRIREIFRKARQAAPTVIFIDEIDAIAPARGMEGD--RVTDRLINQLLTEM 674

Query: 906 DGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS 965
           DG+ +   V VIAATNRPD +DPALLRPGRFDRL+ V  P+E  R EI R+H R++P + 
Sbjct: 675 DGIERNSGVVVIAATNRPDILDPALLRPGRFDRLILVPAPDEKARLEILRVHTRRVPLAK 734

Query: 966 DVNIRELACLSEGCTGADISLICREAAISAI 996
           DVN+RELA  +EG +GAD+  + REAA+ A+
Sbjct: 735 DVNLRELAKKTEGYSGADLEALVREAALLAM 765



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 184/307 (59%), Gaps = 23/307 (7%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P+V +ED+GG  +   ++ E VE P KH E F+R+G  PP G+L++GPPG  KTL+A+A
Sbjct: 205  IPEVTYEDIGGLSDAIQKIREMVELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLLAKA 264

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+EA  +F+A+ GPE+ SK+ GESE+ +R +F +A  NAPSIIF DEID +A  R +E 
Sbjct: 265  VANEANAHFIAINGPEIMSKFYGESEERLREIFKEAEENAPSIIFIDEIDAIAPKR-EEV 323

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV+SQLL  +DGL  R  V VIAATNRPD +DPAL RPGRFDR + VG P++ 
Sbjct: 324  VG-EVEKRVVSQLLTLMDGLKGRGKVIVIAATNRPDALDPALRRPGRFDREIEVGVPDKQ 382

Query: 949  DREEIFRIHLRKIPCSSDVNIRE--LACLSEGCTGADISLICREAAISAIEENLDASRIT 1006
             R+EI +IH R +P   D + RE  L  L E            E A+  + E ++ +R  
Sbjct: 383  GRKEILQIHTRSMPLEPDYD-RETVLRVLRELARRKAFD----EKALRKLTERVERARSE 437

Query: 1007 MQHLKTAIRHVQPSEIHSYKELSAKF-QRLVHSNAEADESGYQLRPSKSIGSNMWTLIKS 1065
             +     I+ +  SE   Y E+ A+   R++   A+    G+       +G+++  L + 
Sbjct: 438  EE-----IKEILKSESEIYPEVRARLIDRMLEEIADKT-HGF-------VGADLAALARE 484

Query: 1066 ISLFLCR 1072
             ++ + R
Sbjct: 485  AAMVVLR 491



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/253 (43%), Positives = 148/253 (58%), Gaps = 26/253 (10%)

Query: 397 IEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGT 455
           IE  NV+    +DI   GGL +    LK+ +            LG+ P +GVLL+GPPGT
Sbjct: 538 IEMPNVRW---EDI---GGLDEVKQELKEAVEWPLKYPKAFQRLGIEPPRGVLLYGPPGT 591

Query: 456 GKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAI 515
           GKT LA+  A +S  N   + GPEV+S+  GESE+ + E+F  A Q+AP V+FIDE+DAI
Sbjct: 592 GKTLLAKAVATESEANFIGIRGPEVLSKWVGESEKRIREIFRKARQAAPTVIFIDEIDAI 651

Query: 516 APARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI 575
           APAR   G+ ++ R++  LL  MDG+ R  GV+VIAATNRPD ++PAL RPGR DR I  
Sbjct: 652 APARGMEGDRVTDRLINQLLTEMDGIERNSGVVVIAATNRPDILDPALLRPGRFDRLI-- 709

Query: 576 DMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
                          VP+P +  RLEIL      +  +  D  +  L+  T G+ GADL 
Sbjct: 710 --------------LVPAPDEKARLEILRVHTRRVPLA-KDVNLRELAKKTEGYSGADLE 754

Query: 634 ALCNEAALVCLRR 646
           AL  EAAL+ +RR
Sbjct: 755 ALVREAALLAMRR 767


>gi|218884381|ref|YP_002428763.1| AAA family ATPase [Desulfurococcus kamchatkensis 1221n]
 gi|218765997|gb|ACL11396.1| AAA family ATPase, CDC48 subfamily [Desulfurococcus kamchatkensis
            1221n]
          Length = 729

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/615 (42%), Positives = 357/615 (58%), Gaps = 99/615 (16%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL      ++++I I    +     LG+ P KG+LL+GPPGTGKT LA+  A++    
Sbjct: 176  IGGLGNIIDKIREMIEIPLKYRKVFRKLGIEPPKGILLYGPPGTGKTLLAKALANEVNAY 235

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSA---SQSAPAVVFIDELDAIAPARKDGGEELSQ 528
              T+NGPE++S+ YGESEQ L E+F  A   S+  PA++FIDE+DAIAP R +   E+ +
Sbjct: 236  FVTINGPEIMSKYYGESEQRLREIFKLAKKKSRKNPAIIFIDEIDAIAPKRDEVVGEVER 295

Query: 529  RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            R+VA LL LMDG+     V+VIAATNRP++++PALRRPGR DREIEI M           
Sbjct: 296  RVVAQLLALMDGLESRGNVIVIAATNRPNALDPALRRPGRFDREIEIPM----------- 344

Query: 589  AAVPSPAQRLEILHALLSGM-EHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
               P    RLEIL      + E  +L  +V+   +A  THG+ GADL      AALV   
Sbjct: 345  ---PDKKGRLEILQIHTRRLRELGILSEDVDLNKLAEITHGYTGADL------AALV--- 392

Query: 646  RYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
                      VLH+                            R  +    P    LP +L
Sbjct: 393  -------KEAVLHAI---------------------------RRQIPLDQPSEWPLPDAL 418

Query: 706  LSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREV 765
            L+S                                  +K+   DF  A   + PS +RE+
Sbjct: 419  LTS----------------------------------IKITFEDFLFAYRSIVPSGLREI 444

Query: 766  ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
             +EVP V+W D+GG  EVK  L E VE P ++ E ++R G +PP G+L++GPPGC KTL+
Sbjct: 445  HVEVPDVRWSDIGGLEEVKRSLRENVELPLRYPEIYERYGIKPPRGVLLYGPPGCGKTLL 504

Query: 826  ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
            A+AVA+E+G NF+AVKGPE+ SKWVGESE+A+R +F KAR  AP +IFFDEID +A++RG
Sbjct: 505  AKAVATESGANFIAVKGPEIMSKWVGESERAIREIFRKARLYAPVVIFFDEIDAIASLRG 564

Query: 886  KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
             E+D    S+RV++QL+ E+DG+ +  NV V+AATNRPD +DPALLRPGRFD+L+YV PP
Sbjct: 565  IETDS-GASERVVTQLITEMDGIQKLENVVVLAATNRPDLLDPALLRPGRFDKLIYVPPP 623

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI 1005
            +   R EI RIH R IP S DVN+ ELA ++EG +GAD+  + RE  + A+  +     +
Sbjct: 624  DFNARLEILRIHTRSIPLSRDVNLVELARITEGYSGADLEAVVRETVMLALRGSPFIEMV 683

Query: 1006 TMQHLKTAIRHVQPS 1020
              +H   A+  V+PS
Sbjct: 684  ERKHFMNALELVKPS 698



 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 174/286 (60%), Gaps = 29/286 (10%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E + E P+V +ED+GG   +  ++ E +E P K+++ F+++G  PP GIL++GPPG  KT
Sbjct: 163  EPVGEFPRVTFEDIGGLGNIIDKIREMIEIPLKYRKVFRKLGIEPPKGILLYGPPGTGKT 222

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF----AKARANAPSIIFFDEIDG 879
            L+A+A+A+E    F+ + GPE+ SK+ GESE+ +R +F     K+R N P+IIF DEID 
Sbjct: 223  LLAKALANEVNAYFVTINGPEIMSKYYGESEQRLREIFKLAKKKSRKN-PAIIFIDEIDA 281

Query: 880  LAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            +A  R  +     V  RV++QLL  +DGL  R NV VIAATNRP+ +DPAL RPGRFDR 
Sbjct: 282  IAPKR--DEVVGEVERRVVAQLLALMDGLESRGNVIVIAATNRPNALDPALRRPGRFDRE 339

Query: 940  LYVGPPNETDREEIFRIHLRKIP----CSSDVNIRELACLSEGCTGADISLICREAAISA 995
            + +  P++  R EI +IH R++      S DV++ +LA ++ G TGAD++ + +EA + A
Sbjct: 340  IEIPMPDKKGRLEILQIHTRRLRELGILSEDVDLNKLAEITHGYTGADLAALVKEAVLHA 399

Query: 996  IEEN---------------LDASRITMQHLKTAIRHVQPS---EIH 1023
            I                  L + +IT +    A R + PS   EIH
Sbjct: 400  IRRQIPLDQPSEWPLPDALLTSIKITFEDFLFAYRSIVPSGLREIH 445



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 136/241 (56%), Gaps = 25/241 (10%)

Query: 411 SKLGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL + + ++ +++ +           G++P +GVLL+GPPG GKT LA+  A +SG
Sbjct: 454 SDIGGLEEVKRSLRENVELPLRYPEIYERYGIKPPRGVLLYGPPGCGKTLLAKAVATESG 513

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEEL 526
            N   V GPE++S+  GESE+A+ E+F  A   AP V+F DE+DAIA  R    D G   
Sbjct: 514 ANFIAVKGPEIMSKWVGESERAIREIFRKARLYAPVVIFFDEIDAIASLRGIETDSGA-- 571

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           S+R+V  L+  MDG+ + + V+V+AATNRPD ++PAL RPGR D+ I             
Sbjct: 572 SERVVTQLITEMDGIQKLENVVVLAATNRPDLLDPALLRPGRFDKLI------------- 618

Query: 587 SPAAVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VP P    RLEIL      +  S  D  +  L+  T G+ GADL A+  E  ++ L
Sbjct: 619 ---YVPPPDFNARLEILRIHTRSIPLS-RDVNLVELARITEGYSGADLEAVVRETVMLAL 674

Query: 645 R 645
           R
Sbjct: 675 R 675


>gi|390938893|ref|YP_006402631.1| AAA ATPase [Desulfurococcus fermentans DSM 16532]
 gi|390192000|gb|AFL67056.1| AAA family ATPase, CDC48 subfamily [Desulfurococcus fermentans DSM
            16532]
          Length = 730

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/615 (42%), Positives = 357/615 (58%), Gaps = 99/615 (16%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL      ++++I I    +     LG+ P KG+LL+GPPGTGKT LA+  A++    
Sbjct: 177  IGGLGNIIDKIREMIEIPLKYRKVFRKLGIEPPKGILLYGPPGTGKTLLAKALANEVNAY 236

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSA---SQSAPAVVFIDELDAIAPARKDGGEELSQ 528
              T+NGPE++S+ YGESEQ L E+F  A   S+  PA++FIDE+DAIAP R +   E+ +
Sbjct: 237  FVTINGPEIMSKYYGESEQRLREIFKLAKKKSRKNPAIIFIDEIDAIAPKRDEVVGEVER 296

Query: 529  RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            R+VA LL LMDG+     V+VIAATNRP++++PALRRPGR DREIEI M           
Sbjct: 297  RVVAQLLALMDGLESRGNVIVIAATNRPNALDPALRRPGRFDREIEIPM----------- 345

Query: 589  AAVPSPAQRLEILHALLSGM-EHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
               P    RLEIL      + E  +L  +V+   +A  THG+ GADL      AALV   
Sbjct: 346  ---PDKKGRLEILKIHTRRLRELGILSEDVDLNKLAEITHGYTGADL------AALV--- 393

Query: 646  RYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
                      VLH+                            R  +    P    LP  L
Sbjct: 394  -------KEAVLHAI---------------------------RRQIPLDQPSEWPLPDDL 419

Query: 706  LSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREV 765
            L+S                                  +K+   DF  A   + PS +RE+
Sbjct: 420  LTS----------------------------------IKITFEDFLFAYRSIVPSGLREI 445

Query: 766  ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
             +EVP V+W D+GG  EVK  L E VE P ++ E ++R G +PP G+L++GPPGC KTL+
Sbjct: 446  HVEVPDVRWSDIGGLEEVKRSLRENVELPLRYPEIYERYGIKPPRGVLLYGPPGCGKTLL 505

Query: 826  ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
            A+AVA+E+G NF+AVKGPE+ SKWVGESE+A+R +F KAR  AP +IFFDEID +A++RG
Sbjct: 506  AKAVATESGANFIAVKGPEIMSKWVGESERAIREIFRKARLYAPVVIFFDEIDAIASLRG 565

Query: 886  KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
             E+D    S+RV++QL+ E+DG+ +  NV V+AATNRPD +DPALLRPGRFD+L+YV PP
Sbjct: 566  IETDS-GASERVVTQLITEMDGIQKLENVVVLAATNRPDLLDPALLRPGRFDKLIYVPPP 624

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI 1005
            +   R EI RIH R IP S DV++ ELA ++EG +GAD+  + RE  + A+ E+     +
Sbjct: 625  DFNARLEILRIHTRSIPLSRDVDLVELARITEGYSGADLEAVVRETVMLALRESPFIEMV 684

Query: 1006 TMQHLKTAIRHVQPS 1020
              +H   A+  V+PS
Sbjct: 685  GRKHFMNALELVKPS 699



 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 174/286 (60%), Gaps = 29/286 (10%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E + E P+V +ED+GG   +  ++ E +E P K+++ F+++G  PP GIL++GPPG  KT
Sbjct: 164  EPVGEFPRVTFEDIGGLGNIIDKIREMIEIPLKYRKVFRKLGIEPPKGILLYGPPGTGKT 223

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF----AKARANAPSIIFFDEIDG 879
            L+A+A+A+E    F+ + GPE+ SK+ GESE+ +R +F     K+R N P+IIF DEID 
Sbjct: 224  LLAKALANEVNAYFVTINGPEIMSKYYGESEQRLREIFKLAKKKSRKN-PAIIFIDEIDA 282

Query: 880  LAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            +A  R  +     V  RV++QLL  +DGL  R NV VIAATNRP+ +DPAL RPGRFDR 
Sbjct: 283  IAPKR--DEVVGEVERRVVAQLLALMDGLESRGNVIVIAATNRPNALDPALRRPGRFDRE 340

Query: 940  LYVGPPNETDREEIFRIHLRKIP----CSSDVNIRELACLSEGCTGADISLICREAAISA 995
            + +  P++  R EI +IH R++      S DV++ +LA ++ G TGAD++ + +EA + A
Sbjct: 341  IEIPMPDKKGRLEILKIHTRRLRELGILSEDVDLNKLAEITHGYTGADLAALVKEAVLHA 400

Query: 996  IEEN---------------LDASRITMQHLKTAIRHVQPS---EIH 1023
            I                  L + +IT +    A R + PS   EIH
Sbjct: 401  IRRQIPLDQPSEWPLPDDLLTSIKITFEDFLFAYRSIVPSGLREIH 446



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 137/241 (56%), Gaps = 25/241 (10%)

Query: 411 SKLGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL + + ++ +++ +           G++P +GVLL+GPPG GKT LA+  A +SG
Sbjct: 455 SDIGGLEEVKRSLRENVELPLRYPEIYERYGIKPPRGVLLYGPPGCGKTLLAKAVATESG 514

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEEL 526
            N   V GPE++S+  GESE+A+ E+F  A   AP V+F DE+DAIA  R    D G   
Sbjct: 515 ANFIAVKGPEIMSKWVGESERAIREIFRKARLYAPVVIFFDEIDAIASLRGIETDSGA-- 572

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           S+R+V  L+  MDG+ + + V+V+AATNRPD ++PAL RPGR D+ I             
Sbjct: 573 SERVVTQLITEMDGIQKLENVVVLAATNRPDLLDPALLRPGRFDKLI------------- 619

Query: 587 SPAAVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VP P    RLEIL      +  S  D ++  L+  T G+ GADL A+  E  ++ L
Sbjct: 620 ---YVPPPDFNARLEILRIHTRSIPLS-RDVDLVELARITEGYSGADLEAVVRETVMLAL 675

Query: 645 R 645
           R
Sbjct: 676 R 676


>gi|242399369|ref|YP_002994793.1| Pk-cdcA protein [Thermococcus sibiricus MM 739]
 gi|242265762|gb|ACS90444.1| Pk-cdcA protein [Thermococcus sibiricus MM 739]
          Length = 839

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/653 (39%), Positives = 383/653 (58%), Gaps = 63/653 (9%)

Query: 391  TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
             LP A ++  + V     +DI   GGL      +++++ +          LG+ P KGVL
Sbjct: 195  VLPQAVEVREEKVPEVTYEDI---GGLKDAVQKIREMVELPLKHPELFERLGIEPPKGVL 251

Query: 449  LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
            L+GPPGTGKT LA+  A+++  +   +NGPE++S+ YGESE+ L ++F  A ++AP+++F
Sbjct: 252  LYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKYYGESEERLRDIFKEAEENAPSIIF 311

Query: 509  IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
            IDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VI ATNRPD+++PALRRPGR
Sbjct: 312  IDEIDAIAPKREEVTGEVEKRVVSQLLTLMDGLKSRGKVIVIGATNRPDALDPALRRPGR 371

Query: 569  LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 628
             DREIE+               VP    R EIL     GM    L+ E +  S+      
Sbjct: 372  FDREIEV--------------GVPDKQGRKEILQIHTRGMP---LEPEYDKRSVLRVLNS 414

Query: 629  GADLAALCNEAALVCLRRYSKIQTSSDV---LHSTGTLF-EFEGH-SDTMLQDSDCSRNI 683
              +  A   E     +++    +  SD+   L   G L+ E      D+ML++      +
Sbjct: 415  LKNREAFDKERIEEMIQKIENAKEESDIKITLKEDGELYKEVRARLIDSMLEE------L 468

Query: 684  TESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCAL 743
             E +   + +     +     ++   L   G V+   +     V               L
Sbjct: 469  AEKTHGFVGADLAALAREAAMVVLRRLITEGKVNPEEEKIPPEVLQE------------L 516

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            K+   DF +A   + PSA+REV++EVP V+W+D+GG   VK +L EAVEWP K+ +AF+R
Sbjct: 517  KVTKNDFYEALKMIEPSALREVLIEVPNVRWDDIGGLENVKQELKEAVEWPLKYPKAFQR 576

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+ ++GPE+ SKWVGESEK +R +F K
Sbjct: 577  LGITPPKGILLYGPPGTGKTLLAKAVANESEANFIGIRGPEVLSKWVGESEKRIREIFRK 636

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            AR  AP+++F DE+D +A +RG E D   V+DR+++QLL E+DG+ +   V VIAATNRP
Sbjct: 637  ARQAAPTVVFIDEVDSIAPMRGGEGD--RVTDRLINQLLTEMDGIEENSGVVVIAATNRP 694

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            D +DPALLRPGRFDRL+ V  P+E  R EI ++H R++P +SDV+++ELA  +EG +GAD
Sbjct: 695  DILDPALLRPGRFDRLILVPAPDEKARLEILKVHTRRVPLASDVSLQELAKKTEGYSGAD 754

Query: 984  ISLICREAAISAI----------------EENLDASRITMQHLKTAIRHVQPS 1020
            ++ + REAA  A+                EE L+  +++    + A++ V+PS
Sbjct: 755  LAALVREAAFVALRRAVSITSRDLVEDQAEEFLEKLKVSKGDFEDAMKKVKPS 807



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/216 (50%), Positives = 149/216 (68%), Gaps = 2/216 (0%)

Query: 755 MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
           ++V P A+     +VP+V +ED+GG ++   ++ E VE P KH E F+R+G  PP G+L+
Sbjct: 193 IEVLPQAVEVREEKVPEVTYEDIGGLKDAVQKIREMVELPLKHPELFERLGIEPPKGVLL 252

Query: 815 FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
           +GPPG  KTL+A+AVA+EA  +F+A+ GPE+ SK+ GESE+ +R +F +A  NAPSIIF 
Sbjct: 253 YGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKYYGESEERLRDIFKEAEENAPSIIFI 312

Query: 875 DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
           DEID +A  R +E  G  V  RV+SQLL  +DGL  R  V VI ATNRPD +DPAL RPG
Sbjct: 313 DEIDAIAPKR-EEVTG-EVEKRVVSQLLTLMDGLKSRGKVIVIGATNRPDALDPALRRPG 370

Query: 935 RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIR 970
           RFDR + VG P++  R+EI +IH R +P   + + R
Sbjct: 371 RFDREIEVGVPDKQGRKEILQIHTRGMPLEPEYDKR 406


>gi|116753401|ref|YP_842519.1| AAA family ATPase, CDC48 subfamily protein [Methanosaeta thermophila
            PT]
 gi|116664852|gb|ABK13879.1| AAA family ATPase, CDC48 subfamily [Methanosaeta thermophila PT]
          Length = 739

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/626 (41%), Positives = 361/626 (57%), Gaps = 99/626 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++SG +
Sbjct: 194  VGGLRAEVQRVREMIELPMKHPEVFRKLGIDPPKGVLLYGPPGTGKTLIAKAVANESGAS 253

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F++ GPE++S+ YGESEQ L E+F+ A+ + P++VFIDELD+IAP R +   E+ +R+V
Sbjct: 254  FFSIAGPEIMSKYYGESEQRLREIFEEANSNTPSIVFIDELDSIAPKRSEVTGEVERRVV 313

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL +MDG+     ++VI ATNR D+I+PALRRPGR DREIEI               V
Sbjct: 314  AQLLAMMDGLKERGQLVVIGATNRIDAIDPALRRPGRFDREIEI--------------GV 359

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R+EIL   +  M  +  D  +E L+  THGFVGAD+AALC EAA+  LRRY    
Sbjct: 360  PDRDDRVEILQIHVRNMPLA-DDVNLEELANRTHGFVGADIAALCKEAAMKALRRY---- 414

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                 L   GT             + D    I ES +   D       ++  S +   L 
Sbjct: 415  -----LPDLGT-------------EDDIPPEIVESMKVTRDDFEMALKEIEPSAMREVLV 456

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
                VS           DS GG+        +K EL++                      
Sbjct: 457  ELPKVS----------WDSVGGL------GQIKQELIE---------------------A 479

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            ++W                   P K  E F+ +G +PP GIL++GPPG  KTL+A+AVA+
Sbjct: 480  IEW-------------------PLKRPERFEHMGIKPPKGILLYGPPGTGKTLIAQAVAN 520

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF++V+GP+L SKWVGESE+A+R +F KA+  +P+IIFFDE+D +A +RG + +G 
Sbjct: 521  ETNANFISVRGPQLLSKWVGESERAIREIFRKAKQVSPTIIFFDELDAIAPMRGMD-EGA 579

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V++RV++QLL E+DGL    NV VI ATNRPD IDPALLR GRFDRL+ +GPP+   R 
Sbjct: 580  RVTERVVNQLLAEMDGLEDLKNVIVIGATNRPDMIDPALLRSGRFDRLIMIGPPDRDGRL 639

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EI RIH  +IP S DVN+ ELA L++G  GAD+  +CREA + A+ EN +A  + M+H  
Sbjct: 640  EILRIHASRIPNSEDVNLEELAELTDGYVGADLGALCREAVLLALRENENAEIVEMKHYL 699

Query: 1012 TAIRHVQP----SEIHSYKELSAKFQ 1033
             A++ V+P    S I  Y+ +S +F+
Sbjct: 700  EALKRVRPSVEESMISYYERISERFR 725



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 114/266 (42%), Positives = 173/266 (65%), Gaps = 16/266 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +E VGG R    ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 189  VTYESVGGLRAEVQRVREMIELPMKHPEVFRKLGIDPPKGVLLYGPPGTGKTLIAKAVAN 248

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+G +F ++ GPE+ SK+ GESE+ +R +F +A +N PSI+F DE+D +A  R + +   
Sbjct: 249  ESGASFFSIAGPEIMSKYYGESEQRLREIFEEANSNTPSIVFIDELDSIAPKRSEVTG-- 306

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R  + VI ATNR D IDPAL RPGRFDR + +G P+  DR 
Sbjct: 307  EVERRVVAQLLAMMDGLKERGQLVVIGATNRIDAIDPALRRPGRFDREIEIGVPDRDDRV 366

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI +IH+R +P + DVN+ ELA  + G  GADI+ +C+EAA+ A+               
Sbjct: 367  EILQIHVRNMPLADDVNLEELANRTHGFVGADIAALCKEAAMKALRRYLPDLGTEDDIPP 426

Query: 998  ENLDASRITMQHLKTAIRHVQPSEIH 1023
            E +++ ++T    + A++ ++PS + 
Sbjct: 427  EIVESMKVTRDDFEMALKEIEPSAMR 452


>gi|409095354|ref|ZP_11215378.1| AAA family ATPase [Thermococcus zilligii AN1]
          Length = 835

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 263/650 (40%), Positives = 382/650 (58%), Gaps = 59/650 (9%)

Query: 391  TLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLL 449
             LP A +E    +A  E     +GGLS     +++++ +          LG+ P KGVLL
Sbjct: 193  VLPQA-VEVHE-EAIPEVTYEDIGGLSDAIQKIREMVELPLKHPELFERLGIEPPKGVLL 250

Query: 450  HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
            +GPPGTGKT LA+  A+++  +   +NGPE++S+ YGESE+ L EVF  A ++AP+++FI
Sbjct: 251  YGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKFYGESEERLREVFKEAEENAPSIIFI 310

Query: 510  DELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
            DE+D+IAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+I+PALRRPGR 
Sbjct: 311  DEIDSIAPKREEVVGEVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGRF 370

Query: 570  DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLLDSEVEYLSMATHGF 627
            DREIE+               VP    R EIL     GM  E S    EV    +     
Sbjct: 371  DREIEV--------------GVPDKQGRKEILQIHTRGMPLEPSFEKGEV----LKVLDE 412

Query: 628  VGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEF-EGHSDTM--LQDSDCSRNIT 684
            VG+    +     L  L+   +   SS+ + S   L E+ E +SD    L D    R I 
Sbjct: 413  VGS---RVLEPEVLTRLKLQVERAGSSEEIKSI--LQEYGEIYSDVKARLVDKMLER-IA 466

Query: 685  ESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALK 744
            E +   + +     +     ++   L   G +S   +     V               L+
Sbjct: 467  EKTHGFVGADLAALAREAAMVVLRRLIGEGKISPEQERIPPEVLQE------------LR 514

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            +   DF +A   V PSA+REV++EVP V+W+D+GG  EVK QL EAVEWP K+  AF+R+
Sbjct: 515  VREEDFYEALKMVEPSALREVLIEVPNVRWDDIGGLEEVKQQLKEAVEWPLKYPRAFERL 574

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A++GPE+ SKWVGE+EK +R +F KA
Sbjct: 575  GIEPPKGILLYGPPGTGKTLLAKAVATESEANFIAIRGPEVLSKWVGETEKRIREIFRKA 634

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R  AP+IIF DEID +A  RG   +G    D +++QLL E+DG+ +   V VI ATNRPD
Sbjct: 635  RQAAPTIIFIDEIDAIAPARGS-YEGGKYLDTLINQLLTEMDGIDKNSGVVVIGATNRPD 693

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
             IDPALLRPGRFDRL+ V  P+E +R EI ++H R++P + DV+++++A  ++G +GAD+
Sbjct: 694  IIDPALLRPGRFDRLILVPAPDEKERLEILKVHTRRVPLAGDVDLKDIAKRTQGYSGADL 753

Query: 985  SLICREAAISAI--------------EENLDASRITMQHLKTAIRHVQPS 1020
              + REAA++A+              EE ++   +T +  + A++ V+PS
Sbjct: 754  EALVREAALTALRRMVSGSPGAGPGEEEFIEKLTVTRRDFEEALKRVKPS 803



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/320 (38%), Positives = 168/320 (52%), Gaps = 53/320 (16%)

Query: 336 VIGANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKS-LREGTLPN 394
           +IG  K+  +   ER  P+V + +      F          Y  L  V  S LRE     
Sbjct: 492 LIGEGKISPE--QERIPPEVLQELRVREEDF----------YEALKMVEPSALRE----- 534

Query: 395 AQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPP 453
             IE  NV+         +GGL +    LK+ +            LG+ P KG+LL+GPP
Sbjct: 535 VLIEVPNVRW------DDIGGLEEVKQQLKEAVEWPLKYPRAFERLGIEPPKGILLYGPP 588

Query: 454 GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
           GTGKT LA+  A +S  N   + GPEV+S+  GE+E+ + E+F  A Q+AP ++FIDE+D
Sbjct: 589 GTGKTLLAKAVATESEANFIAIRGPEVLSKWVGETEKRIREIFRKARQAAPTIIFIDEID 648

Query: 514 AIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           AIAPAR   +GG+ L   ++  LL  MDG+ +  GV+VI ATNRPD I+PAL RPGR DR
Sbjct: 649 AIAPARGSYEGGKYLDT-LINQLLTEMDGIDKNSGVVVIGATNRPDIIDPALLRPGRFDR 707

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEIL-----HALLSGMEHSLLDSEVEYLSMATHG 626
            I +            PA  P   +RLEIL        L+G      D +++ ++  T G
Sbjct: 708 LILV------------PA--PDEKERLEILKVHTRRVPLAG------DVDLKDIAKRTQG 747

Query: 627 FVGADLAALCNEAALVCLRR 646
           + GADL AL  EAAL  LRR
Sbjct: 748 YSGADLEALVREAALTALRR 767


>gi|390602881|gb|EIN12273.1| AAA-domain-containing protein [Punctularia strigosozonata HHB-11173
            SS5]
          Length = 857

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 270/707 (38%), Positives = 403/707 (57%), Gaps = 85/707 (12%)

Query: 347  TNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATV 406
            T  RS+P V+  + H    + +  +T V +    +  +++L+    P++      + A +
Sbjct: 203  TRTRSEPLVSPRISHP--IWTVGWDTTVVIE---DTPTRALKA---PSSLGTPWPIPAPL 254

Query: 407  EQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCA 465
            E   + +GGL K+ A ++D++ I  +        GL+P +G+LLHGPPGTGKT LAR  A
Sbjct: 255  ETAYNTVGGLDKQIAQIRDLLEIPLTRPELFRHFGLKPPRGILLHGPPGTGKTHLARAIA 314

Query: 466  HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-GE 524
              +  ++  +NGPE+ S  +GE+E  L  VF+ A + +P +V +DE+DA+ P R+D  G 
Sbjct: 315  ASTRSSVIIINGPELSSAYHGETEARLRGVFEEAREQSPCIVVLDEIDALCPRREDSSGG 374

Query: 525  ELSQRMVATLLNLMDGV---------------CRTDGVLVIAATNRPDSIEPALRRPGRL 569
            E+ +R+VATLL +MDG                     V+V+A TNRP++I+PALRRPGR 
Sbjct: 375  EVEKRVVATLLTIMDGFEVDNEGTDAGTVGDNATMSRVVVVATTNRPNAIDPALRRPGRF 434

Query: 570  DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 629
            DREIEI               +P    RL IL+ LLS   HS+  ++++ ++   HG+VG
Sbjct: 435  DREIEI--------------GIPDATARLSILNVLLSRTPHSISQTDLKSVAARAHGYVG 480

Query: 630  ADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 689
            ADLAA+  EA    ++R+   Q SS+        +      D        S   T ++ D
Sbjct: 481  ADLAAVVREAGTRAIKRWLSSQPSSN--------YPLRPLPDAPGGQESKSLPPTPATPD 532

Query: 690  CLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVD 749
             L    P T D      +S +P          NFH   +D+      S+K     L   D
Sbjct: 533  TL----PVTED------ASRIP----------NFHG--NDTEYPPPDSDKPS---LTQAD 567

Query: 750  FEKARMKVRPSAMREVIL---EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
               A   VRPSA+R + L   E P V++ D+GG  +V  +L E VEWP +H +AF R+G 
Sbjct: 568  LLLALPSVRPSALRSLYLPGTETP-VRYSDIGGLSDVVQKLRECVEWPLQHPDAFVRLGV 626

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
            R P G+L++GPPGCSKT++ RA+A E+G+NF++VKGPEL +K+VGESE++VR +F KAR 
Sbjct: 627  RAPRGVLLYGPPGCSKTMLVRALACESGVNFVSVKGPELLNKFVGESERSVREIFRKARG 686

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR-VNVTVIAATNRPDK 925
             AP I+FFDEID LA  R   +   SV++ V++ LL E+DG+ +  + VTV+AATN PD 
Sbjct: 687  VAPCILFFDEIDALATSRSTNTS--SVTEGVLTSLLTEMDGVQEMGLGVTVVAATNLPDA 744

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDV--NIRELACLSEGCTGAD 983
            ID AL+RPGR DRL+YVGPP+   REEI RI +R +    DV   + ELA  ++GC+GA+
Sbjct: 745  IDSALMRPGRLDRLIYVGPPDRNGREEILRIRMRNMSVGPDVLDRLSELAAATDGCSGAE 804

Query: 984  ISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYK 1026
            +  +C+EAA+  ++EN++A  +  +    A     R + P  +  Y+
Sbjct: 805  LVALCQEAALMTMKENIEAPYVPFRAFLAAAQASRRQITPDIVQKYE 851


>gi|380016377|ref|XP_003692162.1| PREDICTED: LOW QUALITY PROTEIN: transitional endoplasmic reticulum
            ATPase TER94-like [Apis florea]
          Length = 893

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/697 (38%), Positives = 403/697 (57%), Gaps = 61/697 (8%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG+ K+ A +K+++ +     S    +G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 203  IGGVRKQLAQIKEMVELPLRHPSLFKVIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 262

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPE++S+  GESE  L + F+ A +++PA++FIDELDAIAP R+    E+ +R+V
Sbjct: 263  FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHGEVERRIV 322

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+ ++  V+V+AATNRP+SI+PALRR GR D+EI+I               +
Sbjct: 323  SQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDI--------------GI 368

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
            P    RLEIL      M+ +  D E+E ++  THG VGADLA+LC+EAAL  +R    + 
Sbjct: 369  PDATGRLEILRIHTKNMKLAD-DVELEEIAAETHGHVGADLASLCSEAALQQIREKMDLI 427

Query: 651  -----QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTS-DLPTS 704
                    ++VL S     +   ++ T    S     I E      D      +  +   
Sbjct: 428  DLEEEHIDAEVLSSLAVTMDNFKYAMTKSSPSALRETIVEVPTVTWDDIGGLQNVKMELQ 487

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
             L   L     + +I +     + D       +E   +L + + +F+ A  K  PSA+RE
Sbjct: 488  ELVQLLCSEAALQQIREKMD--LIDLEEEHIDAEVLSSLAVTMDNFKYAMTKSSPSALRE 545

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
             I+EVP V W+D+GG + VK +L E V++P +H + F + G +P  G+L +GPPGC KTL
Sbjct: 546  TIVEVPTVTWDDIGGLQNVKMELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTL 605

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+A+A+E   NF++VKGPEL + W GESE  VR +F KARA AP ++FFDE+D +A  R
Sbjct: 606  LAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKSR 665

Query: 885  GKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            G    D    +DRV++Q+L E+DG+  + NV +I ATNRPD IDPA+LRPGR D+L+Y+ 
Sbjct: 666  GGTLGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 725

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
             P+E  RE IFR +LRK P + DV++  +A ++ G +GADI+ IC+ A   AI ++++ +
Sbjct: 726  LPDEKSREAIFRANLRKSPVAKDVDLSYIAKVTHGFSGADITEICQRACKLAIRQSIE-T 784

Query: 1004 RITMQHLKTAIRHVQ---------PSEIHSYKELSAKFQRLVHSNAEADESGYQ-----L 1049
             I  +  + +   V          P    ++ E + +F R   S ++ D   Y+     L
Sbjct: 785  EIRREKERASNPSVSMDMDEDDPVPEXTRAHFEEAMRFAR--RSVSDNDIRKYEMFAQTL 842

Query: 1050 RPSKSIGSNMWTLIKSISLFLCRFPAGLSQSESGSSG 1086
            + S+  GSN             RFP      +SG+SG
Sbjct: 843  QQSRGFGSNF------------RFP------QSGTSG 861



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 155/243 (63%), Gaps = 2/243 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P +H   FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 198  VGYDDIGGVRKQLAQIKEMVELPLRHPSLFKVIGVKPPRGILLYGPPGTGKTLIARAVAN 257

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K     
Sbjct: 258  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHG-- 315

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DG+ Q  +V V+AATNRP+ IDPAL R GRFD+ + +G P+ T R 
Sbjct: 316  EVERRIVSQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDIGIPDATGRL 375

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EI RIH + +  + DV + E+A  + G  GAD++ +C EAA+  I E +D   +  +H+ 
Sbjct: 376  EILRIHTKNMKLADDVELEEIAAETHGHVGADLASLCSEAALQQIREKMDLIDLEEEHID 435

Query: 1012 TAI 1014
              +
Sbjct: 436  AEV 438


>gi|388854871|emb|CCF51552.1| related to AFG2-ATPase of the CDC48/PAS1/SEC18 (AAA) family [Ustilago
            hordei]
          Length = 862

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/668 (39%), Positives = 381/668 (57%), Gaps = 115/668 (17%)

Query: 401  NVQATV--EQDISKLGGLSKEYAILKDIIISSSVKSTLSSL-GLRPTKGVLLHGPPGTGK 457
            NV A+   E   SKLGGL ++ A +K +I    +   +  L GL+P KGVLL+GPPGTGK
Sbjct: 240  NVAASAAREDPYSKLGGLDRQIAEIKTLIEMPLMSPEIFVLYGLKPPKGVLLYGPPGTGK 299

Query: 458  TSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAP 517
            TSLAR  A  +G +  T+NGPE+ S  +GE+E  L  +F  A + +P ++ IDE+DA+AP
Sbjct: 300  TSLARAVAAATGSSYLTINGPELSSAFHGETESKLRSIFREARRKSPCIIIIDEIDALAP 359

Query: 518  ARK---------DGGEELSQRMVATLLNLMDGVC-------------------------- 542
             R+         DG  E+ +R+VA LL L+DG+                           
Sbjct: 360  RREGGSGEGANTDGAGEVERRVVAQLLTLLDGMEEADVEDDDEAQQDEELDLRKPIDTAA 419

Query: 543  -------RTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPA 595
                   +   V+V+AATNRP++I+PALRRPGRLDREIEI               +P+ A
Sbjct: 420  ESVKAAKKPARVVVLAATNRPNAIDPALRRPGRLDREIEI--------------GIPTAA 465

Query: 596  QRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSS 654
             R EI+ AL+S + H L   ++E L+  THG+VGADL+AL  EA +  +RR +++ Q++S
Sbjct: 466  ARGEIIRALISTVPHDLTAEKIEELASRTHGYVGADLSALVREAGMRAVRRTFARRQSAS 525

Query: 655  DVLHSTGTLFEFEGHSDTM-LQDSDCSRNITESSRDCLDSASPCTSDLPTSL-LSSSLPL 712
            D         + E    +M LQ +  + ++  S+ D + +A     DL  +L L     +
Sbjct: 526  D---------QLEAKVQSMSLQSAPAAASVEASTLDKVTAA-----DLQAALVLVRPSAM 571

Query: 713  RGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKV 772
            R    E    F + ++ SS                                      P V
Sbjct: 572  REIFLEPPKIFWSDIAGSS-------------------------------------TPSV 594

Query: 773  KWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASE 832
                    + V+ Q+ E VEWP KH  AF R+G  PP G+L++GPPGCSKTL+ARA+A+E
Sbjct: 595  GGSGALSAKSVQAQVRELVEWPIKHSAAFSRLGISPPRGVLLYGPPGCSKTLIARALATE 654

Query: 833  AGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESDGV 891
            +GLNFLAVKGPEL+SK+VGESE+AVR  F KARA APSIIFFDEID L+  R G  S G 
Sbjct: 655  SGLNFLAVKGPELYSKYVGESERAVRDTFKKARAAAPSIIFFDEIDALSTSRDGDSSSGD 714

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +++ R+++ LL E+DG+    +V VI ATNRP  +DPALLRPGR DRL+YVGPP+   R+
Sbjct: 715  ALNSRIIATLLNEMDGIEAMSDVIVIGATNRPQSLDPALLRPGRLDRLVYVGPPDHEARK 774

Query: 952  EIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHL 1010
            +I R  + K+  C+  +++  L  ++EGC+GA++  IC+EA + A++E+++   I  +H 
Sbjct: 775  QILRSRMAKMAVCADQIDLDRLGQMTEGCSGAEVVSICQEAGLLAMDEDINCQAIEQRHF 834

Query: 1011 KTAIRHVQ 1018
            ++A   V+
Sbjct: 835  ESAASAVK 842


>gi|260946187|ref|XP_002617391.1| hypothetical protein CLUG_02836 [Clavispora lusitaniae ATCC 42720]
 gi|238849245|gb|EEQ38709.1| hypothetical protein CLUG_02836 [Clavispora lusitaniae ATCC 42720]
          Length = 809

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 270/676 (39%), Positives = 383/676 (56%), Gaps = 82/676 (12%)

Query: 366  FVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKD 425
             ++N  TKV +     A   SLR+  LP     F  V           GGL++  A+L+ 
Sbjct: 201  LLVNQSTKVSV----AATKDSLRKYHLPQ-PFAFDQV-----------GGLARPVALLRA 244

Query: 426  II-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQN 484
             + +     +  S  G+ P +G+LLHGPPGTGKT L R  AH+   ++  VNGP +VS+ 
Sbjct: 245  AVQLPLHHAALFSDFGISPPRGILLHGPPGTGKTMLLRCVAHECQAHVLMVNGPSIVSKY 304

Query: 485  YGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVC 542
             GE+E AL  VF  A +  PA++F+DE+D++AP R  +D GE  S R+VATLL +MDG+ 
Sbjct: 305  LGETETALRAVFAEAVRFQPAIIFMDEIDSLAPKRGSEDAGETES-RVVATLLTMMDGMA 363

Query: 543  RTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILH 602
                V+V+ ATNRP++I+PALRRPGR D+E+E+               +P  A R +IL 
Sbjct: 364  DAGRVVVVGATNRPNAIDPALRRPGRFDQEVEV--------------GIPDAAAREDILV 409

Query: 603  ALLSGMEHSLLD-SEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG 661
              L+ M    +  +E+  L+  THG+VGADLAA+C E  +  + R      + D   +TG
Sbjct: 410  RQLARMRRCRVSRAEIRALAEKTHGYVGADLAAVCREGVMRAIGR----ALARDQSETTG 465

Query: 662  TLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIAD 721
               E  G+              TESS        P T  +P +  SS+ P+        D
Sbjct: 466  HQSETTGNGPE-----------TESS--------PETESIPETE-SSAGPV--------D 497

Query: 722  NFH-NGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ 780
            N   + VS +SG    ++      +E  D + A  +VRPSAMRE+ LE+P+V W D+ GQ
Sbjct: 498  NRPIDSVSLASGSHVDTQ------VEARDLDAALAEVRPSAMREIFLEMPRVAWADIAGQ 551

Query: 781  REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAV 840
              +K +L E V+ P      F R+G   P G+L++GPPGCSKTL A+A+ASE+GLNFLAV
Sbjct: 552  HALKQKLTEVVQLPLSAAPTFARLGISAPKGVLLYGPPGCSKTLAAKALASESGLNFLAV 611

Query: 841  KGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQ 900
            KGPE+F+K+VGESE+AVR +F KARA APSI+F DEID LA    ++    S    V++ 
Sbjct: 612  KGPEVFNKYVGESERAVREIFRKARAAAPSIVFLDEIDALAC---RDESATSAGQNVLTS 668

Query: 901  LLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK 960
            LL E+DG+ +   V V+AATNRP  IDPALLRPGR DR +YV PP+   R E+      K
Sbjct: 669  LLNEIDGVEELQGVVVVAATNRPTDIDPALLRPGRLDRHIYVAPPDREARRELIARRCAK 728

Query: 961  IPC-SSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAI----R 1015
                 +D     LA  +EGC+GA+++L+C+EA ++AI E+    ++  +H   A+    R
Sbjct: 729  FSVDGADELFARLADATEGCSGAEVALLCQEAGLAAIMEDSACEKVEERHFDHALKGISR 788

Query: 1016 HVQPSEIHSYKELSAK 1031
             + P  I  Y   + +
Sbjct: 789  GITPDMIEYYTAFAQR 804


>gi|433419153|ref|ZP_20405197.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax sp.
           BAB2207]
 gi|432199514|gb|ELK55682.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax sp.
           BAB2207]
          Length = 690

 Score =  444 bits (1143), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/582 (43%), Positives = 340/582 (58%), Gaps = 94/582 (16%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL+ E   +++++ +          LG+ P +GVLLHGPPGTGKT LAR  A+++  +
Sbjct: 191 IGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           P    R EIL     GM  S    +++ L+  THGFVGAD+ AL  EAA+  LRRY    
Sbjct: 357 PDEEGRKEILQIHTRGMPLSDD-VDLDDLADDTHGFVGADIEALTKEAAMKALRRY---- 411

Query: 652 TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                 L + D  R                  D+P SL+     
Sbjct: 412 ----------------------LPEIDLDR-----------------EDIPPSLID---- 428

Query: 712 LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
            R  V           +D  GG     +  A++  LV+  K                   
Sbjct: 429 -RMVVK----------NDDFGGALGEVEPSAMREVLVEIPK------------------- 458

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V W DVGG    K ++ E+VEWP    E F+R+G   P G+L++GPPG  KTL+A+AVA+
Sbjct: 459 VTWNDVGGLEGPKQKVQESVEWPLTTPEKFQRMGIEAPKGVLLYGPPGTGKTLIAKAVAN 518

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           E   NF++V+GP+L SKWVGESEKA+R  F KAR  +P+IIFFDE+D LA  RG +  G 
Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDALAPARGNDM-GN 577

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
           +VS+RV++QLL ELDGL    NV VIAATNRPD IDPAL+R GRFDRL+ +G P E  RE
Sbjct: 578 NVSERVVNQLLTELDGLEDAGNVMVIAATNRPDMIDPALIRSGRFDRLVLIGQPEEEGRE 637

Query: 952 EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAI 993
           +I  IH ++ P + DV++RE+A +++G  G+D+  ICREAAI
Sbjct: 638 QILDIHTQQSPLAPDVSLREIAEITDGYVGSDLESICREAAI 679



 Score =  209 bits (532), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+ARAVA+
Sbjct: 186  ITYEDIGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLARAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEEGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++ +LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVDLDDLADDTHGFVGADIEALTKEAAMKALRRYL 412


>gi|291401851|ref|XP_002717306.1| PREDICTED: Cell Division Cycle related family member (cdc-48.2)-like
            [Oryctolagus cuniculus]
          Length = 891

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/649 (38%), Positives = 375/649 (57%), Gaps = 105/649 (16%)

Query: 396  QIEFQNVQATV-EQDIS------KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGV 447
            +I F  ++    EQD S       +GGL+ +   ++++I +         + G+   +GV
Sbjct: 329  KINFTKIRTNAKEQDDSLKVTYDMIGGLNSQLKAIREMIELPLKQPQLFKTYGIPAPRGV 388

Query: 448  LLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVV 507
            LL+GPPGTGKT +AR   ++ G  +  +NGPE++S+ YGE+E  L ++F  A+Q  PA++
Sbjct: 389  LLYGPPGTGKTMIARAIGNEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATQRQPAII 448

Query: 508  FIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALR 564
            FIDELDA+ P R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALR
Sbjct: 449  FIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPQALDAALR 508

Query: 565  RPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT 624
            RPGR D+E+EI               VP+   RL+IL  LL  + H L  +E+  ++ + 
Sbjct: 509  RPGRFDKEVEI--------------GVPNAQDRLDILQKLLRRIPHLLTKAELLQVANSA 554

Query: 625  HGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNIT 684
            HG+VGADL ALCNEA L   RR                   F+ H +  L DS  +  + 
Sbjct: 555  HGYVGADLKALCNEAGLRAFRRV------------------FDKHPN--LPDSKMAGLVK 594

Query: 685  ESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALK 744
             S RD L + +      P+++            E+A +  N      GG+          
Sbjct: 595  ISLRDFLQAMNEIR---PSAM-----------REVAVDIPNVSWSDIGGL---------- 630

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
                  E  ++K++ +           V+W                   P KH E+F R+
Sbjct: 631  ------ENVKLKLKQA-----------VEW-------------------PLKHPESFNRM 654

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F KA
Sbjct: 655  GIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKA 714

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            RA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VT++AATNRPD
Sbjct: 715  RAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGVQQLKDVTILAATNRPD 774

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
            +ID AL+RPGR DRL+YV  P+   R EIF++    +P S++V++ EL   ++  +GA+I
Sbjct: 775  RIDKALMRPGRIDRLIYVPLPDGATRREIFKLQFHSMPISNEVDLDELVLQTDTYSGAEI 834

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
              +CREAA+ A+EE++ A+ +  +H   A+  V P    S +    ++Q
Sbjct: 835  IAVCREAALLALEEDIQANCVMKRHFTQALSTVTPRIPESLRRFYEEYQ 883


>gi|410671204|ref|YP_006923575.1| AAA family ATPase [Methanolobus psychrophilus R15]
 gi|409170332|gb|AFV24207.1| AAA family ATPase [Methanolobus psychrophilus R15]
          Length = 745

 Score =  434 bits (1117), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 249/643 (38%), Positives = 355/643 (55%), Gaps = 98/643 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          L + P KG++L GPPGTGKT +A+  A++S  N
Sbjct: 194  IGGLGTEIQRVREMIELPLKHPELFQRLNIEPPKGIILFGPPGTGKTLIAKAVANESRAN 253

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
               + GPE++ + YGESE+ + ++F+ A + AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 254  FLYIAGPEIMGKYYGESEERIRKIFEEAEEEAPSIIFIDEIDSIAPKRQNVTGEVERRVV 313

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL +MDG+     V+VI ATNR D+I+PALRRPGR DREIEI               V
Sbjct: 314  AQLLTMMDGLEERGQVVVIGATNRVDAIDPALRRPGRFDREIEI--------------GV 359

Query: 592  PSPAQRLEILHALLSG--MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
            P    RLEIL     G  +   +    +EYL+  T GFVGADL AL  EAA+  LRR   
Sbjct: 360  PDTDDRLEILQIHTRGVPLREDVTPEMLEYLAKHTQGFVGADLLALVQEAAMKSLRR--- 416

Query: 650  IQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSS 709
                                 D  L+D +    I       LD+ + C  D  ++L    
Sbjct: 417  ------------------ALPDINLEDEEIPPEI-------LDTINVCKEDFESAL---- 447

Query: 710  LPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
                    EI  +    V      +  S+ G          +KA+ ++           V
Sbjct: 448  -------REIEPSAMREVLVEVPAVKWSDVGG--------LDKAKQEI-----------V 481

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
              V+W                   P    E F  +G RPP GIL+FGPPG  KTL+A+AV
Sbjct: 482  EAVEW-------------------PLTRPEKFVEMGIRPPKGILLFGPPGTGKTLIAQAV 522

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E+  NF++VKGP++ SKWVGESEKA+R  F KAR  AP I+FFDEID +A +R   ++
Sbjct: 523  ANESNANFISVKGPQMLSKWVGESEKAIRETFKKARQVAPCIVFFDEIDSIAPMRSAMTE 582

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               VS+R+++QLL ELDGL     + VIAATNRPD +DPALLR GRFDRL+ VG    T 
Sbjct: 583  DGKVSERIVNQLLTELDGLEPLKEIVVIAATNRPDMLDPALLRSGRFDRLVLVGQSTLTG 642

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQH 1009
            R++IFRIH R IP   DVNI +LA L+EG  G+DI  +CREA + A+ EN ++ +++M++
Sbjct: 643  RKDIFRIHTRNIPMGDDVNIDDLAILTEGFVGSDIEAVCREAVMLALRENFESDKVSMKY 702

Query: 1010 LKTAIRHVQPS----EIHSYKELSAKFQRLVHSNAEADESGYQ 1048
             + A+  V+P+     I  Y+ + A+F+  +     +   GY+
Sbjct: 703  FREALAKVRPTLSENMIEYYERIQAQFKGGIKKEEPSSYIGYR 745



 Score =  215 bits (548), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/267 (42%), Positives = 161/267 (60%), Gaps = 20/267 (7%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E +E P KH E F+R+   PP GI++FGPPG  KTL+A+AVA+
Sbjct: 189  ITYEDIGGLGTEIQRVREMIELPLKHPELFQRLNIEPPKGIILFGPPGTGKTLIAKAVAN 248

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  NFL + GPE+  K+ GESE+ +R +F +A   APSIIF DEID +A  R   +   
Sbjct: 249  ESRANFLYIAGPEIMGKYYGESEERIRKIFEEAEEEAPSIIFIDEIDSIAPKRQNVTG-- 306

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R  V VI ATNR D IDPAL RPGRFDR + +G P+  DR 
Sbjct: 307  EVERRVVAQLLTMMDGLEERGQVVVIGATNRVDAIDPALRRPGRFDREIEIGVPDTDDRL 366

Query: 952  EIFRIHLRKIPCSSDVN---IRELACLSEGCTGADISLICREAAISAIE----------- 997
            EI +IH R +P   DV    +  LA  ++G  GAD+  + +EAA+ ++            
Sbjct: 367  EILQIHTRGVPLREDVTPEMLEYLAKHTQGFVGADLLALVQEAAMKSLRRALPDINLEDE 426

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E LD   +  +  ++A+R ++PS
Sbjct: 427  EIPPEILDTINVCKEDFESALREIEPS 453



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 140/240 (58%), Gaps = 22/240 (9%)

Query: 411 SKLGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL K +  I++ +    +       +G+RP KG+LL GPPGTGKT +A+  A++S 
Sbjct: 468 SDVGGLDKAKQEIVEAVEWPLTRPEKFVEMGIRPPKGILLFGPPGTGKTLIAQAVANESN 527

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR----KDGGEE 525
            N  +V GP+++S+  GESE+A+ E F  A Q AP +VF DE+D+IAP R    +DG  +
Sbjct: 528 ANFISVKGPQMLSKWVGESEKAIRETFKKARQVAPCIVFFDEIDSIAPMRSAMTEDG--K 585

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +S+R+V  LL  +DG+     ++VIAATNRPD ++PAL R GR DR + +  S L     
Sbjct: 586 VSERIVNQLLTELDGLEPLKEIVVIAATNRPDMLDPALLRSGRFDRLVLVGQSTLTG--- 642

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                      R +I       +     D  ++ L++ T GFVG+D+ A+C EA ++ LR
Sbjct: 643 -----------RKDIFRIHTRNIPMG-DDVNIDDLAILTEGFVGSDIEAVCREAVMLALR 690


>gi|282165485|ref|YP_003357870.1| cell division control protein 48 [Methanocella paludicola SANAE]
 gi|282157799|dbj|BAI62887.1| cell division control protein 48 [Methanocella paludicola SANAE]
          Length = 765

 Score =  434 bits (1117), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 254/642 (39%), Positives = 360/642 (56%), Gaps = 112/642 (17%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL +E  +++++I +          LG+ P KGVLL+GPPGTGKT +A+  A ++  N
Sbjct: 183  IGGLKREIGLVREMIELPLRHPELFQKLGIDPPKGVLLYGPPGTGKTMIAKAVASETDAN 242

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +++GPE++S+ YGESE+ L ++F  A  +AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 243  FISISGPEIMSKYYGESEKQLRDIFKEAEDNAPSIIFIDEIDSIAPRREEVTGEVERRVV 302

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL LMDG+     V+V+AATNRP++++PALRR GR DREIEI               V
Sbjct: 303  AQLLALMDGLQARGQVIVVAATNRPNAVDPALRRGGRFDREIEI--------------GV 348

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    RLEILH    GM  +  D  +E L+  THGFVGAD+A+LC EAA+  LR      
Sbjct: 349  PDKNGRLEILHVHTRGMPLA-SDVNLEKLANVTHGFVGADIASLCKEAAMHALR------ 401

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                T+L + D  + I +   D L        D   ++  S+  
Sbjct: 402  --------------------TILPEIDIEKEIPQEVMDMLQIKMVDFEDALKNIEPSA-- 439

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
            +R    E+  N H   SD  G                  EK + ++R +           
Sbjct: 440  MREVFVEVP-NVH--WSDIGG-----------------LEKVKQELRET----------- 468

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V+W                   P K+++ F    T  P GIL+FGPPG  KTL+A+AVA+
Sbjct: 469  VEW-------------------PLKYKDVFDITHTVAPKGILVFGPPGTGKTLLAKAVAN 509

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  NF+++KGPE+ SKWVGESEKA+R  F +AR +AP+IIFFDEID +A  RG  SD  
Sbjct: 510  ESEANFISIKGPEVLSKWVGESEKAIRETFRRARQSAPTIIFFDEIDAIAPTRGMSSDS- 568

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V++RV+SQLL ELDGL +  +V V+AATNRPD +D ALLRPGR DRLLY+ PP+E  R 
Sbjct: 569  HVTERVVSQLLTELDGLEELHSVVVLAATNRPDMVDTALLRPGRLDRLLYIPPPDEKSRV 628

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS-------- 1003
            EIFRIH    P   D++ + LA  +    GADI  +CREAA+ AI + ++ +        
Sbjct: 629  EIFRIHTEGKPLGPDIDFQSLAKRTPDYVGADIEAVCREAAMMAIRDYINGAMSPEEAKS 688

Query: 1004 -----RITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLV 1036
                 +ITM+H   A++ ++PS     +  Y+ L+  F R V
Sbjct: 689  RAADIKITMKHFDGALKKIKPSASRESMKQYERLAENFARQV 730



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 121/277 (43%), Positives = 183/277 (66%), Gaps = 18/277 (6%)

Query: 758  RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
            +P+A  E + +VP++ +ED+GG +     + E +E P +H E F+++G  PP G+L++GP
Sbjct: 166  KPAA--EKLEKVPRLTYEDIGGLKREIGLVREMIELPLRHPELFQKLGIDPPKGVLLYGP 223

Query: 818  PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
            PG  KT++A+AVASE   NF+++ GPE+ SK+ GESEK +R +F +A  NAPSIIF DEI
Sbjct: 224  PGTGKTMIAKAVASETDANFISISGPEIMSKYYGESEKQLRDIFKEAEDNAPSIIFIDEI 283

Query: 878  DGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
            D +A  R +E  G  V  RV++QLL  +DGL  R  V V+AATNRP+ +DPAL R GRFD
Sbjct: 284  DSIAP-RREEVTG-EVERRVVAQLLALMDGLQARGQVIVVAATNRPNAVDPALRRGGRFD 341

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI- 996
            R + +G P++  R EI  +H R +P +SDVN+ +LA ++ G  GADI+ +C+EAA+ A+ 
Sbjct: 342  REIEIGVPDKNGRLEILHVHTRGMPLASDVNLEKLANVTHGFVGADIASLCKEAAMHALR 401

Query: 997  -------------EENLDASRITMQHLKTAIRHVQPS 1020
                         +E +D  +I M   + A+++++PS
Sbjct: 402  TILPEIDIEKEIPQEVMDMLQIKMVDFEDALKNIEPS 438


>gi|82596542|ref|XP_726304.1| cell division cycle ATPase [Plasmodium yoelii yoelii 17XNL]
 gi|23481659|gb|EAA17869.1| putative cell division cycle ATPase [Plasmodium yoelii yoelii]
          Length = 1078

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/611 (38%), Positives = 351/611 (57%), Gaps = 44/611 (7%)

Query: 403  QATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
            Q T + +   LGG+ K+   ++++I +         S+G+   KGVL+HG PGTGKTS+A
Sbjct: 427  QNTDDINYDDLGGMKKQLNKIRELIELPLKYPEIFVSIGISAPKGVLMHGIPGTGKTSIA 486

Query: 462  RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
            +  A++S    + +NGPE++S++ GESEQ L ++F  AS+  P ++FIDE+D+IA  R  
Sbjct: 487  KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRNK 546

Query: 522  GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
               EL +R+V+ LL LMDG+ + + VLV+AATNRP+S++PALRR GR DREIEI      
Sbjct: 547  SSNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSLDPALRRFGRFDREIEI------ 600

Query: 582  SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT--HGFVGADLAALCNEA 639
                     VP    R EIL   L+  +   LD +V    +A   HG+VGADLA LC EA
Sbjct: 601  --------PVPDEQGRYEIL---LTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEA 649

Query: 640  ALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTS 699
            A+ C++ +         +H      + E              NI E++ +     +   S
Sbjct: 650  AIQCIKEH---------IH----FLDLEEEDFIEFMKLSVDGNINENNDNHKSENTYKNS 696

Query: 700  DLPTSLLSSSLPLR-GTVSEIADNFHNGV--SDSSGGMFMSEKG-------CALKLELVD 749
            +    + +     R G  +       N     + SG  F  +           L ++   
Sbjct: 697  NFKGGVKNFKNVFRLGNKNRTEQTSQNDKINMNKSGNKFDQKTKKIPSYILNKLTIKAKH 756

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PS++RE  +++P V W+D+GG + VK QL E + +P +++  + +  +   
Sbjct: 757  FQHALNICNPSSLRERQVQIPTVTWDDIGGMQYVKEQLKETILYPLEYKHLYNKFNSNYN 816

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             GIL++GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR LF KARA +P
Sbjct: 817  KGILLYGPPGCGKTLLAKAIANECNANFISVKGPELLTMWFGESEANVRDLFDKARAASP 876

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
             IIFFDEID LA  R   +     SDRV++Q+L E+DG++++  + +IAATNRPD +D A
Sbjct: 877  CIIFFDEIDSLAKERNSNN-NNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKA 935

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            L RPGR D+L+Y+  P+   R  IF+  L+  P + DV+I ++A  +EG +GADI+ +C+
Sbjct: 936  LTRPGRLDKLIYISLPDFKSRCSIFKAILKNTPLNKDVDINDMAKRTEGFSGADITNLCQ 995

Query: 990  EAAISAIEENL 1000
             A   AI+E +
Sbjct: 996  SAVNEAIKETI 1006


>gi|156094884|ref|XP_001613478.1| cell division cycle ATPase [Plasmodium vivax Sal-1]
 gi|148802352|gb|EDL43751.1| cell division cycle ATPase, putative [Plasmodium vivax]
          Length = 1089

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 348/591 (58%), Gaps = 51/591 (8%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            LGG+ K+   ++++I +         S+G+   KGVL+HG PGTGKTS+A+  A++S   
Sbjct: 478  LGGMKKQLNKIRELIELPLKYPEIFISIGISAPKGVLMHGIPGTGKTSIAKAIANESNAY 537

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             + +NGPE++S++ GESEQ L ++F  AS+  P ++FIDE+D+IA  R     EL +R+V
Sbjct: 538  CYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSTNELEKRVV 597

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+ + + VLV+AATNRP+SI+PALRR GR DREIEI               V
Sbjct: 598  SQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEI--------------PV 643

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT--HGFVGADLAALCNEAALVCLRRYSK 649
            P    R EIL   L+  +   LD++V    +A   HG+VGADLA LC EAA+ C++ +  
Sbjct: 644  PDEQGRYEIL---LTKTKKMKLDADVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHVH 700

Query: 650  IQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSS 709
                 +           EG     L   +  R+ T           P  SD    + +SS
Sbjct: 701  FLDLDEEDFIAFMELSVEGER---LSGDEGRRSGTR----------PLLSDTRPPVTASS 747

Query: 710  LPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
             P RG   +I     N                 L ++   F+ A     PS++RE  +++
Sbjct: 748  PPPRGA-KKIPPYILN----------------KLTIKAKHFQHALNICNPSSLRERQVQI 790

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V WED+GG ++VK QL E + +P +++  + +  +    GIL++GPPGC KTL+A+A+
Sbjct: 791  PTVTWEDIGGMQDVKEQLKETILYPLEYKHLYAKFNSNYNKGILLYGPPGCGKTLLAKAI 850

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   NF++VKGPEL + W GESE  VR LF KARA +P IIFFDEID LA  R   ++
Sbjct: 851  ANECNANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NSNN 909

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
                SDRV++Q+L E+DG++++  + +IAATNRPD +D AL RPGR D+L+Y+  P+   
Sbjct: 910  NNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDYKS 969

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            R  IF+  L+  P S+DVN+ E+A  +EG +GADI+ +C+ A   AI+E +
Sbjct: 970  RCSIFKAILKNTPLSADVNLHEMAKRTEGFSGADITNLCQSAVNEAIKETI 1020



 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 100/229 (43%), Positives = 145/229 (63%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG ++   ++ E +E P K+ E F  IG   P G+LM G PG  KT +A+A+A+
Sbjct: 473  ITYEDLGGMKKQLNKIRELIELPLKYPEIFISIGISAPKGVLMHGIPGTGKTSIAKAIAN 532

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+      + GPE+ SK +GESE+ +R +F KA    P IIF DEID +A  R K ++  
Sbjct: 533  ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSTN-- 590

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             +  RV+SQLL  +DGL +  NV V+AATNRP+ IDPAL R GRFDR + +  P+E  R 
Sbjct: 591  ELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRY 650

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI     +K+   +DVN+R++A    G  GAD++ +C EAAI  I+E++
Sbjct: 651  EILLTKTKKMKLDADVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHV 699


>gi|68068217|ref|XP_676018.1| cell division cycle ATPase [Plasmodium berghei strain ANKA]
 gi|56495516|emb|CAH99651.1| cell division cycle ATPase, putative [Plasmodium berghei]
          Length = 932

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/596 (38%), Positives = 349/596 (58%), Gaps = 34/596 (5%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            LGG+ K+   ++++I +         S+G+   KGVL+HG PGTGKTS+A+  A++S   
Sbjct: 291  LGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAY 350

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             + +NGPE++S++ GESEQ L ++F  AS+  P ++FIDE+D+IA  R     EL +R+V
Sbjct: 351  CYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRNKSSNELEKRVV 410

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+ + + VLV+AATNRP+S++PALRR GR DREIEI               V
Sbjct: 411  SQLLTLMDGLKKNNNVLVLAATNRPNSLDPALRRFGRFDREIEI--------------PV 456

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT--HGFVGADLAALCNEAALVCLRRYSK 649
            P    R EIL   L+  +   LD +V    +A   HG+VGADLA LC EAA+ C++ +  
Sbjct: 457  PDEQGRYEIL---LTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIH 513

Query: 650  IQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSR-----DCLDSASPCTSDLPTS 704
                 +           +G++D    D+  S +   SS        L +     +   T 
Sbjct: 514  FLDLEEEDFIEFMKLSVDGNTDEN-NDNHKSEDTYRSSNFEGGVKSLKNVFKLGNKNRTE 572

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
              S +  +   +++  D F     D       S     L ++   F+ A     PS++RE
Sbjct: 573  QASQNDKI--NMNKSGDKF-----DQKTKKIPSYILNKLTIKAKHFQHALNICNPSSLRE 625

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
              +++P V W+D+GG + VK QL E + +P +++  + +  +    GIL++GPPGC KTL
Sbjct: 626  RQVQIPTVTWDDIGGMQYVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTL 685

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+A+A+E   NF++VKGPEL + W GESE  VR LF KARA +P IIFFDEID LA  R
Sbjct: 686  LAKAIANECNANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER 745

Query: 885  GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
               +     SDRV++Q+L E+DG++++  + +IAATNRPD +D AL RPGR D+L+Y+  
Sbjct: 746  NSNN-NNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISL 804

Query: 945  PNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            P+   R  IF+  L+  P + DV+I ++A  +EG +GADI+ +C+ A   AI+E +
Sbjct: 805  PDFKSRCSIFKAILKNTPLNKDVDINDMAKRTEGFSGADITNLCQSAVNEAIKETI 860



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 100/229 (43%), Positives = 144/229 (62%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG ++   ++ E +E P K+ E F  IG   P G+LM G PG  KT +A+A+A+
Sbjct: 286  INYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 345

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+      + GPE+ SK +GESE+ +R +F KA    P IIF DEID +A  R K S+  
Sbjct: 346  ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRNKSSN-- 403

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             +  RV+SQLL  +DGL +  NV V+AATNRP+ +DPAL R GRFDR + +  P+E  R 
Sbjct: 404  ELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSLDPALRRFGRFDREIEIPVPDEQGRY 463

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI     +K+    DVN+R++A    G  GAD++ +C EAAI  I+E++
Sbjct: 464  EILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHI 512


>gi|76802633|ref|YP_330728.1| AAA-type ATPase (transitional ATPase homolog) [Natronomonas pharaonis
            DSM 2160]
 gi|76558498|emb|CAI50090.1| AAA-type ATPase (CDC48 subfamily) [Natronomonas pharaonis DSM 2160]
          Length = 759

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 249/623 (39%), Positives = 347/623 (55%), Gaps = 109/623 (17%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 198  IGGLDSELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 257

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
               ++GPE++S+ YGESE+ L EVFD AS++APA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 258  FTDISGPEIMSKYYGESEEQLREVFDEASENAPAIVFIDEIDSIAPKRGETSGDVERRVV 317

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI               V
Sbjct: 318  AQLLSLMDGLEERGDVIVIGATNRVDAIDPALRRGGRFDREIEI--------------GV 363

Query: 592  PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
            P    R EIL     GM   L D  ++E  +  THGFVGADL +L  EAA+  LRR    
Sbjct: 364  PDKEGRKEILQVHTRGM--PLADGIDLEQYAENTHGFVGADLESLTKEAAMNSLRRIRP- 420

Query: 651  QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS-RDCLDSASPCTSDLPTSLLSSS 709
                          E +   D +  +   S  +TES  +D L   +P             
Sbjct: 421  --------------ELDLEQDEIEAEVLESMTVTESDFKDALKGVTPSA----------- 455

Query: 710  LPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
              +R    E+ D       D+ GG+              D  K+R++             
Sbjct: 456  --MREVFVEVPDT----TWDAVGGL--------------DDTKSRLR------------- 482

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
                               E ++WP ++ E FK++  +   G+L++GPPG  KTLMA+A+
Sbjct: 483  -------------------ETIQWPLEYPEVFKQMDMQAAKGVLLYGPPGTGKTLMAKAI 523

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NAP+++FFDEID +A  RG+   
Sbjct: 524  ANEAQSNFISIKGPELLNKYVGESEKGVREVFEKARSNAPTVVFFDEIDSIAGERGERMG 583

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V +RV+SQLL ELDGL +  +V VIA TNRPD ID ALLRPGR DR ++V  P+E  
Sbjct: 584  DSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHIHVPVPDEEA 643

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA------- 1002
            RE IF +H R  P + DV+I ELA  ++G  GADI  +CREA+++A  E +++       
Sbjct: 644  REAIFAVHTRNKPLADDVDISELAGRTDGYVGADIEAVCREASMAATREFIESVSPEEAA 703

Query: 1003 -----SRITMQHLKTAIRHVQPS 1020
                  RIT +H + A+  V PS
Sbjct: 704  QSVGNVRITAEHFEEALDEVGPS 726



 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 165/266 (62%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+AV
Sbjct: 191  PSVTYEDIGGLDSELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAV 250

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DEID +A  RG+ S 
Sbjct: 251  ANEIDAHFTDISGPEIMSKYYGESEEQLREVFDEASENAPAIVFIDEIDSIAPKRGETSG 310

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V  RV++QLL  +DGL +R +V VI ATNR D IDPAL R GRFDR + +G P++  
Sbjct: 311  --DVERRVVAQLLSLMDGLEERGDVIVIGATNRVDAIDPALRRGGRFDREIEIGVPDKEG 368

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R+EI ++H R +P +  +++ + A  + G  GAD+  + +EAA++++             
Sbjct: 369  RKEILQVHTRGMPLADGIDLEQYAENTHGFVGADLESLTKEAAMNSLRRIRPELDLEQDE 428

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L++  +T    K A++ V PS
Sbjct: 429  IEAEVLESMTVTESDFKDALKGVTPS 454


>gi|290976655|ref|XP_002671055.1| predicted protein [Naegleria gruberi]
 gi|284084620|gb|EFC38311.1| predicted protein [Naegleria gruberi]
          Length = 883

 Score =  418 bits (1074), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 252/658 (38%), Positives = 374/658 (56%), Gaps = 90/658 (13%)

Query: 393  PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDI--IISSSV--KSTLSSLGLRPTKGVL 448
            P   +E  N++       S +GG+     IL+DI  +I   +      S+LG+ P +G+L
Sbjct: 213  PKIIVETPNIR------FSDIGGIDN---ILQDIRELIEYPILHPEIYSTLGVEPPRGIL 263

Query: 449  LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
            LHGPPG GKT LA   A +  +    V+ PE+VS   GESE  + ++F  A  +AP+++F
Sbjct: 264  LHGPPGCGKTMLANAIAGELQIPFLKVSAPEIVSGMSGESEAKIRQIFRDAISNAPSIIF 323

Query: 509  IDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALR 564
            IDE+DAI   R +  +E+ +R+VA L+  +D +   +T G  V++I ATNRPDS++ ALR
Sbjct: 324  IDEIDAILSKRDNASKEMEKRIVAQLITCLDDLTLEKTGGKTVIIIGATNRPDSLDDALR 383

Query: 565  RPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME----HSLLDSEVEYL 620
            R GR DREI +               +P    R++IL+ L   ++    H   D   + +
Sbjct: 384  RAGRFDREISL--------------GIPDEKARMKILNILTRKLKLDGGHDTFD--FKTI 427

Query: 621  SMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCS 680
            +  T G+VGADL AL NEAA+  + R        D++  T    E +   D M  D+   
Sbjct: 428  AHNTPGYVGADLKALVNEAAIAAIHRIF-----GDIVFGT----EQQQGDDPMAVDT--- 475

Query: 681  RNITESSRDCLDSASPCTSDLPTSLLSSSLP----LRGTVSEIADNFHNGVSDSSGGMFM 736
                        +ASP T    TS +S   P     R  +SE   +    +++       
Sbjct: 476  ------------AASPTTP--VTSTVSHDSPEDIKRRNIISETLRSMKEPLTE------- 514

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
             ++   L +   DFEKA  KV+PSA RE    VP V W+D+G   EV+ +L  A+  P K
Sbjct: 515  -QQLANLYVTFNDFEKAIKKVQPSAKREGFATVPNVTWDDIGALEEVREELRMAIMEPIK 573

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            + + +K++G   P G+L++GPPGC KTL+A+A+++++G NF+++KGPEL +K+VGESE+A
Sbjct: 574  NPDHYKKLGLTAPAGVLLYGPPGCGKTLLAKAISNDSGANFISIKGPELLNKYVGESERA 633

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            VR +F++A A++P +IFFDE+D L   R  ES   S S+RV++QLL  +DGL  R  V V
Sbjct: 634  VRQVFSRAAASSPCVIFFDEMDALCPKRDNESSSQS-SERVVNQLLTAMDGLESRGMVFV 692

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
            IAATNRPD ID A+LRPGR D+LLYV  PNE +R  + +   RK P +SDVN+ E+A L 
Sbjct: 693  IAATNRPDMIDSAMLRPGRLDKLLYVKLPNEQERISVLKTIARKTPLASDVNLEEIAKLC 752

Query: 977  EGCTGADISLICREAAISAIEENLDASR--------------ITMQHLKTAIRHVQPS 1020
            E  +GAD++ + REAA S ++E+L   R              +T +H K A++ + PS
Sbjct: 753  ENFSGADLAALVREAATSCLKEHLLKGRSNTNTPNKAIGEMIVTREHFKIALKKIPPS 810


>gi|448460002|ref|ZP_21596922.1| ATPase AAA [Halorubrum lipolyticum DSM 21995]
 gi|445807720|gb|EMA57801.1| ATPase AAA [Halorubrum lipolyticum DSM 21995]
          Length = 755

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 252/651 (38%), Positives = 358/651 (54%), Gaps = 115/651 (17%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 194  IGGLDSELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAN 253

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              T++GPE++S+ YGESE+ L EVF+ AS+ +PA++F+DELD+IAP R+D G ++ +R+V
Sbjct: 254  FHTISGPEIMSKYYGESEEKLREVFEEASEESPAIIFMDELDSIAPKREDAGGDVERRVV 313

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIE+               V
Sbjct: 314  AQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEV--------------GV 359

Query: 592  PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
            P    R EIL      M   L+D  +++  +  THGFVGADL +L  E+A+  LRR    
Sbjct: 360  PDRDGRKEILQVHTRNM--PLVDEIDLDEYADNTHGFVGADLESLAKESAMHALRRIRP- 416

Query: 651  QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS-RDCLDSASPCTSDLPTSLLSSS 709
                          E +  SD +  D   S  +TES  ++ +    P             
Sbjct: 417  --------------EIDLESDEIDADVLNSIQVTESDFKEAMKGIEPSA----------- 451

Query: 710  LPLRGTVSEIADNFHNGVS-DSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
              LR    E+ D     VS D  GG+                E+ + ++R +        
Sbjct: 452  --LREVFVEVPD-----VSWDQVGGL----------------EETKERLRET-------- 480

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
               ++W                   P ++ E F+ +  +   G+LM+GPPG  KTL+A+A
Sbjct: 481  ---IQW-------------------PLEYPEVFEELDMQAAKGVLMYGPPGTGKTLLAKA 518

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+EA  NF+++KGPEL +K+VGESEK VR +F+KAR NAP+I+FFDEID +A  RGK S
Sbjct: 519  VANEAESNFISIKGPELLNKFVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNS 578

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V +RV+SQLL ELDGL    +V VIA TNRPD ID ALLRPGR DR ++V  P+E 
Sbjct: 579  GDSGVGERVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDED 638

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA------------I 996
             R +I  +H R  P + DV++  +A  +EG  GADI  + REA+++A            +
Sbjct: 639  ARRKILEVHTRDKPLADDVDLDAIARKTEGYVGADIEAVAREASMNASREFIGSVSREEV 698

Query: 997  EENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKFQRLVHSNAEAD 1043
             E++   R+TMQH + A+  V PS        Y+E+  +F+R     AE +
Sbjct: 699  GESVGNVRVTMQHFEDALDEVNPSVTPETRERYEEIEKQFRRSEVDRAETE 749



 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 162/266 (60%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG      Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 187  PDVTYEDIGGLDSELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAV 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   NF  + GPE+ SK+ GESE+ +R +F +A   +P+IIF DE+D +A  R  E  
Sbjct: 247  ANEIDANFHTISGPEIMSKYYGESEEKLREVFEEASEESPAIIFMDELDSIAPKR--EDA 304

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + VG P+   
Sbjct: 305  GGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEVGVPDRDG 364

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P   ++++ E A  + G  GAD+  + +E+A+ A+           + 
Sbjct: 365  RKEILQVHTRNMPLVDEIDLDEYADNTHGFVGADLESLAKESAMHALRRIRPEIDLESDE 424

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K A++ ++PS
Sbjct: 425  IDADVLNSIQVTESDFKEAMKGIEPS 450



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 146/257 (56%), Gaps = 20/257 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            ++GGL +    L++ I            L ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 465 DQVGGLEETKERLRETIQWPLEYPEVFEELDMQAAKGVLMYGPPGTGKTLLAKAVANEAE 524

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE-LS 527
            N  ++ GPE++++  GESE+ + EVF  A ++AP +VF DE+D+IA  R K+ G+  + 
Sbjct: 525 SNFISIKGPELLNKFVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNSGDSGVG 584

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 585 ERVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 632

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP    R +IL   +   +  L D  +++ ++  T G+VGAD+ A+  EA++   R 
Sbjct: 633 --PVPDEDARRKILE--VHTRDKPLADDVDLDAIARKTEGYVGADIEAVAREASMNASRE 688

Query: 647 YSKIQTSSDVLHSTGTL 663
           +    +  +V  S G +
Sbjct: 689 FIGSVSREEVGESVGNV 705


>gi|341614023|ref|ZP_08700892.1| cell division cycle protein [Citromicrobium sp. JLT1363]
          Length = 768

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 243/628 (38%), Positives = 344/628 (54%), Gaps = 98/628 (15%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG+S+    L++++ +        + LG+ P KGVLLHGPPGTGKT LA+  A++S   
Sbjct: 207  VGGISETIQQLREMVELPLRYPELFTRLGVDPPKGVLLHGPPGTGKTRLAQAVANESDAE 266

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPE++   YGESE+ L EVFD+A+Q+APA++FIDE+D+IAP R     E  +R+V
Sbjct: 267  FFAINGPEIMGSGYGESEKRLREVFDNANQNAPAIIFIDEIDSIAPKRDSVPGEAEKRLV 326

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL LMDG+     ++VIAATNRPD+I+ ALRRPGR DREI I               V
Sbjct: 327  AQLLTLMDGLESRANIVVIAATNRPDAIDEALRRPGRFDREIVI--------------GV 372

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL     GM       +++ L+  THGFVG         A +  L R + I 
Sbjct: 373  PDENGRREILAIHTRGMPLGE-GVDLKELAKVTHGFVG---------ADIAALAREAAI- 421

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
                                      D  R I                     L + ++P
Sbjct: 422  --------------------------DAVRRIMPQ----------------IDLDAQTIP 439

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
                 +E+ +N H G  D     F+S    ALK           +++PSAMREV+++VP 
Sbjct: 440  -----TEVLENLHVGRDD-----FLS----ALK-----------RIQPSAMREVMVQVPD 474

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V W D+GG  +   +L E +E P K++EAF R+G R   G L++GPPG  KTL+A+AVA 
Sbjct: 475  VGWSDLGGIDDAIEKLKEGIELPIKNREAFHRLGIRAAKGFLLYGPPGTGKTLLAKAVAK 534

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EA  NF+++K  +L SKW GESE+ +  +F +ARA +P +IF DEID L   RG  +   
Sbjct: 535  EADANFISMKSSDLLSKWYGESEQQIAKMFRRARAVSPCVIFIDEIDSLVPARGSGTMEP 594

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V+ RV++ +L E+DGL +  +V VI ATNRP  +DPALLRPGRFD L+YVG P+   RE
Sbjct: 595  QVTGRVVNTVLAEMDGLEELQSVVVIGATNRPTLVDPALLRPGRFDELVYVGTPDAKGRE 654

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE-NLDASRITMQHL 1010
            +I  IH   +P + DV++ +LA  +E  TGAD+  + R A + A+     D   +TM   
Sbjct: 655  QILGIHTGNMPLADDVSLSKLASETERFTGADLEDVVRRAGLVALHRAGTDVQEVTMGDF 714

Query: 1011 KTAIRH----VQPSEIHSYKELSAKFQR 1034
              A++     V P     YK++  + ++
Sbjct: 715  TEALKDSRASVTPKMEQEYKKMRGELKK 742



 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/290 (43%), Positives = 171/290 (58%), Gaps = 29/290 (10%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE+      P A R V      V ++DVGG  E   QL E VE P ++ E F R+G  P
Sbjct: 191  DFEE------PKAGRSV------VNYDDVGGISETIQQLREMVELPLRYPELFTRLGVDP 238

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+ GPPG  KT +A+AVA+E+   F A+ GPE+     GESEK +R +F  A  NA
Sbjct: 239  PKGVLLHGPPGTGKTRLAQAVANESDAEFFAINGPEIMGSGYGESEKRLREVFDNANQNA 298

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIF DEID +A  R  +S       R+++QLL  +DGL  R N+ VIAATNRPD ID 
Sbjct: 299  PAIIFIDEIDSIAPKR--DSVPGEAEKRLVAQLLTLMDGLESRANIVVIAATNRPDAIDE 356

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL RPGRFDR + +G P+E  R EI  IH R +P    V+++ELA ++ G  GADI+ + 
Sbjct: 357  ALRRPGRFDREIVIGVPDENGRREILAIHTRGMPLGEGVDLKELAKVTHGFVGADIAALA 416

Query: 989  REAAISAIEE-----NLDASRITMQHLK----------TAIRHVQPSEIH 1023
            REAAI A+       +LDA  I  + L+          +A++ +QPS + 
Sbjct: 417  REAAIDAVRRIMPQIDLDAQTIPTEVLENLHVGRDDFLSALKRIQPSAMR 466



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 127/239 (53%), Gaps = 18/239 (7%)

Query: 411 SKLGGLSKEYAILKD-IIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S LGG+      LK+ I +    +     LG+R  KG LL+GPPGTGKT LA+  A ++ 
Sbjct: 478 SDLGGIDDAIEKLKEGIELPIKNREAFHRLGIRAAKGFLLYGPPGTGKTLLAKAVAKEAD 537

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LS 527
            N  ++   +++S+ YGESEQ + ++F  A   +P V+FIDE+D++ PAR  G  E  ++
Sbjct: 538 ANFISMKSSDLLSKWYGESEQQIAKMFRRARAVSPCVIFIDEIDSLVPARGSGTMEPQVT 597

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            R+V T+L  MDG+     V+VI ATNRP  ++PAL RPGR D  + +            
Sbjct: 598 GRVVNTVLAEMDGLEELQSVVVIGATNRPTLVDPALLRPGRFDELVYV------------ 645

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
               P    R +IL  + +G      D  +  L+  T  F GADL  +   A LV L R
Sbjct: 646 --GTPDAKGREQIL-GIHTGNMPLADDVSLSKLASETERFTGADLEDVVRRAGLVALHR 701


>gi|448441271|ref|ZP_21589022.1| ATPase AAA [Halorubrum saccharovorum DSM 1137]
 gi|445689154|gb|ELZ41395.1| ATPase AAA [Halorubrum saccharovorum DSM 1137]
          Length = 755

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 259/653 (39%), Positives = 356/653 (54%), Gaps = 119/653 (18%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 194  IGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAN 253

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              T++GPE++S+ YGESE+ L EVF+ AS+ +PA++F+DELD+IAP R++ G ++ +R+V
Sbjct: 254  FHTISGPEIMSKYYGESEEKLREVFEEASEESPAIIFMDELDSIAPKREEAGGDVERRVV 313

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIE+               V
Sbjct: 314  AQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEV--------------GV 359

Query: 592  PSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            P    R EIL      M   E   LD   EY    THGFVGADL +L  E+A+  LRR  
Sbjct: 360  PDREGRKEILQVHTRNMPLVEEIDLD---EYAD-NTHGFVGADLESLAKESAMHALRRIR 415

Query: 649  KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS-RDCLDSASPCTSDLPTSLLS 707
                            E +  SD +  D   S  +TES  ++ +    P           
Sbjct: 416  P---------------EIDLESDEIDADVLNSIQVTESDFKEAMKGIEPSA--------- 451

Query: 708  SSLPLRGTVSEIADNFHNGVS-DSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVI 766
                LR    E+ D     VS D  GG+    +G   +L                 RE I
Sbjct: 452  ----LREVFVEVPD-----VSWDQVGGL----EGTKERL-----------------RETI 481

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
                  +W                +E+P    E F+ +      G+LM+GPPG  KTL+A
Sbjct: 482  ------QW---------------PLEYP----EVFEELDMEAAKGVLMYGPPGTGKTLLA 516

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA  NF+++KGPEL +K+VGESEK VR +F+KAR NAP+I+FFDEID +A  RGK
Sbjct: 517  KAVANEAESNFISIKGPELLNKFVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGK 576

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
             S    V +RV+SQLL ELDGL    +V VIA TNRPD ID ALLRPGR DR ++V  P+
Sbjct: 577  NSGDSGVGERVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPD 636

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA----------- 995
            E  R +I  +H R  P + DV++  +A  +EG  GADI  + REA+++A           
Sbjct: 637  EDARRKILEVHTRNKPLADDVDLDAIARKAEGYVGADIEAVAREASMNASREFIGSVSRE 696

Query: 996  -IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKFQRLVHSNAEAD 1043
             + E++   R+TMQH + A+  V PS        Y+E+  +FQR    +AE +
Sbjct: 697  EVTESVGNVRVTMQHFEDALDEVNPSVTPETRERYEEIEKQFQRSEVESAETE 749



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/268 (41%), Positives = 164/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+
Sbjct: 185  EGPDVTYEDIGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAK 244

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   NF  + GPE+ SK+ GESE+ +R +F +A   +P+IIF DE+D +A  R  E
Sbjct: 245  AVANEIDANFHTISGPEIMSKYYGESEEKLREVFEEASEESPAIIFMDELDSIAPKR--E 302

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + VG P+ 
Sbjct: 303  EAGGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEVGVPDR 362

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P   ++++ E A  + G  GAD+  + +E+A+ A+           
Sbjct: 363  EGRKEILQVHTRNMPLVEEIDLDEYADNTHGFVGADLESLAKESAMHALRRIRPEIDLES 422

Query: 998  ENLDAS-----RITMQHLKTAIRHVQPS 1020
            + +DA      ++T    K A++ ++PS
Sbjct: 423  DEIDADVLNSIQVTESDFKEAMKGIEPS 450


>gi|222480785|ref|YP_002567022.1| ATPase AAA [Halorubrum lacusprofundi ATCC 49239]
 gi|222453687|gb|ACM57952.1| AAA family ATPase, CDC48 subfamily [Halorubrum lacusprofundi ATCC
            49239]
          Length = 754

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 250/642 (38%), Positives = 355/642 (55%), Gaps = 115/642 (17%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 193  IGGLDNELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAN 252

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              T++GPE++S+ YGESE+ L EVF+ AS+ APA++F+DELD+IAP R++ G ++ +R+V
Sbjct: 253  FHTISGPEIMSKYYGESEEKLREVFEEASEEAPAIIFMDELDSIAPKREEAGGDVERRVV 312

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIE+               V
Sbjct: 313  AQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEV--------------GV 358

Query: 592  PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
            P    R EIL      M   L+D  +++  +  THGFVGADL +L  E+A+  LRR    
Sbjct: 359  PDRDGRKEILQVHTRNM--PLVDGIDLDEYAENTHGFVGADLESLAKESAMHALRRIRP- 415

Query: 651  QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS-RDCLDSASPCTSDLPTSLLSSS 709
                          E +  SD +  D   S  +TES  ++ +    P             
Sbjct: 416  --------------ELDLESDEIDADVLNSIQVTESDFKEAMKGIEPSA----------- 450

Query: 710  LPLRGTVSEIADNFHNGVS-DSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
              LR    E+ D     VS D  GG+                E  + ++R +        
Sbjct: 451  --LREVFVEVPD-----VSWDQVGGL----------------EDTKERLRET-------- 479

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
               ++W                +E+P    E F+ +  +   G+LM+GPPG  KTL+A+A
Sbjct: 480  ---IQW---------------PLEYP----EVFEELDMQAAKGVLMYGPPGTGKTLLAKA 517

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E+  NF+++KGPEL +K+VGESEK VR +F+KAR NAP+I+FFDEID +A  RGK S
Sbjct: 518  VANESESNFISIKGPELLNKFVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNS 577

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V +RV+SQLL ELDGL    +V VIA TNRPD ID ALLRPGR DR ++V  P+E 
Sbjct: 578  GDSGVGERVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEE 637

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA------------I 996
             R +I  +H R  P + DV++  +A  +EG  GADI  + REA+++A            +
Sbjct: 638  ARRKILEVHTRNKPLADDVDLDAIARKTEGYVGADIEAVTREASMNASRELIGSVSREEV 697

Query: 997  EENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKFQR 1034
             E++   R+TMQH + A+  V PS        Y+E+  +F+R
Sbjct: 698  GESVGNVRVTMQHFEDALDEVNPSVTPETRERYEEIEKQFRR 739



 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 112/266 (42%), Positives = 161/266 (60%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG      Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 186  PDVTYEDIGGLDNELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAV 245

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   NF  + GPE+ SK+ GESE+ +R +F +A   AP+IIF DE+D +A  R  E  
Sbjct: 246  ANEIDANFHTISGPEIMSKYYGESEEKLREVFEEASEEAPAIIFMDELDSIAPKR--EEA 303

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + VG P+   
Sbjct: 304  GGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEVGVPDRDG 363

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P    +++ E A  + G  GAD+  + +E+A+ A+           + 
Sbjct: 364  RKEILQVHTRNMPLVDGIDLDEYAENTHGFVGADLESLAKESAMHALRRIRPELDLESDE 423

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K A++ ++PS
Sbjct: 424  IDADVLNSIQVTESDFKEAMKGIEPS 449



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 143/256 (55%), Gaps = 20/256 (7%)

Query: 412 KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           ++GGL      L++ I            L ++  KGVL++GPPGTGKT LA+  A++S  
Sbjct: 465 QVGGLEDTKERLRETIQWPLEYPEVFEELDMQAAKGVLMYGPPGTGKTLLAKAVANESES 524

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE-LSQ 528
           N  ++ GPE++++  GESE+ + EVF  A ++AP +VF DE+D+IA  R K+ G+  + +
Sbjct: 525 NFISIKGPELLNKFVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNSGDSGVGE 584

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +             
Sbjct: 585 RVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------- 631

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
             VP    R +IL   +      L D  +++ ++  T G+VGAD+ A+  EA++   R  
Sbjct: 632 -PVPDEEARRKILE--VHTRNKPLADDVDLDAIARKTEGYVGADIEAVTREASMNASREL 688

Query: 648 SKIQTSSDVLHSTGTL 663
               +  +V  S G +
Sbjct: 689 IGSVSREEVGESVGNV 704


>gi|448463305|ref|ZP_21598083.1| ATPase AAA [Halorubrum kocurii JCM 14978]
 gi|445817300|gb|EMA67176.1| ATPase AAA [Halorubrum kocurii JCM 14978]
          Length = 755

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 253/651 (38%), Positives = 356/651 (54%), Gaps = 115/651 (17%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 194  IGGLDSELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAN 253

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              T++GPE++S+ YGESE+ L EVF+ AS  +PA++F+DELD+IAP R+D G ++ +R+V
Sbjct: 254  FHTISGPEIMSKYYGESEEKLREVFEEASDESPAIIFMDELDSIAPKREDAGGDVERRVV 313

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIE+               V
Sbjct: 314  AQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEV--------------GV 359

Query: 592  PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
            P    R EIL      M   L+D  +++  +  THGFVGADL +L  E+A+  LRR    
Sbjct: 360  PDRDGRKEILQVHTRNM--PLVDEIDLDEYADNTHGFVGADLESLAKESAMHALRRIRP- 416

Query: 651  QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS-RDCLDSASPCTSDLPTSLLSSS 709
                          E +  SD +  D   S  +TES  ++ +    P             
Sbjct: 417  --------------EIDLESDEIDADVLNSIQVTESDFKEAMKGIEPSA----------- 451

Query: 710  LPLRGTVSEIADNFHNGVS-DSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
              LR    E+ D     VS D  GG+                E  + ++R +        
Sbjct: 452  --LREVFVEVPD-----VSWDQVGGL----------------EDTKERLRET-------- 480

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
               ++W                +E+P    E F+ +  +   G+LM+GPPG  KTL+A+A
Sbjct: 481  ---IQW---------------PLEYP----EVFEELDMQAAKGVLMYGPPGTGKTLLAKA 518

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+EA  NF+++KGPEL +K+VGESEK VR +F+KAR NAP+I+FFDEID +A  RGK S
Sbjct: 519  VANEAESNFISIKGPELLNKFVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNS 578

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V +RV+SQLL ELDGL    +V VIA TNRPD ID ALLRPGR DR ++V  P+E 
Sbjct: 579  GDSGVGERVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDED 638

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA------------I 996
             R +I  +H R  P + DV++  +A  +EG  GADI  + REA+++A            +
Sbjct: 639  ARRKILEVHTRDKPLADDVDLDAIARKTEGYVGADIEAVAREASMNASREFIGSVSREEV 698

Query: 997  EENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKFQRLVHSNAEAD 1043
             E++   R+TMQH + A+  V PS        Y E+  +F+R     AE +
Sbjct: 699  GESVSNVRVTMQHFEDALDEVNPSVTPETRERYDEIEKQFRRSEVDRAETE 749



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/278 (41%), Positives = 167/278 (60%), Gaps = 17/278 (6%)

Query: 758  RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
            +PS   +   E P V +ED+GG      Q+ E +E P +H E FKR+G  PP G+L+ GP
Sbjct: 175  KPSGDGDGASEGPDVTYEDIGGLDSELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGP 234

Query: 818  PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
            PG  KTL+A+AVA+E   NF  + GPE+ SK+ GESE+ +R +F +A   +P+IIF DE+
Sbjct: 235  PGTGKTLIAKAVANEIDANFHTISGPEIMSKYYGESEEKLREVFEEASDESPAIIFMDEL 294

Query: 878  DGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
            D +A  R  E  G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFD
Sbjct: 295  DSIAPKR--EDAGGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFD 352

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            R + VG P+   R+EI ++H R +P   ++++ E A  + G  GAD+  + +E+A+ A+ 
Sbjct: 353  REIEVGVPDRDGRKEILQVHTRNMPLVDEIDLDEYADNTHGFVGADLESLAKESAMHALR 412

Query: 998  ----------ENLDAS-----RITMQHLKTAIRHVQPS 1020
                      + +DA      ++T    K A++ ++PS
Sbjct: 413  RIRPEIDLESDEIDADVLNSIQVTESDFKEAMKGIEPS 450



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 139/241 (57%), Gaps = 20/241 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            ++GGL      L++ I            L ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 465 DQVGGLEDTKERLRETIQWPLEYPEVFEELDMQAAKGVLMYGPPGTGKTLLAKAVANEAE 524

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE-LS 527
            N  ++ GPE++++  GESE+ + EVF  A ++AP +VF DE+D+IA  R K+ G+  + 
Sbjct: 525 SNFISIKGPELLNKFVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNSGDSGVG 584

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 585 ERVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 632

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP    R +IL   +   +  L D  +++ ++  T G+VGAD+ A+  EA++   R 
Sbjct: 633 --PVPDEDARRKILE--VHTRDKPLADDVDLDAIARKTEGYVGADIEAVAREASMNASRE 688

Query: 647 Y 647
           +
Sbjct: 689 F 689


>gi|448426364|ref|ZP_21583310.1| ATPase AAA [Halorubrum terrestre JCM 10247]
 gi|448452205|ref|ZP_21593188.1| ATPase AAA [Halorubrum litoreum JCM 13561]
 gi|448484452|ref|ZP_21606085.1| ATPase AAA [Halorubrum arcis JCM 13916]
 gi|448508427|ref|ZP_21615533.1| ATPase AAA [Halorubrum distributum JCM 9100]
 gi|448518010|ref|ZP_21617309.1| ATPase AAA [Halorubrum distributum JCM 10118]
 gi|445679855|gb|ELZ32315.1| ATPase AAA [Halorubrum terrestre JCM 10247]
 gi|445697493|gb|ELZ49557.1| ATPase AAA [Halorubrum distributum JCM 9100]
 gi|445705546|gb|ELZ57440.1| ATPase AAA [Halorubrum distributum JCM 10118]
 gi|445809472|gb|EMA59513.1| ATPase AAA [Halorubrum litoreum JCM 13561]
 gi|445819954|gb|EMA69786.1| ATPase AAA [Halorubrum arcis JCM 13916]
          Length = 755

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 252/649 (38%), Positives = 355/649 (54%), Gaps = 111/649 (17%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 194  IGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAN 253

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              T++GPE++S+ YGESE+ L EVF+ AS+ +P+++F+DELD+IAP R++ G ++ +R+V
Sbjct: 254  FHTISGPEIMSKYYGESEEQLREVFEEASEESPSIIFMDELDSIAPKREEAGGDVERRVV 313

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIE+               V
Sbjct: 314  AQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEV--------------GV 359

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL      M  +  D +++  +  THGFVGADL +L  E+A+  LRR     
Sbjct: 360  PDRDGRKEILQVHTRNMPLT-DDIDLDEYAENTHGFVGADLESLAKESAMHALRRIRP-- 416

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS-RDCLDSASPCTSDLPTSLLSSSL 710
                         E +  SD +  D   S  +TES  ++ +    P              
Sbjct: 417  -------------EIDLESDEIDADVLNSIQVTESDFKEAIKGIEPSA------------ 451

Query: 711  PLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVP 770
             LR    E+ D       D  GG+    +G   +L                 RE I    
Sbjct: 452  -LREVFVEVPDV----TWDDVGGL----EGTKERL-----------------RETI---- 481

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
              +W                +E+P    E F+ +  +   G+LM+GPPG  KTL+A+AVA
Sbjct: 482  --QW---------------PLEYP----EVFEELDMQAAKGVLMYGPPGTGKTLLAKAVA 520

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E+  NF+++KGPEL +K+VGESEK VR +F+KAR NAP+I+FFDEID +A  RGK S  
Sbjct: 521  NESESNFISIKGPELLNKYVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNSGD 580

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V +RV+SQLL ELDGL    +V VIA TNRPD ID ALLRPGR DR ++V  P+ET R
Sbjct: 581  SGVGERVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDETAR 640

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA------------IEE 998
              IF +H R  P + DV++  LA  +EG  GADI  + REA+++A            + E
Sbjct: 641  RRIFEVHTRNKPLADDVDLDALARKTEGYVGADIEAVAREASMNASREFIGSVTREEVGE 700

Query: 999  NLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKFQRLVHSNAEAD 1043
            ++   R+TMQH + A+  V PS        Y+E+  +F+R      EA+
Sbjct: 701  SVGNVRVTMQHFEEALSEVNPSVTPETRERYEEIEKQFRRSEVDRTEAE 749



 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 113/266 (42%), Positives = 163/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 187  PDVTYEDIGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAV 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   NF  + GPE+ SK+ GESE+ +R +F +A   +PSIIF DE+D +A  R  E  
Sbjct: 247  ANEIDANFHTISGPEIMSKYYGESEEQLREVFEEASEESPSIIFMDELDSIAPKR--EEA 304

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + VG P+   
Sbjct: 305  GGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEVGVPDRDG 364

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + D+++ E A  + G  GAD+  + +E+A+ A+           + 
Sbjct: 365  RKEILQVHTRNMPLTDDIDLDEYAENTHGFVGADLESLAKESAMHALRRIRPEIDLESDE 424

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K AI+ ++PS
Sbjct: 425  IDADVLNSIQVTESDFKEAIKGIEPS 450


>gi|298709433|emb|CBJ31339.1| similar to spermatogenesis associated factor SPAF [Ectocarpus
            siliculosus]
          Length = 1124

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 265/640 (41%), Positives = 355/640 (55%), Gaps = 66/640 (10%)

Query: 409  DISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
            D   +GGLS +   L++ I +  +    L   G+RP +GVLLHGPPGTGKT+LAR  A  
Sbjct: 540  DWGSVGGLSSQIQQLREAIELPLTSPDILRKYGVRPPRGVLLHGPPGTGKTTLARAAAKA 599

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
             G ++  VNG E++S+  GESE AL + F  AS+ AP ++  DE+D + P R     E  
Sbjct: 600  CGCHVIVVNGSELMSRFVGESEGALRQRFAEASRCAPCLIVFDEIDTLCPRRDQASSEAQ 659

Query: 528  QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            +R+V+T+L LMDGV               D+ E  +R P    RE+      +     N 
Sbjct: 660  RRVVSTMLALMDGV---------------DAQEQFVRCPSARRREV------VVIACTNR 698

Query: 588  PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            P A+  PA R               LDSEVE         +G   AA   E   V LR  
Sbjct: 699  PQAL-DPALR-----------RPGRLDSEVE---------IGVPDAAGRAEILEVLLRGV 737

Query: 648  SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLS 707
                T +D  +S G     EG        S  S  + E +     +     +DL   +  
Sbjct: 738  P--HTMADANNSPGG----EGGRGEANSKSGPSGEVKELA---ARTHGFVGADLQLLVKE 788

Query: 708  SSL-PLR--------GTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVR 758
            ++L  LR        G++S  A     GV +   G   S +G    L   DF  A   V 
Sbjct: 789  AALQALRRTRGGGNWGSISARAGCSDAGVEE---GESTSAEGLP-TLTAADFRAALPLVA 844

Query: 759  PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
            PS +REV +EVP VKW D+GG   VK  L E VEWP +H EAF R+G  PP G+L++GPP
Sbjct: 845  PSGLREVAVEVPSVKWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPP 904

Query: 819  GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
            GCSKTLMARA+A+E+G+NFLAVKGPEL SKW+GESE+A+++LF +ARA AP+IIFFDE+D
Sbjct: 905  GCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARAAAPTIIFFDEVD 964

Query: 879  GLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
             LA  R G    G   ++RV++QLL ELDG+     + V+AATNRPD IDPALLRPGR D
Sbjct: 965  ALACKRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLD 1024

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            RL+YV PP+   R EI R+ L K+PC+ DV    LA  +EG +GA++  +CREA+I A+E
Sbjct: 1025 RLVYVPPPDVLSRREILRLSLAKVPCAGDVEHEALARRTEGFSGAEVVALCREASICALE 1084

Query: 998  ENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVH 1037
            E+  A+++   HL  A+  ++P    +     A FQR V 
Sbjct: 1085 EDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQRGVR 1124


>gi|448503663|ref|ZP_21613292.1| ATPase AAA [Halorubrum coriense DSM 10284]
 gi|445691864|gb|ELZ44047.1| ATPase AAA [Halorubrum coriense DSM 10284]
          Length = 755

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 250/643 (38%), Positives = 349/643 (54%), Gaps = 117/643 (18%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 194  IGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAN 253

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              T++GPE++S+ YGESE+ L EVF+ AS+ +PA++F+DELD+IAP R++ G ++ +R+V
Sbjct: 254  FHTISGPEIMSKYYGESEEQLREVFEEASEESPAIIFMDELDSIAPKREEAGGDVERRVV 313

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIE+               V
Sbjct: 314  AQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEV--------------GV 359

Query: 592  PSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            P    R EIL      M   E   LD   E     THGFVGADL +L  E+A+  LRR  
Sbjct: 360  PDRDGRKEILQVHTRNMPLTEGIDLDEYAEN----THGFVGADLESLAKESAMHALRRIR 415

Query: 649  KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS-RDCLDSASPCTSDLPTSLLS 707
                            E +  SD +  D   S  +TES  ++ +    P           
Sbjct: 416  P---------------EIDLESDEIDADVLNSIQVTESDFKEAIKGIEPSA--------- 451

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
                LR    E+ D   N V    GG+  +++                      +RE I 
Sbjct: 452  ----LREVFVEVPDVSWNDV----GGLGDTKE---------------------RLRETI- 481

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
                 +W                +E+P    E F+ +  +   G+LM+GPPG  KTL+A+
Sbjct: 482  -----QW---------------PLEYP----EVFEELDMQAAKGVLMYGPPGTGKTLLAK 517

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+  NF+++KGPEL +K+VGESEK VR +F+KAR NAP+I+FFDEID +A  RGK 
Sbjct: 518  AVANESESNFISIKGPELLNKYVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKN 577

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            S    V +RV+SQLL ELDGL    +V V+A TNRPD ID ALLRPGR DR ++V  P+E
Sbjct: 578  SGDSGVGERVVSQLLTELDGLESLEDVVVVATTNRPDLIDSALLRPGRLDRHVHVPVPDE 637

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA------------ 995
              R  IF +H R  P + DV++  LA  +EG  GADI  + REA+++A            
Sbjct: 638  AARRRIFEVHTRNKPLADDVDLDALARKTEGYVGADIEAVAREASMNASREFIGSVTREE 697

Query: 996  IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKFQR 1034
            + E++   R+TM H + A+  V PS        Y+E+  +F+R
Sbjct: 698  VGESVGNVRVTMDHFEDALSEVNPSVTPETRERYEEIEKQFKR 740



 Score =  215 bits (548), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/268 (41%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+
Sbjct: 185  EGPDVTYEDIGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAK 244

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   NF  + GPE+ SK+ GESE+ +R +F +A   +P+IIF DE+D +A  R  E
Sbjct: 245  AVANEIDANFHTISGPEIMSKYYGESEEQLREVFEEASEESPAIIFMDELDSIAPKR--E 302

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + VG P+ 
Sbjct: 303  EAGGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEVGVPDR 362

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P +  +++ E A  + G  GAD+  + +E+A+ A+           
Sbjct: 363  DGRKEILQVHTRNMPLTEGIDLDEYAENTHGFVGADLESLAKESAMHALRRIRPEIDLES 422

Query: 998  ENLDAS-----RITMQHLKTAIRHVQPS 1020
            + +DA      ++T    K AI+ ++PS
Sbjct: 423  DEIDADVLNSIQVTESDFKEAIKGIEPS 450


>gi|212224243|ref|YP_002307479.1| CDC48/VCP [Thermococcus onnurineus NA1]
 gi|212009200|gb|ACJ16582.1| Hypothetical CDC48/VCP [Thermococcus onnurineus NA1]
          Length = 838

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 258/724 (35%), Positives = 382/724 (52%), Gaps = 122/724 (16%)

Query: 368  INHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII 427
            I + T+V + P   AV   +RE T+P    E              +GGLS     +++++
Sbjct: 186  ITYNTEVEVLP--QAVE--VREETIPEVTYE-------------DIGGLSDAIQKIREMV 228

Query: 428  -ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 486
             +          LG+ P KGVLL+GPPGTGKT LA+  A+++  +   +NGPE++S+ YG
Sbjct: 229  ELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKFYG 288

Query: 487  ESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG 546
            ESE+ L E+F  A ++AP+++FIDE+DAIAP R++   E+ +R+V+ LL LMDG+     
Sbjct: 289  ESEERLREIFKDAEENAPSIIFIDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKSRGK 348

Query: 547  VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS 606
            V+VIAATNRPD+++PALRRPGR DREIE+               VP    R EIL     
Sbjct: 349  VIVIAATNRPDALDPALRRPGRFDREIEV--------------GVPDKKGRKEILQIHTR 394

Query: 607  GMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEF 666
            GM    L+ + + +++                  L  LR   + +T              
Sbjct: 395  GMP---LEPDYDKVTV------------------LKVLRELLRKETFD------------ 421

Query: 667  EGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNG 726
            E     +++  + +++  E  +  L S S    ++ T L+   L       EIA+  H G
Sbjct: 422  EERLKRLIERVEEAKS-EEEIKKVLKSESEIYPEVRTRLIDRML------EEIAEKTH-G 473

Query: 727  VSDSSGGMFMSEKGCALKLELVDFEK---ARMKVRPSAMREVILEVPK------VKWEDV 777
               +       E    +   L++  K    + ++ P  ++E  L V K      +K  D 
Sbjct: 474  FVGADLAALAREAAMVVLRRLINEGKISPEQERIPPEVLQE--LRVKKADFYEALKMVDP 531

Query: 778  GGQREVKTQLMEAVEW-------------------PQKHQEAFKRIGTRPPTGILMFGPP 818
               REV  + M  V W                   P K+ +AF+R+G  PP G+L++GPP
Sbjct: 532  SALREVLIE-MPNVHWEDIGGLDEVKQELREAVEWPLKYPKAFQRLGIDPPRGVLLYGPP 590

Query: 819  GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
            G  KTL+A+AVA+E+  NF+ ++GPE+ SKWVGESEK +R +F KAR  AP++IF DEID
Sbjct: 591  GTGKTLLAKAVATESEANFIGIRGPEVLSKWVGESEKRIREIFRKARQAAPTVIFIDEID 650

Query: 879  GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDR 938
             +A  RG  SD   V+DR+++QLL E+DG+ +   V VIAATNRPD IDPALLRPGRFDR
Sbjct: 651  AIAPARG--SDMNRVTDRLINQLLTEMDGIEKNSGVVVIAATNRPDIIDPALLRPGRFDR 708

Query: 939  LLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE 998
            L+ V  P+E  R EI ++H R++P + DVN+RELA  +EG +GAD+  + REAA+ A+  
Sbjct: 709  LILVPAPDEKARLEILKVHTRRVPLAKDVNLRELAKKTEGYSGADLEALVREAALIAMRR 768

Query: 999  NLD----------------ASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEA 1042
             +                   R++ +  + A++ V+PS      E    F+    S AE 
Sbjct: 769  AISKLPTELIEEESEEFLEQLRVSKKDFEEALKKVRPSITPYMIEYYKNFEENRKSKAEK 828

Query: 1043 DESG 1046
               G
Sbjct: 829  TSRG 832


>gi|448475263|ref|ZP_21602981.1| ATPase AAA [Halorubrum aidingense JCM 13560]
 gi|445816734|gb|EMA66621.1| ATPase AAA [Halorubrum aidingense JCM 13560]
          Length = 758

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 247/643 (38%), Positives = 349/643 (54%), Gaps = 117/643 (18%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GGL  E   ++++I +          LG+ P +GVLLHGPPGTGKT +A+  A++   +
Sbjct: 197  IGGLDSELEQVREMIELPMRHPELFKRLGIDPPQGVLLHGPPGTGKTLIAKAVANEIDAS 256

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              T++GPE++S+ YGESE+ L +VF+ A+++APA+VF+DELD+IAP R++ G ++ +R+V
Sbjct: 257  FHTISGPEIMSKYYGESEEQLRDVFEEATENAPAIVFMDELDSIAPKREEAGGDVERRVV 316

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIE+               V
Sbjct: 317  AQLLSLMDGLEDRGEVVVIGATNRVDAIDPALRRGGRFDREIEV--------------GV 362

Query: 592  PSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            P    R EIL      M   E   LD   E     THGFVGADL +L  E+A+  LRR  
Sbjct: 363  PDRDGRKEILQVHTRNMPLVEEIDLDEYAEN----THGFVGADLESLAKESAMHALRRIR 418

Query: 649  KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS-RDCLDSASPCTSDLPTSLLS 707
                            E +  SD +  D   S  +TE+  ++ +    P           
Sbjct: 419  P---------------ELDLESDEIDADVLNSIQVTETDFKEAMKGIEPSA--------- 454

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
                LR    E+ D       D  GG+                E  + ++R +       
Sbjct: 455  ----LREVFVEVPDV----TWDQVGGL----------------EDTKERLRET------- 483

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
                ++W                +E+P    E F+ +  +   G+LM+GPPG  KTL+A+
Sbjct: 484  ----IQW---------------PLEYP----EVFEELDMQAAKGVLMYGPPGTGKTLLAK 520

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+EA  NF+++KGPEL +K+VGESEK VR +F+KAR NAP+I+FFDEID +A  RGK 
Sbjct: 521  AVANEAESNFISIKGPELLNKFVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKN 580

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            S    V +RV+SQLL ELDGL    +V VIA TNRPD ID ALLRPGR DR ++V  P+E
Sbjct: 581  SGDSGVGERVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDE 640

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA------------ 995
              R +I  +H R  P + DV++  +A  ++G  GADI  + REA+++A            
Sbjct: 641  EARRKILEVHTRNKPLADDVDLDAIARQTDGYVGADIEAVAREASMNASREFIGSVSREE 700

Query: 996  IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKFQR 1034
            I E++   R+TM H + A+  V PS        Y E+  +FQR
Sbjct: 701  IGESVGNVRVTMAHFEAALDEVNPSVTPETRERYAEIEKQFQR 743



 Score =  215 bits (548), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 111/268 (41%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            + P V +ED+GG      Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+
Sbjct: 188  DAPDVTYEDIGGLDSELEQVREMIELPMRHPELFKRLGIDPPQGVLLHGPPGTGKTLIAK 247

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DE+D +A  R  E
Sbjct: 248  AVANEIDASFHTISGPEIMSKYYGESEEQLRDVFEEATENAPAIVFMDELDSIAPKR--E 305

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G  V  RV++QLL  +DGL  R  V VI ATNR D IDPAL R GRFDR + VG P+ 
Sbjct: 306  EAGGDVERRVVAQLLSLMDGLEDRGEVVVIGATNRVDAIDPALRRGGRFDREIEVGVPDR 365

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P   ++++ E A  + G  GAD+  + +E+A+ A+           
Sbjct: 366  DGRKEILQVHTRNMPLVEEIDLDEYAENTHGFVGADLESLAKESAMHALRRIRPELDLES 425

Query: 998  ENLDAS-----RITMQHLKTAIRHVQPS 1020
            + +DA      ++T    K A++ ++PS
Sbjct: 426  DEIDADVLNSIQVTETDFKEAMKGIEPS 453



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 149/271 (54%), Gaps = 24/271 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            ++GGL      L++ I            L ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 468 DQVGGLEDTKERLRETIQWPLEYPEVFEELDMQAAKGVLMYGPPGTGKTLLAKAVANEAE 527

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE-LS 527
            N  ++ GPE++++  GESE+ + EVF  A ++AP +VF DE+D+IA  R K+ G+  + 
Sbjct: 528 SNFISIKGPELLNKFVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNSGDSGVG 587

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 588 ERVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 635

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP    R +IL   +      L D  +++ ++  T G+VGAD+ A+  EA++   R 
Sbjct: 636 --PVPDEEARRKILE--VHTRNKPLADDVDLDAIARQTDGYVGADIEAVAREASMNASRE 691

Query: 647 YSKIQTSSDVLHSTG----TLFEFEGHSDTM 673
           +    +  ++  S G    T+  FE   D +
Sbjct: 692 FIGSVSREEIGESVGNVRVTMAHFEAALDEV 722


>gi|348538491|ref|XP_003456724.1| PREDICTED: nuclear valosin-containing protein [Oreochromis niloticus]
          Length = 809

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 250/643 (38%), Positives = 353/643 (54%), Gaps = 92/643 (14%)

Query: 413  LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
            +GG  +    +  ++I          LG+ P +G LLHGPPG GKT LA+  A +  + +
Sbjct: 230  VGGNEETLVEVCKLLIHMRHPEVYQQLGMVPPRGFLLHGPPGCGKTLLAQAVAGEMHLPM 289

Query: 473  FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVA 532
              V+ PE+VS   GESEQ L E+FD    SAP ++FIDE+DAI P R+   +++ +R+VA
Sbjct: 290  LKVSAPELVSGVSGESEQKLRELFDLTVSSAPCILFIDEIDAITPKREVASKDMERRIVA 349

Query: 533  TLLNLMD---GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
             LL  MD    +  T  VLVI ATNRPDS++PALRR GR DREI +              
Sbjct: 350  QLLTCMDDLNSLAVTAQVLVIGATNRPDSLDPALRRAGRFDREICM-------------- 395

Query: 590  AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRY 647
             +P  A RL IL  L   ++   L  + +Y  +A  T G+VGADL ALC EAA+  + R 
Sbjct: 396  GIPDEAARLRILRTLCRKLK---LPEDFDYQQLARLTPGYVGADLMALCREAAMSAVNR- 451

Query: 648  SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLS 707
                           L E  G   +  Q          S+++ L S +P  +D+P   L 
Sbjct: 452  --------------VLLETRGPPHSQSQ---------TSAKEPLASGAPTLTDVPVLCLL 488

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
             S     T+SE                   E+   L + + DF+ +   V+PSA RE   
Sbjct: 489  KSTE---TLSE-------------------EQLAGLCILMSDFQLSLASVQPSAKREGFA 526

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
             VP V WEDVG  ++V+ +L  A+  P +  E F+ +G   P+G+L+ GPPGC KTL+A+
Sbjct: 527  TVPDVTWEDVGALQDVREELTMAILAPVRSPEQFRALGLSAPSGVLLAGPPGCGKTLLAK 586

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+GLNF++VKGPEL + +VGESE+AVR +F + R +AP +IFFDEID L   R   
Sbjct: 587  AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGH 646

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G SV  RV++QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ LYVG P  
Sbjct: 647  ESGASV--RVVNQLLTEMDGLESRRQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPP 704

Query: 948  TDREEIFRIHLR---KIPCSSDVNIRELAC--LSEGCTGADISLICREAAISAIEENLDA 1002
             DR  I R   +   +     DV++ E+A     +G +GAD++ + REA+++A+   L +
Sbjct: 705  ADRHTILRTITKGGTRPQLEQDVSLEEIALDKRCDGFSGADLTALVREASLNALRTYLKS 764

Query: 1003 S----------RITMQHLKTAIRHVQPSEIHSYKELSAKFQRL 1035
                       R++  + + A   V+PS       +SAK QR+
Sbjct: 765  QRHTHSSAADIRVSKHNFEDAFGKVRPS-------VSAKDQRI 800



 Score =  186 bits (473), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/241 (42%), Positives = 143/241 (59%), Gaps = 6/241 (2%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            L  P +K+EDVGG  E   ++ + +    +H E ++++G  PP G L+ GPPGC KTL+A
Sbjct: 220  LHYPTLKFEDVGGNEETLVEVCKLL-IHMRHPEVYQQLGMVPPRGFLLHGPPGCGKTLLA 278

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA E  L  L V  PEL S   GESE+ +R LF    ++AP I+F DEID +   R  
Sbjct: 279  QAVAGEMHLPMLKVSAPELVSGVSGESEQKLRELFDLTVSSAPCILFIDEIDAITPKR-- 336

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR + +G
Sbjct: 337  EVASKDMERRIVAQLLTCMDDLNSLAVTAQVLVIGATNRPDSLDPALRRAGRFDREICMG 396

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
             P+E  R  I R   RK+    D + ++LA L+ G  GAD+  +CREAA+SA+   L  +
Sbjct: 397  IPDEAARLRILRTLCRKLKLPEDFDYQQLARLTPGYVGADLMALCREAAMSAVNRVLLET 456

Query: 1004 R 1004
            R
Sbjct: 457  R 457


>gi|388581288|gb|EIM21597.1| AAA-domain-containing protein [Wallemia sebi CBS 633.66]
          Length = 704

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 248/648 (38%), Positives = 366/648 (56%), Gaps = 74/648 (11%)

Query: 410  ISKLGGLSKEYA-ILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGG+S+    +L+ + +  S        G++P +GVLLHGPPG GKT LA   A + 
Sbjct: 100  LADLGGVSECVERMLELVAMPLSHPEVYLHTGVQPPRGVLLHGPPGCGKTLLANAIAGEM 159

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV   +++ P VVS   GESE+ + + F+ A QSAP ++FIDE+DAI P R++   E+ +
Sbjct: 160  GVPFLSISAPSVVSGMSGESEKTIRDTFEDAIQSAPCLLFIDEIDAITPKRENAQREMER 219

Query: 529  RMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  +D +   +TD   V++I ATNRPDS++PALRR GR D EI +         
Sbjct: 220  RIVAQLLTCIDDISWDKTDNKPVIIIGATNRPDSLDPALRRAGRFDHEISM--------- 270

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VP    R +IL  L   ++ S  D + +YL+ AT G+VGADL+AL   A ++ +
Sbjct: 271  -----GVPDDKSREQILKVLCGRLKLSG-DFDFKYLAKATPGYVGADLSALTGAAGVIAV 324

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
            +R  K     +       + + EG ++                    D      S L T 
Sbjct: 325  KRIFKQLADDNQDSQMSEVGQLEGQAE--------------------DQVEGQMSSLQT- 363

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
             L++ LP   T++    N  N +S++       E+   L +E  DFEKA   V+PS+ RE
Sbjct: 364  -LAAHLPKESTIAHFLLNHPNPLSETQ-----LER---LAIEAQDFEKALKVVQPSSKRE 414

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
                VP V W D+G   E++ +L  A+  P +H E F  +G   P G+L++GPPGC KTL
Sbjct: 415  GFATVPDVTWGDIGALHEIRDELHMAIVQPIRHPELFAVVGINAPCGVLLWGPPGCGKTL 474

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E+  NF++VKGPEL +K+VGESE+A+R +F +ARA++P +IFFDE+D L   R
Sbjct: 475  LAKAVANESRANFISVKGPELLNKYVGESERAIRQVFNRARASSPCVIFFDELDALVPRR 534

Query: 885  GKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
                D +S S  RV++ LL ELDGL  R  V VI ATNRPD IDPA++RPGR D+LLYV 
Sbjct: 535  ---DDNLSESSARVVNTLLTELDGLESRKQVFVIGATNRPDIIDPAMVRPGRLDKLLYVD 591

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSE--------GCTGADISLICREAAISA 995
             P+  +R ++ R    K P    +N +E+  + E        G +GAD++ + RE+A+ A
Sbjct: 592  LPSAEERVQVVRTLSSKTP----INEKEMDIVCEVIQSEKCSGFSGADLASLVRESAVVA 647

Query: 996  IEENL--DASRITMQ--HLKTAIRHVQP----SEIHSYKELSAKFQRL 1035
            + E+L  + S + ++  H   A+  V P    S++  Y  L AK   L
Sbjct: 648  LRESLVNETSNVVIESRHFLKALEKVTPSVSISQVKKYDNLRAKLMGL 695



 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 92/253 (36%), Positives = 142/253 (56%), Gaps = 8/253 (3%)

Query: 751 EKARMKVRP--SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
           E +  + RP  S+ + V    P  +  D+GG  E   +++E V  P  H E +   G +P
Sbjct: 75  EVSTKRARPTTSSHKNVDKTPPTARLADLGGVSECVERMLELVAMPLSHPEVYLHTGVQP 134

Query: 809 PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
           P G+L+ GPPGC KTL+A A+A E G+ FL++  P + S   GESEK +R  F  A  +A
Sbjct: 135 PRGVLLHGPPGCGKTLLANAIAGEMGVPFLSISAPSVVSGMSGESEKTIRDTFEDAIQSA 194

Query: 869 PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLH----QRVNVTVIAATNRPD 924
           P ++F DEID +   R  E+    +  R+++QLL  +D +         V +I ATNRPD
Sbjct: 195 PCLLFIDEIDAITPKR--ENAQREMERRIVAQLLTCIDDISWDKTDNKPVIIIGATNRPD 252

Query: 925 KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
            +DPAL R GRFD  + +G P++  RE+I ++   ++  S D + + LA  + G  GAD+
Sbjct: 253 SLDPALRRAGRFDHEISMGVPDDKSREQILKVLCGRLKLSGDFDFKYLAKATPGYVGADL 312

Query: 985 SLICREAAISAIE 997
           S +   A + A++
Sbjct: 313 SALTGAAGVIAVK 325


>gi|167382107|ref|XP_001735975.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165901776|gb|EDR27788.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 622

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/615 (38%), Positives = 345/615 (56%), Gaps = 78/615 (12%)

Query: 392 LPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLH 450
           LP ++IE +      E    K+GG+ K    +++++    +   +   LG+ P +G+LLH
Sbjct: 26  LPESKIEVKKGTFGYE----KIGGIDKIITEVRELVEYPLLHPEIYKHLGIEPPRGILLH 81

Query: 451 GPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFID 510
           GPPG GKT LA+  A + GV    V+  E+V    GESE  + ++F SASQ APA++FID
Sbjct: 82  GPPGCGKTLLAKAIAGEVGVAFIEVSATELVGGMSGESESKIRDLFQSASQRAPALLFID 141

Query: 511 ELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG-VLVIAATNRPDSIEPALRRPGRL 569
           E+DAI P R +   E+ +R+VA LL+ +D +   D  V+VI ATNRPDS++PALRR GR 
Sbjct: 142 EIDAITPKRDNAQREMERRIVAQLLSSLDKLSEADKPVIVIGATNRPDSLDPALRRAGRF 201

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGF 627
           DREI +               +PS AQR +IL  ++  ++   +DS V  E L+  T G+
Sbjct: 202 DREIAM--------------GIPSEAQRKQILDKMMVNLK---IDSAVNIEKLAKGTAGY 244

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS 687
           VGAD+AAL  EAA+  + R    +  +D L S     E E   D   + + C        
Sbjct: 245 VGADIAALTKEAAIAAIHRIFSGKAGTDNLKSIQQDVEEENQKDLNERQAVC-------- 296

Query: 688 RDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLEL 747
            D L S +                                       F   +   L +  
Sbjct: 297 -DYLKSNT-------------------------------------NTFTETELAQLSITQ 318

Query: 748 VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            DF+ A   V+PS+ RE    +P V W+++GG  EV  +L   V    ++   +K+ G  
Sbjct: 319 SDFDHALNVVQPSSKREGFTTIPDVTWDNIGGMEEVHNELKRLVVGAVQYPSLYKKFGVD 378

Query: 808 PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
            P GIL++GPPGC KT  A+A+A+E   NF+AVKGP+L +K+VGE+E+AVR LF +AR +
Sbjct: 379 TPAGILLYGPPGCGKTYCAKALANECKANFIAVKGPQLLNKYVGEAERAVRQLFMRARNS 438

Query: 868 APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
           AP +IFFDE+D LA  R ++S GVS   R+++QLL ELDG+  R +V V+AATNRPD ID
Sbjct: 439 APCVIFFDELDALAPKRSEDSSGVS---RIVNQLLTELDGMDVRKDVFVVAATNRPDCID 495

Query: 928 PALLRPGRFDRLLYVGPPNETDREEIFRI--HLRKIPCSSDVNIRELA--CLSEGCTGAD 983
           PA+LRPGR DRL+ V  PN   R +I +     +K+P +  VN+ ++A     +G +GAD
Sbjct: 496 PAMLRPGRLDRLISVDLPNSDARVDILKTICKRQKVPLADSVNLEKIARSVQVDGFSGAD 555

Query: 984 ISLICREAAISAIEE 998
           ++ + +EA++ A++E
Sbjct: 556 LTALVKEASVRALDE 570


>gi|91079282|ref|XP_972572.1| PREDICTED: similar to Nuclear valosin-containing protein-like
            (Nuclear VCP-like protein) (NVLp) [Tribolium castaneum]
          Length = 822

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 239/627 (38%), Positives = 358/627 (57%), Gaps = 64/627 (10%)

Query: 413  LGGLSKEYAILKDI---IISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            +GG+ K   IL+D+   +I          +G+ P +G LLHGPPG GKT LA   A + G
Sbjct: 211  IGGMDK---ILEDVCKLLIHVRHPEVYRQIGISPPRGFLLHGPPGCGKTLLANAIAGEIG 267

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            V L  V  PE+V+   GESE+ + E+F+ A  S P ++FIDE+DAI P R++  +E+ +R
Sbjct: 268  VPLLKVAAPELVAGVSGESEERIRELFERAIFSTPCILFIDEIDAITPNRQNAQKEMERR 327

Query: 530  MVATLLNLMDGVCRT---DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +VA LL+ +D + +    D VLVI ATNRPD+I+PALRR GR DREI +           
Sbjct: 328  IVAQLLSCLDDLSQNECGDRVLVIGATNRPDAIDPALRRAGRFDREICL----------- 376

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                +P    R++IL  L + ++ S  D + ++L+  T G+VGADL +L  EAA+  + R
Sbjct: 377  ---GIPDVQARVQILKVLTAKLKLSE-DFDYDFLAKHTPGYVGADLMSLTREAAMAAVNR 432

Query: 647  Y-SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
              +K++               E H   + Q+   S +   +     +  +P    +P  +
Sbjct: 433  MLNKLK---------------EQHKLEVKQNDTPSTSEAVNGHLLAEEKTPPEEPMPVDV 477

Query: 706  LSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREV 765
               + PL+  +  + D       + S      E          DF +A   V+PSA RE 
Sbjct: 478  EKQNNPLKDLMMWLHDKSPLSSEELSSLCITME----------DFNQALKCVQPSAKREG 527

Query: 766  ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
               VP V W+DVG    V+ +L  A+  P +H E FK +G   PTG+L+ GPPGC KTL+
Sbjct: 528  FATVPDVSWDDVGSLNSVREELQMAILAPIRHIEHFKELGLNTPTGVLLCGPPGCGKTLL 587

Query: 826  ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
            A+A+A+EAG+NF++VKGPEL + +VGESE+AVR  F +AR +AP +IFFDE+D +   R 
Sbjct: 588  AKAMANEAGINFISVKGPELLNMYVGESERAVRVCFERARNSAPCVIFFDELDAICPKRS 647

Query: 886  KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
               +G   + RV++Q+L E+DG+  R  V ++AA+NRPD +DPA+LRPGRFD++L+VG P
Sbjct: 648  DSREG-GATMRVVNQMLTEMDGVQDRQGVYLLAASNRPDIVDPAVLRPGRFDKILFVGLP 706

Query: 946  NETDREEIFRIHLR---KIPCSSDVNIRELACLSEGC---TGADISLICREAAISAIEEN 999
              +DR EI R   R   +   + DV++  +A  SE C   TGAD++ + +EA I A++E 
Sbjct: 707  TASDRIEILRAITRNGTRPRLAPDVDLEAIAS-SEQCRGYTGADLAALVKEAGIVALKEF 765

Query: 1000 L---DASR---ITMQHLKTAIRHVQPS 1020
            +   D  +   + M+H   AI  ++PS
Sbjct: 766  MLCGDTQKSLVVNMEHFTRAIAKIRPS 792


>gi|332027158|gb|EGI67251.1| Nuclear valosin-containing protein-like protein [Acromyrmex
            echinatior]
          Length = 942

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 251/635 (39%), Positives = 361/635 (56%), Gaps = 51/635 (8%)

Query: 436  LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               LG+ P +G LLHGPPG GKT LA   A +  + L  V GPE+V+   GESE  + E+
Sbjct: 303  FKQLGISPPRGFLLHGPPGCGKTLLAHAVAGELNIPLIKVAGPELVTGVSGESEARIREL 362

Query: 496  FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC---RTDGVLVIAA 552
            F+ A   AP ++F+DE+DA+ P R     E+ +R+VA LL+ +D +      D VLVI A
Sbjct: 363  FEQALILAPCIIFLDEIDAVTPHRATAQREMERRIVAQLLSSLDELNLNENGDRVLVIGA 422

Query: 553  TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
            TNRPDS++PALRR GR DRE+ +               +P    R +IL       E  +
Sbjct: 423  TNRPDSLDPALRRAGRFDREVCL--------------GIPDREARAKILAV---HTEKVV 465

Query: 613  LDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHS 670
            L   V   ++A  T GFVGADL AL  EAA+V + R  +    S        + E E   
Sbjct: 466  LAPNVSLSTIASLTPGFVGADLVALIREAAMVAVDRVFEDLNRSKQEERLPEVTEAEKQP 525

Query: 671  DTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL-LSSSLPLRGTVSEIA--DNFHNGV 727
            D  ++ S+ S N+ ++S       +  ++ +  +L     LP + ++SEIA  D      
Sbjct: 526  DKEIEISENSENLIDTSVAARSPTTTTSTTIENNLTFPQKLP-KSSISEIAEMDVIQEHS 584

Query: 728  SDSSGGM--------FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG 779
            +D S  +           E+   L +E  DFE A   V+PSA RE    VP V W+DVG 
Sbjct: 585  ADLSTLLTWLRSEPPLSQERLSTLCIEHSDFETALRIVQPSAKREGFATVPDVTWDDVGS 644

Query: 780  QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLA 839
             R ++ +L  A+  P KH E F  +G    +G+L+ GPPGC KTL+A+AVA+EAG+NF++
Sbjct: 645  LRNIRQELQMAILAPVKHSEHFNTLGLTAASGVLLCGPPGCGKTLLAKAVANEAGINFIS 704

Query: 840  VKGPEL-----FSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS 894
            VKGPEL     F+ +VGESEKAVR  F +AR + P +IFFDEID L   R  E D  S +
Sbjct: 705  VKGPELLNMASFNIYVGESEKAVRQCFLRARNSMPCVIFFDEIDALCPKR-TEGDN-SAT 762

Query: 895  DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIF 954
             RV++Q+L E+DG+  R  V ++AA+NRPD ID A+LRPGR D++LYVG PN +DR +I 
Sbjct: 763  ARVVNQMLTEMDGVESRQGVFLMAASNRPDIIDTAVLRPGRLDKILYVGLPNASDRVDIL 822

Query: 955  RIHLR---KIPCSSDVNIRELACLSE--GCTGADISLICREAAISAIEENLDA---SRIT 1006
            R   +   +   +SDV++ ++A  +   G TGAD++ + REA + A++E +       I+
Sbjct: 823  RAVTKNATRPKLASDVDLNQVAYDNRCNGYTGADLAALIREAGMEALKEIIAGYGQPEIS 882

Query: 1007 MQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAE 1041
            M+H+  A   +QPS+I  Y++LS  +   V  N+E
Sbjct: 883  MRHIFQAFDKMQPSDIKHYEKLSKLYS--VRKNSE 915


>gi|412993600|emb|CCO14111.1| predicted protein [Bathycoccus prasinos]
          Length = 841

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 240/650 (36%), Positives = 362/650 (55%), Gaps = 109/650 (16%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG+ K+ A +++++ +         ++G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 227  VGGVRKQMAQIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 286

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPE++S+  GESE  L + F+ A +++PA++FIDE+D+IAP R     E+ +R+V
Sbjct: 287  FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEVDSIAPKRDKTNGEVERRIV 346

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+     ++V+AATNRP+SI+PALRR GR DREI+I               V
Sbjct: 347  SQLLTLMDGLKARSHIIVMAATNRPNSIDPALRRFGRFDREIDI--------------GV 392

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
            P    RLE++      M+   LD EV  E ++  THGFVGADLAALC EAAL C+R    
Sbjct: 393  PDEVGRLEVMRIHTKNMK---LDEEVDLEVVAKDTHGFVGADLAALCTEAALQCIRE--- 446

Query: 650  IQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSS 709
                 DV+                L+D +    I       LDS +       T+L  ++
Sbjct: 447  ---KMDVID---------------LEDDEIDAEI-------LDSMAISNDHFKTALAQTN 481

Query: 710  -LPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
               LR TV E+     N   D  GG           LE V                    
Sbjct: 482  PSALRETVVEVP----NVSWDDVGG-----------LETV-------------------- 506

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
                       ++E++  +   VE P+K    F++ G  P  G+L +GPPGC KTL+A+A
Sbjct: 507  -----------KQELQETVQYPVEHPEK----FEKFGMAPSKGVLFYGPPGCGKTLLAKA 551

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+E   NF+++KGPEL + W GESE  VR +F KAR +AP ++FFDE+D +A  RG  +
Sbjct: 552  IANECQANFISIKGPELLTMWFGESESNVREVFDKARQSAPCVLFFDELDSIANQRGSSA 611

Query: 889  -DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             D    +DRV++QLL E+DG++ +  V +I ATNRPD ID AL+RPGR D+L+Y+  P++
Sbjct: 612  GDAGGAADRVLNQLLTEMDGMNSKKTVFIIGATNRPDIIDTALMRPGRLDQLIYIPLPDD 671

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA----IEENLDAS 1003
              R  IF+ +LRK P ++DV++  LA  + G +GADI+ IC+ A   A    IE++++  
Sbjct: 672  KSRISIFKANLRKSPIANDVDVETLAKFTHGYSGADITEICQRACKYAIRESIEKDIERE 731

Query: 1004 RITMQHLKTAIRHVQPSEIHSYKELS-AKFQRLV----HSNAEADESGYQ 1048
            R   Q  + A+   + + +    E++ A F+  +     S ++AD   YQ
Sbjct: 732  RAMAQKPEGAMEEDEENYVDPVPEITKAHFEEAMKYARRSVSDADIRKYQ 781



 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 117/265 (44%), Positives = 164/265 (61%), Gaps = 17/265 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 221  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVA 280

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K ++G
Sbjct: 281  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEVDSIAPKRDK-TNG 339

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R ++ V+AATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 340  -EVERRIVSQLLTLMDGLKARSHIIVMAATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 398

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN----------- 999
             E+ RIH + +    +V++  +A  + G  GAD++ +C EAA+  I E            
Sbjct: 399  LEVMRIHTKNMKLDEEVDLEVVAKDTHGFVGADLAALCTEAALQCIREKMDVIDLEDDEI 458

Query: 1000 ----LDASRITMQHLKTAIRHVQPS 1020
                LD+  I+  H KTA+    PS
Sbjct: 459  DAEILDSMAISNDHFKTALAQTNPS 483


>gi|389749535|gb|EIM90706.1| AAA-domain-containing protein [Stereum hirsutum FP-91666 SS1]
          Length = 785

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 250/613 (40%), Positives = 346/613 (56%), Gaps = 71/613 (11%)

Query: 410  ISKLGGLSKEY-AILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGGLS     +L+ + +  S        G++P +GVLLHGPPG GKT LAR    + 
Sbjct: 107  LSDLGGLSPIIEKMLELVAMPLSHPEIYLWTGVQPPRGVLLHGPPGCGKTMLARAIGGEL 166

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV    V+ P +VS   GESE+ L E F+ A + AP ++FIDE+DAI P R+    E+ +
Sbjct: 167  GVPFIQVSAPSIVSGMSGESEKTLRETFEEAKRVAPCLLFIDEIDAITPKRESAQREMER 226

Query: 529  RMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA  L  MD +   +T+   V+VI ATNRPD+++ ALRR GR D EI +         
Sbjct: 227  RIVAQFLTCMDELSWDKTENKPVIVIGATNRPDALDAALRRAGRFDHEISM--------- 277

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALV 642
                  VP    R +IL  L S +    L+ + ++  L+ AT G+VGADL AL   A ++
Sbjct: 278  -----GVPDDEGRAQILKVLCSKLR---LEGDFDFTALAKATPGYVGADLTALTGAAGII 329

Query: 643  CLRRYSKIQTSSDVLHSTGTLFEFEGHSD--TMLQDSDCSRNIT------ESSRDCLDSA 694
             ++R                   F G SD   ++ + D S  +T       +++   D+ 
Sbjct: 330  AVKRI------------------FRGISDGSIVIPEVDPSEGVTAEGVTSTTTKTPNDNT 371

Query: 695  SPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKAR 754
            S   S L T    S+LP   T S IA   H   S          +   L L   DF  A 
Sbjct: 372  SAPFSTLLTLPTLSNLP---TASSIAHFLHTHPSP-----LTPLQLTPLHLTSSDFHLAL 423

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
             +++PS++RE    VP V W D+G  + ++++L  AV  P +  E F+R+G   P G+LM
Sbjct: 424  SQIQPSSLREGFTTVPNVSWSDIGALQGIRSELHMAVVQPIRRPEVFRRVGIEAPCGVLM 483

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPGC KTL+A+AVASE+G NF++VKGPEL +K+VGESE+AVR +F++ARA+AP IIFF
Sbjct: 484  WGPPGCGKTLLAKAVASESGANFVSVKGPELLNKYVGESERAVRQVFSRARASAPCIIFF 543

Query: 875  DEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRP 933
            DE+D L   R    D +S S  RV++ LL ELDGL  R  V V+AATNRPD IDPA+ RP
Sbjct: 544  DELDALVPRR---DDSLSESSARVVNTLLTELDGLDSRRGVFVLAATNRPDMIDPAMCRP 600

Query: 934  GRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN------IRELACLSEGCTGADISLI 987
            GR D+LLYV  P   +R EI R  LRK+P  S+        IRE     EG +GAD++ +
Sbjct: 601  GRLDKLLYVDLPGAEERVEIVRTMLRKVPLRSETQREVERVIRERG---EGYSGADLAAV 657

Query: 988  CREAAISAIEENL 1000
             REA + A+ + L
Sbjct: 658  VREAGVLALRKTL 670



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 160/313 (51%), Gaps = 14/313 (4%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P  +  D+GG   +  +++E V  P  H E +   G +PP G+L+ GPPGC KT++ARA+
Sbjct: 103  PSTRLSDLGGLSPIIEKMLELVAMPLSHPEIYLWTGVQPPRGVLLHGPPGCGKTMLARAI 162

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
              E G+ F+ V  P + S   GESEK +R  F +A+  AP ++F DEID +   R  ES 
Sbjct: 163  GGELGVPFIQVSAPSIVSGMSGESEKTLRETFEEAKRVAPCLLFIDEIDAITPKR--ESA 220

Query: 890  GVSVSDRVMSQLLVELDGLH----QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
               +  R+++Q L  +D L     +   V VI ATNRPD +D AL R GRFD  + +G P
Sbjct: 221  QREMERRIVAQFLTCMDELSWDKTENKPVIVIGATNRPDALDAALRRAGRFDHEISMGVP 280

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI 1005
            ++  R +I ++   K+    D +   LA  + G  GAD++ +   A I A++        
Sbjct: 281  DDEGRAQILKVLCSKLRLEGDFDFTALAKATPGYVGADLTALTGAAGIIAVKRIFRG--- 337

Query: 1006 TMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMWTLIKS 1065
             +      I  V PSE  + + +++   +  + N  A  S     P+    SN+ T   S
Sbjct: 338  -ISDGSIVIPEVDPSEGVTAEGVTSTTTKTPNDNTSAPFSTLLTLPTL---SNLPT-ASS 392

Query: 1066 ISLFLCRFPAGLS 1078
            I+ FL   P+ L+
Sbjct: 393  IAHFLHTHPSPLT 405


>gi|443707184|gb|ELU02896.1| hypothetical protein CAPTEDRAFT_169679 [Capitella teleta]
          Length = 652

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 242/664 (36%), Positives = 368/664 (55%), Gaps = 49/664 (7%)

Query: 400  QNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTS 459
            Q  Q+TV+   + LGG+      +  +++          LG+ P +G LLHGPPG GKT 
Sbjct: 10   QVTQSTVK--FADLGGIDSTLKEVCKLLVHMKHPEVYEQLGVTPPRGFLLHGPPGCGKTL 67

Query: 460  LARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR 519
            LA   A +  +    +   E+VS   GESE+ L  VF++A  SAP ++F+DE+D+I P R
Sbjct: 68   LAHAIAGELELPFIKMAATEIVSGVSGESEEKLRSVFENAMSSAPCILFLDEIDSITPKR 127

Query: 520  KDGGEELSQRMVATLLNLMDGVCR--TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
            +   +++ +R+V+ LL+ MD +    +  VLVI ATNRPDSI+PALRR GR DREI +  
Sbjct: 128  ETASKDMERRIVSQLLSCMDDLSSKISAHVLVIGATNRPDSIDPALRRAGRFDREISM-- 185

Query: 578  SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAAL 635
                         +P+ A R  IL  L   ++   +  + +YL +A  T G+VGADL AL
Sbjct: 186  ------------GIPNEAARQRILEVLCRSLK---VGPDFDYLGLAHLTPGYVGADLMAL 230

Query: 636  CNEAALVCLRRYSKIQTSSDVLHSTGTL-------FEFEGHSDTMLQDSDCSRNITESSR 688
              EAA+  + R  K    S+    + +           EG  + + ++     N     +
Sbjct: 231  VREAAITAVNRAFKSLQESEAFSKSSSEKVTSVPPVAVEGPLEAISEEESAKENGETVEK 290

Query: 689  DCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC-ALKLEL 747
                  +     +   +  +            + + + +S   G   ++++   AL + +
Sbjct: 291  GTAAKEAVAEEAVAMEISDAPSQEPPQEPPKEEGYQSVLSWLKGSAPLNQEQLEALFITI 350

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
             DFE+A   V+PSA RE    VP V W+D+G   +++ +L  A+  P KH+E FK +G  
Sbjct: 351  SDFERALKHVQPSAKREGFATVPDVTWDDIGALHKIREELQMAILAPVKHREQFKSLGLN 410

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
             P GIL+ GPPGC KTL+A+AVA+E+G+NF++VKGPEL + +VGESE+AVR +F +AR +
Sbjct: 411  NPPGILLAGPPGCGKTLLAKAVANESGVNFISVKGPELLNMYVGESERAVRQVFQRARNS 470

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            +P +IFFDE+D L   R    +G S S RV++QLL E+DGL +R NV ++ ATNRPD +D
Sbjct: 471  SPCVIFFDELDALCPRRSDSGEGGS-SVRVVNQLLTEMDGLEERKNVFIMGATNRPDIVD 529

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELACLSEGC---TG 981
            PA+LRPGR D+ LYVG P   DR +I R   +   K    SDV + ++A   E C   TG
Sbjct: 530  PAVLRPGRLDKTLYVGLPTAADRFDILRTITKNGTKPLLGSDVILEDIAN-KESCSFYTG 588

Query: 982  ADISLICREAAISAIEE------NLDASRITMQHLKTAIRHVQPS----EIHSYKELSAK 1031
            AD++ + REA++SA+ E       +    +  +H + A+  V+PS    +   Y ++ A+
Sbjct: 589  ADLAALVREASVSALREFFSSKDQIKTITVHQRHFERALERVRPSVSAKDQVVYDKMKAR 648

Query: 1032 FQRL 1035
            FQ L
Sbjct: 649  FQVL 652


>gi|407034780|gb|EKE37391.1| ATPase, AAA family protein [Entamoeba nuttalli P19]
          Length = 622

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 232/615 (37%), Positives = 345/615 (56%), Gaps = 78/615 (12%)

Query: 392 LPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLH 450
           LP ++IE +      E    K+GG+ K    +++++    +   +   LG+ P +G+LLH
Sbjct: 26  LPESKIEVKKGTFGYE----KIGGIDKIITEVRELVEYPLLHPEIYKHLGIEPPRGILLH 81

Query: 451 GPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFID 510
           GPPG GKT LA+  A + GV    V+  E+V    GESE  + ++F  ASQ APA++FID
Sbjct: 82  GPPGCGKTLLAKAIAGEVGVAFIEVSATELVGGMSGESESKIRDLFQLASQRAPALLFID 141

Query: 511 ELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG-VLVIAATNRPDSIEPALRRPGRL 569
           E+DAI P R +   E+ +R+VA LL+ +D +   D  V+VI ATNRPDS++PALRR GR 
Sbjct: 142 EIDAITPKRDNAQREMERRIVAQLLSSLDKLSEADKPVIVIGATNRPDSLDPALRRAGRF 201

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGF 627
           DREI +               +PS +QR +IL  ++  ++   +DS V  E L+  T G+
Sbjct: 202 DREIAL--------------GIPSESQRRQILDKMMVNLK---IDSAVNIEKLAKGTAGY 244

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS 687
           VGAD+ AL  EAA+  + R    +  +D L S     E E  +D   + + C        
Sbjct: 245 VGADIVALTKEAAIAAIHRIFSGKAGADNLKSIQQDVEEENQNDLTERQAVC-------- 296

Query: 688 RDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLEL 747
            D L S++                                       F   +   L +  
Sbjct: 297 -DYLKSST-------------------------------------NTFTETELAQLSITQ 318

Query: 748 VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            DF+ A   V+PS+ RE    +P V W+++GG  EV  +L   V    ++   +K+ G  
Sbjct: 319 SDFDHALNVVQPSSKREGFTTIPDVTWDNIGGMEEVHNELKRLVVGAVQYPSLYKKFGVD 378

Query: 808 PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
            P GIL++GPPGC KT  A+A+A+E   NF+AVKGP+L +K+VGE+E+AVR LF +AR +
Sbjct: 379 TPAGILLYGPPGCGKTYCAKALANECKANFIAVKGPQLLNKYVGEAERAVRQLFMRARNS 438

Query: 868 APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
           AP +IFFDE+D LA  R ++S GVS   R+++QLL ELDG+  R +V V+AATNRPD ID
Sbjct: 439 APCVIFFDELDALAPKRSEDSSGVS---RIVNQLLTELDGMDVRKDVFVVAATNRPDCID 495

Query: 928 PALLRPGRFDRLLYVGPPNETDREEIFRI--HLRKIPCSSDVNIRELA--CLSEGCTGAD 983
           PA+LRPGR DRL+ V  PN   R +I +     +K+P +  VN+ ++A     +G +GAD
Sbjct: 496 PAMLRPGRLDRLISVDLPNRDARVDILKTICKRQKVPLADSVNLEKIARSAQVDGFSGAD 555

Query: 984 ISLICREAAISAIEE 998
           ++ + +EA++ A++E
Sbjct: 556 LTALVKEASVRALDE 570


>gi|67469139|ref|XP_650561.1| ATPase, AAA family protein [Entamoeba histolytica HM-1:IMSS]
 gi|56467200|gb|EAL45175.1| ATPase, AAA family protein [Entamoeba histolytica HM-1:IMSS]
 gi|449708369|gb|EMD47845.1| atpase AAA family protein [Entamoeba histolytica KU27]
          Length = 622

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 232/615 (37%), Positives = 344/615 (55%), Gaps = 78/615 (12%)

Query: 392 LPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLH 450
           LP ++IE +      E    K+GG+ K    +++++    +   +   LG+ P +G+LLH
Sbjct: 26  LPESKIEVKKGTFGYE----KIGGIDKIITEVRELVEYPLLHPEIYKHLGIEPPRGILLH 81

Query: 451 GPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFID 510
           GPPG GKT LA+  A + GV    V+  E+V    GESE  + ++F  ASQ APA++FID
Sbjct: 82  GPPGCGKTLLAKAIAGEVGVAFIEVSATELVGGMSGESESKIRDLFQLASQRAPALLFID 141

Query: 511 ELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG-VLVIAATNRPDSIEPALRRPGRL 569
           E+DAI P R +   E+ +R+VA LL+ +D +   D  V+VI ATNRPDS++PALRR GR 
Sbjct: 142 EIDAITPKRDNAQREMERRIVAQLLSSLDKLSEADKPVIVIGATNRPDSLDPALRRAGRF 201

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGF 627
           DREI +               +PS +QR +IL  ++  ++   +DS V  E L+  T G+
Sbjct: 202 DREIAL--------------GIPSESQRRQILDKMMVNLK---IDSAVNIEKLAKGTAGY 244

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS 687
           VGAD+ AL  EAA+  + R    +  +D L S     E E   D   + + C        
Sbjct: 245 VGADIVALTKEAAIAAIHRIFSGKAGADNLKSIQQDVEEENQKDLTERQAVC-------- 296

Query: 688 RDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLEL 747
            D L S++                                       F   +   L +  
Sbjct: 297 -DYLKSST-------------------------------------NTFTETELAQLSITQ 318

Query: 748 VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            DF+ A   V+PS+ RE    +P V W+++GG  EV  +L   V    ++   +K+ G  
Sbjct: 319 SDFDHALNVVQPSSKREGFTTIPDVTWDNIGGMEEVHNELKRLVVGAVQYPSLYKKFGVD 378

Query: 808 PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
            P GIL++GPPGC KT  A+A+A+E   NF+AVKGP+L +K+VGE+E+AVR LF +AR +
Sbjct: 379 TPAGILLYGPPGCGKTYCAKALANECKANFIAVKGPQLLNKYVGEAERAVRQLFMRARNS 438

Query: 868 APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
           AP +IFFDE+D LA  R ++S GVS   R+++QLL ELDG+  R +V V+AATNRPD ID
Sbjct: 439 APCVIFFDELDALAPKRSEDSSGVS---RIVNQLLTELDGMDVRKDVFVVAATNRPDCID 495

Query: 928 PALLRPGRFDRLLYVGPPNETDREEIFRI--HLRKIPCSSDVNIRELA--CLSEGCTGAD 983
           PA+LRPGR DRL+ V  PN   R +I +     +K+P +  VN+ ++A     +G +GAD
Sbjct: 496 PAMLRPGRLDRLISVDLPNSDARVDILKTICKRQKVPLADSVNLEKIARSAQVDGFSGAD 555

Query: 984 ISLICREAAISAIEE 998
           ++ + +EA++ A++E
Sbjct: 556 LTALVKEASVRALDE 570


>gi|301104184|ref|XP_002901177.1| ribosome biogenesis ATPase RIX7 [Phytophthora infestans T30-4]
 gi|262101111|gb|EEY59163.1| ribosome biogenesis ATPase RIX7 [Phytophthora infestans T30-4]
          Length = 771

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 241/603 (39%), Positives = 334/603 (55%), Gaps = 94/603 (15%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPGTGK+ LA   A + G     ++ PEVVS   GESEQ L E+FD 
Sbjct: 180  LGVEPPRGVLLHGPPGTGKSMLAHAIAGECGATFLKISAPEVVSGMSGESEQKLRELFDE 239

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATN 554
            A   AP+++FIDE+DAI P R+     + +R+VA LL   D +    T G  V++I ATN
Sbjct: 240  AISRAPSIIFIDEIDAITPKRETSARGMEKRIVAQLLTSTDSLSLENTGGKPVILIGATN 299

Query: 555  RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
            RPD+++ ALRR GR DREI +               +P    R +IL  L   M    L+
Sbjct: 300  RPDALDSALRRAGRFDREICL--------------GIPDEEAREKILRVLARKM---TLE 342

Query: 615  SEVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSD 671
             E ++ ++A  T G+VGADL +L  EAA+  + R ++ I  +SD            G SD
Sbjct: 343  GEFDFAALARRTPGYVGADLVSLTKEAAVGAVNRIFTNINATSDA-----------GTSD 391

Query: 672  TMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSS 731
                             D +++AS                        AD+    V    
Sbjct: 392  -----------------DAMEAAS-----------------------AADDLRAQVEP-- 409

Query: 732  GGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               F   +   L + + DF+ A  KV+PS+ RE    +P V W+D+G   EV+ +L  AV
Sbjct: 410  ---FTEAQLAPLSITMADFDAAIPKVQPSSKREGFATIPDVTWDDIGALNEVRDELSLAV 466

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P  H E F  +G   P G+L++GPPGC KTL+A+A+A E+G NF+++KGPEL  K+VG
Sbjct: 467  LQPIAHPERFAALGLSMPAGVLLYGPPGCGKTLLAKAIAHESGANFISIKGPELLDKYVG 526

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG----KESDGVSVSDRVMSQLLVELDG 907
            ESE++VR +F +ARA++P ++FFDE+D LA  R      ++ G  VS+RV++QLL E+DG
Sbjct: 527  ESERSVRQVFQRARASSPCVVFFDELDALAPRRSGGAGGDAGGNGVSERVVNQLLTEMDG 586

Query: 908  LHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDV 967
            L  R NV VIAATNRPD IDPA+LRPGR D+LLYV  P  ++R +I +    K   +S V
Sbjct: 587  LDIRRNVFVIAATNRPDIIDPAMLRPGRLDKLLYVPLPQASERHQILKTVSSKCAMASSV 646

Query: 968  NIRELAC--LSEGCTGADISLICREAAISAIEEN----LDAS----RITMQHLKTAIRHV 1017
             +  +A     EG +GAD+S + REA I+A+ E     LDA     RI   H  +A   V
Sbjct: 647  QLEAIAADPRCEGFSGADLSALVREAGITALRETDFSRLDAGAATLRIEHHHFISAFDRV 706

Query: 1018 QPS 1020
             PS
Sbjct: 707  FPS 709



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/238 (39%), Positives = 140/238 (58%), Gaps = 6/238 (2%)

Query: 763 REVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
           R  ++E P  ++ DVGG + +  ++ E +E+P  H E +  +G  PP G+L+ GPPG  K
Sbjct: 139 RGFVVERPSARYSDVGGIQSILQEVRELIEYPLTHPEVYAHLGVEPPRGVLLHGPPGTGK 198

Query: 823 TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
           +++A A+A E G  FL +  PE+ S   GESE+ +R LF +A + APSIIF DEID +  
Sbjct: 199 SMLAHAIAGECGATFLKISAPEVVSGMSGESEQKLRELFDEAISRAPSIIFIDEIDAITP 258

Query: 883 IRGKESDGVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDR 938
            R  E+    +  R+++QLL   D L         V +I ATNRPD +D AL R GRFDR
Sbjct: 259 KR--ETSARGMEKRIVAQLLTSTDSLSLENTGGKPVILIGATNRPDALDSALRRAGRFDR 316

Query: 939 LLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            + +G P+E  RE+I R+  RK+    + +   LA  + G  GAD+  + +EAA+ A+
Sbjct: 317 EICLGIPDEEAREKILRVLARKMTLEGEFDFAALARRTPGYVGADLVSLTKEAAVGAV 374



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/235 (40%), Positives = 135/235 (57%), Gaps = 29/235 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            ++LGL    GVLL+GPPG GKT LA+  AH+SG N  ++ GPE++ +  GESE+++ +V
Sbjct: 476 FAALGLSMPAGVLLYGPPGCGKTLLAKAIAHESGANFISIKGPELLDKYVGESERSVRQV 535

Query: 496 FDSASQSAPAVVFIDELDAIAPAR------KDGGEELSQRMVATLLNLMDGVCRTDGVLV 549
           F  A  S+P VVF DELDA+AP R        GG  +S+R+V  LL  MDG+     V V
Sbjct: 536 FQRARASSPCVVFFDELDALAPRRSGGAGGDAGGNGVSERVVNQLLTEMDGLDIRRNVFV 595

Query: 550 IAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME 609
           IAATNRPD I+PA+ RPGRLD+ + + +              P  ++R +IL  + S   
Sbjct: 596 IAATNRPDIIDPAMLRPGRLDKLLYVPL--------------PQASERHQILKTVSS--- 638

Query: 610 HSLLDSEVEYLSMAT----HGFVGADLAALCNEAALVCLRR--YSKIQTSSDVLH 658
              + S V+  ++A      GF GADL+AL  EA +  LR   +S++   +  L 
Sbjct: 639 KCAMASSVQLEAIAADPRCEGFSGADLSALVREAGITALRETDFSRLDAGAATLR 693


>gi|307206357|gb|EFN84409.1| Nuclear valosin-containing protein-like [Harpegnathos saltator]
          Length = 861

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 253/695 (36%), Positives = 379/695 (54%), Gaps = 72/695 (10%)

Query: 360  DHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKE 419
            D++S +FV+  +TK                 T+P  +++            S +GG  K 
Sbjct: 189  DNDSTSFVVTKKTK-----------------TIPITELKVT---------FSNVGGSEKV 222

Query: 420  YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPE 479
               +  ++           LG+ P +G LLHGPPG GKT LA   A +  + L  V  PE
Sbjct: 223  LKTVCTLLAHMKHPEIFKQLGISPPRGFLLHGPPGCGKTLLAHAVAGELNMPLLKVAAPE 282

Query: 480  VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD 539
            +++   GESE  + E+FD A    P VVF+DE+DAIAP R     E+ +R+VA LL+ +D
Sbjct: 283  LIAGVSGESEARIRELFDQALALVPCVVFLDEIDAIAPHRATAQREMERRIVAQLLSCLD 342

Query: 540  GVC---RTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ 596
             +      D VL+I ATNRPDS++PALRR GR DRE+ +               +P    
Sbjct: 343  ELNLKENGDRVLIIGATNRPDSLDPALRRAGRFDREVCL--------------GIPDREA 388

Query: 597  RLEILHALLSGMEHSLL--DSEVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKIQTS 653
            R +IL       E  +L  D ++  ++  T GFVGADL AL  EAA+V + R +  ++ S
Sbjct: 389  RAKILAV---HTEKVVLAPDVDLSMIASLTPGFVGADLVALIREAAMVAVDRVFEDLKKS 445

Query: 654  SDVLHSTGTLFEFE-GHSDTMLQDS----DCSRNITESSRDCLDSASPCTSDLPTSLLSS 708
                    T  + E G S    ++S    D   N+T+S  + LD     +S+ P      
Sbjct: 446  KAEEKLPETEVDKESGKSSETFENSGNLIDTGGNVTQSPVENLDLKE--SSEKPPDANKD 503

Query: 709  SLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
             +  +  +S++        ++        E+   L+++  DFE A   V+PSA RE    
Sbjct: 504  IIQKQPKISDLTSLLTWLRTEPP---LSPERLSTLRVKHSDFESALRVVQPSAKREGFAT 560

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V W D+G   +++ +L  A+  P ++ E F  +G   PTG+L+ GPPGC KTL+A+A
Sbjct: 561  VPDVTWNDIGSLHDIRRELQMAILAPVRYPEYFNALGLTAPTGVLLCGPPGCGKTLLAKA 620

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+EAG+NF++VKGPEL + +VGESEKAVR  F +AR +AP +IFFDE+D L   R  E+
Sbjct: 621  VANEAGINFISVKGPELLNMYVGESEKAVRQCFLRARNSAPCVIFFDELDALCPKR-TEN 679

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
            D  S + RV++Q+L E+DG+  R  V ++AA+NRPD IDPA+LRPGR D++LYV  PNE 
Sbjct: 680  DH-SATSRVVNQMLTEMDGVEGRQGVFLMAASNRPDIIDPAVLRPGRLDKILYVDLPNEP 738

Query: 949  DREEIFRIHLR---KIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL----D 1001
            +R +I R   +   +     DVN+ E+  +++G TGAD++ + REA + A++E +     
Sbjct: 739  ERIDILRALTKNETRPKLDEDVNLNEVGHVTKGFTGADLAALIREAGMEALKEAIANLVS 798

Query: 1002 ASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
              +I  +H   A+  VQPS    +I  Y++LS  +
Sbjct: 799  EPKICRRHFSLALVKVQPSVREKDIKHYEKLSKIY 833


>gi|301121234|ref|XP_002908344.1| ribosome biogenesis ATPase RIX7 [Phytophthora infestans T30-4]
 gi|262103375|gb|EEY61427.1| ribosome biogenesis ATPase RIX7 [Phytophthora infestans T30-4]
          Length = 800

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 248/633 (39%), Positives = 355/633 (56%), Gaps = 70/633 (11%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPGTGK+ LA   A + G     ++ PEVVS   GESEQ L E+FD 
Sbjct: 180  LGVEPPRGVLLHGPPGTGKSMLAHAIAGECGATFLKISAPEVVSGMSGESEQKLRELFDE 239

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATN 554
            A   AP+++FIDE+DAI P R+     + +R+VA LL   D +    T G  V++I ATN
Sbjct: 240  AISRAPSIIFIDEIDAITPKRETSARGMEKRIVAQLLTSTDSLSLENTGGKPVILIGATN 299

Query: 555  RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
            RPD+++ ALRR GR DREI +               +P    R +IL  L   M    L+
Sbjct: 300  RPDALDSALRRAGRFDREICL--------------GIPDEEAREKILRVLARKM---TLE 342

Query: 615  SEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDT 672
             E ++ ++A  T G+VGADL +L  EAA+  + R   I T+ + + +     E +  ++T
Sbjct: 343  GEFDFAALARRTPGYVGADLVSLTKEAAVGAVNR---IFTNINAVKTLAA--EVDVSAET 397

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
               D+  S +  E     ++     T+       S++  LR  V                
Sbjct: 398  ETSDAGTSDDAME-----VEKTQEKTAADSEEAASAADDLRAQVEP-------------- 438

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
              F   +   L + + DF+ A  KV+PS+ RE    +P V W+D+G   EV+ +L  AV 
Sbjct: 439  --FTEAQLAPLSITMADFDAAIPKVQPSSKREGFATIPDVTWDDIGALNEVRDELSLAVL 496

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P  H E F  +G   P G+L++GPPGC KTL+A+A+A E+G NF+++KGPEL  K+VGE
Sbjct: 497  QPIAHPERFAALGLSMPAGVLLYGPPGCGKTLLAKAIAHESGANFISIKGPELLDKYVGE 556

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG----KESDGVSVSDRVMSQLLVELDGL 908
            SE++VR +F +ARA++P ++FFDE+D LA  R      ++ G  VS+RV++QLL E+DGL
Sbjct: 557  SERSVRQVFQRARASSPCVVFFDELDALAPRRSGGAGGDAGGNGVSERVVNQLLTEMDGL 616

Query: 909  HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN 968
              R NV VIAATNRPD IDPA+LRPGR D+LLYV  P  ++R +I +    K   +S V 
Sbjct: 617  DIRRNVFVIAATNRPDIIDPAMLRPGRLDKLLYVPLPQASERHQILKTVSSKCAMASSVQ 676

Query: 969  IRELAC--LSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYK 1026
            +  +A     EG +GAD+S + REA I+A+ E  D SR+        I H      H + 
Sbjct: 677  LEAIAADPRCEGFSGADLSALVREAGITALRET-DFSRLDAGAATLGIEH------HHF- 728

Query: 1027 ELSAKFQRLVHSNAEADESGY-----QLRPSKS 1054
             +SA F R+  S + AD+  +      LR S+S
Sbjct: 729  -ISA-FDRVFPSVSRADQRMFDRMKKNLRKSRS 759



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/238 (39%), Positives = 140/238 (58%), Gaps = 6/238 (2%)

Query: 763 REVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
           R  ++E P  ++ DVGG + +  ++ E +E+P  H E +  +G  PP G+L+ GPPG  K
Sbjct: 139 RGFVVERPSARYSDVGGIQSILQEVRELIEYPLTHPEVYAHLGVEPPRGVLLHGPPGTGK 198

Query: 823 TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
           +++A A+A E G  FL +  PE+ S   GESE+ +R LF +A + APSIIF DEID +  
Sbjct: 199 SMLAHAIAGECGATFLKISAPEVVSGMSGESEQKLRELFDEAISRAPSIIFIDEIDAITP 258

Query: 883 IRGKESDGVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDR 938
            R  E+    +  R+++QLL   D L         V +I ATNRPD +D AL R GRFDR
Sbjct: 259 KR--ETSARGMEKRIVAQLLTSTDSLSLENTGGKPVILIGATNRPDALDSALRRAGRFDR 316

Query: 939 LLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            + +G P+E  RE+I R+  RK+    + +   LA  + G  GAD+  + +EAA+ A+
Sbjct: 317 EICLGIPDEEAREKILRVLARKMTLEGEFDFAALARRTPGYVGADLVSLTKEAAVGAV 374


>gi|270003538|gb|EEZ99985.1| hypothetical protein TcasGA2_TC002784 [Tribolium castaneum]
          Length = 876

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 242/666 (36%), Positives = 367/666 (55%), Gaps = 88/666 (13%)

Query: 413  LGGLSKEYAILKDI---IISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            +GG+ K   IL+D+   +I          +G+ P +G LLHGPPG GKT LA   A + G
Sbjct: 211  IGGMDK---ILEDVCKLLIHVRHPEVYRQIGISPPRGFLLHGPPGCGKTLLANAIAGEIG 267

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            V L  V  PE+V+   GESE+ + E+F+ A  S P ++FIDE+DAI P R++  +E+ +R
Sbjct: 268  VPLLKVAAPELVAGVSGESEERIRELFERAIFSTPCILFIDEIDAITPNRQNAQKEMERR 327

Query: 530  MVATLLNLMDGVCRT---DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +VA LL+ +D + +    D VLVI ATNRPD+I+PALRR GR DREI +           
Sbjct: 328  IVAQLLSCLDDLSQNECGDRVLVIGATNRPDAIDPALRRAGRFDREICL----------- 376

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                +P    R++IL  L + ++ S  D + ++L+  T G+VGADL +L  EAA+  + R
Sbjct: 377  ---GIPDVQARVQILKVLTAKLKLSE-DFDYDFLAKHTPGYVGADLMSLTREAAMAAVNR 432

Query: 647  Y----------------------------SKIQTSS------DVLHSTGTLFEFEGHSDT 672
                                         +K +T+       +++       E    S  
Sbjct: 433  MLNKLKEQHKLAQIVAAEKALEEKQKQETAKEETNEVNKSDPEIIVDDDPKTEPPKESPI 492

Query: 673  MLQDSDCSRNITESSRDCL------DSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNG 726
            ++ D +  +N T S+ + +      +  +P    +P  +   + PL+  +  + D     
Sbjct: 493  VVIDEEVKQNDTPSTSEAVNGHLLAEEKTPPEEPMPVDVEKQNNPLKDLMMWLHDKSPLS 552

Query: 727  VSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQ 786
              + S      E          DF +A   V+PSA RE    VP V W+DVG    V+ +
Sbjct: 553  SEELSSLCITME----------DFNQALKCVQPSAKREGFATVPDVSWDDVGSLNSVREE 602

Query: 787  LMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELF 846
            L  A+  P +H E FK +G   PTG+L+ GPPGC KTL+A+A+A+EAG+NF++VKGPEL 
Sbjct: 603  LQMAILAPIRHIEHFKELGLNTPTGVLLCGPPGCGKTLLAKAMANEAGINFISVKGPELL 662

Query: 847  SKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELD 906
            + +VGESE+AVR  F +AR +AP +IFFDE+D +   R    +G   + RV++Q+L E+D
Sbjct: 663  NMYVGESERAVRVCFERARNSAPCVIFFDELDAICPKRSDSREG-GATMRVVNQMLTEMD 721

Query: 907  GLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPC 963
            G+  R  V ++AA+NRPD +DPA+LRPGRFD++L+VG P  +DR EI R   R   +   
Sbjct: 722  GVQDRQGVYLLAASNRPDIVDPAVLRPGRFDKILFVGLPTASDRIEILRAITRNGTRPRL 781

Query: 964  SSDVNIRELACLSEGC---TGADISLICREAAISAIEENL---DASR---ITMQHLKTAI 1014
            + DV++  +A  SE C   TGAD++ + +EA I A++E +   D  +   + M+H   AI
Sbjct: 782  APDVDLEAIAS-SEQCRGYTGADLAALVKEAGIVALKEFMLCGDTQKSLVVNMEHFTRAI 840

Query: 1015 RHVQPS 1020
              ++PS
Sbjct: 841  AKIRPS 846



 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 174/323 (53%), Gaps = 14/323 (4%)

Query: 692  DSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG--MFMSEKGCALKLELVD 749
            DS +P  +D P++  S+S      +    +N ++   D++     +   K  A  + L  
Sbjct: 128  DSEAPAYNDKPSNGPSTSQKESQALPTYQNNTNSKKVDANKDRYQYFGRKRKAETVGLTP 187

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            ++    K +  A     L+ P V ++D+GG  ++   + + +    +H E +++IG  PP
Sbjct: 188  YQSTPKKKKSLA----TLQEPSVSFKDIGGMDKILEDVCKLL-IHVRHPEVYRQIGISPP 242

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G L+ GPPGC KTL+A A+A E G+  L V  PEL +   GESE+ +R LF +A  + P
Sbjct: 243  RGFLLHGPPGCGKTLLANAIAGEIGVPLLKVAAPELVAGVSGESEERIRELFERAIFSTP 302

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV---NVTVIAATNRPDKI 926
             I+F DEID +   R  ++    +  R+++QLL  LD L Q      V VI ATNRPD I
Sbjct: 303  CILFIDEIDAITPNR--QNAQKEMERRIVAQLLSCLDDLSQNECGDRVLVIGATNRPDAI 360

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            DPAL R GRFDR + +G P+   R +I ++   K+  S D +   LA  + G  GAD+  
Sbjct: 361  DPALRRAGRFDREICLGIPDVQARVQILKVLTAKLKLSEDFDYDFLAKHTPGYVGADLMS 420

Query: 987  ICREAAISAIEENLDASRITMQH 1009
            + REAA++A+   L+  ++  QH
Sbjct: 421  LTREAAMAAVNRMLN--KLKEQH 441


>gi|33468981|ref|NP_080447.1| nuclear valosin-containing protein-like [Mus musculus]
 gi|32699478|sp|Q9DBY8.1|NVL_MOUSE RecName: Full=Nuclear valosin-containing protein-like; Short=NVLp;
            Short=Nuclear VCP-like protein
 gi|12836020|dbj|BAB23464.1| unnamed protein product [Mus musculus]
 gi|74150277|dbj|BAE24409.1| unnamed protein product [Mus musculus]
 gi|148681184|gb|EDL13131.1| nuclear VCP-like [Mus musculus]
          Length = 855

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 241/601 (40%), Positives = 331/601 (55%), Gaps = 74/601 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+FD 
Sbjct: 292  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQ 351

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP +VFIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 352  AVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 411

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DRE+ +               +P  A R  IL  L   +    L  
Sbjct: 412  PDSLDPALRRAGRFDREVCL--------------GIPDEAARERILQTLCRKLR---LPE 454

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
               +  +A  T GFVGADL ALC EAA+  + R    Q +           E EG     
Sbjct: 455  TFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKP-----EIEGLPSEG 509

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
             Q+       T  ++D L             LL    PL                     
Sbjct: 510  DQEERLGAEPTSETQDELQRL--------LGLLRDQDPLS-------------------- 541

Query: 734  MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
                E+   L +EL DF  A  +V+PSA RE  + VP V W D+G   +++ +L+ A+  
Sbjct: 542  ---EEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILA 598

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P ++ + F+ +G   P GIL+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGES
Sbjct: 599  PVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            E+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  
Sbjct: 659  ERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLETRQQ 716

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIR 970
            V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P   DVN+ 
Sbjct: 717  VFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLE 776

Query: 971  ELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQP 1019
             +A  L   C TGAD++ + REA++ A+ + + A          +++ +H + A + V+P
Sbjct: 777  TIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKP 836

Query: 1020 S 1020
            S
Sbjct: 837  S 837



 Score =  186 bits (472), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/259 (41%), Positives = 148/259 (57%), Gaps = 14/259 (5%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
           L+ VD E   +  + +  R   L++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 234 LQEVDGEIEALLQKKAKARSTELQISNVKFEDVGGNDATLKEVCKMLIH-----MRHPEV 288

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
           ++ +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 289 YQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 348

Query: 861 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
           F +A +NAP I+F DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 349 FDQAVSNAPCIVFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 406

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      N   LA L+ 
Sbjct: 407 GATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTP 466

Query: 978 GCTGADISLICREAAISAI 996
           G  GAD+  +CREAA+ A+
Sbjct: 467 GFVGADLMALCREAAMCAV 485



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 140/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  +  E  ++  I+          +LGL    G+LL G
Sbjct: 564 PSAKREGFVTVPNVTWADIGALEDIRDE--LIMAILAPVRNPDQFRTLGLGTPAGILLAG 621

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 622 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 681

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 682 VDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDK 741

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGF 627
            + +               +P PA R+ IL  +        LD +V   ++A     + +
Sbjct: 742 TLFV--------------GLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCY 787

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL AL  EA+L  LR+
Sbjct: 788 TGADLTALVREASLCALRQ 806


>gi|21619335|gb|AAH31847.1| Nuclear VCP-like [Mus musculus]
          Length = 855

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 241/601 (40%), Positives = 331/601 (55%), Gaps = 74/601 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+FD 
Sbjct: 292  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQ 351

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP +VFIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 352  AVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 411

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DRE+ +               +P  A R  IL  L   +    L  
Sbjct: 412  PDSLDPALRRAGRFDREVCL--------------GIPDEAARERILQTLCRKLR---LPE 454

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
               +  +A  T GFVGADL ALC EAA+  + R    Q +           E EG     
Sbjct: 455  TFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKP-----EIEGLPSEG 509

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
             Q+       T  ++D L             LL    PL                     
Sbjct: 510  DQEKRLGAEPTSETQDELQRL--------LGLLRDQDPLS-------------------- 541

Query: 734  MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
                E+   L +EL DF  A  +V+PSA RE  + VP V W D+G   +++ +L+ A+  
Sbjct: 542  ---EEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILA 598

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P ++ + F+ +G   P GIL+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGES
Sbjct: 599  PVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            E+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  
Sbjct: 659  ERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLETRQQ 716

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIR 970
            V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P   DVN+ 
Sbjct: 717  VFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLE 776

Query: 971  ELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQP 1019
             +A  L   C TGAD++ + REA++ A+ + + A          +++ +H + A + V+P
Sbjct: 777  TIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKP 836

Query: 1020 S 1020
            S
Sbjct: 837  S 837



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/259 (41%), Positives = 148/259 (57%), Gaps = 14/259 (5%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
           L+ VD E   +  + +  R   L++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 234 LQEVDGEIEALLQKKAKARSTELQISNVKFEDVGGNDATLKEVCKMLIH-----MRHPEV 288

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
           ++ +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 289 YQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 348

Query: 861 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
           F +A +NAP I+F DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 349 FDQAVSNAPCIVFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 406

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      N   LA L+ 
Sbjct: 407 GATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTP 466

Query: 978 GCTGADISLICREAAISAI 996
           G  GAD+  +CREAA+ A+
Sbjct: 467 GFVGADLMALCREAAMCAV 485



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 140/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  +  E  ++  I+          +LGL    G+LL G
Sbjct: 564 PSAKREGFVTVPNVTWADIGALEDIRDE--LIMAILAPVRNPDQFRTLGLGTPAGILLAG 621

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 622 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 681

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 682 VDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDK 741

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGF 627
            + +               +P PA R+ IL  +        LD +V   ++A     + +
Sbjct: 742 TLFV--------------GLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCY 787

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL AL  EA+L  LR+
Sbjct: 788 TGADLTALVREASLCALRQ 806


>gi|340345795|ref|ZP_08668927.1| AAA family ATPase, CDC48 subfamily [Candidatus Nitrosoarchaeum
            koreensis MY1]
 gi|339520936|gb|EGP94659.1| AAA family ATPase, CDC48 subfamily [Candidatus Nitrosoarchaeum
            koreensis MY1]
          Length = 714

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 239/619 (38%), Positives = 337/619 (54%), Gaps = 106/619 (17%)

Query: 412  KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
            +LGGL  E   +++++ +          +G+   KGVLL+GPPGTGKT LA+  A ++  
Sbjct: 180  ELGGLKNEVRKIREMVELPMRHPELFEKIGVEAPKGVLLYGPPGTGKTLLAKAVAGETNA 239

Query: 471  NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM 530
            +  +++GPE++ + YGESE+ + E+F  A ++AP+++FIDE+D+IAP R +   E+ +R+
Sbjct: 240  HFISLSGPEIMGKYYGESEEKIREIFSQAEENAPSIIFIDEIDSIAPKRDEVSGEVEKRI 299

Query: 531  VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
            V+ LL LMDG+     V+VIAATNRPDSI+PALRRPGR DREIEI               
Sbjct: 300  VSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEI--------------G 345

Query: 591  VPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLRRYS 648
            +P    R +IL     GM    +D +V+   +S  THGFVGADL  L  EAA+  LRR  
Sbjct: 346  IPDTEGRFDILSIHTRGMP---IDEKVDLKQISKITHGFVGADLEVLSKEAAMRSLRR-- 400

Query: 649  KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSS 708
             I    D         + E  S  +LQ    +   +E  RD L    P            
Sbjct: 401  -ILPDID--------LDEEKISSEILQKIKIT---SEDFRDALKEVRPSA---------- 438

Query: 709  SLPLRGTVSEIADNFHNGVS-DSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
               LR    +I D     VS D  GG+                           ++E +L
Sbjct: 439  ---LREVQIQIPD-----VSWDDVGGL-------------------------DKLKEELL 465

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E   V+W                   P K++EAF  +    P GIL+ GPPG  KTL+A+
Sbjct: 466  EA--VEW-------------------PMKYKEAFDYVNVESPKGILLHGPPGTGKTLIAK 504

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            A+A     NF+++KGPEL SKWVGESEK VR +F KAR  AP IIF DE+D L   RG  
Sbjct: 505  ALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKARQAAPCIIFLDEVDALVPRRGSG 564

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
                 V++ V+SQ+L E+DGL +  NV +I ATNR D ID ALLRPGRFDR++ V  P+ 
Sbjct: 565  DSSSHVTENVVSQILTEIDGLEELHNVLIIGATNRLDIIDEALLRPGRFDRIIEVPTPDS 624

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------ENL 1000
              R+ IF IH +K P +SDV+I +L  L++G +GA+I+ +   AAI+A++       +N+
Sbjct: 625  KGRQHIFEIHTKKKPLASDVSIAKLVELTDGFSGAEIAAVANRAAITALKRYVSGKSKNV 684

Query: 1001 DASRITMQHLKTAIRHVQP 1019
               +I+ + L  +I  V+P
Sbjct: 685  KEIKISQEDLLDSINKVKP 703



 Score =  227 bits (578), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 111/276 (40%), Positives = 172/276 (62%), Gaps = 17/276 (6%)

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            S  + V   VP++ ++++GG +    ++ E VE P +H E F++IG   P G+L++GPPG
Sbjct: 164  SMTKAVDTNVPRITYDELGGLKNEVRKIREMVELPMRHPELFEKIGVEAPKGVLLYGPPG 223

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
              KTL+A+AVA E   +F+++ GPE+  K+ GESE+ +R +F++A  NAPSIIF DEID 
Sbjct: 224  TGKTLLAKAVAGETNAHFISLSGPEIMGKYYGESEEKIREIFSQAEENAPSIIFIDEIDS 283

Query: 880  LAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            +A  R + S    V  R++SQLL  +DG+  R  V VIAATNRPD IDPAL RPGRFDR 
Sbjct: 284  IAPKRDEVSG--EVEKRIVSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDRE 341

Query: 940  LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-- 997
            + +G P+   R +I  IH R +P    V++++++ ++ G  GAD+ ++ +EAA+ ++   
Sbjct: 342  IEIGIPDTEGRFDILSIHTRGMPIDEKVDLKQISKITHGFVGADLEVLSKEAAMRSLRRI 401

Query: 998  -------------ENLDASRITMQHLKTAIRHVQPS 1020
                         E L   +IT +  + A++ V+PS
Sbjct: 402  LPDIDLDEEKISSEILQKIKITSEDFRDALKEVRPS 437



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 141/268 (52%), Gaps = 28/268 (10%)

Query: 385 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSK-EYAILKDIIISSSVKSTLSSLGLRP 443
           K +R   L   QI+  +V          +GGL K +  +L+ +      K     + +  
Sbjct: 432 KEVRPSALREVQIQIPDVSW------DDVGGLDKLKEELLEAVEWPMKYKEAFDYVNVES 485

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
            KG+LLHGPPGTGKT +A+  A  +  N  ++ GPE++S+  GESE+ + E+F  A Q+A
Sbjct: 486 PKGILLHGPPGTGKTLIAKALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKARQAA 545

Query: 504 PAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           P ++F+DE+DA+ P R   D    +++ +V+ +L  +DG+     VL+I ATNR D I+ 
Sbjct: 546 PCIIFLDEVDALVPRRGSGDSSSHVTENVVSQILTEIDGLEELHNVLIIGATNRLDIIDE 605

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
           AL RPGR DR IE                VP+P  +    H      +   L S+V    
Sbjct: 606 ALLRPGRFDRIIE----------------VPTPDSKGR-QHIFEIHTKKKPLASDVSIAK 648

Query: 622 MA--THGFVGADLAALCNEAALVCLRRY 647
           +   T GF GA++AA+ N AA+  L+RY
Sbjct: 649 LVELTDGFSGAEIAAVANRAAITALKRY 676


>gi|325185486|emb|CCA19969.1| ribosome biogenesis ATPase RIX7 putative [Albugo laibachii Nc14]
          Length = 770

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 244/615 (39%), Positives = 346/615 (56%), Gaps = 86/615 (13%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +G+LLHGPPGTGKT LA   A +SG     ++ PE+VS   GESEQ + E+F  
Sbjct: 188  LGVEPPRGILLHGPPGTGKTMLANSIAGESGAAFIRISAPEIVSGMSGESEQKVRELFQE 247

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATN 554
            A ++APA+VFIDE+DAI P R+     + +R+VA LL  +D +    T G  VL+I ATN
Sbjct: 248  AVKNAPAIVFIDEIDAITPKRETVQRGMERRIVAQLLTSIDSLSLENTGGKPVLIIGATN 307

Query: 555  RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
            RPD+++ ALRR GR DREI +               +P    R+ IL  L   M    LD
Sbjct: 308  RPDALDSALRRAGRFDREICL--------------GIPDETARMSILQKLAGKMR---LD 350

Query: 615  SEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDT 672
               ++  +A  T G+VGADL +L  EAA++ + R                +F       T
Sbjct: 351  GAFDFQEIARKTPGYVGADLVSLTKEAAVIAVNR----------------IF------ST 388

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
            M+       +++E   D  D A+  TS    +    S         + D F + V+    
Sbjct: 389  MI-------SVSEPFNDSKDDANASTSAKDETPAGES---------VHDEFRSLVTP--- 429

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
              F   +   L++ + DF  A  KV+PS+ RE    +  V W DVG    V+ +L+ ++ 
Sbjct: 430  --FTPAQLEPLRINMADFLAAIQKVQPSSKREGFATISDVSWADVGALAAVRDELVVSIL 487

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P +H E F+ +G   P G+L++GPPGC KTL+A+A+A+E+  NF+++KGPEL  K+VGE
Sbjct: 488  HPIRHPERFQALGLEMPAGVLLYGPPGCGKTLLAKAIANESEANFISIKGPELLDKYVGE 547

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIR----GKESDGVSVSDRVMSQLLVELDGL 908
            SE+AVR +F +ARA++P +IFFDE+D L   R    G +S G SV++RV++QLL E+DGL
Sbjct: 548  SERAVRQVFQRARASSPCVIFFDELDALCPRRSNGMGYDS-GNSVTERVVNQLLTEMDGL 606

Query: 909  HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN 968
              R NV VIAATNRPD IDPA+LRPGR D+LLYV  P   DR  I +   R+  C  D +
Sbjct: 607  DSRKNVFVIAATNRPDIIDPAMLRPGRLDKLLYVPLPVPEDRLSILQTVTRR--CRLDPS 664

Query: 969  IRELACLS--------EGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            I    CLS        +G +GADIS + REA ++A+  + D   +   HL  A  H Q +
Sbjct: 665  I----CLSSIALDQRCDGFSGADISALVREAGLAAL-RDADLHALDPCHLCIAQAHFQQA 719

Query: 1021 EIHSYKELSAKFQRL 1035
             +H +  +S   QR+
Sbjct: 720  FVHVFPSVSRSNQRM 734



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/235 (38%), Positives = 137/235 (58%), Gaps = 6/235 (2%)

Query: 766 ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
           ++E P+ ++ D GG   +  ++ E +E+P  H E +  +G  PP GIL+ GPPG  KT++
Sbjct: 150 LVERPRTRYSDFGGIHSILQEVKELIEYPLTHPEVYVHLGVEPPRGILLHGPPGTGKTML 209

Query: 826 ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
           A ++A E+G  F+ +  PE+ S   GESE+ VR LF +A  NAP+I+F DEID +   R 
Sbjct: 210 ANSIAGESGAAFIRISAPEIVSGMSGESEQKVRELFQEAVKNAPAIVFIDEIDAITPKRE 269

Query: 886 KESDGVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLY 941
               G  +  R+++QLL  +D L         V +I ATNRPD +D AL R GRFDR + 
Sbjct: 270 TVQRG--MERRIVAQLLTSIDSLSLENTGGKPVLIIGATNRPDALDSALRRAGRFDREIC 327

Query: 942 VGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           +G P+ET R  I +    K+      + +E+A  + G  GAD+  + +EAA+ A+
Sbjct: 328 LGIPDETARMSILQKLAGKMRLDGAFDFQEIARKTPGYVGADLVSLTKEAAVIAV 382



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/219 (41%), Positives = 124/219 (56%), Gaps = 26/219 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             +LGL    GVLL+GPPG GKT LA+  A++S  N  ++ GPE++ +  GESE+A+ +V
Sbjct: 496 FQALGLEMPAGVLLYGPPGCGKTLLAKAIANESEANFISIKGPELLDKYVGESERAVRQV 555

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG-----GEELSQRMVATLLNLMDGVCRTDGVLVI 550
           F  A  S+P V+F DELDA+ P R +G     G  +++R+V  LL  MDG+     V VI
Sbjct: 556 FQRARASSPCVIFFDELDALCPRRSNGMGYDSGNSVTERVVNQLLTEMDGLDSRKNVFVI 615

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNRPD I+PA+ RPGRLD+ + + +              P P  RL IL  +      
Sbjct: 616 AATNRPDIIDPAMLRPGRLDKLLYVPL--------------PVPEDRLSILQTV---TRR 658

Query: 611 SLLDSEVEYLSMA----THGFVGADLAALCNEAALVCLR 645
             LD  +   S+A      GF GAD++AL  EA L  LR
Sbjct: 659 CRLDPSICLSSIALDQRCDGFSGADISALVREAGLAALR 697


>gi|330805727|ref|XP_003290830.1| cell division cycle protein 48 [Dictyostelium purpureum]
 gi|325079040|gb|EGC32661.1| cell division cycle protein 48 [Dictyostelium purpureum]
          Length = 792

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/594 (38%), Positives = 334/594 (56%), Gaps = 100/594 (16%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG+ K+   +++++ +         ++G++P KG+LL+GPPG GKT +AR  A+++G  
Sbjct: 204  IGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAF 263

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 264  FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVERRIV 323

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               +
Sbjct: 324  SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------TI 369

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
            P    RLEIL      M+   LD  V  E +S  THG+VGADLAALC E+AL C+R    
Sbjct: 370  PDATGRLEILRIHTKNMK---LDETVDLEAVSNETHGYVGADLAALCTESALQCIRE--- 423

Query: 650  IQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL-LSS 708
                 DV+                L+D   S  I       L+S S       T+L LS+
Sbjct: 424  ---KMDVID---------------LEDDTISAEI-------LESMSVTQDHFRTALTLSN 458

Query: 709  SLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
               LR TV E+                                       P+   E I  
Sbjct: 459  PSALRETVVEV---------------------------------------PTTTWEDIGG 479

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +  VK E           L E V++P +H E F++ G +P  G+L +GPPGC KTL+A+A
Sbjct: 480  LEGVKRE-----------LRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKA 528

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG-KE 887
            +A+E   NF+++KGPEL + W GESE  VR LF KAR  AP ++FFDE+D +A  RG  +
Sbjct: 529  IANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQ 588

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             D     DRV++Q+L E+DG++ + NV +I ATNRPD IDPA+LRPGR D+L+Y+  P+ 
Sbjct: 589  GDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDL 648

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              R  I +  L+K P + DV++  LA  ++G +GAD++ IC+ A   AI E+++
Sbjct: 649  PSRMAILKACLKKSPVAKDVDLDFLAQKTQGFSGADLTEICQRACKLAIRESIE 702



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/268 (42%), Positives = 160/268 (59%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++D+GG R+   Q+ E VE P +H + FK IG +PP GIL++GPPGC KT++ARAVA
Sbjct: 198  EVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVA 257

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 258  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQG- 316

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +  P+ T R
Sbjct: 317  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGR 375

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             EI RIH + +     V++  ++  + G  GAD++ +C E+A+  I E +D         
Sbjct: 376  LEILRIHTKNMKLDETVDLEAVSNETHGYVGADLAALCTESALQCIREKMDVIDLEDDTI 435

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H +TA+    PS + 
Sbjct: 436  SAEILESMSVTQDHFRTALTLSNPSALR 463



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 35/299 (11%)

Query: 402 VQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           V  T  +DI  L G+ +E  + + +             G++P+KGVL +GPPG GKT LA
Sbjct: 469 VPTTTWEDIGGLEGVKRE--LRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLA 526

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-- 519
           +  A++   N  ++ GPE+++  +GESE  + E+FD A Q+AP V+F DELD+IA +R  
Sbjct: 527 KAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGS 586

Query: 520 --KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
              D G     R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRLD+ I I  
Sbjct: 587 SQGDAGGA-GDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI-- 643

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                        +P    R+ IL A L     +  D ++++L+  T GF GADL  +C 
Sbjct: 644 ------------PLPDLPSRMAILKACLKKSPVA-KDVDLDFLAQKTQGFSGADLTEICQ 690

Query: 638 EAALVCLRR--YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSA 694
            A  + +R      IQT+     S  T         TM  D D S  + E +RD  + A
Sbjct: 691 RACKLAIRESIEKDIQTTRARQESGDT---------TM--DEDTSDPVPEITRDHFEEA 738


>gi|308272185|emb|CBX28792.1| Cell division cycle protein 48 homolog AF_1297 [uncultured
           Desulfobacterium sp.]
          Length = 711

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/586 (38%), Positives = 327/586 (55%), Gaps = 95/586 (16%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +          LG+   KGVLL+GPPG GKT +AR  AH++  N
Sbjct: 183 IGGLKSQLQRIREMIELPLRYPEVFERLGIDAPKGVLLYGPPGCGKTLIARAIAHETEAN 242

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F+++GPE++ + YGESE  L ++F+ A++  P+++F+DE+DAIAP R++   ++ +R+V
Sbjct: 243 FFSISGPEIIHKFYGESEAHLRKIFEEATRKGPSILFLDEIDAIAPRRENVVGDVEKRVV 302

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+ +   V+VIAATN P++++PALRRPGR DREI I               +
Sbjct: 303 AQLLALMDGLNKRQNVIVIAATNIPNALDPALRRPGRFDREIVI--------------PI 348

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           P    RLEIL     GM  +  D  +E+L+  THGFVGADL ALC E+A++CLR   +I 
Sbjct: 349 PDRRGRLEILEIHSRGMPLA-KDVLMEHLAEITHGFVGADLEALCRESAMICLR---QIM 404

Query: 652 TSSDVLHSTGTLFEFEGHSDTMLQDSDCS-RNITESSRDCLDSASPCTSDLPTSLLSSSL 710
              D    TG  +E     +  ++D   + R I  S+   +   SP              
Sbjct: 405 GEID-FGQTGIPYETLSKLEVRMEDFLAALREIEPSAIREVFVESP-------------- 449

Query: 711 PLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVP 770
                      N H    D  GGMF              F K R+             + 
Sbjct: 450 -----------NIH---WDDVGGMF--------------FLKERL-------------IE 468

Query: 771 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            V+W                   P K+   F++ G  PP GIL+ GPPGC KT+MA+A+A
Sbjct: 469 AVEW-------------------PLKYPRLFEKGGVTPPKGILLVGPPGCGKTMMAKAIA 509

Query: 831 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
           +E+ +NF+++KGP L SKWVGESEK VR +F KAR  AP IIFFDEID L   R   +  
Sbjct: 510 TESHVNFISIKGPALMSKWVGESEKGVREIFHKARQAAPCIIFFDEIDSLVPTRSAGASD 569

Query: 891 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
             VS+R++SQ L E DG+ +   V V+ ATNR D +D A+LRPGRFD ++ +  P++ DR
Sbjct: 570 SHVSERILSQFLAEFDGIDELRGVLVLGATNRLDMLDAAVLRPGRFDDIVEMMMPDQRDR 629

Query: 951 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           E IF +HLR+ P +  V    LA  +EG +GADI+ + R+AA++A+
Sbjct: 630 EAIFAVHLRQKPVAKGVQSAALAEKTEGFSGADIAAVVRKAAMTAV 675



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 109/265 (41%), Positives = 159/265 (60%), Gaps = 17/265 (6%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +ED+GG +    ++ E +E P ++ E F+R+G   P G+L++GPPGC KTL+ARA+A E 
Sbjct: 180  YEDIGGLKSQLQRIREMIELPLRYPEVFERLGIDAPKGVLLYGPPGCGKTLIARAIAHET 239

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              NF ++ GPE+  K+ GESE  +R +F +A    PSI+F DEID +A  R  E+    V
Sbjct: 240  EANFFSISGPEIIHKFYGESEAHLRKIFEEATRKGPSILFLDEIDAIAPRR--ENVVGDV 297

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++QLL  +DGL++R NV VIAATN P+ +DPAL RPGRFDR + +  P+   R EI
Sbjct: 298  EKRVVAQLLALMDGLNKRQNVIVIAATNIPNALDPALRRPGRFDREIVIPIPDRRGRLEI 357

Query: 954  FRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------------E 998
              IH R +P + DV +  LA ++ G  GAD+  +CRE+A+  +                E
Sbjct: 358  LEIHSRGMPLAKDVLMEHLAEITHGFVGADLEALCRESAMICLRQIMGEIDFGQTGIPYE 417

Query: 999  NLDASRITMQHLKTAIRHVQPSEIH 1023
             L    + M+    A+R ++PS I 
Sbjct: 418  TLSKLEVRMEDFLAALREIEPSAIR 442



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 124/219 (56%), Gaps = 31/219 (14%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+ P KG+LL GPPG GKT +A+  A +S VN  ++ GP ++S+  GESE+ + E+F  A
Sbjct: 484 GVTPPKGILLVGPPGCGKTMMAKAIATESHVNFISIKGPALMSKWVGESEKGVREIFHKA 543

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            Q+AP ++F DE+D++ P R  G  +  +S+R+++  L   DG+    GVLV+ ATNR D
Sbjct: 544 RQAAPCIIFFDEIDSLVPTRSAGASDSHVSERILSQFLAEFDGIDELRGVLVLGATNRLD 603

Query: 558 SIEPALRRPGRLDREIEI------DMSFLFSL-LKNSPAAVPSPAQRLEILHALLSGMEH 610
            ++ A+ RPGR D  +E+      D   +F++ L+  P A                G++ 
Sbjct: 604 MLDAAVLRPGRFDDIVEMMMPDQRDREAIFAVHLRQKPVA---------------KGVQS 648

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +        L+  T GF GAD+AA+  +AA+  +RR  K
Sbjct: 649 A-------ALAEKTEGFSGADIAAVVRKAAMTAVRRAVK 680


>gi|384486828|gb|EIE79008.1| hypothetical protein RO3G_03713 [Rhizopus delemar RA 99-880]
          Length = 834

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 249/671 (37%), Positives = 362/671 (53%), Gaps = 65/671 (9%)

Query: 410  ISKLGGLSKEYA-ILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGG+ +    I++ I +  +        G++P +GVLLHGPPG GKT LA   A + 
Sbjct: 179  LSDLGGIDQCIEEIMELIAMPLAHPEVYIHTGVQPPRGVLLHGPPGCGKTKLAHAIAGEL 238

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV  F ++ P +VS   GESE+ + EVF+ A  +AP ++FIDE+DAI P R+    E+ +
Sbjct: 239  GVPFFNISAPSIVSGMSGESEKKIREVFEEARDNAPCLLFIDEIDAITPKRETAQREMER 298

Query: 529  RMVATLLNLMDGV----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  MD +    C    V++I ATNRPDS++ ALRR GR DREI +         
Sbjct: 299  RIVAQLLTCMDDLSWEKCNNKPVMIIGATNRPDSLDAALRRAGRFDREISM--------- 349

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VP    R +IL  L S +  S  D +   L+ AT G+VGADL AL   A ++ +
Sbjct: 350  -----GVPDEKSREKILQVLSSKLRLSG-DFDFTELAKATPGYVGADLQALITTAGVIAV 403

Query: 645  RRYSKIQTSSDVLHSTGTLF----EFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSD 700
            +R  K   S+ V+++         E E   +   +  +      +     +DS    T+D
Sbjct: 404  KRIFKHLRSAGVINALNNQDKNEDEIENKEEDKEERREKEDEEIDQDNSNVDSMEEVTAD 463

Query: 701  LPTSLLS-SSLPLRGTVSEIADNFHNGVSDSSGGMFMSE------------------KGC 741
              + L   +S+ +   V EI       V +      + +                  +  
Sbjct: 464  KESQLEEHNSMDIDEGVIEIQPIQTTSVEEFEAQTPLEQIRNISEFIKAHKEPLSETQLE 523

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L +   DF+ A  KV+PS+ RE    VP V W+D+G  + V+ +L  AV  P  H E F
Sbjct: 524  SLSITHEDFKHALKKVQPSSKREGFATVPDVTWDDIGALQFVRDELRMAVVEPINHPEFF 583

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +R+G   P G+L++GPPGC KTL+A+AVA+E+  NF++VKGPEL +K+VGESE+ VR +F
Sbjct: 584  ERVGITNPAGVLLWGPPGCGKTLLAKAVANESNTNFISVKGPELLNKYVGESERGVRQVF 643

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            A+ARA+AP +IFFDE+D L + R  +    S   RV++ LL ELDG+  R  V VIAATN
Sbjct: 644  ARARASAPCVIFFDELDALCSRRDDQQTDASA--RVVNTLLTELDGVENRSQVYVIAATN 701

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELA--CLSEGC 979
            RPD IDPA+LRPGR D+LLYV  P   +R +I +    K P   +V++ ++A     EG 
Sbjct: 702  RPDMIDPAMLRPGRLDKLLYVELPTPQERLDILKKLSSKTPLHPEVSLEDVANDTRCEGF 761

Query: 980  TGADISLICREAAISAIEEN--------LDASR-------ITMQHLKTAIRHVQPSEIHS 1024
            +GAD++ + RE+A++++           LDA         +T Q    A   V PS +  
Sbjct: 762  SGADLASLVRESAVASLRSKFYSSGVVRLDAKLTSVEEIFVTKQDFDIAFTKVSPSVLPQ 821

Query: 1025 YKELSAKFQRL 1035
             K   A F RL
Sbjct: 822  DK---AHFDRL 829



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/249 (38%), Positives = 144/249 (57%), Gaps = 13/249 (5%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P  K  D+GG  +   ++ME +  P  H E +   G +PP G+L+ GPPGC KT +A A
Sbjct: 174  IPTAKLSDLGGIDQCIEEIMELIAMPLAHPEVYIHTGVQPPRGVLLHGPPGCGKTKLAHA 233

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A E G+ F  +  P + S   GESEK +R +F +AR NAP ++F DEID +   R  E+
Sbjct: 234  IAGELGVPFFNISAPSIVSGMSGESEKKIREVFEEARDNAPCLLFIDEIDAITPKR--ET 291

Query: 889  DGVSVSDRVMSQLLVELDGLH-QRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
                +  R+++QLL  +D L  ++ N   V +I ATNRPD +D AL R GRFDR + +G 
Sbjct: 292  AQREMERRIVAQLLTCMDDLSWEKCNNKPVMIIGATNRPDSLDAALRRAGRFDREISMGV 351

Query: 945  PNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR 1004
            P+E  RE+I ++   K+  S D +  ELA  + G  GAD+  +   A + A++      R
Sbjct: 352  PDEKSREKILQVLSSKLRLSGDFDFTELAKATPGYVGADLQALITTAGVIAVK------R 405

Query: 1005 ITMQHLKTA 1013
            I  +HL++A
Sbjct: 406  I-FKHLRSA 413


>gi|355336750|gb|AER57860.1| cell division cycle protein 48 [Acytostelium subglobosum]
          Length = 793

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/595 (38%), Positives = 333/595 (55%), Gaps = 102/595 (17%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG+ K+   +++++ +         ++G++P KG+LL+GPPG GKT +AR  A+++G  
Sbjct: 203  IGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAF 262

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPE++S+  GESE  L + F+ A ++APA++FIDE+D+IAP R+    E+ +R+V
Sbjct: 263  FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKREKTQGEVERRIV 322

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I              ++
Sbjct: 323  SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------SI 368

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSK 649
            P    RLEIL      M+   LD  V+  S+   THG+VGADLAALC E AL C+R    
Sbjct: 369  PDATGRLEILRIHTKNMK---LDESVDLESIGNETHGYVGADLAALCTEGALQCIRE--- 422

Query: 650  IQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSS 709
                 DV+                L+D   S  I ES           T D   + +++S
Sbjct: 423  ---KMDVID---------------LEDDTISAEILES--------MSVTQDHFRTAMATS 456

Query: 710  LP--LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
             P  LR TV E+                                       P+   E I 
Sbjct: 457  NPSALRETVVEV---------------------------------------PTTTWEDIG 477

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
             +  VK       RE+K    E V++P +H E F++ G +P  G+L +GPPGC KTL+A+
Sbjct: 478  GLEGVK-------RELK----ETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAK 526

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            A+A+E   NF+++KGPEL + W GESE  VR LF KAR  AP ++FFDE+D +A  RG  
Sbjct: 527  AIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARARGSS 586

Query: 888  S-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            S D     DRV++Q+L E+DG+  + NV +I ATNRPD IDPA+LRPGR D+L+Y+  P+
Sbjct: 587  SGDAGGAGDRVINQILTEMDGMGSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 646

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
               R  I +  L K P S DV++  +A  + G +GAD++ IC+ A   AI E+++
Sbjct: 647  LPSRVAILKACLHKSPVSKDVDLEFMAQKTHGFSGADLTEICQRACKLAIRESIE 701



 Score =  222 bits (566), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 114/268 (42%), Positives = 158/268 (58%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++D+GG R+   Q+ E VE P +H + FK IG +PP GIL++GPPGC KT++ARAVA
Sbjct: 197  EVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVA 256

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAP+IIF DEID +A  R K    
Sbjct: 257  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKREKTQG- 315

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +  P+ T R
Sbjct: 316  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDISIPDATGR 374

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             EI RIH + +     V++  +   + G  GAD++ +C E A+  I E +D         
Sbjct: 375  LEILRIHTKNMKLDESVDLESIGNETHGYVGADLAALCTEGALQCIREKMDVIDLEDDTI 434

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H +TA+    PS + 
Sbjct: 435  SAEILESMSVTQDHFRTAMATSNPSALR 462



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/249 (38%), Positives = 137/249 (55%), Gaps = 24/249 (9%)

Query: 402 VQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSL 460
           V  T  +DI  L G+ +E   LK+ +             G++P+KGVL +GPPG GKT L
Sbjct: 468 VPTTTWEDIGGLEGVKRE---LKETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLL 524

Query: 461 ARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR- 519
           A+  A++   N  ++ GPE+++  +GESE  + E+FD A Q+AP V+F DELD+IA AR 
Sbjct: 525 AKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARARG 584

Query: 520 ---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
               D G     R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRLD+ I I 
Sbjct: 585 SSSGDAGGA-GDRVINQILTEMDGMGSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI- 642

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                         +P    R+ IL A L     S  D ++E+++  THGF GADL  +C
Sbjct: 643 -------------PLPDLPSRVAILKACLHKSPVS-KDVDLEFMAQKTHGFSGADLTEIC 688

Query: 637 NEAALVCLR 645
             A  + +R
Sbjct: 689 QRACKLAIR 697


>gi|310750391|ref|NP_001073044.2| nuclear valosin-containing protein-like [Gallus gallus]
          Length = 844

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 235/602 (39%), Positives = 333/602 (55%), Gaps = 82/602 (13%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +G LLHGPPG GKT LA+  A +  + +  V   E+VS   GESEQ L E+FD 
Sbjct: 287  LGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQ 346

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP V+FIDE+DAI P R+   +++ +R+VA LL  +D    V  T  VLVI ATNR
Sbjct: 347  AVLNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNR 406

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R +IL  L   ++   L  
Sbjct: 407  PDSLDPALRRAGRFDREICL--------------GIPDEAAREKILQTLCRKLK---LPG 449

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
              ++L +A  T G+VGADL ALC EAA+  + R                          +
Sbjct: 450  SFDFLHLAHLTPGYVGADLMALCREAAMCTVNR-------------------------VL 484

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
            ++  +  R   ++  +  + +    +++P  L      L+       D            
Sbjct: 485  IKSEEQQRKYVQAGGNTAEESVGIETEIPEELQRLLYLLKKQDPLPEDQLQK-------- 536

Query: 734  MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
                     L +E+ DF  A   V+PSA RE  + +P V W D+G   +V+ +L  A+  
Sbjct: 537  ---------LCIEMNDFIVALSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMAILA 587

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P ++ E FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGES
Sbjct: 588  PVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 647

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            E+AVR +F +AR +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  
Sbjct: 648  ERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGASV--RVVNQLLTEMDGLENRQQ 705

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIR 970
            V ++AATNRPD IDPA+LRPGR D+ LYVG P   DR  I +   +   + P  +DVN+ 
Sbjct: 706  VFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDTDVNLE 765

Query: 971  ELACLSEGC---TGADISLICREAAISAIEENL---------DASRITMQHLKTAIRHVQ 1018
            E+A  S+ C   TGAD+S + REA+I A+ + +            +I+ +H + A R V+
Sbjct: 766  EIA-YSQQCDCYTGADLSALVREASICALRQEMALPTTKSKKGEIKISRKHFEEAFRKVK 824

Query: 1019 PS 1020
             S
Sbjct: 825  SS 826



 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/271 (38%), Positives = 148/271 (54%), Gaps = 6/271 (2%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P VK+EDVGG  E   ++ + +    +H E +  +G  PP G L+ GPPGC KTL+A+A+
Sbjct: 254  PSVKFEDVGGNDETLKEICKML-IHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAI 312

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E  L  L V   E+ S   GESE+ +R LF +A  NAP ++F DEID +   R  E  
Sbjct: 313  AGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKR--EVA 370

Query: 890  GVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               +  R+++QLL  LD L+       V VI ATNRPD +DPAL R GRFDR + +G P+
Sbjct: 371  SKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 430

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRIT 1006
            E  RE+I +   RK+      +   LA L+ G  GAD+  +CREAA+  +   L  S   
Sbjct: 431  EAAREKILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCREAAMCTVNRVLIKSEEQ 490

Query: 1007 MQHLKTAIRHVQPSEIHSYKELSAKFQRLVH 1037
             +    A  +     +    E+  + QRL++
Sbjct: 491  QRKYVQAGGNTAEESVGIETEIPEELQRLLY 521



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/222 (40%), Positives = 126/222 (56%), Gaps = 18/222 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             +LGL    GVLL GPPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +V
Sbjct: 595 FKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQV 654

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A  SAP V+F DE+DA+ P R D     S R+V  LL  MDG+     V ++AATNR
Sbjct: 655 FQRARNSAPCVIFFDEVDALCPRRSDRESGASVRVVNQLLTEMDGLENRQQVFIMAATNR 714

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+PA+ RPGRLD+ + +               +P P  RL IL  +        LD+
Sbjct: 715 PDIIDPAILRPGRLDKTLYV--------------GLPPPEDRLAILKTITKDGTRPPLDT 760

Query: 616 EVEYLSMA----THGFVGADLAALCNEAALVCLRRYSKIQTS 653
           +V    +A       + GADL+AL  EA++  LR+   + T+
Sbjct: 761 DVNLEEIAYSQQCDCYTGADLSALVREASICALRQEMALPTT 802


>gi|26344299|dbj|BAC35806.1| unnamed protein product [Mus musculus]
          Length = 698

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 241/601 (40%), Positives = 331/601 (55%), Gaps = 74/601 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+FD 
Sbjct: 135  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQ 194

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP +VFIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 195  AVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 254

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DRE+ +               +P  A R  IL  L   +    L  
Sbjct: 255  PDSLDPALRRAGRFDREVCL--------------GIPDEAARERILQTLCRKLR---LPE 297

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
               +  +A  T GFVGADL ALC EAA+  + R    Q +           E EG     
Sbjct: 298  TFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKP-----EIEGLPSEG 352

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
             Q+       T  ++D L             LL    PL                     
Sbjct: 353  DQEERLGAEPTSETQDELQRL--------LGLLRDQDPLS-------------------- 384

Query: 734  MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
                E+   L +EL DF  A  +V+PSA RE  + VP V W D+G   +++ +L+ A+  
Sbjct: 385  ---EEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILA 441

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P ++ + F+ +G   P GIL+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGES
Sbjct: 442  PVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 501

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            E+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  
Sbjct: 502  ERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLETRQQ 559

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIR 970
            V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P   DVN+ 
Sbjct: 560  VFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLE 619

Query: 971  ELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQP 1019
             +A  L   C TGAD++ + REA++ A+ + + A          +++ +H + A + V+P
Sbjct: 620  TIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKP 679

Query: 1020 S 1020
            S
Sbjct: 680  S 680



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/259 (41%), Positives = 148/259 (57%), Gaps = 14/259 (5%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
           L+ VD E   +  + +  R   L++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 77  LQEVDGEIEALLQKKAKARSTELQISNVKFEDVGGNDATLKEVCKMLIH-----MRHPEV 131

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
           ++ +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 132 YQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 191

Query: 861 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
           F +A +NAP I+F DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 192 FDQAVSNAPCIVFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 249

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      N   LA L+ 
Sbjct: 250 GATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTP 309

Query: 978 GCTGADISLICREAAISAI 996
           G  GAD+  +CREAA+ A+
Sbjct: 310 GFVGADLMALCREAAMCAV 328



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 140/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  +  E  ++  I+          +LGL    G+LL G
Sbjct: 407 PSAKREGFVTVPNVTWADIGALEDIRDE--LIMAILAPVRNPDQFRTLGLGTPAGILLAG 464

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 465 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 524

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 525 VDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDK 584

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGF 627
            + +               +P PA R+ IL  +        LD +V   ++A     + +
Sbjct: 585 TLFV--------------GLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCY 630

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL AL  EA+L  LR+
Sbjct: 631 TGADLTALVREASLCALRQ 649


>gi|380028284|ref|XP_003697836.1| PREDICTED: nuclear valosin-containing protein [Apis florea]
          Length = 939

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 246/666 (36%), Positives = 366/666 (54%), Gaps = 65/666 (9%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
             S +GG  K    +  ++           LG+ P +G LLHGPPG GKT LA   A + G
Sbjct: 289  FSDIGGNDKVLKTVCKLLAHMKHPEIFKELGISPPRGFLLHGPPGCGKTLLAHAIAGELG 348

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            + L  V  PE+V+   GESE  + E+F+ A   AP V+F+DE+D++AP R     E+ +R
Sbjct: 349  IPLLKVAAPELVTGVSGESEARIRELFEQALAIAPCVIFLDEIDSVAPHRATAQREMERR 408

Query: 530  MVATLLNLMDGVCRTDG---VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +VA LL+ +D +   +    VLV+ ATNRPDS++PALRR GR D E+ +           
Sbjct: 409  IVAQLLSCLDELSLKENGTRVLVLGATNRPDSLDPALRRAGRFDHEVCL----------- 457

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCL 644
                +P    R +IL       E   L   V   ++A  T GFVGADL AL  EAA+  +
Sbjct: 458  ---GIPDRDARAKILAV---HTEKVALSPNVSLSTIASLTPGFVGADLVALIREAAMAAV 511

Query: 645  RRY------------SKIQTSSDVLHSTGTLFEFEGH--SDTMLQDSDCSRNITESSRDC 690
             R             S+I  ++ V+      FE  G+  ++  ++ S   +N+ +S    
Sbjct: 512  DRILENLKSVPDNKSSEIPENNTVIEKKTENFENSGNLVNEVTIEPSTSDQNVPKSE--- 568

Query: 691  LDSASPCTSDLPTSLLSSSLP-LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVD 749
               +S  T ++     +S  P L G ++ + ++              +E+   L +E  D
Sbjct: 569  ---SSQATLEMDVIQENSKSPDLTGLLTWLRND----------PPLPTEQLSNLCIEHSD 615

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            FE A   ++PSA RE    VP V W+DVG  R+++ +L  A+  P +H E F  +G   P
Sbjct: 616  FETALRIIQPSAKREGFATVPDVTWDDVGSLRDIREELQMAILAPIRHSEHFTALGLTTP 675

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
            TG+L+ GPPGC KTL+A+A+A+EAG+NF++VKGPEL + +VGESEKAVR  F +AR +AP
Sbjct: 676  TGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELLNMYVGESEKAVRQCFIRARNSAP 735

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
             +IFFDE+D L   R  E D  S + RV++Q+L E+DG+  R  V ++AA+NRPD IDPA
Sbjct: 736  CVIFFDELDALCP-RRSEGDN-SATSRVVNQMLTEMDGVEGRQGVFLMAASNRPDIIDPA 793

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELACLS--EGCTGADI 984
            +LRPGR D++LYV  P   DR +I R   +   K   ++DVN+ E+   S  +G TGAD+
Sbjct: 794  VLRPGRLDKILYVDLPTSADRVDILRALTKNATKPKLAADVNLEEIGYNSKCDGYTGADL 853

Query: 985  SLICREAAISAIEENLDAS-----RITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSN 1039
            + + REA I A+ E +D        I+M+H+  A   ++PS      +   K +RL    
Sbjct: 854  AALIREAGIEALRELMDMHYSGQPEISMRHIVVAFDKIRPSVQEKDIKHYEKLKRLYSIK 913

Query: 1040 AEADES 1045
             ++D++
Sbjct: 914  KKSDDT 919



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/235 (41%), Positives = 140/235 (59%), Gaps = 6/235 (2%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            PK+ + D+GG  +V   + + +    KH E FK +G  PP G L+ GPPGC KTL+A A+
Sbjct: 285  PKITFSDIGGNDKVLKTVCKLLAH-MKHPEIFKELGISPPRGFLLHGPPGCGKTLLAHAI 343

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E G+  L V  PEL +   GESE  +R LF +A A AP +IF DEID +A  R     
Sbjct: 344  AGELGIPLLKVAAPELVTGVSGESEARIRELFEQALAIAPCVIFLDEIDSVAPHRATAQR 403

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               +  R+++QLL  LD L  + N   V V+ ATNRPD +DPAL R GRFD  + +G P+
Sbjct: 404  --EMERRIVAQLLSCLDELSLKENGTRVLVLGATNRPDSLDPALRRAGRFDHEVCLGIPD 461

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
               R +I  +H  K+  S +V++  +A L+ G  GAD+  + REAA++A++  L+
Sbjct: 462  RDARAKILAVHTEKVALSPNVSLSTIASLTPGFVGADLVALIREAAMAAVDRILE 516


>gi|328781990|ref|XP_392923.4| PREDICTED: smallminded [Apis mellifera]
          Length = 939

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 251/674 (37%), Positives = 365/674 (54%), Gaps = 81/674 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
             S +GG  K    +  ++           LG+ P +G LLHGPPG GKT LA   A + G
Sbjct: 289  FSDIGGNDKVLKTVCKLLAHMKHPEIFKELGISPPRGFLLHGPPGCGKTLLAHAIAGELG 348

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            + L  V  PE+V+   GESE  + E+F+ A   AP V+F+DE+D++AP R     E+ +R
Sbjct: 349  IPLLKVAAPELVTGVSGESEARIRELFEQALAIAPCVIFLDEIDSVAPHRATAQREMERR 408

Query: 530  MVATLLNLMDGVCRTDG---VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +VA LL+ +D +   +    VLV+ ATNRPDS++PALRR GR D E+ +           
Sbjct: 409  IVAQLLSCLDELSLKENGTRVLVLGATNRPDSLDPALRRAGRFDHEVCL----------- 457

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCL 644
                +P    R +IL       E   L   V   ++A  T GFVGADL AL  EAA+  +
Sbjct: 458  ---GIPDRDARAKILAV---HTEKVALSPNVSLSTIASLTPGFVGADLVALIREAAMAAV 511

Query: 645  RRY------------SKIQTSSDVLHSTGTLFEFEGH--SDTMLQDSDCSRNI--TESSR 688
             R             S+I  ++ V+      FE  G+   +  ++ S   +N+  +ESS+
Sbjct: 512  DRILENLKSVPDNKSSEIPENNTVIEKKTENFENSGNLVDEVTIEPSTSDQNVPKSESSQ 571

Query: 689  DCLD-------SASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC 741
              L+       S SP  + L T  L +  PL                        +E+  
Sbjct: 572  TTLEMDVIQENSKSPDLTGLLT-WLRNDPPLP-----------------------TEQLS 607

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             L +E  DFE A   ++PSA RE    VP V W+DVG  R+++ +L  A+  P +H E F
Sbjct: 608  NLCIEHSDFETALRIIQPSAKREGFATVPDVTWDDVGSLRDIREELQMAILAPIRHSEHF 667

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
              +G   PTG+L+ GPPGC KTL+A+A+A+EAG+NF++VKGPEL + +VGESEKAVR  F
Sbjct: 668  TALGLTTPTGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELLNMYVGESEKAVRQCF 727

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             +AR +AP +IFFDE+D L   R  E D  S + RV++Q+L E+DG+  R  V ++AA+N
Sbjct: 728  IRARNSAPCVIFFDELDALCP-RRSEGDN-SATSRVVNQMLTEMDGVEGRQGVFLMAASN 785

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELACLS-- 976
            RPD IDPA+LRPGR D++LYV  P   DR +I R   +   K   ++DVN+ E+   S  
Sbjct: 786  RPDIIDPAVLRPGRLDKILYVDLPTSADRVDILRALTKNATKPKLAADVNLEEIGYNSKC 845

Query: 977  EGCTGADISLICREAAISAIEENLDAS-----RITMQHLKTAIRHVQPSEIHSYKELSAK 1031
            +G TGAD++ + REA I A+ E +D        I+M+H+  A   ++PS      +   K
Sbjct: 846  DGYTGADLAALIREAGIEALRELMDMHYSGQPEISMRHIVVAFDKIRPSVQEKDIKHYEK 905

Query: 1032 FQRLVHSNAEADES 1045
             +RL     ++D++
Sbjct: 906  LKRLYSIKKKSDDT 919



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/235 (41%), Positives = 140/235 (59%), Gaps = 6/235 (2%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            PK+ + D+GG  +V   + + +    KH E FK +G  PP G L+ GPPGC KTL+A A+
Sbjct: 285  PKITFSDIGGNDKVLKTVCKLLAH-MKHPEIFKELGISPPRGFLLHGPPGCGKTLLAHAI 343

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E G+  L V  PEL +   GESE  +R LF +A A AP +IF DEID +A  R     
Sbjct: 344  AGELGIPLLKVAAPELVTGVSGESEARIRELFEQALAIAPCVIFLDEIDSVAPHRATAQR 403

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               +  R+++QLL  LD L  + N   V V+ ATNRPD +DPAL R GRFD  + +G P+
Sbjct: 404  --EMERRIVAQLLSCLDELSLKENGTRVLVLGATNRPDSLDPALRRAGRFDHEVCLGIPD 461

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
               R +I  +H  K+  S +V++  +A L+ G  GAD+  + REAA++A++  L+
Sbjct: 462  RDARAKILAVHTEKVALSPNVSLSTIASLTPGFVGADLVALIREAAMAAVDRILE 516


>gi|402857091|ref|XP_003893106.1| PREDICTED: nuclear valosin-containing protein-like isoform 1 [Papio
            anubis]
          Length = 856

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 331/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPGEASRERILQTLCRKLR---LPQ 455

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 456  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRGLMKLQEQ------------------- 496

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                               +   P   DLP+  +        + SE  D     +     
Sbjct: 497  -------------------EKKDPEMEDLPSKGVQEESLGTESTSETQDELQRLLGLLRD 537

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 538  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 597

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 598  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 657

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 658  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 715

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P  TDR  I +   +   K P  +DVN
Sbjct: 716  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPTDRLAILKTITKNGTKPPLDADVN 775

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V
Sbjct: 776  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKV 835

Query: 1018 QPS 1020
            + S
Sbjct: 836  RSS 838



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/263 (40%), Positives = 147/263 (55%), Gaps = 14/263 (5%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
            L+ VD E   +  + +  R +  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 235  LQEVDGEIEAVLQKKTKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 289

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
            +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 290  YHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 349

Query: 861  FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
            F +A +NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 350  FEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 407

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
             ATNRPD +DPAL R GRFDR + +G P E  RE I +   RK+      +   LA L+ 
Sbjct: 408  GATNRPDSLDPALRRAGRFDREICLGIPGEASRERILQTLCRKLRLPQAFDFCHLAHLTP 467

Query: 978  GCTGADISLICREAAISAIEENL 1000
            G  GAD+  +CREAA+ A+   L
Sbjct: 468  GFVGADLMALCREAAMCAVNRGL 490



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P P  RL IL  +        LD++V   ++A       +
Sbjct: 743 TLFV--------------GLPPPTDRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 789 TGADLSALVREASICALRQEMARQKSGN 816


>gi|355745883|gb|EHH50508.1| hypothetical protein EGM_01352 [Macaca fascicularis]
          Length = 856

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 242/602 (40%), Positives = 333/602 (55%), Gaps = 76/602 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPGEASRERILQTLCRKLR---LPQ 455

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
              ++  +A  T GFVGADL ALC EAA+  + R         VL                
Sbjct: 456  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNR---------VLMK-------------- 492

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
            LQ+ +                 P   DLP+  +        + SE  D     +      
Sbjct: 493  LQEQE--------------KKDPEMEDLPSKGVQEESLGTESTSETQDELQRLLGLLRDQ 538

Query: 734  MFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
              +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+ 
Sbjct: 539  DPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAIL 598

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGE
Sbjct: 599  APVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 658

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R 
Sbjct: 659  SERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEARQ 716

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNI 969
             V ++AATNRPD IDPA+LRPGR D+ L+VG P  TDR  I +   +   K P  +DVN+
Sbjct: 717  QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPTDRLAILKTITKNGTKPPLDADVNL 776

Query: 970  RELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
              +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V+
Sbjct: 777  EAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKVR 836

Query: 1019 PS 1020
             S
Sbjct: 837  SS 838



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 146/259 (56%), Gaps = 14/259 (5%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
           L+ VD E   +  + +  R +  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 235 LQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 289

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
           +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 290 YHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 349

Query: 861 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
           F +A +NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 350 FEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 407

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNRPD +DPAL R GRFDR + +G P E  RE I +   RK+      +   LA L+ 
Sbjct: 408 GATNRPDSLDPALRRAGRFDREICLGIPGEASRERILQTLCRKLRLPQAFDFCHLAHLTP 467

Query: 978 GCTGADISLICREAAISAI 996
           G  GAD+  +CREAA+ A+
Sbjct: 468 GFVGADLMALCREAAMCAV 486



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P P  RL IL  +        LD++V   ++A       +
Sbjct: 743 TLFV--------------GLPPPTDRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 789 TGADLSALVREASICALRQEMARQKSGN 816


>gi|109018123|ref|XP_001096627.1| PREDICTED: nuclear VCP-like isoform 4 [Macaca mulatta]
          Length = 856

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 242/602 (40%), Positives = 333/602 (55%), Gaps = 76/602 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPGEASRERILQTLCRKLR---LPQ 455

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
              ++  +A  T GFVGADL ALC EAA+  + R         VL                
Sbjct: 456  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNR---------VLMK-------------- 492

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
            LQ+ +                 P   DLP+  +        + SE  D     +      
Sbjct: 493  LQEQE--------------KKDPEMEDLPSKGVQEESLGTESTSETQDELQRLLGLLRDQ 538

Query: 734  MFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
              +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+ 
Sbjct: 539  DPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAIL 598

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGE
Sbjct: 599  APVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 658

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R 
Sbjct: 659  SERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEARQ 716

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNI 969
             V ++AATNRPD IDPA+LRPGR D+ L+VG P  TDR  I +   +   K P  +DVN+
Sbjct: 717  QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPTDRLAILKTITKNGTKPPLDADVNL 776

Query: 970  RELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
              +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V+
Sbjct: 777  EAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKVR 836

Query: 1019 PS 1020
             S
Sbjct: 837  SS 838



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 138/241 (57%), Gaps = 14/241 (5%)

Query: 763 REVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
           R +  ++  VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPP
Sbjct: 253 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPP 307

Query: 819 GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
           GC KTL+A A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID
Sbjct: 308 GCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID 367

Query: 879 GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGR 935
            +   R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GR
Sbjct: 368 AITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGR 425

Query: 936 FDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA 995
           FDR + +G P E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A
Sbjct: 426 FDREICLGIPGEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCA 485

Query: 996 I 996
           +
Sbjct: 486 V 486



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P P  RL IL  +        LD++V   ++A       +
Sbjct: 743 TLFV--------------GLPPPTDRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 789 TGADLSALVREASICALRQEMARQKSGN 816


>gi|66806375|ref|XP_636910.1| cell division cycle protein 48 [Dictyostelium discoideum AX4]
 gi|4996891|gb|AAB40928.2| cell division cycle protein 48 [Dictyostelium discoideum]
 gi|60465285|gb|EAL63377.1| cell division cycle protein 48 [Dictyostelium discoideum AX4]
          Length = 793

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/594 (38%), Positives = 333/594 (56%), Gaps = 100/594 (16%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG+ K+   +++++ +         ++G++P KG+LL+GPPG GKT +AR  A+++G  
Sbjct: 204  IGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAF 263

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 264  FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVERRIV 323

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               +
Sbjct: 324  SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------TI 369

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSK 649
            P    RLEI+      M+   LD  V+  ++A  THG+VGADLAALC E+AL C+R    
Sbjct: 370  PDATGRLEIMRIHTKNMK---LDETVDLEAVANETHGYVGADLAALCTESALQCIRE--- 423

Query: 650  IQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL-LSS 708
                 DV+                L+D   S  I       L+S S       T+L LS+
Sbjct: 424  ---KMDVID---------------LEDETISAEI-------LESMSVTQDHFRTALTLSN 458

Query: 709  SLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
               LR TV E+                                       P+   E I  
Sbjct: 459  PSALRETVVEV---------------------------------------PTTTWEDIGG 479

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +  VK E           L E V++P +H E F++ G +P  G+L +GPPGC KTL+A+A
Sbjct: 480  LEGVKRE-----------LRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKA 528

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG-KE 887
            +A+E   NF+++KGPEL + W GESE  VR LF KAR  AP ++FFDE+D +A  RG  +
Sbjct: 529  IANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQ 588

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             D     DRV++Q+L E+DG++ + NV +I ATNRPD IDPA+LRPGR D+L+Y+  P+ 
Sbjct: 589  GDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDL 648

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              R  I +  L K P + DV++  L   ++G +GAD++ IC+ A   AI E+++
Sbjct: 649  PSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIE 702



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 160/268 (59%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++D+GG R+   Q+ E VE P +H + FK IG +PP GIL++GPPGC KT++ARAVA
Sbjct: 198  EVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVA 257

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 258  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQG- 316

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +  P+ T R
Sbjct: 317  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGR 375

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             EI RIH + +     V++  +A  + G  GAD++ +C E+A+  I E +D         
Sbjct: 376  LEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETI 435

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H +TA+    PS + 
Sbjct: 436  SAEILESMSVTQDHFRTALTLSNPSALR 463



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 155/305 (50%), Gaps = 39/305 (12%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL +E    ++ ESM    + F     T + L  P      +LRE  +         V  
Sbjct: 429 DLEDETISAEILESMSVTQDHF----RTALTLSNP-----SALRETVV--------EVPT 471

Query: 405 TVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
           T  +DI  L G+ +E  + + +             G++P+KGVL +GPPG GKT LA+  
Sbjct: 472 TTWEDIGGLEGVKRE--LRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAI 529

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR----K 520
           A++   N  ++ GPE+++  +GESE  + E+FD A Q+AP V+F DELD+IA +R     
Sbjct: 530 ANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQG 589

Query: 521 DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           D G     R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRLD+ I I     
Sbjct: 590 DAG-GAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI----- 643

Query: 581 FSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAA 640
                     +P    R+ IL A L+    +  D ++E+L   T GF GADL  +C  A 
Sbjct: 644 ---------PLPDLPSRVAILKACLNKSPVA-KDVDLEFLGQKTQGFSGADLTEICQRAC 693

Query: 641 LVCLR 645
            + +R
Sbjct: 694 KLAIR 698


>gi|383418685|gb|AFH32556.1| nuclear valosin-containing protein-like isoform 1 [Macaca mulatta]
          Length = 856

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 242/602 (40%), Positives = 333/602 (55%), Gaps = 76/602 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAQVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPGEASRERILQTLCRKLR---LPQ 455

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
              ++  +A  T GFVGADL ALC EAA+  + R         VL                
Sbjct: 456  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNR---------VLMK-------------- 492

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
            LQ+ +                 P   DLP+  +        + SE  D     +      
Sbjct: 493  LQEQE--------------KKDPEMEDLPSKGVQEESLGTESTSETQDELQRLLGLLRDQ 538

Query: 734  MFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
              +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+ 
Sbjct: 539  DPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAIL 598

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGE
Sbjct: 599  APVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 658

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R 
Sbjct: 659  SERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEARQ 716

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNI 969
             V ++AATNRPD IDPA+LRPGR D+ L+VG P  TDR  I +   +   K P  +DVN+
Sbjct: 717  QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPTDRLAILKTITKNGTKPPLDADVNL 776

Query: 970  RELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
              +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V+
Sbjct: 777  EAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKVR 836

Query: 1019 PS 1020
             S
Sbjct: 837  SS 838



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 138/241 (57%), Gaps = 14/241 (5%)

Query: 763 REVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
           R +  ++  VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPP
Sbjct: 253 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPP 307

Query: 819 GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
           GC KTL+A A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID
Sbjct: 308 GCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID 367

Query: 879 GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGR 935
            +   R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GR
Sbjct: 368 AITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATAQVLVIGATNRPDSLDPALRRAGR 425

Query: 936 FDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA 995
           FDR + +G P E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A
Sbjct: 426 FDREICLGIPGEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCA 485

Query: 996 I 996
           +
Sbjct: 486 V 486



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P P  RL IL  +        LD++V   ++A       +
Sbjct: 743 TLFV--------------GLPPPTDRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 789 TGADLSALVREASICALRQEMARQKSGN 816


>gi|348685001|gb|EGZ24816.1| hypothetical protein PHYSODRAFT_554855 [Phytophthora sojae]
          Length = 825

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 241/607 (39%), Positives = 340/607 (56%), Gaps = 61/607 (10%)

Query: 437  SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
            + LG+ P +GVLLHGPPGTGK+ LA   A + G     V+ PEVVS   GESEQ L E+F
Sbjct: 193  AHLGVEPPRGVLLHGPPGTGKSMLAHAIAGECGATFLKVSAPEVVSGMSGESEQKLRELF 252

Query: 497  DSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAA 552
            D A   AP+++FIDE+DAI P R+     + +R+VA LL   D +    T G  V++I A
Sbjct: 253  DEAIARAPSIIFIDEIDAITPKRETSARGMEKRIVAQLLTSADSLSLENTGGKPVVLIGA 312

Query: 553  TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
            TNRPD+++ ALRR GR DREI +               +P    R +IL  L   M    
Sbjct: 313  TNRPDALDSALRRAGRFDREICL--------------GIPDEEAREKILRVLARKM---T 355

Query: 613  LDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRY----SKIQTSSDVLHSTGTLFEF 666
            L+ + ++ ++A  T G+VGADL +L  EAA+  + R     + ++T +  + +T    E 
Sbjct: 356  LEGDFDFAALARRTPGYVGADLVSLTKEAAVGAVNRIFTNINAVKTITAEVDATSVSAET 415

Query: 667  EGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNG 726
            E  SD    D     + T+      +       D P++               AD+    
Sbjct: 416  E-TSDAGTSDDAMEVDATQEKAAEKEKDVEEKKDAPSA---------------ADDLRAQ 459

Query: 727  VSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQ 786
            V       F  E+   L + + DFE A  KV+PS+ RE    +P V W+D+G   EV+ +
Sbjct: 460  VEP-----FTEEQLAPLSITMADFEAAIPKVQPSSKREGFATIPDVTWDDIGALNEVRDE 514

Query: 787  LMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELF 846
            L  AV  P  H E F  +G   P G+L++GPPGC KTL+A+A+A E+G NF+++KGPEL 
Sbjct: 515  LSLAVLQPIAHPERFAALGLSMPAGVLLYGPPGCGKTLLAKAIAHESGANFISIKGPELL 574

Query: 847  SKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR---GKESDGVSVSDRVMSQLLV 903
             K+VGESE++VR +F +ARA++P ++FFDE+D LA  R     +  G  VS+RV++QLL 
Sbjct: 575  DKYVGESERSVRQVFQRARASSPCVVFFDELDALAPRRSSGSGDGGGNGVSERVVNQLLT 634

Query: 904  ELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC 963
            E+DGL  R NV VIAATNRPD IDPA+LRPGR D+LLYV  P  ++R +I +    K   
Sbjct: 635  EMDGLDGRRNVFVIAATNRPDIIDPAMLRPGRLDKLLYVPLPQASERHQILKTICAKCAL 694

Query: 964  SSDVNIRELAC--LSEGCTGADISLICREAAISAIEE----NLDASRITM----QHLKTA 1013
            +  V +  +A     EG +GAD+S + REA I+A+ E     L+A   T+     H  +A
Sbjct: 695  APSVQLEAIAADPRCEGFSGADLSALVREAGITALRETDFSKLEAGATTLGIEHHHFISA 754

Query: 1014 IRHVQPS 1020
               V PS
Sbjct: 755  FDRVFPS 761



 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/235 (40%), Positives = 139/235 (59%), Gaps = 6/235 (2%)

Query: 766 ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
           ++E P  ++ DVGG + +  ++ E +E+P  H E +  +G  PP G+L+ GPPG  K+++
Sbjct: 157 VVERPTTRYSDVGGIQAILQEVRELIEYPLTHPEVYAHLGVEPPRGVLLHGPPGTGKSML 216

Query: 826 ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
           A A+A E G  FL V  PE+ S   GESE+ +R LF +A A APSIIF DEID +   R 
Sbjct: 217 AHAIAGECGATFLKVSAPEVVSGMSGESEQKLRELFDEAIARAPSIIFIDEIDAITPKR- 275

Query: 886 KESDGVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLY 941
            E+    +  R+++QLL   D L         V +I ATNRPD +D AL R GRFDR + 
Sbjct: 276 -ETSARGMEKRIVAQLLTSADSLSLENTGGKPVVLIGATNRPDALDSALRRAGRFDREIC 334

Query: 942 VGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           +G P+E  RE+I R+  RK+    D +   LA  + G  GAD+  + +EAA+ A+
Sbjct: 335 LGIPDEEAREKILRVLARKMTLEGDFDFAALARRTPGYVGADLVSLTKEAAVGAV 389



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/233 (40%), Positives = 135/233 (57%), Gaps = 28/233 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            ++LGL    GVLL+GPPG GKT LA+  AH+SG N  ++ GPE++ +  GESE+++ +V
Sbjct: 529 FAALGLSMPAGVLLYGPPGCGKTLLAKAIAHESGANFISIKGPELLDKYVGESERSVRQV 588

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-----KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           F  A  S+P VVF DELDA+AP R       GG  +S+R+V  LL  MDG+     V VI
Sbjct: 589 FQRARASSPCVVFFDELDALAPRRSSGSGDGGGNGVSERVVNQLLTEMDGLDGRRNVFVI 648

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNRPD I+PA+ RPGRLD+ + + +              P  ++R +IL  + +    
Sbjct: 649 AATNRPDIIDPAMLRPGRLDKLLYVPL--------------PQASERHQILKTICA---K 691

Query: 611 SLLDSEVEYLSMAT----HGFVGADLAALCNEAALVCLRR--YSKIQTSSDVL 657
             L   V+  ++A      GF GADL+AL  EA +  LR   +SK++  +  L
Sbjct: 692 CALAPSVQLEAIAADPRCEGFSGADLSALVREAGITALRETDFSKLEAGATTL 744


>gi|157787079|ref|NP_001099450.1| nuclear valosin-containing protein-like [Rattus norvegicus]
 gi|149040892|gb|EDL94849.1| nuclear VCP-like (predicted) [Rattus norvegicus]
          Length = 855

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 247/641 (38%), Positives = 348/641 (54%), Gaps = 86/641 (13%)

Query: 421  AILKDI---IISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNG 477
            A LK++   +I          LG+ P +GVLLHGPPG GKT LA   A +  + +  V  
Sbjct: 271  ATLKEVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAA 330

Query: 478  PEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNL 537
            PE+VS   GESEQ L ++FD A  +AP +VFIDE+DAI P R+   +++ +R+VA LL  
Sbjct: 331  PEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTC 390

Query: 538  MD---GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP 594
            MD    V  T  VLV+ ATNRPDS++PALRR GR DRE+ +               +P  
Sbjct: 391  MDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCL--------------GIPDE 436

Query: 595  AQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTS 653
            A R  IL  L   +   L ++    +L+  T GFVGADL ALC EAA+  + R       
Sbjct: 437  ASRERILQTLCRKLR--LPETFNFSHLAHLTPGFVGADLMALCREAAVCAVHR------- 487

Query: 654  SDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLR 713
              VL         E  +  +  D +  R+        L +  P  +      L   L  +
Sbjct: 488  --VLMRRQEQQRTEPETGGLPSDGEQGRS--------LGAEPPSETQDELQRLLGLLRDQ 537

Query: 714  GTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVK 773
              +SE                   E+   L LEL DF  A  +V+PSA RE  + VP V 
Sbjct: 538  DPISE-------------------EQMQGLCLELNDFIVALSEVQPSAKREGFVTVPNVT 578

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            W DVG   +++ +L  A+  P ++ E F+ +G   P G+L+ GPPGC KTL+A+AVA+E+
Sbjct: 579  WADVGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANES 638

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            GLNF++VKGPEL + +VGESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV
Sbjct: 639  GLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV 698

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I
Sbjct: 699  --RVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAI 756

Query: 954  FRIHLR---KIPCSSDVNIRELA----CLSEGCTGADISLICREAAISAIEENLDASR-- 1004
             +   +   K P   DV++  +A    C  +  TGAD+S + REA++ A+ + +   +  
Sbjct: 757  LKTITKNGTKPPLDEDVDLEAIANDHRC--DCYTGADLSALVREASLCALRQEITGQKNG 814

Query: 1005 -------ITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHS 1038
                   ++ +H + A R V+PS       +S K QR+  +
Sbjct: 815  IGTAELTVSHKHFEEAFRKVKPS-------ISVKDQRMYEA 848



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 140/241 (58%), Gaps = 14/241 (5%)

Query: 767  LEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            L++  VK+EDVGG     +EV   L+       +H E ++ +G  PP G+L+ GPPGC K
Sbjct: 256  LQISSVKFEDVGGNDATLKEVCKMLIH-----MRHPEVYQHLGVVPPRGVLLHGPPGCGK 310

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL+A A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP I+F DEID +  
Sbjct: 311  TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITP 370

Query: 883  IRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRL 939
             R  E     +  R+++QLL  +D L+       V V+ ATNRPD +DPAL R GRFDR 
Sbjct: 371  KR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDRE 428

Query: 940  LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN 999
            + +G P+E  RE I +   RK+      N   LA L+ G  GAD+  +CREAA+ A+   
Sbjct: 429  VCLGIPDEASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAVHRV 488

Query: 1000 L 1000
            L
Sbjct: 489  L 489



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 141/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      D+  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 564 PSAKREGFVTVPNVTWADVGALEDIREELTMA--ILAPVRNPEQFRALGLVAPAGVLLAG 621

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 622 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 681

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 682 VDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDK 741

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHG----F 627
            + +               +P PA R+ IL  +        LD +V+  ++A       +
Sbjct: 742 TLFV--------------GLPPPADRVAILKTITKNGTKPPLDEDVDLEAIANDHRCDCY 787

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL+AL  EA+L  LR+
Sbjct: 788 TGADLSALVREASLCALRQ 806


>gi|355558734|gb|EHH15514.1| hypothetical protein EGK_01616 [Macaca mulatta]
 gi|380789039|gb|AFE66395.1| nuclear valosin-containing protein-like isoform 1 [Macaca mulatta]
          Length = 856

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 242/602 (40%), Positives = 333/602 (55%), Gaps = 76/602 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPGEASRERILQTLCRKLR---LPQ 455

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
              ++  +A  T GFVGADL ALC EAA+  + R         VL                
Sbjct: 456  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNR---------VLMK-------------- 492

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
            LQ+ +                 P   DLP+  +        + SE  D     +      
Sbjct: 493  LQEQE--------------KKDPEMEDLPSKGVQEESLGTESTSETQDELQRLLGLLRDQ 538

Query: 734  MFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
              +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+ 
Sbjct: 539  DPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAIL 598

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGE
Sbjct: 599  APVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 658

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R 
Sbjct: 659  SERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEARQ 716

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNI 969
             V ++AATNRPD IDPA+LRPGR D+ L+VG P  TDR  I +   +   K P  +DVN+
Sbjct: 717  QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPTDRLAILKTITKNGTKPPLDADVNL 776

Query: 970  RELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
              +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V+
Sbjct: 777  EAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKVR 836

Query: 1019 PS 1020
             S
Sbjct: 837  SS 838



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 138/241 (57%), Gaps = 14/241 (5%)

Query: 763 REVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
           R +  ++  VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPP
Sbjct: 253 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPP 307

Query: 819 GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
           GC KTL+A A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID
Sbjct: 308 GCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID 367

Query: 879 GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGR 935
            +   R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GR
Sbjct: 368 AITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGR 425

Query: 936 FDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA 995
           FDR + +G P E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A
Sbjct: 426 FDREICLGIPGEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCA 485

Query: 996 I 996
           +
Sbjct: 486 V 486



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P P  RL IL  +        LD++V   ++A       +
Sbjct: 743 TLFV--------------GLPPPTDRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 789 TGADLSALVREASICALRQEMARQKSGN 816


>gi|403277420|ref|XP_003930360.1| PREDICTED: nuclear valosin-containing protein-like isoform 1 [Saimiri
            boliviensis boliviensis]
          Length = 855

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 264/721 (36%), Positives = 376/721 (52%), Gaps = 117/721 (16%)

Query: 345  DLTNERSQPQ--VTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNA----QIE 398
            +L++E+S P+  +TE  D + ++ +   E+ +             R+G L N     + +
Sbjct: 189  ELSDEKSNPEKPITEIQDSKESSLL---ESDIK------------RKGRLKNKGSKRKKD 233

Query: 399  FQNVQATVE---QDISKLGGLSKEYAILK-------DIIISSSVK--------STLSSLG 440
             Q V   +E   Q  +K GGL  + + +K       D+ +    K             LG
Sbjct: 234  LQEVDGEIEAVLQKKAKAGGLEFQISNMKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLG 293

Query: 441  LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSAS 500
            + P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ A 
Sbjct: 294  VVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAV 353

Query: 501  QSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNRPD 557
             +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNRPD
Sbjct: 354  SNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPD 413

Query: 558  SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            S++PALRR GR DREI +               +P  A R  IL  L   ++   L    
Sbjct: 414  SLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLK---LPQAF 456

Query: 618  EYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDTML 674
            ++  +A  T GFVGADL ALC EAA+  + R   K+Q                       
Sbjct: 457  DFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ--------------------- 495

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
            Q  D                 P   DLP+  +          SE  D     +       
Sbjct: 496  QKKD-----------------PEIEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQD 538

Query: 735  FMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
             +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+  
Sbjct: 539  PLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILA 598

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGES
Sbjct: 599  PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            E+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  
Sbjct: 659  ERAVRQIFQRAKNSAPCVIFFDEVDALCPRRSDREIGASV--RVVNQLLTEMDGLETRQQ 716

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIR 970
            V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+ 
Sbjct: 717  VFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLE 776

Query: 971  ELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQP 1019
             +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V+ 
Sbjct: 777  AIASDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISNKHFEEAFKKVRS 836

Query: 1020 S 1020
            S
Sbjct: 837  S 837


>gi|383865791|ref|XP_003708356.1| PREDICTED: nuclear valosin-containing protein [Megachile rotundata]
          Length = 930

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 244/651 (37%), Positives = 359/651 (55%), Gaps = 49/651 (7%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
             + +GG  K    +  ++           LG+ P +G LLHGPPG GKT LA   A + G
Sbjct: 272  FTDIGGNDKVLKTVCKLLAHMKHPEIFKQLGISPPRGFLLHGPPGCGKTLLAYAIAGELG 331

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            + L  V  PE+V+   GESE  + E+F+ A   AP V+F+DE+DA+AP R     E+ +R
Sbjct: 332  IPLLKVAAPELVAGVSGESEARIRELFEQALALAPCVIFLDEIDAVAPHRATAQREMERR 391

Query: 530  MVATLLNLMDGVCRTDG---VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +VA LL+ +D +   +    VLV+ ATNRPDS++PALRR GR D E+ +           
Sbjct: 392  IVAQLLSCLDELSLKENGIRVLVLGATNRPDSLDPALRRAGRFDHEVCL----------- 440

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCL 644
                +P    R +IL       E   L   V   ++A  T GFVGADL AL  EAA+  +
Sbjct: 441  ---GIPDRDARAKILAV---HTEKVALAPNVSLSTIASLTPGFVGADLVALIREAAMAAV 494

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
             R  +    S   + +    E    +D   Q+ + S N+ E     ++ ++   +D+P  
Sbjct: 495  DRILEDLNRSVPDNKSPETSEVTNDTDKESQNFENSGNLVEEP--TIEPSTSDQNDVPKL 552

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFM---------SEKGCALKLELVDFEKARM 755
              +S+     T  E+     N  S    G+           SE+  +L +E  DFE A  
Sbjct: 553  DKTSNPDNLQTPLEMDVTQENSKSPDLTGLLTWLRNDPPIPSERLSSLCIEHSDFEAALR 612

Query: 756  KVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMF 815
             ++PSA RE    VP V W+DVG  R+++ +L   +  P +H E F  +G   PTG+L+ 
Sbjct: 613  IIQPSAKREGFATVPDVTWDDVGSLRDIREELQMTILAPVRHSEHFTALGLTTPTGVLLC 672

Query: 816  GPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFD 875
            GPPGC KTL+A+A+A+EAG+NF++VKGPEL + +VGESEKAVR  F +AR +AP +IFFD
Sbjct: 673  GPPGCGKTLLAKAIANEAGINFISVKGPELLNMYVGESEKAVRQCFIRARNSAPCVIFFD 732

Query: 876  EIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGR 935
            E+D L   R  E D  S + RV++Q+L E+DG+  R  V ++AA+NRPD IDPA+LRPGR
Sbjct: 733  ELDALCP-RRSEGDN-SATSRVVNQMLTEMDGVEGRQGVFLMAASNRPDIIDPAVLRPGR 790

Query: 936  FDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELACLS--EGCTGADISLICRE 990
             D++LYV  P   DR +I R   +   K   + DVN+ E+   S  +G TGAD++ + RE
Sbjct: 791  LDKILYVDLPTSADRVDILRALTKNATKPKLAVDVNLEEIGYNSKCDGYTGADLAALIRE 850

Query: 991  AAISAIEENLDAS-----RITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            A I A+ + +D        I+M+H+ +A   ++PS    +I  Y++L   +
Sbjct: 851  AGIEALRDLMDMHYSGQPEISMRHILSAFDKIRPSVQEKDIKHYEKLKKLY 901


>gi|402857093|ref|XP_003893107.1| PREDICTED: nuclear valosin-containing protein-like isoform 2 [Papio
            anubis]
          Length = 750

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 331/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 187  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 246

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 247  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 306

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 307  PDSLDPALRRAGRFDREICL--------------GIPGEASRERILQTLCRKLR---LPQ 349

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 350  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRGLMKLQEQ------------------- 390

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                               +   P   DLP+  +        + SE  D     +     
Sbjct: 391  -------------------EKKDPEMEDLPSKGVQEESLGTESTSETQDELQRLLGLLRD 431

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 432  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 491

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 492  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 551

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 552  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 609

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P  TDR  I +   +   K P  +DVN
Sbjct: 610  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPTDRLAILKTITKNGTKPPLDADVN 669

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V
Sbjct: 670  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKV 729

Query: 1018 QPS 1020
            + S
Sbjct: 730  RSS 732



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/263 (40%), Positives = 147/263 (55%), Gaps = 14/263 (5%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
            L+ VD E   +  + +  R +  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 129  LQEVDGEIEAVLQKKTKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 183

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
            +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 184  YHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 243

Query: 861  FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
            F +A +NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 244  FEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 301

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
             ATNRPD +DPAL R GRFDR + +G P E  RE I +   RK+      +   LA L+ 
Sbjct: 302  GATNRPDSLDPALRRAGRFDREICLGIPGEASRERILQTLCRKLRLPQAFDFCHLAHLTP 361

Query: 978  GCTGADISLICREAAISAIEENL 1000
            G  GAD+  +CREAA+ A+   L
Sbjct: 362  GFVGADLMALCREAAMCAVNRGL 384



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 459 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 516

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 517 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 576

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 577 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 636

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P P  RL IL  +        LD++V   ++A       +
Sbjct: 637 TLFV--------------GLPPPTDRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 682

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 683 TGADLSALVREASICALRQEMARQKSGN 710


>gi|402857095|ref|XP_003893108.1| PREDICTED: nuclear valosin-containing protein-like isoform 3 [Papio
            anubis]
          Length = 765

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 331/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 202  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 261

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 262  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 321

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 322  PDSLDPALRRAGRFDREICL--------------GIPGEASRERILQTLCRKLR---LPQ 364

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 365  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRGLMKLQEQ------------------- 405

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                               +   P   DLP+  +        + SE  D     +     
Sbjct: 406  -------------------EKKDPEMEDLPSKGVQEESLGTESTSETQDELQRLLGLLRD 446

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 447  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 506

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 507  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 566

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 567  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 624

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P  TDR  I +   +   K P  +DVN
Sbjct: 625  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPTDRLAILKTITKNGTKPPLDADVN 684

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V
Sbjct: 685  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKV 744

Query: 1018 QPS 1020
            + S
Sbjct: 745  RSS 747



 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/263 (40%), Positives = 147/263 (55%), Gaps = 14/263 (5%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
            L+ VD E   +  + +  R +  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 144  LQEVDGEIEAVLQKKTKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 198

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
            +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 199  YHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 258

Query: 861  FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
            F +A +NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 259  FEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 316

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
             ATNRPD +DPAL R GRFDR + +G P E  RE I +   RK+      +   LA L+ 
Sbjct: 317  GATNRPDSLDPALRRAGRFDREICLGIPGEASRERILQTLCRKLRLPQAFDFCHLAHLTP 376

Query: 978  GCTGADISLICREAAISAIEENL 1000
            G  GAD+  +CREAA+ A+   L
Sbjct: 377  GFVGADLMALCREAAMCAVNRGL 399



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 474 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 531

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 532 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 591

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 592 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 651

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P P  RL IL  +        LD++V   ++A       +
Sbjct: 652 TLFV--------------GLPPPTDRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 697

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 698 TGADLSALVREASICALRQEMARQKSGN 725


>gi|109018127|ref|XP_001096523.1| PREDICTED: nuclear VCP-like isoform 3 [Macaca mulatta]
          Length = 750

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 331/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 187  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 246

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 247  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 306

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 307  PDSLDPALRRAGRFDREICL--------------GIPGEASRERILQTLCRKLR---LPQ 349

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 350  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ------------------- 390

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                               +   P   DLP+  +        + SE  D     +     
Sbjct: 391  -------------------EKKDPEMEDLPSKGVQEESLGTESTSETQDELQRLLGLLRD 431

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 432  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 491

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 492  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 551

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 552  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 609

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P  TDR  I +   +   K P  +DVN
Sbjct: 610  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPTDRLAILKTITKNGTKPPLDADVN 669

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V
Sbjct: 670  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKV 729

Query: 1018 QPS 1020
            + S
Sbjct: 730  RSS 732



 Score =  180 bits (457), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 138/241 (57%), Gaps = 14/241 (5%)

Query: 763 REVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
           R +  ++  VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPP
Sbjct: 147 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPP 201

Query: 819 GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
           GC KTL+A A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID
Sbjct: 202 GCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID 261

Query: 879 GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGR 935
            +   R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GR
Sbjct: 262 AITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGR 319

Query: 936 FDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA 995
           FDR + +G P E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A
Sbjct: 320 FDREICLGIPGEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCA 379

Query: 996 I 996
           +
Sbjct: 380 V 380



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 459 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 516

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 517 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 576

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 577 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 636

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P P  RL IL  +        LD++V   ++A       +
Sbjct: 637 TLFV--------------GLPPPTDRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 682

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 683 TGADLSALVREASICALRQEMARQKSGN 710


>gi|242767242|ref|XP_002341331.1| AAA family ATPase/60S ribosome export protein Rix7, putative
            [Talaromyces stipitatus ATCC 10500]
 gi|218724527|gb|EED23944.1| AAA family ATPase/60S ribosome export protein Rix7, putative
            [Talaromyces stipitatus ATCC 10500]
          Length = 740

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 239/629 (37%), Positives = 349/629 (55%), Gaps = 80/629 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGG+ +    L D+II    +  + +S  ++P +GVLLHGPPG GKT LA   A D 
Sbjct: 173  LSDLGGMDEVLQELGDLIILPMTRPQIFTSSKVQPPRGVLLHGPPGCGKTMLANAFAADL 232

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV   +++ P VVS   GESE+AL E FD A + AP ++FIDE+DAI P R+    E+ +
Sbjct: 233  GVPFISISAPSVVSGMSGESEKALREHFDEAKKVAPCLIFIDEIDAITPKRESAQREMEK 292

Query: 529  RMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  MD +   +T+G  V+V+AATNRPDS++PALRR GR D+EI +         
Sbjct: 293  RIVAQLLTCMDDLALEKTNGKPVIVLAATNRPDSLDPALRRGGRFDKEINL--------- 343

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VPS   R +IL  L   M+ +  D + + L+  T GFVGADL  L + A    +
Sbjct: 344  -----TVPSEPVREQILRTLTRKMQLAD-DLDFQTLAKRTAGFVGADLNDLVSTAGAAAI 397

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSA-SPCTSDLPT 703
            +RY ++  ++     TG   + EG ++      D +  + E  R    +  +P   +   
Sbjct: 398  KRYLELLKAN-----TGEEMDIEGETE-----QDLTEKVKEIRRLIKHAKEAPMGQETNP 447

Query: 704  SLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMR 763
             L+S++                                       DF  A  K++PS+ R
Sbjct: 448  VLVSNA---------------------------------------DFFTALPKIQPSSKR 468

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E    +P   W D+G    ++ +L+ AV  P K+ E + ++G   PTG+L++GPPGC KT
Sbjct: 469  EGFATIPDTTWADIGALGGIRDELVTAVVDPIKNPEIYAKVGITAPTGVLLWGPPGCGKT 528

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F +AR++ P +IFFDE+D L   
Sbjct: 529  LLAKAVANESRANFISIKGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDELDALVPR 588

Query: 884  RGKESDGVSVSD-RVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLY 941
            R    D +S S  RV++ LL ELDGL   R  + +IAATNRPD IDPA+LRPGR + LL+
Sbjct: 589  R---DDALSESSARVVNTLLTELDGLGSNRQGIYIIAATNRPDIIDPAMLRPGRLETLLF 645

Query: 942  VGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
            V  P  ++R EI    +R +P   +  +R LA   EG +GADI  + R A  SAI+    
Sbjct: 646  VNLPGPSERAEILETLVRNLPIEFNDQMRTLAESCEGYSGADIGSLLRRAGYSAIKRR-- 703

Query: 1002 ASRITMQHLKTAIRHVQPS--EIHSYKEL 1028
               I  +    A  H++PS  ++  Y+ L
Sbjct: 704  -DMIRFEDFVAAKEHIRPSVTDMRKYERL 731



 Score =  163 bits (413), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 155/294 (52%), Gaps = 28/294 (9%)

Query: 359 MDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSK 418
           M  E+N  ++++       P +   SK  REG        F  +  T   DI  LGG+  
Sbjct: 441 MGQETNPVLVSNADFFTALPKIQPSSK--REG--------FATIPDTTWADIGALGGIRD 490

Query: 419 EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGP 478
           E  ++  ++         + +G+    GVLL GPPG GKT LA+  A++S  N  ++ GP
Sbjct: 491 E--LVTAVVDPIKNPEIYAKVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISIKGP 548

Query: 479 EVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLM 538
           E++++  GESE+A+ +VF  A  S P V+F DELDA+ P R D   E S R+V TLL  +
Sbjct: 549 ELLNKYVGESERAVRQVFVRARSSIPCVIFFDELDALVPRRDDALSESSARVVNTLLTEL 608

Query: 539 DGV-CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQR 597
           DG+     G+ +IAATNRPD I+PA+ RPGRL+       + LF  L       P P++R
Sbjct: 609 DGLGSNRQGIYIIAATNRPDIIDPAMLRPGRLE-------TLLFVNL-------PGPSER 654

Query: 598 LEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            EIL  L+  +     D ++  L+ +  G+ GAD+ +L   A    ++R   I+
Sbjct: 655 AEILETLVRNLPIEFND-QMRTLAESCEGYSGADIGSLLRRAGYSAIKRRDMIR 707



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 139/234 (59%), Gaps = 6/234 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V   D+GG  EV  +L + +  P    + F     +PP G+L+ GPPGC KT++A A A+
Sbjct: 171  VSLSDLGGMDEVLQELGDLIILPMTRPQIFTSSKVQPPRGVLLHGPPGCGKTMLANAFAA 230

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            + G+ F+++  P + S   GESEKA+R  F +A+  AP +IF DEID +   R  ES   
Sbjct: 231  DLGVPFISISAPSVVSGMSGESEKALREHFDEAKKVAPCLIFIDEIDAITPKR--ESAQR 288

Query: 892  SVSDRVMSQLLVELDGLH-QRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++QLL  +D L  ++ N   V V+AATNRPD +DPAL R GRFD+ + +  P+E
Sbjct: 289  EMEKRIVAQLLTCMDDLALEKTNGKPVIVLAATNRPDSLDPALRRGGRFDKEINLTVPSE 348

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              RE+I R   RK+  + D++ + LA  + G  GAD++ +   A  +AI+  L+
Sbjct: 349  PVREQILRTLTRKMQLADDLDFQTLAKRTAGFVGADLNDLVSTAGAAAIKRYLE 402


>gi|297280699|ref|XP_001096285.2| PREDICTED: nuclear VCP-like isoform 1 [Macaca mulatta]
          Length = 765

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 331/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 202  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 261

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 262  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 321

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 322  PDSLDPALRRAGRFDREICL--------------GIPGEASRERILQTLCRKLR---LPQ 364

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 365  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ------------------- 405

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                               +   P   DLP+  +        + SE  D     +     
Sbjct: 406  -------------------EKKDPEMEDLPSKGVQEESLGTESTSETQDELQRLLGLLRD 446

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 447  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 506

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 507  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 566

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 567  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 624

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P  TDR  I +   +   K P  +DVN
Sbjct: 625  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPTDRLAILKTITKNGTKPPLDADVN 684

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V
Sbjct: 685  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKV 744

Query: 1018 QPS 1020
            + S
Sbjct: 745  RSS 747



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 138/241 (57%), Gaps = 14/241 (5%)

Query: 763 REVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
           R +  ++  VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPP
Sbjct: 162 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPP 216

Query: 819 GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
           GC KTL+A A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID
Sbjct: 217 GCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID 276

Query: 879 GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGR 935
            +   R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GR
Sbjct: 277 AITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGR 334

Query: 936 FDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA 995
           FDR + +G P E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A
Sbjct: 335 FDREICLGIPGEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCA 394

Query: 996 I 996
           +
Sbjct: 395 V 395



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 474 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 531

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 532 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 591

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 592 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 651

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P P  RL IL  +        LD++V   ++A       +
Sbjct: 652 TLFV--------------GLPPPTDRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 697

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 698 TGADLSALVREASICALRQEMARQKSGN 725


>gi|449457301|ref|XP_004146387.1| PREDICTED: cell division control protein 48 homolog C-like [Cucumis
            sativus]
          Length = 816

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/629 (37%), Positives = 337/629 (53%), Gaps = 115/629 (18%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+RP  G+LLHGPPG GKT LA   A+++GV  + ++  E++S   G SE+ + E+F  
Sbjct: 267  LGVRPMAGILLHGPPGCGKTKLAHAIANETGVPFYKISATEIMSGVSGASEENIRELFSK 326

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV----------------- 541
            A ++AP++VFIDE+DAIA  R++   E+ +R+V  L+  MDG                  
Sbjct: 327  AYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTCMDGFHKLVDSKDASSKDDNSN 386

Query: 542  CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEIL 601
             R   VLVI ATNRPD+++PALRRPGR DREI +               VP    R EIL
Sbjct: 387  VRPGYVLVIGATNRPDAVDPALRRPGRFDREIVL--------------GVPDENARAEIL 432

Query: 602  HALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHS 659
              L S +    L+   + L +A  T GFVGADL AL N+A  + ++R             
Sbjct: 433  TVLTSNLR---LEGSFDLLKIARATPGFVGADLTALANKAGNLAMKR------------- 476

Query: 660  TGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEI 719
                         ++    C     E S DC                             
Sbjct: 477  -------------IIDQRKC-----ELSTDC----------------------------- 489

Query: 720  ADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG 779
            A N H  + D     ++ E+   L + ++DFE+A   V+PS  RE    +P VKWEDVGG
Sbjct: 490  AANEH--IEDWWRQPWLPEEMEKLAITMIDFEEAIQMVQPSLRREGFSAIPSVKWEDVGG 547

Query: 780  QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLA 839
              +++ +    V    K+ E ++  G    TG L++GPPGC KTL+A+AVA+EAG NF+ 
Sbjct: 548  LEQLRAEFDRYVVRRVKYPEDYEGFGVDLATGFLLYGPPGCGKTLIAKAVANEAGANFIH 607

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMS 899
            +KGPEL +K+VGESE AVR+LF++AR  +P I+FFDE+D L   RGKE  G  V +R+++
Sbjct: 608  IKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--GGWVVERLLN 665

Query: 900  QLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR 959
            QLL+ELDG  QR  V VI ATNRP+ IDPA+LRPGRF +LLYV  P  T+R  + +   R
Sbjct: 666  QLLIELDGAEQRRGVFVIGATNRPEVIDPAILRPGRFGKLLYVPLPGPTERGLVLKALGR 725

Query: 960  KIPCSSDVNIRELACLS--EGCTGADISLICREAAISAIEENLD---------ASRITMQ 1008
            K P    V++  +  +   E  +GAD++ +  EAA++A+EE L          +  I M 
Sbjct: 726  KKPIDVSVDLLAIGQMEACENFSGADLAALMNEAAMAALEEKLTLDNSNIESASCTIKMV 785

Query: 1009 HLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            H +  +  + PS    + H Y+ LS   +
Sbjct: 786  HFERGLTKISPSVSEKQKHFYEILSKSLK 814



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 143/262 (54%), Gaps = 19/262 (7%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            ++D+GG + V  +L   V  P  H +    +G RP  GIL+ GPPGC KT +A A+A+E 
Sbjct: 237  FKDLGGMKSVLDELKMEVIVPLYHPQVPLWLGVRPMAGILLHGPPGCGKTKLAHAIANET 296

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            G+ F  +   E+ S   G SE+ +R LF+KA   APSI+F DEID +A+ R  E+    +
Sbjct: 297  GVPFYKISATEIMSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 354

Query: 894  SDRVMSQLLVELDGLHQRVN-----------------VTVIAATNRPDKIDPALLRPGRF 936
              R+++QL+  +DG H+ V+                 V VI ATNRPD +DPAL RPGRF
Sbjct: 355  EKRIVTQLMTCMDGFHKLVDSKDASSKDDNSNVRPGYVLVIGATNRPDAVDPALRRPGRF 414

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + +G P+E  R EI  +    +      ++ ++A  + G  GAD++ +  +A   A+
Sbjct: 415  DREIVLGVPDENARAEILTVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGNLAM 474

Query: 997  EENLDASRITMQHLKTAIRHVQ 1018
            +  +D  +  +     A  H++
Sbjct: 475  KRIIDQRKCELSTDCAANEHIE 496



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 145/299 (48%), Gaps = 41/299 (13%)

Query: 352 QPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDIS 411
           QP + E M+  +   +   E    + P L       REG        F  + +   +D+ 
Sbjct: 501 QPWLPEEMEKLAITMIDFEEAIQMVQPSLR------REG--------FSAIPSVKWEDVG 546

Query: 412 KLGGLSKEYAILKDIIISSSVK--STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            L  L  E+    D  +   VK        G+    G LL+GPPG GKT +A+  A+++G
Sbjct: 547 GLEQLRAEF----DRYVVRRVKYPEDYEGFGVDLATGFLLYGPPGCGKTLIAKAVANEAG 602

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            N   + GPE++++  GESE A+  +F  A   +P ++F DE+DA+   R   G  + +R
Sbjct: 603 ANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVER 662

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++  LL  +DG  +  GV VI ATNRP+ I+PA+ RPGR  + + + +            
Sbjct: 663 LLNQLLIELDGAEQRRGVFVIGATNRPEVIDPAILRPGRFGKLLYVPL------------ 710

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM----ATHGFVGADLAALCNEAALVCL 644
             P P +R  +L AL        +D  V+ L++    A   F GADLAAL NEAA+  L
Sbjct: 711 --PGPTERGLVLKAL---GRKKPIDVSVDLLAIGQMEACENFSGADLAALMNEAAMAAL 764


>gi|403277422|ref|XP_003930361.1| PREDICTED: nuclear valosin-containing protein-like isoform 2 [Saimiri
            boliviensis boliviensis]
          Length = 764

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 256/676 (37%), Positives = 356/676 (52%), Gaps = 100/676 (14%)

Query: 388  REGTLPNA----QIEFQNVQATVE---QDISKLGGLSKEYAILK-------DIIISSSVK 433
            R+G L N     + + Q V   +E   Q  +K GGL  + + +K       D+ +    K
Sbjct: 128  RKGRLKNKGSKRKKDLQEVDGEIEAVLQKKAKAGGLEFQISNMKFEDVGGNDMTLKEVCK 187

Query: 434  --------STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNY 485
                         LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   
Sbjct: 188  MLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVS 247

Query: 486  GESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVC 542
            GESEQ L E+F+ A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V 
Sbjct: 248  GESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVA 307

Query: 543  RTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILH 602
             T  VLVI ATNRPDS++PALRR GR DREI +               +P  A R  IL 
Sbjct: 308  ATARVLVIGATNRPDSLDPALRRAGRFDREICL--------------GIPDEASRERILQ 353

Query: 603  ALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHS 659
             L   ++   L    ++  +A  T GFVGADL ALC EAA+  + R   K+Q        
Sbjct: 354  TLCRKLK---LPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ------ 404

Query: 660  TGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEI 719
                           Q  D                 P   DLP+  +          SE 
Sbjct: 405  ---------------QKKD-----------------PEIEDLPSKGVQEERLGTEPTSET 432

Query: 720  ADNFHNGVSDSSGGMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVG 778
             D     +        +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G
Sbjct: 433  QDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIG 492

Query: 779  GQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFL 838
               +++ +L  A+  P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF+
Sbjct: 493  ALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 552

Query: 839  AVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVM 898
            +VKGPEL + +VGESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV+
Sbjct: 553  SVKGPELLNMYVGESERAVRQIFQRAKNSAPCVIFFDEVDALCPRRSDREIGASV--RVV 610

Query: 899  SQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            +QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   
Sbjct: 611  NQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTIT 670

Query: 959  R---KIPCSSDVNIRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------R 1004
            +   K P  +DVN+  +A  L   C TGAD+S + REA+I A+ + +            +
Sbjct: 671  KNGTKPPLDADVNLEAIASDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELK 730

Query: 1005 ITMQHLKTAIRHVQPS 1020
            I+ +H + A + V+ S
Sbjct: 731  ISNKHFEEAFKKVRSS 746


>gi|151553618|gb|AAI48920.1| NVL protein [Bos taurus]
          Length = 773

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/600 (39%), Positives = 337/600 (56%), Gaps = 67/600 (11%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V   E+VS   GESEQ L E+F+ 
Sbjct: 205  LGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQ 264

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 265  AVSSAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 324

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +   L ++
Sbjct: 325  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR--LPET 368

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
                +L+  T GFVGADL ALC EAA+  + R                L E +G      
Sbjct: 369  FHFRHLAHLTPGFVGADLMALCREAAMCAVNR---------------VLMELQGQHK--- 410

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
            ++ +   + +E  ++    A P +        +  LP++  +  +     N    S    
Sbjct: 411  KNPEIEASPSEGDQEERTGAEPTSK-------TQVLPIQEELQRLLGLLRNQDPLSE--- 460

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
               E+   L +EL DF  A   V+PSA RE    VP V W D+G   +++ +L  A+  P
Sbjct: 461  ---EQLKGLCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAILAP 517

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
             ++ + F+ +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE
Sbjct: 518  VRNPDQFRALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 577

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNV 914
            +AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V
Sbjct: 578  RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASV--RVVNQLLTEMDGLETRQQV 635

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRE 971
             ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+  
Sbjct: 636  FIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEA 695

Query: 972  LAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQPS 1020
            +A  L   C TGAD+S + REA+I A+++ +            +I+ +H + A + V+ S
Sbjct: 696  IAGDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKISQKHFEEAFKKVKSS 755



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/303 (38%), Positives = 161/303 (53%), Gaps = 17/303 (5%)

Query: 724  HNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREV 783
              G  +S GG    E      L+ VD E   +  + +  + + L++  VK+EDVGG    
Sbjct: 131  RKGKLNSKGGKKKKED-----LQEVDGEIEAVLQKRAKAKGLELQISSVKFEDVGGN--- 182

Query: 784  KTQLMEAVEW--PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVK 841
             T L E  +     +H E +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V 
Sbjct: 183  DTTLKEVCKMLVHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVA 242

Query: 842  GPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQL 901
              E+ S   GESE+ +R LF +A ++AP I+F DEID +   R  E     +  R+++QL
Sbjct: 243  ATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKR--EIASKDMERRIVAQL 300

Query: 902  LVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            L  +D L+       V VI ATNRPD +DPAL R GRFDR + +G P+E  RE I +   
Sbjct: 301  LTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLC 360

Query: 959  RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            RK+      + R LA L+ G  GAD+  +CREAA+ A+   L    +  QH K       
Sbjct: 361  RKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNRVL--MELQGQHKKNPEIEAS 418

Query: 1019 PSE 1021
            PSE
Sbjct: 419  PSE 421



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 142/266 (53%), Gaps = 21/266 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 482 PSAKREGFATVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFRALGLVTPAGVLLAG 539

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 540 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 599

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R       S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 600 VDALCPRRSARETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 659

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 660 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 705

Query: 628 VGADLAALCNEAALVCLRRYSKIQTS 653
            GADL+AL  EA++  L++    Q S
Sbjct: 706 TGADLSALVREASICALKQEMARQKS 731


>gi|401886392|gb|EJT50430.1| helicase [Trichosporon asahii var. asahii CBS 2479]
          Length = 730

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 252/667 (37%), Positives = 362/667 (54%), Gaps = 94/667 (14%)

Query: 400  QNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSL-GLRPTKGVLLHGPPGTGKT 458
            +N  A  E  +S+LGGL K+   L +I+    +   + S  G+    GVLLHG PG GKT
Sbjct: 80   ENKYAPPEARLSQLGGLDKQIKQLLEIVALPLLHPEIYSFTGITRPHGVLLHGVPGGGKT 139

Query: 459  SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
             L    A    +   T++ P +VS   GESE+AL E FD A + AP ++F+DE+DAI P 
Sbjct: 140  QLVHCLAGQLQLPFITISAPSIVSGMSGESERALREHFDEAKRHAPCILFLDEVDAITPK 199

Query: 519  RKDGGEELSQRMVATLLNLMDGVCRTDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
            R+    E+ +R+VA LL  MD +  +D  V+++ ATNRPDSI+PALRR GR D EIE+  
Sbjct: 200  RETAQREMERRIVAQLLTCMDDLAGSDKPVIMLGATNRPDSIDPALRRAGRFDHEIEM-- 257

Query: 578  SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                         VP+   R +IL  LL  ++ +  + ++ +L+ +T G+VGADL +L  
Sbjct: 258  ------------GVPTVEGREQILRVLLQNLKLAP-EVDIRWLAKSTPGYVGADLTSLTT 304

Query: 638  EAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPC 697
            EA +V ++R                   FE  +  + Q+     N+       LD     
Sbjct: 305  EAGVVAVKRI------------------FETMAGPVSQEV-AMENM------ALDDGP-- 337

Query: 698  TSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKV 757
             + LP+ ++++          IA    N       G   +E+   L L   DF+ A   V
Sbjct: 338  MAQLPSGVMATP---------IAQFLAN-----HPGPLGAEQLGQLVLLPSDFDAALKVV 383

Query: 758  RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
            +PSA RE    VP V W D+G    V+ +L  AV  P +H E F  +G   P+G+L++GP
Sbjct: 384  QPSAKREGFATVPDVTWADIGALGNVRDELHMAVVQPIRHPELFSVVGIDAPSGVLLWGP 443

Query: 818  PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
            PGC KTL+A+AVA+E+  NF++VKGPEL +K+VGESE+AVR +FA+ARA+AP +IFFDE+
Sbjct: 444  PGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFARARASAPCVIFFDEL 503

Query: 878  DGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            D L   R    D +S S  RV++ LL ELDGL  R  V VI ATNRPD IDPA++RPGR 
Sbjct: 504  DALVPRR---DDSMSESSARVVNTLLTELDGLDARKAVYVIGATNRPDMIDPAMVRPGRL 560

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL-----SEGCTGADISLICREA 991
            D+LLYV  P+  +R E+ R H ++ P + + +   +A L      +G +GADI+ + REA
Sbjct: 561  DKLLYVDLPSPAERLEVLRTHTKRTPIAEE-DWAAIAALVNSDACDGFSGADIAALVREA 619

Query: 992  ----------AISAIEENLD----ASRITM--------QHLKTAIRHVQPS----EIHSY 1025
                      AI A E + D       +TM        +H   A +  QPS    + H Y
Sbjct: 620  ASLALRSALEAIGAFENDADRGSRGGEVTMAPQVNVSAEHFAKAAQKTQPSVSREQRHKY 679

Query: 1026 KELSAKF 1032
            + +  K+
Sbjct: 680  ERMRDKY 686



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/257 (41%), Positives = 143/257 (55%), Gaps = 20/257 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  LG +  E  +   ++         S +G+    GVLL G
Sbjct: 385 PSAKREGFATVPDVTWADIGALGNVRDELHMA--VVQPIRHPELFSVVGIDAPSGVLLWG 442

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++S  N  +V GPE++++  GESE+A+ +VF  A  SAP V+F DE
Sbjct: 443 PPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFARARASAPCVIFFDE 502

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           LDA+ P R D   E S R+V TLL  +DG+     V VI ATNRPD I+PA+ RPGRLD+
Sbjct: 503 LDALVPRRDDSMSESSARVVNTLLTELDGLDARKAVYVIGATNRPDMIDPAMVRPGRLDK 562

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD-SEVEYL--SMATHGFV 628
            + +D+              PSPA+RLE+L         +  D + +  L  S A  GF 
Sbjct: 563 LLYVDL--------------PSPAERLEVLRTHTKRTPIAEEDWAAIAALVNSDACDGFS 608

Query: 629 GADLAALCNEAALVCLR 645
           GAD+AAL  EAA + LR
Sbjct: 609 GADIAALVREAASLALR 625


>gi|71005554|ref|XP_757443.1| hypothetical protein UM01296.1 [Ustilago maydis 521]
 gi|46096926|gb|EAK82159.1| hypothetical protein UM01296.1 [Ustilago maydis 521]
          Length = 878

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 262/735 (35%), Positives = 378/735 (51%), Gaps = 115/735 (15%)

Query: 410  ISKLGGLSKEY-AILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGG+S     IL+ I +        +  G++P +GVLLHGPPG GKT LA   A + 
Sbjct: 150  LADLGGISHAIEKILELIAMPLCHPEIYAHTGVKPPRGVLLHGPPGCGKTMLAGAVAGEL 209

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV   +++ P VVS   GESE+ + + FD A+  AP ++FIDE+DAI P R+    E+ +
Sbjct: 210  GVPFLSISAPSVVSGTSGESEKTIRDTFDEAASIAPCILFIDEIDAITPKRETAQREMER 269

Query: 529  RMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  +D +   +TDG  V++I ATNRPDS++PALRR GR D EI +         
Sbjct: 270  RIVAQLLTSLDDLSWEKTDGKPVMIIGATNRPDSLDPALRRAGRFDHEIAM--------- 320

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VP    R +IL  L   +  +  D +   L+ +T G+VGADL AL + A ++ +
Sbjct: 321  -----GVPDEDGREQILRVLAQKLRLAG-DFDFRALAKSTPGYVGADLTALTSAAGIIAV 374

Query: 645  RRYSKIQTSSDVLHSTGTLFEFE-----------------GHSDTMLQDSDCSR------ 681
            +R  +  + SD L S+ +                      G +D  + DS  S       
Sbjct: 375  KRIFQQLSESDSLPSSLSAARISQAIGLNTSDGQQDAAASGEADVEMGDSGDSNFPPASA 434

Query: 682  --NITESSRDCLDS------------------ASPCTSD-------LPTSLLSSSLPLRG 714
                +++ +D  DS                   +P T+D       +PT   SS++    
Sbjct: 435  SQAASDAVQDIPDSEIVVRSTAIDTPGSSKGAVTPATADEDGTLTSVPTVAASSNVRPSA 494

Query: 715  TVSEIADNFHNGVSDSSGGMFMSEKG--------CALKLELVDFEKARMKVRPSAMREVI 766
            T     D     + DSS   F+              L +   DF  A   V+PS+ RE  
Sbjct: 495  T---FFDALPEHIRDSSIASFLKNHPSPLTEAQLAPLAITNADFLVALPSVQPSSKREGF 551

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
              VP V W DVG     + +L  A+  P K  E F+ +G    +G+L++GPPGC KTL+A
Sbjct: 552  ATVPDVSWADVGALHSTRDELSMAIVEPIKRPELFRSVGVSASSGVLLWGPPGCGKTLLA 611

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+E+  NF++VKGPEL +K+VGESEKAVR +FA+AR ++P +IFFDE+D L   R  
Sbjct: 612  KAVANESRANFISVKGPELLNKYVGESEKAVRQVFARARTSSPCVIFFDELDALVPRR-- 669

Query: 887  ESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              D +S  S RV++ LL ELDGL  RV   VIAATNRPD IDPA+ RPGR D+LLYV  P
Sbjct: 670  -DDSLSESSSRVVNTLLTELDGLESRVQTYVIAATNRPDMIDPAMCRPGRLDKLLYVDLP 728

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLS--EGCTGADISLICREAAISAIEENL--- 1000
               +R EI +    K P S +VN++ +AC    EG +GAD++ + REAA+ A+ E +   
Sbjct: 729  KPDERYEILKTITSKTPLSDEVNLQTIACDDKLEGFSGADLAALVREAAVLALRETILFH 788

Query: 1001 -------------------DASRITMQ--HLKTAIRHVQPS----EIHSYKELSAKFQRL 1035
                               +  ++T+   H   A+  +QPS    +   Y  L  K Q  
Sbjct: 789  NSQPGTVASQAKKSNKGEHERVKVTVMHSHFVAALSKIQPSVSAQQRRKYLSLRMKLQGS 848

Query: 1036 VHSNAEADESGYQLR 1050
            V  +A +  +G + R
Sbjct: 849  VPIDAASGGNGRRAR 863



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 134/232 (57%), Gaps = 6/232 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG      +++E +  P  H E +   G +PP G+L+ GPPGC KT++A AV
Sbjct: 146 PATRLADLGGISHAIEKILELIAMPLCHPEIYAHTGVKPPRGVLLHGPPGCGKTMLAGAV 205

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ FL++  P + S   GESEK +R  F +A + AP I+F DEID +   R  E+ 
Sbjct: 206 AGELGVPFLSISAPSVVSGTSGESEKTIRDTFDEAASIAPCILFIDEIDAITPKR--ETA 263

Query: 890 GVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++QLL  LD L         V +I ATNRPD +DPAL R GRFD  + +G P
Sbjct: 264 QREMERRIVAQLLTSLDDLSWEKTDGKPVMIIGATNRPDSLDPALRRAGRFDHEIAMGVP 323

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           +E  RE+I R+  +K+  + D + R LA  + G  GAD++ +   A I A++
Sbjct: 324 DEDGREQILRVLAQKLRLAGDFDFRALAKSTPGYVGADLTALTSAAGIIAVK 375


>gi|296229991|ref|XP_002760518.1| PREDICTED: nuclear valosin-containing protein-like isoform 1
            [Callithrix jacchus]
          Length = 856

 Score =  385 bits (988), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 331/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVASTARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 455

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 456  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ------------------- 496

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
              Q  D                 P   DLP+  +         +SE  D     +     
Sbjct: 497  --QKKD-----------------PEMDDLPSKGVQEERLGTEPISETQDELQRLLGLLRD 537

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 538  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 597

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 598  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 657

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 658  ESERAVRQIFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLETR 715

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 716  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 775

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA++ A+ + +            +I+ +H + A + V
Sbjct: 776  LEAIAGDLRCDCYTGADLSALVREASVCALRQEMARQKSGNEKGELKISHKHFEEAFKKV 835

Query: 1018 QPS 1020
            + S
Sbjct: 836  RSS 838



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 136/237 (57%), Gaps = 14/237 (5%)

Query: 767 LEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
             +  VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPPGC K
Sbjct: 257 FRISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGK 311

Query: 823 TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
           TL+A A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID +  
Sbjct: 312 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITP 371

Query: 883 IRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR 
Sbjct: 372 KR--EVASKDMERRIVAQLLTCMDDLNNVASTARVLVIGATNRPDSLDPALRRAGRFDRE 429

Query: 940 LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           + +G P+E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+
Sbjct: 430 ICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 486



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ ++F  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQIFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 743 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 789 TGADLSALVREASVCALRQEMARQKSGN 816


>gi|332251955|ref|XP_003275117.1| PREDICTED: nuclear valosin-containing protein-like isoform 1
            [Nomascus leucogenys]
          Length = 855

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 241/603 (39%), Positives = 330/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 292  LGVVPPRGVLLHGPPGCGKTLLANAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 351

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 352  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 411

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 412  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 454

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRY-SKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 455  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ------------------- 495

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
              Q  D                 P   DLP+  +          SE  D     +     
Sbjct: 496  --QKKD-----------------PEMEDLPSKEVQEERLGTEPTSETQDELQRLLGLLRD 536

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 537  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 596

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 597  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 656

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 657  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 714

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 715  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 774

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V
Sbjct: 775  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKV 834

Query: 1018 QPS 1020
            + S
Sbjct: 835  RSS 837



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/259 (41%), Positives = 148/259 (57%), Gaps = 14/259 (5%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
           L+ VD E   +  + +  RE+  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 234 LQEVDGEIEAVLQKKAKARELEFQISGVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 288

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
           +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 289 YHHLGVVPPRGVLLHGPPGCGKTLLANAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 348

Query: 861 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
           F +A +NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 349 FEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 406

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      +   LA L+ 
Sbjct: 407 GATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTP 466

Query: 978 GCTGADISLICREAAISAI 996
           G  GAD+  +CREAA+ A+
Sbjct: 467 GFVGADLMALCREAAMCAV 485



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 564 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 621

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 622 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 681

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 682 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 741

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 742 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 787

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 788 TGADLSALVREASICALRQEMARQKSGN 815


>gi|406698339|gb|EKD01577.1| helicase [Trichosporon asahii var. asahii CBS 8904]
          Length = 730

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 252/667 (37%), Positives = 361/667 (54%), Gaps = 94/667 (14%)

Query: 400  QNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSL-GLRPTKGVLLHGPPGTGKT 458
            +N  A  E  +S+LGGL K+   L +I+    +   + S  G+    GVLLHG PG GKT
Sbjct: 80   ENKYAPPEARLSQLGGLDKQIKQLLEIVALPLLHPEIYSFTGITRPHGVLLHGVPGGGKT 139

Query: 459  SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
             L    A    +   T++ P +VS   GESE+AL E FD A + AP ++F+DE+DAI P 
Sbjct: 140  QLVHCLAGQLQLPFITISAPSIVSGMSGESERALREHFDEAKRHAPCILFLDEVDAITPK 199

Query: 519  RKDGGEELSQRMVATLLNLMDGVC-RTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
            R+    E+ +R+VA LL  MD +  R   V+++ ATNRPDSI+PALRR GR D EIE+  
Sbjct: 200  RETAQREMERRIVAQLLTCMDDLAGRDKPVIMLGATNRPDSIDPALRRAGRFDHEIEM-- 257

Query: 578  SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                         VP+   R +IL  LL  ++ +  + ++ +L+ +T G+VGADL +L  
Sbjct: 258  ------------GVPTVEGREQILRVLLQNLKLAP-EVDIRWLAKSTPGYVGADLTSLTT 304

Query: 638  EAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPC 697
            EA +V ++R                   FE  +  + Q+     N+       LD     
Sbjct: 305  EAGVVAVKRI------------------FETMAGPVSQEV-AMENM------ALDDGP-- 337

Query: 698  TSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKV 757
             + LP+ ++++          IA    N       G   +E+   L L   DF+ A   V
Sbjct: 338  MAQLPSGVMATP---------IAQFLAN-----HPGPLGAEQLGQLVLLPSDFDAALKVV 383

Query: 758  RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
            +PSA RE    VP V W D+G    V+ +L  AV  P +H E F  +G   P+G+L++GP
Sbjct: 384  QPSAKREGFATVPDVTWADIGALGNVRDELHMAVVQPIRHPELFSVVGIDAPSGVLLWGP 443

Query: 818  PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
            PGC KTL+A+AVA+E+  NF++VKGPEL +K+VGESE+AVR +FA+ARA+AP +IFFDE+
Sbjct: 444  PGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFARARASAPCVIFFDEL 503

Query: 878  DGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            D L   R    D +S S  RV++ LL ELDGL  R  V VI ATNRPD IDPA++RPGR 
Sbjct: 504  DALVPRR---DDSMSESSARVVNTLLTELDGLDARKAVYVIGATNRPDMIDPAMVRPGRL 560

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL-----SEGCTGADISLICREA 991
            D+LLYV  P+  +R E+ R H ++ P + + +   +A L      +G +GADI+ + REA
Sbjct: 561  DKLLYVDLPSPAERLEVLRTHTKRTPIAEE-DWAAIAALVNSDACDGFSGADIAALVREA 619

Query: 992  ----------AISAIEENLD----ASRITM--------QHLKTAIRHVQPS----EIHSY 1025
                      AI A E + D       +TM        +H   A +  QPS    + H Y
Sbjct: 620  ASLALRSALEAIGAFENDADRGSRGGEVTMAPQVNVSAEHFAKAAQKTQPSVSREQRHKY 679

Query: 1026 KELSAKF 1032
            + +  K+
Sbjct: 680  ERMRDKY 686



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/257 (41%), Positives = 143/257 (55%), Gaps = 20/257 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  LG +  E  +   ++         S +G+    GVLL G
Sbjct: 385 PSAKREGFATVPDVTWADIGALGNVRDELHMA--VVQPIRHPELFSVVGIDAPSGVLLWG 442

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++S  N  +V GPE++++  GESE+A+ +VF  A  SAP V+F DE
Sbjct: 443 PPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFARARASAPCVIFFDE 502

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           LDA+ P R D   E S R+V TLL  +DG+     V VI ATNRPD I+PA+ RPGRLD+
Sbjct: 503 LDALVPRRDDSMSESSARVVNTLLTELDGLDARKAVYVIGATNRPDMIDPAMVRPGRLDK 562

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD-SEVEYL--SMATHGFV 628
            + +D+              PSPA+RLE+L         +  D + +  L  S A  GF 
Sbjct: 563 LLYVDL--------------PSPAERLEVLRTHTKRTPIAEEDWAAIAALVNSDACDGFS 608

Query: 629 GADLAALCNEAALVCLR 645
           GAD+AAL  EAA + LR
Sbjct: 609 GADIAALVREAASLALR 625


>gi|296229993|ref|XP_002760519.1| PREDICTED: nuclear valosin-containing protein-like isoform 2
            [Callithrix jacchus]
          Length = 765

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 331/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 202  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 261

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 262  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVASTARVLVIGATNR 321

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 322  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 364

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 365  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ------------------- 405

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
              Q  D                 P   DLP+  +         +SE  D     +     
Sbjct: 406  --QKKD-----------------PEMDDLPSKGVQEERLGTEPISETQDELQRLLGLLRD 446

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 447  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 506

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 507  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 566

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 567  ESERAVRQIFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLETR 624

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 625  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 684

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA++ A+ + +            +I+ +H + A + V
Sbjct: 685  LEAIAGDLRCDCYTGADLSALVREASVCALRQEMARQKSGNEKGELKISHKHFEEAFKKV 744

Query: 1018 QPS 1020
            + S
Sbjct: 745  RSS 747



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 136/237 (57%), Gaps = 14/237 (5%)

Query: 767 LEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
             +  VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPPGC K
Sbjct: 166 FRISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGK 220

Query: 823 TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
           TL+A A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID +  
Sbjct: 221 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITP 280

Query: 883 IRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR 
Sbjct: 281 KR--EVASKDMERRIVAQLLTCMDDLNNVASTARVLVIGATNRPDSLDPALRRAGRFDRE 338

Query: 940 LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           + +G P+E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+
Sbjct: 339 ICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 395



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 474 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 531

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ ++F  A  SAP V+F DE
Sbjct: 532 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQIFQRAKNSAPCVIFFDE 591

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 592 VDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 651

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 652 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 697

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 698 TGADLSALVREASVCALRQEMARQKSGN 725


>gi|449495916|ref|XP_002194423.2| PREDICTED: nuclear valosin-containing protein-like [Taeniopygia
            guttata]
          Length = 839

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 241/603 (39%), Positives = 334/603 (55%), Gaps = 84/603 (13%)

Query: 437  SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
            + LG+ P +G LLHGPPG GKT LA+  A +  + +  V   E+VS   GESEQ L E+F
Sbjct: 284  THLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEIVSGVSGESEQKLRELF 343

Query: 497  DSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAAT 553
            D A  SAP V+FIDE+DAI P R+   +++ +R+VA  L  MD    V  T  VLVI AT
Sbjct: 344  DQAVSSAPCVLFIDEIDAITPKREVASKDMERRIVAQFLTCMDDLNNVAATTQVLVIGAT 403

Query: 554  NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
            NRPDS++PALRR GR DREI +               +P    R +IL  L   ++  L 
Sbjct: 404  NRPDSLDPALRRAGRFDREICL--------------GIPDEGAREKILQTLCRKLK--LP 447

Query: 614  DS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDT 672
            +S E  +L+  T G+VGADL ALC EAA+  + R   +  +S   H+ G          T
Sbjct: 448  ESFEFRHLARLTPGYVGADLMALCREAAMGTVNR---VLITSGEHHTPG--------GST 496

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                     ++ +  +  LD            LL    PL                    
Sbjct: 497  AEGSPGVGADVKDELQRLLD------------LLKEQAPL-------------------- 524

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
                 E+   L +E+ DF  A   V+PSA RE  + +P V W D+G   +V+ +L  A+ 
Sbjct: 525  ---PEEQLQKLCIEMNDFIVALSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMAIL 581

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P ++ E FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGE
Sbjct: 582  APVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 641

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F +AR +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R 
Sbjct: 642  SERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGASV--RVVNQLLTEMDGLENRQ 699

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNI 969
             V ++AATNRPD IDPA+LRPGR D+ LYVG P   DR  I +   +   + P  SDV++
Sbjct: 700  QVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDSDVSL 759

Query: 970  RELACLSEGC---TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
             ++A  S+ C   TGAD+S + REA+I A+ + +            +I+ +H + A R V
Sbjct: 760  EDIA-YSQHCDCYTGADLSALVREASICALRQEMALQNTQGKKGEIKISHKHFEEAFRKV 818

Query: 1018 QPS 1020
            + S
Sbjct: 819  KSS 821



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/234 (41%), Positives = 135/234 (57%), Gaps = 6/234 (2%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P VK+EDVGG  E   ++ + +    +H E +  +G  PP G L+ GPPGC KTL+A+A+
Sbjct: 253  PSVKFEDVGGNDETLKEICKML-LHIRHPEVYTHLGVVPPRGFLLHGPPGCGKTLLAQAI 311

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E  L  L V   E+ S   GESE+ +R LF +A ++AP ++F DEID +   R  E  
Sbjct: 312  AGELELPMLKVAATEIVSGVSGESEQKLRELFDQAVSSAPCVLFIDEIDAITPKR--EVA 369

Query: 890  GVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               +  R+++Q L  +D L+       V VI ATNRPD +DPAL R GRFDR + +G P+
Sbjct: 370  SKDMERRIVAQFLTCMDDLNNVAATTQVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 429

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            E  RE+I +   RK+        R LA L+ G  GAD+  +CREAA+  +   L
Sbjct: 430  EGAREKILQTLCRKLKLPESFEFRHLARLTPGYVGADLMALCREAAMGTVNRVL 483



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/266 (37%), Positives = 145/266 (54%), Gaps = 21/266 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  +      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 548 PSAKREGFVTIPDVTWADIGALEDVREELTMA--ILAPVRNPEQFKALGLTTPAGVLLAG 605

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 606 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDE 665

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 666 VDALCPRRSDRESGASVRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDK 725

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATH--GF 627
            + +               +P P  RL IL  +        LDS+V  E ++ + H   +
Sbjct: 726 TLYV--------------GLPPPEDRLAILKTITKDGTRPPLDSDVSLEDIAYSQHCDCY 771

Query: 628 VGADLAALCNEAALVCLRRYSKIQTS 653
            GADL+AL  EA++  LR+   +Q +
Sbjct: 772 TGADLSALVREASICALRQEMALQNT 797


>gi|332251957|ref|XP_003275118.1| PREDICTED: nuclear valosin-containing protein-like isoform 2
            [Nomascus leucogenys]
          Length = 749

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 241/603 (39%), Positives = 330/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 186  LGVVPPRGVLLHGPPGCGKTLLANAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 245

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 246  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 305

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 306  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 348

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 349  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ------------------- 389

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
              Q  D                 P   DLP+  +          SE  D     +     
Sbjct: 390  --QKKD-----------------PEMEDLPSKEVQEERLGTEPTSETQDELQRLLGLLRD 430

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 431  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 490

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 491  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 550

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 551  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 608

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 609  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 668

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V
Sbjct: 669  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKV 728

Query: 1018 QPS 1020
            + S
Sbjct: 729  RSS 731



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/259 (41%), Positives = 148/259 (57%), Gaps = 14/259 (5%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
           L+ VD E   +  + +  RE+  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 128 LQEVDGEIEAVLQKKAKARELEFQISGVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 182

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
           +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 183 YHHLGVVPPRGVLLHGPPGCGKTLLANAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 242

Query: 861 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
           F +A +NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 243 FEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 300

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      +   LA L+ 
Sbjct: 301 GATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTP 360

Query: 978 GCTGADISLICREAAISAI 996
           G  GAD+  +CREAA+ A+
Sbjct: 361 GFVGADLMALCREAAMCAV 379



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 458 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 515

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 516 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 575

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 576 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 635

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 636 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 681

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 682 TGADLSALVREASICALRQEMARQKSGN 709


>gi|390594563|gb|EIN03973.1| AAA-domain-containing protein [Punctularia strigosozonata HHB-11173
            SS5]
          Length = 797

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 254/653 (38%), Positives = 353/653 (54%), Gaps = 88/653 (13%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G+ P +GVLLHGPPG GKT LA   A + GV   +++ P +VS   GESE+ L + FD A
Sbjct: 155  GVHPPRGVLLHGPPGCGKTLLANAIAGELGVPFISISAPSIVSGMSGESEKTLRDTFDEA 214

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
             + AP ++FIDE+DA+ P R+    E+ +R+VA  L  MD +   +TD   V+VI ATNR
Sbjct: 215  KKLAPCLLFIDEIDAVTPKRESAQREMERRIVAQFLTCMDDMSWDKTDNKPVVVIGATNR 274

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++ ALRR GR D EI +               VP    R +IL  L S +    L+ 
Sbjct: 275  PDSLDAALRRAGRFDHEISM--------------GVPDEEARTQILRVLSSKLR---LEG 317

Query: 616  EVEY--LSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  L+ AT G+VGADLAAL   A +V ++R + ++   + VL          G  D 
Sbjct: 318  SFDFSALAKATPGYVGADLAALTGAAGIVAVKRIFQQLSEGTLVLPEAAIAAFTNGAEDE 377

Query: 673  ML---QDSDCSRNITESSRDCLDSASPCTSD-------------------LPTSLLSSSL 710
             +   +D D S + T      L    P T +                   +P + LS  L
Sbjct: 378  SMNVDRDQDISGHATSIP---LVGQEPATEEPPRPAPAPSAARPAPSGKHIPFANLSLPL 434

Query: 711  PLRGTVSEIADNFHNGVSDSSGGMFMSEKGCA-LKLELVDFEKARMKVRPSAMREVILEV 769
            P  G  S I  +F     D      ++E   A L + L DF++A  +V+PS+ RE    V
Sbjct: 435  PSPG--SSIL-SFLQAHPDP-----LTEAQLAPLSITLADFQEALTQVQPSSKREGFATV 486

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V W DVG   + + +L  A+  P +  E FK +G     G+LM+GPPGC KTL+A+AV
Sbjct: 487  PDVTWSDVGALHQTREELHMAIVQPIRRPELFKAVGIEAACGVLMWGPPGCGKTLLAKAV 546

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E+  NF++VKGPEL +K+VGESE+AVR +F++ARA++P IIFFDE+D L   R    D
Sbjct: 547  ANESRANFISVKGPELLNKYVGESERAVRQVFSRARASSPCIIFFDELDALVPRR---DD 603

Query: 890  GVSVSD-RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             +S S  RV++ LL ELDGL  R +V VIAATNRPD IDPA+ RPGR D+LLYV  P+E 
Sbjct: 604  SLSESSARVVNTLLTELDGLDARKSVYVIAATNRPDMIDPAMCRPGRLDKLLYVDLPSEE 663

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGC---TGADISLICREAAISAIEENLDASR- 1004
            +R EIF    RK+P    V    L  + E C   +GAD++ + REA + A+   L     
Sbjct: 664  ERAEIFSAVARKLPLGDGVRDECLMMVKEECDGYSGADLTALVREAGVVALRRTLGTFDQ 723

Query: 1005 ------------------ITMQHLKTAIRHVQPS----EIHSYKELSAKFQRL 1035
                              +T +  +TA+  VQPS    +   Y+ L +KF  L
Sbjct: 724  METSGASVSSPPGEIHVLVTAEDFRTALDKVQPSVSAAQRRRYQALRSKFAGL 776



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 127/232 (54%), Gaps = 6/232 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG  +   +++E V  P  H E +   G  PP G+L+ GPPGC KTL+A A+
Sbjct: 120 PTTRLSDLGGVGDAVEKMLELVAMPLCHPEIYLHTGVHPPRGVLLHGPPGCGKTLLANAI 179

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ F+++  P + S   GESEK +R  F +A+  AP ++F DEID +   R  ES 
Sbjct: 180 AGELGVPFISISAPSIVSGMSGESEKTLRDTFDEAKKLAPCLLFIDEIDAVTPKR--ESA 237

Query: 890 GVSVSDRVMSQLLVELDGLH----QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++Q L  +D +         V VI ATNRPD +D AL R GRFD  + +G P
Sbjct: 238 QREMERRIVAQFLTCMDDMSWDKTDNKPVVVIGATNRPDSLDAALRRAGRFDHEISMGVP 297

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           +E  R +I R+   K+      +   LA  + G  GAD++ +   A I A++
Sbjct: 298 DEEARTQILRVLSSKLRLEGSFDFSALAKATPGYVGADLAALTGAAGIVAVK 349



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/250 (38%), Positives = 140/250 (56%), Gaps = 21/250 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +G L +    L   I+    +  L  ++G+    GVL+ GPPG GKT LA+  A++S 
Sbjct: 492 SDVGALHQTREELHMAIVQPIRRPELFKAVGIEAACGVLMWGPPGCGKTLLAKAVANESR 551

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            N  +V GPE++++  GESE+A+ +VF  A  S+P ++F DELDA+ P R D   E S R
Sbjct: 552 ANFISVKGPELLNKYVGESERAVRQVFSRARASSPCIIFFDELDALVPRRDDSLSESSAR 611

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V TLL  +DG+     V VIAATNRPD I+PA+ RPGRLD+ + +D+            
Sbjct: 612 VVNTLLTELDGLDARKSVYVIAATNRPDMIDPAMCRPGRLDKLLYVDL------------ 659

Query: 590 AVPSPAQRLEILHALLSGME--HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR- 646
             PS  +R EI  A+   +     + D  +  +     G+ GADL AL  EA +V LRR 
Sbjct: 660 --PSEEERAEIFSAVARKLPLGDGVRDECLMMVKEECDGYSGADLTALVREAGVVALRRT 717

Query: 647 ---YSKIQTS 653
              + +++TS
Sbjct: 718 LGTFDQMETS 727


>gi|393221022|gb|EJD06507.1| ribosome biogenesis ATPase RIX7 [Fomitiporia mediterranea MF3/22]
          Length = 773

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 256/713 (35%), Positives = 386/713 (54%), Gaps = 86/713 (12%)

Query: 378  PPLNAVSKSLREGTLPNAQIEFQNVQATVEQD--------ISKLGGLSK-EYAILKDIII 428
            PP + V + LR     NA+   +  ++++           +S LGG+      +L+ + +
Sbjct: 83   PPTSGVKRKLRPSRTANAEEASKRYKSSLSSKDYSPPSTRLSDLGGVEACVEKMLELVAM 142

Query: 429  SSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGES 488
                       G++P +GVLLHGPPG GKT LA   A + GV   +V+ P +VS   GES
Sbjct: 143  PLCHPEVYLHTGVQPPRGVLLHGPPGCGKTLLANAIAGELGVPFISVSAPSIVSGMSGES 202

Query: 489  EQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG 546
            E+ L + F+ A ++AP ++FIDE+DAI P R+    E+ +R+VA  L  MD +   +TD 
Sbjct: 203  EKTLRDTFEEAKKNAPCLLFIDEIDAITPKRESAQREMERRIVAQFLTCMDDMSWDKTDN 262

Query: 547  --VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL 604
              V+VI ATNRPDS++ ALRR GR D EI +               VP    R +IL   
Sbjct: 263  KPVIVIGATNRPDSLDAALRRAGRFDHEISM--------------GVPDEEARAQILRVF 308

Query: 605  LSGM--EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTG 661
             S +  E      + + L+ AT G+VGADLAAL   A ++ ++R + ++   + VL    
Sbjct: 309  CSRLRIEGGF---DFQALAKATPGYVGADLAALTGAAGVIAVKRIFQQLSDGTIVLPEPD 365

Query: 662  TLFEFEGHSDTMLQDS-DCSRNITESSRDCLDSASPCT-SDLPTSLLSSSLPLRGTVSEI 719
             L   +G  D M  DS D S  ++++     +     T ++LP SL S+S+         
Sbjct: 366  VL---KGAEDGMAIDSGDASGMVSQTVDRATEPLKLSTFTNLPQSLQSNSI--------- 413

Query: 720  ADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG 779
                H  V+  +       +   L +  VDF +A  +V+PS+ RE    VP V W D+G 
Sbjct: 414  ---VHFLVAHPNP--LTEAQLTPLFISYVDFTQALKQVQPSSKREGFTTVPDVTWADIGA 468

Query: 780  QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLA 839
               ++ +L  A+  P +  E FKR+G   P G+L++GPPGC KTL+A+AVA+E+G NF++
Sbjct: 469  LHTIREELHMAIVQPIRRPELFKRVGISAPCGVLLWGPPGCGKTLLAKAVANESGANFIS 528

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVM 898
            VKGPEL +K+VGESE+AVR +FA+ARA++P +IFFDE+D L   R    D +S S  R++
Sbjct: 529  VKGPELLNKYVGESERAVRQVFARARASSPCVIFFDELDALVPRR---DDSLSESSARMV 585

Query: 899  SQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            + LL ELDGL +R  V VI ATNRPD +DPA+ RPGR D+LLYV  P   +R EI R   
Sbjct: 586  NTLLTELDGLDERRGVHVIGATNRPDMLDPAMCRPGRLDKLLYVDLPTADERVEITRTVS 645

Query: 959  RKIPCS-SDVNIRELACL----SEGCTGADISLICREAAISAIE--------ENLDAS-- 1003
            R +P +  D     L  L     EG +GAD+S + REA ++A+         +++DA+  
Sbjct: 646  RTVPLAGGDEAKVALGALVRERCEGFSGADLSALVREAGVNALRRAVFKPTGDDMDATTE 705

Query: 1004 -----------RITMQHLKTAIRHVQPSEI----HSYKELSAKFQRLVHSNAE 1041
                       R+ +  L  ++  VQ  +     + +  +S +F + V ++A+
Sbjct: 706  SEDVNVSLDDFRLALTKLGPSVSQVQRKKYAAMRNKFAGMSLRFTKGVEADAD 758


>gi|45643123|ref|NP_002524.2| nuclear valosin-containing protein-like isoform 1 [Homo sapiens]
 gi|32699415|sp|O15381.1|NVL_HUMAN RecName: Full=Nuclear valosin-containing protein-like; Short=NVLp;
            Short=Nuclear VCP-like protein
 gi|2406565|gb|AAB70457.1| nuclear VCP-like protein NVLp.2 [Homo sapiens]
 gi|119590120|gb|EAW69714.1| nuclear VCP-like, isoform CRA_a [Homo sapiens]
          Length = 856

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 237/602 (39%), Positives = 329/602 (54%), Gaps = 76/602 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 455

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
              ++  +A  T GFVGADL ALC EAA+  + R                L + +      
Sbjct: 456  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNR---------------VLMKLQEQQ--- 497

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
                                 +P   DLP+  +          SE  D     +      
Sbjct: 498  -------------------KKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQ 538

Query: 734  MFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
              +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+ 
Sbjct: 539  DPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAIL 598

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGE
Sbjct: 599  APVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 658

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R 
Sbjct: 659  SERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEARQ 716

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNI 969
             V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+
Sbjct: 717  QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNL 776

Query: 970  RELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
              +A  L   C TGAD+S + REA+I A+ + +            +++ +H + A + V+
Sbjct: 777  EAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVR 836

Query: 1019 PS 1020
             S
Sbjct: 837  SS 838



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/293 (38%), Positives = 161/293 (54%), Gaps = 19/293 (6%)

Query: 716 VSEIADNFHNGV--SDSSGGMFMSEKGCALK---LELVDFEKARMKVRPSAMREVILEVP 770
           ++EI D+  + +  SD      +  KG   K   L+ VD E   +  + +  R +  ++ 
Sbjct: 201 ITEIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQIS 260

Query: 771 KVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPPGC KTL+A
Sbjct: 261 NVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLA 315

Query: 827 RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID +   R  
Sbjct: 316 HAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR-- 373

Query: 887 ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR + +G
Sbjct: 374 EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 433

Query: 944 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            P+E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+
Sbjct: 434 IPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 486



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 743 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 789 TGADLSALVREASICALRQEMARQKSGN 816


>gi|45643125|ref|NP_996671.1| nuclear valosin-containing protein-like isoform 2 [Homo sapiens]
 gi|2406580|gb|AAB70460.1| nuclear VCP-like protein NVLp.1 [Homo sapiens]
 gi|119590122|gb|EAW69716.1| nuclear VCP-like, isoform CRA_c [Homo sapiens]
          Length = 750

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/603 (39%), Positives = 329/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 187  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 246

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 247  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 306

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 307  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 349

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 350  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ------------------ 391

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                                  +P   DLP+  +          SE  D     +     
Sbjct: 392  --------------------KKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRD 431

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 432  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 491

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 492  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 551

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 552  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 609

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 610  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 669

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +++ +H + A + V
Sbjct: 670  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKV 729

Query: 1018 QPS 1020
            + S
Sbjct: 730  RSS 732



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/293 (38%), Positives = 161/293 (54%), Gaps = 19/293 (6%)

Query: 716 VSEIADNFHNGV--SDSSGGMFMSEKGCALK---LELVDFEKARMKVRPSAMREVILEVP 770
           ++EI D+  + +  SD      +  KG   K   L+ VD E   +  + +  R +  ++ 
Sbjct: 95  ITEIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQIS 154

Query: 771 KVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPPGC KTL+A
Sbjct: 155 NVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLA 209

Query: 827 RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID +   R  
Sbjct: 210 HAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR-- 267

Query: 887 ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR + +G
Sbjct: 268 EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 327

Query: 944 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            P+E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+
Sbjct: 328 IPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 380



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 459 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 516

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 517 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 576

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 577 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 636

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 637 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 682

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 683 TGADLSALVREASICALRQEMARQKSGN 710


>gi|302803690|ref|XP_002983598.1| hypothetical protein SELMODRAFT_624 [Selaginella moellendorffii]
 gi|300148841|gb|EFJ15499.1| hypothetical protein SELMODRAFT_624 [Selaginella moellendorffii]
          Length = 516

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/286 (63%), Positives = 227/286 (79%), Gaps = 3/286 (1%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            +E   +L +   DFE A  K+RPSAMREVILEVPKV+W D+GGQ  VK QL E VEWP K
Sbjct: 231  TESASSLSVGREDFELASEKIRPSAMREVILEVPKVRWSDIGGQSAVKQQLKEIVEWPHK 290

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            HQ++F RIGT PP G+L++GPPGCSKT+MARAVA+E GLNF+AVKGPELFSKWVGESEKA
Sbjct: 291  HQDSFARIGTTPPRGVLLYGPPGCSKTMMARAVAAETGLNFIAVKGPELFSKWVGESEKA 350

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIR---GKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            VR+LFA+A+A APS++FFDEIDGLA  R   G  +DG+SV DRVMSQLL+E+DG+  R  
Sbjct: 351  VRALFARAKAAAPSVVFFDEIDGLAITRSSGGGRTDGISVEDRVMSQLLIEMDGVSLRNG 410

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELA 973
            V+VIAATNRPDK+DPALLRPGRFDRL+YVGPP+   R++IF IH++  PC +DV++  LA
Sbjct: 411  VSVIAATNRPDKLDPALLRPGRFDRLIYVGPPDRAARQQIFEIHMKNTPCKADVSVDVLA 470

Query: 974  CLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
              +E  TGADI+ +CREAA++A+EE+LD+  +   H   A+  V P
Sbjct: 471  SYTESYTGADIAAVCREAALAALEEDLDSVAVGASHFDVALTRVLP 516



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 138/245 (56%), Positives = 176/245 (71%), Gaps = 15/245 (6%)

Query: 411 SKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S LGGLS+E   LK+I+  S +K  TL+   L+ TKGVLL+GPPGTGKTSLA+  A ++G
Sbjct: 3   SALGGLSEEIETLKEIVQYSLLKPETLARYCLKRTKGVLLYGPPGTGKTSLAQAVAKEAG 62

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           V +  +NGPE+V++ +GESE A+  +FD A++ AP+VVFIDELDAI P R++G E L QR
Sbjct: 63  VKMLVINGPEIVTEYHGESEAAMKAIFDLAAREAPSVVFIDELDAITPQRREGSEGLGQR 122

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ATLL  MDGV   +GVLVIAATNRP+SI+PALRR GR D EIEI             A
Sbjct: 123 LMATLLTSMDGV-HQNGVLVIAATNRPESIDPALRRHGRFDYEIEI-------------A 168

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
            VP+P  RLEIL   LS ++H+L   +V+ L+ ATHGFVGADL+ALCNEAAL  LRR+  
Sbjct: 169 GVPTPKGRLEILQVHLSRLKHTLSSEDVQALASATHGFVGADLSALCNEAALGALRRHVH 228

Query: 650 IQTSS 654
            +T S
Sbjct: 229 SKTES 233



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 140/229 (61%), Gaps = 5/229 (2%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  +GG  E    L E V++     E   R   +   G+L++GPPG  KT +A+AVA EA
Sbjct: 2    YSALGGLSEEIETLKEIVQYSLLKPETLARYCLKRTKGVLLYGPPGTGKTSLAQAVAKEA 61

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            G+  L + GPE+ +++ GESE A++++F  A   APS++F DE+D +   R + S+G  +
Sbjct: 62   GVKMLVINGPEIVTEYHGESEAAMKAIFDLAAREAPSVVFIDELDAITPQRREGSEG--L 119

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV-GPPNETDREE 952
              R+M+ LL  +DG+HQ   V VIAATNRP+ IDPAL R GRFD  + + G P    R E
Sbjct: 120  GQRLMATLLTSMDGVHQN-GVLVIAATNRPESIDPALRRHGRFDYEIEIAGVPTPKGRLE 178

Query: 953  IFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            I ++HL ++  + S  +++ LA  + G  GAD+S +C EAA+ A+  ++
Sbjct: 179  ILQVHLSRLKHTLSSEDVQALASATHGFVGADLSALCNEAALGALRRHV 227



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 132/240 (55%), Gaps = 21/240 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG S     LK+I+      + + + +G  P +GVLL+GPPG  KT +AR  A ++G
Sbjct: 269 SDIGGQSAVKQQLKEIVEWPHKHQDSFARIGTTPPRGVLLYGPPGCSKTMMARAVAAETG 328

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE---- 525
           +N   V GPE+ S+  GESE+A+  +F  A  +AP+VVF DE+D +A  R  GG      
Sbjct: 329 LNFIAVKGPELFSKWVGESEKAVRALFARAKAAAPSVVFFDEIDGLAITRSSGGGRTDGI 388

Query: 526 -LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            +  R+++ LL  MDGV   +GV VIAATNRPD ++PAL RPGR DR I +         
Sbjct: 389 SVEDRVMSQLLIEMDGVSLRNGVSVIAATNRPDKLDPALLRPGRFDRLIYV--------- 439

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  P  A R +I    +        D  V+ L+  T  + GAD+AA+C EAAL  L
Sbjct: 440 -----GPPDRAARQQIFEIHMKNTPCK-ADVSVDVLASYTESYTGADIAAVCREAALAAL 493


>gi|327262665|ref|XP_003216144.1| PREDICTED: nuclear valosin-containing protein-like [Anolis
            carolinensis]
          Length = 844

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 249/656 (37%), Positives = 354/656 (53%), Gaps = 82/656 (12%)

Query: 383  VSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLR 442
            +  +LR+  + +  +E +      E     +GG  +    +  +++        + LG  
Sbjct: 235  IQSALRKQKVKSKGLELRTSSVKFED----IGGNDETLKEVCKMLVHIRHPEVYNHLGAV 290

Query: 443  PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
            P +G LLHGPPG GKT LA+  A +  + +  V   E+VS   GESEQ L E+FD A  S
Sbjct: 291  PPRGFLLHGPPGCGKTLLAQAIAGELELPILKVAATEIVSGVSGESEQKLRELFDQAVTS 350

Query: 503  APAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG---VLVIAATNRPDSI 559
            AP ++F+DE+DAI P R+   +++ +R+VA LL  MD +    G   VLVI ATNRPDS+
Sbjct: 351  APCLLFLDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNLAGTAQVLVIGATNRPDSL 410

Query: 560  EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVE 618
            EPALRR GR DREI +               +P  A R +IL  L   +   L +S +  
Sbjct: 411  EPALRRAGRFDREICL--------------GIPDEAAREKILKTLCRKLR--LRESFDFG 454

Query: 619  YLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSD 678
            +L+  T G+VGADL ALC EAA+  +   +++    DV      + + E  S       D
Sbjct: 455  HLAHLTPGYVGADLMALCREAAMCAV---NRVLVKPDV-EKQEVMRKGERTSG-----ED 505

Query: 679  CSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSE 738
              RNI E      D            LL    PL                         +
Sbjct: 506  MKRNIEE-----FDELQRLLQ-----LLKEPDPL-----------------------GED 532

Query: 739  KGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQ 798
            K   L +EL DF  A   ++PSA RE  + VP V W D+G   +++ +L  A+  P ++ 
Sbjct: 533  KLQKLSIELNDFIVALSSMQPSAKREGFVTVPDVTWADIGALEDIREELTMAILAPVRNP 592

Query: 799  EAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVR 858
            E F+ +G   P GIL+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE+AVR
Sbjct: 593  EQFQALGLTAPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVR 652

Query: 859  SLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIA 918
             +F +AR +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V ++A
Sbjct: 653  QVFQRARNSAPCVIFFDEVDALCPRRSDHESGASV--RVVNQLLTEMDGLEFRRQVFIMA 710

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELAC- 974
            ATNRPD IDPA+LRPGR D+ LYVG P   DR  I +   +   + P   DV++ E+AC 
Sbjct: 711  ATNRPDIIDPAILRPGRLDKTLYVGLPPPMDRVAILKTITKDGTRPPLDIDVDLEEIACN 770

Query: 975  -LSEGCTGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQPS 1020
               +  TGAD+S + REA++ A++E + A          +IT +H + A + V+ S
Sbjct: 771  PCCDCYTGADLSALVREASLCALKEEMAAFSTTNRKGEIKITKKHFEEAFKKVKSS 826



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/283 (36%), Positives = 150/283 (53%), Gaps = 6/283 (2%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            L    VK+ED+GG  E   ++ + +    +H E +  +G  PP G L+ GPPGC KTL+A
Sbjct: 251  LRTSSVKFEDIGGNDETLKEVCKML-VHIRHPEVYNHLGAVPPRGFLLHGPPGCGKTLLA 309

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +A+A E  L  L V   E+ S   GESE+ +R LF +A  +AP ++F DEID +   R  
Sbjct: 310  QAIAGELELPILKVAATEIVSGVSGESEQKLRELFDQAVTSAPCLLFLDEIDAITPKR-- 367

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            E     +  R+++QLL  +D L+       V VI ATNRPD ++PAL R GRFDR + +G
Sbjct: 368  EVASKDMERRIVAQLLTCMDDLNNLAGTAQVLVIGATNRPDSLEPALRRAGRFDREICLG 427

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
             P+E  RE+I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+   L   
Sbjct: 428  IPDEAAREKILKTLCRKLRLRESFDFGHLAHLTPGYVGADLMALCREAAMCAVNRVLVKP 487

Query: 1004 RITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESG 1046
             +  Q +          ++    E   + QRL+    E D  G
Sbjct: 488  DVEKQEVMRKGERTSGEDMKRNIEEFDELQRLLQLLKEPDPLG 530


>gi|332251959|ref|XP_003275119.1| PREDICTED: nuclear valosin-containing protein-like isoform 3
            [Nomascus leucogenys]
          Length = 764

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 241/603 (39%), Positives = 330/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 201  LGVVPPRGVLLHGPPGCGKTLLANAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 260

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 261  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 320

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 321  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 363

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 364  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ------------------- 404

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
              Q  D                 P   DLP+  +          SE  D     +     
Sbjct: 405  --QKKD-----------------PEMEDLPSKEVQEERLGTEPTSETQDELQRLLGLLRD 445

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 446  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 505

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 506  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 565

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 566  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 623

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 624  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 683

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +I+ +H + A + V
Sbjct: 684  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKISHKHFEEAFKKV 743

Query: 1018 QPS 1020
            + S
Sbjct: 744  RSS 746



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/259 (41%), Positives = 148/259 (57%), Gaps = 14/259 (5%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
           L+ VD E   +  + +  RE+  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 143 LQEVDGEIEAVLQKKAKARELEFQISGVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 197

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
           +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 198 YHHLGVVPPRGVLLHGPPGCGKTLLANAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 257

Query: 861 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
           F +A +NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 258 FEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 315

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      +   LA L+ 
Sbjct: 316 GATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTP 375

Query: 978 GCTGADISLICREAAISAI 996
           G  GAD+  +CREAA+ A+
Sbjct: 376 GFVGADLMALCREAAMCAV 394



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 473 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 530

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 531 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 590

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 591 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 650

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 651 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 696

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 697 TGADLSALVREASICALRQEMARQKSGN 724


>gi|410294694|gb|JAA25947.1| nuclear VCP-like [Pan troglodytes]
 gi|410338085|gb|JAA37989.1| nuclear VCP-like [Pan troglodytes]
          Length = 856

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 237/602 (39%), Positives = 329/602 (54%), Gaps = 76/602 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVLNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 455

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
              ++  +A  T GFVGADL ALC EAA+  + R                L + +      
Sbjct: 456  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNR---------------VLMKLQEQQ--- 497

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
                                 +P   DLP+  +          SE  D     +      
Sbjct: 498  -------------------KKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQ 538

Query: 734  MFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
              +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+ 
Sbjct: 539  DPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAIL 598

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGE
Sbjct: 599  APVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 658

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R 
Sbjct: 659  SERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEARQ 716

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNI 969
             V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+
Sbjct: 717  QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNL 776

Query: 970  RELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
              +A  L   C TGAD+S + REA+I A+ + +            +++ +H + A + V+
Sbjct: 777  EAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVR 836

Query: 1019 PS 1020
             S
Sbjct: 837  SS 838



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/293 (38%), Positives = 160/293 (54%), Gaps = 19/293 (6%)

Query: 716 VSEIADNFHNGV--SDSSGGMFMSEKGCALK---LELVDFEKARMKVRPSAMREVILEVP 770
           ++EI D+  + +  SD      +  KG   K   L+ VD E   +  + +  R +  ++ 
Sbjct: 201 ITEIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQIS 260

Query: 771 KVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPPGC KTL+A
Sbjct: 261 NVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLA 315

Query: 827 RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            A+A E  L  L V  PE+ S   GESE+ +R LF +A  NAP IIF DEID +   R  
Sbjct: 316 HAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVLNAPCIIFIDEIDAITPKR-- 373

Query: 887 ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR + +G
Sbjct: 374 EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 433

Query: 944 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            P+E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+
Sbjct: 434 IPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 486



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 743 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 789 TGADLSALVREASICALRQEMARQKSGN 816


>gi|194386052|dbj|BAG59590.1| unnamed protein product [Homo sapiens]
          Length = 856

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 242/608 (39%), Positives = 329/608 (54%), Gaps = 88/608 (14%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 455

Query: 616  EVEYLSMA--THGFVGADLAALCNEAA-------LVCLRRYSKIQTSSDVLHSTGTLFEF 666
              ++  +A  T GFVGADL ALC EAA       L+ LR   K     + L S G   E 
Sbjct: 456  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLREQQKKNPEMEDLPSKGVQEER 515

Query: 667  EGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNG 726
             G   T     +  R +                     LL    PL              
Sbjct: 516  LGTEPTSETQDELQRLL--------------------GLLRDQDPLS------------- 542

Query: 727  VSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQ 786
                       E+   L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +
Sbjct: 543  ----------EEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREE 592

Query: 787  LMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELF 846
            L  A+  P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL 
Sbjct: 593  LTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELL 652

Query: 847  SKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELD 906
            + +VGESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+D
Sbjct: 653  NMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMD 710

Query: 907  GLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPC 963
            GL  R  V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P 
Sbjct: 711  GLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPL 770

Query: 964  SSDVNIRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKT 1012
             +DVN+  +A  L   C TGAD+S + REA+I A+ + +            +++ +H + 
Sbjct: 771  DADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEE 830

Query: 1013 AIRHVQPS 1020
            A + V+ S
Sbjct: 831  AFKKVRSS 838



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/293 (38%), Positives = 161/293 (54%), Gaps = 19/293 (6%)

Query: 716 VSEIADNFHNGV--SDSSGGMFMSEKGCALK---LELVDFEKARMKVRPSAMREVILEVP 770
           ++EI D+  + +  SD      +  KG   K   L+ VD E   +  + +  R +  ++ 
Sbjct: 201 ITEIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQIS 260

Query: 771 KVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPPGC KTL+A
Sbjct: 261 NVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLA 315

Query: 827 RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            A+A E  L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID +   R  
Sbjct: 316 HAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR-- 373

Query: 887 ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR + +G
Sbjct: 374 EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 433

Query: 944 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            P+E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+
Sbjct: 434 IPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 486



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 743 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 789 TGADLSALVREASICALRQEMARQKSGN 816


>gi|410222810|gb|JAA08624.1| nuclear VCP-like [Pan troglodytes]
 gi|410266630|gb|JAA21281.1| nuclear VCP-like [Pan troglodytes]
          Length = 856

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/603 (39%), Positives = 329/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVLNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 455

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRY-SKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 456  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ------------------ 497

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                                  +P   DLP+  +          SE  D     +     
Sbjct: 498  --------------------KKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRD 537

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 538  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 597

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 598  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 657

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 658  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 715

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 716  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 775

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +++ +H + A + V
Sbjct: 776  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKV 835

Query: 1018 QPS 1020
            + S
Sbjct: 836  RSS 838



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/293 (38%), Positives = 160/293 (54%), Gaps = 19/293 (6%)

Query: 716 VSEIADNFHNGV--SDSSGGMFMSEKGCALK---LELVDFEKARMKVRPSAMREVILEVP 770
           ++EI D+  + +  SD      +  KG   K   L+ VD E   +  + +  R +  ++ 
Sbjct: 201 ITEIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQIS 260

Query: 771 KVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPPGC KTL+A
Sbjct: 261 NVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLA 315

Query: 827 RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            A+A E  L  L V  PE+ S   GESE+ +R LF +A  NAP IIF DEID +   R  
Sbjct: 316 HAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVLNAPCIIFIDEIDAITPKR-- 373

Query: 887 ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR + +G
Sbjct: 374 EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 433

Query: 944 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            P+E  RE I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+
Sbjct: 434 IPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 486



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 743 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 789 TGADLSALVREASICALRQEMARQKSGN 816


>gi|449283758|gb|EMC90352.1| Nuclear valosin-containing protein-like protein, partial [Columba
            livia]
          Length = 809

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/600 (39%), Positives = 335/600 (55%), Gaps = 62/600 (10%)

Query: 413  LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
            +GG  +    +  ++I        + LG+ P +G LLHGPPG GKT LA+  A +  + +
Sbjct: 243  VGGNDETLQEICKMLIHVRHPEVYNHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPM 302

Query: 473  FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVA 532
              V   E+VS   GESEQ L E+F+ A  SAP V+FIDE+DAI P R+   +++ +R+VA
Sbjct: 303  LKVAATEIVSGVSGESEQKLRELFEQAVSSAPCVLFIDEIDAITPKREVASKDMERRIVA 362

Query: 533  TLLNLMD---GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
              L  MD    V  T  VLVI ATNRPDS++PALRR GR DREI +              
Sbjct: 363  QFLTCMDDLNNVGATTQVLVIGATNRPDSLDPALRRAGRFDREICL-------------- 408

Query: 590  AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRY- 647
             +P  A R +IL  L   ++  L +S +  +L+  T G+VGADL ALC EAA+  + R  
Sbjct: 409  GIPDEAAREKILRTLCRKLK--LPESFDFHHLARLTPGYVGADLMALCREAAMCTVNRVL 466

Query: 648  -SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLL 706
                +     +H+ G   E    + T +   D ++ +    +D L             LL
Sbjct: 467  IKAEKEKGKQIHAGGNAAEEGVGTGTDILVEDDNKQLELPPKDELQRL--------LDLL 518

Query: 707  SSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVI 766
                PL                         E+   L +E+ DF  A   V+PSA RE  
Sbjct: 519  KKQEPL-----------------------PEEQLQKLCIEMNDFIVALTSVQPSAKREGF 555

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            + +P V W D+G   +V+ +L  A+  P ++ E FK +G   P G+L+ GPPGC KTL+A
Sbjct: 556  VTIPDVTWADIGALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLA 615

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+E+GLNF++VKGPEL + +VGESE+AVR +F +AR +AP +IFFDE+D L   R  
Sbjct: 616  KAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSD 675

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               G SV  RV++QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ LYVG P 
Sbjct: 676  RESGASV--RVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPP 733

Query: 947  ETDREEIFRIHLR---KIPCSSDVNIRELACLSEGC---TGADISLICREAAISAIEENL 1000
              DR  I +   +   + P   DV++ E+A  S+ C   TGAD+S + REA+I A+ +++
Sbjct: 734  PEDRLAILKTITKDGTRPPLDIDVSLEEIA-FSQHCDCYTGADLSALVREASICALRQDM 792



 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 133/230 (57%), Gaps = 6/230 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P V +EDVGG  E   ++ + +    +H E +  +G  PP G L+ GPPGC KTL+A+A+
Sbjct: 236 PSVTFEDVGGNDETLQEICKML-IHVRHPEVYNHLGVVPPRGFLLHGPPGCGKTLLAQAI 294

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  L  L V   E+ S   GESE+ +R LF +A ++AP ++F DEID +   R  E  
Sbjct: 295 AGELELPMLKVAATEIVSGVSGESEQKLRELFEQAVSSAPCVLFIDEIDAITPKR--EVA 352

Query: 890 GVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
              +  R+++Q L  +D L+       V VI ATNRPD +DPAL R GRFDR + +G P+
Sbjct: 353 SKDMERRIVAQFLTCMDDLNNVGATTQVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 412

Query: 947 ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           E  RE+I R   RK+      +   LA L+ G  GAD+  +CREAA+  +
Sbjct: 413 EAAREKILRTLCRKLKLPESFDFHHLARLTPGYVGADLMALCREAAMCTV 462



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 144/266 (54%), Gaps = 21/266 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  +      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 548 PSAKREGFVTIPDVTWADIGALEDVREELTMA--ILAPVRNPEQFKALGLTTPAGVLLAG 605

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 606 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDE 665

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 666 VDALCPRRSDRESGASVRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDK 725

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATH--GF 627
            + +               +P P  RL IL  +        LD +V  E ++ + H   +
Sbjct: 726 TLYV--------------GLPPPEDRLAILKTITKDGTRPPLDIDVSLEEIAFSQHCDCY 771

Query: 628 VGADLAALCNEAALVCLRRYSKIQTS 653
            GADL+AL  EA++  LR+   +Q +
Sbjct: 772 TGADLSALVREASICALRQDMALQNT 797


>gi|323509185|dbj|BAJ77485.1| cgd5_2010 [Cryptosporidium parvum]
 gi|323509813|dbj|BAJ77799.1| cgd5_2010 [Cryptosporidium parvum]
          Length = 690

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/622 (36%), Positives = 346/622 (55%), Gaps = 78/622 (12%)

Query: 401 NVQATVEQDISKLGGLSKEYAI-------LKDIIISSSVKSTLSSLGLRPTK-------- 445
           N +  VE D   LG LS+ ++        LKDI    ++   +    +RP K        
Sbjct: 57  NEEFGVESD--GLGNLSQNFSFENPPKLSLKDIAGIENIIRDIEEFVIRPLKLPDIYRAV 114

Query: 446 ------GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
                 GVLL GPPGTGK+ L+   A + G+  F ++GP +++   G SE +L ++FD A
Sbjct: 115 GVNSPCGVLLQGPPGTGKSYLSMCIAGELGLPFFKLSGPNIINGVSGTSEASLRKLFDDA 174

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
            + AP ++ IDE+D + P R+    E+ +R+V+   N +D +     V+V+  T+RPDSI
Sbjct: 175 IEMAPCLIIIDEIDIVTPKREGSNREMERRLVSQFANCLDKIS-GKFVVVVGTTSRPDSI 233

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY 619
           +P +RR GR+DREI + M              P    R +IL  L   +    L ++V++
Sbjct: 234 DPIIRRNGRMDREISMPM--------------PDENARKDILQVLCKEVN---LRNDVDF 276

Query: 620 --LSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDTMLQD 676
             +S  T GFVGADL  L NEAAL+ + + Y + +  ++ + S  TL       D  + D
Sbjct: 277 REISRKTPGFVGADLKTLINEAALIRVNKLYKRFKLDNNAMDSQSTL-----SFDLQIPD 331

Query: 677 SDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFM 736
           +     I E+  +  D     T+     LL   +P          N+ N           
Sbjct: 332 NQAIPEIVETPSEMTDGGQTNTT-----LLEKPIP----------NYSN----------F 366

Query: 737 SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
               C +  E  D  +A   V PS+ RE    +P + WE+VG   E++  L   +  P K
Sbjct: 367 DLSSCLVSHE--DILEALENVTPSSRREGFTTIPDISWENVGALNELRVDLELRIISPIK 424

Query: 797 HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
           +   + R G   P+G+L++GPPGC KTL+A+A+A E+G NF++++GPEL +K+VGESEKA
Sbjct: 425 NSHIYDRFGLETPSGVLLYGPPGCGKTLLAKAIAKESGANFISIRGPELLNKYVGESEKA 484

Query: 857 VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
           VR++F +ARA+AP I+FFDE+D L A R  E +G   ++RV++QLL ELDG+ +R  V V
Sbjct: 485 VRTVFERARASAPCIVFFDELDSLCAARSSEGNG--ATERVVNQLLTELDGVGERRKVFV 542

Query: 917 IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
           +AATNRPD IDPA++RPGR DR++YV  PNE  R +I     +K P + DV++R ++  +
Sbjct: 543 VAATNRPDIIDPAMMRPGRLDRIIYVPLPNEMGRLDILMKVSKKTPLAKDVDLRVISKNT 602

Query: 977 EGCTGADISLICREAAISAIEE 998
           +G +GAD+S + REA + A+++
Sbjct: 603 QGFSGADLSQLIREATLKALDK 624


>gi|66357928|ref|XP_626142.1| nuclear VCP like protein with 2 AAA ATpase domains [Cryptosporidium
           parvum Iowa II]
 gi|46227286|gb|EAK88236.1| nuclear VCP like protein with 2 AAA ATpase domains [Cryptosporidium
           parvum Iowa II]
          Length = 695

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/622 (36%), Positives = 346/622 (55%), Gaps = 78/622 (12%)

Query: 401 NVQATVEQDISKLGGLSKEYAI-------LKDIIISSSVKSTLSSLGLRPTK-------- 445
           N +  VE D   LG LS+ ++        LKDI    ++   +    +RP K        
Sbjct: 62  NEEFGVESD--GLGNLSQNFSFENPPKLSLKDIAGIENIIRDIEEFVIRPLKLPDIYRAV 119

Query: 446 ------GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
                 GVLL GPPGTGK+ L+   A + G+  F ++GP +++   G SE +L ++FD A
Sbjct: 120 GVNSPCGVLLQGPPGTGKSYLSMCIAGELGLPFFKLSGPNIINGVSGTSEASLRKLFDDA 179

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
            + AP ++ IDE+D + P R+    E+ +R+V+   N +D +     V+V+  T+RPDSI
Sbjct: 180 IEMAPCLIIIDEIDIVTPKREGSNREMERRLVSQFANCLDKIS-GKFVVVVGTTSRPDSI 238

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY 619
           +P +RR GR+DREI + M              P    R +IL  L   +    L ++V++
Sbjct: 239 DPIIRRNGRMDREISMPM--------------PDENARKDILQVLCKEVN---LRNDVDF 281

Query: 620 --LSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDTMLQD 676
             +S  T GFVGADL  L NEAAL+ + + Y + +  ++ + S  TL       D  + D
Sbjct: 282 REISRKTPGFVGADLKTLINEAALIRVNKLYKRFKLDNNAMDSQSTL-----SFDLQIPD 336

Query: 677 SDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFM 736
           +     I E+  +  D     T+     LL   +P          N+ N           
Sbjct: 337 NQAIPEIVETPSEMTDGGQTNTT-----LLEKPIP----------NYSN----------F 371

Query: 737 SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
               C +  E  D  +A   V PS+ RE    +P + WE+VG   E++  L   +  P K
Sbjct: 372 DLSSCLVSHE--DILEALENVTPSSRREGFTTIPDISWENVGALNELRVDLELRIISPIK 429

Query: 797 HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
           +   + R G   P+G+L++GPPGC KTL+A+A+A E+G NF++++GPEL +K+VGESEKA
Sbjct: 430 NSHIYDRFGLETPSGVLLYGPPGCGKTLLAKAIAKESGANFISIRGPELLNKYVGESEKA 489

Query: 857 VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
           VR++F +ARA+AP I+FFDE+D L A R  E +G   ++RV++QLL ELDG+ +R  V V
Sbjct: 490 VRTVFERARASAPCIVFFDELDSLCAARSSEGNG--ATERVVNQLLTELDGVGERRKVFV 547

Query: 917 IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
           +AATNRPD IDPA++RPGR DR++YV  PNE  R +I     +K P + DV++R ++  +
Sbjct: 548 VAATNRPDIIDPAMMRPGRLDRIIYVPLPNEMGRLDILMKVSKKTPLAKDVDLRVISKNT 607

Query: 977 EGCTGADISLICREAAISAIEE 998
           +G +GAD+S + REA + A+++
Sbjct: 608 QGFSGADLSQLIREATLKALDK 629


>gi|407463397|ref|YP_006774714.1| ATPase AAA [Candidatus Nitrosopumilus koreensis AR1]
 gi|407047019|gb|AFS81772.1| ATPase AAA [Candidatus Nitrosopumilus koreensis AR1]
          Length = 713

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/619 (38%), Positives = 335/619 (54%), Gaps = 106/619 (17%)

Query: 412  KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
            +LGGL  E   +++++ +          +G+   KGVLL+GPPGTGKT LA+  A ++  
Sbjct: 178  ELGGLKNEVQKIREMVELPMRHPELFDKIGVEAPKGVLLYGPPGTGKTLLAKAVAGETNA 237

Query: 471  NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM 530
            +  +++GPE++ + YGESE+ + E+F+ A +++P+++FIDE+D+IAP R +   E+ +R+
Sbjct: 238  HFISLSGPEIMGKYYGESEEKIREIFNQAEENSPSIIFIDEIDSIAPKRDEVSGEVEKRI 297

Query: 531  VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
            V+ LL LMDG+     V+VIAATNRPDSI+PALRRPGR DREIEI               
Sbjct: 298  VSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEI--------------G 343

Query: 591  VPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLRRY- 647
            +P    R EIL     GM    +D +V+   +S  THGFVGADL  L  EAA+  LRR  
Sbjct: 344  IPDDEGRFEILSIHTRGMP---IDEKVDLKQISKTTHGFVGADLEVLSKEAAMRSLRRIL 400

Query: 648  SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLS 707
              I    D + S             +LQ  + +   +E  RD L    P           
Sbjct: 401  PDIDLDEDKISS------------EILQKIEIT---SEDFRDALKEVRPS---------- 435

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
                    + E+     N   D  GG+        LK EL               RE   
Sbjct: 436  -------ALREVQVQIPNVSWDDVGGL------DELKEEL---------------REA-- 465

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
                V+W                   P K++EAF  +    P GIL+ GPPG  KTL+A+
Sbjct: 466  ----VEW-------------------PIKYKEAFDYVDVETPKGILLHGPPGTGKTLIAK 502

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            A+A     NF+++KGPEL SKWVGESEK VR +F KAR  AP IIF DEID L   RG  
Sbjct: 503  ALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKARQAAPCIIFLDEIDALVPRRGSS 562

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
                 V++ V+SQ+L E+DGL +  NV ++ ATNR D +D ALLRPGRFDR++ V  P+ 
Sbjct: 563  GSESHVTESVVSQILTEIDGLEELHNVLIVGATNRLDIVDDALLRPGRFDRIIEVPNPDA 622

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------ENL 1000
              R+ IF IH +K P +SDVNI +L  L++G +GA+I+ +   AAI+A++       +N+
Sbjct: 623  KGRQNIFEIHTKKKPLASDVNIAKLVELTDGFSGAEIAAVANRAAIAALKKYVGGKAQNV 682

Query: 1001 DASRITMQHLKTAIRHVQP 1019
               +I+ Q L  AI  V+P
Sbjct: 683  KDIKISQQELIDAIDKVKP 701



 Score =  225 bits (574), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 111/276 (40%), Positives = 170/276 (61%), Gaps = 17/276 (6%)

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            S  + V + VP++ ++++GG +    ++ E VE P +H E F +IG   P G+L++GPPG
Sbjct: 162  SMTKAVDVSVPRITYDELGGLKNEVQKIREMVELPMRHPELFDKIGVEAPKGVLLYGPPG 221

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
              KTL+A+AVA E   +F+++ GPE+  K+ GESE+ +R +F +A  N+PSIIF DEID 
Sbjct: 222  TGKTLLAKAVAGETNAHFISLSGPEIMGKYYGESEEKIREIFNQAEENSPSIIFIDEIDS 281

Query: 880  LAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            +A  R + S    V  R++SQLL  +DG+  R  V VIAATNRPD IDPAL RPGRFDR 
Sbjct: 282  IAPKRDEVSG--EVEKRIVSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDRE 339

Query: 940  LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-- 997
            + +G P++  R EI  IH R +P    V++++++  + G  GAD+ ++ +EAA+ ++   
Sbjct: 340  IEIGIPDDEGRFEILSIHTRGMPIDEKVDLKQISKTTHGFVGADLEVLSKEAAMRSLRRI 399

Query: 998  -------------ENLDASRITMQHLKTAIRHVQPS 1020
                         E L    IT +  + A++ V+PS
Sbjct: 400  LPDIDLDEDKISSEILQKIEITSEDFRDALKEVRPS 435



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 150/287 (52%), Gaps = 28/287 (9%)

Query: 385 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
           K +R   L   Q++  NV          +GGL +    L++ +      K     + +  
Sbjct: 430 KEVRPSALREVQVQIPNVSW------DDVGGLDELKEELREAVEWPIKYKEAFDYVDVET 483

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
            KG+LLHGPPGTGKT +A+  A  +  N  ++ GPE++S+  GESE+ + E+F  A Q+A
Sbjct: 484 PKGILLHGPPGTGKTLIAKALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKARQAA 543

Query: 504 PAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           P ++F+DE+DA+ P R   G E  +++ +V+ +L  +DG+     VL++ ATNR D ++ 
Sbjct: 544 PCIIFLDEIDALVPRRGSSGSESHVTESVVSQILTEIDGLEELHNVLIVGATNRLDIVDD 603

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP-AQRLEILHALLSGMEHSLLDSEVEYL 620
           AL RPGR DR IE                VP+P A+  + +  + +  +    D  +  L
Sbjct: 604 ALLRPGRFDRIIE----------------VPNPDAKGRQNIFEIHTKKKPLASDVNIAKL 647

Query: 621 SMATHGFVGADLAALCNEAALVCLRRY--SKIQTSSDVLHSTGTLFE 665
              T GF GA++AA+ N AA+  L++Y   K Q   D+  S   L +
Sbjct: 648 VELTDGFSGAEIAAVANRAAIAALKKYVGGKAQNVKDIKISQQELID 694


>gi|341865581|ref|NP_001230076.1| nuclear valosin-containing protein-like isoform 4 [Homo sapiens]
 gi|194389988|dbj|BAG60510.1| unnamed protein product [Homo sapiens]
          Length = 765

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/603 (39%), Positives = 329/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 202  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 261

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 262  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 321

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 322  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 364

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 365  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ------------------ 406

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                                  +P   DLP+  +          SE  D     +     
Sbjct: 407  --------------------KKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRD 446

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 447  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 506

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 507  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 566

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 567  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 624

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 625  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 684

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +++ +H + A + V
Sbjct: 685  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKV 744

Query: 1018 QPS 1020
            + S
Sbjct: 745  RSS 747



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 147/259 (56%), Gaps = 14/259 (5%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
           L+ VD E   +  + +  R +  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 144 LQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 198

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
           +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 199 YHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 258

Query: 861 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
           F +A +NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 259 FEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 316

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      +   LA L+ 
Sbjct: 317 GATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTP 376

Query: 978 GCTGADISLICREAAISAI 996
           G  GAD+  +CREAA+ A+
Sbjct: 377 GFVGADLMALCREAAMCAV 395



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 474 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 531

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 532 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 591

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 592 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 651

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 652 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 697

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 698 TGADLSALVREASICALRQEMARQKSGN 725


>gi|449480824|ref|XP_004156006.1| PREDICTED: LOW QUALITY PROTEIN: cell division control protein 48
            homolog C-like [Cucumis sativus]
          Length = 816

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 243/656 (37%), Positives = 345/656 (52%), Gaps = 116/656 (17%)

Query: 413  LGGLSKEYAILK-DIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            LGG+      LK ++I+          +G+RP  G+LLHGPPG GKT LA   A+++GV 
Sbjct: 240  LGGMKSVLDELKMEVIVPLYHPQVPLXVGVRPMAGILLHGPPGCGKTKLAHAIANETGVP 299

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             + ++  E++S   G SE+ + E+F  A ++AP++VFIDE+DAIA  R++   E+ +R+V
Sbjct: 300  FYKISATEIMSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIV 359

Query: 532  ATLLNLMDGV-----------------CRTDGVLVIAATNRPDSIEPALRRPGRLDREIE 574
              L+  MDG                   R   VLVI ATNRPD+++PALRRPGR DREI 
Sbjct: 360  TQLMTCMDGFHKLVDSKDASSKDDNSNVRPGYVLVIGATNRPDAVDPALRRPGRFDREIV 419

Query: 575  IDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADL 632
            +               VP    R EIL  L S +    L+   + L +A  T GFVGADL
Sbjct: 420  L--------------GVPDENARAEILTVLTSNLR---LEGSFDLLKIARATPGFVGADL 462

Query: 633  AALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLD 692
             AL N+A  + ++R                          ++    C     E S DC  
Sbjct: 463  TALANKAGNLAMKR--------------------------IIDQRKC-----ELSTDC-- 489

Query: 693  SASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEK 752
                                       A N H  + D     ++ E+   L + + DFE+
Sbjct: 490  ---------------------------AANEH--IEDWWRQPWLPEEMEKLAITMTDFEE 520

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            A   V+PS  RE    +P VKWEDVGG  +++ +    V    K+ E ++  G    TG 
Sbjct: 521  AIQMVQPSLRREGFSAIPSVKWEDVGGLEQLRAEFDRYVVRRVKYPEDYEGFGVDLATGF 580

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L++GPPGC KTL+A+AVA+EAG NF+ +KGPEL +K+VGESE AVR+LF++AR  +P I+
Sbjct: 581  LLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCIL 640

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLR 932
            FFDE+D L   RGKE  G  V +R+++QLL+ELDG  QR  V VI ATNRP+ IDPA+LR
Sbjct: 641  FFDEVDALTTKRGKE--GGWVVERLLNQLLIELDGAEQRRGVFVIGATNRPEVIDPAILR 698

Query: 933  PGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS--EGCTGADISLICRE 990
            PGRF +LLYV  P  T+R  + +   RK P    V++  +  +   E  +GAD++ +  E
Sbjct: 699  PGRFGKLLYVPLPGPTERGLVLKALGRKKPIDVSVDLLAIGQMEACENFSGADLAALMNE 758

Query: 991  AAISAIEENLD---------ASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            AA+ A+EE L          +  I M H +  +  + PS    + H Y+ LS   +
Sbjct: 759  AAMVALEEKLTLDNSNIESASCTIKMVHFERGLTKISPSVSEKQKHFYEILSKSLK 814



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 159/325 (48%), Gaps = 64/325 (19%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            ++D+GG + V  +L   V  P  H +    +G RP  GIL+ GPPGC KT +A A+A+E 
Sbjct: 237  FKDLGGMKSVLDELKMEVIVPLYHPQVPLXVGVRPMAGILLHGPPGCGKTKLAHAIANET 296

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            G+ F  +   E+ S   G SE+ +R LF+KA   APSI+F DEID +A+ R  E+    +
Sbjct: 297  GVPFYKISATEIMSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKR--ENLQREM 354

Query: 894  SDRVMSQLLVELDGLHQRVN-----------------VTVIAATNRPDKIDPALLRPGRF 936
              R+++QL+  +DG H+ V+                 V VI ATNRPD +DPAL RPGRF
Sbjct: 355  EKRIVTQLMTCMDGFHKLVDSKDASSKDDNSNVRPGYVLVIGATNRPDAVDPALRRPGRF 414

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + +G P+E  R EI  +    +      ++ ++A  + G  GAD++ +  +A   A+
Sbjct: 415  DREIVLGVPDENARAEILTVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGNLAM 474

Query: 997  EENLDASR------------------------------ITMQHLKTAIRHVQPS------ 1020
            +  +D  +                              ITM   + AI+ VQPS      
Sbjct: 475  KRIIDQRKCELSTDCAANEHIEDWWRQPWLPEEMEKLAITMTDFEEAIQMVQPSLRREGF 534

Query: 1021 ---------EIHSYKELSAKFQRLV 1036
                     ++   ++L A+F R V
Sbjct: 535  SAIPSVKWEDVGGLEQLRAEFDRYV 559



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 131/252 (51%), Gaps = 27/252 (10%)

Query: 399 FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVK--STLSSLGLRPTKGVLLHGPPGTG 456
           F  + +   +D+  L  L  E+    D  +   VK        G+    G LL+GPPG G
Sbjct: 534 FSAIPSVKWEDVGGLEQLRAEF----DRYVVRRVKYPEDYEGFGVDLATGFLLYGPPGCG 589

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT +A+  A+++G N   + GPE++++  GESE A+  +F  A   +P ++F DE+DA+ 
Sbjct: 590 KTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALT 649

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
             R   G  + +R++  LL  +DG  +  GV VI ATNRP+ I+PA+ RPGR  + + + 
Sbjct: 650 TKRGKEGGWVVERLLNQLLIELDGAEQRRGVFVIGATNRPEVIDPAILRPGRFGKLLYVP 709

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM----ATHGFVGADL 632
           +              P P +R  +L AL        +D  V+ L++    A   F GADL
Sbjct: 710 L--------------PGPTERGLVLKAL---GRKKPIDVSVDLLAIGQMEACENFSGADL 752

Query: 633 AALCNEAALVCL 644
           AAL NEAA+V L
Sbjct: 753 AALMNEAAMVAL 764


>gi|67623819|ref|XP_668192.1| AAA ATPase [Cryptosporidium hominis TU502]
 gi|54659385|gb|EAL37964.1| AAA ATPase [Cryptosporidium hominis]
          Length = 690

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/621 (36%), Positives = 344/621 (55%), Gaps = 76/621 (12%)

Query: 401 NVQATVEQDISKLGGLSKEYAI-------LKDIIISSSVKSTLSSLGLRPTK-------- 445
           N +  VE D   LG LS+ ++        LKDI    ++   +    +RP K        
Sbjct: 57  NEEFGVESD--GLGNLSQNFSFENPPKLSLKDIAGIENIIRDIEEFVIRPLKLPDIYKAV 114

Query: 446 ------GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
                 GVLL GPPGTGK+ L+   A + G+  F ++GP +++   G SE +L ++FD A
Sbjct: 115 GVNSPCGVLLQGPPGTGKSYLSMCIAGELGLPFFKLSGPNIINGVSGTSEASLRKLFDDA 174

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
            + AP ++ IDE+D + P R+    E+ +R+V+   N +D +     ++V+  T+RPDSI
Sbjct: 175 IEMAPCLIIIDEIDIVTPKREGSNREMERRLVSQFANCLDKIS-GKFIVVVGTTSRPDSI 233

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVE 618
           +P +RR GR+DREI + M              P    R +IL  L    E +L D  +  
Sbjct: 234 DPIIRRNGRMDREISMPM--------------PDENARKDILQVLCK--EVNLRDDVDFR 277

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDS 677
            +S  T GFVGADL  L NEAAL+ + + Y + +  ++ + S  TL       D  + D+
Sbjct: 278 EISRKTPGFVGADLKTLINEAALIRVNKLYKRFKLDNNAMDSQSTL-----SFDLQIPDN 332

Query: 678 DCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMS 737
                I E+  +  D     T+     LL   +P          N+ N            
Sbjct: 333 QAMPEIVETPSEMTDGGQTNTT-----LLEKPIP----------NYSN----------FD 367

Query: 738 EKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKH 797
              C +  E  D  +A   V PS+ RE    +P + WE+VG   E++  L   +  P K+
Sbjct: 368 LSSCLVSHE--DILEALENVTPSSRREGFTTIPDISWENVGALNELRVDLELRIISPIKN 425

Query: 798 QEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 857
              + R G   P+G+L++GPPGC KTL+A+A+A E+G NF++++GPEL +K+VGESEKAV
Sbjct: 426 SHIYDRFGLETPSGVLLYGPPGCGKTLLAKAIAKESGANFISIRGPELLNKYVGESEKAV 485

Query: 858 RSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVI 917
           R++F +ARA+AP I+FFDE+D L A R  E +G   ++RV++QLL ELDG+ +R  V V+
Sbjct: 486 RTVFERARASAPCIVFFDELDSLCAARSSEGNG--ATERVVNQLLTELDGVGERRKVFVV 543

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
           AATNRPD IDPA++RPGR DR++YV  PNE  R +I     +K P + DV++R ++  ++
Sbjct: 544 AATNRPDIIDPAMMRPGRLDRVIYVPLPNEMGRLDILMKVSKKTPLAKDVDLRVISKNTQ 603

Query: 978 GCTGADISLICREAAISAIEE 998
           G +GAD+S + REA + A+++
Sbjct: 604 GFSGADLSQLIREATLKALDK 624


>gi|213409838|ref|XP_002175689.1| ribosome biogenesis ATPase RIX7 [Schizosaccharomyces japonicus
            yFS275]
 gi|212003736|gb|EEB09396.1| ribosome biogenesis ATPase RIX7 [Schizosaccharomyces japonicus
            yFS275]
          Length = 782

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 237/633 (37%), Positives = 352/633 (55%), Gaps = 83/633 (13%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G++P +GVLLHGPPG GKT LA   A++ GV   +++ P +VS   GESE+ + +VF+ A
Sbjct: 203  GIQPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVRDVFEEA 262

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
               AP ++FIDE+DA+ P R+    E+ +R+VA  L  MD +   +T+G  V+V+ ATNR
Sbjct: 263  KSMAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDDLSFEKTEGKPVIVMGATNR 322

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PD+++ ALRR GR DREI +               VP    R +IL  +  G+    L  
Sbjct: 323  PDALDSALRRAGRFDREICL--------------TVPDELAREKILRTMSRGLR---LSG 365

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
            E ++  +A  T GFVGADL AL   A +V ++R Y ++    D   S+        ++ +
Sbjct: 366  EFDFRKLAKRTPGFVGADLKALTTAAGIVAIKRIYRQLILQKDAASSSSP------NTPS 419

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
            + QD     ++       LD+ +P                  ++S I  +F N   D+  
Sbjct: 420  IDQDLTSGDDVAME----LDTTNP-----------------PSLSSIIHHFVNSHPDA-- 456

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
                 E+   L++   DF +A  KV+PS+ RE    VP V W DVG  + ++ +L  A+ 
Sbjct: 457  --LTEEELEPLRISEDDFLEALPKVQPSSKREGFATVPDVTWADVGALKPIRVELQMAIV 514

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P K  E +  +G   P G+L++GPPGC KTL+A+AVA+E+  NF++V+GPEL +K+VGE
Sbjct: 515  QPIKRPELYHSVGISAPAGVLLWGPPGCGKTLLAKAVANESKANFISVRGPELLNKFVGE 574

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQR 911
            SE+AVR +F +ARA+AP IIFFDE+D L   R    D +S  S R+++ LL ELDGL+ R
Sbjct: 575  SERAVRQVFLRARASAPCIIFFDELDALVPRR---DDSLSESSSRIVNTLLTELDGLNDR 631

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRE 971
              V VIAATNRPD IDPA++RPGR D+ L V  P   +R EI +   +K P   DVN+  
Sbjct: 632  KGVYVIAATNRPDIIDPAMIRPGRLDKTLLVDLPTANERAEILKTITKKTPLHEDVNLET 691

Query: 972  LACLSEGC---TGADISLICREAAISAIEENL-----------------DASRITMQHLK 1011
            LA   E C   +GAD++ + RE+A++A+   +                 +  ++TM    
Sbjct: 692  LAH-DERCVNFSGADLAALVRESAVTALRSAVFSDIASNEPEVTEHASSEPIQVTMADFN 750

Query: 1012 TAIRHVQPSEIHSYKELSAKFQRLVHSNAEADE 1044
             A R+++PS     ++   K+QRL    + A E
Sbjct: 751  FAFRNIKPSVSDRDRQ---KYQRLAKRWSSAAE 780



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 140/244 (57%), Gaps = 14/244 (5%)

Query: 758 RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
           RP AM         V  +DVGG  +   +++E +  P KH E +   G +PP G+L+ GP
Sbjct: 164 RPKAM--------NVTLDDVGGLDDCINEVLELIAMPIKHPEVYLFTGIQPPRGVLLHGP 215

Query: 818 PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
           PGC KT++A A+A+E G+ F+++  P + S   GESEK VR +F +A++ AP ++F DEI
Sbjct: 216 PGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVRDVFEEAKSMAPCLMFIDEI 275

Query: 878 DGLAAIRGKESDGVSVSDRVMSQLLVELDGLH----QRVNVTVIAATNRPDKIDPALLRP 933
           D +   R  ES    +  R+++Q L  +D L     +   V V+ ATNRPD +D AL R 
Sbjct: 276 DAVTPKR--ESAQREMERRIVAQFLTCMDDLSFEKTEGKPVIVMGATNRPDALDSALRRA 333

Query: 934 GRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAI 993
           GRFDR + +  P+E  RE+I R   R +  S + + R+LA  + G  GAD+  +   A I
Sbjct: 334 GRFDREICLTVPDELAREKILRTMSRGLRLSGEFDFRKLAKRTPGFVGADLKALTTAAGI 393

Query: 994 SAIE 997
            AI+
Sbjct: 394 VAIK 397



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 21/212 (9%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
           S+G+    GVLL GPPG GKT LA+  A++S  N  +V GPE++++  GESE+A+ +VF 
Sbjct: 525 SVGISAPAGVLLWGPPGCGKTLLAKAVANESKANFISVRGPELLNKFVGESERAVRQVFL 584

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            A  SAP ++F DELDA+ P R D   E S R+V TLL  +DG+    GV VIAATNRPD
Sbjct: 585 RARASAPCIIFFDELDALVPRRDDSLSESSSRIVNTLLTELDGLNDRKGVYVIAATNRPD 644

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            I+PA+ RPGRLD+ + +D+              P+  +R EIL  +    + + L  +V
Sbjct: 645 IIDPAMIRPGRLDKTLLVDL--------------PTANERAEILKTI---TKKTPLHEDV 687

Query: 618 EYLSMATH----GFVGADLAALCNEAALVCLR 645
              ++A       F GADLAAL  E+A+  LR
Sbjct: 688 NLETLAHDERCVNFSGADLAALVRESAVTALR 719


>gi|119590121|gb|EAW69715.1| nuclear VCP-like, isoform CRA_b [Homo sapiens]
          Length = 687

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/603 (39%), Positives = 329/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 124  LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 183

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 184  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 243

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 244  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 286

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 287  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ------------------ 328

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                                  +P   DLP+  +          SE  D     +     
Sbjct: 329  --------------------KKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRD 368

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 369  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 428

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 429  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 488

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 489  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 546

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 547  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 606

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +++ +H + A + V
Sbjct: 607  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKV 666

Query: 1018 QPS 1020
            + S
Sbjct: 667  RSS 669



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 147/259 (56%), Gaps = 14/259 (5%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
           L+ VD E   +  + +  R +  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 66  LQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 120

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
           +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 121 YHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 180

Query: 861 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
           F +A +NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 181 FEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 238

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      +   LA L+ 
Sbjct: 239 GATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTP 298

Query: 978 GCTGADISLICREAAISAI 996
           G  GAD+  +CREAA+ A+
Sbjct: 299 GFVGADLMALCREAAMCAV 317



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 396 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 453

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 454 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 513

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 514 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 573

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 574 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 619

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 620 TGADLSALVREASICALRQEMARQKSGN 647


>gi|161527523|ref|YP_001581349.1| ATPase AAA [Nitrosopumilus maritimus SCM1]
 gi|160338824|gb|ABX11911.1| AAA family ATPase, CDC48 subfamily [Nitrosopumilus maritimus SCM1]
          Length = 713

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 235/619 (37%), Positives = 331/619 (53%), Gaps = 106/619 (17%)

Query: 412  KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
            +LGGL  E   +++++ +          +G+   KGVLL+GPPGTGKT LA+  A ++  
Sbjct: 178  ELGGLKNEVQKIREMVELPMRHPELFDKIGVEAPKGVLLYGPPGTGKTLLAKAVAGETNA 237

Query: 471  NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM 530
            +  +++GPE++ + YGESE+ + E+F+ A +++P+++FIDE+D+IAP R +   E+ +R+
Sbjct: 238  HFISLSGPEIMGKYYGESEEKIREIFNQAEENSPSIIFIDEIDSIAPKRDEVSGEVEKRI 297

Query: 531  VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
            V+ LL LMDG+     V+VIAATNRPDSI+PALRRPGR DREIEI               
Sbjct: 298  VSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEI--------------G 343

Query: 591  VPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLRRY- 647
            +P    R EIL     GM    +D +V+   +S  THGFVGADL  L  EAA+  LRR  
Sbjct: 344  IPDDEGRFEILSIHTRGMP---IDEKVDLKQISKTTHGFVGADLEVLSKEAAMRSLRRIL 400

Query: 648  SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLS 707
             +I    D +            S  +LQ  + +   +E  RD L    P           
Sbjct: 401  PEIDLDEDKI------------SAEILQKIEIT---SEDFRDALKEVRPS---------- 435

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
                    + E+     N   D  GG+        LK EL               RE   
Sbjct: 436  -------ALREVQVQIPNVSWDDVGGL------DELKEEL---------------REA-- 465

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
                V+W                   P KH+EAF  +    P GIL+ GPPG  KTL+A+
Sbjct: 466  ----VEW-------------------PIKHKEAFDYVDVETPKGILLHGPPGTGKTLIAK 502

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            A+A     NF+++KGPEL SKWVGESEK VR +F KAR  AP IIF DE+D L   RG  
Sbjct: 503  ALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKARQAAPCIIFLDEVDALVPRRGSG 562

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
                 V++ V+SQ+L E+DGL +  NV ++ ATNR D +D ALLRPGRFDR++ V  P+ 
Sbjct: 563  GSESHVTESVVSQILTEIDGLEELHNVLIVGATNRLDIVDDALLRPGRFDRIIEVPNPDA 622

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR-------EAAISAIEENL 1000
              R  IF IH +K P +SDV+I +L  L++G +GA+I+ +         +  +S   +N+
Sbjct: 623  KGRRNIFEIHTKKKPLASDVDIAKLVELTDGFSGAEIAAVANRAAIAALKKYVSGKAQNV 682

Query: 1001 DASRITMQHLKTAIRHVQP 1019
               +I+ Q L  AI  V+P
Sbjct: 683  KDIKISQQELVDAIDKVKP 701



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/267 (41%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP++ ++++GG +    ++ E VE P +H E F +IG   P G+L++GPPG  KTL+A+A
Sbjct: 171  VPRITYDELGGLKNEVQKIREMVELPMRHPELFDKIGVEAPKGVLLYGPPGTGKTLLAKA 230

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA E   +F+++ GPE+  K+ GESE+ +R +F +A  N+PSIIF DEID +A  R + S
Sbjct: 231  VAGETNAHFISLSGPEIMGKYYGESEEKIREIFNQAEENSPSIIFIDEIDSIAPKRDEVS 290

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V  R++SQLL  +DG+  R  V VIAATNRPD IDPAL RPGRFDR + +G P++ 
Sbjct: 291  G--EVEKRIVSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEIGIPDDE 348

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDAS 1003
             R EI  IH R +P    V++++++  + G  GAD+ ++ +EAA+ ++     E +LD  
Sbjct: 349  GRFEILSIHTRGMPIDEKVDLKQISKTTHGFVGADLEVLSKEAAMRSLRRILPEIDLDED 408

Query: 1004 R----------ITMQHLKTAIRHVQPS 1020
            +          IT +  + A++ V+PS
Sbjct: 409  KISAEILQKIEITSEDFRDALKEVRPS 435



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 147/277 (53%), Gaps = 26/277 (9%)

Query: 385 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPT 444
           K +R   L   Q++  NV      D+  L  L +E     +  I    K     + +   
Sbjct: 430 KEVRPSALREVQVQIPNVSW---DDVGGLDELKEELREAVEWPIKH--KEAFDYVDVETP 484

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           KG+LLHGPPGTGKT +A+  A  +  N  ++ GPE++S+  GESE+ + E+F  A Q+AP
Sbjct: 485 KGILLHGPPGTGKTLIAKALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKARQAAP 544

Query: 505 AVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPA 562
            ++F+DE+DA+ P R  GG E  +++ +V+ +L  +DG+     VL++ ATNR D ++ A
Sbjct: 545 CIIFLDEVDALVPRRGSGGSESHVTESVVSQILTEIDGLEELHNVLIVGATNRLDIVDDA 604

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP-AQRLEILHALLSGMEHSLLDSEVEYLS 621
           L RPGR DR IE                VP+P A+    +  + +  +    D ++  L 
Sbjct: 605 LLRPGRFDRIIE----------------VPNPDAKGRRNIFEIHTKKKPLASDVDIAKLV 648

Query: 622 MATHGFVGADLAALCNEAALVCLRRY--SKIQTSSDV 656
             T GF GA++AA+ N AA+  L++Y   K Q   D+
Sbjct: 649 ELTDGFSGAEIAAVANRAAIAALKKYVSGKAQNVKDI 685


>gi|15082383|gb|AAH12105.1| NVL protein [Homo sapiens]
 gi|325464593|gb|ADZ16067.1| nuclear VCP-like [synthetic construct]
          Length = 659

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/603 (39%), Positives = 329/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 96   LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 155

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 156  AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 215

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 216  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 258

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 259  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ------------------ 300

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                                  +P   DLP+  +          SE  D     +     
Sbjct: 301  --------------------KKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRD 340

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 341  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 400

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 401  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 460

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 461  ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 518

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 519  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 578

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +++ +H + A + V
Sbjct: 579  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKV 638

Query: 1018 QPS 1020
            + S
Sbjct: 639  RSS 641



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/263 (40%), Positives = 148/263 (56%), Gaps = 14/263 (5%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
            L+ VD E   +  + +  R +  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 38   LQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 92

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
            +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 93   YHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 152

Query: 861  FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
            F +A +NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 153  FEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 210

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
             ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      +   LA L+ 
Sbjct: 211  GATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTP 270

Query: 978  GCTGADISLICREAAISAIEENL 1000
            G  GAD+  +CREAA+ A+   L
Sbjct: 271  GFVGADLMALCREAAMCAVNRVL 293



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 368 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 425

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 426 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 485

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 486 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 545

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 546 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 591

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 592 TGADLSALVREASICALRQEMARQKSGN 619


>gi|328768110|gb|EGF78157.1| hypothetical protein BATDEDRAFT_13267 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 611

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 232/611 (37%), Positives = 337/611 (55%), Gaps = 83/611 (13%)

Query: 410  ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGG+ +    L  ++ +          LG+   +G+LLHGPPG GKT LAR  A ++
Sbjct: 18   LSDLGGIEQIVQELNHLVCMPLGHPEIYRHLGVDLPRGILLHGPPGCGKTMLARAIAGEA 77

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV   ++  P +VS   GESE+ + EVF+ A   AP ++FIDE+DAI P R+    E+ +
Sbjct: 78   GVPFISIAAPVIVSGMSGESEKKIREVFEEAKSLAPCILFIDEIDAITPKRETAQREMER 137

Query: 529  RMVATLLNLMDGVCRTDG---------------VLVIAATNRPDSIEPALRRPGRLDREI 573
            R+VA LL  MD +   D                V++I ATNRPDSI+PALRR GR DREI
Sbjct: 138  RIVAQLLTSMDSLSPQDTSFDGSLDVQTDDYKHVMIIGATNRPDSIDPALRRAGRFDREI 197

Query: 574  EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGAD 631
             +              AVP    R+ IL  L   M    LD   ++  +A  T G+VGAD
Sbjct: 198  CM--------------AVPDENARMHILQKLAKKMR---LDGGFDFRDLARKTPGYVGAD 240

Query: 632  LAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCL 691
            L +L  EA ++ + R   I + S  LH           SD M    +   + TE      
Sbjct: 241  LNSLTAEAGMIAIDRI--INSLSYKLHD---------QSDQMDITMNTPLDDTEK----- 284

Query: 692  DSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFE 751
                  T  +   L+S   P++                        E+   L +   DF 
Sbjct: 285  ------TLYMSRFLISHPEPMK-----------------------QEELDLLSITFADFL 315

Query: 752  KARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTG 811
            +A  KV+PS+ RE    VP V W+D+G    V+ +L  AV  P +H E F ++G     G
Sbjct: 316  EALKKVQPSSKREGFATVPDVSWDDIGSLANVRDELRMAVVEPIRHPEYFAKVGITSSMG 375

Query: 812  ILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSI 871
            +L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+AVR++FA+A+A++P +
Sbjct: 376  VLLYGPPGCGKTLLAKAVANESHCNFISIKGPELLNKYVGESERAVRTVFARAQASSPCV 435

Query: 872  IFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALL 931
            IFFDE+D L   R  +++  S S R+++ LL E+DG+  R  V VIAATNRPD IDPA++
Sbjct: 436  IFFDELDALCPSRSNDAESQSAS-RLVNTLLTEMDGMQGRKQVFVIAATNRPDMIDPAMM 494

Query: 932  RPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELA--CLSEGCTGADISLICR 989
            RPGR D+ LYV  PN ++R EI +   RK P S  ++++ ++     EG +GAD++ + R
Sbjct: 495  RPGRLDKTLYVDLPNASERYEILKTLTRKTPLSPLLDLQTVSNDARCEGLSGADLASLVR 554

Query: 990  EAAISAIEENL 1000
            EAA+SA+ +  
Sbjct: 555  EAAVSALRDTF 565



 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 142/249 (57%), Gaps = 17/249 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +PK +  D+GG  ++  +L   V  P  H E ++ +G   P GIL+ GPPGC KT++ARA
Sbjct: 13   IPKNRLSDLGGIEQIVQELNHLVCMPLGHPEIYRHLGVDLPRGILLHGPPGCGKTMLARA 72

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A EAG+ F+++  P + S   GESEK +R +F +A++ AP I+F DEID +   R  E+
Sbjct: 73   IAGEAGVPFISIAAPVIVSGMSGESEKKIREVFEEAKSLAPCILFIDEIDAITPKR--ET 130

Query: 889  DGVSVSDRVMSQLLVELDGLHQR---------------VNVTVIAATNRPDKIDPALLRP 933
                +  R+++QLL  +D L  +                +V +I ATNRPD IDPAL R 
Sbjct: 131  AQREMERRIVAQLLTSMDSLSPQDTSFDGSLDVQTDDYKHVMIIGATNRPDSIDPALRRA 190

Query: 934  GRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAI 993
            GRFDR + +  P+E  R  I +   +K+      + R+LA  + G  GAD++ +  EA +
Sbjct: 191  GRFDREICMAVPDENARMHILQKLAKKMRLDGGFDFRDLARKTPGYVGADLNSLTAEAGM 250

Query: 994  SAIEENLDA 1002
             AI+  +++
Sbjct: 251  IAIDRIINS 259


>gi|340709576|ref|XP_003393381.1| PREDICTED: nuclear valosin-containing protein-like [Bombus
            terrestris]
          Length = 933

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/652 (36%), Positives = 363/652 (55%), Gaps = 52/652 (7%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
             + +GG  K    +  ++           LG+ P +G LLHGPPG GKT +A   A +  
Sbjct: 276  FADIGGNDKALKTVCKLLAHMKHPEIFKQLGISPPRGFLLHGPPGCGKTLMAYAIAGELD 335

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            + L  V  PE+V+   GESE  + E+F+ A   AP V+F+DE+DA+AP R     E+ +R
Sbjct: 336  IPLLKVAAPELVAGVSGESEARIRELFEQALAIAPCVIFLDEIDAVAPHRATAQREMERR 395

Query: 530  MVATLLNLMDGVCRTDG---VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +VA LL+ +D +   +    VLV+ ATNRPDS++PALRR GR D E+ +           
Sbjct: 396  IVAQLLSCLDELSLKENGTRVLVLGATNRPDSLDPALRRAGRFDHEVCL----------- 444

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCL 644
                +P    R +IL       E   L   V   ++A  T GFVGADL AL  EAA+  +
Sbjct: 445  ---GIPDRDARAKILAV---HTEKVALAPNVSLSTIASLTPGFVGADLVALIREAAMAAM 498

Query: 645  RR-YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPT 703
             R    +++  D  + +  + E    ++   +  + S N+ E     ++ ++   +++P 
Sbjct: 499  DRILEDLKSVPD--NKSSQIPEHSTVTEKKTESFENSSNLVEEV--TIEPSTSNQNNVPK 554

Query: 704  -SLLSSSLPLRGTVSEIADNFHNGVSDSSGGM--------FMSEKGCALKLELVDFEKAR 754
             +  S++  L+ T+       ++   D +G +          SE+   L +E  DFE A 
Sbjct: 555  LNKTSNTESLQATLEMDVIQENSKSPDLTGLLTWLRNDPPLPSERLSNLCIEHNDFETAV 614

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
              ++PSA RE    VP V W+DVG  R+++ +L  A+  P +H E F  +G   PTG+L+
Sbjct: 615  HIIQPSAKREGFATVPDVTWDDVGSLRDIREELQMAILAPIRHSEQFIALGLTAPTGVLL 674

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
             GPPGC KTL+A+A+A+EAG+NF++VKGPEL + +VGESEKAVR  F +AR +AP +IFF
Sbjct: 675  CGPPGCGKTLLAKAIANEAGINFISVKGPELLNMYVGESEKAVRQCFIRARNSAPCVIFF 734

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DE+D L   R  E D  S + RV++Q+L E+DG+  R  V ++AA+NRPD IDPA+LRPG
Sbjct: 735  DELDALCP-RRSEGDN-SATSRVVNQMLTEMDGVEGRQGVFLMAASNRPDIIDPAVLRPG 792

Query: 935  RFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELACLS--EGCTGADISLICR 989
            R D++LYV  P   DR +I R   +   K   ++DVN+ E+   S  +G TGAD++ + R
Sbjct: 793  RLDKILYVDLPTSADRVDILRALTKNATKPKLAADVNLEEIGYNSKCDGYTGADLAALIR 852

Query: 990  EAAISAIEENLDAS-----RITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            EA I A+ E +D        I+M+H   A   ++PS    +I  Y++L   +
Sbjct: 853  EAGIEALRELMDMHYSGQPEISMRHFVVAFDKIRPSVQEKDIKHYEKLKKLY 904


>gi|426239521|ref|XP_004013669.1| PREDICTED: nuclear valosin-containing protein-like isoform 1 [Ovis
            aries]
          Length = 863

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/600 (40%), Positives = 334/600 (55%), Gaps = 64/600 (10%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V   EVVS   GESEQ L E+F+ 
Sbjct: 292  LGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQ 351

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 352  AVSSAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 411

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +   L ++
Sbjct: 412  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR--LPET 455

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
                +L+  T GFVGADL ALC EAA+  + R                L E +G    + 
Sbjct: 456  FHFRHLAHLTPGFVGADLMALCREAAMCAVNR---------------VLMELQGQKKGL- 499

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
                    +    ++    A P   D      + + P   T  E+      G+  +   +
Sbjct: 500  -------GLNPHKKNPEIEALPSEGDQEKR--TGAEPTSKTQEELQRLL--GLLRNQDPL 548

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
               E+   L +EL DF  A   V+PSA RE    VP V W D+G   +++ +L  A+  P
Sbjct: 549  -SEEQLKGLCIELNDFLVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAILAP 607

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
             ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE
Sbjct: 608  VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 667

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNV 914
            +AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V
Sbjct: 668  RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASV--RVVNQLLTEMDGLETRQQV 725

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRE 971
             ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+  
Sbjct: 726  FIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEA 785

Query: 972  LAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQPS 1020
            +A  L   C TGAD+S + REA+I A+++ +            +I+ +H + A + V+ S
Sbjct: 786  IAGDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKISQKHFEEAFKKVKSS 845



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/257 (40%), Positives = 148/257 (57%), Gaps = 10/257 (3%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW--PQKHQEAFK 802
           L+ VD E   +  + +  + + L++  VK+EDVGG     T L E  +     +H E ++
Sbjct: 234 LQEVDGEIEAVLQKKAKAKGLELQISSVKFEDVGGN---DTTLKEVCKMLIHMRHPEVYR 290

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +G  PP G+L+ GPPGC KTL+A A+A E  L  L V   E+ S   GESE+ +R LF 
Sbjct: 291 HLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFE 350

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAA 919
           +A ++AP I+F DEID +   R  E     +  R+++QLL  +D L+       V VI A
Sbjct: 351 QAVSSAPCILFIDEIDAITPKR--EIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGA 408

Query: 920 TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 979
           TNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      + R LA L+ G 
Sbjct: 409 TNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPETFHFRHLAHLTPGF 468

Query: 980 TGADISLICREAAISAI 996
            GAD+  +CREAA+ A+
Sbjct: 469 VGADLMALCREAAMCAV 485



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 142/266 (53%), Gaps = 21/266 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 572 PSAKREGFATVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 629

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 630 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 689

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R       S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 690 VDALCPRRSARETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 749

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 750 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 795

Query: 628 VGADLAALCNEAALVCLRRYSKIQTS 653
            GADL+AL  EA++  L++    Q S
Sbjct: 796 TGADLSALVREASICALKQEMARQKS 821


>gi|375083130|ref|ZP_09730162.1| CDC48/VCP like protein, AAA superfamily, partial [Thermococcus
            litoralis DSM 5473]
 gi|374742216|gb|EHR78622.1| CDC48/VCP like protein, AAA superfamily, partial [Thermococcus
            litoralis DSM 5473]
          Length = 535

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/563 (39%), Positives = 311/563 (55%), Gaps = 76/563 (13%)

Query: 504  PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPAL 563
            P+++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNRPD+++PAL
Sbjct: 1    PSIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLKSRGKVIVIGATNRPDAVDPAL 60

Query: 564  RRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA 623
            RRPGR DREIE+               VP    R EIL     GM               
Sbjct: 61   RRPGRFDREIEV--------------GVPDKQGRKEILQIHTRGMP-------------I 93

Query: 624  THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNI 683
               F   D+  +  E     L++  + + S+++      L + +   D   +D D  R +
Sbjct: 94   EPDFRKGDVKRILEE-----LKQDDRFRESAEM-----ALKKIDKTPD---KDEDIKRLL 140

Query: 684  TESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADN-------------FHNGVSDS 730
            +E      +       DL    L+      G V                      G  D 
Sbjct: 141  SEIDERLYEEVRHRLIDLLLEELAEKT--HGFVGADLAALAREAAMAALRRLIEEGKIDF 198

Query: 731  SGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEA 790
                   E    LK+   DF +A   V PSA+REV+LEVP V+WED+GG  +VK QL EA
Sbjct: 199  EAESIPKEVLEELKVTRRDFYEALKMVEPSALREVLLEVPNVRWEDIGGLEDVKQQLREA 258

Query: 791  VEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWV 850
            VEWP K+ EAF  +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+ ++GPE+ SKWV
Sbjct: 259  VEWPLKYPEAFMAMGITPPKGILLYGPPGTGKTLLAKAVATESEANFIGIRGPEVLSKWV 318

Query: 851  GESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ 910
            GESEK +R +F KAR  AP+++F DEID +A  RG  +D   V+DR+++QLL E+DG+ +
Sbjct: 319  GESEKNIREIFRKARQAAPTVVFIDEIDAIAPRRG--TDVNRVTDRLINQLLTEMDGIEE 376

Query: 911  RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIR 970
               V VIAATNRPD +DPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV++ 
Sbjct: 377  NSGVVVIAATNRPDILDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRNVPLAEDVSLE 436

Query: 971  ELACLSEGCTGADISLICREAAISAIEENL---------------DASRITMQHLKTAIR 1015
            ELA  +EG TGADI  + REAA++A+   +                  ++TM+  + A++
Sbjct: 437  ELAKRTEGYTGADIEAVVREAALNAMRRAIAEGIIKPGTRASEIRQKVKVTMKDFEEALK 496

Query: 1016 HVQPS----EIHSYKELSAKFQR 1034
             V PS     I  YK++   F +
Sbjct: 497  KVGPSVSKETIEYYKKIEEMFSK 519



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 128/211 (60%), Gaps = 19/211 (9%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
           ++G+ P KG+LL+GPPGTGKT LA+  A +S  N   + GPEV+S+  GESE+ + E+F 
Sbjct: 271 AMGITPPKGILLYGPPGTGKTLLAKAVATESEANFIGIRGPEVLSKWVGESEKNIREIFR 330

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            A Q+AP VVFIDE+DAIAP R      ++ R++  LL  MDG+    GV+VIAATNRPD
Sbjct: 331 KARQAAPTVVFIDEIDAIAPRRGTDVNRVTDRLINQLLTEMDGIEENSGVVVIAATNRPD 390

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDS 615
            ++PAL RPGR DR I                 VP+P +  RLEI       +  +  D 
Sbjct: 391 ILDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRNVPLA-EDV 433

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            +E L+  T G+ GAD+ A+  EAAL  +RR
Sbjct: 434 SLEELAKRTEGYTGADIEAVVREAALNAMRR 464


>gi|299750239|ref|XP_001836624.2| ribosome biogenesis ATPase RIX7 [Coprinopsis cinerea okayama7#130]
 gi|298408810|gb|EAU85195.2| ribosome biogenesis ATPase RIX7 [Coprinopsis cinerea okayama7#130]
          Length = 799

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 247/654 (37%), Positives = 360/654 (55%), Gaps = 86/654 (13%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G++P +GVLLHGPPG GKT LA   A + GV    ++ P +VS   GESE+ L + F+ A
Sbjct: 188  GVQPPRGVLLHGPPGCGKTLLANAIAGELGVPFINISAPSIVSGMSGESEKTLRDTFEEA 247

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
             + AP ++FIDE+DAI P R+    E+ +R+VA  L  MD +   +TD   V+VI ATNR
Sbjct: 248  KRVAPCLLFIDEIDAITPKRESAQREMERRIVAQFLTCMDDMSWDKTDNKPVIVIGATNR 307

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++ ALRR GR D EI +               VP    R +IL  L S +    L+ 
Sbjct: 308  PDSLDAALRRAGRFDHEISM--------------GVPDDEARTKILKVLCSKLR---LEG 350

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
            + +++++A  T G+VGADLAAL   A ++ ++R  K         S GTL   +  ++  
Sbjct: 351  DFDFIALAKATPGYVGADLAALTGAAGIIAVKRIFK-------QLSDGTLLLPKEVTEMS 403

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
            L + D  +++  +     DSA P T     S L+S LP  G++        + ++++   
Sbjct: 404  LTNGD--QDVAMAEEPANDSAKPAT----FSGLASYLP-PGSIGHFLIAHPDPLTEA--- 453

Query: 734  MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
                 +   L +   DF+ A  +V+PS+ RE    VP V WEDVG     + +L  +V  
Sbjct: 454  -----QLAPLCITSEDFQLALKQVQPSSKREGFATVPDVTWEDVGALHATREELHMSVVE 508

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P +  E F  +G   P G+LM+GPPGC KTL+A+AVA+E+  NF++VKGPEL +K+VGES
Sbjct: 509  PIRRPELFSAVGIEAPCGVLMWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGES 568

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRV 912
            E+AVR +F++ARA++P +IFFDE+D L   R    D +S S  RV++ LL ELDGL  R 
Sbjct: 569  ERAVRQVFSRARASSPCVIFFDELDALVPRR---DDTLSESSARVVNTLLTELDGLDARK 625

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRE 971
             V VIAATNRPD IDPA++RPGR D+LLYV  P  T+R EI R  +RK+P    DV  ++
Sbjct: 626  GVYVIAATNRPDMIDPAMVRPGRLDKLLYVDLPTPTERAEIVRTMVRKLPLGRDDVMAQD 685

Query: 972  LA--------------CLSEGCTGADISLICREAAISAIEENLDASR------------I 1005
            +A              C  +G +GAD++ + REA + A+   L +              +
Sbjct: 686  IANDVRAAIEQLVKDRC--DGYSGADLASLVREAGVIALRRTLGSFSQLGDTPQAPNIVV 743

Query: 1006 TMQHLKTAIRHVQPS----EIHSYKELSAKFQ----RLVHSNAEADESGYQLRP 1051
            T+     A+  + PS    +   Y+ L +KF     R+     E  + G  + P
Sbjct: 744  TISDFIAALDKIGPSVSRAQRKKYESLRSKFAGLPVRMGKEEGEKRDEGEDIAP 797



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 26/223 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S++G+    GVL+ GPPG GKT LA+  A++S  N  +V GPE++++  GESE+A+ +V
Sbjct: 516 FSAVGIEAPCGVLMWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQV 575

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A  S+P V+F DELDA+ P R D   E S R+V TLL  +DG+    GV VIAATNR
Sbjct: 576 FSRARASSPCVIFFDELDALVPRRDDTLSESSARVVNTLLTELDGLDARKGVYVIAATNR 635

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+PA+ RPGRLD+ + +D+              P+P +R EI+  ++  +     D 
Sbjct: 636 PDMIDPAMVRPGRLDKLLYVDL--------------PTPTERAEIVRTMVRKLPLGRDDV 681

Query: 616 EVEYLSMATH------------GFVGADLAALCNEAALVCLRR 646
             + ++                G+ GADLA+L  EA ++ LRR
Sbjct: 682 MAQDIANDVRAAIEQLVKDRCDGYSGADLASLVREAGVIALRR 724



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 6/232 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG      +++E V  P  H E +   G +PP G+L+ GPPGC KTL+A A+
Sbjct: 153 PATRLSDLGGVEGCIEKMLELVAMPLCHPEVYLHTGVQPPRGVLLHGPPGCGKTLLANAI 212

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ F+ +  P + S   GESEK +R  F +A+  AP ++F DEID +   R  ES 
Sbjct: 213 AGELGVPFINISAPSIVSGMSGESEKTLRDTFEEAKRVAPCLLFIDEIDAITPKR--ESA 270

Query: 890 GVSVSDRVMSQLLVELDGLH----QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++Q L  +D +         V VI ATNRPD +D AL R GRFD  + +G P
Sbjct: 271 QREMERRIVAQFLTCMDDMSWDKTDNKPVIVIGATNRPDSLDAALRRAGRFDHEISMGVP 330

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           ++  R +I ++   K+    D +   LA  + G  GAD++ +   A I A++
Sbjct: 331 DDEARTKILKVLCSKLRLEGDFDFIALAKATPGYVGADLAALTGAAGIIAVK 382


>gi|426239523|ref|XP_004013670.1| PREDICTED: nuclear valosin-containing protein-like isoform 2 [Ovis
            aries]
          Length = 772

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/600 (40%), Positives = 334/600 (55%), Gaps = 64/600 (10%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V   EVVS   GESEQ L E+F+ 
Sbjct: 201  LGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQ 260

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 261  AVSSAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 320

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +   L ++
Sbjct: 321  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR--LPET 364

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
                +L+  T GFVGADL ALC EAA+  + R                L E +G    + 
Sbjct: 365  FHFRHLAHLTPGFVGADLMALCREAAMCAVNR---------------VLMELQGQKKGL- 408

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
                    +    ++    A P   D      + + P   T  E+      G+  +   +
Sbjct: 409  -------GLNPHKKNPEIEALPSEGDQEKR--TGAEPTSKTQEELQRLL--GLLRNQDPL 457

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
               E+   L +EL DF  A   V+PSA RE    VP V W D+G   +++ +L  A+  P
Sbjct: 458  -SEEQLKGLCIELNDFLVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAILAP 516

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
             ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE
Sbjct: 517  VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 576

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNV 914
            +AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V
Sbjct: 577  RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASV--RVVNQLLTEMDGLETRQQV 634

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRE 971
             ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+  
Sbjct: 635  FIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEA 694

Query: 972  LAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQPS 1020
            +A  L   C TGAD+S + REA+I A+++ +            +I+ +H + A + V+ S
Sbjct: 695  IAGDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKISQKHFEEAFKKVKSS 754



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/257 (40%), Positives = 148/257 (57%), Gaps = 10/257 (3%)

Query: 745 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW--PQKHQEAFK 802
           L+ VD E   +  + +  + + L++  VK+EDVGG     T L E  +     +H E ++
Sbjct: 143 LQEVDGEIEAVLQKKAKAKGLELQISSVKFEDVGGN---DTTLKEVCKMLIHMRHPEVYR 199

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +G  PP G+L+ GPPGC KTL+A A+A E  L  L V   E+ S   GESE+ +R LF 
Sbjct: 200 HLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFE 259

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAA 919
           +A ++AP I+F DEID +   R  E     +  R+++QLL  +D L+       V VI A
Sbjct: 260 QAVSSAPCILFIDEIDAITPKR--EIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGA 317

Query: 920 TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 979
           TNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      + R LA L+ G 
Sbjct: 318 TNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPETFHFRHLAHLTPGF 377

Query: 980 TGADISLICREAAISAI 996
            GAD+  +CREAA+ A+
Sbjct: 378 VGADLMALCREAAMCAV 394



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 142/266 (53%), Gaps = 21/266 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 481 PSAKREGFATVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 538

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 539 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 598

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R       S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 599 VDALCPRRSARETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 658

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 659 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 704

Query: 628 VGADLAALCNEAALVCLRRYSKIQTS 653
            GADL+AL  EA++  L++    Q S
Sbjct: 705 TGADLSALVREASICALKQEMARQKS 730


>gi|343427180|emb|CBQ70708.1| related to RIX7-AAA-type ATPase required for biogenesis and nuclear
            export of 60S ribosomal subunits [Sporisorium reilianum
            SRZ2]
          Length = 878

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 243/644 (37%), Positives = 346/644 (53%), Gaps = 75/644 (11%)

Query: 413  LGGLSKEY-AILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            LGG+S     IL+ I +        +  G++P +GVLLHGPPG GKT LA   A + GV 
Sbjct: 162  LGGISHAIEKILELIAMPLCHPEIYAHTGVKPPRGVLLHGPPGCGKTMLAGAVAGELGVP 221

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +++ P VVS   GESE+ + + FD A+  AP ++FIDE+DAI P R+    E+ +R+V
Sbjct: 222  FLSISAPSVVSGTSGESEKTIRDTFDEAASIAPCILFIDEIDAITPKRETAQREMERRIV 281

Query: 532  ATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            A LL  +D +   +TDG  V++I ATNRPDS++PALRR GR D EI +            
Sbjct: 282  AQLLTSLDDLSWEKTDGKPVMIIGATNRPDSLDPALRRAGRFDHEIAM------------ 329

Query: 588  PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
               VP    R +IL  L   +  S  D +   L+ AT G+VGADL AL + A ++ ++R 
Sbjct: 330  --GVPDEDGREQILRVLAQKLRLSG-DFDFRALAKATPGYVGADLTALTSAAGIIAVKRI 386

Query: 648  SKIQTSSDVL---------------HSTGTLFEFEGHSDTMLQDSDCSRNI--------- 683
             +  + +D L               H+           D  + DS+ +            
Sbjct: 387  FQQLSETDSLPASLSAERISQAIGLHTPDVQQHATASGDVEMDDSEVTAAASVSQAKSDA 446

Query: 684  -------TESSRDC----LDSASPCT-----SDLPTSLLSSSLPLRGTVSEIADNFHNGV 727
                   TES  D       +A+P T     + +P    ++   +R + +   +     +
Sbjct: 447  TQATPAATESGVDTPGVSTGAATPVTVAGDGAQMPVPAPAAPSNVRPSAT-FFEALPEHI 505

Query: 728  SDSSGGMFMSEKG--------CALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG 779
             DSS   F+              L +   DF  A   V+PS+ RE    VP V W DVG 
Sbjct: 506  RDSSIASFLKNHPSPLTDAQLAPLAITNADFLVALPSVQPSSKREGFATVPDVSWADVGA 565

Query: 780  QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLA 839
                + +L  A+  P K  E F+ +G    +G+L++GPPGC KTL+A+AVA+E+  NF++
Sbjct: 566  LHSTRDELSMAIVEPIKRPELFRSVGVSASSGVLLWGPPGCGKTLLAKAVANESHANFIS 625

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS-VSDRVM 898
            VKGPEL +K+VGESEKAVR +FA+AR ++P +IFFDE+D L   R    D +S  S RV+
Sbjct: 626  VKGPELLNKYVGESEKAVRQVFARARTSSPCVIFFDELDALVPRR---DDSLSESSSRVV 682

Query: 899  SQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            + LL ELDGL  RV   VIAATNRPD IDPA+ RPGR D+LLYV  P   +R EI +   
Sbjct: 683  NTLLTELDGLESRVQTYVIAATNRPDMIDPAMCRPGRLDKLLYVDLPKPDERLEILKTIT 742

Query: 959  RKIPCSSDVNIRELACLS--EGCTGADISLICREAAISAIEENL 1000
             K P S DV+++ +A     EG +GAD++ + REAA+ A+ E +
Sbjct: 743  SKTPLSDDVDLQTIAHDDKLEGFSGADLAALVREAAVLALRETI 786



 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 134/232 (57%), Gaps = 6/232 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG      +++E +  P  H E +   G +PP G+L+ GPPGC KT++A AV
Sbjct: 155 PATRLVDLGGISHAIEKILELIAMPLCHPEIYAHTGVKPPRGVLLHGPPGCGKTMLAGAV 214

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ FL++  P + S   GESEK +R  F +A + AP I+F DEID +   R  E+ 
Sbjct: 215 AGELGVPFLSISAPSVVSGTSGESEKTIRDTFDEAASIAPCILFIDEIDAITPKR--ETA 272

Query: 890 GVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++QLL  LD L         V +I ATNRPD +DPAL R GRFD  + +G P
Sbjct: 273 QREMERRIVAQLLTSLDDLSWEKTDGKPVMIIGATNRPDSLDPALRRAGRFDHEIAMGVP 332

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           +E  RE+I R+  +K+  S D + R LA  + G  GAD++ +   A I A++
Sbjct: 333 DEDGREQILRVLAQKLRLSGDFDFRALAKATPGYVGADLTALTSAAGIIAVK 384


>gi|302659175|ref|XP_003021281.1| hypothetical protein TRV_04594 [Trichophyton verrucosum HKI 0517]
 gi|291185172|gb|EFE40663.1| hypothetical protein TRV_04594 [Trichophyton verrucosum HKI 0517]
          Length = 747

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/632 (37%), Positives = 352/632 (55%), Gaps = 79/632 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGG+      L+++I+    +  + S+  ++P +GVLLHGPPG GKT +A   A + 
Sbjct: 180  LADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAAEL 239

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV    ++ P ++S   GESE+AL + F+ A + AP ++F+DE+DAI P R+    E+ +
Sbjct: 240  GVPFIAISAPSIISGMSGESEKALRDHFEEAKKVAPCLIFMDEIDAITPKRESAQREMEK 299

Query: 529  RMVATLLNLMD--GVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  MD   + +TDG  V+V+AATNRPDS++PALRR GR D+EI +         
Sbjct: 300  RIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINL--------- 350

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VPS   R +IL AL   M  +  D + ++L+  T GFVGADL  L + AA   +
Sbjct: 351  -----TVPSEPVREQILRALTREMNLAD-DLDFKFLAKGTAGFVGADLNDLVSTAATAAI 404

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
            +RY  +  S+     TG   + E      L  +  S+ + E                   
Sbjct: 405  KRYLDLLKSA-----TGEEMDIE-----ELPPAGVSKKVME------------------- 435

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
                   LR  +    +  H    ++   +++S +         DF  A  K++PS+ RE
Sbjct: 436  -------LRQLIKRARETPH----EADPQIYVSNE---------DFLTALPKIQPSSKRE 475

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
                +P   W D+G    V+ +L+ A+  P ++ E + R+G   PTG+L++GPPGC KTL
Sbjct: 476  GFATIPATTWADIGSLGSVREELVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTL 535

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F++AR++ P +IFFDE+D L   R
Sbjct: 536  LAKAVANESRANFISIKGPELLNKYVGESERAVRQVFSRARSSVPCVIFFDELDALVPRR 595

Query: 885  GKESDGVS-VSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
                D +S  S RV++ LL ELDGL   R  + VIAATNRPD IDPA+LRPGR + LL+V
Sbjct: 596  ---DDTMSEASARVVNTLLTELDGLGSSRNGIYVIAATNRPDIIDPAMLRPGRLETLLFV 652

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              P   +R E+ R  +RK+P      + ELA   EG +GAD+  + R A  SAI+     
Sbjct: 653  NLPGRDERAEVLRTLIRKLPIEMTDELVELARSCEGFSGADLGSLLRRAGYSAIKRR--- 709

Query: 1003 SRITMQHLKTAIRHVQPS--EIHSYKELSAKF 1032
              I  +    A R ++PS  ++  Y+ L   +
Sbjct: 710  DTIKFEDFVAAKREIRPSVTDMKKYESLKKDW 741



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 137/234 (58%), Gaps = 6/234 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V   D+GG  +V  QL E +  P    + F     +PP G+L+ GPPGC KT++A A A+
Sbjct: 178  VSLADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAA 237

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G+ F+A+  P + S   GESEKA+R  F +A+  AP +IF DEID +   R  ES   
Sbjct: 238  ELGVPFIAISAPSIISGMSGESEKALRDHFEEAKKVAPCLIFMDEIDAITPKR--ESAQR 295

Query: 892  SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++QLL  +D L         V V+AATNRPD +DPAL R GRFD+ + +  P+E
Sbjct: 296  EMEKRIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINLTVPSE 355

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              RE+I R   R++  + D++ + LA  + G  GAD++ +   AA +AI+  LD
Sbjct: 356  PVREQILRALTREMNLADDLDFKFLAKGTAGFVGADLNDLVSTAATAAIKRYLD 409



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 159/293 (54%), Gaps = 29/293 (9%)

Query: 361 HESNAFV-INHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKE 419
           HE++  + +++E  +   P +   SK  REG        F  + AT   DI  LG + +E
Sbjct: 448 HEADPQIYVSNEDFLTALPKIQPSSK--REG--------FATIPATTWADIGSLGSVREE 497

Query: 420 YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPE 479
             ++  I+         S +G+    GVLL GPPG GKT LA+  A++S  N  ++ GPE
Sbjct: 498 --LVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTLLAKAVANESRANFISIKGPE 555

Query: 480 VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD 539
           ++++  GESE+A+ +VF  A  S P V+F DELDA+ P R D   E S R+V TLL  +D
Sbjct: 556 LLNKYVGESERAVRQVFSRARSSVPCVIFFDELDALVPRRDDTMSEASARVVNTLLTELD 615

Query: 540 GVCRT-DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL 598
           G+  + +G+ VIAATNRPD I+PA+ RPGRL+       + LF         +P   +R 
Sbjct: 616 GLGSSRNGIYVIAATNRPDIIDPAMLRPGRLE-------TLLF-------VNLPGRDERA 661

Query: 599 EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           E+L  L+  +   + D  VE L+ +  GF GADL +L   A    ++R   I+
Sbjct: 662 EVLRTLIRKLPIEMTDELVE-LARSCEGFSGADLGSLLRRAGYSAIKRRDTIK 713


>gi|417404977|gb|JAA49219.1| Putative nuclear aaa atpase vcp subfamily protein [Desmodus rotundus]
          Length = 856

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/601 (39%), Positives = 332/601 (55%), Gaps = 74/601 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA+  A +  + +  V   E+VS   GESEQ L  +F+ 
Sbjct: 293  LGVIPPRGVLLHGPPGCGKTLLAQAIAGELDLPILKVAATEIVSGVSGESEQKLRGLFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 353  AVSNAPCILFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNSVAATARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +      S
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLRLPGT-S 457

Query: 616  EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
            +  +L+  T GFVGADL ALC EAA+  + R   +    D   S     E +G      Q
Sbjct: 458  DFRHLAHLTPGFVGADLMALCREAAVCAVNRV--LMQLQDAPRSDP---ERQGQPLEGGQ 512

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
            +       T +++D L S           LL +  PL                       
Sbjct: 513  EESTGTEPTHNTQDELQSL--------LRLLRNQDPLS---------------------- 542

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
              E+   L +EL DF  A   V+PSA RE  + VP V W D+G   +V+ +L  A+  P 
Sbjct: 543  -EEQLQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDVRDELTMAILAPV 601

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            ++ E F+ +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE+
Sbjct: 602  RNPEQFQALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESER 661

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V 
Sbjct: 662  AVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLETRQQVF 719

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIREL 972
            ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DV +  +
Sbjct: 720  ILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVLLEAI 779

Query: 973  A----CLSEGCTGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQP 1019
            A    C  EG +GAD+S + REA++ A+ + +            +I+ +H + A R V+ 
Sbjct: 780  AGDHRC--EGYSGADLSALVREASLCALRQEMARQKSGNERGELKISQKHFEEAFRKVKS 837

Query: 1020 S 1020
            S
Sbjct: 838  S 838



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 174/319 (54%), Gaps = 25/319 (7%)

Query: 700  DLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG---GMFMSEKGCALK--LELVDFEKAR 754
            DLP    ++  P    +SEI D+  + + +S+    G   ++ G   K  L+ VD E   
Sbjct: 189  DLPAEKSNNKKP----ISEIEDSKESSLLESNKKRKGRLKNKGGKRKKEDLQEVDGEIEA 244

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW--PQKHQEAFKRIGTRPPTGI 812
            +  R +    +  ++  VK+EDVGG     T L E  +     +H E ++ +G  PP G+
Sbjct: 245  VLQRKANTIGLEFQISNVKFEDVGGN---DTTLKEVCKMLIHMRHPEVYQHLGVIPPRGV 301

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L+ GPPGC KTL+A+A+A E  L  L V   E+ S   GESE+ +R LF +A +NAP I+
Sbjct: 302  LLHGPPGCGKTLLAQAIAGELDLPILKVAATEIVSGVSGESEQKLRGLFEQAVSNAPCIL 361

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPA 929
            F DEID +   R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPA
Sbjct: 362  FIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNSVAATARVLVIGATNRPDSLDPA 419

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            L R GRFDR + +G P+E  RE I +   RK+      + R LA L+ G  GAD+  +CR
Sbjct: 420  LRRAGRFDREICLGIPDEASRERILQTLCRKLRLPGTSDFRHLAHLTPGFVGADLMALCR 479

Query: 990  EAAISAIEENLDASRITMQ 1008
            EAA+ A+      +R+ MQ
Sbjct: 480  EAAVCAV------NRVLMQ 492



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/224 (41%), Positives = 129/224 (57%), Gaps = 18/224 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             +LGL    GVLL GPPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +V
Sbjct: 607 FQALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQV 666

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A  SAP V+F DE+DA+ P R D     S R+V  LL  MDG+     V ++AATNR
Sbjct: 667 FQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNR 726

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+PA+ RPGRLD+ + +               +P PA RL IL  +        LD+
Sbjct: 727 PDIIDPAILRPGRLDKTLFV--------------GLPPPADRLAILKTITKNGTKPPLDA 772

Query: 616 EVEYLSMA----THGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
           +V   ++A      G+ GADL+AL  EA+L  LR+    Q S +
Sbjct: 773 DVLLEAIAGDHRCEGYSGADLSALVREASLCALRQEMARQKSGN 816


>gi|315039481|ref|XP_003169116.1| ribosome biogenesis ATPase RIX7 [Arthroderma gypseum CBS 118893]
 gi|311337537|gb|EFQ96739.1| ribosome biogenesis ATPase RIX7 [Arthroderma gypseum CBS 118893]
          Length = 743

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/632 (36%), Positives = 351/632 (55%), Gaps = 79/632 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGG+      L+++I+    +  + S+  ++P +GVLLHGPPG GKT +A   A + 
Sbjct: 176  LADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAAEL 235

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV    ++ P ++S   GESE+AL + F+ A + AP ++F+DE+DAI P R+    E+ +
Sbjct: 236  GVPFIAISAPSIISGMSGESEKALRDHFEEARRVAPCLIFMDEIDAITPKRESAQREMEK 295

Query: 529  RMVATLLNLMD--GVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  MD   + +TDG  V+V+AATNRPDS++PALRR GR D+EI +         
Sbjct: 296  RIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINL--------- 346

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VPS   R +IL AL   M  +  D + ++L+  T GFVGADL  L + AA   +
Sbjct: 347  -----TVPSEPVREQILRALTREMNLAD-DLDFKFLAKGTAGFVGADLNDLVSTAATAAI 400

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
            +RY  +  S+     TG   + E                                + P  
Sbjct: 401  KRYLDLLKST-----TGEEMDIE-------------------------------EEPPAG 424

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
            +    + LR  +    +  H    ++   +++S +         DF  A  K++PS+ RE
Sbjct: 425  VSKKVMELRQLIKRARETPH----EADPQIYVSNQ---------DFLTALPKIQPSSKRE 471

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
                +P   W D+G    V+ +L+ A+  P ++ E + R+G   PTG+L++GPPGC KTL
Sbjct: 472  GFATIPATTWADIGSLGSVREELVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTL 531

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F++AR++ P +IFFDE+D L   R
Sbjct: 532  LAKAVANESRANFISIKGPELLNKYVGESERAVRQVFSRARSSVPCVIFFDELDALVPRR 591

Query: 885  GKESDGVS-VSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
                D +S  S RV++ LL ELDGL   R  + VIAATNRPD IDPA+LRPGR + LL+V
Sbjct: 592  ---DDTMSEASARVVNTLLTELDGLGSSRNGIYVIAATNRPDIIDPAMLRPGRLETLLFV 648

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              P   +R E+ R  +RK+P      + ELA   EG +GAD+  + R A  SAI+     
Sbjct: 649  NLPGRDERAEVLRTLIRKLPIEMTDELVELARSCEGFSGADLGSLLRRAGYSAIKRR--- 705

Query: 1003 SRITMQHLKTAIRHVQPS--EIHSYKELSAKF 1032
              I ++    A + ++PS  ++  Y+ L   +
Sbjct: 706  DTIKLEDFVAAKKEIRPSVTDMKKYERLKKDW 737



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/281 (37%), Positives = 153/281 (54%), Gaps = 8/281 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V   D+GG  +V  QL E +  P    + F     +PP G+L+ GPPGC KT++A A A+
Sbjct: 174  VSLADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAA 233

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G+ F+A+  P + S   GESEKA+R  F +AR  AP +IF DEID +   R  ES   
Sbjct: 234  ELGVPFIAISAPSIISGMSGESEKALRDHFEEARRVAPCLIFMDEIDAITPKR--ESAQR 291

Query: 892  SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++QLL  +D L         V V+AATNRPD +DPAL R GRFD+ + +  P+E
Sbjct: 292  EMEKRIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINLTVPSE 351

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITM 1007
              RE+I R   R++  + D++ + LA  + G  GAD++ +   AA +AI+  LD  + T 
Sbjct: 352  PVREQILRALTREMNLADDLDFKFLAKGTAGFVGADLNDLVSTAATAAIKRYLDLLKSTT 411

Query: 1008 QHLKTAIRHVQPSEI-HSYKELSAKFQRLVHSNAEADESGY 1047
               +  I    P+ +     EL    +R   +  EAD   Y
Sbjct: 412  GE-EMDIEEEPPAGVSKKVMELRQLIKRARETPHEADPQIY 451



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 159/293 (54%), Gaps = 29/293 (9%)

Query: 361 HESNAFV-INHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKE 419
           HE++  + ++++  +   P +   SK  REG        F  + AT   DI  LG + +E
Sbjct: 444 HEADPQIYVSNQDFLTALPKIQPSSK--REG--------FATIPATTWADIGSLGSVREE 493

Query: 420 YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPE 479
             ++  I+         S +G+    GVLL GPPG GKT LA+  A++S  N  ++ GPE
Sbjct: 494 --LVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTLLAKAVANESRANFISIKGPE 551

Query: 480 VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD 539
           ++++  GESE+A+ +VF  A  S P V+F DELDA+ P R D   E S R+V TLL  +D
Sbjct: 552 LLNKYVGESERAVRQVFSRARSSVPCVIFFDELDALVPRRDDTMSEASARVVNTLLTELD 611

Query: 540 GVCRT-DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL 598
           G+  + +G+ VIAATNRPD I+PA+ RPGRL+       + LF  L       P   +R 
Sbjct: 612 GLGSSRNGIYVIAATNRPDIIDPAMLRPGRLE-------TLLFVNL-------PGRDERA 657

Query: 599 EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           E+L  L+  +   + D  VE L+ +  GF GADL +L   A    ++R   I+
Sbjct: 658 EVLRTLIRKLPIEMTDELVE-LARSCEGFSGADLGSLLRRAGYSAIKRRDTIK 709


>gi|327302246|ref|XP_003235815.1| AAA family ATPase [Trichophyton rubrum CBS 118892]
 gi|326461157|gb|EGD86610.1| AAA family ATPase [Trichophyton rubrum CBS 118892]
          Length = 743

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/632 (37%), Positives = 351/632 (55%), Gaps = 79/632 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGG+      L+++I+    +  + S+  ++P +GVLLHGPPG GKT +A   A + 
Sbjct: 176  LADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAAEL 235

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV    ++ P ++S   GESE+AL + F+ A + AP ++F+DE+DAI P R+    E+ +
Sbjct: 236  GVPFIAISAPSIISGMSGESEKALRDYFEEAKKVAPCLIFMDEIDAITPKRESAQREMEK 295

Query: 529  RMVATLLNLMD--GVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  MD   + +TDG  V+V+AATNRPDS++PALRR GR D+EI +         
Sbjct: 296  RIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINL--------- 346

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VPS   R +IL AL   M  +  D + ++L+  T GFVGADL  L + AA   +
Sbjct: 347  -----TVPSEPVREQILRALTREMNLAD-DLDFKFLAKGTAGFVGADLNDLVSTAATAAI 400

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
            +RY  +  S+     TG   + E      L     S+ + E                   
Sbjct: 401  KRYLDLLKSA-----TGEEMDIE-----ELPPVGVSKKVME------------------- 431

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
                   LR  +    +  H    ++   +++S +         DF  A  K++PS+ RE
Sbjct: 432  -------LRQLIKRARETPH----EADPQIYVSNE---------DFLTALPKIQPSSKRE 471

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
                +P   W D+G    V+ +L+ A+  P ++ E + R+G   PTG+L++GPPGC KTL
Sbjct: 472  GFATIPATTWADIGSLGSVREELVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTL 531

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F++AR++ P +IFFDE+D L   R
Sbjct: 532  LAKAVANESRANFISIKGPELLNKYVGESERAVRQVFSRARSSIPCVIFFDELDALVPRR 591

Query: 885  GKESDGVS-VSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
                D +S  S RV++ LL ELDGL   R  + VIAATNRPD IDPA+LRPGR + LL+V
Sbjct: 592  ---DDTMSEASARVVNTLLTELDGLGSSRNGIYVIAATNRPDIIDPAMLRPGRLETLLFV 648

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              P   +R E+ R  +RK+P      + ELA   EG +GAD+  + R A  SAI+     
Sbjct: 649  NLPGRDERAEVLRTLIRKLPIEMTDELAELARSCEGFSGADLGSLLRRAGYSAIKRR--- 705

Query: 1003 SRITMQHLKTAIRHVQPS--EIHSYKELSAKF 1032
              I  +    A R ++PS  ++  Y+ L   +
Sbjct: 706  DTIKFEDFVAAKREIRPSVTDMKKYESLKKHW 737



 Score =  166 bits (420), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 137/234 (58%), Gaps = 6/234 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V   D+GG  +V  QL E +  P    + F     +PP G+L+ GPPGC KT++A A A+
Sbjct: 174  VSLADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAA 233

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G+ F+A+  P + S   GESEKA+R  F +A+  AP +IF DEID +   R  ES   
Sbjct: 234  ELGVPFIAISAPSIISGMSGESEKALRDYFEEAKKVAPCLIFMDEIDAITPKR--ESAQR 291

Query: 892  SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++QLL  +D L         V V+AATNRPD +DPAL R GRFD+ + +  P+E
Sbjct: 292  EMEKRIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINLTVPSE 351

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              RE+I R   R++  + D++ + LA  + G  GAD++ +   AA +AI+  LD
Sbjct: 352  PVREQILRALTREMNLADDLDFKFLAKGTAGFVGADLNDLVSTAATAAIKRYLD 405



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/293 (36%), Positives = 159/293 (54%), Gaps = 29/293 (9%)

Query: 361 HESNAFV-INHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKE 419
           HE++  + +++E  +   P +   SK  REG        F  + AT   DI  LG + +E
Sbjct: 444 HEADPQIYVSNEDFLTALPKIQPSSK--REG--------FATIPATTWADIGSLGSVREE 493

Query: 420 YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPE 479
             ++  I+         S +G+    GVLL GPPG GKT LA+  A++S  N  ++ GPE
Sbjct: 494 --LVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTLLAKAVANESRANFISIKGPE 551

Query: 480 VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD 539
           ++++  GESE+A+ +VF  A  S P V+F DELDA+ P R D   E S R+V TLL  +D
Sbjct: 552 LLNKYVGESERAVRQVFSRARSSIPCVIFFDELDALVPRRDDTMSEASARVVNTLLTELD 611

Query: 540 GVCRT-DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL 598
           G+  + +G+ VIAATNRPD I+PA+ RPGRL+       + LF         +P   +R 
Sbjct: 612 GLGSSRNGIYVIAATNRPDIIDPAMLRPGRLE-------TLLF-------VNLPGRDERA 657

Query: 599 EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           E+L  L+  +   + D E+  L+ +  GF GADL +L   A    ++R   I+
Sbjct: 658 EVLRTLIRKLPIEMTD-ELAELARSCEGFSGADLGSLLRRAGYSAIKRRDTIK 709


>gi|194227313|ref|XP_001489788.2| PREDICTED: nuclear VCP-like [Equus caballus]
          Length = 1175

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 238/607 (39%), Positives = 329/607 (54%), Gaps = 86/607 (14%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V   EVVS   GESEQ L E+F+ 
Sbjct: 293  LGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQ 352

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV---CRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD +     T  VLVI ATNR
Sbjct: 353  AVSNAPCILFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNAAATARVLVIGATNR 412

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +   L D+
Sbjct: 413  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR--LPDT 456

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRY-------SKIQTSSDVLHSTGTLFEFE 667
                +L+  T GFVGADL ALC EAA+  + R         K    ++ L S G   E  
Sbjct: 457  FHFRHLAHLTPGFVGADLMALCREAAMCAVHRVLMKLQEQQKKDPETEGLPSEGGREERA 516

Query: 668  GHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGV 727
            G   T     +  R +                     LL +  PL               
Sbjct: 517  GTEPTSETQDELQRLL--------------------GLLRNQDPL--------------- 541

Query: 728  SDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQL 787
                      E+   L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L
Sbjct: 542  --------SEEQLQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREEL 593

Query: 788  MEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFS 847
              A+  P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL +
Sbjct: 594  TMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLN 653

Query: 848  KWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDG 907
             +VGESE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DG
Sbjct: 654  MYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDG 711

Query: 908  LHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCS 964
            L  R  V ++AATNRPD +DPA+LRPGR D+ L+VG P   DR  I +   +   K P  
Sbjct: 712  LETRQQVFIMAATNRPDILDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLD 771

Query: 965  SDVNIRELA--CLSEGCTGADISLICREAAISAIEENLDASR---------ITMQHLKTA 1013
            +DVN+ ++A  C  +  +GAD+S + REA++ A+ + +   R         I  +H + A
Sbjct: 772  TDVNLEQIARDCRCDRYSGADLSALVREASLCALRQEMARQRSGSEKGELKIGQKHFEEA 831

Query: 1014 IRHVQPS 1020
               V+ S
Sbjct: 832  FEKVKSS 838



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/297 (38%), Positives = 162/297 (54%), Gaps = 19/297 (6%)

Query: 716  VSEIADNFHNGV--SDSSGGMFMSEKGCALK---LELVDFEKARMKVRPSAMREVILEVP 770
            +SEI D+  + +  S+      +  KG   K   L+  D E A +  + +  R + L++ 
Sbjct: 201  ISEIEDSKDSSLLESNEQRKGRLKSKGSKRKKEDLQEADGEIAAVLEKRAKARGLELQIS 260

Query: 771  KVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
             V +EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPPGC KTL+A
Sbjct: 261  SVTFEDVGGNDTTLKEVCKMLIH-----MRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLA 315

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
             A+A E  L  L V   E+ S   GESE+ +R LF +A +NAP I+F DEID +   R  
Sbjct: 316  HAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCILFIDEIDAITPKR-- 373

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR + +G
Sbjct: 374  EVASKDMERRIVAQLLTCMDDLNNAAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 433

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             P+E  RE I +   RK+      + R LA L+ G  GAD+  +CREAA+ A+   L
Sbjct: 434  IPDEASRERILQTLCRKLRLPDTFHFRHLAHLTPGFVGADLMALCREAAMCAVHRVL 490



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/266 (38%), Positives = 142/266 (53%), Gaps = 21/266 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD ++PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDILDPAILRPGRLDK 742

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V    +A       +
Sbjct: 743 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDTDVNLEQIARDCRCDRY 788

Query: 628 VGADLAALCNEAALVCLRRYSKIQTS 653
            GADL+AL  EA+L  LR+    Q S
Sbjct: 789 SGADLSALVREASLCALRQEMARQRS 814


>gi|350401068|ref|XP_003486041.1| PREDICTED: nuclear valosin-containing protein-like [Bombus impatiens]
          Length = 933

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 245/659 (37%), Positives = 358/659 (54%), Gaps = 66/659 (10%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
             + +GG  K    +  ++           LG+ P +G LLHGPPG GKT LA   A +  
Sbjct: 276  FADIGGNDKVLKTVCKLLAHMKHPEIFKQLGISPPRGFLLHGPPGCGKTLLAYAIAGELD 335

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            + L  V  PE+V+   GESE  + E+F+ A   AP V+F+DE+DA+AP R     E+ +R
Sbjct: 336  IPLLKVAAPELVAGVSGESEARIRELFEQALAIAPCVIFLDEIDAVAPHRATAQREMERR 395

Query: 530  MVATLLNLMDGVCRTDG---VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +VA LL+ +D +   +    VLV+ ATNRPDS++PALRR GR D E+ +           
Sbjct: 396  IVAQLLSCLDELSLKENGTRVLVLGATNRPDSLDPALRRAGRFDHEVCL----------- 444

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCL 644
                +P    R +IL       E   L   V   ++A  T GFVGADL AL  EAA+  +
Sbjct: 445  ---GIPDRDARAKILAV---HTEKVALAPNVSLSTIASLTPGFVGADLVALIREAAMAAM 498

Query: 645  RRY------------SKIQTSSDVLHSTGTLFEFEGH--SDTMLQDSDCSRNITESSRDC 690
             R             S+I   S V+      FE   +   +  ++ S  ++N   S  + 
Sbjct: 499  DRILEDLKSVPDNKSSEIPEDSTVIEKKTESFENSSNLVEEVAIEPSTSNQN-NVSKLNK 557

Query: 691  LDSASPCTSDLPTSLL---SSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLEL 747
              +A    + L   ++   S S  L G ++ + ++              SE+   L +E 
Sbjct: 558  TSNAENHQATLEMDVIQENSKSPDLTGLLTWLRND----------PPLPSERLSNLYIEH 607

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
             DFE A   ++PSA RE    VP V W+DVG  R+++ +L  A+  P +H E F  +G  
Sbjct: 608  DDFETAVHIIQPSAKREGFATVPDVTWDDVGSLRDIREELQMAILAPIRHSEHFIALGLT 667

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
             PTG+L+ GPPGC KTL+A+A+A+EAG+NF++VKGPEL + +VGESEKAVR  F +AR +
Sbjct: 668  APTGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELLNMYVGESEKAVRQCFIRARNS 727

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            AP +IFFDE+D L   R  E D  S + RV++Q+L E+DG+  R  V ++AA+NRPD ID
Sbjct: 728  APCVIFFDELDALCP-RRSEGDN-SATSRVVNQMLTEMDGVEGRQGVFLMAASNRPDIID 785

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELACLS--EGCTGA 982
            PA+LRPGR D++LYV  P   DR +I R   +   K   ++DVN+ E+   S  +G TGA
Sbjct: 786  PAVLRPGRLDKILYVDLPTSADRVDILRALTKNATKPKLAADVNLEEIGYNSKCDGYTGA 845

Query: 983  DISLICREAAISAIEENLDAS-----RITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            D++ + REA I A+ E +D        I+M+H   A   ++PS    +I  Y++L   +
Sbjct: 846  DLAALIREAGIEALRELMDMHYSGQPEISMRHFVVAFDKIRPSVQEKDIKHYEKLKKLY 904


>gi|58259205|ref|XP_567015.1| helicase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134107345|ref|XP_777557.1| hypothetical protein CNBA6790 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50260251|gb|EAL22910.1| hypothetical protein CNBA6790 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|57223152|gb|AAW41196.1| helicase, putative [Cryptococcus neoformans var. neoformans JEC21]
          Length = 756

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 248/679 (36%), Positives = 355/679 (52%), Gaps = 90/679 (13%)

Query: 409  DISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
            D+  LGGL  +   L +I   +     +    G+   KGVLLHG PG GKT L R  A +
Sbjct: 77   DLGALGGLQPQITQLLEIAALALFHPEIYLHTGVPRPKGVLLHGVPGGGKTQLVRCLAGE 136

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
              +   +V+ P +VS   GESE+ L + FD A + AP ++F+DE+DAI P R++   E+ 
Sbjct: 137  LKLPFISVSAPSIVSGMSGESEKTLRDTFDEAKKVAPCILFLDEVDAITPKRENAQREME 196

Query: 528  QRMVATLLNLMDGVCRTD-GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +R+VA LL  MD +  ++  V++I ATNRPDS++PALRR GR D EIE+           
Sbjct: 197  RRIVAQLLTCMDDLAASEEPVIIIGATNRPDSLDPALRRAGRFDHEIEM----------- 245

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                VPS   R +IL  L S +  S  D +   L+ AT G++GADL AL  EA ++ ++R
Sbjct: 246  ---GVPSQEGREQILKVLCSKLRLSG-DVDFRQLAKATPGYIGADLTALTTEAGIIAVKR 301

Query: 647  YSK----IQTSSDVLHST--GTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSD 700
                   I + +D  H +  GT+ E +G     +   D          D  ++  P    
Sbjct: 302  IFDSGFGIGSGTDTPHDSEQGTVPEPDGAGMEAMAIDDRYTPFANLPDDVKET--PIAKF 359

Query: 701  L---PTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKV 757
            L   PT+L S  L                                + L   DF  A   V
Sbjct: 360  LMSHPTALTSDQL------------------------------STISLTPADFLAALKIV 389

Query: 758  RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
            +PSA RE    +P V W D+G   + + +L  A+  P +H E F  +G   P+G+L++GP
Sbjct: 390  QPSAKREGFATIPDVTWSDIGALSQTRDELHMAIVQPIRHPELFSVVGIDAPSGVLLWGP 449

Query: 818  PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
            PGC KTL+A+AVA+E+  NF++VKGPEL +K+VGESE+AVR +FA+AR+++P +IFFDE+
Sbjct: 450  PGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFARARSSSPCVIFFDEL 509

Query: 878  DGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            D L   R    D +S S  RV++ LL ELDGL  R  V VI ATNRPD IDPA++RPGR 
Sbjct: 510  DALVPRR---DDSMSESSARVVNTLLTELDGLDARKAVYVIGATNRPDMIDPAMVRPGRL 566

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDV--NIRELACLS--EGCTGADISLICR--- 989
            D+LLYV  P+ ++R EI + H +K P + D    I+E+      +G +GADI+ + R   
Sbjct: 567  DKLLYVDLPSPSERFEILKTHTKKTPINEDSWQAIKEIVASDKCDGFSGADIAALVREAA 626

Query: 990  ------------------EAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAK 1031
                              EA    IE   D+ R+T +H   A +   PS     +E   K
Sbjct: 627  TLALRAALESIGAFETPAEAEPEGIERKTDSVRVTAEHFAHAAQKTLPS---VSREQRLK 683

Query: 1032 FQRLVHSNAEADESGYQLR 1050
            ++R+    A     G + R
Sbjct: 684  YERMRDKYAGVPTRGRRQR 702



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 136/251 (54%), Gaps = 6/251 (2%)

Query: 756  KVRPSAMREVI---LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            + RP A   VI      P +    +GG +   TQL+E       H E +   G   P G+
Sbjct: 57   RKRPRAAPSVIAAKYAPPDLDLGALGGLQPQITQLLEIAALALFHPEIYLHTGVPRPKGV 116

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L+ G PG  KT + R +A E  L F++V  P + S   GESEK +R  F +A+  AP I+
Sbjct: 117  LLHGVPGGGKTQLVRCLAGELKLPFISVSAPSIVSGMSGESEKTLRDTFDEAKKVAPCIL 176

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN-VTVIAATNRPDKIDPALL 931
            F DE+D +   R  E+    +  R+++QLL  +D L      V +I ATNRPD +DPAL 
Sbjct: 177  FLDEVDAITPKR--ENAQREMERRIVAQLLTCMDDLAASEEPVIIIGATNRPDSLDPALR 234

Query: 932  RPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREA 991
            R GRFD  + +G P++  RE+I ++   K+  S DV+ R+LA  + G  GAD++ +  EA
Sbjct: 235  RAGRFDHEIEMGVPSQEGREQILKVLCSKLRLSGDVDFRQLAKATPGYIGADLTALTTEA 294

Query: 992  AISAIEENLDA 1002
             I A++   D+
Sbjct: 295  GIIAVKRIFDS 305


>gi|344278411|ref|XP_003410988.1| PREDICTED: nuclear valosin-containing protein [Loxodonta africana]
          Length = 855

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 328/591 (55%), Gaps = 65/591 (10%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LAR  A +  + L  V   EVVS   GESEQ L E+F+ 
Sbjct: 292  LGVVPPRGVLLHGPPGCGKTLLARAIAGELDLPLLKVAATEVVSGVSGESEQKLRELFEQ 351

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP V+FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 352  AVSNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVATTARVLVIGATNR 411

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR D+EI +               +P  A R  IL  L   +   L ++
Sbjct: 412  PDSLDPALRRAGRFDQEICL--------------GIPDEASRERILQTLCRKLR--LPEA 455

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
                +L+  T GFVGADL ALC EAA+  +   S++          G   E EG      
Sbjct: 456  FHFRHLAHLTPGFVGADLMALCREAAMCAV---SRLLMKPQEQQKRGP--EMEGLPAAEC 510

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
            Q        T  ++D L             LL    PL                      
Sbjct: 511  QGERIGPGHTSKTQDELQRL--------LGLLRDQEPLS--------------------- 541

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
               E+   L +EL DF  A   V+PSA RE  + VP V W D+G   +V+ +L  A+  P
Sbjct: 542  --EEQLQGLCIELNDFIVALASVQPSAKREGFVTVPNVTWADIGALEDVREELTMAILAP 599

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
             ++ + F+ +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE
Sbjct: 600  VRNPDQFRALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 659

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNV 914
            +AVR +F +AR +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V
Sbjct: 660  RAVRQVFQRARNSAPCVIFFDEVDALCPRRSDREAGASV--RVVNQLLTEMDGLETRQQV 717

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRE 971
             ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+  
Sbjct: 718  FIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRFAILKTITKNGTKPPLDADVNLEA 777

Query: 972  LAC-LSEGC-TGADISLICREAAISAIEENLDASRITMQ--HLKTAIRHVQ 1018
            +A  L   C TGAD+S + REA++ A+ + +   +   +   LK +++H +
Sbjct: 778  VAGDLRCDCYTGADLSALVREASLCALRQEMARQKSGNEKGELKISLKHFE 828



 Score =  181 bits (458), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 146/249 (58%), Gaps = 12/249 (4%)

Query: 763  REVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            R + L++  VK+EDVGG      ++ + +    +H E ++ +G  PP G+L+ GPPGC K
Sbjct: 252  RGLELQISNVKFEDVGGNDGTLKEVCKVLVH-MRHPEVYQHLGVVPPRGVLLHGPPGCGK 310

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL+ARA+A E  L  L V   E+ S   GESE+ +R LF +A +NAP ++F DEID +  
Sbjct: 311  TLLARAIAGELDLPLLKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITP 370

Query: 883  IRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRL 939
             R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFD+ 
Sbjct: 371  KR--EVASKDMERRIVAQLLTCMDDLNNVATTARVLVIGATNRPDSLDPALRRAGRFDQE 428

Query: 940  LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN 999
            + +G P+E  RE I +   RK+      + R LA L+ G  GAD+  +CREAA+ A+   
Sbjct: 429  ICLGIPDEASRERILQTLCRKLRLPEAFHFRHLAHLTPGFVGADLMALCREAAMCAV--- 485

Query: 1000 LDASRITMQ 1008
               SR+ M+
Sbjct: 486  ---SRLLMK 491



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 564 PSAKREGFVTVPNVTWADIGALEDVREELTMA--ILAPVRNPDQFRALGLVTPAGVLLAG 621

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 622 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDE 681

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 682 VDALCPRRSDREAGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 741

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA R  IL  +        LD++V   ++A       +
Sbjct: 742 TLFV--------------GLPPPADRFAILKTITKNGTKPPLDADVNLEAVAGDLRCDCY 787

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA+L  LR+    Q S +
Sbjct: 788 TGADLSALVREASLCALRQEMARQKSGN 815


>gi|326482765|gb|EGE06775.1| ribosome biogenesis ATPase RIX7 [Trichophyton equinum CBS 127.97]
          Length = 743

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/632 (37%), Positives = 351/632 (55%), Gaps = 79/632 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGG+      L+++I+    +  + S+  ++P +GVLLHGPPG GKT +A   A + 
Sbjct: 176  LADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAAEL 235

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV    ++ P ++S   GESE+AL + F+ A + AP ++F+DE+DAI P R+    E+ +
Sbjct: 236  GVPFIAISAPSIISGMSGESEKALRDHFEEAKKVAPCLIFMDEIDAITPKRESAQREMEK 295

Query: 529  RMVATLLNLMD--GVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  MD   + +TDG  V+V+AATNRPDS++PALRR GR D+EI +         
Sbjct: 296  RIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINL--------- 346

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VPS   R +IL AL   M  +  D + ++L+  T GFVGADL  L + AA   +
Sbjct: 347  -----TVPSEPVREQILRALTREMNLAD-DLDFKFLAKGTAGFVGADLNDLVSTAATAAI 400

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
            +RY  +  S+     TG   + E      L     S+ + E                   
Sbjct: 401  KRYLDLLKSA-----TGEEMDIE-----ELPPPGVSKKVME------------------- 431

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
                   LR  +    +  H    ++   +++S +         DF  A  K++PS+ RE
Sbjct: 432  -------LRQLIKRARETPH----EADPQIYVSNE---------DFLIALPKIQPSSKRE 471

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
                +P   W D+G    V+ +L+ A+  P ++ E + R+G   PTG+L++GPPGC KTL
Sbjct: 472  GFATIPATTWADIGSLGSVREELVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTL 531

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F++AR++ P +IFFDE+D L   R
Sbjct: 532  LAKAVANESRANFISIKGPELLNKYVGESERAVRQVFSRARSSVPCVIFFDELDALVPRR 591

Query: 885  GKESDGVS-VSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
                D +S  S RV++ LL ELDGL   R  + VIAATNRPD IDPA+LRPGR + LL+V
Sbjct: 592  ---DDTMSEASARVVNTLLTELDGLGSSRNGIYVIAATNRPDIIDPAMLRPGRLETLLFV 648

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              P   +R E+ R  +RK+P      + ELA   EG +GAD+  + R A  SAI+     
Sbjct: 649  NLPGRDERAEVLRTLIRKLPIEMTDELVELARSCEGFSGADLGSLLRRAGYSAIKRR--- 705

Query: 1003 SRITMQHLKTAIRHVQPS--EIHSYKELSAKF 1032
              I  +    A R ++PS  ++  Y+ L   +
Sbjct: 706  DTIKFEDFVAAKREIRPSVTDMKKYESLKKDW 737



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 137/234 (58%), Gaps = 6/234 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V   D+GG  +V  QL E +  P    + F     +PP G+L+ GPPGC KT++A A A+
Sbjct: 174  VSLADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAA 233

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G+ F+A+  P + S   GESEKA+R  F +A+  AP +IF DEID +   R  ES   
Sbjct: 234  ELGVPFIAISAPSIISGMSGESEKALRDHFEEAKKVAPCLIFMDEIDAITPKR--ESAQR 291

Query: 892  SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++QLL  +D L         V V+AATNRPD +DPAL R GRFD+ + +  P+E
Sbjct: 292  EMEKRIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINLTVPSE 351

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              RE+I R   R++  + D++ + LA  + G  GAD++ +   AA +AI+  LD
Sbjct: 352  PVREQILRALTREMNLADDLDFKFLAKGTAGFVGADLNDLVSTAATAAIKRYLD 405



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 159/293 (54%), Gaps = 29/293 (9%)

Query: 361 HESNAFV-INHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKE 419
           HE++  + +++E  +   P +   SK  REG        F  + AT   DI  LG + +E
Sbjct: 444 HEADPQIYVSNEDFLIALPKIQPSSK--REG--------FATIPATTWADIGSLGSVREE 493

Query: 420 YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPE 479
             ++  I+         S +G+    GVLL GPPG GKT LA+  A++S  N  ++ GPE
Sbjct: 494 --LVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTLLAKAVANESRANFISIKGPE 551

Query: 480 VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD 539
           ++++  GESE+A+ +VF  A  S P V+F DELDA+ P R D   E S R+V TLL  +D
Sbjct: 552 LLNKYVGESERAVRQVFSRARSSVPCVIFFDELDALVPRRDDTMSEASARVVNTLLTELD 611

Query: 540 GVCRT-DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL 598
           G+  + +G+ VIAATNRPD I+PA+ RPGRL+       + LF         +P   +R 
Sbjct: 612 GLGSSRNGIYVIAATNRPDIIDPAMLRPGRLE-------TLLF-------VNLPGRDERA 657

Query: 599 EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           E+L  L+  +   + D  VE L+ +  GF GADL +L   A    ++R   I+
Sbjct: 658 EVLRTLIRKLPIEMTDELVE-LARSCEGFSGADLGSLLRRAGYSAIKRRDTIK 709


>gi|348577659|ref|XP_003474601.1| PREDICTED: nuclear valosin-containing protein-like isoform 1 [Cavia
            porcellus]
          Length = 849

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/616 (38%), Positives = 337/616 (54%), Gaps = 81/616 (13%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L ++F+ 
Sbjct: 291  LGIVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFEQ 350

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP +VFIDE+DAI P R+   +++ +R+VA LL+ MD    V     VLVI ATNR
Sbjct: 351  AVSSAPCIVFIDEIDAITPKREVASKDMERRIVAQLLSCMDDLNNVAAVAQVLVIGATNR 410

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P    R  IL  L   +    L  
Sbjct: 411  PDSLDPALRRAGRFDREICL--------------GIPDAPARERILQTLCRKLR---LPE 453

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
               +  +A  T GFVGADL ALC EAA+  + R   ++Q             E EG    
Sbjct: 454  TFNFCHLAHLTPGFVGADLMALCREAAVCAVNRALMRLQ------EQQRRDLEGEGGQRE 507

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
             L+    S    E  R                       L G + +     H+ +S+   
Sbjct: 508  TLETESTSETQDEFQR-----------------------LLGLLRD-----HDPLSE--- 536

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
                 E+   L +E+ DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+ 
Sbjct: 537  -----EQMQGLCIEMNDFIVALASVQPSAKREGFVTVPNVTWADIGALEDIREELTMAIL 591

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGE
Sbjct: 592  APVRNPDRFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 651

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F +A+ +AP +IFFDE+D L   R  +  G SV  RV++QLL E+DGL  R 
Sbjct: 652  SERAVRQVFQRAKNSAPCVIFFDEMDALCPRRSDKETGASV--RVVNQLLTEMDGLEARQ 709

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNI 969
             V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+
Sbjct: 710  QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNL 769

Query: 970  RELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
              +A  L   C +GAD+S + REA++ A+ + +            +I+  H + A + V+
Sbjct: 770  EAIANDLRCDCYSGADLSALIREASLCALRQEMAREKYGNGKGELKISHTHFEEAFKKVK 829

Query: 1019 PSEIHSYKELSAKFQR 1034
            PS     +++    QR
Sbjct: 830  PSISVKDQKMYEALQR 845



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/302 (38%), Positives = 162/302 (53%), Gaps = 19/302 (6%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
            L+ VD E   +  + +  R + L+   VK+EDVGG     +EV   L+       +H E 
Sbjct: 233  LQEVDGEIEAVLQKKAKARGLELQTSSVKFEDVGGNDMTLKEVCQMLIH-----MRHPEV 287

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
            +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 288  YHHLGIVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDL 347

Query: 861  FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
            F +A ++AP I+F DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 348  FEQAVSSAPCIVFIDEIDAITPKR--EVASKDMERRIVAQLLSCMDDLNNVAAVAQVLVI 405

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
             ATNRPD +DPAL R GRFDR + +G P+   RE I +   RK+      N   LA L+ 
Sbjct: 406  GATNRPDSLDPALRRAGRFDREICLGIPDAPARERILQTLCRKLRLPETFNFCHLAHLTP 465

Query: 978  GCTGADISLICREAAISAIEENLDASRITMQH---LKTAIRHVQPSEIHSYKELSAKFQR 1034
            G  GAD+  +CREAA+ A+   L   R+  Q    L+      +  E  S  E   +FQR
Sbjct: 466  GFVGADLMALCREAAVCAVNRAL--MRLQEQQRRDLEGEGGQRETLETESTSETQDEFQR 523

Query: 1035 LV 1036
            L+
Sbjct: 524  LL 525



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/259 (38%), Positives = 141/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 558 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDRFKALGLVTPAGVLLAG 615

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 616 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 675

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 676 MDALCPRRSDKETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 735

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 736 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIANDLRCDCY 781

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL+AL  EA+L  LR+
Sbjct: 782 SGADLSALIREASLCALRQ 800


>gi|281204558|gb|EFA78753.1| cell division cycle protein 48 [Polysphondylium pallidum PN500]
          Length = 791

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/595 (38%), Positives = 329/595 (55%), Gaps = 102/595 (17%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG+ K+   +++++ +         ++G++P KG+LL+GPPG GKT +AR  A+++G  
Sbjct: 202  IGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAF 261

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 262  FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVERRIV 321

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I              ++
Sbjct: 322  SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------SI 367

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSK 649
            P    RLEIL      M+   LD  V+  S+   THG+VGADLAALC E+AL C+R    
Sbjct: 368  PDATGRLEILRIHTKNMK---LDESVDLESIGNETHGYVGADLAALCTESALQCIRE--- 421

Query: 650  IQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSS 709
                 DV+                L+D   S  I ES           T D   + L  S
Sbjct: 422  ---KMDVID---------------LEDDTISAEILES--------MAVTQDHFRTALGIS 455

Query: 710  LP--LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
             P  LR TV E+                                       P+   E I 
Sbjct: 456  NPSALRETVVEV---------------------------------------PTTTWEDIG 476

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
             +  VK E       +K  +   VE P+K    F++ G +P  G+L +GPPGC KTL+A+
Sbjct: 477  GLENVKRE-------LKETVQYPVEHPEK----FRKFGMQPSKGVLFYGPPGCGKTLLAK 525

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            A+A+E   NF+++KGPEL + W GESE  VR LF KAR  AP ++FFDE+D +A  RG  
Sbjct: 526  AIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARARGSS 585

Query: 888  S-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            + D     DRV++Q+L E+DG+  + NV +I ATNRPD IDPA+LRPGR D+L+Y+  P+
Sbjct: 586  NGDAGGAGDRVINQILTEMDGMGVKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 645

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
               R  I +  L K P S DV++  +A  + G +GAD++ IC+ A   AI E+++
Sbjct: 646  LPSRVNILKACLNKSPVSKDVDLEFMAQKTHGFSGADLTAICQRACKLAIRESIE 700



 Score =  223 bits (567), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 159/268 (59%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++D+GG R+   Q+ E VE P +H + FK IG +PP GIL++GPPGC KT++ARAVA
Sbjct: 196  EVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVA 255

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 256  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQG- 314

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +  P+ T R
Sbjct: 315  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDISIPDATGR 373

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             EI RIH + +     V++  +   + G  GAD++ +C E+A+  I E +D         
Sbjct: 374  LEILRIHTKNMKLDESVDLESIGNETHGYVGADLAALCTESALQCIREKMDVIDLEDDTI 433

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H +TA+    PS + 
Sbjct: 434  SAEILESMAVTQDHFRTALGISNPSALR 461



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/249 (38%), Positives = 138/249 (55%), Gaps = 24/249 (9%)

Query: 402 VQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSL 460
           V  T  +DI  L  + +E   LK+ +             G++P+KGVL +GPPG GKT L
Sbjct: 467 VPTTTWEDIGGLENVKRE---LKETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLL 523

Query: 461 ARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR- 519
           A+  A++   N  ++ GPE+++  +GESE  + E+FD A Q+AP V+F DELD+IA AR 
Sbjct: 524 AKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARARG 583

Query: 520 ---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
               D G     R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRLD+ I I 
Sbjct: 584 SSNGDAGGA-GDRVINQILTEMDGMGVKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI- 641

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                         +P    R+ IL A L+    S  D ++E+++  THGF GADL A+C
Sbjct: 642 -------------PLPDLPSRVNILKACLNKSPVS-KDVDLEFMAQKTHGFSGADLTAIC 687

Query: 637 NEAALVCLR 645
             A  + +R
Sbjct: 688 QRACKLAIR 696


>gi|359073933|ref|XP_003587112.1| PREDICTED: nuclear VCP-like isoform 2 [Bos taurus]
          Length = 755

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/600 (39%), Positives = 335/600 (55%), Gaps = 67/600 (11%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V   E+VS   GESEQ L E+F+ 
Sbjct: 187  LGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQ 246

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 247  AVSSAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 306

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +   L ++
Sbjct: 307  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR--LPET 350

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
                +L+  T GFVGADL ALC EAA+  + R                L E +G      
Sbjct: 351  FHFRHLAHLTPGFVGADLMALCREAAMCAVNR---------------VLMELQGQHK--- 392

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
            ++ +   + +E  ++    A P +        +  LP++  +  +     N    S    
Sbjct: 393  KNPEIEASPSEGDQEERTGAEPTSK-------TQVLPIQEELQRLLGLLRNQDPLSE--- 442

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
               E+   L +EL DF  A   V+PSA RE    VP V W D+G   +++ +L  A+   
Sbjct: 443  ---EQLKGLCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAILVL 499

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
              + + F+ +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE
Sbjct: 500  LCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 559

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNV 914
            +AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V
Sbjct: 560  RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASV--RVVNQLLTEMDGLETRQQV 617

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRE 971
             ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+  
Sbjct: 618  FIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEA 677

Query: 972  LAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQPS 1020
            +A  L   C TGAD+S + REA+I A+++ +            +I+ +H + A + V+ S
Sbjct: 678  IAGDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKISQKHFEEAFKKVKSS 737



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/303 (38%), Positives = 161/303 (53%), Gaps = 17/303 (5%)

Query: 724  HNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREV 783
              G  +S GG    E      L+ VD E   +  + +  + + L++  VK+EDVGG    
Sbjct: 113  RKGKLNSKGGKKKKED-----LQEVDGEIEAVLQKRAKAKGLELQISSVKFEDVGGN--- 164

Query: 784  KTQLMEAVEW--PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVK 841
             T L E  +     +H E +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V 
Sbjct: 165  DTTLKEVCKMLVHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVA 224

Query: 842  GPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQL 901
              E+ S   GESE+ +R LF +A ++AP I+F DEID +   R  E     +  R+++QL
Sbjct: 225  ATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKR--EIASKDMERRIVAQL 282

Query: 902  LVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            L  +D L+       V VI ATNRPD +DPAL R GRFDR + +G P+E  RE I +   
Sbjct: 283  LTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLC 342

Query: 959  RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            RK+      + R LA L+ G  GAD+  +CREAA+ A+   L    +  QH K       
Sbjct: 343  RKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNRVL--MELQGQHKKNPEIEAS 400

Query: 1019 PSE 1021
            PSE
Sbjct: 401  PSE 403



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 142/266 (53%), Gaps = 21/266 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I++          LGL    GVLL G
Sbjct: 464 PSAKREGFATVPNVTWADIGALEDIREELTMA--ILVLLCNPDQFRVLGLVTPAGVLLAG 521

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 522 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 581

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R       S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 582 VDALCPRRSARETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 641

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 642 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 687

Query: 628 VGADLAALCNEAALVCLRRYSKIQTS 653
            GADL+AL  EA++  L++    Q S
Sbjct: 688 TGADLSALVREASICALKQEMARQKS 713


>gi|326470013|gb|EGD94022.1| ribosome biogenesis ATPase RIX7 [Trichophyton tonsurans CBS 112818]
          Length = 743

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/632 (37%), Positives = 351/632 (55%), Gaps = 79/632 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGG+      L+++I+    +  + S+  ++P +GVLLHGPPG GKT +A   A + 
Sbjct: 176  LADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAAEL 235

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV    ++ P ++S   GESE+AL + F+ A + AP ++F+DE+DAI P R+    E+ +
Sbjct: 236  GVPFIAISAPSIISGMSGESEKALRDHFEEAKKVAPCLIFMDEIDAITPKRESAQREMEK 295

Query: 529  RMVATLLNLMD--GVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  MD   + +TDG  V+V+AATNRPDS++PALRR GR D+EI +         
Sbjct: 296  RIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINL--------- 346

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VPS   R +IL AL   M  +  D + ++L+  T GFVGADL  L + AA   +
Sbjct: 347  -----TVPSEPVREQILRALTREMNLAD-DLDFKFLAKGTAGFVGADLNDLVSTAATAAI 400

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
            +RY  +  S+     TG   + E      L     S+ + E                   
Sbjct: 401  KRYLDLLKSA-----TGEEMDIE-----ELPPPGVSKKVME------------------- 431

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
                   LR  +    +  H    ++   +++S +         DF  A  K++PS+ RE
Sbjct: 432  -------LRQLIKRARETPH----EADPQIYVSNE---------DFLIALPKIQPSSKRE 471

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
                +P   W D+G    V+ +L+ A+  P ++ E + R+G   PTG+L++GPPGC KTL
Sbjct: 472  GFATIPATTWADIGSLGSVREELVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTL 531

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F++AR++ P +IFFDE+D L   R
Sbjct: 532  LAKAVANESRANFISIKGPELLNKYVGESERAVRQVFSRARSSVPCVIFFDELDALVPRR 591

Query: 885  GKESDGVS-VSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
                D +S  S RV++ LL ELDGL   R  + VIAATNRPD IDPA+LRPGR + LL+V
Sbjct: 592  ---DDTMSEASARVVNTLLTELDGLGSSRNGIYVIAATNRPDIIDPAMLRPGRLETLLFV 648

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              P   +R E+ R  +RK+P      + ELA   EG +GAD+  + R A  SAI+     
Sbjct: 649  NLPGRDERAEVLRTLIRKLPIEMTDELVELARSCEGFSGADLGSLLRRAGYSAIKRR--- 705

Query: 1003 SRITMQHLKTAIRHVQPS--EIHSYKELSAKF 1032
              I  +    A R ++PS  ++  Y+ L   +
Sbjct: 706  DTIKFEDFVAAKREIRPSVTDMKKYESLKKDW 737



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 137/234 (58%), Gaps = 6/234 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V   D+GG  +V  QL E +  P    + F     +PP G+L+ GPPGC KT++A A A+
Sbjct: 174  VSLADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAA 233

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G+ F+A+  P + S   GESEKA+R  F +A+  AP +IF DEID +   R  ES   
Sbjct: 234  ELGVPFIAISAPSIISGMSGESEKALRDHFEEAKKVAPCLIFMDEIDAITPKR--ESAQR 291

Query: 892  SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++QLL  +D L         V V+AATNRPD +DPAL R GRFD+ + +  P+E
Sbjct: 292  EMEKRIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINLTVPSE 351

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              RE+I R   R++  + D++ + LA  + G  GAD++ +   AA +AI+  LD
Sbjct: 352  PVREQILRALTREMNLADDLDFKFLAKGTAGFVGADLNDLVSTAATAAIKRYLD 405



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 159/293 (54%), Gaps = 29/293 (9%)

Query: 361 HESNAFV-INHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKE 419
           HE++  + +++E  +   P +   SK  REG        F  + AT   DI  LG + +E
Sbjct: 444 HEADPQIYVSNEDFLIALPKIQPSSK--REG--------FATIPATTWADIGSLGSVREE 493

Query: 420 YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPE 479
             ++  I+         S +G+    GVLL GPPG GKT LA+  A++S  N  ++ GPE
Sbjct: 494 --LVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTLLAKAVANESRANFISIKGPE 551

Query: 480 VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD 539
           ++++  GESE+A+ +VF  A  S P V+F DELDA+ P R D   E S R+V TLL  +D
Sbjct: 552 LLNKYVGESERAVRQVFSRARSSVPCVIFFDELDALVPRRDDTMSEASARVVNTLLTELD 611

Query: 540 GVCRT-DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL 598
           G+  + +G+ VIAATNRPD I+PA+ RPGRL+       + LF         +P   +R 
Sbjct: 612 GLGSSRNGIYVIAATNRPDIIDPAMLRPGRLE-------TLLF-------VNLPGRDERA 657

Query: 599 EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           E+L  L+  +   + D  VE L+ +  GF GADL +L   A    ++R   I+
Sbjct: 658 EVLRTLIRKLPIEMTDELVE-LARSCEGFSGADLGSLLRRAGYSAIKRRDTIK 709


>gi|302503873|ref|XP_003013896.1| hypothetical protein ARB_08008 [Arthroderma benhamiae CBS 112371]
 gi|291177462|gb|EFE33256.1| hypothetical protein ARB_08008 [Arthroderma benhamiae CBS 112371]
          Length = 743

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/632 (36%), Positives = 352/632 (55%), Gaps = 79/632 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGG+      L+++I+    +  + S+  ++P +GVLLHGPPG GKT +A   A + 
Sbjct: 176  LADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAAEL 235

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV    ++ P ++S   GESE+AL + F+ A + AP ++F+DE+DAI P R+    E+ +
Sbjct: 236  GVPFIAISAPSIISGMSGESEKALRDHFEEAKKVAPCLIFMDEIDAITPKRESAQREMEK 295

Query: 529  RMVATLLNLMD--GVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  MD   + +TDG  V+V+AATNRPDS++PALRR GR D+EI +         
Sbjct: 296  RIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINL--------- 346

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VPS   R +IL AL   M  +  D + ++L+  T GFVGADL  L + AA   +
Sbjct: 347  -----TVPSEPVREQILRALTREMNLAD-DLDFKFLAKGTAGFVGADLNDLVSTAATAAI 400

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
            +RY  +  S+     TG   + E      L  +  S+ + E                   
Sbjct: 401  KRYLDLLKSA-----TGEEMDIE-----ELPPAGVSKKVME------------------- 431

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
                   LR  +    +  H    ++   +++S +         DF  A  K++PS+ RE
Sbjct: 432  -------LRQLIKRARETPH----EADPQIYVSNE---------DFLTALPKIQPSSKRE 471

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
                +P   W D+G    V+ +L+ A+  P ++ E + R+G   PTG+L++GPPGC KTL
Sbjct: 472  GFATIPATTWADIGSLGSVREELVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTL 531

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F++AR++ P +IFFDE+D L   R
Sbjct: 532  LAKAVANESRANFISIKGPELLNKYVGESERAVRQVFSRARSSVPCVIFFDELDALVPRR 591

Query: 885  GKESDGVS-VSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
                D +S  S RV++ LL ELDGL   R  + VIAATNRPD IDPA+LRPGR + LL+V
Sbjct: 592  ---DDTMSEASARVVNTLLTELDGLGSSRNGIYVIAATNRPDIIDPAMLRPGRLETLLFV 648

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              P   +R ++ R  +RK+P      + ELA   EG +GAD+  + R A  SAI+     
Sbjct: 649  NLPGRDERADVLRTLIRKLPIEMTDELVELARSCEGFSGADLGSLLRRAGYSAIKRR--- 705

Query: 1003 SRITMQHLKTAIRHVQPS--EIHSYKELSAKF 1032
              I  +    A R ++PS  ++  Y+ L   +
Sbjct: 706  DTIKFEDFVAAKREIRPSVTDMKKYESLKKDW 737



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 137/234 (58%), Gaps = 6/234 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V   D+GG  +V  QL E +  P    + F     +PP G+L+ GPPGC KT++A A A+
Sbjct: 174  VSLADLGGVDDVIQQLEELIVLPMTRPQIFSASNVQPPRGVLLHGPPGCGKTMIANAFAA 233

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G+ F+A+  P + S   GESEKA+R  F +A+  AP +IF DEID +   R  ES   
Sbjct: 234  ELGVPFIAISAPSIISGMSGESEKALRDHFEEAKKVAPCLIFMDEIDAITPKR--ESAQR 291

Query: 892  SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++QLL  +D L         V V+AATNRPD +DPAL R GRFD+ + +  P+E
Sbjct: 292  EMEKRIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINLTVPSE 351

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              RE+I R   R++  + D++ + LA  + G  GAD++ +   AA +AI+  LD
Sbjct: 352  PVREQILRALTREMNLADDLDFKFLAKGTAGFVGADLNDLVSTAATAAIKRYLD 405



 Score =  163 bits (413), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/293 (36%), Positives = 159/293 (54%), Gaps = 29/293 (9%)

Query: 361 HESNAFV-INHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKE 419
           HE++  + +++E  +   P +   SK  REG        F  + AT   DI  LG + +E
Sbjct: 444 HEADPQIYVSNEDFLTALPKIQPSSK--REG--------FATIPATTWADIGSLGSVREE 493

Query: 420 YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPE 479
             ++  I+         S +G+    GVLL GPPG GKT LA+  A++S  N  ++ GPE
Sbjct: 494 --LVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTLLAKAVANESRANFISIKGPE 551

Query: 480 VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD 539
           ++++  GESE+A+ +VF  A  S P V+F DELDA+ P R D   E S R+V TLL  +D
Sbjct: 552 LLNKYVGESERAVRQVFSRARSSVPCVIFFDELDALVPRRDDTMSEASARVVNTLLTELD 611

Query: 540 GVCRT-DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL 598
           G+  + +G+ VIAATNRPD I+PA+ RPGRL+       + LF         +P   +R 
Sbjct: 612 GLGSSRNGIYVIAATNRPDIIDPAMLRPGRLE-------TLLF-------VNLPGRDERA 657

Query: 599 EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           ++L  L+  +   + D  VE L+ +  GF GADL +L   A    ++R   I+
Sbjct: 658 DVLRTLIRKLPIEMTDELVE-LARSCEGFSGADLGSLLRRAGYSAIKRRDTIK 709


>gi|358416016|ref|XP_003583271.1| PREDICTED: nuclear VCP-like isoform 1 [Bos taurus]
          Length = 755

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/600 (39%), Positives = 334/600 (55%), Gaps = 67/600 (11%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V   E+VS   GESEQ L E+F+ 
Sbjct: 187  LGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQ 246

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 247  AVSSAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 306

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +   L ++
Sbjct: 307  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR--LPET 350

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
                +L+  T GFVGADL ALC EAA+  + R                L E +G      
Sbjct: 351  FHFRHLAHLTPGFVGADLMALCREAAMCAVNR---------------VLMELQGQHK--- 392

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
            ++ +   + +E  ++    A P +        +  LP++  +  +     N    S    
Sbjct: 393  KNPEIEASPSEGDQEERTGAEPTSK-------TQVLPIQEELQRLLGLLRNQDPLSE--- 442

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
               E+   L +EL DF  A   V+PSA RE    VP V W D+G   +++ +L  A+   
Sbjct: 443  ---EQLKGLCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAILVL 499

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
              + + F+  G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE
Sbjct: 500  LCNPDQFRVFGLETPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 559

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNV 914
            +AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V
Sbjct: 560  RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASV--RVVNQLLTEMDGLETRQQV 617

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRE 971
             ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+  
Sbjct: 618  FIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEA 677

Query: 972  LAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQPS 1020
            +A  L   C TGAD+S + REA+I A+++ +            +I+ +H + A + V+ S
Sbjct: 678  IAGDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKISQKHFEEAFKKVKSS 737



 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/303 (38%), Positives = 161/303 (53%), Gaps = 17/303 (5%)

Query: 724  HNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREV 783
              G  +S GG    E      L+ VD E   +  + +  + + L++  VK+EDVGG    
Sbjct: 113  RKGKLNSKGGKKKKED-----LQEVDGEIEAVLQKRAKAKGLELQISSVKFEDVGGN--- 164

Query: 784  KTQLMEAVEW--PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVK 841
             T L E  +     +H E +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V 
Sbjct: 165  DTTLKEVCKMLVHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVA 224

Query: 842  GPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQL 901
              E+ S   GESE+ +R LF +A ++AP I+F DEID +   R  E     +  R+++QL
Sbjct: 225  ATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKR--EIASKDMERRIVAQL 282

Query: 902  LVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            L  +D L+       V VI ATNRPD +DPAL R GRFDR + +G P+E  RE I +   
Sbjct: 283  LTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLC 342

Query: 959  RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            RK+      + R LA L+ G  GAD+  +CREAA+ A+   L    +  QH K       
Sbjct: 343  RKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNRVL--MELQGQHKKNPEIEAS 400

Query: 1019 PSE 1021
            PSE
Sbjct: 401  PSE 403



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/266 (37%), Positives = 141/266 (53%), Gaps = 21/266 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I++           GL    GVLL G
Sbjct: 464 PSAKREGFATVPNVTWADIGALEDIREELTMA--ILVLLCNPDQFRVFGLETPAGVLLAG 521

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 522 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 581

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R       S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 582 VDALCPRRSARETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 641

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 642 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 687

Query: 628 VGADLAALCNEAALVCLRRYSKIQTS 653
            GADL+AL  EA++  L++    Q S
Sbjct: 688 TGADLSALVREASICALKQEMARQKS 713


>gi|363754403|ref|XP_003647417.1| hypothetical protein Ecym_6218 [Eremothecium cymbalariae DBVPG#7215]
 gi|356891054|gb|AET40600.1| hypothetical protein Ecym_6218 [Eremothecium cymbalariae DBVPG#7215]
          Length = 838

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 245/690 (35%), Positives = 378/690 (54%), Gaps = 101/690 (14%)

Query: 407  EQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCA 465
            + D+S LGG+    A L ++I    +   + +S G+ P +GVL HGPPG GKTS+A   A
Sbjct: 207  QTDLSSLGGMDDVVAQLMELIGLPILHPEIYASTGIEPPRGVLFHGPPGCGKTSIANALA 266

Query: 466  HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE- 524
             +  V   +++ P VVS   GESE+ + ++FD A   AP +VF DE+DAIAP R  G + 
Sbjct: 267  GELQVPFISISAPSVVSGMSGESEKKIRDLFDEAKSLAPCLVFFDEIDAIAPKRDGGAQR 326

Query: 525  ELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
            E+ +R+VA LL  MD +   +TDG  V+VI ATNRPDS++ ALRR GR DREI ++    
Sbjct: 327  EMERRIVAQLLTSMDELSFDKTDGKPVIVIGATNRPDSLDAALRRAGRFDREICLN---- 382

Query: 581  FSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNE 638
                      VP+ A R+ IL  + S ++   ++ ++++  LS  T GFVGADL AL   
Sbjct: 383  ----------VPNEASRMHILKKMTSNLK---INGQIDFVKLSKLTPGFVGADLKALVTA 429

Query: 639  AALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDT--MLQDSDCSRNITESSRDCLDSASP 696
            A    ++R  +    S             G+SD   M  D D  ++  +++ + +D    
Sbjct: 430  AGTCAIKRIFRTFAISG------------GNSDAKEMEIDGDIEQDALKNTANLIDP--- 474

Query: 697  CTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMK 756
                         LPL      I  +F N   D       +E+   L ++  DF KA   
Sbjct: 475  -------------LPL-----SIVQHFLNNFPDP----LNAEQLETLTIKYEDFLKALPT 512

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            ++P+A RE    VP V W +VG   +++ +L  A+  P K  E ++++G   P G+L++G
Sbjct: 513  IQPTAKREGFATVPDVTWTNVGALTKIRMELNMAIVQPIKRPELYEKVGISAPAGVLLWG 572

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F +ARA+ P +IFFDE
Sbjct: 573  PPGCGKTLIAKAVANESRANFISIKGPELLNKYVGESERAIRQVFTRARASVPCVIFFDE 632

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            +D L   R  ++     S RV++ LL ELDGL+ R  + VIAATNRPD IDPA+LRPGR 
Sbjct: 633  LDALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIFVIAATNRPDIIDPAMLRPGRL 690

Query: 937  DRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELACLSEGC---TGADISLICREA 991
            D+ L++  P+ T++ +I +  +R    P + ++++  +    E C   +GAD++ + RE+
Sbjct: 691  DKTLFIELPDLTEKHDILKTLIRSNGTPLAPNIDLSVIVS-DERCRNFSGADLASLVRES 749

Query: 992  AI--------------SAIEENLDAS------------RITMQHLKTAIRHVQPSEIHSY 1025
            ++              S +E NLD               +TM+  + A+R ++PS +   
Sbjct: 750  SVLALKRNFFKSDEIGSVLENNLDREFEDLSVGVSEDVVVTMKDFQLALRKIKPS-VSDK 808

Query: 1026 KELSAKFQRLVHSNAEADESGYQLRPSKSI 1055
              L  K++RL       DE   Q  P+ ++
Sbjct: 809  DRL--KYERLNKRMGWNDEVQLQGEPNSTL 836


>gi|19112584|ref|NP_595792.1| AAA family ATPase Rix7 (predicted) [Schizosaccharomyces pombe 972h-]
 gi|74582013|sp|O14325.1|YB7A_SCHPO RecName: Full=Uncharacterized AAA domain-containing protein C16E9.10c
 gi|2467272|emb|CAB16902.1| AAA family ATPase Rix7 (predicted) [Schizosaccharomyces pombe]
          Length = 779

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/621 (38%), Positives = 345/621 (55%), Gaps = 83/621 (13%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G+ P +GVLLHGPPG GKT LA   A++ GV   +++ P +VS   GESE+ + EVF+ A
Sbjct: 204  GIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEA 263

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
               AP ++FIDE+DA+ P R+    E+ +R+VA  L  MD +   +TDG  VLVI ATNR
Sbjct: 264  KSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNR 323

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++ ALRR GR DREI +               VPS   R +IL  +  G++ S  D 
Sbjct: 324  PDSLDSALRRAGRFDREICL--------------TVPSQDAREKILRTMAKGLKLSG-DF 368

Query: 616  EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
            +   L+  T G+VGADL AL   A ++ ++R         + +    L + + +SD    
Sbjct: 369  DFRQLAKQTPGYVGADLKALTAAAGIIAIKR---------IFNEISPLNKLDLNSDPRFN 419

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
            + D        S   LDS             + SLPL    S I   + N   D      
Sbjct: 420  ELD--------SDMALDS-------------NDSLPLDH--SSIIQRYLNAHPDP----L 452

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
              E+   L +   DF +A  KV+PS+ RE    VP V W ++G  + ++ +L  A+  P 
Sbjct: 453  SPEELEPLAICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPI 512

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            K  E ++ +G   PTG+L++GPPGC KTL+A+AVA+E+  NF++++GPEL +K+VGESE+
Sbjct: 513  KRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESER 572

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNV 914
            AVR +F +ARA++P +IFFDE+D +   R    D +S  S RV++ LL ELDGL  R  V
Sbjct: 573  AVRQVFLRARASSPCVIFFDELDAMVPRR---DDSLSEASSRVVNTLLTELDGLSDRSGV 629

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC 974
             VIAATNRPD IDPA+LRPGR D+ L V  P+  +R EI +   ++ P   +VN+  L  
Sbjct: 630  YVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLG- 688

Query: 975  LSEGC---TGADISLICREAAISAI-----------------EENLDASRITMQHLKTAI 1014
              E C   +GAD++ + REAA++A+                    L+  R+T    + A 
Sbjct: 689  RDERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSALEPIRVTNADFELAF 748

Query: 1015 RHVQPSEIHSYKELSAKFQRL 1035
            ++++PS     ++   K+QRL
Sbjct: 749  KNIKPSVSDRDRQ---KYQRL 766



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 136/226 (60%), Gaps = 6/226 (2%)

Query: 776 DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGL 835
           D+GG  +   +L+E V  P KH E ++  G  PP G+L+ GPPGC KT++A A+A+E G+
Sbjct: 175 DIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGV 234

Query: 836 NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 895
            F+++  P + S   GESEK VR +F +A++ AP ++F DEID +   R  ES    +  
Sbjct: 235 PFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKR--ESAQREMER 292

Query: 896 RVMSQLLVELDGL-HQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
           R+++Q L  +D L  ++ +   V VI ATNRPD +D AL R GRFDR + +  P++  RE
Sbjct: 293 RIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDARE 352

Query: 952 EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           +I R   + +  S D + R+LA  + G  GAD+  +   A I AI+
Sbjct: 353 KILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 124/209 (59%), Gaps = 15/209 (7%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
           S+G+    GVLL GPPG GKT LA+  A++S  N  ++ GPE++++  GESE+A+ +VF 
Sbjct: 520 SVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFL 579

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            A  S+P V+F DELDA+ P R D   E S R+V TLL  +DG+    GV VIAATNRPD
Sbjct: 580 RARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPD 639

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME-HSLLDSE 616
            I+PA+ RPGRLD+ + +D+              P   +R+EIL  L      H  ++ +
Sbjct: 640 IIDPAMLRPGRLDKTLLVDL--------------PDAHERVEILKTLTKQTPLHEEVNLD 685

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           V         F GADLAAL  EAA+  LR
Sbjct: 686 VLGRDERCSNFSGADLAALVREAAVTALR 714


>gi|343960745|dbj|BAK61962.1| nuclear valosin-containing protein-like [Pan troglodytes]
          Length = 585

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/603 (39%), Positives = 328/603 (54%), Gaps = 78/603 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L E+F+ 
Sbjct: 22   LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 81

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 82   AVLNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 141

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 142  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR---LPQ 184

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
              ++  +A  T GFVGADL ALC EAA+  + R   K+Q                     
Sbjct: 185  AFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ------------------ 226

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
                                  +P   DLP+  +          SE  D     +     
Sbjct: 227  --------------------KKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRD 266

Query: 733  GMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               +SE+    L +EL DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+
Sbjct: 267  QDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAI 326

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 327  LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 386

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A+ +AP +IFFD +D L   R     G SV  RV++QLL E+DGL  R
Sbjct: 387  ESERAVRQVFQRAKNSAPCVIFFDGVDALCPRRSDRETGASV--RVVNQLLTEMDGLEAR 444

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN
Sbjct: 445  QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 504

Query: 969  IRELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHV 1017
            +  +A  L   C TGAD+S + REA+I A+ + +            +++ +H + A + V
Sbjct: 505  LEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKV 564

Query: 1018 QPS 1020
            + S
Sbjct: 565  RSS 567



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 122/208 (58%), Gaps = 5/208 (2%)

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            +H E +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+
Sbjct: 14   RHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQ 73

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RV 912
             +R LF +A  NAP IIF DEID +   R  E     +  R+++QLL  +D L+      
Sbjct: 74   KLRELFEQAVLNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATA 131

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIREL 972
             V VI ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      +   L
Sbjct: 132  RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHL 191

Query: 973  ACLSEGCTGADISLICREAAISAIEENL 1000
            A L+ G  GAD+  +CREAA+ A+   L
Sbjct: 192  AHLTPGFVGADLMALCREAAMCAVNRVL 219



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 143/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 294 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 351

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F D 
Sbjct: 352 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDG 411

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 412 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 471

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 472 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 517

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 518 TGADLSALVREASICALRQEMARQKSGN 545


>gi|345802539|ref|XP_537239.3| PREDICTED: nuclear VCP-like isoform 2 [Canis lupus familiaris]
          Length = 850

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 243/593 (40%), Positives = 326/593 (54%), Gaps = 68/593 (11%)

Query: 421  AILKDI---IISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNG 477
            A LK++   +I          LG  P +GVLLHGPPG GKT LA   A +  + +  V  
Sbjct: 266  ATLKEVCKMLIHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAA 325

Query: 478  PEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNL 537
             EVVS   GESEQ L E+F+ A  +AP V+FIDE+DAI P R+   +++ +R+VA LL  
Sbjct: 326  TEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTC 385

Query: 538  MDGVCRTDG---VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP 594
            MD +  T     VLVI ATNRPDS++PALRR GR DREI +               +P  
Sbjct: 386  MDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICL--------------GIPDE 431

Query: 595  AQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRY-SKIQT 652
            A R  IL  L   +   L ++    +L+  T GFVGADL ALC EAA+  + R    +Q 
Sbjct: 432  ASRERILQTLCRKLR--LPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQE 489

Query: 653  SSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPL 712
                    GTL    G  D         R  TE +     S +P        LL S  PL
Sbjct: 490  QQPTDPEMGTLPSKGGQED---------RVGTEPA-----SETPDELQWLLELLRSQDPL 535

Query: 713  RGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKV 772
                                     E+   L +E  DF  A   V+PSA RE  + VP V
Sbjct: 536  S-----------------------EEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPSV 572

Query: 773  KWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASE 832
             W D+G   +++ +L  A+  P +  E F+ +G   P G+L+ GPPGC KTL+A+AVA+E
Sbjct: 573  TWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANE 632

Query: 833  AGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS 892
            +GLNF++VKGPEL + +VGESE+AVR +F +AR++AP +IFFDE+D L   R     G S
Sbjct: 633  SGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGAS 692

Query: 893  VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
            V  RV++QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  
Sbjct: 693  V--RVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 750

Query: 953  IFRIHLR---KIPCSSDVNIRELAC-LSEGC-TGADISLICREAAISAIEENL 1000
            I +   +   + P  +DVN+  LA  L   C +GAD+S + REA+I A+ + +
Sbjct: 751  ILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEM 803



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 138/237 (58%), Gaps = 14/237 (5%)

Query: 767 LEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
           L+V +VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPPGC K
Sbjct: 251 LQVSRVKFEDVGGNDATLKEVCKMLIH-----MRHPEVYHHLGAVPPRGVLLHGPPGCGK 305

Query: 823 TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
           TL+A A+A E  L  L V   E+ S   GESE+ +R LF +A +NAP ++F DEID +  
Sbjct: 306 TLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITP 365

Query: 883 IRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR 
Sbjct: 366 KR--EVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDRE 423

Query: 940 LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           + +G P+E  RE I +   RK+        R LA L+ G  GAD+  +CREAA+ A+
Sbjct: 424 ICLGIPDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV 480



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/259 (38%), Positives = 142/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V +    DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 559 PSAKREGFVTVPSVTWADIGALEDIREELTMA--ILAPVRSPEQFRALGLMTPAGVLLAG 616

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 617 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDE 676

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 677 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 736

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 737 TLFV--------------GLPPPADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCY 782

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL+AL  EA++  LR+
Sbjct: 783 SGADLSALVREASICALRQ 801


>gi|388851908|emb|CCF54502.1| related to RIX7-AAA-type ATPase required for biogenesis and nuclear
            export of 60S ribosomal subunits [Ustilago hordei]
          Length = 883

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 256/719 (35%), Positives = 365/719 (50%), Gaps = 113/719 (15%)

Query: 410  ISKLGGLSKEY-AILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGG+S     IL+ I +        +  G++P +GVLLHGPPG GKT LA   A + 
Sbjct: 153  LADLGGISNAIEKILELIAMPLCHPEIYAHTGVKPPRGVLLHGPPGCGKTMLAGAVAGEL 212

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV   +++ P VVS   GESE+ + + FD A+  AP ++FIDE+DAI P R+    E+ +
Sbjct: 213  GVPFLSISAPSVVSGTSGESEKTIRDTFDEAASIAPCILFIDEIDAITPKRETAQREMER 272

Query: 529  RMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  +D +   +TDG  V++I ATNRPDS++ ALRR GR D EI +         
Sbjct: 273  RIVAQLLTSLDDLSWEKTDGKPVMIIGATNRPDSLDSALRRAGRFDHEIVM--------- 323

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VP    R +IL  L   +  S  D +   L+ AT G+VGADL AL + A +V +
Sbjct: 324  -----GVPDEDGREQILRVLAQKLRLSG-DFDFRALAKATPGYVGADLTALTSAAGIVAV 377

Query: 645  RRYSKIQTSSDVLHS-------------------TGTLFEFEGHSDTMLQDSDCSR-NIT 684
            +R  +  +  D L S                   +G   E    +D  + DSD +    T
Sbjct: 378  KRIFQQLSEMDSLSSDFSAERISQAIGLHASENQSGNKQEDSTSADVEMGDSDTTAVAAT 437

Query: 685  ESSRDCLDSASPCTSDLPTSLLSSSLPL--RGTVSEIA---------------------- 720
            E + +      P  S +  +  ++  P    G V+  A                      
Sbjct: 438  EQAGEPTPVVPPAVSAVAATEANADSPAASSGAVTSTAGAEDGRQTPVAAPTVAQSNVRP 497

Query: 721  -----DNFHNGVSDSSGGMFMSEKG--------CALKLELVDFEKARMKVRPSAMREVIL 767
                 D     + DSS   F+              L +   DF  A   V+PS+ RE   
Sbjct: 498  SETFFDALPKHIRDSSIASFLKNHPSPLTDAQLAPLSITNADFLVALPSVQPSSKREGFA 557

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
             VP V W DVG     + +L  A+  P K  E F+ +G    +G+L++GPPGC KTL+A+
Sbjct: 558  TVPDVSWADVGALHSTRDELSMAIVEPIKRPELFRSVGVSASSGVLLWGPPGCGKTLLAK 617

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+  NF++VKGPEL +K+VGESEKAVR +FA+AR ++P +IFFDE+D L   R   
Sbjct: 618  AVANESRANFISVKGPELLNKYVGESEKAVRQVFARARTSSPCVIFFDELDALVPRR--- 674

Query: 888  SDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
             D +S  S RV++ LL ELDGL  RV   VIAATNRPD IDPA+ RPGR D+LLYV  P 
Sbjct: 675  DDSLSESSSRVVNTLLTELDGLETRVQTYVIAATNRPDMIDPAMCRPGRLDKLLYVDLPK 734

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLS--EGCTGADISLICREAAISAIEENL---- 1000
              +R EI +    K P S +V+++ +A  +  EG +GAD++ + REAA+ A+ E +    
Sbjct: 735  PDERLEILKTITSKTPLSDEVDLQSIAYDAKLEGFSGADLAALVREAAVLALRERILFHN 794

Query: 1001 --------------------DASRITMQHLK--TAIRHVQPS----EIHSYKELSAKFQ 1033
                                +  ++T+ HL    A+  +QPS    +   Y  L  K Q
Sbjct: 795  SQPATTAVPVKREKKKGAEEEGVKVTVMHLHFVAALSKIQPSVSAQQRRKYSSLRQKLQ 853



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 133/232 (57%), Gaps = 6/232 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG      +++E +  P  H E +   G +PP G+L+ GPPGC KT++A AV
Sbjct: 149 PATRLADLGGISNAIEKILELIAMPLCHPEIYAHTGVKPPRGVLLHGPPGCGKTMLAGAV 208

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ FL++  P + S   GESEK +R  F +A + AP I+F DEID +   R  E+ 
Sbjct: 209 AGELGVPFLSISAPSVVSGTSGESEKTIRDTFDEAASIAPCILFIDEIDAITPKR--ETA 266

Query: 890 GVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++QLL  LD L         V +I ATNRPD +D AL R GRFD  + +G P
Sbjct: 267 QREMERRIVAQLLTSLDDLSWEKTDGKPVMIIGATNRPDSLDSALRRAGRFDHEIVMGVP 326

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           +E  RE+I R+  +K+  S D + R LA  + G  GAD++ +   A I A++
Sbjct: 327 DEDGREQILRVLAQKLRLSGDFDFRALAKATPGYVGADLTALTSAAGIVAVK 378


>gi|348577661|ref|XP_003474602.1| PREDICTED: nuclear valosin-containing protein-like isoform 2 [Cavia
            porcellus]
          Length = 759

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 240/616 (38%), Positives = 337/616 (54%), Gaps = 81/616 (13%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V  PE+VS   GESEQ L ++F+ 
Sbjct: 201  LGIVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFEQ 260

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP +VFIDE+DAI P R+   +++ +R+VA LL+ MD    V     VLVI ATNR
Sbjct: 261  AVSSAPCIVFIDEIDAITPKREVASKDMERRIVAQLLSCMDDLNNVAAVAQVLVIGATNR 320

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P    R  IL  L   +    L  
Sbjct: 321  PDSLDPALRRAGRFDREICL--------------GIPDAPARERILQTLCRKLR---LPE 363

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
               +  +A  T GFVGADL ALC EAA+  + R   ++Q             E EG    
Sbjct: 364  TFNFCHLAHLTPGFVGADLMALCREAAVCAVNRALMRLQ------EQQRRDLEGEGGQRE 417

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
             L+    S    E  R                       L G + +     H+ +S+   
Sbjct: 418  TLETESTSETQDEFQR-----------------------LLGLLRD-----HDPLSE--- 446

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
                 E+   L +E+ DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+ 
Sbjct: 447  -----EQMQGLCIEMNDFIVALASVQPSAKREGFVTVPNVTWADIGALEDIREELTMAIL 501

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P ++ + FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGE
Sbjct: 502  APVRNPDRFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 561

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F +A+ +AP +IFFDE+D L   R  +  G SV  RV++QLL E+DGL  R 
Sbjct: 562  SERAVRQVFQRAKNSAPCVIFFDEMDALCPRRSDKETGASV--RVVNQLLTEMDGLEARQ 619

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNI 969
             V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+
Sbjct: 620  QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNL 679

Query: 970  RELAC-LSEGC-TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
              +A  L   C +GAD+S + REA++ A+ + +            +I+  H + A + V+
Sbjct: 680  EAIANDLRCDCYSGADLSALIREASLCALRQEMAREKYGNGKGELKISHTHFEEAFKKVK 739

Query: 1019 PSEIHSYKELSAKFQR 1034
            PS     +++    QR
Sbjct: 740  PSISVKDQKMYEALQR 755



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/302 (38%), Positives = 162/302 (53%), Gaps = 19/302 (6%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
            L+ VD E   +  + +  R + L+   VK+EDVGG     +EV   L+       +H E 
Sbjct: 143  LQEVDGEIEAVLQKKAKARGLELQTSSVKFEDVGGNDMTLKEVCQMLIH-----MRHPEV 197

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
            +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V  PE+ S   GESE+ +R L
Sbjct: 198  YHHLGIVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDL 257

Query: 861  FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 917
            F +A ++AP I+F DEID +   R  E     +  R+++QLL  +D L+       V VI
Sbjct: 258  FEQAVSSAPCIVFIDEIDAITPKR--EVASKDMERRIVAQLLSCMDDLNNVAAVAQVLVI 315

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
             ATNRPD +DPAL R GRFDR + +G P+   RE I +   RK+      N   LA L+ 
Sbjct: 316  GATNRPDSLDPALRRAGRFDREICLGIPDAPARERILQTLCRKLRLPETFNFCHLAHLTP 375

Query: 978  GCTGADISLICREAAISAIEENLDASRITMQH---LKTAIRHVQPSEIHSYKELSAKFQR 1034
            G  GAD+  +CREAA+ A+   L   R+  Q    L+      +  E  S  E   +FQR
Sbjct: 376  GFVGADLMALCREAAVCAVNRAL--MRLQEQQRRDLEGEGGQRETLETESTSETQDEFQR 433

Query: 1035 LV 1036
            L+
Sbjct: 434  LL 435



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/259 (38%), Positives = 141/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 468 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDRFKALGLVTPAGVLLAG 525

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 526 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 585

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 586 MDALCPRRSDKETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 645

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 646 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIANDLRCDCY 691

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL+AL  EA+L  LR+
Sbjct: 692 SGADLSALIREASLCALRQ 710


>gi|321250239|ref|XP_003191739.1| helicase [Cryptococcus gattii WM276]
 gi|317458206|gb|ADV19952.1| Helicase, putative [Cryptococcus gattii WM276]
          Length = 752

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 245/680 (36%), Positives = 355/680 (52%), Gaps = 94/680 (13%)

Query: 409  DISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
            D+  LGGL  +   L +I+  +     +    G+   KGVLLHG PG GKT L +  A +
Sbjct: 78   DLGSLGGLQPQITQLLEIVALALFHPEIYLHTGVPRPKGVLLHGVPGGGKTQLVKCLAGE 137

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
              +   +V+ P +VS   GESE+ L + FD A + AP ++F+DE+DAI P R++   E+ 
Sbjct: 138  MKLPFISVSAPSIVSGMSGESEKTLRDTFDEAKKIAPCILFLDEVDAITPKRENAQREME 197

Query: 528  QRMVATLLNLMDGVCRTD-GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +R+VA LL  MD +  ++  V++I ATNRPDS++PALRR GR D EIE+           
Sbjct: 198  RRIVAQLLTCMDDLAASEEPVIIIGATNRPDSLDPALRRAGRFDHEIEM----------- 246

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                VPS   R +IL  L S +  S  D +   L+ AT G++GADL AL  EA +  ++R
Sbjct: 247  ---GVPSQEGREQILKVLCSKLRLSG-DVDFRQLAKATPGYIGADLTALTTEAGVFAVKR 302

Query: 647  YSKIQTSSDVLHSTGTLFE------FEGHSDTMLQDSDCS-RNITESSRDCLDSASPCTS 699
                   + ++ +T    E        G    M+ D D    N+ E  +      +P   
Sbjct: 303  IFNRSIGNGLITNTSAGEEEIPEPDGAGIEAMMIDDRDTPFANLPEDVK-----KTPIAK 357

Query: 700  DL---PTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMK 756
             L   PT+L S  L                                + L   DF  A   
Sbjct: 358  FLMSHPTALTSDQL------------------------------STISLTPADFLAALKI 387

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            V+PSA RE    +P V W D+G   + + +L  A+  P +H E F  +G   P+G+L++G
Sbjct: 388  VQPSAKREGFATIPDVTWSDIGALSQTRDELHMAIVQPIRHPELFSVVGIDAPSGVLLWG 447

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGC KTL+A+AVA+E+  NF++VKGPEL +K+VGESE+AVR +FA+AR+++P +IFFDE
Sbjct: 448  PPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFARARSSSPCVIFFDE 507

Query: 877  IDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGR 935
            +D L   R    D +S S  RV++ LL ELDGL  R  V VI ATNRPD IDPA++RPGR
Sbjct: 508  LDALVPRR---DDSMSESSARVVNTLLTELDGLDARKAVYVIGATNRPDMIDPAMVRPGR 564

Query: 936  FDRLLYVGPPNETDREEIFRIHLRKIPCSSDV--NIRELACLS--EGCTGADISLICR-- 989
             D+LLYV  P+ ++R EI + H +K P + D   NI+E+      +G +GADI+ + R  
Sbjct: 565  LDKLLYVDLPSPSERFEILKTHTKKTPINEDSWGNIKEIVTSDKCDGFSGADIAALVREA 624

Query: 990  -------------------EAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA 1030
                               EA    +E   D+ ++T +H   A +   PS     +E   
Sbjct: 625  ATLALRAALESIGAFETPAEAEPEGVERKTDSVKVTAEHFARAAQKTLPS---VSREQRL 681

Query: 1031 KFQRLVHSNAEADESGYQLR 1050
            K++R+    A     G + R
Sbjct: 682  KYERMRDKYAGVPTRGRKQR 701



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 131/235 (55%), Gaps = 3/235 (1%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P +    +GG +   TQL+E V     H E +   G   P G+L+ G PG  KT + + +
Sbjct: 75   PDLDLGSLGGLQPQITQLLEIVALALFHPEIYLHTGVPRPKGVLLHGVPGGGKTQLVKCL 134

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E  L F++V  P + S   GESEK +R  F +A+  AP I+F DE+D +   R  E+ 
Sbjct: 135  AGEMKLPFISVSAPSIVSGMSGESEKTLRDTFDEAKKIAPCILFLDEVDAITPKR--ENA 192

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN-VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
               +  R+++QLL  +D L      V +I ATNRPD +DPAL R GRFD  + +G P++ 
Sbjct: 193  QREMERRIVAQLLTCMDDLAASEEPVIIIGATNRPDSLDPALRRAGRFDHEIEMGVPSQE 252

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
             RE+I ++   K+  S DV+ R+LA  + G  GAD++ +  EA + A++   + S
Sbjct: 253  GREQILKVLCSKLRLSGDVDFRQLAKATPGYIGADLTALTTEAGVFAVKRIFNRS 307


>gi|345802541|ref|XP_003434931.1| PREDICTED: nuclear VCP-like isoform 1 [Canis lupus familiaris]
          Length = 764

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 243/593 (40%), Positives = 326/593 (54%), Gaps = 68/593 (11%)

Query: 421  AILKDI---IISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNG 477
            A LK++   +I          LG  P +GVLLHGPPG GKT LA   A +  + +  V  
Sbjct: 180  ATLKEVCKMLIHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAA 239

Query: 478  PEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNL 537
             EVVS   GESEQ L E+F+ A  +AP V+FIDE+DAI P R+   +++ +R+VA LL  
Sbjct: 240  TEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTC 299

Query: 538  MDGVCRTDG---VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP 594
            MD +  T     VLVI ATNRPDS++PALRR GR DREI +               +P  
Sbjct: 300  MDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICL--------------GIPDE 345

Query: 595  AQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKIQT 652
            A R  IL  L   +   L ++    +L+  T GFVGADL ALC EAA+  + R    +Q 
Sbjct: 346  ASRERILQTLCRKLR--LPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQE 403

Query: 653  SSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPL 712
                    GTL    G  D         R  TE +     S +P        LL S  PL
Sbjct: 404  QQPTDPEMGTLPSKGGQED---------RVGTEPA-----SETPDELQWLLELLRSQDPL 449

Query: 713  RGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKV 772
                                     E+   L +E  DF  A   V+PSA RE  + VP V
Sbjct: 450  S-----------------------EEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPSV 486

Query: 773  KWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASE 832
             W D+G   +++ +L  A+  P +  E F+ +G   P G+L+ GPPGC KTL+A+AVA+E
Sbjct: 487  TWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANE 546

Query: 833  AGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS 892
            +GLNF++VKGPEL + +VGESE+AVR +F +AR++AP +IFFDE+D L   R     G S
Sbjct: 547  SGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGAS 606

Query: 893  VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
            V  RV++QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  
Sbjct: 607  V--RVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 664

Query: 953  IFRIHLR---KIPCSSDVNIRELAC-LSEGC-TGADISLICREAAISAIEENL 1000
            I +   +   + P  +DVN+  LA  L   C +GAD+S + REA+I A+ + +
Sbjct: 665  ILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEM 717



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 178/340 (52%), Gaps = 39/340 (11%)

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
            +D++ + + ++S  +  D   P  S    SLL S+   +G +    +     V ++ G  
Sbjct: 92   EDNEYTESYSDSDSNMEDYPDPQDSK-DASLLESNEKRKGRLRSKGNKRKKDVQEADG-- 148

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEA 790
                     ++E V  +KA+ K        + L+V +VK+EDVGG     +EV   L+  
Sbjct: 149  ---------EIEGVLHKKAKAK-------GLELQVSRVKFEDVGGNDATLKEVCKMLIH- 191

Query: 791  VEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWV 850
                 +H E +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V   E+ S   
Sbjct: 192  ----MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVS 247

Query: 851  GESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ 910
            GESE+ +R LF +A +NAP ++F DEID +   R  E     +  R+++QLL  +D L+ 
Sbjct: 248  GESEQKLRELFEQAVSNAPCVLFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNT 305

Query: 911  ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDV 967
                  V VI ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      
Sbjct: 306  TAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPETF 365

Query: 968  NIRELACLSEGCTGADISLICREAAISAIEENLDASRITM 1007
              R LA L+ G  GAD+  +CREAA+ A+      SR+ M
Sbjct: 366  PFRHLAHLTPGFVGADLMALCREAAMCAV------SRVLM 399



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/259 (38%), Positives = 142/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V +    DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 473 PSAKREGFVTVPSVTWADIGALEDIREELTMA--ILAPVRSPEQFRALGLMTPAGVLLAG 530

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 531 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDE 590

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 591 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 650

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 651 TLFV--------------GLPPPADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCY 696

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL+AL  EA++  LR+
Sbjct: 697 SGADLSALVREASICALRQ 715


>gi|431902389|gb|ELK08889.1| Apoptosis-stimulating of p53 protein 2 [Pteropus alecto]
          Length = 2010

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 242/619 (39%), Positives = 332/619 (53%), Gaps = 79/619 (12%)

Query: 397  IEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
            +EFQ+     E     +GG       +  ++I          LG+ P +GVLLHGPPG G
Sbjct: 254  LEFQSSSVKFED----VGGNDTTLKEVCKMLIHMRHPEVYQHLGVIPPRGVLLHGPPGCG 309

Query: 457  KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
            KT LA   A +  + +  V   E+VS   GESEQ L E+F+ A  +AP ++FIDE+DAI 
Sbjct: 310  KTLLAHAVAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSNAPCILFIDEIDAIT 369

Query: 517  PARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREI 573
            P R+   +++ +R+VA LL  MD    V  T  VLVI ATNRPDS++PALRR GR DREI
Sbjct: 370  PKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREI 429

Query: 574  EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
             +               +P  A R  IL  L   +          +L+  T GFVGADL 
Sbjct: 430  CL--------------GIPDEASRERILQTLCRKLRLPAT-FHFRHLAHLTPGFVGADLM 474

Query: 634  ALCNEAA-------LVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITES 686
            ALC EAA       L+ LR   +    ++ L S G             Q+       T  
Sbjct: 475  ALCREAAMCAVNRVLMTLREQQRKDPETEGLPSEGN------------QEERIGTEPTSK 522

Query: 687  SRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLE 746
            ++D L S           LL +  PL                         E+   L +E
Sbjct: 523  TQDELQSL--------LRLLRNQDPLS-----------------------EEQLQGLCIE 551

Query: 747  LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
            L DF  A   V+PSA RE  + VP V W DVG   +++ +L  A+  P ++ + F+ +G 
Sbjct: 552  LNDFIVALSSVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPVRNPDQFQALGL 611

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
              P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE+AVR +F +A+ 
Sbjct: 612  VTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKN 671

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
            +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V ++AATNRPD I
Sbjct: 672  SAPCVIFFDEVDALCPRRSDREIGTSV--RVVNQLLTEMDGLETRQQVFIMAATNRPDII 729

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELAC-LSEGC-TG 981
            DPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+  +A  L   C +G
Sbjct: 730  DPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYSG 789

Query: 982  ADISLICREAAISAIEENL 1000
            AD+S + REA+I A+ + +
Sbjct: 790  ADLSALVREASICALRQEM 808



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      D+  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 564 PSAKREGFVTVPNVTWADVGALEDIREELTMA--ILAPVRNPDQFQALGLVTPAGVLLAG 621

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 622 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 681

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 682 VDALCPRRSDREIGTSVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 741

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 742 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 787

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 788 SGADLSALVREASICALRQEMARQKSGN 815


>gi|260830274|ref|XP_002610086.1| hypothetical protein BRAFLDRAFT_125661 [Branchiostoma floridae]
 gi|229295449|gb|EEN66096.1| hypothetical protein BRAFLDRAFT_125661 [Branchiostoma floridae]
          Length = 854

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 242/622 (38%), Positives = 344/622 (55%), Gaps = 93/622 (14%)

Query: 438  SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
            +LG+ P +G LLHGPPG GKT LA   A +  + L  +   E+VS   GESE+ + ++F+
Sbjct: 267  TLGVTPPRGFLLHGPPGCGKTLLANAIAGELELPLLKIAATEIVSGVSGESEEKVRDLFE 326

Query: 498  SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCR--TDGVLVIAATNR 555
             A   AP ++FIDE+DAI P R+    E+ +R+VA LL  MD +    +  VLVI ATNR
Sbjct: 327  KAVACAPCILFIDEIDAITPKRETAQREMERRIVAQLLTCMDDLSANISAHVLVIGATNR 386

Query: 556  PDSIEPALRRPGRLDREIEIDM--------SFLFSLLKNSPAAVPSPAQRLEILHALLSG 607
            PD ++PALRR GR DREI + +        +  FS      A++P P   + IL  L   
Sbjct: 387  PDFLDPALRRAGRFDREISMGIPDERARAGAEAFS----DRASMPLPC--VSILQVLCQK 440

Query: 608  MEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFE 665
            +    L     Y  +A  T G+VGADL+ALC EAA+  + R                L E
Sbjct: 441  LR---LSDGFSYRQLAHLTPGYVGADLSALCREAAMTAINRI---------------LTE 482

Query: 666  FEGHSDTMLQDSDCSRNITESSRDCLD-SASPCTSDL----PTSLLSSSLPLRGTVSEIA 720
             E          +  R  TE +  C D S +P +  L    P S +S    L+       
Sbjct: 483  RE---------EETRRKNTEQTVTCADVSVAPDSGTLSMEAPDSRISVLSWLKDQPPLTQ 533

Query: 721  DNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ 780
            +   N                 L +++ DF+ A   ++PSA RE    +P V W+DVG  
Sbjct: 534  EQLQN-----------------LSIQMEDFQVALTTMQPSAKREGFATIPDVTWDDVGAL 576

Query: 781  REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAV 840
            ++++ +L  A+  P KH+E F+ +G   P G+L+ GPPGC KTL+A+A+A+E+G+NF++V
Sbjct: 577  QDIREELTMAILAPVKHREKFESLGLVNPPGVLLAGPPGCGKTLLAKAIANESGVNFISV 636

Query: 841  KGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR---GKESDGVSVSDRV 897
            KGPEL + +VGESE+AVR +F +AR +AP +IFFDE+D L   R   G+ S  V    RV
Sbjct: 637  KGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDELDALCPRRSSAGESSGAV----RV 692

Query: 898  MSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIH 957
            ++QLL E+DGL  R  V ++ ATNRPD IDPA+LRPGR D+LL+VG P+E DRE I    
Sbjct: 693  VNQLLTEMDGLEARKQVFIMGATNRPDIIDPAVLRPGRMDKLLFVGLPSEVDREAILNTI 752

Query: 958  LR---KIPCSSDVNIRELACLSE--GCTGADISLICREAAISAIEENL----DAS----- 1003
             +   K P   DV +  +A  ++    TGAD++ + REAA+SA+ E++     AS     
Sbjct: 753  TKRGTKPPIDEDVCLASIARNAQCNNFTGADLAALVREAAMSALRESVVHPGTASGTDFI 812

Query: 1004 -----RITMQHLKTAIRHVQPS 1020
                 RI +QH   A + V+PS
Sbjct: 813  SPGQIRINLQHFNKAFQKVRPS 834



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 140/245 (57%), Gaps = 25/245 (10%)

Query: 772 VKWEDVGGQREVKTQLMEAVEW--PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           VK+ D+GG   +++ L E  +     +H E ++ +G  PP G L+ GPPGC KTL+A A+
Sbjct: 237 VKFADIGG---IESCLQEVCKLLVHLRHPEVYQTLGVTPPRGFLLHGPPGCGKTLLANAI 293

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  L  L +   E+ S   GESE+ VR LF KA A AP I+F DEID +   R  E+ 
Sbjct: 294 AGELELPLLKIAATEIVSGVSGESEEKVRDLFEKAVACAPCILFIDEIDAITPKR--ETA 351

Query: 890 GVSVSDRVMSQLLVELDGLHQRV--NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              +  R+++QLL  +D L   +  +V VI ATNRPD +DPAL R GRFDR + +G P+E
Sbjct: 352 QREMERRIVAQLLTCMDDLSANISAHVLVIGATNRPDFLDPALRRAGRFDREISMGIPDE 411

Query: 948 TDRE----------------EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREA 991
             R                  I ++  +K+  S   + R+LA L+ G  GAD+S +CREA
Sbjct: 412 RARAGAEAFSDRASMPLPCVSILQVLCQKLRLSDGFSYRQLAHLTPGYVGADLSALCREA 471

Query: 992 AISAI 996
           A++AI
Sbjct: 472 AMTAI 476



 Score =  159 bits (402), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/259 (39%), Positives = 139/259 (53%), Gaps = 22/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  +      D+  L  + +E  +   I+     +    SLGL    GVLL G
Sbjct: 555 PSAKREGFATIPDVTWDDVGALQDIREELTMA--ILAPVKHREKFESLGLVNPPGVLLAG 612

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SGVN  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 613 PPGCGKTLLAKAIANESGVNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDE 672

Query: 512 LDAIAPARKDGGEELSQ-RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLD 570
           LDA+ P R   GE     R+V  LL  MDG+     V ++ ATNRPD I+PA+ RPGR+D
Sbjct: 673 LDALCPRRSSAGESSGAVRVVNQLLTEMDGLEARKQVFIMGATNRPDIIDPAVLRPGRMD 732

Query: 571 REIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHG---- 626
           +        LF         +PS   R  IL+ +        +D +V   S+A +     
Sbjct: 733 K-------LLF-------VGLPSEVDREAILNTITKRGTKPPIDEDVCLASIARNAQCNN 778

Query: 627 FVGADLAALCNEAALVCLR 645
           F GADLAAL  EAA+  LR
Sbjct: 779 FTGADLAALVREAAMSALR 797


>gi|344230035|gb|EGV61920.1| hypothetical protein CANTEDRAFT_107330 [Candida tenuis ATCC 10573]
          Length = 835

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/612 (37%), Positives = 347/612 (56%), Gaps = 69/612 (11%)

Query: 409 DISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           ++S+LGG+ K    L ++I    +   +  S G+ P +GVLL+GPPG GKT++A   A +
Sbjct: 192 NLSQLGGMEKVTTQLMELIGLPILHPEIYLSTGVEPPRGVLLYGPPGCGKTTVANALAGE 251

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG--EE 525
             V   +++ P VVS   GESE+ L E+F+ A   AP +VFIDE+D+I P R DGG   E
Sbjct: 252 LQVPFISISAPSVVSGMSGESEKKLREIFEDAKNIAPCLVFIDEIDSITPKR-DGGAQRE 310

Query: 526 LSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
           + +R+VA LL LMD +   +T+G  V+VI ATNRPDS++PALRR GR DREI ++     
Sbjct: 311 MERRIVAQLLTLMDELTLDKTNGKPVIVIGATNRPDSLDPALRRAGRFDREICLN----- 365

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
                    VPS  QR+ IL A+ S ++ +L     + L+  T GFVGADL +L   + +
Sbjct: 366 ---------VPSEEQRISILKAMTSTLKLNLEGFNFKVLAKLTSGFVGADLKSLVTASGV 416

Query: 642 VCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDL 701
             ++R  +            TL E +   + M   S     +  +S +     +P     
Sbjct: 417 FAIKRIFE------------TLSEQQELEELMKNGS-----LDNNSMEVDQKVTPAV--- 456

Query: 702 PTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMS-----------EKGCALKLELVDF 750
            TS +S+S        E+ + F N   D    +              E+   L +   DF
Sbjct: 457 -TSAVSNS-------KELVETFENKSDDEKLSIIQKFLISHPSPLTEEQLQPLSISFDDF 508

Query: 751 EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
             A   V+P+A RE    +P V W+ VG   +++ +L   +  P K  E F+++G   P 
Sbjct: 509 MNALPSVQPTAKREGFATIPDVTWDHVGALTKIRMELHMCIVQPIKKPEIFEKVGITAPA 568

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           G+LM+GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F +ARA+ P 
Sbjct: 569 GVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFQRARASVPC 628

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
           IIFFDE+D L   R  ++     S RV++ LL ELDGL+ R  + VI ATNRPD IDPA+
Sbjct: 629 IIFFDELDALVPRR--DASLSESSSRVVNTLLTELDGLNDRKGIFVIGATNRPDMIDPAM 686

Query: 931 LRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELACLSEGC---TGADIS 985
           +RPGR D+ LY+  P E +R +I +  ++    P    VN++++   ++ C   +GAD+S
Sbjct: 687 IRPGRLDKSLYIELPTEEERLDILKTLIKSNGTPIDESVNLKDI-VYNQKCRNFSGADLS 745

Query: 986 LICREAAISAIE 997
            + REA + A++
Sbjct: 746 SLVREAGVIALK 757



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 167/326 (51%), Gaps = 53/326 (16%)

Query: 328 LSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSL 387
           LS I  FL+      P+ LT E+ QP ++ S D   NA            P +   +K  
Sbjct: 479 LSIIQKFLI----SHPSPLTEEQLQP-LSISFDDFMNAL-----------PSVQPTAK-- 520

Query: 388 REG--TLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPT 444
           REG  T+P+   +              +G L+K    L   I+    K      +G+   
Sbjct: 521 REGFATIPDVTWDH-------------VGALTKIRMELHMCIVQPIKKPEIFEKVGITAP 567

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
            GVL+ GPPG GKT LA+  A++S  N  ++ GPE++++  GESE+A+ +VF  A  S P
Sbjct: 568 AGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFQRARASVP 627

Query: 505 AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
            ++F DELDA+ P R     E S R+V TLL  +DG+    G+ VI ATNRPD I+PA+ 
Sbjct: 628 CIIFFDELDALVPRRDASLSESSSRVVNTLLTELDGLNDRKGIFVIGATNRPDMIDPAMI 687

Query: 565 RPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSG----MEHSLLDSEVEYL 620
           RPGRLD+ + I++              P+  +RL+IL  L+      ++ S+   ++ Y 
Sbjct: 688 RPGRLDKSLYIEL--------------PTEEERLDILKTLIKSNGTPIDESVNLKDIVY- 732

Query: 621 SMATHGFVGADLAALCNEAALVCLRR 646
           +     F GADL++L  EA ++ L+R
Sbjct: 733 NQKCRNFSGADLSSLVREAGVIALKR 758



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/236 (37%), Positives = 132/236 (55%), Gaps = 12/236 (5%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P +    +GG  +V TQLME +  P  H E +   G  PP G+L++GPPGC KT +A A+
Sbjct: 189 PDINLSQLGGMEKVTTQLMELIGLPILHPEIYLSTGVEPPRGVLLYGPPGCGKTTVANAL 248

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  + F+++  P + S   GESEK +R +F  A+  AP ++F DEID +   R    D
Sbjct: 249 AGELQVPFISISAPSVVSGMSGESEKKLREIFEDAKNIAPCLVFIDEIDSITPKR----D 304

Query: 890 GVS---VSDRVMSQLLVELDGLH-QRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYV 942
           G +   +  R+++QLL  +D L   + N   V VI ATNRPD +DPAL R GRFDR + +
Sbjct: 305 GGAQREMERRIVAQLLTLMDELTLDKTNGKPVIVIGATNRPDSLDPALRRAGRFDREICL 364

Query: 943 GPPNETDREEIFRIHLRKIPCSSD-VNIRELACLSEGCTGADISLICREAAISAIE 997
             P+E  R  I +     +  + +  N + LA L+ G  GAD+  +   + + AI+
Sbjct: 365 NVPSEEQRISILKAMTSTLKLNLEGFNFKVLAKLTSGFVGADLKSLVTASGVFAIK 420


>gi|156717934|ref|NP_001096509.1| nuclear VCP-like [Xenopus (Silurana) tropicalis]
 gi|138519795|gb|AAI35412.1| LOC100125138 protein [Xenopus (Silurana) tropicalis]
          Length = 852

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 238/604 (39%), Positives = 330/604 (54%), Gaps = 78/604 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +G LLHGPPG GKT LA+  A +  + +  V   E+VS   GESEQ L E+F+ 
Sbjct: 287  LGVVPPRGFLLHGPPGCGKTLLAQAIAGELDLPMLKVAATEMVSGVSGESEQKLRELFEQ 346

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP ++FIDE+DAI P R+   +++ +R+VA LL  MD    +  T  VLVI ATNR
Sbjct: 347  AVSSAPCILFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNSLAVTAQVLVIGATNR 406

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P    R  IL  L   ++   L  
Sbjct: 407  PDSLDPALRRAGRFDREICL--------------GIPDEGARKRILQTLCRKLK---LPE 449

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
              +Y  +A  T G+VGADL ALC EAA+  + R   IQ           + E     + +
Sbjct: 450  PFDYCRLAHLTPGYVGADLMALCREAAMCAVNRVL-IQLKEQQATPEAAVEETAPQPEAL 508

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPT--SLLSSSLPLRGTVSEIADNFHNGVSDSS 731
               ++              +  P  S+L    +LL    PL                   
Sbjct: 509  ALQAE------------KQTTGPAQSELHRLLALLQEHTPL------------------- 537

Query: 732  GGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
                  E+  +L +E+ DF  A   V+PSA RE    VP V W D+G   E++ +L  A+
Sbjct: 538  ----PEEELQSLCIEMDDFLGALPSVQPSAKREGFATVPDVTWADIGALEEIREELTMAI 593

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P K+ E FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 594  LAPVKNPEQFKALGLMAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 653

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A  ++P +IFFDEID L   R     G SV  RV++QLL E+DGL  R
Sbjct: 654  ESERAVRQVFQRASNSSPCVIFFDEIDALCPRRSGYESGASV--RVVNQLLTEMDGLESR 711

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ LYVG P   DR  I +   +   + P  +DV+
Sbjct: 712  RQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPADRLAILKTITKDGTRPPLEADVD 771

Query: 969  IRELACLSEGC---TGADISLICREAAISAIEE---------NLDASRITMQHLKTAIRH 1016
            +  +A   E C   TGAD+S + REA++SA+ +         N    +++ +H + A   
Sbjct: 772  LEAIAG-DECCDCFTGADLSALVREASVSALRQEMLGLEPPTNRGQIKVSRRHFEEAFSK 830

Query: 1017 VQPS 1020
            V+PS
Sbjct: 831  VKPS 834



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 136/232 (58%), Gaps = 6/232 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V++ED+GG  +   ++ + +    +H E ++ +G  PP G L+ GPPGC KTL+A+A+A 
Sbjct: 256  VRFEDIGGNEDTLKEVCKMM-IHMRHPEVYQHLGVVPPRGFLLHGPPGCGKTLLAQAIAG 314

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E  L  L V   E+ S   GESE+ +R LF +A ++AP I+F DEID +   R  E    
Sbjct: 315  ELDLPMLKVAATEMVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKR--EVASK 372

Query: 892  SVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR + +G P+E 
Sbjct: 373  DMERRIVAQLLTCMDDLNSLAVTAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEG 432

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             R+ I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+   L
Sbjct: 433  ARKRILQTLCRKLKLPEPFDYCRLAHLTPGYVGADLMALCREAAMCAVNRVL 484



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 142/266 (53%), Gaps = 25/266 (9%)

Query: 390 GTLPNAQIE-----FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPT 444
           G LP+ Q       F  V      DI  L  + +E  +   I+          +LGL   
Sbjct: 554 GALPSVQPSAKREGFATVPDVTWADIGALEEIREELTMA--ILAPVKNPEQFKALGLMAP 611

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
            GVLL GPPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  AS S+P
Sbjct: 612 AGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRASNSSP 671

Query: 505 AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
            V+F DE+DA+ P R       S R+V  LL  MDG+     V ++AATNRPD I+PA+ 
Sbjct: 672 CVIFFDEIDALCPRRSGYESGASVRVVNQLLTEMDGLESRRQVFIMAATNRPDIIDPAIL 731

Query: 565 RPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA- 623
           RPGRLD+ + +               +P PA RL IL  +        L+++V+  ++A 
Sbjct: 732 RPGRLDKTLYV--------------GLPPPADRLAILKTITKDGTRPPLEADVDLEAIAG 777

Query: 624 ---THGFVGADLAALCNEAALVCLRR 646
                 F GADL+AL  EA++  LR+
Sbjct: 778 DECCDCFTGADLSALVREASVSALRQ 803


>gi|210076057|ref|XP_505704.2| YALI0F21329p [Yarrowia lipolytica]
 gi|199424971|emb|CAG78513.2| YALI0F21329p [Yarrowia lipolytica CLIB122]
          Length = 845

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 248/677 (36%), Positives = 367/677 (54%), Gaps = 62/677 (9%)

Query: 400  QNVQATVEQDIS--KLGGLSKEY-AILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
            Q V+   E  IS   LGG+ K    I K +++  +      + GL   +GVLLHGPPG G
Sbjct: 195  QKVEHKSELSISLEDLGGIEKVIEQITKSVLVPLTHPEVYKTTGLTMPRGVLLHGPPGCG 254

Query: 457  KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
            KT LA   A+ + V   +++ P VVS   GESE+ + E+F+ A   AP ++FIDE+DA+ 
Sbjct: 255  KTVLANAIANKAQVPFMSISAPSVVSGMSGESEKKIREIFEEARAIAPCLLFIDEIDAVT 314

Query: 517  PARKDGGEELSQRMVATLLNLMDGVCRTDG----VLVIAATNRPDSIEPALRRPGRLDRE 572
            P R+ GG  +  R+VA LL  +D +         V+V+ ATNRPD+I+PALRRPGR D E
Sbjct: 315  PKREGGGRGMETRIVAQLLTCIDDLNPEKNDFRPVIVLGATNRPDAIDPALRRPGRFDEE 374

Query: 573  IEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADL 632
            I +              AVP    R  IL A+   ++ +  D + E L+M T G+V ADL
Sbjct: 375  IAM--------------AVPDRKSRELILKAITRPLKLND-DIDFELLAMRTPGYVAADL 419

Query: 633  AALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDTM-LQDSDCSRNITESSRDC 690
             AL   A  + L R + ++  + +    T    E    +D+M ++ +      TE+ +  
Sbjct: 420  KALVTAAGSMALERAFKQLVENKEAGQETSDKIEEIKDTDSMDVEGAPQDGQPTEAVKTE 479

Query: 691  LDSAS-----------PCTSDLPTSLLSSSLPLRGTV-SEIADNFHNGVSDSSGGMFMSE 738
             DS S           P  +  PT++++   P   +V  +    F N ++ S     +  
Sbjct: 480  TDSISAGDVKEEPVETPVETPKPTTVITLPNPPHTSVWVDFLRMFPNPLTASQLQNMV-- 537

Query: 739  KGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQ 798
                  + L DF  A   ++PS+ RE    VP V WEDVG   +V+ +L  A+  P +  
Sbjct: 538  ------IALNDFLMAIPLIQPSSKREGFATVPDVSWEDVGALAQVRQELHMAIVQPIRQP 591

Query: 799  EAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVR 858
            + FK +G   P G+L++GPPGC KTL+A+AVASE   NF++V+GPEL +K+VGESE+A+R
Sbjct: 592  DLFKMVGVDAPGGVLLWGPPGCGKTLLAKAVASETAANFISVRGPELLNKYVGESERAIR 651

Query: 859  SLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIA 918
             +F +A  ++P IIFFDE D LA  R  +  G   S R+++ LL EL+GL +R  V VIA
Sbjct: 652  QVFERAALSSPCIIFFDEFDSLAPRR--DDGGSEHSSRLVNTLLTELNGLTERRGVYVIA 709

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE- 977
            ATNRPD IDPA++RPGR D+ L+VG P+E +R EI     RK P ++DVN+R +   S  
Sbjct: 710  ATNRPDIIDPAMVRPGRLDKTLFVGLPDENERFEILSKVCRKRPLAADVNLRNIVADSRC 769

Query: 978  -GCTGADISLICREAAISAIEENL--DASRITMQHLKTAIRHVQPSEI----HSYKELSA 1030
               +GAD++ +  EA + A+ + +    + I   H     +   PS I    H ++E   
Sbjct: 770  GNYSGADLTQLANEAGLMALRQQVFTHGAEIIHDH-----KAAPPSSIEITNHHFEE--- 821

Query: 1031 KFQRLVHSNAEADESGY 1047
             F ++  S  +AD   Y
Sbjct: 822  AFNKIRPSVTDADRLKY 838



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/267 (37%), Positives = 144/267 (53%), Gaps = 35/267 (13%)

Query: 386 SLREG--TLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRP 443
           S REG  T+P+   E     A V Q++          AI++ I            +G+  
Sbjct: 554 SKREGFATVPDVSWEDVGALAQVRQEL--------HMAIVQPI----RQPDLFKMVGVDA 601

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
             GVLL GPPG GKT LA+  A ++  N  +V GPE++++  GESE+A+ +VF+ A+ S+
Sbjct: 602 PGGVLLWGPPGCGKTLLAKAVASETAANFISVRGPELLNKYVGESERAIRQVFERAALSS 661

Query: 504 PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPAL 563
           P ++F DE D++AP R DGG E S R+V TLL  ++G+    GV VIAATNRPD I+PA+
Sbjct: 662 PCIIFFDEFDSLAPRRDDGGSEHSSRLVNTLLTELNGLTERRGVYVIAATNRPDIIDPAM 721

Query: 564 RRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA 623
            RPGRLD+ + +               +P   +R EIL  +        L ++V   ++ 
Sbjct: 722 VRPGRLDKTLFV--------------GLPDENERFEILSKVC---RKRPLAADVNLRNIV 764

Query: 624 TH----GFVGADLAALCNEAALVCLRR 646
                  + GADL  L NEA L+ LR+
Sbjct: 765 ADSRCGNYSGADLTQLANEAGLMALRQ 791


>gi|308813299|ref|XP_003083956.1| 26S proteasome regulatory complex, ATPase RPT1 (ISS) [Ostreococcus
            tauri]
 gi|116055838|emb|CAL57923.1| 26S proteasome regulatory complex, ATPase RPT1 (ISS) [Ostreococcus
            tauri]
          Length = 930

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 244/631 (38%), Positives = 347/631 (54%), Gaps = 84/631 (13%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLSS-LGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGG+      +K++I+   +   L + LG+ P +GVLLHGPPG GKT+LA   A ++
Sbjct: 302  LSDLGGIEDSLHAIKELILCPLMHPELYAWLGVDPPRGVLLHGPPGCGKTTLAHAIAQEA 361

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
             V  F++   E+VS   GESE  + E+F +A  +AP+++FIDE+DAI P R+    E+ +
Sbjct: 362  RVPFFSIAATEIVSGMSGESEAKIRELFLTARANAPSLIFIDEIDAIVPKRESAQREMER 421

Query: 529  RMVATLLNLMDGV---------------CRTDGVLVIAATNRPDSIEPALRRPGRLDREI 573
            R+VA LL  MD +               CR   V VI ATNRPD ++ ALRR GR DREI
Sbjct: 422  RIVAQLLASMDELQSNIDATDEVDRIARCRRH-VCVIGATNRPDGMDAALRRAGRFDREI 480

Query: 574  EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
             +               +P  A R  IL    + +  S  D ++  ++  T G+VGADL+
Sbjct: 481  ML--------------GIPDEAARERILRVQATKLRLSG-DLDLREIAKKTPGYVGADLS 525

Query: 634  ALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDS 693
            AL  EAA   + R  +             L + E   D  + D      +   +R     
Sbjct: 526  ALAKEAAASAVTRIFR------------KLEDKEEGKDEAMTDISTGPTVGGDAR----- 568

Query: 694  ASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKA 753
                   L T  L+   PL  T  E+ D                     L + + DF  A
Sbjct: 569  -------LATGRLADPRPL--TEDELGD---------------------LAITMDDFSLA 598

Query: 754  RMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGIL 813
              +V+PSA RE     P V W+DVG   EV+ +L  ++  P  H E F+ +G    TG+L
Sbjct: 599  LTRVQPSAQREGFTTTPNVTWDDVGSLTEVREELKFSIAEPIAHPERFQAMGLNISTGVL 658

Query: 814  MFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIF 873
            ++GPPGC KTL+A+A A+EA  NF+++KGPEL +K+VGESE+AVR+LF +AR+ +P ++F
Sbjct: 659  LYGPPGCGKTLVAKATANEAMANFISIKGPELLNKYVGESERAVRTLFQRARSASPCVLF 718

Query: 874  FDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRP 933
            FDE+D LA  RG   D  S ++RV++QLL E+DGL  R    +IAATNRPD IDPA+LRP
Sbjct: 719  FDEMDSLAPRRGSGGDNTS-AERVVNQLLTEMDGLEARNATFLIAATNRPDMIDPAMLRP 777

Query: 934  GRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS--EGCTGADISLICREA 991
            GR D+LLYV  P    R  I +   RK P ++DVNI  +A     EG +GAD++ + REA
Sbjct: 778  GRLDKLLYVPLPPPDGRAAILKTLTRKTPIANDVNIDAIALSHSCEGFSGADLASLVREA 837

Query: 992  AISAIE-ENLDAS-RITMQHLKTAIRHVQPS 1020
             ++A++   +DA+ R+T  H + A   VQPS
Sbjct: 838  CVAALKMMTIDATPRVTAAHFEEAFTKVQPS 868



 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 128/226 (56%), Gaps = 16/226 (7%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V+  D+GG  +    + E +  P  H E +  +G  PP G+L+ GPPGC KT +A A+A 
Sbjct: 300 VRLSDLGGIEDSLHAIKELILCPLMHPELYAWLGVDPPRGVLLHGPPGCGKTTLAHAIAQ 359

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EA + F ++   E+ S   GESE  +R LF  ARANAPS+IF DEID +   R  ES   
Sbjct: 360 EARVPFFSIAATEIVSGMSGESEAKIRELFLTARANAPSLIFIDEIDAIVPKR--ESAQR 417

Query: 892 SVSDRVMSQLLVELDGLHQRVNVT--------------VIAATNRPDKIDPALLRPGRFD 937
            +  R+++QLL  +D L   ++ T              VI ATNRPD +D AL R GRFD
Sbjct: 418 EMERRIVAQLLASMDELQSNIDATDEVDRIARCRRHVCVIGATNRPDGMDAALRRAGRFD 477

Query: 938 RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
           R + +G P+E  RE I R+   K+  S D+++RE+A  + G  GAD
Sbjct: 478 REIMLGIPDEAARERILRVQATKLRLSGDLDLREIAKKTPGYVGAD 523


>gi|440299581|gb|ELP92133.1| atpase AAA family protein, partial [Entamoeba invadens IP1]
          Length = 590

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/593 (37%), Positives = 339/593 (57%), Gaps = 72/593 (12%)

Query: 412 KLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           K+GG+ K    +++++    +   +   +G+ P +G+LLHGPPG GKT LA   A + GV
Sbjct: 12  KIGGIDKIITEIRELVEYPLLHPEIYKHVGIDPPRGILLHGPPGCGKTLLAEAIAGEVGV 71

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM 530
               V+  E+V    GESEQ + ++FD A++ AP+++FIDE+D+I   R +   E+ +R+
Sbjct: 72  PFIEVSATELVGGVSGESEQKIRDLFDDAAKLAPSLLFIDEIDSIVQKRDNSQREMEKRI 131

Query: 531 VATLLNLMDGVCRTDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           VA LL+ MD +   D  V+VI ATNRPDS++PALRR GR D+EI +              
Sbjct: 132 VAQLLSSMDKLSTADKPVMVIGATNRPDSLDPALRRAGRFDKEIAL-------------- 177

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
            +PS  QR +I+  ++  ++ +  D ++  L+ +T G+VGAD+AAL  EAA+  + R   
Sbjct: 178 GIPSEEQRRQIVTKMIENLKIAE-DVQILPLAKSTAGYVGADIAALTKEAAVHAVHRVFN 236

Query: 650 IQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSS 709
            +  S+ + S                + + +  I +    C              L    
Sbjct: 237 SKVGSESVKSPTP-------------NPNLADGIEQRQAVC------------DYLKEHK 271

Query: 710 LPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
            PL  +V+E+A                      L ++  DFE A   V+PSA+RE    +
Sbjct: 272 EPL--SVTELAQ---------------------LNIKQDDFEYALTVVQPSALREGFTTI 308

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P V W+ +GG   V  +L+  V    ++ E +K+ G   P GIL++GPPGC KT  A+A+
Sbjct: 309 PDVTWDSIGGMENVHDELIRLVVGAVQYPELYKKFGIYTPAGILLYGPPGCGKTFCAKAL 368

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A+E   NF+AVKGP+L +K+VGE+E+AVR LF +A+ +AP +IFFDE+D LA  R ++S 
Sbjct: 369 ANECKANFIAVKGPQLLNKYVGEAERAVRQLFERAKNSAPCVIFFDELDALAPKRSEDSS 428

Query: 890 GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
           GVS   R+++QLL ELDG+  R +V V+AATNRPD IDPA+LRPGR DRL+ V  PNE  
Sbjct: 429 GVS---RIVNQLLTELDGMDVRKDVFVVAATNRPDCIDPAMLRPGRLDRLISVELPNENA 485

Query: 950 REEIFRIHLR--KIPCSSDVNIRELA--CLSEGCTGADISLICREAAISAIEE 998
           R +I +   R  K+P   D+N+  +A     EG +GAD++ + +EA++ A+ +
Sbjct: 486 RVDILKTICRRQKVPLEKDINLETIARDKKVEGFSGADLAALVKEASVRALND 538



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 137/224 (61%), Gaps = 3/224 (1%)

Query: 774 WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
           ++ +GG  ++ T++ E VE+P  H E +K +G  PP GIL+ GPPGC KTL+A A+A E 
Sbjct: 10  FDKIGGIDKIITEIRELVEYPLLHPEIYKHVGIDPPRGILLHGPPGCGKTLLAEAIAGEV 69

Query: 834 GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
           G+ F+ V   EL     GESE+ +R LF  A   APS++F DEID +  ++ +++    +
Sbjct: 70  GVPFIEVSATELVGGVSGESEQKIRDLFDDAAKLAPSLLFIDEIDSI--VQKRDNSQREM 127

Query: 894 SDRVMSQLLVELDGLHQRVN-VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
             R+++QLL  +D L      V VI ATNRPD +DPAL R GRFD+ + +G P+E  R +
Sbjct: 128 EKRIVAQLLSSMDKLSTADKPVMVIGATNRPDSLDPALRRAGRFDKEIALGIPSEEQRRQ 187

Query: 953 IFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           I    +  +  + DV I  LA  + G  GADI+ + +EAA+ A+
Sbjct: 188 IVTKMIENLKIAEDVQILPLAKSTAGYVGADIAALTKEAAVHAV 231


>gi|320580148|gb|EFW94371.1| Putative ATPase of the AAA family [Ogataea parapolymorpha DL-1]
          Length = 809

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 241/608 (39%), Positives = 344/608 (56%), Gaps = 64/608 (10%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S+LGGL    + L +++    +   +  + G+ P +GVLLHGPPG GKT++A   A + 
Sbjct: 184  LSQLGGLDDVVSQLMEVVGMPVLHPEIYMATGIEPPRGVLLHGPPGCGKTTIAYALAGEL 243

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG--EEL 526
             V   +++ P VVS   GESE+ + E+FD A Q AP +VF DE+DAI P R DGG   E+
Sbjct: 244  QVPFISISAPSVVSGMSGESEKKVREIFDEAKQLAPCLVFFDEIDAITPKR-DGGAQREM 302

Query: 527  SQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
             +R+VA LL  MD +   +TDG  V++I ATNRPDS++ ALRR GR DREI I+      
Sbjct: 303  ERRIVAQLLTSMDELSLDKTDGKPVIIIGATNRPDSLDTALRRAGRFDREICIN------ 356

Query: 583  LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAA 640
                    VP+   R +IL +++  +  S    E++ LS+A  T GFVGADL AL   A 
Sbjct: 357  --------VPNEHARFKILESMVKNLRIS---GELDLLSIAKMTPGFVGADLKALVTAAG 405

Query: 641  LVCLRRYSKIQTSSD---VLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPC 697
            +  ++R     +  D   +L     L + E   D M  D +    + +S+        P 
Sbjct: 406  ISAIKRIFTSLSEEDEKKLLLEGVQLQQEENKEDGMELDENPEELLQKSNE------QPQ 459

Query: 698  TSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKV 757
             S L  S++   L    T                      E+  +L +E  DF  A  ++
Sbjct: 460  FSKL--SIIQKFLIKHPTA------------------LTPEQLASLCIEHQDFVTALPQI 499

Query: 758  RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
            +PSA RE    +P V W +VG    V+ +L  A+  P K  E ++++G   P G+LM+GP
Sbjct: 500  QPSAKREGFATIPDVTWSNVGALANVRVELHMAIVQPIKRPEIYEKVGITAPAGVLMWGP 559

Query: 818  PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
            PGC KTL+A+AVA+E+  NF++VKGPEL +K+VGESE+AVR +F +ARA+ P IIFFDE+
Sbjct: 560  PGCGKTLLAKAVANESKANFISVKGPELLNKYVGESERAVRQVFTRARASVPCIIFFDEL 619

Query: 878  DGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
            D L   R  ES     S RV++ LL ELDGL+ R  + VI ATNRPD IDPA+LRPGR D
Sbjct: 620  DALVPKR--ESSLSEASSRVVNTLLTELDGLNDRKGIFVIGATNRPDMIDPAMLRPGRLD 677

Query: 938  RLLYVGPPNETDREEIFR--IHLRKIPCSSDVNIRELACLSEGC---TGADISLICREAA 992
            + LY+  PN ++R EI +  I     P  S V++  +A   E C   +GAD+S + REA 
Sbjct: 678  KTLYIELPNASERLEILKTLIASNGTPLDSSVDLAVVAH-DERCRNFSGADLSSLVREAG 736

Query: 993  ISAIEENL 1000
            + A+++  
Sbjct: 737  VIALKKKF 744



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 133/234 (56%), Gaps = 9/234 (3%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P +    +GG  +V +QLME V  P  H E +   G  PP G+L+ GPPGC KT +A A+
Sbjct: 180 PTLTLSQLGGLDDVVSQLMEVVGMPVLHPEIYMATGIEPPRGVLLHGPPGCGKTTIAYAL 239

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  + F+++  P + S   GESEK VR +F +A+  AP ++FFDEID   AI  K   
Sbjct: 240 AGELQVPFISISAPSVVSGMSGESEKKVREIFDEAKQLAPCLVFFDEID---AITPKRDG 296

Query: 890 GVS--VSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           G    +  R+++QLL  +D L         V +I ATNRPD +D AL R GRFDR + + 
Sbjct: 297 GAQREMERRIVAQLLTSMDELSLDKTDGKPVIIIGATNRPDSLDTALRRAGRFDREICIN 356

Query: 944 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            PNE  R +I    ++ +  S ++++  +A ++ G  GAD+  +   A ISAI+
Sbjct: 357 VPNEHARFKILESMVKNLRISGELDLLSIAKMTPGFVGADLKALVTAAGISAIK 410


>gi|353236288|emb|CCA68286.1| related to RIX7-AAA-type ATPase required for biogenesis and nuclear
            export of 60S ribosomal subunits [Piriformospora indica
            DSM 11827]
          Length = 735

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/577 (40%), Positives = 328/577 (56%), Gaps = 49/577 (8%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G++P +GVLLHGPPG GKT LA   A +  V   +++ P +VS   GESE+ L E F+ A
Sbjct: 128  GVQPPRGVLLHGPPGCGKTLLANAIAGELQVPFISISAPSIVSGMSGESEKTLRETFEEA 187

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTD--GVLVIAATNR 555
             ++AP ++FIDE+DAI P R+    E+ +R+VA  L  MD +   +TD   V++I ATNR
Sbjct: 188  KKNAPCILFIDEIDAITPKRESAQREMERRIVAQFLTCMDDLSWDKTDDKAVMIIGATNR 247

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++ ALRR GR D EI ++              VP    R++IL  L + +    LD 
Sbjct: 248  PDSLDAALRRAGRFDHEIGMN--------------VPDEEGRVQILKVLCAKLR---LDG 290

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
            + ++ S+A  T G+VGADLAAL   A ++ ++R    Q  +D      T  E     +TM
Sbjct: 291  DFDFKSLARQTPGYVGADLAALTGAAGVIAVKRI--FQEIADGKLQIPTALEVAQPDETM 348

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
            L D        +   + LD+ +P T     + L + LP     S    NF          
Sbjct: 349  LLDG------VDDPTEKLDNVAPST--FSVAQLGTMLPTSSPTSSSLANFLMAYPLP--- 397

Query: 734  MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
                E+   L +   DFE A   ++PS+ RE    +P V W DVG    V+ +L   +  
Sbjct: 398  -LTPEQLEPLHITFADFETALPTIQPSSKREGFATIPDVTWADVGALHGVREELHMTIVQ 456

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P    E F+ IG   P G+L++GPPGC KTL+A+AVA+E+  NF++VKGPEL +K+VGES
Sbjct: 457  PILRPELFRSIGIDAPGGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGES 516

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRV 912
            E+A+R +F++ARA++P IIFFDE+D L   R    D +S S  RV++ LL ELDGL  R 
Sbjct: 517  ERALRQVFSRARASSPCIIFFDELDALVPRR---DDSLSESSARVVNTLLTELDGLDSRK 573

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIREL 972
             V VIAATNRPD IDPA+ RPGR D+LLYV  P   +R EIF+   R++P   D  + + 
Sbjct: 574  GVHVIAATNRPDMIDPAMCRPGRLDKLLYVDLPTPDERVEIFKALARRLPIQED-ELVQA 632

Query: 973  ACLS-------EGCTGADISLICREAAISAIEENLDA 1002
            A L        EG +GAD++ + REA ++++   + A
Sbjct: 633  AILDFVHGERFEGFSGADLAALVREAGVTSLRRTITA 669



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/254 (40%), Positives = 143/254 (56%), Gaps = 23/254 (9%)

Query: 399 FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGK 457
           F  +      D+  L G+ +E   L   I+   ++  L  S+G+    GVLL GPPG GK
Sbjct: 429 FATIPDVTWADVGALHGVREE---LHMTIVQPILRPELFRSIGIDAPGGVLLWGPPGCGK 485

Query: 458 TSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAP 517
           T LA+  A++S  N  +V GPE++++  GESE+AL +VF  A  S+P ++F DELDA+ P
Sbjct: 486 TLLAKAVANESRANFISVKGPELLNKYVGESERALRQVFSRARASSPCIIFFDELDALVP 545

Query: 518 ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
            R D   E S R+V TLL  +DG+    GV VIAATNRPD I+PA+ RPGRLD+ + +D+
Sbjct: 546 RRDDSLSESSARVVNTLLTELDGLDSRKGVHVIAATNRPDMIDPAMCRPGRLDKLLYVDL 605

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHAL---LSGMEHSLLDSEVEYLSMATH--GFVGADL 632
                         P+P +R+EI  AL   L   E  L+ + +          GF GADL
Sbjct: 606 --------------PTPDERVEIFKALARRLPIQEDELVQAAILDFVHGERFEGFSGADL 651

Query: 633 AALCNEAALVCLRR 646
           AAL  EA +  LRR
Sbjct: 652 AALVREAGVTSLRR 665



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 138/256 (53%), Gaps = 6/256 (2%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P ++  D+GG +    +L+E V  P +H E +   G +PP G+L+ GPPGC KTL+A A+
Sbjct: 93   PSIRLSDLGGVQNCVEKLLELVAMPLRHPEIYLHTGVQPPRGVLLHGPPGCGKTLLANAI 152

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E  + F+++  P + S   GESEK +R  F +A+ NAP I+F DEID +   R  ES 
Sbjct: 153  AGELQVPFISISAPSIVSGMSGESEKTLRETFEEAKKNAPCILFIDEIDAITPKR--ESA 210

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
               +  R+++Q L  +D L         V +I ATNRPD +D AL R GRFD  + +  P
Sbjct: 211  QREMERRIVAQFLTCMDDLSWDKTDDKAVMIIGATNRPDSLDAALRRAGRFDHEIGMNVP 270

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI 1005
            +E  R +I ++   K+    D + + LA  + G  GAD++ +   A + A++        
Sbjct: 271  DEEGRVQILKVLCAKLRLDGDFDFKSLARQTPGYVGADLAALTGAAGVIAVKRIFQEIAD 330

Query: 1006 TMQHLKTAIRHVQPSE 1021
                + TA+   QP E
Sbjct: 331  GKLQIPTALEVAQPDE 346


>gi|307168241|gb|EFN61467.1| Nuclear valosin-containing protein-like [Camponotus floridanus]
          Length = 943

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 261/736 (35%), Positives = 391/736 (53%), Gaps = 70/736 (9%)

Query: 349  ERSQPQVTESMDH--ESNAFVINHETKVYLYPPLNAVSKSLREGTLP--------NAQIE 398
            E+ +P V+    H  +S    +  ET V     +  V ++L E T          + Q  
Sbjct: 213  EKPEPSVSNPEIHASKSETLALKSETPVKSNTSVTQVKQTLVESTRKRQRDKENDSGQFL 272

Query: 399  FQNVQATV---EQDI--SKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPP 453
            F   Q TV   E  I  S +GG  K    +  ++           LG+ P +G LLHGPP
Sbjct: 273  FAKKQRTVPVTETKITFSSVGGNDKILKTVCKLLAHMKHPEIFKQLGISPPRGFLLHGPP 332

Query: 454  GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
            G GKT LA   A +  + L  V GPE+V+   GESE  + ++F+ A   AP VVF+DE+D
Sbjct: 333  GCGKTLLAYAVAGELNMPLLKVAGPELVTGVSGESEARIRDLFEQALTLAPCVVFLDEID 392

Query: 514  AIAPARKDGGEELSQRMVATLLNLMDGVC---RTDGVLVIAATNRPDSIEPALRRPGRLD 570
            A+AP R     E+ +R+VA LL+ +D +      D VLVI ATNRPDS++PALRR GR D
Sbjct: 393  AVAPHRATAQREMERRIVAQLLSSLDELNLKENGDRVLVIGATNRPDSLDPALRRAGRFD 452

Query: 571  REIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFV 628
            RE+ +               +P    R +IL       E+ +L   +   ++A  T GFV
Sbjct: 453  REVCL--------------GIPDREARAKILAV---HTENVVLAPNISLSTIASLTPGFV 495

Query: 629  GADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSR 688
            GADL AL  EAA+  + R  +    S        + E +  S+   Q      ++  ++ 
Sbjct: 496  GADLVALIREAAMAAVDRVFEDLNRSKQTEKLPEIIETDKQSNKEAQTFKNLESLATTNV 555

Query: 689  DCLDSASPCTSDLPTSLLSSSLPLRGT-------VSEI-------ADNFHNGVSDSSGGM 734
            + LD+    T++  T++ ++S  LR +       ++E+       + +F N ++      
Sbjct: 556  ESLDTN--ITTEASTTIENTSTYLRDSPKNPSPEITEMDVIQEQHSPDFSNLLAWLRNEP 613

Query: 735  FMS-EKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
             +S E   +L +E  DFE A   V+PSA RE    VP V W+DVG  ++++ +L  A+  
Sbjct: 614  PLSPECLSSLCIEHSDFETALRVVQPSAKREGFATVPDVTWDDVGSLQDIRQELQMAILA 673

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P KH E F  +G    +G+L+ GPPGC KTL+A+A+A+EAG+NF++VKGPEL + +VGES
Sbjct: 674  PVKHTEHFNALGLSAASGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELLNMYVGES 733

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            EKAVR  F +A+ + P +IFFDEID L   R  E D  S + RV++Q+L E+DG+  R  
Sbjct: 734  EKAVRQCFLRAKNSMPCVIFFDEIDALCPKR-TEGDN-SATSRVVNQMLTEMDGVESRQG 791

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR-----KIPCSSDVN 968
            V ++AA+NRPD ID A+LRPGR D+++YVG P  +DR +I R   +     K+  + D+N
Sbjct: 792  VFLMAASNRPDIIDSAVLRPGRLDKIVYVGLPTASDRVDILRAITKNGTRPKLASNVDLN 851

Query: 969  IRELACLSEGCTGADISLICREAAISAIEE---NLDASRITMQHLKTAIRHVQPSEIHSY 1025
                    EG TGAD++ + +EA + A++E         ITMQH+  A       +I  Y
Sbjct: 852  QVGYNDKCEGYTGADLAALIKEAGMEALKEIIAGYGQPEITMQHIYQAFD----KDIKYY 907

Query: 1026 KELSAKFQRLVHSNAE 1041
            ++ S  +   +  N+E
Sbjct: 908  EKFSKLYS--IKKNSE 921


>gi|440899234|gb|ELR50566.1| Nuclear valosin-containing protein-like protein, partial [Bos
            grunniens mutus]
          Length = 802

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 233/573 (40%), Positives = 318/573 (55%), Gaps = 67/573 (11%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +GVLLHGPPG GKT LA   A +  + +  V   E+VS   GESEQ L E+F+ 
Sbjct: 276  LGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQ 335

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP ++FIDE+DAI P R+   +++ +R+VA LL  MD    V  T  VLVI ATNR
Sbjct: 336  AVSSAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 395

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +   L ++
Sbjct: 396  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR--LPET 439

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
                +L+  T GFVGADL ALC EAA+  + R                L E +G      
Sbjct: 440  FHFRHLAHLTPGFVGADLMALCREAAMCAVNR---------------VLMELQGQYKKNP 484

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPT--SLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
            +         +  R   +  S    +L     LL +  PL                    
Sbjct: 485  EIEASPSEGDQEERTGAEPTSKTQEELQRLLGLLRNQDPLS------------------- 525

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
                 E+   L +EL DF  A   V+PSA RE    VP V W D+G   +++ +L  A+ 
Sbjct: 526  ----EEQLKGLCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAIL 581

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P ++ + F+ +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGE
Sbjct: 582  APVRNPDQFRALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 641

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F +A+ +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R 
Sbjct: 642  SERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSAREVGASV--RVVNQLLTEMDGLETRQ 699

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNI 969
             V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   K P  +DVN+
Sbjct: 700  QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNL 759

Query: 970  RELAC-LSEGC-TGADISLICREAAISAIEENL 1000
              +A  L   C TGAD+S + REA+I A+++ +
Sbjct: 760  EAIAGDLRCDCYTGADLSALVREASICALKQEM 792



 Score =  179 bits (455), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 161/303 (53%), Gaps = 17/303 (5%)

Query: 724  HNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREV 783
              G  +S GG    E      L+ VD E   +  + +  + + L++  VK+EDVGG    
Sbjct: 202  RKGKLNSKGGKKKKED-----LQEVDGEIEAVLQKRAKAKGLELQISSVKFEDVGGN--- 253

Query: 784  KTQLMEAVEW--PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVK 841
             T L E  +     +H E +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V 
Sbjct: 254  DTTLKEVCKMLIHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVA 313

Query: 842  GPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQL 901
              E+ S   GESE+ +R LF +A ++AP I+F DEID +   R  E     +  R+++QL
Sbjct: 314  ATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKR--EIASKDMERRIVAQL 371

Query: 902  LVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            L  +D L+       V VI ATNRPD +DPAL R GRFDR + +G P+E  RE I +   
Sbjct: 372  LTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLC 431

Query: 959  RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            RK+      + R LA L+ G  GAD+  +CREAA+ A+   L    +  Q+ K       
Sbjct: 432  RKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNRVL--MELQGQYKKNPEIEAS 489

Query: 1019 PSE 1021
            PSE
Sbjct: 490  PSE 492



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 142/266 (53%), Gaps = 21/266 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 548 PSAKREGFATVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFRALGLVTPAGVLLAG 605

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 606 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 665

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R       S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 666 VDALCPRRSAREVGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 725

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 726 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 771

Query: 628 VGADLAALCNEAALVCLRRYSKIQTS 653
            GADL+AL  EA++  L++    Q S
Sbjct: 772 TGADLSALVREASICALKQEMARQKS 797


>gi|195162967|ref|XP_002022325.1| GL26363 [Drosophila persimilis]
 gi|194104286|gb|EDW26329.1| GL26363 [Drosophila persimilis]
          Length = 909

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 241/688 (35%), Positives = 376/688 (54%), Gaps = 78/688 (11%)

Query: 406  VEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCA 465
            + +    +GG+      L +++I          LGL P++G+LLHGPPG GKT LAR  +
Sbjct: 228  ITESFRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAIS 287

Query: 466  HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE 525
                + L  V   E++    GESEQ + +VF+ A   +P V+FIDE+DAI   R+   ++
Sbjct: 288  GQLKMPLLEVPATELIGGISGESEQRIRDVFEHAMDFSPCVLFIDEIDAIGGNRQWAAKD 347

Query: 526  LSQRMVATLLNLMDGVCRTD---GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
            + +R+V+ L++ MD +  T+    V+VIAAT RPD I+P LRR GRLD EI +       
Sbjct: 348  MERRIVSQLISSMDNLKVTEFGQSVIVIAATTRPDVIDPGLRRVGRLDHEIAL------- 400

Query: 583  LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAAL-CNEA 639
                    +PS  +R EIL     G+    +D ++ Y  +A  T G+VG DL AL C  A
Sbjct: 401  -------HIPSRKERREILRIQCEGLS---VDPKLNYDKIAELTPGYVGGDLMALVCRSA 450

Query: 640  ALVCLRR----YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDS----------DCSRNITE 685
            A+   RR    + ++  +S+   +T  L + E + +T+L             D ++++ E
Sbjct: 451  AVAVKRRSMKKFRELHAASEKNMTTVELDDDEPNDETVLGGKAEAKAEGAKADGAKDVEE 510

Query: 686  SS-----RDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKG 740
            +S     +D  D  +   SD   +   +     G   +   N    V ++   +   E  
Sbjct: 511  TSGDKSDKDKSDGENLNKSDSDNAEKGAEGATNGKTPDKPSNAAMDVDENEEKLLTDEND 570

Query: 741  CA----------------------LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVG 778
                                      L LVDF  A   ++PSA RE  + VP   WED+G
Sbjct: 571  YYEPTLAELTNFLDNPPEEFYDPNFCLTLVDFMAAIKVMQPSAKREGFITVPDTTWEDIG 630

Query: 779  GQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFL 838
              ++++ +L  AV  P K+ E  +R+G   P+G+L+ GPPGC KTL+A+A+A+EAG+NF+
Sbjct: 631  ALQDIRDELKLAVLAPVKYPEKLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFI 690

Query: 839  AVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVM 898
            +VKGPEL + +VGESE+AVRS F +AR +AP +IFFDE D L   R +  DG +   R++
Sbjct: 691  SVKGPELMNMYVGESERAVRSCFQRARNSAPCVIFFDEFDSLCPKRSEGGDGNNSGTRIV 750

Query: 899  SQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            +QLL E+DG+ +R  V ++AATNRPD IDPA+LRPGR D +LYVG P + +R EI +   
Sbjct: 751  NQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGLPEQNERAEILKAST 810

Query: 959  R---KIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-------EENLDASRITMQ 1008
            +   +   + DV++ +LA  +EG TGAD++ + ++A++ A+       ++NLD   +  Q
Sbjct: 811  KNGTRPVMADDVDLDDLAAQTEGYTGADLAGLVKQASMYALRQALAEDDDNLDGLCVRRQ 870

Query: 1009 HLKTAIRHVQPS----EIHSYKELSAKF 1032
            H K A++ ++PS    +   Y++L  K+
Sbjct: 871  HFKDALQQLRPSVSEQDRKVYEKLRQKY 898



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 141/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V  T  +DI  L  +  E  +   ++        L  LGL    GVLL G
Sbjct: 611 PSAKREGFITVPDTTWEDIGALQDIRDELKLA--VLAPVKYPEKLERLGLTAPSGVLLCG 668

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A+++G+N  +V GPE+++   GESE+A+   F  A  SAP V+F DE
Sbjct: 669 PPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRSCFQRARNSAPCVIFFDE 728

Query: 512 LDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
            D++ P R +GG+      R+V  LL  MDGV    GV ++AATNRPD I+PA+ RPGRL
Sbjct: 729 FDSLCPKRSEGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRL 788

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGF 627
           D       + L+         +P   +R EIL A        ++  +V+   +A  T G+
Sbjct: 789 D-------TILY-------VGLPEQNERAEILKASTKNGTRPVMADDVDLDDLAAQTEGY 834

Query: 628 VGADLAALCNEAALVCLRR 646
            GADLA L  +A++  LR+
Sbjct: 835 TGADLAGLVKQASMYALRQ 853


>gi|195018023|ref|XP_001984706.1| GH14878 [Drosophila grimshawi]
 gi|193898188|gb|EDV97054.1| GH14878 [Drosophila grimshawi]
          Length = 957

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 239/702 (34%), Positives = 377/702 (53%), Gaps = 102/702 (14%)

Query: 413  LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
            +GG+      L +++I          LGL P++G+LLHGPPG+GKT LAR  A    + L
Sbjct: 265  IGGMDGTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGSGKTYLARAIAGQLKMPL 324

Query: 473  FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVA 532
              V   E+++   GESE+ + +VF+ A   +P V+FIDE+DAIA  R+   +++ +R+V+
Sbjct: 325  LEVPATELIAGISGESEERIRDVFEQAIDHSPCVLFIDEIDAIAGNRQWAAKDMERRIVS 384

Query: 533  TLLNLMDGVCRTD---GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
             L+  +D +  T+    V+VI AT RPD+++P LRR GR D EI I              
Sbjct: 385  QLITSLDQLKATEFGQSVVVIGATTRPDTLDPGLRRIGRFDHEIAI-------------- 430

Query: 590  AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR- 646
             +PS  +R EIL     G+    +D ++ Y  +A  T G+VGADL AL + AA + ++R 
Sbjct: 431  HIPSRKERREILRIQCEGLS---IDPKLNYDKIAELTPGYVGADLLALVSRAATIAVKRR 487

Query: 647  ----YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNIT--ESSRDCLDSASPCT-- 698
                + ++  +S++  +T TL + E + D   + +   +  T  E+ +      SP T  
Sbjct: 488  SMKKFRELHAASEMNMTTVTLDDDEPNEDKHEEQTSSQKEQTSSETEQTLAPEKSPPTVA 547

Query: 699  --------SDLPTSL---------LSSSLPLRGTVSE----------------------- 718
                    +D P            +SS  P+     E                       
Sbjct: 548  EQQPPNTETDKPVEATNGEKASEEVSSEAPMEVDNKEDKDDDVGDEVLPAAKDESEKQPI 607

Query: 719  -------IADNFH-------NGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
                   ++D+F+           D+    F     C   L L DF  A   ++PSA RE
Sbjct: 608  SSAKSPILSDDFYEPTLAELTNFLDNPPEEFADPNFC---LTLDDFTAAIKVMQPSAKRE 664

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
              + VP   W+D+G   +++ +L  AV  P K+ E   R+G   P+G+L+ GPPGC KTL
Sbjct: 665  GFITVPDTTWDDIGSLNDIREELKLAVLAPVKYPEMLARLGLEAPSGVLLCGPPGCGKTL 724

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+A+A+EAG+NF++VKGPEL + +VGESE+AVR+ F +AR ++P +IFFDE D L   R
Sbjct: 725  LAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSSPCVIFFDEFDSLCPKR 784

Query: 885  GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
                DG +   R+++QLL E+DG+ +R  V ++AATNRPD IDPA+LRPGR D +LYVG 
Sbjct: 785  SDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGL 844

Query: 945  PNETDREEIFRIHLR--KIPC-SSDVNIRELACLSEGCTGADISLICREAAISAI----- 996
            P E +R +I +   +  K P  S DV++ ELA  ++G TGAD++ + ++A++ ++     
Sbjct: 845  PQEQERVDILKATTKNGKRPVLSEDVDLNELAAKTDGYTGADLAGLVKQASMFSLRHSLN 904

Query: 997  --EENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
              + N+D   +  QH + A++ ++PS    +   Y++L  K+
Sbjct: 905  NGDTNVDDLCVRKQHFEEALKQLRPSVSEQDRKVYEKLRQKY 946



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/258 (38%), Positives = 143/258 (55%), Gaps = 21/258 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V  T   DI  L  + +E  +   ++        L+ LGL    GVLL G
Sbjct: 659 PSAKREGFITVPDTTWDDIGSLNDIREELKLA--VLAPVKYPEMLARLGLEAPSGVLLCG 716

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A+++G+N  +V GPE+++   GESE+A+   F  A  S+P V+F DE
Sbjct: 717 PPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSSPCVIFFDE 776

Query: 512 LDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
            D++ P R DGG+      R+V  LL  MDGV    GV ++AATNRPD I+PA+ RPGRL
Sbjct: 777 FDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRL 836

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGF 627
           D       + L+         +P   +R++IL A     +  +L  +V+   L+  T G+
Sbjct: 837 D-------TILY-------VGLPQEQERVDILKATTKNGKRPVLSEDVDLNELAAKTDGY 882

Query: 628 VGADLAALCNEAALVCLR 645
            GADLA L  +A++  LR
Sbjct: 883 TGADLAGLVKQASMFSLR 900



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 7/225 (3%)

Query: 774 WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
           + D+GG      +L E +    K  E + ++G  P  G+L+ GPPG  KT +ARA+A + 
Sbjct: 262 FRDIGGMDGTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGSGKTYLARAIAGQL 320

Query: 834 GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            +  L V   EL +   GESE+ +R +F +A  ++P ++F DEID +A  R  +     +
Sbjct: 321 KMPLLEVPATELIAGISGESEERIRDVFEQAIDHSPCVLFIDEIDAIAGNR--QWAAKDM 378

Query: 894 SDRVMSQLLVELDGLHQR---VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
             R++SQL+  LD L       +V VI AT RPD +DP L R GRFD  + +  P+  +R
Sbjct: 379 ERRIVSQLITSLDQLKATEFGQSVVVIGATTRPDTLDPGLRRIGRFDHEIAIHIPSRKER 438

Query: 951 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD-ISLICREAAIS 994
            EI RI    +     +N  ++A L+ G  GAD ++L+ R A I+
Sbjct: 439 REILRIQCEGLSIDPKLNYDKIAELTPGYVGADLLALVSRAATIA 483


>gi|358056941|dbj|GAA97291.1| hypothetical protein E5Q_03969 [Mixia osmundae IAM 14324]
          Length = 1197

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 239/598 (39%), Positives = 340/598 (56%), Gaps = 66/598 (11%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G+RP  GVLL GPPG GKT LA   A + GV    ++ P VVS   GESE+A+ + F+ A
Sbjct: 145  GVRPPTGVLLCGPPGCGKTMLAGAIAGELGVPFLNISAPSVVSGMSGESERAIRDTFEEA 204

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
            +  AP ++FIDE+DAI P R++   E+ +R+VA LL  MD +   +TD   VL+I ATNR
Sbjct: 205  ASLAPCILFIDEIDAITPKRENAAREMERRIVAQLLTCMDDLSWEKTDNKPVLIIGATNR 264

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++ ALRR GR D EI +               VP    R +IL  + S +  +  D 
Sbjct: 265  PDSLDTALRRAGRFDHEIVM--------------GVPDENARKQILRVVSSKLRLAG-DF 309

Query: 616  EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
            +   L+ +T G+VGADL AL   A ++ ++R  +     D+  ++G +     + D+ML 
Sbjct: 310  DFRALAKSTPGYVGADLEALAGAAGIIAVKRIFE-----DLKATSGHV-----NGDSMLV 359

Query: 676  DSDCSR-NITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
            D+  S  + TE       S  P    L  S    + P   T S++               
Sbjct: 360  DAQTSSGDATEIITGPFTSMPPSLQLLAISAFLQAHPEPLTDSQLE-------------- 405

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
                    L +   DF++A ++V+PS+ RE    VP V W DVG   E++ +L  A+  P
Sbjct: 406  -------PLHISHADFQQALLQVQPSSKREGFTTVPDVSWSDVGALSEIREELKMAIVQP 458

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
             K  E F  +G   P G+L++GPPGC KTL+A+AVA+E+  NF++V+GPEL +K+VGESE
Sbjct: 459  IKRPELFASLGIATPCGVLLWGPPGCGKTLLAKAVANESAANFISVRGPELLNKYVGESE 518

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVN 913
            +AVR +FA+ARA++P ++FFDE+D L   R    D +S S  RV++ LL ELDGL  R  
Sbjct: 519  RAVRQVFARARASSPCVVFFDELDALVPRR---DDNLSESSARVVNTLLTELDGLEPRKQ 575

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELA 973
            V V+ ATNRPD IDPA++RPGR D+LLYV  P   +RE+I R    K P +SDV++  +A
Sbjct: 576  VFVVGATNRPDMIDPAMVRPGRLDKLLYVDLPTPAEREDIIRAQSTKTPFASDVDLAAVA 635

Query: 974  CLS--EGCTGADISLICREAAISAIEENLD---ASRITMQ------HLKTAIRHVQPS 1020
              +  +G +GAD+S + REA   A+ E L    AS+  +Q      HL  A+  V PS
Sbjct: 636  VDARCDGFSGADLSALVREACSLALREVLKLPLASQTDLQVLVRAAHLDEALDKVSPS 693



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 126/219 (57%), Gaps = 6/219 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG      Q++E V  P  H E +   G RPPTG+L+ GPPGC KT++A A+
Sbjct: 110 PATRLRDLGGVTTAIEQILELVAMPLCHPEIYLHTGVRPPTGVLLCGPPGCGKTMLAGAI 169

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ FL +  P + S   GESE+A+R  F +A + AP I+F DEID +   R  E+ 
Sbjct: 170 AGELGVPFLNISAPSVVSGMSGESERAIRDTFEEAASLAPCILFIDEIDAITPKR--ENA 227

Query: 890 GVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++QLL  +D L         V +I ATNRPD +D AL R GRFD  + +G P
Sbjct: 228 AREMERRIVAQLLTCMDDLSWEKTDNKPVLIIGATNRPDSLDTALRRAGRFDHEIVMGVP 287

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
           +E  R++I R+   K+  + D + R LA  + G  GAD+
Sbjct: 288 DENARKQILRVVSSKLRLAGDFDFRALAKSTPGYVGADL 326



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 145/249 (58%), Gaps = 22/249 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +G LS+    LK  I+    +  L +SLG+    GVLL GPPG GKT LA+  A++S 
Sbjct: 439 SDVGALSEIREELKMAIVQPIKRPELFASLGIATPCGVLLWGPPGCGKTLLAKAVANESA 498

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            N  +V GPE++++  GESE+A+ +VF  A  S+P VVF DELDA+ P R D   E S R
Sbjct: 499 ANFISVRGPELLNKYVGESERAVRQVFARARASSPCVVFFDELDALVPRRDDNLSESSAR 558

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V TLL  +DG+     V V+ ATNRPD I+PA+ RPGRLD+ + +D+            
Sbjct: 559 VVNTLLTELDGLEPRKQVFVVGATNRPDMIDPAMVRPGRLDKLLYVDL------------ 606

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGFVGADLAALCNEAALVCLR 645
             P+PA+R +I+ A  +    +   S+V+  ++A      GF GADL+AL  EA  + LR
Sbjct: 607 --PTPAEREDIIRAQSTKTPFA---SDVDLAAVAVDARCDGFSGADLSALVREACSLALR 661

Query: 646 RYSKIQTSS 654
              K+  +S
Sbjct: 662 EVLKLPLAS 670


>gi|345561628|gb|EGX44716.1| hypothetical protein AOL_s00188g54 [Arthrobotrys oligospora ATCC
           24927]
          Length = 787

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 229/599 (38%), Positives = 332/599 (55%), Gaps = 67/599 (11%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           +  +GG+      + D+I +  +  +    LG++  +G+LLHGPPG GKT LA   A   
Sbjct: 191 LKDIGGIEHILNDIHDLIDMPLNCATCYDHLGIQIPRGILLHGPPGCGKTMLANAIAAHH 250

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
           GV    ++ P +VS   GESE+ L E+F+ A + AP+++FIDE+DA+ P R     E+ +
Sbjct: 251 GVPFIPISAPSIVSGMSGESEKKLREIFEEAVKLAPSIIFIDEIDAVMPKRDSAQREMEK 310

Query: 529 RMVATLLNLMD--GVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
           R+VA +L  MD   + +T G  V VI ATNRPDS++PALRR GR DREI +         
Sbjct: 311 RIVAQMLTCMDDLSLSKTGGNPVFVIGATNRPDSLDPALRRAGRFDREICL--------- 361

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 VP    R +IL  L   ++ S  D + + L+  T GFVGADL++L   A    +
Sbjct: 362 -----GVPDEVGREKILRVLSEKLKLSG-DFDFKKLAKLTPGFVGADLSSLITAAGTFAI 415

Query: 645 RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
           +R   I     V H  GT  + EG                                   S
Sbjct: 416 KR---IYDDLKVRHQIGTAEQDEG----------------------------------VS 438

Query: 705 LLSSSLPLRGTVSEIADNFHNGVSDSSGGMF---MSEKGCALKLELVDFEKARMKVRPSA 761
           +L+ ++ + G    +A+   N + + +   F     E+   L + + DF  A  KV+PS+
Sbjct: 439 ILNGAMEIDGGPG-LANGKPNPILEDAPNPFPPLSPEELERLSITIDDFLTALPKVQPSS 497

Query: 762 MREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCS 821
            RE    VP V W+ +G    ++ Q+  A+  P  H E F+ +G   P G+L++GPPGC 
Sbjct: 498 KREGFATVPDVTWQQIGALEAIRKQMQLAIVKPIAHPEIFEAVGITSPAGVLLYGPPGCG 557

Query: 822 KTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA 881
           KTL+A+AVA+E+  NF++VKGPEL +KWVGESE+AVR +F +ARA+ P +IFFDE+D LA
Sbjct: 558 KTLLAKAVANESNANFISVKGPELLNKWVGESERAVRQVFMRARASQPCVIFFDELDALA 617

Query: 882 AIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLL 940
              GK  D  +  + RV++ LL ELDGL  R  V VIAATNRPD IDPA+LRPGR D+ L
Sbjct: 618 ---GKREDATTEATSRVVNTLLTELDGLSDRKGVYVIAATNRPDMIDPAMLRPGRLDKAL 674

Query: 941 YVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS--EGCTGADISLICREAAISAIE 997
           +V  P   +R +I +    K+P    +++ ++A  S     +GAD+S + REAA SA+E
Sbjct: 675 FVALPTAEERLDIMKKLTMKMPLHESIDLWKIADDSRCRNFSGADLSSLVREAANSAVE 733



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 144/259 (55%), Gaps = 8/259 (3%)

Query: 756  KVRPSAMREVILEVPK--VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGIL 813
            +  P   ++ I   P   V  +D+GG   +   + + ++ P      +  +G + P GIL
Sbjct: 171  RTEPPVKKQKIDRAPPTGVSLKDIGGIEHILNDIHDLIDMPLNCATCYDHLGIQIPRGIL 230

Query: 814  MFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIF 873
            + GPPGC KT++A A+A+  G+ F+ +  P + S   GESEK +R +F +A   APSIIF
Sbjct: 231  LHGPPGCGKTMLANAIAAHHGVPFIPISAPSIVSGMSGESEKKLREIFEEAVKLAPSIIF 290

Query: 874  FDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPA 929
             DEID  A +  ++S    +  R+++Q+L  +D L         V VI ATNRPD +DPA
Sbjct: 291  IDEID--AVMPKRDSAQREMEKRIVAQMLTCMDDLSLSKTGGNPVFVIGATNRPDSLDPA 348

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            L R GRFDR + +G P+E  RE+I R+   K+  S D + ++LA L+ G  GAD+S +  
Sbjct: 349  LRRAGRFDREICLGVPDEVGREKILRVLSEKLKLSGDFDFKKLAKLTPGFVGADLSSLIT 408

Query: 990  EAAISAIEENLDASRITMQ 1008
             A   AI+   D  ++  Q
Sbjct: 409  AAGTFAIKRIYDDLKVRHQ 427



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 136/245 (55%), Gaps = 21/245 (8%)

Query: 399 FQNVQATVEQDISKLGGLSKEY--AILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           F  V     Q I  L  + K+   AI+K I    +      ++G+    GVLL+GPPG G
Sbjct: 502 FATVPDVTWQQIGALEAIRKQMQLAIVKPI----AHPEIFEAVGITSPAGVLLYGPPGCG 557

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A++S  N  +V GPE++++  GESE+A+ +VF  A  S P V+F DELDA+A
Sbjct: 558 KTLLAKAVANESNANFISVKGPELLNKWVGESERAVRQVFMRARASQPCVIFFDELDALA 617

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
             R+D   E + R+V TLL  +DG+    GV VIAATNRPD I+PA+ RPGRLD+ + + 
Sbjct: 618 GKREDATTEATSRVVNTLLTELDGLSDRKGVYVIAATNRPDMIDPAMLRPGRLDKALFV- 676

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGME-HSLLDSEVEYLSMATHGFVGADLAAL 635
                        A+P+  +RL+I+  L   M  H  +D            F GADL++L
Sbjct: 677 -------------ALPTAEERLDIMKKLTMKMPLHESIDLWKIADDSRCRNFSGADLSSL 723

Query: 636 CNEAA 640
             EAA
Sbjct: 724 VREAA 728


>gi|156101027|ref|XP_001616207.1| cell division cycle protein 48 homologue [Plasmodium vivax Sal-1]
 gi|148805081|gb|EDL46480.1| cell division cycle protein 48 homologue, putative [Plasmodium vivax]
          Length = 822

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/600 (38%), Positives = 331/600 (55%), Gaps = 98/600 (16%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG  K+ A ++++I +         +LG++P +GVLL+GPPG+GKT +AR  A+++G  
Sbjct: 209  IGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAF 268

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPEV+S+  GE+E  L   F+ A +++PA++FIDE+D+IAP R+    E+ +R+V
Sbjct: 269  FFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVV 328

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+     V+VIAATNR +SI+PALRR GR DREI+I               V
Sbjct: 329  SQLLTLMDGIKTRGQVVVIAATNRQNSIDPALRRFGRFDREIDI--------------GV 374

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R EIL      M+ S  D ++E L+ +THGFVGADLA LC EAAL C+R      
Sbjct: 375  PDDNGRFEILRIHTKNMKLS-PDVKLEELASSTHGFVGADLAQLCTEAALTCIRE----- 428

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
               DV+                L+D    + + ES   C+      T D     L +  P
Sbjct: 429  -KMDVID---------------LEDEIIDKEVLESM--CV------TQDHFNMALGTCNP 464

Query: 712  --LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
              LR TV E+     N   D  GG+   +                     + +RE+IL  
Sbjct: 465  SSLRETVVEVP----NVKWDDIGGLDEVK---------------------NTLREMIL-- 497

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
                                 ++ P K    F++ G  P  G+L +GPPGC KTL+A+AV
Sbjct: 498  -------------------YPIDHPDK----FEKFGLSPSRGVLFYGPPGCGKTLLAKAV 534

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-S 888
            ASE   NF+++KGPEL + W GESE  VR +F KARA AP ++FFDE+D +   RG    
Sbjct: 535  ASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSTLG 594

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
            DG    DRVM+QLL E+DG+  + N+  I ATNRP+ +D ALLRPGR D+L+Y+  P+  
Sbjct: 595  DGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLA 654

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQ 1008
             R  I    LRK P + +V I  LA  + G +GAD++ +C+ AA +AI +++D+  +  +
Sbjct: 655  ARISILSAVLRKSPIADNVPIDFLAQKTAGFSGADLAELCQRAARAAIRDSIDSEEMNKK 714



 Score =  215 bits (548), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 107/232 (46%), Positives = 152/232 (65%), Gaps = 2/232 (0%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++D+GG ++   Q+ E +E P +H   FK +G +PP G+L++GPPG  KT +ARAVA
Sbjct: 203  EIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVA 262

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GE+E  +R  F +A  N+P+IIF DEID +A  R K ++G
Sbjct: 263  NETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREK-TNG 321

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV+SQLL  +DG+  R  V VIAATNR + IDPAL R GRFDR + +G P++  R
Sbjct: 322  -EVERRVVSQLLTLMDGIKTRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGR 380

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
             EI RIH + +  S DV + ELA  + G  GAD++ +C EAA++ I E +D 
Sbjct: 381  FEILRIHTKNMKLSPDVKLEELASSTHGFVGADLAQLCTEAALTCIREKMDV 432


>gi|50286221|ref|XP_445539.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524844|emb|CAG58450.1| unnamed protein product [Candida glabrata]
          Length = 834

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 232/613 (37%), Positives = 347/613 (56%), Gaps = 72/613 (11%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGG+    A L ++I    +   +  S G+ P +GVLLHGPPG GKTS+A   A + 
Sbjct: 197  LSALGGMDDVIAQLMELIGLPILHPEIYLSTGVEPPRGVLLHGPPGCGKTSIANALAGEL 256

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG--EEL 526
             V   +++ P VVS   GESE+ + E+FD A   AP ++F DE+DAI P R DGG   E+
Sbjct: 257  QVPFISISAPSVVSGMSGESEKKIRELFDEAKSLAPCLMFFDEIDAITPKR-DGGAQREM 315

Query: 527  SQRMVATLLNLMD--GVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
             +R+VA LL  MD   +  T+G  V+VI ATNRPDS++ ALRR GR DREI ++      
Sbjct: 316  ERRIVAQLLTSMDELTLSNTNGKPVIVIGATNRPDSLDAALRRAGRFDREICLN------ 369

Query: 583  LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAA 640
                    VP+   RL IL  +   ++   +D E+++  +A  T GFVGADL AL   A 
Sbjct: 370  --------VPNEISRLHILKKMAGKLK---IDGEIDFHKLAKLTPGFVGADLKALTTAAG 418

Query: 641  LVCLRR--------YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLD 692
               ++R           I+   D+      L   EG+S    +DSD   N+         
Sbjct: 419  TCAIKRIFETYASIVPNIEAVEDMDVDKNKLDSVEGNSQ---KDSDSEINLKN------- 468

Query: 693  SASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEK 752
                      T+ +   LPL   +     N+ + ++D        ++   L ++  DF K
Sbjct: 469  ----------TANMIDPLPL-SVIQRFIHNYPDPLND--------DQLNQLTIKYEDFLK 509

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            A   ++P+A RE    VP V W +VG  ++V+ +L  A+  P K  E ++++G   P G+
Sbjct: 510  ALPTIQPTAKREGFATVPDVTWSNVGALQKVRIELNMAIVQPIKRPELYEKVGISAPGGV 569

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F +ARA+ P +I
Sbjct: 570  LLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFTRARASVPCVI 629

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLR 932
            FFDE+D L   R  ++     S RV++ LL ELDGL+ R  + V+ ATNRPD IDPA+LR
Sbjct: 630  FFDELDALVPRR--DTSMSESSSRVVNTLLTELDGLNDRHGIFVVGATNRPDMIDPAMLR 687

Query: 933  PGRFDRLLYVGPPNETDREEIFRIHL--RKIPCSSDVNIRELACLSEGC---TGADISLI 987
            PGR D+ L++  PNE ++ +I R        P S DV+++E+    E C   +GAD++ +
Sbjct: 688  PGRLDKTLFIELPNEQEKFDIIRTLTISNGTPLSKDVDLKEIVA-DERCRNFSGADLAAL 746

Query: 988  CREAAISAIEENL 1000
             RE+++ A++ N 
Sbjct: 747  VRESSVLALKRNF 759


>gi|344301833|gb|EGW32138.1| hypothetical protein SPAPADRAFT_71630 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 820

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 239/624 (38%), Positives = 343/624 (54%), Gaps = 90/624 (14%)

Query: 437  SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
            ++ G+ P +GVLL+GPPG GKT++A   A +  V    ++ P +VS   GESE+ L E+F
Sbjct: 212  TATGVEPPRGVLLYGPPGCGKTTIANALAGELQVPFINISAPSIVSGMSGESEKKLRELF 271

Query: 497  DSASQSAPAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG--VLVI 550
            + A   AP ++F+DE+DAI P R DGG   E+ +R+VA LL LMD +   +TDG  V+VI
Sbjct: 272  EEAKTVAPCLIFMDEIDAITPKR-DGGAQREMERRIVAQLLTLMDELTLDKTDGKPVIVI 330

Query: 551  AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME- 609
             ATNRPDS++ ALRR GR DREI ++              VP+  QR  IL A+   ++ 
Sbjct: 331  GATNRPDSLDSALRRAGRFDREICLN--------------VPNEEQRASILRAMTKNIKL 376

Query: 610  HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEF--E 667
            H     + + LS  T G+VGADL +L   A +  ++R                +FE   E
Sbjct: 377  HDETQFKYKELSKLTPGYVGADLKSLVTAAGIAAIKR----------------IFESLSE 420

Query: 668  GHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLL------SSSLPLRGTVSEIAD 721
             H +T LQ         E++ D ++       DL  + L       S      T+ +  D
Sbjct: 421  KHEETNLQ---------ENNVDSMEVDGTGADDLIDNQLLDNFSSKSDYEKLSTIKKFLD 471

Query: 722  NFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQR 781
               N +S         E+   L +   DF +A   ++P+A RE    VP V W+ VG   
Sbjct: 472  KHPNPLS--------KEQLEPLSITYEDFLQALPTIQPTAKREGFATVPDVTWQSVGALS 523

Query: 782  EVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVK 841
             ++ +L   +  P K  E + ++G   P+G+LM+GPPGC KTL+A+AVA+E+  NF++VK
Sbjct: 524  NIRMELHMCIVQPIKKPELYLKVGITAPSGVLMWGPPGCGKTLLAKAVANESRANFISVK 583

Query: 842  GPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQL 901
            GPEL +K+VGESE+AVR +F +ARA+ P IIFFDE+D L   R  +S     S RV++ L
Sbjct: 584  GPELLNKYVGESERAVRQVFQRARASIPCIIFFDELDALVPRR--DSSLSESSSRVVNTL 641

Query: 902  LVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR-- 959
            L ELDGL+ R  V VI ATNRPD IDPA+LRPGR D+ LY+  P+  +R EI +  +R  
Sbjct: 642  LTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPSAEERLEILKTLVRAN 701

Query: 960  KIPCSSDVNIRELA--CLSEGCTGADISLICREAAISAIE---------ENLDAS----- 1003
            + P S DVN++E+A        +GAD+S + +EA I A++         + LDAS     
Sbjct: 702  RTPLSKDVNLQEVANDMRCRNFSGADLSSLVKEAGIIALKKKFFKNQQIQELDASGFLEE 761

Query: 1004 -------RITMQHLKTAIRHVQPS 1020
                    I M     A+  ++PS
Sbjct: 762  DSPDSKVEIIMDDFNRALSSIKPS 785



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 127/236 (53%), Gaps = 11/236 (4%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P      +GG   + TQL+E +  P  H E +   G  PP G+L++GPPGC KT +A A+
Sbjct: 180 PNTNLASLGGLENITTQLLELIGLPILHPEIYTATGVEPPRGVLLYGPPGCGKTTIANAL 239

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  + F+ +  P + S   GESEK +R LF +A+  AP +IF DEID   AI  K   
Sbjct: 240 AGELQVPFINISAPSIVSGMSGESEKKLRELFEEAKTVAPCLIFMDEID---AITPKRDG 296

Query: 890 GVS--VSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           G    +  R+++QLL  +D L         V VI ATNRPD +D AL R GRFDR + + 
Sbjct: 297 GAQREMERRIVAQLLTLMDELTLDKTDGKPVIVIGATNRPDSLDSALRRAGRFDREICLN 356

Query: 944 PPNETDREEIFRIHLRKIPCSSDVNI--RELACLSEGCTGADISLICREAAISAIE 997
            PNE  R  I R   + I    +     +EL+ L+ G  GAD+  +   A I+AI+
Sbjct: 357 VPNEEQRASILRAMTKNIKLHDETQFKYKELSKLTPGYVGADLKSLVTAAGIAAIK 412


>gi|195375722|ref|XP_002046649.1| GJ12996 [Drosophila virilis]
 gi|194153807|gb|EDW68991.1| GJ12996 [Drosophila virilis]
          Length = 933

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 238/699 (34%), Positives = 377/699 (53%), Gaps = 90/699 (12%)

Query: 404  ATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
            A   +    +GG+      L +++I          LGL P++G+LLHGPPG GKT LAR 
Sbjct: 244  ARTSESFRDIGGMDGTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTYLARA 303

Query: 464  CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG 523
             A    + L  V   E++    GESE+ + +VF+ A  ++P V+FIDE+DAIA  R+   
Sbjct: 304  IAGQLKMPLLEVPATELIGGISGESEERIRDVFEQAIDNSPCVLFIDEIDAIAGNRQWAS 363

Query: 524  EELSQRMVATLLNLMDGVCRTD---GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
            +++ +R+V+ L+  +D +  T+    V+VIAAT RPD+++P LRR GR D EI I     
Sbjct: 364  KDMERRIVSQLITSLDQLKGTEFGQSVVVIAATTRPDTLDPGLRRIGRFDHEIAIH---- 419

Query: 581  FSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNE 638
                      +PS  +R EIL     G+    +D ++ Y  +A  T G+VGADL AL + 
Sbjct: 420  ----------IPSRKERREILRIQCEGLS---VDPKLNYDKIAELTPGYVGADLLALVSR 466

Query: 639  AALVCLRR-----YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDS 693
            AA + ++R     + ++  +S++  +T TL + E +     + +    +  + +    D 
Sbjct: 467  AATIAVKRRSMKKFRELHAASELNMTTVTLDDDEPNDPKPDEQAKKKTDDVDKASAETDK 526

Query: 694  ASPCTSDLPTS---------------LLSSSLPLR---------GTVSEI---------- 719
             S   +D P+S               +  +++P+            ++E           
Sbjct: 527  PSAEVADKPSSGAEKPEATNGEKANDVSEAAVPMEVEGKADAAPAKITEPEPKQQIETVA 586

Query: 720  -----ADNFH-------NGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
                 AD F+           D+    F     C   L L DF  A   ++PSA RE  +
Sbjct: 587  KSPVEADEFYEPTLAELTNFLDNPPEEFADPHFC---LTLDDFMAAIKVMQPSAKREGFI 643

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
             VP   W+D+G   +++ +L  AV  P K+ E   R+G   P+G+L+ GPPGC KTL+A+
Sbjct: 644  TVPDTTWDDIGSLHDIREELKLAVLAPVKYPEMLARLGLEAPSGVLLCGPPGCGKTLLAK 703

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            A+A+EAG+NF++VKGPEL + +VGESE+AVR+ F +AR +AP +IFFDE D L   R   
Sbjct: 704  AIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDG 763

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             DG +   R+++QLL E+DG+ +R  V V+AATNRPD IDPA+LRPGR D +LYVG P E
Sbjct: 764  GDGNNSGTRIVNQLLTEMDGVEERKGVYVLAATNRPDIIDPAILRPGRLDTILYVGLPQE 823

Query: 948  TDREEIFRIHLR--KIPC-SSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR 1004
             +R +I +   +  K P  + DVN  ELA  ++G TGAD++ + ++A++ ++ ++L+   
Sbjct: 824  QERVDILKATTKDGKRPVLADDVNFEELAAQTDGYTGADLAGLVKQASMFSLRQSLNNGN 883

Query: 1005 -------ITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
                   +  QH + A++ ++PS    +   Y++L  K+
Sbjct: 884  TKVDELCVCKQHFEEALKQLRPSVSEQDRKVYEKLRQKY 922



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/259 (38%), Positives = 144/259 (55%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V  T   DI  L  + +E  +   ++        L+ LGL    GVLL G
Sbjct: 635 PSAKREGFITVPDTTWDDIGSLHDIREELKLA--VLAPVKYPEMLARLGLEAPSGVLLCG 692

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A+++G+N  +V GPE+++   GESE+A+   F  A  SAP V+F DE
Sbjct: 693 PPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDE 752

Query: 512 LDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
            D++ P R DGG+      R+V  LL  MDGV    GV V+AATNRPD I+PA+ RPGRL
Sbjct: 753 FDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYVLAATNRPDIIDPAILRPGRL 812

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGF 627
           D       + L+         +P   +R++IL A     +  +L  +V +  L+  T G+
Sbjct: 813 D-------TILY-------VGLPQEQERVDILKATTKDGKRPVLADDVNFEELAAQTDGY 858

Query: 628 VGADLAALCNEAALVCLRR 646
            GADLA L  +A++  LR+
Sbjct: 859 TGADLAGLVKQASMFSLRQ 877



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 138/258 (53%), Gaps = 8/258 (3%)

Query: 751  EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
            E+ +++VR    +E+ +      + D+GG      +L E +    K  E + ++G  P  
Sbjct: 228  ERGQIRVR-KYKKELEIARTSESFRDIGGMDGTLKELCEML-IHIKSPEFYFQLGLLPSR 285

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            G+L+ GPPGC KT +ARA+A +  +  L V   EL     GESE+ +R +F +A  N+P 
Sbjct: 286  GLLLHGPPGCGKTYLARAIAGQLKMPLLEVPATELIGGISGESEERIRDVFEQAIDNSPC 345

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELD---GLHQRVNVTVIAATNRPDKID 927
            ++F DEID +A  R   S    +  R++SQL+  LD   G     +V VIAAT RPD +D
Sbjct: 346  VLFIDEIDAIAGNRQWASK--DMERRIVSQLITSLDQLKGTEFGQSVVVIAATTRPDTLD 403

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD-ISL 986
            P L R GRFD  + +  P+  +R EI RI    +     +N  ++A L+ G  GAD ++L
Sbjct: 404  PGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLLAL 463

Query: 987  ICREAAISAIEENLDASR 1004
            + R A I+    ++   R
Sbjct: 464  VSRAATIAVKRRSMKKFR 481


>gi|239946415|gb|ACS36235.1| cell division cycle protein 48 [Guillardia theta]
 gi|428164038|gb|EKX33080.1| CDC48-like protein [Guillardia theta CCMP2712]
          Length = 792

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 237/653 (36%), Positives = 350/653 (53%), Gaps = 125/653 (19%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG+ K+ A +++++ +         SLG++P KG+L++GPPG+GKT +AR  A+++G  
Sbjct: 199  IGGVRKQLAQIRELVELPLRHPQLFKSLGIKPPKGLLMYGPPGSGKTLIARAVANETGAF 258

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPE++S+  GESE  L + F  A ++AP+++FIDE+D+IAP R     E+ +R+V
Sbjct: 259  FFLINGPEIMSKMAGESEDNLRKAFAEAEKNAPSIIFIDEIDSIAPKRDKVNGEVERRIV 318

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+     ++V+AATNRP+SI+PALRR GR DRE++I               V
Sbjct: 319  SQLLTLMDGLKARSHIIVMAATNRPNSIDPALRRFGRFDREVDI--------------GV 364

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            P    R+E+L      M+ S  D  +E ++  THG+VGADLAALC EAAL C+R      
Sbjct: 365  PDETGRMEVLRIHTKNMKLS-DDVNLEQVARETHGYVGADLAALCTEAALQCIRE----- 418

Query: 652  TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
               DV+                L+D      + ES           ++D   + L S+ P
Sbjct: 419  -KMDVID---------------LEDETIDAEVLES--------MAVSNDHFRTALGSTNP 454

Query: 712  --LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
              LR TV E+     N   D  GG+       A K EL                      
Sbjct: 455  SALRETVVEVP----NVTWDDIGGL------EATKREL---------------------- 482

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
                      Q  V+  +M    +P++    F + G  P  G+L +GPPGC KTL+A+A+
Sbjct: 483  ----------QETVQYPVM----YPEQ----FAKFGMNPSRGVLFYGPPGCGKTLLAKAI 524

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA-AIRGKES 888
            A+E   NF+++KGPEL + W GESE  VR +F KAR +AP ++FFDE+D +A A      
Sbjct: 525  ANECQSNFISIKGPELLTMWFGESEANVREVFDKARQSAPCVLFFDELDSIARARGSSGG 584

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
            D     DRVM+QLL E+DG+ ++ NV +I ATNRPD IDPAL+RPGR D+L+Y+  P+  
Sbjct: 585  DAGGAGDRVMNQLLTEIDGVGEKKNVFIIGATNRPDIIDPALMRPGRLDQLVYIPLPDYA 644

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS----- 1003
             R +I +  LRK P + D++I E+A  +E  +GAD++ IC+ A   AI E+++ +     
Sbjct: 645  SRVDILKACLRKSPLAKDISIDEIARATEKFSGADLTEICQRACKYAIRESIEKTIRYKK 704

Query: 1004 ------------------RITMQHLKTAIRH----VQPSEIHSYKELSAKFQR 1034
                               IT  H + A+R     V  ++I  Y   S K Q+
Sbjct: 705  ELEARGEDVMEEDIDPVPEITKSHFEEAMRFARRSVSDADIRKYDMFSQKLQQ 757



 Score =  233 bits (594), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 119/267 (44%), Positives = 166/267 (62%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P +H + FK +G +PP G+LM+GPPG  KTL+ARAVA+
Sbjct: 194  VGYDDIGGVRKQLAQIRELVELPLRHPQLFKSLGIKPPKGLLMYGPPGSGKTLIARAVAN 253

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  FA+A  NAPSIIF DEID +A  R K +   
Sbjct: 254  ETGAFFFLINGPEIMSKMAGESEDNLRKAFAEAEKNAPSIIFIDEIDSIAPKRDKVNG-- 311

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DGL  R ++ V+AATNRP+ IDPAL R GRFDR + +G P+ET R 
Sbjct: 312  EVERRIVSQLLTLMDGLKARSHIIVMAATNRPNSIDPALRRFGRFDREVDIGVPDETGRM 371

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD---------- 1001
            E+ RIH + +  S DVN+ ++A  + G  GAD++ +C EAA+  I E +D          
Sbjct: 372  EVLRIHTKNMKLSDDVNLEQVARETHGYVGADLAALCTEAALQCIREKMDVIDLEDETID 431

Query: 1002 -----ASRITMQHLKTAIRHVQPSEIH 1023
                 +  ++  H +TA+    PS + 
Sbjct: 432  AEVLESMAVSNDHFRTALGSTNPSALR 458


>gi|366986953|ref|XP_003673243.1| hypothetical protein NCAS_0A02940 [Naumovozyma castellii CBS 4309]
 gi|342299106|emb|CCC66852.1| hypothetical protein NCAS_0A02940 [Naumovozyma castellii CBS 4309]
          Length = 857

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 233/605 (38%), Positives = 350/605 (57%), Gaps = 46/605 (7%)

Query: 409  DISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
            D++ LGG+    A L ++I    +   +  S G+ P +GVLLHGPPG GKTS+A   A +
Sbjct: 206  DLNSLGGMDDVIAQLMELIGLPILHPEIYLSTGVEPPRGVLLHGPPGCGKTSIANALAGE 265

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-EL 526
              V   +++ P VVS   GESE+ L E+F+ A   AP ++F DE+DAI P R  G + E+
Sbjct: 266  LKVPFISISAPSVVSGMSGESEKKLRELFEEAKSLAPCLMFFDEIDAITPKRDGGAQREM 325

Query: 527  SQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
             +R+VA LL  MD +   +T G  V+VI ATNRPDS++ ALRR GR DREI ++      
Sbjct: 326  ERRIVAQLLTSMDELSMEQTGGKPVIVIGATNRPDSLDAALRRAGRFDREICLN------ 379

Query: 583  LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAA 640
                    VP+   RL IL  + + ++   +D E+++L +A  T GFVGADL AL   A 
Sbjct: 380  --------VPNEVSRLHILKKMSNNLK---IDGEIDFLKLAKLTPGFVGADLKALTTAAG 428

Query: 641  LVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSD 700
               ++R    QT S +  +     EF    D M  D + S   TE+ +   DS     S 
Sbjct: 429  TCAIKRI--FQTYSTLTSNDSNTVEFSSE-DQMDIDQNESPVPTETGQQN-DSLINEQSL 484

Query: 701  LPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPS 760
              T+ +   LPL   + +   NF   ++D        E+   L ++  DF KA   ++P+
Sbjct: 485  KNTANMIDPLPL-SIIQKFIQNFPEPLND--------EQLAQLSIKYEDFLKALPTIQPT 535

Query: 761  AMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGC 820
            A RE    VP V W +VG   +V+ +L  A+  P K  E ++++G   P G+L++GPPGC
Sbjct: 536  AKREGFATVPDVTWANVGALGKVRVELNMAIVQPIKRPELYEKVGINAPAGVLLWGPPGC 595

Query: 821  SKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGL 880
             KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F +ARA+ P +IFFDE+D L
Sbjct: 596  GKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFTRARASVPCVIFFDELDAL 655

Query: 881  AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLL 940
               R  ++     S RV++ LL ELDGL+ R  + V+AATNRPD IDPA+LRPGR D+ +
Sbjct: 656  VPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIFVVAATNRPDMIDPAMLRPGRLDKTI 713

Query: 941  YVGPPNETDREEIFRIHLRK--IPCSSDVNIRELACLSEGC---TGADISLICREAAISA 995
            ++  PN  ++ +I     R    P +  V+ R++    E C   +GAD++ + RE+++ A
Sbjct: 714  FIELPNYEEKVDIITTVSRSSGTPLAEGVDFRKI-IQDERCRNFSGADLAALVRESSVLA 772

Query: 996  IEENL 1000
            ++ + 
Sbjct: 773  LKRSF 777


>gi|195492546|ref|XP_002094038.1| GE21612 [Drosophila yakuba]
 gi|194180139|gb|EDW93750.1| GE21612 [Drosophila yakuba]
          Length = 931

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 241/687 (35%), Positives = 373/687 (54%), Gaps = 86/687 (12%)

Query: 402  VQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
            VQ T E     +GG+      L +++I          LGL P++G+LLHGPPG GKT LA
Sbjct: 237  VQHTTES-FRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLA 295

Query: 462  RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
            R  +    + L  +   E++    GESE+ + EVF+ A   +P V+FIDE+DAI   R+ 
Sbjct: 296  RAISGQLKMPLLEIPATELIGGISGESEERIREVFEQAIGYSPCVLFIDEIDAIGGNRQW 355

Query: 522  GGEELSQRMVATLLNLMDGVCRTD---GVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
              +++ +R+V+ L++ +D +   +    V+VIAAT RPD ++P LRR GR D EI I   
Sbjct: 356  ASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIH-- 413

Query: 579  FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALC 636
                        +PS  +R EIL     G+    +D ++ Y  +A  T G+VGADL AL 
Sbjct: 414  ------------IPSRKERREILRIQCEGLS---IDPKLNYDKIAELTPGYVGADLMALV 458

Query: 637  NEAALVCLRR-----YSKIQTSSDVLHSTGTLFEFEGHSD-------TMLQDSDCSRNIT 684
            + AA V ++R     + ++  +S+   +T TL + E   +       T + DS+     T
Sbjct: 459  SRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPSEEAGEKAEQTTVADSNDKETAT 518

Query: 685  ESSRDCLDSASPCTSDLPTS---LLSSSLPLRGT------------------VSEIADNF 723
            ++  +        TSD   S   L  +  P + T                  V E+A+  
Sbjct: 519  DAEAEPKADGDKETSDKEKSEVELPKTETPEKVTNGKSPKKSPKKSTDAAMEVDEVANEE 578

Query: 724  HNGVS----DSSGGMFMSEKGCALK----------------LELVDFEKARMKVRPSAMR 763
               V     DSS   +       L                 L L+DF  A   ++PSA R
Sbjct: 579  PKKVVEQKVDSSNDEYYEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAIKVMQPSAKR 638

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E  + VP   W+D+G   +++ +L  AV  P K+ E  +R+G   P+G+L+ GPPGC KT
Sbjct: 639  EGFVTVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKT 698

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+A+A+EAG+NF++VKGPEL + +VGESE+AVR+ F +AR +AP +IFFDE D L   
Sbjct: 699  LLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPK 758

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            R    DG +   R+++QLL E+DG+ +R  V ++AATNRPD IDPA+LRPGR D +LYVG
Sbjct: 759  RSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVG 818

Query: 944  PPNETDREEIFRIHLR--KIPC-SSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             P +++R EI +   +  K P  + DV++ E+A  +EG TGAD++ + ++A++ ++ ++L
Sbjct: 819  FPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSL 878

Query: 1001 DASRITM-------QHLKTAIRHVQPS 1020
            +    ++       QH K A++ ++PS
Sbjct: 879  NNGDTSLDDLCVRSQHFKEALQQLRPS 905



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/259 (38%), Positives = 143/259 (55%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V  T   DI  L  + +E  +   ++        L  LGL    GVLL G
Sbjct: 634 PSAKREGFVTVPDTTWDDIGALEKIREELKLA--VLAPVKYPEMLERLGLTAPSGVLLCG 691

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A+++G+N  +V GPE+++   GESE+A+   F  A  SAP V+F DE
Sbjct: 692 PPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDE 751

Query: 512 LDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
            D++ P R DGG+      R+V  LL  MDGV    GV ++AATNRPD I+PA+ RPGRL
Sbjct: 752 FDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRL 811

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL--DSEVEYLSMATHGF 627
           D       + L+          P  ++R EIL A     +  +L  D +++ ++  T G+
Sbjct: 812 D-------TILY-------VGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGY 857

Query: 628 VGADLAALCNEAALVCLRR 646
            GADLA L  +A++  LR+
Sbjct: 858 TGADLAGLVKQASMFSLRQ 876


>gi|224010519|ref|XP_002294217.1| nuclear vcp-like-like protein [Thalassiosira pseudonana CCMP1335]
 gi|220970234|gb|EED88572.1| nuclear vcp-like-like protein [Thalassiosira pseudonana CCMP1335]
          Length = 605

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 245/658 (37%), Positives = 359/658 (54%), Gaps = 93/658 (14%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            LGG+S     ++++I    S       LG+ P +GVLL GPPG GKT LA+  A +  V+
Sbjct: 2    LGGVSSLLTTIRELIEYPLSHPELFLHLGVEPPRGVLLRGPPGCGKTHLAKAIAGELNVS 61

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG------EE 525
             F V+ PE+V    GESE  +  +F+SA++ APA++FIDE+DAIAP R +G       + 
Sbjct: 62   YFQVSAPELVGGVSGESELRVRTLFESAARYAPAIIFIDEIDAIAPKRGEGSGGGGGGKS 121

Query: 526  LSQRMVATLLNLMDGVCRTD-----GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
            + +R+VA LL  MD +   +      V+V+ ATNRPD+++PALRR GR DREI +     
Sbjct: 122  MEKRIVAQLLTSMDSIHPNNTRNQSAVIVLGATNRPDAMDPALRRAGRFDREIVL----- 176

Query: 581  FSLLKNSPAAVPSPAQRLEILHALLSGME-HSLLDSEVEYLSMATHGFVGADLAALCNEA 639
                       P    R  IL  + + M     LD +V  L+  T GFVGAD+ +L  EA
Sbjct: 177  ---------GAPDEKAREGILRVMTASMRVAGTLDYKV--LAKKTPGFVGADVRSLTKEA 225

Query: 640  ALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTS 699
            A++ + R  +    S+    T T    +G  ++M  D++ +             A P   
Sbjct: 226  AVLAINRIFRTDLLSESKKKTAT----DGEGESMEVDNEKA------------EAEPPKD 269

Query: 700  DLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRP 759
            D  ++ + +  PL  T  +                        L + + DF  A   V+P
Sbjct: 270  DGNSNDIRTITPLTDTQLQ-----------------------PLYITMDDFLTAIPHVQP 306

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            S+ RE    VP V W D+G   +++ +L  +V  P  H E F+ +G   P G+L++GPPG
Sbjct: 307  SSKREGFATVPDVSWNDIGALSDIREELTLSVLEPIAHPEKFEALGLPLPAGVLLYGPPG 366

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
            C KTL+A+A+A+E+G NF++VKGPEL  K+VGESE++VR +F +AR+++P IIFFDE+D 
Sbjct: 367  CGKTLLAKAIANESGANFISVKGPELLDKYVGESERSVRVVFERARSSSPCIIFFDELDS 426

Query: 880  LAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDR 938
            L   RG +   G  VS+RV++QLL E+DGL  R +V VIAATNRP+ IDPA+LRPGR D+
Sbjct: 427  LCPKRGSDGGGGGGVSERVVNQLLTEMDGLDSRRSVFVIAATNRPELIDPAMLRPGRLDK 486

Query: 939  LLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC--LSEGCTGADISLICREAAISAI 996
            LLYV  P+ TDR  I R    KI  + DV++  +A    S G +GAD + + REA ++ +
Sbjct: 487  LLYVPLPSPTDRLSILRALSTKIKLAPDVDLHAIANDPHSNGFSGADCAALLREAGLAVL 546

Query: 997  EENL-------DAS------------RITMQHLKTAIRHVQPSEIHSYKELSAKFQRL 1035
             + +       D +            +IT  H + A  HV PS     K+  A++ RL
Sbjct: 547  RDGVLNRTKDKDGNEVVDKKTEIKLLQITAYHFRYAFDHVLPS---VSKKDQARYDRL 601



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 9/247 (3%)

Query: 776  DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGL 835
            ++GG   + T + E +E+P  H E F  +G  PP G+L+ GPPGC KT +A+A+A E  +
Sbjct: 1    NLGGVSSLLTTIRELIEYPLSHPELFLHLGVEPPRGVLLRGPPGCGKTHLAKAIAGELNV 60

Query: 836  NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV---- 891
            ++  V  PEL     GESE  VR+LF  A   AP+IIF DEID +A  RG+ S G     
Sbjct: 61   SYFQVSAPELVGGVSGESELRVRTLFESAARYAPAIIFIDEIDAIAPKRGEGSGGGGGGK 120

Query: 892  SVSDRVMSQLLVELDGLH-----QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            S+  R+++QLL  +D +H      +  V V+ ATNRPD +DPAL R GRFDR + +G P+
Sbjct: 121  SMEKRIVAQLLTSMDSIHPNNTRNQSAVIVLGATNRPDAMDPALRRAGRFDREIVLGAPD 180

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRIT 1006
            E  RE I R+    +  +  ++ + LA  + G  GAD+  + +EAA+ AI        ++
Sbjct: 181  EKAREGILRVMTASMRVAGTLDYKVLAKKTPGFVGADVRSLTKEAAVLAINRIFRTDLLS 240

Query: 1007 MQHLKTA 1013
                KTA
Sbjct: 241  ESKKKTA 247



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/310 (35%), Positives = 160/310 (51%), Gaps = 36/310 (11%)

Query: 343 PADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNV 402
           P D  N      +T   D +     I  +  +   P +   SK  REG        F  V
Sbjct: 267 PKDDGNSNDIRTITPLTDTQLQPLYITMDDFLTAIPHVQPSSK--REG--------FATV 316

Query: 403 QATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLAR 462
                 DI  L  + +E  +   ++   +      +LGL    GVLL+GPPG GKT LA+
Sbjct: 317 PDVSWNDIGALSDIREELTL--SVLEPIAHPEKFEALGLPLPAGVLLYGPPGCGKTLLAK 374

Query: 463 LCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--- 519
             A++SG N  +V GPE++ +  GESE+++  VF+ A  S+P ++F DELD++ P R   
Sbjct: 375 AIANESGANFISVKGPELLDKYVGESERSVRVVFERARSSSPCIIFFDELDSLCPKRGSD 434

Query: 520 KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSF 579
             GG  +S+R+V  LL  MDG+     V VIAATNRP+ I+PA+ RPGRLD+ + + +  
Sbjct: 435 GGGGGGVSERVVNQLLTEMDGLDSRRSVFVIAATNRPELIDPAMLRPGRLDKLLYVPL-- 492

Query: 580 LFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGFVGADLAAL 635
                       PSP  RL IL AL + ++   L  +V+  ++A    ++GF GAD AAL
Sbjct: 493 ------------PSPTDRLSILRALSTKIK---LAPDVDLHAIANDPHSNGFSGADCAAL 537

Query: 636 CNEAALVCLR 645
             EA L  LR
Sbjct: 538 LREAGLAVLR 547


>gi|70995044|ref|XP_752288.1| AAA family ATPase/60S ribosome export protein Rix7 [Aspergillus
            fumigatus Af293]
 gi|66849923|gb|EAL90250.1| AAA family ATPase/60S ribosome export protein Rix7, putative
            [Aspergillus fumigatus Af293]
 gi|159131044|gb|EDP56157.1| AAA family ATPase/60S ribosome export protein Rix7, putative
            [Aspergillus fumigatus A1163]
          Length = 784

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 239/632 (37%), Positives = 348/632 (55%), Gaps = 80/632 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGGL      L D++I    +     S  ++P +GVLLHGPPG GKT +A   A + 
Sbjct: 219  LADLGGLDDVIQSLGDLLILPMTRPQVFVSSNVQPPRGVLLHGPPGCGKTMIANAFAAEL 278

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV    ++ P +VS   GESE+AL E F+ A + AP ++FIDE+DAI P R+    E+ +
Sbjct: 279  GVPFIPISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKRESAQREMEK 338

Query: 529  RMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  MD +   +TDG  V+V+AATNRPDS++ ALRR GR D+EI +         
Sbjct: 339  RIVAQLLTCMDDLALDKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINM--------- 389

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VPS   R +IL AL   M  +  D + + L+  T GFVGADL  L + A    +
Sbjct: 390  -----TVPSEPVREQILRALTRKMRLAD-DLDFKTLAKRTPGFVGADLNDLVSTAGSAAI 443

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
            +RY ++  S+     +G   + E                       LD  SP   +L   
Sbjct: 444  KRYLELLKSN-----SGEEMDIED----------------------LDDLSPKVKEL--- 473

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
                    R  ++   +     + D +  +F+S           DF  A  K++PS+ RE
Sbjct: 474  --------RRLINHAKET---PLGDETQTVFVSN---------ADFFTALPKIQPSSKRE 513

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
                +P   W D+G   +++ +L  A+    K  E +  +G   PTG+L++GPPGC KTL
Sbjct: 514  GFATIPDTTWADIGALGQIREELNTAIVDAIKSPELYANVGITAPTGVLLWGPPGCGKTL 573

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E+  NF++VKGPEL +K+VGESE+AVR +F +AR++ P IIFFDE+D L   R
Sbjct: 574  LAKAVANESRANFISVKGPELLNKFVGESERAVRQVFVRARSSVPCIIFFDELDALVPRR 633

Query: 885  GKESDGVS-VSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
                D +S  S RV++ LL ELDGL   R  + VIAATNRPD IDPA+LRPGR + LLYV
Sbjct: 634  ---DDALSEASARVVNTLLTELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLETLLYV 690

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              PN  +R EI +  +RK+P   + ++R LA   EG +GAD+  + R A  SAI+     
Sbjct: 691  SLPNPLERVEILKTLVRKLPIEFNEDMRRLAEECEGFSGADLGSLLRRAGYSAIKRR--- 747

Query: 1003 SRITMQHLKTAIRHVQPS--EIHSYKELSAKF 1032
             +I+ +    A   ++PS  ++  Y++L  ++
Sbjct: 748  DQISFEDFVAAKAFIRPSVTDLKKYEKLRREW 779



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/294 (36%), Positives = 158/294 (53%), Gaps = 33/294 (11%)

Query: 360 DHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKE 419
           D     FV N +    L P +   SK  REG        F  +  T   DI  LG + +E
Sbjct: 487 DETQTVFVSNADFFTAL-PKIQPSSK--REG--------FATIPDTTWADIGALGQIREE 535

Query: 420 YAILKDIIISSSVKST--LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNG 477
                +  I  ++KS    +++G+    GVLL GPPG GKT LA+  A++S  N  +V G
Sbjct: 536 L----NTAIVDAIKSPELYANVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKG 591

Query: 478 PEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNL 537
           PE++++  GESE+A+ +VF  A  S P ++F DELDA+ P R D   E S R+V TLL  
Sbjct: 592 PELLNKFVGESERAVRQVFVRARSSVPCIIFFDELDALVPRRDDALSEASARVVNTLLTE 651

Query: 538 MDGVCRT-DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ 596
           +DG+  +  G+ VIAATNRPD I+PA+ RPGRL+       + L+        ++P+P +
Sbjct: 652 LDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLE-------TLLY-------VSLPNPLE 697

Query: 597 RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           R+EIL  L+  +     + ++  L+    GF GADL +L   A    ++R  +I
Sbjct: 698 RVEILKTLVRKLPIE-FNEDMRRLAEECEGFSGADLGSLLRRAGYSAIKRRDQI 750



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 133/234 (56%), Gaps = 6/234 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V   D+GG  +V   L + +  P    + F     +PP G+L+ GPPGC KT++A A A+
Sbjct: 217  VSLADLGGLDDVIQSLGDLLILPMTRPQVFVSSNVQPPRGVLLHGPPGCGKTMIANAFAA 276

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G+ F+ +  P + S   GESEKA+R  F +A+  AP +IF DEID +   R  ES   
Sbjct: 277  ELGVPFIPISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKR--ESAQR 334

Query: 892  SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++QLL  +D L         V V+AATNRPD +D AL R GRFD+ + +  P+E
Sbjct: 335  EMEKRIVAQLLTCMDDLALDKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSE 394

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              RE+I R   RK+  + D++ + LA  + G  GAD++ +   A  +AI+  L+
Sbjct: 395  PVREQILRALTRKMRLADDLDFKTLAKRTPGFVGADLNDLVSTAGSAAIKRYLE 448


>gi|148228613|ref|NP_001079582.1| nuclear VCP-like [Xenopus laevis]
 gi|28278757|gb|AAH44980.1| MGC52979 protein [Xenopus laevis]
          Length = 854

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 239/624 (38%), Positives = 337/624 (54%), Gaps = 78/624 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +G LLHGPPG GKT LA+  A +  + +  V   E+VS   GESEQ L E+FD 
Sbjct: 289  LGVVPPRGFLLHGPPGCGKTLLAQAIAGELDMPILKVAATEMVSGVSGESEQKLRELFDQ 348

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP ++FIDE+D+I P R+   +++ +R+VA LL  MD    +  T  VLVI ATNR
Sbjct: 349  AVSSAPCILFIDEIDSITPKREVASKDMERRIVAQLLTCMDDLNSLAVTTQVLVIGATNR 408

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P    R  IL  L   ++   L  
Sbjct: 409  PDSLDPALRRAGRFDREICL--------------GIPDEGARKRILQTLCRKLK---LPE 451

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
              ++  +A  T G+VGADL ALC EAA +C      IQ       +   + E +     +
Sbjct: 452  PFDFCRLAHLTPGYVGADLMALCREAA-MCAVNRVLIQIKDQQATTEAAVEETDPQPGAV 510

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPT--SLLSSSLPLRGTVSEIADNFHNGVSDSS 731
               ++              + +P  ++L    +LL    PL    +E+            
Sbjct: 511  ALQAEKQ------------TTAPAQNELHRLLALLQEQTPL--PEAEL------------ 544

Query: 732  GGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
                      +L +E+ DF  A   V+PSA RE    VP V W D+G   E++ +L  A+
Sbjct: 545  ---------LSLCIEMDDFLGALPMVQPSAKREGFATVPDVTWADIGALEEIREELTMAI 595

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ E FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VG
Sbjct: 596  LAPVRNPEQFKALGLMAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 655

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +A  ++P +IFFDEID L   R     G SV  RV++QLL E+DGL  R
Sbjct: 656  ESERAVRQVFQRATNSSPCVIFFDEIDALCPRRSGHDSGASV--RVVNQLLTEMDGLESR 713

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVN 968
              V ++AATNRPD IDPA+LRPGR D+ LYVG P   DR  I +   +   + P  +DVN
Sbjct: 714  RQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPADRFAILKTITKDGTRPPLEADVN 773

Query: 969  IRELA--CLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIH-SY 1025
            +  +A     +  TGAD+S + REA+ISA+           Q +     H  P +I  S 
Sbjct: 774  LETIASDVRCDCFTGADLSALVREASISALR----------QEMLVQEPHTNPGQIKVSQ 823

Query: 1026 KELSAKFQRLVHSNAEADESGYQL 1049
            +     F ++  S ++ D+  Y+L
Sbjct: 824  RNFEEAFNKVKPSVSKKDQLMYEL 847



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 154/282 (54%), Gaps = 15/282 (5%)

Query: 768  EVPKV-----KWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            +VP+V     ++ED+GG  +   ++ + +    +H E ++ +G  PP G L+ GPPGC K
Sbjct: 249  KVPEVQHSSLRFEDIGGNEDTLKEVCKMM-IHMRHPEVYQHLGVVPPRGFLLHGPPGCGK 307

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL+A+A+A E  +  L V   E+ S   GESE+ +R LF +A ++AP I+F DEID +  
Sbjct: 308  TLLAQAIAGELDMPILKVAATEMVSGVSGESEQKLRELFDQAVSSAPCILFIDEIDSITP 367

Query: 883  IRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRL 939
             R  E     +  R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR 
Sbjct: 368  KR--EVASKDMERRIVAQLLTCMDDLNSLAVTTQVLVIGATNRPDSLDPALRRAGRFDRE 425

Query: 940  LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN 999
            + +G P+E  R+ I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+   
Sbjct: 426  ICLGIPDEGARKRILQTLCRKLKLPEPFDFCRLAHLTPGYVGADLMALCREAAMCAVNRV 485

Query: 1000 LDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVH 1037
            L   +      + A+    P      + + K+ +A  Q  +H
Sbjct: 486  LIQIKDQQATTEAAVEETDPQPGAVALQAEKQTTAPAQNELH 527



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/264 (37%), Positives = 143/264 (54%), Gaps = 21/264 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 563 PSAKREGFATVPDVTWADIGALEEIREELTMA--ILAPVRNPEQFKALGLMAPAGVLLAG 620

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A+ S+P V+F DE
Sbjct: 621 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRATNSSPCVIFFDE 680

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R       S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 681 IDALCPRRSGHDSGASVRVVNQLLTEMDGLESRRQVFIMAATNRPDIIDPAILRPGRLDK 740

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGF 627
            + +               +P PA R  IL  +        L+++V   ++A+      F
Sbjct: 741 TLYV--------------GLPPPADRFAILKTITKDGTRPPLEADVNLETIASDVRCDCF 786

Query: 628 VGADLAALCNEAALVCLRRYSKIQ 651
            GADL+AL  EA++  LR+   +Q
Sbjct: 787 TGADLSALVREASISALRQEMLVQ 810


>gi|405118074|gb|AFR92849.1| helicase [Cryptococcus neoformans var. grubii H99]
          Length = 749

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 247/677 (36%), Positives = 352/677 (51%), Gaps = 95/677 (14%)

Query: 409  DISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
            D+  LGGL  +   L +I   +     +    G+   KGVLLHG PG GKT L R  A +
Sbjct: 80   DLGALGGLQPQITQLLEIAALALFHPEIYLHTGVPRPKGVLLHGVPGGGKTQLVRCLAGE 139

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
              +   +V+ P +VS   GESE+ L + FD A + AP ++F+DE+DAI P R++   E+ 
Sbjct: 140  IKLPFISVSAPSIVSGMSGESEKTLRDTFDEAKKIAPCILFLDEVDAITPKRENAQREME 199

Query: 528  QRMVATLLNLMDGVCRTD-GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +R+VA LL  MD +  ++  V++I ATNRPDS++PALRR GR D EIE+           
Sbjct: 200  RRIVAQLLTCMDDLAASEEPVIIIGATNRPDSLDPALRRAGRFDHEIEM----------- 248

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                VP       IL  L S +  S  D +   L+ AT G++GADL AL  EA ++ ++R
Sbjct: 249  ---GVP-------ILKVLCSKLRLSG-DVDFRQLAKATPGYIGADLTALTTEAGVIAVKR 297

Query: 647  Y--SKIQTSSDVLHST--GTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDL- 701
               S    S+D   S+  GT+ E +G +   +   D          D     +P    L 
Sbjct: 298  IFDSGTGNSTDPAASSEQGTISEPDGAAMEAMAIDDRDTPFANLPEDV--KKTPIAKFLI 355

Query: 702  --PTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRP 759
              PT+L S  L                                + L   DF  A   V+P
Sbjct: 356  SHPTALTSDQL------------------------------STISLTPADFLAALKIVQP 385

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            SA RE    +P V W D+G   + + +L  A+  P +H E F  +G   P+G+L++GPPG
Sbjct: 386  SAKREGFATIPDVTWSDIGALSQTRDELHMAIVQPIRHPELFSVVGIDAPSGVLLWGPPG 445

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
            C KTL+A+AVA+E+  NF++VKGPEL +K+VGESE+AVR +FA+AR+++P +IFFDE+D 
Sbjct: 446  CGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFARARSSSPCVIFFDELDA 505

Query: 880  LAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDR 938
            L   R    D +S S  RV++ LL ELDGL  R  V VI ATNRPD IDPA++RPGR D+
Sbjct: 506  LVPRR---DDSMSESSARVVNTLLTELDGLDARKAVYVIGATNRPDMIDPAMVRPGRLDK 562

Query: 939  LLYVGPPNETDREEIFRIHLRKIPCSSDV--NIRELACLS--EGCTGADISLICR----- 989
            LLYV  P+ ++R EI + H +K P S D    I+E+      +G +GADI+ + R     
Sbjct: 563  LLYVDLPSPSERFEILKTHTKKTPISDDSWQAIKEIVASDKCDGFSGADIAALVREAATL 622

Query: 990  ----------------EAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
                            EA    +E   D+ R+T +H   A +   PS     +E   K++
Sbjct: 623  ALRAALESIGAFEAPAEAEPEGVERKTDSVRVTAEHFARAAQKTLPS---VSREQRLKYE 679

Query: 1034 RLVHSNAEADESGYQLR 1050
            R+    A     G + R
Sbjct: 680  RMRDKYAGVPTRGRRQR 696


>gi|296803659|ref|XP_002842682.1| ribosome biogenesis ATPase RIX7 [Arthroderma otae CBS 113480]
 gi|238846032|gb|EEQ35694.1| ribosome biogenesis ATPase RIX7 [Arthroderma otae CBS 113480]
          Length = 743

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 232/632 (36%), Positives = 351/632 (55%), Gaps = 78/632 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            ++ LGG+      L+++I+    +  + SS  ++P +GVLLHGPPG GKT +A   A + 
Sbjct: 175  LADLGGVDDIIQQLEELIVLPMTRPQIFSSSNVQPPRGVLLHGPPGCGKTMIANAFAAEL 234

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV    ++ P ++S   GESE+AL + F+ A + AP ++F+DE+DAI P R+    E+ +
Sbjct: 235  GVPFIAISAPSIISGMSGESEKALRDHFEEAKKVAPCLIFMDEIDAITPKRESAQREMEK 294

Query: 529  RMVATLLNLMD--GVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  MD   + +TDG  V+V+AATNRPDS++PALRR GR D+EI +         
Sbjct: 295  RIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINL--------- 345

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VP+   R +IL  L   M  +  D + ++L+  T GFVGADL  L + AA   +
Sbjct: 346  -----TVPNEPVREQILRTLTKDMNLAD-DLDFKFLAKGTAGFVGADLNDLVSTAATAAI 399

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
            +RY       D+L +          ++ M        +I E                P  
Sbjct: 400  KRYL------DLLKT--------APAEEM--------DIEEEQ-------------APNG 424

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
            +    L LR  +    +  H    ++   +++S +         DF  A  K++PS+ RE
Sbjct: 425  VSKKVLELRQLIKRARETPH----EADPQIYVSNE---------DFLVALPKIQPSSKRE 471

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
                +P   W D+G    V+ +L+ A+  P ++ E + R+G   PTG+L++GPPGC KTL
Sbjct: 472  GFATIPATTWADIGSLGSVREELVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTL 531

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F++AR++ P +IFFDE+D L   R
Sbjct: 532  LAKAVANESRANFISIKGPELLNKYVGESERAVRQVFSRARSSIPCVIFFDELDALVPRR 591

Query: 885  GKESDGVS-VSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
                D +S  S RV++ LL ELDGL   R  + VIAATNRPD IDPA+LRPGR + LL+V
Sbjct: 592  ---DDTMSEASARVVNTLLTELDGLGSSRNGIYVIAATNRPDIIDPAMLRPGRLETLLFV 648

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              P   +R E+ R  +RK+P      + ELA   EG +GAD+  + R A  SAI+     
Sbjct: 649  NLPGRDERAEVLRTLIRKLPIEMTEQLVELARSCEGFSGADLGSLLRRAGYSAIKRK--- 705

Query: 1003 SRITMQHLKTAIRHVQPS--EIHSYKELSAKF 1032
              I  +    A + ++PS  ++  Y+ L   +
Sbjct: 706  DTIRFEDFVAAKQEIRPSVTDMKKYESLKKDW 737



 Score =  166 bits (419), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/234 (39%), Positives = 136/234 (58%), Gaps = 6/234 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V   D+GG  ++  QL E +  P    + F     +PP G+L+ GPPGC KT++A A A+
Sbjct: 173  VSLADLGGVDDIIQQLEELIVLPMTRPQIFSSSNVQPPRGVLLHGPPGCGKTMIANAFAA 232

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G+ F+A+  P + S   GESEKA+R  F +A+  AP +IF DEID +   R  ES   
Sbjct: 233  ELGVPFIAISAPSIISGMSGESEKALRDHFEEAKKVAPCLIFMDEIDAITPKR--ESAQR 290

Query: 892  SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++QLL  +D L         V V+AATNRPD +DPAL R GRFD+ + +  PNE
Sbjct: 291  EMEKRIVAQLLTCMDDLALAKTDGKPVIVLAATNRPDSLDPALRRGGRFDKEINLTVPNE 350

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              RE+I R   + +  + D++ + LA  + G  GAD++ +   AA +AI+  LD
Sbjct: 351  PVREQILRTLTKDMNLADDLDFKFLAKGTAGFVGADLNDLVSTAATAAIKRYLD 404



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 159/293 (54%), Gaps = 29/293 (9%)

Query: 361 HESNAFV-INHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKE 419
           HE++  + +++E  +   P +   SK  REG        F  + AT   DI  LG + +E
Sbjct: 444 HEADPQIYVSNEDFLVALPKIQPSSK--REG--------FATIPATTWADIGSLGSVREE 493

Query: 420 YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPE 479
             ++  I+         S +G+    GVLL GPPG GKT LA+  A++S  N  ++ GPE
Sbjct: 494 --LVTAIVEPIRNPEIYSRVGISAPTGVLLWGPPGCGKTLLAKAVANESRANFISIKGPE 551

Query: 480 VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD 539
           ++++  GESE+A+ +VF  A  S P V+F DELDA+ P R D   E S R+V TLL  +D
Sbjct: 552 LLNKYVGESERAVRQVFSRARSSIPCVIFFDELDALVPRRDDTMSEASARVVNTLLTELD 611

Query: 540 GVCRT-DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL 598
           G+  + +G+ VIAATNRPD I+PA+ RPGRL+       + LF  L       P   +R 
Sbjct: 612 GLGSSRNGIYVIAATNRPDIIDPAMLRPGRLE-------TLLFVNL-------PGRDERA 657

Query: 599 EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           E+L  L+  +   + +  VE L+ +  GF GADL +L   A    ++R   I+
Sbjct: 658 EVLRTLIRKLPIEMTEQLVE-LARSCEGFSGADLGSLLRRAGYSAIKRKDTIR 709


>gi|409048405|gb|EKM57883.1| hypothetical protein PHACADRAFT_251778 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 769

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 254/688 (36%), Positives = 373/688 (54%), Gaps = 87/688 (12%)

Query: 414  GGLSKEYAI----LKDII-ISSSVKSTLSSL-------------GLRPTKGVLLHGPPGT 455
            GG++K+YA     L D+  I S V+  L  +             G++P +GVLLHGPPG 
Sbjct: 98   GGIAKDYAPPSTRLSDLGGIESCVEKMLELVAMPLCHPEVYIHTGVQPPRGVLLHGPPGC 157

Query: 456  GKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAI 515
            GKT LA   A + GV   +V+ P VVS   GESE+ L + F+ A + AP ++FIDE+DAI
Sbjct: 158  GKTLLAHAIAGELGVPFISVSAPSVVSGMSGESEKTLRDTFEEAKRVAPCLLFIDEIDAI 217

Query: 516  APARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDR 571
             P R+    E+ +R+VA  L  MD +   +TD   V+VI ATNRPDS++ ALRR GR D 
Sbjct: 218  TPKRESAQREMERRIVAQFLTCMDDMSWDKTDNRPVIVIGATNRPDSLDAALRRAGRFDH 277

Query: 572  EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVG 629
            EI +               VP    R +IL  L S +    L+ + ++L++A  T G+VG
Sbjct: 278  EISM--------------GVPDDEARTQILRVLSSRLR---LEGDFDFLALAKATPGYVG 320

Query: 630  ADLAALCNEAALVCLRR-YSKIQTSSDVL-HSTGTLFEFEGHSDTMLQDSDCSRNITESS 687
            ADLAAL   A ++ ++R + ++     VL  +  +  + +G S   +  +     +  SS
Sbjct: 321  ADLAALTGAAGIIAVKRIFQRVSEGGLVLPEAVQSKLDLDGDSSMAIDGA----VVPISS 376

Query: 688  RDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLEL 747
                +   P  S +       SLP     S I  +F     D         +   L + +
Sbjct: 377  VPAGNLTPPTQSSMRVPFSDISLPSNSPASSIV-HFLRAHPDP----LTEAQLVPLCITM 431

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
             DF  A  +V+PS+ RE    VP V W D+G     + +L  A+  P +  E F  +G  
Sbjct: 432  SDFLAALKQVQPSSKREGFATVPDVTWADIGALHATREELHMAIVQPIRRPELFSAVGIE 491

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
               G+L++GPPGC KTL+A+AVA+E+  NF++VKGPEL +K+VGESE+AVR +F++ARA+
Sbjct: 492  AACGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFSRARAS 551

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
            +P +IFFDE+D L   R    D +S S  RV++ LL ELDGL  R +V VIAATNRPD I
Sbjct: 552  SPCVIFFDELDALVPRR---DDSMSESSARVVNTLLTELDGLDARKSVYVIAATNRPDMI 608

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC----SSDVNIRE-----LACLSE 977
            DPA+ RPGR D+LLYV  P+  +R EI R  +RK+P     ++   +RE     +    +
Sbjct: 609  DPAMCRPGRLDKLLYVDLPSTDERAEIMRTVIRKVPLGELGATYECVRERVEALVRTRCD 668

Query: 978  GCTGADISLICREAAISAIEENLDA---------------SRITMQ--HLKTAIRHVQPS 1020
            G +GAD++ + REA ++A++  L A               + IT++    + A+  VQPS
Sbjct: 669  GYSGADLAAVVREAGVAALKRTLGALDAMEGDGHALPEGETGITVRLADFERALEKVQPS 728

Query: 1021 ----EIHSYKELSAKFQRL-VHSNAEAD 1043
                +   Y+ L ++F  L V +  E D
Sbjct: 729  VSVAQRRKYEALRSRFAGLPVRAGREED 756


>gi|198418753|ref|XP_002130650.1| PREDICTED: similar to nuclear VCP-like [Ciona intestinalis]
          Length = 779

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/628 (37%), Positives = 338/628 (53%), Gaps = 117/628 (18%)

Query: 437  SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
            S+LG+ P +G+LLHGPPG GKT L    A   G+ L  + GPE++    GESEQ + +VF
Sbjct: 239  SALGVSPPRGILLHGPPGCGKTLLGNAIAGQLGIPLLRLVGPELIGGVSGESEQRIRDVF 298

Query: 497  DSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCR-TDGVLVIAATNR 555
            + A Q+AP V+F+DE+D IA  R++  +++ +R+VA LL+ +D   + +  VLV+ ATNR
Sbjct: 299  EIAQQTAPCVLFLDEVDVIAQRRENSSKDMERRVVAQLLSCLDDFNKDSQQVLVVGATNR 358

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            P+ ++PALRR GR DREI +               +P  + R +IL  L   M+ S  D 
Sbjct: 359  PEVLDPALRRSGRFDREIML--------------GIPDESAREKILKVLSQKMKLSD-DV 403

Query: 616  EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
                ++  T GFVGAD+ +LC EAA+         QT + VL+   T  E    S+ +L 
Sbjct: 404  NFGLIARLTPGFVGADILSLCREAAM---------QTVARVLNINKTNTE----SNILL- 449

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
                         D L + SP T                                     
Sbjct: 450  -------------DWLSNRSPVTD------------------------------------ 460

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
              E+   + +E  DFE+A   V+PS+ RE    VP V W+DVG   +V+ +L  A+  P 
Sbjct: 461  --EQLELMAIETSDFEEALCVVQPSSKREGFATVPDVTWDDVGALTDVREELSIAILGPV 518

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            ++  AF  +G    +G+L+ GPPGC KTL+A+A+A+E+G+NF++VKGPEL + +VGESE+
Sbjct: 519  RNPMAFASLGLSRASGVLLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESER 578

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            AVR  F +AR +AP ++FFDE+D L   R     G S   RV++Q+L ELDGL  R  V 
Sbjct: 579  AVRQCFERARNSAPCVVFFDELDSLCPRRTSAESGASA--RVVNQMLTELDGLESRKQVF 636

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR--KIPCSSDVNIRELA 973
            V+AATNRPD IDPA+LRPGR D++LYVG P   DR +I R   +  K P      + E  
Sbjct: 637  VVAATNRPDIIDPAILRPGRLDKVLYVGIPTTEDRIQILRTITKNGKKPL-----LDEAV 691

Query: 974  CLSE--------GCTGADISLICREAAISAI---------------EENLDASRITMQHL 1010
            CLS         G TGAD+S + REA++ AI               + N  + +IT+ ++
Sbjct: 692  CLSNLGADDRCSGFTGADLSALMREASLDAIRGSVNHGWNVVLPQSDNNFHSIKITLVNI 751

Query: 1011 KTAIRHVQPSEIHS----YKELSAKFQR 1034
              A + V+PS        Y+E+  KF +
Sbjct: 752  NAAFKKVKPSVSEQDRLLYEEMKRKFTK 779



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 142/239 (59%), Gaps = 4/239 (1%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V + DV G ++   +L   +     H E +  +G  PP GIL+ GPPGC KTL+  A+A
Sbjct: 209  QVSFVDVAGNQDALNELARLL-LHMCHPEVYSALGVSPPRGILLHGPPGCGKTLLGNAIA 267

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
             + G+  L + GPEL     GESE+ +R +F  A+  AP ++F DE+D +A  R  E+  
Sbjct: 268  GQLGIPLLRLVGPELIGGVSGESEQRIRDVFEIAQQTAPCVLFLDEVDVIAQRR--ENSS 325

Query: 891  VSVSDRVMSQLLVELDGLHQ-RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
              +  RV++QLL  LD  ++    V V+ ATNRP+ +DPAL R GRFDR + +G P+E+ 
Sbjct: 326  KDMERRVVAQLLSCLDDFNKDSQQVLVVGATNRPEVLDPALRRSGRFDREIMLGIPDESA 385

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQ 1008
            RE+I ++  +K+  S DVN   +A L+ G  GADI  +CREAA+  +   L+ ++   +
Sbjct: 386  REKILKVLSQKMKLSDDVNFGLIARLTPGFVGADILSLCREAAMQTVARVLNINKTNTE 444



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 165/323 (51%), Gaps = 48/323 (14%)

Query: 329 SEISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLR 388
           +E +I L   +N+ P  +T+E+ +    E+ D E    V+   +K              R
Sbjct: 443 TESNILLDWLSNRSP--VTDEQLELMAIETSDFEEALCVVQPSSK--------------R 486

Query: 389 EGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLS--SLGLRPTKG 446
           EG        F  V      D+  L  + +E +I     I   V++ ++  SLGL    G
Sbjct: 487 EG--------FATVPDVTWDDVGALTDVREELSI----AILGPVRNPMAFASLGLSRASG 534

Query: 447 VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 506
           VLL GPPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ + F+ A  SAP V
Sbjct: 535 VLLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQCFERARNSAPCV 594

Query: 507 VFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRP 566
           VF DELD++ P R       S R+V  +L  +DG+     V V+AATNRPD I+PA+ RP
Sbjct: 595 VFFDELDSLCPRRTSAESGASARVVNQMLTELDGLESRKQVFVVAATNRPDIIDPAILRP 654

Query: 567 GRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH- 625
           GRLD+ + +               +P+   R++IL  +    +  LLD  V   ++    
Sbjct: 655 GRLDKVLYV--------------GIPTTEDRIQILRTITKNGKKPLLDEAVCLSNLGADD 700

Query: 626 ---GFVGADLAALCNEAALVCLR 645
              GF GADL+AL  EA+L  +R
Sbjct: 701 RCSGFTGADLSALMREASLDAIR 723


>gi|150865535|ref|XP_001384792.2| AAA ATPase [Scheffersomyces stipitis CBS 6054]
 gi|149386791|gb|ABN66763.2| AAA ATPase [Scheffersomyces stipitis CBS 6054]
          Length = 832

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 241/645 (37%), Positives = 352/645 (54%), Gaps = 78/645 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGGL      L ++I    +   + +S G+ P +GVLL+GPPG GKT++A   A + 
Sbjct: 191  LSSLGGLDSTTTQLMELIGLPILHPEIYTSTGVEPPRGVLLYGPPGCGKTTIANALAGEL 250

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELS 527
             V    ++ P +VS   GESE+ L E+FD A   AP ++F+DE+DAI P R  G + E+ 
Sbjct: 251  QVPFINISAPSIVSGMSGESEKKLREIFDEAKTLAPCIIFMDEIDAITPKRDGGAQREME 310

Query: 528  QRMVATLLNLMD--GVCRTDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            +R+VA LL LMD   + +T+  V+V+ ATNRPDS++ ALRR GR DREI ++        
Sbjct: 311  RRIVAQLLTLMDELSLGKTEKPVIVVGATNRPDSLDAALRRAGRFDREICLN-------- 362

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  VP+  +RL IL  + S ++    D     L+  T G+VGADL +L   A +  +
Sbjct: 363  ------VPNEDERLSILKKMTSNIKLENGDFNFRELAKMTPGYVGADLKSLVTAAGISAI 416

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSAS--PCTSDLP 702
            +R                +FE        L  +D + N  +S    +DSA+  P    L 
Sbjct: 417  KR----------------IFESLSEQQEELLVADSNANSFDSMD--VDSATFIPDNQSLV 458

Query: 703  TSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAM 762
                 +      T+ +      N +SD        E+   L +   DF +A   V+P+A 
Sbjct: 459  KFEGKTDTEKLSTIQKFLIKHPNPLSD--------EQLNPLAISYSDFLEALPTVQPTAK 510

Query: 763  REVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            RE    VP V W+ VG   +V+ +L   V  P K  E + ++G   P G+LM+GPPGC K
Sbjct: 511  REGFATVPDVTWKSVGALHKVRMELHMCVVQPIKKPELYLKVGITAPAGVLMWGPPGCGK 570

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F++ARA+ P IIFFDE+D L  
Sbjct: 571  TLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFSRARASIPCIIFFDELDALVP 630

Query: 883  IRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
             R  ++     S RV++ LL ELDGL+ R  V VI ATNRPD IDPA+LRPGR D+ LY+
Sbjct: 631  RR--DASLSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYI 688

Query: 943  GPPNETDREEIFR--IHLRKIPCSSDVNIRELA----CLSEGCTGADISLICREAAISAI 996
              P+  +R EI +  I+  K P S DV++  +A    C     +GAD+S + REA + A+
Sbjct: 689  ELPSAEERLEILKTLINANKTPVSVDVDLNSIANDNRC--RNFSGADLSSLVREAGVLAL 746

Query: 997  E---------ENLDAS------------RITMQHLKTAIRHVQPS 1020
            +         ++LDAS             +T Q    A+ +V PS
Sbjct: 747  KKKFFQNQKIDDLDASGYYENENVDDQVEVTQQDFNRALSNVHPS 791



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/234 (40%), Positives = 129/234 (55%), Gaps = 9/234 (3%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P +    +GG     TQLME +  P  H E +   G  PP G+L++GPPGC KT +A A+
Sbjct: 187 PSLTLSSLGGLDSTTTQLMELIGLPILHPEIYTSTGVEPPRGVLLYGPPGCGKTTIANAL 246

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  + F+ +  P + S   GESEK +R +F +A+  AP IIF DEID   AI  K   
Sbjct: 247 AGELQVPFINISAPSIVSGMSGESEKKLREIFDEAKTLAPCIIFMDEID---AITPKRDG 303

Query: 890 GVS--VSDRVMSQLLVELDGL---HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
           G    +  R+++QLL  +D L        V V+ ATNRPD +D AL R GRFDR + +  
Sbjct: 304 GAQREMERRIVAQLLTLMDELSLGKTEKPVIVVGATNRPDSLDAALRRAGRFDREICLNV 363

Query: 945 PNETDREEIFRIHLRKIPCSS-DVNIRELACLSEGCTGADISLICREAAISAIE 997
           PNE +R  I +     I   + D N RELA ++ G  GAD+  +   A ISAI+
Sbjct: 364 PNEDERLSILKKMTSNIKLENGDFNFRELAKMTPGYVGADLKSLVTAAGISAIK 417


>gi|403215874|emb|CCK70372.1| hypothetical protein KNAG_0E01040 [Kazachstania naganishii CBS 8797]
          Length = 785

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/655 (35%), Positives = 356/655 (54%), Gaps = 106/655 (16%)

Query: 407  EQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCA 465
            E ++  LGG+    A L ++I +         + G+ P +GVLLHGPPG GKTS+A   A
Sbjct: 168  ETNLQSLGGMDDVVAQLMELIGLPILHPEIFETTGIDPPRGVLLHGPPGCGKTSIANALA 227

Query: 466  HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE- 524
             +  V   +V+ P VVS   GESE+ + ++F+ A Q AP ++F DE+DAI P R  G + 
Sbjct: 228  GELKVPFISVSAPSVVSGMSGESEKKIRDLFEEAQQIAPCLIFFDEIDAITPKRDGGAQR 287

Query: 525  ELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
            E+ +R+VA LL  MD +   +T G  V+VI ATNRPDS++ ALRR GR DREI ++    
Sbjct: 288  EMEKRIVAQLLTSMDELTLQKTGGKPVIVIGATNRPDSLDAALRRAGRFDREICLN---- 343

Query: 581  FSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNE 638
                      VP+   RL IL  L S ++   LD E+++L +A  T GFVGADL AL   
Sbjct: 344  ----------VPNEVSRLHILKKLSSTLK---LDGEIDFLQLAKLTPGFVGADLKALITA 390

Query: 639  AALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCT 698
            A    ++R                +FE    SDTM  D D            L + +   
Sbjct: 391  AGTCAIKR----------------IFEHSVVSDTMEVDRDTE----------LKNTANMI 424

Query: 699  SDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVR 758
            + LP S+          +     N+   ++D+        +   L ++  DF KA   ++
Sbjct: 425  NPLPLSV----------IQRFIQNYPEPLNDT--------ELQTLSIKYEDFLKALPTIQ 466

Query: 759  PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
            P+A RE    VP V W ++G    V+ +L  A+  P K  E ++++G   P G+L++GPP
Sbjct: 467  PTAKREGFATVPDVTWNNIGALSNVRLELNMAIVQPIKRPELYEKVGINAPAGVLLWGPP 526

Query: 819  GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
            GC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F +ARA+ P +IFFDE+D
Sbjct: 527  GCGKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFTRARASIPCVIFFDELD 586

Query: 879  GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDR 938
             L   R  ++     S RV++ LL ELDGL+ R  + VI ATNRPD IDPA+LRPGR D+
Sbjct: 587  ALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDK 644

Query: 939  LLYVGPPNETDREEIFRIHLRK--IPCSSDVN----IRELACLSEGCTGADISLICREAA 992
             +++  P + ++ +I +  LR    P + D++    I +  C  +  +GAD++ + RE++
Sbjct: 645  TIFIELPTKEEKLDILQTLLRSNGTPVAHDIDFAEIINDFRC--QNFSGADLAALVRESS 702

Query: 993  ISA--------------IEENLDASR-------------ITMQHLKTAIRHVQPS 1020
            +SA              ++ NLD                +TM+  + A++ ++PS
Sbjct: 703  VSALKRSFFKTDELQSVVDNNLDKEFEDLSVGVSDEHIIVTMKDFQRALQKIKPS 757



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 135/243 (55%), Gaps = 9/243 (3%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+   + +GG  +V  QLME +  P  H E F+  G  PP G+L+ GPPGC KT +A A+
Sbjct: 167  PETNLQSLGGMDDVVAQLMELIGLPILHPEIFETTGIDPPRGVLLHGPPGCGKTSIANAL 226

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E  + F++V  P + S   GESEK +R LF +A+  AP +IFFDEID   AI  K   
Sbjct: 227  AGELKVPFISVSAPSVVSGMSGESEKKIRDLFEEAQQIAPCLIFFDEID---AITPKRDG 283

Query: 890  GVS--VSDRVMSQLLVELDGLH-QRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            G    +  R+++QLL  +D L  Q+     V VI ATNRPD +D AL R GRFDR + + 
Sbjct: 284  GAQREMEKRIVAQLLTSMDELTLQKTGGKPVIVIGATNRPDSLDAALRRAGRFDREICLN 343

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
             PNE  R  I +     +    +++  +LA L+ G  GAD+  +   A   AI+   + S
Sbjct: 344  VPNEVSRLHILKKLSSTLKLDGEIDFLQLAKLTPGFVGADLKALITAAGTCAIKRIFEHS 403

Query: 1004 RIT 1006
             ++
Sbjct: 404  VVS 406


>gi|302784052|ref|XP_002973798.1| hypothetical protein SELMODRAFT_640 [Selaginella moellendorffii]
 gi|300158130|gb|EFJ24753.1| hypothetical protein SELMODRAFT_640 [Selaginella moellendorffii]
          Length = 494

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 218/264 (82%), Gaps = 3/264 (1%)

Query: 737 SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
           +E   +L +   DFE AR K+RPSAMREVILEVPKV+W D+GGQ  VK QL E VEWP K
Sbjct: 231 TESASSLSVGREDFELAREKIRPSAMREVILEVPKVRWSDIGGQSAVKQQLKEIVEWPHK 290

Query: 797 HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
           HQ++F RIGT PP G+L++GPPGCSKT+MARAVA+E GLNF+AVKGPELFSKWVGESEKA
Sbjct: 291 HQDSFARIGTTPPRGVLLYGPPGCSKTMMARAVAAETGLNFIAVKGPELFSKWVGESEKA 350

Query: 857 VRSLFAKARANAPSIIFFDEIDGLAAIR---GKESDGVSVSDRVMSQLLVELDGLHQRVN 913
           VR+LFA+A+A APS++FFDEIDGLA  R   G  +DG+SV DRVMSQLL+E+DG+  R  
Sbjct: 351 VRALFARAKAAAPSVVFFDEIDGLAVTRSSGGGGTDGISVEDRVMSQLLIEMDGVSPRNG 410

Query: 914 VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELA 973
           V+VIAATNRPDK+DPALLRPGRFDRL+YVGPP++  R++IF IH++  PC +DV++  LA
Sbjct: 411 VSVIAATNRPDKLDPALLRPGRFDRLIYVGPPDKAARQQIFEIHMKNTPCKADVSVDVLA 470

Query: 974 CLSEGCTGADISLICREAAISAIE 997
             +E  TGADI+ +CREAA++A+E
Sbjct: 471 SYTESYTGADIAAVCREAALAALE 494



 Score =  259 bits (662), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 138/245 (56%), Positives = 177/245 (72%), Gaps = 15/245 (6%)

Query: 411 SKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S LGGL++E   LK+I+  S +K  TL+   L+ TKGVLL+GPPGTGKTSLA+  A ++G
Sbjct: 3   SSLGGLAEEIETLKEIVQYSLLKPETLARYCLKRTKGVLLYGPPGTGKTSLAQAVAKEAG 62

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           V +  +NGPE+V++ +GESE A+  +FDSA++ AP+VVFIDELDAI P R++G E L QR
Sbjct: 63  VKMLVINGPEIVTEYHGESEAAMKAIFDSAAREAPSVVFIDELDAITPQRREGSEGLGQR 122

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ATLL  MDGV   +GVLVIAATNRP+SI+PALRR GR D EIEI             A
Sbjct: 123 LMATLLTSMDGV-HQNGVLVIAATNRPESIDPALRRHGRFDYEIEI-------------A 168

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
            VP+P  RLEIL   LS ++H+L   +V+ L+ ATHGFVGADL+ALCNEAAL  LRR+  
Sbjct: 169 GVPTPKGRLEILQVHLSRLKHTLSSEDVQALASATHGFVGADLSALCNEAALGALRRHVH 228

Query: 650 IQTSS 654
            +T S
Sbjct: 229 SKTES 233



 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 140/229 (61%), Gaps = 5/229 (2%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  +GG  E    L E V++     E   R   +   G+L++GPPG  KT +A+AVA EA
Sbjct: 2    YSSLGGLAEEIETLKEIVQYSLLKPETLARYCLKRTKGVLLYGPPGTGKTSLAQAVAKEA 61

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            G+  L + GPE+ +++ GESE A++++F  A   APS++F DE+D +   R + S+G  +
Sbjct: 62   GVKMLVINGPEIVTEYHGESEAAMKAIFDSAAREAPSVVFIDELDAITPQRREGSEG--L 119

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV-GPPNETDREE 952
              R+M+ LL  +DG+HQ   V VIAATNRP+ IDPAL R GRFD  + + G P    R E
Sbjct: 120  GQRLMATLLTSMDGVHQN-GVLVIAATNRPESIDPALRRHGRFDYEIEIAGVPTPKGRLE 178

Query: 953  IFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            I ++HL ++  + S  +++ LA  + G  GAD+S +C EAA+ A+  ++
Sbjct: 179  ILQVHLSRLKHTLSSEDVQALASATHGFVGADLSALCNEAALGALRRHV 227



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 132/240 (55%), Gaps = 21/240 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG S     LK+I+      + + + +G  P +GVLL+GPPG  KT +AR  A ++G
Sbjct: 269 SDIGGQSAVKQQLKEIVEWPHKHQDSFARIGTTPPRGVLLYGPPGCSKTMMARAVAAETG 328

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE----- 524
           +N   V GPE+ S+  GESE+A+  +F  A  +AP+VVF DE+D +A  R  GG      
Sbjct: 329 LNFIAVKGPELFSKWVGESEKAVRALFARAKAAAPSVVFFDEIDGLAVTRSSGGGGTDGI 388

Query: 525 ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            +  R+++ LL  MDGV   +GV VIAATNRPD ++PAL RPGR DR I +         
Sbjct: 389 SVEDRVMSQLLIEMDGVSPRNGVSVIAATNRPDKLDPALLRPGRFDRLIYV--------- 439

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                  P  A R +I    +        D  V+ L+  T  + GAD+AA+C EAAL  L
Sbjct: 440 -----GPPDKAARQQIFEIHMKNTPCK-ADVSVDVLASYTESYTGADIAAVCREAALAAL 493


>gi|331242462|ref|XP_003333877.1| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309312867|gb|EFP89458.1| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 795

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/619 (37%), Positives = 352/619 (56%), Gaps = 59/619 (9%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            GL+P +G+LL GPPG GKT LA   A+  GV L  V+   +VS   GESE+A+ ++F+ A
Sbjct: 171  GLKPIRGLLLCGPPGCGKTMLANAIANQLGVRLINVSSTSIVSGMSGESEKAIRDIFEQA 230

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
            ++ AP ++FIDE+DAI P R+    E+ +R+VA LL  +D +   +TDG  V+VI ATNR
Sbjct: 231  TKQAPCLLFIDEIDAITPKRETAQREMERRIVAQLLTCLDDLSLEKTDGKPVIVIGATNR 290

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR D EI +               VP  A R +IL  L S ++  L+DS
Sbjct: 291  PDSLDPALRRGGRFDHEILM--------------GVPDEAAREQILRVLCSKLK--LVDS 334

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFE---GHSD 671
             + + L+ +T G+VGADL AL   A ++ ++R  +  T  D L     + +        D
Sbjct: 335  FDYKQLARSTPGYVGADLTALTASAGVIAIKRIFEPDTKPDKLPDDNMIIDLTDSPAKED 394

Query: 672  TMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSS 731
             ++ ++D      E+        +    +LP+ LLS  LP+         NF      S+
Sbjct: 395  LLVVETDVPNQEQEAP------PADIFENLPSHLLS--LPII--------NFLR----SN 434

Query: 732  GGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
                 S++   +++  +DFE+A  +++PS  RE    +P   W  +G    V+ +L  ++
Sbjct: 435  PRKLNSQQLDRIRINQLDFERALNELQPSCKREGFSTIPDTTWSQIGAMHSVRDELNISI 494

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P ++ E F++IG     G+L++GPPGC KTL+A+AVA+E+  NF++VKGPEL +K+VG
Sbjct: 495  IQPIRYPEMFEKIGISSSFGVLLWGPPGCGKTLVAKAVANESQANFISVKGPELLNKYVG 554

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQ 910
            ESEKAVR +F +ARA+AP IIFFDE+D L   R    D +S  S RV++ LL ELDGL  
Sbjct: 555  ESEKAVRQVFIRARASAPCIIFFDELDALVPRR---DDSLSESSSRVVNTLLTELDGLEP 611

Query: 911  RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN-- 968
            R  + VI ATNRPD +DPA++RPGR D+++++  P+  DR EIF+    K+   S  +  
Sbjct: 612  RKQIYVIGATNRPDVMDPAMVRPGRLDKMIFIDLPDRQDRWEIFKTLSSKLTFDSPASEA 671

Query: 969  IRELACLSEGC---TGADISLICREAAISAIEEN------LDASRITMQHLKTAIRHVQP 1019
            I++L      C   +GADI  + REAA+  + +       LD +     HL+T     + 
Sbjct: 672  IQKLIQDDPRCAGYSGADIGGLIREAALIQLRKQIRNRTLLDPTGDRPHHLETQTTQEES 731

Query: 1020 SEIHSYKELSAKFQRLVHS 1038
              I  ++E  AK +  V S
Sbjct: 732  LGIADFEEALAKVRPSVSS 750



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 91/252 (36%), Positives = 138/252 (54%), Gaps = 6/252 (2%)

Query: 750 FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
           F  ++    PS+   +    P V   D+GG      +L+E +  P  H E F+  G +P 
Sbjct: 116 FSNSKQSGNPSSSSLIKDTTPSVTLSDLGGIDGTVERLLELIGLPILHPEIFEFTGLKPI 175

Query: 810 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
            G+L+ GPPGC KT++A A+A++ G+  + V    + S   GESEKA+R +F +A   AP
Sbjct: 176 RGLLLCGPPGCGKTMLANAIANQLGVRLINVSSTSIVSGMSGESEKAIRDIFEQATKQAP 235

Query: 870 SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDK 925
            ++F DEID +   R  E+    +  R+++QLL  LD L         V VI ATNRPD 
Sbjct: 236 CLLFIDEIDAITPKR--ETAQREMERRIVAQLLTCLDDLSLEKTDGKPVIVIGATNRPDS 293

Query: 926 IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADIS 985
           +DPAL R GRFD  + +G P+E  RE+I R+   K+      + ++LA  + G  GAD++
Sbjct: 294 LDPALRRGGRFDHEILMGVPDEAAREQILRVLCSKLKLVDSFDYKQLARSTPGYVGADLT 353

Query: 986 LICREAAISAIE 997
            +   A + AI+
Sbjct: 354 ALTASAGVIAIK 365


>gi|156086698|ref|XP_001610758.1| cell division control protein 48 [Babesia bovis T2Bo]
 gi|154798011|gb|EDO07190.1| cell division control protein 48, putative [Babesia bovis]
          Length = 804

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 236/603 (39%), Positives = 335/603 (55%), Gaps = 99/603 (16%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG  ++ A ++++I +         +LG++P +GVLL+GPPG+GKT +AR  A+++G  
Sbjct: 216  IGGCRRQMAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTLIARAVANETGAY 275

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPEV+S+  GE+E  L   F  A ++APA++FIDE+D+IAP R+    E+ +R+V
Sbjct: 276  FFLINGPEVMSKMAGEAESNLRRAFAEAEKNAPAIIFIDEVDSIAPKREKTNGEVERRVV 335

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+     V+VIAATNR +SI+PALRR GR D+EI+I               V
Sbjct: 336  SQLLTLMDGLKGRGQVVVIAATNRQNSIDPALRRFGRFDKEIDI--------------GV 381

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR-RYSKI 650
            P    RLEIL      M+ +  + ++E L+  +HGFVGADLA LC EAAL C+R +   I
Sbjct: 382  PDDTGRLEILKIHTRNMKLA-PEVKLEELAANSHGFVGADLAQLCTEAALGCIREKMGAI 440

Query: 651  QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSL 710
                D +             DT + D   S  +T+   +   + + C    P+S      
Sbjct: 441  DLEEDTI-------------DTAILD---SMAVTQEHFNA--AIATCN---PSS------ 473

Query: 711  PLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVP 770
             LR TV EI     N   D  GG           LE V           +++RE+IL   
Sbjct: 474  -LRETVVEIP----NVKWDDIGG-----------LESVK----------NSLREMIL--- 504

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
                                  +P +H E F++ G  P  G+L +GPPGC KTL+A+AVA
Sbjct: 505  ----------------------YPIEHPEKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 542

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESD 889
            SE   NF+++KGPEL + W GESE  VR +F KAR +AP ++FFDE+D + A R G   +
Sbjct: 543  SECSANFISIKGPELLTMWFGESEANVREVFDKARTSAPCVLFFDELDSIGAARSGGAGE 602

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G    DRVM+QLL E+DG+  + N+  I ATNRP+ +D ALLRPGR D+L+Y+  P+   
Sbjct: 603  GTVAGDRVMNQLLTEIDGVSAKKNIFFIGATNRPNLLDEALLRPGRLDQLIYIPLPDLPA 662

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQH 1009
            R  I    LRK P + +V I  LA  + G +GAD++ +C+ AA SAI    DA     +H
Sbjct: 663  RVSILNALLRKSPVADNVPISYLAQKTAGFSGADLAEMCQIAARSAIR---DAIAYEEKH 719

Query: 1010 LKT 1012
             KT
Sbjct: 720  GKT 722



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 160/267 (59%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R    Q+ E +E P +H   FK +G +PP G+L++GPPG  KTL+ARAVA+
Sbjct: 211  VGYDDIGGCRRQMAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTLIARAVAN 270

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GE+E  +R  FA+A  NAP+IIF DE+D +A  R K +   
Sbjct: 271  ETGAYFFLINGPEVMSKMAGEAESNLRRAFAEAEKNAPAIIFIDEVDSIAPKREKTNG-- 328

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV+SQLL  +DGL  R  V VIAATNR + IDPAL R GRFD+ + +G P++T R 
Sbjct: 329  EVERRVVSQLLTLMDGLKGRGQVVVIAATNRQNSIDPALRRFGRFDKEIDIGVPDDTGRL 388

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN------------ 999
            EI +IH R +  + +V + ELA  S G  GAD++ +C EAA+  I E             
Sbjct: 389  EILKIHTRNMKLAPEVKLEELAANSHGFVGADLAQLCTEAALGCIREKMGAIDLEEDTID 448

Query: 1000 ---LDASRITMQHLKTAIRHVQPSEIH 1023
               LD+  +T +H   AI    PS + 
Sbjct: 449  TAILDSMAVTQEHFNAAIATCNPSSLR 475



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 139/271 (51%), Gaps = 27/271 (9%)

Query: 380 LNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISS-SVKSTLSS 438
            NA   +    +L    +E  NV+         +GGL      L+++I+           
Sbjct: 462 FNAAIATCNPSSLRETVVEIPNVK------WDDIGGLESVKNSLREMILYPIEHPEKFEK 515

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G+ P++GVL +GPPG GKT LA+  A +   N  ++ GPE+++  +GESE  + EVFD 
Sbjct: 516 FGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDK 575

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEE---LSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A  SAP V+F DELD+I  AR  G  E      R++  LL  +DGV     +  I ATNR
Sbjct: 576 ARTSAPCVLFFDELDSIGAARSGGAGEGTVAGDRVMNQLLTEIDGVSAKKNIFFIGATNR 635

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P+ ++ AL RPGRLD+ I I +              P    R+ IL+ALL   +  + D+
Sbjct: 636 PNLLDEALLRPGRLDQLIYIPL--------------PDLPARVSILNALLR--KSPVADN 679

Query: 616 -EVEYLSMATHGFVGADLAALCNEAALVCLR 645
             + YL+  T GF GADLA +C  AA   +R
Sbjct: 680 VPISYLAQKTAGFSGADLAEMCQIAARSAIR 710


>gi|296004694|ref|XP_966179.2| cell division cycle protein 48 homologue, putative [Plasmodium
           falciparum 3D7]
 gi|225631753|emb|CAG25009.2| cell division cycle protein 48 homologue, putative [Plasmodium
           falciparum 3D7]
          Length = 828

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 227/581 (39%), Positives = 318/581 (54%), Gaps = 98/581 (16%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A ++++I +         +LG++P +GVLL+GPPG+GKT +AR  A+++G  
Sbjct: 209 IGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAF 268

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPEV+S+  GE+E  L   F+ A +++PA++FIDE+D+IAP R+    E+ +R+V
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVV 328

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VIAATNR +SI+PALRR GR DREI+I               V
Sbjct: 329 SQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDI--------------GV 374

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           P    R EIL      M+ S  D ++E L+  THGFVGADLA LC EAAL C+R      
Sbjct: 375 PDDNGRFEILRIHTKNMKLS-PDVKLEELASNTHGFVGADLAQLCTEAALTCIRE----- 428

Query: 652 TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
              DV+                L+D    + + ES   C+      T D     L +  P
Sbjct: 429 -KMDVID---------------LEDEIIDKEVLESM--CV------TQDHFNMALGTCNP 464

Query: 712 --LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
             LR TV E+     N   D  GG+   +                     S +RE+IL  
Sbjct: 465 SSLRETVVEVP----NVKWDDIGGLDEVK---------------------STLREMIL-- 497

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
                                  +P  H + F++ G  P  G+L +GPPGC KTL+A+AV
Sbjct: 498 -----------------------YPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAV 534

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-S 888
           ASE   NF+++KGPEL + W GESE  VR +F KARA AP ++FFDE+D +   RG    
Sbjct: 535 ASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLG 594

Query: 889 DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
           DG    DRVM+QLL E+DG+  + N+  I ATNRP+ +D ALLRPGR D+L+Y+  P+  
Sbjct: 595 DGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLG 654

Query: 949 DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            R  I    LRK P + +V I  LA  + G +GAD++ +C+
Sbjct: 655 ARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQ 695



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 107/232 (46%), Positives = 152/232 (65%), Gaps = 2/232 (0%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++D+GG ++   Q+ E +E P +H   FK +G +PP G+L++GPPG  KT +ARAVA
Sbjct: 203  EIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVA 262

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GE+E  +R  F +A  N+P+IIF DEID +A  R K ++G
Sbjct: 263  NETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREK-TNG 321

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV+SQLL  +DG+  R  V VIAATNR + IDPAL R GRFDR + +G P++  R
Sbjct: 322  -EVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGR 380

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
             EI RIH + +  S DV + ELA  + G  GAD++ +C EAA++ I E +D 
Sbjct: 381  FEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDV 432


>gi|254585551|ref|XP_002498343.1| ZYRO0G08008p [Zygosaccharomyces rouxii]
 gi|238941237|emb|CAR29410.1| ZYRO0G08008p [Zygosaccharomyces rouxii]
          Length = 826

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/639 (36%), Positives = 349/639 (54%), Gaps = 96/639 (15%)

Query: 438  SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
            S G+ P +GVLLHGPPG GKTS+A   A +  V   +++ P VVS   GESE+ + ++FD
Sbjct: 220  STGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFLSISAPSVVSGMSGESEKKIRDLFD 279

Query: 498  SASQSAPAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMD--GVCRTDG--VLVIA 551
             A   AP ++F DE+DAI P R DGG   E+ +R+VA LL  MD   + +T G  V+VI 
Sbjct: 280  EARSLAPCLMFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELNMEKTGGKPVIVIG 338

Query: 552  ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
            ATNRPDS++ ALRR GR DREI ++              VP+   R+ IL  L   ++  
Sbjct: 339  ATNRPDSLDAALRRAGRFDREICLN--------------VPNELSRVHILKKLAQNLK-- 382

Query: 612  LLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGH 669
             +D E++++ +A  T GFVGADL AL   A    ++R       S +  +T    + +  
Sbjct: 383  -IDGEIDFIKLAKLTPGFVGADLKALITAAGTCAIKRIFHAYAYSSI--ATDNKMDIDQD 439

Query: 670  SDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSD 729
            ++   +D    +N                    T+ +   LPL   + +   NF   ++D
Sbjct: 440  TENKDEDEKSLKN--------------------TANMIDPLPL-TIIQKFIQNFPEPLND 478

Query: 730  SSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLME 789
                    E+   L ++  DF KA   ++P+A RE    VP V W  VG   +V+ +L  
Sbjct: 479  --------EQLSNLSIQYEDFLKALPTIQPTAKREGFATVPDVTWASVGALTKVRVELNM 530

Query: 790  AVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKW 849
            A+  P K  E ++++G   P G+L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+
Sbjct: 531  AIVQPIKKPELYEKVGISAPAGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKY 590

Query: 850  VGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLH 909
            VGESE+A+R +F +ARA+ P +IFFDE+D L   R  +S     S RV++ LL ELDGL+
Sbjct: 591  VGESERAIRQVFTRARASVPCVIFFDELDALVPRR--DSTLSESSSRVVNTLLTELDGLN 648

Query: 910  QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDV 967
             R  + V+ ATNRPD IDPA+LRPGR D+ L++  PN  ++ +I +  +R    P SSDV
Sbjct: 649  DRRGIFVVGATNRPDMIDPAMLRPGRLDKTLFIELPNAEEKLDILKTLVRTNGTPMSSDV 708

Query: 968  NIRELACLSEGC---TGADISLICREAAI--------------SAIEENLDAS------- 1003
            ++ E     + C   +GADI+ + RE+++              S +E NLD         
Sbjct: 709  DL-ETVIADDRCKNFSGADIASLVRESSVLALKRSFFKNDQVQSVVENNLDKEFEDLSVA 767

Query: 1004 ------RITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
                   +TM     A+R V+PS    +   Y++LS K 
Sbjct: 768  YPSEEILVTMSDFVNALRKVRPSVSDKDRLKYEKLSNKL 806


>gi|426333921|ref|XP_004028514.1| PREDICTED: nuclear valosin-containing protein-like [Gorilla gorilla
            gorilla]
          Length = 867

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 261/719 (36%), Positives = 363/719 (50%), Gaps = 134/719 (18%)

Query: 345  DLTNERSQPQ--VTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNA-----QI 397
            DL++E+S P+  VTE  D + ++ +                S   R+G L N      + 
Sbjct: 189  DLSDEKSNPKKPVTEIQDSKDSSLL---------------ESDMKRKGKLKNKGSKRKKE 233

Query: 398  EFQNVQATVE---QDISKLGGLSKEYAILK-------DIIISSSVK--------STLSSL 439
            + Q V   +E   Q  +K  GL  + + +K       D+ +    K             L
Sbjct: 234  DLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHL 293

Query: 440  GLRPTKGVLLHGPPGTGKTSLARL-------------CAHD-SGVN-------------L 472
            G+ P +GVLLHGPPG GKT LA               C+ D SG N             +
Sbjct: 294  GVVPPRGVLLHGPPGCGKTLLAHAIAGAECSGMITAHCSFDFSGSNDPPASASQELDLPI 353

Query: 473  FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVA 532
              V  PE+VS   GESEQ L E+F+ A  +AP ++FIDE+DAI P R+   +++ +R+VA
Sbjct: 354  LKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVA 413

Query: 533  TLLNLMD---GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
             LL  MD    V  T  VLVI ATNRPDS++PALRR GR DREI +              
Sbjct: 414  QLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICL-------------- 459

Query: 590  AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRY 647
             +P  A R  IL  L   +    L    ++  +A  T GFVGADL ALC EAA+  + R 
Sbjct: 460  GIPDEASRERILQTLCRKLR---LPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR- 515

Query: 648  SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLS 707
                           L + +                           +P   DLP+  + 
Sbjct: 516  --------------VLMKLQEQQ----------------------KKNPEMEDLPSKGVQ 539

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVI 766
                     SE  D     +        +SE+    L +EL DF  A   V+PSA RE  
Sbjct: 540  EERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGF 599

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            + VP V W D+G   +++ +L  A+  P ++ + FK +G   P G+L+ GPPGC KTL+A
Sbjct: 600  VTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLA 659

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+E+GLNF++VKGPEL + +VGESE+AVR +F +A+ +AP +IFFDE+D L   R  
Sbjct: 660  KAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSD 719

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               G SV  RV++QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ L+VG P 
Sbjct: 720  RETGASV--RVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPP 777

Query: 947  ETDREEIFRIHLR---KIPCSSDVNIRELAC-LSEGC-TGADISLICREAAISAIEENL 1000
              DR  I +   +   K P  +DVN+  +A  L   C TGAD+S + REA+I A+ + +
Sbjct: 778  PADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEM 836



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 592 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 649

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 650 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 709

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 710 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 769

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 770 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 815

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 816 TGADLSALVREASICALRQEMARQKSGN 843


>gi|50307971|ref|XP_453984.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643119|emb|CAG99071.1| KLLA0E00837p [Kluyveromyces lactis]
          Length = 814

 Score =  371 bits (953), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 227/606 (37%), Positives = 344/606 (56%), Gaps = 75/606 (12%)

Query: 409  DISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
            ++S LGG+    A L ++I    +   + S+ G+ P +GVLLHGPPG GKTS+A   A +
Sbjct: 197  NLSTLGGMDDVIAQLMELIGLPILHPEIYSATGVEPPRGVLLHGPPGCGKTSIANALAGE 256

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG--EE 525
              V   +++ P VVS   GESE+ + E+FD A   AP +VF DE+DAI P R DGG   E
Sbjct: 257  LQVPFISISAPSVVSGMSGESEKKIRELFDEAKSLAPCLVFFDEIDAITPKR-DGGAQRE 315

Query: 526  LSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
            + +R+VA LL  MD +   + +G  V+VI ATNRPDS++ ALRR GR DREI ++     
Sbjct: 316  MERRIVAQLLTSMDELSFEKMEGKPVIVIGATNRPDSLDAALRRAGRFDREICLN----- 370

Query: 582  SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEA 639
                     VP+   R  IL  + S ++   +D E++++ +A  T GFVGADL AL   A
Sbjct: 371  ---------VPNETSRYFILKKMASSLK---IDGEIDFIKLAKLTPGFVGADLKALITAA 418

Query: 640  ALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTS 699
                ++R                   F+ ++ +    +D   +I   +   L + +    
Sbjct: 419  GTCAIKRI------------------FQNYAGS----NDVDMDIDIDAETQLKNTANMID 456

Query: 700  DLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRP 759
             LP S+          +    DNF + ++        +E+   L ++  DF KA   ++P
Sbjct: 457  PLPLSI----------IQRFIDNFPDALT--------AEQLQGLFIKYEDFLKALPTIQP 498

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            +A RE    VP V W  VG   +++ +L  A+  P K  E ++++G   P G+L++GPPG
Sbjct: 499  TAKREGFATVPDVTWSSVGALDKIRIELNMAIVQPIKRPELYEKVGISAPAGVLLWGPPG 558

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
            C KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F +ARA+ P IIFFDE+D 
Sbjct: 559  CGKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFNRARASVPCIIFFDELDA 618

Query: 880  LAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            L   R  ++     S RV++ LL ELDGL+ R  + V+ ATNRPD IDPA+LRPGR D+ 
Sbjct: 619  LVPRR--DASLSESSSRVVNTLLTELDGLNDRRGIFVVGATNRPDMIDPAMLRPGRLDKT 676

Query: 940  LYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELACLSEGC---TGADISLICREAAIS 994
            L++  PN  ++ +I R  +R    P + DV+I  +    E C   +GADI+ + RE+++ 
Sbjct: 677  LFIELPNFEEKVDIMRTLIRSNGTPIADDVDINRIVN-DERCKNFSGADIAALVRESSVL 735

Query: 995  AIEENL 1000
            A++ N 
Sbjct: 736  ALKRNF 741


>gi|397487847|ref|XP_003814989.1| PREDICTED: LOW QUALITY PROTEIN: nuclear valosin-containing
            protein-like [Pan paniscus]
          Length = 903

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 240/627 (38%), Positives = 332/627 (52%), Gaps = 101/627 (16%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARL-------------CAHD-SG-----------VNLF 473
            LG+ P +GVLLHGPPG GKT LA               C+ D SG           + + 
Sbjct: 293  LGVVPPRGVLLHGPPGCGKTLLAHAIAGAECSGMITAHCSFDFSGXPPASASQELDLPIL 352

Query: 474  TVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVAT 533
             V  PE+VS   GESEQ L E+F+ A  +AP ++FIDE+DAI P R+   +++ +R+VA 
Sbjct: 353  KVAAPEIVSGVSGESEQKLRELFEQAVLNAPCIIFIDEIDAITPKREVASKDMERRIVAQ 412

Query: 534  LLNLMD---GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
            LL  MD    V  T  VLVI ATNRPDS++PALRR GR DREI +               
Sbjct: 413  LLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICL--------------G 458

Query: 591  VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYS 648
            +P  A R  IL  L   +    L    ++  +A  T GFVGADL ALC EAA+  + R  
Sbjct: 459  IPDEASRERILQTLCRKLR---LPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR-- 513

Query: 649  KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSS 708
                          L + +                           +P   DLP+  +  
Sbjct: 514  -------------VLMKLQEQQ----------------------KKNPEMEDLPSKGVQE 538

Query: 709  SLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVIL 767
                    SE  D     +        +SE+    L +EL DF  A   V+PSA RE  +
Sbjct: 539  ERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFV 598

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
             VP V W D+G   +++ +L  A+  P ++ + FK +G   P G+L+ GPPGC KTL+A+
Sbjct: 599  TVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAK 658

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+GLNF++VKGPEL + +VGESE+AVR +F +A+ +AP +IFFDE+D L   R   
Sbjct: 659  AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDR 718

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G SV  RV++QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ L+VG P  
Sbjct: 719  ETGASV--RVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 776

Query: 948  TDREEIFRIHLR---KIPCSSDVNIRELAC-LSEGC-TGADISLICREAAISAIEENLDA 1002
             DR  I +   +   K P  +DVN+  +A  L   C TGAD+S + REA+I A+ + +  
Sbjct: 777  ADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMAR 836

Query: 1003 S---------RITMQHLKTAIRHVQPS 1020
                      +++ +H + A + V+ S
Sbjct: 837  QKSGNEKGELKVSHKHFEEAFKKVRSS 863



 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 161/322 (50%), Gaps = 44/322 (13%)

Query: 716  VSEIADNFHNGV--SDSSGGMFMSEKGCALK---LELVDFEKARMKVRPSAMREVILEVP 770
            ++EI D+  + +  SD      +  KG   K   L+ VD E   +  + +  R +  ++ 
Sbjct: 201  ITEIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQIS 260

Query: 771  KVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
             VK+EDVGG     +EV   L+       +H E +  +G  PP G+L+ GPPGC KTL+A
Sbjct: 261  NVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLA 315

Query: 827  RAVA-------------------------SEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             A+A                          E  L  L V  PE+ S   GESE+ +R LF
Sbjct: 316  HAIAGAECSGMITAHCSFDFSGXPPASASQELDLPILKVAAPEIVSGVSGESEQKLRELF 375

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIA 918
             +A  NAP IIF DEID +   R  E     +  R+++QLL  +D L+       V VI 
Sbjct: 376  EQAVLNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIG 433

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEG 978
            ATNRPD +DPAL R GRFDR + +G P+E  RE I +   RK+      +   LA L+ G
Sbjct: 434  ATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPG 493

Query: 979  CTGADISLICREAAISAIEENL 1000
              GAD+  +CREAA+ A+   L
Sbjct: 494  FVGADLMALCREAAMCAVNRVL 515



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/325 (35%), Positives = 166/325 (51%), Gaps = 27/325 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 590 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 647

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 648 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 707

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 708 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 767

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 768 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 813

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS 687
            GADL+AL  EA++  LR+    Q S    +  G L     H +   +    S  I++  
Sbjct: 814 TGADLSALVREASICALRQEMARQKSG---NEKGELKVSHKHFEEAFKKVRSS--ISKRI 868

Query: 688 RDCLDSA-SPCTSDLPTSLLSSSLP 711
           + C++   SP   D+ +S L  + P
Sbjct: 869 KSCMNVCRSPSAGDISSSQLRGASP 893


>gi|365986426|ref|XP_003670045.1| hypothetical protein NDAI_0D04890 [Naumovozyma dairenensis CBS 421]
 gi|343768814|emb|CCD24802.1| hypothetical protein NDAI_0D04890 [Naumovozyma dairenensis CBS 421]
          Length = 870

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 253/720 (35%), Positives = 385/720 (53%), Gaps = 99/720 (13%)

Query: 372  TKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSS 431
            TK     P + +SK  R+   PN      N+++        LGG+    A L ++I    
Sbjct: 195  TKKRSKDPTSKISK--RQKVKPNRTPPTSNLES--------LGGMDDVIAQLMELIGLPI 244

Query: 432  VKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQ 490
            +   +  S G+ P +GVLLHGPPG GKTS+A   A +  V   +++ P VVS   GESE+
Sbjct: 245  LHPEIYLSTGVEPPRGVLLHGPPGCGKTSIANALAGELKVPFISISAPSVVSGMSGESEK 304

Query: 491  ALHEVFDSASQSAPAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG 546
             + E+F+ A   AP ++F DE+DAI P R DGG   E+ +R+VA LL  MD +   +T+G
Sbjct: 305  KIRELFEEAKALAPCLMFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELTMEQTNG 363

Query: 547  --VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL 604
              V+VI ATNRPDS++ ALRR GR DREI ++              VP+   RL IL  +
Sbjct: 364  KPVIVIGATNRPDSLDAALRRAGRFDREICLN--------------VPNEVSRLHILKKM 409

Query: 605  LSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR----YSKIQTSSDVLH 658
               ++   +D  +++L +A  T GFVGADL +L   A    ++R    YS +  ++ ++ 
Sbjct: 410  SQNLK---IDGSIDFLKLAKLTPGFVGADLKSLTTAAGTCAIKRIFETYSTL--TAPIVS 464

Query: 659  STGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLP-TSLLSSSLPLRGTVS 717
            +  T+ + +        D+D   +I + + D   +     SDL  T+ +   LPL   + 
Sbjct: 465  NNNTIEDVDA-------DADDKMDIDQVTEDSHSTEEEDPSDLKNTANIIDPLPL-SIIQ 516

Query: 718  EIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDV 777
            +   NF + ++    G        A+K E  DF KA   ++P+A RE    VP V W +V
Sbjct: 517  KFIKNFPDPLNTEQLGQL------AIKYE--DFLKALPTIQPTAKREGFATVPDVTWANV 568

Query: 778  GGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNF 837
            G   +++ +L  A+  P K  E ++++G   P G+L++GPPGC KTL+A+AVA+E+  NF
Sbjct: 569  GALGKIRIELNMAIVQPIKRPELYEKVGISAPAGVLLWGPPGCGKTLLAKAVANESRANF 628

Query: 838  LAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRV 897
            +++KGPEL +K+VGESE+A+R +F +ARA+ P +IFFDE+D L   R  ++     S RV
Sbjct: 629  ISIKGPELLNKYVGESERAIRQVFTRARASVPCVIFFDELDALVPRR--DTSLSESSSRV 686

Query: 898  MSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIH 957
            ++ LL ELDGL+ R  + V+ ATNRPD IDPA+LRPGR D+ L++  PN  ++ +I    
Sbjct: 687  VNTLLTELDGLNDRRGIFVVGATNRPDMIDPAMLRPGRLDKTLFIELPNYDEKLDIITTL 746

Query: 958  LRK--IPCSSDVNIRELACLSEGC---TGADISLICREAAISAI--------------EE 998
             R    P + DV   E+    E C   +GAD++ + RE+++ A+              E 
Sbjct: 747  ARSNGTPLADDVQFSEI-IKDERCRNFSGADLAALVRESSVLALKRSFFKNDEIQSVGEN 805

Query: 999  NLDAS--------------RITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADE 1044
            NLD                R+TM     A+  ++PS     +   AK+ RL       DE
Sbjct: 806  NLDKEFEDLSVGMNKHDQIRVTMNDFHKALVKIKPSVSDKDR---AKYDRLNKKMGWNDE 862


>gi|145355574|ref|XP_001422034.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582273|gb|ABP00328.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 691

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 243/637 (38%), Positives = 350/637 (54%), Gaps = 96/637 (15%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLSS-LGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGG+      +K++I+   +   L + LG+ P +GVLLHGPPG GKT+LA   A ++
Sbjct: 61   LSDLGGIEDSLKDIKELILCPLMHPELYAWLGVDPPRGVLLHGPPGCGKTTLAHAIAQEA 120

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
             V  F++   E+VS   GESE  + E+F SA+  AP+++FIDE+DAI P R+    E+ +
Sbjct: 121  KVPFFSIAATEIVSGMSGESEAKIRELFQSAAAHAPSLIFIDEIDAIVPKRESAQREMER 180

Query: 529  RMVATLLNLMDGVCRT-DG-------------VLVIAATNRPDSIEPALRRPGRLDREIE 574
            R+VA LL  MD +  T DG             V VI ATNRPD ++ ALRR GR DREI 
Sbjct: 181  RIVAQLLASMDDLQSTIDGTDEVDRLARCRRHVTVIGATNRPDGMDAALRRAGRFDREIM 240

Query: 575  IDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAA 634
            +               +P  A R  IL    + +  +  D ++  ++  T G+VGADL+A
Sbjct: 241  L--------------GIPDEAARERILRVQATKLRLNG-DLDLREIAKKTPGYVGADLSA 285

Query: 635  LCNEAALVCLRR-YSKIQ----TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 689
            L  EAA   + R + K++     S+DV    G      G  DT L               
Sbjct: 286  LAKEAAASAVTRIFKKLEDEERASADVTMDEGVAPALGG--DTRLA-------------- 329

Query: 690  CLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVD 749
                         T  L+   PL  T  E+ D                     L + + D
Sbjct: 330  -------------TGRLADPRPL--TEDELED---------------------LAITMED 353

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F  A  +V+PSA RE     P V W+DVG   E++ +L  ++  P  H E F+ +G    
Sbjct: 354  FSLALTRVQPSAQREGFTTTPNVTWDDVGSLTEIREELKFSIAEPIAHPERFQAMGLNIS 413

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
            TG+L++GPPGC KTL+A+A A+EA  NF+++KGPEL +K+VGESE+AVR+LF +AR+ +P
Sbjct: 414  TGVLLYGPPGCGKTLVAKATANEAMANFISIKGPELLNKYVGESERAVRTLFQRARSASP 473

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
             ++FFDE+D LA  RG   D  S ++RV++QLL E+DGL  R    +IAATNRPD IDPA
Sbjct: 474  CVLFFDEMDSLAPRRGSGGDNTS-AERVVNQLLTEMDGLEARNATFLIAATNRPDMIDPA 532

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELA----CLSEGCTGADIS 985
            +LRPGR D+LLYV  P    R  I +   R+ P + DV + ++A    C  EG +GAD++
Sbjct: 533  MLRPGRLDKLLYVPLPPPDGRVAILKTLTRRTPIAPDVRVDQIALGRSC--EGFSGADLA 590

Query: 986  LICREAAISAIEE-NLDAS-RITMQHLKTAIRHVQPS 1020
             + REA ++A++   L+++  +T +H + A   VQPS
Sbjct: 591  ALVREACVAALKSMTLESTPTVTTKHFEEAFTKVQPS 627



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 129/226 (57%), Gaps = 16/226 (7%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           VK  D+GG  +    + E +  P  H E +  +G  PP G+L+ GPPGC KT +A A+A 
Sbjct: 59  VKLSDLGGIEDSLKDIKELILCPLMHPELYAWLGVDPPRGVLLHGPPGCGKTTLAHAIAQ 118

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EA + F ++   E+ S   GESE  +R LF  A A+APS+IF DEID  A +  +ES   
Sbjct: 119 EAKVPFFSIAATEIVSGMSGESEAKIRELFQSAAAHAPSLIFIDEID--AIVPKRESAQR 176

Query: 892 SVSDRVMSQLLVELDGLHQ--------------RVNVTVIAATNRPDKIDPALLRPGRFD 937
            +  R+++QLL  +D L                R +VTVI ATNRPD +D AL R GRFD
Sbjct: 177 EMERRIVAQLLASMDDLQSTIDGTDEVDRLARCRRHVTVIGATNRPDGMDAALRRAGRFD 236

Query: 938 RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
           R + +G P+E  RE I R+   K+  + D+++RE+A  + G  GAD
Sbjct: 237 REIMLGIPDEAARERILRVQATKLRLNGDLDLREIAKKTPGYVGAD 282



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 145/259 (55%), Gaps = 25/259 (9%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKE--YAILKDIIISSSVKSTLSSLGLRPTKGVLL 449
           P+AQ E F         D+  L  + +E  ++I + I    +      ++GL  + GVLL
Sbjct: 363 PSAQREGFTTTPNVTWDDVGSLTEIREELKFSIAEPI----AHPERFQAMGLNISTGVLL 418

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
           +GPPG GKT +A+  A+++  N  ++ GPE++++  GESE+A+  +F  A  ++P V+F 
Sbjct: 419 YGPPGCGKTLVAKATANEAMANFISIKGPELLNKYVGESERAVRTLFQRARSASPCVLFF 478

Query: 510 DELDAIAPARKDGGEELS-QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
           DE+D++AP R  GG+  S +R+V  LL  MDG+   +   +IAATNRPD I+PA+ RPGR
Sbjct: 479 DEMDSLAPRRGSGGDNTSAERVVNQLLTEMDGLEARNATFLIAATNRPDMIDPAMLRPGR 538

Query: 569 LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM--ATHG 626
           LD+ + + +              P P  R+ IL  L      +  D  V+ +++  +  G
Sbjct: 539 LDKLLYVPL--------------PPPDGRVAILKTLTRRTPIA-PDVRVDQIALGRSCEG 583

Query: 627 FVGADLAALCNEAALVCLR 645
           F GADLAAL  EA +  L+
Sbjct: 584 FSGADLAALVREACVAALK 602


>gi|392576993|gb|EIW70123.1| hypothetical protein TREMEDRAFT_68499 [Tremella mesenterica DSM 1558]
          Length = 737

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 231/599 (38%), Positives = 340/599 (56%), Gaps = 33/599 (5%)

Query: 410  ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGGL  +   L +I+ +        +  G+   +GVLLHG PG GKT L +  A + 
Sbjct: 82   LSMLGGLDTQITQLLEIVALPLQHPEIYAHTGVSRPRGVLLHGVPGGGKTQLVKCLAGEL 141

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            G+   +V+ P +VS   GESE+ L + FD A + AP ++F+DE+DAI P R+    E+ +
Sbjct: 142  GLPFISVSAPSIVSGMSGESEKTLRDTFDEAKKLAPCLLFLDEVDAITPKRETAQREMER 201

Query: 529  RMVATLLNLMDGVCRTD-GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            R+VA LL  MD +  ++  V++I ATNRPDS++ ALRR GR D EIE+            
Sbjct: 202  RIVAQLLTCMDDMASSEEPVVIIGATNRPDSLDTALRRAGRFDHEIEM------------ 249

Query: 588  PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
               VP    R +IL  L + ++ +  D +  +L+ AT G+VGADL +L  EA ++ ++R 
Sbjct: 250  --GVPGVEAREQILKVLCTPLKLTG-DVDFRWLAKATPGYVGADLTSLVTEAGVIAVKRI 306

Query: 648  SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLS 707
             +  +S  +  ST T F     +D      D S  I+    D      P    L    +S
Sbjct: 307  FEDLSSQPL--STSTPFTRPPSTDI----DDQSFAISNGDIDI----DPPIQSLRNVEIS 356

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
            S  PL     ++          +       E    L +   DF +A   V+PSA RE   
Sbjct: 357  SDGPLSSLSLQLRQTPIARFLLTHPYPLPPESLDVLSIHADDFVQALKIVQPSAKREGFA 416

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
             +P V W D+G   EV+ +L  A+  P +  E F  +G   P+G+L++GPPGC KTL+A+
Sbjct: 417  TIPDVSWSDIGALGEVRDELHMAIVQPIRRPELFAVVGIEAPSGVLLWGPPGCGKTLLAK 476

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+  NF++VKGPEL +K+VGESE+AVR +FA+ARA++P +IFFDE+D L   R  E
Sbjct: 477  AVANESRANFISVKGPELLNKYVGESERAVRQVFARARASSPCVIFFDELDALVP-RRDE 535

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            S   S S RV++ LL ELDGL+ R +V VI ATNRPD IDPA++RPGR D+LLYV  P  
Sbjct: 536  SMSES-SARVVNTLLTELDGLNSRKSVYVIGATNRPDMIDPAMVRPGRLDKLLYVDLPTP 594

Query: 948  TDREEIFRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
            ++R EI + H ++ P      S++ +       +G +GAD++ + REAA  A+ + L++
Sbjct: 595  SERVEILKTHTKRTPIPDSAWSEIEVLVTGDQCDGYSGADLAALVREAATLALRKALES 653



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/259 (39%), Positives = 146/259 (56%), Gaps = 22/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  +      DI  LG +  E  +   I+         + +G+    GVLL G
Sbjct: 408 PSAKREGFATIPDVSWSDIGALGEVRDELHMA--IVQPIRRPELFAVVGIEAPSGVLLWG 465

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++S  N  +V GPE++++  GESE+A+ +VF  A  S+P V+F DE
Sbjct: 466 PPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFARARASSPCVIFFDE 525

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           LDA+ P R +   E S R+V TLL  +DG+     V VI ATNRPD I+PA+ RPGRLD+
Sbjct: 526 LDALVPRRDESMSESSARVVNTLLTELDGLNSRKSVYVIGATNRPDMIDPAMVRPGRLDK 585

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEIL--HALLSGMEHSLLDSEVEYLSMATH--GF 627
            + +D+              P+P++R+EIL  H   + +  S   SE+E L       G+
Sbjct: 586 LLYVDL--------------PTPSERVEILKTHTKRTPIPDSAW-SEIEVLVTGDQCDGY 630

Query: 628 VGADLAALCNEAALVCLRR 646
            GADLAAL  EAA + LR+
Sbjct: 631 SGADLAALVREAATLALRK 649



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 136/251 (54%), Gaps = 5/251 (1%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P ++   +GG     TQL+E V  P +H E +   G   P G+L+ G PG  KT + + +
Sbjct: 78   PDLRLSMLGGLDTQITQLLEIVALPLQHPEIYAHTGVSRPRGVLLHGVPGGGKTQLVKCL 137

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E GL F++V  P + S   GESEK +R  F +A+  AP ++F DE+D +   R  E+ 
Sbjct: 138  AGELGLPFISVSAPSIVSGMSGESEKTLRDTFDEAKKLAPCLLFLDEVDAITPKR--ETA 195

Query: 890  GVSVSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
               +  R+++QLL  +D +      V +I ATNRPD +D AL R GRFD  + +G P   
Sbjct: 196  QREMERRIVAQLLTCMDDMASSEEPVVIIGATNRPDSLDTALRRAGRFDHEIEMGVPGVE 255

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQ 1008
             RE+I ++    +  + DV+ R LA  + G  GAD++ +  EA + A++   +   ++ Q
Sbjct: 256  AREQILKVLCTPLKLTGDVDFRWLAKATPGYVGADLTSLVTEAGVIAVKRIFED--LSSQ 313

Query: 1009 HLKTAIRHVQP 1019
             L T+    +P
Sbjct: 314  PLSTSTPFTRP 324


>gi|341865579|ref|NP_001230075.1| nuclear valosin-containing protein-like isoform 3 [Homo sapiens]
 gi|194386940|dbj|BAG59836.1| unnamed protein product [Homo sapiens]
          Length = 667

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 242/630 (38%), Positives = 332/630 (52%), Gaps = 105/630 (16%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARL-------------CAHD-SGVN------------- 471
            LG+ P +GVLLHGPPG GKT LA               C+ D SG N             
Sbjct: 77   LGVVPPRGVLLHGPPGCGKTLLAHAIAGAECSGMITAHCSFDFSGSNDPPASASQELDLP 136

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            +  V  PE+VS   GESEQ L E+F+ A  +AP ++FIDE+DAI P R+   +++ +R+V
Sbjct: 137  ILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIV 196

Query: 532  ATLLNLMD---GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            A LL  MD    V  T  VLVI ATNRPDS++PALRR GR DREI +             
Sbjct: 197  AQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICL------------- 243

Query: 589  AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
              +P  A R  IL  L   +    L    ++  +A  T GFVGADL ALC EAA+  + R
Sbjct: 244  -GIPDEASRERILQTLCRKLR---LPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 299

Query: 647  -YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
               K+Q                                           +P   DLP+  
Sbjct: 300  VLMKLQEQQ--------------------------------------KKNPEMEDLPSKG 321

Query: 706  LSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC-ALKLELVDFEKARMKVRPSAMRE 764
            +          SE  D     +        +SE+    L +EL DF  A   V+PSA RE
Sbjct: 322  VQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKRE 381

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
              + VP V W D+G   +++ +L  A+  P ++ + FK +G   P G+L+ GPPGC KTL
Sbjct: 382  GFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTL 441

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+AVA+E+GLNF++VKGPEL + +VGESE+AVR +F +A+ +AP +IFFDE+D L   R
Sbjct: 442  LAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR 501

Query: 885  GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
                 G SV  RV++QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ L+VG 
Sbjct: 502  SDRETGASV--RVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGL 559

Query: 945  PNETDREEIFRIHLR---KIPCSSDVNIRELAC-LSEGC-TGADISLICREAAISAIEEN 999
            P   DR  I +   +   K P  +DVN+  +A  L   C TGAD+S + REA+I A+ + 
Sbjct: 560  PPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQE 619

Query: 1000 LDAS---------RITMQHLKTAIRHVQPS 1020
            +            +++ +H + A + V+ S
Sbjct: 620  MARQKSGNEKGELKVSHKHFEEAFKKVRSS 649



 Score =  167 bits (424), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 148/290 (51%), Gaps = 41/290 (14%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 800
            L+ VD E   +  + +  R +  ++  VK+EDVGG     +EV   L+       +H E 
Sbjct: 19   LQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-----MRHPEV 73

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVA---------------------------SEA 833
            +  +G  PP G+L+ GPPGC KTL+A A+A                            E 
Sbjct: 74   YHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGAECSGMITAHCSFDFSGSNDPPASASQEL 133

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
             L  L V  PE+ S   GESE+ +R LF +A +NAP IIF DEID +   R  E     +
Sbjct: 134  DLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR--EVASKDM 191

Query: 894  SDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              R+++QLL  +D L+       V VI ATNRPD +DPAL R GRFDR + +G P+E  R
Sbjct: 192  ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASR 251

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            E I +   RK+      +   LA L+ G  GAD+  +CREAA+ A+   L
Sbjct: 252  ERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVL 301



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 144/268 (53%), Gaps = 21/268 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 376 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 433

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 434 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 493

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 494 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 553

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA RL IL  +        LD++V   ++A       +
Sbjct: 554 TLFV--------------GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCY 599

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSD 655
            GADL+AL  EA++  LR+    Q S +
Sbjct: 600 TGADLSALVREASICALRQEMARQKSGN 627


>gi|198464466|ref|XP_001353233.2| GA21172 [Drosophila pseudoobscura pseudoobscura]
 gi|198149730|gb|EAL30736.2| GA21172 [Drosophila pseudoobscura pseudoobscura]
          Length = 933

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 241/686 (35%), Positives = 373/686 (54%), Gaps = 83/686 (12%)

Query: 413  LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
            LGG+      L +++I          LGL P++G+LLHGPPG GKT LAR  +    + L
Sbjct: 254  LGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPL 313

Query: 473  FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVA 532
              V   E++    GESEQ + +VF+ A   +P V+FIDE+DAIA  R+   +++ +R+V+
Sbjct: 314  LEVPATELIGGISGESEQRIRDVFEHAMDFSPCVLFIDEIDAIAGNRQWAAKDMERRIVS 373

Query: 533  TLLNLMDGVCRTD---GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
             L++ MD +  T+    V+VIAAT RPD I+P LRR GRLD EI +              
Sbjct: 374  QLISSMDNLKATEFGQSVIVIAATTRPDVIDPGLRRIGRLDHEIAL-------------- 419

Query: 590  AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAAL-CNEAALVCLRR 646
             +PS  +R EIL      +    +D ++ Y  +A  T G+VG DL AL C  AA+   RR
Sbjct: 420  HIPSRKERREILRIQCESLS---VDPKLNYDKIAELTPGYVGGDLMALVCRSAAVAVKRR 476

Query: 647  ----YSKIQTSSDVLHSTGTLFEFEGHSDTML----------QDSDCSRNITESS----- 687
                + ++  +S+   +T  L + E + +T+L            +D ++++ E+S     
Sbjct: 477  SMKKFRELHVASEKNMATVELDDDETNDETVLGGKAEAKTEGAKADGAKDVEETSGDKSD 536

Query: 688  RDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCA----- 742
            +D  D  +   SD   +   +     G       N    V ++       EK  +     
Sbjct: 537  KDKSDGENLYKSDSDNAEKGAEGATNGKTPGKPSNAAMDVDENEEKPLTDEKKASDNDYY 596

Query: 743  ----------------------LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ 780
                                    + L DF  A    +PSA RE  + VP   WED+G  
Sbjct: 597  EPTLAELTNFLDNPPEEFYDPNFCVTLADFMAAIKVTQPSAKREGFITVPDTTWEDIGAL 656

Query: 781  REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAV 840
            ++++ +L  AV  P K+ E  +R+G   P+G+L+ GPPGC KTL+A+A+A+EAG+NF++V
Sbjct: 657  QDIRDELKLAVLAPVKYPEKLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISV 716

Query: 841  KGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQ 900
            KGPEL + +VGESE+AVRS F +AR +AP +IFFDE D L   R +  DG +   R+++Q
Sbjct: 717  KGPELMNMYVGESERAVRSCFQRARNSAPCVIFFDEFDSLCPKRSEGGDGNNSGTRIVNQ 776

Query: 901  LLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR- 959
            LL E+DG+ +R  V ++AATNRPD IDPA+LRPGR D +LYVG P + +R EI +   + 
Sbjct: 777  LLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGLPEQNERAEILKASTKN 836

Query: 960  --KIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-------EENLDASRITMQHL 1010
              +   + DV++ +LA  +EG TGAD++ + ++A++ A+       ++NLD   +  QH 
Sbjct: 837  GTRPVMADDVDLDDLAAQTEGYTGADLAGLVKQASMYALRQALAEDDDNLDGLCVRRQHF 896

Query: 1011 KTAIRHVQPS----EIHSYKELSAKF 1032
            K A++ ++PS    +   Y++L  K+
Sbjct: 897  KDALQQLRPSVSEQDRKVYEKLRQKY 922



 Score =  157 bits (398), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 142/261 (54%), Gaps = 21/261 (8%)

Query: 391 TLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLL 449
           T P+A+ E F  V  T  +DI  L  +  E  +   ++        L  LGL    GVLL
Sbjct: 633 TQPSAKREGFITVPDTTWEDIGALQDIRDELKLA--VLAPVKYPEKLERLGLTAPSGVLL 690

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
            GPPG GKT LA+  A+++G+N  +V GPE+++   GESE+A+   F  A  SAP V+F 
Sbjct: 691 CGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRSCFQRARNSAPCVIFF 750

Query: 510 DELDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPG 567
           DE D++ P R +GG+      R+V  LL  MDGV    GV ++AATNRPD I+PA+ RPG
Sbjct: 751 DEFDSLCPKRSEGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPG 810

Query: 568 RLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--TH 625
           RLD       + L+         +P   +R EIL A        ++  +V+   +A  T 
Sbjct: 811 RLD-------TILY-------VGLPEQNERAEILKASTKNGTRPVMADDVDLDDLAAQTE 856

Query: 626 GFVGADLAALCNEAALVCLRR 646
           G+ GADLA L  +A++  LR+
Sbjct: 857 GYTGADLAGLVKQASMYALRQ 877



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 7/235 (2%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            + D+GG      +L E +    K  E + ++G  P  G+L+ GPPGC KT +ARA++ + 
Sbjct: 251  FRDLGGMDSTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQL 309

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
             +  L V   EL     GESE+ +R +F  A   +P ++F DEID +A  R  +     +
Sbjct: 310  KMPLLEVPATELIGGISGESEQRIRDVFEHAMDFSPCVLFIDEIDAIAGNR--QWAAKDM 367

Query: 894  SDRVMSQLLVELDGLHQR---VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              R++SQL+  +D L       +V VIAAT RPD IDP L R GR D  + +  P+  +R
Sbjct: 368  ERRIVSQLISSMDNLKATEFGQSVIVIAATTRPDVIDPGLRRIGRLDHEIALHIPSRKER 427

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI-SLICREAAISAIEENLDASR 1004
             EI RI    +     +N  ++A L+ G  G D+ +L+CR AA++    ++   R
Sbjct: 428  REILRIQCESLSVDPKLNYDKIAELTPGYVGGDLMALVCRSAAVAVKRRSMKKFR 482


>gi|302308716|ref|NP_985735.2| AFR188Wp [Ashbya gossypii ATCC 10895]
 gi|299790761|gb|AAS53559.2| AFR188Wp [Ashbya gossypii ATCC 10895]
          Length = 827

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 235/681 (34%), Positives = 368/681 (54%), Gaps = 100/681 (14%)

Query: 409  DISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
            D+S LGG+    A L +++    +     +S G+ P +G+LLHGPPG GKTS+A   A +
Sbjct: 203  DLSSLGGMDDVIAQLMELVALPILHPEIFASTGVEPPRGILLHGPPGCGKTSIANALAGE 262

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-EL 526
              V   +++ P VVS   GESE+ + ++F+ A   AP +VF DE+DAI P R  G + E+
Sbjct: 263  LQVPFISISAPSVVSGMSGESEKKIRDLFEEAKSLAPCLVFFDEIDAITPKRDGGAQREM 322

Query: 527  SQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
             +R+VA LL  MD +   +T+G  V++I ATNRPDS++ ALRR GR DREI ++      
Sbjct: 323  ERRIVAQLLTSMDELSFEKTNGKPVIIIGATNRPDSLDSALRRAGRFDREISLN------ 376

Query: 583  LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAA 640
                    VP+   R+ IL  + S ++   +D E+++L +A  T GFVGADL AL   A 
Sbjct: 377  --------VPNELSRMHILKKMTSNLK---VDGEIDFLKLAKLTPGFVGADLKALATAAG 425

Query: 641  LVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSD 700
               ++R    Q  + V  S G           M  DSD +++  +++ D ++        
Sbjct: 426  TCAIKRI--FQNYASVAASDGA----------MEIDSDNNQSSLKNTADVIEP------- 466

Query: 701  LPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPS 760
                     LPL  T+     N+   +++        ++   L +   DF KA   ++P+
Sbjct: 467  ---------LPL-STIQVFLKNYTEPLNE--------QQLSTLSITYEDFLKALPTIQPT 508

Query: 761  AMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGC 820
            A RE    VP V W  VG    ++ +L  A+  P K  E ++++G   P G+L++GPPGC
Sbjct: 509  AKREGFATVPDVTWSSVGALSNIRVELNMAIVQPIKRPELYEKVGISAPAGVLLWGPPGC 568

Query: 821  SKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGL 880
             KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F +ARA+ P +IFFDE+D L
Sbjct: 569  GKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFTRARASVPCVIFFDELDAL 628

Query: 881  AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLL 940
               R  ++     S RV++ LL ELDGL+ R  + VI ATNRPD IDPA+LRPGR D+ L
Sbjct: 629  VPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKTL 686

Query: 941  YVGPPNETDREEIFRIHLRK--IPCSSDVNIRELACLSEGC---TGADISLICREAAI-- 993
            ++  PN  ++ +I    ++    P + DV++  +    E C   +GAD++ + RE+++  
Sbjct: 687  FIELPNADEKLDIMHTLVKSNGTPLAPDVDLSAVVN-DERCRNFSGADLAALLRESSVLA 745

Query: 994  ------------SAIEENLDASR-------------ITMQHLKTAIRHVQPSEIHSYKEL 1028
                        S ++ NLD                +T+   + A+R ++PS     +  
Sbjct: 746  LKRNFFHSGEIQSVLDNNLDREFGDLSAGTPMNEIIVTVTDFENALRKIKPSVSDKDR-- 803

Query: 1029 SAKFQRLVHSNAEADESGYQL 1049
              K+ +L       DE+G Q+
Sbjct: 804  -MKYNKLNKKMGWNDEAGVQV 823



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/234 (39%), Positives = 130/234 (55%), Gaps = 9/234 (3%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P      +GG  +V  QLME V  P  H E F   G  PP GIL+ GPPGC KT +A A+
Sbjct: 200 PSADLSSLGGMDDVIAQLMELVALPILHPEIFASTGVEPPRGILLHGPPGCGKTSIANAL 259

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  + F+++  P + S   GESEK +R LF +A++ AP ++FFDEID   AI  K   
Sbjct: 260 AGELQVPFISISAPSVVSGMSGESEKKIRDLFEEAKSLAPCLVFFDEID---AITPKRDG 316

Query: 890 GVS--VSDRVMSQLLVELDGL-HQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           G    +  R+++QLL  +D L  ++ N   V +I ATNRPD +D AL R GRFDR + + 
Sbjct: 317 GAQREMERRIVAQLLTSMDELSFEKTNGKPVIIIGATNRPDSLDSALRRAGRFDREISLN 376

Query: 944 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            PNE  R  I +     +    +++  +LA L+ G  GAD+  +   A   AI+
Sbjct: 377 VPNELSRMHILKKMTSNLKVDGEIDFLKLAKLTPGFVGADLKALATAAGTCAIK 430


>gi|164659980|ref|XP_001731114.1| hypothetical protein MGL_2113 [Malassezia globosa CBS 7966]
 gi|159105012|gb|EDP43900.1| hypothetical protein MGL_2113 [Malassezia globosa CBS 7966]
          Length = 737

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 233/624 (37%), Positives = 341/624 (54%), Gaps = 81/624 (12%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G+ P +GVL HGPPG GKT +A   A + GV   +V+ P +VS   GESE+AL + FD A
Sbjct: 124  GVTPPRGVLFHGPPGCGKTMMAGALAGELGVPFLSVSAPSIVSGTSGESEKALRDTFDEA 183

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
               AP ++F+DE+DAI P R+    E+ +R+VA LL  +D +   R +G  V+V+ ATNR
Sbjct: 184  KSIAPCILFVDEIDAITPKRETAQREMERRIVAQLLTCLDELAWEREEGQPVMVLGATNR 243

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PD+I+PALRR GR D EI +               VP    R +IL  L + +  +  D 
Sbjct: 244  PDAIDPALRRAGRFDHEISL--------------GVPDEHGREQILQVLCAKLRLAG-DF 288

Query: 616  EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML- 674
             V+YL+  T G+VGADL +L   A ++ ++R  +       LH T    + +  +     
Sbjct: 289  NVKYLAKRTPGYVGADLTSLTAAAGIIAVKRIFQY------LHDTQESMQCDDEAPIEYK 342

Query: 675  ------------QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADN 722
                        Q+S+  R + +     + +       LP S+ SSS+ +          
Sbjct: 343  QVATKTQVSNEDQESEVERKLIKEEEGRILAGPGFLEGLPDSVQSSSIAM------FLKR 396

Query: 723  FHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQRE 782
            F N +S+        E+   L +   DF +A   V+PS+ RE    VP V W+D+G   +
Sbjct: 397  FVNPLSN--------EQLEHLAITNDDFLEALKVVQPSSKREGFATVPDVTWDDIGALHQ 448

Query: 783  VKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKG 842
            ++ +L  AV  P +  E F+ +G     G+L++GPPGC KTL+A+AVA+E+  NF++VKG
Sbjct: 449  IREELSMAVVQPIRRPELFRSLGISASCGVLLWGPPGCGKTLLAKAVANESRANFISVKG 508

Query: 843  PELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQL 901
            PEL +K+VGESEKAVR +FA+ARA++P +IFFDE+D L   R    D +S  S RV++ L
Sbjct: 509  PELLNKYVGESEKAVRQVFARARASSPCVIFFDELDALVPRR---DDTLSEASARVVNTL 565

Query: 902  LVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKI 961
            L ELDGL  RV   VIAATNRPD IDPA+ RPGR DRLLYV  P+  +R +I +   +  
Sbjct: 566  LTELDGLESRVQTYVIAATNRPDMIDPAMCRPGRLDRLLYVDLPSPDERLDILQALTKMS 625

Query: 962  PCSSDVNIRELA------------CLSEGCTGADISLICREAAISAIEENL-------DA 1002
            P ++  + ++L               ++G +GAD++ + REAA++A+ E +       D 
Sbjct: 626  PLATSTDPQDLEHQPVRLELIAHDHRADGYSGADLASLVREAAVTALREKIVSPLQYTDD 685

Query: 1003 SR------ITMQHLKTAIRHVQPS 1020
            S       +   H   A   VQPS
Sbjct: 686  SEPVERVLVYQNHFVHAFDRVQPS 709



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/232 (40%), Positives = 134/232 (57%), Gaps = 6/232 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG      + +E V  P  H E +   G  PP G+L  GPPGC KT+MA A+
Sbjct: 89  PPTRLRDIGGMAAAIEKALELVAMPLCHPEIYLHTGVTPPRGVLFHGPPGCGKTMMAGAL 148

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ FL+V  P + S   GESEKA+R  F +A++ AP I+F DEID +   R  E+ 
Sbjct: 149 AGELGVPFLSVSAPSIVSGTSGESEKALRDTFDEAKSIAPCILFVDEIDAITPKR--ETA 206

Query: 890 GVSVSDRVMSQLLVELDGL----HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++QLL  LD L     +   V V+ ATNRPD IDPAL R GRFD  + +G P
Sbjct: 207 QREMERRIVAQLLTCLDELAWEREEGQPVMVLGATNRPDAIDPALRRAGRFDHEISLGVP 266

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           +E  RE+I ++   K+  + D N++ LA  + G  GAD++ +   A I A++
Sbjct: 267 DEHGREQILQVLCAKLRLAGDFNVKYLAKRTPGYVGADLTSLTAAAGIIAVK 318



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/270 (39%), Positives = 150/270 (55%), Gaps = 29/270 (10%)

Query: 399 FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           F  V      DI  L  + +E ++   ++          SLG+  + GVLL GPPG GKT
Sbjct: 432 FATVPDVTWDDIGALHQIREELSMA--VVQPIRRPELFRSLGISASCGVLLWGPPGCGKT 489

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            LA+  A++S  N  +V GPE++++  GESE+A+ +VF  A  S+P V+F DELDA+ P 
Sbjct: 490 LLAKAVANESRANFISVKGPELLNKYVGESEKAVRQVFARARASSPCVIFFDELDALVPR 549

Query: 519 RKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
           R D   E S R+V TLL  +DG+       VIAATNRPD I+PA+ RPGRLDR + +D+ 
Sbjct: 550 RDDTLSEASARVVNTLLTELDGLESRVQTYVIAATNRPDMIDPAMCRPGRLDRLLYVDL- 608

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHAL--LSGMEHSLLDSEVEY----LSMATH-----GF 627
                        PSP +RL+IL AL  +S +  S    ++E+    L +  H     G+
Sbjct: 609 -------------PSPDERLDILQALTKMSPLATSTDPQDLEHQPVRLELIAHDHRADGY 655

Query: 628 VGADLAALCNEAALVCLRR--YSKIQTSSD 655
            GADLA+L  EAA+  LR    S +Q + D
Sbjct: 656 SGADLASLVREAAVTALREKIVSPLQYTDD 685


>gi|374108966|gb|AEY97872.1| FAFR188Wp [Ashbya gossypii FDAG1]
          Length = 827

 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 235/681 (34%), Positives = 368/681 (54%), Gaps = 100/681 (14%)

Query: 409  DISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
            D+S LGG+    A L +++    +     +S G+ P +G+LLHGPPG GKTS+A   A +
Sbjct: 203  DLSSLGGMDDVIAQLMELVALPILHPEIFASTGVEPPRGILLHGPPGCGKTSIANALAGE 262

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-EL 526
              V   +++ P VVS   GESE+ + ++F+ A   AP +VF DE+DAI P R  G + E+
Sbjct: 263  LQVPFISISAPSVVSGMSGESEKKIRDLFEEAKSLAPCLVFFDEIDAITPKRDGGAQREM 322

Query: 527  SQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
             +R+VA LL  MD +   +T+G  V++I ATNRPDS++ ALRR GR DREI ++      
Sbjct: 323  ERRIVAQLLTSMDELSFEKTNGKPVIIIGATNRPDSLDSALRRAGRFDREISLN------ 376

Query: 583  LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAA 640
                    VP+   R+ IL  + S ++   +D E+++L +A  T GFVGADL AL   A 
Sbjct: 377  --------VPNELSRMHILKKMTSNLK---VDGEIDFLKLAKLTPGFVGADLKALATAAG 425

Query: 641  LVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSD 700
               ++R    Q  + V  S G           M  DSD +++  +++ D ++        
Sbjct: 426  TCAIKRI--FQNYASVAASDGA----------MEIDSDNNQSSLKNTADVIEP------- 466

Query: 701  LPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPS 760
                     LPL  T+     N+   +++        ++   L +   DF KA   ++P+
Sbjct: 467  ---------LPL-STIQVFLKNYTEPLNE--------QQLSTLSITYEDFLKALPTIQPT 508

Query: 761  AMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGC 820
            A RE    VP V W  VG    ++ +L  A+  P K  E ++++G   P G+L++GPPGC
Sbjct: 509  AKREGFATVPDVTWSSVGALSNIRVELNMAIVQPIKRPELYEKVGISAPAGVLLWGPPGC 568

Query: 821  SKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGL 880
             KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F +ARA+ P +IFFDE+D L
Sbjct: 569  GKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFTRARASVPCVIFFDELDAL 628

Query: 881  AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLL 940
               R  ++     S RV++ LL ELDGL+ R  + VI ATNRPD IDPA+LRPGR D+ L
Sbjct: 629  VPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKTL 686

Query: 941  YVGPPNETDREEIFRIHLRK--IPCSSDVNIRELACLSEGC---TGADISLICREAAI-- 993
            ++  PN  ++ +I    ++    P + DV++  +    E C   +GAD++ + RE+++  
Sbjct: 687  FIELPNADEKLDIMHTLVKSNGTPLARDVDLSAVVN-DERCRNFSGADLAALLRESSVLA 745

Query: 994  ------------SAIEENLDASR-------------ITMQHLKTAIRHVQPSEIHSYKEL 1028
                        S ++ NLD                +T+   + A+R ++PS     +  
Sbjct: 746  LKRNFFHSGEIQSVLDNNLDREFGDLSAGTPMNEIIVTVTDFENALRKIKPSVSDKDR-- 803

Query: 1029 SAKFQRLVHSNAEADESGYQL 1049
              K+ +L       DE+G Q+
Sbjct: 804  -MKYNKLNKKMGWNDEAGVQV 823



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/234 (39%), Positives = 130/234 (55%), Gaps = 9/234 (3%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P      +GG  +V  QLME V  P  H E F   G  PP GIL+ GPPGC KT +A A+
Sbjct: 200 PSADLSSLGGMDDVIAQLMELVALPILHPEIFASTGVEPPRGILLHGPPGCGKTSIANAL 259

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  + F+++  P + S   GESEK +R LF +A++ AP ++FFDEID   AI  K   
Sbjct: 260 AGELQVPFISISAPSVVSGMSGESEKKIRDLFEEAKSLAPCLVFFDEID---AITPKRDG 316

Query: 890 GVS--VSDRVMSQLLVELDGL-HQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           G    +  R+++QLL  +D L  ++ N   V +I ATNRPD +D AL R GRFDR + + 
Sbjct: 317 GAQREMERRIVAQLLTSMDELSFEKTNGKPVIIIGATNRPDSLDSALRRAGRFDREISLN 376

Query: 944 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            PNE  R  I +     +    +++  +LA L+ G  GAD+  +   A   AI+
Sbjct: 377 VPNELSRMHILKKMTSNLKVDGEIDFLKLAKLTPGFVGADLKALATAAGTCAIK 430


>gi|326915142|ref|XP_003203879.1| PREDICTED: nuclear valosin-containing protein-like [Meleagris
            gallopavo]
          Length = 874

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 232/602 (38%), Positives = 330/602 (54%), Gaps = 82/602 (13%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +G LLHGPPG GKT LA+  A +  + +  V   E+VS   GESEQ L E+FD 
Sbjct: 317  LGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQ 376

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP V+FIDE+DAI P R+   +++ +R+VA LL  +D    V  T  VLVI ATNR
Sbjct: 377  AVLNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNR 436

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R +IL  L   ++   L  
Sbjct: 437  PDSLDPALRRAGRFDREICL--------------GIPDEAAREKILQTLCRKLK---LPE 479

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
              ++L +A  T G+VGAD         L+ L R + + T + VL                
Sbjct: 480  SFDFLQLAHLTPGYVGAD---------LMALCREAAMCTVNRVL---------------- 514

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
            ++     R   ++  +  +      +++P  L      L+       D            
Sbjct: 515  IKSEKQQRKCVQAGGNTAEEGVGIETEIPEELQRLLDLLKRPDPLPEDQLQK-------- 566

Query: 734  MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
                     L +E+ DF  A   V+PSA RE  + +P V W D+G   +V+ +L  A+  
Sbjct: 567  ---------LCIEMNDFIVALPSVQPSAKREGFVTIPDVTWADIGALEDVREELTMAILA 617

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P ++ E FK +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGES
Sbjct: 618  PVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 677

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            E+AVR +F +AR +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  
Sbjct: 678  ERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGASV--RVVNQLLTEMDGLENRQQ 735

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIR 970
            V ++AATNRPD IDPA+LRPGR D+ LYVG P   DR  I +   +   + P  +DVN+ 
Sbjct: 736  VFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDTDVNLE 795

Query: 971  ELACLSEGC---TGADISLICREAAISAIEENL---------DASRITMQHLKTAIRHVQ 1018
            E+A  S+ C   TGAD+S + REA++ A+ + +            +I+ +H + A R V+
Sbjct: 796  EIA-YSQQCDCYTGADLSALVREASVCALRQEMALPNTESKKGEIKISHKHFEEAFRKVK 854

Query: 1019 PS 1020
             S
Sbjct: 855  SS 856



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/270 (38%), Positives = 148/270 (54%), Gaps = 6/270 (2%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P VK+EDVGG  E   ++ + +    +H E +  +G  PP G L+ GPPGC KTL+A+A+
Sbjct: 284  PSVKFEDVGGNDETLKEICKML-IHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAI 342

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E  L  L V   E+ S   GESE+ +R LF +A  NAP ++F DEID +   R  E  
Sbjct: 343  AGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKR--EVA 400

Query: 890  GVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               +  R+++QLL  LD L+       V VI ATNRPD +DPAL R GRFDR + +G P+
Sbjct: 401  SKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 460

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRIT 1006
            E  RE+I +   RK+      +  +LA L+ G  GAD+  +CREAA+  +   L  S   
Sbjct: 461  EAAREKILQTLCRKLKLPESFDFLQLAHLTPGYVGADLMALCREAAMCTVNRVLIKSEKQ 520

Query: 1007 MQHLKTAIRHVQPSEIHSYKELSAKFQRLV 1036
             +    A  +     +    E+  + QRL+
Sbjct: 521  QRKCVQAGGNTAEEGVGIETEIPEELQRLL 550



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 139/259 (53%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  +      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 583 PSAKREGFVTIPDVTWADIGALEDVREELTMA--ILAPVRNPEQFKALGLTTPAGVLLAG 640

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 641 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDE 700

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 701 VDALCPRRSDRESGASVRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDK 760

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P P  RL IL  +        LD++V    +A       +
Sbjct: 761 TLYV--------------GLPPPEDRLAILKTITKDGTRPPLDTDVNLEEIAYSQQCDCY 806

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL+AL  EA++  LR+
Sbjct: 807 TGADLSALVREASVCALRQ 825


>gi|301774052|ref|XP_002922441.1| PREDICTED: nuclear valosin-containing protein-like [Ailuropoda
            melanoleuca]
          Length = 849

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 232/572 (40%), Positives = 318/572 (55%), Gaps = 65/572 (11%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG  P +GVLLHGPPG GKT LA   A +  + +  V   E+VS   GESEQ L E+F+ 
Sbjct: 286  LGATPPRGVLLHGPPGCGKTLLANAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQ 345

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV---CRTDGVLVIAATNR 555
            A  +AP V+FIDE+DAI P R+   +++ +R+VA LL  MD +     T  VLVI ATNR
Sbjct: 346  AVSNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNTMAETAQVLVIGATNR 405

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PD+++PALRR GR DREI +               +P  A R  IL  L   +   L +S
Sbjct: 406  PDALDPALRRAGRFDREICL--------------GIPDEASRERILRTLCRKLR--LPES 449

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDTM 673
                +L+  T GFVGADL ALC EAA+  + R    +Q    V   T  L    G  D  
Sbjct: 450  FSFRHLAHLTPGFVGADLMALCREAAMGAVSRVLMTLQEQLPVDPETAGLPSVRGRED-- 507

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
                   R   E + +     +P        LL S  PL                     
Sbjct: 508  -------RTGAEPTPE-----TPDELQRLLELLRSQDPLS-------------------- 535

Query: 734  MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
                E+   L +E  DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+  
Sbjct: 536  ---EEQLQGLCIEWDDFTAALASVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILA 592

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P ++ + F+ +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGES
Sbjct: 593  PVRNPDQFRALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 652

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            E+AVR +F +AR++AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  
Sbjct: 653  ERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEARQQ 710

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIR 970
            V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   + P  +DVN+ 
Sbjct: 711  VFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLGADVNLE 770

Query: 971  ELAC--LSEGCTGADISLICREAAISAIEENL 1000
             LA     +  +GAD+S + REA++ A+ + +
Sbjct: 771  ALATDLRCDRYSGADLSALVREASVCALRQEM 802



 Score =  186 bits (473), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/270 (40%), Positives = 154/270 (57%), Gaps = 16/270 (5%)

Query: 736 MSEKGCALKLEL--VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLME 789
           +  KG   K +L   D E   + +R +  + + L V KVK+EDVGG     +EV   L+ 
Sbjct: 217 LKSKGSKRKKDLQEADGEIEAVLLRKAKAKGLDLRVSKVKFEDVGGNDTTLKEVCKMLIH 276

Query: 790 AVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKW 849
                 +H E ++ +G  PP G+L+ GPPGC KTL+A A+A E  L  L V   E+ S  
Sbjct: 277 -----MRHPEVYQHLGATPPRGVLLHGPPGCGKTLLANAIAGELDLPILKVAATEIVSGV 331

Query: 850 VGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLH 909
            GESE+ +R LF +A +NAP ++F DEID +   R  E     +  R+++QLL  +D L+
Sbjct: 332 SGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLN 389

Query: 910 ---QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD 966
              +   V VI ATNRPD +DPAL R GRFDR + +G P+E  RE I R   RK+     
Sbjct: 390 TMAETAQVLVIGATNRPDALDPALRRAGRFDREICLGIPDEASRERILRTLCRKLRLPES 449

Query: 967 VNIRELACLSEGCTGADISLICREAAISAI 996
            + R LA L+ G  GAD+  +CREAA+ A+
Sbjct: 450 FSFRHLAHLTPGFVGADLMALCREAAMGAV 479



 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/259 (38%), Positives = 141/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 558 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFRALGLVTPAGVLLAG 615

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 616 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDE 675

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 676 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 735

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGF 627
            + +               +P PA RL IL  +        L ++V   ++AT      +
Sbjct: 736 TLFV--------------GLPPPADRLAILKTITKNGTRPPLGADVNLEALATDLRCDRY 781

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL+AL  EA++  LR+
Sbjct: 782 SGADLSALVREASVCALRQ 800


>gi|393247431|gb|EJD54938.1| AAA-domain-containing protein [Auricularia delicata TFB-10046 SS5]
          Length = 709

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 247/660 (37%), Positives = 352/660 (53%), Gaps = 49/660 (7%)

Query: 395  AQIEFQNVQATVEQDISKLGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPP 453
            A++   N  A     ++ LGG+S     +L+ + +           G+ P +GVLLHGPP
Sbjct: 55   AKVAISNDHAPPSTRLADLGGISACVEQMLRLVALPLCHPEVYLHTGVPPPRGVLLHGPP 114

Query: 454  GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
            G GKT LA   A +  +    V+ P +VS   GESE+ L + FD A + AP ++FIDE+D
Sbjct: 115  GCGKTLLANAIAGELQMPFINVSAPSIVSGMSGESEKTLRDTFDEAKRVAPCLLFIDEID 174

Query: 514  AIAPARKDGGEELSQRMVATLLNLMDGVC----RTDGVLVIAATNRPDSIEPALRRPGRL 569
            A+ P R+    E+ +R+VA  L  MD +         V+VI ATNRPDS++ ALRR GR 
Sbjct: 175  AVTPKRESAQREMERRIVAQFLTCMDDLAWEKNNNKPVIVIGATNRPDSLDAALRRAGRF 234

Query: 570  DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 629
            D EI +               VP    R +IL  L S +  S  D + + L+ AT G+VG
Sbjct: 235  DHEISM--------------GVPDEEAREQILRVLSSKLRLSG-DFDFKQLAKATPGYVG 279

Query: 630  ADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 689
            ADLAAL   A ++ ++R    Q  SD    T TL   +  +++M  D   +         
Sbjct: 280  ADLAALTGAAGVIAVKRI--FQQISD---GTLTLLPDDVVTESMQVDGAPADPPAAPDPA 334

Query: 690  CLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVD 749
              +   P  S     +  +SLP       IA NF      +  G     +   L +   D
Sbjct: 335  PPEPVVPPPSSTSRPIPFASLPHNLEPHSIA-NFLR----AHPGPLTEAQLAPLHITNAD 389

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F  A  +V+PS+ RE    VP V W DVG     + +L  A+  P +  E F  +G    
Sbjct: 390  FTAALREVQPSSQREGFATVPDVTWADVGALHGTRDELHMAIVEPIRRPELFAALGIAGA 449

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L++GPPGC KTL+A+AVA+E+  NF++VKGPEL +K+VGESE+AVR +FA+ARA+AP
Sbjct: 450  CGVLLWGPPGCGKTLLAKAVANESAANFISVKGPELLNKYVGESERAVRQVFARARASAP 509

Query: 870  SIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             +IFFDEID L   R    D +S  S RV++ LL ELDGL  R  V VIAATNRPD +DP
Sbjct: 510  CVIFFDEIDALVPRR---DDALSEASSRVVNTLLAELDGLEARKAVYVIAATNRPDIVDP 566

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP---CSSDVNIREL--ACLSEGCTGAD 983
            A+ RPGR D+LLYV  P+ + R EI    LR++P    ++   + EL      +G +GAD
Sbjct: 567  AMCRPGRLDKLLYVDLPDASARAEIAATLLRRVPLPDAAAHAGVLELVRGARCDGFSGAD 626

Query: 984  ISLICREAAISAIEE-----NLDAS-RITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            ++ + REA + A+ +     N DA+  +T+   + A+  V PS    +   Y+ L  + Q
Sbjct: 627  LAALVREAGVGALRQLVKDPNGDAAMNVTLADFERALPKVSPSVSPAQRRKYEALRTRLQ 686


>gi|428673168|gb|EKX74081.1| cell division cycle protein 48, putative [Babesia equi]
          Length = 803

 Score =  369 bits (947), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 234/625 (37%), Positives = 340/625 (54%), Gaps = 101/625 (16%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG  ++ A ++++I +         +LG++P +GVLL+GPPG+GKT +AR  A+++G  
Sbjct: 214  IGGCRRQMAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTLIARAVANETGAF 273

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPEV+S+  GE+E  L   F  A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 274  FFLINGPEVMSKMAGEAESNLRRAFAEAEKNAPSIIFIDEVDSIAPKREKTNGEVERRVV 333

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+     V+VIAATNR +SI+PALRR GR D+EI+I               V
Sbjct: 334  SQLLTLMDGLKGRGQVVVIAATNRQNSIDPALRRFGRFDKEIDI--------------GV 379

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR-RYSKI 650
            P  A RLEIL      M+ +  + ++E L+  +HGFVGADLA LC E+AL C+R +   I
Sbjct: 380  PDDAGRLEILKIHTRNMKLA-PEVKLEELAANSHGFVGADLAQLCTESALSCIREKMGAI 438

Query: 651  QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSL 710
                D +             DT + DS       E     +++ +P +            
Sbjct: 439  DLEDDTI-------------DTEILDSMAV--TQEHFNAAMNTCNPSS------------ 471

Query: 711  PLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVP 770
             LR TV EI     N   D  GG           LE V           SA+RE+IL   
Sbjct: 472  -LRETVVEIP----NVKWDDIGG-----------LESVK----------SALREMIL--- 502

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
                                  +P +H E F++ G  P  G+L +GPPGC KTL+A+AVA
Sbjct: 503  ----------------------YPIEHPEKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 540

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES-D 889
            SE   NF+++KGPEL + W GESE  VR +F KAR +AP ++FFDE+D +   RG  + D
Sbjct: 541  SECSANFISIKGPELLTMWFGESEANVREVFDKARTSAPCVLFFDELDSIGTARGNNAGD 600

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
                 DRVM+QLL E+DG+  + N+  I ATNRP+ +D ALLRPGR D+L+Y+  P+   
Sbjct: 601  ASGAGDRVMNQLLTEIDGVSAKKNIFFIGATNRPNLLDEALLRPGRLDQLIYIPLPDLPA 660

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQH 1009
            R  I    LRK P +++V I  L   + G +GAD++ +C+ A  +AI + +    +    
Sbjct: 661  RISILNATLRKSPVAANVPISFLGQKTAGFSGADLAEMCKIATRAAIRDAIAFEEMN--- 717

Query: 1010 LKTAIRHVQPSEIHSYKELSAK-FQ 1033
             +TA   V P+      E++ K FQ
Sbjct: 718  -RTADGTVDPNSSEFKYEITRKHFQ 741



 Score =  223 bits (567), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 160/267 (59%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R    Q+ E +E P +H   FK +G +PP G+L++GPPG  KTL+ARAVA+
Sbjct: 209  VGYDDIGGCRRQMAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTLIARAVAN 268

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GE+E  +R  FA+A  NAPSIIF DE+D +A  R K +   
Sbjct: 269  ETGAFFFLINGPEVMSKMAGEAESNLRRAFAEAEKNAPSIIFIDEVDSIAPKREKTNG-- 326

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV+SQLL  +DGL  R  V VIAATNR + IDPAL R GRFD+ + +G P++  R 
Sbjct: 327  EVERRVVSQLLTLMDGLKGRGQVVVIAATNRQNSIDPALRRFGRFDKEIDIGVPDDAGRL 386

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN------------ 999
            EI +IH R +  + +V + ELA  S G  GAD++ +C E+A+S I E             
Sbjct: 387  EILKIHTRNMKLAPEVKLEELAANSHGFVGADLAQLCTESALSCIREKMGAIDLEDDTID 446

Query: 1000 ---LDASRITMQHLKTAIRHVQPSEIH 1023
               LD+  +T +H   A+    PS + 
Sbjct: 447  TEILDSMAVTQEHFNAAMNTCNPSSLR 473



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 135/277 (48%), Gaps = 39/277 (14%)

Query: 380 LNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISS-SVKSTLSS 438
            NA   +    +L    +E  NV+         +GGL    + L+++I+           
Sbjct: 460 FNAAMNTCNPSSLRETVVEIPNVK------WDDIGGLESVKSALREMILYPIEHPEKFEK 513

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G+ P++GVL +GPPG GKT LA+  A +   N  ++ GPE+++  +GESE  + EVFD 
Sbjct: 514 FGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDK 573

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELS---QRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A  SAP V+F DELD+I  AR +   + S    R++  LL  +DGV     +  I ATNR
Sbjct: 574 ARTSAPCVLFFDELDSIGTARGNNAGDASGAGDRVMNQLLTEIDGVSAKKNIFFIGATNR 633

Query: 556 PDSIEPALRRPGRLDREIEIDM-------SFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
           P+ ++ AL RPGRLD+ I I +       S L + L+ SP A   P              
Sbjct: 634 PNLLDEALLRPGRLDQLIYIPLPDLPARISILNATLRKSPVAANVP-------------- 679

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                   + +L   T GF GADLA +C  A    +R
Sbjct: 680 --------ISFLGQKTAGFSGADLAEMCKIATRAAIR 708


>gi|367016495|ref|XP_003682746.1| hypothetical protein TDEL_0G01680 [Torulaspora delbrueckii]
 gi|359750409|emb|CCE93535.1| hypothetical protein TDEL_0G01680 [Torulaspora delbrueckii]
          Length = 806

 Score =  369 bits (947), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 229/608 (37%), Positives = 348/608 (57%), Gaps = 73/608 (12%)

Query: 409  DISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
            ++  LGG+    A L ++I    +   +  S G+ P +GVLLHGPPG GKTS+A   A +
Sbjct: 190  NLESLGGMDDVIAQLMELIGLPILHPEIYLSTGVEPPRGVLLHGPPGCGKTSIANALAGE 249

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG--EE 525
              V   +V+ P +VS   GESE+ L ++FD A Q AP +VF DE+DAI P R DGG   E
Sbjct: 250  LQVPFISVSAPSIVSGMSGESEKKLRDLFDEAKQLAPCLVFFDEIDAITPKR-DGGAQRE 308

Query: 526  LSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
            + +R+VA LL  MD +   +TDG  V++I ATNRPDS++ ALRR GR DREI ++     
Sbjct: 309  MERRIVAQLLTSMDEISMQKTDGKPVIIIGATNRPDSLDSALRRAGRFDREICLN----- 363

Query: 582  SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEA 639
                     VP+   R+ IL  +    +H  +D E++++ +A  T GFVGADL AL   +
Sbjct: 364  ---------VPNEISRIHILKKM---SQHLKIDGEIDFIKLAKLTPGFVGADLKALITAS 411

Query: 640  ALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTS 699
                ++R    Q  +D+   + +  E +    T + D    +N                 
Sbjct: 412  GTCAIKRI--FQEYADLSALSDSQMEVD---QTGILDEKAMKN----------------- 449

Query: 700  DLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRP 759
               T+ +   +PL  T+ +   NF   ++D        E+   L ++  DF KA   ++P
Sbjct: 450  ---TANIIDPIPL-STIQKFIKNFPEPLND--------EQLQHLTIKYEDFLKALPTIQP 497

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            +A RE    VP V W +VG   +++ +L  A+  P K  E ++++G   P G+L++GPPG
Sbjct: 498  TAKREGFATVPDVTWANVGALSKIRIELNMAIVQPIKRPELYEKVGISAPAGVLLWGPPG 557

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
            C KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F +ARA+ P +IFFDE+D 
Sbjct: 558  CGKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFTRARASVPCVIFFDELDA 617

Query: 880  LAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            L   R  ++     S RV++ LL ELDGL+ R  + VI ATNRPD IDPA+LRPGR D+ 
Sbjct: 618  LVPRR--DTTLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKT 675

Query: 940  LYVGPPNETDREEIFRIHLRKI----PCSSDVNIRELACLSEGC---TGADISLICREAA 992
            L++  PN  ++ +I  I   K+    P + DV++ ++    E C   +GADI+ + REA+
Sbjct: 676  LFIELPNTQEKLDI--IKTLKVSNGTPIADDVDLEKVIA-DERCRNFSGADIAALLREAS 732

Query: 993  ISAIEENL 1000
            + A++ + 
Sbjct: 733  VLALKRSF 740



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 159/320 (49%), Gaps = 37/320 (11%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P    E +GG  +V  QLME +  P  H E +   G  PP G+L+ GPPGC KT +A A+
Sbjct: 187  PSTNLESLGGMDDVIAQLMELIGLPILHPEIYLSTGVEPPRGVLLHGPPGCGKTSIANAL 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E  + F++V  P + S   GESEK +R LF +A+  AP ++FFDEID   AI  K   
Sbjct: 247  AGELQVPFISVSAPSIVSGMSGESEKKLRDLFDEAKQLAPCLVFFDEID---AITPKRDG 303

Query: 890  GVS--VSDRVMSQLLVELDGL-HQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            G    +  R+++QLL  +D +  Q+ +   V +I ATNRPD +D AL R GRFDR + + 
Sbjct: 304  GAQREMERRIVAQLLTSMDEISMQKTDGKPVIIIGATNRPDSLDSALRRAGRFDREICLN 363

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
             PNE  R  I +   + +    +++  +LA L+ G  GAD+  +   +   AI+      
Sbjct: 364  VPNEISRIHILKKMSQHLKIDGEIDFIKLAKLTPGFVGADLKALITASGTCAIK------ 417

Query: 1004 RITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMWTLI 1063
            RI                   Y +LSA    L  S  E D++G     +    +N+   I
Sbjct: 418  RI----------------FQEYADLSA----LSDSQMEVDQTGILDEKAMKNTANIIDPI 457

Query: 1064 --KSISLFLCRFPAGLSQSE 1081
               +I  F+  FP  L+  +
Sbjct: 458  PLSTIQKFIKNFPEPLNDEQ 477


>gi|390342478|ref|XP_785648.3| PREDICTED: nuclear valosin-containing protein [Strongylocentrotus
           purpuratus]
          Length = 976

 Score =  369 bits (947), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 229/593 (38%), Positives = 334/593 (56%), Gaps = 61/593 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P +GVLLHGPPG GKT LA   A +  +    +   E+VS   GESE+ + ++F+ 
Sbjct: 320 LGVSPPRGVLLHGPPGCGKTLLANAIAGELDLPYLKLAATEIVSGVSGESEENIRDLFEQ 379

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCR-TDGVLVIAATNRPD 557
           A   AP+V+FIDE+DAI P R+    E+ +R+VA LL  MD +   T  V+VI ATNR D
Sbjct: 380 AQALAPSVLFIDEIDAITPKRETAQREMERRIVAQLLACMDELNNGTAHVMVIGATNRVD 439

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
           S++PALRR GR DREI +               +P    R  ILH L   +    L  + 
Sbjct: 440 SLDPALRRAGRFDREISL--------------GIPDEKARTRILHVLCRKLR---LSGDF 482

Query: 618 EYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVL-----------HSTGTL 663
            Y ++A  T G+VGADL ALC EAA+  + R ++ +Q+    +           +ST T+
Sbjct: 483 SYHTLASLTPGYVGADLTALCREAAMAAVNRIFTDLQSKGKPILDAILGTSLQPNSTATI 542

Query: 664 FEFEGHSDTML--QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIAD 721
            + +   +  +  Q    ++ +  + +      +P   D+ T  ++        VS+ + 
Sbjct: 543 CDQQQVQEEAIPSQQVAATQQVAATLQG---DTTPTVEDMDTGSVTD------LVSKSSS 593

Query: 722 NFHNGVSDSSGGMFMS----------EKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
           N  +        M +S           +   L + + DF++A   V+PSA RE    +P 
Sbjct: 594 NDADTKETERYKMVLSWLKEHPPLSEAQLEGLSITMEDFKEALPNVQPSAKREGFATIPD 653

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V W+DVG    V+ +L  A+  P ++ EA+  +G   P GIL+ GPPGC KTL+A+A+A+
Sbjct: 654 VTWDDVGALEGVREELTMAILAPVRNPEAYHALGLTNPPGILLAGPPGCGKTLLAKAIAN 713

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           E+G+NF++VKGPEL + +VGESE+AVR  F +AR ++P +IFFDE+D L   R   SD  
Sbjct: 714 ESGINFISVKGPELMNMYVGESERAVRQCFQRARNSSPCVIFFDELDALCPRRSDVSDSG 773

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
           S S RV++QLL E+DGL  R  V ++ ATNRPD IDPA+LRPGR D++LYVG P+  DR 
Sbjct: 774 S-SARVVNQLLTEMDGLEARKQVFIMGATNRPDIIDPAVLRPGRMDKILYVGIPSNQDRI 832

Query: 952 EIFRIHLRKIPCS----SDVNIRELA--CLSEGCTGADISLICREAAISAIEE 998
            I R  + K  C      +VN+  LA     EG TGAD++   REA++SA+ +
Sbjct: 833 AILRT-ITKNGCKPVLEQEVNLMNLAEDARCEGFTGADLAAFVREASMSALRK 884



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/202 (43%), Positives = 129/202 (63%), Gaps = 3/202 (1%)

Query: 796 KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
           +H E ++++G  PP G+L+ GPPGC KTL+A A+A E  L +L +   E+ S   GESE+
Sbjct: 312 RHPEIYQQLGVSPPRGVLLHGPPGCGKTLLANAIAGELDLPYLKLAATEIVSGVSGESEE 371

Query: 856 AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ-RVNV 914
            +R LF +A+A APS++F DEID +   R  E+    +  R+++QLL  +D L+    +V
Sbjct: 372 NIRDLFEQAQALAPSVLFIDEIDAITPKR--ETAQREMERRIVAQLLACMDELNNGTAHV 429

Query: 915 TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC 974
            VI ATNR D +DPAL R GRFDR + +G P+E  R  I  +  RK+  S D +   LA 
Sbjct: 430 MVIGATNRVDSLDPALRRAGRFDREISLGIPDEKARTRILHVLCRKLRLSGDFSYHTLAS 489

Query: 975 LSEGCTGADISLICREAAISAI 996
           L+ G  GAD++ +CREAA++A+
Sbjct: 490 LTPGYVGADLTALCREAAMAAV 511



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 141/268 (52%), Gaps = 26/268 (9%)

Query: 392 LPNAQIE-----FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKG 446
           LPN Q       F  +      D+  L G+ +E  +   I+          +LGL    G
Sbjct: 636 LPNVQPSAKREGFATIPDVTWDDVGALEGVREELTMA--ILAPVRNPEAYHALGLTNPPG 693

Query: 447 VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 506
           +LL GPPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ + F  A  S+P V
Sbjct: 694 ILLAGPPGCGKTLLAKAIANESGINFISVKGPELMNMYVGESERAVRQCFQRARNSSPCV 753

Query: 507 VFIDELDAIAPARKDGGEE-LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRR 565
           +F DELDA+ P R D  +   S R+V  LL  MDG+     V ++ ATNRPD I+PA+ R
Sbjct: 754 IFFDELDALCPRRSDVSDSGSSARVVNQLLTEMDGLEARKQVFIMGATNRPDIIDPAVLR 813

Query: 566 PGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT- 624
           PGR+D+ + +               +PS   R+ IL  +       +L+ EV  +++A  
Sbjct: 814 PGRMDKILYV--------------GIPSNQDRIAILRTITKNGCKPVLEQEVNLMNLAED 859

Query: 625 ---HGFVGADLAALCNEAALVCLRRYSK 649
               GF GADLAA   EA++  LR+  K
Sbjct: 860 ARCEGFTGADLAAFVREASMSALRKVIK 887


>gi|354543412|emb|CCE40131.1| hypothetical protein CPAR2_101690 [Candida parapsilosis]
          Length = 824

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 253/676 (37%), Positives = 371/676 (54%), Gaps = 72/676 (10%)

Query: 407  EQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCA 465
            E   + LGGL      L +II    +   + +S G+ P +GVLL+GPPG GKT++A   A
Sbjct: 181  EITFTNLGGLDNVTTQLLEIIGLPILHPEIYTSTGVEPPRGVLLYGPPGCGKTTIANALA 240

Query: 466  HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG-- 523
             +  V    ++ P +VS   GESE+ L E+F+ A   AP ++F+DE+DAI P R DGG  
Sbjct: 241  GELKVPFINISAPSIVSGMSGESEKKLRELFEEAKSVAPCLIFMDEIDAITPKR-DGGAQ 299

Query: 524  EELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSF 579
             E+ +R+VA LL LMD +   +TD   V+VI ATNRPDS++ ALRR GR DREI ++   
Sbjct: 300  REMERRIVAQLLTLMDELTLDKTDNKPVIVIGATNRPDSLDSALRRAGRFDREICLN--- 356

Query: 580  LFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE---VEYLSMATHGFVGADLAALC 636
                       VP+  QR  IL A+   +   L D E      LS  T G+VGADL +L 
Sbjct: 357  -----------VPNETQRESILRAMTKNIR--LKDGENFGYRELSKLTPGYVGADLKSLV 403

Query: 637  NEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASP 696
              A +  ++R                +FE      TM +  D    I E + +      P
Sbjct: 404  TAAGVAAIKR----------------IFE------TMSEQQDEGHQIQEDNMEI----DP 437

Query: 697  CTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMK 756
                   ++LS     +  + +++      +  + G +  +E+   L +   DF KA   
Sbjct: 438  IVGKESEAILSKRFGSKTDIEQLS-TIQKFLGRNPGPL-TAEQLEPLFITYEDFVKALPT 495

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            V+P+A RE    VP V W++VG   +V+ +L   +  P K  E + ++G   P+G+LM+G
Sbjct: 496  VQPTAKREGFATVPDVTWKNVGALAKVRMELHMCIVQPVKKPELYLKVGISAPSGVLMWG 555

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGC KTL+A+AVA+E+  NF++VKGPEL +K+VGESEKAVR +F +A A+ P IIFFDE
Sbjct: 556  PPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESEKAVRQVFQRAMASKPCIIFFDE 615

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            +D L   R  ++     S RV++ LL ELDGL  R  V VI ATNRPD IDPA+LRPGR 
Sbjct: 616  LDALVPRR--DASMSESSSRVVNTLLTELDGLSDRNGVFVIGATNRPDMIDPAMLRPGRL 673

Query: 937  DRLLYVGPPNETDREEIFR-IHLRK-IPCSSDVNIRELACLSEGC---TGADISLICREA 991
            D+ LY+  P+ T+R EI + I L    P +S+V++ E++   E C   +GAD+S + +EA
Sbjct: 674  DKTLYIELPSATERFEILKTITLANGTPIASNVDLEEISN-DERCRNFSGADLSSLVKEA 732

Query: 992  AISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVH----SNAEADESGY 1047
             ISA++ N   S+  ++ L  +  +   S     + +   FQR +     S ++ D   Y
Sbjct: 733  GISALKRNFFGSQ-KLEMLDASGFYNDSSPEEHIEIIREDFQRALFTVRPSVSDRDRLKY 791

Query: 1048 QLRPSKSIGSNMWTLI 1063
            + R +K +G   W +I
Sbjct: 792  E-RLNKKLG---WDVI 803



 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 174/348 (50%), Gaps = 34/348 (9%)

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
            G ++K +  D  K+ +K      R+     P++ + ++GG   V TQL+E +  P  H E
Sbjct: 153  GTSMKRKAKDTAKSALK---KQKRKFNHTPPEITFTNLGGLDNVTTQLLEIIGLPILHPE 209

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
             +   G  PP G+L++GPPGC KT +A A+A E  + F+ +  P + S   GESEK +R 
Sbjct: 210  IYTSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSIVSGMSGESEKKLRE 269

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKESDGVS--VSDRVMSQLLVELDGL----HQRVN 913
            LF +A++ AP +IF DEID   AI  K   G    +  R+++QLL  +D L         
Sbjct: 270  LFEEAKSVAPCLIFMDEID---AITPKRDGGAQREMERRIVAQLLTLMDELTLDKTDNKP 326

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNI--RE 971
            V VI ATNRPD +D AL R GRFDR + +  PNET RE I R   + I      N   RE
Sbjct: 327  VIVIGATNRPDSLDSALRRAGRFDREICLNVPNETQRESILRAMTKNIRLKDGENFGYRE 386

Query: 972  LACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAK 1031
            L+ L+ G  GAD+  +   A ++AI+   +    TM          Q  E H  +E + +
Sbjct: 387  LSKLTPGYVGADLKSLVTAAGVAAIKRIFE----TMSE--------QQDEGHQIQEDNME 434

Query: 1032 FQRLVHSNAEADESGYQLRPSKSIGSNM-WTLIKSISLFLCRFPAGLS 1078
               +V   +EA         SK  GS      + +I  FL R P  L+
Sbjct: 435  IDPIVGKESEA-------ILSKRFGSKTDIEQLSTIQKFLGRNPGPLT 475


>gi|151941136|gb|EDN59514.1| ribosome export [Saccharomyces cerevisiae YJM789]
          Length = 837

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 241/677 (35%), Positives = 370/677 (54%), Gaps = 89/677 (13%)

Query: 385  KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
            K  +EGT    + + +  ++     +  LGG+    A L ++I +         S G+ P
Sbjct: 179  KRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEP 238

Query: 444  TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
             +GVLLHGPPG GKTS+A   A +  V   +++ P VVS   GESE+ + ++FD A   A
Sbjct: 239  PRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLA 298

Query: 504  PAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPD 557
            P +VF DE+DAI P R DGG   E+ +R+VA LL  MD +   +T+G  V++I ATNRPD
Sbjct: 299  PCLVFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPD 357

Query: 558  SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            S++ ALRR GR DREI ++              VP+   RL IL  +   ++   +D  +
Sbjct: 358  SLDAALRRAGRFDREICLN--------------VPNEVSRLHILKKMSDNLK---IDGAI 400

Query: 618  EYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
            ++  +A  T GFVGADL AL   A    ++R    QT +++  +  T    +   D M  
Sbjct: 401  DFAKLAKLTPGFVGADLKALVTAAGTCAIKRI--FQTYANIKSTPTT--ATDSSEDNM-- 454

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
            + D + N  ESS   L + +     LP S+          V +   N+   +S       
Sbjct: 455  EIDETANGDESS---LKNTANMIDPLPLSV----------VQQFIRNYPEPLS------- 494

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
              E+   L ++  DF KA   ++P+A RE    VP V W +VG  + V+ +L  A+  P 
Sbjct: 495  -GEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPI 553

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            K  E ++++G   P G+L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+
Sbjct: 554  KRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESER 613

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            ++R +F +ARA+ P +IFFDE+D L   R  ++     S RV++ LL ELDGL+ R  + 
Sbjct: 614  SIRQVFTRARASVPCVIFFDELDALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIF 671

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELA 973
            VI ATNRPD IDPA+LRPGR D+ L++  PN  ++ +I +   +    P SSDV+  E+ 
Sbjct: 672  VIGATNRPDMIDPAMLRPGRLDKTLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEI- 730

Query: 974  CLSEGC---TGADISLICREAAI--------------SAIEENLDASR------------ 1004
              +E C   +GAD++ + RE+++              S ++ +LD               
Sbjct: 731  IRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEI 790

Query: 1005 -ITMQHLKTAIRHVQPS 1020
             +TM   ++A+R ++PS
Sbjct: 791  IVTMSDFRSALRKIKPS 807


>gi|256271958|gb|EEU06977.1| Rix7p [Saccharomyces cerevisiae JAY291]
 gi|349579694|dbj|GAA24855.1| K7_Rix7p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 837

 Score =  369 bits (946), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 241/677 (35%), Positives = 370/677 (54%), Gaps = 89/677 (13%)

Query: 385  KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
            K  +EGT    + + +  ++     +  LGG+    A L ++I +         S G+ P
Sbjct: 179  KRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEP 238

Query: 444  TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
             +GVLLHGPPG GKTS+A   A +  V   +++ P VVS   GESE+ + ++FD A   A
Sbjct: 239  PRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLA 298

Query: 504  PAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPD 557
            P +VF DE+DAI P R DGG   E+ +R+VA LL  MD +   +T+G  V++I ATNRPD
Sbjct: 299  PCLVFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPD 357

Query: 558  SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            S++ ALRR GR DREI ++              VP+   RL IL  +   ++   +D  +
Sbjct: 358  SLDAALRRAGRFDREICLN--------------VPNEVSRLHILKKMSDNLK---IDGAI 400

Query: 618  EYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
            ++  +A  T GFVGADL AL   A    ++R    QT +++  +  T    +   D M  
Sbjct: 401  DFAKLAKLTPGFVGADLKALVTAAGTCAIKRI--FQTYANIKSTPTT--ATDSSEDNM-- 454

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
            + D + N  ESS   L + +     LP S+          V +   N+   +S       
Sbjct: 455  EIDETANGDESS---LKNTANMIDPLPLSV----------VQQFIRNYPEPLS------- 494

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
              E+   L ++  DF KA   ++P+A RE    VP V W +VG  + V+ +L  A+  P 
Sbjct: 495  -GEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPI 553

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            K  E ++++G   P G+L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+
Sbjct: 554  KRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESER 613

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            ++R +F +ARA+ P +IFFDE+D L   R  ++     S RV++ LL ELDGL+ R  + 
Sbjct: 614  SIRQVFTRARASVPCVIFFDELDALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIF 671

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELA 973
            VI ATNRPD IDPA+LRPGR D+ L++  PN  ++ +I +   +    P SSDV+  E+ 
Sbjct: 672  VIGATNRPDMIDPAMLRPGRLDKTLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEI- 730

Query: 974  CLSEGC---TGADISLICREAAI--------------SAIEENLDASR------------ 1004
              +E C   +GAD++ + RE+++              S ++ +LD               
Sbjct: 731  IRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEI 790

Query: 1005 -ITMQHLKTAIRHVQPS 1020
             +TM   ++A+R ++PS
Sbjct: 791  IVTMSDFRSALRKIKPS 807


>gi|190406014|gb|EDV09281.1| ribosome biogenesis ATPase RIX7 [Saccharomyces cerevisiae RM11-1a]
 gi|259147956|emb|CAY81205.1| Rix7p [Saccharomyces cerevisiae EC1118]
 gi|323303931|gb|EGA57711.1| Rix7p [Saccharomyces cerevisiae FostersB]
 gi|365764262|gb|EHN05786.1| Rix7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 837

 Score =  369 bits (946), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 241/677 (35%), Positives = 370/677 (54%), Gaps = 89/677 (13%)

Query: 385  KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
            K  +EGT    + + +  ++     +  LGG+    A L ++I +         S G+ P
Sbjct: 179  KRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEP 238

Query: 444  TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
             +GVLLHGPPG GKTS+A   A +  V   +++ P VVS   GESE+ + ++FD A   A
Sbjct: 239  PRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLA 298

Query: 504  PAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPD 557
            P +VF DE+DAI P R DGG   E+ +R+VA LL  MD +   +T+G  V++I ATNRPD
Sbjct: 299  PCLVFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPD 357

Query: 558  SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            S++ ALRR GR DREI ++              VP+   RL IL  +   ++   +D  +
Sbjct: 358  SLDAALRRAGRFDREICLN--------------VPNEVSRLHILKKMSDNLK---IDGAI 400

Query: 618  EYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
            ++  +A  T GFVGADL AL   A    ++R    QT +++  +  T    +   D M  
Sbjct: 401  DFAKLAKLTPGFVGADLKALVTAAGTCAIKRI--FQTYANIKSTPTT--ATDSSEDNM-- 454

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
            + D + N  ESS   L + +     LP S+          V +   N+   +S       
Sbjct: 455  EIDETANGDESS---LKNTANMIDPLPLSV----------VQQFIRNYPEPLS------- 494

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
              E+   L ++  DF KA   ++P+A RE    VP V W +VG  + V+ +L  A+  P 
Sbjct: 495  -GEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPI 553

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            K  E ++++G   P G+L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+
Sbjct: 554  KRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESER 613

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            ++R +F +ARA+ P +IFFDE+D L   R  ++     S RV++ LL ELDGL+ R  + 
Sbjct: 614  SIRQVFTRARASVPCVIFFDELDALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIF 671

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELA 973
            VI ATNRPD IDPA+LRPGR D+ L++  PN  ++ +I +   +    P SSDV+  E+ 
Sbjct: 672  VIGATNRPDMIDPAMLRPGRLDKTLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEI- 730

Query: 974  CLSEGC---TGADISLICREAAI--------------SAIEENLDASR------------ 1004
              +E C   +GAD++ + RE+++              S ++ +LD               
Sbjct: 731  IRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEI 790

Query: 1005 -ITMQHLKTAIRHVQPS 1020
             +TM   ++A+R ++PS
Sbjct: 791  IVTMSDFRSALRKIKPS 807


>gi|346465603|gb|AEO32646.1| hypothetical protein [Amblyomma maculatum]
          Length = 545

 Score =  368 bits (945), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 227/583 (38%), Positives = 321/583 (55%), Gaps = 86/583 (14%)

Query: 429  SSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGES 488
            +S     L  LG+ P +G LLHGPPG GKT LA   A +  + +  V  PE+V+   GES
Sbjct: 1    ASQASGGLQRLGVVPPRGFLLHGPPGCGKTLLAHAIAGELELPMIRVAAPEIVAGVSGES 60

Query: 489  EQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTD--- 545
            E+ + E+FD A  SAP V FIDE+DA+ P R+    E+ +R+VA LL+ +D + + +   
Sbjct: 61   EERIRELFDKAVNSAPCVFFIDEIDAVTPKRETAQREMERRIVAQLLSSLDDLSQRELPA 120

Query: 546  GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
             VLVI ATNRPDS++PALRR GR DREI +               +P+ A R  IL  L 
Sbjct: 121  EVLVIGATNRPDSLDPALRRAGRFDREICL--------------GIPNEAARERILAVLC 166

Query: 606  SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFE 665
              +     D ++  ++  T G+VGADL AL  EA +  + R                   
Sbjct: 167  RKLTLGT-DVQLSVIAHRTPGYVGADLMALTREATMSAINRI------------------ 207

Query: 666  FEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPL-RGTVSEIADNFH 724
            F G  + +       +   E  R+ LD A     D+P        PL    +  +  + H
Sbjct: 208  FRGIEEGV-------KATGEGPRNRLDMAISLLKDVP--------PLDEAQLKNLCVDIH 252

Query: 725  NGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVK 784
                                    DFE+A   V+PSA RE    VP V W+DVG    ++
Sbjct: 253  ------------------------DFEEALKLVQPSAKREGFATVPDVTWDDVGALTSIR 288

Query: 785  TQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPE 844
              L  A+  P +H++ ++ +G   PTGIL+ GPPGC KTL+A+A+A+E+G+NF++VKGPE
Sbjct: 289  EALQVAILAPVRHRDKYEAMGLVTPTGILLHGPPGCGKTLLAKAIANESGINFISVKGPE 348

Query: 845  LFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVE 904
            L + +VGESE+AVR  F +AR +AP +IFFDE+D L   R   +DG S S RV++QLL E
Sbjct: 349  LLNMYVGESERAVRQCFQRARNSAPCVIFFDELDALCPRRSDSADGGSAS-RVVNQLLTE 407

Query: 905  LDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KI 961
            +DGL  R  V V+AATNRPD IDPA+LRPGR D +LYVG P+  +R EI +   R   + 
Sbjct: 408  MDGLEPRKQVFVLAATNRPDIIDPAMLRPGRLDEVLYVGLPSAAERVEILKTLTRNGTRP 467

Query: 962  PCSSDVNIRELA----CLSEGCTGADISLICREAAISAIEENL 1000
            P  S V++ E+     C  E  +GAD++ + R+A++ A+ + L
Sbjct: 468  PLQSAVSLEEIGKDERC--ESFSGADLAALVRQASVIALTKYL 508



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/271 (37%), Positives = 145/271 (53%), Gaps = 22/271 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      D+  L  + +  A+   I+     +    ++GL    G+LLHG
Sbjct: 263 PSAKREGFATVPDVTWDDVGALTSIRE--ALQVAILAPVRHRDKYEAMGLVTPTGILLHG 320

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ + F  A  SAP V+F DE
Sbjct: 321 PPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQCFQRARNSAPCVIFFDE 380

Query: 512 LDAIAPARKDGGEELS-QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLD 570
           LDA+ P R D  +  S  R+V  LL  MDG+     V V+AATNRPD I+PA+ RPGRLD
Sbjct: 381 LDALCPRRSDSADGGSASRVVNQLLTEMDGLEPRKQVFVLAATNRPDIIDPAMLRPGRLD 440

Query: 571 REIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HG 626
             + + +              PS A+R+EIL  L        L S V    +        
Sbjct: 441 EVLYVGL--------------PSAAERVEILKTLTRNGTRPPLQSAVSLEEIGKDERCES 486

Query: 627 FVGADLAALCNEAALVCLRRYSKIQTSSDVL 657
           F GADLAAL  +A+++ L +Y K  +   +L
Sbjct: 487 FSGADLAALVRQASVIALTKYLKDNSEGQLL 517


>gi|345485297|ref|XP_003425235.1| PREDICTED: LOW QUALITY PROTEIN: nuclear valosin-containing
            protein-like [Nasonia vitripennis]
          Length = 884

 Score =  368 bits (945), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 230/627 (36%), Positives = 344/627 (54%), Gaps = 77/627 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
             S +GG +K    + ++++        + LG+ P +G LLHGPPG GKT LA   A +  
Sbjct: 276  FSDVGGNTKVLETVANLLVHMKHPEVYTKLGISPPRGFLLHGPPGCGKTLLAHAIAGELQ 335

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            + L  V  PE+V+   GESEQ + E+FD A   AP ++F+DE+DA+AP R +   E+ +R
Sbjct: 336  MPLLKVAAPELVAGVSGESEQRIRELFDQAIAIAPCILFLDEIDAVAPHRANAQREMERR 395

Query: 530  MVATLLNLMDGV-CRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +VA LL+ +D +  +T+G  VLV+ ATNRPDS++PALRR GR DRE+ +           
Sbjct: 396  IVAQLLSCLDELGSKTNGNKVLVLGATNRPDSLDPALRRAGRFDREVSL----------- 444

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGFVGADLAALCNEAALVCL 644
                +P    R  IL    + +    L +EV  E ++  T GFVGAD         LV L
Sbjct: 445  ---GIPDKDARTAILKVHTANV---TLSNEVSLENIASLTPGFVGAD---------LVAL 489

Query: 645  RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
             R + +   + VL       + +  +     + + +  I E     L             
Sbjct: 490  IREAAMAAVNRVLLKKXRPKKKQKRNQRTEDEPEMNMQIVEEPGKKL------------- 536

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
                         +I    HN           +E+   L +E  DF+ A   V+PSA RE
Sbjct: 537  ------------MDILSWLHNEPP------LTTEQLALLCVEEQDFDVALKSVQPSAKRE 578

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
                VP V W+D+G  ++++ +L   +  P +H E F  +G   PTG+L+ GPPGC KTL
Sbjct: 579  GFATVPDVTWDDIGSLQDIRQELQMTILAPIRHSEQFASLGLTTPTGVLLCGPPGCGKTL 638

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            +A+A+A+EAG+NF++VKGPEL + +VGESEKAVR  F +AR +AP +IFFDE+D L   R
Sbjct: 639  LAKAIANEAGINFISVKGPELLNMYVGESEKAVRQCFMRARNSAPCVIFFDELDALCPKR 698

Query: 885  GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
              E D  S + RV++Q+L E+DG+  R +V ++AA+NRPD IDPA+LRPGR D++LYVG 
Sbjct: 699  S-EGDS-SATSRVVNQMLTEMDGVEGRKDVFLMAASNRPDIIDPAVLRPGRLDKILYVGL 756

Query: 945  PNETDREEIFRIHLR---KIPCSSDVNIRELA----CLSEGCTGADISLICREAAISAIE 997
            P  +DR +I R   +   +   ++DV++ ++     C  EG TGAD++   REA + A+ 
Sbjct: 757  PCASDRVDILRALTKNGTRPKLAADVSLEDVGRSDRC--EGYTGADLAAFVREAGVEALR 814

Query: 998  ENLD----ASRITMQHLKTAIRHVQPS 1020
            E +     ++ I  +HL  A   ++PS
Sbjct: 815  EIMSGLPGSAEICARHLAAAFDKIRPS 841



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 145/244 (59%), Gaps = 12/244 (4%)

Query: 763  REVILEVPKVKWEDVGGQREVKTQLMEAVE---WPQKHQEAFKRIGTRPPTGILMFGPPG 819
            R++ +  P VK+ DVGG     T+++E V       KH E + ++G  PP G L+ GPPG
Sbjct: 265  RDMPVVNPTVKFSDVGGN----TKVLETVANLLVHMKHPEVYTKLGISPPRGFLLHGPPG 320

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
            C KTL+A A+A E  +  L V  PEL +   GESE+ +R LF +A A AP I+F DEID 
Sbjct: 321  CGKTLLAHAIAGELQMPLLKVAAPELVAGVSGESEQRIRELFDQAIAIAPCILFLDEIDA 380

Query: 880  LAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRF 936
            +A  R        +  R+++QLL  LD L  + N   V V+ ATNRPD +DPAL R GRF
Sbjct: 381  VAPHRANAQR--EMERRIVAQLLSCLDELGSKTNGNKVLVLGATNRPDSLDPALRRAGRF 438

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + +G P++  R  I ++H   +  S++V++  +A L+ G  GAD+  + REAA++A+
Sbjct: 439  DREVSLGIPDKDARTAILKVHTANVTLSNEVSLENIASLTPGFVGADLVALIREAAMAAV 498

Query: 997  EENL 1000
               L
Sbjct: 499  NRVL 502



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 138/258 (53%), Gaps = 21/258 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+         +SLGL    GVLL G
Sbjct: 573 PSAKREGFATVPDVTWDDIGSLQDIRQELQMT--ILAPIRHSEQFASLGLTTPTGVLLCG 630

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A+++G+N  +V GPE+++   GESE+A+ + F  A  SAP V+F DE
Sbjct: 631 PPGCGKTLLAKAIANEAGINFISVKGPELLNMYVGESEKAVRQCFMRARNSAPCVIFFDE 690

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           LDA+ P R +G    + R+V  +L  MDGV     V ++AA+NRPD I+PA+ RPGRLD+
Sbjct: 691 LDALCPKRSEGDSSATSRVVNQMLTEMDGVEGRKDVFLMAASNRPDIIDPAVLRPGRLDK 750

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P  + R++IL AL        L ++V    +       G+
Sbjct: 751 ILYV--------------GLPCASDRVDILRALTKNGTRPKLAADVSLEDVGRSDRCEGY 796

Query: 628 VGADLAALCNEAALVCLR 645
            GADLAA   EA +  LR
Sbjct: 797 TGADLAAFVREAGVEALR 814


>gi|6322994|ref|NP_013066.1| putative AAA family ATPase RIX7 [Saccharomyces cerevisiae S288c]
 gi|2492526|sp|Q07844.1|RIX7_YEAST RecName: Full=Ribosome biogenesis ATPase RIX7
 gi|1360222|emb|CAA97483.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|285813391|tpg|DAA09287.1| TPA: putative AAA family ATPase RIX7 [Saccharomyces cerevisiae S288c]
 gi|392297726|gb|EIW08825.1| Rix7p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 837

 Score =  368 bits (945), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 241/677 (35%), Positives = 370/677 (54%), Gaps = 89/677 (13%)

Query: 385  KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
            K  +EGT    + + +  ++     +  LGG+    A L ++I +         S G+ P
Sbjct: 179  KRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEP 238

Query: 444  TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
             +GVLLHGPPG GKTS+A   A +  V   +++ P VVS   GESE+ + ++FD A   A
Sbjct: 239  PRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLA 298

Query: 504  PAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPD 557
            P +VF DE+DAI P R DGG   E+ +R+VA LL  MD +   +T+G  V++I ATNRPD
Sbjct: 299  PCLVFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPD 357

Query: 558  SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            S++ ALRR GR DREI ++              VP+   RL IL  +   ++   +D  +
Sbjct: 358  SLDAALRRAGRFDREICLN--------------VPNEVSRLHILKKMSDNLK---IDGAI 400

Query: 618  EYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
            ++  +A  T GFVGADL AL   A    ++R    QT +++  +  T    +   D M  
Sbjct: 401  DFAKLAKLTPGFVGADLKALVTAAGTCAIKRI--FQTYANIKSTPTT--ATDSSEDNM-- 454

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
            + D + N  ESS   L + +     LP S+          V +   N+   +S       
Sbjct: 455  EIDETANGDESS---LKNTANMIDPLPLSV----------VQQFIRNYPEPLS------- 494

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
              E+   L ++  DF KA   ++P+A RE    VP V W +VG  + V+ +L  A+  P 
Sbjct: 495  -GEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPI 553

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            K  E ++++G   P G+L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+
Sbjct: 554  KRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESER 613

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            ++R +F +ARA+ P +IFFDE+D L   R  ++     S RV++ LL ELDGL+ R  + 
Sbjct: 614  SIRQVFTRARASVPCVIFFDELDALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIF 671

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELA 973
            VI ATNRPD IDPA+LRPGR D+ L++  PN  ++ +I +   +    P SSDV+  E+ 
Sbjct: 672  VIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEI- 730

Query: 974  CLSEGC---TGADISLICREAAI--------------SAIEENLDASR------------ 1004
              +E C   +GAD++ + RE+++              S ++ +LD               
Sbjct: 731  IRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEI 790

Query: 1005 -ITMQHLKTAIRHVQPS 1020
             +TM   ++A+R ++PS
Sbjct: 791  IVTMSDFRSALRKIKPS 807


>gi|194865492|ref|XP_001971456.1| GG14421 [Drosophila erecta]
 gi|190653239|gb|EDV50482.1| GG14421 [Drosophila erecta]
          Length = 935

 Score =  368 bits (945), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 234/691 (33%), Positives = 369/691 (53%), Gaps = 93/691 (13%)

Query: 402  VQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
            VQ T E     +GG+      L +++I          LGL P++G+LLHGPPG GKT LA
Sbjct: 239  VQHTTES-FRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLA 297

Query: 462  RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
            R  +    + L  +   E++    GESE+ + EVF+ A   +P V+FIDE+DAI   R+ 
Sbjct: 298  RAISGQLKMPLLEIPATELIGGISGESEERIREVFEQAIGYSPCVLFIDEIDAIGGNRQW 357

Query: 522  GGEELSQRMVATLLNLMDGVCRTD---GVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
              +++ +R+V+ L++ +D +   +    V+VIAAT RPD ++P LRR GR D EI I   
Sbjct: 358  ASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIH-- 415

Query: 579  FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALC 636
                        +PS  +R EIL     G+    +D ++ Y  +A  T G+VGADL AL 
Sbjct: 416  ------------IPSRKERREILRIQCEGLS---IDPKLNYDKIAELTPGYVGADLMALV 460

Query: 637  NEAALVCLRR-----YSKIQTSSDVLHSTGTLFE------------FEGHSDTMLQDSDC 679
            + AA V ++R     + ++  +S+   +T TL +             E       +DSD 
Sbjct: 461  SRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPSEEAGGKAVAESKDKETAKDSDA 520

Query: 680  SR----NITESSRDCLDSASPCTSD-------------------------LPTSLLSSSL 710
             +    +   S +D  +  SP T                           +    +++  
Sbjct: 521  EQKADGDKETSEKDKSEGDSPTTKSPEKVTNGKSPKKSPKKSPEKPTEAAMEVDEVATKE 580

Query: 711  PLRGTVSEI----ADNFH-------NGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRP 759
            P +    E+     D ++           D+    F     C   ++ VD  K    ++P
Sbjct: 581  PKKDVEQEVDFSSNDEYYEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAIKV---MQP 637

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            SA RE  + VP   W+D+G   +++ +L  AV  P K+ E  +R+G   P+G+L+ GPPG
Sbjct: 638  SAKREGFVTVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPG 697

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
            C KTL+A+A+A+EAG+NF++VKGPEL + +VGESE+AVR+ F +AR +AP +IFFDE D 
Sbjct: 698  CGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDS 757

Query: 880  LAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            L   R    DG +   R+++QLL E+DG+ +R  V ++AATNRPD IDPA+LRPGR D +
Sbjct: 758  LCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTI 817

Query: 940  LYVGPPNETDREEIFRIHLR--KIPC-SSDVNIRELACLSEGCTGADISLICREAAISAI 996
            LYVG P +++R EI +   +  K P  + DV++ E+A  +EG TGAD++ + ++A++ ++
Sbjct: 818  LYVGFPEQSERTEILKATTKNGKRPALADDVDLEEIAAQTEGYTGADLAGLVKQASMFSL 877

Query: 997  EENLDASRITM-------QHLKTAIRHVQPS 1020
             ++L+     +       QH K A++ ++PS
Sbjct: 878  RQSLNNGDTKLDDLCVRSQHFKEALQQLRPS 908



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/259 (38%), Positives = 142/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V  T   DI  L  + +E  +   ++        L  LGL    GVLL G
Sbjct: 637 PSAKREGFVTVPDTTWDDIGALEKIREELKLA--VLAPVKYPEMLERLGLTAPSGVLLCG 694

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A+++G+N  +V GPE+++   GESE+A+   F  A  SAP V+F DE
Sbjct: 695 PPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDE 754

Query: 512 LDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
            D++ P R DGG+      R+V  LL  MDGV    GV ++AATNRPD I+PA+ RPGRL
Sbjct: 755 FDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRL 814

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL--DSEVEYLSMATHGF 627
           D       + L+          P  ++R EIL A     +   L  D ++E ++  T G+
Sbjct: 815 D-------TILY-------VGFPEQSERTEILKATTKNGKRPALADDVDLEEIAAQTEGY 860

Query: 628 VGADLAALCNEAALVCLRR 646
            GADLA L  +A++  LR+
Sbjct: 861 TGADLAGLVKQASMFSLRQ 879


>gi|149238059|ref|XP_001524906.1| ribosome biogenesis ATPase RIX7 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451503|gb|EDK45759.1| ribosome biogenesis ATPase RIX7 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 832

 Score =  368 bits (945), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 242/612 (39%), Positives = 335/612 (54%), Gaps = 79/612 (12%)

Query: 409 DISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           D S LGG+      L +II    +   +  S G+ P +GVLL+GPPG GKT++A   A +
Sbjct: 193 DFSTLGGIDNVTTQLLEIIGLPILHPEIYLSTGVEPPRGVLLYGPPGCGKTTVANALAGE 252

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-EL 526
             V    ++ P +VS   GESE+ L ++F+ A   AP ++F+DE+DAI P R  G + E+
Sbjct: 253 LKVPFINISAPSIVSGMSGESEKKLRDLFEEAKSVAPCIIFMDEIDAITPKRDGGAQREM 312

Query: 527 SQRMVATLLNLMDGV----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
            +R+VA LL LMD +         V+VI ATNRPDS++ ALRR GR DREI ++      
Sbjct: 313 ERRIVAQLLTLMDELRMENTNNKPVIVIGATNRPDSLDSALRRAGRFDREICLN------ 366

Query: 583 LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY----LSMATHGFVGADLAALCNE 638
                   VP+ +QR  IL A+   ++   LD E  +    LS  T G+VGADL +L   
Sbjct: 367 --------VPNESQRESILRAMTKDIK---LDGESLFNYRELSKLTPGYVGADLKSLVTA 415

Query: 639 AALVCLRRY--SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASP 696
           A +  ++R   S IQ             E E  SD M  D D  R +    +  L  A  
Sbjct: 416 AGVFAIKRIFESLIQRED----------EKEAVSDGM--DIDV-RELLNDQQGALAQAFS 462

Query: 697 CTSD------LPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDF 750
             SD      +   L +   PL G                       E+   L +   DF
Sbjct: 463 KKSDVEKLSTIQKFLAAHPDPLTG-----------------------EQLEPLSITYDDF 499

Query: 751 EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
             A   V+PSA RE    VP V W  VG    ++T+L   +  P K  E F ++G   P+
Sbjct: 500 INALHTVQPSAKREGFATVPDVTWNKVGALSSIRTELHMCIVQPVKKPELFLKVGITAPS 559

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           G+LM+GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESEKAVR +F +ARA+ P 
Sbjct: 560 GVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPC 619

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
           IIFFDE+D L   R  ++     S RV++ LL ELDGL+ R  V VI ATNRPD IDPA+
Sbjct: 620 IIFFDELDALVPRR--DNSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAM 677

Query: 931 LRPGRFDRLLYVGPPNETDREEIFRIHLR--KIPCSSDVNIRELACLSEGC---TGADIS 985
           LRPGR D+ LY+  P   +R EI +  +R  + P  +DVN+ E+A   E C   +GAD+S
Sbjct: 678 LRPGRLDKTLYIQLPTPDERFEILKTIVRANQSPIDNDVNLHEIAH-EERCRNFSGADLS 736

Query: 986 LICREAAISAIE 997
            + +EAA+SA++
Sbjct: 737 SLVKEAAVSALK 748



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 137/243 (56%), Gaps = 11/243 (4%)

Query: 763 REVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
           R+V    P + +  +GG   V TQL+E +  P  H E +   G  PP G+L++GPPGC K
Sbjct: 183 RKVNYTTPTLDFSTLGGIDNVTTQLLEIIGLPILHPEIYLSTGVEPPRGVLLYGPPGCGK 242

Query: 823 TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
           T +A A+A E  + F+ +  P + S   GESEK +R LF +A++ AP IIF DEID   A
Sbjct: 243 TTVANALAGELKVPFINISAPSIVSGMSGESEKKLRDLFEEAKSVAPCIIFMDEID---A 299

Query: 883 IRGKESDGVS--VSDRVMSQLLVELDGLH-QRVN---VTVIAATNRPDKIDPALLRPGRF 936
           I  K   G    +  R+++QLL  +D L  +  N   V VI ATNRPD +D AL R GRF
Sbjct: 300 ITPKRDGGAQREMERRIVAQLLTLMDELRMENTNNKPVIVIGATNRPDSLDSALRRAGRF 359

Query: 937 DRLLYVGPPNETDREEIFRIHLRKIPCSSD--VNIRELACLSEGCTGADISLICREAAIS 994
           DR + +  PNE+ RE I R   + I    +   N REL+ L+ G  GAD+  +   A + 
Sbjct: 360 DREICLNVPNESQRESILRAMTKDIKLDGESLFNYRELSKLTPGYVGADLKSLVTAAGVF 419

Query: 995 AIE 997
           AI+
Sbjct: 420 AIK 422



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 137/241 (56%), Gaps = 20/241 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           +K+G LS     L   I+    K  L   +G+    GVL+ GPPG GKT LA+  A++S 
Sbjct: 524 NKVGALSSIRTELHMCIVQPVKKPELFLKVGITAPSGVLMWGPPGCGKTLLAKAVANESR 583

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            N  ++ GPE++++  GESE+A+ +VF  A  S P ++F DELDA+ P R +   E S R
Sbjct: 584 ANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDNSMSESSSR 643

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V TLL  +DG+    GV VI ATNRPD I+PA+ RPGRLD+ + I +            
Sbjct: 644 VVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIQL------------ 691

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGFVGADLAALCNEAALVCLR 645
             P+P +R EIL  ++     S +D++V    +A       F GADL++L  EAA+  L+
Sbjct: 692 --PTPDERFEILKTIVRA-NQSPIDNDVNLHEIAHEERCRNFSGADLSSLVKEAAVSALK 748

Query: 646 R 646
           R
Sbjct: 749 R 749


>gi|410084383|ref|XP_003959768.1| hypothetical protein KAFR_0L00260 [Kazachstania africana CBS 2517]
 gi|372466361|emb|CCF60633.1| hypothetical protein KAFR_0L00260 [Kazachstania africana CBS 2517]
          Length = 794

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 223/604 (36%), Positives = 343/604 (56%), Gaps = 79/604 (13%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +  LGG+    A L ++I    +   + ++ G+ P +GVLLHGPPG GKT++A   A + 
Sbjct: 182  LKSLGGMDDVVAQLMELIGLPILHPEIYAATGIEPPRGVLLHGPPGCGKTTIANALAGEL 241

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG--EEL 526
             V    ++ P +VS   GESE+ L +VF  A   AP ++F DE+DAI P R DGG   E+
Sbjct: 242  NVPFINISAPSIVSGMSGESEKKLRDVFQEAKSIAPCLIFFDEIDAITPKR-DGGAQREM 300

Query: 527  SQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
             +R+VA LL  MD +    TDG  V+VI ATNRPD+++ ALRR GR DREI ++      
Sbjct: 301  EKRIVAQLLTSMDELTMEHTDGKPVIVIGATNRPDALDSALRRAGRFDREICLN------ 354

Query: 583  LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAA 640
                    VP+   RL IL  + S ++   +D  +++  +A  T GFVGADL AL   A 
Sbjct: 355  --------VPNEISRLHILKKMASNLK---IDGTIDFSKLAKLTPGFVGADLKALTTAAG 403

Query: 641  LVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSD 700
               ++R                +F+  G  + M  D+D                      
Sbjct: 404  TCAIKR----------------IFQSYGDMEDMDVDTDLKN------------------- 428

Query: 701  LPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPS 760
              T+ L   LPL   + +  +NF + ++        +E+   L ++  DF KA   ++P+
Sbjct: 429  --TANLIDPLPL-SIIQKFINNFPDPLN--------NEQLNDLSIKYDDFLKALPTIQPT 477

Query: 761  AMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGC 820
            A RE    VP V W  VG  ++++ +L  A+  P K  E ++++G   P G+L++GPPGC
Sbjct: 478  AKREGFATVPDVSWSSVGALQKIRLELNMAIVQPIKRPELYEKVGINAPAGVLLWGPPGC 537

Query: 821  SKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGL 880
             KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +FA+ARA+ P IIFFDE+D L
Sbjct: 538  GKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFARARASIPCIIFFDELDAL 597

Query: 881  AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLL 940
               R  ++     S RV++ LL ELDGL+ R  + V+ ATNRPD IDPA+LRPGR D+ L
Sbjct: 598  VPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIFVVGATNRPDMIDPAMLRPGRLDKTL 655

Query: 941  YVGPPNETDREEIFRIHLRK--IPCSSDVNIRELA--CLSEGCTGADISLICREAAISAI 996
            ++  PN  ++ +IF+  +R    P ++DV++ ++     S+  +GAD++ + RE++I A+
Sbjct: 656  FIELPNAEEKLDIFKTLIRSNGTPIANDVDLAKIIEDDRSKNYSGADLAALVRESSILAL 715

Query: 997  EENL 1000
            + + 
Sbjct: 716  KRSF 719



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/253 (36%), Positives = 134/253 (52%), Gaps = 9/253 (3%)

Query: 751 EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
           +K+ +  RP    +     P +  + +GG  +V  QLME +  P  H E +   G  PP 
Sbjct: 159 DKSALTKRPKKKSKPDRTPPSITLKSLGGMDDVVAQLMELIGLPILHPEIYAATGIEPPR 218

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           G+L+ GPPGC KT +A A+A E  + F+ +  P + S   GESEK +R +F +A++ AP 
Sbjct: 219 GVLLHGPPGCGKTTIANALAGELNVPFINISAPSIVSGMSGESEKKLRDVFQEAKSIAPC 278

Query: 871 IIFFDEIDGLAAIRGKESDGVS--VSDRVMSQLLVELDGLHQRVN----VTVIAATNRPD 924
           +IFFDEID   AI  K   G    +  R+++QLL  +D L         V VI ATNRPD
Sbjct: 279 LIFFDEID---AITPKRDGGAQREMEKRIVAQLLTSMDELTMEHTDGKPVIVIGATNRPD 335

Query: 925 KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
            +D AL R GRFDR + +  PNE  R  I +     +     ++  +LA L+ G  GAD+
Sbjct: 336 ALDSALRRAGRFDREICLNVPNEISRLHILKKMASNLKIDGTIDFSKLAKLTPGFVGADL 395

Query: 985 SLICREAAISAIE 997
             +   A   AI+
Sbjct: 396 KALTTAAGTCAIK 408


>gi|320164481|gb|EFW41380.1| 26S proteasome regulatory complex [Capsaspora owczarzaki ATCC
           30864]
          Length = 1105

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 225/573 (39%), Positives = 318/573 (55%), Gaps = 56/573 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P +G+LLHGPPG GKT LA   A +  +    V+ PE+VS   GESE  + ++F  
Sbjct: 429 LGVEPPRGILLHGPPGCGKTLLANAIAGELELPFLKVSAPEIVSGMSGESEAKIRDLFAE 488

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG----VLVIAATN 554
           A+  AP +VFIDE+DAI P R+    E+ +R+VA LL  MD VC        V+VI A+N
Sbjct: 489 AAAQAPCIVFIDEIDAITPKRETAQREMERRIVAQLLTCMDDVCMEKTGNRPVIVIGASN 548

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPDS++PALRR GR DREI I               +P  A RL IL  L + ++ S  D
Sbjct: 549 RPDSLDPALRRAGRFDREIAI--------------GIPDDAARLRILQVLCAKLKVSG-D 593

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
            +   L+  T G+VGADLAAL  EAA++ + R         VLH  G   +      +M+
Sbjct: 594 LDFTELARRTPGYVGADLAALAKEAAVIAVNRIFS------VLH--GDSSDAPVAEKSMV 645

Query: 675 QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP-LRGTVSEIADNFHNG------- 726
            +     ++  S+ D   SA+P T     +  S++ P L    + + D+  +G       
Sbjct: 646 VEVPSENSV--SAPDSASSATPATPMTTNAAASANAPHLISLAASVGDHETHGKLELARA 703

Query: 727 ---VSD---SSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ 780
              +SD           E+   L +   DF +A  KV+PS+ RE    +P V W DVG  
Sbjct: 704 RSRISDRLREQRTPLTPEQLAHLSISFPDFVEALTKVQPSSKREGFATIPDVAWSDVGSL 763

Query: 781 REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAV 840
           ++V+ +L   +  P +    F   G + P G+L++GPPGC KTL+A+A+A E+G +F+++
Sbjct: 764 KDVREELEMTILKPIRQPHLFAAYGLKSPAGVLLYGPPGCGKTLLAKAIAHESGASFISI 823

Query: 841 KGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR------------GKES 888
           KGPEL +K+VGESE+AVR +F +AR++AP ++FFDE+D +   R            G   
Sbjct: 824 KGPELLNKYVGESERAVRQVFQRARSSAPCVVFFDELDSVCPRRGGGVDGMSGGGGGGGG 883

Query: 889 DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                S+RV++QLL E+DGL  R  V VIAATNRPD ID A+LRPGR D+L+YV  P   
Sbjct: 884 GESGASERVVNQLLTEMDGLDDRRKVFVIAATNRPDMIDAAMLRPGRLDKLMYVPLPTAD 943

Query: 949 DREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            R EI R  LR +P   DV++ +L  L   C G
Sbjct: 944 SRGEILRTALRSMPMHPDVDVSQLG-LDARCEG 975



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 6/235 (2%)

Query: 766 ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
           +++ P V + D+GG       + E +E+P  H E +  +G  PP GIL+ GPPGC KTL+
Sbjct: 391 MVDTPSVTYADLGGLESCLQDVRELIEYPLTHPEIYVHLGVEPPRGILLHGPPGCGKTLL 450

Query: 826 ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
           A A+A E  L FL V  PE+ S   GESE  +R LFA+A A AP I+F DEID +   R 
Sbjct: 451 ANAIAGELELPFLKVSAPEIVSGMSGESEAKIRDLFAEAAAQAPCIVFIDEIDAITPKR- 509

Query: 886 KESDGVSVSDRVMSQLLVELDG--LHQRVN--VTVIAATNRPDKIDPALLRPGRFDRLLY 941
            E+    +  R+++QLL  +D   + +  N  V VI A+NRPD +DPAL R GRFDR + 
Sbjct: 510 -ETAQREMERRIVAQLLTCMDDVCMEKTGNRPVIVIGASNRPDSLDPALRRAGRFDREIA 568

Query: 942 VGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           +G P++  R  I ++   K+  S D++  ELA  + G  GAD++ + +EAA+ A+
Sbjct: 569 IGIPDDAARLRILQVLCAKLKVSGDLDFTELARRTPGYVGADLAALAKEAAVIAV 623



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 143/303 (47%), Gaps = 49/303 (16%)

Query: 344 ADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQ 403
           +D   E+  P   E + H S +F    E    + P       S REG        F  + 
Sbjct: 708 SDRLREQRTPLTPEQLAHLSISFPDFVEALTKVQP------SSKREG--------FATIP 753

Query: 404 ATVEQDISKLGGLSKE--YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
                D+  L  + +E    ILK I          ++ GL+   GVLL+GPPG GKT LA
Sbjct: 754 DVAWSDVGSLKDVREELEMTILKPI----RQPHLFAAYGLKSPAGVLLYGPPGCGKTLLA 809

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
           +  AH+SG +  ++ GPE++++  GESE+A+ +VF  A  SAP VVF DELD++ P R  
Sbjct: 810 KAIAHESGASFISIKGPELLNKYVGESERAVRQVFQRARSSAPCVVFFDELDSVCPRRGG 869

Query: 522 GGEEL--------------SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPG 567
           G + +              S+R+V  LL  MDG+     V VIAATNRPD I+ A+ RPG
Sbjct: 870 GVDGMSGGGGGGGGGESGASERVVNQLLTEMDGLDDRRKVFVIAATNRPDMIDAAMLRPG 929

Query: 568 RLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME-HSLLDSEVEYLSMATHG 626
           RLD+ + + +              P+   R EIL   L  M  H  +D     L     G
Sbjct: 930 RLDKLMYVPL--------------PTADSRGEILRTALRSMPMHPDVDVSQLGLDARCEG 975

Query: 627 FVG 629
           F G
Sbjct: 976 FSG 978


>gi|355708467|gb|AES03277.1| nuclear VCP-like protein [Mustela putorius furo]
          Length = 805

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 231/578 (39%), Positives = 322/578 (55%), Gaps = 72/578 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG  P +GVLLHGPPG GKT LA   A +  + +  V   E+VS   GESEQ L E+F+ 
Sbjct: 267  LGATPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQ 326

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV---CRTDGVLVIAATNR 555
            A  +AP V+FIDE+DAI P R+   +++ +R+VA LL  MD +     T  VLVI ATNR
Sbjct: 327  AVSNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNTMATTARVLVIGATNR 386

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PD+++PALRR GR DREI +               +P  A R  IL  L   +    L  
Sbjct: 387  PDALDPALRRAGRFDREICL--------------GIPDEASRERILRTLCRKLR---LPE 429

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR----YSKIQT--SSDVLHSTGTLFEFE 667
               +  +A  T GFVGADL ALC EAA+  + R    + + QT      +   G   E+ 
Sbjct: 430  SFPFCHLAHLTPGFVGADLMALCREAAMGAVSRVLMAWQEQQTMDPKTAVSPPGRGREYP 489

Query: 668  GHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGV 727
              ++   +   CS  + +  +  L+            LL S  PL               
Sbjct: 490  MGAEPTPEPPACS--VQDELKWLLE------------LLRSQDPLS-------------- 521

Query: 728  SDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQL 787
                      E+   L +E  DF  A   V+PSA RE  + VP V W D+G   +++ +L
Sbjct: 522  ---------EEQLQGLCIEWDDFTAALASVQPSAKREGFVTVPNVTWADIGALEDIREEL 572

Query: 788  MEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFS 847
              A+  P ++ + F+ +G   P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL +
Sbjct: 573  TMAILAPVRNPDQFRALGLETPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLN 632

Query: 848  KWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDG 907
             +VGESE+AVR +F +AR++AP +IFFDE+D L   R     G SV  RV++QLL E+DG
Sbjct: 633  MYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDG 690

Query: 908  LHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCS 964
            L  R  V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I +   +   + P  
Sbjct: 691  LEARQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLG 750

Query: 965  SDVNIRELAC-LSEGC-TGADISLICREAAISAIEENL 1000
            +DV++  LA  L   C +GAD+S + REA+I A+ + +
Sbjct: 751  ADVSLEALAADLRCDCYSGADLSALVREASICALRQEM 788



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/270 (40%), Positives = 151/270 (55%), Gaps = 16/270 (5%)

Query: 736 MSEKGCALKLEL--VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLME 789
           +  KG   K +L   D E   +  R +  +E+ L+V KVK+EDVGG     +EV   L+ 
Sbjct: 198 LKRKGSKRKKDLQEADGEIEAVLKRKAKAKELELQVSKVKFEDVGGNDTTLKEVCKMLIH 257

Query: 790 AVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKW 849
                 +H E +  +G  PP G+L+ GPPGC KTL+A A+A E  L  L V   E+ S  
Sbjct: 258 -----MRHPEVYCHLGATPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGV 312

Query: 850 VGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLH 909
            GESE+ +R LF +A +NAP ++F DEID +   R  E     +  R+++QLL  +D L+
Sbjct: 313 SGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLN 370

Query: 910 QRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD 966
                  V VI ATNRPD +DPAL R GRFDR + +G P+E  RE I R   RK+     
Sbjct: 371 TMATTARVLVIGATNRPDALDPALRRAGRFDREICLGIPDEASRERILRTLCRKLRLPES 430

Query: 967 VNIRELACLSEGCTGADISLICREAAISAI 996
                LA L+ G  GAD+  +CREAA+ A+
Sbjct: 431 FPFCHLAHLTPGFVGADLMALCREAAMGAV 460



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 140/259 (54%), Gaps = 21/259 (8%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    GVLL G
Sbjct: 544 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFRALGLETPAGVLLAG 601

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 602 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDE 661

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 662 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFILAATNRPDIIDPAILRPGRLDK 721

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGF 627
            + +               +P PA RL IL  +        L ++V   ++A       +
Sbjct: 722 TLFV--------------GLPPPADRLAILKTITKNGTRPPLGADVSLEALAADLRCDCY 767

Query: 628 VGADLAALCNEAALVCLRR 646
            GADL+AL  EA++  LR+
Sbjct: 768 SGADLSALVREASICALRQ 786


>gi|207343269|gb|EDZ70783.1| YLL034Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 693

 Score =  367 bits (943), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 241/677 (35%), Positives = 370/677 (54%), Gaps = 89/677 (13%)

Query: 385  KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
            K  +EGT    + + +  ++     +  LGG+    A L ++I +         S G+ P
Sbjct: 35   KRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEP 94

Query: 444  TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
             +GVLLHGPPG GKTS+A   A +  V   +++ P VVS   GESE+ + ++FD A   A
Sbjct: 95   PRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLA 154

Query: 504  PAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPD 557
            P +VF DE+DAI P R DGG   E+ +R+VA LL  MD +   +T+G  V++I ATNRPD
Sbjct: 155  PCLVFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPD 213

Query: 558  SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            S++ ALRR GR DREI ++              VP+   RL IL  +   ++   +D  +
Sbjct: 214  SLDAALRRAGRFDREICLN--------------VPNEVSRLHILKKMSDNLK---IDGAI 256

Query: 618  EYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
            ++  +A  T GFVGADL AL   A    ++R    QT +++  +  T    +   D M  
Sbjct: 257  DFAKLAKLTPGFVGADLKALVTAAGTCAIKRI--FQTYANIKSTPTT--ATDSSEDNM-- 310

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
            + D + N  ESS   L + +     LP S+          V +   N+   +S       
Sbjct: 311  EIDETANGDESS---LKNTANMIDPLPLSV----------VQQFIRNYPEPLS------- 350

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
              E+   L ++  DF KA   ++P+A RE    VP V W +VG  + V+ +L  A+  P 
Sbjct: 351  -GEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPI 409

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            K  E ++++G   P G+L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+
Sbjct: 410  KRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESER 469

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            ++R +F +ARA+ P +IFFDE+D L   R  ++     S RV++ LL ELDGL+ R  + 
Sbjct: 470  SIRQVFTRARASVPCVIFFDELDALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIF 527

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELA 973
            VI ATNRPD IDPA+LRPGR D+ L++  PN  ++ +I +   +    P SSDV+  E+ 
Sbjct: 528  VIGATNRPDMIDPAMLRPGRLDKTLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEI- 586

Query: 974  CLSEGC---TGADISLICREAAI--------------SAIEENLDASR------------ 1004
              +E C   +GAD++ + RE+++              S ++ +LD               
Sbjct: 587  IRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEI 646

Query: 1005 -ITMQHLKTAIRHVQPS 1020
             +TM   ++A+R ++PS
Sbjct: 647  IVTMSDFRSALRKIKPS 663


>gi|444320131|ref|XP_004180722.1| hypothetical protein TBLA_0E01450 [Tetrapisispora blattae CBS 6284]
 gi|387513765|emb|CCH61203.1| hypothetical protein TBLA_0E01450 [Tetrapisispora blattae CBS 6284]
          Length = 861

 Score =  367 bits (943), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 245/691 (35%), Positives = 371/691 (53%), Gaps = 91/691 (13%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGG+    A L ++I    +   +  S G+ P +GVLLHGPPG GKTS+A   A + 
Sbjct: 206  LSSLGGMDDVIAQLMELIGLPILHPEIYLSTGVEPPRGVLLHGPPGCGKTSIANALAGEL 265

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG--EEL 526
             V   +V+ P VVS   GESE+ + E+F+ A   AP ++F DE+DAI P R DGG   E+
Sbjct: 266  QVPFISVSAPSVVSGMSGESEKKVRELFEEAKSLAPCLMFFDEIDAITPKR-DGGAQREM 324

Query: 527  SQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
             +R+VA LL  MD +   +TDG  V+VI ATNRPD+++ ALRR GR DREI ++      
Sbjct: 325  ERRIVAQLLTSMDELSMEKTDGKPVIVIGATNRPDALDAALRRAGRFDREICLN------ 378

Query: 583  LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAA 640
                    VPS   RL IL  + + +    +D  +++  +A  T GFVGADL AL   A 
Sbjct: 379  --------VPSEVSRLHILKKMSNNLR---IDGHIDFSKLAKLTPGFVGADLKALVTAAG 427

Query: 641  LVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ-DSDCSRNITESSRDCLDSASPCTS 699
               ++R     +S D              +D+M++ D+D   N   S+    D   P   
Sbjct: 428  TCAIKRIFSTFSSLD-------------RTDSMMEVDADGIDNPPNST----DEDEPNLK 470

Query: 700  DLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRP 759
            +  T+ +   LPL      I  NF     +       +++   L ++  DF KA   ++P
Sbjct: 471  N--TANIIDPLPL-----SIIQNFIQKYPEP----LNNDQLLLLSIKYEDFLKALPTIQP 519

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            +A RE    VP V WE +G   +++ +L  A+  P K  E ++++G   P G+L++GPPG
Sbjct: 520  TAKREGFATVPDVTWESIGALDKIRAELNLAIVQPVKRPELYEKVGISAPAGVLLWGPPG 579

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
            C KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+A+R +F++ARA+ P +IFFDE+D 
Sbjct: 580  CGKTLLAKAVANESRANFISIKGPELLNKYVGESERAIRQVFSRARASVPCVIFFDELDA 639

Query: 880  LAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            L   R  ++     S RV++ LL ELDGL+ R  + VI ATNRPD IDPA+LRPGR D+ 
Sbjct: 640  LVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKT 697

Query: 940  LYVGPPNETDREEIFR--IHLRKIPCSSDVNIRELACLSEGC---TGADISLICREAAIS 994
            L++  PN  ++ +I +    +   P +SDV++  +    E C   +GADI+ + RE+++ 
Sbjct: 698  LFIELPNFEEKLDILKTITKVNGTPLASDVDL-SIIINDERCRNYSGADIASLVRESSVL 756

Query: 995  AIEE--------------NLDASR-------------ITMQHLKTAIRHVQPSEIHSYKE 1027
            A++               NLD                +TM   K A+  ++PS     + 
Sbjct: 757  ALKRSFFKVDKLQSVANNNLDKEFEDLSVGVPKDEIIVTMDDFKGALMKIKPSVSDKDRN 816

Query: 1028 LSAKFQRLVHSNAEADESGYQLRPSKSIGSN 1058
               +  + +  N   D  G + +   SI  N
Sbjct: 817  KYDRLNKKMGWNDNVDMQGDEKKEETSIIDN 847


>gi|156840873|ref|XP_001643814.1| hypothetical protein Kpol_1044p15 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114440|gb|EDO15956.1| hypothetical protein Kpol_1044p15 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 839

 Score =  367 bits (943), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 229/606 (37%), Positives = 343/606 (56%), Gaps = 65/606 (10%)

Query: 409 DISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           D+  LGG+    A L ++I    +   +  S G+ P +GVLLHGPPG GKTS+A   A +
Sbjct: 208 DLKSLGGMDDVIAQLMELIGLPILHPEIYQSTGVEPPRGVLLHGPPGCGKTSIANALAGE 267

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG--EE 525
             V   +++ P VVS   GESE+ + ++FD A   AP ++F DE+DAI P R DGG   E
Sbjct: 268 LQVPFISISAPSVVSGMSGESEKKIRDLFDEAKAIAPCLMFFDEIDAITPKR-DGGAQRE 326

Query: 526 LSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
           + +R+VA LL  MD +   +T G  V+VI ATNRPDS++ ALRR GR DREI ++     
Sbjct: 327 MERRIVAQLLTSMDELSMEKTGGKPVIVIGATNRPDSLDAALRRAGRFDREICLN----- 381

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEA 639
                    VP+   RL IL  +   ++   +D E+++  +A  T GFVGADL AL   A
Sbjct: 382 ---------VPNEVSRLHILKKMSENLK---IDGEIDFAQLAKLTPGFVGADLKALSTAA 429

Query: 640 ALVCLRRYSKIQTSSDVLHSTGTLF-EFEGHSDTMLQDSDCSRNITESSRD--CLDSASP 696
               ++R         + H+  TL  E    SD M  DS  +    +   D   L + + 
Sbjct: 430 GTCAIKR---------IFHNYATLKPEQLPLSDKMEIDSQSNSIDIKDEYDEPKLKNTAD 480

Query: 697 CTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMK 756
               LP S+          + +  DNF   ++         E+   L ++  DF KA   
Sbjct: 481 IIDPLPLSI----------IQKFIDNFPEPLT--------GEQLSNLSIKYEDFLKALPT 522

Query: 757 VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
           ++P+A RE    VP V W +VG   + + +L  A+  P K  E ++++G   P G+L++G
Sbjct: 523 IQPTAKREGFATVPDVTWANVGALDKTRVELNMAIVQPIKRPELYEKVGISAPAGVLLWG 582

Query: 817 PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
           PPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+++R +F +ARA+ P +IFFDE
Sbjct: 583 PPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDE 642

Query: 877 IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
           +D L   R  ++     S RV++ LL ELDGL+ R  + VI ATNRPD IDPA+LRPGR 
Sbjct: 643 LDALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRL 700

Query: 937 DRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELACLSEGC---TGADISLICREA 991
           D+ L++  PNE ++ +I +   R    P + DV ++ +    E C   +GAD++ + RE+
Sbjct: 701 DKTLFIELPNEDEKLDIIKTLTRSNGTPLADDVELQTIIS-DERCRNFSGADLAALVRES 759

Query: 992 AISAIE 997
           ++ A++
Sbjct: 760 SVLALK 765



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 129/234 (55%), Gaps = 9/234 (3%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P    + +GG  +V  QLME +  P  H E ++  G  PP G+L+ GPPGC KT +A A+
Sbjct: 205 PSSDLKSLGGMDDVIAQLMELIGLPILHPEIYQSTGVEPPRGVLLHGPPGCGKTSIANAL 264

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  + F+++  P + S   GESEK +R LF +A+A AP ++FFDEID   AI  K   
Sbjct: 265 AGELQVPFISISAPSVVSGMSGESEKKIRDLFDEAKAIAPCLMFFDEID---AITPKRDG 321

Query: 890 GVS--VSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           G    +  R+++QLL  +D L         V VI ATNRPD +D AL R GRFDR + + 
Sbjct: 322 GAQREMERRIVAQLLTSMDELSMEKTGGKPVIVIGATNRPDSLDAALRRAGRFDREICLN 381

Query: 944 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            PNE  R  I +     +    +++  +LA L+ G  GAD+  +   A   AI+
Sbjct: 382 VPNEVSRLHILKKMSENLKIDGEIDFAQLAKLTPGFVGADLKALSTAAGTCAIK 435


>gi|336371024|gb|EGN99364.1| hypothetical protein SERLA73DRAFT_108832 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336383777|gb|EGO24926.1| hypothetical protein SERLADRAFT_370152 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 754

 Score =  367 bits (941), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 227/597 (38%), Positives = 337/597 (56%), Gaps = 59/597 (9%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G++P +GVLLHGPPG GKT LA   A + GV   +++ P VVS   GESE+ L + FD A
Sbjct: 144  GVQPPRGVLLHGPPGCGKTLLANAIAGELGVPFISISAPSVVSGMSGESEKTLRDTFDEA 203

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
             ++AP ++FIDE+DAI P R+    E+ +R+VA  L  MD +   +TD   V+VI ATNR
Sbjct: 204  KRAAPCLLFIDEIDAITPKRESAQREMERRIVAQFLTCMDDISWEKTDNKPVIVIGATNR 263

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++ ALRR GR D EI +               VP    R +IL  L + +    L+ 
Sbjct: 264  PDSLDAALRRAGRFDHEISM--------------GVPDEEGRAKILRVLSAKLR---LEG 306

Query: 616  EVEY--LSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDT 672
            +  +  L+ AT G+VGADL+AL   A ++ ++R + ++   + +L  T      +G++D 
Sbjct: 307  DFNFAVLAKATPGYVGADLSALTGAAGIIAVKRIFKQLSDGTLILPETPE----KGNADV 362

Query: 673  MLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
            ++        I +   + ++   P  S  P   LS   P  G  ++ + +       +  
Sbjct: 363  LM--------IIDPPLEGIEQ--PLESP-PNQNLS---PFAGLAAQFSSSSIAHFLSAHP 408

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
                  +   L +   DF  A  +V+PS+ RE    VP V W D+G    ++ +L  A+ 
Sbjct: 409  DPLTEAQLAPLCITSADFTLALKQVQPSSKREGFATVPDVTWADIGALHGIRDELHMAIV 468

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P +  E F  +G     G+L++GPPGC KTL+A+AVA+E+  NF++VKGPEL +K+VGE
Sbjct: 469  QPIRRPELFSAVGIEAACGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGE 528

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQR 911
            SE+AVR +F++ARA++P +IFFDE+D L   R    D +S S  RV++ LL ELDGL  R
Sbjct: 529  SERAVRQVFSRARASSPCVIFFDELDALVPRR---DDNLSESSARVVNTLLTELDGLDAR 585

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRE 971
             +V VIAATNRPD IDPA++RPGR D+LLYV  P+  +R EI R   RK+P  ++   RE
Sbjct: 586  KSVYVIAATNRPDMIDPAMVRPGRLDKLLYVDLPSPEERAEIIRTMTRKLPLGAEDAARE 645

Query: 972  LAC---------LSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            L             +G +GAD++ + REA + A+   + A    +  L+ +I    P
Sbjct: 646  LVLHRVEEIVKERCDGYSGADLASLVREAGVVALRRTMGA----LDQLEDSIERKAP 698



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/258 (40%), Positives = 142/258 (55%), Gaps = 28/258 (10%)

Query: 399 FQNVQATVEQDISKLGGLSKE--YAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           F  V      DI  L G+  E   AI++ I          S++G+    GVLL GPPG G
Sbjct: 442 FATVPDVTWADIGALHGIRDELHMAIVQPI----RRPELFSAVGIEAACGVLLWGPPGCG 497

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A++S  N  +V GPE++++  GESE+A+ +VF  A  S+P V+F DELDA+ 
Sbjct: 498 KTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFSRARASSPCVIFFDELDALV 557

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R D   E S R+V TLL  +DG+     V VIAATNRPD I+PA+ RPGRLD+ + +D
Sbjct: 558 PRRDDNLSESSARVVNTLLTELDGLDARKSVYVIAATNRPDMIDPAMVRPGRLDKLLYVD 617

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLS----GMEHS----LLDSEVEYLSMATHGFV 628
           +              PSP +R EI+  +      G E +    +L    E +     G+ 
Sbjct: 618 L--------------PSPEERAEIIRTMTRKLPLGAEDAARELVLHRVEEIVKERCDGYS 663

Query: 629 GADLAALCNEAALVCLRR 646
           GADLA+L  EA +V LRR
Sbjct: 664 GADLASLVREAGVVALRR 681



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 128/232 (55%), Gaps = 6/232 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG      +++E V  P  H E +   G +PP G+L+ GPPGC KTL+A A+
Sbjct: 109 PTTRLADLGGVEACVEKMLELVAMPLCHPEIYLHTGVQPPRGVLLHGPPGCGKTLLANAI 168

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ F+++  P + S   GESEK +R  F +A+  AP ++F DEID +   R  ES 
Sbjct: 169 AGELGVPFISISAPSVVSGMSGESEKTLRDTFDEAKRAAPCLLFIDEIDAITPKR--ESA 226

Query: 890 GVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++Q L  +D +         V VI ATNRPD +D AL R GRFD  + +G P
Sbjct: 227 QREMERRIVAQFLTCMDDISWEKTDNKPVIVIGATNRPDSLDAALRRAGRFDHEISMGVP 286

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           +E  R +I R+   K+    D N   LA  + G  GAD+S +   A I A++
Sbjct: 287 DEEGRAKILRVLSAKLRLEGDFNFAVLAKATPGYVGADLSALTGAAGIIAVK 338


>gi|348677335|gb|EGZ17152.1| hypothetical protein PHYSODRAFT_499974 [Phytophthora sojae]
          Length = 886

 Score =  366 bits (939), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 254/677 (37%), Positives = 367/677 (54%), Gaps = 95/677 (14%)

Query: 412  KLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHD--- 467
            K+GG+  E A L+++I+       L S LG+   KGVLL GPPG GKT L R   H+   
Sbjct: 215  KVGGMEDERAALRELILLPVAHPRLRSDLGVEFPKGVLLCGPPGVGKTLLVRSVVHECRQ 274

Query: 468  ----SG----VNLFTVNGPEVVSQNYGESEQALHEVFDSA------SQSAPAVVFIDELD 513
                SG    +NL  +NG E+++   G++EQAL   F++A      ++ A +V+FIDELD
Sbjct: 275  VQDASGATLDLNLQVINGSEIMTSGRGDAEQALRSTFETAVVHARSARHAASVIFIDELD 334

Query: 514  AIAPARKDGGEELSQ---RMVATLLNLMDGV---CRTDGVLVIAATNRPDSIEPALRRPG 567
            A+ P R+  G   S    R+VA LL L+DGV      + V+V+AATN P+SI+PALRRPG
Sbjct: 335  ALCPKREAAGGGASSAHSRIVAQLLTLLDGVEGGLSRENVVVVAATNLPNSIDPALRRPG 394

Query: 568  RLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH-----SLLDSE------ 616
            R DREI +              A P+ A R +I    LS   +     SL D+E      
Sbjct: 395  RFDREIYV--------------APPNTALRKKIFKVHLSRTPYALSSDSLDDAEARRDVF 440

Query: 617  VEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQD 676
            ++ L+    G+VGAD+AALC EAA+V   R     +    L      ++      + LQ+
Sbjct: 441  LDRLAAKAVGYVGADIAALCREAAMVASTRQLVALSRDRELEQWWADWKRRVEPLSALQN 500

Query: 677  SDCSRNITESSRDCLDSASPCTSDLPTSLL--------------SSSLP---------LR 713
            +  +     + R     A+P T+ +P   L              S+SLP         L 
Sbjct: 501  ASSTLGAVVAGRAW--HANP-TAIIPLWFLAKQSNQHDIDKTADSTSLPQSDREYFGYLL 557

Query: 714  GTVSEIADNF---HNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREV---IL 767
            G  SE    F   H+G  D        +K  A ++ + DFE+A   V PSA+R       
Sbjct: 558  G--SEGKRTFAPAHHGERDQ-------KKIEAFEVTMEDFEQAMQTVVPSALRGASGFTK 608

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            +  +  W+ +GGQ E K  L +A+EWP K  + F R+G +PP G+L++GPPGCSK+ + R
Sbjct: 609  DFERQGWDSIGGQAETKLALQQALEWPIKFPQTFARLGVKPPRGVLLYGPPGCSKSSIVR 668

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR--- 884
            A A  +G  FL++   ++FS + G++E AVR +F  ARA  P+IIFFDEID + A R   
Sbjct: 669  AAAHSSGATFLSLSAAQVFSPFFGDAEAAVRQVFRDARAALPAIIFFDEIDVMVAKREFD 728

Query: 885  --GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
              G    G S + RV+S +L E+DG+       VI ATNRPD ID AL+RPGRFDR+ +V
Sbjct: 729  GSGGGEGGSSTAMRVLSTMLNEMDGVESAEGPLVIGATNRPDCIDAALMRPGRFDRIQFV 788

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              P E DR +I RIH R +   +DV++ ELA  +   +GA++  +CREAA+ A+ E+L+A
Sbjct: 789  DLPVEPDRVDILRIHSRPMQLHNDVDLLELAKRTPFFSGAELENLCREAALLALRESLEA 848

Query: 1003 SRITMQHLKTAIRHVQP 1019
             ++  +H + A+R + P
Sbjct: 849  EKVCKRHFEEALRGITP 865


>gi|221057948|ref|XP_002261482.1| cell division cycle protein 48 homologue [Plasmodium knowlesi
           strain H]
 gi|194247487|emb|CAQ40887.1| cell division cycle protein 48 homologue,putative [Plasmodium
           knowlesi strain H]
          Length = 822

 Score =  366 bits (939), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 226/581 (38%), Positives = 319/581 (54%), Gaps = 98/581 (16%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A ++++I +         +LG++P +GVLL+GPPG+GKT +AR  A+++G  
Sbjct: 209 IGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAF 268

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPEV+S+  GE+E  L   F+ A +++PA++FIDE+D+IAP R+    E+ +R+V
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVV 328

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VIAATNR +SI+PALRR GR DREI+I               V
Sbjct: 329 SQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDI--------------GV 374

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           P    R EIL      M+ S  D ++E L+ +THGFVGADLA LC EAAL C+R      
Sbjct: 375 PDDNGRFEILRIHTKNMKLS-PDVKLEELASSTHGFVGADLAQLCTEAALTCIRE----- 428

Query: 652 TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
              DV+                L+D    + + ES   C+      T D     L +  P
Sbjct: 429 -KMDVID---------------LEDEIIDKEVLESM--CV------TQDHFNMALGTCNP 464

Query: 712 --LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
             LR TV E+     N   D  GG+   +                     + +RE+IL  
Sbjct: 465 SSLRETVVEVP----NVKWDDIGGLDEVK---------------------NTLREMIL-- 497

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
                                ++ P K    F++ G  P  G+L +GPPGC KTL+A+AV
Sbjct: 498 -------------------YPIDHPDK----FEKFGMSPSRGVLFYGPPGCGKTLLAKAV 534

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-S 888
           ASE   NF+++KGPEL + W GESE  VR +F KARA AP ++FFDE+D +   RG    
Sbjct: 535 ASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSTLG 594

Query: 889 DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
           DG    DRVM+QLL E+DG+  + N+  I ATNRP+ +D ALLRPGR D+L+Y+  P+  
Sbjct: 595 DGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLA 654

Query: 949 DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            R  I    LRK P + +V I  LA  + G +GAD++ +C+
Sbjct: 655 ARISILSAILRKCPVADNVPIDFLAQKTAGFSGADLAELCQ 695



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 106/232 (45%), Positives = 150/232 (64%), Gaps = 2/232 (0%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++D+GG ++   Q+ E +E P +H   FK +G +PP G+L++GPPG  KT +ARAVA
Sbjct: 203  EIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVA 262

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GE+E  +R  F +A  N+P+IIF DEID +A  R K +  
Sbjct: 263  NETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNG- 321

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV+SQLL  +DG+  R  V VIAATNR + IDPAL R GRFDR + +G P++  R
Sbjct: 322  -EVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGR 380

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
             EI RIH + +  S DV + ELA  + G  GAD++ +C EAA++ I E +D 
Sbjct: 381  FEILRIHTKNMKLSPDVKLEELASSTHGFVGADLAQLCTEAALTCIREKMDV 432


>gi|389584629|dbj|GAB67361.1| cell division cycle protein 48 homologue [Plasmodium cynomolgi
           strain B]
          Length = 822

 Score =  366 bits (939), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 226/581 (38%), Positives = 319/581 (54%), Gaps = 98/581 (16%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A ++++I +         +LG++P +GVLL+GPPG+GKT +AR  A+++G  
Sbjct: 209 IGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAF 268

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPEV+S+  GE+E  L   F+ A +++PA++FIDE+D+IAP R+    E+ +R+V
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVV 328

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VIAATNR +SI+PALRR GR DREI+I               V
Sbjct: 329 SQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDI--------------GV 374

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           P    R EIL      M+ S  D ++E L+ +THGFVGADLA LC EAAL C+R      
Sbjct: 375 PDDNGRFEILRIHTKNMKLS-PDVKLEELASSTHGFVGADLAQLCTEAALTCIRE----- 428

Query: 652 TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
              DV+                L+D    + + ES   C+      T D     L +  P
Sbjct: 429 -KMDVID---------------LEDEIIDKEVLESM--CV------TQDHFNMALGTCNP 464

Query: 712 --LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
             LR TV E+     N   D  GG+   +                     + +RE+IL  
Sbjct: 465 SSLRETVVEVP----NVKWDDIGGLDEVK---------------------NTLREMIL-- 497

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
                                ++ P K    F++ G  P  G+L +GPPGC KTL+A+AV
Sbjct: 498 -------------------YPIDHPDK----FEKFGMSPSRGVLFYGPPGCGKTLLAKAV 534

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-S 888
           ASE   NF+++KGPEL + W GESE  VR +F KARA AP ++FFDE+D +   RG    
Sbjct: 535 ASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSTLG 594

Query: 889 DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
           DG    DRVM+QLL E+DG+  + N+  I ATNRP+ +D ALLRPGR D+L+Y+  P+  
Sbjct: 595 DGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLA 654

Query: 949 DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            R  I    LRK P + +V I  LA  + G +GAD++ +C+
Sbjct: 655 ARISILSAILRKCPVADNVPIDFLAQKTAGFSGADLAELCQ 695



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 107/232 (46%), Positives = 152/232 (65%), Gaps = 2/232 (0%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++D+GG ++   Q+ E +E P +H   FK +G +PP G+L++GPPG  KT +ARAVA
Sbjct: 203  EIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVA 262

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GE+E  +R  F +A  N+P+IIF DEID +A  R K ++G
Sbjct: 263  NETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREK-TNG 321

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV+SQLL  +DG+  R  V VIAATNR + IDPAL R GRFDR + +G P++  R
Sbjct: 322  -EVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGR 380

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
             EI RIH + +  S DV + ELA  + G  GAD++ +C EAA++ I E +D 
Sbjct: 381  FEILRIHTKNMKLSPDVKLEELASSTHGFVGADLAQLCTEAALTCIREKMDV 432


>gi|401624756|gb|EJS42804.1| rix7p [Saccharomyces arboricola H-6]
          Length = 837

 Score =  365 bits (938), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 241/693 (34%), Positives = 371/693 (53%), Gaps = 93/693 (13%)

Query: 385  KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
            K  +EGT    + + +  ++     +  LGG+    A L ++I +         S G+ P
Sbjct: 179  KRSKEGTCKVKRQKVKEDRSPPNSSLKTLGGMDDVTAQLMELIGLPILHPEIFLSTGVEP 238

Query: 444  TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
             +GVLLHGPPG GKTS+A   A +  V   +++ P VVS   GESE+ + ++FD A   A
Sbjct: 239  PRGVLLHGPPGCGKTSIANALAGELKVPFISISAPSVVSGMSGESEKKIRDLFDEAKSLA 298

Query: 504  PAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPD 557
            P +VF DE+DAI P R DGG   E+ +R+VA LL  MD +    T+G  V++I ATNRPD
Sbjct: 299  PCLVFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELTMENTNGKPVIIIGATNRPD 357

Query: 558  SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            S++ ALRR GR DREI ++              VP+   RL IL  +   ++   +D  +
Sbjct: 358  SLDSALRRAGRFDREICLN--------------VPNEVSRLHILKKMSDDLK---IDGTI 400

Query: 618  EYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
            ++  +A  T GFVGADL AL   A    ++R    QT +++  S  T  +     D M  
Sbjct: 401  DFAKLAKLTPGFVGADLKALVTAAGTCAIKRI--FQTYANIESSPSTTAD--NSEDQM-- 454

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
            + D + N  ESS   L + +     LP S+          V +   N+   +++    + 
Sbjct: 455  EIDEAANEDESS---LKNTANMIDPLPLSV----------VQQFIHNYPEPLTNDQLSL- 500

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
                   L ++  DF KA   ++P+A RE    VP V W +VG  + V+ +L  A+  P 
Sbjct: 501  -------LSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRIELNMAIVQPI 553

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            K  E ++++G   P G+L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+
Sbjct: 554  KRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESER 613

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            ++R +F +ARA+ P +IFFDE+D L   R  ++     S RV++ LL ELDGL+ R  + 
Sbjct: 614  SIRQVFTRARASVPCVIFFDELDALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIF 671

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELA 973
            VI ATNRPD IDPA+LRPGR D+ L++  PN  ++ +I +   +    P S DV+  ++ 
Sbjct: 672  VIGATNRPDMIDPAMLRPGRLDKTLFIELPNREEKLDIIKTLAKSHGTPLSGDVDFEKII 731

Query: 974  CLSEGC---TGADISLICREAAISAIEENLDASR-------------------------- 1004
              +E C   +GAD++ + RE+++ A++ N   S                           
Sbjct: 732  T-NEKCKNFSGADLAALVRESSVLALKRNFFQSEEIQSVLDNDLDKEFEDLSVGMSNEEI 790

Query: 1005 -ITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
             +TM   + A+R ++PS    +   Y  L+ K 
Sbjct: 791  IVTMSDFQNALRKIKPSVSDKDRQKYDRLNKKM 823


>gi|255714923|ref|XP_002553743.1| KLTH0E06006p [Lachancea thermotolerans]
 gi|238935125|emb|CAR23306.1| KLTH0E06006p [Lachancea thermotolerans CBS 6340]
          Length = 819

 Score =  365 bits (937), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 232/649 (35%), Positives = 356/649 (54%), Gaps = 99/649 (15%)

Query: 436  LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             +S G+ P +GVLLHGPPG GKTS+A   A +  V   +++ P VVS   GESE+ + ++
Sbjct: 228  FASTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDL 287

Query: 496  FDSASQSAPAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG--VLV 549
            F+ A   AP +VF DE+DAI P R DGG   E+ +R+VA LL  MD +   +T G  V++
Sbjct: 288  FEEAKSLAPCLVFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELSFEKTGGKPVII 346

Query: 550  IAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME 609
            I ATNRPDS++ ALRR GR DREI ++              VP+   RL IL  + S ++
Sbjct: 347  IGATNRPDSLDAALRRAGRFDREICLN--------------VPNEISRLHILKKMSSTLK 392

Query: 610  HSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFE 667
               +D  +++L +A  T GFVGADL AL   A    ++R         +  S  +L    
Sbjct: 393  ---IDGSIDFLKLAKLTPGFVGADLKALSTAAGTCAIKR---------IFQSYASL---- 436

Query: 668  GHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGV 727
              +   + D   + + ++  ++ ++   P             LPL  TV +   +F   +
Sbjct: 437  APTSMEVDDETLTSDGSQEPKNTVNMIDP-------------LPL-STVQKFIQSFPEPL 482

Query: 728  SDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQL 787
            ++        E+  +L +   DF KA   ++P+A RE    VP V W ++G    V+ +L
Sbjct: 483  TE--------EQLASLSIRYEDFLKALPTIQPTAKREGFATVPDVSWANIGALNRVRIEL 534

Query: 788  MEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFS 847
              A+  P K  E ++++G   P G+L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +
Sbjct: 535  NMAIVQPIKRPELYEKVGISAPAGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLN 594

Query: 848  KWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDG 907
            K+VGESE+A+R +F++ARA+ P +IFFDE+D L   R  ++     S RV++ LL ELDG
Sbjct: 595  KYVGESERAIRQVFSRARASVPCVIFFDELDALVPRR--DASLSESSSRVVNTLLTELDG 652

Query: 908  LHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSS 965
            L+ R  + VI ATNRPD ID A+LRPGR D+ L++  PN  ++ +I +   R    P SS
Sbjct: 653  LNDRRGIFVIGATNRPDMIDAAMLRPGRLDKTLFIELPNFEEKLDIIKTLARTNGTPLSS 712

Query: 966  DVN----IRELACLSEGCTGADISLICREAAISAI--------------EENLDASR--- 1004
            DV+    IR+ +C     +GAD++ + RE+++ A+              E NL+      
Sbjct: 713  DVDFEAIIRDESC--RNFSGADLAALIRESSVLALKRSFFRTEEVHSITENNLEKEFGEL 770

Query: 1005 --------ITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADES 1045
                    +TMQ    A++ V+PS     ++   K++RL       DE+
Sbjct: 771  NTSSEDVIVTMQDFSNALKKVKPSVSDKDRQ---KYERLNKKMGWVDEA 816


>gi|392564744|gb|EIW57922.1| AAA-domain-containing protein [Trametes versicolor FP-101664 SS1]
          Length = 707

 Score =  365 bits (937), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 240/635 (37%), Positives = 342/635 (53%), Gaps = 77/635 (12%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G++P +GVLLHGPPG GKT LA   A + GV    ++ P VVS   GESE+ L + FD A
Sbjct: 91   GVQPPRGVLLHGPPGCGKTMLAHAIAGELGVPFINISAPSVVSGMSGESEKTLRDTFDEA 150

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
             + AP ++FIDE+DAI P R+    E+ +R+VA  L  MD +   + D   V+VI ATNR
Sbjct: 151  KRVAPCLLFIDEIDAITPKRESAQREMERRIVAQFLTCMDDMSWEKNDNKPVIVIGATNR 210

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++ ALRR GR D EI +               VP    R +IL    S +    L+ 
Sbjct: 211  PDSLDAALRRAGRFDHEISM--------------GVPDEEARAQILRVQASKLR---LEG 253

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
            + +Y+++A  T G+VGADLAAL   A ++ ++R  K         S GTL   +  +  +
Sbjct: 254  DFDYMALAKATPGYVGADLAALTGAAGIIAVKRIFK-------QISEGTLVLPDNVAPAV 306

Query: 674  LQ-DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSG 732
            +  D D S  I     + +   +  +  +P +   +S   R T      +F     D   
Sbjct: 307  VSGDGDVSMAIDPPIAESVIPQASSSKLVPFATFDAS---RQTAGSSIIHFLRAHPDP-- 361

Query: 733  GMFMSEKGCA-LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
               ++E   A L +   DF  A   V+PS+ RE    VP V W D+G     + +L  A+
Sbjct: 362  ---LTEAQLAPLCITYSDFTLALQHVQPSSKREGFATVPDVTWADIGALHGTREELHMAI 418

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P +  E F  +G     G+L++GPPGC KTL+A+AVA+E+  NF++VKGPEL +K+VG
Sbjct: 419  VQPIRRPELFSAVGIVAACGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVG 478

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQ 910
            ESE+AVR +F++ARA++P +IFFDE+D L   R    D +S S  RV++ LL ELDGL  
Sbjct: 479  ESERAVRQVFSRARASSPCVIFFDELDALVPRR---DDSMSESSARVVNTLLTELDGLDA 535

Query: 911  RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS----- 965
            R +V VIAATNRPD IDPA+ RPGR D+LLYV  P+  +R EI R   R +P        
Sbjct: 536  RKSVYVIAATNRPDMIDPAMCRPGRLDKLLYVDLPSSVERAEIIRKMTRTVPLGDDNASA 595

Query: 966  ----DVNIRELACLSEGCTGADISLICREAAISAIEENLDASR----------------- 1004
                D  +RE     EG +GAD++ + REA ++A++  L A                   
Sbjct: 596  QDAIDALVRERC---EGYSGADLAALVREAGVAALKRALGALDEMDGFDGVGASGAQSVI 652

Query: 1005 ITMQHLKTAIRHVQPS----EIHSYKELSAKFQRL 1035
            +++     A+  VQPS    +   Y+ L +KF  L
Sbjct: 653  VSIADFGQALDKVQPSVSVAQRRKYESLRSKFAGL 687



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 162/319 (50%), Gaps = 15/319 (4%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P  +  D+GG  +   +++E V  P  H E +   G +PP G+L+ GPPGC KT++A A+
Sbjct: 56   PTTRLSDLGGVDQCVEKMLELVAMPLCHPEIYLHTGVQPPRGVLLHGPPGCGKTMLAHAI 115

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E G+ F+ +  P + S   GESEK +R  F +A+  AP ++F DEID +   R  ES 
Sbjct: 116  AGELGVPFINISAPSVVSGMSGESEKTLRDTFDEAKRVAPCLLFIDEIDAITPKR--ESA 173

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
               +  R+++Q L  +D +    N    V VI ATNRPD +D AL R GRFD  + +G P
Sbjct: 174  QREMERRIVAQFLTCMDDMSWEKNDNKPVIVIGATNRPDSLDAALRRAGRFDHEISMGVP 233

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI 1005
            +E  R +I R+   K+    D +   LA  + G  GAD++ +   A I A++      RI
Sbjct: 234  DEEARAQILRVQASKLRLEGDFDYMALAKATPGYVGADLAALTGAAGIIAVK------RI 287

Query: 1006 TMQHLKTAI---RHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMWTL 1062
              Q  +  +    +V P+ +    ++S      +  +     S  +L P  +  ++  T 
Sbjct: 288  FKQISEGTLVLPDNVAPAVVSGDGDVSMAIDPPIAESVIPQASSSKLVPFATFDASRQTA 347

Query: 1063 IKSISLFLCRFPAGLSQSE 1081
              SI  FL   P  L++++
Sbjct: 348  GSSIIHFLRAHPDPLTEAQ 366



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/253 (39%), Positives = 136/253 (53%), Gaps = 21/253 (8%)

Query: 399 FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           F  V      DI  L G  +E  +   I+         S++G+    GVLL GPPG GKT
Sbjct: 393 FATVPDVTWADIGALHGTREELHMA--IVQPIRRPELFSAVGIVAACGVLLWGPPGCGKT 450

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            LA+  A++S  N  +V GPE++++  GESE+A+ +VF  A  S+P V+F DELDA+ P 
Sbjct: 451 LLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFSRARASSPCVIFFDELDALVPR 510

Query: 519 RKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
           R D   E S R+V TLL  +DG+     V VIAATNRPD I+PA+ RPGRLD+ + +D+ 
Sbjct: 511 RDDSMSESSARVVNTLLTELDGLDARKSVYVIAATNRPDMIDPAMCRPGRLDKLLYVDL- 569

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHAL-----LSGMEHSLLDSEVEYLSMATHGFVGADLA 633
                        PS  +R EI+  +     L     S  D+    +     G+ GADLA
Sbjct: 570 -------------PSSVERAEIIRKMTRTVPLGDDNASAQDAIDALVRERCEGYSGADLA 616

Query: 634 ALCNEAALVCLRR 646
           AL  EA +  L+R
Sbjct: 617 ALVREAGVAALKR 629


>gi|260947222|ref|XP_002617908.1| hypothetical protein CLUG_01367 [Clavispora lusitaniae ATCC 42720]
 gi|238847780|gb|EEQ37244.1| hypothetical protein CLUG_01367 [Clavispora lusitaniae ATCC 42720]
          Length = 809

 Score =  365 bits (936), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 234/609 (38%), Positives = 338/609 (55%), Gaps = 72/609 (11%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGGL      L +++    +   +  + G+ P +GVLL+GPPG GKT++A   A + 
Sbjct: 183  LSSLGGLQSVTTQLMELVGLPILHPEIYQTTGVEPPRGVLLYGPPGCGKTTIANALAGEL 242

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELS 527
             V    ++ P VVS   GESE+ L E+F+ A   AP ++F+DE+DAI P R  G + E+ 
Sbjct: 243  QVPFINISAPSVVSGMSGESEKKLREIFEEARSLAPCIIFMDEIDAITPKRDGGAQREME 302

Query: 528  QRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSL 583
            +R+VA LL LMD +   +TDG  V+V+ ATNRPDS++ ALRR GR DREI ++       
Sbjct: 303  RRIVAQLLTLMDELTLDKTDGKPVVVLGATNRPDSLDSALRRAGRFDREICLN------- 355

Query: 584  LKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAAL 641
                   VP+  QR  IL  + S ++    DS   Y  +A  T GFVGADL +L   A +
Sbjct: 356  -------VPNEDQRCAILKTMTSSLKLEN-DSGFNYRELAKMTPGFVGADLKSLVTAAGI 407

Query: 642  VCLRRY--SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNIT---ESSRDCLDSASP 696
              ++R   S  +  ++++  T  + E +G         D + N T   +S  + L +   
Sbjct: 408  SAIKRIFESLSEIEAEIVSKTEQM-EIDGAVA-----PDPAANATFANKSEEEKLSTIQK 461

Query: 697  CTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMK 756
              S  P  L S  L                                L +   DF+ A   
Sbjct: 462  FLSKHPDPLTSEQL------------------------------APLSITYDDFKIALPT 491

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            ++P+A RE    VP V W++VG   +V+ +L   +  P K  E ++++G   P G+LM+G
Sbjct: 492  IQPTAKREGFATVPDVTWKNVGALAKVRMELHMCIVQPIKKPELYQKVGISAPAGVLMWG 551

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGC KTL+A+AVA+E+  NF++VKGPEL +K+VGESEKAVR +F +ARA+AP IIFFDE
Sbjct: 552  PPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESEKAVRQVFQRARASAPCIIFFDE 611

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            +D L   R   S     S RV++ LL ELDGL+ R  + V+ ATNRPD IDPA+LRPGR 
Sbjct: 612  LDALVPRRT--SSLSESSARVVNTLLTELDGLNDRQGIFVVGATNRPDMIDPAMLRPGRL 669

Query: 937  DRLLYVGPPNETDREEIFR--IHLRKIPCSSDVNIRELACLSEGC---TGADISLICREA 991
            D+ LY+  P   +R EI R  +   K P SSDV++  +A   + C   +GAD+S + REA
Sbjct: 670  DKTLYIELPTAEERLEILRTLVKANKTPLSSDVDLNVIAN-HQKCRNFSGADLSSLVREA 728

Query: 992  AISAIEENL 1000
             + A+++  
Sbjct: 729  GVFALKKKF 737



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/236 (41%), Positives = 132/236 (55%), Gaps = 11/236 (4%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P +    +GG + V TQLME V  P  H E ++  G  PP G+L++GPPGC KT +A A+
Sbjct: 179 PSITLSSLGGLQSVTTQLMELVGLPILHPEIYQTTGVEPPRGVLLYGPPGCGKTTIANAL 238

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  + F+ +  P + S   GESEK +R +F +AR+ AP IIF DEID   AI  K   
Sbjct: 239 AGELQVPFINISAPSVVSGMSGESEKKLREIFEEARSLAPCIIFMDEID---AITPKRDG 295

Query: 890 GVS--VSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           G    +  R+++QLL  +D L         V V+ ATNRPD +D AL R GRFDR + + 
Sbjct: 296 GAQREMERRIVAQLLTLMDELTLDKTDGKPVVVLGATNRPDSLDSALRRAGRFDREICLN 355

Query: 944 PPNETDREEIFRIHLRKIPCSSD--VNIRELACLSEGCTGADISLICREAAISAIE 997
            PNE  R  I +     +   +D   N RELA ++ G  GAD+  +   A ISAI+
Sbjct: 356 VPNEDQRCAILKTMTSSLKLENDSGFNYRELAKMTPGFVGADLKSLVTAAGISAIK 411



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 113/324 (34%), Positives = 165/324 (50%), Gaps = 49/324 (15%)

Query: 328 LSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSL 387
           LS I  FL    +K P  LT+E+  P              I ++      P +   +K  
Sbjct: 456 LSTIQKFL----SKHPDPLTSEQLAP------------LSITYDDFKIALPTIQPTAK-- 497

Query: 388 REGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKG 446
           REG      + ++NV           G L+K    L   I+    K  L   +G+    G
Sbjct: 498 REGFATVPDVTWKNV-----------GALAKVRMELHMCIVQPIKKPELYQKVGISAPAG 546

Query: 447 VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 506
           VL+ GPPG GKT LA+  A++S  N  +V GPE++++  GESE+A+ +VF  A  SAP +
Sbjct: 547 VLMWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESEKAVRQVFQRARASAPCI 606

Query: 507 VFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRP 566
           +F DELDA+ P R     E S R+V TLL  +DG+    G+ V+ ATNRPD I+PA+ RP
Sbjct: 607 IFFDELDALVPRRTSSLSESSARVVNTLLTELDGLNDRQGIFVVGATNRPDMIDPAMLRP 666

Query: 567 GRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH- 625
           GRLD+ + I++              P+  +RLEIL  L+     + L S+V+   +A H 
Sbjct: 667 GRLDKTLYIEL--------------PTAEERLEILRTLVKA-NKTPLSSDVDLNVIANHQ 711

Query: 626 ---GFVGADLAALCNEAALVCLRR 646
               F GADL++L  EA +  L++
Sbjct: 712 KCRNFSGADLSSLVREAGVFALKK 735


>gi|328767174|gb|EGF77225.1| hypothetical protein BATDEDRAFT_37479 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 828

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 218/594 (36%), Positives = 333/594 (56%), Gaps = 99/594 (16%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG  ++ A +++++ +         S+G++P +G+L+ GPPGTGKT +AR  A+++G  
Sbjct: 219  IGGCRRQLAQIRELVELPLRHPQLFKSIGIKPPRGILMFGPPGTGKTLVARAVANETGAF 278

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             F +NGPE++S+  GESE  L + F+ A +++PA++FIDE+DAIAP R+    E+ +R+V
Sbjct: 279  FFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKREKTNGEVERRVV 338

Query: 532  ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            + LL LMDG+     V+V+AATNRP+SI+PALRR GR DREI++               +
Sbjct: 339  SQLLTLMDGLKARSNVVVMAATNRPNSIDPALRRFGRFDREIDV--------------GI 384

Query: 592  PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR-RYSKI 650
            P P  RLEIL      M+    D ++E ++  THGFVG+D+A+LC+EAA+  +R +   I
Sbjct: 385  PDPTGRLEILRIHTKNMKLC-DDVDLEQIASETHGFVGSDMASLCSEAAIQQIREKMDLI 443

Query: 651  QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL-LSSS 709
                D + +                             + LDS +    +   +L +S+ 
Sbjct: 444  DLEEDTIDA-----------------------------EILDSLAVTMENFRYALGISNP 474

Query: 710  LPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
              LR T+ E+ +   N +    GG+                                   
Sbjct: 475  AALRETIVEVPNTSWNDI----GGL----------------------------------- 495

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
             KVK E       ++  +   VE P+K    F + G  P  G+L +GPPGC KTL+A+A+
Sbjct: 496  EKVKQE-------LQETVQYPVEHPEK----FLKFGMSPSKGVLFYGPPGCGKTLLAKAI 544

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA--AIRGKE 887
            A+E   NF+++KGPEL + W GESE  VR +F KARA AP ++FFDE+D +A     G  
Sbjct: 545  ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKARGGGGG 604

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             DG    DRV++Q+L E+DG++ + NV VI ATNRPD+ID ALLRPGR D+L+Y+  P+E
Sbjct: 605  GDGGGAGDRVLNQILTEMDGMNAKKNVFVIGATNRPDQIDGALLRPGRLDQLIYIPLPDE 664

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
              R  I +  LRK P S +V++  ++  + G +GAD++ IC+ A   AI E+++
Sbjct: 665  ASRLSILKATLRKSPVSQEVDLHFMSKATHGFSGADLTEICQRACKLAIRESIE 718



 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 117/231 (50%), Positives = 154/231 (66%), Gaps = 2/231 (0%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++D+GG R    Q+ E VE P +H + FK IG +PP GILMFGPPG  KTL+ARAVA
Sbjct: 213  QVGYDDIGGCRRQLAQIRELVELPLRHPQLFKSIGIKPPRGILMFGPPGTGKTLVARAVA 272

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DEID +A  R K ++G
Sbjct: 273  NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKREK-TNG 331

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV+SQLL  +DGL  R NV V+AATNRP+ IDPAL R GRFDR + VG P+ T R
Sbjct: 332  -EVERRVVSQLLTLMDGLKARSNVVVMAATNRPNSIDPALRRFGRFDREIDVGIPDPTGR 390

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
             EI RIH + +    DV++ ++A  + G  G+D++ +C EAAI  I E +D
Sbjct: 391  LEILRIHTKNMKLCDDVDLEQIASETHGFVGSDMASLCSEAAIQQIREKMD 441


>gi|391347147|ref|XP_003747826.1| PREDICTED: nuclear valosin-containing protein [Metaseiulus
            occidentalis]
          Length = 708

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 222/598 (37%), Positives = 327/598 (54%), Gaps = 77/598 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
             + +GG+ KE   +  ++         S+ G+ P +G L+HGPPG GKT L    A    
Sbjct: 148  FADMGGMEKELVEIVHLLTHLKHPEIYSNFGILPPRGFLIHGPPGCGKTMLVSAIAGQLK 207

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            + L  V+ PE+V+   GESEQ + E+F+ A  +AP + FIDE+DA+ P R++   E+ +R
Sbjct: 208  LPLLKVSAPEIVAGVSGESEQRIRELFEQAVNAAPCIFFIDEIDAVTPKRENAQREMEKR 267

Query: 530  MVATLLNLMDGVCRTD---GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +VA LL  +D +   +    VL++ AT+R DS++PALRR GR +RE+ +           
Sbjct: 268  IVAQLLTCIDDLSSRELENEVLLVGATHRLDSLDPALRRAGRFNREVSL----------- 316

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                +P+ A R  IL  L   +     D + ++++  T GFVGADL  L  EA  + ++R
Sbjct: 317  ---GIPTEASRSSILRVLCRSLRLEN-DFDFDHIAHLTPGFVGADLQDLTREATSLAVKR 372

Query: 647  YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLL 706
              K                     +T L+D                         P SLL
Sbjct: 373  LIK-------------------SIETRLEDGGAG---------------------PRSLL 392

Query: 707  SSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVI 766
              S+                +SD +      E+   LK+   DF  A   V+PSA RE  
Sbjct: 393  EQSI-------------RTLMSDWN---LSQEELNELKIFKQDFLDAIQLVQPSAKREGF 436

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
              VP V W+DVG  ++++  L   V    KH+E ++ +G    TGILM GPPGC KTL+A
Sbjct: 437  ATVPDVTWKDVGAMKDIRETLNIYVLSAVKHRERYEALGLNTSTGILMHGPPGCGKTLIA 496

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+E+G+NF++VKGPEL + +VGESEKA+R +F +ARA+AP +IFFDE+D L   R +
Sbjct: 497  KAVANESGINFISVKGPELLNMYVGESEKAIRQVFQRARASAPCVIFFDELDALCPRRSE 556

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
              DG S S RV++QLL E+DGL  R  V V+AATNRPD ID A+LRPGR D +++VG PN
Sbjct: 557  SGDGGSTS-RVVNQLLTEMDGLEARKQVFVLAATNRPDIIDKAMLRPGRLDHIIHVGLPN 615

Query: 947  ETDREEIFRIHLRK--IPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
              DRE+I R   +    P    +++  +A L+E  +GA+++ + + A+ISA+ + L A
Sbjct: 616  RDDREDILRALTKNSTKPKIEGISLAAIADLTEAFSGAELASLVKTASISALTQQLRA 673



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 36/305 (11%)

Query: 370 HETKVYLYPPLNAVSKSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIII 428
           +E K++    L+A+     +   P+A+ E F  V     +D+    G  K+     +I +
Sbjct: 411 NELKIFKQDFLDAI-----QLVQPSAKREGFATVPDVTWKDV----GAMKDIRETLNIYV 461

Query: 429 SSSVK--STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 486
            S+VK      +LGL  + G+L+HGPPG GKT +A+  A++SG+N  +V GPE+++   G
Sbjct: 462 LSAVKHRERYEALGLNTSTGILMHGPPGCGKTLIAKAVANESGINFISVKGPELLNMYVG 521

Query: 487 ESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS-QRMVATLLNLMDGVCRTD 545
           ESE+A+ +VF  A  SAP V+F DELDA+ P R + G+  S  R+V  LL  MDG+    
Sbjct: 522 ESEKAIRQVFQRARASAPCVIFFDELDALCPRRSESGDGGSTSRVVNQLLTEMDGLEARK 581

Query: 546 GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
            V V+AATNRPD I+ A+ RPGRLD  I +               +P+   R +IL AL 
Sbjct: 582 QVFVLAATNRPDIIDKAMLRPGRLDHIIHV--------------GLPNRDDREDILRALT 627

Query: 606 SGMEHSLLDSEVEYLSMA-----THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHST 660
                     ++E +S+A     T  F GA+LA+L   A++  L +  +   +  V+ + 
Sbjct: 628 KNSTK----PKIEGISLAAIADLTEAFSGAELASLVKTASISALTQQLRADPTKAVILNE 683

Query: 661 GTLFE 665
               E
Sbjct: 684 NHFLE 688



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 130/238 (54%), Gaps = 10/238 (4%)

Query: 765 VILEVPKVKWEDVGGQREVKTQLMEAVEWPQ--KHQEAFKRIGTRPPTGILMFGPPGCSK 822
           V L  P + + D+GG   ++ +L+E V      KH E +   G  PP G L+ GPPGC K
Sbjct: 139 VPLLTPTITFADMGG---MEKELVEIVHLLTHLKHPEIYSNFGILPPRGFLIHGPPGCGK 195

Query: 823 TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
           T++  A+A +  L  L V  PE+ +   GESE+ +R LF +A   AP I F DEID +  
Sbjct: 196 TMLVSAIAGQLKLPLLKVSAPEIVAGVSGESEQRIRELFEQAVNAAPCIFFIDEIDAVTP 255

Query: 883 IRGKESDGVSVSDRVMSQLLVELDGLHQRV---NVTVIAATNRPDKIDPALLRPGRFDRL 939
            R  E+    +  R+++QLL  +D L  R     V ++ AT+R D +DPAL R GRF+R 
Sbjct: 256 KR--ENAQREMEKRIVAQLLTCIDDLSSRELENEVLLVGATHRLDSLDPALRRAGRFNRE 313

Query: 940 LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           + +G P E  R  I R+  R +   +D +   +A L+ G  GAD+  + REA   A++
Sbjct: 314 VSLGIPTEASRSSILRVLCRSLRLENDFDFDHIAHLTPGFVGADLQDLTREATSLAVK 371


>gi|401838109|gb|EJT41888.1| RIX7-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 837

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 232/632 (36%), Positives = 353/632 (55%), Gaps = 72/632 (11%)

Query: 388  REGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKG 446
            +EGT    + + +  ++     +  LGG+    A L ++I +         S G+ P +G
Sbjct: 182  KEGTSKVKRQKVKEDRSPPNSSLKTLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRG 241

Query: 447  VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 506
            VLLHGPPG GKTS+A   A +  V   +++ P VVS   GESE+ + ++FD A   AP +
Sbjct: 242  VLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEAKSLAPCL 301

Query: 507  VFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIE 560
            VF DE+DAI P R DGG   E+ +R+VA LL  MD +   +T+G  V++I ATNRPDS++
Sbjct: 302  VFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLD 360

Query: 561  PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY- 619
             ALRR GR DREI ++              VP+   RL IL  +   ++   +D  +++ 
Sbjct: 361  SALRRAGRFDREICLN--------------VPNEVSRLHILRKMSDDLK---IDGAIDFA 403

Query: 620  -LSMATHGFVGADLAALCNEAALVCLRR----YSKIQTSSDVL-HSTGTLFEFEGHSDTM 673
             LS  T GFVGADL AL   A    ++R    Y+ IQ+  +    S+G   E        
Sbjct: 404  KLSKLTPGFVGADLKALVTAAGTCAIKRIFETYANIQSPPNTTADSSGDRMEI------- 456

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
                D + N  ES+   L + +     LP S+          V +   N+   +SD    
Sbjct: 457  ----DEAANEDESN---LKNTANMIDPLPLSV----------VQQFIHNYPEPLSDDQLS 499

Query: 734  MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
            +        L ++  DF KA   ++P+A RE    VP V W +VG  + V+ +L  A+  
Sbjct: 500  L--------LSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRIELNMAIVQ 551

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P K  E ++++G   P G+L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGES
Sbjct: 552  PIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGES 611

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            E+++R +F +ARA+ P +IFFDE+D L   R  ++     S RV++ LL ELDGL+ R  
Sbjct: 612  ERSIRQVFTRARASVPCVIFFDELDALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRG 669

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRE 971
            + VI ATNRPD IDPA+LRPGR D+ L++  PN  ++ +I +   +    P S DV+  +
Sbjct: 670  IFVIGATNRPDMIDPAMLRPGRLDKTLFIELPNMEEKLDIIKTLTKSHGTPLSGDVDFEK 729

Query: 972  LACLSEGC---TGADISLICREAAISAIEENL 1000
            +   +E C   +GAD++ + RE+++ A++ N 
Sbjct: 730  I-IKNEKCNNFSGADLAALVRESSVLALKRNF 760


>gi|82538797|ref|XP_723826.1| cell division cycle protein 48 [Plasmodium yoelii yoelii 17XNL]
 gi|23478257|gb|EAA15391.1| cell division cycle protein 48 homolog [Plasmodium yoelii yoelii]
          Length = 815

 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 226/581 (38%), Positives = 318/581 (54%), Gaps = 98/581 (16%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A ++++I +         +LG++P +GVLL+GPPG+GKT +AR  A+++G  
Sbjct: 207 IGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAF 266

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPEV+S+  GE+E  L   F+ A +++PA++FIDE+D+IAP R+    E+ +R+V
Sbjct: 267 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVV 326

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VIAATNR +SI+PALRR GR DREI+I               V
Sbjct: 327 SQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDI--------------GV 372

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           P    R EIL      M+ S  D ++E L+  THGFVGADLA LC EAAL C+R      
Sbjct: 373 PDDNGRFEILRIHTKNMKLS-PDVKLEELASNTHGFVGADLAQLCTEAALTCIRE----- 426

Query: 652 TSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLP 711
              DV+                L+D    + + ES   C+      T D     L +  P
Sbjct: 427 -KMDVID---------------LEDEIIDKEVLESM--CV------TQDHFNMALGTCNP 462

Query: 712 --LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
             LR TV E+     N   D  GG+   +                     + +RE+IL  
Sbjct: 463 SSLRETVVEVP----NVKWDDIGGLDEVK---------------------NTLREMIL-- 495

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
                                ++ P K    F++ G  P  G+L +GPPGC KTL+A+AV
Sbjct: 496 -------------------YPIDHPDK----FEKFGMAPSRGVLFYGPPGCGKTLLAKAV 532

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-S 888
           ASE   NF+++KGPEL + W GESE  VR +F KARA AP ++FFDE+D +   RG    
Sbjct: 533 ASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLG 592

Query: 889 DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
           DG    DRVM+QLL E+DG+  + N+  I ATNRP+ +D ALLRPGR D+L+Y+  P+  
Sbjct: 593 DGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLA 652

Query: 949 DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            R  I    LRK P + +V I  LA  + G +GAD++ +C+
Sbjct: 653 ARISILSAILRKCPVADNVPIDFLAQKTAGFSGADLAELCQ 693



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/268 (41%), Positives = 158/268 (58%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++D+GG ++   Q+ E +E P +H   FK +G +PP G+L++GPPG  KT +ARAVA
Sbjct: 201  EIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVA 260

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GE+E  +R  F +A  N+P+IIF DEID +A  R K +  
Sbjct: 261  NETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNG- 319

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV+SQLL  +DG+  R  V VIAATNR + IDPAL R GRFDR + +G P++  R
Sbjct: 320  -EVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGR 378

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR------ 1004
             EI RIH + +  S DV + ELA  + G  GAD++ +C EAA++ I E +D         
Sbjct: 379  FEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEII 438

Query: 1005 ---------ITMQHLKTAIRHVQPSEIH 1023
                     +T  H   A+    PS + 
Sbjct: 439  DKEVLESMCVTQDHFNMALGTCNPSSLR 466


>gi|168019251|ref|XP_001762158.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686562|gb|EDQ72950.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 513

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 179/280 (63%), Positives = 215/280 (76%), Gaps = 4/280 (1%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            SE G  L ++L DFE A+ +VRPSAMREV+LE+PK +W D+GG  +VK QL EAV WPQK
Sbjct: 236  SEAG--LTVDLDDFEAAKTRVRPSAMREVMLEIPKSRWADIGGMEDVKQQLQEAVIWPQK 293

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            H +    IG RP  G+L++GPPGCSKTL+ARA ASEAGLNF+AVKGPELFSKWVGESEKA
Sbjct: 294  HGDRLTTIGARPIRGVLLYGPPGCSKTLLARACASEAGLNFIAVKGPELFSKWVGESEKA 353

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGK-ESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            V+SLFA+AR  APSI+FFDEID LA  R   ++ G+SV DRVMSQLL E+DGL +   VT
Sbjct: 354  VQSLFARARTAAPSIVFFDEIDALAVARSSGDTGGLSVGDRVMSQLLTEMDGLKRSTGVT 413

Query: 916  VIAATNRPDKIDPALLRP-GRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC 974
            VIAATNRPD IDPALLRP GRFDR LYVGPP+E  REEIF+I LR  P S  VN+  LA 
Sbjct: 414  VIAATNRPDIIDPALLRPAGRFDRQLYVGPPDEASREEIFKIQLRNTPYSPLVNLGTLAA 473

Query: 975  LSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAI 1014
             +   TGADIS +CR AA++A+EE+L+A ++   H   A+
Sbjct: 474  RTPSYTGADISAVCRVAAMAALEEDLNAVQVEAHHFDMAL 513



 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 136/244 (55%), Positives = 174/244 (71%), Gaps = 20/244 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + LGGL +E   +K I+  S ++   L+  GL P +G+LL+GPPGTGK++LAR  A ++G
Sbjct: 4   TSLGGLEQEIEGIKQIVRFSLLQPELLAGYGLPPHRGILLYGPPGTGKSTLARAAACEAG 63

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           V LF +NGP+VVSQ YGESE+AL  VF +A ++AP+VV IDE+DAIAPARK+G EEL+QR
Sbjct: 64  VPLFAINGPDVVSQFYGESEEALRAVFTAAEEAAPSVVVIDEVDAIAPARKEGSEELAQR 123

Query: 530 MVATLLNLMD--GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           MV  LL LMD  G  R   VLVIAATNRPD+++PALRRPGR D+EIEI            
Sbjct: 124 MVGALLKLMDEGGNKR---VLVIAATNRPDTLDPALRRPGRFDKEIEI------------ 168

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
              VP+   R EIL +LLS M HSL DSE+  L+  THGFVGADL++LC+EAAL  LRR 
Sbjct: 169 --GVPTSKGRHEILRSLLSKMRHSLQDSEILELAAGTHGFVGADLSSLCHEAALSALRRS 226

Query: 648 SKIQ 651
            +++
Sbjct: 227 IQLK 230



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 139/231 (60%), Gaps = 6/231 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +  +GG  +    + + V +     E     G  P  GIL++GPPG  K+ +ARA A 
Sbjct: 1    VHYTSLGGLEQEIEGIKQIVRFSLLQPELLAGYGLPPHRGILLYGPPGTGKSTLARAAAC 60

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EAG+   A+ GP++ S++ GESE+A+R++F  A   APS++  DE+D +A  R + S+  
Sbjct: 61   EAGVPLFAINGPDVVSQFYGESEEALRAVFTAAEEAAPSVVVIDEVDAIAPARKEGSE-- 118

Query: 892  SVSDRVMSQLLVELD-GLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
             ++ R++  LL  +D G ++R  V VIAATNRPD +DPAL RPGRFD+ + +G P    R
Sbjct: 119  ELAQRMVGALLKLMDEGGNKR--VLVIAATNRPDTLDPALRRPGRFDKEIEIGVPTSKGR 176

Query: 951  EEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             EI R  L K+  S  D  I ELA  + G  GAD+S +C EAA+SA+  ++
Sbjct: 177  HEILRSLLSKMRHSLQDSEILELAAGTHGFVGADLSSLCHEAALSALRRSI 227



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 138/239 (57%), Gaps = 20/239 (8%)

Query: 411 SKLGGLSKEYAILKDIII-SSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GG+      L++ +I        L+++G RP +GVLL+GPPG  KT LAR CA ++G
Sbjct: 272 ADIGGMEDVKQQLQEAVIWPQKHGDRLTTIGARPIRGVLLYGPPGCSKTLLARACASEAG 331

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD---GGEEL 526
           +N   V GPE+ S+  GESE+A+  +F  A  +AP++VF DE+DA+A AR     GG  +
Sbjct: 332 LNFIAVKGPELFSKWVGESEKAVQSLFARARTAAPSIVFFDEIDALAVARSSGDTGGLSV 391

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRP-GRLDREIEIDMSFLFSLLK 585
             R+++ LL  MDG+ R+ GV VIAATNRPD I+PAL RP GR DR++ +          
Sbjct: 392 GDRVMSQLLTEMDGLKRSTGVTVIAATNRPDIIDPALLRPAGRFDRQLYV---------- 441

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 P  A R EI    L    +S L   +  L+  T  + GAD++A+C  AA+  L
Sbjct: 442 ----GPPDEASREEIFKIQLRNTPYSPL-VNLGTLAARTPSYTGADISAVCRVAAMAAL 495


>gi|170108166|ref|XP_001885292.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164639768|gb|EDR04037.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 770

 Score =  362 bits (928), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 232/581 (39%), Positives = 331/581 (56%), Gaps = 53/581 (9%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G++P +GVLLHGPPG GKT LA   A + GV   +++ P +VS   GESE+ L + F+ A
Sbjct: 152  GVQPPRGVLLHGPPGCGKTLLANAMAGELGVPFISISAPSIVSGMSGESEKTLRDTFEEA 211

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
             + AP ++FIDE+DAI P R+    E+ +R+VA  L  MD +   +TD   V+V+ ATNR
Sbjct: 212  KRVAPCLLFIDEIDAITPKRESAQREMERRIVAQFLTCMDDMSWDKTDNKPVIVMGATNR 271

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++ ALRR GR D EI +               VP    R +IL  L + +    LD 
Sbjct: 272  PDSLDAALRRAGRFDHEISM--------------GVPDEEARSKILQVLCAKLR---LDG 314

Query: 616  EVEY--LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTM 673
            +  +  L+ AT G+VGADL+AL   A ++ ++R  K  +   ++    T    +G S T+
Sbjct: 315  DFNFTTLAKATPGYVGADLSALTGAAGIIAVKRIFKQLSDGTLILPDPT---PDGVSSTL 371

Query: 674  LQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGG 733
             QD   S  I   S     +  P       S LSS L   G+++       + +++S   
Sbjct: 372  EQD--VSMIIDPPSTPQAQADPPPPKASILSGLSSQLSA-GSIAHFLIAHPDPLTES--- 425

Query: 734  MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 793
                 +   L +   DF  A  +V+PS+ RE    VP V W D+G     + +L  A+  
Sbjct: 426  -----QLAPLCITSADFILALKQVQPSSQREGFATVPDVTWADIGALHATREELHMAIVQ 480

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 853
            P +  E F  +G     G+L++GPPGC KTL+A+AVA+E+  NF++VKGPEL +K+VGES
Sbjct: 481  PIRRPELFSAVGIEAACGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGES 540

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRV 912
            E+AVR +F++ARA++P +IFFDE+D L   R    D +S S  RV++ LL ELDGL  R 
Sbjct: 541  ERAVRQVFSRARASSPCVIFFDELDALVPRR---DDSLSESSARVVNTLLTELDGLDTRK 597

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC------SSD 966
             V VIAATNRPD IDPA++RPGR D+LLYV  P   +R EI R   RK+P       S+D
Sbjct: 598  AVYVIAATNRPDMIDPAMVRPGRLDKLLYVDLPQPEERSEILRTMTRKVPLGNLEGQSAD 657

Query: 967  VNIRELACL-----SEGCTGADISLICREAAISAIEENLDA 1002
            + IRE   L      +G +GAD++ + REA + A++  L A
Sbjct: 658  L-IRERIELLVKEKCDGYSGADLAALVREAGVIALKRTLGA 697



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/266 (39%), Positives = 145/266 (54%), Gaps = 30/266 (11%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKE--YAILKDIIISSSVKSTLSSLGLRPTKGVLL 449
           P++Q E F  V      DI  L    +E   AI++ I          S++G+    GVLL
Sbjct: 446 PSSQREGFATVPDVTWADIGALHATREELHMAIVQPI----RRPELFSAVGIEAACGVLL 501

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
            GPPG GKT LA+  A++S  N  +V GPE++++  GESE+A+ +VF  A  S+P V+F 
Sbjct: 502 WGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFSRARASSPCVIFF 561

Query: 510 DELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
           DELDA+ P R D   E S R+V TLL  +DG+     V VIAATNRPD I+PA+ RPGRL
Sbjct: 562 DELDALVPRRDDSLSESSARVVNTLLTELDGLDTRKAVYVIAATNRPDMIDPAMVRPGRL 621

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL--------LSGMEHSLLDSEVEYL- 620
           D+ + +D+              P P +R EIL  +        L G    L+   +E L 
Sbjct: 622 DKLLYVDL--------------PQPEERSEILRTMTRKVPLGNLEGQSADLIRERIELLV 667

Query: 621 SMATHGFVGADLAALCNEAALVCLRR 646
                G+ GADLAAL  EA ++ L+R
Sbjct: 668 KEKCDGYSGADLAALVREAGVIALKR 693



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 128/232 (55%), Gaps = 6/232 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG      +++E V  P  H E +   G +PP G+L+ GPPGC KTL+A A+
Sbjct: 117 PTARLSDLGGVEACVEKMLELVAMPLCHPEVYLHTGVQPPRGVLLHGPPGCGKTLLANAM 176

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ F+++  P + S   GESEK +R  F +A+  AP ++F DEID +   R  ES 
Sbjct: 177 AGELGVPFISISAPSIVSGMSGESEKTLRDTFEEAKRVAPCLLFIDEIDAITPKR--ESA 234

Query: 890 GVSVSDRVMSQLLVELDGLH----QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++Q L  +D +         V V+ ATNRPD +D AL R GRFD  + +G P
Sbjct: 235 QREMERRIVAQFLTCMDDMSWDKTDNKPVIVMGATNRPDSLDAALRRAGRFDHEISMGVP 294

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           +E  R +I ++   K+    D N   LA  + G  GAD+S +   A I A++
Sbjct: 295 DEEARSKILQVLCAKLRLDGDFNFTTLAKATPGYVGADLSALTGAAGIIAVK 346


>gi|409076418|gb|EKM76790.1| hypothetical protein AGABI1DRAFT_122483 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 779

 Score =  361 bits (927), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 229/608 (37%), Positives = 328/608 (53%), Gaps = 72/608 (11%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G++P +GVLLHGPPG GKT LA   A + G+    ++ P +VS   GESE+ L + F+ A
Sbjct: 126  GVQPPRGVLLHGPPGCGKTLLANAMAGELGIPFINISAPSIVSGMSGESEKTLRDTFEEA 185

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
             + AP ++FIDE+DAI P R+    E+ +R+VA  L  MD +   + D   V+VI ATNR
Sbjct: 186  KRVAPCLLFIDEIDAITPKRESAQREMERRIVAQFLTCMDDMSWEKNDNRPVIVIGATNR 245

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++ ALRR GR D EI +               VP    R +IL  L + +    L  
Sbjct: 246  PDSLDAALRRAGRFDHEISM--------------GVPDDEARAKILRVLCAKLR---LSG 288

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFE----G 668
            + ++L+ A  T G+VGADLAAL   A ++ ++R + ++   + VL    T+ +      G
Sbjct: 289  DFDFLAFAKATPGYVGADLAALTGAAGIIAVKRIFKQLSDGTLVLPEDVTVEDITTAVLG 348

Query: 669  HSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRG--TVSEIADNFHNG 726
            H     QD D    I   S   +    P T D P   +++S P+      SE  ++    
Sbjct: 349  HETEKRQDKDQGAVIALGSGQDM----PMTIDSP---IAASTPIAAPAATSERTNSLSFP 401

Query: 727  VSDSSGGMFMSEKGCALKLELV--------DFEKARMKVRPSAMREVILEVPKVKWEDVG 778
                S   F++     L    +        DF  A  +V+PS+ RE    VP V W D+G
Sbjct: 402  TVPGSIAHFLNAHPSPLTPNQLSPLFITSEDFTHALKQVQPSSKREGFATVPDVSWSDIG 461

Query: 779  GQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFL 838
                 + +L  A+  P K  E F+R+G     G+L++GPPGC KTL+A+AVA+E+  NF+
Sbjct: 462  ALHTTREELHMAIVQPIKRPELFRRVGITAACGVLLWGPPGCGKTLLAKAVANESRANFI 521

Query: 839  AVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS-VSDRV 897
            +VKGPEL +K+VGESE+AVR +F++ARA++P +IFFDE+D L   R    D +S  S RV
Sbjct: 522  SVKGPELLNKYVGESERAVRQVFSRARASSPCVIFFDELDALVPRR---DDSLSEFSARV 578

Query: 898  MSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIH 957
            ++ LL ELDGL  R  V VIAATNRPD IDPA++RPGR D+LLYV  P   +R EI    
Sbjct: 579  VNTLLTELDGLDSRKGVYVIAATNRPDIIDPAMVRPGRLDKLLYVDLPGGDERAEIIGTM 638

Query: 958  LRKIPCSS----DVNIRELACLS-------------------EGCTGADISLICREAAIS 994
             R +P  S    D+    +  +                    +G +GAD++ + REA + 
Sbjct: 639  TRTVPLGSLKHDDIAEGRIGAIKGGNENVKAQLMELVKSAKCDGYSGADLAALVREAGVF 698

Query: 995  AIEENLDA 1002
            A+   L A
Sbjct: 699  ALRRTLGA 706



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 128/232 (55%), Gaps = 6/232 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG      +++E V  P  H E +   G +PP G+L+ GPPGC KTL+A A+
Sbjct: 91  PSARLSDLGGVETCVEKMLELVAMPLCHPEVYLHTGVQPPRGVLLHGPPGCGKTLLANAM 150

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ F+ +  P + S   GESEK +R  F +A+  AP ++F DEID +   R  ES 
Sbjct: 151 AGELGIPFINISAPSIVSGMSGESEKTLRDTFEEAKRVAPCLLFIDEIDAITPKR--ESA 208

Query: 890 GVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++Q L  +D +    N    V VI ATNRPD +D AL R GRFD  + +G P
Sbjct: 209 QREMERRIVAQFLTCMDDMSWEKNDNRPVIVIGATNRPDSLDAALRRAGRFDHEISMGVP 268

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           ++  R +I R+   K+  S D +    A  + G  GAD++ +   A I A++
Sbjct: 269 DDEARAKILRVLCAKLRLSGDFDFLAFAKATPGYVGADLAALTGAAGIIAVK 320



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/216 (41%), Positives = 125/216 (57%), Gaps = 8/216 (3%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+    GVLL GPPG GKT LA+  A++S  N  +V GPE++++  GESE+A+ +VF  
Sbjct: 487 VGITAACGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFSR 546

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A  S+P V+F DELDA+ P R D   E S R+V TLL  +DG+    GV VIAATNRPD 
Sbjct: 547 ARASSPCVIFFDELDALVPRRDDSLSEFSARVVNTLLTELDGLDSRKGVYVIAATNRPDI 606

Query: 559 IEPALRRPGRLDREIEIDM-------SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           I+PA+ RPGRLD+ + +D+         + ++ +  P          E     + G   +
Sbjct: 607 IDPAMVRPGRLDKLLYVDLPGGDERAEIIGTMTRTVPLGSLKHDDIAEGRIGAIKGGNEN 666

Query: 612 LLDSEVEYLSMAT-HGFVGADLAALCNEAALVCLRR 646
           +    +E +  A   G+ GADLAAL  EA +  LRR
Sbjct: 667 VKAQLMELVKSAKCDGYSGADLAALVREAGVFALRR 702


>gi|241999600|ref|XP_002434443.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215497773|gb|EEC07267.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 737

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 242/642 (37%), Positives = 341/642 (53%), Gaps = 90/642 (14%)

Query: 394  NAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPP 453
            N Q E   V  T     + LGG+      + ++++          LG+ P +G LLHGPP
Sbjct: 147  NRQKEI--VLMTPTTKFADLGGMEGPLEEICNMLMHLKHPEVYKKLGVVPPRGFLLHGPP 204

Query: 454  GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
            G GKT LA   A +  + +  V  PE+V+   GESE+ + E+FD A  SAP + FIDE+D
Sbjct: 205  GCGKTLLAHAIAGELEMPMIKVAAPEIVAGVSGESEERIRELFDKAVNSAPCIFFIDEID 264

Query: 514  AIAPARKDGGEELSQRMVATLLNLMDGVCRTD---GVLVIAATNRPDSIEPALRRPGRLD 570
            A+ P R+    E+ +R+VA LL+ MD + + D    VLVI ATNRPDS++PALRR GR D
Sbjct: 265  AVTPKRETAQREMERRIVAQLLSSMDDLSQRDLPAEVLVIGATNRPDSLDPALRRAGRFD 324

Query: 571  REIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFV 628
            REI +               +P  A R  IL  L   +    L   V   ++A  T G V
Sbjct: 325  REICL--------------GIPDEAARARILGVLCRKL---TLGPGVNLSAVAHRTPGHV 367

Query: 629  GADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSR 688
            GADL         + L R + +   + +  S              ++D   +    E  R
Sbjct: 368  GADL---------MALTREATMSAINRIFRS--------------IEDKVIAMVGGEPKR 404

Query: 689  DCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELV 748
              LD+A         SLL    PL     E   N   G+ D                   
Sbjct: 405  K-LDTA--------LSLLKEVPPLD---EEQLKNLSVGMDD------------------- 433

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
             FE A   V+PSA RE    VP V W+DVG    ++  L  A+  P +H++ ++ +G   
Sbjct: 434  -FESALKLVQPSAKREGFATVPDVTWDDVGALTSIREALQVAILAPVRHRDKYEMLGLTT 492

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            PTGIL+ GPPGC KTL+A+A+A+E+G+NF++VKGPEL + +VGESE+AVR  F +AR ++
Sbjct: 493  PTGILLHGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQCFQRARNSS 552

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P +IFFDE+D L   R   +DG S S RV++QLL E+DGL  R  V V+AATNRPD IDP
Sbjct: 553  PCVIFFDELDALCPRRSDSADGGSAS-RVVNQLLTEMDGLEPRKQVFVLAATNRPDIIDP 611

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELACLS--EGCTGAD 983
            A+LRPGR D +LYVG P+  +R EI +   R   + P ++ V++ EL   S  +G +GAD
Sbjct: 612  AMLRPGRLDEVLYVGLPSPDERVEILKTLTRNGSRPPLNASVSLEELGKDSRCDGFSGAD 671

Query: 984  ISLICREAAISA----IEENLDASRIT-MQHLKTAIRHVQPS 1020
            ++ + R+AA+ A    ++E  DA  +   +H   A + V  S
Sbjct: 672  LAALVRQAAVIALTAFLKEGSDAKLVVGCEHFDAAFQKVTAS 713



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 142/249 (57%), Gaps = 14/249 (5%)

Query: 755 MKVRPSAMREVILEVPKVKWEDVGGQR----EVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
           +K R +  +E++L  P  K+ D+GG      E+   LM       KH E +K++G  PP 
Sbjct: 142 LKNRMNRQKEIVLMTPTTKFADLGGMEGPLEEICNMLMHL-----KHPEVYKKLGVVPPR 196

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           G L+ GPPGC KTL+A A+A E  +  + V  PE+ +   GESE+ +R LF KA  +AP 
Sbjct: 197 GFLLHGPPGCGKTLLAHAIAGELEMPMIKVAAPEIVAGVSGESEERIRELFDKAVNSAPC 256

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR---VNVTVIAATNRPDKID 927
           I F DEID +   R  E+    +  R+++QLL  +D L QR     V VI ATNRPD +D
Sbjct: 257 IFFIDEIDAVTPKR--ETAQREMERRIVAQLLSSMDDLSQRDLPAEVLVIGATNRPDSLD 314

Query: 928 PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLI 987
           PAL R GRFDR + +G P+E  R  I  +  RK+     VN+  +A  + G  GAD+  +
Sbjct: 315 PALRRAGRFDREICLGIPDEAARARILGVLCRKLTLGPGVNLSAVAHRTPGHVGADLMAL 374

Query: 988 CREAAISAI 996
            REA +SAI
Sbjct: 375 TREATMSAI 383



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 159/318 (50%), Gaps = 33/318 (10%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      D+  L  + +   +   I+     +     LGL    G+LLHG
Sbjct: 443 PSAKREGFATVPDVTWDDVGALTSIREALQVA--ILAPVRHRDKYEMLGLTTPTGILLHG 500

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ + F  A  S+P V+F DE
Sbjct: 501 PPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQCFQRARNSSPCVIFFDE 560

Query: 512 LDAIAPARKDGGEELS-QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLD 570
           LDA+ P R D  +  S  R+V  LL  MDG+     V V+AATNRPD I+PA+ RPGRLD
Sbjct: 561 LDALCPRRSDSADGGSASRVVNQLLTEMDGLEPRKQVFVLAATNRPDIIDPAMLRPGRLD 620

Query: 571 REIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HG 626
             + +               +PSP +R+EIL  L        L++ V    +       G
Sbjct: 621 EVLYV--------------GLPSPDERVEILKTLTRNGSRPPLNASVSLEELGKDSRCDG 666

Query: 627 FVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCS----RN 682
           F GADLAAL  +AA++ L  +  ++  SD     G       H D   Q    S    RN
Sbjct: 667 FSGADLAALVRQAAVIALTAF--LKEGSDAKLVVGC-----EHFDAAFQKVTASNKGHRN 719

Query: 683 ITESSRDCLDSASPCTSD 700
             + +R  + S  P  ++
Sbjct: 720 FKKPARTSIRSEEPSGTE 737


>gi|426195245|gb|EKV45175.1| hypothetical protein AGABI2DRAFT_186927 [Agaricus bisporus var.
            bisporus H97]
          Length = 805

 Score =  359 bits (922), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 230/608 (37%), Positives = 327/608 (53%), Gaps = 72/608 (11%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G++P +GVLLHGPPG GKT LA   A + G+    ++ P +VS   GESE+ L + F+ A
Sbjct: 152  GVQPPRGVLLHGPPGCGKTLLANAMAGELGIPFINISAPSIVSGMSGESEKTLRDTFEEA 211

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
             + AP ++FIDE+DAI P R+    E+ +R+VA  L  MD +   + D   V+VI ATNR
Sbjct: 212  KRVAPCLLFIDEIDAITPKRESAQREMERRIVAQFLTCMDDMSWEKNDNKPVIVIGATNR 271

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++ ALRR GR D EI +               VP    R +IL  L + +    L  
Sbjct: 272  PDSLDAALRRAGRFDHEISM--------------GVPDDEARAKILRVLCAKLR---LSG 314

Query: 616  EVEYLSMA--THGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFE----G 668
            + ++L+ A  T G+VGADLAAL   A ++ ++R + ++   + VL    T+ +      G
Sbjct: 315  DFDFLAFAKATPGYVGADLAALTGAAGIIAVKRIFKQLSDGTLVLPEDVTVEDIATAVLG 374

Query: 669  HSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRG--TVSEIADNFHNG 726
            H     Q  D    I   S    D   P T D P   +++S P+      SE  ++    
Sbjct: 375  HETEKRQVKDQGAVIELGS----DQDMPMTIDSP---IAASTPIAAPAATSERTNSLSFP 427

Query: 727  VSDSSGGMFMSEKGCALKLELV--------DFEKARMKVRPSAMREVILEVPKVKWEDVG 778
                S   F++     L    +        DF  A  +V+PS+ RE    VP V W D+G
Sbjct: 428  TVPGSIAHFLNAHPSPLTPNQLSPLFITSEDFTHALKQVQPSSKREGFATVPDVSWSDIG 487

Query: 779  GQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFL 838
                 + +L  A+  P K  E F+R+G     G+L++GPPGC KTL+A+AVA+E+  NF+
Sbjct: 488  ALHTTREELHMAIVQPIKRPELFRRVGITAACGVLLWGPPGCGKTLLAKAVANESRANFI 547

Query: 839  AVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RV 897
            +VKGPEL +K+VGESE+AVR +F++ARA++P +IFFDE+D L   R    D +S S  RV
Sbjct: 548  SVKGPELLNKYVGESERAVRQVFSRARASSPCVIFFDELDALVPRR---DDSLSESSARV 604

Query: 898  MSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIH 957
            ++ LL ELDGL  R  V VIAATNRPD IDPA++RPGR D+LLYV  P   +R EI    
Sbjct: 605  VNTLLTELDGLDSRKGVYVIAATNRPDIIDPAMVRPGRLDKLLYVDLPGGDERAEIIGTM 664

Query: 958  LRKIPCSS---------------------DVNIREL--ACLSEGCTGADISLICREAAIS 994
             R +P  S                        + EL  +   +G +GAD++ + REA + 
Sbjct: 665  TRTVPLGSLKHDDIAEGRIGGIRGGNENVKAQLMELVKSAKCDGYSGADLAALVREAGVF 724

Query: 995  AIEENLDA 1002
            A+   L A
Sbjct: 725  ALRRTLGA 732



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 128/232 (55%), Gaps = 6/232 (2%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +  D+GG      +++E V  P  H E +   G +PP G+L+ GPPGC KTL+A A+
Sbjct: 117 PSARLSDLGGVETCVEKMLELVAMPLCHPEVYLHTGVQPPRGVLLHGPPGCGKTLLANAM 176

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E G+ F+ +  P + S   GESEK +R  F +A+  AP ++F DEID +   R  ES 
Sbjct: 177 AGELGIPFINISAPSIVSGMSGESEKTLRDTFEEAKRVAPCLLFIDEIDAITPKR--ESA 234

Query: 890 GVSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              +  R+++Q L  +D +    N    V VI ATNRPD +D AL R GRFD  + +G P
Sbjct: 235 QREMERRIVAQFLTCMDDMSWEKNDNKPVIVIGATNRPDSLDAALRRAGRFDHEISMGVP 294

Query: 946 NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           ++  R +I R+   K+  S D +    A  + G  GAD++ +   A I A++
Sbjct: 295 DDEARAKILRVLCAKLRLSGDFDFLAFAKATPGYVGADLAALTGAAGIIAVK 346



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 128/230 (55%), Gaps = 36/230 (15%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+    GVLL GPPG GKT LA+  A++S  N  +V GPE++++  GESE+A+ +VF  
Sbjct: 513 VGITAACGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFSR 572

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A  S+P V+F DELDA+ P R D   E S R+V TLL  +DG+    GV VIAATNRPD 
Sbjct: 573 ARASSPCVIFFDELDALVPRRDDSLSESSARVVNTLLTELDGLDSRKGVYVIAATNRPDI 632

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL-----LSGMEHSLL 613
           I+PA+ RPGRLD+ + +D+              P   +R EI+  +     L  ++H  +
Sbjct: 633 IDPAMVRPGRLDKLLYVDL--------------PGGDERAEIIGTMTRTVPLGSLKHDDI 678

Query: 614 -------------DSEVEYLSMAT----HGFVGADLAALCNEAALVCLRR 646
                        + + + + +       G+ GADLAAL  EA +  LRR
Sbjct: 679 AEGRIGGIRGGNENVKAQLMELVKSAKCDGYSGADLAALVREAGVFALRR 728


>gi|193713874|ref|XP_001948376.1| PREDICTED: nuclear valosin-containing protein-like [Acyrthosiphon
            pisum]
          Length = 792

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 225/598 (37%), Positives = 329/598 (55%), Gaps = 76/598 (12%)

Query: 438  SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
            +LG+ P KG LLHGPPG GKT LA+  A +  + L ++  P++V    GESE+ + ++F+
Sbjct: 235  TLGVSPPKGFLLHGPPGCGKTLLAQAVAGELKIPLISIAAPQLVVGISGESEKRVRKLFE 294

Query: 498  SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            +A +SAP V+FIDE+D+I+P R+    ++ +R+VA LL+ +D +     V+VI ATNRPD
Sbjct: 295  TAVKSAPCVLFIDEVDSISPHRETTSRDMERRIVAQLLSSLDNLKDDAKVIVIGATNRPD 354

Query: 558  SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            S++PALRR GR DRE+ +               +P    R  +L  +   +    +D  V
Sbjct: 355  SLDPALRRAGRFDREVCL--------------GIPDRQSRRAMLGLMCKNLR---IDPTV 397

Query: 618  --EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
              + LS  T G+VGADL +L  EAA V   R   I+     L               ++ 
Sbjct: 398  SLDRLSELTPGYVGADLKSLTREAATVAANR--TIEAIKKRLQ--------------VIS 441

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
            D D                     D    LLSS+       ++I +      SDS     
Sbjct: 442  DGD-------------------KPDETEQLLSSN------KNQIKNTLKLLRSDS---FI 473

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
              E+   +++EL DFE+A  KV PS+ RE  + VP V W+D+G  ++++ +L  A+  P 
Sbjct: 474  PIEEVSDIQIELYDFEEALKKVVPSSKREGFVTVPNVTWDDIGSLKKIREELHMAMLAPV 533

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
             H + F  +G   PTG+L+ GPPGC KTL+A+AVA+EAG+NF+++KGPEL + +VGESE+
Sbjct: 534  THAKEFTALGLDVPTGVLLCGPPGCGKTLLAKAVANEAGINFISIKGPELLNMYVGESER 593

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLH--QRVN 913
             VR +F +AR + P +IFFDEID L   R           RV++QLL E+DG    +   
Sbjct: 594  GVRQVFQRARNSQPCVIFFDEIDALCPKRSDMDANGRSGQRVVNQLLTEMDGFEGGRSGG 653

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFR--IHLRKIPCSSDVNIRE 971
            V V+ ATNRPD IDPA+LRPGR D++LYVG P+E  R +I R     RK P  +D    E
Sbjct: 654  VFVMGATNRPDMIDPAVLRPGRLDKVLYVGLPDEEGRVDILRAVTKNRKRPVLADDVDLE 713

Query: 972  LACLSEGC---TGADISLICREAAISAIEENLDASRITMQ------HLKTAIRHVQPS 1020
                +E C   TGAD++ + REA I  ++E + ++ +  Q      H   A+   +PS
Sbjct: 714  AIGKNEKCSYFTGADLAALVREAGILCLQEFISSNEVNKQLAIQSKHFDEAMTKTRPS 771



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 2/213 (0%)

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            KH E +K +G  PP G L+ GPPGC KTL+A+AVA E  +  +++  P+L     GESEK
Sbjct: 228  KHPEVYKTLGVSPPKGFLLHGPPGCGKTLLAQAVAGELKIPLISIAAPQLVVGISGESEK 287

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
             VR LF  A  +AP ++F DE+D ++  R  E+    +  R+++QLL  LD L     V 
Sbjct: 288  RVRKLFETAVKSAPCVLFIDEVDSISPHR--ETTSRDMERRIVAQLLSSLDNLKDDAKVI 345

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL 975
            VI ATNRPD +DPAL R GRFDR + +G P+   R  +  +  + +     V++  L+ L
Sbjct: 346  VIGATNRPDSLDPALRRAGRFDREVCLGIPDRQSRRAMLGLMCKNLRIDPTVSLDRLSEL 405

Query: 976  SEGCTGADISLICREAAISAIEENLDASRITMQ 1008
            + G  GAD+  + REAA  A    ++A +  +Q
Sbjct: 406  TPGYVGADLKSLTREAATVAANRTIEAIKKRLQ 438



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 127/220 (57%), Gaps = 22/220 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            ++LGL    GVLL GPPG GKT LA+  A+++G+N  ++ GPE+++   GESE+ + +V
Sbjct: 539 FTALGLDVPTGVLLCGPPGCGKTLLAKAVANEAGINFISIKGPELLNMYVGESERGVRQV 598

Query: 496 FDSASQSAPAVVFIDELDAIAPARK--DGGEELSQRMVATLLNLMDGV--CRTDGVLVIA 551
           F  A  S P V+F DE+DA+ P R   D      QR+V  LL  MDG    R+ GV V+ 
Sbjct: 599 FQRARNSQPCVIFFDEIDALCPKRSDMDANGRSGQRVVNQLLTEMDGFEGGRSGGVFVMG 658

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PA+ RPGRLD+ + +               +P    R++IL A+    +  
Sbjct: 659 ATNRPDMIDPAVLRPGRLDKVLYV--------------GLPDEEGRVDILRAVTKNRKRP 704

Query: 612 LLDSEVEYLSMATHG----FVGADLAALCNEAALVCLRRY 647
           +L  +V+  ++  +     F GADLAAL  EA ++CL+ +
Sbjct: 705 VLADDVDLEAIGKNEKCSYFTGADLAALVREAGILCLQEF 744


>gi|70982275|ref|XP_746666.1| AAA family ATPase [Aspergillus fumigatus Af293]
 gi|66844289|gb|EAL84628.1| AAA family ATPase, putative [Aspergillus fumigatus Af293]
          Length = 759

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 237/637 (37%), Positives = 339/637 (53%), Gaps = 91/637 (14%)

Query: 411  SKLGGLSKEYAILKDIIISSSV--KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            S LGGLS++   + + +   S+  K  + S     ++G+LL+GP GTGK++L        
Sbjct: 206  SGLGGLSRQIDSINESLADFSLGQKFRMPSF-YEHSRGILLYGPKGTGKSALLHQIQAAG 264

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
                F++ G  + S+N  +SE  +  VF  A +  P+ + ID+LD IAP R       SQ
Sbjct: 265  WKKTFSL-GSSMFSRNISDSETKVRNVFQEAVRCQPSAIIIDQLDFIAPKRASLD---SQ 320

Query: 529  RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
             + + L   +D + ++  VLV+AAT  P+ ++ ALR P RL  EIE+             
Sbjct: 321  SLTSVLCECLD-MAKSALVLVVAATRHPNDVDDALRTPHRLAIEIEMQ------------ 367

Query: 589  AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
              VP+   R EIL A+       L +  +E ++  THG+VGADL AL     LVC R+  
Sbjct: 368  --VPTAQDRAEILRAICGSSTRQLSEELIETIAEKTHGYVGADLFALLQ---LVC-RKAR 421

Query: 649  KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSS 708
            + Q               + HS T L D                             ++S
Sbjct: 422  QRQLC-------------QSHSPTRLCD-----------------------------VTS 439

Query: 709  SLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
            S  L   V  I +N    V D             L +E  D   A  + RP+AMREV LE
Sbjct: 440  SPDLVAGVEHIEENM---VVD-------------LDIEESDVMSALQETRPTAMREVFLE 483

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
             PKV+W D+GGQ ++K +L +AVE P K  E  KR+  +   GIL++GPPGCSKTLM +A
Sbjct: 484  TPKVRWTDIGGQHDIKKRLQKAVERPLKFPERMKRLNVKSKKGILLYGPPGCSKTLMVKA 543

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+EAGLNFLAVKG E+ S +VGESE+A+R +F KAR+  PSIIFFDEID +A+ R    
Sbjct: 544  LATEAGLNFLAVKGAEILSMYVGESERALREIFRKARSARPSIIFFDEIDAIASRRNSSH 603

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             GV+    V++ LL E+DG+ +  NV VIAATN+PD IDPAL+RPGR D +LY+G P+  
Sbjct: 604  GGVN----VLTTLLNEMDGIEELKNVLVIAATNKPDVIDPALMRPGRLDNILYIGLPDFD 659

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR---I 1005
             R+EI  I  RK     +V++ ELA L+ G +GA+I  IC  A  +A++E  +  +   +
Sbjct: 660  ARKEILNIWFRKSVVHPEVDLEELAELTHGYSGAEIVSICETAGDAALDEEEETGQEQDV 719

Query: 1006 TMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEA 1042
              +H K A+  VQ     + +E   ++ + V S   A
Sbjct: 720  RWEHFKYALEQVQRQITDAVREEYERWGKSVKSECHA 756


>gi|159122098|gb|EDP47220.1| AAA family ATPase, putative [Aspergillus fumigatus A1163]
          Length = 759

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 237/637 (37%), Positives = 339/637 (53%), Gaps = 91/637 (14%)

Query: 411  SKLGGLSKEYAILKDIIISSSV--KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            S LGGLS++   + + +   S+  K  + S     ++G+LL+GP GTGK++L        
Sbjct: 206  SGLGGLSRQIDSINESLADFSLGQKFRMPSF-YEHSRGILLYGPKGTGKSALLHQIQAAG 264

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
                F++ G  + S+N  +SE  +  VF  A +  P+ + ID+LD IAP R       SQ
Sbjct: 265  WKKTFSL-GSSMFSRNISDSETKVRNVFQEAVRCQPSAIIIDQLDFIAPKRASLD---SQ 320

Query: 529  RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
             + + L   +D + ++  VLV+AAT  P+ ++ ALR P RL  EIE+             
Sbjct: 321  SLTSVLCECLD-MAKSALVLVVAATRHPNDVDDALRTPHRLAIEIEMQ------------ 367

Query: 589  AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
              VP+   R EIL A+       L +  +E ++  THG+VGADL AL     LVC R+  
Sbjct: 368  --VPTAQDRAEILRAICGSSTRQLSEELIETIAEKTHGYVGADLFALLQ---LVC-RKAR 421

Query: 649  KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSS 708
            + Q               + HS T L D                             ++S
Sbjct: 422  QRQLC-------------QSHSPTRLCD-----------------------------VTS 439

Query: 709  SLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
            S  L   V  I +N    V D             L +E  D   A  + RP+AMREV LE
Sbjct: 440  SPDLVAGVEHIEENM---VVD-------------LDIEESDVMSALQETRPTAMREVFLE 483

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
             PKV+W D+GGQ ++K +L +AVE P K  E  KR+  +   GIL++GPPGCSKTLM +A
Sbjct: 484  TPKVRWTDIGGQHDIKKRLQKAVERPLKFPERMKRLNVKSKKGILLYGPPGCSKTLMVKA 543

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+EAGLNFLAVKG E+ S +VGESE+A+R +F KAR+  PSIIFFDEID +A+ R    
Sbjct: 544  LATEAGLNFLAVKGAEILSMYVGESERALREIFRKARSARPSIIFFDEIDAIASRRNSSH 603

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             GV+    V++ LL E+DG+ +  NV VIAATN+PD IDPAL+RPGR D +LY+G P+  
Sbjct: 604  GGVN----VLTTLLNEMDGIEELKNVLVIAATNKPDVIDPALMRPGRLDNILYIGLPDFD 659

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR---I 1005
             R+EI  I  RK     +V++ ELA L+ G +GA+I  IC  A  +A++E  +  +   +
Sbjct: 660  ARKEILNIWFRKSVVHPEVDLEELAELTHGYSGAEIVSICETAGDAALDEEEETGQEQDV 719

Query: 1006 TMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEA 1042
              +H K A+  VQ     + +E   ++ + V S   A
Sbjct: 720  RWEHFKYALEQVQRQITDAVREEYERWGKSVKSECHA 756


>gi|149641609|ref|XP_001512479.1| PREDICTED: nuclear VCP-like [Ornithorhynchus anatinus]
          Length = 677

 Score =  358 bits (920), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 327/591 (55%), Gaps = 62/591 (10%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +G LLHGPPG GKT LA+  A +  + +  +   E+VS   GESEQ L E+F+ 
Sbjct: 111  LGVVPPRGFLLHGPPGCGKTLLAQAIAGELDLPILKIAATEIVSGVSGESEQKLRELFEQ 170

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  SAP ++FIDE+DAI P R+   +++ +R+VA LL  MD    +  T  VLVI ATNR
Sbjct: 171  AVSSAPCILFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNSLAATAQVLVIGATNR 230

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   +   L  S
Sbjct: 231  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILQTLCRKLR--LPQS 274

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
             +  +L+  T G+VGAD         L+ L R + +   + VL + G   E +G     L
Sbjct: 275  FDFHHLAHQTPGYVGAD---------LMALCREAAMCAVNRVLINLG---EQKGQH---L 319

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
            Q                   S C  D    + +     +  +S         + + S   
Sbjct: 320  QAG----------------GSSCEGDQAALMETEEGVKKAELSGELQKLLELLKEQSP-- 361

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
             + E+   L +E+ DF  A   V+PSA RE  + VP V W D+G   +++ +L  A+  P
Sbjct: 362  LLEEQLQMLCIEMNDFTVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAP 421

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
             ++ E FK +G   P GIL+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE
Sbjct: 422  VRNPEQFKALGLLAPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 481

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNV 914
            +AVR +F +AR +AP +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V
Sbjct: 482  RAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGASV--RVVNQLLTEMDGLETRQQV 539

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRE 971
             ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  I R   +   + P   DV++ E
Sbjct: 540  FIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRFAILRTITKYGTRPPLDIDVSLEE 599

Query: 972  LAC--LSEGCTGADISLICREAAISAIEENLDASRI--TMQHLKTAIRHVQ 1018
            +A     +  TGAD+S + REA++ A+++ + + +       +K   +H Q
Sbjct: 600  IAYDPRCDCYTGADLSALIREASVCALKQEMASQKSGNVKGEIKIGQKHFQ 650



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/255 (39%), Positives = 142/255 (55%), Gaps = 15/255 (5%)

Query: 767  LEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            L++  +K+EDVGG     +EV   L+       +H E +  +G  PP G L+ GPPGC K
Sbjct: 75   LQISALKFEDVGGNDATLKEVCKMLIH-----MRHPEVYHHLGVVPPRGFLLHGPPGCGK 129

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL+A+A+A E  L  L +   E+ S   GESE+ +R LF +A ++AP I+F DEID +  
Sbjct: 130  TLLAQAIAGELDLPILKIAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITP 189

Query: 883  IRGKESDGVSVSDRVMSQLLV---ELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
             R  E     +  R+++QLL    +L+ L     V VI ATNRPD +DPAL R GRFDR 
Sbjct: 190  KR--EVASKDMERRIVAQLLTCMDDLNSLAATAQVLVIGATNRPDSLDPALRRAGRFDRE 247

Query: 940  LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN 999
            + +G P+E  RE I +   RK+      +   LA  + G  GAD+  +CREAA+ A+   
Sbjct: 248  ICLGIPDEASRERILQTLCRKLRLPQSFDFHHLAHQTPGYVGADLMALCREAAMCAVNRV 307

Query: 1000 L-DASRITMQHLKTA 1013
            L +      QHL+  
Sbjct: 308  LINLGEQKGQHLQAG 322



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 142/269 (52%), Gaps = 21/269 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A+ E F  V      DI  L  + +E  +   I+          +LGL    G+LL G
Sbjct: 386 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPEQFKALGLLAPAGILLAG 443

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F DE
Sbjct: 444 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDE 503

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DA+ P R D     S R+V  LL  MDG+     V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 504 VDALCPRRSDRESGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDK 563

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGF 627
            + +               +P PA R  IL  +        LD +V    +A       +
Sbjct: 564 TLFV--------------GLPPPADRFAILRTITKYGTRPPLDIDVSLEEIAYDPRCDCY 609

Query: 628 VGADLAALCNEAALVCLRRYSKIQTSSDV 656
            GADL+AL  EA++  L++    Q S +V
Sbjct: 610 TGADLSALIREASVCALKQEMASQKSGNV 638


>gi|425777725|gb|EKV15881.1| AAA family ATPase, putative [Penicillium digitatum PHI26]
 gi|425782707|gb|EKV20603.1| AAA family ATPase, putative [Penicillium digitatum Pd1]
          Length = 751

 Score =  358 bits (919), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 229/626 (36%), Positives = 332/626 (53%), Gaps = 99/626 (15%)

Query: 413  LGGLSKEYAILKDIIISSSV---KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            LGGLS++   + + +   ++   K  + S     ++G+LL+GP GTGKTSL         
Sbjct: 208  LGGLSRQIEDINESLSDFNIDLRKPMMPSF-YENSRGILLYGPKGTGKTSLLEQIEKAGW 266

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
               F V G  ++ +N  E E  L  +F  A++S P+V+ ID+L+ IAP R       SQ 
Sbjct: 267  KQTFRV-GMSILGRNINEGEVKLRNIFQEAARSKPSVIIIDQLEFIAPKRTSIE---SQS 322

Query: 530  MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
            + + L   +D + R   ++V+AAT  P+ ++ ALR P RL  EIEI              
Sbjct: 323  LASVLCENLDAI-RNTSIIVVAATRHPNQVDDALRTPHRLGTEIEIH------------- 368

Query: 590  AVPSPAQRLEILHALLSGMEHS--LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
             VP+   R EILHA+   +  +  L D  VE L+  THG+VGADL AL     LVC +  
Sbjct: 369  -VPTAQDRAEILHAIRGPVSAAAGLTDELVELLAEKTHGYVGADLFALLQ---LVCRK-- 422

Query: 648  SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLS 707
                                                    R  L+  S   S  P    S
Sbjct: 423  -------------------------------------ARQRQLLEQNSIAKSATPIDPYS 445

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
                           +H G S         E   +L+++  D   +  ++RP+AMREV L
Sbjct: 446  ---------------WHQGGSSD------DESAISLEIQEADILLSLQEIRPTAMREVFL 484

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E PKV+W D+GGQ ++K +L +AVE P K+ +  +R+      G+L++GPPGCSKTL  +
Sbjct: 485  ETPKVRWSDIGGQHDIKKRLQQAVERPLKYPQRMRRLNVNSKKGVLLYGPPGCSKTLTVK 544

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            A+A+EAGLNFLAVKG E+ S +VGESE+++R +F KARA  PSIIFFDEID +AA R   
Sbjct: 545  ALATEAGLNFLAVKGAEILSMYVGESERSLREIFRKARAARPSIIFFDEIDAIAARRSSS 604

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            S GV+    V++ LL E+DG+ +  NV VIAATN+PD +DPAL+RPGR D +LY+GPP+ 
Sbjct: 605  SGGVN----VLTTLLNEMDGIEELRNVLVIAATNKPDVLDPALMRPGRLDNILYIGPPDF 660

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR--- 1004
              R EI RI   K   + +V++  LA L+EG +GA+I  IC  A  +A++E  +  +   
Sbjct: 661  EARREILRIWADKSVVNPEVDLDNLASLTEGYSGAEIVSICETAGDAALDEEEETQQEQD 720

Query: 1005 ITMQHLKTAI----RHVQPSEIHSYK 1026
            +  +H + A+    R +  + I  Y+
Sbjct: 721  VQWKHFEYALGQVRRQITETVIQEYE 746


>gi|440632697|gb|ELR02616.1| hypothetical protein GMDG_05579 [Geomyces destructans 20631-21]
          Length = 784

 Score =  357 bits (917), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 237/651 (36%), Positives = 359/651 (55%), Gaps = 62/651 (9%)

Query: 400  QNVQATVEQDIS--KLGGLSKEYAILKDIIISSSV-KSTLSSLGLRPTKGVLLHGPPGTG 456
            + V  T   DIS   LGG+      L +++    +   T    G++P +GVLLHGPPG G
Sbjct: 175  KEVDRTPPADISLANLGGVDAVIEELNELVAMPMLYPETYLRTGIQPPRGVLLHGPPGCG 234

Query: 457  KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
            KT +A   A + GV+   ++ P +V+   GESE+ + E+FD A + AP +VFIDE+D I 
Sbjct: 235  KTMIANAFASEIGVSFIPISAPSLVAGMSGESEKKIREIFDEAKKMAPCLVFIDEIDVIM 294

Query: 517  PARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDRE 572
              R+    E+ +R+VA +L  MD +   +TDG  V++IAATNRPDSI+PALRR GR ++E
Sbjct: 295  GKRESAQREMEKRIVAQMLTCMDDMALEKTDGKPVIIIAATNRPDSIDPALRRAGRFNKE 354

Query: 573  IEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGA 630
            I +               VP+ A R +IL AL   +   +L  E ++L +A  T GFVGA
Sbjct: 355  INL--------------GVPNEASREKILRALTQKL---MLPDEFDFLKLAKMTPGFVGA 397

Query: 631  DLAALCNEAALVCLRRYSKI--QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSR 688
            DL  + + A    ++R      Q   D   +  T       +D M  DS  +   T ++ 
Sbjct: 398  DLNDVVSVAGTEAMKRMMTALKQRVVDTPLTPPTAL----TTDVMEIDSILTAASTSAT- 452

Query: 689  DCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELV 748
                  +  ++DL       S PLR   S +    H G +   G   ++           
Sbjct: 453  ------TTTSTDLTAHPTPLSAPLRLLRSLVK---HAGETPPDGDFSIT---------YS 494

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  KV+PSA RE    +P   W  +G    V+ QL  A+  P +   AF R+G   
Sbjct: 495  DFLAAIPKVQPSARREGFATIPDTTWAHIGALHTVREQLTMAIIEPIRRPAAFARVGITA 554

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            PTG+L++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F +AR++ 
Sbjct: 555  PTGVLLWGPPGCGKTLLAKAVANESKANFISIKGPELLNKYVGESERAVRQVFERARSSV 614

Query: 869  PSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            P I+FFDE+D L     K  D +S  S +V++ LL ELDGL  R  + V+AATNRPD ID
Sbjct: 615  PCILFFDELDALVP---KREDSLSEASSKVVNTLLTELDGLSSRAGIYVVAATNRPDMID 671

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFR-IHLRKIPCSSDVNIRELA--CLSEGCTGADI 984
            PA+LRPGR    +++  PN  +R EI R ++ + +P +    + E+A    +EG +GAD+
Sbjct: 672  PAMLRPGRLGTSVFIDLPNADERVEILRALYAKALPGAVMEGLEEVARDGRAEGYSGADL 731

Query: 985  SLICREAAISAIEENLDASRITMQHL--KTAIRHVQPS--EIHSYKELSAK 1031
              + + AA++A+  +  +  + ++ +  + A+  V+PS  +   Y+ L  +
Sbjct: 732  GNLHQAAAVAALRRDGGSEEVRIERVDWEVALGSVKPSVKDAGKYRRLKER 782


>gi|156089603|ref|XP_001612208.1| ATPase, AAA family protein [Babesia bovis]
 gi|154799462|gb|EDO08640.1| ATPase, AAA family protein [Babesia bovis]
          Length = 893

 Score =  357 bits (915), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 219/626 (34%), Positives = 336/626 (53%), Gaps = 107/626 (17%)

Query: 411  SKLGGLSKEYAILKDIIISSSV-KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAH--- 466
            +K+ GLS     L   ++   V K     LG+ P +GVLL+GPPG GKTS+A+   +   
Sbjct: 251  TKIAGLSTVLNKLMKYVVHPLVFKDEYKKLGIAPPRGVLLYGPPGCGKTSIAKAMKNNMK 310

Query: 467  -------DSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA---PAVVFIDELDAIA 516
                   D  V++  +   ++ +  YG +   +  +F+  ++ A   P + FIDE++ + 
Sbjct: 311  QLSGFKDDHEVHVMLIQSSDLFNHEYGPTASNIAIIFEQCAKIAKRCPCICFIDEIEILC 370

Query: 517  PARKDGGEELSQRMVATLLNLMDGVC-------RTDGVLVIAATNRPDSIEPALRRPGRL 569
              +K  G      ++A  LN MDG            G ++I  TN  DSI+ ALRRPGR 
Sbjct: 371  --KKRSGYNTGNGILAAFLNYMDGFKLPSNSEENDHGFVIIGCTNTIDSIDQALRRPGRF 428

Query: 570  DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 629
            D E+E+               VP+   R  IL  LL   +H++ D ++  +S    GFVG
Sbjct: 429  DLEVEV--------------GVPNADDRYSILRTLLGETKHNISDKQLRDISDRCSGFVG 474

Query: 630  ADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 689
            ADL  L   AA     R  KI              E  G+S   + D D  +N       
Sbjct: 475  ADLKQLVTSAAWA---RIDKINQ------------EMRGNS---IDDIDILKN------- 509

Query: 690  CLDSASPCTS--DLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLEL 747
              DS +P     D+P                  D F                     +++
Sbjct: 510  -RDSNAPFVEKMDIP-----------------EDAF---------------------IDV 530

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
             D ++A    +PSA+RE+ +EVP VKW+D+GG  + K  + E VE+P  + + +K++  +
Sbjct: 531  DDLKRALTITKPSALRELQIEVPNVKWDDIGGYEDAKRVIKECVEYPIVYADEYKKLQIQ 590

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
             P G+L++GPPGCSKTLMA+AVA+E+ +NF++VKGPE+F+ +VGESE+A+R +F  AR N
Sbjct: 591  APRGVLLYGPPGCSKTLMAKAVATESHMNFISVKGPEIFNMYVGESERAIRKVFKTARTN 650

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            AP +IFFDE+D ++  R + +D   V+ RV+SQLL E+DG+ +   V VI ATNRPD +D
Sbjct: 651  APCVIFFDEMDSISVSR-EHADSTGVTRRVVSQLLNEMDGISELKQVIVIGATNRPDLMD 709

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS--SDVNIRE-LACLSEGCTGADI 984
             ALLRPGR DRL+Y+  P+   R++IF I+L+++P     ++N  E LA  + G +GA+I
Sbjct: 710  SALLRPGRLDRLVYIPLPDLEARKKIFSIYLKRLPTDGFGEMNAAETLAHSTNGYSGAEI 769

Query: 985  SLICREAAISAIEENLDASRITMQHL 1010
            +LICRE+A++A+ E ++  + ++  L
Sbjct: 770  ALICRESAMNALRETINRKQASVNTL 795



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 171/331 (51%), Gaps = 41/331 (12%)

Query: 346 LTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSK--SLREGTLPNAQIEFQNVQ 403
           L N  S     E MD   +AF+   + K  L      ++K  +LRE      QIE  NV+
Sbjct: 507 LKNRDSNAPFVEKMDIPEDAFIDVDDLKRAL-----TITKPSALRE-----LQIEVPNVK 556

Query: 404 ATVEQDISKLGGLSKEYAILKDIIISSSVKST-LSSLGLRPTKGVLLHGPPGTGKTSLAR 462
                    +GG      ++K+ +    V +     L ++  +GVLL+GPPG  KT +A+
Sbjct: 557 W------DDIGGYEDAKRVIKECVEYPIVYADEYKKLQIQAPRGVLLYGPPGCSKTLMAK 610

Query: 463 LCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG 522
             A +S +N  +V GPE+ +   GESE+A+ +VF +A  +AP V+F DE+D+I+ +R+  
Sbjct: 611 AVATESHMNFISVKGPEIFNMYVGESERAIRKVFKTARTNAPCVIFFDEMDSISVSREHA 670

Query: 523 GEE-LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
               +++R+V+ LLN MDG+     V+VI ATNRPD ++ AL RPGRLDR + I      
Sbjct: 671 DSTGVTRRVVSQLLNEMDGISELKQVIVIGATNRPDLMDSALLRPGRLDRLVYI------ 724

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD--SEVEYLSMATHGFVGADLAALCNEA 639
                    +P    R +I    L  +        +  E L+ +T+G+ GA++A +C E+
Sbjct: 725 --------PLPDLEARKKIFSIYLKRLPTDGFGEMNAAETLAHSTNGYSGAEIALICRES 776

Query: 640 ALVCL-----RRYSKIQTSSDVLHSTGTLFE 665
           A+  L     R+ + + T S ++ ST  + E
Sbjct: 777 AMNALRETINRKQASVNTLSPIVESTDCIKE 807



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 25/250 (10%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  +   + G   V  +LM+ V  P   ++ +K++G  PP G+L++GPPGC KT +A+A+
Sbjct: 246 PSPRETKIAGLSTVLNKLMKYVVHPLVFKDEYKKLGIAPPRGVLLYGPPGCGKTSIAKAM 305

Query: 830 AS----------EAGLNFLAVKGPELFSKWVGESEKAVRSLF---AKARANAPSIIFFDE 876
            +          +  ++ + ++  +LF+   G +   +  +F   AK     P I F DE
Sbjct: 306 KNNMKQLSGFKDDHEVHVMLIQSSDLFNHEYGPTASNIAIIFEQCAKIAKRCPCICFIDE 365

Query: 877 IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN-------VTVIAATNRPDKIDPA 929
           I+ L     K+  G +  + +++  L  +DG     N         +I  TN  D ID A
Sbjct: 366 IEILC----KKRSGYNTGNGILAAFLNYMDGFKLPSNSEENDHGFVIIGCTNTIDSIDQA 421

Query: 930 LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLIC 988
           L RPGRFD  + VG PN  DR  I R  L +   + SD  +R+++    G  GAD+  + 
Sbjct: 422 LRRPGRFDLEVEVGVPNADDRYSILRTLLGETKHNISDKQLRDISDRCSGFVGADLKQLV 481

Query: 989 REAAISAIEE 998
             AA + I++
Sbjct: 482 TSAAWARIDK 491


>gi|196015676|ref|XP_002117694.1| hypothetical protein TRIADDRAFT_61745 [Trichoplax adhaerens]
 gi|190579734|gb|EDV19824.1| hypothetical protein TRIADDRAFT_61745 [Trichoplax adhaerens]
          Length = 736

 Score =  356 bits (914), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 164/277 (59%), Positives = 214/277 (77%), Gaps = 2/277 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            + L+  DF  A  K++PSAMREV +EVPKV W D+GGQ+E+K +L E+VEWP KH   F+
Sbjct: 440  ISLQPSDFLSAITKIKPSAMREVAVEVPKVLWTDIGGQQEIKQRLKESVEWPIKHPSTFR 499

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP GIL++GPPGCSKT++A+A+A+E+GLNFLAVKGPELF+KWVGESEKAVR LF 
Sbjct: 500  RLGVKPPKGILLYGPPGCSKTMIAKALATESGLNFLAVKGPELFNKWVGESEKAVRELFR 559

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID LAA RG  SDG  V DRV++QLL ELDG+ Q  +VT++AATNR
Sbjct: 560  KARAASPSIIFFDEIDALAAQRG--SDGAGVGDRVLTQLLTELDGIEQLEDVTIVAATNR 617

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            P+ ID ALLRPGR DR+LYV  P+   R EI +I  R+IP + DV+I  L   +EG +GA
Sbjct: 618  PEMIDKALLRPGRIDRILYVPLPDSETRHEILKIQFRRIPVNDDVDIEYLTLKTEGFSGA 677

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            +++L+C+EAA +A++EN++  R+  QH   A+  V P
Sbjct: 678  EVALLCQEAAFAALQENIECERVCRQHFINALNMVVP 714



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 128/212 (60%), Gaps = 15/212 (7%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           ST   LG++P KG+LL+GPPG  KT +A+  A +SG+N   V GPE+ ++  GESE+A+ 
Sbjct: 496 STFRRLGVKPPKGILLYGPPGCSKTMIAKALATESGLNFLAVKGPELFNKWVGESEKAVR 555

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           E+F  A  ++P+++F DE+DA+A  R   G  +  R++  LL  +DG+ + + V ++AAT
Sbjct: 556 ELFRKARAASPSIIFFDEIDALAAQRGSDGAGVGDRVLTQLLTELDGIEQLEDVTIVAAT 615

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRP+ I+ AL RPGR+DR + + +              P    R EIL      +  +  
Sbjct: 616 NRPEMIDKALLRPGRIDRILYVPL--------------PDSETRHEILKIQFRRIPVN-D 660

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D ++EYL++ T GF GA++A LC EAA   L+
Sbjct: 661 DVDIEYLTLKTEGFSGAEVALLCQEAAFAALQ 692



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 19/185 (10%)

Query: 410 ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +++GGL K+  ++K+I+  +++     SSLG+    G+LLHGP G GKT +A   A++S
Sbjct: 239 FNEVGGLKKQIRMIKEIMDFTTISGDHGSSLGI--MNGILLHGPSGVGKTLVAEAAANES 296

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ-------------SAPAVVFIDELDAI 515
           G   F +NGPE+ S+ YGESE  L  +FD A                AP+++ +DELD I
Sbjct: 297 GKTSFHINGPEIFSRLYGESEAKLRRIFDDAVHRALITAVSWPFRNRAPSIIIVDELDTI 356

Query: 516 APARKDGGEELSQRMVATLLNLMDGVCRTDG---VLVIAATNRPDSIEPALRRPGRLDRE 572
            P R     E+ +R+VAT  +L+D + ++ G   V+VIA+TNR D+I+ ALRRPGR DRE
Sbjct: 357 CPKRSYTQNEVEKRIVATFASLLDRISKSSGSERVVVIASTNRIDAIDTALRRPGRFDRE 416

Query: 573 IEIDM 577
           IEI +
Sbjct: 417 IEISI 421



 Score =  103 bits (258), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 20/197 (10%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V + +VGG ++    + E +++     +    +G     GIL+ GP G  KTL+A A A+
Sbjct: 237 VTFNEVGGLKKQIRMIKEIMDFTTISGDHGSSLGIM--NGILLHGPSGVGKTLVAEAAAN 294

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA-------------RANAPSIIFFDEID 878
           E+G     + GPE+FS+  GESE  +R +F  A             R  APSII  DE+D
Sbjct: 295 ESGKTSFHINGPEIFSRLYGESEAKLRRIFDDAVHRALITAVSWPFRNRAPSIIIVDELD 354

Query: 879 GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGR 935
            +   R    +   V  R+++     LD + +      V VIA+TNR D ID AL RPGR
Sbjct: 355 TICPKRSYTQN--EVEKRIVATFASLLDRISKSSGSERVVVIASTNRIDAIDTALRRPGR 412

Query: 936 FDRLLYVGPPNETDREE 952
           FDR + +  P+  DR+E
Sbjct: 413 FDREIEISIPSIDDRKE 429


>gi|328850881|gb|EGG00041.1| AAA ATPase [Melampsora larici-populina 98AG31]
          Length = 745

 Score =  355 bits (912), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 226/601 (37%), Positives = 340/601 (56%), Gaps = 48/601 (7%)

Query: 410  ISKLGGL-SKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGG+ S    IL+ I +           GL+P +G+LL GPPG GKT LA   ++  
Sbjct: 104  LSDLGGIDSTVEKILELIALPILHPEIFEFAGLKPIRGLLLCGPPGCGKTMLASAISNQL 163

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            G+ L  V+   +VS   GESE+A+ ++FD A++ AP ++FIDE+DAI P R+    E+ +
Sbjct: 164  GITLINVSSTSIVSGMSGESEKAIRDIFDQATKQAPCLLFIDEIDAITPKRETAQREMER 223

Query: 529  RMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL  +D +   +TDG  V+VI ATNRPDS++PALRR GR D EI +         
Sbjct: 224  RIVAQLLTCLDDLSLEKTDGKPVIVIGATNRPDSLDPALRRGGRFDHEILM--------- 274

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVC 643
                  VP    R +IL  L   ++  L+++ + + L+ AT G+VGADL AL   A ++ 
Sbjct: 275  -----GVPDERAREQILRVLCEKLK--LVEAFDFKKLARATPGYVGADLTALTASAGVIA 327

Query: 644  LRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPT 703
            ++R    +TS D    T  + E E     ++ +++  +           S+S    +LP 
Sbjct: 328  IKRI--FETSMDT-EDTVMIDEQEALDGDVIPETEGIQIEPTPQNPAPSSSSDPFGNLPE 384

Query: 704  SLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMR 763
            +LLS  LP+   ++ +  N      D    + +S+          DF +A    +PS  R
Sbjct: 385  NLLS--LPI---INFLRKNPQKLTPDQLERIRISQ---------TDFHQALKDFQPSCKR 430

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E    +P   W  +G  + V+ +L  ++  P +  E F+++G     GIL++GPPGC KT
Sbjct: 431  EGFSTIPDTTWSQIGAMKSVRDELNISIIQPIRFPEMFEKLGIASSFGILLWGPPGCGKT 490

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+AVA+E+  NF++VKGPEL +K+VGESEKAVR +F +ARA+AP IIFFDE+D L   
Sbjct: 491  LLAKAVANESQANFISVKGPELLNKYVGESEKAVRQVFVRARASAPCIIFFDELDALVPR 550

Query: 884  RGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
            R    D +S  S RV++ LL ELDGL  R  + VI ATNRPD +DPA++RPGR D++++V
Sbjct: 551  R---DDSLSESSSRVVNTLLTELDGLESRKQIFVIGATNRPDVMDPAMVRPGRLDKMIFV 607

Query: 943  GPPNETDREEIFRI---HLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN 999
              P+  +R EIF     HLR         + +  C   G +GAD+  + REA++  + + 
Sbjct: 608  DLPDPIERWEIFSTLSHHLRIQEIDQIKVLVKEKC--NGYSGADVGALIREASLIGLRQR 665

Query: 1000 L 1000
            +
Sbjct: 666  I 666



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 132/236 (55%), Gaps = 6/236 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V   D+GG      +++E +  P  H E F+  G +P  G+L+ GPPGC KT++A A+++
Sbjct: 102  VTLSDLGGIDSTVEKILELIALPILHPEIFEFAGLKPIRGLLLCGPPGCGKTMLASAISN 161

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            + G+  + V    + S   GESEKA+R +F +A   AP ++F DEID +   R  E+   
Sbjct: 162  QLGITLINVSSTSIVSGMSGESEKAIRDIFDQATKQAPCLLFIDEIDAITPKR--ETAQR 219

Query: 892  SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++QLL  LD L         V VI ATNRPD +DPAL R GRFD  + +G P+E
Sbjct: 220  EMERRIVAQLLTCLDDLSLEKTDGKPVIVIGATNRPDSLDPALRRGGRFDHEILMGVPDE 279

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
              RE+I R+   K+      + ++LA  + G  GAD++ +   A + AI+   + S
Sbjct: 280  RAREQILRVLCEKLKLVEAFDFKKLARATPGYVGADLTALTASAGVIAIKRIFETS 335


>gi|156368649|ref|XP_001627805.1| predicted protein [Nematostella vectensis]
 gi|156214725|gb|EDO35705.1| predicted protein [Nematostella vectensis]
          Length = 613

 Score =  355 bits (911), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 225/575 (39%), Positives = 326/575 (56%), Gaps = 70/575 (12%)

Query: 436  LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             ++LG+ PT G LLHGPPG GKT LA   A +  +    +   E+VS   GESE+ + E+
Sbjct: 7    FTTLGVTPTTGFLLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESEEKVREL 66

Query: 496  FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG--VLVIAAT 553
            F SA   AP ++F+DE+DAI P R++  +++ +R+V+ LL+ MD +       VLVI AT
Sbjct: 67   FTSAVAQAPCILFLDEIDAITPKRENASKDMERRIVSQLLSCMDDLNNNPDAHVLVIGAT 126

Query: 554  NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
            NRPDS++PALRR GR DREI +               +P  + R  IL  +   ++   L
Sbjct: 127  NRPDSLDPALRRAGRFDREISM--------------GIPDESARASILRVMCKQLK---L 169

Query: 614  DSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSD 671
             ++  +LS++  T G+VGADL AL  EAA++ + R     T   +   T T+       D
Sbjct: 170  SADFSFLSLSRQTPGYVGADLMALTREAAMIAVNR-----TFESLKKDTQTVLS----GD 220

Query: 672  TMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSS 731
             M QDS  S+ +          A+P  S      L    PL                   
Sbjct: 221  DMFQDS-VSKPM----------ATPQDSWNVMEWLRQQPPL------------------- 250

Query: 732  GGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAV 791
                 SE+  +L + + DF  A    +PSA RE    VP V W +VG  ++V+ +L  A+
Sbjct: 251  ----TSEQLSSLCITMDDFVGALAVTQPSAKREGFATVPDVTWANVGALKDVREELTMAI 306

Query: 792  EWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVG 851
              P +H E F  +G   P GIL+ GPPGC KTL+A+A+A+E+G+NF++VKGPEL + +VG
Sbjct: 307  LAPVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVG 366

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            ESE+AVR +F +AR +AP +IFFDE+D L   R   S     S RV++QLL E+DGL  R
Sbjct: 367  ESERAVRQVFQRARNSAPCVIFFDELDSLCPRRSGSS-ESGSSVRVVNQLLTEMDGLQAR 425

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRI---HLRKIPCSSDVN 968
             +V ++ ATNRPD IDPA++RPGR D++LYVG P+  DR++I R      RK     DV+
Sbjct: 426  KHVFIMGATNRPDIIDPAVMRPGRLDKVLYVGLPSAHDRQDILRTLTKEGRKPFLLPDVH 485

Query: 969  IRELA--CLSEGCTGADISLICREAAISAIEENLD 1001
            +  LA      G +GAD++ + REA+++A+ E ++
Sbjct: 486  LGLLAEDTRCNGFSGADLAALVREASMAALRERIN 520



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 126/214 (58%), Gaps = 4/214 (1%)

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            H E F  +G  P TG L+ GPPGC KTL+A A+A E  + FL +   E+ S   GESE+ 
Sbjct: 3    HPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESEEK 62

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR--VNV 914
            VR LF  A A AP I+F DEID +   R  E+    +  R++SQLL  +D L+     +V
Sbjct: 63   VRELFTSAVAQAPCILFLDEIDAITPKR--ENASKDMERRIVSQLLSCMDDLNNNPDAHV 120

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC 974
             VI ATNRPD +DPAL R GRFDR + +G P+E+ R  I R+  +++  S+D +   L+ 
Sbjct: 121  LVIGATNRPDSLDPALRRAGRFDREISMGIPDESARASILRVMCKQLKLSADFSFLSLSR 180

Query: 975  LSEGCTGADISLICREAAISAIEENLDASRITMQ 1008
             + G  GAD+  + REAA+ A+    ++ +   Q
Sbjct: 181  QTPGYVGADLMALTREAAMIAVNRTFESLKKDTQ 214



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 137/261 (52%), Gaps = 22/261 (8%)

Query: 391 TLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLL 449
           T P+A+ E F  V      ++  L  + +E  +   I+         S+LGL    G+LL
Sbjct: 272 TQPSAKREGFATVPDVTWANVGALKDVREELTMA--ILAPVQHPEEFSALGLTHPPGILL 329

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
            GPPG GKT LA+  A++SG+N  +V GPE+++   GESE+A+ +VF  A  SAP V+F 
Sbjct: 330 AGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFF 389

Query: 510 DELDAIAPARKDGGEELSQRMVAT-LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
           DELD++ P R    E  S   V   LL  MDG+     V ++ ATNRPD I+PA+ RPGR
Sbjct: 390 DELDSLCPRRSGSSESGSSVRVVNQLLTEMDGLQARKHVFIMGATNRPDIIDPAVMRPGR 449

Query: 569 LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----T 624
           LD+ + +               +PS   R +IL  L        L  +V    +A     
Sbjct: 450 LDKVLYV--------------GLPSAHDRQDILRTLTKEGRKPFLLPDVHLGLLAEDTRC 495

Query: 625 HGFVGADLAALCNEAALVCLR 645
           +GF GADLAAL  EA++  LR
Sbjct: 496 NGFSGADLAALVREASMAALR 516


>gi|119486666|ref|XP_001262319.1| AAA family ATPase, putative [Neosartorya fischeri NRRL 181]
 gi|119410476|gb|EAW20422.1| AAA family ATPase, putative [Neosartorya fischeri NRRL 181]
          Length = 688

 Score =  353 bits (906), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 232/635 (36%), Positives = 335/635 (52%), Gaps = 94/635 (14%)

Query: 411  SKLGGLSKEYAILKDII--ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            S LGGLS++   + + +   +S  K  + S     ++G+LL+GP GTGK++L        
Sbjct: 140  SGLGGLSRQIDSINESLADFNSGQKFRMPSF-YEHSRGILLYGPKGTGKSALLHQIQAAG 198

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
                F++ G  + S+N G++E  +  VF  A +  P+ + ID+LD IAP R       SQ
Sbjct: 199  WKKTFSL-GSSMFSRNIGDAEAKVRNVFQEAVRCQPSAIIIDQLDFIAPKRASLD---SQ 254

Query: 529  RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
             + + L   +D + ++  VLV+AAT  P+ ++  LR P RL  EIE+             
Sbjct: 255  SLTSVLCECLD-LAKSALVLVVAATRHPNDVDDTLRTPHRLAIEIEMQ------------ 301

Query: 589  AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
              VP+   R EIL A+       L ++ ++ ++  THG+VGADL AL     LVC +   
Sbjct: 302  --VPTAQDRAEILRAICGSSSRQLSEALIDMIAEKTHGYVGADLFALLQ---LVCRK--- 353

Query: 649  KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSS 708
                                                   R    S SP     P  + S+
Sbjct: 354  ------------------------------------ARQRQSCQSRSPTR---PCDVTST 374

Query: 709  SLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILE 768
              P+ G V  I  N    V D             L +E  D   A  + RP+AMREV LE
Sbjct: 375  PDPVAG-VEHIEKNM---VVD-------------LDIEESDVMSALQETRPTAMREVFLE 417

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
             PKV+W D+GGQ ++K +L +AVE P K  E  KR+  +   GIL++GPPGCSKTLM +A
Sbjct: 418  TPKVRWTDIGGQHDIKKRLQKAVERPLKFPERMKRLNVKSKKGILLYGPPGCSKTLMVKA 477

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+EAGLNFLAVKG E+ S +VGESE+A+R +F KAR+  PSIIFFDEID +A+ R    
Sbjct: 478  LATEAGLNFLAVKGAEILSMYVGESERALREIFRKARSARPSIIFFDEIDAIASRRNSSH 537

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             GV+    V++ LL E+DG+ +  NV VIAATN+PD IDPAL+RPGR D +LY+G P+  
Sbjct: 538  GGVN----VLTTLLNEMDGIEELKNVLVIAATNKPDVIDPALMRPGRLDNILYIGLPDFD 593

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR---I 1005
             R+EI  I  RK     +V++ ELA L+ G +GA+I  IC  A  +A++E  +  +   +
Sbjct: 594  ARKEILNIWFRKSVVHPEVDLEELAELTHGYSGAEIVSICETAGDAALDEEEETGQEQDV 653

Query: 1006 TMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNA 1040
              +H   A+  VQ     + +E   +++R   S A
Sbjct: 654  KWEHFTYALEQVQRQITDAVRE---EYERWGKSQA 685


>gi|294656475|ref|XP_458749.2| DEHA2D06688p [Debaryomyces hansenii CBS767]
 gi|199431503|emb|CAG86893.2| DEHA2D06688p [Debaryomyces hansenii CBS767]
          Length = 852

 Score =  353 bits (906), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 231/609 (37%), Positives = 338/609 (55%), Gaps = 52/609 (8%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +S LGGL      L ++I    +   +  S G+   +GVLL+GPPG GKT++A   A + 
Sbjct: 195  LSSLGGLENITTQLMELIGLPILHPEIYLSTGVEAPRGVLLYGPPGCGKTTIANALAGEL 254

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG--EEL 526
             V    ++ P VVS   GESE+ L E+FD A   AP ++F+DE+DAI P R DGG   E+
Sbjct: 255  QVPFLNISAPSVVSGMSGESEKKLREIFDEAKTLAPCIIFMDEIDAITPKR-DGGAQREM 313

Query: 527  SQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
             +R+VA LL LMD +   +TDG  V+VI ATNRPDS++ ALRR GR DREI ++      
Sbjct: 314  ERRIVAQLLTLMDELTLDKTDGKPVVVIGATNRPDSLDAALRRAGRFDREICLN------ 367

Query: 583  LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY-----LSMATHGFVGADLAALCN 637
                    VP+  QR  IL    S M  +L   E E+     L+  T G+VGADL +L  
Sbjct: 368  --------VPNEDQRCSIL----STMTKNLKLQEGEHFNFRELAKMTPGYVGADLKSLVT 415

Query: 638  EAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSA-SP 696
             A +  ++R  +  +  +       +    G  D    D D +    E++ +  + A SP
Sbjct: 416  AAGITAIKRIFESLSEQEEELLLKEV----GSIDIDPMDVDNNNTNNEANDNIENGALSP 471

Query: 697  CTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMK 756
              + +      S L    T+        N +S         E+   L +   DF  A   
Sbjct: 472  SNTFVAKFENKSDLEKLSTIQRFLVKHPNPLS--------PEQLAPLCINYSDFLNAIPT 523

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            ++P+A RE    VP V W++VG    ++ +L   +  P K  E + ++G   P+G+L++G
Sbjct: 524  IQPTAKREGFATVPDVTWQNVGALAHIRMELHMCIVQPIKKPELYLKVGITAPSGVLLWG 583

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F +A+A+ P IIFFDE
Sbjct: 584  PPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERAVRQVFQRAKASVPCIIFFDE 643

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            +D L   R  ++     S RV++ LL ELDGL+ R  V VI ATNRPD IDPA+LRPGR 
Sbjct: 644  LDALVPKR--DTSLSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRL 701

Query: 937  DRLLYVGPPNETDREEIFR--IHLRKIPCSSDVNIRELACLSEGC---TGADISLICREA 991
            D+ LY+  P   +R EI +  ++    P   +V++R +A   E C   +GAD+S + REA
Sbjct: 702  DKTLYIELPTNDERFEILKTLVNANNTPLDKNVDLRIVAD-DEKCRNFSGADLSSLVREA 760

Query: 992  AISAIEENL 1000
             + A+++  
Sbjct: 761  GVLALKKKF 769



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/236 (40%), Positives = 127/236 (53%), Gaps = 11/236 (4%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P  K   +GG   + TQLME +  P  H E +   G   P G+L++GPPGC KT +A A+
Sbjct: 191 PTSKLSSLGGLENITTQLMELIGLPILHPEIYLSTGVEAPRGVLLYGPPGCGKTTIANAL 250

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A E  + FL +  P + S   GESEK +R +F +A+  AP IIF DEID   AI  K   
Sbjct: 251 AGELQVPFLNISAPSVVSGMSGESEKKLREIFDEAKTLAPCIIFMDEID---AITPKRDG 307

Query: 890 GVS--VSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
           G    +  R+++QLL  +D L         V VI ATNRPD +D AL R GRFDR + + 
Sbjct: 308 GAQREMERRIVAQLLTLMDELTLDKTDGKPVVVIGATNRPDSLDAALRRAGRFDREICLN 367

Query: 944 PPNETDREEIFRIHLR--KIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            PNE  R  I     +  K+      N RELA ++ G  GAD+  +   A I+AI+
Sbjct: 368 VPNEDQRCSILSTMTKNLKLQEGEHFNFRELAKMTPGYVGADLKSLVTAAGITAIK 423


>gi|410985653|ref|XP_003999133.1| PREDICTED: nuclear valosin-containing protein-like isoform 2 [Felis
            catus]
          Length = 768

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 258/713 (36%), Positives = 372/713 (52%), Gaps = 98/713 (13%)

Query: 333  IFLVIGANKLPADLTN-------ERSQPQVTESMDHESNAFVINHETKVYLYP-PLNAVS 384
            +F VI + K P DLT        +R++    E+   ES++   +H++ +  YP P ++  
Sbjct: 62   VFSVITSEKEPKDLTELEDEHLAKRARQGEEENEYTESSS---DHDSNMEDYPDPQDSKD 118

Query: 385  KSL------REGTLPNA----QIEFQNVQATVE---QDISKLGGLSKEYAILK------- 424
             SL      R+G L       + + Q V   ++   Q  +K  GL  + + +K       
Sbjct: 119  ASLLESNEKRKGRLTRKGNQRKKDLQEVDGEIQAVLQRKAKAKGLELQISKVKFEDVGGS 178

Query: 425  --------DIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVN 476
                     ++I          LG  P +GVLLHGPPG GKT LA   A +  + +  V 
Sbjct: 179  DTTLKEVCKMLIHMRHPEVYRHLGATPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVA 238

Query: 477  GPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLN 536
              E+VS   GESEQ L E+F+ A  +AP V+FIDE+DAI P R    +++ +R+VA LL 
Sbjct: 239  ATEIVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKRDVASKDMERRIVAQLLT 298

Query: 537  LMDGV---CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPS 593
             MD +     T  VLVI ATNRPDS++PALRR GR DREI +               +P 
Sbjct: 299  CMDDLNTMAATAQVLVIGATNRPDSLDPALRRAGRFDREICL--------------GIPD 344

Query: 594  PAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQT 652
             A R  IL  L   +   L ++    +L+  T GFVG         A L+ L R + +  
Sbjct: 345  EASRERILRTLCRKLR--LPETFHFHHLAHLTPGFVG---------ADLMALCREAAMCA 393

Query: 653  SSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPL 712
             S VL         E  +D  ++ +  SR   E+       AS      P   L   L L
Sbjct: 394  VSRVLMKLP-----EPRADPEME-ALLSRGGRENGIGT-KPASEAQELSPQDELQRLLAL 446

Query: 713  RGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKV 772
                  +++    G                L++EL DF  A   V+PSA RE  + VP V
Sbjct: 447  LRNQDPLSEERLQG----------------LRIELNDFIVALSSVQPSAKREGFVTVPNV 490

Query: 773  KWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASE 832
             W D+G   +V+ +L  A+  P ++ + F+ +G   P G+L+ GPPGC KTL+A+AVA+E
Sbjct: 491  TWADIGALEDVREELTMAILAPVRNPDQFRALGLVTPAGVLLAGPPGCGKTLLAKAVANE 550

Query: 833  AGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS 892
            +GLNF++VKGPEL + +VGESE+AVR +F +A+ +AP +IFFDE+D L   R     G S
Sbjct: 551  SGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS 610

Query: 893  VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
            V  RV++QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ L+VG P   DR  
Sbjct: 611  V--RVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 668

Query: 953  IFRIHLR---KIPCSSDVNIRELAC-LSEGC-TGADISLICREAAISAIEENL 1000
            I +   +   K P ++DV++  LA  L   C +GAD+S + REA++ A+ + +
Sbjct: 669  ILKTITQNGTKPPLAADVSLEALAGDLRCDCYSGADLSALVREASVCALRQEM 721


>gi|330791557|ref|XP_003283859.1| hypothetical protein DICPUDRAFT_147573 [Dictyostelium purpureum]
 gi|325086245|gb|EGC39638.1| hypothetical protein DICPUDRAFT_147573 [Dictyostelium purpureum]
          Length = 851

 Score =  353 bits (905), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 158/276 (57%), Positives = 216/276 (78%), Gaps = 2/276 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + D   A  +V+PS+MREV++E+PKV W D+GGQ  +K +L EA+EWP KH E+F 
Sbjct: 555  IKVSMEDMLLALNQVKPSSMREVVVEIPKVYWNDIGGQEHIKQKLKEAIEWPLKHPESFI 614

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP GIL++GPPGCSKTL+A+A+A+E+GLNF+AVKGPEL SKWVGESE+AVR +F 
Sbjct: 615  RMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFK 674

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR NAPSI+FFDEIDGLA  R  E  G    +RV+SQLL E+DG+    NVT+I ATNR
Sbjct: 675  KARQNAPSILFFDEIDGLAISRSGEGSG--AVERVVSQLLTEMDGIQPLTNVTIIGATNR 732

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID A+LR GR DR+LY+ PP+   R+EIF IHL+K+P S+D+N+ EL+ L++G +GA
Sbjct: 733  PDIIDKAILRAGRIDRILYISPPDFDARKEIFNIHLKKVPHSNDINVEELSNLTDGYSGA 792

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            +++ ICREA+I A++++L+A +I M H   AI +V+
Sbjct: 793  EVTSICREASICAMKQDLNAKQIEMNHFIQAISNVK 828



 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/248 (42%), Positives = 155/248 (62%), Gaps = 28/248 (11%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   +++II  S  KS L +S G++P KG+LL+GPPGTGKT LAR+ ++ +   
Sbjct: 297 IGGLDNQVKQIREIIELSFYKSKLLNSFGIKPPKGILLYGPPGTGKTLLARIVSNQTNAT 356

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           LFT+NG +++ + YG +E+ L  +F  AS+ AP+++FIDELDA+ P R++   E+ +R+V
Sbjct: 357 LFTINGADILDKFYGMTEKTLLNIFKEASRKAPSIIFIDELDALCPKREENSSEVEKRVV 416

Query: 532 ATLLNLMDGVCRTDG-------------VLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
            +LL LMDG+    G             V+VI  TNRPDSI+ ALRRPGR D EIEI   
Sbjct: 417 GSLLTLMDGIAIGGGNEENEEENENKNKVIVIGCTNRPDSIDSALRRPGRFDNEIEI--- 473

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                      ++P+   R +IL   LS + + L + E+ ++S  THGFVGAD+ +LC E
Sbjct: 474 -----------SIPNQQGREQILKIFLSKIPNQLNEKEINFISSKTHGFVGADIESLCKE 522

Query: 639 AALVCLRR 646
           A+L C  R
Sbjct: 523 ASLKCFNR 530



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 143/285 (50%), Gaps = 40/285 (14%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +E +GG      Q+ E +E      +     G +PP GIL++GPPG  KTL+AR V++
Sbjct: 292  LNYELIGGLDNQVKQIREIIELSFYKSKLLNSFGIKPPKGILLYGPPGTGKTLLARIVSN 351

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            +       + G ++  K+ G +EK + ++F +A   APSIIF DE+D L   R  E +  
Sbjct: 352  QTNATLFTINGADILDKFYGMTEKTLLNIFKEASRKAPSIIFIDELDALCPKR--EENSS 409

Query: 892  SVSDRVMSQLLVELDGL-------------HQRVNVTVIAATNRPDKIDPALLRPGRFDR 938
             V  RV+  LL  +DG+               +  V VI  TNRPD ID AL RPGRFD 
Sbjct: 410  EVEKRVVGSLLTLMDGIAIGGGNEENEEENENKNKVIVIGCTNRPDSIDSALRRPGRFDN 469

Query: 939  LLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS---EGCTGADISLICREAAISA 995
             + +  PN+  RE+I +I L KIP  + +N +E+  +S    G  GADI  +C+EA++  
Sbjct: 470  EIEISIPNQQGREQILKIFLSKIP--NQLNEKEINFISSKTHGFVGADIESLCKEASLKC 527

Query: 996  IEE--------------------NLDASRITMQHLKTAIRHVQPS 1020
                                    L+  +++M+ +  A+  V+PS
Sbjct: 528  FNRIKNENLSLFLNNENNNGLNSILELIKVSMEDMLLALNQVKPS 572



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 127/208 (61%), Gaps = 15/208 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KG+LL+GPPG  KT LA+  A +SG+N   V GPE++S+  GESE+A+ ++F  
Sbjct: 616 MGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKK 675

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A Q+AP+++F DE+D +A +R   G    +R+V+ LL  MDG+     V +I ATNRPD 
Sbjct: 676 ARQNAPSILFFDEIDGLAISRSGEGSGAVERVVSQLLTEMDGIQPLTNVTIIGATNRPDI 735

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           I+ A+ R GR+DR           +L  SP   P    R EI +  L  + HS  D  VE
Sbjct: 736 IDKAILRAGRIDR-----------ILYISP---PDFDARKEIFNIHLKKVPHS-NDINVE 780

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRR 646
            LS  T G+ GA++ ++C EA++  +++
Sbjct: 781 ELSNLTDGYSGAEVTSICREASICAMKQ 808


>gi|303280281|ref|XP_003059433.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459269|gb|EEH56565.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 673

 Score =  352 bits (904), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 237/603 (39%), Positives = 343/603 (56%), Gaps = 75/603 (12%)

Query: 410  ISKLGGLSKEYAILKDIIISSSVKSTLSS-LGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +  LGG+ +    ++++I+       L   LG+ P +GVLLHGPPG GKT+LA   A ++
Sbjct: 12   LEDLGGIEESLTAIRELILCPLTHPELYGWLGVDPPRGVLLHGPPGCGKTTLAHAIAREA 71

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            GV  F++   E+V+   GESE  + ++F +A+Q+AP++VFIDE+DAI P R     ++  
Sbjct: 72   GVPFFSIAATEIVAGVSGESEAKIRQLFAAAAQAAPSIVFIDEIDAIVPKRDSAARQMES 131

Query: 529  RMVATLL----NLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA LL    NL+DG  R   V VI ATNRPD ++ ALRR GR DREI +         
Sbjct: 132  RIVAQLLASMDNLIDGAARGH-VTVIGATNRPDGMDAALRRAGRFDREIML--------- 181

Query: 585  KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALV 642
                  VP  A R  IL      +    L+  ++ + +A  T G+VGADL+AL  EAA +
Sbjct: 182  -----GVPDEAARARILAVQAKKLR---LEGGLDLVDIARKTAGYVGADLSALAKEAAAL 233

Query: 643  CLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLP 702
             + R                   F+  SD  + D    ++++++S    ++A+       
Sbjct: 234  AVARI------------------FKHMSDKHVSDD---KHVSDAS----ENAAGAEIAAR 268

Query: 703  TSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAM 762
             SLL +          +AD      S+ S           L +   DFEKA  +V+PSA 
Sbjct: 269  ASLLGAG--------RLADRTPFDASELSN----------LSITTDDFEKALTRVQPSAQ 310

Query: 763  REVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            RE     P+V W+DVG   EV+ +L  +V  P  H   F+ +G    TG+L++GPPGC K
Sbjct: 311  REGFTTTPEVTWDDVGSLTEVREELAFSVVEPIAHPARFQAMGLAVSTGVLLYGPPGCGK 370

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL+A+A A  A  NF+++KGPEL +K+VGESE+AVR+LF +AR+ AP ++FFDE+D LA 
Sbjct: 371  TLVAKATACAAKANFISIKGPELLNKYVGESERAVRTLFQRARSAAPCVLFFDELDSLAP 430

Query: 883  IRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
             RG +  G   S+RV++QLL E+DGL  R    VIAATNRPD IDPA+LRPGR D+LLYV
Sbjct: 431  RRGNDG-GNQASERVVNQLLTEMDGLEARSATFVIAATNRPDMIDPAMLRPGRLDKLLYV 489

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELA----CLSEGCTGADISLICREAAISAIEE 998
              P    R  I R   RK P + +V++  +A    C  +G +GAD++ + REA ++A++ 
Sbjct: 490  PLPPPDGRVAILRTLTRKTPLAKEVDVDAIARSPRC--DGFSGADLASLVREACVAALKG 547

Query: 999  NLD 1001
            NL+
Sbjct: 548  NLE 550



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 127/215 (59%), Gaps = 5/215 (2%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V+ ED+GG  E  T + E +  P  H E +  +G  PP G+L+ GPPGC KT +A A+A 
Sbjct: 10  VRLEDLGGIEESLTAIRELILCPLTHPELYGWLGVDPPRGVLLHGPPGCGKTTLAHAIAR 69

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EAG+ F ++   E+ +   GESE  +R LFA A   APSI+F DEID  A +  ++S   
Sbjct: 70  EAGVPFFSIAATEIVAGVSGESEAKIRQLFAAAAQAAPSIVFIDEID--AIVPKRDSAAR 127

Query: 892 SVSDRVMSQLLVELDGL---HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
            +  R+++QLL  +D L     R +VTVI ATNRPD +D AL R GRFDR + +G P+E 
Sbjct: 128 QMESRIVAQLLASMDNLIDGAARGHVTVIGATNRPDGMDAALRRAGRFDREIMLGVPDEA 187

Query: 949 DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            R  I  +  +K+     +++ ++A  + G  GAD
Sbjct: 188 ARARILAVQAKKLRLEGGLDLVDIARKTAGYVGAD 222



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/270 (37%), Positives = 148/270 (54%), Gaps = 25/270 (9%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+AQ E F         D+  L  + +E A    ++   +  +   ++GL  + GVLL+G
Sbjct: 307 PSAQREGFTTTPEVTWDDVGSLTEVREELAF--SVVEPIAHPARFQAMGLAVSTGVLLYG 364

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPG GKT +A+  A  +  N  ++ GPE++++  GESE+A+  +F  A  +AP V+F DE
Sbjct: 365 PPGCGKTLVAKATACAAKANFISIKGPELLNKYVGESERAVRTLFQRARSAAPCVLFFDE 424

Query: 512 LDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLD 570
           LD++AP R  DGG + S+R+V  LL  MDG+       VIAATNRPD I+PA+ RPGRLD
Sbjct: 425 LDSLAPRRGNDGGNQASERVVNQLLTEMDGLEARSATFVIAATNRPDMIDPAMLRPGRLD 484

Query: 571 REIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HG 626
           + + + +              P P  R+ IL  L      + L  EV+  ++A      G
Sbjct: 485 KLLYVPL--------------PPPDGRVAILRTL---TRKTPLAKEVDVDAIARSPRCDG 527

Query: 627 FVGADLAALCNEAALVCLRRYSKIQTSSDV 656
           F GADLA+L  EA +  L+   +I T+ DV
Sbjct: 528 FSGADLASLVREACVAALKGNLEIATAWDV 557


>gi|328868721|gb|EGG17099.1| AAA ATPase domain-containing protein [Dictyostelium fasciculatum]
          Length = 756

 Score =  352 bits (904), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 158/290 (54%), Positives = 224/290 (77%), Gaps = 2/290 (0%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            ++L D   A  K+RPS+MREVI+EVPKVKWED+GGQ ++K +L EA+EWP KH  AF+R+
Sbjct: 462  VDLSDMMIAMEKIRPSSMREVIVEVPKVKWEDIGGQDDIKEKLKEAIEWPLKHPAAFERM 521

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G RPP GIL++GPPGCSKTL+A+A+A+E+GLNF+AVKGPEL SKWVGESE+AVR +F KA
Sbjct: 522  GIRPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELISKWVGESERAVRDIFKKA 581

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R N+PSI+FFDE+DGLA  R  +  G    +RV+SQLL E+DG+    NVT++AATNRPD
Sbjct: 582  RQNSPSILFFDEMDGLATERSGQGSG--AIERVVSQLLTEMDGIQPLTNVTIVAATNRPD 639

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
             ID A+LR GR DR+LY+ PP++  R+EIF+IHL K+P S+D++I  L+ +++G +GA++
Sbjct: 640  IIDKAILRAGRIDRILYISPPDQKARKEIFKIHLLKVPHSNDIDIDLLSNITDGYSGAEV 699

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            + IC+EA++ A++E+L+  ++ M+H ++AI  V+        E    +Q+
Sbjct: 700  TSICKEASVCAMKEDLNIEKVEMRHFQSAIGLVKKGITKEMIEFYDNYQK 749



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 100/250 (40%), Positives = 161/250 (64%), Gaps = 18/250 (7%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           +S +GGLS +   +K+I+ ++   +  L+  G++P +GVLL+GPPGTGKT LAR  A +S
Sbjct: 216 VSMIGGLSNQMKEIKEILSLAFEKREMLNRFGIKPPRGVLLYGPPGTGKTMLARTVASES 275

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
           G  LFT+NG +++ + YG +E+A+  +F  A+Q AP+++FIDELDA+ P R     E+ +
Sbjct: 276 GCTLFTMNGADILDKYYGVTEKAIQSIFRDAAQRAPSIIFIDELDALCPKRDQATTEIEK 335

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V  LL L+DG+   + V+VI  TNRPD+++ +LRRPGRLDREIEI             
Sbjct: 336 RLVGCLLTLLDGINSDERVVVIGCTNRPDALDGSLRRPGRLDREIEI------------- 382

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
             +P+   R +IL  + S + + L  +++  ++  THG+VGADL +L  E+   CL ++ 
Sbjct: 383 -GIPNAINRQDILGIICSRIPNQLTPADIGLVASKTHGYVGADLESLVKES---CLIKFH 438

Query: 649 KIQTSSDVLH 658
           K+  + ++L+
Sbjct: 439 KLIKNGEILN 448



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 142/264 (53%), Gaps = 19/264 (7%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 836
            +GG      ++ E +    + +E   R G +PP G+L++GPPG  KT++AR VASE+G  
Sbjct: 219  IGGLSNQMKEIKEILSLAFEKREMLNRFGIKPPRGVLLYGPPGTGKTMLARTVASESGCT 278

Query: 837  FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR 896
               + G ++  K+ G +EKA++S+F  A   APSIIF DE+D L   R + +    +  R
Sbjct: 279  LFTMNGADILDKYYGVTEKAIQSIFRDAAQRAPSIIFIDELDALCPKRDQAT--TEIEKR 336

Query: 897  VMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRI 956
            ++  LL  LDG++    V VI  TNRPD +D +L RPGR DR + +G PN  +R++I  I
Sbjct: 337  LVGCLLTLLDGINSDERVVVIGCTNRPDALDGSLRRPGRLDREIEIGIPNAINRQDILGI 396

Query: 957  HLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAI-------------EENLDA 1002
               +IP   +  +I  +A  + G  GAD+  + +E+ +                EE+ DA
Sbjct: 397  ICSRIPNQLTPADIGLVASKTHGYVGADLESLVKESCLIKFHKLIKNGEILNDKEEDKDA 456

Query: 1003 S---RITMQHLKTAIRHVQPSEIH 1023
            S    + +  +  A+  ++PS + 
Sbjct: 457  SSQFSVDLSDMMIAMEKIRPSSMR 480



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 127/212 (59%), Gaps = 15/212 (7%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           +    +G+RP KG+LL+GPPG  KT LA+  A +SG+N   V GPE++S+  GESE+A+ 
Sbjct: 516 AAFERMGIRPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELISKWVGESERAVR 575

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           ++F  A Q++P+++F DE+D +A  R   G    +R+V+ LL  MDG+     V ++AAT
Sbjct: 576 DIFKKARQNSPSILFFDEMDGLATERSGQGSGAIERVVSQLLTEMDGIQPLTNVTIVAAT 635

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+ A+ R GR+DR           +L  SP   P    R EI    L  + HS  
Sbjct: 636 NRPDIIDKAILRAGRIDR-----------ILYISP---PDQKARKEIFKIHLLKVPHS-N 680

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D +++ LS  T G+ GA++ ++C EA++  ++
Sbjct: 681 DIDIDLLSNITDGYSGAEVTSICKEASVCAMK 712


>gi|328774431|gb|EGF84468.1| hypothetical protein BATDEDRAFT_85172 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 747

 Score =  352 bits (903), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 172/300 (57%), Positives = 221/300 (73%), Gaps = 6/300 (2%)

Query: 720  ADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG 779
            A++ + GV  +   M + +    L++ L D       V+PSAMREV LEVPKVKW D+GG
Sbjct: 432  AESLNAGVVQTDDEMHLLD----LQITLEDMRLGMSMVQPSAMREVTLEVPKVKWTDIGG 487

Query: 780  QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLA 839
            Q +VK +L EAVEWP KH EAF +    PP GIL++GPPGCSKTLMA+A+A+EAGLNFLA
Sbjct: 488  QEDVKQRLREAVEWPLKHPEAFLKFNISPPKGILLYGPPGCSKTLMAKALATEAGLNFLA 547

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMS 899
            VKGPELFSKWVGESEKAV+ +F KARA +PSIIFFDEID LA  RG   D  SV+DRV+S
Sbjct: 548  VKGPELFSKWVGESEKAVQEIFRKARAASPSIIFFDEIDALAVRRG--GDDASVADRVLS 605

Query: 900  QLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR 959
            QLL ELDG+   +NVT++AATNRPD +D ALLRPGR D +LYV PP+   RE+IFRI   
Sbjct: 606  QLLNELDGIEPLINVTIVAATNRPDILDTALLRPGRIDSILYVSPPDADSREQIFRIQTN 665

Query: 960  KIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            ++ CS DV++++LA L+EG +GA+   +C+EAA+ A+EE+L A  +  +H   AI+ + P
Sbjct: 666  RMACSDDVDLKKLAELTEGLSGAETMAVCQEAALHAMEEDLHALCVFQRHFIDAIKRITP 725



 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/266 (40%), Positives = 168/266 (63%), Gaps = 27/266 (10%)

Query: 394 NAQIEFQNVQATVEQDISK-----LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGV 447
           + ++ F+  ++TVE  + K     +GGL ++ + ++ ++ ++      +S LG RP +G+
Sbjct: 178 STRVRFEQAKSTVETRVGKVEYSTIGGLGEQISTVRSLVELTLCNPEHISCLGFRPPRGI 237

Query: 448 LLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVV 507
           LL GPPGTGKT LAR  A+++  ++ TVNG E++S+ +GE+E  LH +F  A++ +P+++
Sbjct: 238 LLFGPPGTGKTLLARAVAYETSAHVITVNGSEIMSRFHGEAETRLHHIFQEANEKSPSII 297

Query: 508 FIDELDAIAPARKDGGEELSQRMVATLLNLMDGV-------CRTDGVLVIAATNRPDSIE 560
           F+DE+DA+ P R +G  E+ QR+VA LL LMDG+        +   ++VI ATNRP++I+
Sbjct: 298 FLDEIDALCPKRDEGATEVHQRIVAALLTLMDGINTYSSKTTQHHRLVVIGATNRPNAID 357

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
            ALRRPGR D EIEI               +PS   R EIL ALL  + +SL D ++  +
Sbjct: 358 DALRRPGRFDHEIEI--------------GIPSEIHRFEILQALLKKVPNSLNDMDLRTI 403

Query: 621 SMATHGFVGADLAALCNEAALVCLRR 646
           S   HG+VGADLAA+C EA L  ++R
Sbjct: 404 SANAHGYVGADLAAICREAGLKAIQR 429



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/298 (37%), Positives = 166/298 (55%), Gaps = 35/298 (11%)

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            V FE+A+  V           V KV++  +GG  E  + +   VE    + E    +G R
Sbjct: 181  VRFEQAKSTVET--------RVGKVEYSTIGGLGEQISTVRSLVELTLCNPEHISCLGFR 232

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
            PP GIL+FGPPG  KTL+ARAVA E   + + V G E+ S++ GE+E  +  +F +A   
Sbjct: 233  PPRGILLFGPPGTGKTLLARAVAYETSAHVITVNGSEIMSRFHGEAETRLHHIFQEANEK 292

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLH-------QRVNVTVIAAT 920
            +PSIIF DEID L   R  +     V  R+++ LL  +DG++       Q   + VI AT
Sbjct: 293  SPSIIFLDEIDALCPKR--DEGATEVHQRIVAALLTLMDGINTYSSKTTQHHRLVVIGAT 350

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGC 979
            NRP+ ID AL RPGRFD  + +G P+E  R EI +  L+K+P S +D+++R ++  + G 
Sbjct: 351  NRPNAIDDALRRPGRFDHEIEIGIPSEIHRFEILQALLKKVPNSLNDMDLRTISANAHGY 410

Query: 980  TGADISLICREAAISAIE----ENLDAS-------------RITMQHLKTAIRHVQPS 1020
             GAD++ ICREA + AI+    E+L+A              +IT++ ++  +  VQPS
Sbjct: 411  VGADLAAICREAGLKAIQRIEAESLNAGVVQTDDEMHLLDLQITLEDMRLGMSMVQPS 468



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 119/203 (58%), Gaps = 15/203 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
             + P KG+LL+GPPG  KT +A+  A ++G+N   V GPE+ S+  GESE+A+ E+F  
Sbjct: 512 FNISPPKGILLYGPPGCSKTLMAKALATEAGLNFLAVKGPELFSKWVGESEKAVQEIFRK 571

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A  ++P+++F DE+DA+A  R      ++ R+++ LLN +DG+     V ++AATNRPD 
Sbjct: 572 ARAASPSIIFFDEIDALAVRRGGDDASVADRVLSQLLNELDGIEPLINVTIVAATNRPDI 631

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           ++ AL RPGR+D           S+L  SP   P    R +I     + M  S  D +++
Sbjct: 632 LDTALLRPGRID-----------SILYVSP---PDADSREQIFRIQTNRMACS-DDVDLK 676

Query: 619 YLSMATHGFVGADLAALCNEAAL 641
            L+  T G  GA+  A+C EAAL
Sbjct: 677 KLAELTEGLSGAETMAVCQEAAL 699


>gi|432950173|ref|XP_004084417.1| PREDICTED: nuclear valosin-containing protein-like [Oryzias latipes]
          Length = 781

 Score =  352 bits (902), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 234/651 (35%), Positives = 335/651 (51%), Gaps = 127/651 (19%)

Query: 413  LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
            +GG  +    +  ++I          LG+ P +G LLHGPPG GKT LA           
Sbjct: 229  VGGNEEALTEVCKLLIYMHHPEVFQQLGVVPPRGFLLHGPPGCGKTLLA----------- 277

Query: 473  FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVA 532
                             QA+      A  S+P ++FIDE+DAI P R+   +++ +RMVA
Sbjct: 278  -----------------QAV------AGSSSPCILFIDEIDAITPKREVASKDMERRMVA 314

Query: 533  TLLNLMDGVCR---TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
             LL  MD +     T  V++I ATNRPDS++PALRR GR DREI +              
Sbjct: 315  QLLTCMDDLNSLPVTVQVMIIGATNRPDSLDPALRRAGRFDREISL-------------- 360

Query: 590  AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRY 647
             +P  A RL IL  L   +    L ++ ++L +A  T G+VGADL ALC EAA+  + R 
Sbjct: 361  GIPDEAARLRILETLCRKLT---LPADFDFLKLARLTPGYVGADLMALCREAAMNAVNR- 416

Query: 648  SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLS 707
                    +L + GT  E +G S+  L+ S                   C +   +  L 
Sbjct: 417  --------ILMAVGTPAEDQGSSEKKLERS-------------------CPAVAKSKQLQ 449

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
              L L  T                  M   E    L + ++DF+ A   V+PSA RE   
Sbjct: 450  HLLSLLKTTE----------------MLPQEDLAVLSIFMLDFQAALSSVQPSAKREGFA 493

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
             VP V WE VG  ++V+ +L  A+  P +  E F+ +G   P+G+L+ GPPGC KTL+A+
Sbjct: 494  TVPDVSWEHVGALQDVREELTMAILAPVRSPELFRALGLGAPSGVLLAGPPGCGKTLLAK 553

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+GLNF++VKGPEL + +VGESE+AVR +F + R +AP +IFFDEID L   R   
Sbjct: 554  AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGH 613

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G S+  RV++QLL E+DGL  R  V ++AATNRPD IDPA+LRPGR D+ LYVG P  
Sbjct: 614  ESGASI--RVVNQLLTEMDGLETRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPGP 671

Query: 948  TDREEIFRIHLR---KIPCSSDVNIRELACLSEGC---TGADISLICREAAISAIEENLD 1001
             DR  I     +   +     DV++ E+A   E C   +GAD++ + REA+++A+++ L 
Sbjct: 672  ADRCAILLAITKGGTRPQLGPDVHLEEIAS-DERCSSFSGADLTALVREASVNALKDYLK 730

Query: 1002 AS--------------RITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            +               +++  H + A+  V+PS    E   Y++L    QR
Sbjct: 731  SQQGGEALPSGCTVDIQVSRVHFEEALNKVRPSVSPKEQLRYEQLRDSLQR 781



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 126/239 (52%), Gaps = 40/239 (16%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            L+ P V +EDVGG  E  T++ + + +   H E F+++G  PP G L+ GPPGC KTL+A
Sbjct: 219  LQYPCVTFEDVGGNEEALTEVCKLLIY-MHHPEVFQQLGVVPPRGFLLHGPPGCGKTLLA 277

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA                                   +++P I+F DEID +   R  
Sbjct: 278  QAVAG----------------------------------SSSPCILFIDEIDAITPKR-- 301

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            E     +  R+++QLL  +D L+     V V +I ATNRPD +DPAL R GRFDR + +G
Sbjct: 302  EVASKDMERRMVAQLLTCMDDLNSLPVTVQVMIIGATNRPDSLDPALRRAGRFDREISLG 361

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
             P+E  R  I     RK+   +D +  +LA L+ G  GAD+  +CREAA++A+   L A
Sbjct: 362  IPDEAARLRILETLCRKLTLPADFDFLKLARLTPGYVGADLMALCREAAMNAVNRILMA 420


>gi|406859794|gb|EKD12857.1| ribosome biogenesis ATPase [Marssonina brunnea f. sp. 'multigermtubi'
            MB_m1]
          Length = 764

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 237/656 (36%), Positives = 352/656 (53%), Gaps = 113/656 (17%)

Query: 410  ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            +  LGG+      LKD++ I           G++PT+GVLLHGPPG GKT +A   A + 
Sbjct: 185  LENLGGVEHVIKELKDLVGIPMLFAEGYIKTGIQPTRGVLLHGPPGCGKTMIANAFAAEI 244

Query: 469  GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
             V+   ++ P +V+   GESE+ + ++FD A + AP +VFIDE+D I   R+    E+ +
Sbjct: 245  EVSFIPISAPSLVAGMSGESEKKIRDLFDEAKRMAPCLVFIDEIDVIMGKRESAQREMEK 304

Query: 529  RMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+VA +L  MD +   +T G  V+++AATNRPDS++PALRR GR ++EI +         
Sbjct: 305  RIVAQMLTCMDDMALEKTGGKPVIILAATNRPDSLDPALRRAGRFNKEINL--------- 355

Query: 585  KNSPAAVPSPAQRLEILHALLS------GMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                  VP+   R +IL AL        G++HS        L+  T GFVGADL  + + 
Sbjct: 356  -----GVPNEEAREKILRALTKKLTVSDGVDHS-------QLAKLTPGFVGADLNDVVSV 403

Query: 639  AALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCT 698
            A    ++R + + T                            R++T      +D+ SP  
Sbjct: 404  AGTEAMKRMNAVLTE---------------------------RSVTAMD---IDTISPA- 432

Query: 699  SDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVR 758
            SD+P+SL+     LR  V+            S  G  + +   ++  E  DF  A  KV+
Sbjct: 433  SDIPSSLVE----LRALVAA-----------SKAGKLLPDGDFSITYE--DFLTAITKVQ 475

Query: 759  PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
            PSA RE    +P   W  VG   EV+ QL   +  P ++ E F R+G   P G+L++GPP
Sbjct: 476  PSAKREGFATIPDTTWAHVGALHEVREQLEMTIVDPIQNPERFARVGITMPAGVLLWGPP 535

Query: 819  GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
            GC KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F +AR++ P I+FFDE+D
Sbjct: 536  GCGKTLLAKAVANESKANFISIKGPELLNKYVGESERAVRQVFERARSSVPCILFFDELD 595

Query: 879  GLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
             L     K  D +S  S +V++ LL ELDGL  R  + VIAATNRPD IDPA+LRPGR  
Sbjct: 596  ALVP---KREDSLSEASSKVVNTLLTELDGLGSRTGIYVIAATNRPDMIDPAMLRPGRLG 652

Query: 938  RLLYVGPPNETDREEIFR-IHLRKIPCSSDVNIRELACLSE-----GCT---GADI---- 984
              +++  P + DR EI + ++++ +   +D  + E+  L E      CT   GAD+    
Sbjct: 653  LSVFIDLPTKEDRVEILKALYVKAL---ADSTVEEVDALKEVAEDDRCTNYSGADLWNLQ 709

Query: 985  -----SLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRL 1035
                 + I RE     + ENL   RI  +  + A+  V+P    S K+ +AK++RL
Sbjct: 710  QAAGHAAIRREKHAGVVTENL---RIAREDWEVALGKVKP----SVKD-AAKYRRL 757



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 135/231 (58%), Gaps = 8/231 (3%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V  E++GG   V  +L + V  P    E + + G +P  G+L+ GPPGC KT++A A A+
Sbjct: 183 VSLENLGGVEHVIKELKDLVGIPMLFAEGYIKTGIQPTRGVLLHGPPGCGKTMIANAFAA 242

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK-ESDG 890
           E  ++F+ +  P L +   GESEK +R LF +A+  AP ++F DEID    I GK ES  
Sbjct: 243 EIEVSFIPISAPSLVAGMSGESEKKIRDLFDEAKRMAPCLVFIDEID---VIMGKRESAQ 299

Query: 891 VSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
             +  R+++Q+L  +D +         V ++AATNRPD +DPAL R GRF++ + +G PN
Sbjct: 300 REMEKRIVAQMLTCMDDMALEKTGGKPVIILAATNRPDSLDPALRRAGRFNKEINLGVPN 359

Query: 947 ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           E  RE+I R   +K+  S  V+  +LA L+ G  GAD++ +   A   A++
Sbjct: 360 EEAREKILRALTKKLTVSDGVDHSQLAKLTPGFVGADLNDVVSVAGTEAMK 410


>gi|237839317|ref|XP_002368956.1| ATPase, AAA family domain-containing protein [Toxoplasma gondii ME49]
 gi|211966620|gb|EEB01816.1| ATPase, AAA family domain-containing protein [Toxoplasma gondii ME49]
          Length = 746

 Score =  351 bits (900), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 201/506 (39%), Positives = 289/506 (57%), Gaps = 74/506 (14%)

Query: 506  VVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRR 565
            ++FIDE+DA+ P R++   E+ +R V  LL+ +DG+     + V+AATN P  ++ A+RR
Sbjct: 239  LLFIDEIDAVCPKREEA-TEVGRRAVCALLSCLDGIATDGSLFVLAATNHPYLLDDAIRR 297

Query: 566  PGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH 625
             GRL+R+IE+               VP+  +R EIL  LL  + H+L D ++  LS    
Sbjct: 298  AGRLERDIEV--------------GVPTAEERREILAKLLDSVPHNLRDEDIHELSGLCQ 343

Query: 626  GFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITE 685
             FV ADL  L   AA   L+ +  I+TS D+                           ++
Sbjct: 344  AFVPADLRLLVTTAATQALKAFLPIETSGDM--------------------------PSD 377

Query: 686  SSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKL 745
             +RD L      T  +P +L                             F+S++   + L
Sbjct: 378  DTRDELQGGEEATESVPGAL----------------------------AFLSKENKPVTL 409

Query: 746  ELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIG 805
            +   F +A   V+PSA++ V +EVP+VKW+++GG   VK  L E VEWP K+   F+++ 
Sbjct: 410  K--HFRRALRHVKPSALKSVAIEVPQVKWDEIGGYASVKKSLQECVEWPLKYAHLFRQLK 467

Query: 806  TRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR 865
              PP G+L++GPPGCSKT+MA+AVA+E+ +NF++VKGPELFSKWVGESE+AVR +F KAR
Sbjct: 468  VSPPRGMLLYGPPGCSKTMMAKAVATESKMNFISVKGPELFSKWVGESERAVREVFRKAR 527

Query: 866  ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDK 925
             NAP +IFFDE+D +   R +  D   V  RV+SQLL E+DG+     V VIAATNRPD 
Sbjct: 528  QNAPCVIFFDEVDAMGGDR-ETGDAGGVDSRVLSQLLNEMDGIGPVREVIVIAATNRPDL 586

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADIS 985
            +D ALLRPGR DRL+YV  P+   R EI    L+ +P S +V    LA  + G +GA+I 
Sbjct: 587  LDAALLRPGRLDRLVYVPLPDWEARREIVVKMLKNMPVSLEVCADSLASATHGYSGAEIV 646

Query: 986  LICREAAISAIEENLDASRITMQHLK 1011
            +ICREA+++A+ E +  +R T Q L+
Sbjct: 647  MICREASMAAVREAV--ARYTDQQLQ 670



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 141/252 (55%), Gaps = 16/252 (6%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           L + P +G+LL+GPPG  KT +A+  A +S +N  +V GPE+ S+  GESE+A+ EVF  
Sbjct: 466 LKVSPPRGMLLYGPPGCSKTMMAKAVATESKMNFISVKGPELFSKWVGESERAVREVFRK 525

Query: 499 ASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
           A Q+AP V+F DE+DA+   R+ G    +  R+++ LLN MDG+     V+VIAATNRPD
Sbjct: 526 ARQNAPCVIFFDEVDAMGGDRETGDAGGVDSRVLSQLLNEMDGIGPVREVIVIAATNRPD 585

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            ++ AL RPGRLDR + + +              P    R EI+  +L  M  S L+   
Sbjct: 586 LLDAALLRPGRLDRLVYVPL--------------PDWEARREIVVKMLKNMPVS-LEVCA 630

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDS 677
           + L+ ATHG+ GA++  +C EA++  +R      T   + H   + F  +         S
Sbjct: 631 DSLASATHGYSGAEIVMICREASMAAVREAVARYTDQQLQHQRCSAFSEKVELKLSTDKS 690

Query: 678 DCSRNITESSRD 689
           + ++ + ESS D
Sbjct: 691 ERTQCVQESSDD 702



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 40/192 (20%)

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
            +++F DEID   A+  K  +   V  R +  LL  LDG+    ++ V+AATN P  +D A
Sbjct: 238  TLLFIDEID---AVCPKREEATEVGRRAVCALLSCLDGIATDGSLFVLAATNHPYLLDDA 294

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLIC 988
            + R GR +R + VG P   +R EI    L  +P +  D +I EL+ L +    AD+ L+ 
Sbjct: 295  IRRAGRLERDIEVGVPTAEERREILAKLLDSVPHNLRDEDIHELSGLCQAFVPADLRLLV 354

Query: 989  REAAISAIEENL----------DASR--------------------------ITMQHLKT 1012
              AA  A++  L          D +R                          +T++H + 
Sbjct: 355  TTAATQALKAFLPIETSGDMPSDDTRDELQGGEEATESVPGALAFLSKENKPVTLKHFRR 414

Query: 1013 AIRHVQPSEIHS 1024
            A+RHV+PS + S
Sbjct: 415  ALRHVKPSALKS 426



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P+     VGG   V  +LM ++  P    + F+  G  PP G+L++GPPG  KT +ARA+
Sbjct: 5   PRGGLNRVGGLHRVLPELMWSLILPLLRPDLFQAYGVLPPKGVLLYGPPGSGKTHLARAL 64

Query: 830 ASE 832
           A E
Sbjct: 65  AEE 67



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)

Query: 410 ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           ++++GGL +    L   +I   ++  L  + G+ P KGVLL+GPPG+GKT LAR  A + 
Sbjct: 9   LNRVGGLHRVLPELMWSLILPLLRPDLFQAYGVLPPKGVLLYGPPGSGKTHLARALAEEI 68

Query: 469 GVNLFTVN 476
            V    VN
Sbjct: 69  QVVAEEVN 76


>gi|395531440|ref|XP_003767786.1| PREDICTED: nuclear valosin-containing protein-like isoform 1
            [Sarcophilus harrisii]
          Length = 903

 Score =  350 bits (898), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 231/620 (37%), Positives = 334/620 (53%), Gaps = 76/620 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +G LLHGPPG GKT LA+  A +  + +  V   E+VS   GESEQ L  +F+ 
Sbjct: 337  LGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPILKVAATEIVSGLSGESEQQLRALFEQ 396

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    +  T  VLVI ATNR
Sbjct: 397  AVSNAPCILFIDEIDAITPKREVASKDMERRIVAQLLVCMDDLNNLAATAQVLVIGATNR 456

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   M+  L ++
Sbjct: 457  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILRTLCRKMK--LPEA 500

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
             +  +L+  T G+VG         A L+ LR+ +       VL     +   +  S  M 
Sbjct: 501  FDFRHLAHLTPGYVG---------ADLMALRQEAVSCAVDRVLLKLNVMKHKDDQSGDMT 551

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
             +      + E+  D               L    LP             N + +    M
Sbjct: 552  MEGSLV-ELMETEND---------------LKPQDLPDELLRLLELLKDQNSIPEEQLQM 595

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
                    L +E+ DF  A  KV+PSA RE  + VP V W D+G   +++ +L  A+  P
Sbjct: 596  --------LCIEMNDFIVALSKVQPSAKREGFVTVPNVTWSDIGALEDIREELTMAILAP 647

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
             ++ +  K +G   P GIL+ GPPGC KTL+A+AVA+E GLNF++VKGPEL + +VG+SE
Sbjct: 648  LRYPDQVKALGLMTPAGILLAGPPGCGKTLLAKAVANECGLNFISVKGPELLNMYVGQSE 707

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGK-ESDGVSVSDRVMSQLLVELDGLHQRVN 913
             AVR +F +AR +AP +IFFDEIDGL   R K ES   +VSDRV+SQLL E+DG+  R  
Sbjct: 708  SAVRQVFQRARNSAPCVIFFDEIDGLCPQRAKVES---AVSDRVVSQLLTEMDGVESRQQ 764

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK---IPCSSDVNIR 970
            V ++AATNRPD ID A+LRPGR D++L+VG P+  DR  I +   +     P    V++ 
Sbjct: 765  VYILAATNRPDSIDRAILRPGRLDKILFVGLPSPADRFAILKTITKNGTTPPLDVSVSLE 824

Query: 971  ELACLSEGC---TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
             +A     C   +GAD+ L+ REA+I  + + + +          +++ +H + A + V+
Sbjct: 825  AIA-YDPRCDYFSGADLYLLIREASICVLRQEMASHKSGDKKGEVKVSQEHFEEAFKKVK 883

Query: 1019 PSEIHSYKELSAKFQRLVHS 1038
            PS   + KE    +++L  S
Sbjct: 884  PS---TSKEDQMMYEKLRQS 900



 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/294 (38%), Positives = 164/294 (55%), Gaps = 9/294 (3%)

Query: 713  RGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLE---LVDFEKARMKVRPSAMREVILEV 769
            R T+SE+ D+  N + +S G      K    K E    VD E   +  + +  + + L++
Sbjct: 244  RKTISELQDSKDNSLLESEGKRKNRLKRTRRKTEDHQKVDGEIENVLQKKARTQTLELQI 303

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P VK+EDVGG  +V  + +  +    +H E +  +G  PP G L+ GPPGC KTL+A+A+
Sbjct: 304  PTVKFEDVGGN-DVTLKEICKMLIHMRHPEVYHYLGVVPPRGFLLHGPPGCGKTLLAQAI 362

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E  L  L V   E+ S   GESE+ +R+LF +A +NAP I+F DEID +   R  E  
Sbjct: 363  AGELELPILKVAATEIVSGLSGESEQQLRALFEQAVSNAPCILFIDEIDAITPKR--EVA 420

Query: 890  GVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               +  R+++QLLV +D L+       V VI ATNRPD +DPAL R GRFDR + +G P+
Sbjct: 421  SKDMERRIVAQLLVCMDDLNNLAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 480

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            E  RE I R   RK+      + R LA L+ G  GAD+  + +EA   A++  L
Sbjct: 481  EASRERILRTLCRKMKLPEAFDFRHLAHLTPGYVGADLMALRQEAVSCAVDRVL 534



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/270 (38%), Positives = 140/270 (51%), Gaps = 25/270 (9%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKE--YAILKDIIISSSVKSTLSSLGLRPTKGVLL 449
           P+A+ E F  V      DI  L  + +E   AIL  +     VK+    LGL    G+LL
Sbjct: 612 PSAKREGFVTVPNVTWSDIGALEDIREELTMAILAPLRYPDQVKA----LGLMTPAGILL 667

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
            GPPG GKT LA+  A++ G+N  +V GPE+++   G+SE A+ +VF  A  SAP V+F 
Sbjct: 668 AGPPGCGKTLLAKAVANECGLNFISVKGPELLNMYVGQSESAVRQVFQRARNSAPCVIFF 727

Query: 510 DELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
           DE+D + P R      +S R+V+ LL  MDGV     V ++AATNRPDSI+ A+ RPGRL
Sbjct: 728 DEIDGLCPQRAKVESAVSDRVVSQLLTEMDGVESRQQVYILAATNRPDSIDRAILRPGRL 787

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----TH 625
           D+        LF         +PSPA R  IL  +        LD  V   ++A      
Sbjct: 788 DK-------ILF-------VGLPSPADRFAILKTITKNGTTPPLDVSVSLEAIAYDPRCD 833

Query: 626 GFVGADLAALCNEAALVCLRRYSKIQTSSD 655
            F GADL  L  EA++  LR+      S D
Sbjct: 834 YFSGADLYLLIREASICVLRQEMASHKSGD 863


>gi|410985651|ref|XP_003999132.1| PREDICTED: nuclear valosin-containing protein-like isoform 1 [Felis
            catus]
          Length = 854

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 251/675 (37%), Positives = 357/675 (52%), Gaps = 70/675 (10%)

Query: 345  DLTNERSQPQVTESMDHESNAFVI---NHETKVYLYPPLNAVSKSLRE--GTLPNAQIEF 399
            DL +E+S+ +   S   +S    +   N + K  L    N   K L+E  G +  A ++ 
Sbjct: 184  DLADEKSKHKKPGSEREDSKDASLLESNEKRKGRLTRKGNQRKKDLQEVDGEI-QAVLQR 242

Query: 400  QNVQATVEQDISKL-----GGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPG 454
            +     +E  ISK+     GG       +  ++I          LG  P +GVLLHGPPG
Sbjct: 243  KAKAKGLELQISKVKFEDVGGSDTTLKEVCKMLIHMRHPEVYRHLGATPPRGVLLHGPPG 302

Query: 455  TGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDA 514
             GKT LA   A +  + +  V   E+VS   GESEQ L E+F+ A  +AP V+FIDE+DA
Sbjct: 303  CGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDA 362

Query: 515  IAPARKDGGEELSQRMVATLLNLMDGV---CRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
            I P R    +++ +R+VA LL  MD +     T  VLVI ATNRPDS++PALRR GR DR
Sbjct: 363  ITPKRDVASKDMERRIVAQLLTCMDDLNTMAATAQVLVIGATNRPDSLDPALRRAGRFDR 422

Query: 572  EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGA 630
            EI +               +P  A R  IL  L   +   L ++    +L+  T GFVG 
Sbjct: 423  EICL--------------GIPDEASRERILRTLCRKLR--LPETFHFHHLAHLTPGFVG- 465

Query: 631  DLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDC 690
                    A L+ L R + +   S VL         E  +D  ++ +  SR   E+    
Sbjct: 466  --------ADLMALCREAAMCAVSRVLMKLP-----EPRADPEME-ALLSRGGRENGIGT 511

Query: 691  LDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDF 750
               AS      P   L   L L      +++    G                L++EL DF
Sbjct: 512  -KPASEAQELSPQDELQRLLALLRNQDPLSEERLQG----------------LRIELNDF 554

Query: 751  EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
              A   V+PSA RE  + VP V W D+G   +V+ +L  A+  P ++ + F+ +G   P 
Sbjct: 555  IVALSSVQPSAKREGFVTVPNVTWADIGALEDVREELTMAILAPVRNPDQFRALGLVTPA 614

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE+AVR +F +A+ +AP 
Sbjct: 615  GVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 674

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            +IFFDE+D L   R     G SV  RV++QLL E+DGL  R  V ++AATNRPD IDPA+
Sbjct: 675  VIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAI 732

Query: 931  LRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELAC-LSEGC-TGADIS 985
            LRPGR D+ L+VG P   DR  I +   +   K P ++DV++  LA  L   C +GAD+S
Sbjct: 733  LRPGRLDKTLFVGLPPPADRLAILKTITQNGTKPPLAADVSLEALAGDLRCDCYSGADLS 792

Query: 986  LICREAAISAIEENL 1000
             + REA++ A+ + +
Sbjct: 793  ALVREASVCALRQEM 807


>gi|395531442|ref|XP_003767787.1| PREDICTED: nuclear valosin-containing protein-like isoform 2
            [Sarcophilus harrisii]
          Length = 815

 Score =  349 bits (896), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 231/620 (37%), Positives = 334/620 (53%), Gaps = 76/620 (12%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            LG+ P +G LLHGPPG GKT LA+  A +  + +  V   E+VS   GESEQ L  +F+ 
Sbjct: 249  LGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPILKVAATEIVSGLSGESEQQLRALFEQ 308

Query: 499  ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 555
            A  +AP ++FIDE+DAI P R+   +++ +R+VA LL  MD    +  T  VLVI ATNR
Sbjct: 309  AVSNAPCILFIDEIDAITPKREVASKDMERRIVAQLLVCMDDLNNLAATAQVLVIGATNR 368

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PDS++PALRR GR DREI +               +P  A R  IL  L   M+  L ++
Sbjct: 369  PDSLDPALRRAGRFDREICL--------------GIPDEASRERILRTLCRKMK--LPEA 412

Query: 616  -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
             +  +L+  T G+VG         A L+ LR+ +       VL     +   +  S  M 
Sbjct: 413  FDFRHLAHLTPGYVG---------ADLMALRQEAVSCAVDRVLLKLNVMKHKDDQSGDMT 463

Query: 675  QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
             +      + E+  D               L    LP             N + +    M
Sbjct: 464  MEGSLV-ELMETEND---------------LKPQDLPDELLRLLELLKDQNSIPEEQLQM 507

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
                    L +E+ DF  A  KV+PSA RE  + VP V W D+G   +++ +L  A+  P
Sbjct: 508  --------LCIEMNDFIVALSKVQPSAKREGFVTVPNVTWSDIGALEDIREELTMAILAP 559

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
             ++ +  K +G   P GIL+ GPPGC KTL+A+AVA+E GLNF++VKGPEL + +VG+SE
Sbjct: 560  LRYPDQVKALGLMTPAGILLAGPPGCGKTLLAKAVANECGLNFISVKGPELLNMYVGQSE 619

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGK-ESDGVSVSDRVMSQLLVELDGLHQRVN 913
             AVR +F +AR +AP +IFFDEIDGL   R K ES   +VSDRV+SQLL E+DG+  R  
Sbjct: 620  SAVRQVFQRARNSAPCVIFFDEIDGLCPQRAKVES---AVSDRVVSQLLTEMDGVESRQQ 676

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK---IPCSSDVNIR 970
            V ++AATNRPD ID A+LRPGR D++L+VG P+  DR  I +   +     P    V++ 
Sbjct: 677  VYILAATNRPDSIDRAILRPGRLDKILFVGLPSPADRFAILKTITKNGTTPPLDVSVSLE 736

Query: 971  ELACLSEGC---TGADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
             +A     C   +GAD+ L+ REA+I  + + + +          +++ +H + A + V+
Sbjct: 737  AIA-YDPRCDYFSGADLYLLIREASICVLRQEMASHKSGDKKGEVKVSQEHFEEAFKKVK 795

Query: 1019 PSEIHSYKELSAKFQRLVHS 1038
            PS   + KE    +++L  S
Sbjct: 796  PS---TSKEDQMMYEKLRQS 812



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/237 (42%), Positives = 140/237 (59%), Gaps = 6/237 (2%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            L++P VK+EDVGG  +V  + +  +    +H E +  +G  PP G L+ GPPGC KTL+A
Sbjct: 213  LQIPTVKFEDVGGN-DVTLKEICKMLIHMRHPEVYHYLGVVPPRGFLLHGPPGCGKTLLA 271

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +A+A E  L  L V   E+ S   GESE+ +R+LF +A +NAP I+F DEID +   R  
Sbjct: 272  QAIAGELELPILKVAATEIVSGLSGESEQQLRALFEQAVSNAPCILFIDEIDAITPKR-- 329

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            E     +  R+++QLLV +D L+       V VI ATNRPD +DPAL R GRFDR + +G
Sbjct: 330  EVASKDMERRIVAQLLVCMDDLNNLAATAQVLVIGATNRPDSLDPALRRAGRFDREICLG 389

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             P+E  RE I R   RK+      + R LA L+ G  GAD+  + +EA   A++  L
Sbjct: 390  IPDEASRERILRTLCRKMKLPEAFDFRHLAHLTPGYVGADLMALRQEAVSCAVDRVL 446



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/270 (38%), Positives = 140/270 (51%), Gaps = 25/270 (9%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKE--YAILKDIIISSSVKSTLSSLGLRPTKGVLL 449
           P+A+ E F  V      DI  L  + +E   AIL  +     VK+    LGL    G+LL
Sbjct: 524 PSAKREGFVTVPNVTWSDIGALEDIREELTMAILAPLRYPDQVKA----LGLMTPAGILL 579

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
            GPPG GKT LA+  A++ G+N  +V GPE+++   G+SE A+ +VF  A  SAP V+F 
Sbjct: 580 AGPPGCGKTLLAKAVANECGLNFISVKGPELLNMYVGQSESAVRQVFQRARNSAPCVIFF 639

Query: 510 DELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
           DE+D + P R      +S R+V+ LL  MDGV     V ++AATNRPDSI+ A+ RPGRL
Sbjct: 640 DEIDGLCPQRAKVESAVSDRVVSQLLTEMDGVESRQQVYILAATNRPDSIDRAILRPGRL 699

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----TH 625
           D+        LF         +PSPA R  IL  +        LD  V   ++A      
Sbjct: 700 DK-------ILF-------VGLPSPADRFAILKTITKNGTTPPLDVSVSLEAIAYDPRCD 745

Query: 626 GFVGADLAALCNEAALVCLRRYSKIQTSSD 655
            F GADL  L  EA++  LR+      S D
Sbjct: 746 YFSGADLYLLIREASICVLRQEMASHKSGD 775


>gi|66816709|ref|XP_642364.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
 gi|60470410|gb|EAL68390.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
          Length = 886

 Score =  349 bits (895), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 157/291 (53%), Positives = 220/291 (75%), Gaps = 2/291 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +KL + D   A  +V+PS+MREV++E+PKV W D+GGQ  +K +L EA+EWP K+ ++F 
Sbjct: 590  IKLSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFI 649

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP GIL++GPPGCSKTL+A+A+A+E+GLNF+AVKGPEL SKWVGESE+AVR +F 
Sbjct: 650  RMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFK 709

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR N+PSI+FFDEIDGLA  R  E  G    +RV+SQLL E+DG+    NVT+I ATNR
Sbjct: 710  KARQNSPSILFFDEIDGLAISRSGEGSG--AVERVVSQLLTEMDGIQPLTNVTIIGATNR 767

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID A+LR GR DR+LY+ PP+   R+EIF IHL+K+P SSD++I +L+ L++G +GA
Sbjct: 768  PDIIDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKVPHSSDIDINQLSILTDGYSGA 827

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +++ ICREA+I+A++E+++A  I M H  +AI +V+        +    +Q
Sbjct: 828  EVTSICREASIAAMKEDINAKEINMSHFISAIGNVKKGITQEMLDFYKDYQ 878



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 105/255 (41%), Positives = 152/255 (59%), Gaps = 35/255 (13%)

Query: 413 LGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I  S  K   L S G++P KG+LL+GPPGTGKT LAR+ A  +   
Sbjct: 314 IGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQTNAT 373

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           LFT+NG +++ + YG +E+ L ++F  A+Q +P+++FIDELDA+ P R+D   E+ +R+V
Sbjct: 374 LFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSSEVEKRIV 433

Query: 532 ATLLNLMDGVCRTDG--------------------VLVIAATNRPDSIEPALRRPGRLDR 571
            +LL LMDGV  T                      V+VI  TNRPDSI+ ALRRPGR D 
Sbjct: 434 GSLLTLMDGVVSTSDQNDGGGGDNGNGNGNCGGDKVIVIGCTNRPDSIDSALRRPGRFDN 493

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
           EIEI              ++P+   R +IL+  LS + + L   E+  ++  THGFVGAD
Sbjct: 494 EIEI--------------SIPNQQGREQILNIFLSKIPNQLTSQEIAMIASKTHGFVGAD 539

Query: 632 LAALCNEAALVCLRR 646
           + +LC EA+L C  R
Sbjct: 540 IESLCKEASLKCFNR 554



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 127/207 (61%), Gaps = 15/207 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KG+LL+GPPG  KT LA+  A +SG+N   V GPE++S+  GESE+A+ ++F  
Sbjct: 651 MGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKK 710

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A Q++P+++F DE+D +A +R   G    +R+V+ LL  MDG+     V +I ATNRPD 
Sbjct: 711 ARQNSPSILFFDEIDGLAISRSGEGSGAVERVVSQLLTEMDGIQPLTNVTIIGATNRPDI 770

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           I+ A+ R GR+DR           +L  SP   P    R EI +  L  + HS  D ++ 
Sbjct: 771 IDKAILRAGRIDR-----------ILYISP---PDLDARKEIFNIHLKKVPHS-SDIDIN 815

Query: 619 YLSMATHGFVGADLAALCNEAALVCLR 645
            LS+ T G+ GA++ ++C EA++  ++
Sbjct: 816 QLSILTDGYSGAEVTSICREASIAAMK 842



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 124/243 (51%), Gaps = 23/243 (9%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           + ++ +GG      Q+ E ++      +  K  G +PP GIL++GPPG  KTL+AR VA+
Sbjct: 309 LNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVAT 368

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           +       + G ++  K+ G +EK ++ +F  A   +PSIIF DE+D L   R  E +  
Sbjct: 369 QTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKR--EDNSS 426

Query: 892 SVSDRVMSQLLVELDGL--------------------HQRVNVTVIAATNRPDKIDPALL 931
            V  R++  LL  +DG+                         V VI  TNRPD ID AL 
Sbjct: 427 EVEKRIVGSLLTLMDGVVSTSDQNDGGGGDNGNGNGNCGGDKVIVIGCTNRPDSIDSALR 486

Query: 932 RPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICRE 990
           RPGRFD  + +  PN+  RE+I  I L KIP   +   I  +A  + G  GADI  +C+E
Sbjct: 487 RPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMIASKTHGFVGADIESLCKE 546

Query: 991 AAI 993
           A++
Sbjct: 547 ASL 549


>gi|392594468|gb|EIW83792.1| AAA-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
          Length = 801

 Score =  349 bits (895), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 231/609 (37%), Positives = 335/609 (55%), Gaps = 66/609 (10%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G++P +GVLLHGPPG GKT LA   A + G+   +++ P +VS   GESE+ L + FD A
Sbjct: 132  GVQPPRGVLLHGPPGCGKTLLANAIAGELGIPFISISAPSIVSGMSGESEKTLRDTFDEA 191

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 555
             + AP ++FIDE+DA+ P R+    E+ +R+VA  L  MD +   +T+   V+VI ATNR
Sbjct: 192  KRCAPCLLFIDEIDAVTPKRESAQREMERRIVAQFLTCMDDLSWDKTENKPVVVIGATNR 251

Query: 556  PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            PD+++ ALRR GR D EI +               VP    R  IL    S +    L  
Sbjct: 252  PDALDAALRRAGRFDHEIAM--------------GVPDETSRERILRVQCSKLR---LSG 294

Query: 616  EVEY--LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHS-DT 672
              +Y  L+ AT G+VGADLA+L   A ++ ++R    +  +++  + G + E    S DT
Sbjct: 295  SFDYAALARATPGYVGADLASLTGAAGVIAVKRI--FRELAELEAANGVVAELPARSVDT 352

Query: 673  ---MLQDSDCSRNITES--SRDCLDSASPCTS-DLPTSLLSSSLP-LRGTVSEIADNFHN 725
               M+ DS+ S     +    D L S+S   + D P + L + LP L  T++    +   
Sbjct: 353  NEGMVVDSETSTAAASALPPSDLLASSSDDLALDAPFANLVAILPPLPRTIAHFLASHPG 412

Query: 726  GVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKT 785
             +S+S        +   L+L   DF  A   V+PS+ RE     P V W  +G     + 
Sbjct: 413  PLSES--------QLEPLQLTQADFTAALRTVQPSSTREGFSTAPAVTWSSIGSLHATRE 464

Query: 786  QLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPEL 845
            +L  A+  P +  E F+++G R   G+LM+GPPGC KTL+ARAVA E+  NF++VKGPE+
Sbjct: 465  ELGMAIVQPIRRPEVFRQVGIRGGCGVLMWGPPGCGKTLLARAVAGESKANFISVKGPEV 524

Query: 846  FSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVE 904
             +K+VGESE+AVR +FA+ARA+AP I+FFDE+D L   R    D +S S  RV++ LL E
Sbjct: 525  LNKYVGESERAVRQIFARARASAPCIVFFDELDALVPRR---DDSLSESSARVVNTLLTE 581

Query: 905  LDGLHQRVNVT-----VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR 959
            LDGL    + T     VI ATNRPD IDPA++RPGR D+LLYV  P+   R E+ R  + 
Sbjct: 582  LDGLDTSRSATSAPVYVIGATNRPDMIDPAMVRPGRLDKLLYVDLPDRDGRAEVLRALVL 641

Query: 960  KIPCSS----------DVNIRELACL----SEGCTGADISLICREAAISAIEENLDASRI 1005
                            + ++ E+  L     +G +GADI+ + REA + A+   L   RI
Sbjct: 642  SSSVPLSSSDGTNEGIEKSLTEIEALVQDRCDGFSGADIAALVREAGVVALRRML--GRI 699

Query: 1006 TMQHLKTAI 1014
             M   + A+
Sbjct: 700  EMDEARDAV 708



 Score =  166 bits (419), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 163/315 (51%), Gaps = 21/315 (6%)

Query: 691 LDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHN----GVSDSSGGMFMSEKGCALKLE 746
           ++S     S +PT   SSS PL  TV E  D   +      SDS+       K  +++ E
Sbjct: 25  INSTPDAPSPIPTPPASSSRPL--TVEEAHDESSSRSQLAPSDSTKPPSTKRKIRSIRTE 82

Query: 747 LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
             D ++A++            E P  +  D+GG      +++E V  P  H E +   G 
Sbjct: 83  --DAKRAKVAA-------TNHEPPSARLSDLGGVDASVEKMLELVAMPLCHPEIYMHTGV 133

Query: 807 RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
           +PP G+L+ GPPGC KTL+A A+A E G+ F+++  P + S   GESEK +R  F +A+ 
Sbjct: 134 QPPRGVLLHGPPGCGKTLLANAIAGELGIPFISISAPSIVSGMSGESEKTLRDTFDEAKR 193

Query: 867 NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLH----QRVNVTVIAATNR 922
            AP ++F DEID +   R  ES    +  R+++Q L  +D L     +   V VI ATNR
Sbjct: 194 CAPCLLFIDEIDAVTPKR--ESAQREMERRIVAQFLTCMDDLSWDKTENKPVVVIGATNR 251

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +D AL R GRFD  + +G P+ET RE I R+   K+  S   +   LA  + G  GA
Sbjct: 252 PDALDAALRRAGRFDHEIAMGVPDETSRERILRVQCSKLRLSGSFDYAALARATPGYVGA 311

Query: 983 DISLICREAAISAIE 997
           D++ +   A + A++
Sbjct: 312 DLASLTGAAGVIAVK 326


>gi|221507884|gb|EEE33471.1| calmodulin-binding protein, putative [Toxoplasma gondii VEG]
          Length = 746

 Score =  348 bits (894), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 200/506 (39%), Positives = 288/506 (56%), Gaps = 74/506 (14%)

Query: 506  VVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRR 565
            ++FIDE+DA+ P R++   E+ +R V  LL+ +DG+     + V+AATN P  ++ A+RR
Sbjct: 239  LLFIDEIDAVCPKREEA-TEVGRRAVCALLSCLDGIATDGSLFVLAATNHPYLLDDAIRR 297

Query: 566  PGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH 625
             GRL+R+IE+               VP+  +R EIL  LL  + H+L D ++  LS    
Sbjct: 298  AGRLERDIEV--------------GVPTAEERREILAKLLESVPHNLRDEDIHELSGLCQ 343

Query: 626  GFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITE 685
             FV ADL  L   AA   L+ +  I+TS  +                           ++
Sbjct: 344  AFVPADLRLLVTTAATQALKAFLPIETSGGM--------------------------PSD 377

Query: 686  SSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKL 745
             +RD L      T  +P +L                             F+S++   + L
Sbjct: 378  DTRDELQGGEEATESVPGAL----------------------------AFLSKENKPVTL 409

Query: 746  ELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIG 805
            +   F +A   V+PSA++ V +EVP+VKW+++GG   VK  L E VEWP K+   F+++ 
Sbjct: 410  K--HFRRALRHVKPSALKSVAIEVPQVKWDEIGGYASVKKSLQECVEWPLKYAHLFRQLK 467

Query: 806  TRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR 865
              PP G+L++GPPGCSKT+MA+AVA+E+ +NF++VKGPELFSKWVGESE+AVR +F KAR
Sbjct: 468  VSPPRGVLLYGPPGCSKTMMAKAVATESKMNFISVKGPELFSKWVGESERAVREVFRKAR 527

Query: 866  ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDK 925
             NAP +IFFDE+D +   R +  D   V  RV+SQLL E+DG+     V VIAATNRPD 
Sbjct: 528  QNAPCVIFFDEVDAMGGDR-ETGDAGGVDSRVLSQLLNEMDGIGPVREVIVIAATNRPDL 586

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADIS 985
            +D ALLRPGR DRL+YV  P+   R EI    L+ +P S +V    LA  + G +GA+I 
Sbjct: 587  LDAALLRPGRLDRLVYVPLPDWEARREIVVKMLKNMPVSLEVCADSLASATHGYSGAEIV 646

Query: 986  LICREAAISAIEENLDASRITMQHLK 1011
            +ICREA+++A+ E +  +R T Q L+
Sbjct: 647  MICREASMAAVREAV--ARYTDQQLQ 670



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 141/252 (55%), Gaps = 16/252 (6%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           L + P +GVLL+GPPG  KT +A+  A +S +N  +V GPE+ S+  GESE+A+ EVF  
Sbjct: 466 LKVSPPRGVLLYGPPGCSKTMMAKAVATESKMNFISVKGPELFSKWVGESERAVREVFRK 525

Query: 499 ASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
           A Q+AP V+F DE+DA+   R+ G    +  R+++ LLN MDG+     V+VIAATNRPD
Sbjct: 526 ARQNAPCVIFFDEVDAMGGDRETGDAGGVDSRVLSQLLNEMDGIGPVREVIVIAATNRPD 585

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            ++ AL RPGRLDR + + +              P    R EI+  +L  M  S L+   
Sbjct: 586 LLDAALLRPGRLDRLVYVPL--------------PDWEARREIVVKMLKNMPVS-LEVCA 630

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDS 677
           + L+ ATHG+ GA++  +C EA++  +R      T   + H   + F  +         S
Sbjct: 631 DSLASATHGYSGAEIVMICREASMAAVREAVARYTDQQLQHQRCSAFSEKVELKLSTDKS 690

Query: 678 DCSRNITESSRD 689
           + ++ + ESS D
Sbjct: 691 ERTQCVQESSDD 702



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 40/192 (20%)

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
            +++F DEID   A+  K  +   V  R +  LL  LDG+    ++ V+AATN P  +D A
Sbjct: 238  TLLFIDEID---AVCPKREEATEVGRRAVCALLSCLDGIATDGSLFVLAATNHPYLLDDA 294

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLIC 988
            + R GR +R + VG P   +R EI    L  +P +  D +I EL+ L +    AD+ L+ 
Sbjct: 295  IRRAGRLERDIEVGVPTAEERREILAKLLESVPHNLRDEDIHELSGLCQAFVPADLRLLV 354

Query: 989  REAAISAIEENL----------DASR--------------------------ITMQHLKT 1012
              AA  A++  L          D +R                          +T++H + 
Sbjct: 355  TTAATQALKAFLPIETSGGMPSDDTRDELQGGEEATESVPGALAFLSKENKPVTLKHFRR 414

Query: 1013 AIRHVQPSEIHS 1024
            A+RHV+PS + S
Sbjct: 415  ALRHVKPSALKS 426



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P+     VGG   V  +LM ++  P    + F+  G  PP G+L++GPPG  KT +ARA+
Sbjct: 5   PRGGLNRVGGLHRVLPELMWSLILPLLRPDLFQAYGVLPPKGVLLYGPPGSGKTHLARAL 64

Query: 830 ASE 832
           A E
Sbjct: 65  AEE 67



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)

Query: 410 ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           ++++GGL +    L   +I   ++  L  + G+ P KGVLL+GPPG+GKT LAR  A + 
Sbjct: 9   LNRVGGLHRVLPELMWSLILPLLRPDLFQAYGVLPPKGVLLYGPPGSGKTHLARALAEEI 68

Query: 469 GVNLFTVN 476
            V    VN
Sbjct: 69  QVVAEEVN 76


>gi|154305492|ref|XP_001553148.1| hypothetical protein BC1G_08515 [Botryotinia fuckeliana B05.10]
          Length = 778

 Score =  348 bits (894), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 225/608 (37%), Positives = 337/608 (55%), Gaps = 74/608 (12%)

Query: 409  DIS--KLGGLSKEYAILKDIIISSSV-KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCA 465
            DIS   LGG+      L +++    +   T    G++P +GVLLHGPPG GKT +A   A
Sbjct: 183  DISLENLGGVDNVIEELNELVAMPMLYPETYIRTGIQPPRGVLLHGPPGCGKTMIANAFA 242

Query: 466  HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE 525
             + GV+   ++ P +V+   GESE+ + +VFD A + AP +VFIDE+D I   R+    E
Sbjct: 243  AEIGVSFIPISAPSLVAGMSGESEKKIRDVFDEAKRMAPCLVFIDEIDVIMGKRESAQRE 302

Query: 526  LSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
            + +R+VA +L  MD +   +T G  V++IAATNRPDS++PALRR GR ++EI +      
Sbjct: 303  MEKRIVAQMLTSMDDMALEKTGGKPVIIIAATNRPDSLDPALRRAGRFNKEINL------ 356

Query: 582  SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEA 639
                     VP+ A R +IL AL   +   +L  +  + ++A  T GFVGADL       
Sbjct: 357  --------GVPNEAAREKILRALTQKL---VLTDDFNFHALAKMTPGFVGADL------- 398

Query: 640  ALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTS 699
                          +DV+   GT        + M +  +  +  T S+ + LD+  P   
Sbjct: 399  --------------NDVVSVAGT--------EAMKRMMEALKQRTASTME-LDTPLPSA- 434

Query: 700  DLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRP 759
               TS+   +  L+ + SE      + V+++ G    S       ++  DF  A  KV+P
Sbjct: 435  ---TSMELDTPILKDSTSEALLVLRSLVANAGG----SAPDGDFSIKYTDFLAAIPKVQP 487

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            SA RE    +P   W  VG   EV+ QL  A+  P K  E+F R+G   PTG+L++GPPG
Sbjct: 488  SAKREGFATIPDTTWAHVGALHEVREQLEMAIVEPIKRPESFARVGITAPTGVLLWGPPG 547

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
            C KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F +AR++ P I+FFDE+D 
Sbjct: 548  CGKTLLAKAVANESKANFISIKGPELLNKYVGESERAVRQVFERARSSVPCILFFDELDA 607

Query: 880  LAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDR 938
            L     K  D +S  S +V++ LL ELDGL  R  + V+ ATNRPD IDPA+LRPGR   
Sbjct: 608  LVP---KREDSLSEASSKVVNTLLTELDGLSNRAGIYVVGATNRPDMIDPAMLRPGRLGT 664

Query: 939  LLYVGPPNETDREEIFRIHLRK-IPCSSDVNIRELACLSE-----GCTGADISLICREAA 992
             ++V  P   +R EI +   RK +P +S   +  L  ++      G +GAD+  + + AA
Sbjct: 665  SVFVDLPTPDERVEILKALYRKALPLASAQEVEALGPVARDERCNGYSGADLGNLHQAAA 724

Query: 993  ISAIEENL 1000
            ++A++  +
Sbjct: 725  VAALKREM 732



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 91/236 (38%), Positives = 140/236 (59%), Gaps = 8/236 (3%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            +  E++GG   V  +L E V  P  + E + R G +PP G+L+ GPPGC KT++A A A+
Sbjct: 184  ISLENLGGVDNVIEELNELVAMPMLYPETYIRTGIQPPRGVLLHGPPGCGKTMIANAFAA 243

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK-ESDG 890
            E G++F+ +  P L +   GESEK +R +F +A+  AP ++F DEID    I GK ES  
Sbjct: 244  EIGVSFIPISAPSLVAGMSGESEKKIRDVFDEAKRMAPCLVFIDEID---VIMGKRESAQ 300

Query: 891  VSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
              +  R+++Q+L  +D +         V +IAATNRPD +DPAL R GRF++ + +G PN
Sbjct: 301  REMEKRIVAQMLTSMDDMALEKTGGKPVIIIAATNRPDSLDPALRRAGRFNKEINLGVPN 360

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
            E  RE+I R   +K+  + D N   LA ++ G  GAD++ +   A   A++  ++A
Sbjct: 361  EAAREKILRALTQKLVLTDDFNFHALAKMTPGFVGADLNDVVSVAGTEAMKRMMEA 416


>gi|347828570|emb|CCD44267.1| similar to ribosome biogenesis ATPase RIX7 [Botryotinia fuckeliana]
          Length = 781

 Score =  348 bits (894), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 225/608 (37%), Positives = 337/608 (55%), Gaps = 74/608 (12%)

Query: 409  DIS--KLGGLSKEYAILKDIIISSSV-KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCA 465
            DIS   LGG+      L +++    +   T    G++P +GVLLHGPPG GKT +A   A
Sbjct: 186  DISLENLGGVDNVIEELNELVAMPMLYPETYIRTGIQPPRGVLLHGPPGCGKTMIANAFA 245

Query: 466  HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE 525
             + GV+   ++ P +V+   GESE+ + +VFD A + AP +VFIDE+D I   R+    E
Sbjct: 246  AEIGVSFIPISAPSLVAGMSGESEKKIRDVFDEAKRMAPCLVFIDEIDVIMGKRESAQRE 305

Query: 526  LSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
            + +R+VA +L  MD +   +T G  V++IAATNRPDS++PALRR GR ++EI +      
Sbjct: 306  MEKRIVAQMLTSMDDMALEKTGGKPVIIIAATNRPDSLDPALRRAGRFNKEINL------ 359

Query: 582  SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEA 639
                     VP+ A R +IL AL   +   +L  +  + ++A  T GFVGADL       
Sbjct: 360  --------GVPNEAAREKILRALTQKL---VLTDDFNFHALAKMTPGFVGADL------- 401

Query: 640  ALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTS 699
                          +DV+   GT        + M +  +  +  T S+ + LD+  P   
Sbjct: 402  --------------NDVVSVAGT--------EAMKRMMEALKQRTASTME-LDTPLPSA- 437

Query: 700  DLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRP 759
               TS+   +  L+ + SE      + V+++ G    S       ++  DF  A  KV+P
Sbjct: 438  ---TSMELDTPILKDSTSEALLVLRSLVANAGG----SAPDGDFSIKYTDFLAAIPKVQP 490

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            SA RE    +P   W  VG   EV+ QL  A+  P K  E+F R+G   PTG+L++GPPG
Sbjct: 491  SAKREGFATIPDTTWAHVGALHEVREQLEMAIVEPIKRPESFARVGITAPTGVLLWGPPG 550

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
            C KTL+A+AVA+E+  NF+++KGPEL +K+VGESE+AVR +F +AR++ P I+FFDE+D 
Sbjct: 551  CGKTLLAKAVANESKANFISIKGPELLNKYVGESERAVRQVFERARSSVPCILFFDELDA 610

Query: 880  LAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDR 938
            L     K  D +S  S +V++ LL ELDGL  R  + V+ ATNRPD IDPA+LRPGR   
Sbjct: 611  LVP---KREDSLSEASSKVVNTLLTELDGLSNRAGIYVVGATNRPDMIDPAMLRPGRLGT 667

Query: 939  LLYVGPPNETDREEIFRIHLRK-IPCSSDVNIRELACLSE-----GCTGADISLICREAA 992
             ++V  P   +R EI +   RK +P +S   +  L  ++      G +GAD+  + + AA
Sbjct: 668  SVFVDLPTPDERVEILKALYRKALPLASAQEVEALGPVARDERCNGYSGADLGNLHQAAA 727

Query: 993  ISAIEENL 1000
            ++A++  +
Sbjct: 728  VAALKREM 735



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 91/236 (38%), Positives = 140/236 (59%), Gaps = 8/236 (3%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            +  E++GG   V  +L E V  P  + E + R G +PP G+L+ GPPGC KT++A A A+
Sbjct: 187  ISLENLGGVDNVIEELNELVAMPMLYPETYIRTGIQPPRGVLLHGPPGCGKTMIANAFAA 246

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK-ESDG 890
            E G++F+ +  P L +   GESEK +R +F +A+  AP ++F DEID    I GK ES  
Sbjct: 247  EIGVSFIPISAPSLVAGMSGESEKKIRDVFDEAKRMAPCLVFIDEID---VIMGKRESAQ 303

Query: 891  VSVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
              +  R+++Q+L  +D +         V +IAATNRPD +DPAL R GRF++ + +G PN
Sbjct: 304  REMEKRIVAQMLTSMDDMALEKTGGKPVIIIAATNRPDSLDPALRRAGRFNKEINLGVPN 363

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA 1002
            E  RE+I R   +K+  + D N   LA ++ G  GAD++ +   A   A++  ++A
Sbjct: 364  EAAREKILRALTQKLVLTDDFNFHALAKMTPGFVGADLNDVVSVAGTEAMKRMMEA 419


>gi|66812296|ref|XP_640327.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
 gi|74897137|sp|Q54SY2.1|NVL_DICDI RecName: Full=Putative ribosome biogenesis ATPase nvl; AltName:
            Full=Nuclear valosin-containing protein-like
 gi|60468363|gb|EAL66370.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
          Length = 867

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 229/646 (35%), Positives = 331/646 (51%), Gaps = 131/646 (20%)

Query: 437  SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
            S LG+ P +G+LLHGP G GKT LA+  A +  V LF ++  E+ S   GESE  +  +F
Sbjct: 243  SHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLF 302

Query: 497  DSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV--------------- 541
             +A   AP ++FIDE+DAIAP R+   +++ +R+V+ LL  MD +               
Sbjct: 303  SNAIAQAPCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQ 362

Query: 542  -----------------------------------CRTDGVLVIAATNRPDSIEPALRRP 566
                                                +   V+VI ATNRP+S++ ALR  
Sbjct: 363  TEQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIG 422

Query: 567  GRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT-- 624
            GR D+EI +               +P    R +IL  + S M    L++  +Y  +AT  
Sbjct: 423  GRFDKEICL--------------GIPDQTARCKILKVITSKMR---LENNFDYEEIATLT 465

Query: 625  HGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNIT 684
             G+VGAD+  L  EAA   + R   I TS+             G S +    S  + NI 
Sbjct: 466  PGYVGADINLLVKEAATNSVNR---IFTSN-----------LNGASSSSSSSSSSTTNIN 511

Query: 685  ESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALK 744
                            L T LL S  PL                         EK  +L 
Sbjct: 512  NIG-------------LSTELLISKEPLE-----------------------PEKLNSLY 535

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            +E++DF+KA  KV P+A RE    +P V W+DVG    V+ +L  ++  P ++ + +K +
Sbjct: 536  IEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNM 595

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G   P G+LM+GPPGC KTL+A+A+ASE   NF++VKGPEL +K+VGESE+AVR +F +A
Sbjct: 596  GIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRA 655

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
             A++P +IFFDE D LA  RG    G +  ++RV++QLL E+DGL +R  V +IAATNRP
Sbjct: 656  AASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRP 715

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNI----RELACLSEGC 979
            D ID A+ RPGR D+++YV  P+  +R EI +    KIP   DV++     +L C S   
Sbjct: 716  DIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHS--F 773

Query: 980  TGADISLICREAAISAIEENLDAS-----RITMQHLKTAIRHVQPS 1020
            +GAD+SL+ +EAA  AI    D +      +TM+    A+  ++PS
Sbjct: 774  SGADLSLLVKEAANHAISRGFDNNSTEPDTVTMEDFIFALSKIKPS 819



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 141/278 (50%), Gaps = 52/278 (18%)

Query: 769 VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
           +P + + ++GG       + E +E+P  H E +  +G  PP GIL+ GP GC KTL+A+A
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269

Query: 829 VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
           +A E  +   A+   E+ S   GESE  VR+LF+ A A AP IIF DEID +A  R  ES
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR--ES 327

Query: 889 DGVSVSDRVMSQLLVELDGLH--------------------------------------- 909
               +  R++SQLL  +D L+                                       
Sbjct: 328 ASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQQQQQQQDIIEVDSQATTTTTAS 387

Query: 910 -----------QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
                      ++ +V VI ATNRP+ +D AL   GRFD+ + +G P++T R +I ++  
Sbjct: 388 NNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVIT 447

Query: 959 RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            K+   ++ +  E+A L+ G  GADI+L+ +EAA +++
Sbjct: 448 SKMRLENNFDYEEIATLTPGYVGADINLLVKEAATNSV 485



 Score =  152 bits (385), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/276 (36%), Positives = 151/276 (54%), Gaps = 34/276 (12%)

Query: 376 LYPPLNAVSKSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEY--AILKDIIISSSV 432
           LY  +    K+L++  +P A+ E F  +      D+  L G+ +E   +IL+ I      
Sbjct: 534 LYIEMIDFKKALKK-VVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKY 592

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K+    +G+    GVL++GPPG GKT LA+  A +   N  +V GPE++++  GESE+A+
Sbjct: 593 KN----MGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAV 648

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ---RMVATLLNLMDGVCRTDGVLV 549
            +VF  A+ S+P V+F DE DA+AP R  G    +Q   R+V  LL  MDG+ +   V +
Sbjct: 649 RQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFI 708

Query: 550 IAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME 609
           IAATNRPD I+ A+ RPGRLD+ + + +              PSP +R EIL  L     
Sbjct: 709 IAATNRPDIIDAAMCRPGRLDKMVYVPL--------------PSPEERCEILKTLT---- 750

Query: 610 HSL-LDSEVEYLSMAT----HGFVGADLAALCNEAA 640
           H + +  +V+ + + T    H F GADL+ L  EAA
Sbjct: 751 HKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAA 786


>gi|126466018|ref|YP_001041127.1| ATPase AAA [Staphylothermus marinus F1]
 gi|126014841|gb|ABN70219.1| AAA family ATPase, CDC48 subfamily [Staphylothermus marinus F1]
          Length = 733

 Score =  346 bits (888), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 159/303 (52%), Positives = 222/303 (73%), Gaps = 4/303 (1%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            +EK   LK+++ DF +A   V+P+ +RE+ +EVP+V+W D+GG  +VK QL EAVEWP K
Sbjct: 424  AEKLRDLKVKMSDFLEAMKYVQPTLIREIYVEVPEVRWSDIGGLEDVKQQLREAVEWPMK 483

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            H E F+++G  PP GIL+FGPPG  KTL+A+AVA+E+G NF+AV+GPE+ SKWVGESEKA
Sbjct: 484  HPEVFEQMGIEPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESEKA 543

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            +R +F +AR  AP+++FFDEID +A  RG   D   V+DR+++QLL ELDG+     V V
Sbjct: 544  IRQIFRRARQVAPAVVFFDEIDSIAPARGYRHDTSGVTDRIVNQLLTELDGIEPLRKVVV 603

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
            IAATNRPD +DPALLRPGRFDRL+YV PP+   R EIF++H +K+P + DV++ ELA  +
Sbjct: 604  IAATNRPDILDPALLRPGRFDRLIYVPPPDFKARIEIFKVHTKKMPLAPDVDLEELARRT 663

Query: 977  EGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            EG TGADI+ +CREAAI A+ E      + M+H   A++HV PS    ++  Y+ ++ + 
Sbjct: 664  EGYTGADIAAVCREAAILALREEFKVRPVEMKHFLEALKHVPPSLTRTDMERYERMAKEL 723

Query: 1033 QRL 1035
            +R+
Sbjct: 724  KRM 726



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 125/290 (43%), Positives = 183/290 (63%), Gaps = 22/290 (7%)

Query: 755  MKVRPSAMREVILE----VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
            +++R   ++E ++E    +PKV WED+G   E K ++ E VE P KH E FK +G  PP 
Sbjct: 164  IQIRSEPVKEEVIERARMIPKVTWEDIGDLEEAKQKIREIVELPLKHPELFKHLGIEPPK 223

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            GIL++GPPG  KTL+A+A+A+E G  F A+ GPE+ SK+ GESE+ +R +F +A  NAP+
Sbjct: 224  GILLYGPPGTGKTLLAKALANEIGAYFTAINGPEIMSKFYGESEQRLREIFEEAERNAPA 283

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            IIF DEID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL
Sbjct: 284  IIFIDEIDSIAPKR-EEVTG-EVEKRVVAQLLALMDGLKERGKVIVIGATNRPDALDPAL 341

Query: 931  LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICRE 990
             RPGRFDR + + PP++  R EI  +H R +P   DV++ ++A ++ G TGAD++ + +E
Sbjct: 342  RRPGRFDREIEIPPPDKRARREILAVHTRNMPLEEDVDLDKIAEMTHGYTGADLAALVKE 401

Query: 991  AAISAIE----------------ENLDASRITMQHLKTAIRHVQPSEIHS 1024
            AA++A+                 E L   ++ M     A+++VQP+ I  
Sbjct: 402  AAMAALRRFIKEGKIDLTQPIPAEKLRDLKVKMSDFLEAMKYVQPTLIRE 451



 Score =  202 bits (514), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 103/214 (48%), Positives = 139/214 (64%), Gaps = 15/214 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LA+  A++ G     +NGPE++S+ YGESEQ L E+
Sbjct: 214 FKHLGIEPPKGILLYGPPGTGKTLLAKALANEIGAYFTAINGPEIMSKFYGESEQRLREI 273

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 274 FEEAERNAPAIIFIDEIDSIAPKREEVTGEVEKRVVAQLLALMDGLKERGKVIVIGATNR 333

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREIEI                P    R EIL      M     D 
Sbjct: 334 PDALDPALRRPGRFDREIEI--------------PPPDKRARREILAVHTRNMPLE-EDV 378

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +++ ++  THG+ GADLAAL  EAA+  LRR+ K
Sbjct: 379 DLDKIAEMTHGYTGADLAALVKEAAMAALRRFIK 412



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/222 (43%), Positives = 132/222 (59%), Gaps = 21/222 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                +G+ P KG+LL GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ 
Sbjct: 486 EVFEQMGIEPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESEKAIR 545

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           ++F  A Q APAVVF DE+D+IAPAR  +     ++ R+V  LL  +DG+     V+VIA
Sbjct: 546 QIFRRARQVAPAVVFFDEIDSIAPARGYRHDTSGVTDRIVNQLLTELDGIEPLRKVVVIA 605

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGME 609
           ATNRPD ++PAL RPGR DR I                 VP P    R+EI       M 
Sbjct: 606 ATNRPDILDPALLRPGRFDRLI----------------YVPPPDFKARIEIFKVHTKKMP 649

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            +  D ++E L+  T G+ GAD+AA+C EAA++ LR   K++
Sbjct: 650 LA-PDVDLEELARRTEGYTGADIAAVCREAAILALREEFKVR 690


>gi|221483404|gb|EEE21723.1| spermatogenesis associated factor, putative [Toxoplasma gondii GT1]
          Length = 746

 Score =  345 bits (886), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 199/506 (39%), Positives = 287/506 (56%), Gaps = 74/506 (14%)

Query: 506  VVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRR 565
            ++FIDE+DA+ P R++   E+ +R V  LL+ +DG+     + V+AATN P  ++ A+RR
Sbjct: 239  LLFIDEIDAVCPKREEA-TEVGRRAVCALLSCLDGIATDGSLFVLAATNHPYLLDDAIRR 297

Query: 566  PGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH 625
             GRL+R+IE+               VP+  +R EIL  LL  + H+L D ++  LS    
Sbjct: 298  AGRLERDIEV--------------GVPTAEERREILAKLLESVPHNLRDEDIHELSGLCQ 343

Query: 626  GFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITE 685
             FV ADL  L   AA   L+ +  I+TS  +                           ++
Sbjct: 344  AFVPADLRLLVTTAATQALKAFLPIETSGGM--------------------------PSD 377

Query: 686  SSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKL 745
             +RD L      T  +P +L                             F S++   + L
Sbjct: 378  DTRDELQGGEEATESVPGAL----------------------------AFRSKENKPVTL 409

Query: 746  ELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIG 805
            +   F +A   V+PSA++ V +EVP+VKW+++GG   VK  L E VEWP K+   F+++ 
Sbjct: 410  K--HFRRALRHVKPSALKSVAIEVPQVKWDEIGGYASVKKSLQECVEWPLKYAHLFRQLK 467

Query: 806  TRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR 865
              PP G+L++GPPGCSKT+MA+AVA+E+ +NF++VKGPELFSKWVGESE+AVR +F KAR
Sbjct: 468  VSPPRGVLLYGPPGCSKTMMAKAVATESKMNFISVKGPELFSKWVGESERAVREVFRKAR 527

Query: 866  ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDK 925
             NAP +IFFDE+D +   R +  D   V  RV+SQLL E+DG+     V VIAATNRPD 
Sbjct: 528  QNAPCVIFFDEVDAMGGDR-ETGDAGGVDSRVLSQLLNEMDGIGPVREVIVIAATNRPDL 586

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADIS 985
            +D ALLRPGR DRL+YV  P+   R EI    L+ +P S +V    LA  + G +GA+I 
Sbjct: 587  LDAALLRPGRLDRLVYVPLPDWEARREIVVKMLKNMPVSLEVCADSLASATHGYSGAEIV 646

Query: 986  LICREAAISAIEENLDASRITMQHLK 1011
            +ICREA+++A+ E +  +R T + L+
Sbjct: 647  MICREASMAAVREAV--ARYTDEQLQ 670



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 141/252 (55%), Gaps = 16/252 (6%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           L + P +GVLL+GPPG  KT +A+  A +S +N  +V GPE+ S+  GESE+A+ EVF  
Sbjct: 466 LKVSPPRGVLLYGPPGCSKTMMAKAVATESKMNFISVKGPELFSKWVGESERAVREVFRK 525

Query: 499 ASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
           A Q+AP V+F DE+DA+   R+ G    +  R+++ LLN MDG+     V+VIAATNRPD
Sbjct: 526 ARQNAPCVIFFDEVDAMGGDRETGDAGGVDSRVLSQLLNEMDGIGPVREVIVIAATNRPD 585

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            ++ AL RPGRLDR + + +              P    R EI+  +L  M  S L+   
Sbjct: 586 LLDAALLRPGRLDRLVYVPL--------------PDWEARREIVVKMLKNMPVS-LEVCA 630

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDS 677
           + L+ ATHG+ GA++  +C EA++  +R      T   + H   + F  +         S
Sbjct: 631 DSLASATHGYSGAEIVMICREASMAAVREAVARYTDEQLQHQRCSAFSEKVELKLSTDKS 690

Query: 678 DCSRNITESSRD 689
           + ++ + ESS D
Sbjct: 691 ERTQCVQESSDD 702



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 40/192 (20%)

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
            +++F DEID   A+  K  +   V  R +  LL  LDG+    ++ V+AATN P  +D A
Sbjct: 238  TLLFIDEID---AVCPKREEATEVGRRAVCALLSCLDGIATDGSLFVLAATNHPYLLDDA 294

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLIC 988
            + R GR +R + VG P   +R EI    L  +P +  D +I EL+ L +    AD+ L+ 
Sbjct: 295  IRRAGRLERDIEVGVPTAEERREILAKLLESVPHNLRDEDIHELSGLCQAFVPADLRLLV 354

Query: 989  REAAISAIEENL----------DASR--------------------------ITMQHLKT 1012
              AA  A++  L          D +R                          +T++H + 
Sbjct: 355  TTAATQALKAFLPIETSGGMPSDDTRDELQGGEEATESVPGALAFRSKENKPVTLKHFRR 414

Query: 1013 AIRHVQPSEIHS 1024
            A+RHV+PS + S
Sbjct: 415  ALRHVKPSALKS 426



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P+     VGG   V  +LM ++  P    + F+  G  PP G+L++GPPG  KT +ARA+
Sbjct: 5   PRGGLNRVGGLHRVLPELMWSLILPLLRPDLFQAYGVLPPKGVLLYGPPGSGKTHLARAL 64

Query: 830 ASE 832
           A E
Sbjct: 65  AEE 67



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)

Query: 410 ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           ++++GGL +    L   +I   ++  L  + G+ P KGVLL+GPPG+GKT LAR  A + 
Sbjct: 9   LNRVGGLHRVLPELMWSLILPLLRPDLFQAYGVLPPKGVLLYGPPGSGKTHLARALAEEI 68

Query: 469 GVNLFTVN 476
            V    VN
Sbjct: 69  QVVAEEVN 76


>gi|350403271|ref|XP_003486751.1| PREDICTED: spermatogenesis-associated protein 5-like [Bombus
            impatiens]
          Length = 797

 Score =  345 bits (885), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 160/297 (53%), Positives = 220/297 (74%), Gaps = 1/297 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ + +FE A    +PSAM+EV++EVP ++W D+GGQ+++K +L +AVEWP +H E F
Sbjct: 501  SLKVTISNFEHALTVTKPSAMKEVLIEVPNIQWSDIGGQKDLKLKLKQAVEWPLRHPEVF 560

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G  PP G+LMFGPPGCSKT++A+A+A+E+ +NFL +KGPELFSKWVGESEKAVR +F
Sbjct: 561  LRMGITPPKGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVF 620

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESD-GVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR  +PSI+F DEID L + RG  S  G +V +RV++QLL ELDG+    +VT++AAT
Sbjct: 621  RKARQVSPSIVFIDEIDALGSERGSSSSAGSNVQERVLAQLLTELDGVTALGSVTLVAAT 680

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPDKID ALLRPGR DR++YV  P+   R+EIF I LR +P + DV+I++L  L+EG +
Sbjct: 681  NRPDKIDKALLRPGRLDRIIYVALPDYEARQEIFDIKLRNMPIAEDVHIQDLVDLTEGYS 740

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVH 1037
            GA+I  IC EAAI A+EE+L+AS IT +H K A+  + P    S   L  ++   +H
Sbjct: 741  GAEIQAICHEAAIKALEEDLNASIITKEHFKAALAIITPRTPASLINLYNEYMNKIH 797



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 121/209 (57%), Gaps = 18/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P KGVL+ GPPG  KT +A+  A +S VN   + GPE+ S+  GESE+A+ EVF  
Sbjct: 563 MGITPPKGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFRK 622

Query: 499 ASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q +P++VFIDE+DA+   R      G  + +R++A LL  +DGV     V ++AATNR
Sbjct: 623 ARQVSPSIVFIDEIDALGSERGSSSSAGSNVQERVLAQLLTELDGVTALGSVTLVAATNR 682

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+ AL RPGRLDR I +              A+P    R EI    L  M  +  D 
Sbjct: 683 PDKIDKALLRPGRLDRIIYV--------------ALPDYEARQEIFDIKLRNMPIA-EDV 727

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCL 644
            ++ L   T G+ GA++ A+C+EAA+  L
Sbjct: 728 HIQDLVDLTEGYSGAEIQAICHEAAIKAL 756



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 136/245 (55%), Gaps = 18/245 (7%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           I  +GG       +KD++ I   +  ++ +  +  +KG+LL+G  G GK+++A       
Sbjct: 270 IQDIGGYDNVIEDIKDVLNIGLGLYQSIGNFYI--SKGILLYGTSGVGKSAIANALISQY 327

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            +N  T+   ++ S++ GE+E+ L ++F  A   AP+++ I+E+D++ P R     +  +
Sbjct: 328 DINSTTIYSSDIYSKSSGETEKKLQDIFTEAKDKAPSIILIEEIDSLCPKRSTSTTDHER 387

Query: 529 RMVATLLNLMDGVCR-TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           R+++ L  L DG+    D V+++A T++ D I+ +LRRPGR+D+E EI            
Sbjct: 388 RILSQLTALFDGIQNANDNVVILATTSKLDLIDNSLRRPGRIDKEFEIH----------- 436

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
              VP+   R EI   +LS + ++L   +++ ++  THGFVGADL  LC++A L  ++  
Sbjct: 437 ---VPTTNMRAEIFKKMLSKIPNTLSLEDIQNIAFVTHGFVGADLYGLCSQAVLNAVKCQ 493

Query: 648 SKIQT 652
            K  T
Sbjct: 494 QKTNT 498



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 125/220 (56%), Gaps = 15/220 (6%)

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            GIL++G  G  K+ +A A+ S+  +N   +   +++SK  GE+EK ++ +F +A+  APS
Sbjct: 305  GILLYGTSGVGKSAIANALISQYDINSTTIYSSDIYSKSSGETEKKLQDIFTEAKDKAPS 364

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSD---RVMSQLLVELDGLHQ-RVNVTVIAATNRPDKI 926
            II  +EID L   R       S +D   R++SQL    DG+     NV ++A T++ D I
Sbjct: 365  IILIEEIDSLCPKR-----STSTTDHERRILSQLTALFDGIQNANDNVVILATTSKLDLI 419

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDV-NIRELACLSEGCTGADIS 985
            D +L RPGR D+   +  P    R EIF+  L KIP +  + +I+ +A ++ G  GAD+ 
Sbjct: 420  DNSLRRPGRIDKEFEIHVPTTNMRAEIFKKMLSKIPNTLSLEDIQNIAFVTHGFVGADLY 479

Query: 986  LICREAAISAI----EENLDAS-RITMQHLKTAIRHVQPS 1020
             +C +A ++A+    + N D S ++T+ + + A+   +PS
Sbjct: 480  GLCSQAVLNAVKCQQKTNTDLSLKVTISNFEHALTVTKPS 519


>gi|297527311|ref|YP_003669335.1| AAA family ATPase [Staphylothermus hellenicus DSM 12710]
 gi|297256227|gb|ADI32436.1| AAA family ATPase, CDC48 subfamily [Staphylothermus hellenicus DSM
            12710]
          Length = 734

 Score =  345 bits (885), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 159/303 (52%), Positives = 221/303 (72%), Gaps = 4/303 (1%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            +EK   LK+++ DF +A   V+P+ +RE+ +EVP+V+W D+GG  +VK QL EAVEWP K
Sbjct: 425  AEKLRDLKVKMADFLEAMKYVQPTLIREIYVEVPEVRWSDIGGLEDVKQQLREAVEWPMK 484

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            H E F+++G   P GIL+FGPPG  KTL+A+AVA+E+G NF+AV+GPE+ SKWVGESEKA
Sbjct: 485  HPEVFEQMGIEAPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESEKA 544

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            +R +F +AR  AP+++FFDEID +A  RG   D   V+DR+++QLL ELDG+     V V
Sbjct: 545  IRQIFRRARQVAPAVVFFDEIDSIAPARGYRHDTSGVTDRIVNQLLTELDGIEPLRKVVV 604

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
            IAATNRPD +DPALLRPGRFDRL+YV PP+   R EIF++H +K+P + DV++ ELA  +
Sbjct: 605  IAATNRPDILDPALLRPGRFDRLIYVPPPDFKARIEIFKVHTKKMPLAPDVDLEELARRT 664

Query: 977  EGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP----SEIHSYKELSAKF 1032
            EG TGADI+ +CREAAI A+ E      + M+H   A++HV P    S+I  Y+ ++ + 
Sbjct: 665  EGYTGADIAAVCREAAILALREEFKVRPVEMKHFLEALKHVPPSLTGSDIERYERMAKEL 724

Query: 1033 QRL 1035
            +R+
Sbjct: 725  KRM 727



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/294 (42%), Positives = 184/294 (62%), Gaps = 22/294 (7%)

Query: 751  EKARMKVRPSAMREVILE----VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
            ++  +++R   ++E ++E    +PKV WED+G   E K ++ E VE P KH E FK +G 
Sbjct: 161  DETEIQIRSEPVKEEVIERARMIPKVTWEDIGDLEEAKQKIREIVELPLKHPELFKHLGI 220

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
             PP GIL+ GPPG  KTL+A+A+A+E G  F A+ GPE+ SK+ GESE+ +R +F +A  
Sbjct: 221  EPPKGILLHGPPGTGKTLLAKALANEIGAYFTAINGPEIMSKFYGESEQRLREIFEEAER 280

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
            NAP+IIF DEID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRP+ +
Sbjct: 281  NAPAIIFIDEIDSIAPKR-EEVTG-EVEKRVVAQLLALMDGLKERGKVIVIGATNRPEAL 338

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            DPAL RPGRFDR + + PP++  R EI  +H R +P   DV++ ++A ++ G TGAD++ 
Sbjct: 339  DPALRRPGRFDREIEIPPPDKRARREILAVHTRNMPLEEDVDLDKIAEMTHGYTGADLAA 398

Query: 987  ICREAAISAIE----------------ENLDASRITMQHLKTAIRHVQPSEIHS 1024
            + +EAA++A+                 E L   ++ M     A+++VQP+ I  
Sbjct: 399  LVKEAAMAALRRFIKEGKIDLTQSIPAEKLRDLKVKMADFLEAMKYVQPTLIRE 452



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 103/214 (48%), Positives = 139/214 (64%), Gaps = 15/214 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LLHGPPGTGKT LA+  A++ G     +NGPE++S+ YGESEQ L E+
Sbjct: 215 FKHLGIEPPKGILLHGPPGTGKTLLAKALANEIGAYFTAINGPEIMSKFYGESEQRLREI 274

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 275 FEEAERNAPAIIFIDEIDSIAPKREEVTGEVEKRVVAQLLALMDGLKERGKVIVIGATNR 334

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREIEI                P    R EIL      M     D 
Sbjct: 335 PEALDPALRRPGRFDREIEI--------------PPPDKRARREILAVHTRNMPLE-EDV 379

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +++ ++  THG+ GADLAAL  EAA+  LRR+ K
Sbjct: 380 DLDKIAEMTHGYTGADLAALVKEAAMAALRRFIK 413



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/222 (43%), Positives = 131/222 (59%), Gaps = 21/222 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                +G+   KG+LL GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ 
Sbjct: 487 EVFEQMGIEAPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESEKAIR 546

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           ++F  A Q APAVVF DE+D+IAPAR  +     ++ R+V  LL  +DG+     V+VIA
Sbjct: 547 QIFRRARQVAPAVVFFDEIDSIAPARGYRHDTSGVTDRIVNQLLTELDGIEPLRKVVVIA 606

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGME 609
           ATNRPD ++PAL RPGR DR I                 VP P    R+EI       M 
Sbjct: 607 ATNRPDILDPALLRPGRFDRLI----------------YVPPPDFKARIEIFKVHTKKMP 650

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
            +  D ++E L+  T G+ GAD+AA+C EAA++ LR   K++
Sbjct: 651 LA-PDVDLEELARRTEGYTGADIAAVCREAAILALREEFKVR 691


>gi|340728362|ref|XP_003402494.1| PREDICTED: spermatogenesis-associated protein 5-like [Bombus
            terrestris]
          Length = 797

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/297 (53%), Positives = 220/297 (74%), Gaps = 1/297 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ + +FE A    +PSAM+EV++EVP ++W D+GGQ+++K +L +AVEWP +H E F
Sbjct: 501  SLKVTISNFEHALTVTKPSAMKEVLIEVPNIQWSDIGGQKDLKLKLKQAVEWPLRHPEVF 560

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G  PP G+LMFGPPGCSKT++A+A+A+E+ +NFL +KGPELFSKWVGESEKAVR +F
Sbjct: 561  LRMGITPPKGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVF 620

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESD-GVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR  +PSI+F DEID L + RG  S  G +V +RV++QLL ELDG+    +VT++AAT
Sbjct: 621  RKARQVSPSIVFIDEIDALGSERGSSSSAGSNVQERVLAQLLTELDGVTALGSVTLVAAT 680

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPDKID ALLRPGR DR++YV  P+   R+EIF I LR +P + DV+I++L  L+EG +
Sbjct: 681  NRPDKIDKALLRPGRLDRIIYVALPDYEARQEIFDIKLRNMPIAEDVHIQDLVDLTEGYS 740

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVH 1037
            GA+I  IC EAAI A+EE+L+A+ IT +H K A+  + P    S   L  ++   +H
Sbjct: 741  GAEIQAICHEAAIKALEEDLNATIITKEHFKAALAIITPRTPASLINLYNEYMNKIH 797



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 121/209 (57%), Gaps = 18/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P KGVL+ GPPG  KT +A+  A +S VN   + GPE+ S+  GESE+A+ EVF  
Sbjct: 563 MGITPPKGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFRK 622

Query: 499 ASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q +P++VFIDE+DA+   R      G  + +R++A LL  +DGV     V ++AATNR
Sbjct: 623 ARQVSPSIVFIDEIDALGSERGSSSSAGSNVQERVLAQLLTELDGVTALGSVTLVAATNR 682

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+ AL RPGRLDR I +              A+P    R EI    L  M  +  D 
Sbjct: 683 PDKIDKALLRPGRLDRIIYV--------------ALPDYEARQEIFDIKLRNMPIA-EDV 727

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCL 644
            ++ L   T G+ GA++ A+C+EAA+  L
Sbjct: 728 HIQDLVDLTEGYSGAEIQAICHEAAIKAL 756



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 136/245 (55%), Gaps = 18/245 (7%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           I  +GG       +KD++ I   +  ++ +  +  +KG+LL+G  G GK+++A       
Sbjct: 270 IQDIGGYDNVIEDIKDVLDIGLGLYQSIGNFYI--SKGILLYGTSGVGKSAIANALISQY 327

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            +N  T+   ++ S++ GE+E+ L ++F  A   AP+++ I+E+D++ P R     +  +
Sbjct: 328 NINSTTIYSSDIYSKSLGETEKKLQDIFMEAKDKAPSIILIEEIDSLCPKRSTSSTDHER 387

Query: 529 RMVATLLNLMDGVCR-TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           R+++ L  L DG+    D V+++A T++ D ++ +LRRPGR+D+E EI            
Sbjct: 388 RILSQLTALFDGIQNANDNVVILATTSKLDLVDNSLRRPGRIDKEFEIH----------- 436

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
              VP+   R EI   +LS + ++L   +++ ++  THGFVGADL  LC++A L  ++  
Sbjct: 437 ---VPTTNMRAEIFKKMLSKIPNTLSLEDIQNIAFVTHGFVGADLYGLCSQAVLNSVKCQ 493

Query: 648 SKIQT 652
            K  T
Sbjct: 494 QKTNT 498



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 124/217 (57%), Gaps = 9/217 (4%)

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            GIL++G  G  K+ +A A+ S+  +N   +   +++SK +GE+EK ++ +F +A+  APS
Sbjct: 305  GILLYGTSGVGKSAIANALISQYNINSTTIYSSDIYSKSLGETEKKLQDIFMEAKDKAPS 364

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ-RVNVTVIAATNRPDKIDPA 929
            II  +EID L   R   S       R++SQL    DG+     NV ++A T++ D +D +
Sbjct: 365  IILIEEIDSLCPKRSTSS--TDHERRILSQLTALFDGIQNANDNVVILATTSKLDLVDNS 422

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDV-NIRELACLSEGCTGADISLIC 988
            L RPGR D+   +  P    R EIF+  L KIP +  + +I+ +A ++ G  GAD+  +C
Sbjct: 423  LRRPGRIDKEFEIHVPTTNMRAEIFKKMLSKIPNTLSLEDIQNIAFVTHGFVGADLYGLC 482

Query: 989  REAAISAI----EENLDAS-RITMQHLKTAIRHVQPS 1020
             +A ++++    + N D S ++T+ + + A+   +PS
Sbjct: 483  SQAVLNSVKCQQKTNTDLSLKVTISNFEHALTVTKPS 519


>gi|336121507|ref|YP_004576282.1| AAA family ATPase [Methanothermococcus okinawensis IH1]
 gi|334856028|gb|AEH06504.1| AAA family ATPase, CDC48 subfamily [Methanothermococcus okinawensis
            IH1]
          Length = 746

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 154/296 (52%), Positives = 228/296 (77%), Gaps = 4/296 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF++A  +V PSA+REV++EVP VKW+D+GG  EVK  L EAVEWP K++E F+
Sbjct: 434  IEVTMQDFKEALKEVEPSALREVLVEVPNVKWDDIGGLEEVKQDLKEAVEWPLKYKEVFE 493

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G RPP G+L+FGPPG  KTL+A+AVA+E+  NF++VKGPE+FSKWVGESEKA+R +F 
Sbjct: 494  KMGIRPPKGVLLFGPPGTGKTLLAKAVANESQANFISVKGPEIFSKWVGESEKAIREIFR 553

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+++FFDEID +A  RG +  G  V+++V++QLL ELDGL +  +V +IAATNR
Sbjct: 554  KARQAAPTVVFFDEIDSIAPRRGSDIGGSGVAEKVVNQLLTELDGLEEPKDVVIIAATNR 613

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGR DR++ V  P++  R EI ++H +K+P + DV++++LA  +EG TGA
Sbjct: 614  PDILDPALLRPGRLDRIVLVPVPDKKARYEILKVHTKKMPLAEDVDLKKLAEKTEGYTGA 673

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            D+  +CREAA+ A+ ENL A ++ ++H + A++ V+PS    E++ YK+L+ ++ R
Sbjct: 674  DLEAVCREAAMIALRENLKAEKVELRHFEEALKKVRPSVKKEEMNLYKKLAEEYGR 729



 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 123/296 (41%), Positives = 187/296 (63%), Gaps = 20/296 (6%)

Query: 745  LELVDFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            +++ ++    +K  P S ++E   ++P + +ED+GG RE   ++ E VE P ++ E F +
Sbjct: 164  VKITEYTTVELKTEPVSELKET--KIPDISYEDIGGLREEVKKIREMVELPMRYPELFDK 221

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+ +R +F +
Sbjct: 222  LGIEPPKGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEE 281

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            A   +PSI+F DEID +A  R + S    V  R+++QLL  +DGL  R  V VIAATNRP
Sbjct: 282  AEEESPSIVFIDEIDAIAPKRDEASG--EVERRMVAQLLTLMDGLESRGQVVVIAATNRP 339

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            D +DPAL RPGRFDR + +G P+   R+EI +IH R +P + DV++  LA ++ G  GAD
Sbjct: 340  DALDPALRRPGRFDREITIGVPDRKGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGAD 399

Query: 984  ISLICREAAISAI---------------EENLDASRITMQHLKTAIRHVQPSEIHS 1024
            ++ +C+EAA+  +               +E LD   +TMQ  K A++ V+PS +  
Sbjct: 400  LAALCKEAAMKTLRRLLPDIDLEKEEIPKEILDKIEVTMQDFKEALKEVEPSALRE 455



 Score =  219 bits (559), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 115/241 (47%), Positives = 157/241 (65%), Gaps = 18/241 (7%)

Query: 409 DIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCA 465
           DIS   +GGL +E   +++++ +          LG+ P KGVLL GPPGTGKT LA+  A
Sbjct: 189 DISYEDIGGLREEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVA 248

Query: 466 HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE 525
           +++G N +T+NGPE++S+  GE+E+ L ++F+ A + +P++VFIDE+DAIAP R +   E
Sbjct: 249 NEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEEESPSIVFIDEIDAIAPKRDEASGE 308

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           + +RMVA LL LMDG+     V+VIAATNRPD+++PALRRPGR DREI I          
Sbjct: 309 VERRMVAQLLTLMDGLESRGQVVVIAATNRPDALDPALRRPGRFDREITI---------- 358

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                VP    R EIL      M  +  D +++YL+  THGFVGADLAALC EAA+  LR
Sbjct: 359 ----GVPDRKGRKEILQIHTRNMPLA-EDVDLDYLADVTHGFVGADLAALCKEAAMKTLR 413

Query: 646 R 646
           R
Sbjct: 414 R 414



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/236 (42%), Positives = 141/236 (59%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    LK+ +      K     +G+RP KGVLL GPPGTGKT LA+  A++S  N
Sbjct: 468 IGGLEEVKQDLKEAVEWPLKYKEVFEKMGIRPPKGVLLFGPPGTGKTLLAKAVANESQAN 527

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD--GGEELSQR 529
             +V GPE+ S+  GESE+A+ E+F  A Q+AP VVF DE+D+IAP R    GG  ++++
Sbjct: 528 FISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVVFFDEIDSIAPRRGSDIGGSGVAEK 587

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL  +DG+     V++IAATNRPD ++PAL RPGRLDR + +              
Sbjct: 588 VVNQLLTELDGLEEPKDVVIIAATNRPDILDPALLRPGRLDRIVLV-------------- 633

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            VP    R EIL      M  +  D +++ L+  T G+ GADL A+C EAA++ LR
Sbjct: 634 PVPDKKARYEILKVHTKKMPLA-EDVDLKKLAEKTEGYTGADLEAVCREAAMIALR 688


>gi|440798212|gb|ELR19280.1| ATPase, AAA domain containing protein [Acanthamoeba castellanii str.
            Neff]
          Length = 882

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 165/290 (56%), Positives = 210/290 (72%), Gaps = 1/290 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D   A   VRPS +REV+++VPKV+W D+GGQ + K +L EAVEWP KH EAFKR+G RP
Sbjct: 589  DMSSALKVVRPSTLREVLVDVPKVQWSDIGGQDDTKQKLKEAVEWPLKHPEAFKRMGIRP 648

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPGCSKTLMA+A+A+E+G NF+AVKGPELFSKWVGESE+AVR +F KARA A
Sbjct: 649  PRGILLYGPPGCSKTLMAKALATESGANFIAVKGPELFSKWVGESERAVREVFRKARAAA 708

Query: 869  PSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            P IIFFDEID LA  RG   +G S V+DRV+SQLL E++G+ +  NVTV+AATNRPD ID
Sbjct: 709  PCIIFFDEIDALAVHRGGGDEGSSGVADRVVSQLLTEMNGIEELKNVTVVAATNRPDMID 768

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLI 987
             ALLRPGR DR+LYV PP+   RE IF+I L K P + D+ + +LA L+EG +GA+I+ +
Sbjct: 769  KALLRPGRIDRMLYVSPPDAPSRERIFQIFLNKTPHADDIALPKLAELTEGYSGAEIAGV 828

Query: 988  CREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVH 1037
            CREA + A+ E+  A  +   H   AI +  P           +F+R  H
Sbjct: 829  CREACMCAMREDPTAQVVKQTHFVAAIANTSPRITPEMVAFYDQFRRSCH 878



 Score =  232 bits (592), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 116/245 (47%), Positives = 160/245 (65%), Gaps = 15/245 (6%)

Query: 405 TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
           T E D   +GGL +E   +++++ ++ +     +  GL P KG+LL+GPPGTGKT +AR+
Sbjct: 332 TAELDYGSIGGLKREIDAVREVVELAVNSPKLFTEYGLAPPKGILLYGPPGTGKTLIARV 391

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG 523
            A  SG  ++ +NGPEV+S+ YGESE  +  +F  A+ +APA+VFIDE+DAIA  R D  
Sbjct: 392 VAQQSGCRVYVINGPEVISKYYGESEAKIRNLFKEAADNAPALVFIDEIDAIAGKRADAA 451

Query: 524 EELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSL 583
            E+  R+VATLL +M G+   D V+VI ATNRPD+++PALRRPGR DREIEI        
Sbjct: 452 SEMENRVVATLLTVMGGMEANDRVVVIGATNRPDALDPALRRPGRFDREIEI-------- 503

Query: 584 LKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
                  +P+   R EIL   L  M H+L  ++++  + ATHGFVGADLAALC EA+L+ 
Sbjct: 504 ------GIPTAEDRHEILKVTLRRMPHALSPADIQQFAAATHGFVGADLAALCREASLLS 557

Query: 644 LRRYS 648
           L R S
Sbjct: 558 LNRLS 562



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/273 (38%), Positives = 159/273 (58%), Gaps = 23/273 (8%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ +  +GG +     + E VE      + F   G  PP GIL++GPPG  KTL+AR VA
Sbjct: 334  ELDYGSIGGLKREIDAVREVVELAVNSPKLFTEYGLAPPKGILLYGPPGTGKTLIARVVA 393

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
             ++G     + GPE+ SK+ GESE  +R+LF +A  NAP+++F DEID   AI GK +D 
Sbjct: 394  QQSGCRVYVINGPEVISKYYGESEAKIRNLFKEAADNAPALVFIDEID---AIAGKRADA 450

Query: 891  VS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
             S + +RV++ LL  + G+     V VI ATNRPD +DPAL RPGRFDR + +G P   D
Sbjct: 451  ASEMENRVVATLLTVMGGMEANDRVVVIGATNRPDALDPALRRPGRFDREIEIGIPTAED 510

Query: 950  REEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEE---------- 998
            R EI ++ LR++P + S  +I++ A  + G  GAD++ +CREA++ ++            
Sbjct: 511  RHEILKVTLRRMPHALSPADIQQFAAATHGFVGADLAALCREASLLSLNRLSAQLFASAG 570

Query: 999  --------NLDASRITMQHLKTAIRHVQPSEIH 1023
                    +LD   IT + + +A++ V+PS + 
Sbjct: 571  APGEEELLSLDTLVITAEDMSSALKVVRPSTLR 603



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/266 (36%), Positives = 142/266 (53%), Gaps = 27/266 (10%)

Query: 385 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
           K +R  TL    ++   VQ       S +GG       LK+ +            +G+RP
Sbjct: 595 KVVRPSTLREVLVDVPKVQ------WSDIGGQDDTKQKLKEAVEWPLKHPEAFKRMGIRP 648

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
            +G+LL+GPPG  KT +A+  A +SG N   V GPE+ S+  GESE+A+ EVF  A  +A
Sbjct: 649 PRGILLYGPPGCSKTLMAKALATESGANFIAVKGPELFSKWVGESERAVREVFRKARAAA 708

Query: 504 PAVVFIDELDAIAPARKDGGEE----LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
           P ++F DE+DA+A   + GG+E    ++ R+V+ LL  M+G+     V V+AATNRPD I
Sbjct: 709 PCIIFFDEIDALA-VHRGGGDEGSSGVADRVVSQLLTEMNGIEELKNVTVVAATNRPDMI 767

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY 619
           + AL RPGR+DR           +L  SP   PS   R  I    L+   H+  D  +  
Sbjct: 768 DKALLRPGRIDR-----------MLYVSPPDAPS---RERIFQIFLNKTPHA-DDIALPK 812

Query: 620 LSMATHGFVGADLAALCNEAALVCLR 645
           L+  T G+ GA++A +C EA +  +R
Sbjct: 813 LAELTEGYSGAEIAGVCREACMCAMR 838


>gi|308800808|ref|XP_003075185.1| Nuclear AAA ATPase (VCP subfamily) (ISS) [Ostreococcus tauri]
 gi|116061739|emb|CAL52457.1| Nuclear AAA ATPase (VCP subfamily) (ISS) [Ostreococcus tauri]
          Length = 566

 Score =  342 bits (877), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 166/296 (56%), Positives = 223/296 (75%), Gaps = 5/296 (1%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            K+ + DFE AR+KVRPSA+REV +E+P V+W+DVGG  EVK +L EAVEW +KH EA KR
Sbjct: 270  KVTVDDFEDARVKVRPSALREVAIEIPNVRWDDVGGLEEVKNRLKEAVEWAEKHPEAMKR 329

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP GIL++GPPGCSKT++ARAVA+ +G NF+++KG ELFSKWVG+SEKAVRS+FA+
Sbjct: 330  VGATPPKGILLYGPPGCSKTMLARAVANASGRNFISIKGSELFSKWVGDSEKAVRSVFAR 389

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGV--SVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            AR++ P +IF DE+DGLA  RG    G   SV DRV++QLL E+DGL   VNVT++AATN
Sbjct: 390  ARSSQPCVIFIDEVDGLAGTRGGGEQGGAPSVQDRVITQLLGEMDGLAPTVNVTIVAATN 449

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNET-DREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            RPD +D ALLRPGRFDRLLYV PP+   DR  I ++  +  P + DV+++ +A  ++G T
Sbjct: 450  RPDLVDSALLRPGRFDRLLYVPPPSSIEDRLSILQVLFKNTPLAQDVDLKMIAASTQGYT 509

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS--EIHSYKELSAKFQR 1034
            GAD+S I REAA++A+EEN+D++ +  +HL T +  V+PS        ++  KFQR
Sbjct: 510  GADLSAIVREAALAALEENIDSTEVNAKHLGTGMMRVRPSPPARQELVDMYEKFQR 565



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/251 (47%), Positives = 162/251 (64%), Gaps = 22/251 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGG+    A L++++ +        +  G++P +GVLLHGPPG+GKT LAR  AH S   
Sbjct: 10  LGGVRDHEAALRELVALPLQSPEVFTRCGVKPPRGVLLHGPPGSGKTRLARAAAHASNAK 69

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE--LSQ 528
           LF VNGPE+VS N G+SE+AL  VF +A ++AP+VV +DELDAIAPAR +  G +  +S 
Sbjct: 70  LFVVNGPELVSANMGQSEEALRGVFLAAVKAAPSVVLLDELDAIAPARDQSNGTDGMMSS 129

Query: 529 RMVATLLNLMDGVCRT----DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
           R+VAT+L++ DG   T    D V+VIA TNRP+++E +LRRPGR DRE+E+         
Sbjct: 130 RIVATMLSIFDGASATFPELDRVVVIATTNRPEAVERSLRRPGRFDRELEV--------- 180

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 VP+P+ RLEIL   L G++H L +  VE L+   HGFVGAD+AALC  AA+  L
Sbjct: 181 -----GVPTPSDRLEILRTHLRGIDHELDEGYVEDLARRAHGFVGADIAALCQTAAMRAL 235

Query: 645 RRYSKIQTSSD 655
            R  +   SSD
Sbjct: 236 TRVIESPESSD 246



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/252 (38%), Positives = 145/252 (57%), Gaps = 8/252 (3%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            ++ +GG R+ +  L E V  P +  E F R G +PP G+L+ GPPG  KT +ARA A  +
Sbjct: 7    FDALGGVRDHEAALRELVALPLQSPEVFTRCGVKPPRGVLLHGPPGSGKTRLARAAAHAS 66

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE--SDGV 891
                  V GPEL S  +G+SE+A+R +F  A   APS++  DE+D +A  R +   +DG+
Sbjct: 67   NAKLFVVNGPELVSANMGQSEEALRGVFLAAVKAAPSVVLLDELDAIAPARDQSNGTDGM 126

Query: 892  SVSDRVMSQLLVELDG----LHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +S R+++ +L   DG      +   V VIA TNRP+ ++ +L RPGRFDR L VG P  
Sbjct: 127  -MSSRIVATMLSIFDGASATFPELDRVVVIATTNRPEAVERSLRRPGRFDRELEVGVPTP 185

Query: 948  TDREEIFRIHLRKIPCSSDVN-IRELACLSEGCTGADISLICREAAISAIEENLDASRIT 1006
            +DR EI R HLR I    D   + +LA  + G  GADI+ +C+ AA+ A+   +++   +
Sbjct: 186  SDRLEILRTHLRGIDHELDEGYVEDLARRAHGFVGADIAALCQTAAMRALTRVIESPESS 245

Query: 1007 MQHLKTAIRHVQ 1018
               + +  R +Q
Sbjct: 246  DADISSIARALQ 257



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 137/271 (50%), Gaps = 41/271 (15%)

Query: 387 LREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTK 445
           +R   L    IE  NV+         +GGL +    LK+ +  +      +  +G  P K
Sbjct: 283 VRPSALREVAIEIPNVR------WDDVGGLEEVKNRLKEAVEWAEKHPEAMKRVGATPPK 336

Query: 446 GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPA 505
           G+LL+GPPG  KT LAR  A+ SG N  ++ G E+ S+  G+SE+A+  VF  A  S P 
Sbjct: 337 GILLYGPPGCSKTMLARAVANASGRNFISIKGSELFSKWVGDSEKAVRSVFARARSSQPC 396

Query: 506 VVFIDELDAIA----PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           V+FIDE+D +A       + G   +  R++  LL  MDG+  T  V ++AATNRPD ++ 
Sbjct: 397 VIFIDEVDGLAGTRGGGEQGGAPSVQDRVITQLLGEMDGLAPTVNVTIVAATNRPDLVDS 456

Query: 562 ALRRPGRLDR--------EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           AL RPGR DR         IE  +S L  L KN+P A                       
Sbjct: 457 ALLRPGRFDRLLYVPPPSSIEDRLSILQVLFKNTPLA----------------------Q 494

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           D +++ ++ +T G+ GADL+A+  EAAL  L
Sbjct: 495 DVDLKMIAASTQGYTGADLSAIVREAALAAL 525


>gi|324506159|gb|ADY42638.1| Nuclear valosin-containing protein-like protein, partial [Ascaris
            suum]
          Length = 812

 Score =  342 bits (876), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 250/736 (33%), Positives = 374/736 (50%), Gaps = 137/736 (18%)

Query: 339  ANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVS-KSLREGTLPNAQI 397
            ANK    L  ++ + + T+S   +   F     TK  +    +A+  K+L      + Q 
Sbjct: 140  ANKTLIKLYEKKKETEETDSPMEKIAKFSKQRNTKRSIIQRGSAIGLKTLGSVAALDIQP 199

Query: 398  EFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGK 457
            E  NV        + LGG   ++  +  + +          LG++P +G LLHGPPG GK
Sbjct: 200  EKSNVT------FADLGGCEAQFLDVCRLSMHLKHPEIHERLGVQPPRGFLLHGPPGCGK 253

Query: 458  TSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAP 517
            T  A+  A +  + L  +   E+VS   GESE+ +  +F  A + AP VV +DE+DAIAP
Sbjct: 254  TLFAQAVAGELDLPLIKLASTELVSGVSGESEEKIRLLFAKAVEIAPCVVLLDEIDAIAP 313

Query: 518  ARKDGGEELSQRMVATLLNLMDGVCR------------------TDG------------- 546
             R+    E+ +R+V+ LL  +D + +                  +DG             
Sbjct: 314  KRESAQREMERRIVSQLLTCLDDLYKPKNAITHEESLADELIFASDGDIGVKKRKPNDGQ 373

Query: 547  ---VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHA 603
               VLVI  TNRPDSIE ALRR GR D+EI +               +P    R++IL  
Sbjct: 374  SRHVLVIGTTNRPDSIETALRRAGRFDKEIAL--------------GIPDERARIKILEV 419

Query: 604  LLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG 661
            +  G+    +D  V+   +A  T G+VGADL AL  EA+L  + R               
Sbjct: 420  VCRGIR---IDESVQIAQLARLTPGYVGADLKALAREASLCAVNR--------------- 461

Query: 662  TLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIAD 721
             +FE      T++Q    S+ +T                       ++  L+  ++ +  
Sbjct: 462  -VFE------TIVQPRTASKRLTAEE--------------------TNEELQKLLAWLKS 494

Query: 722  NFHNGVSDSS-GGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ 780
            N  + V D   G +F+          L DF+KA   V PSA RE    VP V WED+G  
Sbjct: 495  N--DAVDDVKLGNLFVI---------LEDFKKALTIVHPSAKREGFATVPDVSWEDIGAL 543

Query: 781  REVKTQLMEAVEWPQKHQEAFK--RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFL 838
            +E++ +L  ++ +P K  E F+   IG+  P GIL+ GPPGC KTL+A+A+A+E G+NF+
Sbjct: 544  KEIREELQWSILYPIKRPEDFELLAIGS-TPQGILLCGPPGCGKTLLAKAIANETGMNFI 602

Query: 839  AVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG-KESDGVSVSDRV 897
            +VKGPEL S +VGESE+AVR++F +AR ++P +IFFDEID L   R   E+ G +   R+
Sbjct: 603  SVKGPELLSMYVGESERAVRTVFQRARDSSPCVIFFDEIDALCPKRSLHETSGGA---RL 659

Query: 898  MSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFR-- 955
            ++QLL E+DG+  R  V +IAATNRPD +DPA+LRPGR D++L+V  P  TDR +I R  
Sbjct: 660  VNQLLTEMDGIECRKQVFLIAATNRPDIVDPAILRPGRLDKILFVDFPTVTDRVDILRKT 719

Query: 956  ----IHLRKIPCSSDVNIRELACLS--EGCTGADISLICREAAISAIEENLDASR----- 1004
                 H R    + DV+   +A     E  TGAD+  +  EA++ A++E L  +      
Sbjct: 720  TKDGTHPR---IAEDVSYEVIAADPSLEWFTGADLVALVHEASLVALKERLSTNDTSIDA 776

Query: 1005 ITMQHLKTAIRHVQPS 1020
            +TM+H + A++ V+PS
Sbjct: 777  LTMRHFRLAMQSVRPS 792


>gi|14601365|ref|NP_147901.1| cell division protein CDC48 [Aeropyrum pernix K1]
 gi|5105048|dbj|BAA80362.1| cell division control protein 48, AAA family [Aeropyrum pernix K1]
          Length = 726

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 151/297 (50%), Positives = 218/297 (73%), Gaps = 4/297 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   +RP+ +RE+ +EVP+V+W D+GG  E K  L EAVEWP KH E F+
Sbjct: 427  LKVTMKDFMEAMKMIRPTLIREIYVEVPEVRWSDIGGLEEAKQALREAVEWPLKHPEIFE 486

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G RPP G+L+FGPPG  KTL+A+AVA+E+G NF+AV+GPE+ SKWVGESE+A+R +F 
Sbjct: 487  KMGIRPPRGVLLFGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESERAIRKIFE 546

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP+++FFDEID +A  RG   D   V+DR+++Q+L E+DG+    NV VI ATNR
Sbjct: 547  RARQAAPAVVFFDEIDAIAPARGARFDTSGVTDRIVNQMLAEMDGIQPLSNVVVIGATNR 606

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP++  R+EIF+IH +K+P   DV++ +LA ++EG TGA
Sbjct: 607  PDILDPALLRPGRFDRLIYVPPPDKEARKEIFKIHTKKVPLGEDVDLEKLAEMTEGYTGA 666

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRL 1035
            DI  + REA ++ + E L+  ++ M+H   A++ V PS    +I  Y+ L+ + ++L
Sbjct: 667  DIEAVVREAVMAKLREKLEVGKVEMRHFLEALKKVPPSLTKEDILRYERLAKELKKL 723



 Score =  235 bits (600), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 127/294 (43%), Positives = 183/294 (62%), Gaps = 22/294 (7%)

Query: 751  EKARMKVRPSAMREVILE---VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            E   +++R   +RE I     VPKV WED+G   E K ++ E VE P KH E FK +G  
Sbjct: 157  EATEVEIREKPVREEIERLRGVPKVTWEDIGDLEEAKERIREIVELPMKHPEIFKHLGIE 216

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
            PP GIL++GPPG  KTL+A+A+A+E G  F+++ GPE+ SK+ GESE+ +R +F +A  N
Sbjct: 217  PPKGILLYGPPGTGKTLLAKALANEIGAYFISINGPEIMSKYYGESEQRLREIFKEAEEN 276

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            APSIIF DEID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD ID
Sbjct: 277  APSIIFIDEIDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLKERGRVIVIGATNRPDAID 334

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL- 986
            PAL RPGRFDR + + PP++  R EI ++H R +P + DV++ +LA ++ G TGAD++  
Sbjct: 335  PALRRPGRFDREIEIRPPDKRARAEILKVHTRNMPLAEDVDLDKLAEMTHGYTGADLAAL 394

Query: 987  -----------ICREAAISAIEENLDAS-----RITMQHLKTAIRHVQPSEIHS 1024
                         RE  I+   + + A+     ++TM+    A++ ++P+ I  
Sbjct: 395  AKEAAMAALRRFIREGKINFEAKEIPATVLKELKVTMKDFMEAMKMIRPTLIRE 448



 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 105/214 (49%), Positives = 141/214 (65%), Gaps = 15/214 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LA+  A++ G    ++NGPE++S+ YGESEQ L E+
Sbjct: 210 FKHLGIEPPKGILLYGPPGTGKTLLAKALANEIGAYFISINGPEIMSKYYGESEQRLREI 269

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A ++AP+++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 270 FKEAEENAPSIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLKERGRVIVIGATNR 329

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+I+PALRRPGR DREIEI            P   P    R EIL      M  +  D 
Sbjct: 330 PDAIDPALRRPGRFDREIEI-----------RP---PDKRARAEILKVHTRNMPLA-EDV 374

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +++ L+  THG+ GADLAAL  EAA+  LRR+ +
Sbjct: 375 DLDKLAEMTHGYTGADLAALAKEAAMAALRRFIR 408



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/241 (41%), Positives = 138/241 (57%), Gaps = 24/241 (9%)

Query: 411 SKLGGLSKEYAILKDIIISSSVK--STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           S +GGL +    L++ +    +K       +G+RP +GVLL GPPGTGKT LA+  A +S
Sbjct: 459 SDIGGLEEAKQALREAV-EWPLKHPEIFEKMGIRPPRGVLLFGPPGTGKTLLAKAVATES 517

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEEL 526
           G N   V GPE++S+  GESE+A+ ++F+ A Q+APAVVF DE+DAIAPAR  +     +
Sbjct: 518 GANFIAVRGPEILSKWVGESERAIRKIFERARQAAPAVVFFDEIDAIAPARGARFDTSGV 577

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           + R+V  +L  MDG+     V+VI ATNRPD ++PAL RPGR DR I             
Sbjct: 578 TDRIVNQMLAEMDGIQPLSNVVVIGATNRPDILDPALLRPGRFDRLI------------- 624

Query: 587 SPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VP P +  R EI       +     D ++E L+  T G+ GAD+ A+  EA +  L
Sbjct: 625 ---YVPPPDKEARKEIFKIHTKKVPLG-EDVDLEKLAEMTEGYTGADIEAVVREAVMAKL 680

Query: 645 R 645
           R
Sbjct: 681 R 681


>gi|150401347|ref|YP_001325113.1| ATPase AAA [Methanococcus aeolicus Nankai-3]
 gi|150014050|gb|ABR56501.1| AAA family ATPase, CDC48 subfamily [Methanococcus aeolicus Nankai-3]
          Length = 723

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 152/301 (50%), Positives = 225/301 (74%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + DF++A  +V PSA+REV++EVP V+WED+GG  E+K  L+EAVEWP K++E F+
Sbjct: 416  IKVTMKDFKEALKEVEPSALREVLVEVPNVRWEDIGGLDEIKQDLIEAVEWPIKNKEVFE 475

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G RPP G+L+FGPPG  KT++A+AVA+E+  NF++VKGPE+FSKWVGESEKA+R +F 
Sbjct: 476  KMGIRPPKGVLLFGPPGTGKTMLAKAVANESQANFISVKGPEIFSKWVGESEKAIREMFK 535

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IFFDEID +A  RG +  G  V+++V++QLL ELDGL +  +V V+AATNR
Sbjct: 536  KARQAAPTVIFFDEIDSIAPTRGSDMGGSGVAEKVVNQLLTELDGLEEPKDVVVVAATNR 595

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +D ALLRPGR DR++ V  PN   R +IF +H + +P + +V++++LA  +EG TGA
Sbjct: 596  PDMLDSALLRPGRLDRIVLVPVPNSDARYKIFEVHAKNMPIAEEVDLKKLAEETEGYTGA 655

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEA 1042
            DI  ICREAA++A+ EN++A ++ ++H K A++ ++PS       +  K  +    ++EA
Sbjct: 656  DIEAICREAAMTALRENINAEKVELKHFKKAMKKIRPSVKEGDMAVYEKLAKEYSGSSEA 715

Query: 1043 D 1043
            D
Sbjct: 716  D 716



 Score =  233 bits (595), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 126/303 (41%), Positives = 186/303 (61%), Gaps = 24/303 (7%)

Query: 737  SEKGCALKLELVDFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
            S KG     E  DF+   +K  P S ++E   ++P + ++D+GG +E   ++ E VE P 
Sbjct: 142  SPKGAVKITEFTDFD---IKTEPVSEIKES--KIPDIIYDDIGGLKEEVKKIREMVELPM 196

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            ++ E F ++G  PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+
Sbjct: 197  RYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEE 256

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
             +R +F  A   APSIIF DEID +A  R + S    V  R+++QLL  +DGL  R  V 
Sbjct: 257  NLRKIFEDAEEEAPSIIFIDEIDSVAPKRDEASG--EVERRMVAQLLTLMDGLGGRGQVV 314

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL 975
            VIAATNRPD +D AL RPGRFDR L +G P+   R+EI +IH R +P   +V++  LA +
Sbjct: 315  VIAATNRPDSLDGALRRPGRFDRELTIGVPDRKGRKEILQIHTRNMPL-ENVDLDYLADV 373

Query: 976  SEGCTGADISLICREAAISAIE---------------ENLDASRITMQHLKTAIRHVQPS 1020
            + G  GAD++ +C+EAA+  +                E L+  ++TM+  K A++ V+PS
Sbjct: 374  THGFVGADLASLCKEAAMKTLRRLLPDIDLEKEEIPAEILENIKVTMKDFKEALKEVEPS 433

Query: 1021 EIH 1023
             + 
Sbjct: 434  ALR 436



 Score =  216 bits (550), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 113/257 (43%), Positives = 162/257 (63%), Gaps = 20/257 (7%)

Query: 391 TLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLL 449
           T P ++I+   +   +  DI   GGL +E   +++++ +          LG+ P KGVLL
Sbjct: 159 TEPVSEIKESKIPDIIYDDI---GGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLL 215

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
            GPPGTGKT LA+  A+++G N +T+NGPE++S+  GE+E+ L ++F+ A + AP+++FI
Sbjct: 216 AGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEDAEEEAPSIIFI 275

Query: 510 DELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
           DE+D++AP R +   E+ +RMVA LL LMDG+     V+VIAATNRPDS++ ALRRPGR 
Sbjct: 276 DEIDSVAPKRDEASGEVERRMVAQLLTLMDGLGGRGQVVVIAATNRPDSLDGALRRPGRF 335

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 629
           DRE+ I               VP    R EIL      M   L + +++YL+  THGFVG
Sbjct: 336 DRELTI--------------GVPDRKGRKEILQIHTRNM--PLENVDLDYLADVTHGFVG 379

Query: 630 ADLAALCNEAALVCLRR 646
           ADLA+LC EAA+  LRR
Sbjct: 380 ADLASLCKEAAMKTLRR 396



 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 130/215 (60%), Gaps = 17/215 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K     +G+RP KGVLL GPPGTGKT LA+  A++S  N  +V GPE+ S+  GESE+A+
Sbjct: 471 KEVFEKMGIRPPKGVLLFGPPGTGKTMLAKAVANESQANFISVKGPEIFSKWVGESEKAI 530

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVI 550
            E+F  A Q+AP V+F DE+D+IAP R    GG  +++++V  LL  +DG+     V+V+
Sbjct: 531 REMFKKARQAAPTVIFFDEIDSIAPTRGSDMGGSGVAEKVVNQLLTELDGLEEPKDVVVV 590

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNRPD ++ AL RPGRLDR + +               VP+   R +I       M  
Sbjct: 591 AATNRPDMLDSALLRPGRLDRIVLV--------------PVPNSDARYKIFEVHAKNMPI 636

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           +  + +++ L+  T G+ GAD+ A+C EAA+  LR
Sbjct: 637 A-EEVDLKKLAEETEGYTGADIEAICREAAMTALR 670


>gi|156938218|ref|YP_001436014.1| ATPase AAA [Ignicoccus hospitalis KIN4/I]
 gi|156567202|gb|ABU82607.1| AAA family ATPase, CDC48 subfamily [Ignicoccus hospitalis KIN4/I]
          Length = 729

 Score =  341 bits (874), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 161/296 (54%), Positives = 219/296 (73%), Gaps = 6/296 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF  A   V+P+ MREV +EVP+V WED+GG  +VK QL EAV WP KH E F 
Sbjct: 433  LKVTFRDFLAAMKVVQPTLMREVYIEVPEVHWEDIGGLEDVKQQLKEAVVWPLKHPEFFT 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KTL+A+A A+E+  NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 493  EMGIEPPKGILLFGPPGTGKTLLAKAAATESQANFIAVRGPEILSKWVGESEKAIREIFR 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+I+FFDEID +AA RGK+  G  V DR+++QLL E+DG+     VTVIAATNR
Sbjct: 553  KARQAAPTIVFFDEIDSIAARRGKDVSG--VIDRIVNQLLTEMDGIEPLQRVTVIAATNR 610

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP++  R EIF++H R++P + DV++ +LA +++G TGA
Sbjct: 611  PDLLDPALLRPGRFDRLIYVPPPDKKARLEIFKVHTRRMPLADDVDLEKLADMTQGYTGA 670

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            DI+ +CREAA+ A+ EN+    +TM+H + A++ V+PS    +I  Y+ L+ + +R
Sbjct: 671  DIAALCREAALIALRENMKPVPVTMKHFERAMKAVRPSLKREDILRYERLAEEVKR 726



 Score =  249 bits (635), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 123/275 (44%), Positives = 179/275 (65%), Gaps = 20/275 (7%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E +  VPKV WED+G   E K +L E VE P KH E F+ +G  PP G+L++GPPG  KT
Sbjct: 178  EAVRGVPKVTWEDIGDLEEAKERLREIVELPMKHPEIFRHLGIEPPKGVLLYGPPGTGKT 237

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            ++A+A+A+E G  F+A+ GPE+ SK+ GESE+ +R +F +AR NAPSIIF DEID +A  
Sbjct: 238  MLAKALANEIGAYFIAINGPEIMSKYYGESEQRLREIFEEARKNAPSIIFIDEIDAIAPK 297

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD IDPAL RPGRFDR + + 
Sbjct: 298  R-EEVTG-EVEKRVVAQLLTLMDGLQERGRVVVIGATNRPDAIDPALRRPGRFDREIEIP 355

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EE 998
            PP++  R+ I  +H R +P + DV++  +A ++ G TGAD++ + +EAA++A+     E+
Sbjct: 356  PPDKRARKAILEVHTRNVPLAEDVDLDRIAEMTHGYTGADLAALVKEAAMNALRRFFKEK 415

Query: 999  NLDAS-------------RITMQHLKTAIRHVQPS 1020
             +D +             ++T +    A++ VQP+
Sbjct: 416  GIDLTKVEKVPASELEKLKVTFRDFLAAMKVVQPT 450



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/241 (44%), Positives = 152/241 (63%), Gaps = 22/241 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +G L +    L++I+ +          LG+ P KGVLL+GPPGTGKT LA+  A++ G  
Sbjct: 191 IGDLEEAKERLREIVELPMKHPEIFRHLGIEPPKGVLLYGPPGTGKTMLAKALANEIGAY 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +NGPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+DAIAP R++   E+ +R+V
Sbjct: 251 FIAINGPEIMSKYYGESEQRLREIFEEARKNAPSIIFIDEIDAIAPKREEVTGEVEKRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNRPD+I+PALRRPGR DREIEI                
Sbjct: 311 AQLLTLMDGLQERGRVVVIGATNRPDAIDPALRRPGRFDREIEI---------------- 354

Query: 592 PSPAQRLEILHALLSGMEHSLL---DSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
           P P +R     A+L     ++    D +++ ++  THG+ GADLAAL  EAA+  LRR+ 
Sbjct: 355 PPPDKRAR--KAILEVHTRNVPLAEDVDLDRIAEMTHGYTGADLAALVKEAAMNALRRFF 412

Query: 649 K 649
           K
Sbjct: 413 K 413



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/240 (42%), Positives = 135/240 (56%), Gaps = 20/240 (8%)

Query: 413 LGGLSKEYAILKDIIISS-SVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      LK+ ++         + +G+ P KG+LL GPPGTGKT LA+  A +S  N
Sbjct: 467 IGGLEDVKQQLKEAVVWPLKHPEFFTEMGIEPPKGILLFGPPGTGKTLLAKAAATESQAN 526

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              V GPE++S+  GESE+A+ E+F  A Q+AP +VF DE+D+IA  R      +  R+V
Sbjct: 527 FIAVRGPEILSKWVGESEKAIREIFRKARQAAPTIVFFDEIDSIAARRGKDVSGVIDRIV 586

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
             LL  MDG+     V VIAATNRPD ++PAL RPGR DR I                 V
Sbjct: 587 NQLLTEMDGIEPLQRVTVIAATNRPDLLDPALLRPGRFDRLI----------------YV 630

Query: 592 PSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           P P +  RLEI       M  +  D ++E L+  T G+ GAD+AALC EAAL+ LR   K
Sbjct: 631 PPPDKKARLEIFKVHTRRMPLA-DDVDLEKLADMTQGYTGADIAALCREAALIALRENMK 689


>gi|320100449|ref|YP_004176041.1| AAA ATPase [Desulfurococcus mucosus DSM 2162]
 gi|319752801|gb|ADV64559.1| AAA family ATPase, CDC48 subfamily [Desulfurococcus mucosus DSM 2162]
          Length = 746

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 162/327 (49%), Positives = 227/327 (69%), Gaps = 12/327 (3%)

Query: 724  HNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREV 783
              G+    G    +EK   LK+ + DF  A   V+PS +REV +EVP V+W+D+GG  +V
Sbjct: 413  EEGIEIEKGQPIPAEKLEKLKVTMEDFLVAMKSVQPSLIREVFVEVPNVRWDDIGGLDDV 472

Query: 784  KTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGP 843
            K +L EA+EWP K+   F+++G  PP GIL+FGPPG  KTL+A+AVA+E+G NF+A++GP
Sbjct: 473  KQELREAIEWPMKYPGVFEKMGIEPPKGILLFGPPGTGKTLLAKAVATESGANFIAIRGP 532

Query: 844  ELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLV 903
            E+ SKWVGESEKA+R +F +AR  AP+++FFDEID +A +RG  SD   V+DR+++Q+L 
Sbjct: 533  EVLSKWVGESEKAIRQIFRRARMVAPAVVFFDEIDSIAGVRG--SDPSGVTDRIVNQMLT 590

Query: 904  ELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC 963
            ELDG+     V VIAATNRPD +DPALLRPGRFDRL+YV PP+   R +IF++H RK+P 
Sbjct: 591  ELDGIQPLRKVVVIAATNRPDLLDPALLRPGRFDRLIYVPPPDYNARLQIFKVHTRKMPL 650

Query: 964  SSDVNIRELACLSEGCTGADISLICREAAISAIEEN------LDASRITMQHLKTAIRHV 1017
              DVN+ ELA  +EG TGADI+ +CREA++ A+ EN      LD ++I M H   A+  +
Sbjct: 651  GEDVNLEELARKTEGYTGADIAAVCREASMIALRENYAATGRLDVTKIGMSHFMKALEKI 710

Query: 1018 QP----SEIHSYKELSAKFQRLVHSNA 1040
             P    S+I  Y+ L+ + +R+  S +
Sbjct: 711  PPSLSRSDIEMYERLARELKRVSGSGS 737



 Score =  249 bits (635), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 127/285 (44%), Positives = 184/285 (64%), Gaps = 23/285 (8%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VRP A+ E    V +V WED+G   E K ++ E VE P K+ E F+ +G  PP GIL++G
Sbjct: 173  VRPEALGE---GVSRVTWEDIGDLEEAKQKIREIVELPMKYPELFEHLGIEPPKGILLYG 229

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+A+A+A+E G  F+ + GPE+ SK+ GESE+ +R +F +A+ANAP++IF DE
Sbjct: 230  PPGTGKTLLAKALANEIGAYFITINGPEIMSKFYGESEERLRKIFEEAQANAPAVIFIDE 289

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD IDPAL RPGRF
Sbjct: 290  IDSIAPKR-EEVTG-EVEKRVVAQLLTLMDGLKERGKVIVIGATNRPDAIDPALRRPGRF 347

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + + PP++  R+EI  +H R +P + DV++ ++A ++ G TGADI+ + +EAA++A+
Sbjct: 348  DREIEIPPPDKRARKEILAVHTRNMPLTEDVDLDKIADMTHGYTGADIAALAKEAAMNAL 407

Query: 997  E------------------ENLDASRITMQHLKTAIRHVQPSEIH 1023
                               E L+  ++TM+    A++ VQPS I 
Sbjct: 408  RRFMKEEGIEIEKGQPIPAEKLEKLKVTMEDFLVAMKSVQPSLIR 452



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/240 (44%), Positives = 152/240 (63%), Gaps = 20/240 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +G L +    +++I+ +          LG+ P KG+LL+GPPGTGKT LA+  A++ G  
Sbjct: 190 IGDLEEAKQKIREIVELPMKYPELFEHLGIEPPKGILLYGPPGTGKTLLAKALANEIGAY 249

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T+NGPE++S+ YGESE+ L ++F+ A  +APAV+FIDE+D+IAP R++   E+ +R+V
Sbjct: 250 FITINGPEIMSKFYGESEERLRKIFEEAQANAPAVIFIDEIDSIAPKREEVTGEVEKRVV 309

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNRPD+I+PALRRPGR DREIEI                
Sbjct: 310 AQLLTLMDGLKERGKVIVIGATNRPDAIDPALRRPGRFDREIEI---------------- 353

Query: 592 PSPAQRL--EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           P P +R   EIL      M  +  D +++ ++  THG+ GAD+AAL  EAA+  LRR+ K
Sbjct: 354 PPPDKRARKEILAVHTRNMPLT-EDVDLDKIADMTHGYTGADIAALAKEAAMNALRRFMK 412



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/214 (42%), Positives = 123/214 (57%), Gaps = 19/214 (8%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                +G+ P KG+LL GPPGTGKT LA+  A +SG N   + GPEV+S+  GESE+A+ 
Sbjct: 488 GVFEKMGIEPPKGILLFGPPGTGKTLLAKAVATESGANFIAIRGPEVLSKWVGESEKAIR 547

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           ++F  A   APAVVF DE+D+IA  R      ++ R+V  +L  +DG+     V+VIAAT
Sbjct: 548 QIFRRARMVAPAVVFFDEIDSIAGVRGSDPSGVTDRIVNQMLTELDGIQPLRKVVVIAAT 607

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHS 611
           NRPD ++PAL RPGR DR I                 VP P    RL+I       M   
Sbjct: 608 NRPDLLDPALLRPGRFDRLI----------------YVPPPDYNARLQIFKVHTRKMPLG 651

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D  +E L+  T G+ GAD+AA+C EA+++ LR
Sbjct: 652 -EDVNLEELARKTEGYTGADIAAVCREASMIALR 684


>gi|307188304|gb|EFN73096.1| Spermatogenesis-associated protein 5 [Camponotus floridanus]
          Length = 803

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 159/298 (53%), Positives = 216/298 (72%), Gaps = 7/298 (2%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            K+ ++DF  A +  +PSAM+EV++EV  V+W D+GG  ++K +L +AVEWP +H EAF R
Sbjct: 502  KVTMIDFHHALITTKPSAMKEVLVEVSNVRWSDIGGLEDLKLKLKQAVEWPLRHPEAFAR 561

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP G+LMFGPPGCSKT++A+A+A+E+ +NFL +KGPELFSKWVGESEKAVR +F K
Sbjct: 562  MGITPPRGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREIFRK 621

Query: 864  ARANAPSIIFFDEIDGLAAIRG-KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            AR  APSIIF DEID L   RG    +G +V +RV++QLL+ELDG+    +VT++AATNR
Sbjct: 622  ARQVAPSIIFIDEIDALGGERGFSNGNGSNVQERVLAQLLIELDGVTTLGSVTLVAATNR 681

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD------VNIRELACLS 976
            PDKID ALLRPGR DR++YVG P+E  R EIF I L+ +P + +      VNI +L  L+
Sbjct: 682  PDKIDKALLRPGRLDRIIYVGLPDEETRREIFNIKLQNMPIAKEENIEDKVNIDDLVSLT 741

Query: 977  EGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            EG TGA+I  IC EAA+ A+EENL+A+ I  +H K A + V P   +S  ++   + +
Sbjct: 742  EGYTGAEIQAICHEAAMKALEENLNATVIVKKHFKAAFKIVTPRTSNSLLQIYEDYNK 799



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 124/217 (57%), Gaps = 22/217 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +G+ P +GVL+ GPPG  KT +A+  A +S VN   + GPE+ S+  GESE+A+ E+
Sbjct: 559 FARMGITPPRGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREI 618

Query: 496 FDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q AP+++FIDE+DA+   R      G  + +R++A LL  +DGV     V ++AA
Sbjct: 619 FRKARQVAPSIIFIDEIDALGGERGFSNGNGSNVQERVLAQLLIELDGVTTLGSVTLVAA 678

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM---- 608
           TNRPD I+ AL RPGRLDR I +               +P    R EI +  L  M    
Sbjct: 679 TNRPDKIDKALLRPGRLDRIIYV--------------GLPDEETRREIFNIKLQNMPIAK 724

Query: 609 EHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCL 644
           E ++ D   ++ L   T G+ GA++ A+C+EAA+  L
Sbjct: 725 EENIEDKVNIDDLVSLTEGYTGAEIQAICHEAAMKAL 761



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 141/242 (58%), Gaps = 19/242 (7%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           I  +GG S   + ++D++ I      ++   G+  +KG+LL+GP G GK+ +A     + 
Sbjct: 268 IEDIGGYSDLISDIRDVVTIGIGKYRSIEHFGV--SKGILLYGPIGVGKSMIANAIISEC 325

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            VN FTV   ++ S++ GE+E  L E+F+ A  + P+++ ++++D + P R +   +  +
Sbjct: 326 NVNAFTVYSSDIYSKSIGETENKLKEIFNKAMSNIPSIILLEDIDNLCPKRSNSSTDHER 385

Query: 529 RMVATLLNLMDGVCRTDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           R++A L+ L D +  T+  ++++A T++ D I+ +LRRPGRLD E EI            
Sbjct: 386 RVLAQLITLFDDLQSTNSDIVIMATTSKLDFIDSSLRRPGRLDMEFEI------------ 433

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
              VP+P  R EIL  LLS + ++L   +++ +S  THGFVGADL  LC++A +  + +Y
Sbjct: 434 --YVPTPNMRTEILIKLLSKIPNTLSHEDIQNISFVTHGFVGADLYGLCSKAIINAV-KY 490

Query: 648 SK 649
            K
Sbjct: 491 QK 492



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 134/258 (51%), Gaps = 12/258 (4%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            K + ED+GG  ++ + + + V        + +  G     GIL++GP G  K+++A A+ 
Sbjct: 265  KFRIEDIGGYSDLISDIRDVVTIGIGKYRSIEHFGV--SKGILLYGPIGVGKSMIANAII 322

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE  +N   V   +++SK +GE+E  ++ +F KA +N PSII  ++ID L   R   S  
Sbjct: 323  SECNVNAFTVYSSDIYSKSIGETENKLKEIFNKAMSNIPSIILLEDIDNLCPKRSNSS-- 380

Query: 891  VSVSDRVMSQLLVELDGLHQ-RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
                 RV++QL+   D L     ++ ++A T++ D ID +L RPGR D    +  P    
Sbjct: 381  TDHERRVLAQLITLFDDLQSTNSDIVIMATTSKLDFIDSSLRRPGRLDMEFEIYVPTPNM 440

Query: 950  REEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDA------ 1002
            R EI    L KIP + S  +I+ ++ ++ G  GAD+  +C +A I+A++   D       
Sbjct: 441  RTEILIKLLSKIPNTLSHEDIQNISFVTHGFVGADLYGLCSKAIINAVKYQKDKIMLDDE 500

Query: 1003 SRITMQHLKTAIRHVQPS 1020
             ++TM     A+   +PS
Sbjct: 501  PKVTMIDFHHALITTKPS 518


>gi|357627343|gb|EHJ77073.1| hypothetical protein KGM_22016 [Danaus plexippus]
          Length = 809

 Score =  339 bits (869), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 229/683 (33%), Positives = 355/683 (51%), Gaps = 103/683 (15%)

Query: 390  GTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLL 449
            GT+ N ++ F+++           GG+S     + D+++        + LG++  +G LL
Sbjct: 166  GTVKNVKVSFEDI-----------GGISDIITQICDLVLHMKHPEVYAKLGIKCPRGALL 214

Query: 450  HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
            HGPPGTGKT LA   A    + L  V G E+V    GESE+ + E+F+ A+  AP ++FI
Sbjct: 215  HGPPGTGKTLLAHAIAGKLQLPLIAVTGTELVGGVSGESEERIRELFERATTVAPCILFI 274

Query: 510  DELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG-VLVIAATNRPDSIEPALRRPGR 568
            DE+DA+   R +  +E+ +RMVA LL  +D +      VL++AATN PDS++PALRR GR
Sbjct: 275  DEIDAVCGNRMNAQKEMEKRMVAQLLASLDSLNENSASVLILAATNNPDSLDPALRRAGR 334

Query: 569  LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 628
            L++EI +               +PS   R EIL  L   +     D  +  L+  T GFV
Sbjct: 335  LEQEITL--------------GIPSLKARKEILLILCKNLALG-DDVNMNNLAQITPGFV 379

Query: 629  GADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS 687
            GADL AL N+A+   ++R ++KI  S + + +   + E + + D +    + +  I + S
Sbjct: 380  GADLQALVNKASTYAVKRIFAKI--SQNRIENVKEVMENKDNEDKIPNGENSNEEIVKES 437

Query: 688  RDCL--DSASPCTSDLPTSLLSSSLPLRGT----------------------VSEIADNF 723
               +  +   P   D  T  ++S     G+                      V  + +N 
Sbjct: 438  DVVVTDNVLEPSIQDSTTEAVNSQETDHGSGIIESVQKAPEIEIKPIDPVDEVLSLLENT 497

Query: 724  HNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREV 783
            H   S+   G+ + ++         DF KA    +P A+RE I+ VP V W+DVG   +V
Sbjct: 498  HPYTSEQLSGLAIIQE---------DFLKALKTTKPCAVREGIVTVPDVTWDDVGSLNQV 548

Query: 784  KTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGP 843
            +  L  AV  P K+ E  K++G   PTG+                       NF++VKGP
Sbjct: 549  RKDLQLAVLAPVKYPEQLKKLGLSSPTGV-----------------------NFISVKGP 585

Query: 844  ELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLV 903
            EL + +VGESE+AVR+ F +AR +AP +IFFDE D L   R    +  +   RV++QLL 
Sbjct: 586  ELLNMYVGESERAVRTCFRRARNSAPCVIFFDEFDALCPRRSSHDNNGAA--RVVNQLLT 643

Query: 904  ELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---K 960
            E+DG+  R  V V+AA+NRPD IDPA+LRPGR DR++YVG P   DR +I +   +   K
Sbjct: 644  EMDGIESREGVFVLAASNRPDIIDPAVLRPGRLDRIMYVGMPATEDRYDILQKLTKGGTK 703

Query: 961  IPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN-----LDAS-RITMQHLKTAI 1014
               S DV++R +A ++EG TGAD+S + R AA  ++  +     LD    ++ +  ++A+
Sbjct: 704  PSLSPDVDLRVIADVTEGYTGADLSGLVRAAATYSLTNHIANGTLDGEIFVSFEDFRSAL 763

Query: 1015 RHVQPS-----EIHSYKELSAKF 1032
               +PS     ++H Y++L  K+
Sbjct: 764  SKCKPSISQKEQLH-YEKLRIKY 785


>gi|156378275|ref|XP_001631069.1| predicted protein [Nematostella vectensis]
 gi|156218102|gb|EDO39006.1| predicted protein [Nematostella vectensis]
          Length = 573

 Score =  339 bits (869), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 168/317 (52%), Positives = 218/317 (68%), Gaps = 10/317 (3%)

Query: 722  NFHNGVSDSSGGMFMSEKGCALKLELV----DFEKARMKVRPSAMREVILEVPKVKWEDV 777
            N  NG S S     + ++   +K EL+    D   A   VRPSAMREV LEVPKV W DV
Sbjct: 256  NHDNGSSQS-----LEQRDARIKRELLVSSEDMRAAFRCVRPSAMREVALEVPKVHWSDV 310

Query: 778  GGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNF 837
            GG   +K +L EAVEWP KH EAF+R+G RPP GILM+GPPGCSKTL+ARA+A+E+GLNF
Sbjct: 311  GGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIARALATESGLNF 370

Query: 838  LAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRV 897
            +A+KGPELFSKWVGESEKAVR +F KARA APSI+FFDE+D +A  R   + G  V+DRV
Sbjct: 371  IAIKGPELFSKWVGESEKAVREVFLKARATAPSIVFFDELDAIAGQRNS-TGGSDVNDRV 429

Query: 898  MSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIH 957
            ++QLL ELDG+    +V  IAATNRPD ID AL+RPGR DRL+YV  P    R  I  IH
Sbjct: 430  LTQLLTELDGVETLKDVIFIAATNRPDMIDKALMRPGRVDRLIYVPLPCWDTRRHILEIH 489

Query: 958  LRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 1017
            L + PC   +++ +L   +EG +GA+I+ +CREAA++A++EN+ A  + ++H + A+  V
Sbjct: 490  LARTPCEGSLDLEDLVERTEGYSGAEIAAVCREAALAALQENIQAESVELRHFEKALMAV 549

Query: 1018 QPSEIHSYKELSAKFQR 1034
            +P            FQ+
Sbjct: 550  KPRTSTQMINFYDDFQK 566



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 109/238 (45%), Positives = 155/238 (65%), Gaps = 18/238 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +  +     ++ G+ P +G+LL+GP GTGKT +AR  A+++GV+
Sbjct: 29  IGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGPSGTGKTMIARAVANETGVH 88

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPEV+S+ YGE+E  L E+F  A   +P++VFIDELDA+ P R     E  +R+V
Sbjct: 89  FFCINGPEVLSRYYGETEARLREIFTEAQNKSPSIVFIDELDALCPRRDKVQNEFERRVV 148

Query: 532 ATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           ATLL LMDG+    TD  V+V+AATNRPD+++PALRRPGR DREIEI             
Sbjct: 149 ATLLTLMDGMHMKSTDTYVMVLAATNRPDALDPALRRPGRFDREIEI------------- 195

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             +PS   R +IL  LL  + HSL D ++  L+ + HG+VGADLAA C EA+L   +R
Sbjct: 196 -GIPSVTDRRDILVTLLKNVPHSLHDEDISSLAESAHGYVGADLAAACKEASLYAFKR 252



 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 145/233 (62%), Gaps = 6/233 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++ +GG +     + E +E P  + E F   G  PP GIL++GP G  KT++ARAVA+
Sbjct: 24   VSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGPSGTGKTMIARAVAN 83

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G++F  + GPE+ S++ GE+E  +R +F +A+  +PSI+F DE+D L   R K  +  
Sbjct: 84   ETGVHFFCINGPEVLSRYYGETEARLREIFTEAQNKSPSIVFIDELDALCPRRDKVQN-- 141

Query: 892  SVSDRVMSQLLVELDGLHQR---VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                RV++ LL  +DG+H +     V V+AATNRPD +DPAL RPGRFDR + +G P+ T
Sbjct: 142  EFERRVVATLLTLMDGMHMKSTDTYVMVLAATNRPDALDPALRRPGRFDREIEIGIPSVT 201

Query: 949  DREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            DR +I    L+ +P S  D +I  LA  + G  GAD++  C+EA++ A + +L
Sbjct: 202  DRRDILVTLLKNVPHSLHDEDISSLAESAHGYVGADLAAACKEASLYAFKRSL 254



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 127/213 (59%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+RP +G+L++GPPG  KT +AR  A +SG+N   + GPE+ S+  GESE+A+ EV
Sbjct: 334 FQRLGIRPPRGILMYGPPGCSKTLIARALATESGLNFIAIKGPELFSKWVGESEKAVREV 393

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD-GGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +AP++VF DELDAIA  R   GG +++ R++  LL  +DGV     V+ IAATN
Sbjct: 394 FLKARATAPSIVFFDELDAIAGQRNSTGGSDVNDRVLTQLLTELDGVETLKDVIFIAATN 453

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEIL--HALLSGMEHSL 612
           RPD I+ AL RPGR+DR I + +              P    R  IL  H   +  E SL
Sbjct: 454 RPDMIDKALMRPGRVDRLIYVPL--------------PCWDTRRHILEIHLARTPCEGSL 499

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              ++E L   T G+ GA++AA+C EAAL  L+
Sbjct: 500 ---DLEDLVERTEGYSGAEIAAVCREAALAALQ 529


>gi|118431889|ref|NP_148637.2| cell division protein CDC48 [Aeropyrum pernix K1]
 gi|116063212|dbj|BAA81490.2| cell division control protein 48, AAA family [Aeropyrum pernix K1]
          Length = 737

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 150/293 (51%), Positives = 219/293 (74%), Gaps = 1/293 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF KA  ++ PS +RE+ +EVP+V+W D+GG  +VK +L E VEWP KH EAF R+G RP
Sbjct: 435  DFLKALREITPSGLREIQIEVPEVRWSDIGGLEDVKQELREVVEWPLKHPEAFTRMGIRP 494

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+FGPPG  KTL+A+AVA+E+G NF+AV+GPE+ SKWVGESE+A+R +FAKAR +A
Sbjct: 495  PRGVLLFGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESERAIREIFAKARQHA 554

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A +RG +  G  V++R++SQLL E+DG+    +V VIAATNRPD +DP
Sbjct: 555  PAVVFFDEIDAIAPVRGTDV-GTRVTERIVSQLLTEIDGVSDLHDVVVIAATNRPDMVDP 613

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+RPGR ++++YV PP+ + R EI RIH RK+P + DV++ E+A  +EG TGADI  + 
Sbjct: 614  ALMRPGRLEKMIYVPPPDFSSRLEILRIHTRKVPLAEDVDLAEIARRTEGYTGADIEALV 673

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAE 1041
            REA+++A+ E+++A+ ++M+H + A++ V+PS      E   ++   V    E
Sbjct: 674  REASLAALREDINAAEVSMRHFEVALKKVKPSVTPQMVEYYKRWLETVKQRQE 726



 Score =  242 bits (617), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 136/306 (44%), Positives = 193/306 (63%), Gaps = 30/306 (9%)

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEV----------PKVKWEDVGGQREVKTQLME 789
            G A++L++VD   AR K       E I++V          PKV +ED+GG +EV  ++ E
Sbjct: 146  GQAVQLQVVD---ARPKGAVIVSEETIVDVLEKPVAQSRVPKVTYEDIGGLKEVIEKVRE 202

Query: 790  AVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKW 849
             VE P +H E FKR+G  PP GIL++GPPG  KTL+A+AVA+EA   F+++ GPE+ SK+
Sbjct: 203  MVELPLRHPEIFKRLGIEPPKGILLYGPPGTGKTLLAKAVANEADAYFISINGPEIMSKY 262

Query: 850  VGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLH 909
             GESE+ +R +F +A+ NAPSIIF DEID +A  R  +     V  RV++QLL  +DGL 
Sbjct: 263  YGESEQRLREIFEEAKKNAPSIIFIDEIDAIAPKR--DEVVGEVERRVVAQLLALMDGLE 320

Query: 910  QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNI 969
             R NV VIAATNRP+ IDPAL RPGRFDR + V  P++  R EI +IH R +P + D+++
Sbjct: 321  ARGNVIVIAATNRPNAIDPALRRPGRFDREIEVPLPDKHGRLEILQIHTRHMPLAEDMDL 380

Query: 970  RELACLSEGCTGADISLICREAAISAIE---------------ENLDASRITMQHLKTAI 1014
             +LA +++G TGAD++ + REAA+ A+                E L+   +TM+    A+
Sbjct: 381  EKLAEMTKGFTGADLAALAREAAMYALRRYLPEIDLDQESIPVEVLEKMVVTMEDFLKAL 440

Query: 1015 RHVQPS 1020
            R + PS
Sbjct: 441  REITPS 446



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/236 (45%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    +++++ +          LG+ P KG+LL+GPPGTGKT LA+  A+++   
Sbjct: 190 IGGLKEVIEKVREMVELPLRHPEIFKRLGIEPPKGILLYGPPGTGKTLLAKAVANEADAY 249

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             ++NGPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+DAIAP R +   E+ +R+V
Sbjct: 250 FISINGPEIMSKYYGESEQRLREIFEEAKKNAPSIIFIDEIDAIAPKRDEVVGEVERRVV 309

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATNRP++I+PALRRPGR DREIE+ +              
Sbjct: 310 AQLLALMDGLEARGNVIVIAATNRPNAIDPALRRPGRFDREIEVPL-------------- 355

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    RLEIL      M  +  D ++E L+  T GF GADLAAL  EAA+  LRRY
Sbjct: 356 PDKHGRLEILQIHTRHMPLA-EDMDLEKLAEMTKGFTGADLAALAREAAMYALRRY 410



 Score =  180 bits (457), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/269 (42%), Positives = 156/269 (57%), Gaps = 32/269 (11%)

Query: 385 KSLREGT---LPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVK--STLSSL 439
           K+LRE T   L   QIE   V+       S +GGL      L++++    +K     + +
Sbjct: 438 KALREITPSGLREIQIEVPEVRW------SDIGGLEDVKQELREVV-EWPLKHPEAFTRM 490

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+RP +GVLL GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ E+F  A
Sbjct: 491 GIRPPRGVLLFGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESERAIREIFAKA 550

Query: 500 SQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
            Q APAVVF DE+DAIAP R  D G  +++R+V+ LL  +DGV     V+VIAATNRPD 
Sbjct: 551 RQHAPAVVFFDEIDAIAPVRGTDVGTRVTERIVSQLLTEIDGVSDLHDVVVIAATNRPDM 610

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGMEHSLLDSE 616
           ++PAL RPGRL++ I                 VP P  + RLEIL      +  +  D +
Sbjct: 611 VDPALMRPGRLEKMI----------------YVPPPDFSSRLEILRIHTRKVPLA-EDVD 653

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           +  ++  T G+ GAD+ AL  EA+L  LR
Sbjct: 654 LAEIARRTEGYTGADIEALVREASLAALR 682


>gi|347522941|ref|YP_004780511.1| AAA family ATPase, CDC48 subfamily [Pyrolobus fumarii 1A]
 gi|343459823|gb|AEM38259.1| AAA family ATPase, CDC48 subfamily [Pyrolobus fumarii 1A]
          Length = 743

 Score =  338 bits (867), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 162/304 (53%), Positives = 218/304 (71%), Gaps = 10/304 (3%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L + + DF  A   ++PS +RE+ +EVP+V W+D+GG  +VK QL EAVEWP KH E F+
Sbjct: 439  LVVTMKDFLDAMKVIQPSLIREIYVEVPEVHWDDIGGLEDVKQQLREAVEWPLKHPEVFE 498

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G RPP GIL+FGPPG  KTL+A+A A+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 499  SMGIRPPKGILLFGPPGVGKTLLAKAAATESGANFIAVRGPEILSKWVGESEKAIREIFR 558

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP+IIFFDEID +A  RG   D   V+DR+++QLL E+DG+    NV VIAATNR
Sbjct: 559  RARQVAPTIIFFDEIDAIAPARGMRHDTSGVTDRIVNQLLTEMDGIVPLQNVVVIAATNR 618

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP++  R EIFRIH RK+P + DV++ +LA ++EG TGA
Sbjct: 619  PDILDPALLRPGRFDRLIYVPPPDKKARLEIFRIHTRKMPLADDVDLEKLAEMTEGYTGA 678

Query: 983  DISLICREAAISAIEE------NLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            DI  +CREAA+ A+ E       L    + M+H   A++ V PS    +I  Y+ L+ + 
Sbjct: 679  DIEAVCREAAMIALREAIQKGQGLKPQPVRMEHFLKALKAVPPSLTREDILRYERLAREL 738

Query: 1033 QRLV 1036
            +R+V
Sbjct: 739  KRMV 742



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/299 (41%), Positives = 180/299 (60%), Gaps = 31/299 (10%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            ++  P    +V  ++P+V WED+G   E K ++ E VE P KH E FK +G  PP GIL+
Sbjct: 164  LREEPVKEEQVRRKIPRVTWEDIGDLEEAKERIREIVELPLKHPELFKHLGIEPPKGILL 223

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+A+A+A+E G  F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF 
Sbjct: 224  YGPPGVGKTLLAKALANEIGAYFIAINGPEIMSKYYGESEQRLREIFEEAEKNAPAIIFI 283

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD IDPAL RPG
Sbjct: 284  DEIDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLKERGKVIVIGATNRPDAIDPALRRPG 341

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC-------------LSEGCTG 981
            RFDR + + PP++  R+EI  +H+R +P   +  ++E  C             ++ G TG
Sbjct: 342  RFDREIEIRPPDKRARKEILLVHVRNVPLCDEQKVKEGLCSPGDVVDLDRIAEMTHGYTG 401

Query: 982  ADISLICREAAISAIE----------------ENLDASRITMQHLKTAIRHVQPSEIHS 1024
            AD++ + +EAA++A+                 E L    +TM+    A++ +QPS I  
Sbjct: 402  ADLAALVKEAAMNALRRFIKSGQIDLNKPIPTETLRKLVVTMKDFLDAMKVIQPSLIRE 460



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/272 (41%), Positives = 160/272 (58%), Gaps = 21/272 (7%)

Query: 386 SLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPT 444
            LRE  +   Q+  +  + T E     +G L +    +++I+ +          LG+ P 
Sbjct: 163 ELREEPVKEEQVRRKIPRVTWED----IGDLEEAKERIREIVELPLKHPELFKHLGIEPP 218

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           KG+LL+GPPG GKT LA+  A++ G     +NGPE++S+ YGESEQ L E+F+ A ++AP
Sbjct: 219 KGILLYGPPGVGKTLLAKALANEIGAYFIAINGPEIMSKYYGESEQRLREIFEEAEKNAP 278

Query: 505 AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
           A++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNRPD+I+PALR
Sbjct: 279 AIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLKERGKVIVIGATNRPDAIDPALR 338

Query: 565 RPGRLDREIEI-------DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
           RPGR DREIEI           L   ++N P          ++   L S  +   LD   
Sbjct: 339 RPGRFDREIEIRPPDKRARKEILLVHVRNVPL-----CDEQKVKEGLCSPGDVVDLDR-- 391

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
             ++  THG+ GADLAAL  EAA+  LRR+ K
Sbjct: 392 --IAEMTHGYTGADLAALVKEAAMNALRRFIK 421



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/216 (44%), Positives = 129/216 (59%), Gaps = 21/216 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
               S+G+RP KG+LL GPPG GKT LA+  A +SG N   V GPE++S+  GESE+A+ 
Sbjct: 495 EVFESMGIRPPKGILLFGPPGVGKTLLAKAAATESGANFIAVRGPEILSKWVGESEKAIR 554

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           E+F  A Q AP ++F DE+DAIAPAR  +     ++ R+V  LL  MDG+     V+VIA
Sbjct: 555 EIFRRARQVAPTIIFFDEIDAIAPARGMRHDTSGVTDRIVNQLLTEMDGIVPLQNVVVIA 614

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGME 609
           ATNRPD ++PAL RPGR DR I                 VP P +  RLEI       M 
Sbjct: 615 ATNRPDILDPALLRPGRFDRLI----------------YVPPPDKKARLEIFRIHTRKMP 658

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            +  D ++E L+  T G+ GAD+ A+C EAA++ LR
Sbjct: 659 LA-DDVDLEKLAEMTEGYTGADIEAVCREAAMIALR 693


>gi|124027197|ref|YP_001012517.1| ATPases of AAA+ class, SpoVK, putative cell division [Hyperthermus
            butylicus DSM 5456]
 gi|123977891|gb|ABM80172.1| ATPases of AAA+ class, SpoVK, putative cell division [Hyperthermus
            butylicus DSM 5456]
          Length = 737

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 157/304 (51%), Positives = 218/304 (71%), Gaps = 10/304 (3%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   V+PS +RE+ +EVP+V W+D+GG  +VK QL EA+EWP  H E F+
Sbjct: 433  LKVTMADFLEAMRHVQPSLIREIYIEVPEVHWDDIGGLDDVKQQLREAIEWPLTHPELFE 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G RPP GIL+FGPPG  KTL+A+A A+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 493  QMGVRPPKGILLFGPPGTGKTLLAKAAATESGANFIAVRGPEILSKWVGESEKAIRQIFR 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP+IIFFDEID +A  RG   D   V+DR+++QLL E+DG+    NV VIAATNR
Sbjct: 553  RARQVAPAIIFFDEIDAIAPARGMRYDTSGVTDRIVNQLLTEMDGIEPLTNVVVIAATNR 612

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP++  R EI RIH R++P + DV++  +A  +EG TGA
Sbjct: 613  PDILDPALLRPGRFDRLIYVPPPDKKSRLEILRIHTRRMPLAEDVDLELIAEKTEGYTGA 672

Query: 983  DISLICREAAISAIEENL------DASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            D+  +CREAA+ A+ E         A  + M+H + A++ + PS    +I  Y+ L+ + 
Sbjct: 673  DLEAVCREAAMIALRETFKKTGKPQAVLVRMEHFEKALQAIPPSLTPEDIRRYERLAKEL 732

Query: 1033 QRLV 1036
            +R+V
Sbjct: 733  KRMV 736



 Score =  256 bits (655), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 126/272 (46%), Positives = 179/272 (65%), Gaps = 18/272 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P+V WED+G   E K ++ E VE P KH E F+ +G  PP GIL++GPPG  KTL+A+A
Sbjct: 185  IPRVTWEDIGDLEEAKEKIREIVELPMKHPELFEHLGIEPPKGILLYGPPGVGKTLLAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+E G  F+A+ GPE+ SK+ GESE+ +R +F +A  NAPSIIF DEID +A  R +E 
Sbjct: 245  LANEIGAYFIAINGPEIMSKYYGESEQRLREIFEEAEKNAPSIIFIDEIDAIAP-RREEV 303

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  V VI ATNRPD IDPAL RPGRFDR + + PP++ 
Sbjct: 304  TG-EVEKRVVAQLLTLMDGLKERGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDKR 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI--- 1005
             R+EI ++H+R +P + DV++ ++A ++ G TGAD++ + +EAA++A+   + + RI   
Sbjct: 363  ARKEILQVHVRNMPLADDVDLDKIAEMTHGYTGADLAALAKEAAMNALRRFIKSGRIDLN 422

Query: 1006 -------------TMQHLKTAIRHVQPSEIHS 1024
                         TM     A+RHVQPS I  
Sbjct: 423  KPIPAEVLRELKVTMADFLEAMRHVQPSLIRE 454



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 103/214 (48%), Positives = 140/214 (65%), Gaps = 15/214 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A++ G     +NGPE++S+ YGESEQ L E+
Sbjct: 217 FEHLGIEPPKGILLYGPPGVGKTLLAKALANEIGAYFIAINGPEIMSKYYGESEQRLREI 276

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++AP+++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 277 FEEAEKNAPSIIFIDEIDAIAPRREEVTGEVEKRVVAQLLTLMDGLKERGRVIVIGATNR 336

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+I+PALRRPGR DREIEI                P    R EIL   +  M  +  D 
Sbjct: 337 PDAIDPALRRPGRFDREIEI--------------RPPDKRARKEILQVHVRNMPLA-DDV 381

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +++ ++  THG+ GADLAAL  EAA+  LRR+ K
Sbjct: 382 DLDKIAEMTHGYTGADLAALAKEAAMNALRRFIK 415



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/218 (45%), Positives = 132/218 (60%), Gaps = 21/218 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+RP KG+LL GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ ++
Sbjct: 491 FEQMGVRPPKGILLFGPPGTGKTLLAKAAATESGANFIAVRGPEILSKWVGESEKAIRQI 550

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q APA++F DE+DAIAPAR  +     ++ R+V  LL  MDG+     V+VIAAT
Sbjct: 551 FRRARQVAPAIIFFDEIDAIAPARGMRYDTSGVTDRIVNQLLTEMDGIEPLTNVVVIAAT 610

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHS 611
           NRPD ++PAL RPGR DR I                 VP P +  RLEIL      M  +
Sbjct: 611 NRPDILDPALLRPGRFDRLI----------------YVPPPDKKSRLEILRIHTRRMPLA 654

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
             D ++E ++  T G+ GADL A+C EAA++ LR   K
Sbjct: 655 -EDVDLELIAEKTEGYTGADLEAVCREAAMIALRETFK 691


>gi|327310719|ref|YP_004337616.1| AAA ATPase [Thermoproteus uzoniensis 768-20]
 gi|326947198|gb|AEA12304.1| AAA family ATPase, possible cell division control protein cdc48
            [Thermoproteus uzoniensis 768-20]
          Length = 730

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 158/298 (53%), Positives = 216/298 (72%), Gaps = 1/298 (0%)

Query: 723  FHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQRE 782
              +GV D +     +E    +K+ + DF +A  ++ PSA+RE+ +EVPKV+W+DVGG  E
Sbjct: 401  IQSGVVDLNQPTIPAESLERIKVTMQDFTEAMREIVPSALREIHIEVPKVRWKDVGGLAE 460

Query: 783  VKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKG 842
            VK +L EAVEWP K+ + FK+ G RPP GIL+FGPPG  KTL+A+AVA+E+G NF+AV+G
Sbjct: 461  VKQELREAVEWPLKYPQMFKKFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRG 520

Query: 843  PELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLL 902
            PE+FSKWVGESEK +R +F KAR  AP ++F DEID LA+ RG  +D   VS+RV++QLL
Sbjct: 521  PEIFSKWVGESEKMIREIFQKARMAAPCVVFIDEIDALASARGLGADSF-VSERVVAQLL 579

Query: 903  VELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP 962
             E+DG+    NV VI ATNRPD +DPALLRPGRFDR++YV PP+   R +IF IH R +P
Sbjct: 580  AEMDGIRTLENVVVIGATNRPDLVDPALLRPGRFDRIIYVPPPDFRARLDIFLIHTRNVP 639

Query: 963  CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
             + DV++ ELA  +EG +GADI L+ REA   A+ E+++A  + M+H + A+  V+PS
Sbjct: 640  LAKDVDLEELARRTEGYSGADIELVVREATFMALREDINAKEVAMRHFEAALNKVKPS 697



 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 130/277 (46%), Positives = 181/277 (65%), Gaps = 22/277 (7%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            +++P V WED+G   E K ++ E VE P +H E FK +G  PP GIL+FGPPG  KTL+A
Sbjct: 170  VKIPPVTWEDIGDLEEAKQKIRELVELPLRHPELFKHLGIEPPKGILLFGPPGTGKTLLA 229

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 230  KAVANEANAYFIAINGPEIMSKYYGESEAKLREIFDEAKKNAPAIIFIDEIDAIAPKR-E 288

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  RV++QLL  +DGL +R  + VI ATNRPD +DPAL RPGRFDR +++ PP+
Sbjct: 289  EVTG-EVEKRVVAQLLTLMDGLQERGQIVVIGATNRPDAVDPALRRPGRFDREIWINPPD 347

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
               R EI +IH R +P S DV++R+LA ++ G TGADI+ + +EAA+ A+          
Sbjct: 348  FKGRLEILQIHTRNMPLSPDVDLRKLAEMTHGYTGADIAALAKEAAMRALRRAIQSGVVD 407

Query: 998  --------ENLDASRITMQHLKTAIRHVQPS---EIH 1023
                    E+L+  ++TMQ    A+R + PS   EIH
Sbjct: 408  LNQPTIPAESLERIKVTMQDFTEAMREIVPSALREIH 444



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/259 (43%), Positives = 153/259 (59%), Gaps = 23/259 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 204 FKHLGIEPPKGILLFGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEAKLREI 263

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           FD A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     ++VI ATNR
Sbjct: 264 FDEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQIVVIGATNR 323

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREI I+               P    RLEIL      M  S  D 
Sbjct: 324 PDAVDPALRRPGRFDREIWIN--------------PPDFKGRLEILQIHTRNMPLS-PDV 368

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
           ++  L+  THG+ GAD+AAL  EAA+  LRR   IQ+    L+      E        +Q
Sbjct: 369 DLRKLAEMTHGYTGADIAALAKEAAMRALRR--AIQSGVVDLNQPTIPAESLERIKVTMQ 426

Query: 676 DSDCSRNITESSRDCLDSA 694
           D       TE+ R+ + SA
Sbjct: 427 D------FTEAMREIVPSA 439



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/212 (44%), Positives = 123/212 (58%), Gaps = 18/212 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               GLRP KG+LL GPPGTGKT LA+  A +SG N   V GPE+ S+  GESE+ + E+
Sbjct: 479 FKKFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMIREI 538

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEE-LSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +AP VVFIDE+DA+A AR  G +  +S+R+VA LL  MDG+   + V+VI ATN
Sbjct: 539 FQKARMAAPCVVFIDEIDALASARGLGADSFVSERVVAQLLAEMDGIRTLENVVVIGATN 598

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL- 613
           RPD ++PAL RPGR DR I                 VP P  R  +   L+      L  
Sbjct: 599 RPDLVDPALLRPGRFDRII----------------YVPPPDFRARLDIFLIHTRNVPLAK 642

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D ++E L+  T G+ GAD+  +  EA  + LR
Sbjct: 643 DVDLEELARRTEGYSGADIELVVREATFMALR 674


>gi|307197073|gb|EFN78441.1| Spermatogenesis-associated protein 5 [Harpegnathos saltator]
          Length = 810

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 154/273 (56%), Positives = 210/273 (76%), Gaps = 2/273 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A    +PSAM+E+++EVP V+W D+GGQ+++K +L +AVEWP K   AF+++G  P
Sbjct: 520  DFNCALTTTKPSAMKEILVEVPNVRWSDIGGQKDLKLKLKQAVEWPLKFPGAFRKMGIAP 579

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GILM+GPPGCSKT++A+A+A+E+ +NFL +KGPELFSKWVGESEKAVR +F +AR  A
Sbjct: 580  PKGILMYGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFRRARQVA 639

Query: 869  PSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
            PSI+F DEID L   R    + +G +V +RV++QLL+ELDG+    +VT++AATNRPDKI
Sbjct: 640  PSIVFIDEIDALGGERSSSSDGNGSNVQERVLAQLLIELDGITALGSVTLVAATNRPDKI 699

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            D ALLRPGR DR++YVG P+E  R+EIF I L+K+P + ++N+ +L CL+EG TGA+I  
Sbjct: 700  DKALLRPGRLDRIIYVGLPDEETRQEIFDIKLQKMPIAKEINVADLVCLTEGYTGAEIHA 759

Query: 987  ICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            IC EAA+ A+EEN++A  IT QH K A+  V P
Sbjct: 760  ICHEAAMKALEENINAETITKQHFKAALALVTP 792



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 120/210 (57%), Gaps = 19/210 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P KG+L++GPPG  KT +A+  A +S VN   + GPE+ S+  GESE+A+ EVF  
Sbjct: 575 MGIAPPKGILMYGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFRR 634

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A Q AP++VFIDE+DA+   R       G  + +R++A LL  +DG+     V ++AATN
Sbjct: 635 ARQVAPSIVFIDEIDALGGERSSSSDGNGSNVQERVLAQLLIELDGITALGSVTLVAATN 694

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+ AL RPGRLDR I +               +P    R EI    L  M  +  +
Sbjct: 695 RPDKIDKALLRPGRLDRIIYV--------------GLPDEETRQEIFDIKLQKMPIA-KE 739

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCL 644
             V  L   T G+ GA++ A+C+EAA+  L
Sbjct: 740 INVADLVCLTEGYTGAEIHAICHEAAMKAL 769



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 168/344 (48%), Gaps = 32/344 (9%)

Query: 347 TNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATV 406
           T E   P   E M+ ES    +++   +Y          S +   LP  +   +      
Sbjct: 217 TTEDDLPIALERMNLESKPLEVDYFKALY----------STKWTILPREKDRDEESILKK 266

Query: 407 EQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCA 465
             +I  +GG     A ++D++ I      ++ + G    KGVLLHGP G GK+ +A    
Sbjct: 267 TYEIKDIGGYDALIADIRDVVQIGIGKYKSVKNFG--ANKGVLLHGPVGVGKSLIANAII 324

Query: 466 HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE 525
            +     F  +  ++  ++ GE+E  L ++F+ A    P+++ +++LD++ P +     +
Sbjct: 325 SECNAKAFFAHSSDIYCKSIGETENRLKDIFNKAMSVTPSIILLEDLDSLCPMKNSSTTD 384

Query: 526 LSQRMVATLLNLMDGVCRTDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
              R++A L  L D +  T   V+V+A T++  SI+ +LRRPGR+D E E+         
Sbjct: 385 HGTRILAQLTTLFDNLHSTKSDVIVMATTSKLYSIDCSLRRPGRIDVEFEV--------- 435

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 VP+P  RLEIL  L S + ++L D  +E LS+ THGFVGADL  LC++A    +
Sbjct: 436 -----YVPTPNMRLEILTKLTSKIPNTLSDQNLEGLSLNTHGFVGADLHGLCSKAIFSAV 490

Query: 645 RRYSKIQTSSDVLHS-TGTLFEFEGHSDTMLQDSDCSRNITESS 687
           +R  +   ++ + H+  G    F+      +QD +C+   T+ S
Sbjct: 491 KRQER---NALLKHAEKGEHVSFDTEPIVTIQDFNCALTTTKPS 531



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 6/225 (2%)

Query: 775 EDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAG 834
           +D+GG   +   + + V+      ++ K  G     G+L+ GP G  K+L+A A+ SE  
Sbjct: 271 KDIGGYDALIADIRDVVQIGIGKYKSVKNFGAN--KGVLLHGPVGVGKSLIANAIISECN 328

Query: 835 LNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS 894
                    +++ K +GE+E  ++ +F KA +  PSII  +++D L  +  K S      
Sbjct: 329 AKAFFAHSSDIYCKSIGETENRLKDIFNKAMSVTPSIILLEDLDSLCPM--KNSSTTDHG 386

Query: 895 DRVMSQLLVELDGLHQ-RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
            R+++QL    D LH  + +V V+A T++   ID +L RPGR D    V  P    R EI
Sbjct: 387 TRILAQLTTLFDNLHSTKSDVIVMATTSKLYSIDCSLRRPGRIDVEFEVYVPTPNMRLEI 446

Query: 954 FRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIE 997
                 KIP + SD N+  L+  + G  GAD+  +C +A  SA++
Sbjct: 447 LTKLTSKIPNTLSDQNLEGLSLNTHGFVGADLHGLCSKAIFSAVK 491


>gi|383865969|ref|XP_003708444.1| PREDICTED: spermatogenesis-associated protein 5-like [Megachile
            rotundata]
          Length = 796

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 162/295 (54%), Positives = 217/295 (73%), Gaps = 5/295 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF  A +  +PSAM+EV++EVP V+W D+GGQ+++K +L++AVEWP +H EAF 
Sbjct: 501  LKVTSSDFNCALIVTKPSAMKEVLIEVPNVRWSDIGGQKDLKLKLIQAVEWPLRHPEAFI 560

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP G+LMFGPPGCSKT++A+A+A+E+ +NFL +KGPELFSKWVGESEKAVR +F 
Sbjct: 561  RMGITPPKGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFR 620

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESD-GVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            KAR  +PSI+F DEID L   R   S+ G +V +RV++QLL ELDG+    +VT++AATN
Sbjct: 621  KARQVSPSIVFIDEIDALGGERSSSSNTGSNVQERVLAQLLTELDGVSALGSVTLVAATN 680

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPDKID ALLRPGR DR++YV  P+   R+EIF I LR +P + DV I++L  L+EG +G
Sbjct: 681  RPDKIDKALLRPGRLDRIIYVPLPDYDTRQEIFDIKLRNMPINEDVRIQDLVELTEGYSG 740

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTA----IRHVQPSEIHSYKELSAKF 1032
            A+I  IC EAA+ A+EE+L+AS IT +H K A    I    PS I+ Y +   K 
Sbjct: 741  AEIQAICHEAAMKALEEDLNASIITKEHFKAALALIIPRTPPSLINIYNDYLNKI 795



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 16/254 (6%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTS 459
           QN    ++  I  +GG +K    +KD++    +    + +    +KG+LL+GP G GK+ 
Sbjct: 259 QNDTKQIKYKIQDVGGYNKIIQEIKDVL-DFGLGRCNNIINFYISKGILLYGPAGVGKSL 317

Query: 460 LARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR 519
           +A     +  VN FT+   ++ S++ GE+EQ L ++F  A   AP+++ I+ELD + P R
Sbjct: 318 IANALLSEYNVNSFTIYSSDIYSKSLGETEQKLKDIFIEAKAKAPSIILIEELDNLCPKR 377

Query: 520 KDGGEELSQRMVATLLNLMDGVCR-TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
                +  +R++A L  L D +    D ++++A T++ D ++ +LRRPGR+DRE EI   
Sbjct: 378 STSSSDHERRVLAQLTALFDDIQNANDNIVILATTSKLDLVDSSLRRPGRIDREFEI--- 434

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                       VP+P  R+EIL  +L  + ++L   +V  ++  THGFVGADL  LC++
Sbjct: 435 -----------YVPTPLMRVEILKKMLLNIPNTLSTDDVLNIAFVTHGFVGADLYGLCSQ 483

Query: 639 AALVCLRRYSKIQT 652
           A L  +++  K  T
Sbjct: 484 AILNAVKKQQKAAT 497



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 121/209 (57%), Gaps = 18/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P KGVL+ GPPG  KT +A+  A +S VN   + GPE+ S+  GESE+A+ EVF  
Sbjct: 562 MGITPPKGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFRK 621

Query: 499 ASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q +P++VFIDE+DA+   R    + G  + +R++A LL  +DGV     V ++AATNR
Sbjct: 622 ARQVSPSIVFIDEIDALGGERSSSSNTGSNVQERVLAQLLTELDGVSALGSVTLVAATNR 681

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+ AL RPGRLDR I + +              P    R EI    L  M  +  D 
Sbjct: 682 PDKIDKALLRPGRLDRIIYVPL--------------PDYDTRQEIFDIKLRNMPIN-EDV 726

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCL 644
            ++ L   T G+ GA++ A+C+EAA+  L
Sbjct: 727 RIQDLVELTEGYSGAEIQAICHEAAMKAL 755



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 136/257 (52%), Gaps = 11/257 (4%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            K K +DVGG  ++  ++ + +++          I      GIL++GP G  K+L+A A+ 
Sbjct: 266  KYKIQDVGGYNKIIQEIKDVLDFGLGRCNNI--INFYISKGILLYGPAGVGKSLIANALL 323

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE  +N   +   +++SK +GE+E+ ++ +F +A+A APSII  +E+D L   R   S  
Sbjct: 324  SEYNVNSFTIYSSDIYSKSLGETEQKLKDIFIEAKAKAPSIILIEELDNLCPKRSTSSS- 382

Query: 891  VSVSDRVMSQLLVELDGLHQ-RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
                 RV++QL    D +     N+ ++A T++ D +D +L RPGR DR   +  P    
Sbjct: 383  -DHERRVLAQLTALFDDIQNANDNIVILATTSKLDLVDSSLRRPGRIDREFEIYVPTPLM 441

Query: 950  REEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS----- 1003
            R EI +  L  IP + S  ++  +A ++ G  GAD+  +C +A ++A+++   A+     
Sbjct: 442  RVEILKKMLLNIPNTLSTDDVLNIAFVTHGFVGADLYGLCSQAILNAVKKQQKAATVPCL 501

Query: 1004 RITMQHLKTAIRHVQPS 1020
            ++T      A+   +PS
Sbjct: 502  KVTSSDFNCALIVTKPS 518


>gi|385805405|ref|YP_005841803.1| AAA family ATPase-domain containing protein [Fervidicoccus fontis
            Kam940]
 gi|383795268|gb|AFH42351.1| AAA family ATPase-domain containing protein [Fervidicoccus fontis
            Kam940]
          Length = 731

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 155/284 (54%), Positives = 210/284 (73%), Gaps = 1/284 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A  ++ PS +RE+ +EVP VKW D+GG  E K QL EAVEWP K+ E+FK+IG RP
Sbjct: 430  DFMEAYKEIIPSGLREIYIEVPNVKWSDIGGLEEAKQQLREAVEWPLKYPESFKKIGIRP 489

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+FGPPG  KT++A+AVA+E+  NF+AV+GPE+ SKWVGESEKA+R +F +AR  +
Sbjct: 490  PRGVLLFGPPGTGKTMLAKAVATESEANFIAVRGPEVLSKWVGESEKAIREIFRRARQYS 549

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P IIFFDEID L  IRG  SD   V++RV+SQLL E+DG+    NV VIAATNRPD IDP
Sbjct: 550  PVIIFFDEIDSLVPIRGMSSDS-YVTERVVSQLLTEMDGIESLENVIVIAATNRPDIIDP 608

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR ++L+Y+ PP++ DR EI +IH +K+P +SDV++  +A ++EG TGADI  + 
Sbjct: 609  ALLRPGRLEKLIYIPPPDKDDRLEILKIHTKKMPLASDVDLERIAEITEGYTGADIEALV 668

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKF 1032
            REA + A+ ENL A+ I M+H + A++ ++PS      E   K+
Sbjct: 669  REAGLRALRENLSATEIRMRHFEDALQVIKPSITKQMIEYYIKW 712



 Score =  233 bits (593), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 118/268 (44%), Positives = 174/268 (64%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            ++P+V +ED+GG + +  ++ E VE P K+ E FKR+G  PP G+L++G PG  KTL+A+
Sbjct: 176  KMPRVTYEDIGGLKPIVERIRELVELPLKYPEVFKRLGIEPPKGVLLYGAPGTGKTLLAK 235

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E    F+A+ GPE+ SK+ GESE+ +R +F +A+ + P+IIF DEID +A  R  E
Sbjct: 236  AVANETQAYFVAINGPEIMSKFYGESEQRLREIFEEAKKHTPAIIFIDEIDAIAPKR-DE 294

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G  V  RV++QLL  +DGL  R +V VIAATNRP+ IDPAL RPGRFDR + +  P+ 
Sbjct: 295  VIG-EVERRVVAQLLALMDGLETRGDVIVIAATNRPNAIDPALRRPGRFDREIEIPLPDR 353

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------- 996
              R EI +IH R +P + DV++ ++A ++ G TGAD++ + REAA+ A+           
Sbjct: 354  QGRLEILQIHTRNMPLAEDVDLEKIASITHGYTGADLAALSREAAMHALRRYLPKIDLNS 413

Query: 997  ----EENLDASRITMQHLKTAIRHVQPS 1020
                EE L++  +TMQ    A + + PS
Sbjct: 414  ERIPEEVLNSMVVTMQDFMEAYKEIIPS 441



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/245 (45%), Positives = 153/245 (62%), Gaps = 17/245 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      +++++ +          LG+ P KGVLL+G PGTGKT LA+  A+++   
Sbjct: 185 IGGLKPIVERIRELVELPLKYPEVFKRLGIEPPKGVLLYGAPGTGKTLLAKAVANETQAY 244

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +NGPE++S+ YGESEQ L E+F+ A +  PA++FIDE+DAIAP R +   E+ +R+V
Sbjct: 245 FVAINGPEIMSKFYGESEQRLREIFEEAKKHTPAIIFIDEIDAIAPKRDEVIGEVERRVV 304

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATNRP++I+PALRRPGR DREIEI +              
Sbjct: 305 AQLLALMDGLETRGDVIVIAATNRPNAIDPALRRPGRFDREIEIPL-------------- 350

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY-SKI 650
           P    RLEIL      M  +  D ++E ++  THG+ GADLAAL  EAA+  LRRY  KI
Sbjct: 351 PDRQGRLEILQIHTRNMPLA-EDVDLEKIASITHGYTGADLAALSREAAMHALRRYLPKI 409

Query: 651 QTSSD 655
             +S+
Sbjct: 410 DLNSE 414



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 159/303 (52%), Gaps = 37/303 (12%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL +ER   +V  SM      F+  ++           +   LRE       IE  NV+ 
Sbjct: 410 DLNSERIPEEVLNSMVVTMQDFMEAYK---------EIIPSGLRE-----IYIEVPNVKW 455

Query: 405 TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
                 S +GGL +    L++ +        +   +G+RP +GVLL GPPGTGKT LA+ 
Sbjct: 456 ------SDIGGLEEAKQQLREAVEWPLKYPESFKKIGIRPPRGVLLFGPPGTGKTMLAKA 509

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG 523
            A +S  N   V GPEV+S+  GESE+A+ E+F  A Q +P ++F DE+D++ P R    
Sbjct: 510 VATESEANFIAVRGPEVLSKWVGESEKAIREIFRRARQYSPVIIFFDEIDSLVPIRGMSS 569

Query: 524 EE-LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
           +  +++R+V+ LL  MDG+   + V+VIAATNRPD I+PAL RPGRL++ I I       
Sbjct: 570 DSYVTERVVSQLLTEMDGIESLENVIVIAATNRPDIIDPALLRPGRLEKLIYI------- 622

Query: 583 LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV 642
                    P    RLEIL      M  +  D ++E ++  T G+ GAD+ AL  EA L 
Sbjct: 623 -------PPPDKDDRLEILKIHTKKMPLA-SDVDLERIAEITEGYTGADIEALVREAGLR 674

Query: 643 CLR 645
            LR
Sbjct: 675 ALR 677


>gi|384248245|gb|EIE21729.1| nuclear AAA ATPase [Coccomyxa subellipsoidea C-169]
          Length = 563

 Score =  336 bits (862), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 166/293 (56%), Positives = 213/293 (72%), Gaps = 6/293 (2%)

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            +DF  A+ +VRPS MREV LE+P V W DVGG   +K +L EAVEWPQKH E   R+G +
Sbjct: 268  LDFRAAQTRVRPSGMREVALELPSVTWADVGGHAAIKQRLKEAVEWPQKHPEMLARMGAK 327

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
             P G+L++GPPGCSKTL+ARAVASE+GLNFLAVKG ELFS +VGESEKAV +LF++ARA 
Sbjct: 328  APRGVLLYGPPGCSKTLLARAVASESGLNFLAVKGSELFSMYVGESEKAVVTLFSRARAA 387

Query: 868  APSIIFFDEIDGLAAIRGK---ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            APSIIF DE+DGLAA R +   ES G SVSDRV+SQLLVE+DG+  R +V VIAATNRPD
Sbjct: 388  APSIIFLDEVDGLAAARSEHRSESGGPSVSDRVLSQLLVEMDGIQARGDVVVIAATNRPD 447

Query: 925  KIDPALLRPGRFDRLLYVGPPNET-DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
             +D ALLRPGRFD  LYV PP ++ DR  +  +  R  P ++DV +  LA  + G TGAD
Sbjct: 448  LVDAALLRPGRFDSRLYVPPPKDSADRASVLAVLTRATPLAADVELEALADFTPGYTGAD 507

Query: 984  ISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELS--AKFQR 1034
            +S + REA++ A++E++D + + M+H   A+  + PS   S  EL    +FQ+
Sbjct: 508  LSALVREASMKALQEDIDTTEVAMRHFSAALLEITPSPCVSGVELDMYGRFQQ 560



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/244 (46%), Positives = 159/244 (65%), Gaps = 20/244 (8%)

Query: 412 KLGGLSKEYAILKD-IIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           KLGG+S+    L++ + +          LGLR  +GVLLHGPPGTGKT+LA   A D+G 
Sbjct: 20  KLGGVSEHIKALREHVTLPLKAPQLFERLGLRLPRGVLLHGPPGTGKTALACAAAADAGA 79

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-----GEE 525
            LF +NGP+++S+  GESE  L  VF +A  +APAV+FIDELD++APAR  G      +E
Sbjct: 80  TLFVLNGPDIISEYVGESEIGLQGVFAAARAAAPAVIFIDELDSLAPARSRGAHSAAADE 139

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           ++ R+V+TLL  MD     DGV+++AA+NR D+++ ALRRPGR DRE+E+          
Sbjct: 140 MTGRVVSTLLAAMDARSGADGVIIVAASNRVDAVDSALRRPGRFDRELEV---------- 189

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
               +VPSPA RLEIL   L  + H+L +  +  L+ ++HG+VGADLAALC EAA+  +R
Sbjct: 190 ----SVPSPAGRLEILRVKLEDINHNLCEENICALAASSHGYVGADLAALCQEAAMCAVR 245

Query: 646 RYSK 649
           R  +
Sbjct: 246 RVVR 249



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 137/230 (59%), Gaps = 7/230 (3%)

Query: 774 WE---DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
           WE    +GG  E    L E V  P K  + F+R+G R P G+L+ GPPG  KT +A A A
Sbjct: 15  WEGYGKLGGVSEHIKALREHVTLPLKAPQLFERLGLRLPRGVLLHGPPGTGKTALACAAA 74

Query: 831 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
           ++AG     + GP++ S++VGESE  ++ +FA ARA AP++IF DE+D LA  R + +  
Sbjct: 75  ADAGATLFVLNGPDIISEYVGESEIGLQGVFAAARAAAPAVIFIDELDSLAPARSRGAHS 134

Query: 891 VS---VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            +   ++ RV+S LL  +D       V ++AA+NR D +D AL RPGRFDR L V  P+ 
Sbjct: 135 AAADEMTGRVVSTLLAAMDARSGADGVIIVAASNRVDAVDSALRRPGRFDRELEVSVPSP 194

Query: 948 TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAI 996
             R EI R+ L  I  +  + NI  LA  S G  GAD++ +C+EAA+ A+
Sbjct: 195 AGRLEILRVKLEDINHNLCEENICALAASSHGYVGADLAALCQEAAMCAV 244



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 157/306 (51%), Gaps = 42/306 (13%)

Query: 384 SKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKS--------- 434
           S S+RE  LP   ++F+  Q  V     +   L        D+   +++K          
Sbjct: 255 SASVREIPLPVTPLDFRAAQTRVRPSGMREVALELPSVTWADVGGHAAIKQRLKEAVEWP 314

Query: 435 -----TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESE 489
                 L+ +G +  +GVLL+GPPG  KT LAR  A +SG+N   V G E+ S   GESE
Sbjct: 315 QKHPEMLARMGAKAPRGVLLYGPPGCSKTLLARAVASESGLNFLAVKGSELFSMYVGESE 374

Query: 490 QALHEVFDSASQSAPAVVFIDELDAIAPARKD-----GGEELSQRMVATLLNLMDGVCRT 544
           +A+  +F  A  +AP+++F+DE+D +A AR +     GG  +S R+++ LL  MDG+   
Sbjct: 375 KAVVTLFSRARAAAPSIIFLDEVDGLAAARSEHRSESGGPSVSDRVLSQLLVEMDGIQAR 434

Query: 545 DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP---AQRLEIL 601
             V+VIAATNRPD ++ AL RPGR D       S L+         VP P   A R  +L
Sbjct: 435 GDVVVIAATNRPDLVDAALLRPGRFD-------SRLY---------VPPPKDSADRASVL 478

Query: 602 HALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVL-HST 660
            A+L+       D E+E L+  T G+ GADL+AL  EA++  L+    I T+   + H +
Sbjct: 479 -AVLTRATPLAADVELEALADFTPGYTGADLSALVREASMKALQ--EDIDTTEVAMRHFS 535

Query: 661 GTLFEF 666
             L E 
Sbjct: 536 AALLEI 541


>gi|389860481|ref|YP_006362720.1| AAA ATPase [Thermogladius cellulolyticus 1633]
 gi|388525384|gb|AFK50582.1| AAA family ATPase, CDC48 subfamily [Thermogladius cellulolyticus
            1633]
          Length = 739

 Score =  336 bits (862), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 161/309 (52%), Positives = 220/309 (71%), Gaps = 5/309 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF  A   V+PS +REV +EVP+V+W D+GG  +VK QL EAVEWP K+ E   
Sbjct: 431  LKVTMGDFLNALKLVQPSLIREVFVEVPEVRWSDIGGLEDVKQQLREAVEWPLKYPEIIS 490

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G  PP GIL++GPPG  KTL+A+AVA+E+G NF+A++GPE+ SKWVGESEKAVR +F 
Sbjct: 491  KMGIEPPKGILLYGPPGTGKTLLAKAVATESGANFIAIRGPEVLSKWVGESEKAVREVFR 550

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP ++FFDEID +A  RG   D   V+DR+++QLL ELDG+     V VIAATNR
Sbjct: 551  RARQVAPCVVFFDEIDSIAPARGARYDS-GVTDRIVNQLLTELDGIQPLRKVVVIAATNR 609

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP+   R EIF++H R++P +SDVN+ ELA L+EG TGA
Sbjct: 610  PDILDPALLRPGRFDRLVYVPPPDYKARLEIFKVHTRRVPLASDVNLEELARLTEGYTGA 669

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHS 1038
            DI+ + REA + A+ E L+A  + M++   A+  V+PS    +I  Y+ L+++ +R+   
Sbjct: 670  DIAAVVREAVMLALRERLEARPVEMKYFLKALEVVKPSLTKEQIEEYERLASEIKRMSGV 729

Query: 1039 NAEADESGY 1047
               A  S Y
Sbjct: 730  TRRAAPSPY 738



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/271 (46%), Positives = 180/271 (66%), Gaps = 18/271 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P+V WED+G   EVK ++ E VE P +H E F R+G  PP GIL++GPPG  KTL+A+A
Sbjct: 183  IPRVTWEDIGDLEEVKERIREIVELPLRHPELFNRLGIEPPKGILLYGPPGTGKTLLAKA 242

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+E G  F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E 
Sbjct: 243  LANEIGAYFIAINGPEIMSKFYGESEERLREVFKEAEQNAPAIIFIDEIDSIAPKR-EEV 301

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRFDR + + PP++ 
Sbjct: 302  VG-EVEKRVVAQLLTLMDGLKERGRVIVIGATNRPDALDPALRRPGRFDREIEIPPPDKR 360

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDAS 1003
             R EI  +H R +P + DV++ +LA ++ G TGAD++ + +EAA++A+     EEN+D +
Sbjct: 361  ARREILAVHTRNMPLAEDVDLTKLAEITHGYTGADLAALVKEAALAALRRFVKEENVDLN 420

Query: 1004 -----------RITMQHLKTAIRHVQPSEIH 1023
                       ++TM     A++ VQPS I 
Sbjct: 421  QSIPASKLEKLKVTMGDFLNALKLVQPSLIR 451



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/216 (49%), Positives = 141/216 (65%), Gaps = 19/216 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG+ P KG+LL+GPPGTGKT LA+  A++ G     +NGPE++S+ YGESE+ L EV
Sbjct: 215 FNRLGIEPPKGILLYGPPGTGKTLLAKALANEIGAYFIAINGPEIMSKFYGESEERLREV 274

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A Q+APA++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 275 FKEAEQNAPAIIFIDEIDSIAPKREEVVGEVEKRVVAQLLTLMDGLKERGRVIVIGATNR 334

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL--EILHALLSGMEHSLL 613
           PD+++PALRRPGR DREIEI                P P +R   EIL      M  +  
Sbjct: 335 PDALDPALRRPGRFDREIEI----------------PPPDKRARREILAVHTRNMPLA-E 377

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           D ++  L+  THG+ GADLAAL  EAAL  LRR+ K
Sbjct: 378 DVDLTKLAEITHGYTGADLAALVKEAALAALRRFVK 413



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 129/215 (60%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +S +G+ P KG+LL+GPPGTGKT LA+  A +SG N   + GPEV+S+  GESE+A+ EV
Sbjct: 489 ISKMGIEPPKGILLYGPPGTGKTLLAKAVATESGANFIAIRGPEVLSKWVGESEKAVREV 548

Query: 496 FDSASQSAPAVVFIDELDAIAP---ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q AP VVF DE+D+IAP   AR D G  ++ R+V  LL  +DG+     V+VIAA
Sbjct: 549 FRRARQVAPCVVFFDEIDSIAPARGARYDSG--VTDRIVNQLLTELDGIQPLRKVVVIAA 606

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGMEH 610
           TNRPD ++PAL RPGR DR +                 VP P    RLEI       +  
Sbjct: 607 TNRPDILDPALLRPGRFDRLV----------------YVPPPDYKARLEIFKVHTRRVPL 650

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           +  D  +E L+  T G+ GAD+AA+  EA ++ LR
Sbjct: 651 A-SDVNLEELARLTEGYTGADIAAVVREAVMLALR 684


>gi|380011891|ref|XP_003690027.1| PREDICTED: spermatogenesis-associated protein 5-like [Apis florea]
          Length = 792

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 155/277 (55%), Positives = 209/277 (75%), Gaps = 1/277 (0%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            K+ L DF +A   ++PSAM+EV++EVP V+W D+GGQ+++K +L +A+EWP  H E F R
Sbjct: 498  KITLSDFNRALTVIKPSAMKEVLIEVPNVRWSDIGGQKDLKLKLKQAIEWPLCHPEVFFR 557

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP G+LMFGPPGCSKT++A+A+A+E+ +NFL +KGPELFSKWVGESEKAVR +F K
Sbjct: 558  MGITPPKGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFRK 617

Query: 864  ARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            AR  +PSIIF DEID L   R    + G +V +RV++QLL ELDG+    +VT++AATNR
Sbjct: 618  ARQVSPSIIFIDEIDALGGERSSSVTTGSNVQERVLAQLLTELDGVTALGSVTLVAATNR 677

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PDKID ALLRPGR DR++YV  P+   R+EIF I LR +P + DV I++L  L+EG +GA
Sbjct: 678  PDKIDKALLRPGRLDRIIYVPLPDYETRQEIFDIKLRNMPIAEDVQIQDLVDLTEGYSGA 737

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            +I  IC EAAI A+EE+L+A+ IT +H K A+  + P
Sbjct: 738  EIQAICHEAAIKALEEDLNATIITKEHFKAALAIITP 774



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 121/209 (57%), Gaps = 18/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P KGVL+ GPPG  KT +A+  A +S VN   + GPE+ S+  GESE+A+ EVF  
Sbjct: 558 MGITPPKGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFRK 617

Query: 499 ASQSAPAVVFIDELDAIAPARKDG---GEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q +P+++FIDE+DA+   R      G  + +R++A LL  +DGV     V ++AATNR
Sbjct: 618 ARQVSPSIIFIDEIDALGGERSSSVTTGSNVQERVLAQLLTELDGVTALGSVTLVAATNR 677

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+ AL RPGRLDR I + +              P    R EI    L  M  +  D 
Sbjct: 678 PDKIDKALLRPGRLDRIIYVPL--------------PDYETRQEIFDIKLRNMPIA-EDV 722

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCL 644
           +++ L   T G+ GA++ A+C+EAA+  L
Sbjct: 723 QIQDLVDLTEGYSGAEIQAICHEAAIKAL 751



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 150/264 (56%), Gaps = 22/264 (8%)

Query: 394 NAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLG-LRPTKGVLLHGP 452
           N Q E++ ++  + QDI   GG  K    +KD++     KS   +LG    +KG+LL+G 
Sbjct: 251 NKQEEYKKIKYKI-QDI---GGYDKVIEDIKDVLDIGLGKS--QNLGDFYISKGILLYGT 304

Query: 453 PGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDEL 512
            G GK+ ++     +  +N  T+   ++ S++ GE+E+ L ++F  A   AP+++ I+E+
Sbjct: 305 AGVGKSIISNALISEYDINSVTIYSSDIYSKSLGETEKKLQDIFMEAKAKAPSIILIEEI 364

Query: 513 DAIAPARKDGGEELSQRMVATLLNLMDGVCRT-DGVLVIAATNRPDSIEPALRRPGRLDR 571
           D++ P R     +  +R+++ L+ L D +  T + V+++A T++ D ++ +LRRPGR+D+
Sbjct: 365 DSLCPKRSTSSTDHERRVLSQLITLFDDIQNTNNNVVILATTSKLDLVDSSLRRPGRIDK 424

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
           E EI               VP+P+ R +I   +LS + ++L   +++ ++  THGFVGAD
Sbjct: 425 EFEI--------------YVPTPSMRADIFTKMLSKIPNTLSLEDIQNIAFVTHGFVGAD 470

Query: 632 LAALCNEAALVCLRRYSKIQTSSD 655
           L  LC++A L  ++R  K    +D
Sbjct: 471 LYGLCSQAILNVVKRQPKTNIVTD 494



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 138/259 (53%), Gaps = 13/259 (5%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            K K +D+GG  +V   + + ++      +           GIL++G  G  K++++ A+ 
Sbjct: 260  KYKIQDIGGYDKVIEDIKDVLDIGLGKSQNLGDFYIS--KGILLYGTAGVGKSIISNALI 317

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE  +N + +   +++SK +GE+EK ++ +F +A+A APSII  +EID L   R   S  
Sbjct: 318  SEYDINSVTIYSSDIYSKSLGETEKKLQDIFMEAKAKAPSIILIEEIDSLCPKRSTSS-- 375

Query: 891  VSVSDRVMSQLLVELDGLHQ-RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
                 RV+SQL+   D +     NV ++A T++ D +D +L RPGR D+   +  P  + 
Sbjct: 376  TDHERRVLSQLITLFDDIQNTNNNVVILATTSKLDLVDSSLRRPGRIDKEFEIYVPTPSM 435

Query: 950  REEIFRIHLRKIPCSSDV-NIRELACLSEGCTGADISLICREAAISAIEENLD------- 1001
            R +IF   L KIP +  + +I+ +A ++ G  GAD+  +C +A ++ ++           
Sbjct: 436  RADIFTKMLSKIPNTLSLEDIQNIAFVTHGFVGADLYGLCSQAILNVVKRQPKTNIVTDF 495

Query: 1002 ASRITMQHLKTAIRHVQPS 1020
            +++IT+     A+  ++PS
Sbjct: 496  STKITLSDFNRALTVIKPS 514


>gi|315425454|dbj|BAJ47117.1| AAA family ATPase [Candidatus Caldiarchaeum subterraneum]
 gi|343484290|dbj|BAJ49944.1| AAA family ATPase [Candidatus Caldiarchaeum subterraneum]
          Length = 726

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 155/296 (52%), Positives = 215/296 (72%), Gaps = 5/296 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+   DF  A   ++PSA+REV+LE+P VKW+D+GG   +K +L EAVEWP K+ + FK
Sbjct: 426  IKVTREDFANALRTIQPSALREVVLEIPNVKWDDIGGLENLKQELREAVEWPLKYPDVFK 485

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G RPP GIL++GPPG  KTL+A+AVA+E+  NF++VKGPE+ SKWVGESEKAVR +F 
Sbjct: 486  RLGIRPPRGILLYGPPGTGKTLLAKAVATESQANFISVKGPEVLSKWVGESEKAVREIFR 545

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP IIFFDE+D +A  RG  +D   V+DR+++QLL E+DG+     V V+ ATNR
Sbjct: 546  KARETAPCIIFFDELDSIAPRRGIHTDA-GVTDRIVNQLLTEMDGMQSLKGVVVLGATNR 604

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR+LYV PP++  R  IF+IH R++P   DV++ +LA L+EG TGA
Sbjct: 605  PDILDPALLRPGRFDRVLYVPPPDKNARLAIFKIHTREMPLDQDVDLEQLAALTEGYTGA 664

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            DI  + REAA+ A  EN++A  ++M+H   A++ ++PS    E   Y  + + F++
Sbjct: 665  DIEAVVREAALIAARENINAQVVSMRHFGLALQKIKPSVGAEEKAEYDRIVSNFKK 720



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 121/273 (44%), Positives = 174/273 (63%), Gaps = 17/273 (6%)

Query: 766  ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
            I EV  V +ED+GG  +   ++ E +E P KH E F+ +G  PP G++++GPPG  KTL+
Sbjct: 176  IEEVSGVTYEDIGGLHDELQRIREMIELPLKHPELFRHLGIEPPKGVILYGPPGTGKTLI 235

Query: 826  ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
            A+A+A+E G +F+++ GPE+ SK+ GESE  +R +F +A  NAPSIIF DE+D +A  RG
Sbjct: 236  AKAIANETGAHFVSINGPEIMSKFYGESEARLREVFQEAEQNAPSIIFIDELDAIAPKRG 295

Query: 886  KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
            + +    V  RV+SQLL  +DGL  R  V VI ATNR + IDPAL RPGRFDR + +G P
Sbjct: 296  EVTG--EVERRVVSQLLTLMDGLKSRGQVVVIGATNRIEAIDPALRRPGRFDREIRIGVP 353

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------- 997
            +   R+EI  IH R++P + DVNI ELA ++ G  GADI+ + REAA++A+         
Sbjct: 354  DRNGRKEILLIHTRRMPLAEDVNIDELAEITHGFVGADIAALTREAAMNALRRFLPQIDL 413

Query: 998  -------ENLDASRITMQHLKTAIRHVQPSEIH 1023
                   E L+  ++T +    A+R +QPS + 
Sbjct: 414  EKEVIPAEVLEKIKVTREDFANALRTIQPSALR 446



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/251 (44%), Positives = 154/251 (61%), Gaps = 21/251 (8%)

Query: 399 FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGK 457
            + V     +DI   GGL  E   ++++I +          LG+ P KGV+L+GPPGTGK
Sbjct: 176 IEEVSGVTYEDI---GGLHDELQRIREMIELPLKHPELFRHLGIEPPKGVILYGPPGTGK 232

Query: 458 TSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAP 517
           T +A+  A+++G +  ++NGPE++S+ YGESE  L EVF  A Q+AP+++FIDELDAIAP
Sbjct: 233 TLIAKAIANETGAHFVSINGPEIMSKFYGESEARLREVFQEAEQNAPSIIFIDELDAIAP 292

Query: 518 ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
            R +   E+ +R+V+ LL LMDG+     V+VI ATNR ++I+PALRRPGR DREI I  
Sbjct: 293 KRGEVTGEVERRVVSQLLTLMDGLKSRGQVVVIGATNRIEAIDPALRRPGRFDREIRI-- 350

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL-DSEVEYLSMATHGFVGADLAALC 636
                        VP    R EIL  L+      L  D  ++ L+  THGFVGAD+AAL 
Sbjct: 351 ------------GVPDRNGRKEIL--LIHTRRMPLAEDVNIDELAEITHGFVGADIAALT 396

Query: 637 NEAALVCLRRY 647
            EAA+  LRR+
Sbjct: 397 REAAMNALRRF 407



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/224 (41%), Positives = 130/224 (58%), Gaps = 22/224 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               LG+RP +G+LL+GPPGTGKT LA+  A +S  N  +V GPEV+S+  GESE+A+ E
Sbjct: 483 VFKRLGIRPPRGILLYGPPGTGKTLLAKAVATESQANFISVKGPEVLSKWVGESEKAVRE 542

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           +F  A ++AP ++F DELD+IAP R    D G  ++ R+V  LL  MDG+    GV+V+ 
Sbjct: 543 IFRKARETAPCIIFFDELDSIAPRRGIHTDAG--VTDRIVNQLLTEMDGMQSLKGVVVLG 600

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD ++PAL RPGR DR        L+         VP P +   +    +   E  
Sbjct: 601 ATNRPDILDPALLRPGRFDR-------VLY---------VPPPDKNARLAIFKIHTREMP 644

Query: 612 L-LDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSS 654
           L  D ++E L+  T G+ GAD+ A+  EAAL+  R     Q  S
Sbjct: 645 LDQDVDLEQLAALTEGYTGADIEAVVREAALIAARENINAQVVS 688


>gi|154288250|ref|XP_001544920.1| ribosome biogenesis ATPase RIX7 [Ajellomyces capsulatus NAm1]
 gi|150408561|gb|EDN04102.1| ribosome biogenesis ATPase RIX7 [Ajellomyces capsulatus NAm1]
          Length = 712

 Score =  335 bits (859), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 224/633 (35%), Positives = 331/633 (52%), Gaps = 118/633 (18%)

Query: 409  DISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
            +++ LGG+      L+D+++    +  + SS  ++P +GVLLHGPPG GKT +A   A +
Sbjct: 175  NLADLGGVDDIIQELEDLLVLPMTRPQVYSSSKVQPPRGVLLHGPPGCGKTMIANAFAAE 234

Query: 468  SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
             GV    ++ P +VS   GESE+A+ E FD A + AP ++FIDE+DAI P R+    E+ 
Sbjct: 235  LGVPFIAISAPSIVSGMSGESEKAIREHFDEAKKVAPCLIFIDEIDAITPKRESAQREME 294

Query: 528  QRMVATLLNLMDGVC--RTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSL 583
            +R+VA LL  MD +   +TDG  V+V+AATNRPDS++ ALRR                  
Sbjct: 295  KRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRR------------------ 336

Query: 584  LKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
                     +P +R                          T GFVGADL  L +   +  
Sbjct: 337  ---------APGKR--------------------------TPGFVGADLNDLVS-PLIAA 360

Query: 644  LRRYSKIQTS--SDVLHSTGTLFEFEGHSDTMLQDS--DCSRNITESSRDCLDSASPCTS 699
            ++RY ++  S   D +    T  E +G+ ++++     +  R I  +    LDS +   S
Sbjct: 361  IKRYIELLKSHTGDEMDIGDTANEDDGNRNSIISPKILELRRLIKHARETPLDSEAQTVS 420

Query: 700  DLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRP 759
                                       VS++                  DF  A  K++P
Sbjct: 421  ---------------------------VSNT------------------DFFTALPKIQP 435

Query: 760  SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            S+ RE    +P   W D+G    V+ +L  A+  P ++ + + R+G   PTG+L++GPPG
Sbjct: 436  SSKREGFATIPDTTWADIGALSGVRDELATAIVEPIRNPDIYARVGITAPTGVLLWGPPG 495

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
            C KTL+A+AVA+E+  NF++VKGPEL +K+VGESE+AVR +F +AR++ P +IFFDE+D 
Sbjct: 496  CGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFVRARSSVPCVIFFDELDA 555

Query: 880  LAAIRGKESDGVS-VSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFD 937
            L   R    D +S  S RV++ LL ELDGL   R  + VIAATNRPD IDPA+LRPGR +
Sbjct: 556  LVPRR---DDTLSEASARVVNTLLTELDGLGSARQGIYVIAATNRPDIIDPAMLRPGRLE 612

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
             LL+V  P+  +R EI +  LRK+P     NI  LA   EG +GAD+  + R A  SAI+
Sbjct: 613  TLLFVNLPSADERVEILQTLLRKLPIEFSDNIEGLARSCEGFSGADLGSLLRRAGYSAIK 672

Query: 998  ENLDASRITMQHLKTAIRHVQP--SEIHSYKEL 1028
                   I  +    A   ++P  S++  Y++L
Sbjct: 673  RR---DTIRFEDFVAAKAGIRPSVSDLRKYEKL 702



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 155/304 (50%), Gaps = 28/304 (9%)

Query: 359 MDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSK 418
           +D E+    +++       P +   SK  REG        F  +  T   DI  L G+  
Sbjct: 412 LDSEAQTVSVSNTDFFTALPKIQPSSK--REG--------FATIPDTTWADIGALSGVRD 461

Query: 419 EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGP 478
           E A    I+         + +G+    GVLL GPPG GKT LA+  A++S  N  +V GP
Sbjct: 462 ELATA--IVEPIRNPDIYARVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKGP 519

Query: 479 EVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLM 538
           E++++  GESE+A+ +VF  A  S P V+F DELDA+ P R D   E S R+V TLL  +
Sbjct: 520 ELLNKYVGESERAVRQVFVRARSSVPCVIFFDELDALVPRRDDTLSEASARVVNTLLTEL 579

Query: 539 DGVCRT-DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQR 597
           DG+     G+ VIAATNRPD I+PA+ RPGRL+       + LF  L       PS  +R
Sbjct: 580 DGLGSARQGIYVIAATNRPDIIDPAMLRPGRLE-------TLLFVNL-------PSADER 625

Query: 598 LEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVL 657
           +EIL  LL  +     D+ +E L+ +  GF GADL +L   A    ++R   I+    V 
Sbjct: 626 VEILQTLLRKLPIEFSDN-IEGLARSCEGFSGADLGSLLRRAGYSAIKRRDTIRFEDFVA 684

Query: 658 HSTG 661
              G
Sbjct: 685 AKAG 688



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 98/169 (57%), Gaps = 7/169 (4%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V   D+GG  ++  +L + +  P    + +     +PP G+L+ GPPGC KT++A A A+
Sbjct: 174 VNLADLGGVDDIIQELEDLLVLPMTRPQVYSSSKVQPPRGVLLHGPPGCGKTMIANAFAA 233

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           E G+ F+A+  P + S   GESEKA+R  F +A+  AP +IF DEID +   R  ES   
Sbjct: 234 ELGVPFIAISAPSIVSGMSGESEKAIREHFDEAKKVAPCLIFIDEIDAITPKR--ESAQR 291

Query: 892 SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLR-PGR 935
            +  R+++QLL  +D L         V V+AATNRPD +D AL R PG+
Sbjct: 292 EMEKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRAPGK 340


>gi|405962734|gb|EKC28383.1| Spermatogenesis-associated protein 5 [Crassostrea gigas]
          Length = 741

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 158/284 (55%), Positives = 209/284 (73%)

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
            + + G   K++L D   A   ++PSAMRE+ LE+PKV W D+GGQ EVK +L +AVEWP 
Sbjct: 436  IEDVGKGTKIKLCDVTAAMTTIQPSAMREIQLEIPKVHWSDIGGQEEVKLKLKQAVEWPL 495

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            +H EAF R+G  PP GILM+GPPGCSKT++A+A+A+E+GLNFLAVKGPELFSKWVGESE+
Sbjct: 496  RHPEAFSRMGITPPRGILMYGPPGCSKTMIAKALATESGLNFLAVKGPELFSKWVGESER 555

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            AVR +F KARA APSIIFFDEID LA  RG  S   SV DRV++QLL E+DG+    +VT
Sbjct: 556  AVREVFRKARAAAPSIIFFDEIDALAIERGSSSGSSSVGDRVLAQLLTEIDGVQSLRDVT 615

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL 975
            V+AATNRPD ID AL+RPGR DR+LYV  P+   R +IF IHL ++P  S V++ +L   
Sbjct: 616  VVAATNRPDMIDKALMRPGRLDRILYVPLPDLPTRRQIFTIHLNRMPTGSTVDVDKLVIA 675

Query: 976  SEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            ++  +GA++S +C EAA+ A++E++ + R+  +H   A   V P
Sbjct: 676  TDKYSGAEVSAVCHEAAMFALQEDILSKRVEQRHFDKAFTVVSP 719



 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 128/213 (60%), Gaps = 19/213 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S +G+ P +G+L++GPPG  KT +A+  A +SG+N   V GPE+ S+  GESE+A+ EV
Sbjct: 501 FSRMGITPPRGILMYGPPGCSKTMIAKALATESGLNFLAVKGPELFSKWVGESERAVREV 560

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A  +AP+++F DE+DA+A  R    G   +  R++A LL  +DGV     V V+AAT
Sbjct: 561 FRKARAAAPSIIFFDEIDALAIERGSSSGSSSVGDRVLAQLLTEIDGVQSLRDVTVVAAT 620

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM-EHSL 612
           NRPD I+ AL RPGRLDR        L+  L + P        R +I    L+ M   S 
Sbjct: 621 NRPDMIDKALMRPGRLDR-------ILYVPLPDLPT-------RRQIFTIHLNRMPTGST 666

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           +D  V+ L +AT  + GA+++A+C+EAA+  L+
Sbjct: 667 VD--VDKLVIATDKYSGAEVSAVCHEAAMFALQ 697



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 137/244 (56%), Gaps = 41/244 (16%)

Query: 408 QDISKLGGLSKEYAILKD-IIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAH 466
           QDI   GG+S + A +++ +++        SS GL   +G+LL GP GTGK+ L +   +
Sbjct: 227 QDI---GGMSAQIAAIRETVMLPLKSPHLFSSSGLPFPRGILLFGPSGTGKSMLIQAMCN 283

Query: 467 DSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEEL 526
           +  ++  TV+   ++S+                   AP+++ +D++D++   R     E 
Sbjct: 284 EMNIHTATVSTTNIISK-------------------APSIIVMDDIDSMFANRDKTQNEA 324

Query: 527 SQRMVATLLNLMDGVCRTDG----VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
            +R+V+TLL LMDG+         V+V+AAT RP+S++PALRRPGRLDRE+E+       
Sbjct: 325 LRRLVSTLLTLMDGIVSKSSPDKFVMVLAATVRPESLDPALRRPGRLDREVEV------- 377

Query: 583 LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV 642
                   VP+  +RLEIL  LLS + +SL + + + ++  THG+VGAD+  LC +A + 
Sbjct: 378 -------GVPTAKERLEILEKLLSNIPNSLGEDDRKQIADTTHGYVGADILCLCQQANIN 430

Query: 643 CLRR 646
            ++R
Sbjct: 431 AIKR 434



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 133/264 (50%), Gaps = 30/264 (11%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG       + E V  P K    F   G   P GIL+FGP G  K+++ +A+ +
Sbjct: 224  VTFQDIGGMSAQIAAIRETVMLPLKSPHLFSSSGLPFPRGILLFGPSGTGKSMLIQAMCN 283

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E  ++   V    + SK                   APSII  D+ID + A R K  +  
Sbjct: 284  EMNIHTATVSTTNIISK-------------------APSIIVMDDIDSMFANRDKTQN-- 322

Query: 892  SVSDRVMSQLLVELDGLHQRVN----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
                R++S LL  +DG+  + +    V V+AAT RP+ +DPAL RPGR DR + VG P  
Sbjct: 323  EALRRLVSTLLTLMDGIVSKSSPDKFVMVLAATVRPESLDPALRRPGRLDREVEVGVPTA 382

Query: 948  TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLD----A 1002
             +R EI    L  IP S  + + +++A  + G  GADI  +C++A I+AI+  ++     
Sbjct: 383  KERLEILEKLLSNIPNSLGEDDRKQIADTTHGYVGADILCLCQQANINAIKREIEDVGKG 442

Query: 1003 SRITMQHLKTAIRHVQPSEIHSYK 1026
            ++I +  +  A+  +QPS +   +
Sbjct: 443  TKIKLCDVTAAMTTIQPSAMREIQ 466


>gi|328787695|ref|XP_625214.3| PREDICTED: spermatogenesis-associated protein 5-like [Apis mellifera]
          Length = 793

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 154/277 (55%), Positives = 209/277 (75%), Gaps = 1/277 (0%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            K+ + DF +A   ++PSAM+EV++EVP V+W D+GGQ+++K +L +A+EWP  H E F R
Sbjct: 499  KVTISDFNRALTVIKPSAMKEVLIEVPNVRWSDIGGQKDLKLKLKQAIEWPLCHPEVFFR 558

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP G+LMFGPPGCSKT++A+A+A+E+ +NFL +KGPELFSKWVGESEKAVR +F K
Sbjct: 559  MGITPPKGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFRK 618

Query: 864  ARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            AR  +PSIIF DEID L   R    + G +V +RV++QLL ELDG+    +VT++AATNR
Sbjct: 619  ARQVSPSIIFIDEIDALGGERSSSVTAGSNVQERVLAQLLTELDGVTALGSVTLVAATNR 678

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PDKID ALLRPGR DR++YV  P+   R+EIF I LR +P + DV I++L  L+EG +GA
Sbjct: 679  PDKIDKALLRPGRLDRIIYVPLPDYETRQEIFDIKLRNMPIAEDVQIQDLVDLTEGYSGA 738

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            +I  IC EAAI A+EE+L+A+ IT +H K A+  + P
Sbjct: 739  EIQAICHEAAIKALEEDLNATIITKEHFKAALAIITP 775



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 121/209 (57%), Gaps = 18/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P KGVL+ GPPG  KT +A+  A +S VN   + GPE+ S+  GESE+A+ EVF  
Sbjct: 559 MGITPPKGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFRK 618

Query: 499 ASQSAPAVVFIDELDAIAPARKD---GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q +P+++FIDE+DA+   R      G  + +R++A LL  +DGV     V ++AATNR
Sbjct: 619 ARQVSPSIIFIDEIDALGGERSSSVTAGSNVQERVLAQLLTELDGVTALGSVTLVAATNR 678

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+ AL RPGRLDR I + +              P    R EI    L  M  +  D 
Sbjct: 679 PDKIDKALLRPGRLDRIIYVPL--------------PDYETRQEIFDIKLRNMPIA-EDV 723

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCL 644
           +++ L   T G+ GA++ A+C+EAA+  L
Sbjct: 724 QIQDLVDLTEGYSGAEIQAICHEAAIKAL 752



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 174/339 (51%), Gaps = 32/339 (9%)

Query: 320 GNLVAVPMLSEISIFLVIGANKLPADLTNER-SQPQVTESMDHESNAFVINHETKVYLYP 378
           GN  ++P   +  I+ +I   K+ +D   E  + PQ  + ++         H+ K Y   
Sbjct: 186 GNKFSIPFYGKRLIYKII---KIISDNCGENINLPQQFKQLNFADQI----HDIKFY--- 235

Query: 379 PLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSS 438
                  + +   L   Q + Q     ++  I  +GG  K    +KD++     KS   +
Sbjct: 236 ---KAFYNTKWTILNEEQNKKQEEYKKIKYKIQDIGGYDKVIEDIKDVLDIGLGKS--QN 290

Query: 439 LG-LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
           LG    +KG+LL+G  G GK+ ++     +  +N  T+   ++ S++ GE+E+ L ++F 
Sbjct: 291 LGDFYISKGILLYGTAGVGKSIISNALISEYDINSVTIYSSDIYSKSLGETEKKLQDIFM 350

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRT-DGVLVIAATNRP 556
            A   AP+++ I+E+D++ P R     +  +R+++ L+ L D +  T + V+++A T++ 
Sbjct: 351 EAKAKAPSIILIEEIDSLCPKRSTSSTDHERRVLSQLITLFDDIQNTNNNVVILATTSKL 410

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D ++ +LRRPGR+D+E EI               VP+P+ R +I   +LS + ++L   +
Sbjct: 411 DLVDSSLRRPGRIDKEFEI--------------YVPTPSMRADIFKKMLSKIPNTLSLED 456

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
           ++ ++  THGFVGADL  LC++A L  ++   K   ++D
Sbjct: 457 IQNIAFVTHGFVGADLYGLCSQAILNVVKHQPKTNVATD 495



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 139/259 (53%), Gaps = 13/259 (5%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            K K +D+GG  +V   + + ++      +           GIL++G  G  K++++ A+ 
Sbjct: 261  KYKIQDIGGYDKVIEDIKDVLDIGLGKSQNLGDFYIS--KGILLYGTAGVGKSIISNALI 318

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE  +N + +   +++SK +GE+EK ++ +F +A+A APSII  +EID L   R   S  
Sbjct: 319  SEYDINSVTIYSSDIYSKSLGETEKKLQDIFMEAKAKAPSIILIEEIDSLCPKRSTSS-- 376

Query: 891  VSVSDRVMSQLLVELDGLHQ-RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
                 RV+SQL+   D +     NV ++A T++ D +D +L RPGR D+   +  P  + 
Sbjct: 377  TDHERRVLSQLITLFDDIQNTNNNVVILATTSKLDLVDSSLRRPGRIDKEFEIYVPTPSM 436

Query: 950  REEIFRIHLRKIPCSSDV-NIRELACLSEGCTGADISLICREAAISAIEENLD------- 1001
            R +IF+  L KIP +  + +I+ +A ++ G  GAD+  +C +A ++ ++           
Sbjct: 437  RADIFKKMLSKIPNTLSLEDIQNIAFVTHGFVGADLYGLCSQAILNVVKHQPKTNVATDF 496

Query: 1002 ASRITMQHLKTAIRHVQPS 1020
            ++++T+     A+  ++PS
Sbjct: 497  STKVTISDFNRALTVIKPS 515


>gi|347522665|ref|YP_004780235.1| AAA family ATPase, CDC48 subfamily [Pyrolobus fumarii 1A]
 gi|343459547|gb|AEM37983.1| AAA family ATPase, CDC48 subfamily [Pyrolobus fumarii 1A]
          Length = 738

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 148/278 (53%), Positives = 212/278 (76%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF  A  ++ PS +RE+ +EVP+V W+D+GG  +VK QL EAVEWP KH E F+
Sbjct: 427  MEVRMEDFLAALREIVPSGLREIYVEVPEVHWDDIGGLEDVKQQLREAVEWPLKHPEVFQ 486

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G RPP GIL+FGPPG  KTL+A+A A+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 487  RLGIRPPKGILLFGPPGVGKTLLAKAAATESGANFIAVRGPEILSKWVGESEKAIREIFR 546

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR +AP+IIFFDEID +A  R +  D   V+ R+++QLL E+DG+    NV VIAATNR
Sbjct: 547  KARQHAPAIIFFDEIDAIAPARAEVPDTSGVTYRIVNQLLTEIDGIVPLQNVVVIAATNR 606

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFD+++YV PP++  R EI RIH R  P + DV++  +A ++EG +GA
Sbjct: 607  PDILDPALLRPGRFDKIIYVPPPDKKARLEILRIHTRHTPLADDVDLEYIASVTEGYSGA 666

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            D+  + REAA++A+ E+++A+++ M+H + A++ V+PS
Sbjct: 667  DLEALVREAALAALREDINATKVHMRHFEEALKRVKPS 704



 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 122/267 (45%), Positives = 176/267 (65%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP+V +ED+GG ++V  ++ E VE P KH E FKR+G  PP GIL++GPPG  KTL+A+A
Sbjct: 180  VPRVTYEDIGGMKDVIQKVRELVELPLKHPELFKRLGIEPPKGILLYGPPGVGKTLLAKA 239

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+E    F+A+ GPE+ SK+ GESE+ +R +F +A+ +AP+IIF DEID +A  R  E 
Sbjct: 240  IANETDAYFIAINGPEIMSKYYGESEQRLREIFEEAKKHAPAIIFIDEIDAIAPKR-DEV 298

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL  R +V VIAATNRP+ IDPAL RPGRFDR + +  P++ 
Sbjct: 299  IG-EVERRVVAQLLALMDGLESRGDVIVIAATNRPNAIDPALRRPGRFDREIEIPLPDKQ 357

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EI +IH R +P + DV++ +LA +++G TGAD++ + REAA+ A+            
Sbjct: 358  GRLEILQIHTRNMPLAEDVDLEKLAEMTKGFTGADLAALVREAAMHALRRYLPEIDLDKD 417

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E L+   + M+    A+R + PS
Sbjct: 418  TIPPELLEKMEVRMEDFLAALREIVPS 444



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/252 (44%), Positives = 154/252 (61%), Gaps = 19/252 (7%)

Query: 397 IEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGT 455
           +E  NV     +DI   GG+      +++++ +          LG+ P KG+LL+GPPG 
Sbjct: 175 VEQSNVPRVTYEDI---GGMKDVIQKVRELVELPLKHPELFKRLGIEPPKGILLYGPPGV 231

Query: 456 GKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAI 515
           GKT LA+  A+++      +NGPE++S+ YGESEQ L E+F+ A + APA++FIDE+DAI
Sbjct: 232 GKTLLAKAIANETDAYFIAINGPEIMSKYYGESEQRLREIFEEAKKHAPAIIFIDEIDAI 291

Query: 516 APARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI 575
           AP R +   E+ +R+VA LL LMDG+     V+VIAATNRP++I+PALRRPGR DREIEI
Sbjct: 292 APKRDEVIGEVERRVVAQLLALMDGLESRGDVIVIAATNRPNAIDPALRRPGRFDREIEI 351

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
            +              P    RLEIL      M  +  D ++E L+  T GF GADLAAL
Sbjct: 352 PL--------------PDKQGRLEILQIHTRNMPLA-EDVDLEKLAEMTKGFTGADLAAL 396

Query: 636 CNEAALVCLRRY 647
             EAA+  LRRY
Sbjct: 397 VREAAMHALRRY 408



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/218 (45%), Positives = 131/218 (60%), Gaps = 25/218 (11%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                LG+RP KG+LL GPPG GKT LA+  A +SG N   V GPE++S+  GESE+A+ 
Sbjct: 483 EVFQRLGIRPPKGILLFGPPGVGKTLLAKAAATESGANFIAVRGPEILSKWVGESEKAIR 542

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIA 551
           E+F  A Q APA++F DE+DAIAPAR +  +   ++ R+V  LL  +DG+     V+VIA
Sbjct: 543 EIFRKARQHAPAIIFFDEIDAIAPARAEVPDTSGVTYRIVNQLLTEIDGIVPLQNVVVIA 602

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGME 609
           ATNRPD ++PAL RPGR D+ I                 VP P +  RLEIL        
Sbjct: 603 ATNRPDILDPALLRPGRFDKII----------------YVPPPDKKARLEILRI---HTR 643

Query: 610 HSLL--DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           H+ L  D ++EY++  T G+ GADL AL  EAAL  LR
Sbjct: 644 HTPLADDVDLEYIASVTEGYSGADLEALVREAALAALR 681


>gi|156937486|ref|YP_001435282.1| ATPase AAA [Ignicoccus hospitalis KIN4/I]
 gi|156566470|gb|ABU81875.1| AAA family ATPase, CDC48 subfamily [Ignicoccus hospitalis KIN4/I]
          Length = 734

 Score =  334 bits (857), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 148/278 (53%), Positives = 210/278 (75%), Gaps = 1/278 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + DF  A   + PS +RE+ +E P+V WEDVGG +E K QL EAVEWP K+ EAF+
Sbjct: 426  MKVTMEDFINAYKDIVPSGLREIYIETPEVHWEDVGGLKEAKQQLREAVEWPLKYPEAFR 485

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP GIL+FGPPG  KTL+A+A A+E+  NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 486  RLGIEPPKGILLFGPPGTGKTLLAKAAATESQANFIAVRGPEILSKWVGESEKAIREIFR 545

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+I+FFDEID +A +RG ++    V++R++SQLL E+DG+ +  NV VIA+TNR
Sbjct: 546  KARQAAPTIVFFDEIDSIAPVRGMDT-STQVTERIVSQLLTEMDGIERLGNVVVIASTNR 604

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFD+L+YV PP++  R +I +IH R +P   DV++  LA ++EG TGA
Sbjct: 605  PDMVDPALLRPGRFDKLIYVPPPDKEARFQILKIHTRNMPLDMDVDLWRLAEMTEGYTGA 664

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            D+  +CREA + A+ EN++ ++++M+H   A++ V+PS
Sbjct: 665  DLEALCREAGMEAMRENINTTKVSMRHFLNALKRVKPS 702



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 119/267 (44%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VPKV WED+GG   V  +L E +E P K+ E FKR+G  PP G+L+FGPPG  KT++A+A
Sbjct: 179  VPKVTWEDIGGLENVVRKLRELIELPMKYPEIFKRLGIEPPKGVLLFGPPGTGKTMLAKA 238

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+E   +F+ + GPE+ SK+ GESE+ +R +F +AR NAPSIIF DEID +A  R +E 
Sbjct: 239  LANEIDAHFIPINGPEIMSKYYGESEQRLREIFEEARKNAPSIIFIDEIDAIAPKR-EEV 297

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  V VI ATNRP+ IDPAL RPGR +  + +  P++ 
Sbjct: 298  TG-EVEKRVVAQLLTLMDGLQERGRVVVIGATNRPNAIDPALRRPGRLEVEIEIPLPDKK 356

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN--------- 999
             R EI +IH R +P + DV++ +LA ++ G TGAD++ + R AA  A+            
Sbjct: 357  GRLEILQIHTRNMPLAEDVDLEKLAEMTHGYTGADLAALVRSAAFYALRRYLPEIDLDKG 416

Query: 1000 ------LDASRITMQHLKTAIRHVQPS 1020
                  LD  ++TM+    A + + PS
Sbjct: 417  EIPPDLLDRMKVTMEDFINAYKDIVPS 443



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/252 (44%), Positives = 153/252 (60%), Gaps = 19/252 (7%)

Query: 397 IEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGT 455
           +E   V     +DI   GGL      L+++I +          LG+ P KGVLL GPPGT
Sbjct: 174 VEHARVPKVTWEDI---GGLENVVRKLRELIELPMKYPEIFKRLGIEPPKGVLLFGPPGT 230

Query: 456 GKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAI 515
           GKT LA+  A++   +   +NGPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+DAI
Sbjct: 231 GKTMLAKALANEIDAHFIPINGPEIMSKYYGESEQRLREIFEEARKNAPSIIFIDEIDAI 290

Query: 516 APARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI 575
           AP R++   E+ +R+VA LL LMDG+     V+VI ATNRP++I+PALRRPGRL+ EIEI
Sbjct: 291 APKREEVTGEVEKRVVAQLLTLMDGLQERGRVVVIGATNRPNAIDPALRRPGRLEVEIEI 350

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
            +              P    RLEIL      M  +  D ++E L+  THG+ GADLAAL
Sbjct: 351 PL--------------PDKKGRLEILQIHTRNMPLA-EDVDLEKLAEMTHGYTGADLAAL 395

Query: 636 CNEAALVCLRRY 647
              AA   LRRY
Sbjct: 396 VRSAAFYALRRY 407



 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/271 (38%), Positives = 149/271 (54%), Gaps = 36/271 (13%)

Query: 381 NAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSL 439
           + V   LRE  +   ++ +++V           GGL +    L++ +            L
Sbjct: 439 DIVPSGLREIYIETPEVHWEDV-----------GGLKEAKQQLREAVEWPLKYPEAFRRL 487

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+ P KG+LL GPPGTGKT LA+  A +S  N   V GPE++S+  GESE+A+ E+F  A
Sbjct: 488 GIEPPKGILLFGPPGTGKTLLAKAAATESQANFIAVRGPEILSKWVGESEKAIREIFRKA 547

Query: 500 SQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
            Q+AP +VF DE+D+IAP R  D   ++++R+V+ LL  MDG+ R   V+VIA+TNRPD 
Sbjct: 548 RQAAPTIVFFDEIDSIAPVRGMDTSTQVTERIVSQLLTEMDGIERLGNVVVIASTNRPDM 607

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSE 616
           ++PAL RPGR D+ I                 VP P +  R +IL      M    LD +
Sbjct: 608 VDPALLRPGRFDKLI----------------YVPPPDKEARFQILKIHTRNMP---LDMD 648

Query: 617 VEYLSMA--THGFVGADLAALCNEAALVCLR 645
           V+   +A  T G+ GADL ALC EA +  +R
Sbjct: 649 VDLWRLAEMTEGYTGADLEALCREAGMEAMR 679


>gi|154273000|ref|XP_001537352.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150415864|gb|EDN11208.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 672

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 219/587 (37%), Positives = 313/587 (53%), Gaps = 89/587 (15%)

Query: 442  RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
            R + G+L++GP GTGK++L           + TVN   V+++N G+ E  L ++F  A Q
Sbjct: 157  RNSGGILIYGPKGTGKSTLLSKLGAAGWKKVLTVNS-SVLNRNRGDGEVLLRKIFTEALQ 215

Query: 502  SAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
            S P ++ ID+LD +AP  +     +   +   L +L D       VLV A T  P+ ++ 
Sbjct: 216  SQPCLIAIDQLDYLAPKNRPNDSSICSALCEALDSLQDA-----KVLVAACTRHPNDVDD 270

Query: 562  ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
             LR P R   EIE+               VP+   R EIL ++  G  +   D ++  L+
Sbjct: 271  NLRTPHRFGVEIEL--------------PVPTAKGREEILLSI-RGTSNVPNDHQLAKLA 315

Query: 622  MATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSR 681
              THG+VGADL +L     L C     K QT          + + E       Q   CS 
Sbjct: 316  ERTHGYVGADLFSLLQ---LSC----RKAQTRQ--------ILQLE-------QGKSCS- 352

Query: 682  NITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC 741
                S +     A+P  S  P                  +NF                  
Sbjct: 353  ----SEQHISGLATPSESGAPD-----------------ENF------------------ 373

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             L+++  D   A  + RP+AMREV LE PKVKW D+GG  E+K +L +AVE P K  +  
Sbjct: 374  -LQIDDTDISLALQETRPTAMREVFLETPKVKWSDIGGLHEIKERLRKAVERPLKFPDRM 432

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            KR+      GIL++GPPGCSKTLM +A+A+EAGLNFLAVKG E+ S +VGESE+A+R +F
Sbjct: 433  KRLNISGKKGILLYGPPGCSKTLMVKALATEAGLNFLAVKGAEILSMYVGESERALREIF 492

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR+ +PSIIFFDEID +A+ RG  +  G      V++ LL E+DG+ +  NV V+AAT
Sbjct: 493  RKARSASPSIIFFDEIDAIASRRGSSAVQGGGGGINVLTTLLNEMDGIEELKNVLVVAAT 552

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            N+P+ +DPAL+RPGR D +LY+GPP+   R+EI  I + K     DV+I  LA ++EG +
Sbjct: 553  NKPEVLDPALMRPGRLDNILYIGPPDVQARKEILNIWISKSEVDDDVDIDMLAEVTEGYS 612

Query: 981  GADISLICREAAISAIEENLDAS---RITMQHLKTAIRHVQPSEIHS 1024
            GA++  IC  AA SA++E  +     RI  +H ++A+  V P +I S
Sbjct: 613  GAEMVNICETAADSALDEEEETGRQQRIGWRHFESALDQV-PRQISS 658



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 122/210 (58%), Gaps = 22/210 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L +   KG+LL+GPPG  KT + +  A ++G+N   V G E++S   GESE+AL E+
Sbjct: 432 MKRLNISGKKGILLYGPPGCSKTLMVKALATEAGLNFLAVKGAEILSMYVGESERALREI 491

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-----KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           F  A  ++P+++F DE+DAIA  R     + GG  ++  ++ TLLN MDG+     VLV+
Sbjct: 492 FRKARSASPSIIFFDEIDAIASRRGSSAVQGGGGGIN--VLTTLLNEMDGIEELKNVLVV 549

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATN+P+ ++PAL RPGRLD           ++L   P   P    R EIL+  +S  E 
Sbjct: 550 AATNKPEVLDPALMRPGRLD-----------NILYIGP---PDVQARKEILNIWISKSEV 595

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAA 640
              D +++ L+  T G+ GA++  +C  AA
Sbjct: 596 D-DDVDIDMLAEVTEGYSGAEMVNICETAA 624


>gi|429217360|ref|YP_007175350.1| AAA ATPase [Caldisphaera lagunensis DSM 15908]
 gi|429133889|gb|AFZ70901.1| AAA family ATPase, CDC48 subfamily [Caldisphaera lagunensis DSM
            15908]
          Length = 723

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 151/297 (50%), Positives = 218/297 (73%), Gaps = 4/297 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++ +  F +A   +RPS +RE+ +EVP+V WED+GG   VK +L E+VEWP K+ + F 
Sbjct: 424  LEVSMKHFTEAMKSIRPSLIREIFVEVPEVHWEDIGGLENVKQELRESVEWPMKYPKVFS 483

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KTL+A+AVA+E+G NF+ ++GPE+ SKWVGESEKAVR +F 
Sbjct: 484  DMGIEPPKGILLFGPPGTGKTLLAKAVATESGANFITIRGPEVLSKWVGESEKAVRKIFE 543

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP+++FFDEID +A  RG +SD   V+DR+++QLL E+DG+    NV VIAATNR
Sbjct: 544  RAREVAPTVVFFDEIDSIAPARGFKSDTSGVTDRIVNQLLTEMDGMIPLSNVVVIAATNR 603

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+YV PP+   R++IF+IHLR++P ++DV+I +LA +++G TGA
Sbjct: 604  PDIIDPALLRPGRFDRLIYVPPPDIESRKQIFKIHLRRVPLANDVSIDKLASITDGYTGA 663

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRL 1035
            DI+ + REA +  + E L+ S +  +H + A++ V PS     I  Y+ +S + +++
Sbjct: 664  DIAAVVREAVMLKLREKLEVSPVEFRHFEMALKKVPPSLSKDVIMMYERISNQLKKI 720



 Score =  245 bits (626), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 120/271 (44%), Positives = 176/271 (64%), Gaps = 20/271 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V WED+G   E K ++ E  E P +H E FKR+G  PP GIL++GPPG  KTL+A+A+A
Sbjct: 176  RVTWEDIGDLEEAKERIREIAELPMRHPEVFKRLGIEPPKGILLYGPPGTGKTLLAKALA 235

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK+ GESE+ +R +F +A+ NAPSIIF DEID +A  R +E  G
Sbjct: 236  NEIGAYFTTINGPEIMSKFYGESEERLREVFKEAQENAPSIIFIDEIDAIAPKR-EEVTG 294

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV++QLL  +DG+ +R  V VI ATNRPD +DPAL RPGRFDR + + PP++  R
Sbjct: 295  -EVEKRVVAQLLTLMDGMQERGRVIVIGATNRPDDLDPALRRPGRFDREIEIRPPDKKAR 353

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE-----NLDASR- 1004
             EI ++H R +P S DV + ++A L+ G TGAD++ + +EAA++++ E      +D S+ 
Sbjct: 354  IEILKVHTRNVPLSKDVQLEKIAELTNGYTGADLAALVKEAAMASLREFMASGKVDLSKN 413

Query: 1005 ------------ITMQHLKTAIRHVQPSEIH 1023
                        ++M+H   A++ ++PS I 
Sbjct: 414  EAIKPDILKNLEVSMKHFTEAMKSIRPSLIR 444



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/213 (47%), Positives = 138/213 (64%), Gaps = 15/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               LG+ P KG+LL+GPPGTGKT LA+  A++ G    T+NGPE++S+ YGESE+ L E
Sbjct: 205 VFKRLGIEPPKGILLYGPPGTGKTLLAKALANEIGAYFTTINGPEIMSKFYGESEERLRE 264

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           VF  A ++AP+++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATN
Sbjct: 265 VFKEAQENAPSIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGMQERGRVIVIGATN 324

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD ++PALRRPGR DREIEI                P    R+EIL      +  S  D
Sbjct: 325 RPDDLDPALRRPGRFDREIEI--------------RPPDKKARIEILKVHTRNVPLS-KD 369

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            ++E ++  T+G+ GADLAAL  EAA+  LR +
Sbjct: 370 VQLEKIAELTNGYTGADLAALVKEAAMASLREF 402



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/214 (43%), Positives = 129/214 (60%), Gaps = 17/214 (7%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
              S +G+ P KG+LL GPPGTGKT LA+  A +SG N  T+ GPEV+S+  GESE+A+ 
Sbjct: 480 KVFSDMGIEPPKGILLFGPPGTGKTLLAKAVATESGANFITIRGPEVLSKWVGESEKAVR 539

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           ++F+ A + AP VVF DE+D+IAPAR  K     ++ R+V  LL  MDG+     V+VIA
Sbjct: 540 KIFERAREVAPTVVFFDEIDSIAPARGFKSDTSGVTDRIVNQLLTEMDGMIPLSNVVVIA 599

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGR DR           L+   P  + S  Q  +I H     + + 
Sbjct: 600 ATNRPDIIDPALLRPGRFDR-----------LIYVPPPDIESRKQIFKI-HLRRVPLAN- 646

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D  ++ L+  T G+ GAD+AA+  EA ++ LR
Sbjct: 647 --DVSIDKLASITDGYTGADIAAVVREAVMLKLR 678


>gi|218883356|ref|YP_002427738.1| Cell division control protein 48, AAA family [Desulfurococcus
            kamchatkensis 1221n]
 gi|218764972|gb|ACL10371.1| Cell division control protein 48, AAA family [Desulfurococcus
            kamchatkensis 1221n]
          Length = 746

 Score =  333 bits (855), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 161/327 (49%), Positives = 224/327 (68%), Gaps = 12/327 (3%)

Query: 724  HNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREV 783
              G+    G    +EK   LK+ + DF  A   V+PS +REV +EVP V W+D+GG  +V
Sbjct: 413  EEGIEIEKGQPIPAEKLEKLKVTMDDFLTAMKNVQPSLIREVFVEVPSVHWDDIGGLEDV 472

Query: 784  KTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGP 843
            K +L EA+EWP K+   F+++G  PP GIL+FGPPG  KTL+A+AVA+E+G NF+ V+GP
Sbjct: 473  KQELREAIEWPMKYPHVFEKMGLEPPKGILLFGPPGTGKTLLAKAVATESGANFITVRGP 532

Query: 844  ELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLV 903
            E+ SKWVGESEKA+R +F +AR  AP+++FFDEID +A IRG  SD   V DR+++QLL 
Sbjct: 533  EVLSKWVGESEKAIRQIFRRARMVAPAVVFFDEIDSIAGIRG--SDPSGVIDRIVNQLLT 590

Query: 904  ELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC 963
            ELDG+     V  IAATNRPD +DPALLRPGRFDRL+YV PP+   R +IF++H+RK+P 
Sbjct: 591  ELDGIQPLRRVVTIAATNRPDLLDPALLRPGRFDRLVYVPPPDYNARLQIFKVHIRKLPL 650

Query: 964  SSDVNIRELACLSEGCTGADISLICREAAISAIEE------NLDASRITMQHLKTAIRHV 1017
            + DV++ ELA  +EG TGADI+ +CREA++ A+ E       LD  ++ M+H   A+  V
Sbjct: 651  AEDVSLDELARRTEGYTGADIAAVCREASLIALRERYRSTGTLDVVKVGMEHFIKALERV 710

Query: 1018 QP----SEIHSYKELSAKFQRLVHSNA 1040
             P    S+I  Y+ L+ + +R+  S +
Sbjct: 711  PPSLSKSDIEMYERLAKELKRVSGSGS 737



 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 129/285 (45%), Positives = 185/285 (64%), Gaps = 23/285 (8%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VRP  + E I   PKV WED+G   EVK ++ E VE P K+ E F+ +G  PP GIL++G
Sbjct: 173  VRPEVLGEGI---PKVTWEDIGDLDEVKQKIREIVELPLKYPELFEHLGIEPPKGILLYG 229

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+A+A+A+E G  F+ + GPE+ SK+ GESE+ +R +F +A+ANAP++IF DE
Sbjct: 230  PPGTGKTLLAKALANEIGAYFVTINGPEIMSKFYGESEERLRKIFEEAQANAPAVIFIDE 289

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRF
Sbjct: 290  IDSIAPKR-EEVTG-EVEKRVVAQLLTLMDGLKERGKVIVIGATNRPDALDPALRRPGRF 347

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + + PP++  R EI  +H R +P + DV++ ++A ++ G TGADI+ + +EAA++A+
Sbjct: 348  DREIEIPPPDKRARREILAVHTRNMPLAEDVDLDKIADMTHGYTGADIAALVKEAAMNAL 407

Query: 997  E------------------ENLDASRITMQHLKTAIRHVQPSEIH 1023
                               E L+  ++TM    TA+++VQPS I 
Sbjct: 408  RRFMKEEGIEIEKGQPIPAEKLEKLKVTMDDFLTAMKNVQPSLIR 452



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 102/214 (47%), Positives = 140/214 (65%), Gaps = 15/214 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LA+  A++ G    T+NGPE++S+ YGESE+ L ++
Sbjct: 214 FEHLGIEPPKGILLYGPPGTGKTLLAKALANEIGAYFVTINGPEIMSKFYGESEERLRKI 273

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A  +APAV+FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 274 FEEAQANAPAVIFIDEIDSIAPKREEVTGEVEKRVVAQLLTLMDGLKERGKVIVIGATNR 333

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREIEI                P    R EIL      M  +  D 
Sbjct: 334 PDALDPALRRPGRFDREIEI--------------PPPDKRARREILAVHTRNMPLA-EDV 378

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +++ ++  THG+ GAD+AAL  EAA+  LRR+ K
Sbjct: 379 DLDKIADMTHGYTGADIAALVKEAAMNALRRFMK 412



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 99/232 (42%), Positives = 131/232 (56%), Gaps = 30/232 (12%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               +GL P KG+LL GPPGTGKT LA+  A +SG N  TV GPEV+S+  GESE+A+ +
Sbjct: 489 VFEKMGLEPPKGILLFGPPGTGKTLLAKAVATESGANFITVRGPEVLSKWVGESEKAIRQ 548

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F  A   APAVVF DE+D+IA  R      +  R+V  LL  +DG+     V+ IAATN
Sbjct: 549 IFRRARMVAPAVVFFDEIDSIAGIRGSDPSGVIDRIVNQLLTELDGIQPLRRVVTIAATN 608

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSL 612
           RPD ++PAL RPGR DR +                 VP P    RL+I    +  +  + 
Sbjct: 609 RPDLLDPALLRPGRFDRLV----------------YVPPPDYNARLQIFKVHIRKLPLA- 651

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR-RYSKIQTSSDVLHSTGTL 663
            D  ++ L+  T G+ GAD+AA+C EA+L+ LR RY           STGTL
Sbjct: 652 EDVSLDELARRTEGYTGADIAAVCREASLIALRERY----------RSTGTL 693


>gi|171186425|ref|YP_001795344.1| AAA ATPase [Pyrobaculum neutrophilum V24Sta]
 gi|170935637|gb|ACB40898.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum neutrophilum V24Sta]
          Length = 731

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 164/338 (48%), Positives = 231/338 (68%), Gaps = 4/338 (1%)

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
            ++L     +S +     +G+ D +      E    +K+ + DF  A  ++ PSA+RE+ +
Sbjct: 387  AALAREAAMSALRRAIQSGLIDLNQPTIPPETFEKIKVTMADFVNALREIVPSALREIHI 446

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            EVP+V+WED+GG   VK +L EAVEWP K+ + FK+ G RPP GIL+FGPPG  KTL+A+
Sbjct: 447  EVPRVRWEDIGGLENVKQELREAVEWPLKYPDKFKKFGLRPPKGILLFGPPGTGKTLLAK 506

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+G NF+AV+GPE+FSKWVGESEK VR +F KAR  AP++IF DEID LA  RG  
Sbjct: 507  AVATESGANFIAVRGPEIFSKWVGESEKMVREIFRKARMAAPAVIFIDEIDALATARGFG 566

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             D + VS+RV++QLL E+DG+    NV VIAATNRPD +DPALLRPGRFDR++YV PP+ 
Sbjct: 567  GDSL-VSERVVAQLLAEMDGVKALENVVVIAATNRPDLVDPALLRPGRFDRIIYVPPPDF 625

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITM 1007
              R +I  IH R  P S DV++ ELA  +EG +GAD+ L+ REA   A+ E+++A  ++M
Sbjct: 626  KARLDILLIHTRTTPLSKDVDLEELARRTEGYSGADLELLVREATFLALREDINAREVSM 685

Query: 1008 QHLKTAIRHVQPS---EIHSYKELSAKFQRLVHSNAEA 1042
            +H + A++ V+PS   ++  + E   +  R +H  A+A
Sbjct: 686  RHFEEALKKVRPSIALDMLKFYETWLEKARQLHVAAKA 723



 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 175/277 (63%), Gaps = 22/277 (7%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            + +P V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ GPPG  KTL+A
Sbjct: 171  VRIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLA 230

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 231  KAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKR-E 289

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRFDR +++ PP+
Sbjct: 290  EVTG-EVEKRVVAQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREIWINPPD 348

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
               R EI  IH R +P + DV++R+LA  + G +GAD++ + REAA+SA+          
Sbjct: 349  FKGRYEILLIHTRNMPLAPDVDLRKLAETTHGFSGADLAALAREAAMSALRRAIQSGLID 408

Query: 998  --------ENLDASRITMQHLKTAIRHVQPS---EIH 1023
                    E  +  ++TM     A+R + PS   EIH
Sbjct: 409  LNQPTIPPETFEKIKVTMADFVNALREIVPSALREIH 445



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/253 (44%), Positives = 150/253 (59%), Gaps = 18/253 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 205 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 264

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 265 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVVVIGATNR 324

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREI I+               P    R EIL      M  +  D 
Sbjct: 325 PDAVDPALRRPGRFDREIWINP--------------PDFKGRYEILLIHTRNMPLA-PDV 369

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTS-SDVLHSTGTLFEFEGHSDTML 674
           ++  L+  THGF GADLAAL  EAA+  LRR   IQ+   D+   T     FE    TM 
Sbjct: 370 DLRKLAETTHGFSGADLAALAREAAMSALRR--AIQSGLIDLNQPTIPPETFEKIKVTMA 427

Query: 675 QDSDCSRNITESS 687
              +  R I  S+
Sbjct: 428 DFVNALREIVPSA 440



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/215 (47%), Positives = 129/215 (60%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               GLRP KG+LL GPPGTGKT LA+  A +SG N   V GPE+ S+  GESE+ + E+
Sbjct: 480 FKKFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREI 539

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEEL-SQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +APAV+FIDE+DA+A AR  GG+ L S+R+VA LL  MDGV   + V+VIAATN
Sbjct: 540 FRKARMAAPAVIFIDEIDALATARGFGGDSLVSERVVAQLLAEMDGVKALENVVVIAATN 599

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEIL--HALLSGMEH 610
           RPD ++PAL RPGR DR I                 VP P    RL+IL  H   + +  
Sbjct: 600 RPDLVDPALLRPGRFDRII----------------YVPPPDFKARLDILLIHTRTTPLSK 643

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D ++E L+  T G+ GADL  L  EA  + LR
Sbjct: 644 ---DVDLEELARRTEGYSGADLELLVREATFLALR 675


>gi|390937891|ref|YP_006401629.1| AAA ATPase [Desulfurococcus fermentans DSM 16532]
 gi|390190998|gb|AFL66054.1| AAA family ATPase, CDC48 subfamily [Desulfurococcus fermentans DSM
            16532]
          Length = 746

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 161/327 (49%), Positives = 222/327 (67%), Gaps = 12/327 (3%)

Query: 724  HNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREV 783
              G+    G    +EK   LK+ + DF  A   V+PS +REV +EVP V W+D+GG  +V
Sbjct: 413  EEGIEIEKGQPIPAEKLEKLKVTMDDFLTAMKNVQPSLIREVFVEVPSVHWDDIGGLEDV 472

Query: 784  KTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGP 843
            K +L EA+EWP K+   F+++G  PP GIL+FGPPG  KTL+A+AVA+E+G NF+ V+GP
Sbjct: 473  KQELREAIEWPMKYPHVFEKMGLEPPKGILLFGPPGTGKTLLAKAVATESGANFITVRGP 532

Query: 844  ELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLV 903
            E+ SKWVGESEKA+R +F +AR  AP+++FFDEID +A +RG  SD   V DR+++QLL 
Sbjct: 533  EVLSKWVGESEKAIRQIFRRARMVAPAVVFFDEIDSIAGVRG--SDPSGVIDRIVNQLLT 590

Query: 904  ELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC 963
            ELDG+     V  IAATNRPD +DPALLRPGRFDRL+YV PP+   R +IF++H RK+P 
Sbjct: 591  ELDGIQPLRRVVTIAATNRPDLLDPALLRPGRFDRLVYVPPPDYNARLQIFKVHTRKLPL 650

Query: 964  SSDVNIRELACLSEGCTGADISLICREAAISAIEE------NLDASRITMQHLKTAIRHV 1017
            + DVN+ ELA  +EG TGADI+ +CREA++ A+ E       LD  ++ M+H   A+  V
Sbjct: 651  AEDVNLDELARRTEGYTGADIAAVCREASLIALRERYRSTGTLDVVKVGMEHFIKALEKV 710

Query: 1018 QP----SEIHSYKELSAKFQRLVHSNA 1040
             P    S I  Y+ L+ + +R+  S +
Sbjct: 711  PPLLSKSNIEMYERLAKELKRVSGSGS 737



 Score =  252 bits (644), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 130/285 (45%), Positives = 184/285 (64%), Gaps = 23/285 (8%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VRP  + E I   PKV WED+G   EVK ++ E VE P K+ E F+ +G  PP GIL++G
Sbjct: 173  VRPEVLGEGI---PKVTWEDIGDLEEVKQKIREIVELPLKYPELFEHLGIEPPKGILLYG 229

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+A+A+A+E G  F+ + GPE+ SK+ GESE+ +R +F +A+ANAP++IF DE
Sbjct: 230  PPGTGKTLLAKALANEIGAYFVTINGPEIMSKFYGESEERLRKIFEEAQANAPAVIFIDE 289

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRF
Sbjct: 290  IDSIAPKR-EEVTG-EVEKRVVAQLLTLMDGLKERGKVIVIGATNRPDALDPALRRPGRF 347

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + + PP++  R EI  +H R +P + DV++ ++A  + G TGADI+ + +EAAI+A+
Sbjct: 348  DREIEIPPPDKRARREILAVHTRNMPLAEDVDLDKIADTTHGYTGADIAALVKEAAINAL 407

Query: 997  E------------------ENLDASRITMQHLKTAIRHVQPSEIH 1023
                               E L+  ++TM    TA+++VQPS I 
Sbjct: 408  RRFMKEEGIEIEKGQPIPAEKLEKLKVTMDDFLTAMKNVQPSLIR 452



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 102/214 (47%), Positives = 140/214 (65%), Gaps = 15/214 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LA+  A++ G    T+NGPE++S+ YGESE+ L ++
Sbjct: 214 FEHLGIEPPKGILLYGPPGTGKTLLAKALANEIGAYFVTINGPEIMSKFYGESEERLRKI 273

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A  +APAV+FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 274 FEEAQANAPAVIFIDEIDSIAPKREEVTGEVEKRVVAQLLTLMDGLKERGKVIVIGATNR 333

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREIEI                P    R EIL      M  +  D 
Sbjct: 334 PDALDPALRRPGRFDREIEI--------------PPPDKRARREILAVHTRNMPLA-EDV 378

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +++ ++  THG+ GAD+AAL  EAA+  LRR+ K
Sbjct: 379 DLDKIADTTHGYTGADIAALVKEAAINALRRFMK 412



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/232 (42%), Positives = 130/232 (56%), Gaps = 30/232 (12%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               +GL P KG+LL GPPGTGKT LA+  A +SG N  TV GPEV+S+  GESE+A+ +
Sbjct: 489 VFEKMGLEPPKGILLFGPPGTGKTLLAKAVATESGANFITVRGPEVLSKWVGESEKAIRQ 548

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F  A   APAVVF DE+D+IA  R      +  R+V  LL  +DG+     V+ IAATN
Sbjct: 549 IFRRARMVAPAVVFFDEIDSIAGVRGSDPSGVIDRIVNQLLTELDGIQPLRRVVTIAATN 608

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSL 612
           RPD ++PAL RPGR DR +                 VP P    RL+I       +  + 
Sbjct: 609 RPDLLDPALLRPGRFDRLV----------------YVPPPDYNARLQIFKVHTRKLPLA- 651

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR-RYSKIQTSSDVLHSTGTL 663
            D  ++ L+  T G+ GAD+AA+C EA+L+ LR RY           STGTL
Sbjct: 652 EDVNLDELARRTEGYTGADIAAVCREASLIALRERY----------RSTGTL 693


>gi|326437583|gb|EGD83153.1| ATPase AFG2 protein [Salpingoeca sp. ATCC 50818]
          Length = 852

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 155/255 (60%), Positives = 199/255 (78%), Gaps = 1/255 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           L L   D      + RPSAMREV+++VP+V W D+GG  ++K  L EAVEWP K+ +AF 
Sbjct: 546 LTLRPEDLRFGLSQTRPSAMREVVVDVPRVTWADIGGNDDIKQCLKEAVEWPLKYSDAFV 605

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           R+G RPP+GILM+GPPGCSKTLMA+A+A+E+ +NF+AVKGPELFSKWVGESE+AVR +F 
Sbjct: 606 RLGIRPPSGILMYGPPGCSKTLMAKALANESHINFIAVKGPELFSKWVGESERAVREVFR 665

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           KARA APSIIFFDEID L A RG    G SV+DRV++QLLVE+DG+ +  NVTV+AATNR
Sbjct: 666 KARAAAPSIIFFDEIDALGARRG-SGQGSSVADRVLTQLLVEMDGVDELRNVTVVAATNR 724

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +D ALLRPGRFDR +YVGPP    R EI R+HL ++P +SDV++ +LA   +G +GA
Sbjct: 725 PDMVDAALLRPGRFDRKVYVGPPTARARAEILRMHLSRVPHASDVDVHDLAAQCDGFSGA 784

Query: 983 DISLICREAAISAIE 997
           +++ ICREAA+  +E
Sbjct: 785 EVASICREAALLHVE 799



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 106/263 (40%), Positives = 165/263 (62%), Gaps = 22/263 (8%)

Query: 400 QNVQATVEQDIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           Q V A+   D+S   +GGL+ +   ++D + ++       +  GL P +GVLL GPPGTG
Sbjct: 280 QRVHASASADVSYADVGGLAHQLQEVRDTVELALQNPQIFTQYGLAPPRGVLLVGPPGTG 339

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT +AR  A + G ++  +NGPE++S+ YGE+E++L  +F  A+ S   ++F+DE+DA+ 
Sbjct: 340 KTLIARAVARECGADVTVINGPEIISRTYGETERSLKAIFAKAAPSGRHLIFVDEIDAMC 399

Query: 517 PARKDGGEELSQRMVATLLNLMDGVC--RTDG---VLVIAATNRPDSIEPALRRPGRLDR 571
           PAR     +L +R+V T+L LMDG+    +DG   V+V+AATNRPD+++PALRRPGR DR
Sbjct: 400 PARDAATSDLEKRIVTTMLTLMDGIAAKHSDGEGRVVVLAATNRPDALDPALRRPGRFDR 459

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
           E+++               VP+  QR +IL  LL    H+  D +++ ++   HG+VGAD
Sbjct: 460 EVDV--------------GVPNAMQRRQILRVLLRRFNHTCTDEDIDDVADRAHGYVGAD 505

Query: 632 LAALCNEAALVCLRRYSKIQTSS 654
           LAA+C EA L  +RR ++  +S+
Sbjct: 506 LAAVCREAGLSIVRRAARTHSSN 528



 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 90/233 (38%), Positives = 142/233 (60%), Gaps = 8/233 (3%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V + DVGG      ++ + VE   ++ + F + G  PP G+L+ GPPG  KTL+ARAVA 
Sbjct: 290 VSYADVGGLAHQLQEVRDTVELALQNPQIFTQYGLAPPRGVLLVGPPGTGKTLIARAVAR 349

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           E G +   + GPE+ S+  GE+E++++++FAKA  +   +IF DEID +   R   +   
Sbjct: 350 ECGADVTVINGPEIISRTYGETERSLKAIFAKAAPSGRHLIFVDEIDAMCPARDAATS-- 407

Query: 892 SVSDRVMSQLLVELDGLHQRVN-----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            +  R+++ +L  +DG+  + +     V V+AATNRPD +DPAL RPGRFDR + VG PN
Sbjct: 408 DLEKRIVTTMLTLMDGIAAKHSDGEGRVVVLAATNRPDALDPALRRPGRFDREVDVGVPN 467

Query: 947 ETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEE 998
              R +I R+ LR+   + +D +I ++A  + G  GAD++ +CREA +S +  
Sbjct: 468 AMQRRQILRVLLRRFNHTCTDEDIDDVADRAHGYVGADLAAVCREAGLSIVRR 520



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 132/228 (57%), Gaps = 22/228 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+RP  G+L++GPPG  KT +A+  A++S +N   V GPE+ S+  GESE+A+ EVF  
Sbjct: 607 LGIRPPSGILMYGPPGCSKTLMAKALANESHINFIAVKGPELFSKWVGESERAVREVFRK 666

Query: 499 ASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
           A  +AP+++F DE+DA+   R  G G  ++ R++  LL  MDGV     V V+AATNRPD
Sbjct: 667 ARAAAPSIIFFDEIDALGARRGSGQGSSVADRVLTQLLVEMDGVDELRNVTVVAATNRPD 726

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            ++ AL RPGR DR++ +                P+   R EIL   LS + H+  D +V
Sbjct: 727 MVDAALLRPGRFDRKVYV--------------GPPTARARAEILRMHLSRVPHA-SDVDV 771

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFE 665
             L+    GF GA++A++C EAAL+       ++ SS + H    L E
Sbjct: 772 HDLAAQCDGFSGAEVASICREAALL------HVEASSALAHQRTRLGE 813


>gi|325184327|emb|CCA18818.1| ATPase AFG2 protein putative [Albugo laibachii Nc14]
          Length = 814

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 154/292 (52%), Positives = 206/292 (70%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
             ++ L D + A  K RPSA++E+I++VPKV W ++GGQ  +K QL E VEWP  H EAF 
Sbjct: 522  FRVSLSDMQAALQKTRPSALQEIIVDVPKVYWHEIGGQETIKQQLKEVVEWPLTHPEAFT 581

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G RPP G+L++GPPGCSKT+ A+A+A+E+ +NFLAVKGPELFSKWVGESEKA++SLF 
Sbjct: 582  RMGIRPPKGVLLYGPPGCSKTMTAKALATESCMNFLAVKGPELFSKWVGESEKAIQSLFK 641

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDE D +AA R  +  G  VS RV+SQLL ELDG+     V ++AATNR
Sbjct: 642  KARAASPSIIFFDEFDAIAAQRSSQETGSQVSSRVISQLLTELDGIEPLQQVVIVAATNR 701

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID AL+RPGR DR+LYVGPP    RE I  IH + +P   DV+  +LA  +   +GA
Sbjct: 702  PDLIDKALMRPGRIDRVLYVGPPGIQARESILSIHSQCMPIDPDVDFMQLAVKTTNFSGA 761

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            +++ +CREAA++A+ EN +A  + M+H   A+  ++P       E    F+R
Sbjct: 762  ELAALCREAAMTALMENRNAKHVEMRHFDMALVKIEPQINDDMLEFFDSFKR 813



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/304 (37%), Positives = 174/304 (57%), Gaps = 39/304 (12%)

Query: 350 RSQPQVTESMDHESNA----FVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQAT 405
           R Q   T+S D    A    F I+ +TK+ ++     + +S++  T              
Sbjct: 230 RVQSIATDSNDASQTASHEIFKIDKKTKISIFFKEEHLVESVKRSTF------------- 276

Query: 406 VEQDISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
                +++GGL +E   ++ ++ SS  +       GL P KG+LL GPPGTGK+ LA+  
Sbjct: 277 -----AEIGGLEEEIRTIRQVMESSLYQPQFFMDHGLPPPKGILLFGPPGTGKSMLAKAV 331

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE 524
           A +   + +T+NGPE+++   GE+E  +  +F  A Q++P+++FIDE+D + P R D   
Sbjct: 332 ASEFKASFYTINGPELITDMIGENEARVRAIFKLALQNSPSIIFIDEIDVLCPKRHDRSS 391

Query: 525 ELSQRMVATLLNLMDGVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
           +L +R+VAT L  MDG+   +   V+++AATNRP++++PALRR GRLDREIEI       
Sbjct: 392 DLERRLVATFLIAMDGMNSKEHSQVMILAATNRPNALDPALRRSGRLDREIEI------- 444

Query: 583 LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV 642
                   VP+  +RLEIL  LLS + HSL   +V  LS   HG+VGADL+A+C EA+L 
Sbjct: 445 -------PVPNALKRLEILEMLLSSIPHSLTSDQVYQLSSQAHGYVGADLSAVCKEASLS 497

Query: 643 CLRR 646
             RR
Sbjct: 498 AFRR 501



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 152/274 (55%), Gaps = 21/274 (7%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            V +  + ++GG  E    + + +E      + F   G  PP GIL+FGPPG  K+++A+A
Sbjct: 271  VKRSTFAEIGGLEEEIRTIRQVMESSLYQPQFFMDHGLPPPKGILLFGPPGTGKSMLAKA 330

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VASE   +F  + GPEL +  +GE+E  VR++F  A  N+PSIIF DEID L   R   S
Sbjct: 331  VASEFKASFYTINGPELITDMIGENEARVRAIFKLALQNSPSIIFIDEIDVLCPKRHDRS 390

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVN--VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
                +  R+++  L+ +DG++ + +  V ++AATNRP+ +DPAL R GR DR + +  PN
Sbjct: 391  S--DLERRLVATFLIAMDGMNSKEHSQVMILAATNRPNALDPALRRSGRLDREIEIPVPN 448

Query: 947  ETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEE------- 998
               R EI  + L  IP S +   + +L+  + G  GAD+S +C+EA++SA          
Sbjct: 449  ALKRLEILEMLLSSIPHSLTSDQVYQLSSQAHGYVGADLSAVCKEASLSAFRRACTTTGK 508

Query: 999  ---------NLDASRITMQHLKTAIRHVQPSEIH 1023
                     ++   R+++  ++ A++  +PS + 
Sbjct: 509  SVWLASLSFSIKGFRVSLSDMQAALQKTRPSALQ 542



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 126/213 (59%), Gaps = 21/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +G+RP KGVLL+GPPG  KT  A+  A +S +N   V GPE+ S+  GESE+A+  +
Sbjct: 580 FTRMGIRPPKGVLLYGPPGCSKTMTAKALATESCMNFLAVKGPELFSKWVGESEKAIQSL 639

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A  ++P+++F DE DAIA  R  ++ G ++S R+++ LL  +DG+     V+++AAT
Sbjct: 640 FKKARAASPSIIFFDEFDAIAAQRSSQETGSQVSSRVISQLLTELDGIEPLQQVVIVAAT 699

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+ AL RPGR+DR           +L   P  + +    L I    +       +
Sbjct: 700 NRPDLIDKALMRPGRIDR-----------VLYVGPPGIQARESILSIHSQCMP------I 742

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCL 644
           D +V+++ +A  T  F GA+LAALC EAA+  L
Sbjct: 743 DPDVDFMQLAVKTTNFSGAELAALCREAAMTAL 775


>gi|449681241|ref|XP_002166795.2| PREDICTED: spermatogenesis-associated protein 5-like [Hydra
            magnipapillata]
          Length = 817

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 155/276 (56%), Positives = 201/276 (72%), Gaps = 1/276 (0%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L L DF+ A  K+ PSAM+ + ++VPKV W DVGGQ EVK +L EA+EWP  H E FKR+
Sbjct: 523  LSLNDFKVALSKIGPSAMKALTVDVPKVYWTDVGGQSEVKQKLREAIEWPLNHPEVFKRL 582

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G  PP G+LM+GPPGCSKTLMA+A+A+E+GLNF+++KGPELF+K++GESEKAVR +F KA
Sbjct: 583  GISPPRGLLMYGPPGCSKTLMAKALATESGLNFISIKGPELFNKYLGESEKAVREVFRKA 642

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R  APSIIFFDEID L+  R   S+ V V DRV++Q+L ELDG+     V ++AATNRPD
Sbjct: 643  RNAAPSIIFFDEIDALSIQRSSNSNSV-VGDRVLAQILTELDGVESLDGVVIVAATNRPD 701

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
             IDPALLRPGR DRL+YV  PN   R EI  I  R IP ++DV+I  L  LS G +GA+I
Sbjct: 702  VIDPALLRPGRIDRLIYVPLPNSESRREILSIQFRSIPVANDVDINVLVELSSGYSGAEI 761

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
              ICREAA+  + E+ D  +++ +H  T    ++P+
Sbjct: 762  CSICREAAMFGLREDFDCVKVSQRHFLTMFNQIKPA 797



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 143/239 (59%), Gaps = 16/239 (6%)

Query: 410 ISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHD- 467
           +S +GG+  +  +L++++      S L    G+  T G++ +GP GTGKT LA    ++ 
Sbjct: 281 LSDMGGVDVQVKLLEELVQLPFENSLLYKECGINLTHGIIFYGPSGTGKTHLANAFVNEL 340

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
           SGV+L  ++GPE++S+ YGESEQ L ++F SA    P+++ IDE D + P++     E  
Sbjct: 341 SGVSLTKISGPEIISKYYGESEQNLKKIFMSALSQVPSILIIDEFDILCPSQNLSQNESE 400

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+++TLL LMD +   D  +V A TN  + +E +LRRPGR D++IE+            
Sbjct: 401 KRIISTLLTLMDNIPANDLFVVFAITNNLEGVELSLRRPGRFDQDIEV------------ 448

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP+  QR  IL  L++  +H + D  ++ L+  THG+VG+DL ALC EA ++ ++R
Sbjct: 449 --GVPNVQQRFNILKKLIANFKHKMGDKSIQELASLTHGYVGSDLKALCKEAGMISMKR 505



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 127/208 (61%), Gaps = 16/208 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P +G+L++GPPG  KT +A+  A +SG+N  ++ GPE+ ++  GESE+A+ EVF  
Sbjct: 582 LGISPPRGLLMYGPPGCSKTLMAKALATESGLNFISIKGPELFNKYLGESEKAVREVFRK 641

Query: 499 ASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
           A  +AP+++F DE+DA++  R  +    +  R++A +L  +DGV   DGV+++AATNRPD
Sbjct: 642 ARNAAPSIIFFDEIDALSIQRSSNSNSVVGDRVLAQILTELDGVESLDGVVIVAATNRPD 701

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            I+PAL RPGR+DR I + +              P+   R EIL      +  +  D ++
Sbjct: 702 VIDPALLRPGRIDRLIYVPL--------------PNSESRREILSIQFRSIPVA-NDVDI 746

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLR 645
             L   + G+ GA++ ++C EAA+  LR
Sbjct: 747 NVLVELSSGYSGAEICSICREAAMFGLR 774



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 17/266 (6%)

Query: 773  KWEDVGGQREVKTQLMEA-VEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            K  D+GG  +V+ +L+E  V+ P ++   +K  G     GI+ +GP G  KT +A A  +
Sbjct: 280  KLSDMGGV-DVQVKLLEELVQLPFENSLLYKECGINLTHGIIFYGPSGTGKTHLANAFVN 338

Query: 832  E-AGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            E +G++   + GPE+ SK+ GESE+ ++ +F  A +  PSI+  DE D L   +    + 
Sbjct: 339  ELSGVSLTKISGPEIISKYYGESEQNLKKIFMSALSQVPSILIIDEFDILCPSQNLSQN- 397

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
                 R++S LL  +D +       V A TN  + ++ +L RPGRFD+ + VG PN   R
Sbjct: 398  -ESEKRIISTLLTLMDNIPANDLFVVFAITNNLEGVELSLRRPGRFDQDIEVGVPNVQQR 456

Query: 951  EEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR----- 1004
              I +  +        D +I+ELA L+ G  G+D+  +C+EA + +++  L  S+     
Sbjct: 457  FNILKKLIANFKHKMGDKSIQELASLTHGYVGSDLKALCKEAGMISMKRLLLDSKCLPDR 516

Query: 1005 ------ITMQHLKTAIRHVQPSEIHS 1024
                  +++   K A+  + PS + +
Sbjct: 517  NSVNFSLSLNDFKVALSKIGPSAMKA 542


>gi|297526098|ref|YP_003668122.1| AAA family ATPase [Staphylothermus hellenicus DSM 12710]
 gi|297255014|gb|ADI31223.1| AAA family ATPase, CDC48 subfamily [Staphylothermus hellenicus DSM
            12710]
          Length = 738

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 217/292 (74%), Gaps = 1/292 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF  A  ++ PS +RE+ +EVP+V W+D+GG  +VK +L  AVEWP K+ E FK
Sbjct: 431  MEVRMEDFLAAYKEIVPSGLREIYVEVPEVSWDDIGGLNDVKQELRRAVEWPMKYPEVFK 490

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP GIL++GPPG  KTL+A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 491  RLGIKPPRGILLYGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 550

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IFFDEID +A  RG   D   V++R++SQLL E+DG+++  NV VIAATNR
Sbjct: 551  KARLYAPAVIFFDEIDAIAPARGYAFDS-RVTERIVSQLLTEMDGINRLNNVVVIAATNR 609

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFD+L+YV PP+   R EI +IH R +P + DV++ E+A L+EG +GA
Sbjct: 610  PDILDPALLRPGRFDKLIYVPPPDLNGRIEILKIHTRNMPLAKDVDLYEIARLTEGYSGA 669

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            D+  + REAA+ A++EN++ ++I M+H   AI  V+PS      +L  ++ R
Sbjct: 670  DLEALVREAAMRALKENIEINKIYMRHFLEAINEVRPSITQDIVKLYEEWGR 721



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/267 (45%), Positives = 175/267 (65%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP+V +ED+GG + +  ++ E VE P +H E F+R+G  PP GIL++GPPG  KTL+A+A
Sbjct: 184  VPRVTYEDIGGMKHIVQRVRELVELPLRHPELFRRLGIEPPKGILLYGPPGTGKTLLAKA 243

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+EA   F+A+ GPE+ SK+ GESE+ +R +F +A+ NAP+IIF DEID +A  R  E 
Sbjct: 244  VANEAEAYFIAINGPEIISKFYGESEQRLREIFEQAKKNAPAIIFIDEIDAIAPKR-DEV 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL  R +V VIAATNRP+ +DPAL RPGRFDR + V  P++ 
Sbjct: 303  MG-EVERRVVAQLLALMDGLESRGDVIVIAATNRPNALDPALRRPGRFDREIEVPLPDKQ 361

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EI +IH R +P ++DV++ +LA ++ G TGADI+ + +EAA+ A+            
Sbjct: 362  GRLEILQIHTRGMPLANDVDLNKLAEITHGYTGADIAALVKEAALHALRRYMPEIDLESE 421

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E L+   + M+    A + + PS
Sbjct: 422  TIPVEVLEKMEVRMEDFLAAYKEIVPS 448



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/209 (50%), Positives = 141/209 (67%), Gaps = 15/209 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P KG+LL+GPPGTGKT LA+  A+++      +NGPE++S+ YGESEQ L E+F+ 
Sbjct: 219 LGIEPPKGILLYGPPGTGKTLLAKAVANEAEAYFIAINGPEIISKFYGESEQRLREIFEQ 278

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A ++APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNRP++
Sbjct: 279 AKKNAPAIIFIDEIDAIAPKRDEVMGEVERRVVAQLLALMDGLESRGDVIVIAATNRPNA 338

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           ++PALRRPGR DREIE+ +              P    RLEIL     GM  +  D ++ 
Sbjct: 339 LDPALRRPGRFDREIEVPL--------------PDKQGRLEILQIHTRGMPLA-NDVDLN 383

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRRY 647
            L+  THG+ GAD+AAL  EAAL  LRRY
Sbjct: 384 KLAEITHGYTGADIAALVKEAALHALRRY 412



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/215 (44%), Positives = 131/215 (60%), Gaps = 20/215 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                LG++P +G+LL+GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ 
Sbjct: 487 EVFKRLGIKPPRGILLYGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESEKAIR 546

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           E+F  A   APAV+F DE+DAIAPAR    +  +++R+V+ LL  MDG+ R + V+VIAA
Sbjct: 547 EIFRKARLYAPAVIFFDEIDAIAPARGYAFDSRVTERIVSQLLTEMDGINRLNNVVVIAA 606

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGMEH 610
           TNRPD ++PAL RPGR D+ I                 VP P    R+EIL      M  
Sbjct: 607 TNRPDILDPALLRPGRFDKLI----------------YVPPPDLNGRIEILKIHTRNMPL 650

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           +  D ++  ++  T G+ GADL AL  EAA+  L+
Sbjct: 651 A-KDVDLYEIARLTEGYSGADLEALVREAAMRALK 684


>gi|145592539|ref|YP_001154541.1| ATPase AAA [Pyrobaculum arsenaticum DSM 13514]
 gi|145284307|gb|ABP51889.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum arsenaticum DSM
            13514]
          Length = 731

 Score =  332 bits (852), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 154/278 (55%), Positives = 207/278 (74%), Gaps = 1/278 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + DF  A  ++ PSA+RE+ +EVP+V+WEDVGG   VK +L EAVEWP K+ E FK
Sbjct: 422  IKVTMADFTSALREIVPSALREIHIEVPRVRWEDVGGLENVKQELREAVEWPLKYPEKFK 481

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            + G RPP GIL+FGPPG  KTL+A+AVA+E+G NF+AV+GPE+FSKWVGESEK VR +F 
Sbjct: 482  KFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREIFR 541

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+++F DEID LA  RG   D + VS+RV++QLL E+DG+    NV VIAATNR
Sbjct: 542  KARMAAPAVVFIDEIDALATARGFGGDSL-VSERVVAQLLAEMDGIKALENVVVIAATNR 600

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R +I  IH R  P + DV + ELA  +EG +GA
Sbjct: 601  PDLVDPALLRPGRFDRIIYVPPPDYKARLDILLIHTRATPLAKDVGLEELARRTEGYSGA 660

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            D+ L+ REA   A+ E+++A  ++M+H + A++ V+PS
Sbjct: 661  DLELLVREATFLALREDINAKEVSMRHFEEALKKVRPS 698



 Score =  252 bits (643), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 179/277 (64%), Gaps = 22/277 (7%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            +++P V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ GPPG  KTL+A
Sbjct: 171  VKIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLA 230

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 231  KAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKR-E 289

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRFDR +++ PP+
Sbjct: 290  EVTG-EVEKRVVAQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREIWINPPD 348

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
               R EI +IH R +P + DV++R+LA ++ G +GAD++ + REAA+SA+          
Sbjct: 349  FKGRYEILQIHTRNMPLAPDVDLRKLAEITHGFSGADLAALAREAAMSALRRAIQSGLID 408

Query: 998  --------ENLDASRITMQHLKTAIRHVQPS---EIH 1023
                    E  +  ++TM    +A+R + PS   EIH
Sbjct: 409  LNQPSIPPEVFEQIKVTMADFTSALREIVPSALREIH 445



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/253 (44%), Positives = 150/253 (59%), Gaps = 18/253 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 205 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 264

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 265 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVVVIGATNR 324

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREI I+               P    R EIL      M  +  D 
Sbjct: 325 PDAVDPALRRPGRFDREIWINP--------------PDFKGRYEILQIHTRNMPLA-PDV 369

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFE-FEGHSDTML 674
           ++  L+  THGF GADLAAL  EAA+  LRR   IQ+    L+      E FE    TM 
Sbjct: 370 DLRKLAEITHGFSGADLAALAREAAMSALRR--AIQSGLIDLNQPSIPPEVFEQIKVTMA 427

Query: 675 QDSDCSRNITESS 687
             +   R I  S+
Sbjct: 428 DFTSALREIVPSA 440



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/215 (47%), Positives = 128/215 (59%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               GLRP KG+LL GPPGTGKT LA+  A +SG N   V GPE+ S+  GESE+ + E+
Sbjct: 480 FKKFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREI 539

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEEL-SQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +APAVVFIDE+DA+A AR  GG+ L S+R+VA LL  MDG+   + V+VIAATN
Sbjct: 540 FRKARMAAPAVVFIDEIDALATARGFGGDSLVSERVVAQLLAEMDGIKALENVVVIAATN 599

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEIL--HALLSGMEH 610
           RPD ++PAL RPGR DR I                 VP P    RL+IL  H   + +  
Sbjct: 600 RPDLVDPALLRPGRFDRII----------------YVPPPDYKARLDILLIHTRATPLAK 643

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D  +E L+  T G+ GADL  L  EA  + LR
Sbjct: 644 ---DVGLEELARRTEGYSGADLELLVREATFLALR 675


>gi|296242922|ref|YP_003650409.1| CDC48 subfamily AAA family ATPase [Thermosphaera aggregans DSM 11486]
 gi|296095506|gb|ADG91457.1| AAA family ATPase, CDC48 subfamily [Thermosphaera aggregans DSM
            11486]
          Length = 744

 Score =  332 bits (852), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 161/313 (51%), Positives = 219/313 (69%), Gaps = 12/313 (3%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            +EK   LK+ + DF  A   V+PS +REV +EVP+V+W D+GG   VK +L EAVEWP K
Sbjct: 424  AEKLSKLKVTMNDFLTAMRNVQPSLIREVFVEVPEVRWTDIGGLETVKQELKEAVEWPMK 483

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            +   F+++G  PP GIL+FGPPG  KTL+A+AVA+E+G NF+ V+GPE+ SKWVGESEKA
Sbjct: 484  YPSVFEKMGIEPPKGILLFGPPGTGKTLLAKAVATESGANFITVRGPEVLSKWVGESEKA 543

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            +R +F +A+  APS++FFDEID +A  RG  SD   V DR+++QLL E+DG+     V V
Sbjct: 544  IRQIFRRAKMVAPSVVFFDEIDSIAGARG--SDPSGVIDRIVNQLLTEMDGIQPLRKVVV 601

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
            IAATNRPD +DPALLRPGRFDRL+YV PP+   R EIF++H R+ P + DVNI ELA  +
Sbjct: 602  IAATNRPDLLDPALLRPGRFDRLVYVPPPDLRARVEIFKVHTRRTPIAEDVNIEELARRT 661

Query: 977  EGCTGADISLICREAAISAIEENL------DASRITMQHLKTAIRHVQPS----EIHSYK 1026
            EG TGADI+ +CREAA+ AI E++         ++ M+H   A++ V PS    +I  Y+
Sbjct: 662  EGYTGADIAAVCREAAMMAIRESIGEGDKPSVKKVEMRHFAEALKKVPPSLSKEDIEMYE 721

Query: 1027 ELSAKFQRLVHSN 1039
             L+ + +R+  S 
Sbjct: 722  RLARELKRVSGSG 734



 Score =  256 bits (654), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 132/283 (46%), Positives = 184/283 (65%), Gaps = 21/283 (7%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VRP A+RE    VP++ WED+G   E K ++ E VE P K+ E F+ +G  PP GIL++G
Sbjct: 173  VRPEAIRE---GVPRITWEDIGDLEEAKQKIREIVELPLKNPELFEHLGIEPPKGILLYG 229

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+A+A+A+E G  F+ + GPE+ SK+ GESE+ +R +F +A ANAPS+IF DE
Sbjct: 230  PPGTGKTLLAKALANEIGAYFITINGPEIMSKFYGESEERLRKIFEEAEANAPSVIFIDE 289

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRF
Sbjct: 290  IDSIAPKR-EEVTG-EVEKRVVAQLLTLMDGLKERGRVIVIGATNRPDALDPALRRPGRF 347

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + + PP++  R EI  +H R +P S DV++ ++A ++ G TGADI+ + +EAAI+A+
Sbjct: 348  DREIEIPPPDKKARREILAVHTRNMPLSEDVDLDKIADVTHGYTGADIAALAKEAAINAL 407

Query: 997  E----------------ENLDASRITMQHLKTAIRHVQPSEIH 1023
                             E L   ++TM    TA+R+VQPS I 
Sbjct: 408  RRFMQEEGIEIGQPIPAEKLSKLKVTMNDFLTAMRNVQPSLIR 450



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 139/212 (65%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LA+  A++ G    T+NGPE++S+ YGESE+ L ++
Sbjct: 214 FEHLGIEPPKGILLYGPPGTGKTLLAKALANEIGAYFITINGPEIMSKFYGESEERLRKI 273

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A  +AP+V+FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 274 FEEAEANAPSVIFIDEIDSIAPKREEVTGEVEKRVVAQLLTLMDGLKERGRVIVIGATNR 333

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREIEI                P    R EIL      M  S  D 
Sbjct: 334 PDALDPALRRPGRFDREIEI--------------PPPDKKARREILAVHTRNMPLS-EDV 378

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +++ ++  THG+ GAD+AAL  EAA+  LRR+
Sbjct: 379 DLDKIADVTHGYTGADIAALAKEAAINALRRF 410



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/261 (39%), Positives = 146/261 (55%), Gaps = 33/261 (12%)

Query: 399 FQNVQATVEQDI---------SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
            +NVQ ++ +++         + +GGL      LK+ +       S    +G+ P KG+L
Sbjct: 441 MRNVQPSLIREVFVEVPEVRWTDIGGLETVKQELKEAVEWPMKYPSVFEKMGIEPPKGIL 500

Query: 449 LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
           L GPPGTGKT LA+  A +SG N  TV GPEV+S+  GESE+A+ ++F  A   AP+VVF
Sbjct: 501 LFGPPGTGKTLLAKAVATESGANFITVRGPEVLSKWVGESEKAIRQIFRRAKMVAPSVVF 560

Query: 509 IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
            DE+D+IA AR      +  R+V  LL  MDG+     V+VIAATNRPD ++PAL RPGR
Sbjct: 561 FDEIDSIAGARGSDPSGVIDRIVNQLLTEMDGIQPLRKVVVIAATNRPDLLDPALLRPGR 620

Query: 569 LDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEI--LHALLSGMEHSLLDSEVEYLSMAT 624
            DR +                 VP P    R+EI  +H   + +     D  +E L+  T
Sbjct: 621 FDRLV----------------YVPPPDLRARVEIFKVHTRRTPIAE---DVNIEELARRT 661

Query: 625 HGFVGADLAALCNEAALVCLR 645
            G+ GAD+AA+C EAA++ +R
Sbjct: 662 EGYTGADIAAVCREAAMMAIR 682


>gi|341892365|gb|EGT48300.1| CBN-MAC-1 protein [Caenorhabditis brenneri]
          Length = 831

 Score =  332 bits (850), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 219/675 (32%), Positives = 353/675 (52%), Gaps = 116/675 (17%)

Query: 413  LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
            +GG  +++  +  + +      T ++LG+ P +G ++HGPPG GKT  A+  A + G+ +
Sbjct: 224  IGGADRQFLEVCRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTLFAQAVAGELGLPM 283

Query: 473  FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVA 532
              +   E+VS   GE+E+ +  +FD+A Q++P ++ +D++DAIAP R+    E+ +R+V+
Sbjct: 284  LQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQREMERRVVS 343

Query: 533  TLLNLMDGVC------------------------------RTDGVLVIAATNRPDSIEPA 562
             L + +D +                                + GVLVI  T+RPD+++  
Sbjct: 344  QLCSSLDELVLPPREKPLKDQLTFGDDGSIAILNEPTSSSLSSGVLVIGTTSRPDAVDGG 403

Query: 563  LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM 622
            LRR GR + EI +               +P    R +IL  +     +   D  ++ ++ 
Sbjct: 404  LRRAGRFENEISL--------------GIPDERAREKILEKICR--VNLADDVTLKQIAK 447

Query: 623  ATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRN 682
             T G+VGADL AL  EAA V + R                +F      DT++  ++  +N
Sbjct: 448  LTPGYVGADLQALIREAAKVAIDR----------------VF------DTIVAKNEGHKN 485

Query: 683  IT-ESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC 741
            +T E  ++ LD                              +  G  D S    +SE   
Sbjct: 486  LTVEQIKEELDRVL--------------------------AWLQGEDDPSA---LSELNG 516

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             L++   DFE+A   ++P+A RE    VP V WEDVG   EV+ QL  ++ +P K  + F
Sbjct: 517  GLRISFEDFERALATIQPAAKREGFATVPDVSWEDVGALVEVRKQLEWSILYPIKRADDF 576

Query: 802  KRIGT-RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
              +G    P GIL+ GPPGC KTL+A+AVA+E G+NF++VKGPEL + +VGESE+AVR++
Sbjct: 577  AALGIDSKPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTV 636

Query: 861  FAKARANAPSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIA 918
            F +AR + P +IFFDEID L   R  G+ S G     R+++QLL E+DG+  R  V +I 
Sbjct: 637  FQRARDSQPCVIFFDEIDALCPKRSLGESSGGA----RLVNQLLTEMDGVEGRKAVFLIG 692

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR--KIP-CSSDVNIRELACL 975
            ATNRPD +D A+LRPGR D++L+V  P+  DR +I R   +  K P  + D++ +E+A L
Sbjct: 693  ATNRPDIVDSAILRPGRLDKILFVDFPSVEDRADILRKSTKNGKRPLLADDIDFQEIAQL 752

Query: 976  SE--GCTGADISLICREAAISA-----IEENLDASRITMQHLKTAIRHVQPSEIHSYKEL 1028
             E  G TGAD++ +  E+++ A     +E ++    + M+H + A   ++PS   + ++ 
Sbjct: 753  PELSGFTGADLAALIHESSLLALQARVLENDMTIKGVGMKHFREAAARIRPSVTEADRKK 812

Query: 1029 SAKFQRLVHSNAEAD 1043
                ++ V+   EAD
Sbjct: 813  YEHMKK-VYGLKEAD 826



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 145/264 (54%), Gaps = 31/264 (11%)

Query: 388 REGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGL--RPTK 445
           REG      + +++V A VE  + K      E++IL  I  +       ++LG+  +P +
Sbjct: 538 REGFATVPDVSWEDVGALVE--VRK----QLEWSILYPIKRADD----FAALGIDSKP-Q 586

Query: 446 GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPA 505
           G+LL GPPG GKT LA+  A+++G+N  +V GPE+++   GESE+A+  VF  A  S P 
Sbjct: 587 GILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPC 646

Query: 506 VVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRR 565
           V+F DE+DA+ P R  G      R+V  LL  MDGV     V +I ATNRPD ++ A+ R
Sbjct: 647 VIFFDEIDALCPKRSLGESSGGARLVNQLLTEMDGVEGRKAVFLIGATNRPDIVDSAILR 706

Query: 566 PGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT- 624
           PGRLD+ + +D               PS   R +IL       +  LL  ++++  +A  
Sbjct: 707 PGRLDKILFVDF--------------PSVEDRADILRKSTKNGKRPLLADDIDFQEIAQL 752

Query: 625 ---HGFVGADLAALCNEAALVCLR 645
               GF GADLAAL +E++L+ L+
Sbjct: 753 PELSGFTGADLAALIHESSLLALQ 776



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 129/262 (49%), Gaps = 38/262 (14%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQ--KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            VK+E +GG      Q +E        K  + F  +G  PP G ++ GPPGC KTL A+AV
Sbjct: 219  VKFEHIGG---ADRQFLEVCRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTLFAQAV 275

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E GL  L +   EL S   GE+E+ +R LF  A+ N+P I+  D+ID +A  R  E+ 
Sbjct: 276  AGELGLPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRR--ETA 333

Query: 890  GVSVSDRVMSQLLVELDGL------------------------------HQRVNVTVIAA 919
               +  RV+SQL   LD L                                   V VI  
Sbjct: 334  QREMERRVVSQLCSSLDELVLPPREKPLKDQLTFGDDGSIAILNEPTSSSLSSGVLVIGT 393

Query: 920  TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 979
            T+RPD +D  L R GRF+  + +G P+E  RE+I    + ++  + DV ++++A L+ G 
Sbjct: 394  TSRPDAVDGGLRRAGRFENEISLGIPDERAREKILE-KICRVNLADDVTLKQIAKLTPGY 452

Query: 980  TGADISLICREAAISAIEENLD 1001
             GAD+  + REAA  AI+   D
Sbjct: 453  VGADLQALIREAAKVAIDRVFD 474


>gi|352681678|ref|YP_004892202.1| AAA family ATPase [Thermoproteus tenax Kra 1]
 gi|350274477|emb|CCC81122.1| AAA family ATPase, possible cell division control protein cdc48
            [Thermoproteus tenax Kra 1]
          Length = 730

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 155/298 (52%), Positives = 214/298 (71%), Gaps = 1/298 (0%)

Query: 723  FHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQRE 782
               G+ D +  +  +E    +K+ + DF  A  ++ PSA+RE+ +EVPKVKW D+GG  E
Sbjct: 401  IQEGLVDLNQPVIPAENLEKIKVTMQDFLDAMREIVPSALREIHIEVPKVKWRDIGGLAE 460

Query: 783  VKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKG 842
            VK +L EAVEWP K+ + FK+ G R P GIL+FGPPG  KTL+A+AVA+E+G NF+AV+G
Sbjct: 461  VKQELREAVEWPLKYPDKFKKFGLRAPKGILLFGPPGTGKTLLAKAVATESGANFIAVRG 520

Query: 843  PELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLL 902
            PE+FSKWVGESEK VR +F KAR  AP ++F DEID LA+ RG  +D   V++RV++Q+L
Sbjct: 521  PEIFSKWVGESEKMVREIFQKARMAAPCVVFIDEIDALASARGLGADSF-VTERVVAQML 579

Query: 903  VELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP 962
             E+DG+    N+ VI ATNRPD +DPALLRPGRFDR++YV PP+   R EIF IH R +P
Sbjct: 580  AEMDGIRTLENIVVIGATNRPDLVDPALLRPGRFDRIIYVPPPDFKARLEIFLIHTRNVP 639

Query: 963  CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
             + DV++ ELA  +EG +GADI L+ REA   A+ E+++A  + M+H ++A+  V+PS
Sbjct: 640  LAKDVDLEELARRTEGYSGADIELVVREATFLALREDINAKEVAMRHFESALAKVKPS 697



 Score =  262 bits (670), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 131/277 (47%), Positives = 181/277 (65%), Gaps = 22/277 (7%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            +++P V WED+G   E K ++ E VE P +H E FK +G  PP GIL+FGPPG  KTL+A
Sbjct: 170  VKIPPVTWEDIGDLEEAKQKIRELVELPLRHPELFKHLGIEPPKGILLFGPPGTGKTLLA 229

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 230  KAVANEANAYFIAINGPEIMSKYYGESEAKLREIFEEAKKNAPAIIFIDEIDAIAPKR-E 288

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  RV++QLL  +DGL +R  + VI ATNRPD +DPAL RPGRFDR +++ PP+
Sbjct: 289  EVTG-EVEKRVVAQLLTLMDGLQERGQIVVIGATNRPDAVDPALRRPGRFDREIWINPPD 347

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
               R EI +IH R +P S DV++R+LA ++ G TGADI+ + +EAA+ A+          
Sbjct: 348  IRGRYEILQIHTRNMPLSPDVDLRKLAEMTHGYTGADIAALAKEAAMRALRKAIQEGLVD 407

Query: 998  --------ENLDASRITMQHLKTAIRHVQPS---EIH 1023
                    ENL+  ++TMQ    A+R + PS   EIH
Sbjct: 408  LNQPVIPAENLEKIKVTMQDFLDAMREIVPSALREIH 444



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/211 (46%), Positives = 135/211 (63%), Gaps = 15/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 204 FKHLGIEPPKGILLFGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEAKLREI 263

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     ++VI ATNR
Sbjct: 264 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQIVVIGATNR 323

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREI I+               P    R EIL      M  S  D 
Sbjct: 324 PDAVDPALRRPGRFDREIWIN--------------PPDIRGRYEILQIHTRNMPLS-PDV 368

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++  L+  THG+ GAD+AAL  EAA+  LR+
Sbjct: 369 DLRKLAEMTHGYTGADIAALAKEAAMRALRK 399



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/214 (43%), Positives = 124/214 (57%), Gaps = 22/214 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               GLR  KG+LL GPPGTGKT LA+  A +SG N   V GPE+ S+  GESE+ + E+
Sbjct: 479 FKKFGLRAPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREI 538

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEE-LSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +AP VVFIDE+DA+A AR  G +  +++R+VA +L  MDG+   + ++VI ATN
Sbjct: 539 FQKARMAAPCVVFIDEIDALASARGLGADSFVTERVVAQMLAEMDGIRTLENIVVIGATN 598

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGMEHSL 612
           RPD ++PAL RPGR DR I                 VP P    RLEI   L+      L
Sbjct: 599 RPDLVDPALLRPGRFDRII----------------YVPPPDFKARLEIF--LIHTRNVPL 640

Query: 613 L-DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++E L+  T G+ GAD+  +  EA  + LR
Sbjct: 641 AKDVDLEELARRTEGYSGADIELVVREATFLALR 674


>gi|389860886|ref|YP_006363126.1| AAA ATPase [Thermogladius cellulolyticus 1633]
 gi|388525790|gb|AFK50988.1| AAA family ATPase, CDC48 subfamily [Thermogladius cellulolyticus
            1633]
          Length = 729

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 150/278 (53%), Positives = 208/278 (74%), Gaps = 1/278 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF  A  ++ PS +REV +EVP+VKW D+GG   +K +L  ++EWP K+ E FK
Sbjct: 422  MEVRMEDFMAAYKEIVPSGLREVFVEVPEVKWSDIGGLESIKQELRMSIEWPIKYPETFK 481

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            RIG +PP GIL++GPPG  KTL+A+AVA+E+G NF+A++GPE+ SKWVGESE+A+R +F 
Sbjct: 482  RIGIKPPKGILLYGPPGTGKTLLAKAVATESGANFIAIRGPEVLSKWVGESERAIREVFR 541

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A +RG   D   VS+RV+SQL+ E+DG+ +  NV VIAATNR
Sbjct: 542  KARLYAPAVIFMDEIDAIAPVRGFAYDS-GVSERVVSQLITEMDGIEKLENVVVIAATNR 600

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFD+L+YV PP+ + R EIF+IH R +P + DV++ ELA  +EG +GA
Sbjct: 601  PDILDPALLRPGRFDKLIYVPPPDPSSRLEIFKIHTRNMPLADDVDLYELAKQTEGYSGA 660

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            DI  + REAA+ AI E+L   R+ M+H   A+  V+PS
Sbjct: 661  DIEALVREAALIAIREDLTIDRVYMRHFNEALNKVKPS 698



 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 115/248 (46%), Positives = 170/248 (68%), Gaps = 7/248 (2%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P+V +ED+GG + +  ++ E +E P KH E F+++G  PP GIL++GPPG  KTL+A+A
Sbjct: 175  LPRVTYEDIGGMKHIIQRVRELIELPLKHPELFRKLGIEPPKGILLYGPPGTGKTLLAKA 234

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+EA   F+A+ GPE+ SK+ GESE+ +R +F +A+ NAP+IIF DEID +A  R  + 
Sbjct: 235  VANEADAYFIAINGPEIMSKYYGESEQRLRDIFEQAKKNAPAIIFIDEIDAIAPKR--DE 292

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V  RV++QLL  +DGL  R +V VI ATNRP+ +DPAL RPGRFDR + +  P++ 
Sbjct: 293  VVGEVERRVVAQLLALMDGLEARGDVIVIGATNRPNALDPALRRPGRFDREIEIPMPDKN 352

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDAS 1003
             R EI +IH R +P + DV++ +LA ++ G TGAD++ + REAA+ A+     E NLD+ 
Sbjct: 353  ARLEILQIHTRGVPLAKDVDLNKLAEITHGYTGADLAALVREAALHALRRYLPEINLDSP 412

Query: 1004 RITMQHLK 1011
             I  + L+
Sbjct: 413  SIPFEILE 420



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 140/212 (66%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LA+  A+++      +NGPE++S+ YGESEQ L ++
Sbjct: 207 FRKLGIEPPKGILLYGPPGTGKTLLAKAVANEADAYFIAINGPEIMSKYYGESEQRLRDI 266

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 267 FEQAKKNAPAIIFIDEIDAIAPKRDEVVGEVERRVVAQLLALMDGLEARGDVIVIGATNR 326

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREIEI M              P    RLEIL     G+  +  D 
Sbjct: 327 PNALDPALRRPGRFDREIEIPM--------------PDKNARLEILQIHTRGVPLA-KDV 371

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           ++  L+  THG+ GADLAAL  EAAL  LRRY
Sbjct: 372 DLNKLAEITHGYTGADLAALVREAALHALRRY 403



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 134/214 (62%), Gaps = 20/214 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T   +G++P KG+LL+GPPGTGKT LA+  A +SG N   + GPEV+S+  GESE+A+ E
Sbjct: 479 TFKRIGIKPPKGILLYGPPGTGKTLLAKAVATESGANFIAIRGPEVLSKWVGESERAIRE 538

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           VF  A   APAV+F+DE+DAIAP R    D G  +S+R+V+ L+  MDG+ + + V+VIA
Sbjct: 539 VFRKARLYAPAVIFMDEIDAIAPVRGFAYDSG--VSERVVSQLITEMDGIEKLENVVVIA 596

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD ++PAL RPGR D+ I +                P P+ RLEI       M  +
Sbjct: 597 ATNRPDILDPALLRPGRFDKLIYV--------------PPPDPSSRLEIFKIHTRNMPLA 642

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T G+ GAD+ AL  EAAL+ +R
Sbjct: 643 -DDVDLYELAKQTEGYSGADIEALVREAALIAIR 675


>gi|239609093|gb|EEQ86080.1| AAA family ATPase [Ajellomyces dermatitidis ER-3]
 gi|327356419|gb|EGE85276.1| cell division cycle protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 752

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 216/586 (36%), Positives = 314/586 (53%), Gaps = 88/586 (15%)

Query: 442  RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
            R + G+L++GP GTGK++L           + TVN   V+++N G+ E  L ++F  A Q
Sbjct: 238  RSSGGILIYGPKGTGKSTLLSKLGAAGWKKVLTVNS-SVLNRNRGDGEVLLRKIFTEALQ 296

Query: 502  SAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
            S P+++ ID+LD +AP  +     +   +   L +L D       VLV A T  P+ ++ 
Sbjct: 297  SQPSLIAIDQLDFLAPKNRPNDSSVCSALCEALDSLQDA-----KVLVAACTRHPNDVDD 351

Query: 562  ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
             LR P R   EIE+               VP+   R EIL ++  G      DS++  L+
Sbjct: 352  TLRTPHRFGVEIEL--------------PVPTAKGREEILLSI-RGTSTVPDDSQIAKLA 396

Query: 622  MATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSR 681
              THG+VGADL +L     L C     K QT                            R
Sbjct: 397  ERTHGYVGADLFSLLQ---LSC----RKAQT----------------------------R 421

Query: 682  NITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC 741
             + E     L+ A PC+S+   S    +LP      +  +NF                  
Sbjct: 422  QMME-----LEQAKPCSSEQCAS--EQALPFEAAAPD--ENF------------------ 454

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             L+++  D   A  + RP+AMREV LE PKV+W D+GG  ++K +L +AVE P K  +  
Sbjct: 455  -LQIDDNDISLALQETRPTAMREVFLETPKVRWSDIGGLHDIKERLRKAVERPIKFPDRM 513

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +R+      GIL++GPPGCSKTLM +A+A+EAGLNFLAVKG E+ S +VGESE+A+R +F
Sbjct: 514  RRLNISGKKGILLYGPPGCSKTLMVKALATEAGLNFLAVKGAEILSMYVGESERALREIF 573

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ +PSIIFFDEID +A+ RG    G      V++ LL E+DG+ +  NV V+AATN
Sbjct: 574  RKARSASPSIIFFDEIDAIASRRGSGPSGGGGGINVLTTLLNEMDGIEELKNVLVVAATN 633

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            +P+ +DPAL+RPGR D +LY+GPP+   R+EI  I + K     DV+I  LA ++EG +G
Sbjct: 634  KPEVLDPALMRPGRLDNILYIGPPDLQARKEILNIWVSKSEVDDDVDIDMLAEVTEGYSG 693

Query: 982  ADISLICREAAISAI---EENLDASRITMQHLKTAIRHVQPSEIHS 1024
            A++  IC  AA  A+   EE     +I  +H ++A+  V P +I +
Sbjct: 694  AEMVNICETAADGALDEEEETGQQQKIGWRHFESALEQV-PKQISA 738



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 17/207 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L +   KG+LL+GPPG  KT + +  A ++G+N   V G E++S   GESE+AL E+
Sbjct: 513 MRRLNISGKKGILLYGPPGCSKTLMVKALATEAGLNFLAVKGAEILSMYVGESERALREI 572

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM--VATLLNLMDGVCRTDGVLVIAAT 553
           F  A  ++P+++F DE+DAIA  R  G       +  + TLLN MDG+     VLV+AAT
Sbjct: 573 FRKARSASPSIIFFDEIDAIASRRGSGPSGGGGGINVLTTLLNEMDGIEELKNVLVVAAT 632

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           N+P+ ++PAL RPGRLD           ++L   P   P    R EIL+  +S  E    
Sbjct: 633 NKPEVLDPALMRPGRLD-----------NILYIGP---PDLQARKEILNIWVSKSEVD-D 677

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAA 640
           D +++ L+  T G+ GA++  +C  AA
Sbjct: 678 DVDIDMLAEVTEGYSGAEMVNICETAA 704


>gi|379005482|ref|YP_005261154.1| AAA ATPase [Pyrobaculum oguniense TE7]
 gi|375160935|gb|AFA40547.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum oguniense TE7]
          Length = 731

 Score =  331 bits (848), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 153/278 (55%), Positives = 208/278 (74%), Gaps = 1/278 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + DF  A  ++ PSA+RE+ +EVP+V+WEDVGG   VK +L EAVEWP K+ + FK
Sbjct: 422  IKVTMADFTSALREIVPSALREIHIEVPRVRWEDVGGLENVKQELREAVEWPLKYPDKFK 481

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            + G RPP GIL+FGPPG  KTL+A+AVA+E+G NF+AV+GPE+FSKWVGESEK VR +F 
Sbjct: 482  KFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREIFR 541

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+++F DEID LA  RG   D + VS+RV++QLL E+DG+    NV VIAATNR
Sbjct: 542  KARMAAPAVVFIDEIDALATARGFGGDSL-VSERVVAQLLAEMDGIKALENVVVIAATNR 600

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R +I  IH R  P + DV++ ELA  +EG +GA
Sbjct: 601  PDLVDPALLRPGRFDRIIYVPPPDFKARLDILLIHTRATPLAKDVDLEELARRTEGYSGA 660

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            D+ L+ REA   A+ E+++A  ++M+H + A++ V+PS
Sbjct: 661  DLELLVREATFLALREDINAKEVSMRHFEEALKKVRPS 698



 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 179/277 (64%), Gaps = 22/277 (7%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            +++P V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ GPPG  KTL+A
Sbjct: 171  VKIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLA 230

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 231  KAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKR-E 289

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRFDR +++ PP+
Sbjct: 290  EVTG-EVEKRVVAQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREIWINPPD 348

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
               R EI +IH R +P + DV++R+LA ++ G +GAD++ + REAA+SA+          
Sbjct: 349  FKGRYEILQIHTRNMPLAPDVDLRKLAEITHGFSGADLAALAREAAMSALRRAIQSGLID 408

Query: 998  --------ENLDASRITMQHLKTAIRHVQPS---EIH 1023
                    E  +  ++TM    +A+R + PS   EIH
Sbjct: 409  LNQPSIPPEVFEQIKVTMADFTSALREIVPSALREIH 445



 Score =  196 bits (497), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 113/253 (44%), Positives = 150/253 (59%), Gaps = 18/253 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 205 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 264

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 265 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVVVIGATNR 324

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREI I+               P    R EIL      M  +  D 
Sbjct: 325 PDAVDPALRRPGRFDREIWINP--------------PDFKGRYEILQIHTRNMPLA-PDV 369

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFE-FEGHSDTML 674
           ++  L+  THGF GADLAAL  EAA+  LRR   IQ+    L+      E FE    TM 
Sbjct: 370 DLRKLAEITHGFSGADLAALAREAAMSALRR--AIQSGLIDLNQPSIPPEVFEQIKVTMA 427

Query: 675 QDSDCSRNITESS 687
             +   R I  S+
Sbjct: 428 DFTSALREIVPSA 440



 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/215 (47%), Positives = 129/215 (60%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               GLRP KG+LL GPPGTGKT LA+  A +SG N   V GPE+ S+  GESE+ + E+
Sbjct: 480 FKKFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREI 539

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEEL-SQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +APAVVFIDE+DA+A AR  GG+ L S+R+VA LL  MDG+   + V+VIAATN
Sbjct: 540 FRKARMAAPAVVFIDEIDALATARGFGGDSLVSERVVAQLLAEMDGIKALENVVVIAATN 599

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEIL--HALLSGMEH 610
           RPD ++PAL RPGR DR I                 VP P    RL+IL  H   + +  
Sbjct: 600 RPDLVDPALLRPGRFDRII----------------YVPPPDFKARLDILLIHTRATPLAK 643

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D ++E L+  T G+ GADL  L  EA  + LR
Sbjct: 644 ---DVDLEELARRTEGYSGADLELLVREATFLALR 675


>gi|334330865|ref|XP_003341419.1| PREDICTED: LOW QUALITY PROTEIN: spermatogenesis-associated protein
            5-like [Monodelphis domestica]
          Length = 841

 Score =  331 bits (848), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 154/291 (52%), Positives = 210/291 (72%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            ++ L DF +A   VRPSAMREV ++VP+V W D+GG  +VK +L +AVEWP KH E F R
Sbjct: 545  RMTLSDFLRAMNDVRPSAMREVAIDVPRVSWLDIGGLEDVKLKLKQAVEWPLKHPEVFVR 604

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G RPPTG+L++GPPGCSKT++A+A+ASE+GLNFLAVKGPEL  K+VG+SE+AVR +F K
Sbjct: 605  MGIRPPTGVLLYGPPGCSKTMIAKALASESGLNFLAVKGPELMDKYVGQSERAVREVFRK 664

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            ARA APSI+FFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +V V+AATNRP
Sbjct: 665  ARAVAPSILFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVVVLAATNRP 724

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            DKID AL+RPGRFDR++YV  P+   R EIF++     P   DV++ EL C ++  +GA+
Sbjct: 725  DKIDKALMRPGRFDRIIYVPLPDAATRREIFKLQFSSKPVGLDVDVEELVCRTDTYSGAE 784

Query: 984  ISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            I+ +C EA + A+EE++ A  I  +H   A+  V P    S +   A + +
Sbjct: 785  ITAVCSEAGLLALEEDIQAKFIMRRHFIEALNIVTPRIPESLRHFYADYHK 835



 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/238 (45%), Positives = 148/238 (62%), Gaps = 18/238 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +     +  +  G    +GVLL+GPPGTGKT +AR  A   G  
Sbjct: 304 IGGLGSQLRAIREMIELPLKRPALFTRYGRSCLRGVLLYGPPGTGKTMIARAVAMKXGSP 363

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           L  +NGPEV+S+ YG SE  L ++F  A+   P+++FIDELDA+ P R+    EL++R+V
Sbjct: 364 LSVINGPEVISKFYGASEARLRQIFAEATLRQPSIIFIDELDALCPKREGSESELAKRVV 423

Query: 532 ATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           A+LL LMDG+    ++G VLVI ATNR  S++PALRRPGR D+EIEI             
Sbjct: 424 ASLLTLMDGIGSEGSEGRVLVIGATNRLHSLDPALRRPGRFDKEIEI------------- 470

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             VP+   RL+IL  LL  + H+L   EV  L+ + HG+VGADL ALCNEA L   RR
Sbjct: 471 -GVPNAQDRLDILQKLLRKVPHALRGEEVVRLANSAHGYVGADLKALCNEAGLRAWRR 527



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/271 (36%), Positives = 146/271 (53%), Gaps = 20/271 (7%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V ++ +GG       + E +E P K    F R G     G+L++GPPG  KT++ARAV
Sbjct: 297  PAVTYDLIGGLGSQLRAIREMIELPLKRPALFTRYGRSCLRGVLLYGPPGTGKTMIARAV 356

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKES 888
            A + G     + GPE+ SK+ G SE  +R +FA+A    PSIIF DE+D L   R G ES
Sbjct: 357  AMKXGSPLSVINGPEVISKFYGASEARLRQIFAEATLRQPSIIFIDELDALCPKREGSES 416

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
            +   ++ RV++ LL  +DG+    +   V VI ATNR   +DPAL RPGRFD+ + +G P
Sbjct: 417  E---LAKRVVASLLTLMDGIGSEGSEGRVLVIGATNRLHSLDPALRRPGRFDKEIEIGVP 473

Query: 946  NETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIE------- 997
            N  DR +I +  LRK+P +     +  LA  + G  GAD+  +C EA + A         
Sbjct: 474  NAQDRLDILQKLLRKVPHALRGEEVVRLANSAHGYVGADLKALCNEAGLRAWRRVQSELP 533

Query: 998  -----ENLDASRITMQHLKTAIRHVQPSEIH 1023
                 E  + +R+T+     A+  V+PS + 
Sbjct: 534  DLPEGEAPELARMTLSDFLRAMNDVRPSAMR 564



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 122/208 (58%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+RP  GVLL+GPPG  KT +A+  A +SG+N   V GPE++ +  G+SE+A+ EVF  
Sbjct: 605 MGIRPPTGVLLYGPPGCSKTMIAKALASESGLNFLAVKGPELMDKYVGQSERAVREVFRK 664

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V+V+AATNRP
Sbjct: 665 ARAVAPSILFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVVVLAATNRP 724

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR DR I + +              P  A R EI     S      LD +
Sbjct: 725 DKIDKALMRPGRFDRIIYVPL--------------PDAATRREIFKLQFSSKPVG-LDVD 769

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           VE L   T  + GA++ A+C+EA L+ L
Sbjct: 770 VEELVCRTDTYSGAEITAVCSEAGLLAL 797


>gi|296108730|ref|YP_003615679.1| ATPase AAA [methanocaldococcus infernus ME]
 gi|295433544|gb|ADG12715.1| AAA family ATPase, CDC48 subfamily [Methanocaldococcus infernus ME]
          Length = 903

 Score =  331 bits (848), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 161/302 (53%), Positives = 219/302 (72%), Gaps = 4/302 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF++A   V PSAMREV++EVP VKWED+GG  EVK +L EAVEWP K ++ F 
Sbjct: 420  LKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKDVFD 479

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +IG RPP G+L+FGPPG  KTL+A+AVA+EAG NF++VKGPE+FSKWVGESEKA+R +F 
Sbjct: 480  KIGVRPPKGVLLFGPPGTGKTLLAKAVANEAGANFISVKGPEIFSKWVGESEKAIREIFK 539

Query: 863  KARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            KAR NAP IIFFDEID +A  RG++ S G  V+D+V++Q+L ELDGL +  +V VIAATN
Sbjct: 540  KARQNAPCIIFFDEIDAIAPKRGRDISSG--VTDKVVNQILTELDGLEEPKDVVVIAATN 597

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD IDPALLRPGR DR++ V  P+E  R +IF+IH R +  + DV++ ELA  +EG TG
Sbjct: 598  RPDIIDPALLRPGRLDRIILVPVPDEKARLDIFKIHTRGMSLAEDVDLEELAKKTEGYTG 657

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAE 1041
            ADI  +CREAA+ A+ E +       + L+  I ++Q     +++ L+ +   ++ +  E
Sbjct: 658  ADIEAVCREAAMLAVREGIGEPWDIEKDLRELINYLQAIS-GAFRALAVELNSVIKATKE 716

Query: 1042 AD 1043
             +
Sbjct: 717  KE 718



 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 123/267 (46%), Positives = 176/267 (65%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P V +ED+GG +E   ++ E +E P KH E F+++G  PP G+L+ GPPG  KTL+A+A
Sbjct: 173  IPDVTYEDIGGLKEEVRKVREMIELPMKHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKA 232

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+EAG NF  + GPE+ SK+VGE+E+ +R +F +A  NAPSIIF DEID +A  R  E+
Sbjct: 233  VANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRD-EA 291

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  R+++QLL  +DGL  R  V VI ATNRPD +DPAL RPGRFDR + +G P+  
Sbjct: 292  TG-EVERRLVAQLLTLMDGLKGRGQVVVIGATNRPDALDPALRRPGRFDREIVIGVPDRE 350

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI------------ 996
             R+EI +IH R +P + DV++  LA ++ G  GAD++ +C+EAA+ A+            
Sbjct: 351  GRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPDIDLEAE 410

Query: 997  ---EENLDASRITMQHLKTAIRHVQPS 1020
               +E LD  ++TM   K A++ V+PS
Sbjct: 411  EIPKEVLDNLKVTMDDFKEALKDVEPS 437



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/255 (44%), Positives = 160/255 (62%), Gaps = 19/255 (7%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P  ++E   +     +DI   GGL +E   ++++I +          LG+ P KGVLL G
Sbjct: 164 PTKEVEESRIPDVTYEDI---GGLKEEVRKVREMIELPMKHPELFEKLGIEPPKGVLLVG 220

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A+++G N + +NGPE++S+  GE+E+ L ++F+ A ++AP+++FIDE
Sbjct: 221 PPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDE 280

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNRPD+++PALRRPGR DR
Sbjct: 281 IDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPDALDPALRRPGRFDR 340

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
           EI I               VP    R EIL      M  +  D +++YL+  THGFVGAD
Sbjct: 341 EIVI--------------GVPDREGRKEILQIHTRNMPLA-EDVDLDYLADVTHGFVGAD 385

Query: 632 LAALCNEAALVCLRR 646
           LAALC EAA+  LRR
Sbjct: 386 LAALCKEAAMRALRR 400



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 95/214 (44%), Positives = 133/214 (62%), Gaps = 16/214 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K     +G+RP KGVLL GPPGTGKT LA+  A+++G N  +V GPE+ S+  GESE+A+
Sbjct: 475 KDVFDKIGVRPPKGVLLFGPPGTGKTLLAKAVANEAGANFISVKGPEIFSKWVGESEKAI 534

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            E+F  A Q+AP ++F DE+DAIAP R +D    ++ ++V  +L  +DG+     V+VIA
Sbjct: 535 REIFKKARQNAPCIIFFDEIDAIAPKRGRDISSGVTDKVVNQILTELDGLEEPKDVVVIA 594

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLDR I +               VP    RL+I      GM  +
Sbjct: 595 ATNRPDIIDPALLRPGRLDRIILV--------------PVPDEKARLDIFKIHTRGMSLA 640

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++E L+  T G+ GAD+ A+C EAA++ +R
Sbjct: 641 -EDVDLEELAKKTEGYTGADIEAVCREAAMLAVR 673


>gi|345488604|ref|XP_001602720.2| PREDICTED: spermatogenesis-associated protein 5-like [Nasonia
            vitripennis]
          Length = 783

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 160/292 (54%), Positives = 211/292 (72%), Gaps = 6/292 (2%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A   V PSAM+E++++VP VKW D+GGQ+++K +L ++ EWP KH E F ++G  P
Sbjct: 491  DFNHALAVVNPSAMKELLVDVPNVKWSDIGGQKDLKLKLTQSFEWPLKHPEIFPKLGITP 550

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+LMFGPPGCSKT++A+A+A+E+ LNFL +KGPELFSKWVGESEKAVR LF KA+  A
Sbjct: 551  PKGVLMFGPPGCSKTMIAKALATESKLNFLNIKGPELFSKWVGESEKAVRELFRKAKQVA 610

Query: 869  PSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
            PSIIF DEID L   R     S G SV DRV++QLL ELDG+    +VT++AATNRPD+I
Sbjct: 611  PSIIFIDEIDALGVERSNSSNSGGNSVQDRVLTQLLTELDGVTSLGDVTLVAATNRPDRI 670

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            D ALLRPGRFDRL+YV  P++  R EIF I  RK+P S DVN+ +L  L+EG +GA+I  
Sbjct: 671  DRALLRPGRFDRLIYVPLPDDDTRMEIFNIKTRKMPLSKDVNLNDLVELTEGYSGAEIQA 730

Query: 987  ICREAAISAIEENLDASRITMQHLKTAIRHVQPSE----IHSYKELSAKFQR 1034
            +C EA + A+EE+ +A++IT +H + A+  V+P +    I  Y    AK  R
Sbjct: 731  VCNEAGMRALEEDFNATQITTEHFRIALSIVRPRDHSDLIKIYNNFLAKNSR 782



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 129/240 (53%), Gaps = 20/240 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P KGVL+ GPPG  KT +A+  A +S +N   + GPE+ S+  GESE+A+ E+F  
Sbjct: 546 LGITPPKGVLMFGPPGCSKTMIAKALATESKLNFLNIKGPELFSKWVGESEKAVRELFRK 605

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A Q AP+++FIDE+DA+   R      GG  +  R++  LL  +DGV     V ++AATN
Sbjct: 606 AKQVAPSIIFIDEIDALGVERSNSSNSGGNSVQDRVLTQLLTELDGVTSLGDVTLVAATN 665

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+ AL RPGR DR I + +              P    R+EI +     M  S  D
Sbjct: 666 RPDRIDRALLRPGRFDRLIYVPL--------------PDDDTRMEIFNIKTRKMPLS-KD 710

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDTM 673
             +  L   T G+ GA++ A+CNEA +  L   ++  Q +++      ++     HSD +
Sbjct: 711 VNLNDLVELTEGYSGAEIQAVCNEAGMRALEEDFNATQITTEHFRIALSIVRPRDHSDLI 770



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 126/217 (58%), Gaps = 19/217 (8%)

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
           +KG+LL+G  G GKT ++     +   ++  +N     ++N  E+E  L  +F+ A ++A
Sbjct: 286 SKGILLYGHSGVGKTMISEALLSEIEAHVVNINALVGCNKNLKETELLLKNLFNEALENA 345

Query: 504 PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTD-GVLVIAATNRPDSIEPA 562
           P+V+FID +D + P +     E  ++++ TL+ L+D +  ++  V+V+A T +PD+++ +
Sbjct: 346 PSVIFIDNIDYLCPKKTSSMTE--KQVLTTLVTLIDSLQDSNKNVMVLALTAKPDAVDSS 403

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM 622
           LRRPGR+D+E EI               VP+   R +IL  ++  M HSL D ++E ++ 
Sbjct: 404 LRRPGRIDQEFEI--------------PVPTRQTRKDILLKVIEKMPHSLSDEDIEQIAY 449

Query: 623 ATHGFVGADLAALCNEAALVCLR--RYSKIQTSSDVL 657
            THGFV AD+  LC++A+    R  R S I  S++VL
Sbjct: 450 ETHGFVAADIRGLCSQASRNAKRKSRASSICDSNEVL 486



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 106/187 (56%), Gaps = 6/187 (3%)

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           GIL++G  G  KT+++ A+ SE   + + +      +K + E+E  +++LF +A  NAPS
Sbjct: 288 GILLYGHSGVGKTMISEALLSEIEAHVVNINALVGCNKNLKETELLLKNLFNEALENAPS 347

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ-RVNVTVIAATNRPDKIDPA 929
           +IF D ID L     K++  ++   +V++ L+  +D L     NV V+A T +PD +D +
Sbjct: 348 VIFIDNIDYLCP---KKTSSMT-EKQVLTTLVTLIDSLQDSNKNVMVLALTAKPDAVDSS 403

Query: 930 LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLIC 988
           L RPGR D+   +  P    R++I    + K+P S SD +I ++A  + G   ADI  +C
Sbjct: 404 LRRPGRIDQEFEIPVPTRQTRKDILLKVIEKMPHSLSDEDIEQIAYETHGFVAADIRGLC 463

Query: 989 REAAISA 995
            +A+ +A
Sbjct: 464 SQASRNA 470


>gi|261188119|ref|XP_002620476.1| AAA family ATPase [Ajellomyces dermatitidis SLH14081]
 gi|239593351|gb|EEQ75932.1| AAA family ATPase [Ajellomyces dermatitidis SLH14081]
          Length = 752

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 216/586 (36%), Positives = 314/586 (53%), Gaps = 88/586 (15%)

Query: 442  RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
            R + G+L++GP GTGK++L           + TVN   V+++N G+ E  L ++F  A Q
Sbjct: 238  RSSGGILIYGPKGTGKSTLLSKLGAAGWKKVLTVNS-SVLNRNRGDGEVLLRKIFTEALQ 296

Query: 502  SAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
            S P+++ ID+LD +AP  +     +   +   L +L D       VLV A T  P+ ++ 
Sbjct: 297  SQPSLIAIDQLDFLAPKNRPNDSSVCSALCEALDSLQDA-----KVLVAACTRHPNDVDD 351

Query: 562  ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
             LR P R   EIE+               VP+   R EIL ++  G      DS++  L+
Sbjct: 352  TLRTPHRFGVEIEL--------------PVPTAKGREEILLSI-RGTSTVPDDSQIAKLA 396

Query: 622  MATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSR 681
              THG+VGADL +L     L C     K QT                            R
Sbjct: 397  ERTHGYVGADLFSLLQ---LSC----RKAQT----------------------------R 421

Query: 682  NITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC 741
             + E     L+ A PC+S+   S    +LP      +  +NF                  
Sbjct: 422  QMME-----LEQAKPCSSEQCAS--EQALPFEAAAPD--ENF------------------ 454

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             L+++  D   A  + RP+AMREV LE PKV+W D+GG  ++K +L +AVE P K  +  
Sbjct: 455  -LQIDDNDISLALQETRPTAMREVFLETPKVRWSDIGGLHDIKERLRKAVERPIKFPDRM 513

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +R+      GIL++GPPGCSKTLM +A+A+EAGLNFLAVKG E+ S +VGESE+A+R +F
Sbjct: 514  RRLNISGKKGILLYGPPGCSKTLMVKALATEAGLNFLAVKGAEILSMYVGESERALREIF 573

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ +PSIIFFDEID +A+ RG    G      V++ LL E+DG+ +  NV V+AATN
Sbjct: 574  RKARSASPSIIFFDEIDSIASRRGSGPSGGGGGINVLTTLLNEMDGIEELKNVLVVAATN 633

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            +P+ +DPAL+RPGR D +LY+GPP+   R+EI  I + K     DV+I  LA ++EG +G
Sbjct: 634  KPEVLDPALMRPGRLDNILYIGPPDLQARKEILNIWVSKSEVDDDVDIDMLAEVTEGYSG 693

Query: 982  ADISLICREAAISAI---EENLDASRITMQHLKTAIRHVQPSEIHS 1024
            A++  IC  AA  A+   EE     +I  +H ++A+  V P +I +
Sbjct: 694  AEMVNICETAADGALDEEEETGQQQKIGWRHFESALEQV-PKQISA 738



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 118/207 (57%), Gaps = 17/207 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L +   KG+LL+GPPG  KT + +  A ++G+N   V G E++S   GESE+AL E+
Sbjct: 513 MRRLNISGKKGILLYGPPGCSKTLMVKALATEAGLNFLAVKGAEILSMYVGESERALREI 572

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM--VATLLNLMDGVCRTDGVLVIAAT 553
           F  A  ++P+++F DE+D+IA  R  G       +  + TLLN MDG+     VLV+AAT
Sbjct: 573 FRKARSASPSIIFFDEIDSIASRRGSGPSGGGGGINVLTTLLNEMDGIEELKNVLVVAAT 632

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           N+P+ ++PAL RPGRLD           ++L   P   P    R EIL+  +S  E    
Sbjct: 633 NKPEVLDPALMRPGRLD-----------NILYIGP---PDLQARKEILNIWVSKSEVD-D 677

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAA 640
           D +++ L+  T G+ GA++  +C  AA
Sbjct: 678 DVDIDMLAEVTEGYSGAEMVNICETAA 704


>gi|410956904|ref|XP_003985076.1| PREDICTED: spermatogenesis-associated protein 5 isoform 1 [Felis
            catus]
          Length = 891

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 151/291 (51%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    VRPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 593  VKITLNDFLQGMNDVRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 652

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 653  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 712

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVT++AATNR
Sbjct: 713  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNR 772

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF +    +P  +DV++ EL   ++  +GA
Sbjct: 773  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFNLQFHSMPVGNDVDLAELILQTDTYSGA 832

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +    ++Q
Sbjct: 833  EIIAVCREAALLALEEDIQANHIMRRHFTQALSTVTPRIPKSLRRFYEEYQ 883



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/258 (43%), Positives = 163/258 (63%), Gaps = 20/258 (7%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           E Q+ Q  V  D+  +GGL+ +   +++II +         S G+ P +GVLL+GPPGTG
Sbjct: 340 EEQDNQFKVTYDM--IGGLNSQLKTIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTG 397

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ 
Sbjct: 398 KTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALC 457

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREI 573
           P R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EI
Sbjct: 458 PKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEI 517

Query: 574 EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
           EI               VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL 
Sbjct: 518 EI--------------GVPNAEDRLDILQKLLRTVPHLLTEAELLQLANSAHGYVGADLK 563

Query: 634 ALCNEAALVCLRRYSKIQ 651
           ALCNEA L  LRR  K Q
Sbjct: 564 ALCNEAGLYALRRVLKKQ 581



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/269 (37%), Positives = 149/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 347  KVTYDMIGGLNSQLKTIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 406

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 407  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 464

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 465  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 524

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  LR +P   ++  + +LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 525  EDRLDILQKLLRTVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLKKQPNL 584

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT+      +  V+PS + 
Sbjct: 585  SDSKMAGLVKITLNDFLQGMNDVRPSAMR 613



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E+F  
Sbjct: 654 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRK 713

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 714 ARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRP 773

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI +     M     D +
Sbjct: 774 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFNLQFHSMPVG-NDVD 818

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           +  L + T  + GA++ A+C EAAL+ L
Sbjct: 819 LAELILQTDTYSGAEIIAVCREAALLAL 846


>gi|410956906|ref|XP_003985077.1| PREDICTED: spermatogenesis-associated protein 5 isoform 2 [Felis
            catus]
          Length = 890

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 151/291 (51%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    VRPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 592  VKITLNDFLQGMNDVRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 651

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 652  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 711

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVT++AATNR
Sbjct: 712  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNR 771

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF +    +P  +DV++ EL   ++  +GA
Sbjct: 772  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFNLQFHSMPVGNDVDLAELILQTDTYSGA 831

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +    ++Q
Sbjct: 832  EIIAVCREAALLALEEDIQANHIMRRHFTQALSTVTPRIPKSLRRFYEEYQ 882



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/258 (43%), Positives = 163/258 (63%), Gaps = 20/258 (7%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           E Q+ Q  V  D+  +GGL+ +   +++II +         S G+ P +GVLL+GPPGTG
Sbjct: 339 EEQDNQFKVTYDM--IGGLNSQLKTIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTG 396

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ 
Sbjct: 397 KTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALC 456

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREI 573
           P R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EI
Sbjct: 457 PKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEI 516

Query: 574 EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
           EI               VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL 
Sbjct: 517 EI--------------GVPNAEDRLDILQKLLRTVPHLLTEAELLQLANSAHGYVGADLK 562

Query: 634 ALCNEAALVCLRRYSKIQ 651
           ALCNEA L  LRR  K Q
Sbjct: 563 ALCNEAGLYALRRVLKKQ 580



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/269 (37%), Positives = 149/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 346  KVTYDMIGGLNSQLKTIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 405

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 406  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 463

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 464  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 523

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  LR +P   ++  + +LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 524  EDRLDILQKLLRTVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLKKQPNL 583

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT+      +  V+PS + 
Sbjct: 584  SDSKMAGLVKITLNDFLQGMNDVRPSAMR 612



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E+F  
Sbjct: 653 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRK 712

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 713 ARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRP 772

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI +     M     D +
Sbjct: 773 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFNLQFHSMPVG-NDVD 817

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           +  L + T  + GA++ A+C EAAL+ L
Sbjct: 818 LAELILQTDTYSGAEIIAVCREAALLAL 845


>gi|126465619|ref|YP_001040728.1| ATPase AAA [Staphylothermus marinus F1]
 gi|126014442|gb|ABN69820.1| AAA family ATPase, CDC48 subfamily [Staphylothermus marinus F1]
          Length = 738

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 150/292 (51%), Positives = 217/292 (74%), Gaps = 1/292 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF  A  ++ PS +RE+ +EVP+V W+D+GG  +VK +L  AVEWP K+ E FK
Sbjct: 431  MEVRMEDFLAAYKEIVPSGLREIYVEVPEVSWDDIGGLEDVKQELRRAVEWPMKYPEVFK 490

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP GIL++GPPG  KTL+A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 491  RLGIKPPRGILLYGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 550

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IFFDEID +A  RG   D   V++R++SQLL E+DG+++  NV VIAATNR
Sbjct: 551  KARLYAPAVIFFDEIDAIAPARGYAFDS-RVTERIVSQLLTEMDGINRLDNVVVIAATNR 609

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFD+L+YV PP+   R EI +IH R +P + DV++ E+A L+EG +GA
Sbjct: 610  PDILDPALLRPGRFDKLIYVPPPDLNGRIEILKIHTRNMPLADDVDLYEIARLTEGYSGA 669

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            D+  + REAA+ A++EN++ +++ M+H   A+  V+PS      +L  ++ R
Sbjct: 670  DLEALVREAAMRALKENIEINKVYMRHFLEAMNEVRPSITQDIVKLYEEWGR 721



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/267 (45%), Positives = 175/267 (65%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP+V +ED+GG + +  ++ E VE P +H E F+R+G  PP GIL++GPPG  KTL+A+A
Sbjct: 184  VPRVTYEDIGGMKHIVQRVRELVELPLRHPELFRRLGIEPPKGILLYGPPGTGKTLLAKA 243

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+EA   F+A+ GPE+ SK+ GESE+ +R +F +A+ NAP+IIF DEID +A  R  E 
Sbjct: 244  VANEAEAYFIAINGPEIISKFYGESEQRLREIFEQAKKNAPAIIFIDEIDAIAPKR-DEV 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL  R +V VIAATNRP+ +DPAL RPGRFDR + V  P++ 
Sbjct: 303  MG-EVERRVVAQLLALMDGLESRGDVIVIAATNRPNALDPALRRPGRFDREIEVPLPDKQ 361

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EI +IH R +P ++DV++ +LA ++ G TGADI+ + +EAA+ A+            
Sbjct: 362  GRLEILQIHTRGMPLANDVDLNKLAEITHGYTGADIAALVKEAALHALRRYMPEIDLESE 421

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E L+   + M+    A + + PS
Sbjct: 422  TIPVEVLEKMEVRMEDFLAAYKEIVPS 448



 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 105/209 (50%), Positives = 141/209 (67%), Gaps = 15/209 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P KG+LL+GPPGTGKT LA+  A+++      +NGPE++S+ YGESEQ L E+F+ 
Sbjct: 219 LGIEPPKGILLYGPPGTGKTLLAKAVANEAEAYFIAINGPEIISKFYGESEQRLREIFEQ 278

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A ++APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNRP++
Sbjct: 279 AKKNAPAIIFIDEIDAIAPKRDEVMGEVERRVVAQLLALMDGLESRGDVIVIAATNRPNA 338

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           ++PALRRPGR DREIE+ +              P    RLEIL     GM  +  D ++ 
Sbjct: 339 LDPALRRPGRFDREIEVPL--------------PDKQGRLEILQIHTRGMPLA-NDVDLN 383

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRRY 647
            L+  THG+ GAD+AAL  EAAL  LRRY
Sbjct: 384 KLAEITHGYTGADIAALVKEAALHALRRY 412



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 131/215 (60%), Gaps = 20/215 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                LG++P +G+LL+GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ 
Sbjct: 487 EVFKRLGIKPPRGILLYGPPGTGKTLLAKAVATESGANFIAVRGPEILSKWVGESEKAIR 546

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           E+F  A   APAV+F DE+DAIAPAR    +  +++R+V+ LL  MDG+ R D V+VIAA
Sbjct: 547 EIFRKARLYAPAVIFFDEIDAIAPARGYAFDSRVTERIVSQLLTEMDGINRLDNVVVIAA 606

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGMEH 610
           TNRPD ++PAL RPGR D+ I                 VP P    R+EIL      M  
Sbjct: 607 TNRPDILDPALLRPGRFDKLI----------------YVPPPDLNGRIEILKIHTRNMPL 650

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           +  D ++  ++  T G+ GADL AL  EAA+  L+
Sbjct: 651 A-DDVDLYEIARLTEGYSGADLEALVREAAMRALK 684


>gi|395541774|ref|XP_003772813.1| PREDICTED: spermatogenesis-associated protein 5 [Sarcophilus
            harrisii]
          Length = 836

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 154/298 (51%), Positives = 214/298 (71%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
             E G ++K+ L DF +A  +V+PSAMREV ++VP V   D+GG  ++K +L +AVEWP K
Sbjct: 533  GEVGESVKVTLGDFLQAMNEVQPSAMREVAIDVPNVSLSDIGGLEDIKLKLKQAVEWPLK 592

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            + EAF R+G +PPTGIL++GPPGCSKT++A+A+A+E+GLNFLAVKGPEL  K+VG+SE+A
Sbjct: 593  YPEAFARMGIQPPTGILLYGPPGCSKTMIAKALANESGLNFLAVKGPELMDKYVGQSERA 652

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            VR +F KARA APSI+FFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +V +
Sbjct: 653  VREIFKKARAVAPSILFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVII 712

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
            +AATNRPDKID AL+RPGRFDR++YV  P+   R EIFR+     P   DV++ EL C +
Sbjct: 713  LAATNRPDKIDKALMRPGRFDRIIYVPLPDAATRREIFRLQFSSKPVGPDVDLEELVCQT 772

Query: 977  EGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            +  +GA+I+ +C EA + A+EEN+ A  I  +H   A+  V P    S +   A + +
Sbjct: 773  DTYSGAEITAVCSEAGLLALEENIQAKYIMKRHFAEALNIVTPRIPESMRHFYADYHK 830



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/265 (42%), Positives = 160/265 (60%), Gaps = 25/265 (9%)

Query: 396 QIEFQNVQATVEQDISK-------LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGV 447
           +  F   Q   E+D S        +GGL+ +   ++++I +           G+ P +GV
Sbjct: 275 KFNFVKPQTATEEDDSPRKVTYDLIGGLTSQLKAIREMIELPLKQPELFKKYGIAPPRGV 334

Query: 448 LLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVV 507
           LL+GPPGTGKT +AR  A++ G  L  +NGPEV+S+ YG SE  L ++F  A+   P+++
Sbjct: 335 LLYGPPGTGKTMIARAIANEVGAYLSVINGPEVISKFYGASEARLRQIFAEATLRQPSII 394

Query: 508 FIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALR 564
           FIDELDA+ P R+    E+ +R+VA+LL LMDG+    ++G VLVI ATNRP +++ ALR
Sbjct: 395 FIDELDALCPKREGSENEVEKRVVASLLTLMDGIGSEGSEGRVLVIGATNRPHTLDSALR 454

Query: 565 RPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT 624
           RPGR D+EIEI               VP+   RL+IL  LL G+ H L ++E+  L+ + 
Sbjct: 455 RPGRFDKEIEI--------------GVPNAQDRLDILQKLLRGVPHGLQEAELVQLANSA 500

Query: 625 HGFVGADLAALCNEAALVCLRRYSK 649
           HG+VGADL ALCNEA L   RR  K
Sbjct: 501 HGYVGADLKALCNEAGLHAWRRVQK 525



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/270 (37%), Positives = 153/270 (56%), Gaps = 20/270 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK+ G  PP G+L++GPPG  KT++ARA+A
Sbjct: 293  KVTYDLIGGLTSQLKAIREMIELPLKQPELFKKYGIAPPRGVLLYGPPGTGKTMIARAIA 352

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESD 889
            +E G     + GPE+ SK+ G SE  +R +FA+A    PSIIF DE+D L   R G E++
Sbjct: 353  NEVGAYLSVINGPEVISKFYGASEARLRQIFAEATLRQPSIIFIDELDALCPKREGSENE 412

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               V  RV++ LL  +DG+    +   V VI ATNRP  +D AL RPGRFD+ + +G PN
Sbjct: 413  ---VEKRVVASLLTLMDGIGSEGSEGRVLVIGATNRPHTLDSALRRPGRFDKEIEIGVPN 469

Query: 947  ETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISA---IEENL-- 1000
              DR +I +  LR +P    +  + +LA  + G  GAD+  +C EA + A   +++ L  
Sbjct: 470  AQDRLDILQKLLRGVPHGLQEAELVQLANSAHGYVGADLKALCNEAGLHAWRRVQKQLPD 529

Query: 1001 -------DASRITMQHLKTAIRHVQPSEIH 1023
                   ++ ++T+     A+  VQPS + 
Sbjct: 530  LPNGEVGESVKVTLGDFLQAMNEVQPSAMR 559



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 18/238 (7%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           +S +GGL      LK  +          + +G++P  G+LL+GPPG  KT +A+  A++S
Sbjct: 570 LSDIGGLEDIKLKLKQAVEWPLKYPEAFARMGIQPPTGILLYGPPGCSKTMIAKALANES 629

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEEL 526
           G+N   V GPE++ +  G+SE+A+ E+F  A   AP+++F DELDA+A  R    G   +
Sbjct: 630 GLNFLAVKGPELMDKYVGQSERAVREIFKKARAVAPSILFFDELDALAVERGSSSGAGNV 689

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           + R++A LL  MDG+ +   V+++AATNRPD I+ AL RPGR DR I + +         
Sbjct: 690 ADRVLAQLLTEMDGIEQLKDVIILAATNRPDKIDKALMRPGRFDRIIYVPL--------- 740

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                P  A R EI     S       D ++E L   T  + GA++ A+C+EA L+ L
Sbjct: 741 -----PDAATRREIFRLQFSSKPVG-PDVDLEELVCQTDTYSGAEITAVCSEAGLLAL 792


>gi|341898135|gb|EGT54070.1| hypothetical protein CAEBREN_07013 [Caenorhabditis brenneri]
          Length = 831

 Score =  330 bits (846), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 216/675 (32%), Positives = 352/675 (52%), Gaps = 116/675 (17%)

Query: 413  LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
            +GG  +++  +  + +      T ++LG+ P +G ++HGPPG GKT  A+  A + G+ +
Sbjct: 224  IGGADRQFLEVCRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTLFAQAVAGELGLPM 283

Query: 473  FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVA 532
              +   E++S   GE+E+ +  +FD+A Q++P ++ +D++DAIAP R+    E+ +R+V+
Sbjct: 284  LQLAATELISGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQREMERRVVS 343

Query: 533  TLLNLMDGVC------------------------------RTDGVLVIAATNRPDSIEPA 562
             L + +D +                                + GVLVI  T+RPD+++  
Sbjct: 344  QLCSSLDELVLPPREKPLKDQLTFGDDGSIAILNEPTSSSLSSGVLVIGTTSRPDAVDGG 403

Query: 563  LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM 622
            LRR GR + EI +               +P    R +IL  +     +   D  ++ ++ 
Sbjct: 404  LRRAGRFENEISL--------------GIPDERAREKILEKICR--VNLADDVTLKQIAK 447

Query: 623  ATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRN 682
             T G+VGADL AL  EAA V + R                +F      DT++  ++  +N
Sbjct: 448  LTPGYVGADLQALIREAAKVAIDR----------------VF------DTIVAKNEGHKN 485

Query: 683  IT-ESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC 741
            +T E  ++ LD                              +  G  D S    +SE   
Sbjct: 486  LTVEQIKEELDRVL--------------------------AWLQGEDDPSA---LSELNG 516

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             L++   DFE+A   ++P+A RE    VP V WEDVG   EV+ QL  ++ +P K  + F
Sbjct: 517  GLRISFEDFERALATIQPAAKREGFATVPDVSWEDVGALVEVRKQLEWSILYPIKRADDF 576

Query: 802  KRIGT-RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
              +G    P GIL+ GPPGC KTL+A+AVA+E G+NF++VKGPEL + +VGESE+AVR++
Sbjct: 577  AALGIDSKPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTV 636

Query: 861  FAKARANAPSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIA 918
            F +AR + P +IFFDEID L   R  G+ S G     R+++QLL E+DG+  R  V +I 
Sbjct: 637  FQRARDSQPCVIFFDEIDALCPKRSLGESSGGA----RLVNQLLTEMDGVEGRKAVFLIG 692

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELACL 975
            ATNRPD +D A+LRPGR D++L+V  P+  DR +I R   +   +   + D++ +E+A L
Sbjct: 693  ATNRPDIVDSAILRPGRLDKILFVDFPSVEDRADILRKSTKNGTRPLLADDIDFQEIAQL 752

Query: 976  SE--GCTGADISLICREAAISA-----IEENLDASRITMQHLKTAIRHVQPSEIHSYKEL 1028
             E  G TGAD++ +  E+++ A     +E ++    + M+H + A   ++PS   + ++ 
Sbjct: 753  PELSGFTGADLAALIHESSLLALQARVLENDMTIKGVGMKHFREAAARIRPSVTEADRKK 812

Query: 1029 SAKFQRLVHSNAEAD 1043
                ++ V+   EAD
Sbjct: 813  YEHMKK-VYGLKEAD 826



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 144/264 (54%), Gaps = 31/264 (11%)

Query: 388 REGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGL--RPTK 445
           REG      + +++V A VE  + K      E++IL  I  +       ++LG+  +P +
Sbjct: 538 REGFATVPDVSWEDVGALVE--VRK----QLEWSILYPIKRADD----FAALGIDSKP-Q 586

Query: 446 GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPA 505
           G+LL GPPG GKT LA+  A+++G+N  +V GPE+++   GESE+A+  VF  A  S P 
Sbjct: 587 GILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPC 646

Query: 506 VVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRR 565
           V+F DE+DA+ P R  G      R+V  LL  MDGV     V +I ATNRPD ++ A+ R
Sbjct: 647 VIFFDEIDALCPKRSLGESSGGARLVNQLLTEMDGVEGRKAVFLIGATNRPDIVDSAILR 706

Query: 566 PGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT- 624
           PGRLD+ + +D               PS   R +IL          LL  ++++  +A  
Sbjct: 707 PGRLDKILFVDF--------------PSVEDRADILRKSTKNGTRPLLADDIDFQEIAQL 752

Query: 625 ---HGFVGADLAALCNEAALVCLR 645
               GF GADLAAL +E++L+ L+
Sbjct: 753 PELSGFTGADLAALIHESSLLALQ 776



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 129/262 (49%), Gaps = 38/262 (14%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQ--KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            VK+E +GG      Q +E        K  + F  +G  PP G ++ GPPGC KTL A+AV
Sbjct: 219  VKFEHIGG---ADRQFLEVCRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTLFAQAV 275

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E GL  L +   EL S   GE+E+ +R LF  A+ N+P I+  D+ID +A  R  E+ 
Sbjct: 276  AGELGLPMLQLAATELISGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRR--ETA 333

Query: 890  GVSVSDRVMSQLLVELDGL------------------------------HQRVNVTVIAA 919
               +  RV+SQL   LD L                                   V VI  
Sbjct: 334  QREMERRVVSQLCSSLDELVLPPREKPLKDQLTFGDDGSIAILNEPTSSSLSSGVLVIGT 393

Query: 920  TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 979
            T+RPD +D  L R GRF+  + +G P+E  RE+I    + ++  + DV ++++A L+ G 
Sbjct: 394  TSRPDAVDGGLRRAGRFENEISLGIPDERAREKILE-KICRVNLADDVTLKQIAKLTPGY 452

Query: 980  TGADISLICREAAISAIEENLD 1001
             GAD+  + REAA  AI+   D
Sbjct: 453  VGADLQALIREAAKVAIDRVFD 474


>gi|18312110|ref|NP_558777.1| ATPase AAA [Pyrobaculum aerophilum str. IM2]
 gi|18159541|gb|AAL62959.1| AAA family ATPase, possible cell division control protein cdc48
            [Pyrobaculum aerophilum str. IM2]
          Length = 731

 Score =  330 bits (846), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 152/278 (54%), Positives = 208/278 (74%), Gaps = 1/278 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + DF  A  ++ PSA+RE+ +EVP+V+WEDVGG   VK +L EAVEWP K+ + FK
Sbjct: 422  IKVTMTDFTSALREIVPSALREIHIEVPRVRWEDVGGLENVKQELREAVEWPLKYPDKFK 481

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            + G RPP GIL+FGPPG  KTL+A+AVA+E+G NF+AV+GPE+FSKWVGESEK VR +F 
Sbjct: 482  KFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREIFR 541

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+++F DEID LA  RG   D + V++RV++QLL E+DG+    NV VIAATNR
Sbjct: 542  KARMAAPAVVFIDEIDALATARGLGGDSL-VTERVVAQLLAEMDGIKALENVVVIAATNR 600

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R +I  IH R  P + DV++ ELA  +EG +GA
Sbjct: 601  PDLVDPALLRPGRFDRIIYVPPPDFKARLDILLIHTRSTPLAKDVDLEELARRTEGYSGA 660

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            D+ L+ REA   A+ E+++A  ++M+H + A++ V+PS
Sbjct: 661  DLELLVREATFLALREDINAKEVSMRHFEEAMKKVRPS 698



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 178/277 (64%), Gaps = 22/277 (7%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            +++P V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ GPPG  KTL+A
Sbjct: 171  VKIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLA 230

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 231  KAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKR-E 289

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRFDR +++ PP+
Sbjct: 290  EVTG-EVEKRVVAQLLTLMDGLQERGQVIVIGATNRPDAVDPALRRPGRFDREIWINPPD 348

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
               R EI  IH R +P + DV++R+LA ++ G +GAD++ + REAA+SA+          
Sbjct: 349  FKGRYEILLIHTRNMPLAPDVDLRKLAEMTHGFSGADLAALAREAAMSALRRAIQSGLID 408

Query: 998  --------ENLDASRITMQHLKTAIRHVQPS---EIH 1023
                    E  +  ++TM    +A+R + PS   EIH
Sbjct: 409  LNQPSIPPEVFEKIKVTMTDFTSALREIVPSALREIH 445



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/253 (44%), Positives = 150/253 (59%), Gaps = 18/253 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 205 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 264

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 265 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVIVIGATNR 324

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREI I+               P    R EIL      M  +  D 
Sbjct: 325 PDAVDPALRRPGRFDREIWINP--------------PDFKGRYEILLIHTRNMPLA-PDV 369

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFE-FEGHSDTML 674
           ++  L+  THGF GADLAAL  EAA+  LRR   IQ+    L+      E FE    TM 
Sbjct: 370 DLRKLAEMTHGFSGADLAALAREAAMSALRR--AIQSGLIDLNQPSIPPEVFEKIKVTMT 427

Query: 675 QDSDCSRNITESS 687
             +   R I  S+
Sbjct: 428 DFTSALREIVPSA 440



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/214 (47%), Positives = 129/214 (60%), Gaps = 22/214 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               GLRP KG+LL GPPGTGKT LA+  A +SG N   V GPE+ S+  GESE+ + E+
Sbjct: 480 FKKFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREI 539

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEEL-SQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +APAVVFIDE+DA+A AR  GG+ L ++R+VA LL  MDG+   + V+VIAATN
Sbjct: 540 FRKARMAAPAVVFIDEIDALATARGLGGDSLVTERVVAQLLAEMDGIKALENVVVIAATN 599

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGMEHSL 612
           RPD ++PAL RPGR DR I                 VP P    RL+IL  L+      L
Sbjct: 600 RPDLVDPALLRPGRFDRII----------------YVPPPDFKARLDIL--LIHTRSTPL 641

Query: 613 L-DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++E L+  T G+ GADL  L  EA  + LR
Sbjct: 642 AKDVDLEELARRTEGYSGADLELLVREATFLALR 675


>gi|449499701|ref|XP_002188452.2| PREDICTED: spermatogenesis-associated protein 5 [Taeniopygia guttata]
          Length = 855

 Score =  329 bits (844), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 154/302 (50%), Positives = 221/302 (73%)

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
            G++ +    ++ +   DF +    VRPSAMREV ++VPKV W D+GG  +VK +L +AVE
Sbjct: 547  GLWDTAVAGSVMIAFNDFLQGMNDVRPSAMREVAIDVPKVCWSDIGGLEDVKLKLKQAVE 606

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
            WP KH E+F R+G + P G+L++GPPGCSKT++A+A+A E+GLNFLAVKGPEL +K+VGE
Sbjct: 607  WPLKHPESFIRMGIQAPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGE 666

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+AVR +F KARA +PSI+FFDEID LA  RG  S   +V+DRV++QLL E+DG+ Q  
Sbjct: 667  SERAVREIFRKARAVSPSILFFDEIDALAVERGNSSGAGNVADRVLAQLLTEMDGIEQLK 726

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIREL 972
            +VT++AATNRPD+ID ALLRPGR DR++YV  P+   R+EIFR+H + +P S +V + EL
Sbjct: 727  DVTILAATNRPDRIDKALLRPGRIDRIIYVPLPDAATRKEIFRLHFQSMPVSDEVCLAEL 786

Query: 973  ACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKF 1032
               ++  +GA+I+ +CREAA+ A++E++ A  IT +H ++A+  V P    S  +  A +
Sbjct: 787  VEHTQKYSGAEITAVCREAALLALQEDIHAKSITGRHFRSALTVVSPRIPDSLIQFYADY 846

Query: 1033 QR 1034
            Q+
Sbjct: 847  QQ 848



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/293 (38%), Positives = 173/293 (59%), Gaps = 33/293 (11%)

Query: 358 SMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLS 417
           +M +    + I+  TK+    P  +V+             E    Q+ V  D+  +GGLS
Sbjct: 277 AMSNTDCFYFISSRTKINFVEPRTSVA-------------EDGKCQSQVTYDM--IGGLS 321

Query: 418 KEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVN 476
            +   +++ + +         S G+ P +GVLL+GPPGTGKT +A+  A++ G ++  +N
Sbjct: 322 SQLRTIRETVELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIAKAIANEVGAHVTVIN 381

Query: 477 GPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLN 536
           GPE++S+ YGESE  L ++F  AS   P+++FIDELDA+ P R+    E+ +R+VA+LL 
Sbjct: 382 GPEIISKFYGESESRLRQIFAEASLCRPSIIFIDELDALCPKREGTQNEVEKRVVASLLT 441

Query: 537 LMDGVC--RTDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPS 593
           LMDG+    ++G +LV+ ATNRP +++ ALRRPGR D+EIEI               +P+
Sbjct: 442 LMDGIGSESSEGQLLVLGATNRPHALDAALRRPGRFDKEIEI--------------GIPN 487

Query: 594 PAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              RL+IL  LL  + HSL   ++ +L+ + HG+VGADLAALC EA L  LRR
Sbjct: 488 AQDRLDILQKLLKKVPHSLTAEQLAHLADSAHGYVGADLAALCKEAGLYALRR 540



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 162/297 (54%), Gaps = 11/297 (3%)

Query: 713  RGTVSEIADNFHNGVSDSSGGMFMSEK-GCALKLELVDFEKARMKVRPSAMREVILEVPK 771
            RG  +++  +       S+ G+ ++ K G     +   F  +R K+     R  + E  K
Sbjct: 248  RGDGADLTQDLELAGEGSTEGLTLTGKMGAMSNTDCFYFISSRTKINFVEPRTSVAEDGK 307

Query: 772  ----VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
                V ++ +GG       + E VE P K  E FK  G  PP G+L++GPPG  KT++A+
Sbjct: 308  CQSQVTYDMIGGLSSQLRTIRETVELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIAK 367

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            A+A+E G +   + GPE+ SK+ GESE  +R +FA+A    PSIIF DE+D L   R  E
Sbjct: 368  AIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLCRPSIIFIDELDALCPKR--E 425

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
                 V  RV++ LL  +DG+    +   + V+ ATNRP  +D AL RPGRFD+ + +G 
Sbjct: 426  GTQNEVEKRVVASLLTLMDGIGSESSEGQLLVLGATNRPHALDAALRRPGRFDKEIEIGI 485

Query: 945  PNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            PN  DR +I +  L+K+P S +   +  LA  + G  GAD++ +C+EA + A+   L
Sbjct: 486  PNAQDRLDILQKLLKKVPHSLTAEQLAHLADSAHGYVGADLAALCKEAGLYALRRVL 542



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 125/212 (58%), Gaps = 23/212 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++  KGVLL+GPPG  KT +A+  AH+SG+N   V GPE++++  GESE+A+ E+F  
Sbjct: 618 MGIQAPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRK 677

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   +P+++F DE+DA+A  R +  G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 678 ARAVSPSILFFDEIDALAVERGNSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 737

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM---EHSLL 613
           D I+ AL RPGR+DR I + +              P  A R EI       M   +   L
Sbjct: 738 DRIDKALLRPGRIDRIIYVPL--------------PDAATRKEIFRLHFQSMPVSDEVCL 783

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              VE+    T  + GA++ A+C EAAL+ L+
Sbjct: 784 AELVEH----TQKYSGAEITAVCREAALLALQ 811


>gi|15669345|ref|NP_248150.1| cell division protein CDC48 [Methanocaldococcus jannaschii DSM 2661]
 gi|2492505|sp|Q58556.1|Y1156_METJA RecName: Full=Cell division cycle protein 48 homolog MJ1156
 gi|1591785|gb|AAB99153.1| cell division control protein 48 (cdc48), AAA family
            [Methanocaldococcus jannaschii DSM 2661]
          Length = 903

 Score =  329 bits (844), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 157/276 (56%), Positives = 208/276 (75%), Gaps = 1/276 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF++A   V PSAMREV++EVP VKWED+GG  EVK +L EAVEWP K +E F+
Sbjct: 420  LKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFE 479

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +IG RPP G+L+FGPPG  KTL+A+AVA+E+G NF++VKGPE+FSKWVGESEKA+R +F 
Sbjct: 480  KIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFR 539

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR +AP IIFFDEID +A  RG++    +V+D+V++QLL ELDG+ +  +V VIAATNR
Sbjct: 540  KARQSAPCIIFFDEIDAIAPKRGRDLSS-AVTDKVVNQLLTELDGMEEPKDVVVIAATNR 598

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGR DR++ V  P+E  R +IF+IH R +  + DVN+ ELA  +EG TGA
Sbjct: 599  PDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGA 658

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            DI  +CREAA+ A+ E++         L+  I ++Q
Sbjct: 659  DIEALCREAAMLAVRESIGKPWDIEVKLRELINYLQ 694



 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 128/292 (43%), Positives = 188/292 (64%), Gaps = 20/292 (6%)

Query: 745  LELVDFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            + + DF    +K  P S ++E   +VP V +ED+GG +E   ++ E +E P +H E F++
Sbjct: 150  VRVTDFTHVELKEEPVSEIKET--KVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEK 207

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+ +R +F +
Sbjct: 208  LGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEE 267

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            A  NAPSIIF DEID +A  R  E+ G  V  R+++QLL  +DGL  R  V VI ATNRP
Sbjct: 268  AEENAPSIIFIDEIDAIAPKRD-EATG-EVERRLVAQLLTLMDGLKGRGQVVVIGATNRP 325

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            + +DPAL RPGRFDR + +G P+   R+EI +IH R +P + DV++  LA ++ G  GAD
Sbjct: 326  NALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGAD 385

Query: 984  ISLICREAAISAI---------------EENLDASRITMQHLKTAIRHVQPS 1020
            ++ +C+EAA+ A+               +E LD  ++TM   K A++ V+PS
Sbjct: 386  LAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPS 437



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/255 (44%), Positives = 161/255 (63%), Gaps = 19/255 (7%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P ++I+   V     +DI   GGL +E   ++++I +          LG+ P KGVLL G
Sbjct: 164 PVSEIKETKVPDVTYEDI---GGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVG 220

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A+++G N + +NGPE++S+  GE+E+ L ++F+ A ++AP+++FIDE
Sbjct: 221 PPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDE 280

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNRP++++PALRRPGR DR
Sbjct: 281 IDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDR 340

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
           EI I               VP    R EIL      M  +  D +++YL+  THGFVGAD
Sbjct: 341 EIVI--------------GVPDREGRKEILQIHTRNMPLA-EDVDLDYLADVTHGFVGAD 385

Query: 632 LAALCNEAALVCLRR 646
           LAALC EAA+  LRR
Sbjct: 386 LAALCKEAAMRALRR 400



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 98/214 (45%), Positives = 131/214 (61%), Gaps = 16/214 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K     +G+RP KGVLL GPPGTGKT LA+  A++SG N  +V GPE+ S+  GESE+A+
Sbjct: 475 KEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAI 534

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            E+F  A QSAP ++F DE+DAIAP R +D    ++ ++V  LL  +DG+     V+VIA
Sbjct: 535 REIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIA 594

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLDR I +               VP    RL+I       M  +
Sbjct: 595 ATNRPDIIDPALLRPGRLDRVILV--------------PVPDEKARLDIFKIHTRSMNLA 640

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D  +E L+  T G+ GAD+ ALC EAA++ +R
Sbjct: 641 -EDVNLEELAKKTEGYTGADIEALCREAAMLAVR 673


>gi|395845776|ref|XP_003795598.1| PREDICTED: spermatogenesis-associated protein 5 [Otolemur garnettii]
          Length = 808

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 151/291 (51%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMREV ++VP V W D+GG   +K +L +A+EWP KH E+F 
Sbjct: 510  VKITLNDFLQAMNAIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAIEWPLKHPESFI 569

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+ASE+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 570  RMGIQPPKGVLLYGPPGCSKTMIAKALASESGLNFLAIKGPELMNKYVGESERAVREIFR 629

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 630  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 689

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF +    +P S DV++ EL   ++  +GA
Sbjct: 690  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFNLQFHSMPISDDVDLNELVLQTDTYSGA 749

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 750  EIIAMCREAALLALEEDIQANCIRKRHFTQALSAVTPRIPESLRRFYEDYQ 800



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A +SG+N   + GPE++++  GESE+A+ E+F  
Sbjct: 571 MGIQPPKGVLLYGPPGCSKTMIAKALASESGLNFLAIKGPELMNKYVGESERAVREIFRK 630

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 631 ARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 690

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI +     M  S  D +
Sbjct: 691 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFNLQFHSMPIS-DDVD 735

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           +  L + T  + GA++ A+C EAAL+ L
Sbjct: 736 LNELVLQTDTYSGAEIIAMCREAALLAL 763



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 94/143 (65%), Gaps = 3/143 (2%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +  +++++I +         S G+   +GVLL+GPPGTGKT
Sbjct: 343 QDNQFRVTYDM--IGGLNSQLKVIREMIELPLKQPKLFKSYGIPSPRGVLLYGPPGTGKT 400

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE+VS+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 401 MIARAIANEVGAYVSVINGPEIVSKFYGETEARLRQLFAEATLRHPSIIFIDELDALCPK 460

Query: 519 RKDGGEELSQRMVATLLNLMDGV 541
           R+    E+ +R+VA+LL LMDG+
Sbjct: 461 REGAQNEVEKRVVASLLTLMDGI 483



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 81/138 (58%), Gaps = 2/138 (1%)

Query: 771 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
           +V ++ +GG       + E +E P K  + FK  G   P G+L++GPPG  KT++ARA+A
Sbjct: 348 RVTYDMIGGLNSQLKVIREMIELPLKQPKLFKSYGIPSPRGVLLYGPPGTGKTMIARAIA 407

Query: 831 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
           +E G     + GPE+ SK+ GE+E  +R LFA+A    PSIIF DE+D L   R  E   
Sbjct: 408 NEVGAYVSVINGPEIVSKFYGETEARLRQLFAEATLRHPSIIFIDELDALCPKR--EGAQ 465

Query: 891 VSVSDRVMSQLLVELDGL 908
             V  RV++ LL  +DG+
Sbjct: 466 NEVEKRVVASLLTLMDGI 483


>gi|150403099|ref|YP_001330393.1| AAA family ATPase [Methanococcus maripaludis C7]
 gi|150034129|gb|ABR66242.1| AAA family ATPase, CDC48 subfamily [Methanococcus maripaludis C7]
          Length = 800

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 149/296 (50%), Positives = 217/296 (73%), Gaps = 4/296 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+   DF     +V PSA+REV++EVP +KW DVGG  ++K  L EAVEWP K++E F+
Sbjct: 491  IKVTKSDFMGGLKEVEPSALREVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNREMFE 550

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G RPP G+L+FGPPG  KTL+A+AVA+E+  NF++VKGPE+FSKWVGESEKA+R +F 
Sbjct: 551  RMGIRPPKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFR 610

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IFFDEID +A  RG    G  VS++V++QLL ELDGL +  +V +IAATNR
Sbjct: 611  KARQAAPTVIFFDEIDSIAPKRGMSFGGSGVSEKVVNQLLTELDGLEEPKDVVIIAATNR 670

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            P+ +DPALLRPGR DR++ V  P+E  R EIF++H + +P   DV++++LA  + G TGA
Sbjct: 671  PNLLDPALLRPGRLDRIVLVSIPDENARFEIFKVHTKGMPTGKDVDLQKLARETNGYTGA 730

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            DI  +CREAA+ A+ E++++  + ++H + A + + PS    ++  Y++L+ ++ R
Sbjct: 731  DIEALCREAAMIALREDINSKHVELRHFEAAFKRIAPSVKDEDMEEYRDLAKEYGR 786



 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 106/228 (46%), Positives = 148/228 (64%), Gaps = 5/228 (2%)

Query: 749 DFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
           ++ +  +K  P + ++E   +VP V +ED+GG +E   ++ E VE P +H E F+++G  
Sbjct: 152 EYTQIELKTEPVTELKET--KVPNVTYEDIGGLKEEVKKIREMVELPMRHPELFEKLGIE 209

Query: 808 PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
           PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPEL SK+VGE+E+ +R +F +A  N
Sbjct: 210 PPKGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPELMSKYVGETEENLRKIFEEAEEN 269

Query: 868 APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
           +PSIIF DEID +A  R + S    V  R+++QLL  LDGL  R  V ++AATNRPD ID
Sbjct: 270 SPSIIFIDEIDAVAPKRDEASG--EVERRMVAQLLTLLDGLEGRGQVVILAATNRPDSID 327

Query: 928 PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL 975
            AL RPGR DR L +G P+   R EI +IH R +P   D    E+  L
Sbjct: 328 MALRRPGRLDRELTIGIPDRHARNEILQIHTRNMPLQPDYEKDEVIPL 375



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/320 (36%), Positives = 170/320 (53%), Gaps = 72/320 (22%)

Query: 386 SLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPT 444
            L+E  +PN   E              +GGL +E   +++++ +          LG+ P 
Sbjct: 165 ELKETKVPNVTYE-------------DIGGLKEEVKKIREMVELPMRHPELFEKLGIEPP 211

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           KGVLL GPPGTGKT LA+  A+++G N +T+NGPE++S+  GE+E+ L ++F+ A +++P
Sbjct: 212 KGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPELMSKYVGETEENLRKIFEEAEENSP 271

Query: 505 AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
           +++FIDE+DA+AP R +   E+ +RMVA LL L+DG+     V+++AATNRPDSI+ ALR
Sbjct: 272 SIIFIDEIDAVAPKRDEASGEVERRMVAQLLTLLDGLEGRGQVVILAATNRPDSIDMALR 331

Query: 565 RPGRLDREIEIDM-------SFLFSLLKNSP----------------------------- 588
           RPGRLDRE+ I +         L    +N P                             
Sbjct: 332 RPGRLDRELTIGIPDRHARNEILQIHTRNMPLQPDYEKDEVIPLLNELIGEFDRSKIENI 391

Query: 589 ----AAVPSPAQ--RL-EILHALLSG--MEHSLLDSEVE-------------YLSMATHG 626
                 VPS  +  +L E +  + SG  +E  L D ++E              L+  THG
Sbjct: 392 VKLVEKVPSDEEIKKLPENIEKIPSGEQIEKILKDEDIEDKVKVRLNQMMVKELADKTHG 451

Query: 627 FVGADLAALCNEAALVCLRR 646
           F GADLAAL  EAA+  LRR
Sbjct: 452 FAGADLAALSKEAAMKTLRR 471



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 17/215 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           +     +G+RP KGVLL GPPGTGKT LA+  A++S  N  +V GPE+ S+  GESE+A+
Sbjct: 546 REMFERMGIRPPKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAI 605

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
            E+F  A Q+AP V+F DE+D+IAP R    GG  +S+++V  LL  +DG+     V++I
Sbjct: 606 REIFRKARQAAPTVIFFDEIDSIAPKRGMSFGGSGVSEKVVNQLLTELDGLEEPKDVVII 665

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNRP+ ++PAL RPGRLDR + +              ++P    R EI      GM  
Sbjct: 666 AATNRPNLLDPALLRPGRLDRIVLV--------------SIPDENARFEIFKVHTKGMPT 711

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D +++ L+  T+G+ GAD+ ALC EAA++ LR
Sbjct: 712 G-KDVDLQKLARETNGYTGADIEALCREAAMIALR 745


>gi|260833506|ref|XP_002611698.1| hypothetical protein BRAFLDRAFT_117082 [Branchiostoma floridae]
 gi|229297069|gb|EEN67708.1| hypothetical protein BRAFLDRAFT_117082 [Branchiostoma floridae]
          Length = 859

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 150/277 (54%), Positives = 212/277 (76%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF  A  +V+PSAMREV+++VPKV+W D+GGQ  +K +L +AVEWP K+ EAF+
Sbjct: 561  VQVSMEDFVLALKEVKPSAMREVMIDVPKVRWSDIGGQAGIKQKLQQAVEWPLKNPEAFQ 620

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G RPP GILM+GPPGCSKTL+ARA+A+E+GLNF+AVKGPELFSKWVGESE AVR +F 
Sbjct: 621  RMGIRPPQGILMYGPPGCSKTLIARALATESGLNFIAVKGPELFSKWVGESELAVREVFR 680

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSI+FFDEID LA  RG    G +V+DRV++QLL E+DG+ +  +VTV+AATNR
Sbjct: 681  KARAAAPSIVFFDEIDALAVSRGSSGGGNNVADRVLAQLLTEIDGVDKLGDVTVVAATNR 740

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR+LY+  P+   R +I +I  + +P + D+++  L   ++  +GA
Sbjct: 741  PDMIDKALLRPGRIDRILYIPLPDADTRRDILKIQFKTMPVTQDLDVDWLVEKTKNYSGA 800

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            ++  +C+EAA+SA+ +++ A  +  +H + A++ V P
Sbjct: 801  EVVAVCQEAALSALTDDIKAEFVLRRHFEQALQAVCP 837



 Score =  183 bits (464), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 138/228 (60%), Gaps = 34/228 (14%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLSKE +I++D++ +  +      SLG+ P  GVLL GPPGTGKT +AR+ A + G  
Sbjct: 344 IGGLSKELSIIRDMVELPLTSLEAFRSLGVAPPYGVLLFGPPGTGKTMVARVLAAEIGAT 403

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T+NGPEV+S+                    P+++FIDELDA+ P R++   E+ +R+V
Sbjct: 404 FITINGPEVLSKT-------------------PSIIFIDELDALCPKRENVQSEMEKRVV 444

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           ATLL LMDG      V+V+ ATNRPD+++PALRRPGR DRE+E+               +
Sbjct: 445 ATLLTLMDGSGVPGQVVVLGATNRPDAVDPALRRPGRFDREVEL--------------PI 490

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
           P+  QR +IL  L+  M H+L   ++  ++ + HG+VGADL A+C E 
Sbjct: 491 PNAVQRADILSCLMRKMPHNLSPEDITRIADSAHGYVGADLTAVCKEG 538



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+RP +G+L++GPPG  KT +AR  A +SG+N   V GPE+ S+  GESE A+ EVF  
Sbjct: 622 MGIRPPQGILMYGPPGCSKTLIARALATESGLNFIAVKGPELFSKWVGESELAVREVFRK 681

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A  +AP++VF DE+DA+A +R    GG  ++ R++A LL  +DGV +   V V+AATNRP
Sbjct: 682 ARAAAPSIVFFDEIDALAVSRGSSGGGNNVADRVLAQLLTEIDGVDKLGDVTVVAATNRP 741

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR + I +              P    R +IL      M  +  D +
Sbjct: 742 DMIDKALLRPGRIDRILYIPL--------------PDADTRRDILKIQFKTMPVT-QDLD 786

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           V++L   T  + GA++ A+C EAAL  L
Sbjct: 787 VDWLVEKTKNYSGAEVVAVCQEAALSAL 814



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 140/262 (53%), Gaps = 33/262 (12%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            ++ +GG  +  + + + VE P    EAF+ +G  PP G+L+FGPPG  KT++AR +A+E 
Sbjct: 341  YDMIGGLSKELSIIRDMVELPLTSLEAFRSLGVAPPYGVLLFGPPGTGKTMVARVLAAEI 400

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            G  F+ + GPE+ SK                    PSIIF DE+D L   R  E+    +
Sbjct: 401  GATFITINGPEVLSK-------------------TPSIIFIDELDALCPKR--ENVQSEM 439

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG      V V+ ATNRPD +DPAL RPGRFDR + +  PN   R +I
Sbjct: 440  EKRVVATLLTLMDGSGVPGQVVVLGATNRPDAVDPALRRPGRFDREVELPIPNAVQRADI 499

Query: 954  FRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL------DAS--- 1003
                +RK+P + S  +I  +A  + G  GAD++ +C+E    +I +        D S   
Sbjct: 500  LSCLMRKMPHNLSPEDITRIADSAHGYVGADLTAVCKEGKNLSIADQCTQTSASDGSLAQ 559

Query: 1004 --RITMQHLKTAIRHVQPSEIH 1023
              +++M+    A++ V+PS + 
Sbjct: 560  TVQVSMEDFVLALKEVKPSAMR 581


>gi|45357739|ref|NP_987296.1| cell division protein CDC48 [Methanococcus maripaludis S2]
 gi|45047299|emb|CAF29732.1| CDC48 cell division cycle protein family member [Methanococcus
            maripaludis S2]
          Length = 788

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 151/294 (51%), Positives = 214/294 (72%), Gaps = 4/294 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+   DF     +V PSA+REV++EVP +KW DVGG  ++K  L EAVEWP K++E F+
Sbjct: 475  IKVTKEDFVGGLKEVEPSALREVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNKEMFE 534

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G RPP G+L+FGPPG  KTL+A+AVA+E+  NF++VKGPE+FSKWVGESEKA+R +F 
Sbjct: 535  RMGIRPPKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFR 594

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IFFDEID +A  RG +     V+++V++QLL ELDGL +  +V +IAATNR
Sbjct: 595  KARQAAPTVIFFDEIDSVAPKRGMDFGSSGVTEKVVNQLLTELDGLEEPKDVVIIAATNR 654

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +D ALLRPGR DR++ V  PNET R EIF++H + +P   DVN+ +LA  ++G TGA
Sbjct: 655  PDILDQALLRPGRLDRIVLVPIPNETARLEIFKVHTKGMPIGKDVNLEKLAKETKGYTGA 714

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            DI  +CREAA+ A+ EN+++  +  +H   A + + PS    ++  YK+L+ ++
Sbjct: 715  DIEAVCREAAMIALRENINSEHVESRHFDGAFKRIAPSVKDDDMDEYKDLAKEY 768



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 99/219 (45%), Positives = 144/219 (65%), Gaps = 5/219 (2%)

Query: 749 DFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
           ++ +  +K  P + ++E   +VP V +ED+GG +E   ++ E VE P ++ E F ++G  
Sbjct: 152 EYTQIELKTEPVTELKET--KVPNVTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIE 209

Query: 808 PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
           PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+ +R +F +A  N
Sbjct: 210 PPKGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEEN 269

Query: 868 APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
           +PSIIF DEID +A  R + S    V  R+++QLL  +DGL  R  + ++AATNRPD ID
Sbjct: 270 SPSIIFIDEIDAVAPKRDEASG--EVERRMVAQLLTLMDGLESRGQLVILAATNRPDSID 327

Query: 928 PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD 966
            AL RPGR DR + +G P+   R EI +IH R +P   D
Sbjct: 328 MALRRPGRLDREITIGIPDRHGRNEILQIHTRNMPLQPD 366



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 56/305 (18%)

Query: 386 SLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPT 444
            L+E  +PN   E              +GGL +E   +++++ +          LG+ P 
Sbjct: 165 ELKETKVPNVTYE-------------DIGGLKEEVKKIREMVELPMRYPELFDKLGIEPP 211

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           KGVLL GPPGTGKT LA+  A+++G N +T+NGPE++S+  GE+E+ L ++F+ A +++P
Sbjct: 212 KGVLLAGPPGTGKTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSP 271

Query: 505 AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
           +++FIDE+DA+AP R +   E+ +RMVA LL LMDG+     ++++AATNRPDSI+ ALR
Sbjct: 272 SIIFIDEIDAVAPKRDEASGEVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALR 331

Query: 565 RPGRLDREIEI---DMSFLFSLLKNSPAAVP-----SPAQRLEILHALLSGMEHS----- 611
           RPGRLDREI I   D      +L+     +P       +  + IL+ L+   + S     
Sbjct: 332 RPGRLDREITIGIPDRHGRNEILQIHTRNMPLQPDYEKSDVISILNELVGEYDRSKIESL 391

Query: 612 ----------------LLDSEVE-------------YLSMATHGFVGADLAALCNEAALV 642
                           L D EVE              L+  THGF GADLAAL  EAA+ 
Sbjct: 392 VKLVEKASSEEEIEKILKDGEVEDKVKVKLNQLMVKELADKTHGFAGADLAALSKEAAMK 451

Query: 643 CLRRY 647
            LRR+
Sbjct: 452 TLRRF 456



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/215 (42%), Positives = 130/215 (60%), Gaps = 17/215 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K     +G+RP KGVLL GPPGTGKT LA+  A++S  N  +V GPE+ S+  GESE+A+
Sbjct: 530 KEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAI 589

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
            E+F  A Q+AP V+F DE+D++AP R    G   +++++V  LL  +DG+     V++I
Sbjct: 590 REIFRKARQAAPTVIFFDEIDSVAPKRGMDFGSSGVTEKVVNQLLTELDGLEEPKDVVII 649

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNRPD ++ AL RPGRLDR + +               +P+   RLEI      GM  
Sbjct: 650 AATNRPDILDQALLRPGRLDRIVLV--------------PIPNETARLEIFKVHTKGMPI 695

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D  +E L+  T G+ GAD+ A+C EAA++ LR
Sbjct: 696 G-KDVNLEKLAKETKGYTGADIEAVCREAAMIALR 729


>gi|312137192|ref|YP_004004529.1| ATPase AAA [Methanothermus fervidus DSM 2088]
 gi|311224911|gb|ADP77767.1| AAA family ATPase, CDC48 subfamily [Methanothermus fervidus DSM 2088]
          Length = 732

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 147/273 (53%), Positives = 204/273 (74%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +++PSA+REV ++VP V W+DVGG  +VK +L E VEWP K+ E FK+ G +P
Sbjct: 450  DFKNALKEIQPSALREVTVQVPNVTWDDVGGLEDVKQELRETVEWPLKYPEKFKKFGIKP 509

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+E+G NF+A+KGPEL SKWVGESEK VR +F KAR  A
Sbjct: 510  PKGVLLYGPPGTGKTLLAKAVANESGANFIAIKGPELLSKWVGESEKGVREVFRKARQTA 569

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+FFDEID +A+ R   S    V+ RV++QLL E+DGL +  +V V+AATNRPD IDP
Sbjct: 570  PTIVFFDEIDAIASTRTGISADSGVTQRVVNQLLTEIDGLEELEDVVVLAATNRPDIIDP 629

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDR + +G P++  R +IF++H R +P + DV++ +LA ++EG  GADI  +C
Sbjct: 630  ALLRPGRFDRQIKIGKPDKETRLKIFKVHTRNMPLADDVDLEKLAEMTEGFVGADIEAVC 689

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSE 1021
            REAA+  + ENLDA  + M++ K AI  ++P +
Sbjct: 690  REAALMTLRENLDAEEVPMKNFKKAIEKIKPQK 722



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/267 (44%), Positives = 171/267 (64%), Gaps = 16/267 (5%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG +E   ++ E +E P K+ E F+R+G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 201  VTYEDIGGMKEAIQKVREMIEIPLKNPELFERLGIEPPKGVLLHGPPGTGKTLLAKAVAN 260

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F+A+ GPE+ SK+VG SE+ +R +F +A  NAPSIIF DEID +A  R +E  G 
Sbjct: 261  ESDAHFIAINGPEIMSKYVGGSEERLREIFKEAEENAPSIIFIDEIDAIAPKR-EEVTG- 318

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R+++QLL  +DGL  R  V VI ATNRPD +DPAL RPGRFDR + +G P+  +R+
Sbjct: 319  EVERRIVAQLLTLMDGLKARGQVIVIGATNRPDALDPALRRPGRFDREIEIGVPDRDERK 378

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI  IH R +P + DV++ ELA ++ G  GAD+  +C+EAA+  +               
Sbjct: 379  EILEIHTRGMPLADDVDLDELADVTHGFVGADLEALCKEAAMRVLRRILPKIKGKEKVPR 438

Query: 998  ENLDASRITMQHLKTAIRHVQPSEIHS 1024
            E L    +T +  K A++ +QPS +  
Sbjct: 439  EVLKEMVVTREDFKNALKEIQPSALRE 465



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 157/250 (62%), Gaps = 16/250 (6%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           E + +++  +     +GG+ +    ++++I I          LG+ P KGVLLHGPPGTG
Sbjct: 191 EIEGIKSLTDVTYEDIGGMKEAIQKVREMIEIPLKNPELFERLGIEPPKGVLLHGPPGTG 250

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A++S  +   +NGPE++S+  G SE+ L E+F  A ++AP+++FIDE+DAIA
Sbjct: 251 KTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLREIFKEAEENAPSIIFIDEIDAIA 310

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R++   E+ +R+VA LL LMDG+     V+VI ATNRPD+++PALRRPGR DREIEI 
Sbjct: 311 PKREEVTGEVERRIVAQLLTLMDGLKARGQVIVIGATNRPDALDPALRRPGRFDREIEI- 369

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                         VP   +R EIL     GM  +  D +++ L+  THGFVGADL ALC
Sbjct: 370 -------------GVPDRDERKEILEIHTRGMPLA-DDVDLDELADVTHGFVGADLEALC 415

Query: 637 NEAALVCLRR 646
            EAA+  LRR
Sbjct: 416 KEAAMRVLRR 425



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 21/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G++P KGVLL+GPPGTGKT LA+  A++SG N   + GPE++S+  GESE+ + EV
Sbjct: 502 FKKFGIKPPKGVLLYGPPGTGKTLLAKAVANESGANFIAIKGPELLSKWVGESEKGVREV 561

Query: 496 FDSASQSAPAVVFIDELDAIAPARK----DGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           F  A Q+AP +VF DE+DAIA  R     D G  ++QR+V  LL  +DG+   + V+V+A
Sbjct: 562 FRKARQTAPTIVFFDEIDAIASTRTGISADSG--VTQRVVNQLLTEIDGLEELEDVVVLA 619

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGR DR+I+I                P    RL+I       M  +
Sbjct: 620 ATNRPDIIDPALLRPGRFDRQIKI--------------GKPDKETRLKIFKVHTRNMPLA 665

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++E L+  T GFVGAD+ A+C EAAL+ LR
Sbjct: 666 -DDVDLEKLAEMTEGFVGADIEAVCREAALMTLR 698


>gi|301769913|ref|XP_002920373.1| PREDICTED: spermatogenesis-associated protein 5-like [Ailuropoda
            melanoleuca]
          Length = 894

 Score =  328 bits (842), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 151/291 (51%), Positives = 212/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 596  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 655

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 656  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 715

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +VSDRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 716  KARAVAPSIIFFDELDALAVERGSSSGAGNVSDRVLAQLLTEMDGIEQLKDVTILAATNR 775

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF +    +P S+DV++ EL   ++  +GA
Sbjct: 776  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFNLQFHSMPISNDVDLDELILQTDTYSGA 835

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +    ++Q
Sbjct: 836  EIIAVCREAALLALEEDIQANCIMRRHFTQALSTVTPRIPKSLRRFYEEYQ 886



 Score =  209 bits (533), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 114/256 (44%), Positives = 162/256 (63%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+ P +GVLL+GPPGTGKT
Sbjct: 345 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 402

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 403 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEAALRHPSIIFIDELDALCPK 462

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 463 REGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 522

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+ A RL+IL  LL  + H L ++E+  L+   HG+VGADL AL
Sbjct: 523 --------------GVPNAADRLDILQKLLQRVPHMLTEAELLQLANNAHGYVGADLKAL 568

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 569 CNEAGLYALRRVLKKQ 584



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 350  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 409

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 410  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEAALRHPSIIFIDELDALCPKR--EGAQ 467

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 468  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 527

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  L+++P   ++  + +LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 528  ADRLDILQKLLQRVPHMLTEAELLQLANNAHGYVGADLKALCNEAGLYALRRVLKKQPNL 587

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT+      +  ++PS + 
Sbjct: 588  SDSKIAGLVKITLNDFLQGMNDIRPSAMR 616



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 127/208 (61%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E+F  
Sbjct: 657 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRK 716

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   +S R++A LL  MDG+ +   V ++AATNRP
Sbjct: 717 ARAVAPSIIFFDELDALAVERGSSSGAGNVSDRVLAQLLTEMDGIEQLKDVTILAATNRP 776

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI +     M  S  D +
Sbjct: 777 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFNLQFHSMPIS-NDVD 821

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 822 LDELILQTDTYSGAEIIAVCREAALLAL 849


>gi|327292485|ref|XP_003230941.1| AAA family ATPase [Trichophyton rubrum CBS 118892]
 gi|326466878|gb|EGD92331.1| AAA family ATPase [Trichophyton rubrum CBS 118892]
          Length = 818

 Score =  328 bits (841), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 221/642 (34%), Positives = 335/642 (52%), Gaps = 94/642 (14%)

Query: 413  LGGLSKEYAILKDIIISSSVKSTLSSLG--LRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
            LGGL+ + A++ + +   +    +  +      T G+L++G  GTGK+++       +  
Sbjct: 240  LGGLAPQLAVVNERLQDFNTHDQMIIMPSFYTSTGGILIYGAKGTGKSAMLAKIGETNWR 299

Query: 471  NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE---ELS 527
              F V    + S+  G+    L ++F  A +  P+++ ID+LD IAP R   G     LS
Sbjct: 300  RTFNVTS-SITSRTGGDGAAVLRKIFSDALKYQPSLIKIDQLDFIAPKRSSAGSTDASLS 358

Query: 528  QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
              +   L +L D       VLV+A T  P+ ++ +LR P RL  EIE+            
Sbjct: 359  PALCEALDSLQDS-----KVLVVACTRHPNDVDDSLRTPHRLGIEIELQ----------- 402

Query: 588  PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
               +P+   RLEIL AL  G      +  +E ++  THG+VGADL +L     L C +  
Sbjct: 403  ---IPTSKSRLEILQAL-RGSATQPTNRVLETIAAKTHGYVGADLLSLLQ---LSCRKAK 455

Query: 648  SKIQTS------SDVLHSTGTLF---EFEGHSDTMLQDSDCSRNITESSRDCLDSASPCT 698
            +++ +       ++   + G  F   E+E  SD    + D      E   D LD     +
Sbjct: 456  ARMLSPAPPPPLTNGTSTFGNRFYAGEYENESDGYFDEDDDEGGYYE---DHLD----LS 508

Query: 699  SDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVR 758
            SD P        PL+                      + EK   L ++         +VR
Sbjct: 509  SDKPQ-------PLK----------------------IYEKDMLLAMK---------EVR 530

Query: 759  PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
            P+AMREV LE P V+W D+GGQR +K +L +AVE P K+ E  K +      GIL++GPP
Sbjct: 531  PTAMREVFLETPSVRWSDIGGQRYIKNRLQKAVERPLKNPERMKNLNISGKKGILLYGPP 590

Query: 819  GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
            GCSKT+M +A+A+EAGLNFLAVKG E+ S +VGESEKA+R +F KARA +PSIIFFDEID
Sbjct: 591  GCSKTMMVKALATEAGLNFLAVKGAEMLSMYVGESEKAMREIFRKARAASPSIIFFDEID 650

Query: 879  GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDR 938
             +A+ R   S G      +++ LL E+DG+ +  NV V+AATN+P+ +DPAL+RPGR D 
Sbjct: 651  AIASRRDAGSHG---GINILTTLLNEMDGIEELKNVLVVAATNKPEILDPALMRPGRLDS 707

Query: 939  LLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE 998
            +LY+G P+   R+EIF   + +     +V+   LA +++G +GA++  IC  AA   ++E
Sbjct: 708  ILYIGLPDMEARKEIFENWIDRADVDDEVDALILASVTDGHSGAELVNICETAAELCLDE 767

Query: 999  NLDAS----RITMQHLKTAIRHV----QPSEIHSYKELSAKF 1032
              +      +I + H + ++  V    QP  I +Y+E S  F
Sbjct: 768  EEEKRMPNLQIQVHHFRASLEMVPKRTQPEVIQAYEEWSRSF 809


>gi|73984095|ref|XP_540960.2| PREDICTED: spermatogenesis-associated protein 5 [Canis lupus
            familiaris]
          Length = 893

 Score =  328 bits (841), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 150/291 (51%), Positives = 212/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 595  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 715  KARAVSPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P S+DVN+ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNDVNLDELIFQTDTYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ IT +H   A+  V P    S +    ++Q
Sbjct: 835  EIIAVCREAALLALEEDIQANSITRRHFTRALSTVTPRISKSLRRFYEEYQ 885



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/253 (44%), Positives = 161/253 (63%), Gaps = 20/253 (7%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           E ++ Q  V  D+  +GGLS +   +++II +         S G+ P +GVLL+GPPGTG
Sbjct: 342 EEEDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTG 399

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ 
Sbjct: 400 KTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALC 459

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREI 573
           P R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EI
Sbjct: 460 PKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEI 519

Query: 574 EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
           EI               VP+ A RL+IL  LL  + H L + E+  L+ + HG+VGADL 
Sbjct: 520 EI--------------GVPNAADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLK 565

Query: 634 ALCNEAALVCLRR 646
           ALCNEA L  LRR
Sbjct: 566 ALCNEAGLYALRR 578



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 149/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 467  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  L+++P   ++V + +LA  + G  GAD+  +C EA + A+   L+     
Sbjct: 527  ADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNKQPNL 586

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT+      +  ++PS + 
Sbjct: 587  SDSKMAGLVKITLNDFLQGMNDIRPSAMR 615



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 126/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E+F  
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRK 715

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   +P+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 716 ARAVSPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 775

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EIL+     M  S  D  
Sbjct: 776 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMPIS-NDVN 820

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L   T  + GA++ A+C EAAL+ L
Sbjct: 821 LDELIFQTDTYSGAEIIAVCREAALLAL 848


>gi|225555100|gb|EEH03393.1| cell division cycle protein [Ajellomyces capsulatus G186AR]
          Length = 753

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 226/649 (34%), Positives = 335/649 (51%), Gaps = 101/649 (15%)

Query: 382  AVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLG- 440
            ++ ++LR  TLP++ +    V  T       LGGL ++   + + +   + +    ++  
Sbjct: 186  SIGQALRRQTLPSSLV----VSPT------GLGGLGQQVMQINERLRDFTFQEHNVAMPS 235

Query: 441  -LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
              R + G+L++GP GTGK++L           + T+N   V+++N G+ E  L ++F  A
Sbjct: 236  FYRNSGGILIYGPKGTGKSTLLSKLGAAGWKKVLTINS-SVLNRNRGDGEVLLRKIFTEA 294

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
             QS P ++ ID+LD +AP  +     +   +   L +L D       VLV A T  P+ +
Sbjct: 295  LQSQPCLIAIDQLDYLAPKNRPNDSSICSALCEALDSLQDA-----KVLVAACTRHPNDV 349

Query: 560  EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY 619
            + +LR P R   EIE+               VP+   R EIL ++  G  +   D ++  
Sbjct: 350  DDSLRTPHRFGVEIEL--------------PVPTAKGREEILLSI-RGTSNVPNDHQLAK 394

Query: 620  LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDC 679
            L+  THG+VGADL +L     L C     K QT   +    G     E H   +      
Sbjct: 395  LAERTHGYVGADLFSLLQ---LSC----RKAQTRQILQLEQGKSCSNEQHISGL------ 441

Query: 680  SRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEK 739
                          A+P  S  P                  +NF                
Sbjct: 442  --------------ATPSESGAPD-----------------ENF---------------- 454

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
               L+++  D   A  + RP+AMREV LE PKVKW D+GG  E+K +L +AVE P K  +
Sbjct: 455  ---LQIDDTDISLALQETRPTAMREVFLETPKVKWSDIGGLHEIKERLRKAVERPLKFPD 511

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
              KR+      GIL++GPPGCSKTLM +A+A+EAGLNFLAVKG E+ S +VGESE+A+R 
Sbjct: 512  RMKRLNISGKKGILLYGPPGCSKTLMVKALATEAGLNFLAVKGAEILSMYVGESERALRE 571

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIA 918
            +F KAR+ +PSIIFFDEID +A+ RG  +         V++ LL E+DG+ +  NV V+A
Sbjct: 572  IFRKARSASPSIIFFDEIDAIASRRGSSAAQGGGGGINVLTTLLNEMDGIEELKNVLVVA 631

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEG 978
            ATN+P+ +DPAL+RPGR D +LY+GPP+   R+EI  I + K     DV+I  LA ++EG
Sbjct: 632  ATNKPEVLDPALMRPGRLDNILYIGPPDMQARKEILNIWISKSEVDDDVDIDMLAEVTEG 691

Query: 979  CTGADISLICREAAISAI---EENLDASRITMQHLKTAIRHVQPSEIHS 1024
             +GA++  IC  AA  A+   EE     RI  +H ++A+  V P +I S
Sbjct: 692  YSGAEMVNICETAADGALDEEEETGQQQRIGWRHFESALDQV-PRQISS 739


>gi|374327646|ref|YP_005085846.1| AAA ATPase [Pyrobaculum sp. 1860]
 gi|356642915|gb|AET33594.1| AAA family ATPase [Pyrobaculum sp. 1860]
          Length = 731

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 157/313 (50%), Positives = 218/313 (69%), Gaps = 1/313 (0%)

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
            ++L     +S +     +G+ D +      E    +K+ + DF  A  ++ PSA+RE+ +
Sbjct: 387  AALAREAAMSALRRAIQSGLIDLNQPSLPPEVFEKIKVTMADFTAALKEIIPSALREIHI 446

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            EVP V+WED+GG   VK +L EAVEWP K+ + FK+ G RPP G+L+FGPPG  KTL+A+
Sbjct: 447  EVPHVRWEDIGGLENVKQELREAVEWPLKYPDRFKKFGLRPPKGLLLFGPPGTGKTLLAK 506

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+G NF+AV+GPE+FSKWVGESEK VR +F KAR  AP ++F DEID LA  RG  
Sbjct: 507  AVATESGANFIAVRGPEIFSKWVGESEKMVREIFRKARMAAPCVVFIDEIDALATARGIG 566

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             D + VS+RV++QLL E+DG+    NV VIAATNRPD +DPALLRPGRFDR++YV PP+ 
Sbjct: 567  GDSL-VSERVVAQLLAEMDGIKALENVVVIAATNRPDLVDPALLRPGRFDRIIYVPPPDF 625

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITM 1007
              R EI  IH R  P + DV++ ELA  +EG +GAD+ L+ REA   A+ E+++A  ++M
Sbjct: 626  KARLEILLIHTRATPLAKDVDLEELARRTEGYSGADLELLVREATFLALREDINAKEVSM 685

Query: 1008 QHLKTAIRHVQPS 1020
            +H + A++ V+PS
Sbjct: 686  RHFEEALKKVRPS 698



 Score =  249 bits (636), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 125/277 (45%), Positives = 178/277 (64%), Gaps = 22/277 (7%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            +++P V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ GPPG  KTL+A
Sbjct: 171  VKIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLA 230

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 231  KAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKR-E 289

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRFDR +++ PP+
Sbjct: 290  EVTG-EVEKRVVAQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREIWINPPD 348

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
               R EI +IH R +P + DV++R+LA ++ G +GAD++ + REAA+SA+          
Sbjct: 349  FKGRYEILQIHTRNMPLAPDVDLRKLAEVTHGFSGADLAALAREAAMSALRRAIQSGLID 408

Query: 998  --------ENLDASRITMQHLKTAIRHVQPS---EIH 1023
                    E  +  ++TM     A++ + PS   EIH
Sbjct: 409  LNQPSLPPEVFEKIKVTMADFTAALKEIIPSALREIH 445



 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 102/211 (48%), Positives = 135/211 (63%), Gaps = 15/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 205 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 264

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 265 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVVVIGATNR 324

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREI I+               P    R EIL      M  +  D 
Sbjct: 325 PDAVDPALRRPGRFDREIWINP--------------PDFKGRYEILQIHTRNMPLA-PDV 369

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++  L+  THGF GADLAAL  EAA+  LRR
Sbjct: 370 DLRKLAEVTHGFSGADLAALAREAAMSALRR 400



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/215 (47%), Positives = 128/215 (59%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               GLRP KG+LL GPPGTGKT LA+  A +SG N   V GPE+ S+  GESE+ + E+
Sbjct: 480 FKKFGLRPPKGLLLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREI 539

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEEL-SQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +AP VVFIDE+DA+A AR  GG+ L S+R+VA LL  MDG+   + V+VIAATN
Sbjct: 540 FRKARMAAPCVVFIDEIDALATARGIGGDSLVSERVVAQLLAEMDGIKALENVVVIAATN 599

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEIL--HALLSGMEH 610
           RPD ++PAL RPGR DR I                 VP P    RLEIL  H   + +  
Sbjct: 600 RPDLVDPALLRPGRFDRII----------------YVPPPDFKARLEILLIHTRATPLAK 643

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D ++E L+  T G+ GADL  L  EA  + LR
Sbjct: 644 ---DVDLEELARRTEGYSGADLELLVREATFLALR 675


>gi|348511874|ref|XP_003443468.1| PREDICTED: spermatogenesis-associated protein 5-like [Oreochromis
            niloticus]
          Length = 900

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/283 (54%), Positives = 212/283 (74%), Gaps = 4/283 (1%)

Query: 747  LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
            L D + A   V+PSAMREV ++VPKV+W DVGG  EVK +L +AVEWP KH EAF R+G 
Sbjct: 605  LQDLQWAMSVVKPSAMREVAIDVPKVRWSDVGGMEEVKLKLKQAVEWPLKHPEAFTRMGI 664

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
            +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL SK+VGESE+AVR +F KARA
Sbjct: 665  QPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELLSKYVGESERAVREVFRKARA 724

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
             APSI+FFDEID LA+ RG  S    V DRV++QLL E+DG+ Q  +VTV+AATNRPD I
Sbjct: 725  VAPSIVFFDEIDALASERGSSSGSSGVGDRVLAQLLTEMDGIEQLRDVTVLAATNRPDMI 784

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            D AL+RPGR DR++YV  P+   R+EIF +  R +P + +V++  L   ++  +GA+I+ 
Sbjct: 785  DKALMRPGRLDRIVYVPLPDAPTRKEIFSLQFRNMPVAENVSLDHLVTRTDKYSGAEITA 844

Query: 987  ICREAAISAIEENLDASRITMQHLKTAIRHVQP----SEIHSY 1025
            +CREAA+ A++E++ A  I  +H ++A+  V+P    S I SY
Sbjct: 845  VCREAALLALQEDIKARHIEARHFESALNTVKPRIPDSVIQSY 887



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/240 (43%), Positives = 151/240 (62%), Gaps = 18/240 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGLS +  ++K+ I +        S+ G+ P +GVLL+GPPGTGKT + R  A + G
Sbjct: 358 SMIGGLSSQLDVIKETIELPLKHPELFSNYGIPPPRGVLLYGPPGTGKTMIGRAIASEVG 417

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            ++  +NGPE++S+ YGE+E  L ++F  ASQ  PA++FIDELDA+ P R+    E+ +R
Sbjct: 418 AHMTVINGPEIMSKFYGETEARLRQIFTEASQRQPAIIFIDELDALCPKREGAQNEVEKR 477

Query: 530 MVATLLNLMDGV---CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           +VA+LL LMDG+     +  +LV+ ATNRP +I+PALRRPGR D+E+E+           
Sbjct: 478 VVASLLTLMDGIGSEGHSGQLLVLGATNRPQAIDPALRRPGRFDKELEV----------- 526

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
               VP  A+R +IL   L  +  S  + E+  L+ A HG+VGADLAA+  EA L  LRR
Sbjct: 527 ---GVPGAAERADILQKQLKCVPCSATEEELTQLADAAHGYVGADLAAVGKEAGLHALRR 583



 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 151/270 (55%), Gaps = 19/270 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV +  +GG       + E +E P KH E F   G  PP G+L++GPPG  KT++ RA+A
Sbjct: 354  KVTYSMIGGLSSQLDVIKETIELPLKHPELFSNYGIPPPRGVLLYGPPGTGKTMIGRAIA 413

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE G +   + GPE+ SK+ GE+E  +R +F +A    P+IIF DE+D L   R  E   
Sbjct: 414  SEVGAHMTVINGPEIMSKFYGETEARLRQIFTEASQRQPAIIFIDELDALCPKR--EGAQ 471

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   + V+ ATNRP  IDPAL RPGRFD+ L VG P  
Sbjct: 472  NEVEKRVVASLLTLMDGIGSEGHSGQLLVLGATNRPQAIDPALRRPGRFDKELEVGVPGA 531

Query: 948  TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR-- 1004
             +R +I +  L+ +PCS ++  + +LA  + G  GAD++ + +EA + A+   L  S   
Sbjct: 532  AERADILQKQLKCVPCSATEEELTQLADAAHGYVGADLAAVGKEAGLHALRRALRGSHQP 591

Query: 1005 -----------ITMQHLKTAIRHVQPSEIH 1023
                       +T+Q L+ A+  V+PS + 
Sbjct: 592  PSDQQLMGTVTVTLQDLQWAMSVVKPSAMR 621



 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 125/215 (58%), Gaps = 23/215 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++S+  GESE+A+ EV
Sbjct: 659 FTRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELLSKYVGESERAVREV 718

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A   AP++VF DE+DA+A  R    G   +  R++A LL  MDG+ +   V V+AAT
Sbjct: 719 FRKARAVAPSIVFFDEIDALASERGSSSGSSGVGDRVLAQLLTEMDGIEQLRDVTVLAAT 778

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM---EH 610
           NRPD I+ AL RPGRLDR + + +              P    R EI       M   E+
Sbjct: 779 NRPDMIDKALMRPGRLDRIVYVPL--------------PDAPTRKEIFSLQFRNMPVAEN 824

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             LD    +L   T  + GA++ A+C EAAL+ L+
Sbjct: 825 VSLD----HLVTRTDKYSGAEITAVCREAALLALQ 855


>gi|290992238|ref|XP_002678741.1| predicted protein [Naegleria gruberi]
 gi|284092355|gb|EFC45997.1| predicted protein [Naegleria gruberi]
          Length = 677

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 160/301 (53%), Positives = 213/301 (70%), Gaps = 7/301 (2%)

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
            + E+   + L+   FE A + VRPSA+R +++EVPKV W+D+GGQ  VK  L E++EWP 
Sbjct: 375  LEEEQSMISLDYEFFENALVHVRPSAIRHILVEVPKVYWDDIGGQDNVKQALKESIEWPF 434

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            KH E FKR+  R P G+L++GPPGCSKTLMA+A+A+EA LNFLAV+GPELFSKWVGESE+
Sbjct: 435  KHSEHFKRMKIRAPRGVLLYGPPGCSKTLMAKALATEAKLNFLAVRGPELFSKWVGESER 494

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            AV+ +F+KAR  APSIIFFDEIDGL   RG  S G SV DRV+SQLL ELDG+     VT
Sbjct: 495  AVQQIFSKARQAAPSIIFFDEIDGLGVERG--SGGNSVGDRVLSQLLQELDGIDPLQGVT 552

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP-CSSDVNIRELAC 974
            VIAATNRPD +D ALLRPGR DR+LYV PP+E  R EI +I L+K+    S   + ++  
Sbjct: 553  VIAATNRPDLLDKALLRPGRIDRMLYVSPPDEAARREIVKIQLKKMANIVSPEEVEKIVQ 612

Query: 975  LSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP----SEIHSYKELSA 1030
             +   +GA+++ +CREAA  A++E++ A  +  +H + A++ V P      +  YKE + 
Sbjct: 613  STTNYSGAEMTALCREAAYIALQEDIHAQHVEFRHFEEAVKSVLPRITKDMLEFYKEFAN 672

Query: 1031 K 1031
            K
Sbjct: 673  K 673



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 83/207 (40%), Positives = 124/207 (59%), Gaps = 14/207 (6%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           + +R  +GVLL+GPPG  KT +A+  A ++ +N   V GPE+ S+  GESE+A+ ++F  
Sbjct: 443 MKIRAPRGVLLYGPPGCSKTLMAKALATEAKLNFLAVRGPELFSKWVGESERAVQQIFSK 502

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A Q+AP+++F DE+D +   R  GG  +  R+++ LL  +DG+    GV VIAATNRPD 
Sbjct: 503 ARQAAPSIIFFDEIDGLGVERGSGGNSVGDRVLSQLLQELDGIDPLQGVTVIAATNRPDL 562

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           ++ AL RPGR+DR           +L  SP   P  A R EI+   L  M + +   EVE
Sbjct: 563 LDKALLRPGRIDR-----------MLYVSP---PDEAARREIVKIQLKKMANIVSPEEVE 608

Query: 619 YLSMATHGFVGADLAALCNEAALVCLR 645
            +  +T  + GA++ ALC EAA + L+
Sbjct: 609 KIVQSTTNYSGAEMTALCREAAYIALQ 635



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 52/257 (20%)

Query: 414 GGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD------ 467
           GGL KEY  LK      ++K  +       + GVL+HG  G GK+ L      D      
Sbjct: 131 GGLQKEYEQLK-----KTLKQMIDLRENNVSAGVLIHGLSGVGKSLLVNTVLQDLFQESC 185

Query: 468 -------SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPA-------VVFIDELD 513
                     ++FT++     S+ YG++E  + + F + ++   +        + +++L+
Sbjct: 186 QQSNSEEEEPSIFTIHASMFSSKVYGQNEAKMKQFFQNPNEEGHSQLIYSYKFIILEDLE 245

Query: 514 AIAPARK---------DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
            +AP+ +          GG    +R+V+TLL+ +D  C    ++VI  TN+   I+ +++
Sbjct: 246 QLAPSNQVIQESSLMSKGG----KRLVSTLLHCLDD-CPKKRIIVIGITNQFSKIDSSIK 300

Query: 565 RPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT 624
           R GRLD+ +                 +P  A+RL IL  +         +  V  ++  T
Sbjct: 301 RSGRLDQTV-------------IECPIPGEAERLSILKCIFEQCSLVADEKVVNKVAAVT 347

Query: 625 HGFVGADLAALCNEAAL 641
           HGFVG+DL +LCNEA L
Sbjct: 348 HGFVGSDLKSLCNEAIL 364



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 34/245 (13%)

Query: 811  GILMFGPPGCSKTLMARAV-------------ASEAGLNFLAVKGPELFSKWVGESEKAV 857
            G+L+ G  G  K+L+   V             + E   +   +      SK  G++E  +
Sbjct: 158  GVLIHGLSGVGKSLLVNTVLQDLFQESCQQSNSEEEEPSIFTIHASMFSSKVYGQNEAKM 217

Query: 858  RSLFAKARANAPS-------IIFFDEIDGLAAIRG--KESDGVSVS-DRVMSQLLVELDG 907
            +  F        S        I  ++++ LA      +ES  +S    R++S LL  LD 
Sbjct: 218  KQFFQNPNEEGHSQLIYSYKFIILEDLEQLAPSNQVIQESSLMSKGGKRLVSTLLHCLDD 277

Query: 908  LHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGP-PNETDREEIFRIHLRKIPCSSD 966
              ++  + VI  TN+  KID ++ R GR D+ +   P P E +R  I +    +    +D
Sbjct: 278  CPKK-RIIVIGITNQFSKIDSSIKRSGRLDQTVIECPIPGEAERLSILKCIFEQCSLVAD 336

Query: 967  VN-IRELACLSEGCTGADISLICREAAIS--------AIEENLDASRITMQHLKTAIRHV 1017
               + ++A ++ G  G+D+  +C EA +         A+EE      +  +  + A+ HV
Sbjct: 337  EKVVNKVAAVTHGFVGSDLKSLCNEAILQYFMKTEPVALEEEQSMISLDYEFFENALVHV 396

Query: 1018 QPSEI 1022
            +PS I
Sbjct: 397  RPSAI 401


>gi|348582746|ref|XP_003477137.1| PREDICTED: spermatogenesis-associated protein 5 [Cavia porcellus]
          Length = 884

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 150/291 (51%), Positives = 209/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 586  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFS 645

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFL++KGPEL +K+VGESE+AVR +F 
Sbjct: 646  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLSIKGPELMNKYVGESERAVREIFR 705

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 706  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 765

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF +    +P S++VN+ EL   +   +GA
Sbjct: 766  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFNLQFNSMPISNEVNLDELILQTHTYSGA 825

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EEN+ A  I  +H   A+  V P    S +     +Q
Sbjct: 826  EIIAVCREAALLALEENIKAMCIMKKHFTQALSMVTPRIPESLRRFYEDYQ 876



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 154/243 (63%), Gaps = 18/243 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL+ +   ++++I +         S G+   +GVLL+GPPGTGKT +A+  A++ G  
Sbjct: 346 IGGLNSQLKAIREMIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIAKAIANEVGAY 405

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P R+    E+ +R+V
Sbjct: 406 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRIV 465

Query: 532 ATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           A+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI             
Sbjct: 466 ASLLTLMDGIGSEASEGQVLVLGATNRPHALDAALRRPGRFDKEIEI------------- 512

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
             VP+   RL+IL  LL  + H L  +E+  ++ + HG+VGADL ALCNEA L  LRR  
Sbjct: 513 -GVPNAQDRLDILQKLLRTVPHLLTKTELLQVANSAHGYVGADLKALCNEAGLCALRRVL 571

Query: 649 KIQ 651
           + Q
Sbjct: 572 RKQ 574



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 147/269 (54%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++A+A+A
Sbjct: 340  KVTYDMIGGLNSQLKAIREMIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIAKAIA 399

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 400  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 457

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  R+++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 458  NEVEKRIVASLLTLMDGIGSEASEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 517

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  LR +P   +   + ++A  + G  GAD+  +C EA + A+      + NL
Sbjct: 518  QDRLDILQKLLRTVPHLLTKTELLQVANSAHGYVGADLKALCNEAGLCALRRVLRKQPNL 577

Query: 1001 DASR------ITMQHLKTAIRHVQPSEIH 1023
              SR      IT+      +  ++PS + 
Sbjct: 578  PDSRVAGLVKITLNDFLQGMNDIRPSAMR 606



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 17/212 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + S +G++P KGVLL+GPPG  KT +A+  A++SG+N  ++ GPE++++  GESE+A+ E
Sbjct: 643 SFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLSIKGPELMNKYVGESERAVRE 702

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AA
Sbjct: 703 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAA 762

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EI +   + M  S 
Sbjct: 763 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFNLQFNSMPIS- 807

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            +  ++ L + TH + GA++ A+C EAAL+ L
Sbjct: 808 NEVNLDELILQTHTYSGAEIIAVCREAALLAL 839


>gi|126460718|ref|YP_001056996.1| ATPase AAA [Pyrobaculum calidifontis JCM 11548]
 gi|126250439|gb|ABO09530.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum calidifontis JCM
            11548]
          Length = 731

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 153/278 (55%), Positives = 206/278 (74%), Gaps = 1/278 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + DF  A  ++ PSA+REV +EVP+V+W+D+GG   VK +L EAVEWP K+ + FK
Sbjct: 422  IKVTMADFMGALREIIPSALREVHIEVPRVRWDDIGGLENVKQELREAVEWPLKYPDRFK 481

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            + G R P GIL+FGPPG  KTL+A+AVA+E+G NF+AV+GPE+FSKWVGESEK VR +F 
Sbjct: 482  KFGLRAPKGILLFGPPGTGKTLLAKAVATESGANFVAVRGPEIFSKWVGESEKMVREIFR 541

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID LA  RG   D + VS+RV++QLL E+DG+    NV VIAATNR
Sbjct: 542  KARMAAPAVIFIDEIDALATARGLGGDSL-VSERVVAQLLAEMDGIKALENVVVIAATNR 600

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R EI  IH R  P + DV++ E+A  +EG +GA
Sbjct: 601  PDLVDPALLRPGRFDRIIYVPPPDFKARLEILLIHTRATPLAKDVDLEEIARRTEGYSGA 660

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            D+ L+ REA   A+ EN+D   ++M+H + A++ V+PS
Sbjct: 661  DLELLVREATFLALRENIDTKEVSMRHFEEALKKVRPS 698



 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 176/277 (63%), Gaps = 22/277 (7%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            +++P V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ GPPG  KTL+A
Sbjct: 171  VKIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLA 230

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 231  KAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKR-E 289

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRFDR +++ PP+
Sbjct: 290  EVTG-EVEKRVVAQLLTLMDGLQERGQVIVIGATNRPDAVDPALRRPGRFDREIWINPPD 348

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
               R EI  IH R +P   DV++R+LA ++ G TGAD++ + REAA+SA+          
Sbjct: 349  FKGRYEILVIHTRNMPLGPDVDLRKLAEITHGFTGADLAALAREAAMSALRRAIQSGLID 408

Query: 998  --------ENLDASRITMQHLKTAIRHVQPS---EIH 1023
                    E  +  ++TM     A+R + PS   E+H
Sbjct: 409  LNQPSIPPEVFEKIKVTMADFMGALREIIPSALREVH 445



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/211 (48%), Positives = 134/211 (63%), Gaps = 15/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 205 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 264

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 265 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVIVIGATNR 324

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREI I+               P    R EIL      M     D 
Sbjct: 325 PDAVDPALRRPGRFDREIWINP--------------PDFKGRYEILVIHTRNMPLG-PDV 369

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++  L+  THGF GADLAAL  EAA+  LRR
Sbjct: 370 DLRKLAEITHGFTGADLAALAREAAMSALRR 400



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/215 (46%), Positives = 128/215 (59%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               GLR  KG+LL GPPGTGKT LA+  A +SG N   V GPE+ S+  GESE+ + E+
Sbjct: 480 FKKFGLRAPKGILLFGPPGTGKTLLAKAVATESGANFVAVRGPEIFSKWVGESEKMVREI 539

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEEL-SQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +APAV+FIDE+DA+A AR  GG+ L S+R+VA LL  MDG+   + V+VIAATN
Sbjct: 540 FRKARMAAPAVIFIDEIDALATARGLGGDSLVSERVVAQLLAEMDGIKALENVVVIAATN 599

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEIL--HALLSGMEH 610
           RPD ++PAL RPGR DR I                 VP P    RLEIL  H   + +  
Sbjct: 600 RPDLVDPALLRPGRFDRII----------------YVPPPDFKARLEILLIHTRATPLAK 643

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D ++E ++  T G+ GADL  L  EA  + LR
Sbjct: 644 ---DVDLEEIARRTEGYSGADLELLVREATFLALR 675


>gi|302349009|ref|YP_003816647.1| Cell division control protein 48, AAA family [Acidilobus
            saccharovorans 345-15]
 gi|302329421|gb|ADL19616.1| Cell division control protein 48, AAA family [Acidilobus
            saccharovorans 345-15]
          Length = 736

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 225/320 (70%), Gaps = 12/320 (3%)

Query: 730  SSGGMFMSEKGC-------ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQRE 782
            SSG + +S+ G         LK+    F +A   VRP+ +REV +EVP+V W+D+GG   
Sbjct: 417  SSGKVDLSKPGEIKKEILETLKVSRRHFLEAMKVVRPTLIREVFVEVPEVHWDDIGGLDN 476

Query: 783  VKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKG 842
            VK +L E VEWP KH + F+++G  PP G+L+FGPPG  KT++A+AVA+E+G NF+A++G
Sbjct: 477  VKQELREVVEWPLKHPDVFQKMGIEPPKGVLLFGPPGTGKTMLAKAVATESGANFIAIRG 536

Query: 843  PELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLL 902
            PE+ SKWVGESEKA+R  F +AR  AP ++FFDEID +A  RG   D   V+DR+++QLL
Sbjct: 537  PEVLSKWVGESEKAIRETFRRAREVAPVVVFFDEIDSIAPARGYSFDS-GVTDRIVNQLL 595

Query: 903  VELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP 962
             E+DG+    NV ++AATNRPD +DPALLRPGRFDR++YV PP+   R++IF++HLRK+P
Sbjct: 596  TEMDGIVPLSNVVILAATNRPDILDPALLRPGRFDRVIYVPPPDRESRKQIFKVHLRKVP 655

Query: 963  CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS-- 1020
             ++DV+I  LA L+EG TGADI+ + REA  + + E L+   +  +H + A++ V+PS  
Sbjct: 656  LANDVDIDRLADLTEGYTGADIAAVVREAVFAKLREKLEPGPVEWKHFEQALKRVKPSLS 715

Query: 1021 --EIHSYKELSAKFQRLVHS 1038
              ++  Y+++  + ++++ S
Sbjct: 716  REDVMRYEQMGDRLKKMIMS 735



 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 109/211 (51%), Positives = 150/211 (71%), Gaps = 2/211 (0%)

Query: 771 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
           +V WED+G   E K ++ E VE P KH E F+R+G  PP GIL++GPPG  KTL+A+A+A
Sbjct: 189 RVTWEDIGDLEEAKQRIREIVELPMKHPEIFQRLGIEPPKGILLYGPPGTGKTLLAKALA 248

Query: 831 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
           +E G  F+A+ GPE+ SK+ GESE+ +R +F +A+ NAPSIIF DEID +A  R +E  G
Sbjct: 249 NEIGAYFIAINGPEIMSKFYGESEERLREVFKEAQENAPSIIFIDEIDSIAPKR-EEVTG 307

Query: 891 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
             V  RV++QLL  +DG+ +R  V VI ATNRP+ +DPAL RPGRFDR + + PP++  R
Sbjct: 308 -EVEKRVVAQLLTLMDGIQERGKVIVIGATNRPEDLDPALRRPGRFDREIEIRPPDKQGR 366

Query: 951 EEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            EI ++H R +P  SDVN+ E+A L++G TG
Sbjct: 367 LEILQVHTRNMPLDSDVNLAEIADLTKGYTG 397



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 92/196 (46%), Positives = 123/196 (62%), Gaps = 19/196 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LA+  A++ G     +NGPE++S+ YGESE+ L EV
Sbjct: 219 FQRLGIEPPKGILLYGPPGTGKTLLAKALANEIGAYFIAINGPEIMSKFYGESEERLREV 278

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A ++AP+++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 279 FKEAQENAPSIIFIDEIDSIAPKREEVTGEVEKRVVAQLLTLMDGIQERGKVIVIGATNR 338

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P+ ++PALRRPGR DREIEI                P    RLEIL      M    LDS
Sbjct: 339 PEDLDPALRRPGRFDREIEI--------------RPPDKQGRLEILQVHTRNMP---LDS 381

Query: 616 EVEYLSMA--THGFVG 629
           +V    +A  T G+ G
Sbjct: 382 DVNLAEIADLTKGYTG 397



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 134/239 (56%), Gaps = 25/239 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++++            +G+ P KGVLL GPPGTGKT LA+  A +SG N
Sbjct: 471 IGGLDNVKQELREVVEWPLKHPDVFQKMGIEPPKGVLLFGPPGTGKTMLAKAVATESGAN 530

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK---DGGEELSQ 528
              + GPEV+S+  GESE+A+ E F  A + AP VVF DE+D+IAPAR    D G  ++ 
Sbjct: 531 FIAIRGPEVLSKWVGESEKAIRETFRRAREVAPVVVFFDEIDSIAPARGYSFDSG--VTD 588

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V  LL  MDG+     V+++AATNRPD ++PAL RPGR DR I               
Sbjct: 589 RIVNQLLTEMDGIVPLSNVVILAATNRPDILDPALLRPGRFDRVI--------------- 633

Query: 589 AAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             VP P +  R +I    L  +  +  D +++ L+  T G+ GAD+AA+  EA    LR
Sbjct: 634 -YVPPPDRESRKQIFKVHLRKVPLA-NDVDIDRLADLTEGYTGADIAAVVREAVFAKLR 690


>gi|126460414|ref|YP_001056692.1| ATPase AAA [Pyrobaculum calidifontis JCM 11548]
 gi|126250135|gb|ABO09226.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum calidifontis JCM
            11548]
          Length = 736

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 156/301 (51%), Positives = 213/301 (70%), Gaps = 7/301 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF  A   V P+ +REVI+EVP+V W+D+GG   +K +L E VEWP K++  F 
Sbjct: 433  LKVGMSDFLNAMKYVHPTVLREVIIEVPEVHWDDIGGYDSIKQELREIVEWPMKYRHYFD 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KTL A+AVA+E+G NF+AV+GPEL SKWVGESEKAVR +F 
Sbjct: 493  ELGVEPPKGILLFGPPGVGKTLFAKAVATESGANFIAVRGPELLSKWVGESEKAVREVFK 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP +IFFDEID +A  RG       V+DR+++QLL E+DG+    NV V+AATNR
Sbjct: 553  KARMAAPCVIFFDEIDSIAPARGTRLGDSGVTDRIVNQLLAEMDGIGTLKNVVVMAATNR 612

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R EIF++H +KI  + DVNI ELA  +EG TGA
Sbjct: 613  PDILDPALLRPGRFDRVIYVPPPDFKARVEIFKVHTKKIKLADDVNIEELAKRTEGYTGA 672

Query: 983  DISLICREAAISAIEENLDASR---ITMQHLKTAIRHVQPS----EIHSYKELSAKFQRL 1035
            DI+ + REAA+ A+ E +   +   ++M+H + A++ V PS    +I  Y+E++ + +R 
Sbjct: 673  DIAALVREAAMLALREVIREGKVKPVSMRHFEEALKRVPPSLTPEDIRRYEEMAKRVRRT 732

Query: 1036 V 1036
            +
Sbjct: 733  I 733



 Score =  235 bits (600), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 124/294 (42%), Positives = 180/294 (61%), Gaps = 32/294 (10%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VR   ++E  L +PKV WED+G   + K ++ E VE P +H E FK +G  PP GIL+ G
Sbjct: 159  VREEPVKEAELTIPKVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIG 218

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DE
Sbjct: 219  PPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDE 278

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRF
Sbjct: 279  IDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQVIVIGATNRPDAVDPALRRPGRF 336

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIP-CSS------------DVNIRELACLSEGCTGAD 983
            DR +++  P++  R EI  +H R +P C+             +V++ ++A ++ G TGAD
Sbjct: 337  DREIHIPMPDKRARREILAVHTRNMPLCTKADVESGVCKPGDEVDLDKIAEMTHGYTGAD 396

Query: 984  ISLICREAAISAI-----------------EENLDASRITMQHLKTAIRHVQPS 1020
            I+ + +EAA+SA+                 +E L   ++ M     A+++V P+
Sbjct: 397  IAALAKEAAMSALRRAIENRLINVDQDVIPQETLSKLKVGMSDFLNAMKYVHPT 450



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 138/218 (63%), Gaps = 16/218 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 203 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 262

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 263 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVIVIGATNR 322

Query: 556 PDSIEPALRRPGRLDREIEIDM-------SFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
           PD+++PALRRPGR DREI I M         L    +N P    +  +         SG+
Sbjct: 323 PDAVDPALRRPGRFDREIHIPMPDKRARREILAVHTRNMPLCTKADVE---------SGV 373

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                + +++ ++  THG+ GAD+AAL  EAA+  LRR
Sbjct: 374 CKPGDEVDLDKIAEMTHGYTGADIAALAKEAAMSALRR 411



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/250 (40%), Positives = 140/250 (56%), Gaps = 25/250 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG       L++I+      +     LG+ P KG+LL GPPG GKT  A+  A +SG N
Sbjct: 467 IGGYDSIKQELREIVEWPMKYRHYFDELGVEPPKGILLFGPPGVGKTLFAKAVATESGAN 526

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
              V GPE++S+  GESE+A+ EVF  A  +AP V+F DE+D+IAPAR  + G   ++ R
Sbjct: 527 FIAVRGPELLSKWVGESEKAVREVFKKARMAAPCVIFFDEIDSIAPARGTRLGDSGVTDR 586

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL  MDG+     V+V+AATNRPD ++PAL RPGR DR I                
Sbjct: 587 IVNQLLAEMDGIGTLKNVVVMAATNRPDILDPALLRPGRFDRVI---------------- 630

Query: 590 AVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR-- 645
            VP P    R+EI       ++ +  D  +E L+  T G+ GAD+AAL  EAA++ LR  
Sbjct: 631 YVPPPDFKARVEIFKVHTKKIKLA-DDVNIEELAKRTEGYTGADIAALVREAAMLALREV 689

Query: 646 -RYSKIQTSS 654
            R  K++  S
Sbjct: 690 IREGKVKPVS 699


>gi|119719222|ref|YP_919717.1| AAA family ATPase, CDC48 subfamily protein [Thermofilum pendens Hrk
            5]
 gi|119524342|gb|ABL77714.1| AAA family ATPase, CDC48 subfamily [Thermofilum pendens Hrk 5]
          Length = 732

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 151/278 (54%), Positives = 209/278 (75%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF  A  ++ PSA+RE+ +EVP V W+D+GG  +VK QL EAVEWP K+ E+F 
Sbjct: 424  IEVTMDDFMNAFREITPSALREIEVEVPAVHWDDIGGLEDVKQQLREAVEWPLKYPESFS 483

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP GIL++GPPG  KTL+A+AVA+E+  NF+++KGPE++SKWVGESE+A+R LF 
Sbjct: 484  RLGIDPPKGILLYGPPGTGKTLLAKAVATESEANFVSIKGPEVYSKWVGESERAIRELFR 543

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  APSIIF DEID LA +RG  +    V++RV+SQLL E+DGL +   V VIAATNR
Sbjct: 544  KARQVAPSIIFIDEIDALAPMRGLVTSDSGVTERVVSQLLTEMDGLERLEGVVVIAATNR 603

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+YV PP+E  R EI ++H R++P + DV++ E+A  +EG TGA
Sbjct: 604  PDIIDPALLRPGRFDRLIYVPPPDEKARLEILKVHTRRMPLAEDVDLAEIARKTEGYTGA 663

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            DI ++ REA + A+ EN+   ++  +H + A++ V+PS
Sbjct: 664  DIEVLVREAGLLALRENISIDKVYRRHFEEALKKVRPS 701



 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 121/272 (44%), Positives = 176/272 (64%), Gaps = 17/272 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            ++P+V ++D+G   E K ++ E VE P +H E FKR+G  PP GIL++GPPG  KTL+A+
Sbjct: 176  KIPRVTYDDIGDLEEAKQKIREMVELPLRHPELFKRLGIDPPKGILLYGPPGTGKTLLAK 235

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E    F+A+ GPE+ SK+ GESE+ +R +F +A+ +AP+IIF DEID +A  R +E
Sbjct: 236  AVANETDAYFIAINGPEIMSKFYGESEQRLREIFEEAKEHAPAIIFIDEIDAIAPKR-EE 294

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G  V  RV++QLL  +DGL  R +V VI ATNRP+ +DPAL RPGRFDR + +G P++
Sbjct: 295  VTG-EVEKRVVAQLLALMDGLEARGDVIVIGATNRPNALDPALRRPGRFDREIEIGIPDK 353

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R EIF++H R +P + DV++ +LA ++ G  GADI+ +CREAA+ A+           
Sbjct: 354  RGRLEIFKVHTRSMPLAKDVDLEKLAEITHGFVGADIAALCREAAMKALRRVLPKIDLEK 413

Query: 998  -----ENLDASRITMQHLKTAIRHVQPSEIHS 1024
                 E L+   +TM     A R + PS +  
Sbjct: 414  DEIPVEVLETIEVTMDDFMNAFREITPSALRE 445



 Score =  209 bits (532), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 108/221 (48%), Positives = 143/221 (64%), Gaps = 16/221 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LA+  A+++      +NGPE++S+ YGESEQ L E+
Sbjct: 209 FKRLGIDPPKGILLYGPPGTGKTLLAKAVANETDAYFIAINGPEIMSKFYGESEQRLREI 268

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 269 FEEAKEHAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLALMDGLEARGDVIVIGATNR 328

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREIEI               +P    RLEI       M  +  D 
Sbjct: 329 PNALDPALRRPGRFDREIEI--------------GIPDKRGRLEIFKVHTRSMPLA-KDV 373

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY-SKIQTSSD 655
           ++E L+  THGFVGAD+AALC EAA+  LRR   KI    D
Sbjct: 374 DLEKLAEITHGFVGADIAALCREAAMKALRRVLPKIDLEKD 414



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/218 (45%), Positives = 134/218 (61%), Gaps = 25/218 (11%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
            + S LG+ P KG+LL+GPPGTGKT LA+  A +S  N  ++ GPEV S+  GESE+A+ 
Sbjct: 480 ESFSRLGIDPPKGILLYGPPGTGKTLLAKAVATESEANFVSIKGPEVYSKWVGESERAIR 539

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLV 549
           E+F  A Q AP+++FIDE+DA+AP R     D G  +++R+V+ LL  MDG+ R +GV+V
Sbjct: 540 ELFRKARQVAPSIIFIDEIDALAPMRGLVTSDSG--VTERVVSQLLTEMDGLERLEGVVV 597

Query: 550 IAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSG 607
           IAATNRPD I+PAL RPGR DR I                 VP P +  RLEIL      
Sbjct: 598 IAATNRPDIIDPALLRPGRFDRLI----------------YVPPPDEKARLEILKVHTRR 641

Query: 608 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           M  +  D ++  ++  T G+ GAD+  L  EA L+ LR
Sbjct: 642 MPLA-EDVDLAEIARKTEGYTGADIEVLVREAGLLALR 678


>gi|11498895|ref|NP_070126.1| cell division protein CDC48 [Archaeoglobus fulgidus DSM 4304]
 gi|41688749|sp|O28972.1|Y1297_ARCFU RecName: Full=Cell division cycle protein 48 homolog AF_1297
 gi|2649281|gb|AAB89948.1| cell division control protein 48, AAA family (cdc48-1) [Archaeoglobus
            fulgidus DSM 4304]
          Length = 733

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 167/310 (53%), Positives = 215/310 (69%), Gaps = 18/310 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   + PSAMREV++EVP VKWED+GG    K +LMEAVEWP K+ E F+
Sbjct: 423  LKVTREDFMEALKNIEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFR 482

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
                +PP GIL+FGPPG  KTL+A+AVA+E+  NF++VKGPEL SKWVGESEK VR +F 
Sbjct: 483  AANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFR 542

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP +IFFDEID LA  RG   D   V++RV+SQLL ELDGL +  +V VIAATNR
Sbjct: 543  KARQVAPCVIFFDEIDSLAPRRGGIGDS-HVTERVVSQLLTELDGLEELKDVVVIAATNR 601

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGR +R +Y+ PP++  R EIF+IHLR  P + DVNI ELA  +EG +GA
Sbjct: 602  PDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGA 661

Query: 983  DISLICREAAISAI----------EENLDAS---RITMQHLKTAIRHVQPS----EIHSY 1025
            DI  +CREA + AI          EE  +A+   +IT +H + A++ V+PS    ++  Y
Sbjct: 662  DIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLTKEDVEKY 721

Query: 1026 KELSAKFQRL 1035
            ++L   F R+
Sbjct: 722  EKLIEDFHRM 731



 Score =  245 bits (626), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 126/281 (44%), Positives = 183/281 (65%), Gaps = 19/281 (6%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            +K +P+   EV   VP V +ED+GG +     + E +E P KH E F+R+G  PP G+L+
Sbjct: 164  LKEKPA--EEVKRAVPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLL 221

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+A+AVA+E   +F+ + GPE+ SK+ GESE+ +R +F +A+ NAPSIIF 
Sbjct: 222  YGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFI 281

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV++QLL  +DGL  R +V VIAATNRPD IDPAL RPG
Sbjct: 282  DEIDSIAPKR-EEVTG-EVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPG 339

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + +G P++  R+EI  IH RK+P + DV++ ELA L+ G  GAD+  +C+EAA+ 
Sbjct: 340  RFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMH 399

Query: 995  AIE---------------ENLDASRITMQHLKTAIRHVQPS 1020
            A+                E ++  ++T +    A+++++PS
Sbjct: 400  ALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALKNIEPS 440



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/235 (46%), Positives = 154/235 (65%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++   +
Sbjct: 184 IGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAH 243

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              ++GPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 244 FIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRVV 303

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATNRPD+I+PALRRPGR DREIEI               V
Sbjct: 304 AQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEI--------------GV 349

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL      M  +  D ++E L+  T+GFVGADL ALC EAA+  LRR
Sbjct: 350 PDKEGRKEILEIHTRKMPLA-EDVDLEELAELTNGFVGADLEALCKEAAMHALRR 403



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/210 (42%), Positives = 128/210 (60%), Gaps = 16/210 (7%)

Query: 441 LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSAS 500
           ++P +G+LL GPPGTGKT LA+  A++S  N  +V GPE++S+  GESE+ + E+F  A 
Sbjct: 486 IKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKAR 545

Query: 501 QSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
           Q AP V+F DE+D++AP R   G+  +++R+V+ LL  +DG+     V+VIAATNRPD I
Sbjct: 546 QVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMI 605

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY 619
           +PAL RPGRL+R I I                P    R+EI    L G   +  D  +E 
Sbjct: 606 DPALLRPGRLERHIYI--------------PPPDKKARVEIFKIHLRGKPLA-DDVNIEE 650

Query: 620 LSMATHGFVGADLAALCNEAALVCLRRYSK 649
           L+  T G+ GAD+ A+C EA ++ +R   K
Sbjct: 651 LAEKTEGYSGADIEAVCREAGMLAIRELIK 680


>gi|336477840|ref|YP_004616981.1| AAA ATPase [Methanosalsum zhilinae DSM 4017]
 gi|335931221|gb|AEH61762.1| AAA family ATPase, CDC48 subfamily [Methanosalsum zhilinae DSM 4017]
          Length = 740

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 151/290 (52%), Positives = 209/290 (72%), Gaps = 4/290 (1%)

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            +DFE A  ++ PSA+REV +EVP V W DVGG   VK +++E VEWP K  E F  +G +
Sbjct: 436  LDFENALKEIGPSALREVFVEVPTVSWTDVGGLDSVKQEIVETVEWPLKKPEKFVEMGIK 495

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
            PP GIL+FGPPG  KTL+A+AVA+E+  NF+++KGP++ SKWVGESEKA+R +F KAR  
Sbjct: 496  PPKGILLFGPPGTGKTLIAQAVANESNANFISIKGPQMLSKWVGESEKAIREMFKKARQV 555

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            +P IIFFDEID +AA+RG  ++G  V++RV++QLL ELDGL     + VIAATNRPD +D
Sbjct: 556  SPCIIFFDEIDSIAAVRGATTEGGKVAERVVNQLLTELDGLETLKEIVVIAATNRPDIMD 615

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLI 987
            PALLR GRFDR++ VG PN + R  IF+IH + IP   DVN+ ELA ++EG  GADI  +
Sbjct: 616  PALLRAGRFDRMVLVGAPNRSGRINIFKIHAKNIPLEDDVNLEELADMTEGYVGADIESV 675

Query: 988  CREAAISAIEENLDASRITMQHLKTAIRHVQP----SEIHSYKELSAKFQ 1033
            CREA + A+ E+    +I+M++ + A++ V+P    S I  Y+++  +F+
Sbjct: 676  CREAVMLALREDFGTRKISMKYFREALKKVRPTISESLIEYYQKIENQFK 725



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 112/266 (42%), Positives = 166/266 (62%), Gaps = 16/266 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG  +   ++ E +E P KH E F+R+   PP G++++GPPG  KTL+A+AVA 
Sbjct: 188  ITYEDIGGLGDEIQRVREMIELPMKHPELFQRLNIDPPKGVILYGPPGTGKTLIAKAVAG 247

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EAG NFL + GPE+  K+ GESE+ +R++F  A A+APSIIF DEID +A  R  E+   
Sbjct: 248  EAGANFLYIAGPEIMGKYYGESEERIRNIFEDATADAPSIIFIDEIDSIAPKR--ENVTG 305

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  LDG+ +R  V VI ATNR D IDPAL RPGRFDR + +G P+ + R 
Sbjct: 306  EVERRVVAQLLTMLDGMEERGQVIVIGATNRLDAIDPALRRPGRFDREIEIGVPDLSGRL 365

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI +IH R +P   DV++ ELA  ++G  GAD+  + +E+A+ ++               
Sbjct: 366  EILQIHTRGMPLDEDVDLDELAGNTQGFVGADMLALVQESAMKSLRRCLPDLDLDEEIPP 425

Query: 998  ENLDASRITMQHLKTAIRHVQPSEIH 1023
            E L+   ++    + A++ + PS + 
Sbjct: 426  ETLEKINVSALDFENALKEIGPSALR 451



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/237 (43%), Positives = 147/237 (62%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          L + P KGV+L+GPPGTGKT +A+  A ++G N
Sbjct: 193 IGGLGDEIQRVREMIELPMKHPELFQRLNIDPPKGVILYGPPGTGKTLIAKAVAGEAGAN 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              + GPE++ + YGESE+ +  +F+ A+  AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 253 FLYIAGPEIMGKYYGESEERIRNIFEDATADAPSIIFIDEIDSIAPKRENVTGEVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL ++DG+     V+VI ATNR D+I+PALRRPGR DREIEI               V
Sbjct: 313 AQLLTMLDGMEERGQVIVIGATNRLDAIDPALRRPGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
           P  + RLEIL     GM    LD +V+   +A  T GFVGAD+ AL  E+A+  LRR
Sbjct: 359 PDLSGRLEILQIHTRGMP---LDEDVDLDELAGNTQGFVGADMLALVQESAMKSLRR 412



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 132/212 (62%), Gaps = 23/212 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KG+LL GPPGTGKT +A+  A++S  N  ++ GP+++S+  GESE+A+ E+F  
Sbjct: 492 MGIKPPKGILLFGPPGTGKTLIAQAVANESNANFISIKGPQMLSKWVGESEKAIREMFKK 551

Query: 499 ASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q +P ++F DE+D+IA  R    +GG ++++R+V  LL  +DG+     ++VIAATNR
Sbjct: 552 ARQVSPCIIFFDEIDSIAAVRGATTEGG-KVAERVVNQLLTELDGLETLKEIVVIAATNR 610

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI--LHALLSGMEHSLL 613
           PD ++PAL R GR DR + +                P+ + R+ I  +HA    +E    
Sbjct: 611 PDIMDPALLRAGRFDRMVLV--------------GAPNRSGRINIFKIHAKNIPLED--- 653

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D  +E L+  T G+VGAD+ ++C EA ++ LR
Sbjct: 654 DVNLEELADMTEGYVGADIESVCREAVMLALR 685


>gi|325092198|gb|EGC45508.1| spermatogenesis associated 5 [Ajellomyces capsulatus H88]
          Length = 753

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 227/649 (34%), Positives = 339/649 (52%), Gaps = 101/649 (15%)

Query: 382  AVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLG- 440
            ++ ++LR  TLP++ +    V  T       LGGL ++   + + +   + +    ++  
Sbjct: 186  SIGQALRRQTLPSSLV----VSPT------GLGGLGQQVMQINERLRDFTFQEHNVAMPS 235

Query: 441  -LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
              R + G+L++GP GTGK++L           + T+N   V+++N G+ E  L ++F  A
Sbjct: 236  FYRNSGGILIYGPKGTGKSTLLSKLGAAGWKKVLTINS-SVLNRNRGDGEVLLRKIFTEA 294

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
             +S P ++ ID+LD +AP  +     +   +   L +L D       VLV A T  P+ +
Sbjct: 295  LRSQPCLIAIDQLDYLAPKNRPNDSSICSALCEALDSLQDA-----KVLVAACTRHPNDV 349

Query: 560  EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY 619
            + +LR P R   EIE+               VP+   R EIL ++  G  +   D ++  
Sbjct: 350  DDSLRTPHRFGVEIEL--------------PVPTAKGREEILLSI-RGTSNVPNDHQLAK 394

Query: 620  LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDC 679
            L+  THG+VGADL +L     L C     K QT          + + E       Q   C
Sbjct: 395  LAERTHGYVGADLFSLLQ---LSC----RKAQTRQ--------ILQLE-------QGKSC 432

Query: 680  SRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEK 739
            S     S +     A+P  S  P                  +NF                
Sbjct: 433  S-----SEQHISGLATPSESGAPD-----------------ENF---------------- 454

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
               L+++ +D   A  + RP+AMREV LE PKVKW D+GG  E+K +L +AVE P K  +
Sbjct: 455  ---LQIDDMDISLALQETRPTAMREVFLETPKVKWSDIGGLHEIKERLRKAVERPLKFPD 511

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
              KR+      GIL++GPPGCSKTLM +A+A+EAGLNFLAVKG E+ S +VGESE+A+R 
Sbjct: 512  RMKRLNISGKKGILLYGPPGCSKTLMVKALATEAGLNFLAVKGAEILSMYVGESERALRE 571

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIA 918
            +F KAR+ +PSIIFFDEID +A+ RG  +         V++ LL E+DG+ +  NV V+A
Sbjct: 572  IFRKARSASPSIIFFDEIDAIASRRGSSAAQGGGGGINVLTTLLNEMDGIEELKNVLVVA 631

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEG 978
            ATN+P+ +DPAL+RPGR D +LY+GPP+   R+EI  I + K     DV+I  LA ++EG
Sbjct: 632  ATNKPEVLDPALMRPGRLDNILYIGPPDVQARKEILNIWISKSEVDDDVDIDMLAEVTEG 691

Query: 979  CTGADISLICREAAISAI---EENLDASRITMQHLKTAIRHVQPSEIHS 1024
             +GA++  IC  AA  A+   EE     RI  +H ++A+  V P +I S
Sbjct: 692  YSGAEMVNICETAADGALDEEEETGQQQRIGRRHFESALDQV-PRQISS 739


>gi|332244516|ref|XP_003271419.1| PREDICTED: spermatogenesis-associated protein 5 [Nomascus leucogenys]
          Length = 874

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 150/291 (51%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   VK +L +AVEWP KH E+F 
Sbjct: 576  VKITLNDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFI 635

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 636  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 695

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 696  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 755

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 756  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 815

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  ICREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 816  EIVAICREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYENYQ 866



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/256 (39%), Positives = 149/256 (58%), Gaps = 39/256 (15%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGP+++S++                   P+++FIDE+DA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPDIISKH-------------------PSIIFIDEVDALCPK 442

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 443 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 502

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+   HG+VGADL  L
Sbjct: 503 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLASNAHGYVGADLKVL 548

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 549 CNEAGLCALRRILKKQ 564



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 637 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 696

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 697 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 756

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 757 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 801

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 802 LDELILQTDAYSGAEIVAICREAALLAL 829



 Score =  153 bits (386), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 37/269 (13%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GP++ SK                    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSVINGPDIISKH-------------------PSIIFIDEVDALCPKR--EGAQ 447

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 448  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 507

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 508  QDRLDILQKLLRRVPHLLTEAELLQLASNAHGYVGADLKVLCNEAGLCALRRILKKQPNL 567

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT+     A+  ++PS + 
Sbjct: 568  PDVKVAGLVKITLNDFLQAMNDIRPSAMR 596


>gi|302507514|ref|XP_003015718.1| hypothetical protein ARB_06029 [Arthroderma benhamiae CBS 112371]
 gi|291179286|gb|EFE35073.1| hypothetical protein ARB_06029 [Arthroderma benhamiae CBS 112371]
          Length = 817

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 220/636 (34%), Positives = 330/636 (51%), Gaps = 82/636 (12%)

Query: 413  LGGLSKEYAILKDIIISSSVKSTLSSLG--LRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
            LGGL+ + A++ + +   + +  +  +    + T G+L++G  GTGK+++       +  
Sbjct: 239  LGGLAPQLAVVNERLQDFNTQDQMIIMPSFYKSTGGILIYGAKGTGKSAMLAKIGEANWR 298

Query: 471  NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM 530
              F V    + S+  G+    L ++F  A +  P+++ ID+LD IAP R   G      +
Sbjct: 299  RTFNVTS-SITSRTGGDGAAVLRKIFSDALKYQPSLIKIDQLDFIAPKRSSTGPA-DVSL 356

Query: 531  VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
              TL  ++D + +   VLV+A T  P+ ++  LR P RL  EIE+               
Sbjct: 357  SPTLCEVLDSL-QDSKVLVVACTRHPNDVDDCLRTPHRLGIEIELQ-------------- 401

Query: 591  VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL----CNEAALVCLRR 646
            +P+   RLEIL AL  G      +  +E ++  THG+VGADL +L    C +A    L  
Sbjct: 402  IPTSKSRLEILQAL-RGSATQPTNRVLETIAAKTHGYVGADLLSLLQLSCRKAKARMLSP 460

Query: 647  YSKIQTSSDVLHSTGTLF--EFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTS 704
                  ++         +  E+E  SD    + D      E   D LD     +SD P  
Sbjct: 461  VPPPPPTNGTSTFRNRFYAGEYENESDGYFDEDDEEDGYYE---DHLD----LSSDQPR- 512

Query: 705  LLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMRE 764
                  PL+                      + EK   L +E         +VRP+AMRE
Sbjct: 513  ------PLK----------------------IYEKDMLLAME---------EVRPTAMRE 535

Query: 765  VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTL 824
            V LE P V+W D+GGQ  +K +L +AVE P K+ E  K +      GIL++GPPGCSKT+
Sbjct: 536  VFLETPSVRWSDIGGQGYIKDRLQKAVERPLKNPERMKNLNISGKRGILLYGPPGCSKTM 595

Query: 825  MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR 884
            M +A+A+EAGLNFLAVKG E+ S +VGESE+A+R +F KARA +PSIIFFDEID +AA R
Sbjct: 596  MVKALATEAGLNFLAVKGAEMLSMYVGESERAMREIFRKARAASPSIIFFDEIDAIAARR 655

Query: 885  GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
               S G      +++ LL E+DG+ +  NV V+AATN+P+ +DPAL+RPGR D +LY+G 
Sbjct: 656  DAGSHG---GINILTTLLNEMDGIEELKNVLVVAATNKPEILDPALMRPGRLDSILYIGL 712

Query: 945  PNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS- 1003
            P+   R+EIF   + +     +V+   LA +++G +GA++  IC  AA   ++E  +   
Sbjct: 713  PDMEARKEIFENWIERADVDDEVDAIILASMTDGHSGAELVNICETAAELCLDEEEEKRM 772

Query: 1004 ---RITMQH----LKTAIRHVQPSEIHSYKELSAKF 1032
               +I  QH    L+   R  QP  I +Y+E S  F
Sbjct: 773  PNLQIQPQHFLASLEMVPRRTQPEVIQAYEEWSRSF 808


>gi|374326849|ref|YP_005085049.1| AAA ATPase [Pyrobaculum sp. 1860]
 gi|356642118|gb|AET32797.1| AAA family ATPase, possible cell division control protein cdc48
            [Pyrobaculum sp. 1860]
          Length = 738

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 154/303 (50%), Positives = 213/303 (70%), Gaps = 9/303 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF  A   V P+ +REVI+EVP+V W+D+GG   +K +L E VEWP K++  F 
Sbjct: 433  LKVGMSDFMDAMKFVHPTVLREVIIEVPEVHWDDIGGYDAIKQELREIVEWPMKYKHYFD 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KTL A+AVA+E+G NF+AV+GPEL SKWVGESEKA+R +F 
Sbjct: 493  ELGVEPPKGILLFGPPGVGKTLFAKAVATESGANFIAVRGPELLSKWVGESEKAIREVFK 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP ++FFDEID +A  RG       V+DR+++QLL E+DG+    NV V+AATNR
Sbjct: 553  KARMAAPCVVFFDEIDSIAPARGSRLGDSGVTDRMVNQLLAEMDGIGTLKNVVVMAATNR 612

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R EIF++H +K+  + DVN+ ELA  +EG TGA
Sbjct: 613  PDILDPALLRPGRFDRVIYVPPPDAKARVEIFKVHTKKVKLADDVNLEELAKRTEGYTGA 672

Query: 983  DISLICREAAISAIEEN-----LDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            DI+ + REAA+ A+ E      L A  ++M+H + A++ + PS    +I  Y+E+S   +
Sbjct: 673  DIAALVREAAMLALRETIKEKALRAKPVSMKHFEEALKRIPPSLTPADIRRYEEMSKTLR 732

Query: 1034 RLV 1036
            R++
Sbjct: 733  RVI 735



 Score =  222 bits (566), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 116/266 (43%), Positives = 173/266 (65%), Gaps = 15/266 (5%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VR   ++E  L +P+V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ G
Sbjct: 159  VREEPVKEAELTIPRVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIG 218

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DE
Sbjct: 219  PPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDE 278

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRF
Sbjct: 279  IDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRF 336

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIP-CSS------------DVNIRELACLSEGCTGAD 983
            DR +++  P++  R EI  +H R +P C+             +V++ ++A ++ G TGAD
Sbjct: 337  DREIHIPMPDKRARREILAVHTRNMPLCTKADVEAKVCNPGDEVDLDKIAEMTHGYTGAD 396

Query: 984  ISLICREAAISAIEENLDASRITMQH 1009
            I+ + +EAA++++ + ++   I ++ 
Sbjct: 397  IAALAKEAAMASLRKAMNKGMINIEQ 422



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/223 (44%), Positives = 137/223 (61%), Gaps = 26/223 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 203 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 262

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 263 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVVVIGATNR 322

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM------- 608
           PD+++PALRRPGR DREI I M              P    R EIL      M       
Sbjct: 323 PDAVDPALRRPGRFDREIHIPM--------------PDKRARREILAVHTRNMPLCTKAD 368

Query: 609 -EHSLLDS----EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            E  + +     +++ ++  THG+ GAD+AAL  EAA+  LR+
Sbjct: 369 VEAKVCNPGDEVDLDKIAEMTHGYTGADIAALAKEAAMASLRK 411



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 135/240 (56%), Gaps = 18/240 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG       L++I+      K     LG+ P KG+LL GPPG GKT  A+  A +SG N
Sbjct: 467 IGGYDAIKQELREIVEWPMKYKHYFDELGVEPPKGILLFGPPGVGKTLFAKAVATESGAN 526

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
              V GPE++S+  GESE+A+ EVF  A  +AP VVF DE+D+IAPAR  + G   ++ R
Sbjct: 527 FIAVRGPELLSKWVGESEKAIREVFKKARMAAPCVVFFDEIDSIAPARGSRLGDSGVTDR 586

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           MV  LL  MDG+     V+V+AATNRPD ++PAL RPGR DR I +              
Sbjct: 587 MVNQLLAEMDGIGTLKNVVVMAATNRPDILDPALLRPGRFDRVIYV-------------- 632

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
             P    R+EI       ++ +  D  +E L+  T G+ GAD+AAL  EAA++ LR   K
Sbjct: 633 PPPDAKARVEIFKVHTKKVKLA-DDVNLEELAKRTEGYTGADIAALVREAAMLALRETIK 691


>gi|159041123|ref|YP_001540375.1| AAA ATPase [Caldivirga maquilingensis IC-167]
 gi|157919958|gb|ABW01385.1| AAA family ATPase, CDC48 subfamily [Caldivirga maquilingensis IC-167]
          Length = 735

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 155/303 (51%), Positives = 210/303 (69%), Gaps = 5/303 (1%)

Query: 735  FMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
            F  E    +K+ + DF  A  ++ PSA+RE+ +EVPKV+W DVGG  E K +L EAVEWP
Sbjct: 418  FTDENLSRIKVTMQDFMDAMREIIPSALREIYIEVPKVRWSDVGGLEEAKQELREAVEWP 477

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
             K+   FK +G RPP GIL+FGPPG  KTL+A+AVA+E+G NF+AV+GPE+ SKW GESE
Sbjct: 478  LKYPNRFKIMGIRPPKGILLFGPPGTGKTLLAKAVANESGANFIAVRGPEILSKWFGESE 537

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNV 914
            KA+R +F KAR  AP ++FFDEID +A  RG   D  S  DR+++QLL E+DG+    NV
Sbjct: 538  KAIREIFKKARMAAPCVVFFDEIDAIAPARGYTLD-TSAMDRIVAQLLAEMDGIAALENV 596

Query: 915  TVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC 974
             VI ATNRPD +DPALLRPGRFDR++YV PP++  R EI ++H R +P + DV++  LA 
Sbjct: 597  VVIGATNRPDMLDPALLRPGRFDRIIYVPPPDKPSRFEILKVHTRNVPLAKDVDLWRLAD 656

Query: 975  LSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ----PSEIHSYKELSA 1030
            L E  TGADI L+ REAA++A+ EN +A+ +TM+    A+  ++    P  I  Y+    
Sbjct: 657  LLEYYTGADIELLVREAALTALRENPNATEVTMEDFSKAMNKIRATLTPEMIKFYESWWD 716

Query: 1031 KFQ 1033
            +F+
Sbjct: 717  RFK 719



 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 124/276 (44%), Positives = 176/276 (63%), Gaps = 20/276 (7%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            + +P+V WED+G   E K ++ E VE P KH E F+ +G  PP G+L+ GPPG  KTL+A
Sbjct: 174  IRIPRVTWEDIGDLEEAKQKIRELVELPLKHPELFRHLGIEPPKGVLLIGPPGTGKTLLA 233

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA   F+++ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 234  KAVANEADAYFVSINGPEIVSKYYGESEARLREIFDEAKRNAPAIIFIDEIDSIAPKR-E 292

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  R+++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRFDR +++ PP+
Sbjct: 293  EVTG-EVEKRIVAQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREIWINPPD 351

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI---------- 996
               R EI  +H R +P   DV++R+LA ++ G TGADI+ + REAA+ A+          
Sbjct: 352  TRGRYEILLVHTRNMPLEKDVDLRKLAEITYGYTGADIAALAREAAMKALRRALQQGIIN 411

Query: 997  --------EENLDASRITMQHLKTAIRHVQPSEIHS 1024
                    +ENL   ++TMQ    A+R + PS +  
Sbjct: 412  PDDPNTFTDENLSRIKVTMQDFMDAMREIIPSALRE 447



 Score =  195 bits (495), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 135/208 (64%), Gaps = 15/208 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P KGVLL GPPGTGKT LA+  A+++     ++NGPE+VS+ YGESE  L E+FD 
Sbjct: 211 LGIEPPKGVLLIGPPGTGKTLLAKAVANEADAYFVSINGPEIVSKYYGESEARLREIFDE 270

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A ++APA++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNRPD+
Sbjct: 271 AKRNAPAIIFIDEIDSIAPKREEVTGEVEKRIVAQLLTLMDGLQERGQVVVIGATNRPDA 330

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           ++PALRRPGR DREI I+               P    R EIL      M     D ++ 
Sbjct: 331 VDPALRRPGRFDREIWIN--------------PPDTRGRYEILLVHTRNMPLE-KDVDLR 375

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRR 646
            L+  T+G+ GAD+AAL  EAA+  LRR
Sbjct: 376 KLAEITYGYTGADIAALAREAAMKALRR 403



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 136/243 (55%), Gaps = 29/243 (11%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL +    L++ +       +    +G+RP KG+LL GPPGTGKT LA+  A++SG
Sbjct: 458 SDVGGLEEAKQELREAVEWPLKYPNRFKIMGIRPPKGILLFGPPGTGKTLLAKAVANESG 517

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS-- 527
            N   V GPE++S+ +GESE+A+ E+F  A  +AP VVF DE+DAIAPAR   G  L   
Sbjct: 518 ANFIAVRGPEILSKWFGESEKAIREIFKKARMAAPCVVFFDEIDAIAPAR---GYTLDTS 574

Query: 528 --QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFS 582
              R+VA LL  MDG+   + V+VI ATNRPD ++PAL RPGR DR I +   D    F 
Sbjct: 575 AMDRIVAQLLAEMDGIAALENVVVIGATNRPDMLDPALLRPGRFDRIIYVPPPDKPSRFE 634

Query: 583 LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV 642
           +LK     VP           L   ++   L   +EY       + GAD+  L  EAAL 
Sbjct: 635 ILKVHTRNVP-----------LAKDVDLWRLADLLEY-------YTGADIELLVREAALT 676

Query: 643 CLR 645
            LR
Sbjct: 677 ALR 679


>gi|390332825|ref|XP_790164.2| PREDICTED: spermatogenesis-associated protein 5-like
            [Strongylocentrotus purpuratus]
          Length = 868

 Score =  327 bits (837), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 150/292 (51%), Positives = 211/292 (72%), Gaps = 2/292 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V+PSA+REV +++PKV W D+GGQ  +K +L +AVEWP KH EAF R+G  P
Sbjct: 576  DFLHAMAQVKPSALREVEIDIPKVYWSDIGGQESIKLKLRQAVEWPIKHPEAFARLGVSP 635

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPGCSKTL+A+A+A+E+GLNF++VKGPELFSKWVG+SE+AVR +F KAR+ A
Sbjct: 636  PRGVLLYGPPGCSKTLIAKALATESGLNFISVKGPELFSKWVGDSERAVREVFRKARSAA 695

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+FFDEIDG+A  RG  S   +V DR++ QLL ELDG+    +V V+AATNRPD ID 
Sbjct: 696  PAIVFFDEIDGIAVERGSSSGSSNVGDRLLGQLLTELDGVECLRDVVVVAATNRPDMIDK 755

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+RPGR DR+LYV  P++  R+EI  I  RK+P   D  +  L   ++G +GA++  +C
Sbjct: 756  ALMRPGRLDRILYVSLPDDHTRKEILNIQFRKMPIDGDCLLEMLVKQTQGYSGAEVVAVC 815

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR--LVHS 1038
            REAA+SA++E+LD   ++ +H   A+ +V+P            +Q+  ++HS
Sbjct: 816  REAALSAMQESLDIQSVSQRHFDQALANVKPQTTQESIRFYEGYQKNSVLHS 867



 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/311 (38%), Positives = 180/311 (57%), Gaps = 37/311 (11%)

Query: 351 SQPQVTE-SMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQD 409
           SQ Q  E ++D  S +  +  E+ VY       V+K+ R   L + Q E ++  +  +Q 
Sbjct: 265 SQKQSHEKTIDSLSRSQCVTEESGVY------RVTKTTRLEILTSEQEEKKS--SDEQQL 316

Query: 410 ISKLGG---------LSKEYAILKDIIISS-SVKSTLSSLGLRPTKGVLLHGPPGTGKTS 459
           I+KLGG         + ++   ++D+++         +SLG+ P +GVLL+GPPG GKT 
Sbjct: 317 ITKLGGRVTFDMIGGMERQLKAIRDVVMMPLKNPDIFASLGIPPPRGVLLYGPPGVGKTM 376

Query: 460 LARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR 519
           LAR  A +S V++  +N PEV+S+ YGESE  L  +FD A+Q+AP+++ IDELDA+ P R
Sbjct: 377 LARAVALESRVHIVVINMPEVLSKFYGESESRLRALFDEAAQNAPSLILIDELDALCPRR 436

Query: 520 KDGGEELSQRMVATLLNLMDGVCRTDG----VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           +    E  +R+V+ L++LMDG+ +       VLV+ AT RPDSI+ ALRRPGR D EIEI
Sbjct: 437 ERVNSESEKRVVSMLISLMDGMGQNTSSGRHVLVLGATARPDSIDTALRRPGRFDHEIEI 496

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+  +R +IL  L   + HSL   ++  +S + HG+VGADL A+
Sbjct: 497 --------------GVPNARERRQILEKLTGSISHSLTAEDLTLISDSAHGYVGADLTAV 542

Query: 636 CNEAALVCLRR 646
           C EAA+    R
Sbjct: 543 CKEAAMRTFER 553



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 158/294 (53%), Gaps = 26/294 (8%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++ +GG       + + V  P K+ + F  +G  PP G+L++GPPG  KT++ARAVA
Sbjct: 323  RVTFDMIGGMERQLKAIRDVVMMPLKNPDIFASLGIPPPRGVLLYGPPGVGKTMLARAVA 382

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
             E+ ++ + +  PE+ SK+ GESE  +R+LF +A  NAPS+I  DE+D L   R  E   
Sbjct: 383  LESRVHIVVINMPEVLSKFYGESESRLRALFDEAAQNAPSLILIDELDALCPRR--ERVN 440

Query: 891  VSVSDRVMSQLLVELDGLHQRV----NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
                 RV+S L+  +DG+ Q      +V V+ AT RPD ID AL RPGRFD  + +G PN
Sbjct: 441  SESEKRVVSMLISLMDGMGQNTSSGRHVLVLGATARPDSIDTALRRPGRFDHEIEIGVPN 500

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSE---GCTGADISLICREAAISAIE------ 997
              +R +I       I  S  +   +L  +S+   G  GAD++ +C+EAA+   E      
Sbjct: 501  ARERRQILEKLTGSI--SHSLTAEDLTLISDSAHGYVGADLTAVCKEAAMRTFERLRALT 558

Query: 998  -ENLDASRI-----TMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADES 1045
             E ++AS I     T +    A+  V+PS +   +E+     ++  S+    ES
Sbjct: 559  QEPMNASHIASGSVTKEDFLHAMAQVKPSAL---REVEIDIPKVYWSDIGGQES 609



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/222 (41%), Positives = 129/222 (58%), Gaps = 19/222 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG+ P +GVLL+GPPG  KT +A+  A +SG+N  +V GPE+ S+  G+SE+A+ EV
Sbjct: 628 FARLGVSPPRGVLLYGPPGCSKTLIAKALATESGLNFISVKGPELFSKWVGDSERAVREV 687

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGV-CRTDGVLVIAA 552
           F  A  +APA+VF DE+D IA  R    G   +  R++  LL  +DGV C  D V+V+AA
Sbjct: 688 FRKARSAAPAIVFFDEIDGIAVERGSSSGSSNVGDRLLGQLLTELDGVECLRD-VVVVAA 746

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +              ++P    R EIL+     M    
Sbjct: 747 TNRPDMIDKALMRPGRLDRILYV--------------SLPDDHTRKEILNIQFRKMPID- 791

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSS 654
            D  +E L   T G+ GA++ A+C EAAL  ++    IQ+ S
Sbjct: 792 GDCLLEMLVKQTQGYSGAEVVAVCREAALSAMQESLDIQSVS 833


>gi|322792852|gb|EFZ16685.1| hypothetical protein SINV_10130 [Solenopsis invicta]
          Length = 825

 Score =  326 bits (836), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 164/328 (50%), Positives = 215/328 (65%), Gaps = 35/328 (10%)

Query: 725  NGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVK 784
            N V        MS+    LK+ ++DF+ A    +PSAM+EV++EVP V+W D+GGQ ++K
Sbjct: 482  NAVKRHQKNEVMSDD--ELKVSMIDFQYALTITKPSAMKEVLVEVPNVRWSDIGGQEDLK 539

Query: 785  TQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVK--- 841
             +L +AVEWP KH EAF R+G  PP G+LMFGPPGCSKT++A+A+A+E+ +NFL +K   
Sbjct: 540  LKLKQAVEWPLKHPEAFVRLGITPPRGVLMFGPPGCSKTMIAKALATESKVNFLNIKVSH 599

Query: 842  ----------------GPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGL--AAI 883
                            GPELFSKWVGESEKAVR +F KAR  APSIIF DEID L     
Sbjct: 600  SIKSFISIVTSRDCLQGPELFSKWVGESEKAVREVFRKARQVAPSIIFIDEIDALGGERG 659

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP------------ALL 931
                 +G +V +RV++QLL ELDG+    +VT++AATNRPDKID             ALL
Sbjct: 660  SSSSGNGSNVQERVLAQLLTELDGVTTLGSVTLVAATNRPDKIDKVISHRIDRNIIIALL 719

Query: 932  RPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREA 991
            RPGR DR++YVG P+E  R EIF I LR +P + DVNI +L CL+EG TGA+I  IC EA
Sbjct: 720  RPGRLDRIIYVGLPDEETRREIFNIKLRNMPIAQDVNIEDLVCLTEGYTGAEIQAICHEA 779

Query: 992  AISAIEENLDASRITMQHLKTAIRHVQP 1019
            A+ A+E+N+DA+ +T +H   A   + P
Sbjct: 780  AMKALEKNIDATIVTKEHFIAAFTVIAP 807



 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 124/213 (58%), Gaps = 15/213 (7%)

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
           +KG+LL+GP G GK+ +A     +  V+ FTV   ++ S++ GE+E  L +VF  A  SA
Sbjct: 297 SKGILLYGPSGVGKSMIANAIISECNVSTFTVYSSDIYSKSVGETENNLKKVFSKAILSA 356

Query: 504 PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTD-GVLVIAATNRPDSIEPA 562
           P+++ ++++D++ P R     +  +R++  L+ L D +   +  VL++A T + D ++ +
Sbjct: 357 PSIILLEDVDSLCPRRSTSSTDHEKRVLNQLVTLFDDLQSINSNVLIVATTAKSDLVDSS 416

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM 622
           LRRPGRLD E EI               VP+P  R EIL  LLS + + L   +++ +S 
Sbjct: 417 LRRPGRLDMEFEI--------------YVPTPNMRTEILKKLLSKIPNELSCKDIQSISF 462

Query: 623 ATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
            THGFVGADL  LC+ A +  ++R+ K +  SD
Sbjct: 463 VTHGFVGADLYGLCSRAIINAVKRHQKNEVMSD 495



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 122/243 (50%), Gaps = 50/243 (20%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTV-------------------NGPE 479
           LG+ P +GVL+ GPPG  KT +A+  A +S VN   +                    GPE
Sbjct: 559 LGITPPRGVLMFGPPGCSKTMIAKALATESKVNFLNIKVSHSIKSFISIVTSRDCLQGPE 618

Query: 480 VVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAI----APARKDGGEELSQRMVATLL 535
           + S+  GESE+A+ EVF  A Q AP+++FIDE+DA+      +    G  + +R++A LL
Sbjct: 619 LFSKWVGESEKAVREVFRKARQVAPSIIFIDEIDALGGERGSSSSGNGSNVQERVLAQLL 678

Query: 536 NLMDGVCRTDGVLVIAATNRPDSIEP------------ALRRPGRLDREIEIDMSFLFSL 583
             +DGV     V ++AATNRPD I+             AL RPGRLDR I +        
Sbjct: 679 TELDGVTTLGSVTLVAATNRPDKIDKVISHRIDRNIIIALLRPGRLDRIIYV-------- 730

Query: 584 LKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
                  +P    R EI +  L  M  +  D  +E L   T G+ GA++ A+C+EAA+  
Sbjct: 731 ------GLPDEETRREIFNIKLRNMPIA-QDVNIEDLVCLTEGYTGAEIQAICHEAAMKA 783

Query: 644 LRR 646
           L +
Sbjct: 784 LEK 786



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 132/257 (51%), Gaps = 13/257 (5%)

Query: 773  KWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASE 832
            K ED+GG   + + + + V        + +        GIL++GP G  K+++A A+ SE
Sbjct: 263  KVEDIGGYGALISDIRDVVAIGIGRYRSIEHFDV--SKGILLYGPSGVGKSMIANAIISE 320

Query: 833  AGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS 892
              ++   V   +++SK VGE+E  ++ +F+KA  +APSII  +++D L   R   S    
Sbjct: 321  CNVSTFTVYSSDIYSKSVGETENNLKKVFSKAILSAPSIILLEDVDSLCPRRSTSS--TD 378

Query: 893  VSDRVMSQLLVELDGLHQ-RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
               RV++QL+   D L     NV ++A T + D +D +L RPGR D    +  P    R 
Sbjct: 379  HEKRVLNQLVTLFDDLQSINSNVLIVATTAKSDLVDSSLRRPGRLDMEFEIYVPTPNMRT 438

Query: 952  EIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL-------DAS 1003
            EI +  L KIP   S  +I+ ++ ++ G  GAD+  +C  A I+A++ +        D  
Sbjct: 439  EILKKLLSKIPNELSCKDIQSISFVTHGFVGADLYGLCSRAIINAVKRHQKNEVMSDDEL 498

Query: 1004 RITMQHLKTAIRHVQPS 1020
            +++M   + A+   +PS
Sbjct: 499  KVSMIDFQYALTITKPS 515


>gi|301123741|ref|XP_002909597.1| ATPase AFG2 protein [Phytophthora infestans T30-4]
 gi|262100359|gb|EEY58411.1| ATPase AFG2 protein [Phytophthora infestans T30-4]
          Length = 723

 Score =  326 bits (836), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 153/277 (55%), Positives = 203/277 (73%), Gaps = 1/277 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
             ++ L D + A   +RPSA+RE+ ++VP+V W D+GGQ  +K  L EAVEWP +H EAF 
Sbjct: 429  FEVTLSDLKLAMRGIRPSALREISVDVPRVLWSDIGGQDALKQALREAVEWPLQHPEAFT 488

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G RPP G+L++GPPGCSKTL A+A+A+E+G+NF+A+KGPELFSKWVGESE+ VR +F 
Sbjct: 489  RMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFIAIKGPELFSKWVGESEQQVREVFR 548

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +P+++FFDEID LA+ RG      S SDRV+SQLL ELDGL     V V+AATNR
Sbjct: 549  KARAASPTVVFFDEIDALASTRGAGGSS-SASDRVLSQLLTELDGLEPLKRVLVVAATNR 607

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPAL+RPGR DR LYV PP+   RE+I RIH RK P +SDV++ ELA  +   +GA
Sbjct: 608  PDLLDPALMRPGRIDRALYVSPPDVPAREQILRIHTRKTPLASDVSLTELAIATARFSGA 667

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            ++  +CREAA+ A+EE+  A  +  +H   A+  V P
Sbjct: 668  ELQALCREAALHAVEEDRVAVNVGKRHFVRALSVVTP 704



 Score =  216 bits (549), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 120/265 (45%), Positives = 163/265 (61%), Gaps = 18/265 (6%)

Query: 407 EQD-ISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
           EQD  + +GGL +E   +++++        T    GL   KGVLL GPPGTGKT +AR  
Sbjct: 180 EQDGFATIGGLQEELKAIREVVEQPLTNPETFERFGLPAPKGVLLFGPPGTGKTLIARAL 239

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE 524
           A +    +FT+NGPEVVS+  GESE  L  VF  A++ AP++V IDELDAI P R     
Sbjct: 240 ARELNARVFTINGPEVVSKFVGESEANLRAVFAQAAREAPSLVLIDELDAICPKRDSRVG 299

Query: 525 ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
           ++ +R+VATLL LMDG+  +  V+V+AATNRP++++PA+RRPGR DRE+EI         
Sbjct: 300 DMERRLVATLLTLMDGLSGSRQVVVLAATNRPNALDPAVRRPGRFDREVEI--------- 350

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 +P    RL IL   L  + H L  SE++ LS + HG+VGADL+ALC EAAL+ L
Sbjct: 351 -----GIPRANDRLAILRVALRRLPHKLTQSELQELSSSAHGYVGADLSALCKEAALLAL 405

Query: 645 RR--YSKIQTSSDVLHSTGTLFEFE 667
            R   S  Q +  +L +T +L  FE
Sbjct: 406 HRAFASNDQATGAILANTASLPPFE 430



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/281 (37%), Positives = 163/281 (58%), Gaps = 23/281 (8%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 836
            +GG +E    + E VE P  + E F+R G   P G+L+FGPPG  KTL+ARA+A E    
Sbjct: 187  IGGLQEELKAIREVVEQPLTNPETFERFGLPAPKGVLLFGPPGTGKTLIARALARELNAR 246

Query: 837  FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR 896
               + GPE+ SK+VGESE  +R++FA+A   APS++  DE+D +   R  +S    +  R
Sbjct: 247  VFTINGPEVVSKFVGESEANLRAVFAQAAREAPSLVLIDELDAICPKR--DSRVGDMERR 304

Query: 897  VMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRI 956
            +++ LL  +DGL     V V+AATNRP+ +DPA+ RPGRFDR + +G P   DR  I R+
Sbjct: 305  LVATLLTLMDGLSGSRQVVVLAATNRPNALDPAVRRPGRFDREVEIGIPRANDRLAILRV 364

Query: 957  HLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEE----------------- 998
             LR++P   +   ++EL+  + G  GAD+S +C+EAA+ A+                   
Sbjct: 365  ALRRLPHKLTQSELQELSSSAHGYVGADLSALCKEAALLALHRAFASNDQATGAILANTA 424

Query: 999  NLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSN 1039
            +L    +T+  LK A+R ++PS   + +E+S    R++ S+
Sbjct: 425  SLPPFEVTLSDLKLAMRGIRPS---ALREISVDVPRVLWSD 462



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/207 (44%), Positives = 125/207 (60%), Gaps = 16/207 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +G+RP KGVLL+GPPG  KT  A+  A +SG+N   + GPE+ S+  GESEQ + EV
Sbjct: 487 FTRMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFIAIKGPELFSKWVGESEQQVREV 546

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGG-EELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  ++P VVF DE+DA+A  R  GG    S R+++ LL  +DG+     VLV+AATN
Sbjct: 547 FRKARAASPTVVFFDEIDALASTRGAGGSSSASDRVLSQLLTELDGLEPLKRVLVVAATN 606

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD ++PAL RPGR+DR + +           SP  VP+  Q L I H   + +     D
Sbjct: 607 RPDLLDPALMRPGRIDRALYV-----------SPPDVPAREQILRI-HTRKTPLAS---D 651

Query: 615 SEVEYLSMATHGFVGADLAALCNEAAL 641
             +  L++AT  F GA+L ALC EAAL
Sbjct: 652 VSLTELAIATARFSGAELQALCREAAL 678


>gi|109075576|ref|XP_001104133.1| PREDICTED: spermatogenesis-associated protein 5-like isoform 3
            [Macaca mulatta]
 gi|355687589|gb|EHH26173.1| hypothetical protein EGK_16072 [Macaca mulatta]
          Length = 892

 Score =  326 bits (836), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 594  VKITLNDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 653

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP GIL++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 654  RMGIQPPKGILLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 713

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 714  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 773

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 774  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 833

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 834  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 884



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 160/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 343 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 400

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 401 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 460

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 461 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 520

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 521 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKIL 566

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 567 CNEAGLCALRRILKKQ 582



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 149/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 348  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 407

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 408  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 465

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 466  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 525

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 526  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKILCNEAGLCALRRILKKQPNL 585

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT+     A+  ++PS + 
Sbjct: 586  PDVKVAGLVKITLNDFLQAMNDIRPSAMR 614



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KG+LL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 655 MGIQPPKGILLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 714

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 715 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 774

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 775 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 819

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 820 LDELILQTDAYSGAEIVAVCREAALLAL 847


>gi|289192266|ref|YP_003458207.1| AAA family ATPase, CDC48 subfamily [Methanocaldococcus sp. FS406-22]
 gi|288938716|gb|ADC69471.1| AAA family ATPase, CDC48 subfamily [Methanocaldococcus sp. FS406-22]
          Length = 903

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 156/276 (56%), Positives = 208/276 (75%), Gaps = 1/276 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF++A   V PSAMREV++EVP VKWED+GG  EVK +L EAVEWP K +E F+
Sbjct: 420  LKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFE 479

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +IG RPP G+L+FGPPG  KTL+A+AVA+E+G NF++VKGPE+FSKWVGESEKA+R +F 
Sbjct: 480  KIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFR 539

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR +AP IIFFDEID +A  RG++    +V+D+V++QLL ELDG+ +  +V VIAATNR
Sbjct: 540  KARQSAPCIIFFDEIDAIAPKRGRDLSS-AVTDKVVNQLLTELDGMEEPKDVIVIAATNR 598

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGR DR++ V  P+E  R +IF+IH R +  + DV++ ELA  +EG TGA
Sbjct: 599  PDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRAMNLAEDVSLEELAKKTEGYTGA 658

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            DI  +CREAA+ A+ E++         L+  I ++Q
Sbjct: 659  DIEALCREAAMLAVRESIGKPWGIETALRDLINYLQ 694



 Score =  253 bits (646), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 127/292 (43%), Positives = 189/292 (64%), Gaps = 20/292 (6%)

Query: 745  LELVDFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            + + DF +  +K  P S ++E   ++P V +ED+GG +E   ++ E +E P +H E F++
Sbjct: 150  VRVTDFTQVELKEEPVSEIKET--KIPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEK 207

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+ +R +F +
Sbjct: 208  LGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEE 267

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            A  NAPSIIF DEID +A  R  E+ G  V  R+++QLL  +DGL  R  V VI ATNRP
Sbjct: 268  AEENAPSIIFIDEIDAIAPKR-DEATG-EVERRLVAQLLTLMDGLKGRGQVVVIGATNRP 325

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            + +DPAL RPGRFDR + +G P+   R+EI +IH R +P + DV++  LA ++ G  GAD
Sbjct: 326  NALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGAD 385

Query: 984  ISLICREAAISAI---------------EENLDASRITMQHLKTAIRHVQPS 1020
            ++ +C+EAA+ A+               +E LD  ++TM   K A++ V+PS
Sbjct: 386  LAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPS 437



 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 113/255 (44%), Positives = 161/255 (63%), Gaps = 19/255 (7%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P ++I+   +     +DI   GGL +E   ++++I +          LG+ P KGVLL G
Sbjct: 164 PVSEIKETKIPDVTYEDI---GGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVG 220

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A+++G N + +NGPE++S+  GE+E+ L ++F+ A ++AP+++FIDE
Sbjct: 221 PPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDE 280

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNRP++++PALRRPGR DR
Sbjct: 281 IDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDR 340

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
           EI I               VP    R EIL      M  +  D +++YL+  THGFVGAD
Sbjct: 341 EIVI--------------GVPDREGRKEILQIHTRNMPLA-EDVDLDYLADVTHGFVGAD 385

Query: 632 LAALCNEAALVCLRR 646
           LAALC EAA+  LRR
Sbjct: 386 LAALCKEAAMRALRR 400



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/214 (45%), Positives = 131/214 (61%), Gaps = 16/214 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K     +G+RP KGVLL GPPGTGKT LA+  A++SG N  +V GPE+ S+  GESE+A+
Sbjct: 475 KEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAI 534

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            E+F  A QSAP ++F DE+DAIAP R +D    ++ ++V  LL  +DG+     V+VIA
Sbjct: 535 REIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVIVIA 594

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLDR I +               VP    RL+I       M  +
Sbjct: 595 ATNRPDIIDPALLRPGRLDRVILV--------------PVPDEKARLDIFKIHTRAMNLA 640

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D  +E L+  T G+ GAD+ ALC EAA++ +R
Sbjct: 641 -EDVSLEELAKKTEGYTGADIEALCREAAMLAVR 673


>gi|385806208|ref|YP_005842606.1| AAA ATPase [Fervidicoccus fontis Kam940]
 gi|383796071|gb|AFH43154.1| AAA family ATPase, CDC48 subfamily [Fervidicoccus fontis Kam940]
          Length = 729

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 148/297 (49%), Positives = 211/297 (71%), Gaps = 4/297 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+   DF  A   V PS +RE+ +EVP VKW D+GG  E K QL EAVEWP K+ E ++
Sbjct: 431  VKVTWSDFMNALKDVNPSLIREIYVEVPNVKWSDIGGLEEAKQQLREAVEWPLKYPEIYE 490

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G RPP G+L+FGPPG  KT++A+AVA+E+  NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 491  KMGVRPPRGVLLFGPPGTGKTMLAKAVATESEANFIAVRGPEVLSKWVGESEKAIREIFR 550

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP++IFFDEID +   RG   D   V+DR+++QLL E+DG+    NV VI ATNR
Sbjct: 551  RARQVAPTVIFFDEIDSITPARGLRYDSSGVTDRIVNQLLTEIDGIQPLSNVVVIGATNR 610

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+Y+ PP++  R +I +IH RK+P +SDV++ +LA ++EG TGA
Sbjct: 611  PDILDPALLRPGRFDRLVYIPPPDKKSRLDILKIHTRKVPLASDVDLEKLADMTEGYTGA 670

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRL 1035
            D+  + REA + A+ E L+A  +  ++   A+  V PS    E+  Y+ L+ + +++
Sbjct: 671  DLEALVREAVMLALREKLEARPVEFKYFLKAMETVGPSLTREEVEKYERLAKQLKKM 727



 Score =  245 bits (626), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 113/244 (46%), Positives = 169/244 (69%), Gaps = 2/244 (0%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E++ E+PKV WED+G   E K +L E VE P +  + F+ +G  PP G+L++GPPG  KT
Sbjct: 178  EIVGEIPKVTWEDIGDLEEAKRRLREIVELPMRQPQLFRHLGIEPPKGVLLYGPPGTGKT 237

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+A+A+E G  F+A+ GPE+ SK+ GESE+ +R +F +A+ NAP+IIF DEID +A  
Sbjct: 238  LLAKALANEIGAYFVAINGPEIMSKFYGESEQRLREIFQQAQENAPAIIFIDEIDSIAPK 297

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRFDR + + 
Sbjct: 298  R-EEVTG-EVERRVVAQLLTLMDGLKERGRVVVIGATNRPDALDPALRRPGRFDREIEIA 355

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
            PP+   R+EI  +H R +P + DV++ +LA ++ G TGAD++ + +EAA++ I   ++  
Sbjct: 356  PPDVKARKEILMVHTRNVPLAEDVDLDKLAAITHGFTGADLAALVKEAAMNTIRRFIEEK 415

Query: 1004 RITM 1007
            ++ +
Sbjct: 416  KVDL 419



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/209 (49%), Positives = 139/209 (66%), Gaps = 15/209 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P KGVLL+GPPGTGKT LA+  A++ G     +NGPE++S+ YGESEQ L E+F  
Sbjct: 218 LGIEPPKGVLLYGPPGTGKTLLAKALANEIGAYFVAINGPEIMSKFYGESEQRLREIFQQ 277

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A ++APA++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNRPD+
Sbjct: 278 AQENAPAIIFIDEIDSIAPKREEVTGEVERRVVAQLLTLMDGLKERGRVVVIGATNRPDA 337

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           ++PALRRPGR DREIEI              A P    R EIL      +  +  D +++
Sbjct: 338 LDPALRRPGRFDREIEI--------------APPDVKARKEILMVHTRNVPLA-EDVDLD 382

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRRY 647
            L+  THGF GADLAAL  EAA+  +RR+
Sbjct: 383 KLAAITHGFTGADLAALVKEAAMNTIRRF 411



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 133/238 (55%), Gaps = 18/238 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL +    L++ +            +G+RP +GVLL GPPGTGKT LA+  A +S 
Sbjct: 463 SDIGGLEEAKQQLREAVEWPLKYPEIYEKMGVRPPRGVLLFGPPGTGKTMLAKAVATESE 522

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N   V GPEV+S+  GESE+A+ E+F  A Q AP V+F DE+D+I PAR  +     ++
Sbjct: 523 ANFIAVRGPEVLSKWVGESEKAIREIFRRARQVAPTVIFFDEIDSITPARGLRYDSSGVT 582

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            R+V  LL  +DG+     V+VI ATNRPD ++PAL RPGR DR + I            
Sbjct: 583 DRIVNQLLTEIDGIQPLSNVVVIGATNRPDILDPALLRPGRFDRLVYI------------ 630

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
               P    RL+IL      +  +  D ++E L+  T G+ GADL AL  EA ++ LR
Sbjct: 631 --PPPDKKSRLDILKIHTRKVPLA-SDVDLEKLADMTEGYTGADLEALVREAVMLALR 685


>gi|355749553|gb|EHH53952.1| hypothetical protein EGM_14670 [Macaca fascicularis]
          Length = 892

 Score =  326 bits (835), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 594  VKITLNDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 653

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP GIL++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 654  RMGIQPPKGILLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 713

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 714  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 773

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 774  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 833

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 834  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 884



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 160/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 343 QDNQFKVTYDM--IGGLSSQLKEIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 400

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 401 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 460

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 461 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 520

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 521 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKIL 566

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 567 CNEAGLCALRRILKKQ 582



 Score =  180 bits (457), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG      ++ E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 348  KVTYDMIGGLSSQLKEIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 407

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 408  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 465

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 466  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 525

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 526  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKILCNEAGLCALRRILKKQPNL 585

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT+     A+  ++PS + 
Sbjct: 586  PDVKVAGLVKITLNDFLQAMNDIRPSAMR 614



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KG+LL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 655 MGIQPPKGILLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 714

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 715 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 774

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 775 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 819

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 820 LDELILQTDAYSGAEIVAVCREAALLAL 847


>gi|157671927|ref|NP_660208.2| spermatogenesis-associated protein 5 [Homo sapiens]
 gi|308153554|sp|Q8NB90.3|SPAT5_HUMAN RecName: Full=Spermatogenesis-associated protein 5; AltName:
            Full=ATPase family protein 2 homolog; AltName:
            Full=Spermatogenesis-associated factor protein
 gi|119625621|gb|EAX05216.1| spermatogenesis associated 5, isoform CRA_d [Homo sapiens]
          Length = 893

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 595  VKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 835  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 885



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 160/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 522 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 568 CNEAGLCALRRILKKQ 583



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 467  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 527  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNL 586

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT++    A+  ++PS + 
Sbjct: 587  PDVKVAGLVKITLKDFLQAMNDIRPSAMR 615



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 715

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 775

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 776 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 820

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 821 LDELILQTDAYSGAEIVAVCREAALLAL 848


>gi|119625619|gb|EAX05214.1| spermatogenesis associated 5, isoform CRA_b [Homo sapiens]
          Length = 890

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 592  VKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 651

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 652  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 711

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 712  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 771

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 772  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 831

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 832  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 882



 Score =  209 bits (531), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/253 (43%), Positives = 157/253 (62%), Gaps = 17/253 (6%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
           R+    E+ +R+VA+LL LMDG+     VLV+ ATNRP +++ ALRRPGR D+EIEI   
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSVRQVLVLGATNRPHALDAALRRPGRFDKEIEI--- 518

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                       VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  LCNE
Sbjct: 519 -----------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNE 567

Query: 639 AALVCLRRYSKIQ 651
           A L  LRR  K Q
Sbjct: 568 AGLCALRRILKKQ 580



 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/266 (37%), Positives = 148/266 (55%), Gaps = 15/266 (5%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV++ LL  +DG+     V V+ ATNRP  +D AL RPGRFD+ + +G PN  DR
Sbjct: 467  NEVEKRVVASLLTLMDGIGSVRQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDR 526

Query: 951  EEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS------ 1003
             +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L         
Sbjct: 527  LDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDV 586

Query: 1004 ------RITMQHLKTAIRHVQPSEIH 1023
                  +IT++    A+  ++PS + 
Sbjct: 587  KVAGLVKITLKDFLQAMNDIRPSAMR 612



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 653 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 712

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 713 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 772

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 773 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 817

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 818 LDELILQTDAYSGAEIVAVCREAALLAL 845


>gi|397490957|ref|XP_003816447.1| PREDICTED: spermatogenesis-associated protein 5 isoform 1 [Pan
            paniscus]
          Length = 893

 Score =  325 bits (834), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 595  VKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 835  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 885



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 160/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 522 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 568 CNEAGLCALRRILKKQ 583



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 467  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 527  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNL 586

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT++    A+  ++PS + 
Sbjct: 587  PDVKVAGLVKITLKDFLQAMNDIRPSAMR 615



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 715

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 775

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 776 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 820

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 821 LDELILQTDAYSGAEIVAVCREAALLAL 848


>gi|117644704|emb|CAL37817.1| hypothetical protein [synthetic construct]
          Length = 893

 Score =  325 bits (834), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 595  VKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 835  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 885



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 160/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 522 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 568 CNEAGLCALRRILKKQ 583



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 467  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 527  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNL 586

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT++    A+  ++PS + 
Sbjct: 587  PDVKVAGLVKITLKDFLQAMNDIRPSAMR 615



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 715

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 775

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 776 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 820

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 821 LDELILQTDAYSGAEIVAVCREAALLAL 848


>gi|118090312|ref|XP_420619.2| PREDICTED: spermatogenesis-associated protein 5 [Gallus gallus]
          Length = 871

 Score =  325 bits (834), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 151/286 (52%), Positives = 210/286 (73%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +    VRPSAMREV ++VPKV W D+GG  +VK +L +AVEWP KH ++F R+G +P
Sbjct: 579  DFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQP 638

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPGCSKT++A+A+A E+GLNFLAVKGPEL +K+VGESE+AVR +F KAR  +
Sbjct: 639  PKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVS 698

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSI+FFDEID LA  RG  S   +V+DRV++QLL E+DG+ Q  +VT++AATNRPD ID 
Sbjct: 699  PSILFFDEIDALAVERGNSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDMIDK 758

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR++YV  P+   R EIFR+H R +P S ++ + EL   +   +GA+I+ +C
Sbjct: 759  ALLRPGRIDRIIYVPLPDAATRGEIFRLHFRSMPVSEEICLAELIQRTHKYSGAEITAVC 818

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            REAA+ A++E+++A  I  +H + A+  V P    S  +  A +Q+
Sbjct: 819  REAALLALQEDINAKCIMGRHFRDALTVVTPRIPDSLIQFYADYQQ 864



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/238 (44%), Positives = 155/238 (65%), Gaps = 18/238 (7%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS +   +++ +     ++ L  S G+ P +GVLL+GPPGTGKT +A+  A++ G +
Sbjct: 333 IGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAH 392

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           +  +NGPE++S+ YGESE  L ++F  AS   P+++FIDELDA+ P R+    E+ +R+V
Sbjct: 393 VTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREGAQNEVEKRVV 452

Query: 532 ATLLNLMDGVCR--TDGVLVI-AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           A+LL LMDG+    ++G LV+  ATNRP +++ ALRRPGR D+EIEI             
Sbjct: 453 ASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEI------------- 499

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             +P+   RL+IL  LL  + HSL  +E+  L+ + HG+VGADLAALC EA L  LRR
Sbjct: 500 -GIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYALRR 556



 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/257 (38%), Positives = 150/257 (58%), Gaps = 11/257 (4%)

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            ++F +ARM +   +        P+V ++ +GG       + E VE P K  E FK  G  
Sbjct: 309  INFIEARMNIAEDSDHG-----PQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGIS 363

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
            PP G+L++GPPG  KTL+A+A+A+E G +   + GPE+ SK+ GESE  +R +FA+A   
Sbjct: 364  PPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLR 423

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPD 924
             PSIIF DE+D L   R  E     V  RV++ LL  +DG+    +   + V+ ATNRP 
Sbjct: 424  RPSIIFIDELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPH 481

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGAD 983
             +D AL RPGRFD+ + +G PN  DR +I +  L+K+P S +   + +LA  + G  GAD
Sbjct: 482  ALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGAD 541

Query: 984  ISLICREAAISAIEENL 1000
            ++ +C+EA + A+   L
Sbjct: 542  LAALCKEAGLYALRRAL 558



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 17/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  AH+SG+N   V GPE++++  GESE+A+ E+F  
Sbjct: 634 MGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRK 693

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   +P+++F DE+DA+A  R +  G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 694 ARMVSPSILFFDEIDALAVERGNSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 753

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S     
Sbjct: 754 DMIDKALLRPGRIDRIIYVPL--------------PDAATRGEIFRLHFRSMPVSEEICL 799

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
            E +   TH + GA++ A+C EAAL+ L+
Sbjct: 800 AELIQR-THKYSGAEITAVCREAALLALQ 827


>gi|114595942|ref|XP_517427.2| PREDICTED: spermatogenesis-associated protein 5 isoform 2 [Pan
            troglodytes]
 gi|410265410|gb|JAA20671.1| spermatogenesis associated 5 [Pan troglodytes]
 gi|410303834|gb|JAA30517.1| spermatogenesis associated 5 [Pan troglodytes]
          Length = 893

 Score =  325 bits (834), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 595  VKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 835  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 885



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 160/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 522 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 568 CNEAGLCALRRILKKQ 583



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 467  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 527  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNL 586

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT++    A+  ++PS + 
Sbjct: 587  PDVKVAGLVKITLKDFLQAMNDIRPSAMR 615



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 715

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 775

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 776 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 820

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 821 LDELILQTDAYSGAEIVAVCREAALLAL 848


>gi|315426144|dbj|BAJ47789.1| AAA family ATPase [Candidatus Caldiarchaeum subterraneum]
 gi|343485004|dbj|BAJ50658.1| AAA family ATPase [Candidatus Caldiarchaeum subterraneum]
          Length = 726

 Score =  325 bits (834), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 145/279 (51%), Positives = 209/279 (74%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++ + DF  A  ++ PSA+REV +E P V+WED+GG  +VK +L+E VEWP K+ E F
Sbjct: 421  SLEVTMKDFLDAYKEITPSALREVEIETPTVRWEDIGGLEQVKQKLIEMVEWPLKYPEKF 480

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++G +PP G+L++GPPGC KTL+A+AVA+E+  NF+ +KGPE+FSKWVGESEKA+R +F
Sbjct: 481  EKLGIKPPRGVLLYGPPGCGKTLLAKAVATESEANFITIKGPEIFSKWVGESEKAIREIF 540

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR  AP++IFFDEI+ +A  +    D   V++RV SQLL E+DG+ +  ++ VI ATN
Sbjct: 541  RKARQAAPAVIFFDEIEAIAPRKDLAEDSSGVTNRVASQLLAEIDGIEELNDIVVIGATN 600

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD +DPALLRPGRFDRLL + PP+E  R EIF I+ RK+P + DVNI  LA   EG +G
Sbjct: 601  RPDMLDPALLRPGRFDRLLLIPPPDEKARAEIFYIYTRKMPLADDVNIEVLASRCEGYSG 660

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            ADI  +C+EAA++A+  +++A ++T +  + A+ +V+PS
Sbjct: 661  ADIESVCKEAALAALRRDINADKVTKRDFEEALMNVKPS 699



 Score =  233 bits (593), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 114/267 (42%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +E   ++ E +E P +  E F+++G  PP G+L++GPPGC KTL+A+AVA+
Sbjct: 178  ITYEDIGGLQEQIQRVREMIELPLRFPELFQKLGIDPPKGVLLYGPPGCGKTLLAKAVAT 237

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EA  NF+ + GPE+ +K+ GE+E  +R +F KA   APSIIF DEID +A  R + +   
Sbjct: 238  EAEANFILINGPEIMNKYYGETEARLREIFRKAEEEAPSIIFIDEIDAIAPKRSEVTG-- 295

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R +V VI ATNRP+ +DPAL RPGRFDR + +G P++  R 
Sbjct: 296  EVEKRVVAQLLALMDGLEGRGSVIVIGATNRPNALDPALRRPGRFDREIEIGIPDKKGRV 355

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI  IH R +P + DV + +L  ++ G TGAD++ +CREAA+ AI               
Sbjct: 356  EILTIHTRGMPLAKDVQVDKLGEMTRGYTGADLAALCREAAMKAIRRILPSIDFSSERIS 415

Query: 998  -ENLDASRITMQHLKTAIRHVQPSEIH 1023
             E L++  +TM+    A + + PS + 
Sbjct: 416  PEILNSLEVTMKDFLDAYKEITPSALR 442



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/293 (39%), Positives = 168/293 (57%), Gaps = 31/293 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL ++   ++++I +          LG+ P KGVLL+GPPG GKT LA+  A ++  N
Sbjct: 183 IGGLQEQIQRVREMIELPLRFPELFQKLGIDPPKGVLLYGPPGCGKTLLAKAVATEAEAN 242

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +NGPE++++ YGE+E  L E+F  A + AP+++FIDE+DAIAP R +   E+ +R+V
Sbjct: 243 FILINGPEIMNKYYGETEARLREIFRKAEEEAPSIIFIDEIDAIAPKRSEVTGEVEKRVV 302

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNRP++++PALRRPGR DREIEI               +
Sbjct: 303 AQLLALMDGLEGRGSVIVIGATNRPNALDPALRRPGRFDREIEI--------------GI 348

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR----- 646
           P    R+EIL     GM  +  D +V+ L   T G+ GADLAALC EAA+  +RR     
Sbjct: 349 PDKKGRVEILTIHTRGMPLA-KDVQVDKLGEMTRGYTGADLAALCREAAMKAIRRILPSI 407

Query: 647 -YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCT 698
            +S  + S ++L+S            TM    D  + IT S+   ++  +P  
Sbjct: 408 DFSSERISPEILNSLEV---------TMKDFLDAYKEITPSALREVEIETPTV 451



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 162/306 (52%), Gaps = 40/306 (13%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           D ++ER  P++  S++     F+  ++              +LRE  +    + ++++  
Sbjct: 408 DFSSERISPEILNSLEVTMKDFLDAYK---------EITPSALREVEIETPTVRWEDI-- 456

Query: 405 TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
                    GGL +    L +++            LG++P +GVLL+GPPG GKT LA+ 
Sbjct: 457 ---------GGLEQVKQKLIEMVEWPLKYPEKFEKLGIKPPRGVLLYGPPGCGKTLLAKA 507

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG 523
            A +S  N  T+ GPE+ S+  GESE+A+ E+F  A Q+APAV+F DE++AIAP RKD  
Sbjct: 508 VATESEANFITIKGPEIFSKWVGESEKAIREIFRKARQAAPAVIFFDEIEAIAP-RKDLA 566

Query: 524 EE---LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           E+   ++ R+ + LL  +DG+   + ++VI ATNRPD ++PAL RPGR DR         
Sbjct: 567 EDSSGVTNRVASQLLAEIDGIEELNDIVVIGATNRPDMLDPALLRPGRFDR--------- 617

Query: 581 FSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAA 640
             LL   P   P    R EI +     M  +  D  +E L+    G+ GAD+ ++C EAA
Sbjct: 618 --LLLIPP---PDEKARAEIFYIYTRKMPLA-DDVNIEVLASRCEGYSGADIESVCKEAA 671

Query: 641 LVCLRR 646
           L  LRR
Sbjct: 672 LAALRR 677


>gi|119872197|ref|YP_930204.1| ATPase AAA [Pyrobaculum islandicum DSM 4184]
 gi|119673605|gb|ABL87861.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum islandicum DSM 4184]
          Length = 731

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 156/313 (49%), Positives = 218/313 (69%), Gaps = 1/313 (0%)

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
            ++L     +S +     +G+ D +      E    +K+ + DF  A  ++ PSA+RE+ +
Sbjct: 387  AALAREAAMSALRRAIQSGLIDLNQPSIPPEALEKIKVTMSDFINAMKEIIPSALREIHI 446

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            EVP+V+WED+GG   VK +L EAVEWP K+ + FK+ G R P GIL+FGPPG  KTL+A+
Sbjct: 447  EVPRVRWEDIGGLENVKQELREAVEWPLKYPDKFKKFGLRAPKGILLFGPPGTGKTLLAK 506

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+G NF+AV+GPE+FSKWVGESEK VR +F KAR  AP++IF DE+D LA  RG  
Sbjct: 507  AVATESGANFIAVRGPEIFSKWVGESEKMVREIFRKARMAAPAVIFIDEVDALATARGLG 566

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             D + VS+RV++QLL E+DG+    NV VIAATNRPD IDPALLRPGRFDR++YV PP+ 
Sbjct: 567  GDSL-VSERVVAQLLAEMDGIKALENVVVIAATNRPDLIDPALLRPGRFDRIIYVPPPDF 625

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITM 1007
              R EI  IH +  P + DV++ ELA  +EG +GAD+ L+ REA   A+ E+++   ++M
Sbjct: 626  KARLEILLIHTKATPLAKDVDLEELARRTEGYSGADLELLVREATFLALREDINVREVSM 685

Query: 1008 QHLKTAIRHVQPS 1020
            +H + A++ V+PS
Sbjct: 686  RHFEEALKKVRPS 698



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 127/277 (45%), Positives = 177/277 (63%), Gaps = 22/277 (7%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            + +P V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ GPPG  KTL+A
Sbjct: 171  VRIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLA 230

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 231  KAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKR-E 289

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  RV++QLL  +DGL +R  V VI ATNRPD IDPAL RPGRFDR +++ PP+
Sbjct: 290  EVTG-EVEKRVVAQLLTLMDGLQERGQVIVIGATNRPDAIDPALRRPGRFDREIWINPPD 348

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
               R EI  IH R +P + DV++R+LA ++ G +GAD++ + REAA+SA+          
Sbjct: 349  FKGRYEILLIHTRNMPLAPDVDLRKLAEMTHGFSGADLAALAREAAMSALRRAIQSGLID 408

Query: 998  --------ENLDASRITMQHLKTAIRHVQPS---EIH 1023
                    E L+  ++TM     A++ + PS   EIH
Sbjct: 409  LNQPSIPPEALEKIKVTMSDFINAMKEIIPSALREIH 445



 Score =  196 bits (497), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 103/211 (48%), Positives = 135/211 (63%), Gaps = 15/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 205 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 264

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 265 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVIVIGATNR 324

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+I+PALRRPGR DREI I+               P    R EIL      M  +  D 
Sbjct: 325 PDAIDPALRRPGRFDREIWINP--------------PDFKGRYEILLIHTRNMPLA-PDV 369

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++  L+  THGF GADLAAL  EAA+  LRR
Sbjct: 370 DLRKLAEMTHGFSGADLAALAREAAMSALRR 400



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/215 (47%), Positives = 128/215 (59%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               GLR  KG+LL GPPGTGKT LA+  A +SG N   V GPE+ S+  GESE+ + E+
Sbjct: 480 FKKFGLRAPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREI 539

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEEL-SQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +APAV+FIDE+DA+A AR  GG+ L S+R+VA LL  MDG+   + V+VIAATN
Sbjct: 540 FRKARMAAPAVIFIDEVDALATARGLGGDSLVSERVVAQLLAEMDGIKALENVVVIAATN 599

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEIL--HALLSGMEH 610
           RPD I+PAL RPGR DR I                 VP P    RLEIL  H   + +  
Sbjct: 600 RPDLIDPALLRPGRFDRII----------------YVPPPDFKARLEILLIHTKATPLAK 643

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D ++E L+  T G+ GADL  L  EA  + LR
Sbjct: 644 ---DVDLEELARRTEGYSGADLELLVREATFLALR 675


>gi|426345425|ref|XP_004040415.1| PREDICTED: spermatogenesis-associated protein 5 [Gorilla gorilla
            gorilla]
          Length = 825

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 527  VKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 586

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 587  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 646

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 647  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 706

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 707  PDRIDKALMRPGRLDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDTYSGA 766

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 767  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 817



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 588 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 647

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 648 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 707

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGRLDR I + +              P  A R EI       M  S  + +
Sbjct: 708 DRIDKALMRPGRLDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 752

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 753 LDELILQTDTYSGAEIVAVCREAALLAL 780



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 15/127 (11%)

Query: 526 LSQRMVATLLNLMDGVCRTDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
           L Q +    ++ +D    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI         
Sbjct: 403 LEQYLGVIFMSQVDSQEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI--------- 453

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  LCNEA L  L
Sbjct: 454 -----GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCAL 508

Query: 645 RRYSKIQ 651
           RR  K Q
Sbjct: 509 RRILKKQ 515



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 13/124 (10%)

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP-CSSDVNIRE 971
             V V+ ATNRP  +D AL RPGRFD+ + +G PN  DR +I +  LR++P   ++  + +
Sbjct: 424  QVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQ 483

Query: 972  LACLSEGCTGADISLICREAAISAIEENLDAS------------RITMQHLKTAIRHVQP 1019
            LA  + G  GAD+ ++C EA + A+   L               +IT++    A+  ++P
Sbjct: 484  LANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKLAGLVKITLKDFLQAMNDIRP 543

Query: 1020 SEIH 1023
            S + 
Sbjct: 544  SAMR 547


>gi|254553470|ref|NP_001156983.1| spermatogenesis-associated protein 5 isoform 1 [Mus musculus]
 gi|187611511|sp|Q3UMC0.2|SPAT5_MOUSE RecName: Full=Spermatogenesis-associated protein 5; AltName:
            Full=Spermatogenesis-associated factor protein
 gi|12847023|dbj|BAB27406.1| unnamed protein product [Mus musculus]
          Length = 893

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 209/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH ++F 
Sbjct: 595  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFN 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVTV+AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +C+EAA+ A+EEN+ A  I  +H   A+  V P    S +     +Q
Sbjct: 835  EIIAVCKEAALLALEENIKADCIMKRHFTQALSIVTPRIPESLRRFYEDYQ 885



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 159/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+   +G+LL+GPPGTGKT
Sbjct: 344 QDSQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          +P+   RL+IL  LL  + H L  +E+  L+   HG+VGADL AL
Sbjct: 522 --------------GIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKAL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 568 CNEAGLHALRRVLRKQ 583



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 20/270 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESD 889
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R G +S+
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 468

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN
Sbjct: 469  ---VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525

Query: 947  ETDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EEN 999
              DR +I +  LR++P   +   +  LA  + G  GAD+  +C EA + A+      + N
Sbjct: 526  AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPN 585

Query: 1000 LDAS------RITMQHLKTAIRHVQPSEIH 1023
            L  S      +IT+      +  ++PS + 
Sbjct: 586  LPDSKVAGMVKITLNDFLQGMNDIRPSAMR 615



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 17/212 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 652 SFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 711

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+AA
Sbjct: 712 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAA 771

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M  S 
Sbjct: 772 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMPIS- 816

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            + +++ L + T  + GA++ A+C EAAL+ L
Sbjct: 817 NEVDLDELVLQTDTYSGAEIIAVCKEAALLAL 848


>gi|74201504|dbj|BAE26178.1| unnamed protein product [Mus musculus]
          Length = 893

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 209/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH ++F 
Sbjct: 595  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFN 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVTV+AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +C+EAA+ A+EEN+ A  I  +H   A+  V P    S +     +Q
Sbjct: 835  EIIAVCKEAALLALEENIKADCIMKRHFTQALSIVTPRIPESLRRFYEDYQ 885



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 159/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+   +G+LL+GPPGTGKT
Sbjct: 344 QDSQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          +P+   RL+IL  LL  + H L  +E+  L+   HG+VGADL AL
Sbjct: 522 --------------GIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKAL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 568 CNEAGLHALRRVLRKQ 583



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 20/270 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESD 889
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R G +S+
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 468

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN
Sbjct: 469  ---VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525

Query: 947  ETDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EEN 999
              DR +I +  LR++P   +   +  LA  + G  GAD+  +C EA + A+      + N
Sbjct: 526  AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPN 585

Query: 1000 LDAS------RITMQHLKTAIRHVQPSEIH 1023
            L  S      +IT+      +  ++PS + 
Sbjct: 586  LPDSKVAGMVKITLNDFLQGMNDIRPSAMR 615



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 17/212 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 652 SFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 711

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+AA
Sbjct: 712 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAA 771

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M  S 
Sbjct: 772 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMPIS- 816

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            + +++ L + T  + GA++ A+C EAAL+ L
Sbjct: 817 NEVDLDELVLQTDTYSGAEIIAVCKEAALLAL 848


>gi|254553468|ref|NP_067318.2| spermatogenesis-associated protein 5 isoform 2 [Mus musculus]
          Length = 892

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 209/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH ++F 
Sbjct: 594  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFN 653

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 654  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 713

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVTV+AATNR
Sbjct: 714  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 773

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P S++V++ EL   ++  +GA
Sbjct: 774  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGA 833

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +C+EAA+ A+EEN+ A  I  +H   A+  V P    S +     +Q
Sbjct: 834  EIIAVCKEAALLALEENIKADCIMKRHFTQALSIVTPRIPESLRRFYEDYQ 884



 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 159/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+   +G+LL+GPPGTGKT
Sbjct: 343 QDSQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 400

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 401 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 460

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 461 REGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 520

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          +P+   RL+IL  LL  + H L  +E+  L+   HG+VGADL AL
Sbjct: 521 --------------GIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKAL 566

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 567 CNEAGLHALRRVLRKQ 582



 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 20/270 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 348  KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 407

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESD 889
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R G +S+
Sbjct: 408  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 467

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN
Sbjct: 468  ---VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 524

Query: 947  ETDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EEN 999
              DR +I +  LR++P   +   +  LA  + G  GAD+  +C EA + A+      + N
Sbjct: 525  AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPN 584

Query: 1000 LDAS------RITMQHLKTAIRHVQPSEIH 1023
            L  S      +IT+      +  ++PS + 
Sbjct: 585  LPDSKVAGMVKITLNDFLQGMNDIRPSAMR 614



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 17/212 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 651 SFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 710

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+AA
Sbjct: 711 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAA 770

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M  S 
Sbjct: 771 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMPIS- 815

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            + +++ L + T  + GA++ A+C EAAL+ L
Sbjct: 816 NEVDLDELVLQTDTYSGAEIIAVCKEAALLAL 847


>gi|119625618|gb|EAX05213.1| spermatogenesis associated 5, isoform CRA_a [Homo sapiens]
          Length = 856

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 558  VKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 617

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 618  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 677

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 678  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 737

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 738  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 797

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 798  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 848



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 160/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 307 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 364

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 365 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 424

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 425 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 484

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 485 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVL 530

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 531 CNEAGLCALRRILKKQ 546



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 312  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 371

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 372  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 429

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 430  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 489

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 490  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNL 549

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT++    A+  ++PS + 
Sbjct: 550  PDVKVAGLVKITLKDFLQAMNDIRPSAMR 578



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 619 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 678

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 679 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 738

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 739 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 783

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 784 LDELILQTDAYSGAEIVAVCREAALLAL 811


>gi|148703168|gb|EDL35115.1| spermatogenesis associated 5, isoform CRA_a [Mus musculus]
          Length = 893

 Score =  325 bits (833), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 209/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH ++F 
Sbjct: 595  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFN 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVTV+AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +C+EAA+ A+EEN+ A  I  +H   A+  V P    S +     +Q
Sbjct: 835  EIIAVCKEAALLALEENIKADCIMKRHFTEALSIVTPRIPESLRRFYEDYQ 885



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 159/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+   +G+LL+GPPGTGKT
Sbjct: 344 QDSQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          +P+   RL+IL  LL  + H L  +E+  L+   HG+VGADL AL
Sbjct: 522 --------------GIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKAL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 568 CNEAGLHALRRVLRKQ 583



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 20/270 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESD 889
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R G +S+
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 468

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN
Sbjct: 469  ---VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525

Query: 947  ETDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EEN 999
              DR +I +  LR++P   +   +  LA  + G  GAD+  +C EA + A+      + N
Sbjct: 526  AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPN 585

Query: 1000 LDAS------RITMQHLKTAIRHVQPSEIH 1023
            L  S      +IT+      +  ++PS + 
Sbjct: 586  LPDSKVAGMVKITLNDFLQGMNDIRPSAMR 615



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 17/212 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 652 SFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 711

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+AA
Sbjct: 712 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAA 771

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M  S 
Sbjct: 772 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMPIS- 816

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            + +++ L + T  + GA++ A+C EAAL+ L
Sbjct: 817 NEVDLDELVLQTDTYSGAEIIAVCKEAALLAL 848


>gi|4105619|gb|AAD02481.1| SPAF [Mus musculus]
          Length = 892

 Score =  325 bits (833), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 209/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH ++F 
Sbjct: 594  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFN 653

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 654  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 713

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVTV+AATNR
Sbjct: 714  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 773

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P S++V++ EL   ++  +GA
Sbjct: 774  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGA 833

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +C+EAA+ A+EEN+ A  I  +H   A+  V P    S +     +Q
Sbjct: 834  EIIAVCKEAALLALEENIKADCIMKRHFTEALSIVTPRIPESLRRFYEDYQ 884



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 159/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+   +G+LL+GPPGTGKT
Sbjct: 343 QDSQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 400

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 401 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 460

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 461 REGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 520

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          +P+   RL+IL  LL  + H L  +E+  L+   HG+VGADL AL
Sbjct: 521 --------------GIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKAL 566

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 567 CNEAGLHALRRVLRKQ 582



 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 20/270 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 348  KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 407

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESD 889
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R G +S+
Sbjct: 408  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 467

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN
Sbjct: 468  ---VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 524

Query: 947  ETDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EEN 999
              DR +I +  LR++P   +   +  LA  + G  GAD+  +C EA + A+      + N
Sbjct: 525  AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPN 584

Query: 1000 LDAS------RITMQHLKTAIRHVQPSEIH 1023
            L  S      +IT+      +  ++PS + 
Sbjct: 585  LPDSKVAGMVKITLNDFLQGMNDIRPSAMR 614



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 17/212 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 651 SFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 710

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+AA
Sbjct: 711 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAA 770

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M  S 
Sbjct: 771 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMPIS- 815

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            + +++ L + T  + GA++ A+C EAAL+ L
Sbjct: 816 NEVDLDELVLQTDTYSGAEIIAVCKEAALLAL 847


>gi|344277547|ref|XP_003410562.1| PREDICTED: spermatogenesis-associated protein 5 [Loxodonta africana]
          Length = 860

 Score =  325 bits (833), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 212/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF K    +RPSAMREV ++VPKV W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 562  VKITLNDFLKGMNDIRPSAMREVAIDVPKVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 621

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+A+R +F 
Sbjct: 622  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAIREIFR 681

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+A APS++FFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 682  KAKAVAPSVLFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 741

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF +  R +P S+ V++ EL   ++  +GA
Sbjct: 742  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFNLQFRSMPISNGVDLDELILQTDTYSGA 801

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 802  EIIAVCREAALLALEEDIQANCIMKRHFSQALSTVTPRIPESLRRFYEDYQ 852



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/241 (44%), Positives = 156/241 (64%), Gaps = 18/241 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS++   +++II +     +   S G+   +GVLL+GPPGTGKT +AR  A++ G  
Sbjct: 322 IGGLSRQLKAIREIIELPLKQPALFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAY 381

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P R+    E+ +R+V
Sbjct: 382 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVV 441

Query: 532 ATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           A+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI             
Sbjct: 442 ASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI------------- 488

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
             VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL ALCNEA L  LRR  
Sbjct: 489 -GVPNAEDRLDILQKLLRKVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVL 547

Query: 649 K 649
           K
Sbjct: 548 K 548



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 146/269 (54%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV +  +GG       + E +E P K    FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 316  KVTYGMIGGLSRQLKAIREIIELPLKQPALFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 375

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 376  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 433

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 434  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 493

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEE------NL 1000
             DR +I +  LRK+P   ++  + +LA  + G  GAD+  +C EA + A+        N+
Sbjct: 494  EDRLDILQKLLRKVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLKKHPNI 553

Query: 1001 DASR------ITMQHLKTAIRHVQPSEIH 1023
              SR      IT+      +  ++PS + 
Sbjct: 554  PDSRVAGLVKITLNDFLKGMNDIRPSAMR 582



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 126/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E+F  
Sbjct: 623 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAIREIFRK 682

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+V+F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 683 AKAVAPSVLFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 742

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI +     M  S    +
Sbjct: 743 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFNLQFRSMPIS-NGVD 787

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 788 LDELILQTDTYSGAEIIAVCREAALLAL 815


>gi|219519355|gb|AAI45303.1| Spata5 protein [Mus musculus]
          Length = 893

 Score =  325 bits (833), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 209/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH ++F 
Sbjct: 595  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFN 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVTV+AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +C+EAA+ A+EEN+ A  I  +H   A+  V P    S +     +Q
Sbjct: 835  EIIAVCKEAALLALEENIKADCIMKRHFTEALSIVTPRIPESLRRFYEDYQ 885



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 159/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+   +G+LL+GPPGTGKT
Sbjct: 344 QDSQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          +P+   RL+IL  LL  + H L  +E+  L+   HG+VGADL AL
Sbjct: 522 --------------GIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKAL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 568 CNEAGLHALRRVLRKQ 583



 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 20/270 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESD 889
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R G +S+
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 468

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN
Sbjct: 469  ---VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525

Query: 947  ETDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EEN 999
              DR +I +  LR++P   +   +  LA  + G  GAD+  +C EA + A+      + N
Sbjct: 526  AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPN 585

Query: 1000 LDAS------RITMQHLKTAIRHVQPSEIH 1023
            L  S      +IT+      +  ++PS + 
Sbjct: 586  LPDSKVAGMVKITLNDFLQGMNDIRPSAMR 615



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 17/212 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 652 SFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 711

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+AA
Sbjct: 712 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAA 771

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M  S 
Sbjct: 772 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMPIS- 816

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            + +++ L + T  + GA++ A+C EAAL+ L
Sbjct: 817 NEVDLDELVLQTDTYSGAEIIAVCKEAALLAL 848


>gi|148703170|gb|EDL35117.1| spermatogenesis associated 5, isoform CRA_c [Mus musculus]
          Length = 892

 Score =  325 bits (833), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 209/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH ++F 
Sbjct: 594  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFN 653

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 654  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 713

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVTV+AATNR
Sbjct: 714  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 773

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P S++V++ EL   ++  +GA
Sbjct: 774  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGA 833

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +C+EAA+ A+EEN+ A  I  +H   A+  V P    S +     +Q
Sbjct: 834  EIIAVCKEAALLALEENIKADCIMKRHFTEALSIVTPRIPESLRRFYEDYQ 884



 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 159/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+   +G+LL+GPPGTGKT
Sbjct: 343 QDSQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 400

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 401 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 460

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 461 REGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 520

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          +P+   RL+IL  LL  + H L  +E+  L+   HG+VGADL AL
Sbjct: 521 --------------GIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKAL 566

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 567 CNEAGLHALRRVLRKQ 582



 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 20/270 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 348  KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 407

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESD 889
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R G +S+
Sbjct: 408  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 467

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN
Sbjct: 468  ---VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 524

Query: 947  ETDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EEN 999
              DR +I +  LR++P   +   +  LA  + G  GAD+  +C EA + A+      + N
Sbjct: 525  AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPN 584

Query: 1000 LDAS------RITMQHLKTAIRHVQPSEIH 1023
            L  S      +IT+      +  ++PS + 
Sbjct: 585  LPDSKVAGMVKITLNDFLQGMNDIRPSAMR 614



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 17/212 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 651 SFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 710

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+AA
Sbjct: 711 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAA 770

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M  S 
Sbjct: 771 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMPIS- 815

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            + +++ L + T  + GA++ A+C EAAL+ L
Sbjct: 816 NEVDLDELVLQTDTYSGAEIIAVCKEAALLAL 847


>gi|443716909|gb|ELU08202.1| hypothetical protein CAPTEDRAFT_173267 [Capitella teleta]
          Length = 652

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 147/263 (55%), Positives = 201/263 (76%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            V+PSAMREV +EVP V W D+GGQ ++K +L +A+EWP KH EAF R+G RPP G+LM+G
Sbjct: 368  VQPSAMREVAIEVPDVSWSDIGGQGDLKQKLRQAIEWPLKHPEAFLRLGIRPPRGLLMYG 427

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGCSKT++A+A+A E+G+NF+A+KGPELFSKWVGESE+AVR LF KAR+ AP+IIFFDE
Sbjct: 428  PPGCSKTMIAKALARESGINFIAIKGPELFSKWVGESERAVRELFRKARSAAPAIIFFDE 487

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID LA  RG    G  VSDRV++QLL E+DG+    +VT++AATNRPD+ID ALLRPGR 
Sbjct: 488  IDALAGERGSSGGGGDVSDRVLAQLLTEIDGVEALKDVTIVAATNRPDRIDKALLRPGRL 547

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR++YV  P+E  R++IF I  +K P + DVN+  L   + G +GA+++ +C+EAA+ A+
Sbjct: 548  DRIVYVSLPDEATRKQIFLIRFKKTPTADDVNVESLVERTAGYSGAEVAAVCQEAALHAL 607

Query: 997  EENLDASRITMQHLKTAIRHVQP 1019
            +E++    +  +H   A+  V+P
Sbjct: 608  QEDMSLCEVHERHFDMALDLVKP 630



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/253 (40%), Positives = 146/253 (57%), Gaps = 21/253 (8%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLSSL-GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K+  ++ ++I     KS   ++ GL   +GVL++GP GTGKT LA+  +  SGV+
Sbjct: 125 VGGLEKQRCVINEMIDLHLHKSEAMNIHGLNTPRGVLIYGPSGTGKTLLAKSISTQSGVH 184

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              + G E+ S+ YGESE  L ++F  A + APA+VFIDE+DA+ P R     E+ +R++
Sbjct: 185 FVEIQGAEIWSRFYGESESRLTKIFREAKEKAPAIVFIDEIDALCPKRSSSNNEVEKRVI 244

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A+LL +MD +     V  IAATN+ D ++PALRRPGRLDRE+E                V
Sbjct: 245 ASLLTIMDELGSQPPVFFIAATNKRDLLDPALRRPGRLDREVE--------------TGV 290

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE----AALVCLRRY 647
           PS  +R  IL  L+    H L    ++ ++   HGFVGADLAA+C E    A +  L+R 
Sbjct: 291 PSAPERALILSQLIDSTTHMLTKDLIQTIADKAHGFVGADLAAVCKEGFFSAGIRALKRQ 350

Query: 648 --SKIQTSSDVLH 658
             S      D+LH
Sbjct: 351 QNSPCMIYEDLLH 363



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 126/209 (60%), Gaps = 17/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+RP +G+L++GPPG  KT +A+  A +SG+N   + GPE+ S+  GESE+A+ E+F  
Sbjct: 415 LGIRPPRGLLMYGPPGCSKTMIAKALARESGINFIAIKGPELFSKWVGESERAVRELFRK 474

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A  +APA++F DE+DA+A  R    GG ++S R++A LL  +DGV     V ++AATNRP
Sbjct: 475 ARSAAPAIIFFDEIDALAGERGSSGGGGDVSDRVLAQLLTEIDGVEALKDVTIVAATNRP 534

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGRLDR + +              ++P  A R +I          +  D  
Sbjct: 535 DRIDKALLRPGRLDRIVYV--------------SLPDEATRKQIFLIRFKKTP-TADDVN 579

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           VE L   T G+ GA++AA+C EAAL  L+
Sbjct: 580 VESLVERTAGYSGAEVAAVCQEAALHALQ 608



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 143/251 (56%), Gaps = 9/251 (3%)

Query: 776  DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGL 835
            +VGG  + +  + E ++      EA    G   P G+L++GP G  KTL+A+++++++G+
Sbjct: 124  NVGGLEKQRCVINEMIDLHLHKSEAMNIHGLNTPRGVLIYGPSGTGKTLLAKSISTQSGV 183

Query: 836  NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 895
            +F+ ++G E++S++ GESE  +  +F +A+  AP+I+F DEID L   R   ++   V  
Sbjct: 184  HFVEIQGAEIWSRFYGESESRLTKIFREAKEKAPAIVFIDEIDALCPKRSSSNN--EVEK 241

Query: 896  RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFR 955
            RV++ LL  +D L  +  V  IAATN+ D +DPAL RPGR DR +  G P+  +R  I  
Sbjct: 242  RVIASLLTIMDELGSQPPVFFIAATNKRDLLDPALRRPGRLDREVETGVPSAPERALILS 301

Query: 956  --IHLRKIPCSSDVNIRELACLSEGCTGADISLICRE----AAISAIEENLDASRITMQH 1009
              I       + D+ I+ +A  + G  GAD++ +C+E    A I A++   ++  +  + 
Sbjct: 302  QLIDSTTHMLTKDL-IQTIADKAHGFVGADLAAVCKEGFFSAGIRALKRQQNSPCMIYED 360

Query: 1010 LKTAIRHVQPS 1020
            L   +  VQPS
Sbjct: 361  LLHGLNCVQPS 371


>gi|431899684|gb|ELK07638.1| Spermatogenesis-associated protein 5 [Pteropus alecto]
          Length = 907

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 210/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 609  VKITLNDFLQGMSDIRPSAMREVAVDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFT 668

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 669  RMGVQPPKGVLLYGPPGCSKTMIAKALATESGLNFLAIKGPELMNKYVGESERAVREVFR 728

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 729  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEIDGIEQLRDVTILAATNR 788

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF +    +P S DV++ EL   ++  +GA
Sbjct: 789  PDRIDKALMRPGRIDRIVYVPLPDAATRREIFNLQFHSMPISQDVDLDELILRTDTYSGA 848

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   ++  V P    S +     +Q
Sbjct: 849  EIIAVCREAALLALEEDIQANCIMRRHFTQSLSTVTPRIPESLRRFYEDYQ 899



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/248 (44%), Positives = 157/248 (63%), Gaps = 20/248 (8%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 344 QDNQFRVTYDM--IGGLNSQLKAIREIIELPLKQPELFRSYGIPAPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G     +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYFSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR DREIEI
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDREIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VPS   RL+IL  LL  + HSL  +E+  L+ + HG+VGADL AL
Sbjct: 522 --------------GVPSAQDRLDILQKLLRRVPHSLTRAELLQLANSAHGYVGADLKAL 567

Query: 636 CNEAALVC 643
           CNEA L+C
Sbjct: 568 CNEAGLMC 575



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 145/254 (57%), Gaps = 7/254 (2%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++ +GG       + E +E P K  E F+  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  RVTYDMIGGLNSQLKAIREIIELPLKQPELFRSYGIPAPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYFSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFDR + +G P+ 
Sbjct: 467  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDREIEIGVPSA 526

Query: 948  TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRIT 1006
             DR +I +  LR++P S +   + +LA  + G  GAD+  +C EA +    + L   +  
Sbjct: 527  QDRLDILQKLLRRVPHSLTRAELLQLANSAHGYVGADLKALCNEAGLMCAGKELREGKTG 586

Query: 1007 MQHLKTAIRHVQPS 1020
            +  L+  ++  QP+
Sbjct: 587  LYALRRVLKK-QPN 599



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 128/212 (60%), Gaps = 17/212 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A +SG+N   + GPE++++  GESE+A+ E
Sbjct: 666 SFTRMGVQPPKGVLLYGPPGCSKTMIAKALATESGLNFLAIKGPELMNKYVGESERAVRE 725

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A   AP+++F DELDA+A  R    G   ++ R++A LL  +DG+ +   V ++AA
Sbjct: 726 VFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEIDGIEQLRDVTILAA 785

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR + + +              P  A R EI +     M  S 
Sbjct: 786 TNRPDRIDKALMRPGRIDRIVYVPL--------------PDAATRREIFNLQFHSMPIS- 830

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            D +++ L + T  + GA++ A+C EAAL+ L
Sbjct: 831 QDVDLDELILRTDTYSGAEIIAVCREAALLAL 862


>gi|348687318|gb|EGZ27132.1| hypothetical protein PHYSODRAFT_308554 [Phytophthora sojae]
          Length = 755

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 157/301 (52%), Positives = 212/301 (70%), Gaps = 5/301 (1%)

Query: 723  FHNGVSD---SSGGMFMSEKGC-ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVG 778
             H   +D   S+G +  S     A ++ L D + A   +RPSA+RE+ ++VP+V W D+G
Sbjct: 437  LHRAFADNAQSTGAVLASSDSLPAFEVTLSDLKLAMRGIRPSALREISVDVPRVLWNDIG 496

Query: 779  GQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFL 838
            GQ  +K  L EAVEWP +H EAF R+G RPP G+L++GPPGCSKTL A+A+A+E+G+NF+
Sbjct: 497  GQDALKQALREAVEWPLQHPEAFTRMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFI 556

Query: 839  AVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVM 898
            A+KGPELFSKWVGESE+ VR +F KARA +P+++FFDEID LA+ RG      + SDRV+
Sbjct: 557  AIKGPELFSKWVGESEQQVREVFRKARAASPTVVFFDEIDALASTRGSGGGSGA-SDRVL 615

Query: 899  SQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            SQLL ELDGL     V V+AATNRPD +DPAL+RPGR DR LYV PP+   RE+I +IH 
Sbjct: 616  SQLLTELDGLEPLKRVLVVAATNRPDLLDPALMRPGRIDRALYVSPPDVPVREQILQIHT 675

Query: 959  RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            RK P +SDV++ ELA  +   +GA++  +CREAA+ A+EE+  A  +  +H   A+  V 
Sbjct: 676  RKTPLASDVSLAELAIATARFSGAELQALCREAALHAVEEDRAAVNVAKRHFVRALSIVT 735

Query: 1019 P 1019
            P
Sbjct: 736  P 736



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/424 (34%), Positives = 227/424 (53%), Gaps = 48/424 (11%)

Query: 253 MYQPRLSSQSVNQLASPVSEDS--VSKSLNWNSLNVDAFDIKEVLEDESAIKLLQTCAAS 310
           M++  ++ Q V  +   + ++S  V+KS+    ++  +   +++ E E    LL  C ++
Sbjct: 78  MWEAAVAEQQVETVTVQILQNSSAVAKSVALRLVSRASTRKQKLSEKERT--LLTRCISA 135

Query: 311 WLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPAD----LTNERSQPQVTESMDHESNAF 366
            +    +  G L+++P+    S+F V   +    D    ++   ++  +T S + +    
Sbjct: 136 MIDGALVHSGALISLPLHGVNSVFRVEKVDGGSGDNQSIVSIAAAKTALTVSWEEKQEEL 195

Query: 367 VINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDI 426
           V+  ++      P  A  K+ ++G                    S +GGL +E   ++++
Sbjct: 196 VVEKKS----VGPTEAAGKAKQDG-------------------FSAIGGLHEELKAIREV 232

Query: 427 IISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNY 485
           +        T    GL   KGVLL GPPGTGKT +AR  A +    +FT+NGPEVVS+  
Sbjct: 233 VEQPLTNPETFERFGLPAPKGVLLFGPPGTGKTLIARTLARELNARVFTINGPEVVSKFV 292

Query: 486 GESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTD 545
           GESE  L  VF  A++ AP++VFIDELDAI P R     ++ +R+VATLL LMDG+  + 
Sbjct: 293 GESEANLRAVFAQAAREAPSLVFIDELDAICPKRDSRVGDMERRLVATLLTLMDGLSASR 352

Query: 546 GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
            V+V+AATNRP+S++PA+RRPGR DRE+EI               +P    RL IL   L
Sbjct: 353 QVVVLAATNRPNSLDPAVRRPGRFDREVEI--------------GIPRAKDRLAILRVAL 398

Query: 606 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR--YSKIQTSSDVLHSTGTL 663
             + H L +SE++ LS + HG+VGADL+ALC EAAL+ L R      Q++  VL S+ +L
Sbjct: 399 RRLPHKLTNSELQELSSSAHGYVGADLSALCKEAALLALHRAFADNAQSTGAVLASSDSL 458

Query: 664 FEFE 667
             FE
Sbjct: 459 PAFE 462



 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 106/281 (37%), Positives = 165/281 (58%), Gaps = 23/281 (8%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 836
            +GG  E    + E VE P  + E F+R G   P G+L+FGPPG  KTL+AR +A E    
Sbjct: 219  IGGLHEELKAIREVVEQPLTNPETFERFGLPAPKGVLLFGPPGTGKTLIARTLARELNAR 278

Query: 837  FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR 896
               + GPE+ SK+VGESE  +R++FA+A   APS++F DE+D +   R  +S    +  R
Sbjct: 279  VFTINGPEVVSKFVGESEANLRAVFAQAAREAPSLVFIDELDAICPKR--DSRVGDMERR 336

Query: 897  VMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRI 956
            +++ LL  +DGL     V V+AATNRP+ +DPA+ RPGRFDR + +G P   DR  I R+
Sbjct: 337  LVATLLTLMDGLSASRQVVVLAATNRPNSLDPAVRRPGRFDREVEIGIPRAKDRLAILRV 396

Query: 957  HLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIE-----------------E 998
             LR++P   ++  ++EL+  + G  GAD+S +C+EAA+ A+                  +
Sbjct: 397  ALRRLPHKLTNSELQELSSSAHGYVGADLSALCKEAALLALHRAFADNAQSTGAVLASSD 456

Query: 999  NLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSN 1039
            +L A  +T+  LK A+R ++PS   + +E+S    R++ ++
Sbjct: 457  SLPAFEVTLSDLKLAMRGIRPS---ALREISVDVPRVLWND 494



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/207 (44%), Positives = 125/207 (60%), Gaps = 16/207 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +G+RP KGVLL+GPPG  KT  A+  A +SG+N   + GPE+ S+  GESEQ + EV
Sbjct: 519 FTRMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFIAIKGPELFSKWVGESEQQVREV 578

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEEL-SQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  ++P VVF DE+DA+A  R  GG    S R+++ LL  +DG+     VLV+AATN
Sbjct: 579 FRKARAASPTVVFFDEIDALASTRGSGGGSGASDRVLSQLLTELDGLEPLKRVLVVAATN 638

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD ++PAL RPGR+DR + +           SP  VP   Q L+I H   + +     D
Sbjct: 639 RPDLLDPALMRPGRIDRALYV-----------SPPDVPVREQILQI-HTRKTPLAS---D 683

Query: 615 SEVEYLSMATHGFVGADLAALCNEAAL 641
             +  L++AT  F GA+L ALC EAAL
Sbjct: 684 VSLAELAIATARFSGAELQALCREAAL 710


>gi|19880131|gb|AAM00262.1|AF361489_1 spermatogenesis associated factor [Homo sapiens]
          Length = 893

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 210/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 595  VKITLKDFFQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE + A+ I  +H   A+  V P    S +     +Q
Sbjct: 835  EIVAVCREAALLALEEGIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 885



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 160/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 522 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 568 CNEAGLCALRRILKKQ 583



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 467  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 527  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNL 586

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT++    A+  ++PS + 
Sbjct: 587  PDVKVAGLVKITLKDFFQAMNDIRPSAMR 615



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 715

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 775

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 776 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 820

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 821 LDELILQTDAYSGAEIVAVCREAALLAL 848


>gi|332028592|gb|EGI68629.1| Spermatogenesis-associated protein 5 [Acromyrmex echinatior]
          Length = 796

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 159/296 (53%), Positives = 209/296 (70%), Gaps = 7/296 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ ++DF  A    RPSAM+EV++EVP V+W D+GGQ ++K +L ++VEWP KH EAF 
Sbjct: 499  LKVTMIDFHYALTVTRPSAMKEVLVEVPNVRWSDIGGQEDLKLKLKQSVEWPLKHPEAFV 558

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP G+LMFGPPGCSKT++A+A+A+E+ +NFL +KGPELFSKWVGESEKAVR +F 
Sbjct: 559  RMGITPPRGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFR 618

Query: 863  KARANAPSIIFFDEIDGL--AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
            KAR  APSIIF DEID L           G +V +RV++QLL ELDG+    NVT++AAT
Sbjct: 619  KARQVAPSIIFIDEIDALGGERGSSSGGSGSNVQERVLAQLLTELDGVTALGNVTLVAAT 678

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP-CSSDVNIRELACLSEGC 979
            NRPDKID ALLRPGR DR++YVG P+E  R EIF I LR +     +VNI EL   ++  
Sbjct: 679  NRPDKIDKALLRPGRLDRIIYVGLPDEKTRREIFEIKLRHMNIVKEEVNIMELVSRTKDY 738

Query: 980  TGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP----SEIHSYKELSAK 1031
            TGA+I  +C EAA+ A+EE+++A+ +T +H   A   + P    S I  YK+   K
Sbjct: 739  TGAEIQALCHEAAMKALEEDINATLVTKEHFDAAFGAITPRTPDSLIKIYKDYMNK 794



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 172/354 (48%), Gaps = 61/354 (17%)

Query: 320 GNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLYPP 379
           GN ++VP   +  ++ ++        +  E+S+ + TE+MD                   
Sbjct: 181 GNRISVPYYGKKLVYKIV-------QIKAEKSKKKPTETMD------------------- 214

Query: 380 LNAVSKSLREGTLPNAQIEFQNVQATVE---------------QDISKLGGLSKEYAILK 424
           +N +SK  ++  L + +++F     T +                 I  +GG     A++ 
Sbjct: 215 VNDLSKPFKDMNLTSTKVDFYKALYTTKWTILDKDKENVAKERHKIEDIGGYG---ALIS 271

Query: 425 DI--IISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVS 482
           DI  I++  +    S       KG+LL+GP G GK+ +A     +  VN F V+  ++ S
Sbjct: 272 DIRDIVAIGIGKYKSIERFNICKGILLYGPSGVGKSMIANAIISECNVNTFIVHSSDIYS 331

Query: 483 QNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC 542
           ++ GE+E  L EVF  A  SAP+++  +++D++ P R +   +  +R++  L+ L D + 
Sbjct: 332 KSVGETEDKLKEVFSKAISSAPSIILFEDVDSLCPKRNNSSTDHEKRVLTQLVTLFDDLQ 391

Query: 543 R-TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEIL 601
              + VLV+A T + D ++ +LRRPGRLD + EI               VP+P  R EIL
Sbjct: 392 NINNNVLVMATTAKSDLVDSSLRRPGRLDMDFEI--------------YVPTPDMRKEIL 437

Query: 602 HALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
             LLS + ++L   +++ +S  THGFVGADL  LC+ A +  ++   K  T  D
Sbjct: 438 MKLLSKIPNTLSCEDIQNISFVTHGFVGADLYGLCSRAIINAVKCCQKRTTFDD 491



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 22/212 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P +GVL+ GPPG  KT +A+  A +S VN   + GPE+ S+  GESE+A+ EVF  
Sbjct: 560 MGITPPRGVLMFGPPGCSKTMIAKALATESKVNFLNIKGPELFSKWVGESEKAVREVFRK 619

Query: 499 ASQSAPAVVFIDELDAI----APARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A Q AP+++FIDE+DA+      +    G  + +R++A LL  +DGV     V ++AATN
Sbjct: 620 ARQVAPSIIFIDEIDALGGERGSSSGGSGSNVQERVLAQLLTELDGVTALGNVTLVAATN 679

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+ AL RPGRLDR I +               +P    R EI    L  M  +++ 
Sbjct: 680 RPDKIDKALLRPGRLDRIIYV--------------GLPDEKTRREIFEIKLRHM--NIVK 723

Query: 615 SEVEYLSMA--THGFVGADLAALCNEAALVCL 644
            EV  + +   T  + GA++ ALC+EAA+  L
Sbjct: 724 EEVNIMELVSRTKDYTGAEIQALCHEAAMKAL 755



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 136/254 (53%), Gaps = 8/254 (3%)

Query: 748 VDFEKARMKVRPSAMREVILEVPKV--KWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIG 805
           VDF KA    + + + +    V K   K ED+GG   + + + + V       ++ +R  
Sbjct: 232 VDFYKALYTTKWTILDKDKENVAKERHKIEDIGGYGALISDIRDIVAIGIGKYKSIERFN 291

Query: 806 TRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR 865
                GIL++GP G  K+++A A+ SE  +N   V   +++SK VGE+E  ++ +F+KA 
Sbjct: 292 I--CKGILLYGPSGVGKSMIANAIISECNVNTFIVHSSDIYSKSVGETEDKLKEVFSKAI 349

Query: 866 ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ-RVNVTVIAATNRPD 924
           ++APSII F+++D L   R   S       RV++QL+   D L     NV V+A T + D
Sbjct: 350 SSAPSIILFEDVDSLCPKRNNSS--TDHEKRVLTQLVTLFDDLQNINNNVLVMATTAKSD 407

Query: 925 KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGAD 983
            +D +L RPGR D    +  P    R+EI    L KIP + S  +I+ ++ ++ G  GAD
Sbjct: 408 LVDSSLRRPGRLDMDFEIYVPTPDMRKEILMKLLSKIPNTLSCEDIQNISFVTHGFVGAD 467

Query: 984 ISLICREAAISAIE 997
           +  +C  A I+A++
Sbjct: 468 LYGLCSRAIINAVK 481


>gi|145591861|ref|YP_001153863.1| ATPase AAA [Pyrobaculum arsenaticum DSM 13514]
 gi|145283629|gb|ABP51211.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum arsenaticum DSM
            13514]
          Length = 737

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/303 (50%), Positives = 216/303 (71%), Gaps = 9/303 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   V P+ +REVI+EVP+V W+D+GG   +K +L E VEWP K++  F+
Sbjct: 432  LKVGMSDFLEAMKFVHPTVLREVIIEVPEVHWDDIGGYDAIKQELREIVEWPMKYRHYFE 491

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KTL A+AVA+E+G NF+AV+GPEL SKWVGESEKA+R +F 
Sbjct: 492  ELGVEPPKGILLFGPPGVGKTLFAKAVATESGANFIAVRGPELLSKWVGESEKAIREVFK 551

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP +IFFDEID +A  RG       V+DR+++QLL E+DG+    NV V+AATNR
Sbjct: 552  KARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDRMVNQLLAEMDGIGTLKNVVVMAATNR 611

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R EIF++H +K+  ++DVN+ ELA  +EG TGA
Sbjct: 612  PDILDPALLRPGRFDRIIYVPPPDIKARLEIFKVHTKKVKLANDVNLEELAKKTEGYTGA 671

Query: 983  DISLICREAAISAIEENLD-----ASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            DI+ + REAA+ A+ E +      A  ++M+H + A++ + PS    ++  Y+E++ + +
Sbjct: 672  DIAAVVREAAMLALRETIKERSVGAKPVSMKHFEEALKRIPPSLTPEDMRRYEEVAKRLR 731

Query: 1034 RLV 1036
            R +
Sbjct: 732  RAI 734



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 111/241 (46%), Positives = 157/241 (65%), Gaps = 15/241 (6%)

Query: 757 VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
           VR   ++E  L +P++ WED+G   + K ++ E VE P +H E FK +G  PP GIL+ G
Sbjct: 158 VREEPVKEAELTIPRITWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIG 217

Query: 817 PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
           PPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DE
Sbjct: 218 PPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDE 277

Query: 877 IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
           ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRF
Sbjct: 278 IDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRF 335

Query: 937 DRLLYVGPPNETDREEIFRIHLRKIP-CSS------------DVNIRELACLSEGCTGAD 983
           DR +++  P++  R EI  +H R +P C+             +V++ ++A ++ G TGAD
Sbjct: 336 DREIHIPMPDKRARREILAVHTRNMPLCTKADVEAKVCNPGDEVDLDKIAEMTHGYTGAD 395

Query: 984 I 984
           I
Sbjct: 396 I 396



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/223 (44%), Positives = 137/223 (61%), Gaps = 26/223 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 202 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 261

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 262 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVVVIGATNR 321

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM------- 608
           PD+++PALRRPGR DREI I M              P    R EIL      M       
Sbjct: 322 PDAVDPALRRPGRFDREIHIPM--------------PDKRARREILAVHTRNMPLCTKAD 367

Query: 609 -EHSLLDS----EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            E  + +     +++ ++  THG+ GAD+AAL  EAA+  LR+
Sbjct: 368 VEAKVCNPGDEVDLDKIAEMTHGYTGADIAALAKEAAMAALRK 410



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 136/242 (56%), Gaps = 22/242 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG       L++I+      +     LG+ P KG+LL GPPG GKT  A+  A +SG N
Sbjct: 466 IGGYDAIKQELREIVEWPMKYRHYFEELGVEPPKGILLFGPPGVGKTLFAKAVATESGAN 525

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
              V GPE++S+  GESE+A+ EVF  A  +AP V+F DE+D+IAPAR  + G   ++ R
Sbjct: 526 FIAVRGPELLSKWVGESEKAIREVFKKARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDR 585

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           MV  LL  MDG+     V+V+AATNRPD ++PAL RPGR DR I                
Sbjct: 586 MVNQLLAEMDGIGTLKNVVVMAATNRPDILDPALLRPGRFDRII---------------- 629

Query: 590 AVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            VP P    RLEI       ++ +  D  +E L+  T G+ GAD+AA+  EAA++ LR  
Sbjct: 630 YVPPPDIKARLEIFKVHTKKVKLA-NDVNLEELAKKTEGYTGADIAAVVREAAMLALRET 688

Query: 648 SK 649
            K
Sbjct: 689 IK 690


>gi|395735311|ref|XP_002815167.2| PREDICTED: spermatogenesis-associated protein 5 isoform 1 [Pongo
            abelii]
          Length = 985

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 211/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 687  VKITLNDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 746

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 747  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 806

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 807  KARAVAPSIIFFDELDALAIERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 866

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 867  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 926

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 927  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 977



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/258 (43%), Positives = 161/258 (62%), Gaps = 20/258 (7%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           E Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTG
Sbjct: 434 EEQDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTG 491

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ 
Sbjct: 492 KTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALC 551

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREI 573
           P R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EI
Sbjct: 552 PKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEI 611

Query: 574 EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
           EI               VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL 
Sbjct: 612 EI--------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLK 657

Query: 634 ALCNEAALVCLRRYSKIQ 651
            LCNEA L  LRR  K Q
Sbjct: 658 VLCNEAGLCALRRILKKQ 675



 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 149/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 441  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 500

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 501  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 558

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 559  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 618

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 619  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNL 678

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT+     A+  ++PS + 
Sbjct: 679  PDVKVAGLVKITLNDFLQAMNDIRPSAMR 707



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 748 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 807

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 808 ARAVAPSIIFFDELDALAIERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 867

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 868 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 912

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 913 LDELILQTDAYSGAEIVAVCREAALLAL 940


>gi|256810701|ref|YP_003128070.1| AAA ATPase [Methanocaldococcus fervens AG86]
 gi|256793901|gb|ACV24570.1| AAA family ATPase, CDC48 subfamily [Methanocaldococcus fervens AG86]
          Length = 903

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/276 (56%), Positives = 208/276 (75%), Gaps = 1/276 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF++A   V PSAMREV++EVP VKWED+GG  EVK +L EAVEWP K +E F+
Sbjct: 420  LKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFE 479

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +IG RPP G+L+FGPPG  KTL+A+AVA+E+G NF++VKGPE+FSKWVGESEKA+R +F 
Sbjct: 480  KIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFR 539

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR +AP IIFFDEID +A  RG++    +V+D+V++QLL ELDG+ +  +V VIAATNR
Sbjct: 540  KARQSAPCIIFFDEIDAIAPKRGRDLSS-AVTDKVVNQLLTELDGMEEPKDVVVIAATNR 598

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGR DR++ V  P+E  R +IF+IH R +  + DV++ ELA  +EG TGA
Sbjct: 599  PDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRGMNLAEDVDLEELAKKTEGYTGA 658

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            DI  +CREAA+ A+ +++         L+  I ++Q
Sbjct: 659  DIEALCREAAMLAVRKSIGKPWGIETALRDLINYLQ 694



 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 127/292 (43%), Positives = 188/292 (64%), Gaps = 20/292 (6%)

Query: 745  LELVDFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            + + DF    +K  P S ++E   ++P V +ED+GG +E   ++ E +E P +H E F++
Sbjct: 150  VRVTDFTHVELKEEPVSEIKEA--KIPDVTYEDIGGLKEEVRKVREMIELPMRHPELFEK 207

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+ +R +F +
Sbjct: 208  LGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEE 267

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            A  NAPSIIF DEID +A  R  E+ G  V  R+++QLL  +DGL  R  V VI ATNRP
Sbjct: 268  AEENAPSIIFIDEIDAIAPKR-DEATG-EVERRLVAQLLTLMDGLKGRGQVVVIGATNRP 325

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            + +DPAL RPGRFDR + +G P+   R+EI +IH R +P + DV++  LA ++ G  GAD
Sbjct: 326  NALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGAD 385

Query: 984  ISLICREAAISAI---------------EENLDASRITMQHLKTAIRHVQPS 1020
            ++ +C+EAA+ A+               +E LD  ++TM   K A++ V+PS
Sbjct: 386  LAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPS 437



 Score =  213 bits (541), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 113/255 (44%), Positives = 161/255 (63%), Gaps = 19/255 (7%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P ++I+   +     +DI   GGL +E   ++++I +          LG+ P KGVLL G
Sbjct: 164 PVSEIKEAKIPDVTYEDI---GGLKEEVRKVREMIELPMRHPELFEKLGIEPPKGVLLVG 220

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A+++G N + +NGPE++S+  GE+E+ L ++F+ A ++AP+++FIDE
Sbjct: 221 PPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDE 280

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNRP++++PALRRPGR DR
Sbjct: 281 IDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDR 340

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
           EI I               VP    R EIL      M  +  D +++YL+  THGFVGAD
Sbjct: 341 EIVI--------------GVPDREGRKEILQIHTRNMPLA-EDVDLDYLADVTHGFVGAD 385

Query: 632 LAALCNEAALVCLRR 646
           LAALC EAA+  LRR
Sbjct: 386 LAALCKEAAMRALRR 400



 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 134/215 (62%), Gaps = 16/215 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K     +G+RP KGVLL GPPGTGKT LA+  A++SG N  +V GPE+ S+  GESE+A+
Sbjct: 475 KEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAI 534

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            E+F  A QSAP ++F DE+DAIAP R +D    ++ ++V  LL  +DG+     V+VIA
Sbjct: 535 REIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIA 594

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLDR I +               VP    RL+I      GM  +
Sbjct: 595 ATNRPDIIDPALLRPGRLDRVILV--------------PVPDEKARLDIFKIHTRGMNLA 640

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             D ++E L+  T G+ GAD+ ALC EAA++ +R+
Sbjct: 641 -EDVDLEELAKKTEGYTGADIEALCREAAMLAVRK 674


>gi|379003441|ref|YP_005259113.1| AAA ATPase [Pyrobaculum oguniense TE7]
 gi|375158894|gb|AFA38506.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum oguniense TE7]
          Length = 737

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/303 (50%), Positives = 216/303 (71%), Gaps = 9/303 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   V P+ +REVI+EVP+V W+D+GG   +K +L E VEWP K++  F+
Sbjct: 432  LKVGMSDFLEAMKFVHPTVLREVIIEVPEVHWDDIGGYDAIKQELREIVEWPMKYRHYFE 491

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KTL A+AVA+E+G NF+AV+GPEL SKWVGESEKA+R +F 
Sbjct: 492  ELGVEPPKGILLFGPPGVGKTLFAKAVATESGANFIAVRGPELLSKWVGESEKAIREVFK 551

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP +IFFDEID +A  RG       V+DR+++QLL E+DG+    NV V+AATNR
Sbjct: 552  KARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDRMVNQLLAEMDGIGTLKNVVVMAATNR 611

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R EIF++H +K+  ++DVN+ ELA  +EG TGA
Sbjct: 612  PDILDPALLRPGRFDRIIYVPPPDIKARLEIFKVHTKKVKLANDVNLEELAKKTEGYTGA 671

Query: 983  DISLICREAAISAIEENLD-----ASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            DI+ + REAA+ A+ E +      A  ++M+H + A++ + PS    ++  Y+E++ + +
Sbjct: 672  DIAAVVREAAMLALRETIKERSVGAKPVSMKHFEEALKRIPPSLTPEDMRRYEEVAKRLR 731

Query: 1034 RLV 1036
            R +
Sbjct: 732  RAI 734



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 111/241 (46%), Positives = 157/241 (65%), Gaps = 15/241 (6%)

Query: 757 VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
           VR   ++E  L +P++ WED+G   + K ++ E VE P +H E FK +G  PP GIL+ G
Sbjct: 158 VREEPVKEAELTIPRITWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIG 217

Query: 817 PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
           PPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DE
Sbjct: 218 PPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDE 277

Query: 877 IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
           ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRF
Sbjct: 278 IDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRF 335

Query: 937 DRLLYVGPPNETDREEIFRIHLRKIP-CSS------------DVNIRELACLSEGCTGAD 983
           DR +++  P++  R EI  +H R +P C+             +V++ ++A ++ G TGAD
Sbjct: 336 DREIHIPMPDKRARREILAVHTRNMPLCTKADVEAKVCNPGDEVDLDKIAEMTHGYTGAD 395

Query: 984 I 984
           I
Sbjct: 396 I 396



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/223 (44%), Positives = 137/223 (61%), Gaps = 26/223 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 202 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 261

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 262 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVVVIGATNR 321

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM------- 608
           PD+++PALRRPGR DREI I M              P    R EIL      M       
Sbjct: 322 PDAVDPALRRPGRFDREIHIPM--------------PDKRARREILAVHTRNMPLCTKAD 367

Query: 609 -EHSLLDS----EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            E  + +     +++ ++  THG+ GAD+AAL  EAA+  LR+
Sbjct: 368 VEAKVCNPGDEVDLDKIAEMTHGYTGADIAALAKEAAMAALRK 410



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 136/242 (56%), Gaps = 22/242 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG       L++I+      +     LG+ P KG+LL GPPG GKT  A+  A +SG N
Sbjct: 466 IGGYDAIKQELREIVEWPMKYRHYFEELGVEPPKGILLFGPPGVGKTLFAKAVATESGAN 525

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
              V GPE++S+  GESE+A+ EVF  A  +AP V+F DE+D+IAPAR  + G   ++ R
Sbjct: 526 FIAVRGPELLSKWVGESEKAIREVFKKARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDR 585

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           MV  LL  MDG+     V+V+AATNRPD ++PAL RPGR DR I                
Sbjct: 586 MVNQLLAEMDGIGTLKNVVVMAATNRPDILDPALLRPGRFDRII---------------- 629

Query: 590 AVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            VP P    RLEI       ++ +  D  +E L+  T G+ GAD+AA+  EAA++ LR  
Sbjct: 630 YVPPPDIKARLEIFKVHTKKVKLA-NDVNLEELAKKTEGYTGADIAAVVREAAMLALRET 688

Query: 648 SK 649
            K
Sbjct: 689 IK 690


>gi|335437622|ref|ZP_08560394.1| AAA family ATPase, CDC48 subfamily protein [Halorhabdus tiamatea
            SARL4B]
 gi|334895310|gb|EGM33484.1| AAA family ATPase, CDC48 subfamily protein [Halorhabdus tiamatea
            SARL4B]
          Length = 742

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/308 (50%), Positives = 211/308 (68%), Gaps = 3/308 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W+DVGG    K  + E++EWP    E F+R+G  P
Sbjct: 436  DFKGALNEVSPSAMREVLVELPKISWDDVGGLESAKNDVQESIEWPMTTPEKFERMGVAP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDE+D LA  RG +  G +VS+RV++QLL E+DGL    +V VI ATNRPD IDP
Sbjct: 556  PTVVFFDELDSLAPGRGGQGSGSNVSERVVNQLLTEMDGLEDMEDVMVIGATNRPDMIDP 615

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+Y+G P+   REEI +IH R  P S DV++RELA ++EG  G+D+  I 
Sbjct: 616  ALIRSGRFDRLVYIGEPDVDGREEILQIHTRDSPLSPDVSLRELAEITEGYVGSDLESIA 675

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQ 1048
            RE+AI A+ EN DA  I M H ++A+  V+P+     +E    F+++            Q
Sbjct: 676  RESAIQALRENDDAEEIGMAHFRSALEGVRPTVTDDIREY---FEQMEDQFKGGGPDSRQ 732

Query: 1049 LRPSKSIG 1056
             R S  IG
Sbjct: 733  PRGSDRIG 740



 Score =  223 bits (568), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 162/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + FK++G  PP+G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLENEIQRVREMVELPMKHPQIFKKLGIEPPSGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVVVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILKIHTRGMPLSDDVDLPGLAEDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   I     K A+  V PS
Sbjct: 424  PSLIDRMIIKRDDFKGALNEVSPS 447



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P  GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLENEIQRVREMVELPMKHPQIFKKLGIEPPSGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVVVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D ++  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILKIHTRGMPLS-DDVDLPGLAEDTHGFVGADIESLTKEAAMKALRRY 411



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 134/238 (56%), Gaps = 22/238 (9%)

Query: 413 LGGL-SKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL S +  + + I    +       +G+ P  GVLL+GPPGTGKT +A+  A+++  N
Sbjct: 464 VGGLESAKNDVQESIEWPMTTPEKFERMGVAPPSGVLLYGPPGTGKTLMAKAVANETDAN 523

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             +V GP+++S+  GESE+A+ + F  A Q AP VVF DELD++AP R  +  G  +S+R
Sbjct: 524 FISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVVFFDELDSLAPGRGGQGSGSNVSER 583

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL  MDG+   + V+VI ATNRPD I+PAL R GR DR + I              
Sbjct: 584 VVNQLLTEMDGLEDMEDVMVIGATNRPDMIDPALIRSGRFDRLVYI-------------- 629

Query: 590 AVPSPAQRLEIL--HALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             P    R EIL  H   S +     D  +  L+  T G+VG+DL ++  E+A+  LR
Sbjct: 630 GEPDVDGREEILQIHTRDSPLSP---DVSLRELAEITEGYVGSDLESIARESAIQALR 684


>gi|302666109|ref|XP_003024657.1| hypothetical protein TRV_01174 [Trichophyton verrucosum HKI 0517]
 gi|291188723|gb|EFE44046.1| hypothetical protein TRV_01174 [Trichophyton verrucosum HKI 0517]
          Length = 814

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 217/639 (33%), Positives = 325/639 (50%), Gaps = 88/639 (13%)

Query: 413  LGGLSKEYAILKDIIISSSVKSTLSSLG--LRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
            LGGL+ + A++ + +   + +  +  +    + T G+L++G  GTGK+++       +  
Sbjct: 236  LGGLAPQLAVVNERLQDFNTQDQMIIMPSFYKSTGGILIYGAKGTGKSAMLAKIGEANWR 295

Query: 471  NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE---ELS 527
              F V    + S+  G+    L ++F  A +  P+++ ID+LD IAP R   G     LS
Sbjct: 296  RTFNVTS-SITSRTGGDGAAVLRKIFSDALKYQPSLIKIDQLDFIAPKRSSTGPADVSLS 354

Query: 528  QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
              +   L +L D       VLV+A T  P+ ++  LR P RL  EIE+            
Sbjct: 355  PALCEALDSLQDS-----KVLVVACTRHPNDVDDCLRTPHRLGIEIELQ----------- 398

Query: 588  PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL----CNEAALVC 643
               +P+   RLEIL AL  G      +  +E ++  THG+VGADL +L    C +A    
Sbjct: 399  ---IPTSKSRLEILQAL-RGSATQPTNRVLETIAAKTHGYVGADLLSLLQLSCRKAKARM 454

Query: 644  LRRYSKIQTSSDVLHSTGTLF--EFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDL 701
            L        ++         +  E+E  SD    + D      E   D LD         
Sbjct: 455  LSPAPPPPPTNGTSTFRNRFYAGEYENESDGYFDEDDEEDGYYE---DHLD--------- 502

Query: 702  PTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSA 761
                                               S+K   LK+   D   A  ++RP+A
Sbjct: 503  ---------------------------------LSSDKPRLLKIYEKDMLLAMKEIRPTA 529

Query: 762  MREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCS 821
            MREV LE P V+W D+GGQ  +K +L +AVE P K+ E  K +      GIL++GPPGCS
Sbjct: 530  MREVFLETPSVRWSDIGGQGYIKDRLQKAVERPLKNPERMKNLNISGKRGILLYGPPGCS 589

Query: 822  KTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA 881
            KT+M +A+A+EAGLNFLAVKG E+ S +VGESE+A+R +F KARA +PSIIFFDEID +A
Sbjct: 590  KTMMVKALATEAGLNFLAVKGAEMLSMYVGESERAMREIFRKARAASPSIIFFDEIDAIA 649

Query: 882  AIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLY 941
            A R   S G      +++ LL E+DG+ +  NV V+AATN+P+ +DPAL+RPGR D +LY
Sbjct: 650  ARRDAGSHG---GINILTTLLNEMDGIEELKNVLVVAATNKPEILDPALMRPGRLDSILY 706

Query: 942  VGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
            +G P+   R+EIF   + +     +V+   LA +++G +GA++  IC  AA   ++E  +
Sbjct: 707  IGLPDMEARKEIFENWIDRADVDDEVDAIILASMTDGHSGAELVNICETAAELCLDEEEE 766

Query: 1002 AS----RITMQHLKTAIRHV----QPSEIHSYKELSAKF 1032
                  +I  QH + ++  V    QP  I +Y+E S  F
Sbjct: 767  KRMPNLQIQAQHFQASLEMVPKRTQPEVIQAYEEWSRSF 805


>gi|288930616|ref|YP_003434676.1| ATPase AAA, CDC48 subfamily [Ferroglobus placidus DSM 10642]
 gi|288892864|gb|ADC64401.1| AAA family ATPase, CDC48 subfamily [Ferroglobus placidus DSM 10642]
          Length = 791

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 162/310 (52%), Positives = 215/310 (69%), Gaps = 18/310 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   + PSAMREV++EVPKV W D+GG    K +L EAVEWP K+ E FK
Sbjct: 481  LKVTKEDFLEALKNIEPSAMREVLVEVPKVTWNDIGGLEHAKQELREAVEWPFKYPELFK 540

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G +PP GIL++GPPG  KTL+A+AVA+E+  NF++VKGPEL SKWVGESEK VR +F 
Sbjct: 541  AVGIKPPKGILLYGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFR 600

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP ++FFDEID LA  RG   D   V++RV+SQLL ELDGL +  +V VIAATNR
Sbjct: 601  KARQVAPCVLFFDEIDSLAPRRGTGGD-THVTERVVSQLLTELDGLEELKDVVVIAATNR 659

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGR +R +Y+ PP+E  R EIF+IH R +P   DVN+ ELA  +EG +GA
Sbjct: 660  PDMIDPALLRPGRLERHIYIPPPDEKARLEIFKIHTRGMPLDEDVNLEELAKKTEGYSGA 719

Query: 983  DISLICREAAISAIEENL----------DASR---ITMQHLKTAIRHVQPS----EIHSY 1025
            DI  +CREA + AI E +          +A+R   ++ +H + A+R ++PS    +I  Y
Sbjct: 720  DIEAVCREAGMLAIREAIANVKSEEEVKEAARKIKVSKRHFEEALRKIKPSLTKEDIERY 779

Query: 1026 KELSAKFQRL 1035
            +++   FQ++
Sbjct: 780  EKIVKDFQKM 789



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/230 (48%), Positives = 150/230 (65%), Gaps = 9/230 (3%)

Query: 740 GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG-QREVKTQLMEAVEWPQKHQ 798
           G  +     DFE     ++   + EV   VP V +ED+GG +RE++  + E +E P KH 
Sbjct: 149 GVVIVTPTTDFE-----IKEKPVEEVKRSVPSVTYEDIGGLKRELRL-VREMIELPLKHP 202

Query: 799 EAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVR 858
           E F+R+G  PP G+L++GPPG  KTL+A+AVA+E   +F+ + GPE+ SK+ GESE+ +R
Sbjct: 203 ELFERLGIEPPKGVLLYGPPGTGKTLIAKAVANEVNAHFIPISGPEIMSKYYGESEQRLR 262

Query: 859 SLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIA 918
            +F +AR NAPSIIF DEID +A  R +E  G  V  RV++QLL  +DGL  R  V VI 
Sbjct: 263 EIFEEARENAPSIIFIDEIDSIAPKR-EEVTG-EVERRVVAQLLTLMDGLEARGQVIVIG 320

Query: 919 ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN 968
           ATNRPD IDPAL RPGRFDR + +G P+   R+EI +IH R +P   D N
Sbjct: 321 ATNRPDAIDPALRRPGRFDREIEIGVPDREGRKEILQIHTRGMPIEPDYN 370



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/279 (38%), Positives = 159/279 (56%), Gaps = 45/279 (16%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++   +
Sbjct: 181 IGGLKRELRLVREMIELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLIAKAVANEVNAH 240

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              ++GPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 241 FIPISGPEIMSKYYGESEQRLREIFEEARENAPSIIFIDEIDSIAPKREEVTGEVERRVV 300

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDRE------------------- 572
           A LL LMDG+     V+VI ATNRPD+I+PALRRPGR DRE                   
Sbjct: 301 AQLLTLMDGLEARGQVIVIGATNRPDAIDPALRRPGRFDREIEIGVPDREGRKEILQIHT 360

Query: 573 ----IEIDMSF--LFSLLKN-------------------SPAAVPSPAQRLEILHALLSG 607
               IE D +   +  +LK                      A      + LE   ++ + 
Sbjct: 361 RGMPIEPDYNRDDVIKVLKQLKEEKRFEEKELEELIAKIEKAKEDEIKKILEEKESIFNE 420

Query: 608 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           + + L+D  +E L+  T GFVGADLAAL  EAA+  LR+
Sbjct: 421 VRNRLIDLMLEELADLTVGFVGADLAALAKEAAMHALRK 459



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 133/213 (62%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             ++G++P KG+LL+GPPGTGKT LA+  A++S  N  +V GPE++S+  GESE+ + E+
Sbjct: 539 FKAVGIKPPKGILLYGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREM 598

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q AP V+F DE+D++AP R  GG+  +++R+V+ LL  +DG+     V+VIAATN
Sbjct: 599 FRKARQVAPCVLFFDEIDSLAPRRGTGGDTHVTERVVSQLLTELDGLEELKDVVVIAATN 658

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PAL RPGRL+R I I                P    RLEI      GM    LD
Sbjct: 659 RPDMIDPALLRPGRLERHIYI--------------PPPDEKARLEIFKIHTRGMP---LD 701

Query: 615 SEV--EYLSMATHGFVGADLAALCNEAALVCLR 645
            +V  E L+  T G+ GAD+ A+C EA ++ +R
Sbjct: 702 EDVNLEELAKKTEGYSGADIEAVCREAGMLAIR 734


>gi|19113502|ref|NP_596710.1| ribosome biogenesis factor recycling AAA family ATPase (predicted)
            [Schizosaccharomyces pombe 972h-]
 gi|74676032|sp|O60058.1|AFG2_SCHPO RecName: Full=ATPase family gene 2 protein
 gi|3116137|emb|CAA18886.1| ribosome biogenesis factor recycling AAA family ATPase (predicted)
            [Schizosaccharomyces pombe]
          Length = 809

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/294 (52%), Positives = 207/294 (70%), Gaps = 4/294 (1%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            +++ D E A   VR SAMRE ++E P V W D+GGQ EVK +L E+VEWP  H E F R+
Sbjct: 518  VQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRL 577

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G RPP G+L++GPPGCSKT+ A+A+A+E GLNF+AVKGPELF K+VGESE+AVR +F KA
Sbjct: 578  GVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKA 637

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R  +PS+IFFDEID L A RG+++     SDRV++ LL ELDG+    NV V+AATNRPD
Sbjct: 638  RQASPSVIFFDEIDALTANRGEDNS----SDRVVAALLNELDGIEALRNVLVLAATNRPD 693

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
             IDPAL+RPGR DRLLYVGPPN   R++I +I   K+  + DV++  +A  +EGC+GA++
Sbjct: 694  MIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEV 753

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHS 1038
              +C+EA + A+ E+L+A  I   H KTA+  ++ +      E  A F   V S
Sbjct: 754  VALCQEAGLIAMHEDLEAKEICQAHFKTALLALRKAITRDMLEYYASFSESVTS 807



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/255 (41%), Positives = 156/255 (61%), Gaps = 15/255 (5%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            S +GGL  + A ++DI+ +            + P +GVLL+GPPGTGKT + R  A ++
Sbjct: 278 FSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEA 337

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
              +FT++GP VV +  GE+E  L ++F+ A    P+++FIDE+DA+AP R +   E   
Sbjct: 338 NAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAES 397

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R VATLL L+DG+     V+VIAATNRP+SI+ ALRRPGRL++EIEI             
Sbjct: 398 RAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEI------------- 444

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
             +P  + RL+I+  LLSG+ + + D+++E L+  TH +VGADLAA+  EAAL  ++R  
Sbjct: 445 -GIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTI 503

Query: 649 KIQTSSDVLHSTGTL 663
            +Q  +  L   G +
Sbjct: 504 SLQKDTSGLDIFGAV 518



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 150/265 (56%), Gaps = 13/265 (4%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +  +GG +    Q+ + VE P ++ E FK     PP G+L++GPPG  KT++ RAVA+
Sbjct: 276  VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EA      + GP +  K++GE+E  +R +F  ARA+ PSIIF DEID LA  R +  D  
Sbjct: 336  EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTE--DVS 393

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                R ++ LL  LDG+     V VIAATNRP+ ID AL RPGR ++ + +G P+++ R 
Sbjct: 394  EAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARL 453

Query: 952  EIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR------ 1004
            +I ++ L  +P   +D  + +LA  +    GAD++ + REAA+ AI+  +   +      
Sbjct: 454  DIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKDTSGLD 513

Query: 1005 ----ITMQHLKTAIRHVQPSEIHSY 1025
                + M  L+ A+  V+ S +  +
Sbjct: 514  IFGAVQMDDLEFALSSVRQSAMREF 538



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/210 (43%), Positives = 128/210 (60%), Gaps = 17/210 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T S LG+RP KGVLL+GPPG  KT  A+  A ++G+N   V GPE+  +  GESE+A+ +
Sbjct: 573 TFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQ 632

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           VF  A Q++P+V+F DE+DA+   R  G +  S R+VA LLN +DG+     VLV+AATN
Sbjct: 633 VFQKARQASPSVIFFDEIDALTANR--GEDNSSDRVVAALLNELDGIEALRNVLVLAATN 690

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PAL RPGRLDR           LL   P   P+   R +I+      M+ +  D
Sbjct: 691 RPDMIDPALMRPGRLDR-----------LLYVGP---PNFEARKQIVKIQAEKMKFA-ED 735

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCL 644
            +++ ++  T G  GA++ ALC EA L+ +
Sbjct: 736 VDLDLIAEKTEGCSGAEVVALCQEAGLIAM 765


>gi|337283587|ref|YP_004623061.1| cell division protein CDC48 [Pyrococcus yayanosii CH1]
 gi|334899521|gb|AEH23789.1| cell division protein CDC48 [Pyrococcus yayanosii CH1]
          Length = 796

 Score =  324 bits (831), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 158/311 (50%), Positives = 216/311 (69%), Gaps = 21/311 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++EVP V+W+D+GG  EVK +L EAVEWP KH EAF+
Sbjct: 485  LKVTRKDFYEALKMVEPSALREVLIEVPNVRWDDIGGLEEVKQELREAVEWPLKHSEAFR 544

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G  PP GIL++GPPG  KTL+A+AVA+E+  NF+AV+GPE+ SKWVGESEK +R +F 
Sbjct: 545  AFGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAVRGPEILSKWVGESEKNIREIFR 604

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VIAATNR
Sbjct: 605  KARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRIINQLLTEMDGIVENSGVVVIAATNR 662

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+ V  P+E  R EIFR+H R +P + DVN+ ELA  +EG TGA
Sbjct: 663  PDIIDPALLRPGRFDRLILVPAPDERARLEIFRVHTRNMPLAKDVNLEELAKRTEGYTGA 722

Query: 983  DISLICREAAISAIEENLD---------------ASRITMQHLKTAIRHVQPS----EIH 1023
            DI+ +CREAA+ A+ + L+                +++TM+  + A++ + PS     + 
Sbjct: 723  DIAAVCREAAMIAMRKALEKGIIKEGMKAEEIRKVAKVTMKDFEEALKKIGPSVSKETME 782

Query: 1024 SYKELSAKFQR 1034
             YK +  +F++
Sbjct: 783  YYKRIQEQFKQ 793



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 103/195 (52%), Positives = 140/195 (71%), Gaps = 2/195 (1%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V +ED+GG ++V  ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179 VTYEDIGGLKDVIQKIREMIELPLKHPELFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EA  +F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E+ G 
Sbjct: 239 EANAHFIAINGPEIMSKYYGESEERLRQVFKEAEENAPAIIFIDEIDAIAPKR-EETHG- 296

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V  RV+SQLL  +DGL  R  V VIAATNRPD IDPAL RPGRFDR + VG P++  R+
Sbjct: 297 EVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGRFDREIEVGVPDKQGRK 356

Query: 952 EIFRIHLRKIPCSSD 966
           EI +IH R +P   D
Sbjct: 357 EILQIHTRGMPIEPD 371



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 19/213 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             + G+ P KG+LL+GPPGTGKT LA+  A +S  N   V GPE++S+  GESE+ + E+
Sbjct: 543 FRAFGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAVRGPEILSKWVGESEKNIREI 602

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A Q+AP V+FIDE+DAIAP R      ++ R++  LL  MDG+    GV+VIAATNR
Sbjct: 603 FRKARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRIINQLLTEMDGIVENSGVVVIAATNR 662

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLL 613
           PD I+PAL RPGR DR I                 VP+P +  RLEI       M  +  
Sbjct: 663 PDIIDPALLRPGRFDRLI----------------LVPAPDERARLEIFRVHTRNMPLA-K 705

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           D  +E L+  T G+ GAD+AA+C EAA++ +R+
Sbjct: 706 DVNLEELAKRTEGYTGADIAAVCREAAMIAMRK 738



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 91/197 (46%), Positives = 126/197 (63%), Gaps = 15/197 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      ++++I +          LG+ P KGVLL+GPPGTGKT LA+  A+++  +
Sbjct: 184 IGGLKDVIQKIREMIELPLKHPELFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAH 243

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +NGPE++S+ YGESE+ L +VF  A ++APA++FIDE+DAIAP R++   E+ +R+V
Sbjct: 244 FIAINGPEIMSKYYGESEERLRQVFKEAEENAPAIIFIDEIDAIAPKREETHGEVEKRVV 303

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VIAATNRPD+I+PALRRPGR DREIE+               V
Sbjct: 304 SQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGRFDREIEV--------------GV 349

Query: 592 PSPAQRLEILHALLSGM 608
           P    R EIL     GM
Sbjct: 350 PDKQGRKEILQIHTRGM 366


>gi|195434915|ref|XP_002065447.1| GK14665 [Drosophila willistoni]
 gi|194161532|gb|EDW76433.1| GK14665 [Drosophila willistoni]
          Length = 794

 Score =  324 bits (831), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 142/265 (53%), Positives = 200/265 (75%), Gaps = 1/265 (0%)

Query: 756  KVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMF 815
            +++PSAMREV++E P V W D+GGQ +++  L +A+EWP  H E F+R+G +PP G+LMF
Sbjct: 513  RIKPSAMREVLIECPNVLWSDIGGQSQLRLALQQAIEWPLLHAEKFQRLGIKPPRGLLMF 572

Query: 816  GPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFD 875
            GPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR +F KAR  AP+I+FFD
Sbjct: 573  GPPGCSKTMIAKALATESHLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFD 632

Query: 876  EIDGLAAIRGK-ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            EID +   R + +S G SV +RV++QLL E+DG+    NVT++AATNRPD ID AL+RPG
Sbjct: 633  EIDAIGGERAEGDSSGSSVKERVLTQLLTEMDGVDSLQNVTIVAATNRPDLIDKALMRPG 692

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            R DR++YVG P    R EI RI LR +P + DV+I +L  L++G +GA++  +C EAA+ 
Sbjct: 693  RIDRIIYVGLPQAEARNEILRIKLRSMPLAQDVDIAKLTELTDGYSGAELQAVCHEAALR 752

Query: 995  AIEENLDASRITMQHLKTAIRHVQP 1019
            A+E + +A  +  QH + A++ VQP
Sbjct: 753  ALEHSFEADTVEWQHFEYALKAVQP 777



 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 18/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF  
Sbjct: 561 LGIKPPRGLLMFGPPGCSKTMIAKALATESHLNFLSIKGPELFSMWVGESERAVREVFRK 620

Query: 499 ASQSAPAVVFIDELDAIAPARKDG---GEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q APA+VF DE+DAI   R +G   G  + +R++  LL  MDGV     V ++AATNR
Sbjct: 621 ARQVAPAIVFFDEIDAIGGERAEGDSSGSSVKERVLTQLLTEMDGVDSLQNVTIVAATNR 680

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+ AL RPGR+DR I +               +P    R EIL   L  M  +  D 
Sbjct: 681 PDLIDKALMRPGRIDRIIYV--------------GLPQAEARNEILRIKLRSMPLA-QDV 725

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCL 644
           ++  L+  T G+ GA+L A+C+EAAL  L
Sbjct: 726 DIAKLTELTDGYSGAELQAVCHEAALRAL 754



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 118/215 (54%), Gaps = 27/215 (12%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAH------DSGVNLFTVNGPEVVSQNYGESEQALH 493
           GL+ ++G+L++G  G GK+ + +  A+      +  V L T+   E+ S+  GE+E+ L 
Sbjct: 293 GLKISRGMLIYGSSGCGKSLVLQTMANYAKEQSNGQVKLLTIQSGEIFSKFLGETEKKLS 352

Query: 494 EVFDSASQS--APAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC-----RTDG 546
           ++F  A +    P ++ I+++  + P ++    +L +R+  +LLN +D +      R   
Sbjct: 353 KIFGQAYKHYPQPTLLLIEDIHNLCPKQEASNNDLIKRVSLSLLNQLDQLSSSNNQRAQR 412

Query: 547 VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS 606
             ++A T++ D + P++RR GRLD E+EI                P+P +R  IL  +L 
Sbjct: 413 TFLLATTSQIDGLNPSIRRGGRLDNELEI--------------MPPNPQERASILQKMLE 458

Query: 607 GMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
            ++H+L++ +V+ ++  THG+VGADLA +   A L
Sbjct: 459 NLDHNLVEEDVQKIAAITHGYVGADLAQVIYTAML 493



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 125/230 (54%), Gaps = 19/230 (8%)

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAG------LNFLAVKGPELFSKWVGESEKAVR 858
            G +   G+L++G  GC K+L+ + +A+ A       +  L ++  E+FSK++GE+EK + 
Sbjct: 293  GLKISRGMLIYGSSGCGKSLVLQTMANYAKEQSNGQVKLLTIQSGEIFSKFLGETEKKLS 352

Query: 859  SLFAKARAN--APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGL----HQRV 912
             +F +A  +   P+++  ++I  L     +E+    +  RV   LL +LD L    +QR 
Sbjct: 353  KIFGQAYKHYPQPTLLLIEDIHNLCP--KQEASNNDLIKRVSLSLLNQLDQLSSSNNQRA 410

Query: 913  NVT-VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIR 970
              T ++A T++ D ++P++ R GR D  L + PPN  +R  I +  L  +  +  + +++
Sbjct: 411  QRTFLLATTSQIDGLNPSIRRGGRLDNELEIMPPNPQERASILQKMLENLDHNLVEEDVQ 470

Query: 971  ELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            ++A ++ G  GAD++ +   A + A   N     I ++HL+ AI  ++PS
Sbjct: 471  KIAAITHGYVGADLAQVIYTAMLQAQNTN---EAIYLKHLQLAISRIKPS 517


>gi|338722566|ref|XP_003364565.1| PREDICTED: spermatogenesis-associated protein 5 [Equus caballus]
          Length = 893

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 150/293 (51%), Positives = 212/293 (72%), Gaps = 4/293 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 595  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGVENIKLKLKQAVEWPLKHPESFI 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+A+R +F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAIREIFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  PN   R+EIF +    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPNAATRKEIFNLQFHAMPISNEVDLDELILQTDSYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQP----SEIHSYKELSAK 1031
            +I  +CREAA+  +EE++ A  I  +H   A+  V P    S I  Y++   K
Sbjct: 835  EIIAVCREAALLTLEEDIQARCIMRRHFTQALNTVTPRIPESLIRFYEDYQEK 887



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 161/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+ P +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSIINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQNEVEKRIVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  L+  + H L  +E+  L+ + HG+VGADL AL
Sbjct: 522 --------------GVPNAQDRLDILQKLVRRVPHLLTKAELLQLANSAHGYVGADLKAL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 568 CNEAGLYALRRVLKKQ 583



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 149/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSIINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  R+++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 467  NEVEKRIVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  +R++P   +   + +LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 527  QDRLDILQKLVRRVPHLLTKAELLQLANSAHGYVGADLKALCNEAGLYALRRVLKKQPNL 586

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT+      +  ++PS + 
Sbjct: 587  PDSKVAGLVKITLNDFLQGMNDIRPSAMR 615



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 128/208 (61%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E+F  
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAIREIFRK 715

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 716 ARAVAPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 775

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P+ A R EI +     M  S  + +
Sbjct: 776 DRIDKALMRPGRIDRIIYVPL--------------PNAATRKEIFNLQFHAMPIS-NEVD 820

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 821 LDELILQTDSYSGAEIIAVCREAALLTL 848


>gi|149698244|ref|XP_001502977.1| PREDICTED: spermatogenesis-associated protein 5 isoform 1 [Equus
            caballus]
          Length = 894

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 150/293 (51%), Positives = 212/293 (72%), Gaps = 4/293 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 596  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGVENIKLKLKQAVEWPLKHPESFI 655

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+A+R +F 
Sbjct: 656  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAIREIFR 715

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 716  KARAVAPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 775

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  PN   R+EIF +    +P S++V++ EL   ++  +GA
Sbjct: 776  PDRIDKALMRPGRIDRIIYVPLPNAATRKEIFNLQFHAMPISNEVDLDELILQTDSYSGA 835

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQP----SEIHSYKELSAK 1031
            +I  +CREAA+  +EE++ A  I  +H   A+  V P    S I  Y++   K
Sbjct: 836  EIIAVCREAALLTLEEDIQARCIMRRHFTQALNTVTPRIPESLIRFYEDYQEK 888



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 161/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+ P +GVLL+GPPGTGKT
Sbjct: 345 QDNQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 402

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 403 MIARAVANEVGAYVSIINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 462

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 463 REGAQNEVEKRIVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 522

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  L+  + H L  +E+  L+ + HG+VGADL AL
Sbjct: 523 --------------GVPNAQDRLDILQKLVRRVPHLLTKAELLQLANSAHGYVGADLKAL 568

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 569 CNEAGLYALRRVLKKQ 584



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 149/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 350  KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 409

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 410  NEVGAYVSIINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 467

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  R+++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 468  NEVEKRIVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 527

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  +R++P   +   + +LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 528  QDRLDILQKLVRRVPHLLTKAELLQLANSAHGYVGADLKALCNEAGLYALRRVLKKQPNL 587

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT+      +  ++PS + 
Sbjct: 588  PDSKVAGLVKITLNDFLQGMNDIRPSAMR 616



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 128/208 (61%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E+F  
Sbjct: 657 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAIREIFRK 716

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 717 ARAVAPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 776

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P+ A R EI +     M  S  + +
Sbjct: 777 DRIDKALMRPGRIDRIIYVPL--------------PNAATRKEIFNLQFHAMPIS-NEVD 821

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 822 LDELILQTDSYSGAEIIAVCREAALLTL 849


>gi|383318674|ref|YP_005379515.1| AAA ATPase [Methanocella conradii HZ254]
 gi|379320044|gb|AFC98996.1| AAA family ATPase, CDC48 subfamily [Methanocella conradii HZ254]
          Length = 740

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 162/311 (52%), Positives = 212/311 (68%), Gaps = 18/311 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++ + DFE A   + PSAMREV +EVP V W+D+GG  +VK +L E VEWP K+++ F+
Sbjct: 421  LQIRMADFEDALKNIEPSAMREVFVEVPNVHWDDIGGLEKVKQELRETVEWPLKYKDVFE 480

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
               TR P GIL+FGPPG  KTL+A+AVA+E+  NF++VKGPE+ SKWVGESEKAVR  F 
Sbjct: 481  VTHTRAPKGILVFGPPGTGKTLLAKAVANESEANFISVKGPEVLSKWVGESEKAVRETFR 540

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR +AP+IIFFDEID +A  RG   D   V++RV+SQLL ELDGL +  +V V+AATNR
Sbjct: 541  KARQSAPTIIFFDEIDAIAPTRGGSFDS-HVTERVVSQLLTELDGLEELHSVVVMAATNR 599

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +D ALLRPGR DRLLY+ PP+E  R EIF+IH R  P   DV+   LA  ++   GA
Sbjct: 600  PDMVDTALLRPGRLDRLLYIPPPDERSRAEIFKIHTRGKPLGPDVDFEALAKRTKDYVGA 659

Query: 983  DISLICREAAISAIEENLDAS-------------RITMQHLKTAIRHVQPS----EIHSY 1025
            DI  +CREA++ AI E ++ S             RITM+H + A+R V+PS     + +Y
Sbjct: 660  DIEAVCREASMMAIREYINGSMSPEEAKSKAKDIRITMKHFEAALRKVKPSASRESMKAY 719

Query: 1026 KELSAKFQRLV 1036
            + L+  F R V
Sbjct: 720  ERLAENFARQV 730



 Score =  239 bits (609), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 121/277 (43%), Positives = 180/277 (64%), Gaps = 18/277 (6%)

Query: 758  RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
            +P+A  E +  VP+V +ED+GG +     + E +E P +H E F+++G  PP G+L++GP
Sbjct: 166  KPAA--EKLERVPRVTYEDIGGLKREIGLVREMIELPLRHPELFQKLGIDPPKGVLLYGP 223

Query: 818  PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
            PG  KT++A+AVASE   NF+++ GPE+ SK+ GESEK +R +F  A  NAPSIIF DEI
Sbjct: 224  PGTGKTMIAKAVASETDANFISISGPEIMSKYYGESEKQLRDIFKDAEDNAPSIIFIDEI 283

Query: 878  DGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
            D +A  R +E  G  V  RV++QLL  +DGL  R  V V+AATNRP+ +DPAL R GRFD
Sbjct: 284  DSIAP-RREEVTG-EVERRVVAQLLALMDGLQARGQVIVVAATNRPNAVDPALRRGGRFD 341

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI- 996
            R + +G P++  R EI  +H R +P + DVN+ ++A ++ G  GADI+ +C+EAA+ A+ 
Sbjct: 342  REIEIGVPDKNGRLEILHVHTRGMPLAQDVNLEKIAEVTHGFVGADIASLCKEAAMHALR 401

Query: 997  -------------EENLDASRITMQHLKTAIRHVQPS 1020
                         +E LD  +I M   + A+++++PS
Sbjct: 402  AIMPEIDIEKEIPQEVLDKLQIRMADFEDALKNIEPS 438



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 106/234 (45%), Positives = 154/234 (65%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLL+GPPGTGKT +A+  A ++  N
Sbjct: 183 IGGLKREIGLVREMIELPLRHPELFQKLGIDPPKGVLLYGPPGTGKTMIAKAVASETDAN 242

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE+ L ++F  A  +AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 243 FISISGPEIMSKYYGESEKQLRDIFKDAEDNAPSIIFIDEIDSIAPRREEVTGEVERRVV 302

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+V+AATNRP++++PALRR GR DREIEI               V
Sbjct: 303 AQLLALMDGLQARGQVIVVAATNRPNAVDPALRRGGRFDREIEI--------------GV 348

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEILH    GM  +  D  +E ++  THGFVGAD+A+LC EAA+  LR
Sbjct: 349 PDKNGRLEILHVHTRGMPLA-QDVNLEKIAEVTHGFVGADIASLCKEAAMHALR 401



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 135/239 (56%), Gaps = 21/239 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K    L++ +      K        R  KG+L+ GPPGTGKT LA+  A++S  N
Sbjct: 455 IGGLEKVKQELRETVEWPLKYKDVFEVTHTRAPKGILVFGPPGTGKTLLAKAVANESEAN 514

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG---EELSQ 528
             +V GPEV+S+  GESE+A+ E F  A QSAP ++F DE+DAIAP R  GG     +++
Sbjct: 515 FISVKGPEVLSKWVGESEKAVRETFRKARQSAPTIIFFDEIDAIAPTR--GGSFDSHVTE 572

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V+ LL  +DG+     V+V+AATNRPD ++ AL RPGRLDR           LL   P
Sbjct: 573 RVVSQLLTELDGLEELHSVVVMAATNRPDMVDTALLRPGRLDR-----------LLYIPP 621

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
              P    R EI      G      D + E L+  T  +VGAD+ A+C EA+++ +R Y
Sbjct: 622 ---PDERSRAEIFKIHTRGKPLG-PDVDFEALAKRTKDYVGADIEAVCREASMMAIREY 676


>gi|18313875|ref|NP_560542.1| ATPase AAA [Pyrobaculum aerophilum str. IM2]
 gi|18161441|gb|AAL64724.1| AAA family ATPase, possible cell division control protein cdc48
            [Pyrobaculum aerophilum str. IM2]
          Length = 738

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 152/303 (50%), Positives = 215/303 (70%), Gaps = 9/303 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   V P+ +REVI+EVP+V W+D+GG   +K +L E VEWP K++  F 
Sbjct: 433  LKVGMSDFLEAMKFVHPTVLREVIIEVPEVHWDDIGGYDTIKQELREIVEWPMKYKHYFD 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KTL A+AVA+E+G NF+AV+GPEL SKWVGESEKA+R +F 
Sbjct: 493  ELGVEPPKGILLFGPPGVGKTLFAKAVATESGANFIAVRGPELLSKWVGESEKAIREVFK 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP +IFFDEID +A  RG       V+DR+++QLL E+DG+    NV V+AATNR
Sbjct: 553  KARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDRMVNQLLAEMDGIGTLKNVVVMAATNR 612

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R EIF++H +++  + DVN+ ELA  +EG TGA
Sbjct: 613  PDILDPALLRPGRFDRVIYVPPPDLKARIEIFKVHTKRVKLADDVNLEELAKRTEGYTGA 672

Query: 983  DISLICREAAISAI-----EENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            DI+ + REAA+ A+     E+ + A  ++M+H + A++ + PS    +I  Y+E++ + +
Sbjct: 673  DIAALVREAAMLALRETIREKTVKAKPVSMKHFEEALKRIPPSLTPEDIRRYEEIAKRLR 732

Query: 1034 RLV 1036
            R +
Sbjct: 733  RAI 735



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 116/266 (43%), Positives = 172/266 (64%), Gaps = 15/266 (5%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VR   ++E  L +P+V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ G
Sbjct: 159  VREEPVKEAELTIPRVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIG 218

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DE
Sbjct: 219  PPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDE 278

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRF
Sbjct: 279  IDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQVIVIGATNRPDAVDPALRRPGRF 336

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIP-CSS------------DVNIRELACLSEGCTGAD 983
            DR +++  P++  R EI  +H R +P C+             +V++  +A ++ G TGAD
Sbjct: 337  DREIHIPMPDKRARREILAVHTRNMPLCTKADVETKICNPGDEVDLDRIAEMTHGYTGAD 396

Query: 984  ISLICREAAISAIEENLDASRITMQH 1009
            ++ + +EAA++A+ + ++   I ++ 
Sbjct: 397  LAALAKEAAMTALRKAMNKGMINIEQ 422



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/223 (44%), Positives = 137/223 (61%), Gaps = 26/223 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 203 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 262

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 263 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVIVIGATNR 322

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM------- 608
           PD+++PALRRPGR DREI I M              P    R EIL      M       
Sbjct: 323 PDAVDPALRRPGRFDREIHIPM--------------PDKRARREILAVHTRNMPLCTKAD 368

Query: 609 -EHSLLDS----EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            E  + +     +++ ++  THG+ GADLAAL  EAA+  LR+
Sbjct: 369 VETKICNPGDEVDLDRIAEMTHGYTGADLAALAKEAAMTALRK 411



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/245 (41%), Positives = 138/245 (56%), Gaps = 22/245 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG       L++I+      K     LG+ P KG+LL GPPG GKT  A+  A +SG N
Sbjct: 467 IGGYDTIKQELREIVEWPMKYKHYFDELGVEPPKGILLFGPPGVGKTLFAKAVATESGAN 526

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
              V GPE++S+  GESE+A+ EVF  A  +AP V+F DE+D+IAPAR  + G   ++ R
Sbjct: 527 FIAVRGPELLSKWVGESEKAIREVFKKARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDR 586

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           MV  LL  MDG+     V+V+AATNRPD ++PAL RPGR DR I                
Sbjct: 587 MVNQLLAEMDGIGTLKNVVVMAATNRPDILDPALLRPGRFDRVI---------------- 630

Query: 590 AVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            VP P    R+EI       ++ +  D  +E L+  T G+ GAD+AAL  EAA++ LR  
Sbjct: 631 YVPPPDLKARIEIFKVHTKRVKLA-DDVNLEELAKRTEGYTGADIAALVREAAMLALRET 689

Query: 648 SKIQT 652
            + +T
Sbjct: 690 IREKT 694


>gi|117646480|emb|CAL38707.1| hypothetical protein [synthetic construct]
          Length = 893

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 147/291 (50%), Positives = 210/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 595  VKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 715  KARTVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 835  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 885



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/256 (42%), Positives = 159/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL  MDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQNEVEKRVVASLLTPMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 522 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 568 CNEAGLCALRRILKKQ 583



 Score =  180 bits (457), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 467  NEVEKRVVASLLTPMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 527  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNL 586

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT++    A+  ++PS + 
Sbjct: 587  PDVKVAGLVKITLKDFLQAMNDIRPSAMR 615



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 715

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 716 ARTVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 775

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 776 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 820

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 821 LDELILQTDAYSGAEIVAVCREAALLAL 848


>gi|355721450|gb|AES07266.1| spermatoproteinis associated 5 [Mustela putorius furo]
          Length = 392

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 147/272 (54%), Positives = 207/272 (76%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 120  VKITLNDFLQAMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 179

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 180  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 239

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 240  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGVEQLKDVTILAATNR 299

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF +    +P S+DV++ EL   ++  +GA
Sbjct: 300  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFNLQFHSMPISNDVDLDELILQTDTYSGA 359

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAI 1014
            ++  +CREAA+ A+EE++ A+ IT +H   A+
Sbjct: 360  EVIAVCREAALLALEEDIQANCITRRHFTQAL 391



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 127/208 (61%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E+F  
Sbjct: 181 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRK 240

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDGV +   V ++AATNRP
Sbjct: 241 ARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGVEQLKDVTILAATNRP 300

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI +     M  S  D +
Sbjct: 301 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFNLQFHSMPIS-NDVD 345

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 346 LDELILQTDTYSGAEVIAVCREAALLAL 373



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/122 (49%), Positives = 76/122 (62%), Gaps = 17/122 (13%)

Query: 533 TLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI              
Sbjct: 1   SLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI-------------- 46

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
            VP+ A RL+IL  LL  + H L +SE+  L+   HG+VGADL ALCNEA L  LRR  K
Sbjct: 47  GVPNAADRLDILQKLLQRVPHLLTESELLQLANGAHGYVGADLKALCNEAGLHALRRVLK 106

Query: 650 IQ 651
            Q
Sbjct: 107 KQ 108



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 16/139 (11%)

Query: 901  LLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIH 957
            LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN  DR +I +  
Sbjct: 2    LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKL 61

Query: 958  LRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENLDAS------R 1004
            L+++P   ++  + +LA  + G  GAD+  +C EA + A+      + NL  S      +
Sbjct: 62   LQRVPHLLTESELLQLANGAHGYVGADLKALCNEAGLHALRRVLKKQPNLSDSKMAGLVK 121

Query: 1005 ITMQHLKTAIRHVQPSEIH 1023
            IT+     A+  ++PS + 
Sbjct: 122  ITLNDFLQAMNDIRPSAMR 140


>gi|426247083|ref|XP_004017316.1| PREDICTED: spermatogenesis-associated protein 5 isoform 1 [Ovis
            aries]
          Length = 887

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 210/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   VK +L +AVEWP KH E+F 
Sbjct: 589  VKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFT 648

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 649  QMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 708

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVTV+AATNR
Sbjct: 709  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 768

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P +++V++ EL   ++  +GA
Sbjct: 769  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPINNEVDLNELILQTDTYSGA 828

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 829  EIIAVCREAALLALEEDITANCIMKRHFTQALSAVTPRLPESLRRFYEDYQ 879



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 161/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q  Q  V  D+  +GGL+ +   +++II +         S G+ P +GVLL+GPPGTGKT
Sbjct: 338 QANQLKVTYDM--IGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 395

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 396 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 455

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 456 REGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDGALRRPGRFDKEIEI 515

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL AL
Sbjct: 516 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKAL 561

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 562 CNEAGLHALRRVLRKQ 577



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 152/269 (56%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG      ++ E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 343  KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 402

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 403  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 460

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 461  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDGALRRPGRFDKEIEIGVPNA 520

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  LR++P   ++  + +LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 521  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRKQPNL 580

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT++     +  ++PS + 
Sbjct: 581  PDSKMAGLVKITLKDFLQGMNDIRPSAMR 609



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 131/214 (61%), Gaps = 21/214 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 646 SFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 705

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+AA
Sbjct: 706 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAA 765

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M    
Sbjct: 766 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMP--- 808

Query: 613 LDSEVEY--LSMATHGFVGADLAALCNEAALVCL 644
           +++EV+   L + T  + GA++ A+C EAAL+ L
Sbjct: 809 INNEVDLNELILQTDTYSGAEIIAVCREAALLAL 842


>gi|325968458|ref|YP_004244650.1| ATPase AAA [Vulcanisaeta moutnovskia 768-28]
 gi|323707661|gb|ADY01148.1| AAA family ATPase, CDC48 subfamily [Vulcanisaeta moutnovskia 768-28]
          Length = 737

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 146/278 (52%), Positives = 208/278 (74%), Gaps = 1/278 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + DF +A  ++ PSA+RE+ +E+PKV+W D+GG  EVK +L EA+EWP K+ E F+
Sbjct: 429  IKVSMNDFLEAMREIVPSALREIHIEIPKVRWSDIGGLEEVKQELKEAIEWPLKYPERFR 488

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G RPP GIL+FGPPG  KTL+A+AVA+E+  NF+AV+GPE+ SKW GESE+A+R +F 
Sbjct: 489  KMGIRPPKGILLFGPPGTGKTLLAKAVATESNANFIAVRGPEILSKWFGESERAIREIFK 548

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP +IFFDEID +A  RG   D  ++ DR+++QLL E+DG+ +  NV VIAATNR
Sbjct: 549  KARMAAPCVIFFDEIDAIAPARGYAEDSPAM-DRIVAQLLAEMDGVSRLDNVVVIAATNR 607

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R EI +IH + +P + DV++ ELA ++EG TGA
Sbjct: 608  PDIVDPALLRPGRFDRIIYVPPPDLRARFEILKIHTKNMPLARDVDLEELAKMTEGYTGA 667

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            DI ++ REA + A+ E   A  ++M+H   A++ ++PS
Sbjct: 668  DIEILTREAGLLAMREINGAGEVSMKHFIDAMKKIKPS 705



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 122/278 (43%), Positives = 179/278 (64%), Gaps = 23/278 (8%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            + +P++ WED+G  +E K ++ E VE P KH E F+ +G  PP G+L+ GPPG  KTL+A
Sbjct: 177  INIPRITWEDIGDLKEAKEKIRELVELPLKHPEIFEYLGIEPPKGVLLIGPPGTGKTLLA 236

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+E    F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +
Sbjct: 237  KAVATETNAYFIAINGPEIVSKYYGESEAKLREIFEEAKKNAPAIIFIDEIDAIAPKR-E 295

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  R+++QLL  +DGL +R  V VI ATNRP+ +DPAL RPGRFDR +++ PP+
Sbjct: 296  EVTG-EVEKRIVAQLLTLMDGLQERGQVIVIGATNRPEAVDPALRRPGRFDREIWINPPD 354

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA----------- 995
               R EI ++H R +P + DV++R+LA ++ G TGADI+ + REAA+ A           
Sbjct: 355  TEGRYEILQVHTRNMPLAKDVDLRKLAEVTYGYTGADIAALAREAAMRALRKALQSGILD 414

Query: 996  -------IEENLDASRITMQHLKTAIRHVQPS---EIH 1023
                   I ++L+  +++M     A+R + PS   EIH
Sbjct: 415  VNKEDEEIRKDLEKIKVSMNDFLEAMREIVPSALREIH 452



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/211 (46%), Positives = 134/211 (63%), Gaps = 15/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL GPPGTGKT LA+  A ++      +NGPE+VS+ YGESE  L E+
Sbjct: 211 FEYLGIEPPKGVLLIGPPGTGKTLLAKAVATETNAYFIAINGPEIVSKYYGESEAKLREI 270

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 271 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRIVAQLLTLMDGLQERGQVIVIGATNR 330

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREI I+               P    R EIL      M  +  D 
Sbjct: 331 PEAVDPALRRPGRFDREIWIN--------------PPDTEGRYEILQVHTRNMPLA-KDV 375

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++  L+  T+G+ GAD+AAL  EAA+  LR+
Sbjct: 376 DLRKLAEVTYGYTGADIAALAREAAMRALRK 406



 Score =  181 bits (458), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/241 (44%), Positives = 138/241 (57%), Gaps = 25/241 (10%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL +    LK+ I            +G+RP KG+LL GPPGTGKT LA+  A +S 
Sbjct: 461 SDIGGLEEVKQELKEAIEWPLKYPERFRKMGIRPPKGILLFGPPGTGKTLLAKAVATESN 520

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS-- 527
            N   V GPE++S+ +GESE+A+ E+F  A  +AP V+F DE+DAIAPAR  G  E S  
Sbjct: 521 ANFIAVRGPEILSKWFGESERAIREIFKKARMAAPCVIFFDEIDAIAPAR--GYAEDSPA 578

Query: 528 -QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
             R+VA LL  MDGV R D V+VIAATNRPD ++PAL RPGR DR I             
Sbjct: 579 MDRIVAQLLAEMDGVSRLDNVVVIAATNRPDIVDPALLRPGRFDRII------------- 625

Query: 587 SPAAVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VP P    R EIL      M  +  D ++E L+  T G+ GAD+  L  EA L+ +
Sbjct: 626 ---YVPPPDLRARFEILKIHTKNMPLA-RDVDLEELAKMTEGYTGADIEILTREAGLLAM 681

Query: 645 R 645
           R
Sbjct: 682 R 682


>gi|295444927|ref|NP_001171384.1| spermatogenesis-associated protein 5 [Sus scrofa]
 gi|292485838|gb|ADE28534.1| spermatogenesis associated 5 [Sus scrofa]
          Length = 887

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 147/291 (50%), Positives = 209/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 589  VKITLKDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFT 648

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 649  QMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 708

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL  +DG+ Q  +VT++AATNR
Sbjct: 709  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTXMDGIEQLKDVTILAATNR 768

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF +    +P S +V++ EL   ++  +GA
Sbjct: 769  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFNLQFHSMPISKEVDLNELVLQTDTYSGA 828

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 829  EIIAVCREAALLALEEDIQANCIMKRHFTQALSTVTPRLPESLRRFYEDYQ 879



 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 162/256 (63%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+ P +GVLL+GPPGTGKT
Sbjct: 338 QDNQLKVTYDM--IGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKT 395

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 396 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 455

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 456 REGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 515

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL AL
Sbjct: 516 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKAL 561

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 562 CNEAGLYALRRVLRKQ 577



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 152/269 (56%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG      ++ E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 343  KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVA 402

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 403  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 460

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 461  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 520

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  LR++P   ++  + +LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 521  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLRKQPNL 580

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT++     +  ++PS + 
Sbjct: 581  PDSKVAGLVKITLKDFLQGMNDIRPSAMR 609



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 128/212 (60%), Gaps = 17/212 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 646 SFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 705

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AA
Sbjct: 706 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTXMDGIEQLKDVTILAA 765

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EI +     M  S 
Sbjct: 766 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFNLQFHSMPIS- 810

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            + ++  L + T  + GA++ A+C EAAL+ L
Sbjct: 811 KEVDLNELVLQTDTYSGAEIIAVCREAALLAL 842


>gi|125984252|ref|XP_001355890.1| GA19119 [Drosophila pseudoobscura pseudoobscura]
 gi|54644208|gb|EAL32949.1| GA19119 [Drosophila pseudoobscura pseudoobscura]
          Length = 797

 Score =  323 bits (829), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 150/280 (53%), Positives = 203/280 (72%), Gaps = 5/280 (1%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L+L   ++A + V+PSAMREV++E P V+W D+GGQ E++  + +A+EWP  H E F+R+
Sbjct: 501  LQLRHLQEALISVKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHAEKFQRL 560

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP GILMFGPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR +F KA
Sbjct: 561  GIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKA 620

Query: 865  RANAPSIIFFDEIDGLAAIRG-----KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAA 919
            R  APSI+FFDEID +   R          G SV +RV++QLL ELDG+    NVT++AA
Sbjct: 621  RQVAPSIVFFDEIDAIGGERAEGEGSGSGSGSSVKERVLTQLLTELDGVEALQNVTIVAA 680

Query: 920  TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 979
            TNRPD ID ALLRPGR DR+LYVG P    R EI RI LR +P + DV + +L  L++G 
Sbjct: 681  TNRPDLIDKALLRPGRIDRILYVGLPKADARSEILRIKLRPMPLAKDVEVDKLVELTDGY 740

Query: 980  TGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            +GA+I  +C EAA+ A+E++ DA ++   H + A+  VQP
Sbjct: 741  SGAEIQAVCHEAAMRALEQSFDAEQVDWSHFEHALAAVQP 780



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 122/215 (56%), Gaps = 22/215 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF  
Sbjct: 560 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRK 619

Query: 499 ASQSAPAVVFIDELDAIAPAR-------KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           A Q AP++VF DE+DAI   R          G  + +R++  LL  +DGV     V ++A
Sbjct: 620 ARQVAPSIVFFDEIDAIGGERAEGEGSGSGSGSSVKERVLTQLLTELDGVEALQNVTIVA 679

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+ AL RPGR+DR + +               +P    R EIL   L  M  +
Sbjct: 680 ATNRPDLIDKALLRPGRIDRILYV--------------GLPKADARSEILRIKLRPMPLA 725

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             D EV+ L   T G+ GA++ A+C+EAA+  L +
Sbjct: 726 -KDVEVDKLVELTDGYSGAEIQAVCHEAAMRALEQ 759



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 32/244 (13%)

Query: 412 KLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGK-------TSLARLC 464
           ++GGL K+  ++++ +  +    TL + GL+ ++G+LL+G  G GK       T++A   
Sbjct: 269 QIGGLDKQLQLVEESMEYALGLRTLPA-GLKVSRGMLLYGATGCGKSMVLEAMTAVADDR 327

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA--SQSAPAVVFIDELDAIAPARKDG 522
           +H   V +  +N  EV S+  GE+EQ L  +F+ A      P ++ I+++  + P  K  
Sbjct: 328 SH-RNVQIIRINSGEVYSKFLGETEQNLAAIFERAYAHYPQPTLLLIEDVHNLCP--KQE 384

Query: 523 GEELSQRMVATLLNLMDGV-----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
             ++ +R+    L L+D +      R     ++A +++ D++ P++RR GRLD E+E+  
Sbjct: 385 SNDMVKRVSLAFLALLDQLSSPRQLRGSRTFLLATSSQIDALHPSIRRAGRLDSELEL-- 442

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                        VPSP  R  I+  L+  +EH L   +V  ++  +HG+VGADLA L  
Sbjct: 443 ------------GVPSPLARQAIIECLIQSVEHLLSSEDVGQIATISHGYVGADLANLVY 490

Query: 638 EAAL 641
            A L
Sbjct: 491 TAIL 494



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 118/227 (51%), Gaps = 17/227 (7%)

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEA------GLNFLAVKGPELFSKWVGESEKAVR 858
            G +   G+L++G  GC K+++  A+ + A       +  + +   E++SK++GE+E+ + 
Sbjct: 296  GLKVSRGMLLYGATGCGKSMVLEAMTAVADDRSHRNVQIIRINSGEVYSKFLGETEQNLA 355

Query: 859  SLFAKARAN--APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ-RVNVT 915
            ++F +A A+   P+++  +++  L   + + +D V         LL +L    Q R + T
Sbjct: 356  AIFERAYAHYPQPTLLLIEDVHNLCP-KQESNDMVKRVSLAFLALLDQLSSPRQLRGSRT 414

Query: 916  VIAAT-NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP-CSSDVNIRELA 973
             + AT ++ D + P++ R GR D  L +G P+   R+ I    ++ +    S  ++ ++A
Sbjct: 415  FLLATSSQIDALHPSIRRAGRLDSELELGVPSPLARQAIIECLIQSVEHLLSSEDVGQIA 474

Query: 974  CLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
             +S G  GAD++ +   A + A  + L      ++HL+ A+  V+PS
Sbjct: 475  TISHGYVGADLANLVYTAILQAQPQPLQ-----LRHLQEALISVKPS 516


>gi|195174593|ref|XP_002028057.1| GL19734 [Drosophila persimilis]
 gi|194115788|gb|EDW37831.1| GL19734 [Drosophila persimilis]
          Length = 797

 Score =  323 bits (829), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 150/280 (53%), Positives = 203/280 (72%), Gaps = 5/280 (1%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L+L   ++A + V+PSAMREV++E P V+W D+GGQ E++  + +A+EWP  H E F+R+
Sbjct: 501  LQLRHLQEALISVKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHAEKFQRL 560

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP GILMFGPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR +F KA
Sbjct: 561  GIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKA 620

Query: 865  RANAPSIIFFDEIDGLAAIRG-----KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAA 919
            R  APSI+FFDEID +   R          G SV +RV++QLL ELDG+    NVT++AA
Sbjct: 621  RQVAPSIVFFDEIDAIGGERAEGEGSGSGSGSSVKERVLTQLLTELDGVEALQNVTIVAA 680

Query: 920  TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 979
            TNRPD ID ALLRPGR DR+LYVG P    R EI RI LR +P + DV + +L  L++G 
Sbjct: 681  TNRPDLIDKALLRPGRIDRILYVGLPKADARSEILRIKLRPMPLAKDVEVDKLVELTDGY 740

Query: 980  TGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            +GA+I  +C EAA+ A+E++ DA ++   H + A+  VQP
Sbjct: 741  SGAEIQAVCHEAAMRALEQSFDAEQVDWSHFEHALAAVQP 780



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 122/215 (56%), Gaps = 22/215 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF  
Sbjct: 560 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRK 619

Query: 499 ASQSAPAVVFIDELDAIAPAR-------KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           A Q AP++VF DE+DAI   R          G  + +R++  LL  +DGV     V ++A
Sbjct: 620 ARQVAPSIVFFDEIDAIGGERAEGEGSGSGSGSSVKERVLTQLLTELDGVEALQNVTIVA 679

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+ AL RPGR+DR + +               +P    R EIL   L  M  +
Sbjct: 680 ATNRPDLIDKALLRPGRIDRILYV--------------GLPKADARSEILRIKLRPMPLA 725

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             D EV+ L   T G+ GA++ A+C+EAA+  L +
Sbjct: 726 -KDVEVDKLVELTDGYSGAEIQAVCHEAAMRALEQ 759



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 125/243 (51%), Gaps = 30/243 (12%)

Query: 412 KLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL---CAHDS 468
           ++GGL K+  ++++ +  +    TL + GL+ ++G+LL+G  G GK+ +       A D 
Sbjct: 269 QIGGLDKQLQLVEESMEYALGLRTLPA-GLKVSRGMLLYGATGCGKSMVLEAMSAVADDR 327

Query: 469 ---GVNLFTVNGPEVVSQNYGESEQALHEVFDSA--SQSAPAVVFIDELDAIAPARKDGG 523
               V +  +N  EV S+  GE+EQ L  +F+ A      P ++ I+++  + P  K   
Sbjct: 328 SHRNVQIIRINSGEVYSKFLGETEQNLAAIFERAYAHYPQPTLLLIEDVHNLCP--KQES 385

Query: 524 EELSQRMVATLLNLMDGV-----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
            ++ +R+    L L+D +      R     ++A +++ D++ P++RR GRLD E+E+   
Sbjct: 386 NDMVKRVSLAFLGLLDQLSSPRQLRGSRTFLLATSSQIDALHPSIRRAGRLDSELEL--- 442

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                       VPSP  R  I+  L+  +EH L   +V  ++  +HG+VGADLA L   
Sbjct: 443 -----------GVPSPQARQAIIECLIQSVEHQLSSEDVGQIATISHGYVGADLANLVYT 491

Query: 639 AAL 641
           A L
Sbjct: 492 AIL 494



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 119/227 (52%), Gaps = 17/227 (7%)

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEA------GLNFLAVKGPELFSKWVGESEKAVR 858
            G +   G+L++G  GC K+++  A+++ A       +  + +   E++SK++GE+E+ + 
Sbjct: 296  GLKVSRGMLLYGATGCGKSMVLEAMSAVADDRSHRNVQIIRINSGEVYSKFLGETEQNLA 355

Query: 859  SLFAKARAN--APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ-RVNVT 915
            ++F +A A+   P+++  +++  L   + + +D V         LL +L    Q R + T
Sbjct: 356  AIFERAYAHYPQPTLLLIEDVHNLCP-KQESNDMVKRVSLAFLGLLDQLSSPRQLRGSRT 414

Query: 916  VIAAT-NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELA 973
             + AT ++ D + P++ R GR D  L +G P+   R+ I    ++ +    S  ++ ++A
Sbjct: 415  FLLATSSQIDALHPSIRRAGRLDSELELGVPSPQARQAIIECLIQSVEHQLSSEDVGQIA 474

Query: 974  CLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
             +S G  GAD++ +   A + A  + L      ++HL+ A+  V+PS
Sbjct: 475  TISHGYVGADLANLVYTAILQAQPQPLQ-----LRHLQEALISVKPS 516


>gi|403290385|ref|XP_003936297.1| PREDICTED: spermatogenesis-associated protein 5 [Saimiri boliviensis
            boliviensis]
          Length = 764

 Score =  323 bits (829), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 209/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 466  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 525

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 526  RMGIEPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 585

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 586  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 645

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+E  R EI ++    +P S+DV++ EL   ++  +GA
Sbjct: 646  PDRIDKALMRPGRIDRIIYVPLPDEATRREILKLQFHSMPISNDVDLNELILQTDSYSGA 705

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 706  EIVAVCREAALLALEEDIQANFIMKRHFTQALSIVTPRIPESLRCFYEDYQ 756



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 124/208 (59%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 527 MGIEPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 586

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 587 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 646

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EIL      M  S  D +
Sbjct: 647 DRIDKALMRPGRIDRIIYVPL--------------PDEATRREILKLQFHSMPIS-NDVD 691

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           +  L + T  + GA++ A+C EAAL+ L
Sbjct: 692 LNELILQTDSYSGAEIVAVCREAALLAL 719



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 34/47 (72%)

Query: 504 PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           P+++FIDELDA+ P R+    E+ +R+VA+LL LMDG+     VLV+
Sbjct: 394 PSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSVSIVLVL 440


>gi|426247085|ref|XP_004017317.1| PREDICTED: spermatogenesis-associated protein 5 isoform 2 [Ovis
            aries]
          Length = 895

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 210/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   VK +L +AVEWP KH E+F 
Sbjct: 597  VKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFT 656

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 657  QMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 716

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVTV+AATNR
Sbjct: 717  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 776

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P +++V++ EL   ++  +GA
Sbjct: 777  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPINNEVDLNELILQTDTYSGA 836

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 837  EIIAVCREAALLALEEDITANCIMKRHFTQALSAVTPRLPESLRRFYEDYQ 887



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 161/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q  Q  V  D+  +GGL+ +   +++II +         S G+ P +GVLL+GPPGTGKT
Sbjct: 346 QANQLKVTYDM--IGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 403

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 404 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 463

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 464 REGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDGALRRPGRFDKEIEI 523

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL AL
Sbjct: 524 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKAL 569

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 570 CNEAGLHALRRVLRKQ 585



 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 152/269 (56%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG      ++ E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 351  KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 410

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 411  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 468

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 469  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDGALRRPGRFDKEIEIGVPNA 528

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  LR++P   ++  + +LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 529  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRKQPNL 588

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT++     +  ++PS + 
Sbjct: 589  PDSKMAGLVKITLKDFLQGMNDIRPSAMR 617



 Score =  157 bits (397), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 131/214 (61%), Gaps = 21/214 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 654 SFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 713

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+AA
Sbjct: 714 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAA 773

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M    
Sbjct: 774 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMP--- 816

Query: 613 LDSEVEY--LSMATHGFVGADLAALCNEAALVCL 644
           +++EV+   L + T  + GA++ A+C EAAL+ L
Sbjct: 817 INNEVDLNELILQTDTYSGAEIIAVCREAALLAL 850


>gi|21749742|dbj|BAC03651.1| unnamed protein product [Homo sapiens]
          Length = 893

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 147/291 (50%), Positives = 210/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +A   +RPSA RE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 595  VKITLKDFLQAMNDIRPSATREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 835  EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 885



 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 110/256 (42%), Positives = 159/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 522 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVL 567

Query: 636 CNEAALVCLRRYSKIQ 651
            NEA L  LRR  K Q
Sbjct: 568 YNEAGLCALRRILKKQ 583



 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 99/266 (37%), Positives = 148/266 (55%), Gaps = 18/266 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 467  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++  EA + A+   L      
Sbjct: 527  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLYNEAGLCALRRILKKQPNL 586

Query: 1004 ---------RITMQHLKTAIRHVQPS 1020
                     +IT++    A+  ++PS
Sbjct: 587  PDVKVAGLVKITLKDFLQAMNDIRPS 612



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 715

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 775

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 776 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 820

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 821 LDELILQTDAYSGAEIVAVCREAALLAL 848


>gi|307594201|ref|YP_003900518.1| AAA ATPase [Vulcanisaeta distributa DSM 14429]
 gi|307549402|gb|ADN49467.1| AAA family ATPase, CDC48 subfamily [Vulcanisaeta distributa DSM
            14429]
          Length = 737

 Score =  323 bits (828), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 146/278 (52%), Positives = 208/278 (74%), Gaps = 1/278 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + DF +A  ++ PSA+RE+ +E+PKV+W D+GG  EVK +L EA+EWP K+ E F+
Sbjct: 429  IKVTMNDFLEAMREIVPSALREIHIEIPKVRWSDIGGLEEVKQELREAIEWPLKYPERFR 488

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G +PP GIL+FGPPG  KTL+A+AVA+E+  NF+AV+GPE+ SKW GESE+A+R +F 
Sbjct: 489  KMGIKPPKGILLFGPPGTGKTLLAKAVATESNANFIAVRGPEILSKWFGESERAIREIFK 548

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP +IFFDEID +A  RG   D  ++ DR+++QLL E+DG+ +  NV VIAATNR
Sbjct: 549  KARMAAPCVIFFDEIDAIAPARGYAEDSPAM-DRIVAQLLAEMDGVSRLDNVVVIAATNR 607

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R EI +IH + +P + DV++ ELA ++EG TGA
Sbjct: 608  PDIVDPALLRPGRFDRIIYVPPPDLRARFEILKIHTKNMPLAKDVDLMELAKMTEGYTGA 667

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            DI L+ REA + A+ E   A  ++M+H   A++ ++PS
Sbjct: 668  DIELLAREAGLLAMREVNGAGEVSMKHFIEAMKKIKPS 705



 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 124/276 (44%), Positives = 178/276 (64%), Gaps = 23/276 (8%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P+V WED+G  +E K ++ E VE P KH E F+ +G  PP G+L+ GPPG  KTL+A+A
Sbjct: 179  IPRVTWEDIGDLKEAKEKIRELVELPLKHPEIFEYLGIEPPKGVLLIGPPGTGKTLLAKA 238

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E    F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +E 
Sbjct: 239  VATETNAYFIAINGPEIVSKYYGESEAKLREIFEEAKKNAPAIIFIDEIDAIAPKR-EEV 297

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  R+++QLL  +DGL +R  V VI ATNRP+ +DPAL RPGRFDR +++ PP+  
Sbjct: 298  TG-EVEKRIVAQLLTLMDGLQERGQVIVIGATNRPEAVDPALRRPGRFDREIWINPPDTE 356

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA------------- 995
             R EI ++H R +P + DV++R+LA ++ G TGADI+ + REAA+ A             
Sbjct: 357  GRYEILQVHTRNMPLAKDVDLRKLAEITYGYTGADIAALAREAAMRALRKALQSGILDVN 416

Query: 996  -----IEENLDASRITMQHLKTAIRHVQPS---EIH 1023
                 I ++L+  ++TM     A+R + PS   EIH
Sbjct: 417  KEDEEIRKDLEKIKVTMNDFLEAMREIVPSALREIH 452



 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 99/211 (46%), Positives = 134/211 (63%), Gaps = 15/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL GPPGTGKT LA+  A ++      +NGPE+VS+ YGESE  L E+
Sbjct: 211 FEYLGIEPPKGVLLIGPPGTGKTLLAKAVATETNAYFIAINGPEIVSKYYGESEAKLREI 270

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 271 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRIVAQLLTLMDGLQERGQVIVIGATNR 330

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREI I+               P    R EIL      M  +  D 
Sbjct: 331 PEAVDPALRRPGRFDREIWIN--------------PPDTEGRYEILQVHTRNMPLA-KDV 375

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++  L+  T+G+ GAD+AAL  EAA+  LR+
Sbjct: 376 DLRKLAEITYGYTGADIAALAREAAMRALRK 406



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/241 (43%), Positives = 137/241 (56%), Gaps = 25/241 (10%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL +    L++ I            +G++P KG+LL GPPGTGKT LA+  A +S 
Sbjct: 461 SDIGGLEEVKQELREAIEWPLKYPERFRKMGIKPPKGILLFGPPGTGKTLLAKAVATESN 520

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS-- 527
            N   V GPE++S+ +GESE+A+ E+F  A  +AP V+F DE+DAIAPAR  G  E S  
Sbjct: 521 ANFIAVRGPEILSKWFGESERAIREIFKKARMAAPCVIFFDEIDAIAPAR--GYAEDSPA 578

Query: 528 -QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
             R+VA LL  MDGV R D V+VIAATNRPD ++PAL RPGR DR I             
Sbjct: 579 MDRIVAQLLAEMDGVSRLDNVVVIAATNRPDIVDPALLRPGRFDRII------------- 625

Query: 587 SPAAVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VP P    R EIL      M  +  D ++  L+  T G+ GAD+  L  EA L+ +
Sbjct: 626 ---YVPPPDLRARFEILKIHTKNMPLA-KDVDLMELAKMTEGYTGADIELLAREAGLLAM 681

Query: 645 R 645
           R
Sbjct: 682 R 682


>gi|296242724|ref|YP_003650211.1| CDC48 subfamily AAA family ATPase [Thermosphaera aggregans DSM 11486]
 gi|296095308|gb|ADG91259.1| AAA family ATPase, CDC48 subfamily [Thermosphaera aggregans DSM
            11486]
          Length = 740

 Score =  323 bits (827), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 148/278 (53%), Positives = 208/278 (74%), Gaps = 1/278 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+   DF  A   + PS +RE+ +EVP+V+W D+GG  EVK  L E+VEWP +  E F+
Sbjct: 433  VKVTFDDFMFAYKSIVPSGLREIYVEVPEVRWGDIGGLHEVKQALKESVEWPLRMPEVFE 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            + G +PP GIL++GPPGC KTL+A+AVA+E+G NF+AV+G E+ SKWVGESE+AVR +F 
Sbjct: 493  KFGIKPPKGILLYGPPGCGKTLLAKAVATESGANFIAVRGAEIMSKWVGESERAVREIFR 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR +AP+++FFDEID +A++RG E D   VS+RV++QL+ E+DG+ +  NV VIAATNR
Sbjct: 553  KARLHAPTVVFFDEIDAIASLRGVELDS-GVSERVVTQLITEMDGIQKLENVVVIAATNR 611

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGR ++L+YV PP+   R EI RI  R+IP S DV++R++A  +EG +GA
Sbjct: 612  PDLIDPALLRPGRLEKLIYVPPPDYDARLEILRILTRRIPLSRDVDLRDIARRTEGYSGA 671

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            D+  + REA +SA+ E+L  S I+M+H   A+  ++PS
Sbjct: 672  DVEAVVREAVMSALRESLSTSEISMKHFNRALEIIKPS 709



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/278 (41%), Positives = 172/278 (61%), Gaps = 23/278 (8%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E + EVP++ +ED+GG   V  ++ E VE P K+++ F+++   PP GIL++GPPG  KT
Sbjct: 175  EPVGEVPRITYEDIGGLGNVIEKIREMVELPLKYRKVFRKLNIDPPKGILLYGPPGTGKT 234

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA---PSIIFFDEIDGL 880
            L+A+A+A+EA   F+ + GPE+ SK+ GESE+ +R +F  AR  A   P+IIF DE+D +
Sbjct: 235  LLAKALANEANAYFIVINGPEIMSKYYGESEQRLREIFKLARKKAKKNPAIIFIDELDAI 294

Query: 881  AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLL 940
            A  R  +     V  RV++QLL  LDGL  R NV VIAATNRP+ +DPAL RPGRFDR +
Sbjct: 295  APKR--DEVVGEVERRVVAQLLALLDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREI 352

Query: 941  YVGPPNETDREEIFRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAISAI 996
             +  P++  R EI +IH R++  S     DV++ +LA ++ G TGAD++ + +EA + A+
Sbjct: 353  EIPMPDKKGRLEILQIHTRRLVKSGILGEDVDLVKLAEMTHGYTGADLAALVKEAVLHAL 412

Query: 997  --------------EENLDASRITMQHLKTAIRHVQPS 1020
                          EE L+  ++T      A + + PS
Sbjct: 413  RRHVPLEKSNPPTPEEVLEKVKVTFDDFMFAYKSIVPS 450



 Score =  190 bits (482), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/265 (42%), Positives = 158/265 (59%), Gaps = 26/265 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      +++++ +    +     L + P KG+LL+GPPGTGKT LA+  A+++   
Sbjct: 188 IGGLGNVIEKIREMVELPLKYRKVFRKLNIDPPKGILLYGPPGTGKTLLAKALANEANAY 247

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSA---PAVVFIDELDAIAPARKDGGEELSQ 528
              +NGPE++S+ YGESEQ L E+F  A + A   PA++FIDELDAIAP R +   E+ +
Sbjct: 248 FIVINGPEIMSKYYGESEQRLREIFKLARKKAKKNPAIIFIDELDAIAPKRDEVVGEVER 307

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+VA LL L+DG+     V+VIAATNRP++++PALRRPGR DREIEI M           
Sbjct: 308 RVVAQLLALLDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPM----------- 356

Query: 589 AAVPSPAQRLEILHALLSGMEHS-LLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
              P    RLEIL      +  S +L  +V+ + +A  THG+ GADLAAL  EA L  LR
Sbjct: 357 ---PDKKGRLEILQIHTRRLVKSGILGEDVDLVKLAEMTHGYTGADLAALVKEAVLHALR 413

Query: 646 RYSKIQ-----TSSDVLHSTGTLFE 665
           R+  ++     T  +VL      F+
Sbjct: 414 RHVPLEKSNPPTPEEVLEKVKVTFD 438



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 136/239 (56%), Gaps = 25/239 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    LK+ +     +       G++P KG+LL+GPPG GKT LA+  A +SG N
Sbjct: 467 IGGLHEVKQALKESVEWPLRMPEVFEKFGIKPPKGILLYGPPGCGKTLLAKAVATESGAN 526

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK---DGGEELSQ 528
              V G E++S+  GESE+A+ E+F  A   AP VVF DE+DAIA  R    D G  +S+
Sbjct: 527 FIAVRGAEIMSKWVGESERAVREIFRKARLHAPTVVFFDEIDAIASLRGVELDSG--VSE 584

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V  L+  MDG+ + + V+VIAATNRPD I+PAL RPGRL++ I               
Sbjct: 585 RVVTQLITEMDGIQKLENVVVIAATNRPDLIDPALLRPGRLEKLI--------------- 629

Query: 589 AAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             VP P    RLEIL  L   +  S  D ++  ++  T G+ GAD+ A+  EA +  LR
Sbjct: 630 -YVPPPDYDARLEILRILTRRIPLS-RDVDLRDIARRTEGYSGADVEAVVREAVMSALR 686


>gi|351714490|gb|EHB17409.1| Spermatogenesis-associated protein 5 [Heterocephalus glaber]
          Length = 886

 Score =  323 bits (827), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 208/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 588  VKITLNDFLQGMNGIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 647

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFL++KGPEL +K+VGESE+AVR +F 
Sbjct: 648  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLSIKGPELMNKYVGESERAVREIFR 707

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 708  KARAVAPSIIFFDELDALAVERGSSPGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 767

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EIF +    +P S++V + EL   +   +GA
Sbjct: 768  PDRIDKALMRPGRIDRIIYVPLPDAATRREIFNLQFHSMPISNEVELDELILQTHTYSGA 827

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  ICREAA+ A+EEN+ A+ I  +H   A+  V P    S +     +Q
Sbjct: 828  EIIAICREAALLALEENIKANCIMKKHFTQALSIVTPRIPESLRRFYEDYQ 878



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/256 (42%), Positives = 160/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q  Q  V  D+  +GGL+ +   ++++I +         S G+   +GVLL+GPPGTGKT
Sbjct: 337 QENQFKVTYDM--IGGLNSQLKAIREMIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 394

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +A+  A++ G ++  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 395 MIAKAIANEVGAHVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 454

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG     ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 455 REGAQNEVEKRVVASLLTLMDGFGSEASEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 514

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + HSL  +E+  L+ + HG+VGADL AL
Sbjct: 515 --------------GVPNAQDRLDILQKLLQRVPHSLTKTELLQLANSAHGYVGADLKAL 560

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 561 CNEAGLCALRRVLRKQ 576



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 136/234 (58%), Gaps = 6/234 (2%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++A+A+A
Sbjct: 342  KVTYDMIGGLNSQLKAIREMIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIAKAIA 401

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G +   + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 402  NEVGAHVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 459

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG     +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 460  NEVEKRVVASLLTLMDGFGSEASEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGVPNA 519

Query: 948  TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             DR +I +  L+++P S +   + +LA  + G  GAD+  +C EA + A+   L
Sbjct: 520  QDRLDILQKLLQRVPHSLTKTELLQLANSAHGYVGADLKALCNEAGLCALRRVL 573



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 129/208 (62%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N  ++ GPE++++  GESE+A+ E+F  
Sbjct: 649 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLSIKGPELMNKYVGESERAVREIFRK 708

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 709 ARAVAPSIIFFDELDALAVERGSSPGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 768

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI +     M  S  + E
Sbjct: 769 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFNLQFHSMPIS-NEVE 813

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + TH + GA++ A+C EAAL+ L
Sbjct: 814 LDELILQTHTYSGAEIIAICREAALLAL 841


>gi|194861081|ref|XP_001969711.1| GG10242 [Drosophila erecta]
 gi|190661578|gb|EDV58770.1| GG10242 [Drosophila erecta]
          Length = 799

 Score =  323 bits (827), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 145/278 (52%), Positives = 203/278 (73%), Gaps = 3/278 (1%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L+++  + A  +++PSAMREV++E P V+W D+GGQ E++  + +A+EWP  H + F+R+
Sbjct: 505  LQMLHLQAALTRIKPSAMREVLIESPNVRWSDIGGQAELRLAMQQAIEWPLLHADKFQRL 564

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP GILMFGPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR +F KA
Sbjct: 565  GIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKA 624

Query: 865  RANAPSIIFFDEIDGLAAIRGK---ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            R  AP+I+FFDEID +   R +      G SV +RV++QLL ELDG+    NVT++AATN
Sbjct: 625  RQVAPAIVFFDEIDAIGGERSEGEGSGSGASVKERVLTQLLTELDGVETLQNVTIVAATN 684

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR+LYVG P    R EI RI LR +P S+DV++  L  L+EG +G
Sbjct: 685  RPDMIDKALLRPGRIDRILYVGLPQCEARREILRIKLRAMPTSNDVDMERLVQLTEGYSG 744

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            A+I  +C EAA+ A+E++ +A  +     + A++ V P
Sbjct: 745  AEIQAVCHEAALRALEQSFEAEDVKWTDFEHALKAVPP 782



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 124/213 (58%), Gaps = 20/213 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF  
Sbjct: 564 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRK 623

Query: 499 ASQSAPAVVFIDELDAIAPARKDG-----GEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           A Q APA+VF DE+DAI   R +G     G  + +R++  LL  +DGV     V ++AAT
Sbjct: 624 ARQVAPAIVFFDEIDAIGGERSEGEGSGSGASVKERVLTQLLTELDGVETLQNVTIVAAT 683

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+ AL RPGR+DR + +               +P    R EIL   L  M  S  
Sbjct: 684 NRPDMIDKALLRPGRIDRILYV--------------GLPQCEARREILRIKLRAMPTS-N 728

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           D ++E L   T G+ GA++ A+C+EAAL  L +
Sbjct: 729 DVDMERLVQLTEGYSGAEIQAVCHEAALRALEQ 761



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 129/244 (52%), Gaps = 30/244 (12%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTS-LARLCA---- 465
           SK+GGL ++  ++++ +  +    TL + GLR ++G+LL+G  G GK+  L  +CA    
Sbjct: 272 SKIGGLDRQLQLVEESMEYALGFRTLPA-GLRVSRGLLLYGATGCGKSMVLEAMCAVAEE 330

Query: 466 -HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS--APAVVFIDELDAIAPARKDG 522
                V L  +N  EV S+  GE+EQ L  +F+ A      P ++ I+++  + P  K  
Sbjct: 331 RSQVHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHFPHPTLLLIEDVHNLCP--KQE 388

Query: 523 GEELSQRMVATLLNLMDGV-----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
             +L +R+    L+L+D +      +     V+A +++ D++ P++RR GRLD E+E+  
Sbjct: 389 SSDLVKRVSLAFLSLLDQLSNPSQLKGSKTFVLATSSQIDALHPSIRRAGRLDTEVEL-- 446

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                         PS   RLEIL  L+  MEH L   EV +++  THG+VGADLA L  
Sbjct: 447 ------------GAPSSQARLEILGCLMQSMEHQLSAEEVGHVASITHGYVGADLANLVY 494

Query: 638 EAAL 641
            A L
Sbjct: 495 AAML 498



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 123/249 (49%), Gaps = 25/249 (10%)

Query: 788  MEAVEWPQKHQEAFKRI--GTRPPTGILMFGPPGCSKTLMARAVA------SEAGLNFLA 839
            ++ VE   ++   F+ +  G R   G+L++G  GC K+++  A+       S+  +  + 
Sbjct: 281  LQLVEESMEYALGFRTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQVHVQLIR 340

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARAN--APSIIFFDEIDGLAAIRGKESDGVSVSDRV 897
            +   E++SK++GE+E+ + ++F +A  +   P+++  +++  L   + + SD V    RV
Sbjct: 341  INSGEVYSKFLGETEQKLGAIFERAYNHFPHPTLLLIEDVHNLCP-KQESSDLVK---RV 396

Query: 898  MSQLLVELDGLHQRVNVT-----VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
                L  LD L     +      V+A +++ D + P++ R GR D  + +G P+   R E
Sbjct: 397  SLAFLSLLDQLSNPSQLKGSKTFVLATSSQIDALHPSIRRAGRLDTEVELGAPSSQARLE 456

Query: 953  IFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            I    ++ +    S   +  +A ++ G  GAD++ +   A + A       + + M HL+
Sbjct: 457  ILGCLMQSMEHQLSAEEVGHVASITHGYVGADLANLVYAAMLQA-----QPNPLQMLHLQ 511

Query: 1012 TAIRHVQPS 1020
             A+  ++PS
Sbjct: 512  AALTRIKPS 520


>gi|440902769|gb|ELR53518.1| Spermatogenesis-associated protein 5, partial [Bos grunniens mutus]
          Length = 839

 Score =  323 bits (827), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 147/291 (50%), Positives = 210/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   VK +L +AVEWP KH E+F 
Sbjct: 541  VKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFT 600

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 601  QMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 660

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVT++AATNR
Sbjct: 661  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNR 720

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P +++V++ EL   ++  +GA
Sbjct: 721  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPINNEVDLNELILQTDTYSGA 780

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ +  +H   A+  V P    S +     +Q
Sbjct: 781  EIIAVCREAALLALEEDITANCVMKRHFTQALSTVTPRLPESLRRFYEDYQ 831



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 161/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q  Q  V  D+  +GGL+ +   +++II +         S G+ P +GVLL+GPPGTGKT
Sbjct: 290 QANQLKVTYDM--IGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 347

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 348 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 407

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 408 REGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 467

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL AL
Sbjct: 468 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKAL 513

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 514 CNEAGLNALRRVLRRQ 529



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 153/269 (56%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG      ++ E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 295  KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 354

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 355  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 412

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 413  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 472

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  LR++P   ++  + +LA  + G  GAD+  +C EA ++A+      + NL
Sbjct: 473  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLNALRRVLRRQPNL 532

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT++     +  ++PS + 
Sbjct: 533  PDSKMAGLVKITLKDFLQGMNDIRPSAMR 561



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 131/214 (61%), Gaps = 21/214 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 598 SFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 657

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AA
Sbjct: 658 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAA 717

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M    
Sbjct: 718 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMP--- 760

Query: 613 LDSEVEY--LSMATHGFVGADLAALCNEAALVCL 644
           +++EV+   L + T  + GA++ A+C EAAL+ L
Sbjct: 761 INNEVDLNELILQTDTYSGAEIIAVCREAALLAL 794


>gi|326918945|ref|XP_003205745.1| PREDICTED: spermatogenesis-associated protein 5-like [Meleagris
            gallopavo]
          Length = 870

 Score =  323 bits (827), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 149/286 (52%), Positives = 210/286 (73%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +    VRPSAMREV ++VPK+ W D+GG  +VK +L +AVEWP KH ++F R+G +P
Sbjct: 578  DFLQGMKDVRPSAMREVAVDVPKISWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQP 637

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPGCSKT++A+A+A E+GLNFLAVKGPEL +K+VGESE+AVR +F KAR  +
Sbjct: 638  PKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVS 697

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSI+FFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VTV+AATNRPD ID 
Sbjct: 698  PSILFFDEMDALAVERGNSSGAGNVADRVLAQLLTEMDGIEQLKDVTVLAATNRPDMIDK 757

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR++YV  P+   R EIF++H R +P S ++ + EL   +   +GA+I+ +C
Sbjct: 758  ALLRPGRIDRIIYVPLPDAATRGEIFKLHFRSMPISEEICLAELVQHTHKYSGAEITAVC 817

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            REAA+ A++E+++A  I  +H + A+  V P    S  +  A +Q+
Sbjct: 818  REAALLALQEDINAKCILGRHFRDALMVVTPRIPDSLIQFYADYQQ 863



 Score =  201 bits (512), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/263 (41%), Positives = 161/263 (61%), Gaps = 26/263 (9%)

Query: 396 QIEFQNVQATVEQD--------ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKG 446
           +I F + +  V +D           +GGLS +   +++++ +         S G+ P +G
Sbjct: 307 RISFIDTRTNVAEDSDHGPQVTYDMIGGLSSQLRTIREMVELPLKQAELFKSYGISPPRG 366

Query: 447 VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 506
           VLL+GPPGTGKT +A+  A++ G ++  +NGPE++S+ YGESE  L ++F  AS   P++
Sbjct: 367 VLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSI 426

Query: 507 VFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCR--TDGVLVI-AATNRPDSIEPAL 563
           +FIDELDA+ P R+    E+ +R+VA+LL LMDG+    ++G LV+  ATNRP  ++ AL
Sbjct: 427 IFIDELDALCPKREGAQNEVEKRIVASLLTLMDGIGSEGSEGQLVVLGATNRPHVLDAAL 486

Query: 564 RRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA 623
           RRPGR D+EIEI               +P+   RL+IL  LL  + HSL  +E+  L+ +
Sbjct: 487 RRPGRFDKEIEI--------------GIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADS 532

Query: 624 THGFVGADLAALCNEAALVCLRR 646
            HG+VGADLAALC EA L  LRR
Sbjct: 533 AHGYVGADLAALCKEAGLYALRR 555



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/235 (40%), Positives = 141/235 (60%), Gaps = 6/235 (2%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V ++ +GG       + E VE P K  E FK  G  PP G+L++GPPG  KTL+A+A+
Sbjct: 325  PQVTYDMIGGLSSQLRTIREMVELPLKQAELFKSYGISPPRGVLLYGPPGTGKTLIAKAI 384

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E G +   + GPE+ SK+ GESE  +R +FA+A    PSIIF DE+D L   R  E  
Sbjct: 385  ANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKR--EGA 442

Query: 890  GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
               V  R+++ LL  +DG+    +   + V+ ATNRP  +D AL RPGRFD+ + +G PN
Sbjct: 443  QNEVEKRIVASLLTLMDGIGSEGSEGQLVVLGATNRPHVLDAALRRPGRFDKEIEIGIPN 502

Query: 947  ETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
              DR +I +  L+K+P S +   + +LA  + G  GAD++ +C+EA + A+   L
Sbjct: 503  AQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYALRRAL 557



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 23/212 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  AH+SG+N   V GPE++++  GESE+A+ E+F  
Sbjct: 633 MGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRK 692

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   +P+++F DE+DA+A  R +  G   ++ R++A LL  MDG+ +   V V+AATNRP
Sbjct: 693 ARMVSPSILFFDEMDALAVERGNSSGAGNVADRVLAQLLTEMDGIEQLKDVTVLAATNRP 752

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM---EHSLL 613
           D I+ AL RPGR+DR I + +              P  A R EI       M   E   L
Sbjct: 753 DMIDKALLRPGRIDRIIYVPL--------------PDAATRGEIFKLHFRSMPISEEICL 798

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              V++    TH + GA++ A+C EAAL+ L+
Sbjct: 799 AELVQH----THKYSGAEITAVCREAALLALQ 826


>gi|354489314|ref|XP_003506809.1| PREDICTED: spermatogenesis-associated protein 5 [Cricetulus griseus]
 gi|344248065|gb|EGW04169.1| Spermatogenesis-associated protein 5 [Cricetulus griseus]
          Length = 893

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 208/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH ++F 
Sbjct: 595  VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFI 654

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 655  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 714

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S    V+DRV++QLL E+DG+ Q  +VTV+AATNR
Sbjct: 715  KARAVAPSIIFFDELDALAVERGSSSGAGDVADRVLAQLLTEMDGIEQLKDVTVLAATNR 774

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P S++V++ EL   ++  +GA
Sbjct: 775  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGA 834

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +C+EAA+ A+EE++ A RI  +H   A+  V P    S       +Q
Sbjct: 835  EIIAVCKEAALLALEEDIKADRIMKRHFTQALSIVTPRIPESLMRFYEDYQ 885



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/256 (42%), Positives = 159/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGL+ +   +++II +         S G+   +G+LL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 402 MIARAVANEVGAFVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L  +E+  L+   HG+VGADL AL
Sbjct: 522 --------------GVPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKAL 567

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 568 CNEAGLYALRRVLRKQ 583



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 147/269 (54%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 349  KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 408

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 409  NEVGAFVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 467  NEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGVPNA 526

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  LR++P   +   +  LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 527  QDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRRVLRKQPNL 586

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT+      +  ++PS + 
Sbjct: 587  PDSKVAGMVKITLNDFLQGMNDIRPSAMR 615



 Score =  157 bits (397), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 129/208 (62%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E+F  
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRK 715

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G  +++ R++A LL  MDG+ +   V V+AATNRP
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSSSGAGDVADRVLAQLLTEMDGIEQLKDVTVLAATNRP 775

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EIL+     M  S  + +
Sbjct: 776 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMPIS-NEVD 820

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L + T  + GA++ A+C EAAL+ L
Sbjct: 821 LDELVLQTDTYSGAEIIAVCKEAALLAL 848


>gi|359074535|ref|XP_002694445.2| PREDICTED: spermatogenesis-associated protein 5, partial [Bos taurus]
          Length = 912

 Score =  322 bits (825), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 147/291 (50%), Positives = 210/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   VK +L +AVEWP KH E+F 
Sbjct: 614  VKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFT 673

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 674  QMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 733

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVT++AATNR
Sbjct: 734  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNR 793

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P +++V++ EL   ++  +GA
Sbjct: 794  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPINNEVDLNELILQTDTYSGA 853

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ +  +H   A+  V P    S +     +Q
Sbjct: 854  EIIAVCREAALLALEEDITANCVMKRHFTQALSTVTPRLPESLRRFYEDYQ 904



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 161/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q  Q  V  D+  +GGL+ +   +++II +         S G+ P +GVLL+GPPGTGKT
Sbjct: 363 QANQLKVTYDM--IGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 420

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 421 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 480

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 481 REGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 540

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL AL
Sbjct: 541 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKAL 586

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 587 CNEAGLHALRRVLRRQ 602



 Score =  179 bits (454), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 152/269 (56%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG      ++ E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 368  KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 427

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 428  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 485

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 486  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 545

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  LR++P   ++  + +LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 546  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRRQPNL 605

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT++     +  ++PS + 
Sbjct: 606  PDSKMAGLVKITLKDFLQGMNDIRPSAMR 634



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 131/214 (61%), Gaps = 21/214 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 671 SFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 730

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AA
Sbjct: 731 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAA 790

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M    
Sbjct: 791 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMP--- 833

Query: 613 LDSEVEY--LSMATHGFVGADLAALCNEAALVCL 644
           +++EV+   L + T  + GA++ A+C EAAL+ L
Sbjct: 834 INNEVDLNELILQTDTYSGAEIIAVCREAALLAL 867


>gi|302348206|ref|YP_003815844.1| Cell division control protein 48, AAA family [Acidilobus
            saccharovorans 345-15]
 gi|302328618|gb|ADL18813.1| Cell division control protein 48, AAA family [Acidilobus
            saccharovorans 345-15]
          Length = 740

 Score =  322 bits (825), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 142/272 (52%), Positives = 206/272 (75%), Gaps = 1/272 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PS +RE+ +EVP+V W D+GG  +VK +L E VEWP K+  +F R+G  P
Sbjct: 437  DFLAAFKEVTPSGLREIEVEVPEVHWSDIGGLEDVKQELREIVEWPLKYPNSFSRLGIEP 496

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+FGPPG  KT++A+AVA+E+G NF+A++GPE+ SKWVGESEKA+R +F KAR  A
Sbjct: 497  PKGVLLFGPPGTGKTMLAKAVATESGANFIAIRGPEVLSKWVGESEKAIREIFKKARQYA 556

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEI+ +A++RG E D  +V +R++SQLL E+DG+    NV VIAATNRPD +DP
Sbjct: 557  PAVVFFDEIESIASLRGTEEDS-NVGERIVSQLLTEIDGITNLENVVVIAATNRPDLVDP 615

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRF++L+YV PP+E  R EI +IH R +P + DV++ ELA ++ G TGAD++ + 
Sbjct: 616  ALLRPGRFEKLIYVPPPDEKGRLEILKIHTRNVPLAEDVDLAELAKMTNGYTGADLAALV 675

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAA++A+ E++++  +  +H + A+  V+PS
Sbjct: 676  REAALTALREDINSPIVKFKHFEQALNKVRPS 707



 Score =  239 bits (610), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 124/266 (46%), Positives = 174/266 (65%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            PKV +ED+GG  EV  ++ E VE P +H E F R+G  PP G+L++GPPG  KTL+A+AV
Sbjct: 185  PKVTYEDIGGLHEVIARIRELVELPLRHPELFSRLGIEPPKGVLLYGPPGTGKTLLAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E+   F+A+ GPE+ SK+ GESE+ +R +F +A+ NAP+IIF DEID +A  R  E  
Sbjct: 245  ATESDAYFVAINGPEIMSKFYGESEQRLREIFEEAKKNAPAIIFIDEIDAIAPKR-DEVI 303

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R  V VI ATNRP+ IDPAL RPGRFDR + V  P++  
Sbjct: 304  G-EVERRVVAQLLALMDGLEGRGQVIVIGATNRPNAIDPALRRPGRFDREIEVPVPDKQG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDASR 1004
            R EI +IH R +P + DV++ +LA +++G TGAD++ + +EAA+ A+     E ++D  +
Sbjct: 363  RLEILQIHTRHMPLADDVDLEKLAEMTKGYTGADLAALAKEAAMHALRRYLPEIDIDQEK 422

Query: 1005 I----------TMQHLKTAIRHVQPS 1020
            I          TMQ    A + V PS
Sbjct: 423  IPTELLERMVVTMQDFLAAFKEVTPS 448



 Score =  207 bits (526), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 151/236 (63%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +  A +++++ +        S LG+ P KGVLL+GPPGTGKT LA+  A +S   
Sbjct: 192 IGGLHEVIARIRELVELPLRHPELFSRLGIEPPKGVLLYGPPGTGKTLLAKAVATESDAY 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +NGPE++S+ YGESEQ L E+F+ A ++APA++FIDE+DAIAP R +   E+ +R+V
Sbjct: 252 FVAINGPEIMSKFYGESEQRLREIFEEAKKNAPAIIFIDEIDAIAPKRDEVIGEVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNRP++I+PALRRPGR DREIE+               V
Sbjct: 312 AQLLALMDGLEGRGQVIVIGATNRPNAIDPALRRPGRFDREIEV--------------PV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    RLEIL      M  +  D ++E L+  T G+ GADLAAL  EAA+  LRRY
Sbjct: 358 PDKQGRLEILQIHTRHMPLA-DDVDLEKLAEMTKGYTGADLAALAKEAAMHALRRY 412



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/241 (43%), Positives = 144/241 (59%), Gaps = 25/241 (10%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL      L++I+       ++ S LG+ P KGVLL GPPGTGKT LA+  A +SG
Sbjct: 463 SDIGGLEDVKQELREIVEWPLKYPNSFSRLGIEPPKGVLLFGPPGTGKTMLAKAVATESG 522

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE---L 526
            N   + GPEV+S+  GESE+A+ E+F  A Q APAVVF DE+++IA  R  G EE   +
Sbjct: 523 ANFIAIRGPEVLSKWVGESEKAIREIFKKARQYAPAVVFFDEIESIASLR--GTEEDSNV 580

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            +R+V+ LL  +DG+   + V+VIAATNRPD ++PAL RPGR ++ I             
Sbjct: 581 GERIVSQLLTEIDGITNLENVVVIAATNRPDLVDPALLRPGRFEKLI------------- 627

Query: 587 SPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VP P +  RLEIL      +  +  D ++  L+  T+G+ GADLAAL  EAAL  L
Sbjct: 628 ---YVPPPDEKGRLEILKIHTRNVPLA-EDVDLAELAKMTNGYTGADLAALVREAALTAL 683

Query: 645 R 645
           R
Sbjct: 684 R 684


>gi|91081693|ref|XP_970788.1| PREDICTED: similar to spermatogenesis associated 5 [Tribolium
            castaneum]
          Length = 696

 Score =  322 bits (824), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 164/323 (50%), Positives = 224/323 (69%), Gaps = 9/323 (2%)

Query: 716  VSEIADNFHNGVSD------SSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
            + EIA N H  V        S  G+  S++  A K+   DF+ A   VRPSAMREV +EV
Sbjct: 372  LGEIALNTHGFVGADLLALCSRAGLIASKRE-AEKITFDDFKAALKHVRPSAMREVQVEV 430

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
              V+W D+GG + +K  L +AVEWP +H E+F R+G  PP G+LMFGPPGCSKT++A+A+
Sbjct: 431  ANVRWGDIGGLQNLKLILRQAVEWPLRHPESFLRLGVTPPKGVLMFGPPGCSKTMIAKAL 490

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E+GLNFL++KGPELFSKWVGESEKAVR +F KAR  APS+IFFDEID L   R   S 
Sbjct: 491  ATESGLNFLSIKGPELFSKWVGESEKAVREVFRKARQVAPSVIFFDEIDALGGERSSGS- 549

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
              SV +RV++QLL ELDG+    +VTV+AATNRPD+ID ALLRPGR DR++YV  P++  
Sbjct: 550  STSVQERVLAQLLTELDGVSPLGDVTVLAATNRPDRIDKALLRPGRLDRIVYVPLPDDDT 609

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQH 1009
            R EIF++ L K+P   +V++ EL  L+ G +GA+++ +C EAA+ A+E++LDA  +  +H
Sbjct: 610  RREIFKLKLGKMPV-CNVDVEELVRLTPGYSGAEVNAVCHEAAMMALEDSLDARFVEKRH 668

Query: 1010 LKTAIRHVQPSEIHSYKELSAKF 1032
             + A+  V+P    S  +L   +
Sbjct: 669  FEKALTIVKPRTPDSLIQLYQDY 691



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 146/277 (52%), Gaps = 24/277 (8%)

Query: 370 HETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-I 428
            E +   +    A  K +R   +   Q+E  NV+         +GGL     IL+  +  
Sbjct: 401 REAEKITFDDFKAALKHVRPSAMREVQVEVANVRW------GDIGGLQNLKLILRQAVEW 454

Query: 429 SSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGES 488
                 +   LG+ P KGVL+ GPPG  KT +A+  A +SG+N  ++ GPE+ S+  GES
Sbjct: 455 PLRHPESFLRLGVTPPKGVLMFGPPGCSKTMIAKALATESGLNFLSIKGPELFSKWVGES 514

Query: 489 EQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGV 547
           E+A+ EVF  A Q AP+V+F DE+DA+   R  G    + +R++A LL  +DGV     V
Sbjct: 515 EKAVREVFRKARQVAPSVIFFDEIDALGGERSSGSSTSVQERVLAQLLTELDGVSPLGDV 574

Query: 548 LVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSG 607
            V+AATNRPD I+ AL RPGRLDR + + +              P    R EI    L  
Sbjct: 575 TVLAATNRPDRIDKALLRPGRLDRIVYVPL--------------PDDDTRREIFKLKLGK 620

Query: 608 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           M   + + +VE L   T G+ GA++ A+C+EAA++ L
Sbjct: 621 M--PVCNVDVEELVRLTPGYSGAEVNAVCHEAAMMAL 655



 Score =  142 bits (359), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 149/257 (57%), Gaps = 18/257 (7%)

Query: 400 QNVQATVEQDI-SKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           +  + T+  D+ S +GGL  E A +K+ I  ++  ST  S GL+  K +LL+G  GTGKT
Sbjct: 171 KTFEKTLNNDLLSTIGGLDDEIADIKEAI--NACLSTKKSYGLKHCKSILLYGNSGTGKT 228

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            LAR  + +   ++  +N  ++ S+  G  E+ +  +FD A + AP ++ +DE+D + P 
Sbjct: 229 LLARAISREFKTHIIEINASDLYSKYSGNVEETIKNLFDEAIEHAPTIIILDEIDILCPT 288

Query: 519 RKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
           R     +  +R+ A LL ++D +  +  V ++A TN+ +SI+P  RR GRL+REIEI   
Sbjct: 289 RTQRMTDSEKRVSAMLLTMLDNL-NSSSVFLLATTNKLESIDPVFRRFGRLEREIEI--- 344

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                      + P+P  R +IL  LLS + H+L ++++  +++ THGFVGADL ALC+ 
Sbjct: 345 -----------STPNPKNRQKILSKLLSQVVHNLSEADLGEIALNTHGFVGADLLALCSR 393

Query: 639 AALVCLRRYSKIQTSSD 655
           A L+  +R ++  T  D
Sbjct: 394 AGLIASKREAEKITFDD 410



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 124/226 (54%), Gaps = 6/226 (2%)

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            K  G +    IL++G  G  KTL+ARA++ E   + + +   +L+SK+ G  E+ +++LF
Sbjct: 207  KSYGLKHCKSILLYGNSGTGKTLLARAISREFKTHIIEINASDLYSKYSGNVEETIKNLF 266

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             +A  +AP+II  DEID L   R +         RV + LL  LD L+   +V ++A TN
Sbjct: 267  DEAIEHAPTIIILDEIDILCPTRTQRM--TDSEKRVSAMLLTMLDNLNSS-SVFLLATTN 323

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCT 980
            + + IDP   R GR +R + +  PN  +R++I    L ++  + S+ ++ E+A  + G  
Sbjct: 324  KLESIDPVFRRFGRLEREIEISTPNPKNRQKILSKLLSQVVHNLSEADLGEIALNTHGFV 383

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYK 1026
            GAD+  +C  A +  I    +A +IT    K A++HV+PS +   +
Sbjct: 384  GADLLALCSRAGL--IASKREAEKITFDDFKAALKHVRPSAMREVQ 427


>gi|270006246|gb|EFA02694.1| hypothetical protein TcasGA2_TC008415 [Tribolium castaneum]
          Length = 758

 Score =  322 bits (824), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 162/310 (52%), Positives = 220/310 (70%), Gaps = 9/310 (2%)

Query: 716  VSEIADNFHNGVSD------SSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV 769
            + EIA N H  V        S  G+  S++  A K+   DF+ A   VRPSAMREV +EV
Sbjct: 434  LGEIALNTHGFVGADLLALCSRAGLIASKRE-AEKITFDDFKAALKHVRPSAMREVQVEV 492

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
              V+W D+GG + +K  L +AVEWP +H E+F R+G  PP G+LMFGPPGCSKT++A+A+
Sbjct: 493  ANVRWGDIGGLQNLKLILRQAVEWPLRHPESFLRLGVTPPKGVLMFGPPGCSKTMIAKAL 552

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E+GLNFL++KGPELFSKWVGESEKAVR +F KAR  APS+IFFDEID L   R   S 
Sbjct: 553  ATESGLNFLSIKGPELFSKWVGESEKAVREVFRKARQVAPSVIFFDEIDALGGERSSGS- 611

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
              SV +RV++QLL ELDG+    +VTV+AATNRPD+ID ALLRPGR DR++YV  P++  
Sbjct: 612  STSVQERVLAQLLTELDGVSPLGDVTVLAATNRPDRIDKALLRPGRLDRIVYVPLPDDDT 671

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQH 1009
            R EIF++ L K+P   +V++ EL  L+ G +GA+++ +C EAA+ A+E++LDA  +  +H
Sbjct: 672  RREIFKLKLGKMPV-CNVDVEELVRLTPGYSGAEVNAVCHEAAMMALEDSLDARFVEKRH 730

Query: 1010 LKTAIRHVQP 1019
             + A+  V+P
Sbjct: 731  FEKALTIVKP 740



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 146/277 (52%), Gaps = 24/277 (8%)

Query: 370 HETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-I 428
            E +   +    A  K +R   +   Q+E  NV+         +GGL     IL+  +  
Sbjct: 463 REAEKITFDDFKAALKHVRPSAMREVQVEVANVRW------GDIGGLQNLKLILRQAVEW 516

Query: 429 SSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGES 488
                 +   LG+ P KGVL+ GPPG  KT +A+  A +SG+N  ++ GPE+ S+  GES
Sbjct: 517 PLRHPESFLRLGVTPPKGVLMFGPPGCSKTMIAKALATESGLNFLSIKGPELFSKWVGES 576

Query: 489 EQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGV 547
           E+A+ EVF  A Q AP+V+F DE+DA+   R  G    + +R++A LL  +DGV     V
Sbjct: 577 EKAVREVFRKARQVAPSVIFFDEIDALGGERSSGSSTSVQERVLAQLLTELDGVSPLGDV 636

Query: 548 LVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSG 607
            V+AATNRPD I+ AL RPGRLDR + + +              P    R EI    L  
Sbjct: 637 TVLAATNRPDRIDKALLRPGRLDRIVYVPL--------------PDDDTRREIFKLKLGK 682

Query: 608 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           M   + + +VE L   T G+ GA++ A+C+EAA++ L
Sbjct: 683 M--PVCNVDVEELVRLTPGYSGAEVNAVCHEAAMMAL 717



 Score =  143 bits (360), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 148/254 (58%), Gaps = 18/254 (7%)

Query: 403 QATVEQDI-SKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           + T+  D+ S +GGL  E A +K+ I  ++  ST  S GL+  K +LL+G  GTGKT LA
Sbjct: 236 EKTLNNDLLSTIGGLDDEIADIKEAI--NACLSTKKSYGLKHCKSILLYGNSGTGKTLLA 293

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
           R  + +   ++  +N  ++ S+  G  E+ +  +FD A + AP ++ +DE+D + P R  
Sbjct: 294 RAISREFKTHIIEINASDLYSKYSGNVEETIKNLFDEAIEHAPTIIILDEIDILCPTRTQ 353

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
              +  +R+ A LL ++D +  +  V ++A TN+ +SI+P  RR GRL+REIEI      
Sbjct: 354 RMTDSEKRVSAMLLTMLDNL-NSSSVFLLATTNKLESIDPVFRRFGRLEREIEI------ 406

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
                   + P+P  R +IL  LLS + H+L ++++  +++ THGFVGADL ALC+ A L
Sbjct: 407 --------STPNPKNRQKILSKLLSQVVHNLSEADLGEIALNTHGFVGADLLALCSRAGL 458

Query: 642 VCLRRYSKIQTSSD 655
           +  +R ++  T  D
Sbjct: 459 IASKREAEKITFDD 472



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 122/220 (55%), Gaps = 6/220 (2%)

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            K  G +    IL++G  G  KTL+ARA++ E   + + +   +L+SK+ G  E+ +++LF
Sbjct: 269  KSYGLKHCKSILLYGNSGTGKTLLARAISREFKTHIIEINASDLYSKYSGNVEETIKNLF 328

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             +A  +AP+II  DEID L   R +         RV + LL  LD L+   +V ++A TN
Sbjct: 329  DEAIEHAPTIIILDEIDILCPTRTQRM--TDSEKRVSAMLLTMLDNLNSS-SVFLLATTN 385

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCT 980
            + + IDP   R GR +R + +  PN  +R++I    L ++  + S+ ++ E+A  + G  
Sbjct: 386  KLESIDPVFRRFGRLEREIEISTPNPKNRQKILSKLLSQVVHNLSEADLGEIALNTHGFV 445

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            GAD+  +C  A +  I    +A +IT    K A++HV+PS
Sbjct: 446  GADLLALCSRAGL--IASKREAEKITFDDFKAALKHVRPS 483


>gi|332158940|ref|YP_004424219.1| cell division control protein [Pyrococcus sp. NA2]
 gi|331034403|gb|AEC52215.1| cell division control protein [Pyrococcus sp. NA2]
          Length = 840

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 161/309 (52%), Positives = 213/309 (68%), Gaps = 17/309 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++EVP V W+D+GG  EVK QL EAVEWP K  +AFK
Sbjct: 515  LKVTRADFYEALKMVEPSALREVLIEVPNVHWDDIGGLEEVKQQLREAVEWPLKFPKAFK 574

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A++GPE+ SKWVGESEK +R +F 
Sbjct: 575  RLGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSKWVGESEKRIREIFR 634

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+IIF DEID +A  RG  ++G  V+DR+++QLL E+DGL +   V VIAATNR
Sbjct: 635  KARQAAPAIIFIDEIDAIAPARGT-TEGERVTDRIINQLLTEMDGLVENSGVVVIAATNR 693

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+ V  P+E  R EIF++H R +P   DV++RELA  +EG TGA
Sbjct: 694  PDILDPALLRPGRFDRLILVPAPDERARFEIFKVHTRNMPLGEDVDLRELARRTEGYTGA 753

Query: 983  DISLICREAAISAIE-----------ENLDASRI-----TMQHLKTAIRHVQPSEIHSYK 1026
            DI+ +CREAA++A+            EN D   I     T +  + A++ V+PS      
Sbjct: 754  DIAAVCREAAMNALRRVVKRLPAEELENEDDKFIKSLVVTKKDFEEALKKVKPSVTKYMM 813

Query: 1027 ELSAKFQRL 1035
            E   +F+ L
Sbjct: 814  EYYRQFEEL 822



 Score =  216 bits (549), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 115/263 (43%), Positives = 161/263 (61%), Gaps = 22/263 (8%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            ++V P A+     ++P+V +ED+GG ++   ++ E VE P KH E F+R+G  PP G+L+
Sbjct: 192  VEVLPQAVEVREEKIPEVTYEDIGGLKDAIEKIREMVELPLKHPELFERLGIEPPKGVLL 251

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF 
Sbjct: 252  YGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIFI 311

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV+SQLL  +DGL  R  V VIAATNRPD +DPAL RPG
Sbjct: 312  DEIDAIAPKR-EEVVG-EVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDALDPALRRPG 369

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + VG P++  R+EI +IH R +P   D                      +EA I 
Sbjct: 370  RFDREIEVGVPDKKGRKEILQIHTRGMPIEPDFE--------------------KEAVIK 409

Query: 995  AIEENLDASRITMQHLKTAIRHV 1017
            A++E     R   + ++  I  V
Sbjct: 410  ALKELEKDERFNKEKIRELIERV 432



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 100/219 (45%), Positives = 132/219 (60%), Gaps = 20/219 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                LG+ P KG+LL+GPPGTGKT LA+  A +S  N   + GPEV+S+  GESE+ + 
Sbjct: 571 KAFKRLGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSKWVGESEKRIR 630

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           E+F  A Q+APA++FIDE+DAIAPAR    GE ++ R++  LL  MDG+    GV+VIAA
Sbjct: 631 EIFRKARQAAPAIIFIDEIDAIAPARGTTEGERVTDRIINQLLTEMDGLVENSGVVVIAA 690

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD ++PAL RPGR DR I                 VP+P +  R EI       M  
Sbjct: 691 TNRPDILDPALLRPGRFDRLI----------------LVPAPDERARFEIFKVHTRNMPL 734

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
              D ++  L+  T G+ GAD+AA+C EAA+  LRR  K
Sbjct: 735 G-EDVDLRELARRTEGYTGADIAAVCREAAMNALRRVVK 772



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/220 (42%), Positives = 134/220 (60%), Gaps = 19/220 (8%)

Query: 391 TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
            LP A ++  + +     +DI   GGL      +++++ +          LG+ P KGVL
Sbjct: 194 VLPQAVEVREEKIPEVTYEDI---GGLKDAIEKIREMVELPLKHPELFERLGIEPPKGVL 250

Query: 449 LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
           L+GPPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L E+F  A ++APA++F
Sbjct: 251 LYGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIF 310

Query: 509 IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
           IDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+++PALRRPGR
Sbjct: 311 IDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDALDPALRRPGR 370

Query: 569 LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
            DREIE+               VP    R EIL     GM
Sbjct: 371 FDREIEV--------------GVPDKKGRKEILQIHTRGM 396



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 31/42 (73%)

Query: 608 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +++ L+D  ++ L+  THGFVGADLAAL  EAA+V LRR  K
Sbjct: 455 IKNKLIDKLLDELAEVTHGFVGADLAALAREAAMVVLRRLIK 496


>gi|296478718|tpg|DAA20833.1| TPA: spermatogenesis associated 5-like [Bos taurus]
          Length = 1004

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 147/291 (50%), Positives = 210/291 (72%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   VK +L +AVEWP KH E+F 
Sbjct: 706  VKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFT 765

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 766  QMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 825

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVT++AATNR
Sbjct: 826  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNR 885

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P +++V++ EL   ++  +GA
Sbjct: 886  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPINNEVDLNELILQTDTYSGA 945

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ +  +H   A+  V P    S +     +Q
Sbjct: 946  EIIAVCREAALLALEEDITANCVMKRHFTQALSTVTPRLPESLRRFYEDYQ 996



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 161/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q  Q  V  D+  +GGL+ +   +++II +         S G+ P +GVLL+GPPGTGKT
Sbjct: 455 QANQLKVTYDM--IGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 512

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 513 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 572

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 573 REGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 632

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL AL
Sbjct: 633 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKAL 678

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  + Q
Sbjct: 679 CNEAGLHALRRVLRRQ 694



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 152/269 (56%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG      ++ E +E P K  E FK  G  PP G+L++GPPG  KT++ARAVA
Sbjct: 460  KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 519

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 520  NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 577

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 578  NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 637

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EENL 1000
             DR +I +  LR++P   ++  + +LA  + G  GAD+  +C EA + A+      + NL
Sbjct: 638  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRRQPNL 697

Query: 1001 DAS------RITMQHLKTAIRHVQPSEIH 1023
              S      +IT++     +  ++PS + 
Sbjct: 698  PDSKMAGLVKITLKDFLQGMNDIRPSAMR 726



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 131/214 (61%), Gaps = 21/214 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 763 SFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 822

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AA
Sbjct: 823 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAA 882

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M    
Sbjct: 883 TNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMP--- 925

Query: 613 LDSEVEY--LSMATHGFVGADLAALCNEAALVCL 644
           +++EV+   L + T  + GA++ A+C EAAL+ L
Sbjct: 926 INNEVDLNELILQTDTYSGAEIIAVCREAALLAL 959


>gi|119872050|ref|YP_930057.1| ATPase AAA [Pyrobaculum islandicum DSM 4184]
 gi|119673458|gb|ABL87714.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum islandicum DSM 4184]
          Length = 738

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 153/303 (50%), Positives = 211/303 (69%), Gaps = 9/303 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   V P+ +REVI+EVP+V W+D+GG   +K +L E VEWP K++  F 
Sbjct: 433  LKVGMSDFLEAMKYVHPTVLREVIIEVPEVHWDDIGGYDTIKQELREIVEWPMKYKHYFD 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KTL A+AVA+E+G NF+AV+GPEL SKWVGESEKA+R +F 
Sbjct: 493  ELGVEPPKGILLFGPPGVGKTLFAKAVATESGANFIAVRGPELLSKWVGESEKAIREIFK 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP +IFFDEID +A  RG       V+DR+++QLL E+DG+    NV V+AATNR
Sbjct: 553  KARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDRMVNQLLAEMDGIGTLKNVVVMAATNR 612

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R EI ++H RKI    DVN+ ELA  +EG TGA
Sbjct: 613  PDILDPALLRPGRFDRIIYVPPPDLKARIEILKVHTRKIKLGDDVNLEELAKKTEGYTGA 672

Query: 983  DISLICREAAISAIEENL-----DASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            D++ + REAA+ A+ E +      A  ++ +H + A++ + PS    +I  Y+E++ + +
Sbjct: 673  DLAALVREAAMLALRETIKEKTPKAKPVSWKHFEEALKRIPPSLTPEDIRRYEEMAKRIK 732

Query: 1034 RLV 1036
            R V
Sbjct: 733  RAV 735



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 110/238 (46%), Positives = 154/238 (64%), Gaps = 15/238 (6%)

Query: 757 VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
           VR   ++E  L +P+V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ G
Sbjct: 159 VREEPVKETELSIPRVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIG 218

Query: 817 PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
           PPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DE
Sbjct: 219 PPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDE 278

Query: 877 IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
           ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD IDPAL RPGRF
Sbjct: 279 IDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQVIVIGATNRPDAIDPALRRPGRF 336

Query: 937 DRLLYVGPPNETDREEIFRIHLRKIP-CSS------------DVNIRELACLSEGCTG 981
           DR +++  P++  R EI  +H R +P C+             +V++ ++A ++ G TG
Sbjct: 337 DREIHIPMPDKRARREILAVHTRNMPLCTKADVESGICAPGDEVDLDKIAEMTHGYTG 394



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/142 (55%), Positives = 105/142 (73%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 203 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 262

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 263 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVIVIGATNR 322

Query: 556 PDSIEPALRRPGRLDREIEIDM 577
           PD+I+PALRRPGR DREI I M
Sbjct: 323 PDAIDPALRRPGRFDREIHIPM 344



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 138/245 (56%), Gaps = 22/245 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG       L++I+      K     LG+ P KG+LL GPPG GKT  A+  A +SG N
Sbjct: 467 IGGYDTIKQELREIVEWPMKYKHYFDELGVEPPKGILLFGPPGVGKTLFAKAVATESGAN 526

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
              V GPE++S+  GESE+A+ E+F  A  +AP V+F DE+D+IAPAR  + G   ++ R
Sbjct: 527 FIAVRGPELLSKWVGESEKAIREIFKKARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDR 586

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           MV  LL  MDG+     V+V+AATNRPD ++PAL RPGR DR I                
Sbjct: 587 MVNQLLAEMDGIGTLKNVVVMAATNRPDILDPALLRPGRFDRII---------------- 630

Query: 590 AVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            VP P    R+EIL      ++    D  +E L+  T G+ GADLAAL  EAA++ LR  
Sbjct: 631 YVPPPDLKARIEILKVHTRKIKLG-DDVNLEELAKKTEGYTGADLAALVREAAMLALRET 689

Query: 648 SKIQT 652
            K +T
Sbjct: 690 IKEKT 694


>gi|171186069|ref|YP_001794988.1| AAA ATPase [Pyrobaculum neutrophilum V24Sta]
 gi|170935281|gb|ACB40542.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum neutrophilum V24Sta]
          Length = 737

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 149/303 (49%), Positives = 213/303 (70%), Gaps = 9/303 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF++A   V P+ +REVI+EVP+V+W+D+GG   +K +L E VEWP K++  F 
Sbjct: 432  LKVGMSDFQEAMKYVHPTVLREVIIEVPEVRWDDIGGYETIKQELREIVEWPMKYKHYFD 491

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KTL A+AVA+E+G NF+AV+GPEL SKWVGESEKA+R +F 
Sbjct: 492  ELGVEPPKGILLFGPPGVGKTLFAKAVATESGANFIAVRGPELLSKWVGESEKAIREVFK 551

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP +IFFDEID +A  RG       V+DR+++QLL E+DG+    NV V+AATNR
Sbjct: 552  RARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDRMVNQLLAEMDGIGTLKNVVVMAATNR 611

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++YV PP+   R EI ++H ++I    DVN+ ELA  +EG TGA
Sbjct: 612  PDILDPALLRPGRFDRVIYVPPPDLKARVEILKVHTKRIKLGDDVNLEELAKRTEGYTGA 671

Query: 983  DISLICREAAISAIEENL-----DASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            D++ + REAA+ A+ E +      A  ++ +H + A++ + PS    +I  Y+E++ + +
Sbjct: 672  DLAAVVREAAMLALRETIKERSVKAKPVSAKHFEEALKRIPPSLTPEDIRRYEEMAKRVR 731

Query: 1034 RLV 1036
            R +
Sbjct: 732  RAI 734



 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 104/218 (47%), Positives = 144/218 (66%), Gaps = 2/218 (0%)

Query: 757 VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
           VR   ++E  L +P+V WED+G   + K ++ E VE P +H E FK +G  PP GIL+ G
Sbjct: 158 VREEPVKEAELTIPRVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIG 217

Query: 817 PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
           PPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DE
Sbjct: 218 PPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDE 277

Query: 877 IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
           ID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRF
Sbjct: 278 IDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRF 335

Query: 937 DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC 974
           DR +++  P++  R EI  +H R +P  +  ++    C
Sbjct: 336 DREIHIPMPDKRARREILAVHTRNMPLCTKADVENKIC 373



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 78/142 (54%), Positives = 105/142 (73%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 202 FKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAYFVAINGPEIMSKYYGESEARLREI 261

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 262 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVVVIGATNR 321

Query: 556 PDSIEPALRRPGRLDREIEIDM 577
           PD+++PALRRPGR DREI I M
Sbjct: 322 PDAVDPALRRPGRFDREIHIPM 343



 Score =  169 bits (429), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 136/242 (56%), Gaps = 22/242 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG       L++I+      K     LG+ P KG+LL GPPG GKT  A+  A +SG N
Sbjct: 466 IGGYETIKQELREIVEWPMKYKHYFDELGVEPPKGILLFGPPGVGKTLFAKAVATESGAN 525

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
              V GPE++S+  GESE+A+ EVF  A  +AP V+F DE+D+IAPAR  + G   ++ R
Sbjct: 526 FIAVRGPELLSKWVGESEKAIREVFKRARMAAPCVIFFDEIDSIAPARGSRLGDSGVTDR 585

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           MV  LL  MDG+     V+V+AATNRPD ++PAL RPGR DR I                
Sbjct: 586 MVNQLLAEMDGIGTLKNVVVMAATNRPDILDPALLRPGRFDRVI---------------- 629

Query: 590 AVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            VP P    R+EIL      ++    D  +E L+  T G+ GADLAA+  EAA++ LR  
Sbjct: 630 YVPPPDLKARVEILKVHTKRIKLG-DDVNLEELAKRTEGYTGADLAAVVREAAMLALRET 688

Query: 648 SK 649
            K
Sbjct: 689 IK 690


>gi|261403322|ref|YP_003247546.1| ATPase AAA [Methanocaldococcus vulcanius M7]
 gi|261370315|gb|ACX73064.1| AAA family ATPase, CDC48 subfamily [Methanocaldococcus vulcanius M7]
          Length = 903

 Score =  321 bits (822), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 153/276 (55%), Positives = 205/276 (74%), Gaps = 1/276 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF++A  +V PSAMREV++EVP +KWED+GG  +VK +L EAVEWP K +E F+
Sbjct: 420  LKVTMDDFKEALKEVEPSAMREVLVEVPNIKWEDIGGLEDVKQELREAVEWPLKAKEVFE 479

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +IG RPP G+L+FGPPG  KTL+A+AVA+E+G NF++VKGPE+FSKWVGESEKA+R +F 
Sbjct: 480  KIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFR 539

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR +AP IIFFDEID +A  RG++    +V+D+V++QLL ELDG+ +  +V VIAATNR
Sbjct: 540  KARQSAPCIIFFDEIDAIAPKRGRDLSS-AVTDKVVNQLLTELDGMEEPKDVIVIAATNR 598

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR++ V  P+E  R +I +IH R +    DVN+ ELA  +EG TGA
Sbjct: 599  PDIIDSALLRPGRLDRVILVPVPDEKARLDILKIHTRSMNLDEDVNLEELAKKTEGYTGA 658

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            DI  +CREAA+ A+ E +         L+  I ++Q
Sbjct: 659  DIEALCREAAMLAVREGIGKPWEIEVKLRDLINYLQ 694



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 125/292 (42%), Positives = 187/292 (64%), Gaps = 20/292 (6%)

Query: 745  LELVDFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            + + +F    +K  P S ++E   +VP V +ED+GG +E   ++ E +E P +H E F++
Sbjct: 150  VRVTEFTHVELKEEPVSEVKET--KVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEK 207

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G  PP G+L+ GPPG  KTL+A+AVA+EAG NF  + GPE+ SK+VGE+E+ +R +F +
Sbjct: 208  LGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEE 267

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            A  NAPSIIF DE+D +A  R + S    V  R+++QLL  +DGL  R  V VI ATNRP
Sbjct: 268  AEENAPSIIFIDELDAIAPKRDEASG--EVERRLVAQLLTLMDGLKGRGQVVVIGATNRP 325

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            + +DPAL RPGRFDR + +G P+   R+EI +IH R +P + DV++  LA ++ G  GAD
Sbjct: 326  NALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGAD 385

Query: 984  ISLICREAAISAI---------------EENLDASRITMQHLKTAIRHVQPS 1020
            ++ +C+EAA+ A+               +E LD  ++TM   K A++ V+PS
Sbjct: 386  LAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKEVEPS 437



 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/255 (44%), Positives = 161/255 (63%), Gaps = 19/255 (7%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P ++++   V     +DI   GGL +E   ++++I +          LG+ P KGVLL G
Sbjct: 164 PVSEVKETKVPDVTYEDI---GGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVG 220

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A+++G N + +NGPE++S+  GE+E+ L ++F+ A ++AP+++FIDE
Sbjct: 221 PPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDE 280

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           LDAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNRP++++PALRRPGR DR
Sbjct: 281 LDAIAPKRDEASGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDR 340

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
           EI I               VP    R EIL      M  +  D +++YL+  THGFVGAD
Sbjct: 341 EIVI--------------GVPDREGRKEILQIHTRNMPLA-EDVDLDYLADVTHGFVGAD 385

Query: 632 LAALCNEAALVCLRR 646
           LAALC EAA+  LRR
Sbjct: 386 LAALCKEAAMRALRR 400



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/216 (46%), Positives = 132/216 (61%), Gaps = 20/216 (9%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K     +G+RP KGVLL GPPGTGKT LA+  A++SG N  +V GPE+ S+  GESE+A+
Sbjct: 475 KEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAI 534

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            E+F  A QSAP ++F DE+DAIAP R +D    ++ ++V  LL  +DG+     V+VIA
Sbjct: 535 REIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVIVIA 594

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+ AL RPGRLDR I +               VP    RL+IL      M   
Sbjct: 595 ATNRPDIIDSALLRPGRLDRVILV--------------PVPDEKARLDILKIHTRSMN-- 638

Query: 612 LLDSEV--EYLSMATHGFVGADLAALCNEAALVCLR 645
            LD +V  E L+  T G+ GAD+ ALC EAA++ +R
Sbjct: 639 -LDEDVNLEELAKKTEGYTGADIEALCREAAMLAVR 673


>gi|119719589|ref|YP_920084.1| AAA family ATPase, CDC48 subfamily protein [Thermofilum pendens Hrk
            5]
 gi|119524709|gb|ABL78081.1| AAA family ATPase, CDC48 subfamily [Thermofilum pendens Hrk 5]
          Length = 718

 Score =  321 bits (822), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 158/298 (53%), Positives = 220/298 (73%), Gaps = 5/298 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V+PSA+REV +EVP+V W+D+GG  +VK QL EAVE P +H E F+
Sbjct: 421  LKVTREDFMQALKDVQPSALREVYIEVPEVHWDDIGGLEDVKQQLREAVELPLRHPEYFR 480

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+ VKGPE+ SKWVGESEKAVR +F 
Sbjct: 481  EMGIDPPKGILLYGPPGTGKTLLAKAVATESEANFIGVKGPEILSKWVGESEKAVREIFR 540

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP +IFFDEID +   RG+  D   V+DR+++QLL E+DGL +   V VIAATNR
Sbjct: 541  KARQAAPCVIFFDEIDSIVPRRGQRFDS-GVTDRIVNQLLTEMDGLERLEGVVVIAATNR 599

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+YV PP+E  R EI ++H R++P + DV++ E+A  +EG TGA
Sbjct: 600  PDIIDPALLRPGRFDRLIYVPPPDEKARLEILKVHTRRMPLAEDVDLAEIARKTEGYTGA 659

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLV 1036
            D++ +C+EAA++A+ E    +++T +H + A++ V+PS    +I  YK +S +F+R++
Sbjct: 660  DLAAVCKEAALAALREAGKPTKVTKRHFEQALQIVKPSVTKEDIERYKRISEEFRRML 717



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 124/271 (45%), Positives = 174/271 (64%), Gaps = 17/271 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P++ +ED+G   E K ++ E VE P +H E FK +G  PP G+L +GPPG  KTL+A+A
Sbjct: 174  IPRITYEDIGDLEEAKQKIREMVELPLRHPELFKHLGIEPPKGVLFYGPPGTGKTLLAKA 233

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E G  F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E 
Sbjct: 234  VANETGAYFIAINGPEIMSKFYGESEQRLREIFEEATKNAPAIIFIDEIDAIAPKR-EEV 292

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  V VIAATNRPD IDPAL RPGRFDR +    P++ 
Sbjct: 293  TG-EVEKRVVAQLLALMDGLKERGQVIVIAATNRPDDIDPALRRPGRFDREIAFPVPDKR 351

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EI ++H R +P + DVN+ ELA ++ G TGAD++ +CREAA+ A+            
Sbjct: 352  ARREILQVHTRNMPLAEDVNLDELAEITHGFTGADLAALCREAAMHALRRFLPKIDIESE 411

Query: 998  ----ENLDASRITMQHLKTAIRHVQPSEIHS 1024
                E L   ++T +    A++ VQPS +  
Sbjct: 412  KIPTEILKELKVTREDFMQALKDVQPSALRE 442



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/241 (47%), Positives = 151/241 (62%), Gaps = 17/241 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVL +GPPGTGKT LA+  A+++G     +NGPE++S+ YGESEQ L E+
Sbjct: 206 FKHLGIEPPKGVLFYGPPGTGKTLLAKAVANETGAYFIAINGPEIMSKFYGESEQRLREI 265

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A+++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 266 FEEATKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLALMDGLKERGQVIVIAATNR 325

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+PALRRPGR DREI                 VP    R EIL      M  +  D 
Sbjct: 326 PDDIDPALRRPGRFDREIAF--------------PVPDKRARREILQVHTRNMPLA-EDV 370

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY-SKIQTSSDVLHSTGTLFEFEGHSDTML 674
            ++ L+  THGF GADLAALC EAA+  LRR+  KI   S+ +  T  L E +   +  +
Sbjct: 371 NLDELAEITHGFTGADLAALCREAAMHALRRFLPKIDIESEKI-PTEILKELKVTREDFM 429

Query: 675 Q 675
           Q
Sbjct: 430 Q 430



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/207 (45%), Positives = 125/207 (60%), Gaps = 24/207 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+ P KG+LL+GPPGTGKT LA+  A +S  N   V GPE++S+  GESE+A+ E+
Sbjct: 479 FREMGIDPPKGILLYGPPGTGKTLLAKAVATESEANFIGVKGPEILSKWVGESEKAVREI 538

Query: 496 FDSASQSAPAVVFIDELDAIAPARK---DGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q+AP V+F DE+D+I P R    D G  ++ R+V  LL  MDG+ R +GV+VIAA
Sbjct: 539 FRKARQAAPCVIFFDEIDSIVPRRGQRFDSG--VTDRIVNQLLTEMDGLERLEGVVVIAA 596

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD I+PAL RPGR DR I                 VP P +  RLEIL      M  
Sbjct: 597 TNRPDIIDPALLRPGRFDRLI----------------YVPPPDEKARLEILKVHTRRMPL 640

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCN 637
           +  D ++  ++  T G+ GADLAA+C 
Sbjct: 641 A-EDVDLAEIARKTEGYTGADLAAVCK 666


>gi|315040517|ref|XP_003169636.1| peroxisome biogenesis factor 1 [Arthroderma gypseum CBS 118893]
 gi|311346326|gb|EFR05529.1| peroxisome biogenesis factor 1 [Arthroderma gypseum CBS 118893]
          Length = 798

 Score =  321 bits (822), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 215/634 (33%), Positives = 331/634 (52%), Gaps = 97/634 (15%)

Query: 413  LGGLSKEYAILKDIIISSSVKS---TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            LGGL+ + A++ + +   + +    T+ S   + + G+L++GP GTGK++L       + 
Sbjct: 239  LGGLAPQLAMVNERLQDFNTQEQSITMPSF-YKSSGGILIYGPKGTGKSALLAKIGDTNW 297

Query: 470  VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG---EEL 526
               F +    + S+  G+S   L ++F  A +  P+++ ID+L+ IAP R   G     L
Sbjct: 298  RRTFAITS-SITSRAAGDSAAVLRKIFSDALKYQPSLIKIDQLEFIAPKRSSTGPNDASL 356

Query: 527  SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
            S  +   L +L D       VLV+A T  P+ ++ +LR P RL  E+E+           
Sbjct: 357  SPALCEGLDSLQDSR-----VLVVACTRHPNDVDDSLRTPHRLGIEVELQ---------- 401

Query: 587  SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                +P+   RLEIL AL  G      D  +  L+  THG+VGADL +L     L C + 
Sbjct: 402  ----IPTSKSRLEILQAL-RGSAPQPTDRILGSLAAKTHGYVGADLLSLLQ---LSCRKA 453

Query: 647  YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLL 706
             +++  ++                   +++S  SR+  E   + + S    ++D P  L 
Sbjct: 454  KARMLAAT-----------------PSVENSISSRHYDEKDGEYIKSDLGLSNDKPGPL- 495

Query: 707  SSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVI 766
                       EI +                           D   A  + RP+AMREV 
Sbjct: 496  -----------EICEQ--------------------------DMILAMKEARPTAMREVF 518

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            LE P ++W D+GGQR +K++L +AVE P K  E  K +      GIL++GPPGCSKT+M 
Sbjct: 519  LETPSIRWSDIGGQRYIKSRLQKAVERPLKKPERMKNLNISGKKGILLYGPPGCSKTMMV 578

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +A+A+EAGLNFLAVKG E+ S +VGESE+A+R +F KARA +PSIIFFDEID +AA R  
Sbjct: 579  KALATEAGLNFLAVKGAEMLSMYVGESERAMREIFRKARAASPSIIFFDEIDAIAARRDA 638

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
             S G      +++ LL E+DG+ +  NV V+AATN+P+ +DPAL+RPGR D +LY+G P+
Sbjct: 639  GSHG---GINILTTLLNEMDGIEELKNVLVVAATNKPEILDPALMRPGRLDNILYIGLPD 695

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE----NLDA 1002
               R+EIF   + +   S  V+   LA L++G +GA++  IC  AA   +++     L  
Sbjct: 696  MEARKEIFENWISRSDVSDHVDAIVLASLTDGHSGAELVNICETAAELCLDDEEARELPD 755

Query: 1003 SRITMQHLKTAI----RHVQPSEIHSYKELSAKF 1032
              I ++H + ++    +  QP  I +Y+E S  F
Sbjct: 756  LPIQLEHFQASLSMVPKRTQPEVIQAYEEWSRSF 789


>gi|195401244|ref|XP_002059224.1| GJ16276 [Drosophila virilis]
 gi|194156098|gb|EDW71282.1| GJ16276 [Drosophila virilis]
          Length = 800

 Score =  321 bits (822), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 150/284 (52%), Positives = 205/284 (72%), Gaps = 3/284 (1%)

Query: 739  KGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQ 798
            K  A  LEL D + A  +V+PSAMREV++E P V+W D+GGQ E++  L +A+EWP  H 
Sbjct: 501  KAEARALELRDLQSALTQVKPSAMREVLIESPNVRWSDIGGQAELRLALQQAIEWPLLHA 560

Query: 799  EAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVR 858
            + F+R+G +PP G+LMFGPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR
Sbjct: 561  DKFQRLGIKPPRGVLMFGPPGCSKTMIAKALATESQLNFLSIKGPELFSMWVGESERAVR 620

Query: 859  SLFAKARANAPSIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVI 917
             +F KAR  AP+I+FFDEID +   R + S  G SV +RV++QLL ELDG+    NVT++
Sbjct: 621  EVFRKARQVAPAIVFFDEIDAIGGERAEGSTSGSSVKERVLTQLLTELDGVEALHNVTIV 680

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN--IRELACL 975
            AATNRPD ID ALLRPGR DR+ YVG P    R EI  I LR +P + +V   +  L  L
Sbjct: 681  AATNRPDMIDKALLRPGRIDRVCYVGLPEPEARREILHIKLRAMPLAENVVDIVDRLVTL 740

Query: 976  SEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            + G +GA+I  +C EAA+SA+E++ +A  +  +H + A++ VQP
Sbjct: 741  TAGYSGAEIQAVCHEAALSALEQSFEAEAVHWRHFEAALQMVQP 784



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 126/213 (59%), Gaps = 20/213 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P +GVL+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF  
Sbjct: 566 LGIKPPRGVLMFGPPGCSKTMIAKALATESQLNFLSIKGPELFSMWVGESERAVREVFRK 625

Query: 499 ASQSAPAVVFIDELDAIAPARKDG---GEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q APA+VF DE+DAI   R +G   G  + +R++  LL  +DGV     V ++AATNR
Sbjct: 626 ARQVAPAIVFFDEIDAIGGERAEGSTSGSSVKERVLTQLLTELDGVEALHNVTIVAATNR 685

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLL 613
           PD I+ AL RPGR+DR   + +              P P  R EILH  L  M    +++
Sbjct: 686 PDMIDKALLRPGRIDRVCYVGL--------------PEPEARREILHIKLRAMPLAENVV 731

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           D  V+ L   T G+ GA++ A+C+EAAL  L +
Sbjct: 732 DI-VDRLVTLTAGYSGAEIQAVCHEAALSALEQ 763



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 139/254 (54%), Gaps = 42/254 (16%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTLSSLGLRP-------TKGVLLHGPPGTGKTSLAR- 462
           +K+GGL KE  ++++        S   +LG RP       ++G+LL+G  G GK+ +   
Sbjct: 271 AKIGGLDKEIQLVEE--------SMDYALGYRPLPKGIKVSRGLLLYGASGCGKSLVCEA 322

Query: 463 LCA----HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP--AVVFIDELDAIA 516
           +CA     DS V L  +N  E+ S+  GE+EQ L   F+ A    P   ++ ++++  + 
Sbjct: 323 MCAAAQARDSKVQLIRINSGEIYSKFLGETEQKLAAHFERAYAHYPHPTLLLLEDVHTLC 382

Query: 517 PARKDGGEELSQRMVATLLNLMDGVC-----RTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           P ++D G +L +R+   +L+L+D +       +    ++A +++ D++ P++RR GRLD 
Sbjct: 383 P-KQDAGSDLVKRVSLAMLSLLDQLSSGSRPESSRTFLLATSSQIDALHPSIRRAGRLDC 441

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
           E+E+                P+PA R +ILH LL  ++H++ +SE+E ++  THG+VGAD
Sbjct: 442 ELEL--------------GAPAPAARQQILHCLLQPLQHNIQESELEQIASITHGYVGAD 487

Query: 632 LAALCNEAALVCLR 645
           LA L   A L  L+
Sbjct: 488 LANLVYTATLATLK 501



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 121/229 (52%), Gaps = 18/229 (7%)

Query: 805  GTRPPTGILMFGPPGCSKTLMARAV-----ASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
            G +   G+L++G  GC K+L+  A+     A ++ +  + +   E++SK++GE+E+ + +
Sbjct: 299  GIKVSRGLLLYGASGCGKSLVCEAMCAAAQARDSKVQLIRINSGEIYSKFLGETEQKLAA 358

Query: 860  LFAKARANA--PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLH-----QRV 912
             F +A A+   P+++  +++  L     K+  G  +  RV   +L  LD L      +  
Sbjct: 359  HFERAYAHYPHPTLLLLEDVHTLCP---KQDAGSDLVKRVSLAMLSLLDQLSSGSRPESS 415

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRE 971
               ++A +++ D + P++ R GR D  L +G P    R++I    L+ +  +  +  + +
Sbjct: 416  RTFLLATSSQIDALHPSIRRAGRLDCELELGAPAPAARQQILHCLLQPLQHNIQESELEQ 475

Query: 972  LACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            +A ++ G  GAD++ +   A ++ ++   +A  + ++ L++A+  V+PS
Sbjct: 476  IASITHGYVGADLANLVYTATLATLKA--EARALELRDLQSALTQVKPS 522


>gi|124028210|ref|YP_001013530.1| ATP-dependent protease [Hyperthermus butylicus DSM 5456]
 gi|123978904|gb|ABM81185.1| ATP-dependent protease [Hyperthermus butylicus DSM 5456]
          Length = 736

 Score =  321 bits (822), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 146/278 (52%), Positives = 208/278 (74%), Gaps = 1/278 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF  A  ++ PS +RE+ +EVP+V+W+D+GG  E K QL EAVEWP K+ + F+
Sbjct: 426  MEIRMEDFMAALREIVPSGLREIYIEVPEVRWDDIGGLEEAKQQLREAVEWPLKNPDIFR 485

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP GIL+FGPPG  KTL+A+A A+E+G NF+AV+GPE+ SKWVGESEK +R +F 
Sbjct: 486  RMGVEPPKGILLFGPPGTGKTLLAKAAATESGANFIAVRGPEILSKWVGESEKMIREIFR 545

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR +AP+IIFFDEID +A  RG   D   V+ R+++QLL ELDG+    NV VIAATNR
Sbjct: 546  KARQHAPAIIFFDEIDAIAQTRGV-YDTSGVTYRIVNQLLAELDGIVPLSNVVVIAATNR 604

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFD+++YV PP+   R EI RIH R++P + DV++  +A  +EG +GA
Sbjct: 605  PDILDPALLRPGRFDKIIYVPPPDTKARLEILRIHTRRMPLAEDVDLELIALRTEGYSGA 664

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            D++ + REAA+ A+ E+++A+++ M+H   A+  V+PS
Sbjct: 665  DLAALVREAAMLALREDINATKVHMRHFLKALEIVRPS 702



 Score =  243 bits (619), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 122/267 (45%), Positives = 174/267 (65%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P+V +ED+GG R++  ++ E VE P KH E FKR+G  PP GIL++GPPG  KTL+A+A
Sbjct: 179  IPRVTYEDIGGMRDIIQKVRELVELPLKHPEIFKRLGIEPPKGILLYGPPGVGKTLLAKA 238

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+E    F+A+ GPE+ SK+ GESE+ +R +F +A+ +AP+IIF DEID +A  R  E 
Sbjct: 239  IANETNAYFIAINGPEIMSKYYGESEQRLREIFEEAKKHAPAIIFIDEIDAIAPKR-DEV 297

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL  R +V VIAATNRP+ +DPAL RPGRFDR + +  P++ 
Sbjct: 298  IG-EVERRVVAQLLALMDGLESRGDVIVIAATNRPNALDPALRRPGRFDREIEIPLPDKQ 356

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EI +IH R +P + DV++  LA L+ G TGAD++ + REAA+ A+            
Sbjct: 357  GRLEILQIHTRNMPLAEDVDLERLAELTRGFTGADLAALVREAAMHALRRYLPKIDLNQD 416

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E L+   I M+    A+R + PS
Sbjct: 417  RIPPEVLEEMEIRMEDFMAALREIVPS 443



 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/337 (37%), Positives = 182/337 (54%), Gaps = 55/337 (16%)

Query: 320 GNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLYPP 379
           G+ V VP+L++   F+VI            +++P    ++ H++N  V+           
Sbjct: 134 GDTVLVPVLNQSIPFVVI------------QTKPHGVVTITHDTNIIVL----------- 170

Query: 380 LNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSL 439
                + + +G +P    E       + Q + +L  L  ++                  L
Sbjct: 171 ----ERPVEQGRIPRVTYEDIGGMRDIIQKVRELVELPLKHP------------EIFKRL 214

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+ P KG+LL+GPPG GKT LA+  A+++      +NGPE++S+ YGESEQ L E+F+ A
Sbjct: 215 GIEPPKGILLYGPPGVGKTLLAKAIANETNAYFIAINGPEIMSKYYGESEQRLREIFEEA 274

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
            + APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNRP+++
Sbjct: 275 KKHAPAIIFIDEIDAIAPKRDEVIGEVERRVVAQLLALMDGLESRGDVIVIAATNRPNAL 334

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY 619
           +PALRRPGR DREIEI +              P    RLEIL      M  +  D ++E 
Sbjct: 335 DPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLA-EDVDLER 379

Query: 620 LSMATHGFVGADLAALCNEAALVCLRRY-SKIQTSSD 655
           L+  T GF GADLAAL  EAA+  LRRY  KI  + D
Sbjct: 380 LAELTRGFTGADLAALVREAAMHALRRYLPKIDLNQD 416



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/308 (36%), Positives = 160/308 (51%), Gaps = 47/308 (15%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL  +R  P+V E M+     F+               V   LRE  +   ++ + ++  
Sbjct: 412 DLNQDRIPPEVLEEMEIRMEDFMAALR---------EIVPSGLREIYIEVPEVRWDDI-- 460

Query: 405 TVEQDISKLGGLSKEYAILKDIIISSSVKS--TLSSLGLRPTKGVLLHGPPGTGKTSLAR 462
                    GGL +    L++ +    +K+      +G+ P KG+LL GPPGTGKT LA+
Sbjct: 461 ---------GGLEEAKQQLREAV-EWPLKNPDIFRRMGVEPPKGILLFGPPGTGKTLLAK 510

Query: 463 LCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--- 519
             A +SG N   V GPE++S+  GESE+ + E+F  A Q APA++F DE+DAIA  R   
Sbjct: 511 AAATESGANFIAVRGPEILSKWVGESEKMIREIFRKARQHAPAIIFFDEIDAIAQTRGVY 570

Query: 520 KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSF 579
              G  ++ R+V  LL  +DG+     V+VIAATNRPD ++PAL RPGR D+ I      
Sbjct: 571 DTSG--VTYRIVNQLLAELDGIVPLSNVVVIAATNRPDILDPALLRPGRFDKII------ 622

Query: 580 LFSLLKNSPAAVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                      VP P    RLEIL      M  +  D ++E +++ T G+ GADLAAL  
Sbjct: 623 ----------YVPPPDTKARLEILRIHTRRMPLA-EDVDLELIALRTEGYSGADLAALVR 671

Query: 638 EAALVCLR 645
           EAA++ LR
Sbjct: 672 EAAMLALR 679


>gi|296195629|ref|XP_002745473.1| PREDICTED: spermatogenesis-associated protein 5-like, partial
            [Callithrix jacchus]
          Length = 321

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 208/291 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 23   VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 82

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 83   RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 142

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 143  KARAVAPSIIFFDELDALALERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 202

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI ++    +P S DV++ EL   ++  +GA
Sbjct: 203  PDRIDKALMRPGRIDRIIYVPLPDAATRREILKLQFHSMPISDDVDLNELILQTDSYSGA 262

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +CREAA+ A+EE++ A+ I  +H   A+  V P    S +     +Q
Sbjct: 263  EIVAVCREAALLALEEDIQANFIMKRHFTQALSIVTPRIPESLRHFYEDYQ 313



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 125/208 (60%), Gaps = 17/208 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 84  MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 143

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 144 ARAVAPSIIFFDELDALALERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 203

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EIL      M  S  D +
Sbjct: 204 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREILKLQFHSMPIS-DDVD 248

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           +  L + T  + GA++ A+C EAAL+ L
Sbjct: 249 LNELILQTDSYSGAEIVAVCREAALLAL 276


>gi|332158080|ref|YP_004423359.1| cell division protein CDC48 [Pyrococcus sp. NA2]
 gi|331033543|gb|AEC51355.1| cell division protein CDC48 [Pyrococcus sp. NA2]
          Length = 795

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 155/311 (49%), Positives = 215/311 (69%), Gaps = 21/311 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++EVP V W+D+GG  EVK +L EAVEWP K+ EAF+
Sbjct: 484  LKVTRADFYEALKMVEPSALREVLIEVPNVHWDDIGGLEEVKQELKEAVEWPLKYPEAFR 543

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G  PP GIL++GPPG  KTL+A+AVA+E+  NF+AV+GPE+ SKWVGESEK +R +F 
Sbjct: 544  AYGITPPKGILLYGPPGTGKTLLAKAVATESEANFIAVRGPEILSKWVGESEKNIREIFR 603

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VIAATNR
Sbjct: 604  KARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRIINQLLTEMDGIQENTGVVVIAATNR 661

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+ V  P+E  R EIF++H R +P   DV++RELA  +EG TGA
Sbjct: 662  PDILDPALLRPGRFDRLILVPAPDERARFEIFKVHTRNMPLGEDVDLRELARRTEGYTGA 721

Query: 983  DISLICREAAISAIEENLD---------------ASRITMQHLKTAIRHVQPS----EIH 1023
            DI+ +CREAA+ A+ + L+                +++TM+  + A++ + PS     + 
Sbjct: 722  DIAAVCREAAMIAMRKALEKGIITPEMKADEIRQKAKVTMKDFEEALKKIGPSVSKETME 781

Query: 1024 SYKELSAKFQR 1034
             YK +  +F++
Sbjct: 782  YYKRIQEQFKQ 792



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 100/195 (51%), Positives = 136/195 (69%), Gaps = 2/195 (1%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V +ED+GG ++V  ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179 VTYEDIGGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EA   F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R  E  G 
Sbjct: 239 EANAYFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKRS-EVTG- 296

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V  RV++QLL  +DGL  R  V VI ATNRPD +DPAL RPGRFDR + VG P++  R+
Sbjct: 297 EVEKRVVAQLLALMDGLKSRGKVIVIGATNRPDALDPALRRPGRFDREIEVGVPDKKGRK 356

Query: 952 EIFRIHLRKIPCSSD 966
           EI +IH R +P   D
Sbjct: 357 EILQIHTRGMPIEPD 371



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/279 (39%), Positives = 150/279 (53%), Gaps = 32/279 (11%)

Query: 372 TKVYLYPPLNAVSKS-LREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-IS 429
           T+   Y  L  V  S LRE       IE  NV          +GGL +    LK+ +   
Sbjct: 487 TRADFYEALKMVEPSALRE-----VLIEVPNVHW------DDIGGLEEVKQELKEAVEWP 535

Query: 430 SSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESE 489
                   + G+ P KG+LL+GPPGTGKT LA+  A +S  N   V GPE++S+  GESE
Sbjct: 536 LKYPEAFRAYGITPPKGILLYGPPGTGKTLLAKAVATESEANFIAVRGPEILSKWVGESE 595

Query: 490 QALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLV 549
           + + E+F  A Q+AP V+FIDE+DAIAP R      ++ R++  LL  MDG+    GV+V
Sbjct: 596 KNIREIFRKARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRIINQLLTEMDGIQENTGVVV 655

Query: 550 IAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSG 607
           IAATNRPD ++PAL RPGR DR I                 VP+P +  R EI       
Sbjct: 656 IAATNRPDILDPALLRPGRFDRLI----------------LVPAPDERARFEIFKVHTRN 699

Query: 608 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           M     D ++  L+  T G+ GAD+AA+C EAA++ +R+
Sbjct: 700 MPLG-EDVDLRELARRTEGYTGADIAAVCREAAMIAMRK 737



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/217 (43%), Positives = 130/217 (59%), Gaps = 18/217 (8%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P  ++E +       +DI   GGL      ++++I +          LG+ P KGVLL+G
Sbjct: 167 PVKEVEKRMTTGVTYEDI---GGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYG 223

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L EVF  A ++APA++FIDE
Sbjct: 224 PPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDE 283

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNRPD+++PALRRPGR DR
Sbjct: 284 IDAIAPKRSEVTGEVEKRVVAQLLALMDGLKSRGKVIVIGATNRPDALDPALRRPGRFDR 343

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
           EIE+               VP    R EIL     GM
Sbjct: 344 EIEV--------------GVPDKKGRKEILQIHTRGM 366


>gi|299744108|ref|XP_001840883.2| AAA family ATPase [Coprinopsis cinerea okayama7#130]
 gi|298405968|gb|EAU80936.2| AAA family ATPase [Coprinopsis cinerea okayama7#130]
          Length = 789

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 154/303 (50%), Positives = 218/303 (71%), Gaps = 12/303 (3%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            S K   L L++ D + A   VRPSAMR + ++ P V++ ++GGQ EV  +L EAVEWP  
Sbjct: 484  SSKDEGLILDIADLDAALPMVRPSAMRSLFVDTPAVRYSEIGGQAEVIQKLREAVEWPLL 543

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            H EAF+R+G +PP G+L++GPPGCSKT++ARA A E+G+NF+AVKGPEL +K+VGESE+A
Sbjct: 544  HPEAFQRLGVKPPKGVLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKFVGESERA 603

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            VR +F KARA +PSIIFFDEID LA  R   E D  +  + V++ LL E+DG+ + V VT
Sbjct: 604  VREVFRKARAASPSIIFFDEIDALAVSRSASEKDSGASHEGVLTSLLNEMDGVQELVGVT 663

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL 975
            V+AATNRP+ +D AL+RPGR DR+LYVGPP+   REEIF+I L+++  + DVN+RELA L
Sbjct: 664  VVAATNRPEALDSALMRPGRLDRILYVGPPDLAGREEIFKIKLKRMTVAPDVNVRELATL 723

Query: 976  SEGCTGADISLICREAAISAIEENLDASRITMQHL----KTAIRHVQPSEIHSYKELSAK 1031
            +EGC+GA+I+ +C+EAA+  + E+++A  ++ +      K+  R + P+ +       AK
Sbjct: 724  TEGCSGAEITALCQEAALLTMREDMNAPHVSREAFVNAAKSTKRQITPAVL-------AK 776

Query: 1032 FQR 1034
            F R
Sbjct: 777  FAR 779



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/250 (41%), Positives = 155/250 (62%), Gaps = 21/250 (8%)

Query: 405 TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
           +V+   S +GGLSK+   ++D++ I  +        GL+P +G+LLHGPPGTGKT LAR 
Sbjct: 240 SVQDAYSSVGGLSKQIEEIRDLLEIPLTRPDLFKYFGLKPPRGILLHGPPGTGKTHLARA 299

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG- 522
            A  +  ++  +NGPE+ S  +GE+E  L EVF  A   +P +V +DE+DA+ P R+DG 
Sbjct: 300 IASSTQSSVLVINGPELSSAYHGETESKLREVFKEAHAKSPCIVVLDEVDALVPRREDGA 359

Query: 523 GEELSQRMVATLLNLMDGVCRT-----DGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
           G E+ +R+VATLL ++DG+          V+V+A TNRP++I+PALRRPGR DREIEI  
Sbjct: 360 GGEVEKRVVATLLTILDGMGGDDDDSRGKVVVVATTNRPNAIDPALRRPGRFDREIEI-- 417

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                        +P    RL IL+ LL+   H++  S++  L+   HG+VGADL+A+  
Sbjct: 418 ------------GIPDAEARLSILNVLLAKTPHNISQSQLHSLASRAHGYVGADLSAVVR 465

Query: 638 EAALVCLRRY 647
           EA  + ++R+
Sbjct: 466 EAGTIAIKRW 475



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/211 (45%), Positives = 130/211 (61%), Gaps = 20/211 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P KGVLL+GPPG  KT LAR CA +SGVN   V GPE++++  GESE+A+ EVF  
Sbjct: 551 LGVKPPKGVLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKFVGESERAVREVFRK 610

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A  ++P+++F DE+DA+A +R    KD G    + ++ +LLN MDGV    GV V+AATN
Sbjct: 611 ARAASPSIIFFDEIDALAVSRSASEKDSGAS-HEGVLTSLLNEMDGVQELVGVTVVAATN 669

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RP++++ AL RPGRLDR           +L   P   P  A R EI    L  M  +  D
Sbjct: 670 RPEALDSALMRPGRLDR-----------ILYVGP---PDLAGREEIFKIKLKRMTVA-PD 714

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             V  L+  T G  GA++ ALC EAAL+ +R
Sbjct: 715 VNVRELATLTEGCSGAEITALCQEAALLTMR 745



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 129/230 (56%), Gaps = 7/230 (3%)

Query: 774 WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
           +  VGG  +   ++ + +E P    + FK  G +PP GIL+ GPPG  KT +ARA+AS  
Sbjct: 245 YSSVGGLSKQIEEIRDLLEIPLTRPDLFKYFGLKPPRGILLHGPPGTGKTHLARAIASST 304

Query: 834 GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
             + L + GPEL S + GE+E  +R +F +A A +P I+  DE+D L   R ++  G  V
Sbjct: 305 QSSVLVINGPELSSAYHGETESKLREVFKEAHAKSPCIVVLDEVDALVP-RREDGAGGEV 363

Query: 894 SDRVMSQLLVEL-----DGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             RV++ LL  L     D    R  V V+A TNRP+ IDPAL RPGRFDR + +G P+  
Sbjct: 364 EKRVVATLLTILDGMGGDDDDSRGKVVVVATTNRPNAIDPALRRPGRFDREIEIGIPDAE 423

Query: 949 DREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIE 997
            R  I  + L K P + S   +  LA  + G  GAD+S + REA   AI+
Sbjct: 424 ARLSILNVLLAKTPHNISQSQLHSLASRAHGYVGADLSAVVREAGTIAIK 473


>gi|327400638|ref|YP_004341477.1| AAA family ATPase [Archaeoglobus veneficus SNP6]
 gi|327316146|gb|AEA46762.1| AAA family ATPase, CDC48 subfamily [Archaeoglobus veneficus SNP6]
          Length = 734

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 158/310 (50%), Positives = 214/310 (69%), Gaps = 18/310 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   + PSAMREV++EVPK++WED+GG    K +L EAVEWP K+ E F+
Sbjct: 424  LKVTREDFLEALRNIEPSAMREVLVEVPKIRWEDIGGLEHAKQELKEAVEWPLKYPEVFE 483

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +  +PP GIL+FGPPG  KTL+A+AVA+E+  NF++VKGPEL SKWVGESEK VR +F 
Sbjct: 484  TVDIKPPKGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFR 543

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP ++FFDEID LA  RG  +D   V++RV+SQLL ELDG+ +  +V VIAATNR
Sbjct: 544  KARQVAPCVLFFDEIDSLAPRRGGGADS-HVTERVVSQLLTELDGMEELKDVVVIAATNR 602

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGR +R +Y+ PP++  R+EIF+IHLR  P + DV+I ELA  +EG +GA
Sbjct: 603  PDIVDPALLRPGRIERHIYIPPPDKKARKEIFKIHLRGKPLADDVSIDELAEKTEGYSGA 662

Query: 983  DISLICREAAISAIEENLDAS-------------RITMQHLKTAIRHVQPS----EIHSY 1025
            DI  +CREA + AI E L                +IT +H + A+  V+PS    ++  Y
Sbjct: 663  DIEAVCREAGMLAIREALKPGLTREEAKELAKKIKITKKHFEKALEKVKPSLTKDDVKRY 722

Query: 1026 KELSAKFQRL 1035
            +++   F ++
Sbjct: 723  EQIIENFHKM 732



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/283 (45%), Positives = 182/283 (64%), Gaps = 21/283 (7%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            +K RP  + EV   VP V +ED+GG +     + E +E P KH E F+R+G  PP G+L+
Sbjct: 163  LKDRP--VEEVTRAVPNVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIDPPKGVLL 220

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+A+AVA+E   +F+++ GPE+ SK+ GESE+ +R +F +A+ NAPSIIF 
Sbjct: 221  YGPPGTGKTLIAKAVANEVNAHFISISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFI 280

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV++QLL  +DGL  R +V VIAATNRPD +DPAL RPG
Sbjct: 281  DEIDSIAPKR-EEVTG-EVERRVVAQLLALMDGLEARGDVIVIAATNRPDALDPALRRPG 338

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + +G P+   R+EI  IH R +P + DVN+ ELA  + G  GAD+  +C+EAA+ 
Sbjct: 339  RFDREIEIGVPDREGRKEILEIHTRGMPLAEDVNLDELADHTIGFVGADLEALCKEAAMH 398

Query: 995  AI-----------------EENLDASRITMQHLKTAIRHVQPS 1020
            A+                 EE L+  ++T +    A+R+++PS
Sbjct: 399  ALRKRMEKGEIDIEAEEIPEEVLENLKVTREDFLEALRNIEPS 441



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 154/235 (65%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++   +
Sbjct: 183 IGGLKRELRLVREMIELPLKHPELFQRLGIDPPKGVLLYGPPGTGKTLIAKAVANEVNAH 242

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 243 FISISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRVV 302

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATNRPD+++PALRRPGR DREIEI               V
Sbjct: 303 AQLLALMDGLEARGDVIVIAATNRPDALDPALRRPGRFDREIEI--------------GV 348

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  +  D  ++ L+  T GFVGADL ALC EAA+  LR+
Sbjct: 349 PDREGRKEILEIHTRGMPLA-EDVNLDELADHTIGFVGADLEALCKEAAMHALRK 402



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 17/235 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      LK+ +           ++ ++P KG+LL GPPGTGKT LA+  A++S  N
Sbjct: 458 IGGLEHAKQELKEAVEWPLKYPEVFETVDIKPPKGILLFGPPGTGKTLLAKAVANESNAN 517

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRM 530
             +V GPE++S+  GESE+ + E+F  A Q AP V+F DE+D++AP R  G +  +++R+
Sbjct: 518 FISVKGPELLSKWVGESEKHVREMFRKARQVAPCVLFFDEIDSLAPRRGGGADSHVTERV 577

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ LL  +DG+     V+VIAATNRPD ++PAL RPGR++R I I               
Sbjct: 578 VSQLLTELDGMEELKDVVVIAATNRPDIVDPALLRPGRIERHIYI--------------P 623

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            P    R EI    L G   +  D  ++ L+  T G+ GAD+ A+C EA ++ +R
Sbjct: 624 PPDKKARKEIFKIHLRGKPLA-DDVSIDELAEKTEGYSGADIEAVCREAGMLAIR 677


>gi|198434311|ref|XP_002132151.1| PREDICTED: similar to spermatogenesis associated 5 [Ciona
            intestinalis]
          Length = 775

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 145/285 (50%), Positives = 213/285 (74%), Gaps = 2/285 (0%)

Query: 756  KVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMF 815
            +V PSAMRE+I++VPKV+W D+GG + VK +L +A+EWP K+  AF+R+G  PP G+LM+
Sbjct: 488  EVPPSAMRELIIQVPKVQWCDIGGNKFVKKKLQQAIEWPLKNPAAFQRLGIDPPRGVLMY 547

Query: 816  GPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFD 875
            GPPGCSKTL A+A+A+E+GLNF+++KGPELFSK+VG+SE+++R +FAKAR+ AP+IIFFD
Sbjct: 548  GPPGCSKTLTAKALATESGLNFISIKGPELFSKYVGDSERSIRQIFAKARSAAPAIIFFD 607

Query: 876  EIDGLAAIRGK--ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRP 933
            E+D LA  RG+  +  G +V+DRV++ +L E+DG+ QR +V V+AATNRPD ID ALLRP
Sbjct: 608  ELDALAIERGRFVQDAGNAVADRVLAAMLTEMDGVEQRHDVIVVAATNRPDMIDKALLRP 667

Query: 934  GRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAI 993
            GR D+++ V  P+   R EIFRI  RK+P + D+++  L   +E  +GA+I  +CREAA+
Sbjct: 668  GRIDKIILVPLPDAETRREIFRIQFRKMPIADDISMEALVAKTERYSGAEICSVCREAAL 727

Query: 994  SAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHS 1038
             A++ENL+ S +T QH  +A+  V P       ++  ++ R + +
Sbjct: 728  EALDENLECSHVTWQHFISALESVIPQTSEEKAKMYDEYGRTLRT 772



 Score =  182 bits (462), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/294 (36%), Positives = 175/294 (59%), Gaps = 28/294 (9%)

Query: 373 KVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSV 432
           KV+++ P   +  S   G   + +     ++++++ D   +GGL K+  IL DI+I   +
Sbjct: 211 KVFVFTPKTNIYIS---GIKTSEETAKNKLKSSIKFD--DIGGLEKQKQILTDIVIFP-I 264

Query: 433 KSTL--SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQ 490
           K+ L  +  G++P +G+LL GPPGTGK+ LA+  A +   N+  + G EV+S+ +GESE+
Sbjct: 265 KNPLPFNKAGVKPVRGILLCGPPGTGKSMLAKSIAGELNANMMLLRGTEVMSRFFGESEK 324

Query: 491 ALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV-CRTDGVLV 549
            L  VFD A + +P +V ID+++++ P R     ++ +R+VA+ +++MD +    + V+V
Sbjct: 325 QLSSVFDEARKRSPCIVVIDDVESLCPRRDASRSDVEKRIVASFISIMDALNSWEEDVVV 384

Query: 550 IAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME 609
           IA T+R +SI+PALRR GR DRE+++               +PS + R+EIL  LL+  E
Sbjct: 385 IATTSRLESIDPALRRSGRFDREVDV--------------GIPSSSDRMEILIKLLAKKE 430

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK-----IQTSSDVLH 658
           H +   ++E L+   HG+VGADL A+C EA L  ++R +      I TS DV H
Sbjct: 431 HRISREQMEALADQAHGYVGADLCAVCGEAGLHAVKRCTSTDDDVIITSDDVTH 484



 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 19/215 (8%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           +    LG+ P +GVL++GPPG  KT  A+  A +SG+N  ++ GPE+ S+  G+SE+++ 
Sbjct: 531 AAFQRLGIDPPRGVLMYGPPGCSKTLTAKALATESGLNFISIKGPELFSKYVGDSERSIR 590

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLV 549
           ++F  A  +APA++F DELDA+A  R    +D G  ++ R++A +L  MDGV +   V+V
Sbjct: 591 QIFAKARSAAPAIIFFDELDALAIERGRFVQDAGNAVADRVLAAMLTEMDGVEQRHDVIV 650

Query: 550 IAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME 609
           +AATNRPD I+ AL RPGR+D+ I + +              P    R EI       M 
Sbjct: 651 VAATNRPDMIDKALLRPGRIDKIILVPL--------------PDAETRREIFRIQFRKMP 696

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            +  D  +E L   T  + GA++ ++C EAAL  L
Sbjct: 697 IA-DDISMEALVAKTERYSGAEICSVCREAALEAL 730



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 145/254 (57%), Gaps = 7/254 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            +K++D+GG  + K  L + V +P K+   F + G +P  GIL+ GPPG  K+++A+++A 
Sbjct: 241  IKFDDIGGLEKQKQILTDIVIFPIKNPLPFNKAGVKPVRGILLCGPPGTGKSMLAKSIAG 300

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   N + ++G E+ S++ GESEK + S+F +AR  +P I+  D+++ L   R  ++   
Sbjct: 301  ELNANMMLLRGTEVMSRFFGESEKQLSSVFDEARKRSPCIVVIDDVESLCPRR--DASRS 358

Query: 892  SVSDRVMSQLLVELDGLHQ-RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
             V  R+++  +  +D L+    +V VIA T+R + IDPAL R GRFDR + VG P+ +DR
Sbjct: 359  DVEKRIVASFISIMDALNSWEEDVVVIATTSRLESIDPALRRSGRFDREVDVGIPSSSDR 418

Query: 951  EEIF-RIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL---DASRIT 1006
             EI  ++  +K    S   +  LA  + G  GAD+  +C EA + A++      D   IT
Sbjct: 419  MEILIKLLAKKEHRISREQMEALADQAHGYVGADLCAVCGEAGLHAVKRCTSTDDDVIIT 478

Query: 1007 MQHLKTAIRHVQPS 1020
               +   ++ V PS
Sbjct: 479  SDDVTHGLKEVPPS 492


>gi|195114758|ref|XP_002001934.1| GI14498 [Drosophila mojavensis]
 gi|193912509|gb|EDW11376.1| GI14498 [Drosophila mojavensis]
          Length = 802

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 148/276 (53%), Positives = 203/276 (73%), Gaps = 1/276 (0%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            LEL D + A  +V+PSAMREV++E P V W D+GGQ  ++  L +A+EWP  H + F+R+
Sbjct: 511  LELRDLQAALTQVKPSAMREVLIESPNVLWSDIGGQAALRLTLQQAIEWPLLHADKFQRL 570

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP G+LMFGPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR +F KA
Sbjct: 571  GIKPPRGVLMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKA 630

Query: 865  RANAPSIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            R  AP+I+FFDEID +   R + S  G SV +RV++QLL ELDG+    NVT++AATNRP
Sbjct: 631  RQVAPAIVFFDEIDAIGGERSEGSAGGSSVKERVLTQLLTELDGVDALHNVTIVAATNRP 690

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            D ID ALLRPGR DR+ YVG P    R EI  I LR +P + DV + +L  L+EG +GA+
Sbjct: 691  DMIDKALLRPGRIDRVCYVGLPEAAARREILLIKLRPMPLAEDVIVDQLVELTEGYSGAE 750

Query: 984  ISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            I  +C EAA+SA+E++ +A  +  +H ++A+  V+P
Sbjct: 751  IQAVCHEAALSALEQSFEAELVHWRHFESALATVKP 786



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 124/214 (57%), Gaps = 24/214 (11%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P +GVL+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF  
Sbjct: 570 LGIKPPRGVLMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRK 629

Query: 499 ASQSAPAVVFIDELDAIAPARKD---GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q APA+VF DE+DAI   R +   GG  + +R++  LL  +DGV     V ++AATNR
Sbjct: 630 ARQVAPAIVFFDEIDAIGGERSEGSAGGSSVKERVLTQLLTELDGVDALHNVTIVAATNR 689

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM---EHSL 612
           PD I+ AL RPGR+DR   + +              P  A R EIL   L  M   E  +
Sbjct: 690 PDMIDKALLRPGRIDRVCYVGL--------------PEAAARREILLIKLRPMPLAEDVI 735

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +D  VE     T G+ GA++ A+C+EAAL  L +
Sbjct: 736 VDQLVEL----TEGYSGAEIQAVCHEAALSALEQ 765



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 133/247 (53%), Gaps = 29/247 (11%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLAR-LCA---- 465
           +K+GGL K+  ++++ +  +     +   G++ ++G+LL+G  G GK+ +   +C+    
Sbjct: 276 AKIGGLDKQIQLVEESMDFALGYKPMPK-GIKISRGLLLYGASGCGKSLICEAMCSSAQR 334

Query: 466 HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP--AVVFIDELDAIAPARKDGG 523
            +    +  ++  EV S+  GE+EQ L   F+ A    P  +++ ++++  + P  K   
Sbjct: 335 RNKNAQIINISSGEVFSKFLGETEQKLAAYFERAYSHYPHPSLIILEDIHTLCP--KQDS 392

Query: 524 EELSQRMVATLLNLMDGV---CR--TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
            +L +R    LL+ +D +   CR  T    ++A +++ D++ P++RR GRLD E+E+   
Sbjct: 393 NDLVKRASLALLSQLDLLSSGCRVETSRTFLLATSSQIDALHPSIRRAGRLDCELEL--- 449

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                        P+PA R EIL   L  +EH++ D+E+E+++  THG+VGADL  L   
Sbjct: 450 -----------GPPNPAARREILQCQLQQLEHNIKDAELEHIASITHGYVGADLVNLVYT 498

Query: 639 AALVCLR 645
           A L  L+
Sbjct: 499 ATLATLK 505



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 117/225 (52%), Gaps = 11/225 (4%)

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEA-----GLNFLAVKGPELFSKWVGESEKAVRS 859
            G +   G+L++G  GC K+L+  A+ S A         + +   E+FSK++GE+E+ + +
Sbjct: 304  GIKISRGLLLYGASGCGKSLICEAMCSSAQRRNKNAQIINISSGEVFSKFLGETEQKLAA 363

Query: 860  LFAKARANAP--SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVI 917
             F +A ++ P  S+I  ++I  L   +         S  ++SQL +   G     + T +
Sbjct: 364  YFERAYSHYPHPSLIILEDIHTLCPKQDSNDLVKRASLALLSQLDLLSSGCRVETSRTFL 423

Query: 918  AATN-RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACL 975
             AT+ + D + P++ R GR D  L +GPPN   R EI +  L+++  +  D  +  +A +
Sbjct: 424  LATSSQIDALHPSIRRAGRLDCELELGPPNPAARREILQCQLQQLEHNIKDAELEHIASI 483

Query: 976  SEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            + G  GAD+  +   A ++ +++  +   + ++ L+ A+  V+PS
Sbjct: 484  THGYVGADLVNLVYTATLATLKD--EPRPLELRDLQAALTQVKPS 526


>gi|257053680|ref|YP_003131513.1| AAA family ATPase, CDC48 subfamily [Halorhabdus utahensis DSM 12940]
 gi|256692443|gb|ACV12780.1| AAA family ATPase, CDC48 subfamily [Halorhabdus utahensis DSM 12940]
          Length = 742

 Score =  320 bits (819), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 154/308 (50%), Positives = 209/308 (67%), Gaps = 3/308 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W+DVGG    K  + E++EWP    E F+R+G  P
Sbjct: 436  DFKGALNEVSPSAMREVLVELPKISWDDVGGLESAKNDVQESIEWPMTTPEKFERMGVAP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDE+D LA  RG +  G +VS+RV++QLL E+DGL    +V VI ATNRPD IDP
Sbjct: 556  PTVVFFDELDSLAPGRGGQGSGSNVSERVVNQLLTEMDGLEDMEDVMVIGATNRPDMIDP 615

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+Y+G P+   REEI  IH    P S DV++RELA ++EG  G+D+  I 
Sbjct: 616  ALIRSGRFDRLVYIGEPDVDGREEILDIHTDDSPLSPDVSLRELAEITEGYVGSDLESIA 675

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQ 1048
            REAAI A+ E+ DA  I M H ++A+  V+P+     +E    F+++            Q
Sbjct: 676  REAAIQALRESEDAEEIGMAHFRSALEGVRPTVTDDIREY---FEQMEDQFKGGGPDSRQ 732

Query: 1049 LRPSKSIG 1056
             R S  IG
Sbjct: 733  PRGSDRIG 740



 Score =  223 bits (568), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 162/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + FK++G  PP+G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLENEIQRVREMVELPMKHPQIFKKLGIEPPSGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVVVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILKIHTRGMPLSDDVDLPGLAEDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   I     K A+  V PS
Sbjct: 424  PSLIDRMIIKRDDFKGALNEVSPS 447



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P  GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLENEIQRVREMVELPMKHPQIFKKLGIEPPSGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVVVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D ++  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILKIHTRGMPLS-DDVDLPGLAEDTHGFVGADIESLTKEAAMKALRRY 411



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/238 (39%), Positives = 134/238 (56%), Gaps = 22/238 (9%)

Query: 413 LGGL-SKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL S +  + + I    +       +G+ P  GVLL+GPPGTGKT +A+  A+++  N
Sbjct: 464 VGGLESAKNDVQESIEWPMTTPEKFERMGVAPPSGVLLYGPPGTGKTLMAKAVANETDAN 523

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             +V GP+++S+  GESE+A+ + F  A Q AP VVF DELD++AP R  +  G  +S+R
Sbjct: 524 FISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVVFFDELDSLAPGRGGQGSGSNVSER 583

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL  MDG+   + V+VI ATNRPD I+PAL R GR DR + I              
Sbjct: 584 VVNQLLTEMDGLEDMEDVMVIGATNRPDMIDPALIRSGRFDRLVYI-------------- 629

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
             P    R EIL       + S L  +V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 630 GEPDVDGREEILDI---HTDDSPLSPDVSLRELAEITEGYVGSDLESIAREAAIQALR 684


>gi|401410306|ref|XP_003884601.1| putative ATPase, AAA family domain-containing protein [Neospora
            caninum Liverpool]
 gi|325119019|emb|CBZ54571.1| putative ATPase, AAA family domain-containing protein [Neospora
            caninum Liverpool]
          Length = 1165

 Score =  320 bits (819), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 205/562 (36%), Positives = 295/562 (52%), Gaps = 105/562 (18%)

Query: 486  GESEQALHEV---FDSASQSAPA-------VVFIDELDAIAPARKDGGEELSQRMVATLL 535
            GES Q   EV     + +  +PA       ++FIDE+DA+ P R++   E+ +R V  LL
Sbjct: 622  GESTQTCEEVESRRGAHASDSPATLVGGGTLLFIDEIDAVCPKREEA-TEVGRRAVCALL 680

Query: 536  NLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPA 595
            + +DG+     + V+AATN P  ++ A+RR GRL+R+IE+               VP+  
Sbjct: 681  SCLDGLATDGSLFVLAATNHPHLLDDAIRRAGRLERDIEV--------------GVPTAE 726

Query: 596  QRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
            +R EIL  LL  + H+L D +V+            +L+ LC       LR          
Sbjct: 727  ERREILAKLLQNVPHNLRDEDVD------------ELSGLCQAFVPADLRLL-------- 766

Query: 656  VLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGT 715
                                       +T ++   L            +LL + LP  G 
Sbjct: 767  ---------------------------VTTAATQAL-----------KALLPAELPHAGV 788

Query: 716  VSEIADNFHNGVSD--SSG-GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKV 772
              +  +   N   +  SSG G   +       + L  F +A   V+PSA++ V +EVP V
Sbjct: 789  SHDRGEEPQNERKEQASSGLGALATLPDEKQPVTLKHFRRALRHVKPSALKSVAIEVPHV 848

Query: 773  KWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASE 832
            KW+++GG   VK  L E VEWP K    F+++   PP G+L++GPPGCSKT+MA+AVA+E
Sbjct: 849  KWDEIGGYASVKKSLQECVEWPIKFAHLFRQLKVAPPRGVLLYGPPGCSKTMMAKAVATE 908

Query: 833  AGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS 892
            + +NF++VKGPELFSKWVGESE+AVR +F KAR NAP +IFFDE+D +   R +  D   
Sbjct: 909  SKMNFISVKGPELFSKWVGESERAVREVFRKARQNAPCVIFFDEVDAMGGDR-ETGDAGG 967

Query: 893  VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
            V  RV+SQLL E+DG+     V VIAATNRPD +D ALLRPGR DRL+YV  P+   R E
Sbjct: 968  VDSRVLSQLLNEMDGIGPVREVVVIAATNRPDLLDAALLRPGRLDRLVYVPLPDREARRE 1027

Query: 953  IFRIHLRKIPCSSDVNIR------------ELACLSEGCTGADISLICREAAISAIEENL 1000
            I    L+ +P      +R             LA  + G +GA+I +ICREA+++A+ E +
Sbjct: 1028 IALKMLKNMPVKFSGQVRGDQNGQGTTCADSLARATHGYSGAEIVMICREASMAAVREAV 1087

Query: 1001 DASRITMQHLKTAIRHVQPSEI 1022
              +R + +HL+    H +PS  
Sbjct: 1088 --ARFSSKHLQ----HQRPSHF 1103



 Score =  149 bits (376), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 140/259 (54%), Gaps = 18/259 (6%)

Query: 439  LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            L + P +GVLL+GPPG  KT +A+  A +S +N  +V GPE+ S+  GESE+A+ EVF  
Sbjct: 880  LKVAPPRGVLLYGPPGCSKTMMAKAVATESKMNFISVKGPELFSKWVGESERAVREVFRK 939

Query: 499  ASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            A Q+AP V+F DE+DA+   R+ G    +  R+++ LLN MDG+     V+VIAATNRPD
Sbjct: 940  ARQNAPCVIFFDEVDAMGGDRETGDAGGVDSRVLSQLLNEMDGIGPVREVVVIAATNRPD 999

Query: 558  SIEPALRRPGRLDREIEIDM-------SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
             ++ AL RPGRLDR + + +            +LKN P                + G ++
Sbjct: 1000 LLDAALLRPGRLDRLVYVPLPDREARREIALKMLKNMPVK----------FSGQVRGDQN 1049

Query: 611  SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHS 670
                +  + L+ ATHG+ GA++  +C EA++  +R      +S  + H   + F  +   
Sbjct: 1050 GQGTTCADSLARATHGYSGAEIVMICREASMAAVREAVARFSSKHLQHQRPSHFSEKAQQ 1109

Query: 671  DTMLQDSDCSRNITESSRD 689
              +    + ++ + ES  D
Sbjct: 1110 IPVGTAEERTQFVQESPED 1128



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 23/32 (71%)

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASE 832
           F+  G  PP G+L++GPPG  KT +ARAVA E
Sbjct: 451 FQAYGVPPPKGVLLYGPPGSGKTHLARAVAEE 482



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 29/47 (61%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVS 482
             + G+ P KGVLL+GPPG+GKT LAR  A +  + +  VN    VS
Sbjct: 451 FQAYGVPPPKGVLLYGPPGSGKTHLARAVAEEIQIVVQEVNVGRAVS 497


>gi|328707441|ref|XP_001947817.2| PREDICTED: spermatogenesis-associated protein 5-like [Acyrthosiphon
            pisum]
          Length = 758

 Score =  319 bits (818), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 145/268 (54%), Positives = 205/268 (76%), Gaps = 1/268 (0%)

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            A  +V+PSA++EV+++VP VKW D+GGQ ++K +L + VEWP KH EAFKR+G  PP G+
Sbjct: 473  ALTQVKPSAIKEVMVQVPNVKWTDIGGQDDIKLKLKQVVEWPLKHPEAFKRMGITPPRGV 532

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L++GPPGCSKT++A+AVA+E+  NF++VKGPELF+K+VGESE+AVR  F +AR+ AP ++
Sbjct: 533  LLYGPPGCSKTMIAKAVATESHFNFISVKGPELFNKYVGESERAVRETFMRARSVAPCVV 592

Query: 873  FFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALL 931
            FFDE+DGLA  RG    G S V  RV++QLL ELDG+    NVT++AATNRPD ID ALL
Sbjct: 593  FFDELDGLAGERGIGDSGSSGVHSRVLAQLLTELDGVQPLGNVTILAATNRPDLIDSALL 652

Query: 932  RPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREA 991
            RPGR DR +YV  P++T R EI R+ L K+P S+DV+I +L  L+E  +GA++  IC EA
Sbjct: 653  RPGRLDRKVYVPLPDKTTRFEILRLKLSKMPTSTDVDINKLVELTENYSGAEVIAICHEA 712

Query: 992  AISAIEENLDASRITMQHLKTAIRHVQP 1019
            ++ A+E+N+ A ++ M H + A++ ++P
Sbjct: 713  SLKALEDNIKAEKVEMNHFEVALQSLRP 740



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 118/209 (56%), Gaps = 18/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P +GVLL+GPPG  KT +A+  A +S  N  +V GPE+ ++  GESE+A+ E F  
Sbjct: 524 MGITPPRGVLLYGPPGCSKTMIAKAVATESHFNFISVKGPELFNKYVGESERAVRETFMR 583

Query: 499 ASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A   AP VVF DELD +A  R     G   +  R++A LL  +DGV     V ++AATNR
Sbjct: 584 ARSVAPCVVFFDELDGLAGERGIGDSGSSGVHSRVLAQLLTELDGVQPLGNVTILAATNR 643

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+ AL RPGRLDR++ + +              P    R EIL   LS M  S  D 
Sbjct: 644 PDLIDSALLRPGRLDRKVYVPL--------------PDKTTRFEILRLKLSKMPTS-TDV 688

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCL 644
           ++  L   T  + GA++ A+C+EA+L  L
Sbjct: 689 DINKLVELTENYSGAEVIAICHEASLKAL 717



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 27/239 (11%)

Query: 403 QATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLAR 462
           +  +   IS +GG+   Y  + ++I  S  +            G LLHG  GTGKT LA 
Sbjct: 241 KVNITYPISDVGGMCDIYEKVMNVIQKSKFQGVC---------GFLLHGISGTGKTLLAN 291

Query: 463 LCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG 522
              +    ++  + G E++S+ YG+SE  L   F+ A  ++P+++ ID L+ +  ++ + 
Sbjct: 292 TITYSLKRHVVEIKGWEILSKIYGQSEAKLKLFFEEAIINSPSIILIDRLETL--SKSNE 349

Query: 523 GEELSQRMVATLLNLMDGVCRT--DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
             +L +R+V TL  + D +  T  +GV +I  T+   S++  LRRPGR D EIE+     
Sbjct: 350 SSDLERRIVNTLQTMFDLLKSTKHNGVAIIGTTSSLSSVDSNLRRPGRFDYEIEL----- 404

Query: 581 FSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
                     VP+  QR +IL   LS ++  + + E+  ++    GFVGADL A+ N A
Sbjct: 405 ---------PVPNELQRKDILIKQLSHIDQEISEDEIISIAYRAQGFVGADLLAVVNRA 454



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 20/250 (8%)

Query: 776  DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGL 835
            DVGG  ++  ++M  ++     +  F+ +      G L+ G  G  KTL+A  +      
Sbjct: 250  DVGGMCDIYEKVMNVIQ-----KSKFQGV-----CGFLLHGISGTGKTLLANTITYSLKR 299

Query: 836  NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 895
            + + +KG E+ SK  G+SE  ++  F +A  N+PSII  D ++ L+    K ++   +  
Sbjct: 300  HVVEIKGWEILSKIYGQSEAKLKLFFEEAIINSPSIILIDRLETLS----KSNESSDLER 355

Query: 896  RVMSQLLVELDGLH--QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
            R+++ L    D L   +   V +I  T+    +D  L RPGRFD  + +  PNE  R++I
Sbjct: 356  RIVNTLQTMFDLLKSTKHNGVAIIGTTSSLSSVDSNLRRPGRFDYEIELPVPNELQRKDI 415

Query: 954  FRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKT 1012
                L  I    S+  I  +A  ++G  GAD+  +   A   A   +++   +T +H+ +
Sbjct: 416  LIKQLSHIDQEISEDEIISIAYRAQGFVGADLLAVVNRAQTEA---SINNENVTYRHMCS 472

Query: 1013 AIRHVQPSEI 1022
            A+  V+PS I
Sbjct: 473  ALTQVKPSAI 482


>gi|291234269|ref|XP_002737071.1| PREDICTED: valosin-containing protein-like [Saccoglossus kowalevskii]
          Length = 906

 Score =  318 bits (816), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 148/287 (51%), Positives = 206/287 (71%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +++PSAMRE+ ++VPKV W D+GGQ  +K +L +AVEWP +H E F R+G  P
Sbjct: 614  DFVFALKEIKPSAMREITIDVPKVLWTDIGGQAIIKQKLRQAVEWPLRHPEVFHRMGIEP 673

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPGCSKT++ +A+A+E  LNF+AVKGPELFSKWVGESE+AVR +F KARA +
Sbjct: 674  PQGVLLYGPPGCSKTMIVKALATETQLNFIAVKGPELFSKWVGESERAVREVFRKARAAS 733

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+FFDEID LA+ RG  S    V+DRV++QLL ELDG+ +  +VT++AATNRPD ID 
Sbjct: 734  PAIVFFDEIDALASSRGGSSGSGQVTDRVLAQLLTELDGIEKLTDVTIVAATNRPDVIDK 793

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR+LYV  P+E  R EI +I  RK+P  SDV++  L   +   +GA++  +C
Sbjct: 794  ALLRPGRIDRILYVPLPDEQTRREILQIQFRKMPIGSDVSLESLVGNTGRYSGAEVVAVC 853

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRL 1035
             EAA++A++E++ A  I  +H K A+  V P       E   +++ +
Sbjct: 854  HEAALAAMQEDIHAEFIMERHFKQALLAVTPRITEDLIEFYEQYKDI 900



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 110/245 (44%), Positives = 161/245 (65%), Gaps = 18/245 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLSK+  IL++++ +         SLG+ P +GVLL+GPPGTGKT +A+  A+++   
Sbjct: 370 IGGLSKQLEILREMVELPLRSPEVFESLGIVPPRGVLLYGPPGTGKTLIAKAIANETKAY 429

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T+NGPEV+S+ YGE+E  L E+F  + + APAV+FIDE+DA+ P R++   EL +R+V
Sbjct: 430 FTTINGPEVLSKFYGETESKLREIFKESERQAPAVIFIDEIDALCPKRENVHSELEKRIV 489

Query: 532 ATLLNLMDGVC---RTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           ATLL LMDG+     T  V+V+ ATNRPDSI+ ALRRPGR DR+IEI             
Sbjct: 490 ATLLTLMDGMSSGNSTGHVIVLGATNRPDSIDTALRRPGRFDRDIEI------------- 536

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            ++P+   R +IL  LL  M H L D +++ ++ + HG+VGADLAA+C EA L   +++ 
Sbjct: 537 -SIPNMKDRKDILQKLLLHMPHDLTDLDIDSIAESAHGYVGADLAAVCKEAGLHAFKKHK 595

Query: 649 KIQTS 653
           ++  S
Sbjct: 596 RLAVS 600



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/233 (38%), Positives = 143/233 (61%), Gaps = 6/233 (2%)

Query: 771 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
           +V +  +GG  +    L E VE P +  E F+ +G  PP G+L++GPPG  KTL+A+A+A
Sbjct: 364 EVGYFSIGGLSKQLEILREMVELPLRSPEVFESLGIVPPRGVLLYGPPGTGKTLIAKAIA 423

Query: 831 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
           +E    F  + GPE+ SK+ GE+E  +R +F ++   AP++IF DEID L   R  E+  
Sbjct: 424 NETKAYFTTINGPEVLSKFYGETESKLREIFKESERQAPAVIFIDEIDALCPKR--ENVH 481

Query: 891 VSVSDRVMSQLLVELDGL---HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             +  R+++ LL  +DG+   +   +V V+ ATNRPD ID AL RPGRFDR + +  PN 
Sbjct: 482 SELEKRIVATLLTLMDGMSSGNSTGHVIVLGATNRPDSIDTALRRPGRFDRDIEISIPNM 541

Query: 948 TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEEN 999
            DR++I +  L  +P   +D++I  +A  + G  GAD++ +C+EA + A +++
Sbjct: 542 KDRKDILQKLLLHMPHDLTDLDIDSIAESAHGYVGADLAAVCKEAGLHAFKKH 594



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 120/209 (57%), Gaps = 17/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P +GVLL+GPPG  KT + +  A ++ +N   V GPE+ S+  GESE+A+ EVF  
Sbjct: 669 MGIEPPQGVLLYGPPGCSKTMIVKALATETQLNFIAVKGPELFSKWVGESERAVREVFRK 728

Query: 499 ASQSAPAVVFIDELDAIA--PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A  ++PA+VF DE+DA+A       G  +++ R++A LL  +DG+ +   V ++AATNRP
Sbjct: 729 ARAASPAIVFFDEIDALASSRGGSSGSGQVTDRVLAQLLTELDGIEKLTDVTIVAATNRP 788

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR + + +              P    R EIL      M     D  
Sbjct: 789 DVIDKALLRPGRIDRILYVPL--------------PDEQTRREILQIQFRKMPIG-SDVS 833

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           +E L   T  + GA++ A+C+EAAL  ++
Sbjct: 834 LESLVGNTGRYSGAEVVAVCHEAALAAMQ 862


>gi|76802176|ref|YP_327184.1| AAA-type ATPase (transitional ATPase homolog) [Natronomonas pharaonis
            DSM 2160]
 gi|76558041|emb|CAI49627.1| AAA-type ATPase (CDC48 subfamily) [Natronomonas pharaonis DSM 2160]
          Length = 740

 Score =  318 bits (816), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 154/282 (54%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PKV W+DVGG  E K Q+ E+VEWP    E F R+G  P
Sbjct: 436  DFRGALNEVDPSAMREVLVELPKVSWDDVGGLTEAKEQVQESVEWPMNAGEKFSRMGIEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPGRGGEV-GSNVSERVVNQLLTELDGLEEMDDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG P+   RE+I RIH    P + DV++RELA +++G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMVGEPDLDGREKILRIHTGDTPLAPDVSLRELAEMTDGYVGSDLESIT 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ DA  + M+H + A+  V+P+   +I +Y E
Sbjct: 675  REAAIEALREDDDAEAVEMRHFREAVESVRPTITDDIRNYYE 716



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET R+
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P + DV++ ++A  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLADDVDLDKMADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   I  Q  + A+  V PS
Sbjct: 424  PSLIDRMIIKRQDFRGALNEVDPS 447



 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/236 (45%), Positives = 154/236 (65%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  +  D +++ ++  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGRKEILQIHTRGMPLA-DDVDLDKMADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FSRMGIEPPSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P ++F DELD++AP R  GGE    +S+R+V  LL  +DG+   D V+VI A
Sbjct: 548 FRKARQVSPTIIFFDELDSLAPGR--GGEVGSNVSERVVNQLLTELDGLEEMDDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + +                P    R +IL  + +G     
Sbjct: 606 TNRPDMIDPALIRSGRFDRLVMV--------------GEPDLDGREKILR-IHTGDTPLA 650

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D  +  L+  T G+VG+DL ++  EAA+  LR
Sbjct: 651 PDVSLRELAEMTDGYVGSDLESITREAAIEALR 683


>gi|345005095|ref|YP_004807948.1| AAA ATPase [halophilic archaeon DL31]
 gi|344320721|gb|AEN05575.1| AAA family ATPase, CDC48 subfamily [halophilic archaeon DL31]
          Length = 740

 Score =  318 bits (815), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 152/289 (52%), Positives = 207/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ WEDVGG  + K Q+ EAVEWP  + E F R+G   
Sbjct: 436  DFQGALNEVEPSAMREVLVELPKITWEDVGGLEDPKQQVKEAVEWPLSNPEKFDRMGIEA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++++GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISIRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL +   V VIAATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPSRGQEM-GNNVSERVVNQLLTELDGLEEMGEVMVIAATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P+E  R++I  IH    P S DV+++E+A +++G  G+D+  IC
Sbjct: 615  ALIRSGRFDRLVLIGAPDEVGRKKILDIHTEDTPLSPDVSLKEIAEITDGYVGSDLESIC 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHS----YKELSAKFQ 1033
            REAAI A+ E+ DA  + M H + AI  V+P+        Y+E+  +F+
Sbjct: 675  REAAIEALRESDDADDVEMSHFRKAIESVRPTITEDLMSYYEEVEKEFR 723



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG  +   ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLEDEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+ ++PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLDSRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            E+ +IH R +P S  V++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EVLQIHTRGMPLSDGVDLDHLADETHGFVGADIESLGKEAAMKALRRYL 412



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/237 (45%), Positives = 153/237 (64%), Gaps = 18/237 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLEDEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A   +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLDSRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R E+L     GM   L D  ++++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEVLQIHTRGM--PLSDGVDLDHLADETHGFVGADIESLGKEAAMKALRRY 411



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 127/213 (59%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+   KGVLL+GPPGTGKT +A+  A+++  N  ++ GP+++S+  GESE+A+ + 
Sbjct: 488 FDRMGIEAPKGVLLYGPPGTGKTLMAKAVANETNANFISIRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q +P ++F DELD++AP+R ++ G  +S+R+V  LL  +DG+     V+VIAATN
Sbjct: 548 FRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDGLEEMGEVMVIAATN 607

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PAL R GR DR + I                P    R +IL       E + L 
Sbjct: 608 RPDMIDPALIRSGRFDRLVLI--------------GAPDEVGRKKILDI---HTEDTPLS 650

Query: 615 SEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            +V    +A  T G+VG+DL ++C EAA+  LR
Sbjct: 651 PDVSLKEIAEITDGYVGSDLESICREAAIEALR 683


>gi|154418550|ref|XP_001582293.1| ATPase, AAA family protein [Trichomonas vaginalis G3]
 gi|121916527|gb|EAY21307.1| ATPase, AAA family protein [Trichomonas vaginalis G3]
          Length = 680

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 151/285 (52%), Positives = 211/285 (74%), Gaps = 3/285 (1%)

Query: 752  KARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTG 811
            KA  +V+P+++R + LE+P VKW D+GG  +VK +L E+V  P +  EAF R+G RPP G
Sbjct: 391  KALSRVKPASLRHITLEIPTVKWSDIGGYEDVKQKLKESVTLPLEKPEAFTRLGVRPPRG 450

Query: 812  ILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSI 871
            +L+FGPPGCSKTLMA+AVA+E+ +NF+AVKGPELFSK+VGESEKAV  +F KAR+ APSI
Sbjct: 451  VLLFGPPGCSKTLMAKAVATESRMNFIAVKGPELFSKFVGESEKAVAGVFKKARSAAPSI 510

Query: 872  IFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVN--VTVIAATNRPDKIDP 928
            +FFDEID +A  RG     G +V+DRV++QLL E+DG+  + +  V VIAATNRPD +D 
Sbjct: 511  VFFDEIDAMATKRGSGLESGSNVTDRVLTQLLTEMDGVSTKFDQSVVVIAATNRPDLLDS 570

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDRL+YV  PNE  R+EIF++H+ K+  S+D +I EL+  +EG +GA+I+ +C
Sbjct: 571  ALLRPGRFDRLVYVSLPNEDARKEIFKVHIAKMRFSTDTDIDELSKRTEGYSGAEIAAVC 630

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            RE+A++A+ E   A  +  +H++ A+  V+P    S  +  A F+
Sbjct: 631  RESAMNALREEPPADIVEKRHIEKALETVKPRTPKSLLDFYANFE 675



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 127/215 (59%), Gaps = 20/215 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG+RP +GVLL GPPG  KT +A+  A +S +N   V GPE+ S+  GESE+A+  V
Sbjct: 440 FTRLGVRPPRGVLLFGPPGCSKTLMAKAVATESRMNFIAVKGPELFSKFVGESEKAVAGV 499

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG---GEELSQRMVATLLNLMDGVCRT--DGVLVI 550
           F  A  +AP++VF DE+DA+A  R  G   G  ++ R++  LL  MDGV       V+VI
Sbjct: 500 FKKARSAAPSIVFFDEIDAMATKRGSGLESGSNVTDRVLTQLLTEMDGVSTKFDQSVVVI 559

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNRPD ++ AL RPGR DR + + +              P+   R EI    ++ M  
Sbjct: 560 AATNRPDLLDSALLRPGRFDRLVYVSL--------------PNEDARKEIFKVHIAKMRF 605

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           S  D++++ LS  T G+ GA++AA+C E+A+  LR
Sbjct: 606 S-TDTDIDELSKRTEGYSGAEIAAVCRESAMNALR 639



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 37/202 (18%)

Query: 443 PTKGVLLHGPPGTGKTSL-ARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
           P K  +LHGP G+GKT L + +   ++ ++    + P ++S  +G +E++L    +    
Sbjct: 212 PRKSFILHGPSGSGKTVLTSAIVNQNTSLSFALFSIPSILSGTFGAAERSLRAARNRD-- 269

Query: 502 SAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
               ++ ++ ++ ++       +E+S+R+++++  + +          I +  R      
Sbjct: 270 ----IIILENMEVLS------SDEVSRRLISSIATISEHTTIIATTTDIDSFPR------ 313

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL--SGMEHSLLDSEVEY 619
            LR+ GR+   IE+                PS  +R  IL  +L  SG+++   D++V+ 
Sbjct: 314 ILRQGGRISENIELQ--------------APSATEREMILKQILDDSGIKYD--DTDVKA 357

Query: 620 LSMATHGFVGADLAALCNEAAL 641
            + A  GFVG DL  LC+EA +
Sbjct: 358 AATAATGFVGGDLQRLCSEAII 379



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 34/273 (12%)

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASE-AGLNFLAVKGPELFSKWVGESE 854
            +  E  K I + P    ++ GP G  KT++  A+ ++   L+F     P + S   G +E
Sbjct: 200  QFDEIQKFITSNPRKSFILHGPSGSGKTVLTSAIVNQNTSLSFALFSIPSILSGTFGAAE 259

Query: 855  KAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNV 914
            +++R+  A+ R     II  + ++ L+            SD V  +L+  +  + +   +
Sbjct: 260  RSLRA--ARNR----DIIILENMEVLS------------SDEVSRRLISSIATISEHTTI 301

Query: 915  TVIAATNRPDKIDPALLRPG-RFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIREL 972
                         P +LR G R    + +  P+ T+RE I +  L        D +++  
Sbjct: 302  IATTTDIDSF---PRILRQGGRISENIELQAPSATEREMILKQILDDSGIKYDDTDVKAA 358

Query: 973  ACLSEGCTGADISLICREAAISAIEEN-----LDASRI---TMQHLKTAIRHVQPSEIHS 1024
            A  + G  G D+  +C EA I + +++        SR+   +++H+   I  V+ S+I  
Sbjct: 359  ATAATGFVGGDLQRLCSEAIIDSYDQSSLSLTKALSRVKPASLRHITLEIPTVKWSDIGG 418

Query: 1025 YKELSAKFQRLVHSNAEADESGYQL--RPSKSI 1055
            Y+++  K +  V    E  E+  +L  RP + +
Sbjct: 419  YEDVKQKLKESVTLPLEKPEAFTRLGVRPPRGV 451


>gi|14520611|ref|NP_126086.1| cell division protein CDC48 [Pyrococcus abyssi GE5]
 gi|5457827|emb|CAB49317.1| Cdc48 cell division control protein 48, AAA family [Pyrococcus abyssi
            GE5]
 gi|380741139|tpe|CCE69773.1| TPA: cell division protein CDC48 [Pyrococcus abyssi GE5]
          Length = 795

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 154/311 (49%), Positives = 216/311 (69%), Gaps = 21/311 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++EVP V W+D+GG  +VK +L EAVEWP K+ EAFK
Sbjct: 484  LKVTRRDFYEALKMVEPSALREVLIEVPNVHWDDIGGLEDVKQELREAVEWPLKYPEAFK 543

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G  PP GIL++GPPG  KTL+A+AVA+E+  NF+AV+GPE+ SKWVGESEK +R +F 
Sbjct: 544  AYGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAVRGPEILSKWVGESEKNIREIFR 603

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VIAATNR
Sbjct: 604  KARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRIINQLLTEMDGIQENAGVVVIAATNR 661

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV+++ELA  +EG TGA
Sbjct: 662  PDILDPALLRPGRFDRLILVPAPDEKARFEIFKVHTRGMPLADDVDLKELARRTEGYTGA 721

Query: 983  DISLICREAAISAIEENLDA---------------SRITMQHLKTAIRHVQPS----EIH 1023
            DI+ +CREAA+ A+   L+                +++TM+  + A+R + PS     + 
Sbjct: 722  DIAAVCREAAMIAMRRALEKGIIKPGMKASEIRRLAKVTMKDFEEALRKIGPSVSKETME 781

Query: 1024 SYKELSAKFQR 1034
             Y+++  +F++
Sbjct: 782  YYRKIQEQFKQ 792



 Score =  209 bits (531), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 99/195 (50%), Positives = 135/195 (69%), Gaps = 2/195 (1%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V +ED+GG ++V  ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179 VTYEDIGGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EA   F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R + +   
Sbjct: 239 EANAYFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKRSEVTG-- 296

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V  RV++QLL  +DGL  R  V VI ATNRPD IDPAL RPGRFDR + VG P+   R+
Sbjct: 297 EVEKRVVAQLLALMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDREIEVGVPDRQGRK 356

Query: 952 EIFRIHLRKIPCSSD 966
           EI +IH R +P   D
Sbjct: 357 EILQIHTRGMPIEPD 371



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 131/213 (61%), Gaps = 19/213 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             + G+ P KG+LL+GPPGTGKT LA+  A +S  N   V GPE++S+  GESE+ + E+
Sbjct: 542 FKAYGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAVRGPEILSKWVGESEKNIREI 601

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A Q+AP V+FIDE+DAIAP R      ++ R++  LL  MDG+    GV+VIAATNR
Sbjct: 602 FRKARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRIINQLLTEMDGIQENAGVVVIAATNR 661

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLL 613
           PD ++PAL RPGR DR I                 VP+P +  R EI      GM  +  
Sbjct: 662 PDILDPALLRPGRFDRLI----------------LVPAPDEKARFEIFKVHTRGMPLA-D 704

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           D +++ L+  T G+ GAD+AA+C EAA++ +RR
Sbjct: 705 DVDLKELARRTEGYTGADIAAVCREAAMIAMRR 737



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/217 (44%), Positives = 130/217 (59%), Gaps = 18/217 (8%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P  ++E +       +DI   GGL      ++++I +          LG+ P KGVLL+G
Sbjct: 167 PVKEVEKRMTTGVTYEDI---GGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYG 223

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L EVF  A ++APA++FIDE
Sbjct: 224 PPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDE 283

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNRPD+I+PALRRPGR DR
Sbjct: 284 IDAIAPKRSEVTGEVEKRVVAQLLALMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDR 343

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
           EIE+               VP    R EIL     GM
Sbjct: 344 EIEV--------------GVPDRQGRKEILQIHTRGM 366


>gi|313125585|ref|YP_004035849.1| ATPase AAA [Halogeometricum borinquense DSM 11551]
 gi|448285424|ref|ZP_21476667.1| ATPase AAA [Halogeometricum borinquense DSM 11551]
 gi|312291950|gb|ADQ66410.1| AAA family ATPase, CDC48 subfamily [Halogeometricum borinquense DSM
            11551]
 gi|445576680|gb|ELY31130.1| ATPase AAA [Halogeometricum borinquense DSM 11551]
          Length = 741

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 151/282 (53%), Positives = 206/282 (73%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE A  +V PSAMREV++E+PKV W+DVGG  + K ++ E+VEWP   ++ F+R+G  P
Sbjct: 436  DFEGALTEVEPSAMREVLVELPKVSWDDVGGLEDPKQKVKESVEWPLTSRDKFERMGIEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG +  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPSRGNDM-GNNVSERVVNQLLTELDGLEENGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P E  RE+I RIH +  P + DV++RE+A ++EG  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVLIGQPGEEGREQILRIHTQSSPLAPDVSLREIAEITEGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ DA  I M+H + A+  V+P+   E+  Y E
Sbjct: 675  REAAIEALREDDDAKEIEMRHFRKAMEAVRPTITDELMDYYE 716



 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 108/229 (47%), Positives = 152/229 (66%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E+ R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDESGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 154/236 (65%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P  + R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDESGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 126/216 (58%), Gaps = 20/216 (9%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           +     +G+ P KGVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+
Sbjct: 485 RDKFERMGIEPPKGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGESEKAI 544

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            + F  A Q +P ++F DELD++AP+R  D G  +S+R+V  LL  +DG+     V+VI 
Sbjct: 545 RQTFRKARQVSPTIIFFDELDSLAPSRGNDMGNNVSERVVNQLLTELDGLEENGDVMVIG 604

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL R GR DR + I                P    R +IL       + S
Sbjct: 605 ATNRPDMIDPALIRSGRFDRLVLI--------------GQPGEEGREQILRI---HTQSS 647

Query: 612 LLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            L  +V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 648 PLAPDVSLREIAEITEGYVGSDLESIAREAAIEALR 683


>gi|255076839|ref|XP_002502086.1| predicted protein [Micromonas sp. RCC299]
 gi|226517351|gb|ACO63344.1| predicted protein [Micromonas sp. RCC299]
          Length = 543

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 156/276 (56%), Positives = 202/276 (73%), Gaps = 5/276 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE A+ +VRPSA+REV +EVPKV W+DVGG  EVK  L EAVEW +K+ EA  R+G +P
Sbjct: 268  DFEFAKKRVRPSALREVQIEVPKVSWDDVGGNHEVKQLLKEAVEWTEKYPEAMARLGAKP 327

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPGCSKT++ARAVASE+G NFL+VKGPEL+SKWVG+SEKAVR+LF +A+ +A
Sbjct: 328  PKGVLLYGPPGCSKTMLARAVASESGRNFLSVKGPELYSKWVGDSEKAVRTLFRRAKTSA 387

Query: 869  PSIIFFDEIDGLAAIRG---KESDGVSVSDRVMSQLLVELDGLHQR-VNVTVIAATNRPD 924
            PS+IF DEIDGL   R        GV+V DRV++QLL E+DG+      V VIAATN P 
Sbjct: 388  PSVIFIDEIDGLVQTRSDGGGGDGGVNVHDRVLTQLLTEMDGVDAAGSKVAVIAATNMPH 447

Query: 925  KIDPALLRPGRFDRLLYVG-PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
             IDPALLRPGRFDRLLY+  P +  DR EI R+  +K+P + DV++  L     G TGAD
Sbjct: 448  LIDPALLRPGRFDRLLYIPLPSDPVDRTEILRVTTKKMPLAPDVDLDALGAQLAGYTGAD 507

Query: 984  ISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            I+ +CREA ++A+EE++D + I  +H  T+     P
Sbjct: 508  IAALCREAGMAALEEDIDITHIHARHFATSATRTPP 543



 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/255 (43%), Positives = 154/255 (60%), Gaps = 32/255 (12%)

Query: 413 LGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGG+S+ + A+L+++ +  +     ++ G++P +GVLL GPPGTGK+ LAR  A  +G N
Sbjct: 9   LGGISEFKEALLENVALPLTKPEIFTTFGIKPPRGVLLWGPPGTGKSRLARAAADAAGAN 68

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG-------- 523
           L  V GPE++    GESE AL  VF  A ++ P VV IDE+D+IAPAR+ G         
Sbjct: 69  LLVVRGPELIGPVVGESEAALRGVFKEAVRTRPCVVMIDEIDSIAPARQGGDGVTGGGGK 128

Query: 524 -----EELSQRMVATLLNLMDGVCRTD----GVLVIAATNRPDSIEPALRRPGRLDREIE 574
                + +S R+V TLL++MDGV   +     V+V+A TNRP++I+ ALRRPGR D+EIE
Sbjct: 129 GGGDEDAMSNRVVTTLLSIMDGVSAENLDLHRVVVVATTNRPEAIDRALRRPGRFDKEIE 188

Query: 575 IDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAA 634
           +               VP+PA R EI    L  + H L D++V+ LS   HGFVGAD+ A
Sbjct: 189 V--------------GVPTPASRREIFAIKLRDVAHELTDADVDELSKGCHGFVGADVGA 234

Query: 635 LCNEAALVCLRRYSK 649
           L N+AA   LRR  K
Sbjct: 235 LVNQAAYQALRRRVK 249



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 151/285 (52%), Gaps = 33/285 (11%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V+++D+GG  E K  L+E V  P    E F   G +PP G+L++GPPG  K+ +ARA A 
Sbjct: 4    VRFQDLGGISEFKEALLENVALPLTKPEIFTTFGIKPPRGVLLWGPPGTGKSRLARAAAD 63

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR------- 884
             AG N L V+GPEL    VGESE A+R +F +A    P ++  DEID +A  R       
Sbjct: 64   AAGANLLVVRGPELIGPVVGESEAALRGVFKEAVRTRPCVVMIDEIDSIAPARQGGDGVT 123

Query: 885  ----GKESDGVSVSDRVMSQLLVELDG-------LHQRVNVTVIAATNRPDKIDPALLRP 933
                    D  ++S+RV++ LL  +DG       LH+   V V+A TNRP+ ID AL RP
Sbjct: 124  GGGGKGGGDEDAMSNRVVTTLLSIMDGVSAENLDLHR---VVVVATTNRPEAIDRALRRP 180

Query: 934  GRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAA 992
            GRFD+ + VG P    R EIF I LR +    +D ++ EL+    G  GAD+  +  +AA
Sbjct: 181  GRFDKEIEVGVPTPASRREIFAIKLRDVAHELTDADVDELSKGCHGFVGADVGALVNQAA 240

Query: 993  ISAIEENL--------DASR---ITMQHLKTAIRHVQPSEIHSYK 1026
              A+   +        DA +   +T    + A + V+PS +   +
Sbjct: 241  YQALRRRVKEKEAWWSDACKTRTVTRADFEFAKKRVRPSALREVQ 285



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/268 (38%), Positives = 139/268 (51%), Gaps = 29/268 (10%)

Query: 385 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
           K +R   L   QIE   V          +GG  +   +LK+ +  +      ++ LG +P
Sbjct: 274 KRVRPSALREVQIEVPKVS------WDDVGGNHEVKQLLKEAVEWTEKYPEAMARLGAKP 327

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
            KGVLL+GPPG  KT LAR  A +SG N  +V GPE+ S+  G+SE+A+  +F  A  SA
Sbjct: 328 PKGVLLYGPPGCSKTMLARAVASESGRNFLSVKGPELYSKWVGDSEKAVRTLFRRAKTSA 387

Query: 504 PAVVFIDELDAIAPARKDGGE-----ELSQRMVATLLNLMDGV-CRTDGVLVIAATNRPD 557
           P+V+FIDE+D +   R DGG       +  R++  LL  MDGV      V VIAATN P 
Sbjct: 388 PSVIFIDEIDGLVQTRSDGGGGDGGVNVHDRVLTQLLTEMDGVDAAGSKVAVIAATNMPH 447

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPS-PAQRLEILHALLSGMEHSLLDSE 616
            I+PAL RPGR DR + I +              PS P  R EIL      M  +  D +
Sbjct: 448 LIDPALLRPGRFDRLLYIPL--------------PSDPVDRTEILRVTTKKMPLA-PDVD 492

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCL 644
           ++ L     G+ GAD+AALC EA +  L
Sbjct: 493 LDALGAQLAGYTGADIAALCREAGMAAL 520


>gi|410914509|ref|XP_003970730.1| PREDICTED: spermatogenesis-associated protein 5-like [Takifugu
            rubripes]
          Length = 988

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/349 (46%), Positives = 232/349 (66%), Gaps = 6/349 (1%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            A+ + + D + A   V+PSAMREV ++VP+V+W DV G  EVK +L +AVEWP +H EAF
Sbjct: 588  AVSITVQDLQWAMSAVKPSAMREVAVDVPQVRWSDVAGMEEVKLKLKQAVEWPLRHPEAF 647

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G  PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL SK+VGESE+AVR +F
Sbjct: 648  TRMGILPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELLSKYVGESERAVREVF 707

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KARA APSI+FFDEID LA+ RG  S    V DRV++QLL E+DG+ Q  +VTV+AATN
Sbjct: 708  RKARAVAPSIVFFDEIDALASERGSSSGSGGVGDRVLAQLLTEMDGVEQLRDVTVLAATN 767

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID AL+RPGR DR++YV  P+   R +IF +  R  P   DV++  L   ++  +G
Sbjct: 768  RPDMIDKALMRPGRLDRIIYVPLPDPPTRRQIFSLQFRHTPVDQDVSLDHLVARTDKYSG 827

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP----SEIHSYKELSAKFQRLVH 1037
            A+I+ +CREAA+ A+++++ A R+   H + A+  V+P    S + SY  +S + QR   
Sbjct: 828  AEITAVCREAALLALQDDIKAQRVLAGHFEGALSTVKPRIPDSLVQSY--VSYQQQRSGG 885

Query: 1038 SNAEADESGYQLRPSKSIGSNMWTLIKSISLFLCRFPAGLSQSESGSSG 1086
                 D S  Q     S+   +  +   +   + RFP+ L  + SG  G
Sbjct: 886  PFWNPDGSWGQGGGGGSLCRFITPVENRLIAVIVRFPSALPTAGSGERG 934



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/240 (44%), Positives = 151/240 (62%), Gaps = 18/240 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGLS +  ++++ I +        S+ G+ P +GVLL+GPPGTGKT + R  A++ G
Sbjct: 347 SMIGGLSSQLDVIRETIELPLKHPELFSNYGIPPPRGVLLYGPPGTGKTMIGRAIANEVG 406

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            ++  +NGPE++S+ YGE+E  L ++F  ASQ  PA+VFIDELDA+ P R+    E+ +R
Sbjct: 407 AHMTVINGPEIMSKFYGETEARLRQIFAEASQRQPAIVFIDELDALCPKREGAQNEVEKR 466

Query: 530 MVATLLNLMDGV---CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           +VA+LL LMDG+     +  VLV+ ATNRP +++PALRRPGR D+E+E+           
Sbjct: 467 VVASLLTLMDGIGSEGHSGQVLVLGATNRPHALDPALRRPGRFDKELEV----------- 515

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
               VPS A+R +IL   L          E+  L+ A HG+VGADLAA+C EA L  LRR
Sbjct: 516 ---GVPSAAERADILQKQLRLAPCGASREELTQLADAAHGYVGADLAAVCKEAGLHALRR 572



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/269 (37%), Positives = 153/269 (56%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV +  +GG       + E +E P KH E F   G  PP G+L++GPPG  KT++ RA+A
Sbjct: 343  KVTYSMIGGLSSQLDVIRETIELPLKHPELFSNYGIPPPRGVLLYGPPGTGKTMIGRAIA 402

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G +   + GPE+ SK+ GE+E  +R +FA+A    P+I+F DE+D L   R  E   
Sbjct: 403  NEVGAHMTVINGPEIMSKFYGETEARLRQIFAEASQRQPAIVFIDELDALCPKR--EGAQ 460

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   V V+ ATNRP  +DPAL RPGRFD+ L VG P+ 
Sbjct: 461  NEVEKRVVASLLTLMDGIGSEGHSGQVLVLGATNRPHALDPALRRPGRFDKELEVGVPSA 520

Query: 948  TDREEIFRIHLRKIPC-SSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR-- 1004
             +R +I +  LR  PC +S   + +LA  + G  GAD++ +C+EA + A+   +  S+  
Sbjct: 521  AERADILQKQLRLAPCGASREELTQLADAAHGYVGADLAAVCKEAGLHALRRAMGGSQQP 580

Query: 1005 ----------ITMQHLKTAIRHVQPSEIH 1023
                      IT+Q L+ A+  V+PS + 
Sbjct: 581  SDKQLKGAVSITVQDLQWAMSAVKPSAMR 609



 Score =  152 bits (385), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/220 (40%), Positives = 129/220 (58%), Gaps = 21/220 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +G+ P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++S+  GESE+A+ EV
Sbjct: 647 FTRMGILPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELLSKYVGESERAVREV 706

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A   AP++VF DE+DA+A  R    G   +  R++A LL  MDGV +   V V+AAT
Sbjct: 707 FRKARAVAPSIVFFDEIDALASERGSSSGSGGVGDRVLAQLLTEMDGVEQLRDVTVLAAT 766

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+ AL RPGRLDR I + +              P P  R +I         H+ +
Sbjct: 767 NRPDMIDKALMRPGRLDRIIYVPL--------------PDPPTRRQIFSLQF---RHTPV 809

Query: 614 DSEV--EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           D +V  ++L   T  + GA++ A+C EAAL+ L+   K Q
Sbjct: 810 DQDVSLDHLVARTDKYSGAEITAVCREAALLALQDDIKAQ 849


>gi|327274098|ref|XP_003221815.1| PREDICTED: spermatogenesis-associated protein 5-like [Anolis
            carolinensis]
          Length = 876

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 151/286 (52%), Positives = 209/286 (73%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   VRPSAMREV ++VPKV W D+GG   VK +L +AVEWP KH E+F ++G +P
Sbjct: 584  DFLRAVNDVRPSAMREVAIDVPKVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQP 643

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPGCSKT++A+A+A+E+GLNFLAVKGPEL +K+VGESE+AVR +F KARA +
Sbjct: 644  PKGVLLYGPPGCSKTMIAKALANESGLNFLAVKGPELMNKYVGESERAVREIFRKARAVS 703

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSI+FFDEID LA  RG  S   +V DRV++QLL E+DG+ Q  +VT++AATNRPD ID 
Sbjct: 704  PSILFFDEIDALAVERGSSSSSGNVGDRVLAQLLTEMDGIEQLKDVTILAATNRPDMIDK 763

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+RPGR DR++YV  P+   R+EI +I  R +P S +V + EL   ++  +GA+I  +C
Sbjct: 764  ALMRPGRIDRIIYVPLPDAATRKEILKIQFRTMPISDEVYLDELVQRTQKYSGAEIIAVC 823

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            REAA+ A++E++ A  I  QH + A+  V P    S ++    +Q+
Sbjct: 824  REAALLALQEDIQAKCIMGQHFEQALAIVTPRIPDSLQKFYDDYQQ 869



 Score =  213 bits (541), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 174/286 (60%), Gaps = 35/286 (12%)

Query: 366 FVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKD 425
           + I+  TK+    P + V++               N++  V  D   +GGLS +   +++
Sbjct: 306 YFISSRTKIRFTEPRSKVTEEC-------------NLEPKVTYD--SIGGLSDQLKSIRE 350

Query: 426 II-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQN 484
           II +           G+ P +GVLL+GPPGTGKT +AR  A++ G ++ T+NGPE++S+ 
Sbjct: 351 IIELPLKQPDLFRRYGIPPPRGVLLYGPPGTGKTLIARAVANEVGAHVTTINGPEIISKF 410

Query: 485 YGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRT 544
           YGESE  L ++F  AS   P+++FIDE+DA+ P R+    E  +R+VA+LL LMDG+  +
Sbjct: 411 YGESEARLRQIFAEASLRRPSIIFIDEIDALCPKREGAQSEFEKRIVASLLTLMDGIG-S 469

Query: 545 DG----VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI 600
           +G    +LV+ ATNRP +++PALRRPGR D+EIEI               VP+   RL+I
Sbjct: 470 EGNEGQLLVLGATNRPHALDPALRRPGRFDKEIEI--------------GVPNAQNRLDI 515

Query: 601 LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            + LL+ + HSL ++E+  L+ +THG+VGADLAALC EA L  LRR
Sbjct: 516 FNKLLNKVPHSLTETELVQLAESTHGYVGADLAALCKEAGLYALRR 561



 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/290 (38%), Positives = 168/290 (57%), Gaps = 16/290 (5%)

Query: 724  HNGVSDSSGG----MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEV----PKVKWE 775
            H  VSD S G    +   ++G  L  +   F  +R K+R +  R  + E     PKV ++
Sbjct: 277  HCEVSDKSFGSEEVLQNDKRGAPLTSQTFYFISSRTKIRFTEPRSKVTEECNLEPKVTYD 336

Query: 776  DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGL 835
             +GG  +    + E +E P K  + F+R G  PP G+L++GPPG  KTL+ARAVA+E G 
Sbjct: 337  SIGGLSDQLKSIREIIELPLKQPDLFRRYGIPPPRGVLLYGPPGTGKTLIARAVANEVGA 396

Query: 836  NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESDGVSVS 894
            +   + GPE+ SK+ GESE  +R +FA+A    PSIIF DEID L   R G +S+     
Sbjct: 397  HVTTINGPEIISKFYGESEARLRQIFAEASLRRPSIIFIDEIDALCPKREGAQSE---FE 453

Query: 895  DRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             R+++ LL  +DG+    N   + V+ ATNRP  +DPAL RPGRFD+ + +G PN  +R 
Sbjct: 454  KRIVASLLTLMDGIGSEGNEGQLLVLGATNRPHALDPALRRPGRFDKEIEIGVPNAQNRL 513

Query: 952  EIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            +IF   L K+P S ++  + +LA  + G  GAD++ +C+EA + A+   L
Sbjct: 514  DIFNKLLNKVPHSLTETELVQLAESTHGYVGADLAALCKEAGLYALRRVL 563



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 17/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   V GPE++++  GESE+A+ E
Sbjct: 635 SFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAVKGPELMNKYVGESERAVRE 694

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   +P+++F DE+DA+A  R        +  R++A LL  MDG+ +   V ++AA
Sbjct: 695 IFRKARAVSPSILFFDEIDALAVERGSSSSSGNVGDRVLAQLLTEMDGIEQLKDVTILAA 754

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR I + +              P  A R EIL      M  S 
Sbjct: 755 TNRPDMIDKALMRPGRIDRIIYVPL--------------PDAATRKEILKIQFRTMPIS- 799

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            +  ++ L   T  + GA++ A+C EAAL+ L+
Sbjct: 800 DEVYLDELVQRTQKYSGAEIIAVCREAALLALQ 832


>gi|432961516|ref|XP_004086612.1| PREDICTED: spermatogenesis-associated protein 5-like [Oryzias
            latipes]
          Length = 851

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 153/322 (47%), Positives = 217/322 (67%), Gaps = 16/322 (4%)

Query: 712  LRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPK 771
            LRG++ E  D     V+                +   D + A   ++PSAMREV  + PK
Sbjct: 537  LRGSLHEAKDQLVGKVT----------------ISFQDLQWAMAVIKPSAMREVAFDFPK 580

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V W D+GG  EVK +L +AVEWP +H EAF R+G +PP G+L++GPPGCSKT++A+A+A+
Sbjct: 581  VCWSDIGGMAEVKLKLQQAVEWPLRHPEAFIRMGIQPPKGVLLYGPPGCSKTMVAKALAN 640

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+GLNFL +KGPEL SK+VGESEKAVR +F KAR  +PSI+FFDEID LA+ RG  +   
Sbjct: 641  ESGLNFLTIKGPELLSKYVGESEKAVREVFRKARTVSPSIVFFDEIDALASERGSATGLK 700

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V DRV++QLL E+DG+ Q  +VTV+AATNRPD ID AL+RPGR DR++YV  P+   R+
Sbjct: 701  GVGDRVLAQLLTEIDGIEQLRDVTVLAATNRPDMIDKALMRPGRLDRIIYVPLPDALTRQ 760

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EIF +  R IP +++V++ +L   +   +GA+I  +CREAA+ A++E++ A  I  +H +
Sbjct: 761  EIFSLQFRSIPVANNVSLDDLVAQTNKYSGAEILAVCREAALLALQEDIAAQHIESKHFE 820

Query: 1012 TAIRHVQPSEIHSYKELSAKFQ 1033
            +A++ V P    S  +L   +Q
Sbjct: 821  SALKIVIPRVPDSLIQLYINYQ 842



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 126/209 (60%), Gaps = 17/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N  T+ GPE++S+  GESE+A+ EVF  
Sbjct: 613 MGIQPPKGVLLYGPPGCSKTMVAKALANESGLNFLTIKGPELLSKYVGESEKAVREVFRK 672

Query: 499 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   +P++VF DE+DA+A  R    G + +  R++A LL  +DG+ +   V V+AATNRP
Sbjct: 673 ARTVSPSIVFFDEIDALASERGSATGLKGVGDRVLAQLLTEIDGIEQLRDVTVLAATNRP 732

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGRLDR I + +              P    R EI       +  +  +  
Sbjct: 733 DMIDKALMRPGRLDRIIYVPL--------------PDALTRQEIFSLQFRSIPVA-NNVS 777

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           ++ L   T+ + GA++ A+C EAAL+ L+
Sbjct: 778 LDDLVAQTNKYSGAEILAVCREAALLALQ 806



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 105/169 (62%), Gaps = 17/169 (10%)

Query: 481 VSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDG 540
           + + YGE+E  L ++F  AS   PA++FIDELDA+ P R+    E+ +R+VATLL LMDG
Sbjct: 381 IEKFYGETEARLRQIFTEASLRQPAIIFIDELDALCPKREGAQNEVEKRVVATLLTLMDG 440

Query: 541 V---CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQR 597
           +     +  ++V+ ATNRP +++PALRRPGR D+E+E+               VP+ A+R
Sbjct: 441 IGSEGHSGRLVVLGATNRPQALDPALRRPGRFDKELEV--------------GVPTSAER 486

Query: 598 LEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            +IL   LS +  S    E+  L+   HG+VGADLAA+C EA L  +RR
Sbjct: 487 ADILLKQLSLVPCSATTEELTQLADTAHGYVGADLAAVCKEAGLRAVRR 535



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 132/285 (46%), Gaps = 46/285 (16%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            K+ +  +GG       + E +E P KH E F   G      +    P         R + 
Sbjct: 331  KITYNKIGGLSSQLDTIKETIELPLKHPELFSNYGVNGTVTLKRLAP--------IRKI- 381

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
                             K+ GE+E  +R +F +A    P+IIF DE+D L   R  E   
Sbjct: 382  ----------------EKFYGETEARLRQIFTEASLRQPAIIFIDELDALCPKR--EGAQ 423

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+    +   + V+ ATNRP  +DPAL RPGRFD+ L VG P  
Sbjct: 424  NEVEKRVVATLLTLMDGIGSEGHSGRLVVLGATNRPQALDPALRRPGRFDKELEVGVPTS 483

Query: 948  TDREEIFRIHLRKIPCSSDV-NIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             +R +I    L  +PCS+    + +LA  + G  GAD++ +C+EA + A+   L  S   
Sbjct: 484  AERADILLKQLSLVPCSATTEELTQLADTAHGYVGADLAAVCKEAGLRAVRRGLRGSLHE 543

Query: 1004 ---------RITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSN 1039
                      I+ Q L+ A+  ++PS   + +E++  F ++  S+
Sbjct: 544  AKDQLVGKVTISFQDLQWAMAVIKPS---AMREVAFDFPKVCWSD 585


>gi|257387828|ref|YP_003177601.1| ATPase AAA [Halomicrobium mukohataei DSM 12286]
 gi|257170135|gb|ACV47894.1| AAA family ATPase, CDC48 subfamily [Halomicrobium mukohataei DSM
            12286]
          Length = 740

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 152/282 (53%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP    E F+R+G  P
Sbjct: 436  DFRGALNEVSPSAMREVLVELPKISWDDVGGLDDAKEQVQESVEWPMNSPEKFERMGVSP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +   V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPGRGGET-GSNVSERVVNQLLTELDGLEEMEEVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG P    RE+I +IH    P S DV++RELA +++G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMVGEPGIEGREQILKIHTDDTPLSPDVSLRELAEMTDGYVGSDLESIG 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ DA  + M+H + A+ +V+P+   +I  Y E
Sbjct: 675  REAAIEALREDDDAEMVEMRHFRQAMENVRPTITDDIRDYYE 716



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/229 (48%), Positives = 148/229 (64%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLSSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   APSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEEAPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV +  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVALSNLATETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 113/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLSSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ AP+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEEAPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVALSNLATETHGFVGADIESLTKEAAMKALRRY 411



 Score =  147 bits (371), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 123/213 (57%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FERMGVSPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q AP V+F DELD++AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVAPTVIFFDELDSLAPGR--GGETGSNVSERVVNQLLTELDGLEEMEEVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + +                P    R +IL         S 
Sbjct: 606 TNRPDMIDPALIRSGRFDRLVMV--------------GEPGIEGREQILKIHTDDTPLS- 650

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D  +  L+  T G+VG+DL ++  EAA+  LR
Sbjct: 651 PDVSLRELAEMTDGYVGSDLESIGREAAIEALR 683


>gi|322372274|ref|ZP_08046815.1| cell division control protein 48 [Haladaptatus paucihalophilus DX253]
 gi|320548283|gb|EFW89956.1| cell division control protein 48 [Haladaptatus paucihalophilus DX253]
          Length = 740

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 209/289 (72%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PKV W+DVGG  + K+Q+ E+VEWP    E F+R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKVSWDDVGGLEDAKSQVKESVEWPLSSPEKFERMGIEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL  + +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPGRGQEV-GSNVSERVVNQLLTELDGLEDKGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P+E  RE+I +IH    P + DV++RELA +++G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMIGQPDEEGREQILKIHTEDSPLAPDVSLRELAEMTDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSE----IHSYKELSAKFQ 1033
            REAAI A+ E+ DA  + M+H + A+  V+ +     +  Y ++  +F+
Sbjct: 675  REAAIEALREDDDAEEVEMRHFRAAMESVRATVTEDLLDYYADMEQEFK 723



 Score =  216 bits (550), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAAEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R 
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEEGRT 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DVN+  L+  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVNLPGLSNDTHGFVGADIESLTKEAAMKALRRYL 412



 Score =  213 bits (541), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAAEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  LS  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEEGRTEILQIHTRGMPLS-DDVNLPGLSNDTHGFVGADIESLTKEAAMKALRRY 411



 Score =  150 bits (378), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 138/242 (57%), Gaps = 31/242 (12%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAH 466
           +GGL    + +K+     SV+  LSS      +G+ P  GVLL+GPPGTGKT +A+  A+
Sbjct: 464 VGGLEDAKSQVKE-----SVEWPLSSPEKFERMGIEPPSGVLLYGPPGTGKTLMAKAVAN 518

Query: 467 DSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE 525
           ++  N  +V GP+++S+  GESE+A+ + F  A Q +P V+F DELD++AP R ++ G  
Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTVIFFDELDSLAPGRGQEVGSN 578

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +S+R+V  LL  +DG+     V+VI ATNRPD I+PAL R GR DR + I          
Sbjct: 579 VSERVVNQLLTELDGLEDKGDVMVIGATNRPDMIDPALIRSGRFDRLVMI---------- 628

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVC 643
                 P    R +IL       E S L  +V    +A  T G+VG+DL ++  EAA+  
Sbjct: 629 ----GQPDEEGREQILKI---HTEDSPLAPDVSLRELAEMTDGYVGSDLESIAREAAIEA 681

Query: 644 LR 645
           LR
Sbjct: 682 LR 683


>gi|320165862|gb|EFW42761.1| ATPase [Capsaspora owczarzaki ATCC 30864]
          Length = 838

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 153/287 (53%), Positives = 204/287 (71%), Gaps = 1/287 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D   A  +VRPSAMREV +E+PKV+W D+GG  +VK +L+EAV+WP +H E F R+   P
Sbjct: 545  DMRYALGQVRPSAMREVAVEIPKVRWSDIGGMHDVKQRLVEAVQWPLQHPEMFARLNLSP 604

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPGCSKTLMA+A+A+E+GLNF+A+KGPELFSKWVGESE+AVR  F KARA A
Sbjct: 605  PRGILLYGPPGCSKTLMAKALATESGLNFIAIKGPELFSKWVGESERAVRETFRKARAAA 664

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P ++FFDEID LA  RG +     V+DRV+SQLL ELDG+    NVTV+AATNRP+ ID 
Sbjct: 665  PCVVFFDEIDALAVARGGDDGAGGVNDRVLSQLLSELDGIEVLRNVTVLAATNRPELIDS 724

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD-VNIRELACLSEGCTGADISLI 987
            ALLRPGR DR++YVGPP+   R EI    L ++P   D   +  L    +GC+GA+++  
Sbjct: 725  ALLRPGRIDRIMYVGPPDAAARLEILSNALSRMPHQLDGAAVNRLVSQLDGCSGAEVAAA 784

Query: 988  CREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            C+EA + A+EE+LDA+ I  +H   A++ V      +  +  A +Q+
Sbjct: 785  CKEAGLFALEESLDAATIEERHFNAAVQKVPKRITPAMLKFYADYQQ 831



 Score =  190 bits (482), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 99/253 (39%), Positives = 148/253 (58%), Gaps = 31/253 (12%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL  + A +++ I +           G+    G LL+GPPGTGKT +AR  A +SG
Sbjct: 278 ADVGGLQSQLASIRETIELPLRHPWIFEQAGMPAPHGALLYGPPGTGKTLIARAAASESG 337

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
            ++  VNGPE+VS+ +GE+E  L  +F  A + AP ++FIDE+DA+ P R D   E  +R
Sbjct: 338 CHVICVNGPELVSKYFGETETRLRNLFAEAHRHAPCLIFIDEIDALCPRRDDATNETERR 397

Query: 530 MVATLLNLMDGV----------------CRTDGVLVIAATNRPDSIEPALRRPGRLDREI 573
           +V TLL LMDG+                 ++  ++V+ ATNRP++++PALRRPGR DRE+
Sbjct: 398 VVGTLLTLMDGLHSGASGKKPTSAATGPVQSKHIMVVGATNRPNALDPALRRPGRFDREV 457

Query: 574 EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
           EI               +P+   R+ IL A L  M H+L + +V  ++ + HG+VGADLA
Sbjct: 458 EI--------------GIPTSTDRISILQACLRHMAHTLSEEDVASIAASAHGYVGADLA 503

Query: 634 ALCNEAALVCLRR 646
           A+C EA L  ++R
Sbjct: 504 AVCREAGLCAVQR 516



 Score =  187 bits (474), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 144/246 (58%), Gaps = 19/246 (7%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V + DVGG +     + E +E P +H   F++ G   P G L++GPPG  KTL+ARA AS
Sbjct: 275  VTYADVGGLQSQLASIRETIELPLRHPWIFEQAGMPAPHGALLYGPPGTGKTLIARAAAS 334

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+G + + V GPEL SK+ GE+E  +R+LFA+A  +AP +IF DEID L   R   ++  
Sbjct: 335  ESGCHVICVNGPELVSKYFGETETRLRNLFAEAHRHAPCLIFIDEIDALCPRRDDATN-- 392

Query: 892  SVSDRVMSQLLVELDGLH----------------QRVNVTVIAATNRPDKIDPALLRPGR 935
                RV+  LL  +DGLH                Q  ++ V+ ATNRP+ +DPAL RPGR
Sbjct: 393  ETERRVVGTLLTLMDGLHSGASGKKPTSAATGPVQSKHIMVVGATNRPNALDPALRRPGR 452

Query: 936  FDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAIS 994
            FDR + +G P  TDR  I +  LR +  + S+ ++  +A  + G  GAD++ +CREA + 
Sbjct: 453  FDREVEIGIPTSTDRISILQACLRHMAHTLSEEDVASIAASAHGYVGADLAAVCREAGLC 512

Query: 995  AIEENL 1000
            A++  L
Sbjct: 513  AVQRRL 518



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 120/211 (56%), Gaps = 16/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + L L P +G+LL+GPPG  KT +A+  A +SG+N   + GPE+ S+  GESE+A+ E 
Sbjct: 597 FARLNLSPPRGILLYGPPGCSKTLMAKALATESGLNFIAIKGPELFSKWVGESERAVRET 656

Query: 496 FDSASQSAPAVVFIDELDAIA--PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A  +AP VVF DE+DA+A      DG   ++ R+++ LL+ +DG+     V V+AAT
Sbjct: 657 FRKARAAAPCVVFFDEIDALAVARGGDDGAGGVNDRVLSQLLSELDGIEVLRNVTVLAAT 716

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRP+ I+ AL RPGR+DR + +                P  A RLEIL   LS M H L 
Sbjct: 717 NRPELIDSALLRPGRIDRIMYV--------------GPPDAAARLEILSNALSRMPHQLD 762

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            + V  L     G  GA++AA C EA L  L
Sbjct: 763 GAAVNRLVSQLDGCSGAEVAAACKEAGLFAL 793


>gi|448298419|ref|ZP_21488448.1| ATPase AAA [Natronorubrum tibetense GA33]
 gi|445591615|gb|ELY45816.1| ATPase AAA [Natronorubrum tibetense GA33]
          Length = 743

 Score =  317 bits (812), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 209/289 (72%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  + E F+R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLHDAKEQVQESVEWPLNNPERFERLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMENVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDVDGRERILDIHTQNTPLAADVTLREIAEITDGYVGSDLESIS 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ ++ +A  + M+H + A+ +V+P+     +  Y+++  +FQ
Sbjct: 675  REAAIEALRDDHEADIVEMRHFRQAMENVRPTITDDILEYYEQIEEEFQ 723



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 162/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV +  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVKLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  Q  + A+  V+PS
Sbjct: 424  PSLIDRMIVKRQDFRGALNEVEPS 447



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 154/236 (65%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D ++ +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVKLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 34/220 (15%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FERLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEEMENVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEI---DMSFLFSLL----KNSPAAVPSPAQRLEILHALL 605
           TNRPD I+PAL R GR DR + I   D+     +L    +N+P A               
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMIGQPDVDGRERILDIHTQNTPLAA-------------- 651

Query: 606 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                   D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 652 --------DVTLREIAEITDGYVGSDLESISREAAIEALR 683


>gi|18978254|ref|NP_579611.1| cell division protein CDC48 [Pyrococcus furiosus DSM 3638]
 gi|18894073|gb|AAL82006.1| cell division control protein 48, aaa family [Pyrococcus furiosus DSM
            3638]
          Length = 796

 Score =  317 bits (812), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 156/311 (50%), Positives = 217/311 (69%), Gaps = 21/311 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++E+P V W+D+GG  EVK QL EAVEWP K+ EAF+
Sbjct: 485  LKVTRRDFYEALKMVEPSALREVLIEIPNVHWDDIGGLEEVKQQLREAVEWPLKYPEAFR 544

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A++GPE+ SKWVGESEK +R +F 
Sbjct: 545  AFGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSKWVGESEKRIREIFR 604

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+IIF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VI ATNR
Sbjct: 605  KARQAAPAIIFIDEIDAIAPTRG--TDVNRVTDRIINQLLTEMDGIVENSGVVVIGATNR 662

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV+++ELA  +EG TGA
Sbjct: 663  PDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRGMPLADDVDLKELARRTEGYTGA 722

Query: 983  DISLICREAAISA---------IEENLDA------SRITMQHLKTAIRHVQPS----EIH 1023
            DI+ +CREAA++A         I+E + A      +++TM+  + A++ + PS     + 
Sbjct: 723  DIAAVCREAALNAMRRALEQGIIKEGMKADEIRKVAKVTMKDFEEALKKIGPSVSKETME 782

Query: 1024 SYKELSAKFQR 1034
             Y ++  KF++
Sbjct: 783  YYLKVQEKFKQ 793



 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 102/212 (48%), Positives = 143/212 (67%), Gaps = 2/212 (0%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V +ED+GG ++V  ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 180 VTYEDIGGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 239

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EA   F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E  G 
Sbjct: 240 EANAYFIAINGPEIMSKYYGESEERLREVFREAEENAPAIIFIDEIDAIAPKR-EEVTG- 297

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V  RV++QLL  +DGL  R  V VI ATNRPD IDPAL RPGRFDR + +G P++  R+
Sbjct: 298 EVEKRVVAQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDREIEIGIPDKQGRK 357

Query: 952 EIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
           EI +IH R +P   D    ++  + E   G +
Sbjct: 358 EILQIHTRGMPIEPDFRKDDVLKILEELRGEE 389



 Score =  186 bits (472), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 19/213 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             + G+ P KG+LL+GPPGTGKT LA+  A +S  N   + GPEV+S+  GESE+ + E+
Sbjct: 543 FRAFGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSKWVGESEKRIREI 602

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A Q+APA++FIDE+DAIAP R      ++ R++  LL  MDG+    GV+VI ATNR
Sbjct: 603 FRKARQAAPAIIFIDEIDAIAPTRGTDVNRVTDRIINQLLTEMDGIVENSGVVVIGATNR 662

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLL 613
           PD I+PAL RPGR DR I                 VP+P +  RLEI      GM  +  
Sbjct: 663 PDIIDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRGMPLA-D 705

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           D +++ L+  T G+ GAD+AA+C EAAL  +RR
Sbjct: 706 DVDLKELARRTEGYTGADIAAVCREAALNAMRR 738



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 96/217 (44%), Positives = 131/217 (60%), Gaps = 18/217 (8%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P  ++E +       +DI   GGL      ++++I +          LG+ P KGVLL+G
Sbjct: 168 PVKEVEKRITTGVTYEDI---GGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYG 224

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L EVF  A ++APA++FIDE
Sbjct: 225 PPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREVFREAEENAPAIIFIDE 284

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNRPD+I+PALRRPGR DR
Sbjct: 285 IDAIAPKREEVTGEVEKRVVAQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDR 344

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
           EIEI               +P    R EIL     GM
Sbjct: 345 EIEI--------------GIPDKQGRKEILQIHTRGM 367


>gi|14590568|ref|NP_142636.1| cell division control [Pyrococcus horikoshii OT3]
 gi|3257095|dbj|BAA29778.1| 840aa long hypothetical cell division control protein (transitional
            endoplasmic reticulum ATPase) [Pyrococcus horikoshii OT3]
          Length = 840

 Score =  317 bits (812), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 156/307 (50%), Positives = 213/307 (69%), Gaps = 17/307 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++EVP V W+D+GG  EVK +L EAVEWP K+ +AFK
Sbjct: 515  LKVTKRDFYEALKMVEPSALREVLIEVPNVHWDDIGGLEEVKQELREAVEWPLKYPKAFK 574

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G  PP G+L++GPPG  KTL+A+AVA+E+  NF+AV+GPE+ SKWVGESEK +R +F 
Sbjct: 575  KLGITPPKGVLLYGPPGTGKTLLAKAVATESEANFIAVRGPEVLSKWVGESEKRIREIFR 634

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+IIF DEID +A  RG  S+G  V+DR+++QLL E+DGL +   V VIAATNR
Sbjct: 635  KARQAAPAIIFIDEIDAIAPARGT-SEGEKVTDRIINQLLTEMDGLVENSGVVVIAATNR 693

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV++RELA  +EG TGA
Sbjct: 694  PDILDPALLRPGRFDRLILVPAPDEEARFEIFKVHTRSMPLADDVDLRELARRTEGYTGA 753

Query: 983  DISLICREAAISAIEE----------------NLDASRITMQHLKTAIRHVQPSEIHSYK 1026
            DI+ +CREAA++A+                   L+   +T +  + A++ V+PS      
Sbjct: 754  DIAAVCREAALNALRRVVKSVPKEKLEEESEEFLNKLVVTRKDFEEALKKVKPSVSKYMM 813

Query: 1027 ELSAKFQ 1033
            E   +F+
Sbjct: 814  EYYRQFE 820



 Score =  216 bits (549), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 107/212 (50%), Positives = 146/212 (68%), Gaps = 2/212 (0%)

Query: 755 MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
           ++V P A+     ++P+V +ED+GG +E   ++ E VE P KH E F+R+G  PP G+L+
Sbjct: 192 VEVLPQAVEVREEKIPEVTYEDIGGLKEAIQKIREMVELPLKHPELFERLGIEPPKGVLL 251

Query: 815 FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
           +GPPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF 
Sbjct: 252 YGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIFI 311

Query: 875 DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
           DEID +A  R +E  G  V  RV+SQLL  +DGL  R  V VI ATNRPD +DPAL RPG
Sbjct: 312 DEIDAIAPKR-EEVVG-EVEKRVVSQLLTLMDGLKGRGKVIVIGATNRPDALDPALRRPG 369

Query: 935 RFDRLLYVGPPNETDREEIFRIHLRKIPCSSD 966
           RFDR + VG P++  R+EI +IH R +P   D
Sbjct: 370 RFDREIEVGVPDKQGRKEILQIHTRGMPIEPD 401



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/303 (36%), Positives = 162/303 (53%), Gaps = 50/303 (16%)

Query: 391 TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
            LP A ++  + +     +DI   GGL +    +++++ +          LG+ P KGVL
Sbjct: 194 VLPQAVEVREEKIPEVTYEDI---GGLKEAIQKIREMVELPLKHPELFERLGIEPPKGVL 250

Query: 449 LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
           L+GPPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L E+F  A ++APA++F
Sbjct: 251 LYGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIF 310

Query: 509 IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
           IDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VI ATNRPD+++PALRRPGR
Sbjct: 311 IDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKGRGKVIVIGATNRPDALDPALRRPGR 370

Query: 569 LDR---------------------------------------EIEIDMSFLFSLLKNSPA 589
            DR                                       ++E D  F    ++    
Sbjct: 371 FDREIEVGVPDKQGRKEILQIHTRGMPIEPDFEKDAVIKVLKDLEKDERFEKEKIEKIIE 430

Query: 590 AVPSPAQRLEILHALLSG------MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
            V       EI   L         + + L+D  +E L+  THGFVGADLAAL  EAA+V 
Sbjct: 431 KVSKANSEDEIKEILKEDGNVYVEVRNRLIDKLLEELAEVTHGFVGADLAALAREAAMVV 490

Query: 644 LRR 646
           LRR
Sbjct: 491 LRR 493



 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/219 (47%), Positives = 134/219 (61%), Gaps = 20/219 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                LG+ P KGVLL+GPPGTGKT LA+  A +S  N   V GPEV+S+  GESE+ + 
Sbjct: 571 KAFKKLGITPPKGVLLYGPPGTGKTLLAKAVATESEANFIAVRGPEVLSKWVGESEKRIR 630

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           E+F  A Q+APA++FIDE+DAIAPAR    GE+++ R++  LL  MDG+    GV+VIAA
Sbjct: 631 EIFRKARQAAPAIIFIDEIDAIAPARGTSEGEKVTDRIINQLLTEMDGLVENSGVVVIAA 690

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD ++PAL RPGR DR I                 VP+P +  R EI       M  
Sbjct: 691 TNRPDILDPALLRPGRFDRLI----------------LVPAPDEEARFEIFKVHTRSMPL 734

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +  D ++  L+  T G+ GAD+AA+C EAAL  LRR  K
Sbjct: 735 A-DDVDLRELARRTEGYTGADIAAVCREAALNALRRVVK 772


>gi|448329681|ref|ZP_21518978.1| AAA family ATPase, CDC48 subfamily protein [Natrinema versiforme JCM
            10478]
 gi|445613605|gb|ELY67301.1| AAA family ATPase, CDC48 subfamily protein [Natrinema versiforme JCM
            10478]
          Length = 743

 Score =  317 bits (812), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 208/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  + E F+R+G  P
Sbjct: 436  DFSGALNEVEPSAMREVLVELPKISWDDVGGLHDAKEQVQESVEWPLSNPERFERLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMGNVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH    P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVDGRERILDIHTEDTPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+++  +FQ
Sbjct: 675  REAAIEALREDEEADIVEMRHFRQAMENVRPTITDDILDYYEQIEEEFQ 723



 Score =  223 bits (567), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 117/264 (44%), Positives = 163/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVSLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  Q    A+  V+PS
Sbjct: 424  PSLIDRMIVKRQDFSGALNEVEPS 447



 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVSLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 124/215 (57%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FERLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+     V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEEMGNVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL       E + 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDVDGRERILDI---HTEDTP 648

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           L ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 649 LAADVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|321478758|gb|EFX89715.1| hypothetical protein DAPPUDRAFT_40651 [Daphnia pulex]
          Length = 501

 Score =  317 bits (812), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 143/271 (52%), Positives = 203/271 (74%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D ++A   V+PSAMREV++EVP V+W D+GGQ E+K +L +AVEWP ++ EAF+R+G  P
Sbjct: 209  DTKQALHLVKPSAMREVLVEVPNVRWTDIGGQAELKLKLKQAVEWPLRYPEAFQRLGVEP 268

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+LMFGPPGCSKT++A+A+A+E+GLNF+AVKGPELFSKWVGESE+AVR +F +AR  A
Sbjct: 269  PRGLLMFGPPGCSKTMIAKALATESGLNFIAVKGPELFSKWVGESERAVREVFRRARQVA 328

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+F DE+D L + RG  S    V DRV++QLL E+DG+    +VTV+AATNRPD ID 
Sbjct: 329  PAIVFLDELDALGSARGSGSTSAGVGDRVLAQLLTEMDGIEALKDVTVVAATNRPDMIDK 388

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR++YV  P+E  R+EI ++    +P   +V++  L   + G +GA+++ +C
Sbjct: 389  ALLRPGRLDRIVYVSLPDEATRKEILQLKFNNMPIHPEVSLDWLVSNTSGYSGAEVTAVC 448

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQP 1019
             EAA+ A+EE+++A +I  +H   ++  V P
Sbjct: 449  NEAALRALEEDIEAKQICRRHFDFSLSVVTP 479



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/205 (41%), Positives = 129/205 (62%), Gaps = 17/205 (8%)

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           +G+LL+GPPGTGK+ L R  A    V + T+ GPE+ S+ YGE+E  L E F+ A +   
Sbjct: 2   RGMLLYGPPGTGKSLLVRAVAGHFKVPMITIQGPELFSKYYGETEARLREKFEEAIKKDC 61

Query: 505 AVVFIDELDAIAPARKDGGEELS---QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
            ++++DE+D++ P R  G    S   +R+VATLL+++D V     V++I  ++RPD+++ 
Sbjct: 62  CIIYLDEIDSLCPKRDSGSSSHSDQERRVVATLLSMIDSVPPQARVVIIGVSSRPDALDS 121

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
           A+RRPGRLDRE+EI                P+ A+R +IL+ LL  + H L   E+++L+
Sbjct: 122 AMRRPGRLDRELEIR--------------APTVAERKDILNVLLRKIPHRLETKEIDHLA 167

Query: 622 MATHGFVGADLAALCNEAALVCLRR 646
             THGFVGADL+ LC EA+L   +R
Sbjct: 168 SITHGFVGADLSLLCAEASLAAAKR 192



 Score =  157 bits (398), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 124/209 (59%), Gaps = 19/209 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P +G+L+ GPPG  KT +A+  A +SG+N   V GPE+ S+  GESE+A+ EVF  
Sbjct: 264 LGVEPPRGLLMFGPPGCSKTMIAKALATESGLNFIAVKGPELFSKWVGESERAVREVFRR 323

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A Q APA+VF+DELDA+  AR  G     +  R++A LL  MDG+     V V+AATNRP
Sbjct: 324 ARQVAPAIVFLDELDALGSARGSGSTSAGVGDRVLAQLLTEMDGIEALKDVTVVAATNRP 383

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME-HSLLDS 615
           D I+ AL RPGRLDR + + +              P  A R EIL    + M  H   + 
Sbjct: 384 DMIDKALLRPGRLDRIVYVSL--------------PDEATRKEILQLKFNNMPIHP--EV 427

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCL 644
            +++L   T G+ GA++ A+CNEAAL  L
Sbjct: 428 SLDWLVSNTSGYSGAEVTAVCNEAALRAL 456



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 128/225 (56%), Gaps = 12/225 (5%)

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  K+L+ RAVA    +  + ++GPELFSK+ GE+E  +R  F +A    
Sbjct: 1    PRGMLLYGPPGTGKSLLVRAVAGHFKVPMITIQGPELFSKYYGETEARLREKFEEAIKKD 60

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSD---RVMSQLLVELDGLHQRVNVTVIAATNRPDK 925
              II+ DEID L   R  +S   S SD   RV++ LL  +D +  +  V +I  ++RPD 
Sbjct: 61   CCIIYLDEIDSLCPKR--DSGSSSHSDQERRVVATLLSMIDSVPPQARVVIIGVSSRPDA 118

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN-IRELACLSEGCTGADI 984
            +D A+ RPGR DR L +  P   +R++I  + LRKIP   +   I  LA ++ G  GAD+
Sbjct: 119  LDSAMRRPGRLDRELEIRAPTVAERKDILNVLLRKIPHRLETKEIDHLASITHGFVGADL 178

Query: 985  SLICREAAISAIEENLDASRIT------MQHLKTAIRHVQPSEIH 1023
            SL+C EA+++A +  +     T       +  K A+  V+PS + 
Sbjct: 179  SLLCAEASLAAAKRIISGPASTGEVFLLAEDTKQALHLVKPSAMR 223


>gi|432328549|ref|YP_007246693.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum sp. MAR08-339]
 gi|432135258|gb|AGB04527.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum sp. MAR08-339]
          Length = 728

 Score =  317 bits (812), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 155/297 (52%), Positives = 209/297 (70%), Gaps = 13/297 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +++PS MREV++E P V W+D+GG   VK +L E VEWP K+++ F  +  + 
Sbjct: 430  DFMDAYREMQPSTMREVLIEKPNVHWDDIGGLENVKQELREVVEWPLKYRKLFAHMKVKI 489

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPG  KTL+A+AVA+E+  NF++VKGPE  SKWVGESEKAVR +F KAR  A
Sbjct: 490  PKGILLYGPPGTGKTLLAKAVATESEANFISVKGPEFLSKWVGESEKAVREVFRKARQAA 549

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IF DEID +A +RG +  G  V++RV+SQLL E+DGL +  NVTVIAATNRPD +DP
Sbjct: 550  PAVIFIDEIDAVAPVRGMDL-GTRVTERVVSQLLTEMDGLEELHNVTVIAATNRPDMLDP 608

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDRL+YV  P+   R EIF+IHLR  P + DV+I  LA  +EG TGADI  +C
Sbjct: 609  ALLRPGRFDRLIYVPVPDRDARREIFKIHLRGKPLAEDVDIDALAERTEGYTGADIEAVC 668

Query: 989  REAAISAIE---------ENLDASRITMQHLKTAIRHVQP---SEIHSYKELSAKFQ 1033
             EA I A+          EN + +RI+M+H + A++ V+P    E   Y++++ KF+
Sbjct: 669  NEATILALREYIQSGKDPENPNDARISMKHFEEALKRVKPLSKEEKEMYEKMAEKFR 725



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 175/267 (65%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P V +ED+GG +E   ++ E VE P +H E F+R+G  PP G+L++GPPG  KTL+A+A
Sbjct: 177  IPTVTYEDIGGLKEEIRKIREMVELPLRHPELFERLGIEPPKGVLLYGPPGTGKTLLAKA 236

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+EA  +F+ + GPE+ SK+ G+SE+ +R +F +A+ NAPSIIF DEID +A  R + S
Sbjct: 237  VANEANAHFIYLSGPEIMSKYYGQSEENLREIFKEAQENAPSIIFIDEIDSIAPKRDEVS 296

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V  RV++QLL  +DGL  R  V VI ATNRP+ +DPAL RPGRFDR + +G P+  
Sbjct: 297  G--EVERRVVAQLLALMDGLESRGKVVVIGATNRPNALDPALRRPGRFDREIEIGIPDRK 354

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDAS 1003
             R+EI  IH R +P + DV++ +LA ++ G  GAD++ + +EAA+ A+     E +++  
Sbjct: 355  ARKEILEIHTRGVPLADDVDLDKLADMTHGYVGADLAALVKEAAMRALRRIMPEIDMEME 414

Query: 1004 RITMQHLKT----------AIRHVQPS 1020
            +I ++ L+           A R +QPS
Sbjct: 415  KIPVEILEKIEVNWDDFMDAYREMQPS 441



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 152/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   +++++ +          LG+ P KGVLL+GPPGTGKT LA+  A+++  +
Sbjct: 185 IGGLKEEIRKIREMVELPLRHPELFERLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAH 244

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              ++GPE++S+ YG+SE+ L E+F  A ++AP+++FIDE+D+IAP R +   E+ +R+V
Sbjct: 245 FIYLSGPEIMSKYYGQSEENLREIFKEAQENAPSIIFIDEIDSIAPKRDEVSGEVERRVV 304

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNRP++++PALRRPGR DREIEI               +
Sbjct: 305 AQLLALMDGLESRGKVVVIGATNRPNALDPALRRPGRFDREIEI--------------GI 350

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     G+  +  D +++ L+  THG+VGADLAAL  EAA+  LRR
Sbjct: 351 PDRKARKEILEIHTRGVPLA-DDVDLDKLADMTHGYVGADLAALVKEAAMRALRR 404



 Score =  181 bits (458), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 146/245 (59%), Gaps = 19/245 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++++      +   + + ++  KG+LL+GPPGTGKT LA+  A +S  N
Sbjct: 458 IGGLENVKQELREVVEWPLKYRKLFAHMKVKIPKGILLYGPPGTGKTLLAKAVATESEAN 517

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
             +V GPE +S+  GESE+A+ EVF  A Q+APAV+FIDE+DA+AP R  D G  +++R+
Sbjct: 518 FISVKGPEFLSKWVGESEKAVREVFRKARQAAPAVIFIDEIDAVAPVRGMDLGTRVTERV 577

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ LL  MDG+     V VIAATNRPD ++PAL RPGR DR I +               
Sbjct: 578 VSQLLTEMDGLEELHNVTVIAATNRPDMLDPALLRPGRFDRLIYV--------------P 623

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           VP    R EI    L G   +  D +++ L+  T G+ GAD+ A+CNEA ++ LR Y  I
Sbjct: 624 VPDRDARREIFKIHLRGKPLA-EDVDIDALAERTEGYTGADIEAVCNEATILALREY--I 680

Query: 651 QTSSD 655
           Q+  D
Sbjct: 681 QSGKD 685


>gi|397652469|ref|YP_006493050.1| cell division protein CDC48 [Pyrococcus furiosus COM1]
 gi|393190060|gb|AFN04758.1| cell division protein CDC48 [Pyrococcus furiosus COM1]
          Length = 796

 Score =  317 bits (812), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 156/311 (50%), Positives = 217/311 (69%), Gaps = 21/311 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++E+P V W+D+GG  EVK QL EAVEWP K+ EAF+
Sbjct: 485  LKVTRRDFYEALKMVEPSALREVLIEIPNVHWDDIGGLEEVKQQLREAVEWPLKYPEAFR 544

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A++GPE+ SKWVGESEK +R +F 
Sbjct: 545  AFGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSKWVGESEKRIREIFR 604

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+IIF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VI ATNR
Sbjct: 605  KARQAAPAIIFIDEIDAIAPTRG--TDVNRVTDRIINQLLTEMDGIVENSGVVVIGATNR 662

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV+++ELA  +EG TGA
Sbjct: 663  PDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRGMPLADDVDLKELARRTEGYTGA 722

Query: 983  DISLICREAAISA---------IEENLDA------SRITMQHLKTAIRHVQPS----EIH 1023
            DI+ +CREAA++A         I+E + A      +++TM+  + A++ + PS     + 
Sbjct: 723  DIAAVCREAALNAMRRALEQGIIKEGMKADEIRKVAKVTMKDFEEALKKIGPSVSKETME 782

Query: 1024 SYKELSAKFQR 1034
             Y ++  KF++
Sbjct: 783  YYLKVQEKFKQ 793



 Score =  209 bits (531), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 102/212 (48%), Positives = 143/212 (67%), Gaps = 2/212 (0%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V +ED+GG ++V  ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 180 VTYEDIGGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 239

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EA   F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E  G 
Sbjct: 240 EANAYFIAINGPEIMSKYYGESEERLREVFREAEENAPAIIFIDEIDAIAPKR-EEVTG- 297

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V  RV++QLL  +DGL  R  V VI ATNRPD IDPAL RPGRFDR + +G P++  R+
Sbjct: 298 EVEKRVVAQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDREIEIGIPDKQGRK 357

Query: 952 EIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
           EI +IH R +P   D    ++  + E   G +
Sbjct: 358 EILQIHTRGMPIEPDFRKDDVLKILEELRGEE 389



 Score =  186 bits (472), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 19/213 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             + G+ P KG+LL+GPPGTGKT LA+  A +S  N   + GPEV+S+  GESE+ + E+
Sbjct: 543 FRAFGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSKWVGESEKRIREI 602

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A Q+APA++FIDE+DAIAP R      ++ R++  LL  MDG+    GV+VI ATNR
Sbjct: 603 FRKARQAAPAIIFIDEIDAIAPTRGTDVNRVTDRIINQLLTEMDGIVENSGVVVIGATNR 662

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLL 613
           PD I+PAL RPGR DR I                 VP+P +  RLEI      GM  +  
Sbjct: 663 PDIIDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRGMPLA-D 705

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           D +++ L+  T G+ GAD+AA+C EAAL  +RR
Sbjct: 706 DVDLKELARRTEGYTGADIAAVCREAALNAMRR 738



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 96/217 (44%), Positives = 131/217 (60%), Gaps = 18/217 (8%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P  ++E +       +DI   GGL      ++++I +          LG+ P KGVLL+G
Sbjct: 168 PVKEVEKRITTGVTYEDI---GGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYG 224

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L EVF  A ++APA++FIDE
Sbjct: 225 PPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREVFREAEENAPAIIFIDE 284

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNRPD+I+PALRRPGR DR
Sbjct: 285 IDAIAPKREEVTGEVEKRVVAQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDR 344

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
           EIEI               +P    R EIL     GM
Sbjct: 345 EIEI--------------GIPDKQGRKEILQIHTRGM 367


>gi|21226549|ref|NP_632471.1| cell division control protein [Methanosarcina mazei Go1]
 gi|452209052|ref|YP_007489166.1| Cell division protein FtsH [Methanosarcina mazei Tuc01]
 gi|20904821|gb|AAM30143.1| Cell division control protein [Methanosarcina mazei Go1]
 gi|452098954|gb|AGF95894.1| Cell division protein FtsH [Methanosarcina mazei Tuc01]
          Length = 792

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 143/272 (52%), Positives = 196/272 (72%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            +FE A M+  PSA+RE+ +E+P V W DVGG  E K  ++EAVEWP K+ E F ++G + 
Sbjct: 489  NFEDALMEAEPSALREIFVEMPSVSWGDVGGLDEAKHSIIEAVEWPIKNPEKFVKMGIKA 548

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPG  KTL+A+AVA E+  NF++VKGPE+FSKW+GESEKA+R  F KAR  +
Sbjct: 549  PKGILLYGPPGTGKTLIAQAVAKESNANFISVKGPEMFSKWLGESEKAIRETFKKARQVS 608

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P ++FFDEID +A ++G ES     S+RV++QLL E+DGL    +V +IAATNRP+ +DP
Sbjct: 609  PCVVFFDEIDSIAGMQGMESTDSRTSERVLNQLLTEMDGLETLKDVVIIAATNRPNLLDP 668

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            A+LRPGRFDRL+YVG P+   R  IF+IH +  P + DVN+  LA  +EG  GADI  +C
Sbjct: 669  AILRPGRFDRLVYVGAPDRKGRLRIFKIHTQNTPLAEDVNLENLADTTEGYVGADIEAVC 728

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REA + A+ EN D   I M+H + A++ V+P+
Sbjct: 729  REAVMFALRENFDIEAIEMRHFREALKKVKPT 760



 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 92/193 (47%), Positives = 128/193 (66%), Gaps = 2/193 (1%)

Query: 774 WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
           +ED+GG  +   ++ E +E P KH E F  +   PP G++++GPPG  KTL+A+AVA+E+
Sbjct: 197 YEDIGGLGDEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGPPGTGKTLIAKAVANES 256

Query: 834 GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
           G +F  + GPE+  K+ GESE+ +R +F +A   APS+IF DEID +A  R  E+    V
Sbjct: 257 GASFHYIAGPEIVGKFYGESEERLRKIFEEATQEAPSVIFIDEIDSIAPKR--ENVTGEV 314

Query: 894 SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
             RV++QLL  LDG+ +R  V VI ATNR D IDPAL RPGRFDR +++G P+  DR EI
Sbjct: 315 ERRVVAQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDREIHIGVPDTKDRYEI 374

Query: 954 FRIHLRKIPCSSD 966
            +IH R +P   D
Sbjct: 375 LQIHTRGMPIEKD 387



 Score =  186 bits (471), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/263 (41%), Positives = 155/263 (58%), Gaps = 30/263 (11%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +        + L + P KGV+L+GPPGTGKT +A+  A++SG +
Sbjct: 200 IGGLGDEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGPPGTGKTLIAKAVANESGAS 259

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              + GPE+V + YGESE+ L ++F+ A+Q AP+V+FIDE+D+IAP R++   E+ +R+V
Sbjct: 260 FHYIAGPEIVGKFYGESEERLRKIFEEATQEAPSVIFIDEIDSIAPKRENVTGEVERRVV 319

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSP 588
           A LL L+DG+     V+VI ATNR D+I+PALRRPGR DREI I   D    + +L+   
Sbjct: 320 AQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDREIHIGVPDTKDRYEILQIHT 379

Query: 589 AAVP----------SPAQRLEI-------------LHALLSGMEHSLLDSEVEYL-SMA- 623
             +P           PA  +EI             +    + ME    +    YL S+A 
Sbjct: 380 RGMPIEKDEESVTGEPAPEVEIGALDEFEVETGTEIEVDEAAMEREKKEKTNLYLMSLAE 439

Query: 624 -THGFVGADLAALCNEAALVCLR 645
            T GFVGADL AL  EAA+ CLR
Sbjct: 440 RTQGFVGADLLALVQEAAMRCLR 462



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/244 (36%), Positives = 136/244 (55%), Gaps = 22/244 (9%)

Query: 413 LGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL + +++I++ +            +G++  KG+LL+GPPGTGKT +A+  A +S  N
Sbjct: 517 VGGLDEAKHSIIEAVEWPIKNPEKFVKMGIKAPKGILLYGPPGTGKTLIAQAVAKESNAN 576

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             +V GPE+ S+  GESE+A+ E F  A Q +P VVF DE+D+IA  +  +      S+R
Sbjct: 577 FISVKGPEMFSKWLGESEKAIRETFKKARQVSPCVVFFDEIDSIAGMQGMESTDSRTSER 636

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++  LL  MDG+     V++IAATNRP+ ++PA+ RPGR DR + +              
Sbjct: 637 VLNQLLTEMDGLETLKDVVIIAATNRPNLLDPAILRPGRFDRLVYV-------------- 682

Query: 590 AVPSPAQRLEI--LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
             P    RL I  +H   + +     D  +E L+  T G+VGAD+ A+C EA +  LR  
Sbjct: 683 GAPDRKGRLRIFKIHTQNTPLAE---DVNLENLADTTEGYVGADIEAVCREAVMFALREN 739

Query: 648 SKIQ 651
             I+
Sbjct: 740 FDIE 743


>gi|330507349|ref|YP_004383777.1| AAA family ATPase [Methanosaeta concilii GP6]
 gi|328928157|gb|AEB67959.1| AAA family ATPase, CDC48 subfamily [Methanosaeta concilii GP6]
          Length = 737

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 212/289 (73%), Gaps = 7/289 (2%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE+A  ++ PSAMREV++EVP+V W D+GG   +K +L+E++EWP K  E F+++G RP
Sbjct: 438  DFEEALKEIEPSAMREVLVEVPRVNWNDMGGLGALKQELIESIEWPIKQPEKFQKMGIRP 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPG  KT++A+AVA+E   NF++++GP++ SKWVGESEKA+R +F KAR  +
Sbjct: 498  PKGILLYGPPGTGKTMIAQAVANETNANFISIRGPQMLSKWVGESEKAIREIFRKARQVS 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D +A +RG +  G  V +RV++QLL ELDGL    +V VIAATNRPD +DP
Sbjct: 558  PAIIFFDELDSIAPMRGMDEGG-RVMERVVNQLLAELDGLEALKDVVVIAATNRPDILDP 616

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDR+L VGPP+   R EI +IH  + P   DV++ ELA L++G  G+D+  +C
Sbjct: 617  ALLRSGRFDRMLLVGPPDRQGRHEILKIHASRTPKGEDVSLEELAELTDGYVGSDLDNLC 676

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS-EIH---SYKELSAKFQ 1033
            REAA+ A+ E LD  R+ M+H + A++ V+PS E H    Y+ +  +F+
Sbjct: 677  REAAMLALREGLD--RVEMRHYREALKKVRPSVEEHMLSYYERIGERFK 723



 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 113/263 (42%), Positives = 170/263 (64%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +E+VGG      ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 189  ITYENVGGLGSEVQRVREMIELPMKHPEIFQKLGIEPPKGVLLYGPPGTGKTLIAKAVAN 248

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+G NF+++ GPE+ SK+ GESE+ +R +F +A+ +APSIIF DEID +A  RG+ +   
Sbjct: 249  ESGANFISIAGPEIMSKYYGESEQRLREIFEEAQKSAPSIIFIDEIDSIAPKRGEVTG-- 306

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R  V VI ATNR + IDPAL RPGRFDR + VG P+   R 
Sbjct: 307  EVERRVVAQLLAMMDGLKERGQVVVIGATNREEAIDPALRRPGRFDREIEVGVPDREGRI 366

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI +IH+  +P + DVN+  LA    G  GAD++ +C+EAA+ A+              +
Sbjct: 367  EILQIHMHSMPVADDVNLEGLADRMHGFVGADVNALCKEAAMKALRRYLPDLTSEDEIPQ 426

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E +D  ++     + A++ ++PS
Sbjct: 427  EIIDQMQVMGADFEEALKEIEPS 449



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/302 (42%), Positives = 179/302 (59%), Gaps = 34/302 (11%)

Query: 355 VTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLG 414
           VTE+  H  N  V+   T++ L   L   +KS+R  ++    I ++NV           G
Sbjct: 154 VTET--HPDNVVVVCERTEIVL---LEKPAKSVR--SVKATGITYENV-----------G 195

Query: 415 GLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLF 473
           GL  E   ++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++SG N  
Sbjct: 196 GLGSEVQRVREMIELPMKHPEIFQKLGIEPPKGVLLYGPPGTGKTLIAKAVANESGANFI 255

Query: 474 TVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVAT 533
           ++ GPE++S+ YGESEQ L E+F+ A +SAP+++FIDE+D+IAP R +   E+ +R+VA 
Sbjct: 256 SIAGPEIMSKYYGESEQRLREIFEEAQKSAPSIIFIDEIDSIAPKRGEVTGEVERRVVAQ 315

Query: 534 LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPS 593
           LL +MDG+     V+VI ATNR ++I+PALRRPGR DREIE+               VP 
Sbjct: 316 LLAMMDGLKERGQVVVIGATNREEAIDPALRRPGRFDREIEV--------------GVPD 361

Query: 594 PAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTS 653
              R+EIL   +  M  +  D  +E L+   HGFVGAD+ ALC EAA+  LRRY    TS
Sbjct: 362 REGRIEILQIHMHSMPVA-DDVNLEGLADRMHGFVGADVNALCKEAAMKALRRYLPDLTS 420

Query: 654 SD 655
            D
Sbjct: 421 ED 422



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 139/238 (58%), Gaps = 18/238 (7%)

Query: 409 DISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           D+  LG L +E  +++ I            +G+RP KG+LL+GPPGTGKT +A+  A+++
Sbjct: 465 DMGGLGALKQE--LIESIEWPIKQPEKFQKMGIRPPKGILLYGPPGTGKTMIAQAVANET 522

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELS 527
             N  ++ GP+++S+  GESE+A+ E+F  A Q +PA++F DELD+IAP R  D G  + 
Sbjct: 523 NANFISIRGPQMLSKWVGESEKAIREIFRKARQVSPAIIFFDELDSIAPMRGMDEGGRVM 582

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V  LL  +DG+     V+VIAATNRPD ++PAL R GR DR           +L   
Sbjct: 583 ERVVNQLLAELDGLEALKDVVVIAATNRPDILDPALLRSGRFDR-----------MLLVG 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P   P    R EIL    S       D  +E L+  T G+VG+DL  LC EAA++ LR
Sbjct: 632 P---PDRQGRHEILKIHASRTPKG-EDVSLEELAELTDGYVGSDLDNLCREAAMLALR 685


>gi|448697529|ref|ZP_21698569.1| ATPase AAA [Halobiforma lacisalsi AJ5]
 gi|445781482|gb|EMA32338.1| ATPase AAA [Halobiforma lacisalsi AJ5]
          Length = 743

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 206/289 (71%), Gaps = 4/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG ++ K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLQDAKDQVQESVEWPLSNPERFDRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG    G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 615

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DV +RE+A +++G  G+D+  I 
Sbjct: 616  ALLRSGRFDRLVMIGQPDVDGRERILEIHTQDTPLAADVTLREIAEITDGYVGSDLESIA 675

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+ +  +FQ
Sbjct: 676  REAAIEALREDEEADVVEMRHFRQAMENVRPTITDDILDYYERIEEEFQ 724



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 117/264 (44%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVNLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  150 bits (378), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 123/215 (57%), Gaps = 23/215 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG--GEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q +P V+F DELDA+AP R  G  G  +S+R+V  LL  +DG+   + V+VI AT
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEEMEDVMVIGAT 607

Query: 554 NRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           NRPD I+PAL R GR DR + I   D+     +L+      P  A               
Sbjct: 608 NRPDMIDPALLRSGRFDRLVMIGQPDVDGRERILEIHTQDTPLAA--------------- 652

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 653 ---DVTLREIAEITDGYVGSDLESIAREAAIEALR 684


>gi|18977335|ref|NP_578692.1| cell division protein CDC48 [Pyrococcus furiosus DSM 3638]
 gi|397651469|ref|YP_006492050.1| cell division protein CDC48 [Pyrococcus furiosus COM1]
 gi|18893012|gb|AAL81087.1| cell division control protein 48, aaa family [Pyrococcus furiosus DSM
            3638]
 gi|393189060|gb|AFN03758.1| cell division protein CDC48 [Pyrococcus furiosus COM1]
          Length = 837

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 155/307 (50%), Positives = 211/307 (68%), Gaps = 17/307 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++E+P V W+D+GG  EVK QL EAVEWP K+ +AFK
Sbjct: 512  LKVTRRDFYEALKMVEPSALREVLIEIPNVHWDDIGGLEEVKQQLREAVEWPLKYPKAFK 571

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A++GPE+ SKWVGESEK +R +F 
Sbjct: 572  RLGISPPKGILLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSKWVGESEKRIREIFR 631

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+IIF DEID +A  RG   +G  V+DR+++QLL E+DG+ +   V VI ATNR
Sbjct: 632  KARQAAPAIIFIDEIDAIAPARGG-YEGERVTDRLINQLLTEMDGIQENSGVVVIGATNR 690

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV+++ELA  +EG TGA
Sbjct: 691  PDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRGMPLADDVDLKELARRTEGYTGA 750

Query: 983  DISLICREAAISAIEE----------------NLDASRITMQHLKTAIRHVQPSEIHSYK 1026
            DI+ +CREAA++A+                   LD   +T +  + A++ V+PS      
Sbjct: 751  DIAAVCREAALNALRRVVKSVPKEELEEESEEFLDKLIVTRKDFEEALKKVKPSVNKYMM 810

Query: 1027 ELSAKFQ 1033
            E   +F+
Sbjct: 811  EYYRQFE 817



 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 110/214 (51%), Positives = 148/214 (69%), Gaps = 2/214 (0%)

Query: 755 MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
           ++V P A+     +VP+V +ED+GG +E   ++ E VE P KH E F+R+G  PP G+L+
Sbjct: 189 VEVLPQAVEVREEKVPEVTYEDIGGLKEAIEKIREMVELPLKHPELFERLGIEPPKGVLL 248

Query: 815 FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
           +GPPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF 
Sbjct: 249 YGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIFI 308

Query: 875 DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
           DEID +A  R +E  G  V  RV+SQLL  +DGL  R  V VIAATNRPD IDPAL RPG
Sbjct: 309 DEIDAIAPKR-EEVVG-EVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPG 366

Query: 935 RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN 968
           RFDR + VG P++  R+EI +IH R +P   D +
Sbjct: 367 RFDREIEVGVPDKQGRKEILQIHTRGMPIEPDYD 400



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/219 (47%), Positives = 135/219 (61%), Gaps = 20/219 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                LG+ P KG+LL+GPPGTGKT LA+  A +S  N   + GPEV+S+  GESE+ + 
Sbjct: 568 KAFKRLGISPPKGILLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSKWVGESEKRIR 627

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKD-GGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           E+F  A Q+APA++FIDE+DAIAPAR    GE ++ R++  LL  MDG+    GV+VI A
Sbjct: 628 EIFRKARQAAPAIIFIDEIDAIAPARGGYEGERVTDRLINQLLTEMDGIQENSGVVVIGA 687

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD I+PAL RPGR DR I                 VP+P +  RLEI      GM  
Sbjct: 688 TNRPDIIDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRGMPL 731

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +  D +++ L+  T G+ GAD+AA+C EAAL  LRR  K
Sbjct: 732 A-DDVDLKELARRTEGYTGADIAAVCREAALNALRRVVK 769



 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 166/320 (51%), Gaps = 78/320 (24%)

Query: 391 TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
            LP A ++  + V     +DI   GGL +    +++++ +          LG+ P KGVL
Sbjct: 191 VLPQAVEVREEKVPEVTYEDI---GGLKEAIEKIREMVELPLKHPELFERLGIEPPKGVL 247

Query: 449 LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
           L+GPPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L E+F  A ++APA++F
Sbjct: 248 LYGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIF 307

Query: 509 IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
           IDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+I+PALRRPGR
Sbjct: 308 IDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGR 367

Query: 569 LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM-------EHSLLDSE----- 616
            DREIE+               VP    R EIL     GM       + S++ +      
Sbjct: 368 FDREIEV--------------GVPDKQGRKEILQIHTRGMPIEPDYDKESVIKALKELEK 413

Query: 617 ------------VEYLSMAT-----------HG------------------------FVG 629
                       +E +S AT           HG                        FVG
Sbjct: 414 EEKYEKSEIKKIIEEISKATSEEEVKEILKKHGKIFMDVRAKLIDKLLDELAEVTHGFVG 473

Query: 630 ADLAALCNEAALVCLRRYSK 649
           ADLAAL  EAA+V LRR  K
Sbjct: 474 ADLAALAREAAMVVLRRLIK 493


>gi|195578805|ref|XP_002079254.1| GD22101 [Drosophila simulans]
 gi|194191263|gb|EDX04839.1| GD22101 [Drosophila simulans]
          Length = 799

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 146/278 (52%), Positives = 203/278 (73%), Gaps = 3/278 (1%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L++   + A  +++PSAMREV++E P V+W D+GGQ E++  + +A+EWP  H E F+R+
Sbjct: 505  LQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHAEKFQRL 564

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP GILMFGPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR +F KA
Sbjct: 565  GIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKA 624

Query: 865  RANAPSIIFFDEIDGLAAIR---GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            R  AP+I+FFDEID +   R      S G SV +RV++QLL ELDG+    NVT++AATN
Sbjct: 625  RQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATN 684

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR+LYVG P    R EI +I LR +P S+DV++ +L  L+EG +G
Sbjct: 685  RPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDVEKLVQLTEGYSG 744

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            A+I  +C EAA+ A+E++ +A  +     + A++ V P
Sbjct: 745  AEIQAVCHEAALRALEQSFEAEHVKWTDFEHALKAVPP 782



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/294 (35%), Positives = 150/294 (51%), Gaps = 33/294 (11%)

Query: 378 PPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKS-TL 436
           P L A    ++   +    IE  NVQ       S +GG S+    ++  I    + +   
Sbjct: 508 PHLQAALTRIKPSAMREVLIECPNVQW------SDIGGQSELRLAMQQAIEWPLLHAEKF 561

Query: 437 SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
             LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF
Sbjct: 562 QRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVF 621

Query: 497 DSASQSAPAVVFIDELDAIAPAR-----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
             A Q APA+VF DE+DAI   R        G  + +R++  LL  +DGV     V ++A
Sbjct: 622 RKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVA 681

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+ AL RPGR+DR + +               +P    R EIL   L  M  S
Sbjct: 682 ATNRPDMIDKALLRPGRIDRILYV--------------GLPQCEARREILKIKLRAMPIS 727

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFE 665
             D +VE L   T G+ GA++ A+C+EAAL  L      + S +  H   T FE
Sbjct: 728 -NDVDVEKLVQLTEGYSGAEIQAVCHEAALRAL------EQSFEAEHVKWTDFE 774



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 32/261 (12%)

Query: 394 NAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPP 453
           N Q E Q +   + +  S++GGL ++  ++++ +  +    TL + GLR ++G+LL+G  
Sbjct: 257 NQQEEEQKISHRITK--SQIGGLDRQLQLVEESMEYALGFRTLPA-GLRVSRGLLLYGAT 313

Query: 454 GTGKTS-LARLCA-----HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ--SAPA 505
           G GK+  L  +CA         V L  +N  EV S+  GE+EQ L  +F+ A      P 
Sbjct: 314 GCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAHHLYPQPT 373

Query: 506 VVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV-----CRTDGVLVIAATNRPDSIE 560
           ++ I+++  + P  K    +L +R+    L+L+D +      +     V+A +++ D++ 
Sbjct: 374 LLLIEDVHNLCP--KQESSDLVKRVSLAFLSLLDQLSTPSQLKGSKTFVLATSSQIDALH 431

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
           P++RR GRLD E+E+                PS   R+EIL  L+  +EH L D EVE++
Sbjct: 432 PSIRRAGRLDNEVEL--------------GAPSSQARMEILRCLIQSVEHQLSDEEVEHV 477

Query: 621 SMATHGFVGADLAALCNEAAL 641
           +  THG+VGADLA L   A L
Sbjct: 478 ASITHGYVGADLANLVYAAML 498



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 124/249 (49%), Gaps = 25/249 (10%)

Query: 788  MEAVEWPQKHQEAFKRI--GTRPPTGILMFGPPGCSKTLMARAVA------SEAGLNFLA 839
            ++ VE   ++   F+ +  G R   G+L++G  GC K+++  A+       S+  +  + 
Sbjct: 281  LQLVEESMEYALGFRTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIR 340

Query: 840  VKGPELFSKWVGESEKAVRSLFAKAR--ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRV 897
            +   E++SK++GE+E+ + ++F +A      P+++  +++  L   + + SD V    RV
Sbjct: 341  INSGEVYSKFLGETEQKLGAIFERAHHLYPQPTLLLIEDVHNLCP-KQESSDLVK---RV 396

Query: 898  MSQLLVELDGLHQRVNVT-----VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
                L  LD L     +      V+A +++ D + P++ R GR D  + +G P+   R E
Sbjct: 397  SLAFLSLLDQLSTPSQLKGSKTFVLATSSQIDALHPSIRRAGRLDNEVELGAPSSQARME 456

Query: 953  IFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            I R  ++ +    SD  +  +A ++ G  GAD++ +   A + A       + + M HL+
Sbjct: 457  ILRCLIQSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQA-----QPNPLQMPHLQ 511

Query: 1012 TAIRHVQPS 1020
             A+  ++PS
Sbjct: 512  AALTRIKPS 520


>gi|195472429|ref|XP_002088503.1| GE12088 [Drosophila yakuba]
 gi|194174604|gb|EDW88215.1| GE12088 [Drosophila yakuba]
          Length = 799

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 145/278 (52%), Positives = 203/278 (73%), Gaps = 3/278 (1%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L+++  + A  +++PSAMREV++E P V+W D+GGQ E++  + +A+EWP  H E F+R+
Sbjct: 505  LQMLHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHAEKFQRL 564

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP GILMFGPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR +F KA
Sbjct: 565  GIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKA 624

Query: 865  RANAPSIIFFDEIDGLAAIR---GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            R  AP+I+FFDEID +   R        G SV +RV++QLL ELDG+    NVT++AATN
Sbjct: 625  RQVAPAIVFFDEIDAIGGERSEGDGSGSGSSVKERVLTQLLTELDGVEALQNVTIVAATN 684

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR+LYVG P    R EI +I LR +P S+DV++ +L  L+EG +G
Sbjct: 685  RPDMIDKALLRPGRIDRILYVGLPQCEARSEILKIKLRAMPISNDVDMEKLVQLTEGYSG 744

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            A+I  +C EAA+ A+E++ +A  +     + A++ V P
Sbjct: 745  AEIQAVCHEAALRALEQSFEAEDVKWTDFEHALKAVPP 782



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 122/213 (57%), Gaps = 20/213 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF  
Sbjct: 564 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRK 623

Query: 499 ASQSAPAVVFIDELDAIAPAR-----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           A Q APA+VF DE+DAI   R        G  + +R++  LL  +DGV     V ++AAT
Sbjct: 624 ARQVAPAIVFFDEIDAIGGERSEGDGSGSGSSVKERVLTQLLTELDGVEALQNVTIVAAT 683

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+ AL RPGR+DR + + +              P    R EIL   L  M  S  
Sbjct: 684 NRPDMIDKALLRPGRIDRILYVGL--------------PQCEARSEILKIKLRAMPIS-N 728

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           D ++E L   T G+ GA++ A+C+EAAL  L +
Sbjct: 729 DVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQ 761



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 131/244 (53%), Gaps = 30/244 (12%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTS-LARLCA---- 465
           S++GGL ++  ++++ +  +    TL + GLR ++G+LL+G  G GK+  L  +CA    
Sbjct: 272 SQIGGLDRQLQLVEESMEYALGFRTLPA-GLRVSRGLLLYGATGCGKSMVLEAMCALAEE 330

Query: 466 -HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP--AVVFIDELDAIAPARKDG 522
                V L  +N  EV S+  GE+EQ L  +F+ A    P   ++ I+++  + P  K  
Sbjct: 331 RSQERVQLIRINSGEVYSKFLGETEQKLSAIFERAYNHYPHPTLLLIEDVHNLCP--KQE 388

Query: 523 GEELSQRMVATLLNLMDGV-----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
             +L +R+    L+L+D +      +     V+A T++ D++ P++RR GRLD E+E+  
Sbjct: 389 SSDLVKRVSLAFLSLLDQLSTPSQLKGSKTFVLATTSQIDALHPSIRRAGRLDSEVEL-- 446

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                         PS   RL+IL  L+  +EH L D +VE+++  THG+VGADLA L  
Sbjct: 447 ------------GAPSSQARLQILRCLIQSVEHQLSDEDVEHVASITHGYVGADLANLVY 494

Query: 638 EAAL 641
            A L
Sbjct: 495 AAIL 498



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 126/249 (50%), Gaps = 25/249 (10%)

Query: 788  MEAVEWPQKHQEAFKRI--GTRPPTGILMFGPPGCSKTLMARAVA------SEAGLNFLA 839
            ++ VE   ++   F+ +  G R   G+L++G  GC K+++  A+       S+  +  + 
Sbjct: 281  LQLVEESMEYALGFRTLPAGLRVSRGLLLYGATGCGKSMVLEAMCALAEERSQERVQLIR 340

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARANAP--SIIFFDEIDGLAAIRGKESDGVSVSDRV 897
            +   E++SK++GE+E+ + ++F +A  + P  +++  +++  L   + + SD V    RV
Sbjct: 341  INSGEVYSKFLGETEQKLSAIFERAYNHYPHPTLLLIEDVHNLCP-KQESSDLVK---RV 396

Query: 898  MSQLLVELDGLHQRVNVT-----VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
                L  LD L     +      V+A T++ D + P++ R GR D  + +G P+   R +
Sbjct: 397  SLAFLSLLDQLSTPSQLKGSKTFVLATTSQIDALHPSIRRAGRLDSEVELGAPSSQARLQ 456

Query: 953  IFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            I R  ++ +    SD ++  +A ++ G  GAD++ +   A + A       + + M HL+
Sbjct: 457  ILRCLIQSVEHQLSDEDVEHVASITHGYVGADLANLVYAAILQA-----QPNPLQMLHLQ 511

Query: 1012 TAIRHVQPS 1020
             A+  ++PS
Sbjct: 512  AALTRIKPS 520


>gi|284165453|ref|YP_003403732.1| ATPase AAA [Haloterrigena turkmenica DSM 5511]
 gi|284015108|gb|ADB61059.1| AAA family ATPase, CDC48 subfamily [Haloterrigena turkmenica DSM
            5511]
          Length = 743

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 206/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG    K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLHSAKEQVQESVEWPLSNPERFDRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMENVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH    P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVDGRERILEIHTENTPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+++  +FQ
Sbjct: 675  REAAIEALREDEEADIVEMRHFRQAMENVRPTITDDILDYYEQIEEEFQ 723



 Score =  223 bits (567), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 163/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVDLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  Q  + A+  V+PS
Sbjct: 424  PSLIDRMIVKRQDFRGALNEVEPS 447



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 154/236 (65%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D ++ +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVDLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 126/215 (58%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEEMENVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL       E++ 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDVDGRERILEI---HTENTP 648

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           L ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 649 LAADVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|448312022|ref|ZP_21501775.1| ATPase AAA [Natronolimnobius innermongolicus JCM 12255]
 gi|445603643|gb|ELY57605.1| ATPase AAA [Natronolimnobius innermongolicus JCM 12255]
          Length = 743

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 207/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG    K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLHTAKEQVQESVEWPLNNPERFDRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMENVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVEGRERILDIHTQDTPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+++  +FQ
Sbjct: 675  REAAIEALREDHEADVVEMRHFRQAMENVRPTITDDILDYYEQIEEEFQ 723



 Score =  219 bits (559), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 114/264 (43%), Positives = 163/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVDLSHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 154/236 (65%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D ++ +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVDLSHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 125/215 (58%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEEMENVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL       + + 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDVEGRERILDI---HTQDTP 648

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           L ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 649 LAADVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|383625075|ref|ZP_09949481.1| ATPase AAA [Halobiforma lacisalsi AJ5]
          Length = 743

 Score =  316 bits (810), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 206/289 (71%), Gaps = 4/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG ++ K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLQDAKDQVQESVEWPLSNPERFDRLGVAP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG    G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 615

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DV +RE+A +++G  G+D+  I 
Sbjct: 616  ALLRSGRFDRLVMIGQPDVDGRERILEIHTQDTPLAADVTLREIAEITDGYVGSDLESIA 675

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+ +  +FQ
Sbjct: 676  REAAIEALREDEEADVVEMRHFRQAMENVRPTITDDILDYYERIEEEFQ 724



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/264 (44%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVNLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 123/215 (57%), Gaps = 23/215 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FDRLGVAPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG--GEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q +P V+F DELDA+AP R  G  G  +S+R+V  LL  +DG+   + V+VI AT
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEEMEDVMVIGAT 607

Query: 554 NRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           NRPD I+PAL R GR DR + I   D+     +L+      P  A               
Sbjct: 608 NRPDMIDPALLRSGRFDRLVMIGQPDVDGRERILEIHTQDTPLAA--------------- 652

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 653 ---DVTLREIAEITDGYVGSDLESIAREAAIEALR 684


>gi|397773319|ref|YP_006540865.1| AAA family ATPase, CDC48 subfamily [Natrinema sp. J7-2]
 gi|448340956|ref|ZP_21529922.1| AAA family ATPase, CDC48 subfamily protein [Natrinema gari JCM 14663]
 gi|397682412|gb|AFO56789.1| AAA family ATPase, CDC48 subfamily [Natrinema sp. J7-2]
 gi|445629233|gb|ELY82526.1| AAA family ATPase, CDC48 subfamily protein [Natrinema gari JCM 14663]
          Length = 743

 Score =  316 bits (810), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 206/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG ++ K Q+ E+VEWP    E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLQDAKDQVQESVEWPLSSPERFDRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMGNVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH    P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVDGRERILEIHTENTPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+ +  +FQ
Sbjct: 675  REAAIEALREDEEADIVEMRHFRQAMENVRPTITDDILDYYERIEEEFQ 723



 Score =  222 bits (566), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVSLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVSLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 132/229 (57%), Gaps = 30/229 (13%)

Query: 428 ISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
           +  SV+  LSS      LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++
Sbjct: 474 VQESVEWPLSSPERFDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLL 533

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLM 538
           S+  GESE+A+ + F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +
Sbjct: 534 SKWVGESEKAIRQTFRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTEL 591

Query: 539 DGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL 598
           DG+     V+VI ATNRPD I+PAL R GR DR + I                P    R 
Sbjct: 592 DGLEEMGNVMVIGATNRPDMIDPALLRSGRFDRLVMI--------------GEPDVDGRE 637

Query: 599 EILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            IL       E++ L ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 638 RILEI---HTENTPLAADVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|448315080|ref|ZP_21504733.1| ATPase AAA [Natronococcus jeotgali DSM 18795]
 gi|445612339|gb|ELY66065.1| ATPase AAA [Natronococcus jeotgali DSM 18795]
          Length = 742

 Score =  316 bits (810), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 209/289 (72%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG    K Q+ E+VEWP  + E F+R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLHTAKEQVQESVEWPLNNPERFERLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMENVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DVN++E+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVEGRERILDIHTQGTPLAADVNLQEIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A+ + M+H + A+ +V+P+     +  Y+ +  +FQ
Sbjct: 675  REAAIEALREDHEANIVEMRHFRQAMENVRPTITDDILDYYERIEEEFQ 723



 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 113/264 (42%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG ++   ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQDEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  +A  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVDLAHMADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 154/236 (65%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQDEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D ++ +++  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVDLAHMADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/211 (40%), Positives = 123/211 (58%), Gaps = 16/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FERLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q +P V+F DELDA+AP R  + G  +S+R+V  LL  +DG+   + V+VI ATN
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGRGGETGSNVSERVVNQLLTELDGLEEMENVMVIGATN 607

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PAL R GR DR + I                P    R  IL     G   +  D
Sbjct: 608 RPDMIDPALLRSGRFDRLVMI--------------GEPDVEGRERILDIHTQGTPLA-AD 652

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             ++ ++  T G+VG+DL ++  EAA+  LR
Sbjct: 653 VNLQEIAEITDGYVGSDLESIAREAAIEALR 683


>gi|435848784|ref|YP_007311034.1| AAA family ATPase, CDC48 subfamily [Natronococcus occultus SP4]
 gi|433675052|gb|AGB39244.1| AAA family ATPase, CDC48 subfamily [Natronococcus occultus SP4]
          Length = 742

 Score =  316 bits (809), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 209/289 (72%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG +  K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLQTAKDQVQESVEWPLNNPERFDRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMENVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DVN++E+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVEGRERILDIHTQGTPMAADVNLQEIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A+ + M+H + A+ +V+P+     +  Y+ +  +FQ
Sbjct: 675  REAAIEALREDEEANVVEMRHFRQAMENVRPTITDDILDYYERIEEEFQ 723



 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 113/264 (42%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG ++   ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQDEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  +A  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVDLAHMADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 154/236 (65%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQDEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D ++ +++  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVDLAHMADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 124/213 (58%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FDRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEEMENVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL     G   + 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDVEGRERILDIHTQGTPMA- 650

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D  ++ ++  T G+VG+DL ++  EAA+  LR
Sbjct: 651 ADVNLQEIAEITDGYVGSDLESIAREAAIEALR 683


>gi|448474293|ref|ZP_21602152.1| ATPase AAA [Halorubrum aidingense JCM 13560]
 gi|445817600|gb|EMA67469.1| ATPase AAA [Halorubrum aidingense JCM 13560]
          Length = 740

 Score =  316 bits (809), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 150/289 (51%), Positives = 206/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E K Q+ E+VEWP    E F R+G   
Sbjct: 436  DFSGALTEVEPSAMREVLVELPKISWDDVGGLAEAKQQVQESVEWPLTSPEKFDRMGVDA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPSRGQEM-GNNVSERVVNQLLTELDGLEEMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G PN+  RE+I  IH    P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPNQEGREQILDIHTENTPLAPDVSLREIAEITDGYVGSDLEGIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ ++ DA  + M+H + A+  V+P+     +  Y+E+  +F+
Sbjct: 675  REAAIEALRDDDDAEEVEMKHFRAALESVRPTINEDILAYYEEIEQQFK 723



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F ++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +        S LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 133/227 (58%), Gaps = 26/227 (11%)

Query: 428 ISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
           +  SV+  L+S      +G+   KGVLL+GPPGTGKT +A+  A+++  N  +V GP+++
Sbjct: 474 VQESVEWPLTSPEKFDRMGVDAPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLL 533

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDG 540
           S+  GESE+A+ + F  A Q +P ++F DELD++AP+R ++ G  +S+R+V  LL  +DG
Sbjct: 534 SKWVGESEKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDG 593

Query: 541 VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI 600
           +     V+VI ATNRPD I+PAL R GR DR + I                P+   R +I
Sbjct: 594 LEEMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI--------------GQPNQEGREQI 639

Query: 601 LHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           L       E++ L  +V    +A  T G+VG+DL  +  EAA+  LR
Sbjct: 640 LDI---HTENTPLAPDVSLREIAEITDGYVGSDLEGIAREAAIEALR 683


>gi|305663571|ref|YP_003859859.1| AAA ATPase [Ignisphaera aggregans DSM 17230]
 gi|304378140|gb|ADM27979.1| AAA family ATPase, CDC48 subfamily [Ignisphaera aggregans DSM 17230]
          Length = 737

 Score =  316 bits (809), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 153/296 (51%), Positives = 217/296 (73%), Gaps = 6/296 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF  A   V PS MREV++EVP+V+W+D+GG   VK QL EAVEWP +  + F+
Sbjct: 439  LKVTMSDFFIAMRNVAPSLMREVLIEVPEVRWDDIGGLDLVKQQLREAVEWPLRFPQIFE 498

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G RPP GIL++GPPGC KTL+A+A A+E+G NF+AVKGPE+ SKWVGESEKAVR +F 
Sbjct: 499  QMGIRPPKGILLYGPPGCGKTLLAKAAATESGANFIAVKGPEILSKWVGESEKAVREIFR 558

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP+IIFFDEID +A +RG +  G  V+DR+++QLL E+DG+     V VI ATNR
Sbjct: 559  RARRAAPAIIFFDEIDAIAPVRGHDVSG--VTDRIVNQLLTEMDGIEPLRGVVVIGATNR 616

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR+++V PP+   R EI +IH RKIP + DV++ +LA ++EG +GA
Sbjct: 617  PDLLDPALLRPGRFDRIIFVPPPDLRARYEILKIHTRKIPLADDVDLVQLAKMTEGYSGA 676

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            D+  + REA + A+ E+L    I+M++ + A+ +V+PS     + +Y+++  +  R
Sbjct: 677  DLEALVREAVMLALRESLVPRPISMKYFQKAMEYVKPSLTRERLEAYEKVHEELSR 732



 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 131/286 (45%), Positives = 184/286 (64%), Gaps = 18/286 (6%)

Query: 751  EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
            E   + +R   +R     VP+V WED+G   EVK ++ E VE P KH E F+R+G  PP 
Sbjct: 173  ENTEISIRTEVVRGAPPGVPRVTWEDIGDLEEVKEKIREIVELPLKHPELFERLGIEPPK 232

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            GIL++GPPGC KTL+A+A+A+E G  F+ + GPE+ SK+ GESE+ +R +F +A+ NAP+
Sbjct: 233  GILLYGPPGCGKTLLAKALANETGAYFIPINGPEIMSKFYGESEQRLRQIFDEAKKNAPA 292

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            IIF DEID LA  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRPD +DPAL
Sbjct: 293  IIFIDEIDALAPKR-EEVVG-EVEKRVVAQLLTLMDGLEERGRVIVIGATNRPDAVDPAL 350

Query: 931  LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICRE 990
             RPGRFDR + V PP++  R EI  +H R +P + DV++ +LA ++ G TGAD++ + +E
Sbjct: 351  RRPGRFDREIEVPPPDKKARREILAVHTRNVPLADDVDLDKLAEITYGYTGADLAALVKE 410

Query: 991  AAISAIEE-------NLDAS---------RITMQHLKTAIRHVQPS 1020
            AA+SA+         +LD           ++TM     A+R+V PS
Sbjct: 411  AAMSALRRFLKEHAIDLDKPIPSDLLQRLKVTMSDFFIAMRNVAPS 456



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/216 (47%), Positives = 142/216 (65%), Gaps = 19/216 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A+++G     +NGPE++S+ YGESEQ L ++
Sbjct: 223 FERLGIEPPKGILLYGPPGCGKTLLAKALANETGAYFIPINGPEIMSKFYGESEQRLRQI 282

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           FD A ++APA++FIDE+DA+AP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 283 FDEAKKNAPAIIFIDEIDALAPKREEVVGEVEKRVVAQLLTLMDGLEERGRVIVIGATNR 342

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLL 613
           PD+++PALRRPGR DREIE                VP P +  R EIL      +  +  
Sbjct: 343 PDAVDPALRRPGRFDREIE----------------VPPPDKKARREILAVHTRNVPLA-D 385

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           D +++ L+  T+G+ GADLAAL  EAA+  LRR+ K
Sbjct: 386 DVDLDKLAEITYGYTGADLAALVKEAAMSALRRFLK 421



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/217 (41%), Positives = 127/217 (58%), Gaps = 25/217 (11%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                +G+RP KG+LL+GPPG GKT LA+  A +SG N   V GPE++S+  GESE+A+ 
Sbjct: 495 QIFEQMGIRPPKGILLYGPPGCGKTLLAKAAATESGANFIAVKGPEILSKWVGESEKAVR 554

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           E+F  A ++APA++F DE+DAIAP R      ++ R+V  LL  MDG+    GV+VI AT
Sbjct: 555 EIFRRARRAAPAIIFFDEIDAIAPVRGHDVSGVTDRIVNQLLTEMDGIEPLRGVVVIGAT 614

Query: 554 NRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           NRPD ++PAL RPGR DR I +   D+   + +LK     +P                  
Sbjct: 615 NRPDLLDPALLRPGRFDRIIFVPPPDLRARYEILKIHTRKIP------------------ 656

Query: 611 SLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
             L  +V+ + +A  T G+ GADL AL  EA ++ LR
Sbjct: 657 --LADDVDLVQLAKMTEGYSGADLEALVREAVMLALR 691


>gi|399577393|ref|ZP_10771146.1| ATPase AAA [Halogranum salarium B-1]
 gi|399237776|gb|EJN58707.1| ATPase AAA [Halogranum salarium B-1]
          Length = 741

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 150/282 (53%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K ++ E++EWP   +E F R+G  P
Sbjct: 436  DFNGALGEVEPSAMREVLVELPKMSWDDVGGLEDAKQRVKESIEWPLTSREKFSRMGIEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETKANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P IIFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL +R  V VI ATNRPD IDP
Sbjct: 556  PCIIFFDELDSLAPSRGQEM-GNNVSERVVNQLLTELDGLEERGEVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P E  RE+I  IH   +P + DV++RE+A ++EG  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMIGSPGEEGREQILDIHTEGMPLAPDVSLREIAEITEGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ DA  + M+H + A+  V+P+   ++ SY E
Sbjct: 675  REAAIEALREDSDAQEVEMRHFRKAMESVRPTISEDLLSYYE 716



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  ++YL+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQVHTRGMPLS-DDVSLDYLADETHGFVGADIESLSKEAAMKALRRY 411



 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ISYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI ++H R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQVHTRGMPLSDDVSLDYLADETHGFVGADIESLSKEAAMKALRRYL 412



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 129/220 (58%), Gaps = 16/220 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           +   S +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+
Sbjct: 485 REKFSRMGIEPPAGVLLYGPPGTGKTLMAKAVANETKANFISVRGPQLLSKWVGESEKAI 544

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            + F  A Q +P ++F DELD++AP+R ++ G  +S+R+V  LL  +DG+     V+VI 
Sbjct: 545 RQTFRKARQVSPCIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDGLEERGEVMVIG 604

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL R GR DR + I                P    R +IL     GM  +
Sbjct: 605 ATNRPDMIDPALIRSGRFDRLVMI--------------GSPGEEGREQILDIHTEGMPLA 650

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
             D  +  ++  T G+VG+DL ++  EAA+  LR  S  Q
Sbjct: 651 -PDVSLREIAEITEGYVGSDLESIAREAAIEALREDSDAQ 689


>gi|194761322|ref|XP_001962878.1| GF15657 [Drosophila ananassae]
 gi|190616575|gb|EDV32099.1| GF15657 [Drosophila ananassae]
          Length = 796

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 144/279 (51%), Positives = 204/279 (73%), Gaps = 7/279 (2%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L+L   + A  +++PSAMREV++E P V+W D+GGQ E++  + +A+EWP  H E F+R+
Sbjct: 505  LQLQHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHAEKFQRL 564

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP GILMFGPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR +F +A
Sbjct: 565  GIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRRA 624

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDG----VSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
            R  AP+I+FFDEID   AI G+ +DG     SV +RV++QLL E+DG+    NVT++AAT
Sbjct: 625  RQVAPAIVFFDEID---AIGGERADGDSGSSSVKERVLTQLLTEMDGVEALQNVTIVAAT 681

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD ID ALLRPGR DR+LYVG P    R EI +I LR +P +  V++ +L  L++G +
Sbjct: 682  NRPDMIDKALLRPGRIDRILYVGLPKAEARREILKIKLRAMPLADGVDMEKLVQLTDGYS 741

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            GA+I  +C EAA+ A+E++ +A  +     + A++ V P
Sbjct: 742  GAEIQAVCHEAALRALEQSFEAEHVQWADFEHALKAVPP 780



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/272 (36%), Positives = 144/272 (52%), Gaps = 27/272 (9%)

Query: 380 LNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKS-TLSS 438
           L A    ++   +    IE  NVQ       S +GG S+    ++  I    + +     
Sbjct: 510 LQAALTRIKPSAMREVLIECPNVQW------SDIGGQSELRLAMQQAIEWPLLHAEKFQR 563

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF  
Sbjct: 564 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRR 623

Query: 499 ASQSAPAVVFIDELDAIAPARKD---GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q APA+VF DE+DAI   R D   G   + +R++  LL  MDGV     V ++AATNR
Sbjct: 624 ARQVAPAIVFFDEIDAIGGERADGDSGSSSVKERVLTQLLTEMDGVEALQNVTIVAATNR 683

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+ AL RPGR+DR + +               +P    R EIL   L  M   L D 
Sbjct: 684 PDMIDKALLRPGRIDRILYV--------------GLPKAEARREILKIKLRAM--PLADG 727

Query: 616 -EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            ++E L   T G+ GA++ A+C+EAAL  L +
Sbjct: 728 VDMEKLVQLTDGYSGAEIQAVCHEAALRALEQ 759



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 131/245 (53%), Gaps = 32/245 (13%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT-------SLARL 463
           S++GGL +   ++++ +  +     L + GL+ ++G+LL+G  G GK+       S+A  
Sbjct: 272 SQIGGLDRHLQLVEESMEYALGFRKLPA-GLKVSRGMLLYGATGCGKSMILEAMSSVAEE 330

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP--AVVFIDELDAIAPARKD 521
            +H   + L  +N  EV S+  GE+E+ L E+F+ A    P   ++ I+++  + P  K 
Sbjct: 331 RSHGH-IKLIPINSCEVYSKFLGETEKRLAEIFELAYNHYPHPTLLLIEDIHNLCP--KQ 387

Query: 522 GGEELSQRMVATLLNLMDGV-----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
              +L +R+  + L+L+D +      +     V+A +++ +++ P++RR GRLD E+E+ 
Sbjct: 388 EPTDLVKRVSLSFLSLLDQLNSPRNLKGSKTFVLATSSQIEALHPSIRRAGRLDSEVEL- 446

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                          PSP  R +I+  L S +++ L + ++E+++  THG+VGADLA L 
Sbjct: 447 -------------GAPSPTARKDIIKCLTSSVQNILGEEDLEHMASITHGYVGADLANLV 493

Query: 637 NEAAL 641
               L
Sbjct: 494 YAGML 498



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 126/249 (50%), Gaps = 25/249 (10%)

Query: 788  MEAVEWPQKHQEAFKRI--GTRPPTGILMFGPPGCSKTLMARAVASEA------GLNFLA 839
            ++ VE   ++   F+++  G +   G+L++G  GC K+++  A++S A       +  + 
Sbjct: 281  LQLVEESMEYALGFRKLPAGLKVSRGMLLYGATGCGKSMILEAMSSVAEERSHGHIKLIP 340

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARANAP--SIIFFDEIDGLAAIRGKESDGVSVSDRV 897
            +   E++SK++GE+EK +  +F  A  + P  +++  ++I  L      + +   +  RV
Sbjct: 341  INSCEVYSKFLGETEKRLAEIFELAYNHYPHPTLLLIEDIHNLCP----KQEPTDLVKRV 396

Query: 898  MSQLLVELDGLHQRVNVT-----VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
                L  LD L+   N+      V+A +++ + + P++ R GR D  + +G P+ T R++
Sbjct: 397  SLSFLSLLDQLNSPRNLKGSKTFVLATSSQIEALHPSIRRAGRLDSEVELGAPSPTARKD 456

Query: 953  IFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            I +     +     + ++  +A ++ G  GAD++ +     ++A       + + +QHL+
Sbjct: 457  IIKCLTSSVQNILGEEDLEHMASITHGYVGADLANLVYAGMLNA-----HPNPLQLQHLQ 511

Query: 1012 TAIRHVQPS 1020
             A+  ++PS
Sbjct: 512  AALTRIKPS 520


>gi|448309662|ref|ZP_21499519.1| ATPase AAA [Natronorubrum bangense JCM 10635]
 gi|445589786|gb|ELY44012.1| ATPase AAA [Natronorubrum bangense JCM 10635]
          Length = 742

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 208/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLHDAKEQVQESVEWPLNNPERFSRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGEV-GSNVSERVVNQLLTELDGLEEMENVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH  + P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDIDGRERILNIHTEETPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+++  +F+
Sbjct: 675  REAAIEALREDHEADIVEMRHFRKAMENVRPTITDDILEYYEQIEEEFK 723



 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 162/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G   P G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEQPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  Q  + A+  V+PS
Sbjct: 424  PSLIDRMIVKRQDFRGALNEVEPS 447



 Score =  209 bits (533), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+   +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQGEIQRVREMVELPMKHPQIFKKLGIEQPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVNLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 127/215 (59%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FSRLGVDPPSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGEVGSNVSERVVNQLLTELDGLEEMENVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL+      E + 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDIDGRERILNI---HTEETP 648

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           L ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 649 LAADVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|448336759|ref|ZP_21525850.1| AAA family ATPase, CDC48 subfamily protein [Natrinema pallidum DSM
            3751]
 gi|448345912|ref|ZP_21534801.1| AAA family ATPase, CDC48 subfamily protein [Natrinema altunense JCM
            12890]
 gi|445627850|gb|ELY81165.1| AAA family ATPase, CDC48 subfamily protein [Natrinema pallidum DSM
            3751]
 gi|445633845|gb|ELY87032.1| AAA family ATPase, CDC48 subfamily protein [Natrinema altunense JCM
            12890]
          Length = 742

 Score =  315 bits (808), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 207/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG ++ K Q+ E+VEWP    E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLQDAKDQVQESVEWPLSSPERFDRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH    P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVDGRERILEIHTENTPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+++  +FQ
Sbjct: 675  REAAIEALREDEEADIVEMRHFRQAMENVRPTITDDILDYYEQIEEEFQ 723



 Score =  223 bits (567), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVSLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  213 bits (541), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVSLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 132/229 (57%), Gaps = 30/229 (13%)

Query: 428 ISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
           +  SV+  LSS      LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++
Sbjct: 474 VQESVEWPLSSPERFDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLL 533

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLM 538
           S+  GESE+A+ + F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +
Sbjct: 534 SKWVGESEKAIRQTFRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTEL 591

Query: 539 DGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRL 598
           DG+     V+VI ATNRPD I+PAL R GR DR + I                P    R 
Sbjct: 592 DGLEEMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI--------------GEPDVDGRE 637

Query: 599 EILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            IL       E++ L ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 638 RILEI---HTENTPLAADVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|170289821|ref|YP_001736637.1| AAA ATPase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173901|gb|ACB06954.1| AAA family ATPase, CDC48 subfamily [Candidatus Korarchaeum
            cryptofilum OPF8]
          Length = 742

 Score =  315 bits (808), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 155/308 (50%), Positives = 217/308 (70%), Gaps = 4/308 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V+PSA+RE+ +E+P V W+DVGG  +VK +L E +E P K+ +AF+
Sbjct: 434  LKVTNEDFFEALKLVQPSALREISIEIPNVTWDDVGGLEDVKRELREVIELPLKNPDAFR 493

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP G+L++GPPGC KTL+A+AVA+E+  NF++VKGPEL SKWVGESEKAVR +F 
Sbjct: 494  RMGIDPPRGVLLYGPPGCGKTLIAKAVANESEANFISVKGPELLSKWVGESEKAVRMIFR 553

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR   P+I+F DEID L   RG  +D   VS+RV+SQ+L E+DG+H   +V VI ATNR
Sbjct: 554  KARQVTPAIVFIDEIDSLFPKRGVHADS-GVSERVVSQMLTEIDGIHPLRDVVVIGATNR 612

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGR +RL+YVGPP+   R +I ++  RK+P + DV++R +A ++E  +GA
Sbjct: 613  PDLIDPALLRPGRLERLVYVGPPDFQSRYQILKVLTRKVPLAKDVDLRSIALMTERYSGA 672

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKELSAKFQRLVHSN 1039
            D++ + REAA++A+ E+++A R+  +H + A+  V+PS   EI  Y E   K  R V   
Sbjct: 673  DLAALVREAAMAALREDINAERVEPRHFEIAMSRVKPSLTDEILKYFEEIKKTLRAVTIP 732

Query: 1040 AEADESGY 1047
             E  E  Y
Sbjct: 733  EERKEETY 740



 Score =  236 bits (602), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 122/284 (42%), Positives = 182/284 (64%), Gaps = 17/284 (5%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            ++VR S +    + +P + +ED+GG RE   ++ E VE P +H E F+ +G  PP G+L+
Sbjct: 173  IEVRESPVELARVVLPTITYEDIGGLREEIQRIREMVELPLRHPELFRHLGIDPPKGVLL 232

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+A+AVA+E+  +F+++ GPE+ SK+ GESEK +R +F +A  NAPSIIF 
Sbjct: 233  YGPPGTGKTLLAKAVANESNAHFISISGPEIMSKYYGESEKRLREIFEEAEKNAPSIIFI 292

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DE+D +A  R + +    V  RV++QLL  +DGL  R  V VI ATNRP+ IDPAL RPG
Sbjct: 293  DELDSIAPNRNEVTG--EVERRVVAQLLALMDGLKGRGEVIVIGATNRPEAIDPALRRPG 350

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + +G P+   R+EI  IH R +P + DV++  LA ++ G  GAD++ + REAA++
Sbjct: 351  RFDREIEIGVPDREGRKEILLIHTRNMPLADDVDLDRLADITHGFVGADLAALVREAAMA 410

Query: 995  AIEE-----NLDASRITMQHLK----------TAIRHVQPSEIH 1023
            A+       +LDA  I ++ L+           A++ VQPS + 
Sbjct: 411  ALRRVLPKIDLDAESIPLEVLEELKVTNEDFFEALKLVQPSALR 454



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 154/236 (65%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   +++++ +          LG+ P KGVLL+GPPGTGKT LA+  A++S  +
Sbjct: 195 IGGLREEIQRIREMVELPLRHPELFRHLGIDPPKGVLLYGPPGTGKTLLAKAVANESNAH 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE+ L E+F+ A ++AP+++FIDELD+IAP R +   E+ +R+V
Sbjct: 255 FISISGPEIMSKYYGESEKRLREIFEEAEKNAPSIIFIDELDSIAPNRNEVTGEVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNRP++I+PALRRPGR DREIEI               V
Sbjct: 315 AQLLALMDGLKGRGEVIVIGATNRPEAIDPALRRPGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL  L+      L D  +++ L+  THGFVGADLAAL  EAA+  LRR
Sbjct: 361 PDREGRKEIL--LIHTRNMPLADDVDLDRLADITHGFVGADLAALVREAAMAALRR 414



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 138/237 (58%), Gaps = 21/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L+++I +          +G+ P +GVLL+GPPG GKT +A+  A++S  N
Sbjct: 468 VGGLEDVKRELREVIELPLKNPDAFRRMGIDPPRGVLLYGPPGCGKTLIAKAVANESEAN 527

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQ 528
             +V GPE++S+  GESE+A+  +F  A Q  PA+VFIDE+D++ P R    D G  +S+
Sbjct: 528 FISVKGPELLSKWVGESEKAVRMIFRKARQVTPAIVFIDEIDSLFPKRGVHADSG--VSE 585

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V+ +L  +DG+     V+VI ATNRPD I+PAL RPGRL+R           L+   P
Sbjct: 586 RVVSQMLTEIDGIHPLRDVVVIGATNRPDLIDPALLRPGRLER-----------LVYVGP 634

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              P    R +IL  L   +  +  D ++  +++ T  + GADLAAL  EAA+  LR
Sbjct: 635 ---PDFQSRYQILKVLTRKVPLA-KDVDLRSIALMTERYSGADLAALVREAAMAALR 687


>gi|195351109|ref|XP_002042079.1| GM26020 [Drosophila sechellia]
 gi|194123903|gb|EDW45946.1| GM26020 [Drosophila sechellia]
          Length = 799

 Score =  315 bits (808), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 146/278 (52%), Positives = 203/278 (73%), Gaps = 3/278 (1%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L++   + A  +++PSAMREV++E P V+W D+GGQ E++  + +A+EWP  H E F+R+
Sbjct: 505  LQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHAEKFQRL 564

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP GILMFGPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR +F KA
Sbjct: 565  GIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKA 624

Query: 865  RANAPSIIFFDEIDGLAAIR---GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            R  AP+I+FFDEID +   R      S G SV +RV++QLL ELDG+    NVT++AATN
Sbjct: 625  RQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATN 684

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR+LYVG P    R EI +I LR +P S+DV++ +L  L+EG +G
Sbjct: 685  RPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSG 744

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            A+I  +C EAA+ A+E++ +A  +     + A++ V P
Sbjct: 745  AEIQAVCHEAALRALEQSFEAEDVKWTDFEHALKAVPP 782



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 144/275 (52%), Gaps = 27/275 (9%)

Query: 378 PPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKS-TL 436
           P L A    ++   +    IE  NVQ       S +GG S+    ++  I    + +   
Sbjct: 508 PHLQAALTRIKPSAMREVLIECPNVQ------WSDIGGQSELRLAMQQAIEWPLLHAEKF 561

Query: 437 SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
             LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF
Sbjct: 562 QRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVF 621

Query: 497 DSASQSAPAVVFIDELDAIAPAR-----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
             A Q APA+VF DE+DAI   R        G  + +R++  LL  +DGV     V ++A
Sbjct: 622 RKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVA 681

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+ AL RPGR+DR + +               +P    R EIL   L  M  S
Sbjct: 682 ATNRPDMIDKALLRPGRIDRILYV--------------GLPQCEARREILKIKLRAMPIS 727

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             D ++E L   T G+ GA++ A+C+EAAL  L +
Sbjct: 728 -NDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQ 761



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 131/244 (53%), Gaps = 30/244 (12%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTS-LARLCA---- 465
           S++GGL ++  ++++ +  +    TL + GLR ++G+LL+G  G GK+  L  +CA    
Sbjct: 272 SQIGGLDRQLQLVEESMEYALGFRTLPA-GLRVSRGLLLYGATGCGKSMVLEAMCAVAEE 330

Query: 466 -HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS--APAVVFIDELDAIAPARKDG 522
                V L  +N  EV S+  GE+EQ L  +F+ A      P ++ I+++  + P  K  
Sbjct: 331 RSQGHVQLVRINSGEVYSKFLGETEQKLGAIFERAYNHYPQPTLLLIEDVHNLCP--KQE 388

Query: 523 GEELSQRMVATLLNLMDGV-----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
             +L +R+    L+L+D +      +     V+A +++ D++ P++RR GRLD E+E+  
Sbjct: 389 SSDLVKRVSLAFLSLLDQLSTPSQLKGSKTFVLATSSQIDALHPSIRRAGRLDNEVEL-- 446

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                         PS   R+EIL  L+  +EH L D EVE+++  THG+VGADL+ L  
Sbjct: 447 ------------GAPSSQGRMEILRCLIQSVEHQLSDEEVEHVASITHGYVGADLSNLVY 494

Query: 638 EAAL 641
            A L
Sbjct: 495 AAML 498



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 125/249 (50%), Gaps = 25/249 (10%)

Query: 788  MEAVEWPQKHQEAFKRI--GTRPPTGILMFGPPGCSKTLMARAVA------SEAGLNFLA 839
            ++ VE   ++   F+ +  G R   G+L++G  GC K+++  A+       S+  +  + 
Sbjct: 281  LQLVEESMEYALGFRTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLVR 340

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARAN--APSIIFFDEIDGLAAIRGKESDGVSVSDRV 897
            +   E++SK++GE+E+ + ++F +A  +   P+++  +++  L   + + SD V    RV
Sbjct: 341  INSGEVYSKFLGETEQKLGAIFERAYNHYPQPTLLLIEDVHNLCP-KQESSDLVK---RV 396

Query: 898  MSQLLVELDGLHQRVNVT-----VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
                L  LD L     +      V+A +++ D + P++ R GR D  + +G P+   R E
Sbjct: 397  SLAFLSLLDQLSTPSQLKGSKTFVLATSSQIDALHPSIRRAGRLDNEVELGAPSSQGRME 456

Query: 953  IFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            I R  ++ +    SD  +  +A ++ G  GAD+S +   A + A       + + M HL+
Sbjct: 457  ILRCLIQSVEHQLSDEEVEHVASITHGYVGADLSNLVYAAMLQA-----QPNPLQMPHLQ 511

Query: 1012 TAIRHVQPS 1020
             A+  ++PS
Sbjct: 512  AALTRIKPS 520


>gi|429193621|ref|YP_007179299.1| AAA ATPase [Natronobacterium gregoryi SP2]
 gi|448326640|ref|ZP_21515988.1| ATPase AAA [Natronobacterium gregoryi SP2]
 gi|429137839|gb|AFZ74850.1| AAA family ATPase, CDC48 subfamily [Natronobacterium gregoryi SP2]
 gi|445610829|gb|ELY64597.1| ATPase AAA [Natronobacterium gregoryi SP2]
          Length = 743

 Score =  315 bits (807), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 150/289 (51%), Positives = 205/289 (70%), Gaps = 4/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLHEAKDQVKESVEWPLSNPERFDRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG    G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 615

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH    P ++DV ++E+A +++G  G+D+  I 
Sbjct: 616  ALLRSGRFDRLVMIGEPDIDGRERILEIHTENTPLAADVTLKEIAEITDGYVGSDLESIA 675

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE-LSAKFQ 1033
            REAAI A+ E+ +A+ + M H + A+ +V+P+   EI  Y E +  +FQ
Sbjct: 676  REAAIEALREDKEANVVEMSHFRQAMENVRPTITDEILDYYERIEEEFQ 724



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVNLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 21/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FDRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG--GEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q +P V+F DELDA+AP R  G  G  +S+R+V  LL  +DG+   + V+VI AT
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEEMEDVMVIGAT 607

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+PAL R GR DR + I                P    R  IL       E++ L
Sbjct: 608 NRPDMIDPALLRSGRFDRLVMI--------------GEPDIDGRERILEI---HTENTPL 650

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 651 AADVTLKEIAEITDGYVGSDLESIAREAAIEALR 684


>gi|300710268|ref|YP_003736082.1| AAA family ATPase [Halalkalicoccus jeotgali B3]
 gi|448294593|ref|ZP_21484672.1| AAA family ATPase [Halalkalicoccus jeotgali B3]
 gi|299123951|gb|ADJ14290.1| AAA family ATPase, CDC48 subfamily protein [Halalkalicoccus jeotgali
            B3]
 gi|445586270|gb|ELY40552.1| AAA family ATPase [Halalkalicoccus jeotgali B3]
          Length = 741

 Score =  315 bits (807), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 150/282 (53%), Positives = 205/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W DVGG  +    + E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALGEVEPSAMREVLVELPKISWNDVGGLEDAIGDIKESVEWPLTNPERFDRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++++GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISIRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  NV VIAATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPARGGEV-GSNVSERVVNQLLTELDGLEEMENVMVIAATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG P E  R+EI  IH + IP ++DV++RELA +++G  G+D++ I 
Sbjct: 615  ALIRSGRFDRLVMVGQPGEEGRKEILEIHTQDIPLAADVSLRELAEITDGFVGSDLASIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAA++A+ E+ DA  + M+H + A+  V+P+   +I  Y E
Sbjct: 675  REAAMTALREDRDADVVEMRHFRGAMESVRPTITDDILGYYE 716



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 111/239 (46%), Positives = 154/239 (64%), Gaps = 7/239 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +  P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREISIDVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDASRI 1005
            EI +IH R +P S DV++ ELA  + G  GADI  + +EAA+ A+     E NLD   +
Sbjct: 364  EILQIHTRGMPLSDDVSLSELADDTHGFVGADIESLTKEAAMRALRRYLPEINLDEEEV 422



 Score =  213 bits (541), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREI ID              V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREISID--------------V 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVSLSELADDTHGFVGADIESLTKEAAMRALRRY 411



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 127/213 (59%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  ++ GP+++S+  GESE+A+ + 
Sbjct: 488 FDRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISIRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELD++APAR  GGE    +S+R+V  LL  +DG+   + V+VIAA
Sbjct: 548 FRKARQVSPTVIFFDELDSLAPAR--GGEVGSNVSERVVNQLLTELDGLEEMENVMVIAA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + +                P    R EIL      +  + 
Sbjct: 606 TNRPDMIDPALIRSGRFDRLVMV--------------GQPGEEGRKEILEIHTQDIPLA- 650

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D  +  L+  T GFVG+DLA++  EAA+  LR
Sbjct: 651 ADVSLRELAEITDGFVGSDLASIAREAAMTALR 683


>gi|170289856|ref|YP_001736672.1| AAA ATPase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173936|gb|ACB06989.1| AAA family ATPase, CDC48 subfamily [Candidatus Korarchaeum
            cryptofilum OPF8]
          Length = 732

 Score =  315 bits (807), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 156/308 (50%), Positives = 215/308 (69%), Gaps = 17/308 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   + PSA+REV+++VP V+W+D+GG  EVK +L  AVEWP K+ E F+
Sbjct: 422  LKVTMDDFMEAFKDITPSALREVVVQVPNVRWDDIGGLDEVKEELKMAVEWPLKYPELFE 481

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G R P GIL+FGPPG  KTL+A+AVA+E+  NF++VKGPE+ SKWVGESEKA+R +F 
Sbjct: 482  ASGARQPKGILLFGPPGTGKTLLAKAVANESEANFISVKGPEIMSKWVGESEKAIRMIFR 541

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP+IIFFDEID +A IRG  SD   V++RV+SQLL E+DGL +   V VIAATNR
Sbjct: 542  RARQTAPTIIFFDEIDSIAPIRGYSSDS-GVTERVISQLLTEMDGLEELRKVVVIAATNR 600

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+YV PP+   R +I +IH +  P + DVN+ ELA  +EG TGA
Sbjct: 601  PDLIDPALLRPGRFDRLIYVPPPDFAARLQILKIHTKGKPLAPDVNLEELASKTEGYTGA 660

Query: 983  DISLICREAAISAIEENLDASR-------------ITMQHLKTAIRHVQP---SEIHSYK 1026
            D++ +   A + A++E+++  +             IT +H + A++ ++P    EI  YK
Sbjct: 661  DLANLVNIATLMALKEHINKYKDPKEASAHRSELIITKRHFEEAMKKIRPLGKEEIERYK 720

Query: 1027 ELSAKFQR 1034
             ++ +F R
Sbjct: 721  RIADEFLR 728



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 119/272 (43%), Positives = 173/272 (63%), Gaps = 18/272 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            +VP+V +ED+GG ++   ++ E VE P +H E F+ +G  PP G+L++GPPG  KTL+A+
Sbjct: 173  KVPRVTYEDIGGLKDAIQKIREMVELPLRHPELFRHLGIDPPKGVLLYGPPGTGKTLLAK 232

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+  +F+++ GPE+ SK+ GESEK +R +F +A  NAPSIIF DEID +A  R +E
Sbjct: 233  AVANESNAHFISISGPEIMSKYYGESEKRLREIFEEAEKNAPSIIFMDEIDAIAPKR-EE 291

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G  V  RV++QLL  +DGL  R  V VI ATNRP+ IDPAL RPGRFDR + +G P+ 
Sbjct: 292  VTG-EVERRVVAQLLALMDGLKGRGEVIVIGATNRPEAIDPALRRPGRFDREIEIGVPDR 350

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI  IH R +P + DV++  LA ++ G  GAD++ + REAA+ A+           
Sbjct: 351  EGRKEILLIHTRNMPLADDVDLDRLADITHGFVGADLAALVREAAMRALRRLMKEVNLLE 410

Query: 998  ------ENLDASRITMQHLKTAIRHVQPSEIH 1023
                  E L+  ++TM     A + + PS + 
Sbjct: 411  SEKLPPEVLEKLKVTMDDFMEAFKDITPSALR 442



 Score =  202 bits (514), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 113/263 (42%), Positives = 163/263 (61%), Gaps = 23/263 (8%)

Query: 394 NAQIEFQNVQATVEQDISK-----LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGV 447
           + +IE      T E+ + +     +GGL      +++++ +          LG+ P KGV
Sbjct: 158 DTEIEISEKPVTEERKVPRVTYEDIGGLKDAIQKIREMVELPLRHPELFRHLGIDPPKGV 217

Query: 448 LLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVV 507
           LL+GPPGTGKT LA+  A++S  +  +++GPE++S+ YGESE+ L E+F+ A ++AP+++
Sbjct: 218 LLYGPPGTGKTLLAKAVANESNAHFISISGPEIMSKYYGESEKRLREIFEEAEKNAPSII 277

Query: 508 FIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPG 567
           F+DE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNRP++I+PALRRPG
Sbjct: 278 FMDEIDAIAPKREEVTGEVERRVVAQLLALMDGLKGRGEVIVIGATNRPEAIDPALRRPG 337

Query: 568 RLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHG 626
           R DREIEI               VP    R EIL  L+      L D  +++ L+  THG
Sbjct: 338 RFDREIEI--------------GVPDREGRKEIL--LIHTRNMPLADDVDLDRLADITHG 381

Query: 627 FVGADLAALCNEAALVCLRRYSK 649
           FVGADLAAL  EAA+  LRR  K
Sbjct: 382 FVGADLAALVREAAMRALRRLMK 404



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 128/213 (60%), Gaps = 24/213 (11%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G R  KG+LL GPPGTGKT LA+  A++S  N  +V GPE++S+  GESE+A+  +F  A
Sbjct: 484 GARQPKGILLFGPPGTGKTLLAKAVANESEANFISVKGPEIMSKWVGESEKAIRMIFRRA 543

Query: 500 SQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
            Q+AP ++F DE+D+IAP R    D G  +++R+++ LL  MDG+     V+VIAATNRP
Sbjct: 544 RQTAPTIIFFDEIDSIAPIRGYSSDSG--VTERVISQLLTEMDGLEELRKVVVIAATNRP 601

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGMEHSLLD 614
           D I+PAL RPGR DR I                 VP P  A RL+IL     G   +  D
Sbjct: 602 DLIDPALLRPGRFDRLI----------------YVPPPDFAARLQILKIHTKGKPLA-PD 644

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
             +E L+  T G+ GADLA L N A L+ L+ +
Sbjct: 645 VNLEELASKTEGYTGADLANLVNIATLMALKEH 677


>gi|448323197|ref|ZP_21512661.1| ATPase AAA [Natronococcus amylolyticus DSM 10524]
 gi|445600383|gb|ELY54396.1| ATPase AAA [Natronococcus amylolyticus DSM 10524]
          Length = 742

 Score =  315 bits (807), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 210/289 (72%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG ++ + Q+ E+VEWP  + + F+R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLQDAQEQVQESVEWPLNNPDRFERLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMENVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DVN++E+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDIEGRERILDIHTQGTPLAADVNLQEIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+ +  +FQ
Sbjct: 675  REAAIEALREDHEADTVEMRHFRQAMENVRPTITDDILDYYERIEEEFQ 723



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG ++   ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQDEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  +A  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVDLAHMADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  Q  + A+  V+PS
Sbjct: 424  PSLIDRMIVKRQDFRGALNEVEPS 447



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 154/236 (65%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQDEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D ++ +++  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVDLAHMADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/220 (40%), Positives = 126/220 (57%), Gaps = 20/220 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FERLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEEMENVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL     G   + 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDIEGRERILDIHTQGTPLA- 650

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQT 652
            D  ++ ++  T G+VG+DL ++  EAA+  LR   +  T
Sbjct: 651 ADVNLQEIAEITDGYVGSDLESIAREAAIEALREDHEADT 690


>gi|448669813|ref|ZP_21686669.1| cell division control protein 48 [Haloarcula amylolytica JCM 13557]
 gi|445766926|gb|EMA18036.1| cell division control protein 48 [Haloarcula amylolytica JCM 13557]
          Length = 741

 Score =  315 bits (807), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 153/282 (54%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W++VGG    K Q+ EAVEWP    E F+R+G  P
Sbjct: 436  DFKGALNEVSPSAMREVLVELPKMSWDNVGGLSGPKEQVQEAVEWPMNSPEKFERMGVTP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPGRGGEM-GSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P+   RE+I +IH    P S DV++RELA +S+G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMIGEPDVEGREQILKIHTDDTPLSPDVSLRELAEVSDGFVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ DA  + M+H + A+  V+P+   +I  Y E
Sbjct: 675  REAAIEALREDDDAEEVEMRHFRQAMDSVRPTITDDIREYYE 716



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 162/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+ +LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLAKLATDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   I     K A+  V PS
Sbjct: 424  PSLIDRMIIKRDDFKGALNEVSPS 447



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVNLAKLATDTHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 123/213 (57%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FERMGVTPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q AP ++F DELD++AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVAPTIIFFDELDSLAPGR--GGEMGSNVSERVVNQLLTELDGLEEMEDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R +IL         S 
Sbjct: 606 TNRPDMIDPALIRSGRFDRLVMI--------------GEPDVEGREQILKIHTDDTPLS- 650

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D  +  L+  + GFVG+DL ++  EAA+  LR
Sbjct: 651 PDVSLRELAEVSDGFVGSDLESIAREAAIEALR 683


>gi|386002124|ref|YP_005920423.1| AAA ATPase [Methanosaeta harundinacea 6Ac]
 gi|357210180|gb|AET64800.1| AAA family ATPase, CDC48 subfamily [Methanosaeta harundinacea 6Ac]
          Length = 736

 Score =  315 bits (807), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 154/308 (50%), Positives = 213/308 (69%), Gaps = 8/308 (2%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  ++ PSAMREV +E+  V W DVGG   V+ +++E+VEWP +    F+ +G RP
Sbjct: 435  DFDDALKEIEPSAMREVFVEISDVTWRDVGGMGPVRQEIVESVEWPLRRPAKFEEMGIRP 494

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+ARAVA E   NF++VKGP+L SKWVGESEKAVR +F KAR  +
Sbjct: 495  PRGVLLYGPPGTGKTLIARAVARETKANFISVKGPQLLSKWVGESEKAVREVFKKARQVS 554

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D +A +RG E +G   S+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 555  PAIIFFDELDAIAPMRGME-EGPRTSERVVNQLLAELDGLETLKDVVVIGATNRPDIIDP 613

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRLL+VGPP+   R EI RIH +K P   DV++ ELA L+E   G+D+  +C
Sbjct: 614  ALLRSGRFDRLLFVGPPDRAGRLEILRIHTKKTPNGDDVSLEELAELTESFVGSDLESLC 673

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQ 1048
            REA + A+ E+ +AS + M+H + A++ V+P    S++E   ++   ++   E    G +
Sbjct: 674  REAVMLALREDPEASEVEMRHYREALKRVRP----SFEENMGRYYERIN---ERFRGGVK 726

Query: 1049 LRPSKSIG 1056
            + PS  +G
Sbjct: 727  VDPSSYLG 734



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 114/263 (43%), Positives = 164/263 (62%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +EDVGG R+   ++ E +E P KH E F R+G  PP G+L+ G PG  KTL+A+A+A+
Sbjct: 186  IAYEDVGGLRKEVQRIREMIELPMKHPEVFNRLGIEPPKGVLLHGSPGTGKTLIAKALAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF ++ GPE+ SK+ GESE+ +R +F +A  + PSIIF DE+D +A  RG+ +   
Sbjct: 246  ETNANFFSIAGPEVMSKYYGESEQRLREIFEEANRSTPSIIFIDELDSIAPKRGEVTG-- 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R  V VI ATNR D IDPAL RPGRFDR + +G P+  DR 
Sbjct: 304  EVERRVVAQLLAMMDGLKERGQVVVIGATNRIDAIDPALRRPGRFDREIEIGVPDRVDRL 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI +IH+R +P    V++ +LA  + G  GADIS +C+EAA+  +              E
Sbjct: 364  EILQIHVRNMPIDGSVSLEDLADRTNGFVGADISALCKEAAMKVLRRHLPEISFDDDIPE 423

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E L+   +T      A++ ++PS
Sbjct: 424  EVLEEMSVTADDFDDALKEIEPS 446



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/238 (47%), Positives = 155/238 (65%), Gaps = 20/238 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +        + LG+ P KGVLLHG PGTGKT +A+  A+++  N
Sbjct: 191 VGGLRKEVQRIREMIELPMKHPEVFNRLGIEPPKGVLLHGSPGTGKTLIAKALANETNAN 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPEV+S+ YGESEQ L E+F+ A++S P+++FIDELD+IAP R +   E+ +R+V
Sbjct: 251 FFSIAGPEVMSKYYGESEQRLREIFEEANRSTPSIIFIDELDSIAPKRGEVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR D+I+PALRRPGR DREIEI               V
Sbjct: 311 AQLLAMMDGLKERGQVVVIGATNRIDAIDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    RLEIL   +  M    +D  V  E L+  T+GFVGAD++ALC EAA+  LRR+
Sbjct: 357 PDRVDRLEILQIHVRNMP---IDGSVSLEDLADRTNGFVGADISALCKEAAMKVLRRH 411



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/255 (40%), Positives = 145/255 (56%), Gaps = 19/255 (7%)

Query: 393 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A  E F  +     +D+  +G + +E  I++ +       +    +G+RP +GVLL+G
Sbjct: 445 PSAMREVFVEISDVTWRDVGGMGPVRQE--IVESVEWPLRRPAKFEEMGIRPPRGVLLYG 502

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT +AR  A ++  N  +V GP+++S+  GESE+A+ EVF  A Q +PA++F DE
Sbjct: 503 PPGTGKTLIARAVARETKANFISVKGPQLLSKWVGESEKAVREVFKKARQVSPAIIFFDE 562

Query: 512 LDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLD 570
           LDAIAP R  + G   S+R+V  LL  +DG+     V+VI ATNRPD I+PAL R GR D
Sbjct: 563 LDAIAPMRGMEEGPRTSERVVNQLLAELDGLETLKDVVVIGATNRPDIIDPALLRSGRFD 622

Query: 571 REIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGA 630
           R        LF          P  A RLEIL        +   D  +E L+  T  FVG+
Sbjct: 623 R-------LLF-------VGPPDRAGRLEILRIHTKKTPNG-DDVSLEELAELTESFVGS 667

Query: 631 DLAALCNEAALVCLR 645
           DL +LC EA ++ LR
Sbjct: 668 DLESLCREAVMLALR 682


>gi|333986808|ref|YP_004519415.1| AAA family ATPase [Methanobacterium sp. SWAN-1]
 gi|333824952|gb|AEG17614.1| AAA family ATPase, CDC48 subfamily [Methanobacterium sp. SWAN-1]
          Length = 729

 Score =  315 bits (807), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 140/273 (51%), Positives = 201/273 (73%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A  +++PSA+RE+ ++VP VKW+D+GG    K +L EAVEWP K+ E F++ G +P
Sbjct: 449  DFKEALKEIQPSALREIFVQVPNVKWDDIGGLEGAKQELREAVEWPLKYPENFEKFGVKP 508

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+E+  NF+A+KGPEL SKWVGESEK VR +F KAR  A
Sbjct: 509  PKGVLVYGPPGTGKTLLAKAVANESEANFIAIKGPELLSKWVGESEKGVREVFKKARQTA 568

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A+ RG  S    V+ RV++QLL E+DGL +  +V V+AATNR D IDP
Sbjct: 569  PTVIFFDEIDSIASTRGGSSTDSGVTQRVVNQLLTEIDGLEELQDVVVVAATNRVDIIDP 628

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDR + VG P+E  R  IF++H + +P + DV++ +LA  +EG  GADI  +C
Sbjct: 629  ALLRPGRFDRHVEVGDPDEEARIAIFKVHTKDMPLADDVDLEKLAKRTEGYVGADIEAVC 688

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSE 1021
            REA +  + +N++A ++ M+  + A+  V+P +
Sbjct: 689  REAVMLTLRDNMEADKVKMKQFRGAMDKVKPKK 721



 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/289 (41%), Positives = 175/289 (60%), Gaps = 17/289 (5%)

Query: 746  ELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIG 805
            ++ D E  R  V  S + E +  V  V +ED+GG +E   ++ E +E P K  E F+R+G
Sbjct: 175  QMTDVEVQREPVDVSKL-EGVANVVDVNYEDIGGLKEEVKKVREMIEIPLKRPELFERLG 233

Query: 806  TRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR 865
              PP G+LM GPPG  KTL+A+AVA+E+  +F+A+ GPE+ SK+VG SE+ +R LF +A 
Sbjct: 234  ISPPKGVLMHGPPGTGKTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLRELFEEAE 293

Query: 866  ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDK 925
             NAPSIIF DEID +A  R +E  G  V  R ++QLL  +DGL  R  V VI ATNRPD 
Sbjct: 294  ENAPSIIFIDEIDAIAPKR-EEVTG-EVERRTVAQLLTLMDGLKGRGQVVVIGATNRPDA 351

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADIS 985
            +D A+ RPGRFDR + +G P++  R E+ +IH R +P    V++ E+A ++ G  GAD+ 
Sbjct: 352  LDQAIRRPGRFDREIEIGVPDKDGRREVLQIHTRGMPLDEKVDLDEIAEITHGFVGADLE 411

Query: 986  LICREAAISAI--------------EENLDASRITMQHLKTAIRHVQPS 1020
             +C+E+A+  +              +E L    +     K A++ +QPS
Sbjct: 412  SLCKESAMRVLRRVLPDIKGDEEIPKETLKKMIVKKSDFKEALKEIQPS 460



 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/252 (43%), Positives = 156/252 (61%), Gaps = 20/252 (7%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           + + V   V+ +   +GGL +E   ++++I I          LG+ P KGVL+HGPPGTG
Sbjct: 190 KLEGVANVVDVNYEDIGGLKEEVKKVREMIEIPLKRPELFERLGISPPKGVLMHGPPGTG 249

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A++S  +   +NGPE++S+  G SE+ L E+F+ A ++AP+++FIDE+DAIA
Sbjct: 250 KTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLRELFEEAEENAPSIIFIDEIDAIA 309

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R++   E+ +R VA LL LMDG+     V+VI ATNRPD+++ A+RRPGR DREIEI 
Sbjct: 310 PKREEVTGEVERRTVAQLLTLMDGLKGRGQVVVIGATNRPDALDQAIRRPGRFDREIEI- 368

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAA 634
                         VP    R E+L     GM    LD +V+   +A  THGFVGADL +
Sbjct: 369 -------------GVPDKDGRREVLQIHTRGMP---LDEKVDLDEIAEITHGFVGADLES 412

Query: 635 LCNEAALVCLRR 646
           LC E+A+  LRR
Sbjct: 413 LCKESAMRVLRR 424



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 126/214 (58%), Gaps = 21/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G++P KGVL++GPPGTGKT LA+  A++S  N   + GPE++S+  GESE+ + EV
Sbjct: 501 FEKFGVKPPKGVLVYGPPGTGKTLLAKAVANESEANFIAIKGPELLSKWVGESEKGVREV 560

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           F  A Q+AP V+F DE+D+IA  R     D G  ++QR+V  LL  +DG+     V+V+A
Sbjct: 561 FKKARQTAPTVIFFDEIDSIASTRGGSSTDSG--VTQRVVNQLLTEIDGLEELQDVVVVA 618

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNR D I+PAL RPGR DR +E+                P    R+ I       M  +
Sbjct: 619 ATNRVDIIDPALLRPGRFDRHVEV--------------GDPDEEARIAIFKVHTKDMPLA 664

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++E L+  T G+VGAD+ A+C EA ++ LR
Sbjct: 665 -DDVDLEKLAKRTEGYVGADIEAVCREAVMLTLR 697


>gi|448685312|ref|ZP_21693304.1| cell division control protein 48 [Haloarcula japonica DSM 6131]
 gi|445781923|gb|EMA32774.1| cell division control protein 48 [Haloarcula japonica DSM 6131]
          Length = 741

 Score =  315 bits (807), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/282 (54%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W++VGG    K Q+ EAVEWP    E F+R+G  P
Sbjct: 436  DFKGALNEVSPSAMREVLVELPKMSWDNVGGLSGPKEQVQEAVEWPMNSPEKFERMGVTP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPGRGGEM-GSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P+   RE+I +IH    P S DV++RELA +S+G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMIGEPDIEGREQILKIHTDDTPLSPDVSLRELAEVSDGFVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ DA  + M+H + A+  V+P+   +I  Y E
Sbjct: 675  REAAIEALREDDDAEEVEMRHFRQAMDSVRPTITDDIRDYYE 716



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 162/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+ +LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLAKLATDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   I     K A+  V PS
Sbjct: 424  PSLIDRMIIKRDDFKGALNEVSPS 447



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVNLAKLATDTHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 125/217 (57%), Gaps = 28/217 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FERMGVTPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q AP ++F DELD++AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVAPTIIFFDELDSLAPGR--GGEMGSNVSERVVNQLLTELDGLEEMEDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREI---EIDMSFLFSLLKNSPAAVP-SPAQRLEILHALLSGM 608
           TNRPD I+PAL R GR DR +   E D+     +LK      P SP              
Sbjct: 606 TNRPDMIDPALIRSGRFDRLVMIGEPDIEGREQILKIHTDDTPLSP-------------- 651

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                D  +  L+  + GFVG+DL ++  EAA+  LR
Sbjct: 652 -----DVSLRELAEVSDGFVGSDLESIAREAAIEALR 683


>gi|315230875|ref|YP_004071311.1| cell division protein FtsH [Thermococcus barophilus MP]
 gi|315183903|gb|ADT84088.1| cell division protein FtsH [Thermococcus barophilus MP]
          Length = 834

 Score =  315 bits (807), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 154/321 (47%), Positives = 216/321 (67%), Gaps = 18/321 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV+LEVP V WED+GG  +VK  L EAVEWP K+ +AF+
Sbjct: 513  LKVTKRDFYEALKMVEPSALREVMLEVPNVHWEDIGGLEDVKQALREAVEWPLKYPKAFQ 572

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP GIL++GPPG  KT++A+AVA+E+  NF+ ++GPE+ SKWVGESEK +R +F 
Sbjct: 573  RLGINPPKGILLYGPPGTGKTMLAKAVATESEANFIGIRGPEVLSKWVGESEKRIREIFR 632

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+++F DEID +A +RG  SD   V+DR+++QLL E+DGL +   V VIAATNR
Sbjct: 633  KARQAAPTVVFIDEIDAIAPMRG--SDVNRVTDRIINQLLTEMDGLEENSGVVVIAATNR 690

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+ V  P+E  R EI ++H R++P + DVN++ELA   EG TGA
Sbjct: 691  PDILDPALLRPGRFDRLILVPAPDEKARYEILKVHTRRVPLAEDVNLKELAKRLEGYTGA 750

Query: 983  DISLICREAAISAI----------------EENLDASRITMQHLKTAIRHVQPSEIHSYK 1026
            DI+ + REAA++A+                EE L+  +++ +  + A++ ++PS      
Sbjct: 751  DIAALVREAAMNALRRTVAKIPRELIEEQSEEFLEKLKVSRKDFEEAMKKIRPSVTKYMI 810

Query: 1027 ELSAKFQRLVHSNAEADESGY 1047
            E   +F+    +  E  E  Y
Sbjct: 811  EYYKQFEESRKAPKERKEMDY 831



 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 109/214 (50%), Positives = 149/214 (69%), Gaps = 2/214 (0%)

Query: 755 MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
           ++V P A+     +VP+V +ED+GG ++   ++ E VE P KH E F+R+G  PP G+L+
Sbjct: 190 IEVLPQAVEVREEKVPEVTYEDIGGLKDAIQKIREMVELPLKHPELFERLGIEPPKGVLL 249

Query: 815 FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
           +GPPG  KTL+A+AVA+E   +F+A+ GPE+ SK+ GESE+ +R +F +A  NAPSIIF 
Sbjct: 250 YGPPGTGKTLLAKAVANETNAHFIAINGPEIMSKFYGESEERLREVFKEAEENAPSIIFI 309

Query: 875 DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
           DEID +A  R +E  G  V  RV+SQLL  +DGL +R  V VIAATNRPD IDPAL RPG
Sbjct: 310 DEIDAIAPKR-EEVTG-EVEKRVVSQLLTLMDGLKKRGKVIVIAATNRPDAIDPALRRPG 367

Query: 935 RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN 968
           RFDR + VG P++  R+EI +IH R +P   D +
Sbjct: 368 RFDREIEVGVPDKQGRKEILQIHTRGMPLEPDYD 401



 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 166/303 (54%), Gaps = 50/303 (16%)

Query: 391 TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
            LP A ++  + V     +DI   GGL      +++++ +          LG+ P KGVL
Sbjct: 192 VLPQAVEVREEKVPEVTYEDI---GGLKDAIQKIREMVELPLKHPELFERLGIEPPKGVL 248

Query: 449 LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
           L+GPPGTGKT LA+  A+++  +   +NGPE++S+ YGESE+ L EVF  A ++AP+++F
Sbjct: 249 LYGPPGTGKTLLAKAVANETNAHFIAINGPEIMSKFYGESEERLREVFKEAEENAPSIIF 308

Query: 509 IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
           IDE+DAIAP R++   E+ +R+V+ LL LMDG+ +   V+VIAATNRPD+I+PALRRPGR
Sbjct: 309 IDEIDAIAPKREEVTGEVEKRVVSQLLTLMDGLKKRGKVIVIAATNRPDAIDPALRRPGR 368

Query: 569 LDREIEI-------------------------DMSFLFSLLKN--------------SPA 589
            DREIE+                         D   +  +LK                  
Sbjct: 369 FDREIEVGVPDKQGRKEILQIHTRGMPLEPDYDKPSVLKVLKEFLKEERFDKKKLEEIIK 428

Query: 590 AVPSPAQRLEILHALLSGME------HSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
            V       EI   L S  E        L+D  ++ L+  THGFVGADLAAL  EAA+V 
Sbjct: 429 KVEKAKDEDEIKEILKSDGEIYREVKAKLIDKMLDELAEKTHGFVGADLAALAREAAMVV 488

Query: 644 LRR 646
           LRR
Sbjct: 489 LRR 491



 Score =  174 bits (440), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 127/215 (59%), Gaps = 19/215 (8%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                LG+ P KG+LL+GPPGTGKT LA+  A +S  N   + GPEV+S+  GESE+ + 
Sbjct: 569 KAFQRLGINPPKGILLYGPPGTGKTMLAKAVATESEANFIGIRGPEVLSKWVGESEKRIR 628

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           E+F  A Q+AP VVFIDE+DAIAP R      ++ R++  LL  MDG+    GV+VIAAT
Sbjct: 629 EIFRKARQAAPTVVFIDEIDAIAPMRGSDVNRVTDRIINQLLTEMDGLEENSGVVVIAAT 688

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHS 611
           NRPD ++PAL RPGR DR I                 VP+P +  R EIL      +  +
Sbjct: 689 NRPDILDPALLRPGRFDRLI----------------LVPAPDEKARYEILKVHTRRVPLA 732

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             D  ++ L+    G+ GAD+AAL  EAA+  LRR
Sbjct: 733 -EDVNLKELAKRLEGYTGADIAALVREAAMNALRR 766


>gi|344212360|ref|YP_004796680.1| cell division control protein 48/AAA family ATPase [Haloarcula
            hispanica ATCC 33960]
 gi|343783715|gb|AEM57692.1| cell division control protein 48 / AAA family ATPase, CDC48 subfamily
            [Haloarcula hispanica ATCC 33960]
          Length = 736

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/282 (54%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W++VGG    K Q+ EAVEWP    E F+R+G  P
Sbjct: 431  DFKGALNEVSPSAMREVLVELPKMSWDNVGGLSGPKEQVQEAVEWPMNSPEKFERMGVTP 490

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 491  PSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 550

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 551  PTIIFFDELDSLAPGRGGEM-GSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 609

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P+   RE+I +IH    P S DV++RELA +S+G  G+D+  I 
Sbjct: 610  ALIRSGRFDRLVMIGEPDVEGREQILKIHTDDTPLSPDVSLRELAEVSDGFVGSDLESIA 669

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ DA  + M+H + A+  V+P+   +I  Y E
Sbjct: 670  REAAIEALREDDDAEEVEMRHFRQAMDSVRPTITDDIREYYE 711



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 162/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 181  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 240

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 241  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 298

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 299  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 358

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+ +LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 359  EILQIHTRGMPLSDDVNLAKLATDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 418

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   I     K A+  V PS
Sbjct: 419  PSLIDRMIIKRDDFKGALNEVSPS 442



 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 186 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 245

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 246 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 305

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 306 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 351

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 352 PDEVGREEILQIHTRGMPLS-DDVNLAKLATDTHGFVGADIESLTKEAAMKALRRY 406



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 123/213 (57%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 483 FERMGVTPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQT 542

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q AP ++F DELD++AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 543 FRKARQVAPTIIFFDELDSLAPGR--GGEMGSNVSERVVNQLLTELDGLEEMEDVMVIGA 600

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R +IL         S 
Sbjct: 601 TNRPDMIDPALIRSGRFDRLVMI--------------GEPDVEGREQILKIHTDDTPLS- 645

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D  +  L+  + GFVG+DL ++  EAA+  LR
Sbjct: 646 PDVSLRELAEVSDGFVGSDLESIAREAAIEALR 678


>gi|448681514|ref|ZP_21691605.1| cell division control protein 48 [Haloarcula argentinensis DSM 12282]
 gi|445767384|gb|EMA18487.1| cell division control protein 48 [Haloarcula argentinensis DSM 12282]
          Length = 741

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/282 (54%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W++VGG    K Q+ EAVEWP    E F+R+G  P
Sbjct: 436  DFKGALNEVSPSAMREVLVELPKMSWDNVGGLSGPKEQVQEAVEWPMNSPEKFERMGVTP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPGRGGEM-GSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P+   RE+I +IH    P S DV++RELA +S+G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMIGEPDIEGREQILKIHTDDTPLSPDVSLRELAEVSDGFVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ DA  + M+H + A+  V+P+   +I  Y E
Sbjct: 675  REAAIEALREDDDAEEVEMRHFRQAMDSVRPTITDDIREYYE 716



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 162/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+ +LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLAKLATDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   I     K A+  V PS
Sbjct: 424  PSLIDRMIIKRDDFKGALNEVSPS 447



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVNLAKLATDTHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 125/217 (57%), Gaps = 28/217 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FERMGVTPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q AP ++F DELD++AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVAPTIIFFDELDSLAPGR--GGEMGSNVSERVVNQLLTELDGLEEMEDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREI---EIDMSFLFSLLKNSPAAVP-SPAQRLEILHALLSGM 608
           TNRPD I+PAL R GR DR +   E D+     +LK      P SP              
Sbjct: 606 TNRPDMIDPALIRSGRFDRLVMIGEPDIEGREQILKIHTDDTPLSP-------------- 651

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                D  +  L+  + GFVG+DL ++  EAA+  LR
Sbjct: 652 -----DVSLRELAEVSDGFVGSDLESIAREAAIEALR 683


>gi|14521559|ref|NP_127035.1| cell division control protein [Pyrococcus abyssi GE5]
 gi|5458778|emb|CAB50265.1| ATPase of the AAA+ family [Pyrococcus abyssi GE5]
 gi|380742169|tpe|CCE70803.1| TPA: cell division control protein [Pyrococcus abyssi GE5]
          Length = 840

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/307 (49%), Positives = 213/307 (69%), Gaps = 17/307 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++EVP V W+D+GG  +VK +L EAVEWP K+ +AFK
Sbjct: 515  LKVTKADFYEALKMVEPSALREVLIEVPNVHWDDIGGLEDVKQELREAVEWPLKYPKAFK 574

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP G+L++GPPG  KTL+A+AVA+E+  NF+A++GPE+ SKWVGESEK +R +F 
Sbjct: 575  RLGITPPKGVLLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSKWVGESEKRIREIFR 634

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  +P+IIF DEID +A  RG  ++G  V+DR+++QLL E+DGL +   V VIAATNR
Sbjct: 635  KARQASPAIIFIDEIDAIAPARGT-AEGEKVTDRIINQLLTEMDGLVENSGVVVIAATNR 693

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV+++ELA  +EG TGA
Sbjct: 694  PDILDPALLRPGRFDRLILVPAPDEKARFEIFKVHTRGMPLADDVDLKELARRTEGYTGA 753

Query: 983  DISLICREAAISAIEEN----------------LDASRITMQHLKTAIRHVQPSEIHSYK 1026
            DI+ +CREAA++A+                   L +  +T +  + A++ V+PS      
Sbjct: 754  DIAAVCREAAMNALRRAVAKLSPEELEEESEKFLKSLIVTRKDFEVALKKVKPSVTKYMM 813

Query: 1027 ELSAKFQ 1033
            E   +F+
Sbjct: 814  EYYRQFE 820



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/212 (50%), Positives = 147/212 (69%), Gaps = 2/212 (0%)

Query: 755 MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
           ++V P A+     ++P+V +ED+GG +E   ++ E VE P KH E F+R+G  PP G+L+
Sbjct: 192 VEVLPQAVEVREEKIPEVTYEDIGGLKEAIEKIREMVELPLKHPELFERLGIEPPKGVLL 251

Query: 815 FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
           +GPPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF 
Sbjct: 252 YGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIFI 311

Query: 875 DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
           DEID +A  R +E  G  V  RV+SQLL  +DGL  R  V VIAATNRPD +DPAL RPG
Sbjct: 312 DEIDAIAPKR-EEVVG-EVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDALDPALRRPG 369

Query: 935 RFDRLLYVGPPNETDREEIFRIHLRKIPCSSD 966
           RFDR + VG P++  R+EI +IH R +P   D
Sbjct: 370 RFDREIEVGVPDKQGRKEILQIHTRGMPIEPD 401



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/306 (37%), Positives = 163/306 (53%), Gaps = 50/306 (16%)

Query: 391 TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
            LP A ++  + +     +DI   GGL +    +++++ +          LG+ P KGVL
Sbjct: 194 VLPQAVEVREEKIPEVTYEDI---GGLKEAIEKIREMVELPLKHPELFERLGIEPPKGVL 250

Query: 449 LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
           L+GPPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L E+F  A ++APA++F
Sbjct: 251 LYGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIF 310

Query: 509 IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
           IDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+++PALRRPGR
Sbjct: 311 IDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDALDPALRRPGR 370

Query: 569 LDR---------------------------------------EIEIDMSFLFSLLKNSPA 589
            DR                                       E+E D  F    +K    
Sbjct: 371 FDREIEVGVPDKQGRKEILQIHTRGMPIEPDFEKETVIKALKELEKDDRFDKEKIKKIIE 430

Query: 590 AVPSPAQRLEILHALLSG------MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
            V       EI   L         +   L+D  ++ L+  THGFVGADLAAL  EAA+V 
Sbjct: 431 KVSKAKSEEEIKDILREDRNLYIEVRTKLIDKLLDELAEVTHGFVGADLAALAREAAMVV 490

Query: 644 LRRYSK 649
           LRR  K
Sbjct: 491 LRRLIK 496



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/216 (46%), Positives = 135/216 (62%), Gaps = 20/216 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                LG+ P KGVLL+GPPGTGKT LA+  A +S  N   + GPEV+S+  GESE+ + 
Sbjct: 571 KAFKRLGITPPKGVLLYGPPGTGKTLLAKAVATESQANFIAIRGPEVLSKWVGESEKRIR 630

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           E+F  A Q++PA++FIDE+DAIAPAR    GE+++ R++  LL  MDG+    GV+VIAA
Sbjct: 631 EIFRKARQASPAIIFIDEIDAIAPARGTAEGEKVTDRIINQLLTEMDGLVENSGVVVIAA 690

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD ++PAL RPGR DR I                 VP+P +  R EI      GM  
Sbjct: 691 TNRPDILDPALLRPGRFDRLI----------------LVPAPDEKARFEIFKVHTRGMPL 734

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +  D +++ L+  T G+ GAD+AA+C EAA+  LRR
Sbjct: 735 A-DDVDLKELARRTEGYTGADIAAVCREAAMNALRR 769


>gi|448634009|ref|ZP_21674464.1| cell division control protein 48 [Haloarcula vallismortis ATCC 29715]
 gi|448636924|ref|ZP_21675372.1| cell division control protein 48 [Haloarcula sinaiiensis ATCC 33800]
 gi|448661514|ref|ZP_21683669.1| cell division control protein 48 [Haloarcula californiae ATCC 33799]
 gi|445749938|gb|EMA01379.1| cell division control protein 48 [Haloarcula vallismortis ATCC 29715]
 gi|445758344|gb|EMA09658.1| cell division control protein 48 [Haloarcula californiae ATCC 33799]
 gi|445765230|gb|EMA16369.1| cell division control protein 48 [Haloarcula sinaiiensis ATCC 33800]
          Length = 741

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/282 (54%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W++VGG    K Q+ EAVEWP    E F+R+G  P
Sbjct: 436  DFKGALNEVSPSAMREVLVELPKMSWDNVGGLSGPKEQVQEAVEWPMNSPEKFERMGVTP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPGRGGEM-GSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P+   RE+I +IH    P S DV++RELA +S+G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMIGEPDIEGREQILKIHTDDTPLSPDVSLRELAEVSDGFVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ DA  + M+H + A+  V+P+   +I  Y E
Sbjct: 675  REAAIEALREDDDAEEVEMRHFRQAMDSVRPTITDDIREYYE 716



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 162/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+ +LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLAKLATDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   I     K A+  V PS
Sbjct: 424  PSLIDRMIIKRDDFKGALNEVSPS 447



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVNLAKLATDTHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 125/217 (57%), Gaps = 28/217 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FERMGVTPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q AP ++F DELD++AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVAPTIIFFDELDSLAPGR--GGEMGSNVSERVVNQLLTELDGLEEMEDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREI---EIDMSFLFSLLKNSPAAVP-SPAQRLEILHALLSGM 608
           TNRPD I+PAL R GR DR +   E D+     +LK      P SP              
Sbjct: 606 TNRPDMIDPALIRSGRFDRLVMIGEPDIEGREQILKIHTDDTPLSP-------------- 651

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                D  +  L+  + GFVG+DL ++  EAA+  LR
Sbjct: 652 -----DVSLRELAEVSDGFVGSDLESIAREAAIEALR 683


>gi|223478319|ref|YP_002582739.1| Cell division protein FtsH [Thermococcus sp. AM4]
 gi|214033545|gb|EEB74372.1| Cell division protein FtsH [Thermococcus sp. AM4]
          Length = 796

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 155/311 (49%), Positives = 212/311 (68%), Gaps = 21/311 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV+LEVP V+WED+GG  +VK +L EAVEWP K+ EAF 
Sbjct: 485  LKVTRKDFYEALKMVEPSALREVLLEVPNVRWEDIGGLEDVKQELREAVEWPLKYPEAFM 544

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A+KGPE+ SKWVGESEK +R +F 
Sbjct: 545  GLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNIREIFR 604

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VI ATNR
Sbjct: 605  KARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRLINQLLTEMDGIQENSGVVVIGATNR 662

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+ V  P+E  R EIF++H RK+P + DVN+ ELA  +EG TGA
Sbjct: 663  PDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRKVPLAEDVNLEELAKRTEGYTGA 722

Query: 983  DISLICREAAISAIEENLDAS---------------RITMQHLKTAIRHVQPS----EIH 1023
            DI  + REAA+ A+   L                  ++TM+  + A++ + PS     + 
Sbjct: 723  DIEAVVREAAMLAMRRALQEGIIKPGMKADEIRRKVKVTMKDFEEALKKIGPSVSKETME 782

Query: 1024 SYKELSAKFQR 1034
             Y+++  +F++
Sbjct: 783  YYRKIQEQFKQ 793



 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 114/261 (43%), Positives = 165/261 (63%), Gaps = 10/261 (3%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG ++V  ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179  VTYEDIGGLKDVIQKVREMIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EA  +F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E+ G 
Sbjct: 239  EANAHFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKR-EETHG- 296

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV+SQLL  +DGL  R  V VI ATNRPD IDPAL RPGRFDR L VG P++  R+
Sbjct: 297  EVEKRVVSQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDRELEVGVPDKQGRK 356

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EI +IH R +P   +    ++  + E   G +      + AI  +E+  D      + +K
Sbjct: 357  EILQIHTRGMPIEPEFRRSKVLEILEKLRGDERFRDVIDRAIEKVEKAKDE-----EEIK 411

Query: 1012 TAIRHVQPSEIHSYKELSAKF 1032
             A++ +       Y+E+ AK 
Sbjct: 412  KALKELDE---RLYEEIRAKL 429



 Score =  180 bits (457), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 165/304 (54%), Gaps = 56/304 (18%)

Query: 310 SWLYSR----SLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNA 365
            WL+SR     ++ G+ + V +L +   F+V      PA +       Q+TE  D     
Sbjct: 114 EWLHSRLVGRPVVRGDYIKVGILGQELTFVVTATT--PAGIV------QITEFTD----- 160

Query: 366 FVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKD 425
           F ++ +       P+  VSK+   G      + ++++           GGL      +++
Sbjct: 161 FQVSEK-------PVKEVSKAAALG------VTYEDI-----------GGLKDVIQKVRE 196

Query: 426 II-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQN 484
           +I +          LG+ P KGVLL+GPPGTGKT LA+  A+++  +   +NGPE++S+ 
Sbjct: 197 MIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKY 256

Query: 485 YGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRT 544
           YGESE+ L EVF  A ++APA++FIDE+DAIAP R++   E+ +R+V+ LL LMDG+   
Sbjct: 257 YGESEERLREVFKEAEENAPAIIFIDEIDAIAPKREETHGEVEKRVVSQLLTLMDGLKSR 316

Query: 545 DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL 604
             V+VI ATNRPD+I+PALRRPGR DRE+E+               VP    R EIL   
Sbjct: 317 GKVIVIGATNRPDAIDPALRRPGRFDRELEV--------------GVPDKQGRKEILQIH 362

Query: 605 LSGM 608
             GM
Sbjct: 363 TRGM 366



 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 128/211 (60%), Gaps = 19/211 (9%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
            LG+ P KG+LL+GPPGTGKT LA+  A++S  N   + GPEV+S+  GESE+ + E+F 
Sbjct: 545 GLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNIREIFR 604

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            A Q+AP V+FIDE+DAIAP R      ++ R++  LL  MDG+    GV+VI ATNRPD
Sbjct: 605 KARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRLINQLLTEMDGIQENSGVVVIGATNRPD 664

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDS 615
            I+PAL RPGR DR I                 VP+P +  RLEI       +  +  D 
Sbjct: 665 IIDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRKVPLA-EDV 707

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            +E L+  T G+ GAD+ A+  EAA++ +RR
Sbjct: 708 NLEELAKRTEGYTGADIEAVVREAAMLAMRR 738


>gi|448305851|ref|ZP_21495779.1| ATPase AAA [Natronorubrum sulfidifaciens JCM 14089]
 gi|445587851|gb|ELY42101.1| ATPase AAA [Natronorubrum sulfidifaciens JCM 14089]
          Length = 742

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 207/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLHDAKEQVQESVEWPLNNPERFSRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGEV-GSNVSERVVNQLLTELDGLEEMENVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH    P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVDGRERILDIHTEDTPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+++  +F+
Sbjct: 675  REAAIEALREDHEADLVEMRHFRQAMENVRPTITDDILEYYEQIEEEFK 723



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 117/264 (44%), Positives = 163/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  Q  + A+  V+PS
Sbjct: 424  PSLIDRMIVKRQDFRGALNEVEPS 447



 Score =  213 bits (541), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVNLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 126/215 (58%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FSRLGVDPPSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGEVGSNVSERVVNQLLTELDGLEEMENVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL       E + 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDVDGRERILDI---HTEDTP 648

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           L ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 649 LAADVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|301623590|ref|XP_002941102.1| PREDICTED: spermatogenesis-associated protein 5-like [Xenopus
            (Silurana) tropicalis]
          Length = 792

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 150/296 (50%), Positives = 213/296 (71%), Gaps = 2/296 (0%)

Query: 738  EKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKH 797
            E   ++ + L DF +A  +VRPSAMREV ++VP V W D+GG   VK +L +AVEWP  H
Sbjct: 491  EMAGSVVITLNDFLQATNEVRPSAMREVAIDVPNVSWSDIGGLENVKLKLKQAVEWPLMH 550

Query: 798  QEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 857
             ++F R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLAVKGPEL +K+VGESE+AV
Sbjct: 551  PDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAVKGPELMNKYVGESERAV 610

Query: 858  RSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVI 917
            R +F KARA APSI+FFDEID LA  RG  S   SV+DRV++QLL E+DG+ Q  +V ++
Sbjct: 611  REIFHKARAVAPSILFFDEIDALAIERG--SSAGSVADRVLAQLLTEMDGIEQLKDVVIL 668

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            AATNRPD ID AL+RPGR DR++YV  P+   R EIF++    +P S+++ + +L   +E
Sbjct: 669  AATNRPDLIDKALMRPGRIDRIIYVPLPDAATRREIFKLRFHSMPISTEICLEKLVEQTE 728

Query: 978  GCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
              +GA+I+ +CREAA+ A+EE++ A  I  +H + A+  V P    S  +   ++Q
Sbjct: 729  KYSGAEITAVCREAALLALEEDIQAEFIMGRHFEKALAIVTPRIPDSLIQFYERYQ 784



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/271 (40%), Positives = 164/271 (60%), Gaps = 27/271 (9%)

Query: 393 PNAQIEFQNVQATVEQDISKL---------GGLSKEYAILKDII-ISSSVKSTLSSLGLR 442
           P  +I ++  + T  ++  +L         GGL  E   +++ I +         + G+ 
Sbjct: 227 PQTKITYKEQKTTTAKETDELKRKVTYNMIGGLKAELKEIRETIELPLKQPELFRNYGIP 286

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P +GVLL+GPPGTGKT +AR  A++ G ++  +NGPE+VS+ YGESE  L ++F  ASQ 
Sbjct: 287 PPRGVLLYGPPGTGKTLIARAIANEVGAHVTVINGPEIVSKFYGESEARLRQIFADASQC 346

Query: 503 APAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG---VLVIAATNRPDSI 559
            P+++FIDELDA+ P R+    E+ +R+VA+LL LMDG+   +    +LV+ ATNRP S+
Sbjct: 347 CPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEESQGQLLVLGATNRPHSL 406

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY 619
           +PALRRPGR D+EIEI               VP+   RL+IL  +L  + H L + ++  
Sbjct: 407 DPALRRPGRFDKEIEI--------------GVPNAQGRLDILQKVLKKVPHRLKEEDLAQ 452

Query: 620 LSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           L+  THG+VGADLAALC EA +  LRR  ++
Sbjct: 453 LADRTHGYVGADLAALCKEAGMNALRRTHRV 483



 Score =  181 bits (458), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 140/230 (60%), Gaps = 6/230 (2%)

Query: 771 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
           KV +  +GG +    ++ E +E P K  E F+  G  PP G+L++GPPG  KTL+ARA+A
Sbjct: 250 KVTYNMIGGLKAELKEIRETIELPLKQPELFRNYGIPPPRGVLLYGPPGTGKTLIARAIA 309

Query: 831 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
           +E G +   + GPE+ SK+ GESE  +R +FA A    PSIIF DE+D L   R  E   
Sbjct: 310 NEVGAHVTVINGPEIVSKFYGESEARLRQIFADASQCCPSIIFIDELDALCPKR--EGAQ 367

Query: 891 VSVSDRVMSQLLVELDGL---HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             V  RV++ LL  +DG+     +  + V+ ATNRP  +DPAL RPGRFD+ + +G PN 
Sbjct: 368 NEVEKRVVASLLTLMDGIGSEESQGQLLVLGATNRPHSLDPALRRPGRFDKEIEIGVPNA 427

Query: 948 TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAI 996
             R +I +  L+K+P    + ++ +LA  + G  GAD++ +C+EA ++A+
Sbjct: 428 QGRLDILQKVLKKVPHRLKEEDLAQLADRTHGYVGADLAALCKEAGMNAL 477



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 19/208 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KGVLL+GPPG  KT +A+  A++SG+N   V GPE++++  GESE+A+ E+F  
Sbjct: 557 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAVKGPELMNKYVGESERAVREIFHK 616

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A   AP+++F DE+DA+A  R      ++ R++A LL  MDG+ +   V+++AATNRPD 
Sbjct: 617 ARAVAPSILFFDEIDALAIERGSSAGSVADRVLAQLLTEMDGIEQLKDVVILAATNRPDL 676

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV- 617
           I+ AL RPGR+DR I + +              P  A R EI       M    + +E+ 
Sbjct: 677 IDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLRFHSMP---ISTEIC 719

Query: 618 -EYLSMATHGFVGADLAALCNEAALVCL 644
            E L   T  + GA++ A+C EAAL+ L
Sbjct: 720 LEKLVEQTEKYSGAEITAVCREAALLAL 747


>gi|336252474|ref|YP_004595581.1| AAA family ATPase [Halopiger xanaduensis SH-6]
 gi|335336463|gb|AEH35702.1| AAA family ATPase, CDC48 subfamily [Halopiger xanaduensis SH-6]
          Length = 743

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 203/289 (70%), Gaps = 4/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E K Q+ E+VEWP    E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLNEAKEQVQESVEWPLSSPERFDRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG    G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEDMEDVMVIGATNRPDMIDP 615

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH    P ++DV++RE+A +++G  G+D+  I 
Sbjct: 616  ALLRSGRFDRLVMIGEPDVEGRERILEIHTEDTPLAADVSLREIAEITDGYVGSDLESIA 675

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A  + M+H + A+ +V+P+     +  Y+ +  +FQ
Sbjct: 676  REAAIEALREDEEADVVEMRHFRQAMENVRPTITEDILDYYERIEDEFQ 724



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 117/264 (44%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  213 bits (541), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVNLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 27/228 (11%)

Query: 428 ISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
           +  SV+  LSS      LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++
Sbjct: 474 VQESVEWPLSSPERFDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLL 533

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG--GEELSQRMVATLLNLMD 539
           S+  GESE+A+ + F  A Q +P V+F DELDA+AP R  G  G  +S+R+V  LL  +D
Sbjct: 534 SKWVGESEKAIRQTFRKARQVSPTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELD 593

Query: 540 GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLE 599
           G+   + V+VI ATNRPD I+PAL R GR DR + I                P    R  
Sbjct: 594 GLEDMEDVMVIGATNRPDMIDPALLRSGRFDRLVMI--------------GEPDVEGRER 639

Query: 600 ILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           IL       E + L ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 640 ILEI---HTEDTPLAADVSLREIAEITDGYVGSDLESIAREAAIEALR 684


>gi|222480132|ref|YP_002566369.1| ATPase AAA [Halorubrum lacusprofundi ATCC 49239]
 gi|222453034|gb|ACM57299.1| AAA family ATPase, CDC48 subfamily [Halorubrum lacusprofundi ATCC
            49239]
          Length = 740

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 206/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E + Q+ E+VEWP    E F R+G  P
Sbjct: 436  DFGAALNEVEPSAMREVLVELPKISWDDVGGLSEAQQQVQESVEWPLSSPEKFDRMGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPSRGQEM-GNNVSERVVNQLLTELDGLEEMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P++  RE I  IH +  P + DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDQEGRERILEIHTQDTPLAPDVTLREIAEITDGYVGSDLEGIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ ++ DA  + M+H + A+  V+P+     +  Y+E+  +F+
Sbjct: 675  REAAIEALRDDDDAEEVEMKHFRRALESVRPTINDDILAYYEEVEEQFK 723



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F ++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +        S LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 139/241 (57%), Gaps = 29/241 (12%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAH 466
           +GGLS+    +++     SV+  LSS      +G+ P KGVLL+GPPGTGKT +A+  A+
Sbjct: 464 VGGLSEAQQQVQE-----SVEWPLSSPEKFDRMGVDPPKGVLLYGPPGTGKTLMAKAVAN 518

Query: 467 DSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE 525
           ++  N  +V GP+++S+  GESE+A+ + F  A Q +P ++F DELD++AP+R ++ G  
Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNN 578

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +S+R+V  LL  +DG+     V+VI ATNRPD I+PAL R GR DR + I          
Sbjct: 579 VSERVVNQLLTELDGLEEMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI---------- 628

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLL-DSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 P    R  IL   +   +  L  D  +  ++  T G+VG+DL  +  EAA+  L
Sbjct: 629 ----GQPDQEGRERILE--IHTQDTPLAPDVTLREIAEITDGYVGSDLEGIAREAAIEAL 682

Query: 645 R 645
           R
Sbjct: 683 R 683


>gi|410670498|ref|YP_006922869.1| cell division control protein 48 [Methanolobus psychrophilus R15]
 gi|409169626|gb|AFV23501.1| cell division control protein 48 [Methanolobus psychrophilus R15]
          Length = 746

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 158/328 (48%), Positives = 217/328 (66%), Gaps = 23/328 (7%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF+ A   + PSAMREV +EVP V+W ++GG    K +L EAVEWP K+ E F+
Sbjct: 420  LQVTRKDFDDALRNIEPSAMREVFVEVPSVRWSEIGGLDAAKQELSEAVEWPLKYPELFE 479

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             + TRPP GI++FGPPG  KT++A+AVA+E+  NF+++KGPEL S++VGESE+AVR  F 
Sbjct: 480  AVSTRPPRGIMLFGPPGTGKTMLAKAVATESEANFISIKGPELLSRYVGESERAVRETFR 539

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+  AP++IFFDEID +A+ RG   D  S S+RV+SQ+L E+DG+ +  +V +IAATNR
Sbjct: 540  KAKQAAPTVIFFDEIDSMASERGSSIDAHS-SERVVSQILTEIDGVEELRDVVIIAATNR 598

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP+   RE+IF IHL   P + DVN+ ELA ++EG  G+
Sbjct: 599  PDIVDPALLRPGRFDRLIYVRPPDTKGREKIFDIHLHGKPLADDVNVHELAHMTEGYVGS 658

Query: 983  DISLICREAAISAIEE-------------NLDASRITMQHLKTAIRHVQPSEIHS----Y 1025
            DI  ICREA++ A+ E              +   +IT  H   AIR V+P+   +    Y
Sbjct: 659  DIEAICREASMLALREIVTPGLSREEAKSRVVGIKITSVHFMKAIRRVKPTTSRTAMSLY 718

Query: 1026 KELSAKFQRLVHSNAE-----ADESGYQ 1048
            ++ S  F R   +  E       E+GYQ
Sbjct: 719  EQASEAFARYAANEEEKVLDLGGETGYQ 746



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/267 (42%), Positives = 164/267 (61%), Gaps = 19/267 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ +ED+GG +     + E +E P KH E F+++   PP G+L++GPPG  KTL+ARAVA
Sbjct: 173  QINYEDIGGLKRELGLVREMIELPLKHPELFQKLAVDPPKGVLLYGPPGTGKTLIARAVA 232

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE   NF++V GPE+ SK+ GESE  +R +F  A  NAPSIIF DEID +A  R  E  G
Sbjct: 233  SETDANFISVSGPEIVSKYYGESEHKLRQIFEDAEKNAPSIIFIDEIDSIAPKR-DEVLG 291

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              +  R+++QLL  +DGL  R  V VIAATNRP+ ID AL R GRFDR + VG P+   R
Sbjct: 292  -EMERRIVAQLLSLMDGLTSRGKVVVIAATNRPNSIDEALRRGGRFDREIEVGIPDSEGR 350

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------- 997
             +I  +H R +P    +N+ E+A ++ G  GAD+S +C+EAA+ A+              
Sbjct: 351  LQILFVHTRGMPLEEGLNLEEIAAVTHGFVGADLSSLCKEAAMHALRRMLPNLKIDDVED 410

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E ++  ++T +    A+R+++PS
Sbjct: 411  EIPPEFMEKLQVTRKDFDDALRNIEPS 437



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/261 (43%), Positives = 162/261 (62%), Gaps = 25/261 (9%)

Query: 394 NAQIEFQN---VQATVEQDIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGV 447
           N QI  +    VQ  +   I+   +GGL +E  +++++I +          L + P KGV
Sbjct: 155 NTQIHLRESTVVQEGIAGQINYEDIGGLKRELGLVREMIELPLKHPELFQKLAVDPPKGV 214

Query: 448 LLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVV 507
           LL+GPPGTGKT +AR  A ++  N  +V+GPE+VS+ YGESE  L ++F+ A ++AP+++
Sbjct: 215 LLYGPPGTGKTLIARAVASETDANFISVSGPEIVSKYYGESEHKLRQIFEDAEKNAPSII 274

Query: 508 FIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPG 567
           FIDE+D+IAP R +   E+ +R+VA LL+LMDG+     V+VIAATNRP+SI+ ALRR G
Sbjct: 275 FIDEIDSIAPKRDEVLGEMERRIVAQLLSLMDGLTSRGKVVVIAATNRPNSIDEALRRGG 334

Query: 568 RLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLLDSEVEYLSMATH 625
           R DREIE+               +P    RL+IL     GM  E  L    +E ++  TH
Sbjct: 335 RFDREIEV--------------GIPDSEGRLQILFVHTRGMPLEEGL---NLEEIAAVTH 377

Query: 626 GFVGADLAALCNEAALVCLRR 646
           GFVGADL++LC EAA+  LRR
Sbjct: 378 GFVGADLSSLCKEAAMHALRR 398



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 85/211 (40%), Positives = 125/211 (59%), Gaps = 16/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             ++  RP +G++L GPPGTGKT LA+  A +S  N  ++ GPE++S+  GESE+A+ E 
Sbjct: 478 FEAVSTRPPRGIMLFGPPGTGKTMLAKAVATESEANFISIKGPELLSRYVGESERAVRET 537

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q+AP V+F DE+D++A  R    +   S+R+V+ +L  +DGV     V++IAATN
Sbjct: 538 FRKAKQAAPTVIFFDEIDSMASERGSSIDAHSSERVVSQILTEIDGVEELRDVVIIAATN 597

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD ++PAL RPGR DR           L+   P   P    R +I    L G   +  D
Sbjct: 598 RPDIVDPALLRPGRFDR-----------LIYVRP---PDTKGREKIFDIHLHGKPLA-DD 642

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             V  L+  T G+VG+D+ A+C EA+++ LR
Sbjct: 643 VNVHELAHMTEGYVGSDIEAICREASMLALR 673


>gi|304313998|ref|YP_003849145.1| cell division protein 48 [Methanothermobacter marburgensis str.
            Marburg]
 gi|302587457|gb|ADL57832.1| predicted cell division protein 48 [Methanothermobacter marburgensis
            str. Marburg]
          Length = 729

 Score =  314 bits (805), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 144/272 (52%), Positives = 198/272 (72%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A  +V+PSA+REV+++VP V WED+GG  + K +L EAVEWP K+ + FK+ G +P
Sbjct: 448  DFKEALKEVQPSALREVLVQVPNVSWEDIGGLEDAKQELREAVEWPLKYPDRFKKFGIKP 507

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+ G PG  KTL+A+AVA+E+  NF+AVKGPEL SKWVGESEK VR +F KAR  A
Sbjct: 508  PKGILLHGSPGTGKTLLAKAVANESQANFIAVKGPELLSKWVGESEKGVREVFRKARQTA 567

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A++R   +    V+ RV++QLL E+DGL +  +V VIAATNRPD +DP
Sbjct: 568  PTVIFFDEIDSIASVRSGSTADSGVTQRVVNQLLTEIDGLEELQDVAVIAATNRPDILDP 627

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDR + V  P+   R  IF++H + +P + DVN+ +LA  +EG  GADI  +C
Sbjct: 628  ALLRPGRFDRHVKVDDPDREARLAIFKVHTKDMPLADDVNLEKLADKTEGYVGADIEAVC 687

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAA+  + EN+DA  + M+H   A+  ++P 
Sbjct: 688  REAAMLTLRENMDAEDVPMKHFLEAMEKIKPK 719



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/263 (44%), Positives = 167/263 (63%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG +E   ++ E +E P K  E F+R+G  PP G+LM GPPG  KTL+A+AVA+
Sbjct: 199  VTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGITPPKGVLMHGPPGTGKTLLAKAVAN 258

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F+A+ GPE+ SK+VG SE+ +R  F +A  NAPSIIF DEID +A  R  E    
Sbjct: 259  ESDAHFIAINGPEIMSKYVGGSEERLREFFEEAEENAPSIIFIDEIDAIAPKR--EDVSG 316

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R+++QLL  +DGL  R  V VI ATNRPD +DPAL RPGRFDR + +G P+  +R+
Sbjct: 317  EVERRIVAQLLTLMDGLKSRGQVVVIGATNRPDALDPALRRPGRFDREIEIGVPDREERK 376

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI +IH R +P + DV++ ELA ++ G  GAD+  +C+E+A+  +              +
Sbjct: 377  EILQIHTRGMPLAEDVDLDELAEITHGFVGADLESLCKESAMRVLRRVLPEIKADEEIPK 436

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E L    +T    K A++ VQPS
Sbjct: 437  EVLKKMIVTRADFKEALKEVQPS 459



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/265 (43%), Positives = 162/265 (61%), Gaps = 26/265 (9%)

Query: 393 PNAQIEFQN----------VQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGL 441
           P  Q+E Q+          V+  V+     +GGL +E   ++++I I          LG+
Sbjct: 174 PTTQVEMQSKPVDVSKLEGVKNLVDVTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGI 233

Query: 442 RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
            P KGVL+HGPPGTGKT LA+  A++S  +   +NGPE++S+  G SE+ L E F+ A +
Sbjct: 234 TPPKGVLMHGPPGTGKTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLREFFEEAEE 293

Query: 502 SAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           +AP+++FIDE+DAIAP R+D   E+ +R+VA LL LMDG+     V+VI ATNRPD+++P
Sbjct: 294 NAPSIIFIDEIDAIAPKREDVSGEVERRIVAQLLTLMDGLKSRGQVVVIGATNRPDALDP 353

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
           ALRRPGR DREIEI               VP   +R EIL     GM  +  D +++ L+
Sbjct: 354 ALRRPGRFDREIEI--------------GVPDREERKEILQIHTRGMPLA-EDVDLDELA 398

Query: 622 MATHGFVGADLAALCNEAALVCLRR 646
             THGFVGADL +LC E+A+  LRR
Sbjct: 399 EITHGFVGADLESLCKESAMRVLRR 423



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/214 (43%), Positives = 126/214 (58%), Gaps = 21/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G++P KG+LLHG PGTGKT LA+  A++S  N   V GPE++S+  GESE+ + EV
Sbjct: 500 FKKFGIKPPKGILLHGSPGTGKTLLAKAVANESQANFIAVKGPELLSKWVGESEKGVREV 559

Query: 496 FDSASQSAPAVVFIDELDAIAPARK----DGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           F  A Q+AP V+F DE+D+IA  R     D G  ++QR+V  LL  +DG+     V VIA
Sbjct: 560 FRKARQTAPTVIFFDEIDSIASVRSGSTADSG--VTQRVVNQLLTEIDGLEELQDVAVIA 617

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD ++PAL RPGR DR +++D               P    RL I       M  +
Sbjct: 618 ATNRPDILDPALLRPGRFDRHVKVDD--------------PDREARLAIFKVHTKDMPLA 663

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D  +E L+  T G+VGAD+ A+C EAA++ LR
Sbjct: 664 -DDVNLEKLADKTEGYVGADIEAVCREAAMLTLR 696


>gi|448704017|ref|ZP_21700557.1| ATPase AAA [Halobiforma nitratireducens JCM 10879]
 gi|445796633|gb|EMA47134.1| ATPase AAA [Halobiforma nitratireducens JCM 10879]
          Length = 743

 Score =  314 bits (805), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 205/289 (70%), Gaps = 4/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E K Q+ E+VEWP  + + F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLHEAKEQVQESVEWPLSNPQRFDRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG    G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 615

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DV ++E+A +++G  G+D+  I 
Sbjct: 616  ALLRSGRFDRLVMIGEPDVEGRERILEIHTQDTPLAADVTLQEIAEITDGYVGSDLESIA 675

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE-LSAKFQ 1033
            REAAI A+ E+ +A  + M H + A+ +V+P+   EI  Y E +  +FQ
Sbjct: 676  REAAIEALREDEEADVVEMSHFRQAMENVRPTITDEILDYYERIEEEFQ 724



 Score =  226 bits (575), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 117/264 (44%), Positives = 165/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAQEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAQEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVNLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 124/215 (57%), Gaps = 23/215 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FDRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG--GEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q +P V+F DELDA+AP R  G  G  +S+R+V  LL  +DG+   + V+VI AT
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEEMEDVMVIGAT 607

Query: 554 NRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           NRPD I+PAL R GR DR + I   D+     +L+      P  A               
Sbjct: 608 NRPDMIDPALLRSGRFDRLVMIGEPDVEGRERILEIHTQDTPLAA--------------- 652

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D  ++ ++  T G+VG+DL ++  EAA+  LR
Sbjct: 653 ---DVTLQEIAEITDGYVGSDLESIAREAAIEALR 684


>gi|73668447|ref|YP_304462.1| cell division control protein 48 [Methanosarcina barkeri str. Fusaro]
 gi|72395609|gb|AAZ69882.1| cell division control protein 48 [Methanosarcina barkeri str. Fusaro]
          Length = 754

 Score =  314 bits (805), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 156/299 (52%), Positives = 210/299 (70%), Gaps = 17/299 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   + PSAMREV +EVP V WED+GG    K +L+EAVEWP K+ E F  I  +P
Sbjct: 422  DFKEALKNIEPSAMREVYVEVPHVGWEDIGGLENAKQELIEAVEWPLKYPELFSSINIKP 481

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+FGPPG  KTL+A+AVASE+  NF+++KGPEL SK+VGESE+AVR  F KA+  A
Sbjct: 482  PRGVLLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAVRETFRKAKQAA 541

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  R   SD   VS+RV+SQ+L ELDG+ +  +V ++AATNRPD +DP
Sbjct: 542  PTVVFFDEIDSIAPQRSSVSD-THVSERVVSQILTELDGVEELKDVIIVAATNRPDMVDP 600

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDRL+Y+ PP+   RE+IF IH +  P + DVN+ ELA ++EG  GADI  IC
Sbjct: 601  ALLRPGRFDRLIYIKPPDNISREKIFEIHTQGKPLAEDVNLSELADMTEGYVGADIEGIC 660

Query: 989  REAAISAIEENL--DASR-----------ITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            REAA+ A+ E +   ASR           I+ +H + AIR V+P+   + +E  A ++R
Sbjct: 661  REAAMLALREIVTPGASRKDIEKRAGEVIISKKHFERAIRRVKPT---TSRESLAAYER 716



 Score =  222 bits (566), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 118/270 (43%), Positives = 172/270 (63%), Gaps = 19/270 (7%)

Query: 767  LEVPK-VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
            + VP+ + +ED+GG R     + E +E P +H E F+++G  PP G+L+ GPPG  KTL+
Sbjct: 167  IRVPEGISYEDIGGLRREIQLVREMIELPLRHPELFQKLGIEPPKGVLLHGPPGTGKTLI 226

Query: 826  ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
            A+AVASE   NF+ + GPE+ SK+ GESE+ +R +F +A   APSIIF DEID +A  RG
Sbjct: 227  AKAVASETDANFITISGPEIVSKYYGESEQKLREIFEEAEKEAPSIIFIDEIDSIAPKRG 286

Query: 886  KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
            + +    +  RV++QLL  +DGL+ R  V VIAATNRP+ ID AL R GRFDR + +G P
Sbjct: 287  EVTG--ELERRVVAQLLSLMDGLNSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIP 344

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA---------I 996
            +   R++I  IH R +P   DV++ E+A ++ G  GAD+S +C+EAA+ A         I
Sbjct: 345  DRNGRKQILLIHTRGMPI-QDVSLSEIADVTHGFVGADLSSLCKEAAMHALRRITPEIDI 403

Query: 997  EEN------LDASRITMQHLKTAIRHVQPS 1020
            EE+      LD   +T    K A+++++PS
Sbjct: 404  EEDEIPQEILDKLVVTKDDFKEALKNIEPS 433



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 110/237 (46%), Positives = 153/237 (64%), Gaps = 17/237 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLLHGPPGTGKT +A+  A ++  N
Sbjct: 178 IGGLRREIQLVREMIELPLRHPELFQKLGIEPPKGVLLHGPPGTGKTLIAKAVASETDAN 237

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE+VS+ YGESEQ L E+F+ A + AP+++FIDE+D+IAP R +   EL +R+V
Sbjct: 238 FITISGPEIVSKYYGESEQKLREIFEEAEKEAPSIIFIDEIDSIAPKRGEVTGELERRVV 297

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VIAATNRP+SI+ ALRR GR DREIEI               +
Sbjct: 298 AQLLSLMDGLNSRGEVVVIAATNRPNSIDEALRRGGRFDREIEI--------------GI 343

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
           P    R +IL     GM   + D  +  ++  THGFVGADL++LC EAA+  LRR +
Sbjct: 344 PDRNGRKQILLIHTRGM--PIQDVSLSEIADVTHGFVGADLSSLCKEAAMHALRRIT 398



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 16/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            SS+ ++P +GVLL GPPGTGKT LA+  A +S  N  ++ GPE++S+  GESE+A+ E 
Sbjct: 474 FSSINIKPPRGVLLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAVRET 533

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q+AP VVF DE+D+IAP R    +  +S+R+V+ +L  +DGV     V+++AATN
Sbjct: 534 FRKAKQAAPTVVFFDEIDSIAPQRSSVSDTHVSERVVSQILTELDGVEELKDVIIVAATN 593

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD ++PAL RPGR DR I I                P    R +I      G   +  D
Sbjct: 594 RPDMVDPALLRPGRFDRLIYIKP--------------PDNISREKIFEIHTQGKPLA-ED 638

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             +  L+  T G+VGAD+  +C EAA++ LR
Sbjct: 639 VNLSELADMTEGYVGADIEGICREAAMLALR 669


>gi|159478996|ref|XP_001697584.1| hypothetical protein CHLREDRAFT_120247 [Chlamydomonas reinhardtii]
 gi|158274194|gb|EDO99977.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 501

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 151/259 (58%), Positives = 198/259 (76%), Gaps = 5/259 (1%)

Query: 747  LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
            L DF+ A  +VRPSA+REV +EVP+V+W D+GG + VK  L EAVEWP + Q A  R+G 
Sbjct: 242  LADFKTAETRVRPSALREVAVEVPRVRWSDIGGLQAVKQALQEAVEWPHRAQAAMARLGA 301

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
            +PP G+L++GPPGCSKTL+ARAVA+EAGLNF++VK  EL SK+VGESEKA+ SLFA+ARA
Sbjct: 302  QPPRGVLLYGPPGCSKTLLARAVAAEAGLNFMSVKAGELVSKYVGESEKAIASLFARARA 361

Query: 867  NAPSIIFFDEIDGLAAIRG----KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
             APSIIFFDE+DGL   RG      + G  VS+RV+SQ+L E+DGL  R  VTV+AATNR
Sbjct: 362  VAPSIIFFDELDGLVGSRGGPDQTSAGGGGVSERVLSQMLTEMDGLVDRGGVTVLAATNR 421

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDR-EEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            PD +D ALLRPGRFDRL++V  P++  R   I R+HLR+ P ++DV++  LA  + G +G
Sbjct: 422  PDCVDAALLRPGRFDRLIFVPLPDKEARCAHILRVHLRRTPTAADVDVPYLATRTAGYSG 481

Query: 982  ADISLICREAAISAIEENL 1000
            AD+  + REAA++A+EE+L
Sbjct: 482  ADLGALVREAALAALEEDL 500



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 134/243 (55%), Gaps = 25/243 (10%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL      L++ +      ++ ++ LG +P +GVLL+GPPG  KT LAR  A ++G
Sbjct: 270 SDIGGLQAVKQALQEAVEWPHRAQAAMARLGAQPPRGVLLYGPPGCSKTLLARAVAAEAG 329

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD------GG 523
           +N  +V   E+VS+  GESE+A+  +F  A   AP+++F DELD +  +R        GG
Sbjct: 330 LNFMSVKAGELVSKYVGESEKAIASLFARARAVAPSIIFFDELDGLVGSRGGPDQTSAGG 389

Query: 524 EELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSL 583
             +S+R+++ +L  MDG+    GV V+AATNRPD ++ AL RPGR DR        +F  
Sbjct: 390 GGVSERVLSQMLTEMDGLVDRGGVTVLAATNRPDCVDAALLRPGRFDR-------LIF-- 440

Query: 584 LKNSPAAVPSPAQRLEILHALLSGMEH--SLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
                  VP P +     H L   +    +  D +V YL+  T G+ GADL AL  EAAL
Sbjct: 441 -------VPLPDKEARCAHILRVHLRRTPTAADVDVPYLATRTAGYSGADLGALVREAAL 493

Query: 642 VCL 644
             L
Sbjct: 494 AAL 496



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 23/212 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGG+    + L++++ +        +  G+RP +GVLL+GPPG+GKT LAR  A D+G  
Sbjct: 1   LGGVGPHLSALRELVALPLRAPQLFTHYGIRPPRGVLLYGPPGSGKTLLARAAAADAGGC 60

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG---EELSQ 528
           +  +NGP+VVS+ YGESE +L  +F +A+  AP+VV IDE+DA+APAR  GG   E +S+
Sbjct: 61  VLLINGPDVVSEYYGESESSLKGIFAAATALAPSVVIIDEVDALAPARGGGGWRVEWVSR 120

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
              A +        R   V+V+AATNRPD+++ ALRRPGRL+RE+E+             
Sbjct: 121 WTAAAV-----AAPRHRPVVVVAATNRPDALDAALRRPGRLERELEV------------- 162

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
             VP  A R E+L A L G+ H+L   +V  L
Sbjct: 163 -GVPGAAARREVLQARLRGVRHALSPDQVSDL 193



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 106/185 (57%), Gaps = 4/185 (2%)

Query: 777 VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 836
           +GG     + L E V  P +  + F   G RPP G+L++GPPG  KTL+ARA A++AG  
Sbjct: 1   LGGVGPHLSALRELVALPLRAPQLFTHYGIRPPRGVLLYGPPGSGKTLLARAAAADAGGC 60

Query: 837 FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR 896
            L + GP++ S++ GESE +++ +FA A A APS++  DE+D LA  RG     V    R
Sbjct: 61  VLLINGPDVVSEYYGESESSLKGIFAAATALAPSVVIIDEVDALAPARGGGGWRVEWVSR 120

Query: 897 VMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRI 956
             +  +       +   V V+AATNRPD +D AL RPGR +R L VG P    R E+ + 
Sbjct: 121 WTAAAVAA----PRHRPVVVVAATNRPDALDAALRRPGRLERELEVGVPGAAARREVLQA 176

Query: 957 HLRKI 961
            LR +
Sbjct: 177 RLRGV 181


>gi|429217576|ref|YP_007175566.1| AAA ATPase [Caldisphaera lagunensis DSM 15908]
 gi|429134105|gb|AFZ71117.1| AAA family ATPase, CDC48 subfamily [Caldisphaera lagunensis DSM
            15908]
          Length = 734

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 139/272 (51%), Positives = 200/272 (73%), Gaps = 1/272 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  ++ PS +RE+ +E+P+V WED+GG   +K +L E VEWP K+  +FKRIG +P
Sbjct: 433  DFIAAYKEITPSGLREIQVEIPEVHWEDIGGLESLKQELREVVEWPLKYPNSFKRIGVQP 492

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+FGPPG  KTL+A+AVA+E+G NF+ ++GPE+ SKWVGESE+A+R +F KAR  A
Sbjct: 493  PKGVLLFGPPGTGKTLLAKAVATESGANFITIRGPEVLSKWVGESERAIREIFKKARQYA 552

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P ++FFDEID +AA+RG + +G  V +R++SQLL E+DG+    NV VIAATNRP+ +DP
Sbjct: 553  PVVVFFDEIDAIAALRGID-EGTRVGERIVSQLLTEIDGITDLQNVVVIAATNRPEMVDP 611

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+RPGR ++L+YV PP+E  R EI +IH R +P + DV++ E+A  + G TGAD++ + 
Sbjct: 612  ALIRPGRLEKLVYVPPPDEKGRVEILQIHTRNVPLADDVDLIEIAKRTNGYTGADLAALV 671

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAA+ A+ E+L    +  +H   A+  V+PS
Sbjct: 672  REAAMQALREDLQNGIVKNKHFDVALSKVKPS 703



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/304 (41%), Positives = 192/304 (63%), Gaps = 19/304 (6%)

Query: 740  GCALKLELVDF---------EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEA 790
            G A++L ++D          EK  + V    M ++   VPKV +ED+GG R++ +++ E 
Sbjct: 144  GQAVQLTVIDTRPRGPVIIGEKTSVDVLEKPMAQI--NVPKVTYEDIGGLRDIISRIREL 201

Query: 791  VEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWV 850
            VE P +H E F R+G  PP G+L+FGPPG  KTL+A+AVA+E+   F+A+ GPE+ SK+ 
Sbjct: 202  VELPLRHPELFARLGIEPPKGVLLFGPPGTGKTLLAKAVATESDAYFVAINGPEIMSKFY 261

Query: 851  GESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ 910
            GESE+ +R +F +A+ NAP+IIF DEID +A  R  +     V  RV++QLL  +DGL  
Sbjct: 262  GESEQRLREIFDEAKKNAPAIIFIDEIDAIAPKR--DEVVGEVERRVVAQLLALMDGLEN 319

Query: 911  RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIR 970
            R  V VI ATNR + +DPAL RPGRFDR + V  P++  R EI +IH R +P   DV+  
Sbjct: 320  RGQVIVIGATNRINAVDPALRRPGRFDREIEVPLPDKQGRLEILQIHTRHMPLDGDVDTE 379

Query: 971  ELACLSEGCTGADISLICREAAISAI-----EENLDASRITMQHLKTAIRHVQPSEIHSY 1025
             LA +++G TGAD++ + +EAA+ A+     E +++  +I ++ L+  +  +    I +Y
Sbjct: 380  RLAEITKGYTGADLAALVKEAAMHALRRYLPEIDIEQEKIPVEVLEKMVVTMD-DFIAAY 438

Query: 1026 KELS 1029
            KE++
Sbjct: 439  KEIT 442



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/258 (45%), Positives = 156/258 (60%), Gaps = 26/258 (10%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P AQI   NV     +DI   GGL    + +++++ +        + LG+ P KGVLL G
Sbjct: 174 PMAQI---NVPKVTYEDI---GGLRDIISRIRELVELPLRHPELFARLGIEPPKGVLLFG 227

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A +S      +NGPE++S+ YGESEQ L E+FD A ++APA++FIDE
Sbjct: 228 PPGTGKTLLAKAVATESDAYFVAINGPEIMSKFYGESEQRLREIFDEAKKNAPAIIFIDE 287

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DAIAP R +   E+ +R+VA LL LMDG+     V+VI ATNR ++++PALRRPGR DR
Sbjct: 288 IDAIAPKRDEVVGEVERRVVAQLLALMDGLENRGQVIVIGATNRINAVDPALRRPGRFDR 347

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGFVG 629
           EIE+ +              P    RLEIL        H  LD +V  E L+  T G+ G
Sbjct: 348 EIEVPL--------------PDKQGRLEILQI---HTRHMPLDGDVDTERLAEITKGYTG 390

Query: 630 ADLAALCNEAALVCLRRY 647
           ADLAAL  EAA+  LRRY
Sbjct: 391 ADLAALVKEAAMHALRRY 408



 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/270 (40%), Positives = 154/270 (57%), Gaps = 31/270 (11%)

Query: 382 AVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLG 440
           A  K +    L   Q+E   V     +DI  L  L +E   L++++       ++   +G
Sbjct: 436 AAYKEITPSGLREIQVEIPEVHW---EDIGGLESLKQE---LREVVEWPLKYPNSFKRIG 489

Query: 441 LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSAS 500
           ++P KGVLL GPPGTGKT LA+  A +SG N  T+ GPEV+S+  GESE+A+ E+F  A 
Sbjct: 490 VQPPKGVLLFGPPGTGKTLLAKAVATESGANFITIRGPEVLSKWVGESERAIREIFKKAR 549

Query: 501 QSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
           Q AP VVF DE+DAIA  R  D G  + +R+V+ LL  +DG+     V+VIAATNRP+ +
Sbjct: 550 QYAPVVVFFDEIDAIAALRGIDEGTRVGERIVSQLLTEIDGITDLQNVVVIAATNRPEMV 609

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEV 617
           +PAL RPGRL++ +                 VP P +  R+EIL      +    L  +V
Sbjct: 610 DPALIRPGRLEKLV----------------YVPPPDEKGRVEILQIHTRNVP---LADDV 650

Query: 618 EYLSMA--THGFVGADLAALCNEAALVCLR 645
           + + +A  T+G+ GADLAAL  EAA+  LR
Sbjct: 651 DLIEIAKRTNGYTGADLAALVREAAMQALR 680


>gi|195035729|ref|XP_001989324.1| GH10120 [Drosophila grimshawi]
 gi|193905324|gb|EDW04191.1| GH10120 [Drosophila grimshawi]
          Length = 801

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 144/264 (54%), Positives = 190/264 (71%)

Query: 756  KVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMF 815
            KV+PSAMREV++E P V W D+GGQ  ++  L +A+EWP  H + F+R+G +PP G+LMF
Sbjct: 522  KVKPSAMREVLIENPNVLWSDIGGQSALRLTLQQAIEWPLLHADKFERLGIKPPRGVLMF 581

Query: 816  GPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFD 875
            GPPGCSKT++A+A+A+E+ LNFLA+KGPELFS WVGESE+AVR +F KAR  AP+IIFFD
Sbjct: 582  GPPGCSKTMIAKALATESKLNFLAIKGPELFSMWVGESERAVREVFRKARQVAPAIIFFD 641

Query: 876  EIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGR 935
            EID +   R +   G SV +RV++QLL ELDG+    NVT++AATNRPD ID ALLRPGR
Sbjct: 642  EIDAIGGERSEGGAGASVKERVLTQLLTELDGVEALHNVTIVAATNRPDMIDKALLRPGR 701

Query: 936  FDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA 995
             DR+ YVG P    R EI  I LR +P + DV +  L   ++G +GA+I  +C EAAI A
Sbjct: 702  IDRVCYVGLPEAEARREILGIKLRAMPLAEDVLVERLVERTDGYSGAEIQAVCHEAAICA 761

Query: 996  IEENLDASRITMQHLKTAIRHVQP 1019
            +E + +A  +   H +TA+  V P
Sbjct: 762  LEHSFEADVVHWAHFETALERVPP 785



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 125/222 (56%), Gaps = 21/222 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P +GVL+ GPPG  KT +A+  A +S +N   + GPE+ S   GESE+A+ EVF  
Sbjct: 570 LGIKPPRGVLMFGPPGCSKTMIAKALATESKLNFLAIKGPELFSMWVGESERAVREVFRK 629

Query: 499 ASQSAPAVVFIDELDAIAPARKDG--GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A Q APA++F DE+DAI   R +G  G  + +R++  LL  +DGV     V ++AATNRP
Sbjct: 630 ARQVAPAIIFFDEIDAIGGERSEGGAGASVKERVLTQLLTELDGVEALHNVTIVAATNRP 689

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR   +               +P    R EIL   L  M  +  D  
Sbjct: 690 DMIDKALLRPGRIDRVCYV--------------GLPEAEARREILGIKLRAMPLA-EDVL 734

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLH 658
           VE L   T G+ GA++ A+C+EAA+  L         +DV+H
Sbjct: 735 VERLVERTDGYSGAEIQAVCHEAAICALEH----SFEADVVH 772



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 136/247 (55%), Gaps = 31/247 (12%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLAR-LCA---- 465
           +K+GGL K+ +++++ +  +     L + G++ ++G+LL+G  G GK+ +   +C     
Sbjct: 278 AKIGGLDKQLSLVEESMEYALGYKPLPA-GIKISRGLLLYGASGCGKSLICEAMCTAAKQ 336

Query: 466 HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP--AVVFIDELDAIAPARKDGG 523
           HD  V +  ++  +V S+  GE+EQ L   F+ A    P   ++ ++++  + P +++GG
Sbjct: 337 HDGQVQIMRISSGDVFSKFLGETEQKLRSHFERAYAHYPHPTLLLLEDVHTLCP-KQEGG 395

Query: 524 EELSQRMVATLLNLMDGV-----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
            +L +R+   LL L+D +        D + V+A T++ +++  ++RR GRLD E+E+   
Sbjct: 396 SDLVKRVSLALLALLDQLSSGHRLEADRIFVLATTSQIEALHSSIRRAGRLDTELEV--- 452

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                        P+P  R EIL  LL   +  L D+E+E ++  THG+VGADLA+L   
Sbjct: 453 -----------GAPAPTARKEILRCLL---QEQLGDAELEQIAAITHGYVGADLASLVYT 498

Query: 639 AALVCLR 645
           A L  LR
Sbjct: 499 ATLATLR 505



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 109/207 (52%), Gaps = 17/207 (8%)

Query: 805 GTRPPTGILMFGPPGCSKTLMARAVASEAG-----LNFLAVKGPELFSKWVGESEKAVRS 859
           G +   G+L++G  GC K+L+  A+ + A      +  + +   ++FSK++GE+E+ +RS
Sbjct: 306 GIKISRGLLLYGASGCGKSLICEAMCTAAKQHDGQVQIMRISSGDVFSKFLGETEQKLRS 365

Query: 860 LFAKARANAP--SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLH--QRVN-- 913
            F +A A+ P  +++  +++  L     K+  G  +  RV   LL  LD L    R+   
Sbjct: 366 HFERAYAHYPHPTLLLLEDVHTLCP---KQEGGSDLVKRVSLALLALLDQLSSGHRLEAD 422

Query: 914 -VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIREL 972
            + V+A T++ + +  ++ R GR D  L VG P  T R+EI R  L++     D  + ++
Sbjct: 423 RIFVLATTSQIEALHSSIRRAGRLDTELEVGAPAPTARKEILRCLLQE--QLGDAELEQI 480

Query: 973 ACLSEGCTGADISLICREAAISAIEEN 999
           A ++ G  GAD++ +   A ++ + E 
Sbjct: 481 AAITHGYVGADLASLVYTATLATLREK 507


>gi|19921202|ref|NP_609585.1| CG5776, isoform A [Drosophila melanogaster]
 gi|442627640|ref|NP_001260420.1| CG5776, isoform B [Drosophila melanogaster]
 gi|7297973|gb|AAF53216.1| CG5776, isoform A [Drosophila melanogaster]
 gi|15291761|gb|AAK93149.1| LD25466p [Drosophila melanogaster]
 gi|220945792|gb|ACL85439.1| CG5776-PA [synthetic construct]
 gi|440213752|gb|AGB92955.1| CG5776, isoform B [Drosophila melanogaster]
          Length = 799

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 145/278 (52%), Positives = 203/278 (73%), Gaps = 3/278 (1%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L++   + A  +++PSAMREV++E P V+W D+GGQ E++  + +A+EWP  H + F+R+
Sbjct: 505  LQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRL 564

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP GILMFGPPGCSKT++A+A+A+E+ LNFL++KGPELFS WVGESE+AVR +F KA
Sbjct: 565  GIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKA 624

Query: 865  RANAPSIIFFDEIDGLAAIR---GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            R  AP+I+FFDEID +   R      S G SV +RV++QLL ELDG+    NVT++AATN
Sbjct: 625  RQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATN 684

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR+LYVG P    R EI +I LR +P S+DV++ +L  L+EG +G
Sbjct: 685  RPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSG 744

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            A+I  +C EAA+ A+E++ +A  +     + A++ V P
Sbjct: 745  AEIQAVCHEAALRALEQSFEAEDVKWTDFEHALKAVPP 782



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 144/275 (52%), Gaps = 27/275 (9%)

Query: 378 PPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKS-TL 436
           P L A    ++   +    IE  NVQ       S +GG S+    ++  I    + +   
Sbjct: 508 PHLQAALTRIKPSAMREVLIECPNVQW------SDIGGQSELRLAMQQAIEWPLLHADKF 561

Query: 437 SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
             LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ GPE+ S   GESE+A+ EVF
Sbjct: 562 QRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVF 621

Query: 497 DSASQSAPAVVFIDELDAIAPAR-----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
             A Q APA+VF DE+DAI   R        G  + +R++  LL  +DGV     V ++A
Sbjct: 622 RKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVA 681

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+ AL RPGR+DR + +               +P    R EIL   L  M  S
Sbjct: 682 ATNRPDMIDKALLRPGRIDRILYV--------------GLPQCEARREILKIKLRAMPIS 727

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             D ++E L   T G+ GA++ A+C+EAAL  L +
Sbjct: 728 -NDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQ 761



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 139/261 (53%), Gaps = 32/261 (12%)

Query: 394 NAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPP 453
           N Q E Q +   + +   ++GGL ++  ++++ +  +    TL + GLR ++G+LL+G  
Sbjct: 257 NQQEEEQKISHRITK--CQIGGLDRQLQLVEESMEYALGFRTLPA-GLRVSRGLLLYGAT 313

Query: 454 GTGKTS-LARLCA-----HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP--A 505
           G GK+  L  +CA         V L  +N  EV S+  GE+EQ L  +F+ A    P   
Sbjct: 314 GCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPT 373

Query: 506 VVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV-----CRTDGVLVIAATNRPDSIE 560
           ++ I+++  + P +++   +L +R+    L+L+D +      +     V+A +++ D++ 
Sbjct: 374 LLLIEDVHNLCPKQENS--DLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLH 431

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
           P++RR GRLD E+E+                PS   RLEI+  L+  +EH L D EVE++
Sbjct: 432 PSIRRAGRLDNEVEL--------------GAPSSQARLEIVRCLIKSVEHQLSDEEVEHV 477

Query: 621 SMATHGFVGADLAALCNEAAL 641
           +  THG+VGADLA L   A L
Sbjct: 478 ASITHGYVGADLANLVYAAML 498



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 125/249 (50%), Gaps = 25/249 (10%)

Query: 788  MEAVEWPQKHQEAFKRI--GTRPPTGILMFGPPGCSKTLMARAVA------SEAGLNFLA 839
            ++ VE   ++   F+ +  G R   G+L++G  GC K+++  A+       S+  +  + 
Sbjct: 281  LQLVEESMEYALGFRTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIR 340

Query: 840  VKGPELFSKWVGESEKAVRSLFAKARANAP--SIIFFDEIDGLAAIRGKESDGVSVSDRV 897
            +   E++SK++GE+E+ + ++F +A  + P  +++  +++  L   + + SD V    RV
Sbjct: 341  INSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCP-KQENSDLVK---RV 396

Query: 898  MSQLLVELDGLHQRVNVT-----VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
                L  LD L     +      V+A +++ D + P++ R GR D  + +G P+   R E
Sbjct: 397  SLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLE 456

Query: 953  IFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            I R  ++ +    SD  +  +A ++ G  GAD++ +   A + A       + + M HL+
Sbjct: 457  IVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQA-----QPNPLQMPHLQ 511

Query: 1012 TAIRHVQPS 1020
             A+  ++PS
Sbjct: 512  AALTRIKPS 520


>gi|448401950|ref|ZP_21571861.1| AAA family ATPase, CDC48 subfamily protein [Haloterrigena limicola
            JCM 13563]
 gi|445666008|gb|ELZ18679.1| AAA family ATPase, CDC48 subfamily protein [Haloterrigena limicola
            JCM 13563]
          Length = 743

 Score =  313 bits (803), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 151/282 (53%), Positives = 201/282 (71%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PKV W+DVGG  + K Q+ E+VEWP    E F R+G  P
Sbjct: 436  DFRGALAEVEPSAMREVLVELPKVTWDDVGGLSDPKEQVKESVEWPLSSPERFDRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGEV-GSNVSERVVNQLLTELDGLEEMGNVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH    P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVDGRERILEIHTEDTPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ +A  + M+H + A+ +V+P+   EI  Y E
Sbjct: 675  REAAIEALREDEEADIVEMRHFRQAMENVRPTITDEILEYYE 716



 Score =  222 bits (566), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 110/229 (48%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLGHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  213 bits (541), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVSLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/244 (40%), Positives = 138/244 (56%), Gaps = 35/244 (14%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAH 466
           +GGLS     +K+     SV+  LSS      LG+ P  GVLL+GPPGTGKT +A+  A+
Sbjct: 464 VGGLSDPKEQVKE-----SVEWPLSSPERFDRLGVDPPAGVLLYGPPGTGKTLMAKAVAN 518

Query: 467 DSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-- 524
           ++  N  +V GP+++S+  GESE+A+ + F  A Q +P V+F DELDA+AP R  GGE  
Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTVIFFDELDALAPGR--GGEVG 576

Query: 525 -ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSL 583
             +S+R+V  LL  +DG+     V+VI ATNRPD I+PAL R GR DR + I        
Sbjct: 577 SNVSERVVNQLLTELDGLEEMGNVMVIGATNRPDMIDPALLRSGRFDRLVMI-------- 628

Query: 584 LKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAAL 641
                   P    R  IL       E + L ++V    +A  T G+VG+DL ++  EAA+
Sbjct: 629 ------GEPDVDGRERILEI---HTEDTPLAADVTLREIAEITDGYVGSDLESIAREAAI 679

Query: 642 VCLR 645
             LR
Sbjct: 680 EALR 683


>gi|448415362|ref|ZP_21578162.1| ATPase AAA [Halosarcina pallida JCM 14848]
 gi|445681020|gb|ELZ33461.1| ATPase AAA [Halosarcina pallida JCM 14848]
          Length = 741

 Score =  313 bits (803), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 207/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE A  +V PSAMREV++E+PKV W+DVGG    K ++ E+VEWP   +  F+R+G  P
Sbjct: 436  DFEGALTEVEPSAMREVLVELPKVSWDDVGGLESPKQKVKESVEWPLTSRGKFERMGIEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPARGNEM-GNNVSERVVNQLLTELDGLEENGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P E  RE+I +IH    P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVLIGQPGEEGREQILKIHTDSSPLAPDVSLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHS----YKELSAKFQ 1033
            REAAI A+ E+ DA  I M+H + A+  V+P+   +    Y+++  +F+
Sbjct: 675  REAAIEALREDDDAQEIEMRHFRKAMESVRPTITENLMDYYEQMQDQFK 723



 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 108/229 (47%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEGGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEGGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 127/222 (57%), Gaps = 20/222 (9%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           +     +G+ P KGVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+
Sbjct: 485 RGKFERMGIEPPKGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGESEKAI 544

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            + F  A Q +P ++F DELD++APAR  + G  +S+R+V  LL  +DG+     V+VI 
Sbjct: 545 RQTFRKARQVSPTIIFFDELDSLAPARGNEMGNNVSERVVNQLLTELDGLEENGDVMVIG 604

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL R GR DR + I                P    R +IL       + S
Sbjct: 605 ATNRPDMIDPALIRSGRFDRLVLI--------------GQPGEEGREQILKI---HTDSS 647

Query: 612 LLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQ 651
            L  +V    +A  T G+VG+DL ++  EAA+  LR     Q
Sbjct: 648 PLAPDVSLREIAEITDGYVGSDLESIAREAAIEALREDDDAQ 689


>gi|435852385|ref|YP_007313971.1| AAA family ATPase, CDC48 subfamily [Methanomethylovorans hollandica
            DSM 15978]
 gi|433663015|gb|AGB50441.1| AAA family ATPase, CDC48 subfamily [Methanomethylovorans hollandica
            DSM 15978]
          Length = 745

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 151/284 (53%), Positives = 199/284 (70%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
             EK   + L   DFE A  ++ PSAMREV++E+P VKW DVGG   VK +++EAVEWP  
Sbjct: 430  QEKLEQIMLTRSDFENALREIGPSAMREVLVEIPSVKWADVGGLDIVKQEIIEAVEWPIT 489

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
              E F  +G +PP GIL+FGPPG  KTL+A+AVA+E+  NF+++KGPE+ SKWVGESE+A
Sbjct: 490  KPEKFVEMGIKPPKGILLFGPPGTGKTLVAQAVANESNANFISIKGPEMLSKWVGESERA 549

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            +R +F KAR  AP ++FFDEID +A+ R   S+   VS+RV++QLL ELDGL     + V
Sbjct: 550  IREIFKKARQVAPCVVFFDEIDSIASARSSMSEDGKVSERVVNQLLTELDGLEALKEIVV 609

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
            IAATNRPD IDPALLR GRFDRL+ VG      R  IF+IH R IP +S+V+I ELA ++
Sbjct: 610  IAATNRPDMIDPALLRAGRFDRLVLVGQSTREGRRSIFQIHTRNIPLASNVSIDELANIT 669

Query: 977  EGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            EG  GADI  +CREA + A+ E+ D   I M++   A+  V+P+
Sbjct: 670  EGYVGADIEAVCREAVMLALREDFDIENIDMKYFMEALNKVRPT 713



 Score =  209 bits (532), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 108/267 (40%), Positives = 162/267 (60%), Gaps = 20/267 (7%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + ++D+GG  +   ++ E +E P KH E F+R+   PP GI+++GPPG  KTL+A+AVA+
Sbjct: 189  ITYDDIGGLGDEIQRVREMIELPLKHPELFQRLNIEPPKGIILYGPPGTGKTLIAKAVAN 248

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  NFL + GPE+  K+ GESE+ +R +F +A  +APSI+F DEID +A  R   +   
Sbjct: 249  ESKANFLYIAGPEIMGKYYGESEERIRKIFEEAEEDAPSIVFIDEIDSIAPKRQNVTG-- 306

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R  V VI ATNR D IDPAL RPGRFDR + +G P+   R 
Sbjct: 307  EVERRVVAQLLTMMDGLEERGQVVVIGATNRLDAIDPALRRPGRFDREIEIGVPDAEGRL 366

Query: 952  EIFRIHLRKIPCSSDVN---IRELACLSEGCTGADISLICREAAISAI------------ 996
            EI +IH R +P  SD +   + ++A  ++   GAD+  + +EAA+ A+            
Sbjct: 367  EILQIHTRGVPLGSDADEKYLEDIAKNTQAFVGADLLALVQEAAMRALRRVLPDLNLEDD 426

Query: 997  ---EENLDASRITMQHLKTAIRHVQPS 1020
               +E L+   +T    + A+R + PS
Sbjct: 427  LIPQEKLEQIMLTRSDFENALREIGPS 453



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 146/238 (61%), Gaps = 19/238 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          L + P KG++L+GPPGTGKT +A+  A++S  N
Sbjct: 194 IGGLGDEIQRVREMIELPLKHPELFQRLNIEPPKGIILYGPPGTGKTLIAKAVANESKAN 253

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              + GPE++ + YGESE+ + ++F+ A + AP++VFIDE+D+IAP R++   E+ +R+V
Sbjct: 254 FLYIAGPEIMGKYYGESEERIRKIFEEAEEDAPSIVFIDEIDSIAPKRQNVTGEVERRVV 313

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR D+I+PALRRPGR DREIEI               V
Sbjct: 314 AQLLTMMDGLEERGQVVVIGATNRLDAIDPALRRPGRFDREIEI--------------GV 359

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYL---SMATHGFVGADLAALCNEAALVCLRR 646
           P    RLEIL     G+     D++ +YL   +  T  FVGADL AL  EAA+  LRR
Sbjct: 360 PDAEGRLEILQIHTRGVPLG-SDADEKYLEDIAKNTQAFVGADLLALVQEAAMRALRR 416



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/216 (40%), Positives = 128/216 (59%), Gaps = 31/216 (14%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KG+LL GPPGTGKT +A+  A++S  N  ++ GPE++S+  GESE+A+ E+F  
Sbjct: 497 MGIKPPKGILLFGPPGTGKTLVAQAVANESNANFISIKGPEMLSKWVGESERAIREIFKK 556

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A Q AP VVF DE+D+IA AR    E+  +S+R+V  LL  +DG+     ++VIAATNRP
Sbjct: 557 ARQVAPCVVFFDEIDSIASARSSMSEDGKVSERVVNQLLTELDGLEALKEIVVIAATNRP 616

Query: 557 DSIEPALRRPGRLDREIEIDMSF------LFSL-LKNSPAAVPSPAQRLEILHALLSGME 609
           D I+PAL R GR DR + +  S       +F +  +N P A                   
Sbjct: 617 DMIDPALLRAGRFDRLVLVGQSTREGRRSIFQIHTRNIPLAS------------------ 658

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
               +  ++ L+  T G+VGAD+ A+C EA ++ LR
Sbjct: 659 ----NVSIDELANITEGYVGADIEAVCREAVMLALR 690


>gi|517390|emb|CAA56097.1| cdcH [Halobacterium salinarum]
          Length = 742

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 207/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W+DVGG  E K  + E+VEWP    E F R+G  P
Sbjct: 436  DFKGALSEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG+ + G +VS+RV++QLL ELDGL +   V VIAATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPGRGQ-TGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG P    RE+I +IH +  P ++DV++RELA  ++G  G+D++ I 
Sbjct: 615  ALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ ++ DA  + M H + A+ +V+P+     +  Y ++  +F+
Sbjct: 675  REAAIEALRDDEDADDVGMAHFRAAMENVRPTITDDLMEYYDQVEDQFK 723



 Score =  223 bits (567), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+ ++PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  K A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFKGALSEVEPS 447



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/236 (46%), Positives = 150/236 (63%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A   +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR D+++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEIGREEILKIHTRGMPLS-DDVNLSTLADDTHGFVGADIESLSKEAAMRALRRY 411



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 18/212 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q AP V+F DELD++AP R + GG  +S+R+V  LL  +DG+   + V+VIAATN
Sbjct: 548 FRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAATN 607

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL-L 613
           RPD I+PAL R GR DR +++                P    R +IL   +   +  L  
Sbjct: 608 RPDIIDPALIRSGRFDRLVQV--------------GQPGIEGREQILK--IHTQDTPLAA 651

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D  +  L+    G+VG+DLA +  EAA+  LR
Sbjct: 652 DVSLRELAERADGYVGSDLANIAREAAIEALR 683


>gi|15790615|ref|NP_280439.1| cell division cycle protein [Halobacterium sp. NRC-1]
 gi|169236353|ref|YP_001689553.1| AAA-type ATPase (transitional ATPase homolog) [Halobacterium
            salinarum R1]
 gi|12229754|sp|Q9HPF0.1|CDCH_HALSA RecName: Full=Protein CdcH
 gi|10581137|gb|AAG19919.1| cell division cycle protein [Halobacterium sp. NRC-1]
 gi|167727419|emb|CAP14207.1| AAA-type ATPase (CDC48 subfamily) [Halobacterium salinarum R1]
          Length = 742

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 207/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W+DVGG  E K  + E+VEWP    E F R+G  P
Sbjct: 436  DFKGALSEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG+ + G +VS+RV++QLL ELDGL +   V VIAATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPGRGQ-TGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG P    RE+I +IH +  P ++DV++RELA  ++G  G+D++ I 
Sbjct: 615  ALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ ++ DA  + M H + A+ +V+P+     +  Y ++  +F+
Sbjct: 675  REAAIEALRDDEDADDVGMAHFRAAMENVRPTITDDLMEYYDQVEDQFK 723



 Score =  223 bits (567), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+ ++PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  K A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFKGALSEVEPS 447



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/236 (46%), Positives = 150/236 (63%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A   +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR D+++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEIGREEILKIHTRGMPLS-DDVNLSTLADDTHGFVGADIESLSKEAAMRALRRY 411



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 18/212 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q AP V+F DELD++AP R + GG  +S+R+V  LL  +DG+   + V+VIAATN
Sbjct: 548 FRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAATN 607

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL-L 613
           RPD I+PAL R GR DR +++                P    R +IL   +   +  L  
Sbjct: 608 RPDIIDPALIRSGRFDRLVQV--------------GQPGIEGREQILK--IHTQDTPLAA 651

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D  +  L+    G+VG+DLA +  EAA+  LR
Sbjct: 652 DVSLRELAERADGYVGSDLANIAREAAIEALR 683


>gi|147920791|ref|YP_685403.1| putative cell division cycle protein 48 [Methanocella arvoryzae
            MRE50]
 gi|110620799|emb|CAJ36077.1| putative cell division cycle protein 48 [Methanocella arvoryzae
            MRE50]
          Length = 942

 Score =  313 bits (802), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 157/310 (50%), Positives = 209/310 (67%), Gaps = 18/310 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   + PSAMREV +EVP V W DVGG   VK +L E+VEWP K +E F    T P
Sbjct: 614  DFTEALKNIEPSAMREVFVEVPDVHWSDVGGLDMVKQELRESVEWPLKFKEVFSATNTTP 673

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GI+MFGPPG  KTL+A+AVA+E+  NF+++KGPE+ +K+VGESEKA+R  F KAR +A
Sbjct: 674  PKGIMMFGPPGTGKTLLAKAVANESEANFISIKGPEILNKYVGESEKAIRETFRKARQSA 733

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDEID +A  RG   D   V++RV+SQ+L ELDGL +  NV VIAATNRPD +D 
Sbjct: 734  PTIIFFDEIDAIAPTRGAGFDS-HVTERVVSQMLTELDGLEELHNVVVIAATNRPDMVDT 792

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DRLLY+ PP E  R +I+RIH R  P   DV++ ++A  S+   GADI  +C
Sbjct: 793  ALLRPGRLDRLLYIPPPEEESRLQIYRIHTRGKPLDRDVDLEKIARDSKDYVGADIEAVC 852

Query: 989  REAAISAIEENLDAS-------------RITMQHLKTAIRHVQPS---EIHS-YKELSAK 1031
            REAA+ AI E++                +I M+H + A++ V+P+   ++H  Y++L+A+
Sbjct: 853  REAAMLAIREHITHGMTPEQAKKEAGNIKIKMKHFEAALQKVRPTLSRDMHQRYEKLTAE 912

Query: 1032 FQRLVHSNAE 1041
            F R V    E
Sbjct: 913  FARQVVGTGE 922



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 95/196 (48%), Positives = 132/196 (67%), Gaps = 2/196 (1%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P + +ED+GG R     + E +E P +H E F+++G  PP G+L+FGPPG  KT++A+AV
Sbjct: 177 PHISYEDIGGLRREIGLVREMIELPLRHPELFQKLGIEPPKGVLLFGPPGTGKTMIAKAV 236

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           ASE   +F+ + GPE+ SK+ GESEK +R +F +A  NAPSIIF DEID +A  R +E  
Sbjct: 237 ASETDAHFINISGPEIMSKYYGESEKQLRDIFKEAEDNAPSIIFIDEIDSIAPKR-EEVT 295

Query: 890 GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
           G  V  RV++QLL  +DGL  R  V V+AATNRP+ +DPAL R GRFDR + +G P++  
Sbjct: 296 G-EVERRVVAQLLSLMDGLQSRGQVVVVAATNRPNAVDPALRRGGRFDREIEIGVPDKVG 354

Query: 950 REEIFRIHLRKIPCSS 965
           R EI  +H R +P  +
Sbjct: 355 RLEILHVHTRGMPLKT 370



 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/235 (40%), Positives = 143/235 (60%), Gaps = 16/235 (6%)

Query: 389 EGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGV 447
           E T+    +E +  + T       +GGL +E  +++++I +          LG+ P KGV
Sbjct: 160 EVTISEKPVEAEKAEKTPHISYEDIGGLRREIGLVREMIELPLRHPELFQKLGIEPPKGV 219

Query: 448 LLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVV 507
           LL GPPGTGKT +A+  A ++  +   ++GPE++S+ YGESE+ L ++F  A  +AP+++
Sbjct: 220 LLFGPPGTGKTMIAKAVASETDAHFINISGPEIMSKYYGESEKQLRDIFKEAEDNAPSII 279

Query: 508 FIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPG 567
           FIDE+D+IAP R++   E+ +R+VA LL+LMDG+     V+V+AATNRP++++PALRR G
Sbjct: 280 FIDEIDSIAPKREEVTGEVERRVVAQLLSLMDGLQSRGQVVVVAATNRPNAVDPALRRGG 339

Query: 568 RLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV-EYLS 621
           R DREIEI               VP    RLEILH    GM    L+S +  YLS
Sbjct: 340 RFDREIEI--------------GVPDKVGRLEILHVHTRGMPLKTLNSVITRYLS 380



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 87/216 (40%), Positives = 130/216 (60%), Gaps = 16/216 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K   S+    P KG+++ GPPGTGKT LA+  A++S  N  ++ GPE++++  GESE+A+
Sbjct: 663 KEVFSATNTTPPKGIMMFGPPGTGKTLLAKAVANESEANFISIKGPEILNKYVGESEKAI 722

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIA 551
            E F  A QSAP ++F DE+DAIAP R  G +  +++R+V+ +L  +DG+     V+VIA
Sbjct: 723 RETFRKARQSAPTIIFFDEIDAIAPTRGAGFDSHVTERVVSQMLTELDGLEELHNVVVIA 782

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD ++ AL RPGRLDR           LL   P   P    RL+I      G    
Sbjct: 783 ATNRPDMVDTALLRPGRLDR-----------LLYIPP---PEEESRLQIYRIHTRGKPLD 828

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
             D ++E ++  +  +VGAD+ A+C EAA++ +R +
Sbjct: 829 -RDVDLEKIARDSKDYVGADIEAVCREAAMLAIREH 863



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/29 (62%), Positives = 23/29 (79%)

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           +E L+  T+GFVGAD+AALC EAA+  LR
Sbjct: 560 LERLADTTYGFVGADIAALCKEAAMHALR 588


>gi|448369971|ref|ZP_21556424.1| ATPase AAA [Natrialba aegyptia DSM 13077]
 gi|445650411|gb|ELZ03335.1| ATPase AAA [Natrialba aegyptia DSM 13077]
          Length = 742

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 209/289 (72%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKITWDDVGGLHDAKDQVKESVEWPLNNPERFTRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEDMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH ++ P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDIEGRERILDIHTQETPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A+ + M+H + A+ +V+P+     +  Y+++  +F+
Sbjct: 675  REAAIEALREDHEANVVEMRHFRQAMENVRPTITDDILDYYEQIEDEFK 723



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLSHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  215 bits (548), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVNLSHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 22/214 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FTRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEDMEDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL   +   E  L
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDIEGRERILD--IHTQETPL 649

Query: 613 -LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 650 AADVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|448460369|ref|ZP_21597194.1| ATPase AAA [Halorubrum lipolyticum DSM 21995]
 gi|445807110|gb|EMA57196.1| ATPase AAA [Halorubrum lipolyticum DSM 21995]
          Length = 740

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 206/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E K Q+ E+VEWP    E F R+G   
Sbjct: 436  DFSGALTEVEPSAMREVLVELPKISWDDVGGLSEAKQQVQESVEWPLTTPEKFDRMGVDA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPSRGQEM-GNNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P++  RE+I  IH +  P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDQGGREQILDIHTQDTPIAPDVSLREIAEITDGYVGSDLEGIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ ++ DA  + M+H + A+  V+P+     +  Y+E+  +F+
Sbjct: 675  REAAIEALRDDDDAEEVEMKHFRRALESVRPTINDDILAYYEEVEEQFK 723



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F ++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +        S LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/235 (36%), Positives = 133/235 (56%), Gaps = 17/235 (7%)

Query: 413 LGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS+ +  + + +    +       +G+   KGVLL+GPPGTGKT +A+  A+++  N
Sbjct: 464 VGGLSEAKQQVQESVEWPLTTPEKFDRMGVDAPKGVLLYGPPGTGKTLMAKAVANETNAN 523

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
             +V GP+++S+  GESE+A+ + F  A Q +P ++F DELD++AP+R ++ G  +S+R+
Sbjct: 524 FISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERV 583

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V  LL  +DG+     V+VI ATNRPD I+PAL R GR DR + I               
Sbjct: 584 VNQLLTELDGLEDMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI--------------G 629

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            P    R +IL         +  D  +  ++  T G+VG+DL  +  EAA+  LR
Sbjct: 630 QPDQGGREQILDIHTQDTPIA-PDVSLREIAEITDGYVGSDLEGIAREAAIEALR 683


>gi|55378303|ref|YP_136153.1| cell division control protein 48 [Haloarcula marismortui ATCC 43049]
 gi|55231028|gb|AAV46447.1| cell division control protein 48 [Haloarcula marismortui ATCC 43049]
          Length = 741

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 152/282 (53%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W++VGG    K Q+ EAVEWP    E F+R+G  P
Sbjct: 436  DFKGALNEVSPSAMREVLVELPKMSWDNVGGLSGPKEQVQEAVEWPMNSPEKFERMGVTP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  A
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPGRGGEM-GSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P+   RE+I +IH    P S DV++RELA +S+G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMIGEPDIEGREQILKIHTDDTPLSPDVSLRELAEVSDGFVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ +A  + M+H + A+  V+P+   +I  Y E
Sbjct: 675  REAAIEALREDDNAEEVEMRHFRQAMDSVRPTITDDIREYYE 716



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 162/264 (61%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+ +LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLAKLATDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   I     K A+  V PS
Sbjct: 424  PSLIDRMIIKRDDFKGALNEVSPS 447



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVNLAKLATDTHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 125/217 (57%), Gaps = 28/217 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FERMGVTPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q AP ++F DELD++AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVAPTIIFFDELDSLAPGR--GGEMGSNVSERVVNQLLTELDGLEEMEDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREI---EIDMSFLFSLLKNSPAAVP-SPAQRLEILHALLSGM 608
           TNRPD I+PAL R GR DR +   E D+     +LK      P SP              
Sbjct: 606 TNRPDMIDPALIRSGRFDRLVMIGEPDIEGREQILKIHTDDTPLSP-------------- 651

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                D  +  L+  + GFVG+DL ++  EAA+  LR
Sbjct: 652 -----DVSLRELAEVSDGFVGSDLESIAREAAIEALR 683


>gi|448411395|ref|ZP_21575860.1| ATPase AAA [Halosimplex carlsbadense 2-9-1]
 gi|445670583|gb|ELZ23182.1| ATPase AAA [Halosimplex carlsbadense 2-9-1]
          Length = 741

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 150/282 (53%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PKV W+DVGG  E K ++ E+VEWP    + F+R+G  P
Sbjct: 436  DFRGALNEVSPSAMREVLVELPKVSWDDVGGLEEAKGKVQESVEWPLNKPQKFQRMGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KA+  A
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKAKQVA 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG +  G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPGRGGDV-GSNVSERVVNQLLTELDGLEDMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P+   RE+I RIH    P S DV++RE+A ++EG  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMIGEPDIEGREQILRIHTEDQPLSPDVSLREMAEITEGFVGSDLESIG 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ DA  + M+H + A+ +V+P+   +I  Y E
Sbjct: 675  REAAIEALREDDDAEVVDMRHFRQALDNVRPTITDDIRDYYE 716



 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV +  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVTLGRLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVTLGRLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 123/213 (57%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FQRMGIDPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q AP V+F DELD++AP R  D G  +S+R+V  LL  +DG+   + V+VI ATN
Sbjct: 548 FRKAKQVAPTVIFFDELDSLAPGRGGDVGSNVSERVVNQLLTELDGLEDMEDVMVIGATN 607

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PAL R GR DR + I                P    R +IL       E   L 
Sbjct: 608 RPDMIDPALIRSGRFDRLVMI--------------GEPDIEGREQILRI---HTEDQPLS 650

Query: 615 SEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            +V    MA  T GFVG+DL ++  EAA+  LR
Sbjct: 651 PDVSLREMAEITEGFVGSDLESIGREAAIEALR 683


>gi|448537297|ref|ZP_21622572.1| ATPase AAA [Halorubrum hochstenium ATCC 700873]
 gi|445702141|gb|ELZ54104.1| ATPase AAA [Halorubrum hochstenium ATCC 700873]
          Length = 740

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 205/289 (70%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E + Q+ E+VEWP    E F R+G   
Sbjct: 436  DFSGALNEVEPSAMREVLVELPKISWDDVGGLSEAQQQVQESVEWPLTSPEKFDRMGVNA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E+ G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPARGQEA-GNNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P++  RE+I  IH +  P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDQEGREQILDIHTQNTPLAPDVSLREIAEITDGYVGSDLEGIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHS----YKELSAKFQ 1033
            REAAI A+ ++ DA  + M+H + A+  V+P+        Y E+  +F+
Sbjct: 675  REAAIEALRDDDDAEEVEMKHFRRAMESVRPTITEDILAYYDEVKEQFK 723



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F ++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +        S LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 140/242 (57%), Gaps = 31/242 (12%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAH 466
           +GGLS+    +++     SV+  L+S      +G+   KGVLL+GPPGTGKT +A+  A+
Sbjct: 464 VGGLSEAQQQVQE-----SVEWPLTSPEKFDRMGVNAPKGVLLYGPPGTGKTLMAKAVAN 518

Query: 467 DSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE 525
           ++  N  +V GP+++S+  GESE+A+ + F  A Q +P ++F DELD++APAR ++ G  
Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDSLAPARGQEAGNN 578

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +S+R+V  LL  +DG+     V+VI ATNRPD I+PAL R GR DR + I          
Sbjct: 579 VSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI---------- 628

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVC 643
                 P    R +IL       +++ L  +V    +A  T G+VG+DL  +  EAA+  
Sbjct: 629 ----GQPDQEGREQILDI---HTQNTPLAPDVSLREIAEITDGYVGSDLEGIAREAAIEA 681

Query: 644 LR 645
           LR
Sbjct: 682 LR 683


>gi|448362336|ref|ZP_21550947.1| ATPase AAA [Natrialba asiatica DSM 12278]
 gi|445648857|gb|ELZ01805.1| ATPase AAA [Natrialba asiatica DSM 12278]
          Length = 742

 Score =  313 bits (801), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 209/289 (72%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKITWDDVGGLHDAKDQVKESVEWPLNNPERFTRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEDMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH ++ P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDIEGRERILDIHTQETPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A+ + M+H + A+ +V+P+     +  Y+++  +F+
Sbjct: 675  REAAIEALREDHEANVVEMRHFRQAMENVRPTITDDILDYYEQIEDEFR 723



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 110/229 (48%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVNLSHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVNLSHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 22/214 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FTRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEDMEDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL   +   E  L
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDIEGRERILD--IHTQETPL 649

Query: 613 -LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 650 AADVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|448383033|ref|ZP_21562462.1| AAA family ATPase, CDC48 subfamily protein [Haloterrigena
            thermotolerans DSM 11522]
 gi|445660213|gb|ELZ13010.1| AAA family ATPase, CDC48 subfamily protein [Haloterrigena
            thermotolerans DSM 11522]
          Length = 743

 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 148/282 (52%), Positives = 203/282 (71%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLHDAKDQVQESVEWPLSNPERFDRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDVDGRERILEIHTQDTPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ +A  + M+H + A+ +V+P+   +I  Y E
Sbjct: 675  REAAIEALREDEEADVVEMRHFRQAMENVRPTITDDILDYYE 716



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVSLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVSLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 123/216 (56%), Gaps = 26/216 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+     V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEDMGDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME 609
           TNRPD I+PAL R GR DR + I   D+     +L+      P  A              
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMIGQPDVDGRERILEIHTQDTPLAA-------------- 651

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
               D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 652 ----DVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|448429783|ref|ZP_21584648.1| ATPase AAA [Halorubrum tebenquichense DSM 14210]
 gi|445689839|gb|ELZ42063.1| ATPase AAA [Halorubrum tebenquichense DSM 14210]
          Length = 740

 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 206/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E + Q+ E+VEWP    E F R+G   
Sbjct: 436  DFSGALNEVEPSAMREVLVELPKISWDDVGGLSEAQQQVQESVEWPLTSPEKFDRMGVNA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E+ G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPARGQEA-GNNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P++  RE+I  IH +  P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDQEGREQILDIHTQDTPLAPDVSLREVAEITDGYVGSDLEGIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ ++ DA  + M+H + A+  V+P+     +  Y E+  +F+
Sbjct: 675  REAAIEALRDDDDAEEVEMKHFRRAMESVRPTITDDILAYYDEVKEQFK 723



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F ++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +        S LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/241 (37%), Positives = 139/241 (57%), Gaps = 29/241 (12%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAH 466
           +GGLS+    +++     SV+  L+S      +G+   KGVLL+GPPGTGKT +A+  A+
Sbjct: 464 VGGLSEAQQQVQE-----SVEWPLTSPEKFDRMGVNAPKGVLLYGPPGTGKTLMAKAVAN 518

Query: 467 DSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE 525
           ++  N  +V GP+++S+  GESE+A+ + F  A Q +P ++F DELD++APAR ++ G  
Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDSLAPARGQEAGNN 578

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +S+R+V  LL  +DG+     V+VI ATNRPD I+PAL R GR DR + I          
Sbjct: 579 VSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI---------- 628

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLL-DSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 P    R +IL   +   +  L  D  +  ++  T G+VG+DL  +  EAA+  L
Sbjct: 629 ----GQPDQEGREQILD--IHTQDTPLAPDVSLREVAEITDGYVGSDLEGIAREAAIEAL 682

Query: 645 R 645
           R
Sbjct: 683 R 683


>gi|433590485|ref|YP_007279981.1| AAA family ATPase, CDC48 subfamily [Natrinema pellirubrum DSM 15624]
 gi|448332116|ref|ZP_21521362.1| AAA family ATPase, CDC48 subfamily protein [Natrinema pellirubrum DSM
            15624]
 gi|433305265|gb|AGB31077.1| AAA family ATPase, CDC48 subfamily [Natrinema pellirubrum DSM 15624]
 gi|445627765|gb|ELY81083.1| AAA family ATPase, CDC48 subfamily protein [Natrinema pellirubrum DSM
            15624]
          Length = 743

 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 148/282 (52%), Positives = 203/282 (71%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKISWDDVGGLHDAKDQVQESVEWPLSNPERFDRLGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDVDGRERILEIHTQDTPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ +A  + M+H + A+ +V+P+   +I  Y E
Sbjct: 675  REAAIEALREDEEADVVEMRHFRQAMENVRPTITDDILDYYE 716



 Score =  222 bits (565), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVSLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVSLGHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 123/216 (56%), Gaps = 26/216 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+     V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEDMGDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME 609
           TNRPD I+PAL R GR DR + I   D+     +L+      P  A              
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMIGQPDVDGRERILEIHTQDTPLAA-------------- 651

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
               D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 652 ----DVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|281207192|gb|EFA81375.1| AAA ATPase domain-containing protein [Polysphondylium pallidum PN500]
          Length = 801

 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 146/291 (50%), Positives = 205/291 (70%), Gaps = 19/291 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +KL+  D   A  +V+PS+MREV++E+PKV W D+GGQ  +K +L EAVEWP KH EAF 
Sbjct: 522  IKLKYEDMLLAMTEVKPSSMREVVVEIPKVYWSDIGGQHHIKDKLKEAVEWPLKHPEAFI 581

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP GIL++GPPGCSKTLMA+A+A+E+GLNF+AVKGPEL +               
Sbjct: 582  RMGITPPKGILLYGPPGCSKTLMAKALATESGLNFIAVKGPELLT--------------- 626

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
              R+NAPS++FFDE+DGLA  R  E  G    +RV+SQLL E+DG+    NVT+IAATNR
Sbjct: 627  --RSNAPSVLFFDEMDGLAVKRSGEGSG--AVERVVSQLLTEMDGIQPLTNVTIIAATNR 682

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID A+LR GR DR+LY+  P+   R+EIF IH++K+P + D++I +LA +++G +GA
Sbjct: 683  PDIIDQAILRAGRIDRILYISLPDLPSRKEIFNIHMKKVPHTDDIDINKLAEITDGYSGA 742

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +++ ICREA+I A++EN+ A  ++M+H ++AI  V+           AK+Q
Sbjct: 743  EVASICREASICAMKENIHAEFVSMRHFESAIHQVKKGITDEMIAFYAKYQ 793



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/247 (43%), Positives = 158/247 (63%), Gaps = 18/247 (7%)

Query: 413 LGGLSKEYAILKDIIISSSVKS-TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K+   +K++I  S  KS  L+  G++P +G+LL+GPPGTGKT LAR+ + +    
Sbjct: 278 IGGLKKQVDQVKEMIELSFFKSDILAEFGVKPPRGILLYGPPGTGKTLLARIVSKEINST 337

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           LFT+NG +++ + YG++E+ L  +F  AS  +P+++FIDELDA+ P R D   E+ +R+V
Sbjct: 338 LFTINGADILDKYYGQTEKTLQSIFKDASLKSPSIIFIDELDALCPKRDDNSTEIEKRVV 397

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
            ++L LMDG+     ++VI  TNRPDS++ ALRRPGR DREIEI               +
Sbjct: 398 GSMLTLMDGIDSGSKIIVIGCTNRPDSLDSALRRPGRFDREIEI--------------GI 443

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           P+P  R EIL   ++ + + L  SE+  ++  THGFVGADL ALC EAAL C  R   + 
Sbjct: 444 PNPESREEILKIFMNKIPNDLTASELTEIASRTHGFVGADLEALCKEAALKCFHR---VA 500

Query: 652 TSSDVLH 658
           ++  +LH
Sbjct: 501 STGQLLH 507



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 3/224 (1%)

Query: 771 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
           ++ +  +GG ++   Q+ E +E      +     G +PP GIL++GPPG  KTL+AR V+
Sbjct: 272 EIGYHSIGGLKKQVDQVKEMIELSFFKSDILAEFGVKPPRGILLYGPPGTGKTLLARIVS 331

Query: 831 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            E       + G ++  K+ G++EK ++S+F  A   +PSIIF DE+D L   R  + + 
Sbjct: 332 KEINSTLFTINGADILDKYYGQTEKTLQSIFKDASLKSPSIIFIDELDALCPKR--DDNS 389

Query: 891 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
             +  RV+  +L  +DG+     + VI  TNRPD +D AL RPGRFDR + +G PN   R
Sbjct: 390 TEIEKRVVGSMLTLMDGIDSGSKIIVIGCTNRPDSLDSALRRPGRFDREIEIGIPNPESR 449

Query: 951 EEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAI 993
           EEI +I + KIP   +   + E+A  + G  GAD+  +C+EAA+
Sbjct: 450 EEILKIFMNKIPNDLTASELTEIASRTHGFVGADLEALCKEAAL 493



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 115/207 (55%), Gaps = 32/207 (15%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+ P KG+LL+GPPG  KT +A+  A +SG+N   V GPE+++++              
Sbjct: 583 MGITPPKGILLYGPPGCSKTLMAKALATESGLNFIAVKGPELLTRS-------------- 628

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
              +AP+V+F DE+D +A  R   G    +R+V+ LL  MDG+     V +IAATNRPD 
Sbjct: 629 ---NAPSVLFFDEMDGLAVKRSGEGSGAVERVVSQLLTEMDGIQPLTNVTIIAATNRPDI 685

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           I+ A+ R GR+DR + I              ++P    R EI +  +  + H+  D ++ 
Sbjct: 686 IDQAILRAGRIDRILYI--------------SLPDLPSRKEIFNIHMKKVPHT-DDIDIN 730

Query: 619 YLSMATHGFVGADLAALCNEAALVCLR 645
            L+  T G+ GA++A++C EA++  ++
Sbjct: 731 KLAEITDGYSGAEVASICREASICAMK 757


>gi|241646770|ref|XP_002411121.1| transitional endoplasmic reticulum ATPase, putative [Ixodes
            scapularis]
 gi|215503751|gb|EEC13245.1| transitional endoplasmic reticulum ATPase, putative [Ixodes
            scapularis]
          Length = 573

 Score =  312 bits (800), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 147/277 (53%), Positives = 203/277 (73%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            ++L + D   A  + +PSAMREV LE+PKV+W D+GG  EVK +L +AVEWP KH+EAF+
Sbjct: 269  VELNMADVAAALKRTKPSAMREVSLEIPKVRWSDIGGMEEVKLKLRQAVEWPWKHREAFE 328

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP G+L++GPPGCSKT++A+A+A+E+GLNF+A+K   LF  WVG+SE+AVR LF 
Sbjct: 329  RLGATPPHGLLLYGPPGCSKTMVAKALATESGLNFIAIKAGMLFLWWVGDSERAVRELFR 388

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP IIFFDEID LAA RG  S   +V DRV++QLL E+DG+    +V ++AATNR
Sbjct: 389  KARTAAPCIIFFDEIDALAAHRGSTSGSSNVGDRVIAQLLAEMDGIEALQDVVLVAATNR 448

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID AL+RPGR D ++YV  P+   R EI RI+L K P    V++ +LA  +EG +GA
Sbjct: 449  PDMIDQALMRPGRLDSIVYVPLPDLDTRREILRINLSKRPLGDGVSLDDLARKTEGYSGA 508

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            ++  +C+EAA+ A+EE+++A  I   HL+ A++ V P
Sbjct: 509  EVVAVCQEAALIALEEDIEARHIMALHLEAALQLVPP 545



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 160/256 (62%), Gaps = 22/256 (8%)

Query: 412 KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           ++GGL +E   L++++ + +   +T S  GL+P +G LL GPPGTGKT LAR  A +SG 
Sbjct: 25  QIGGLDREIQQLRELVEVPARHPATFSRFGLKPPRGALLFGPPGTGKTLLARAVAAESGA 84

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM 530
           +L  ++GP+V S+ YGE+E AL  VF  A + AP+V+F+DE+DA+ P R+ G      R 
Sbjct: 85  SLVVLDGPQVFSKYYGETEAALRNVFKDAVERAPSVLFVDEIDALCPKREAGTSSQEARA 144

Query: 531 VATLLNLMDGV--CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           V+TL+ L+D +   +   VLV+ ATNRP++++P+LR+PGRLDRE+EI             
Sbjct: 145 VSTLVALLDNLPPMQEKWVLVLGATNRPNNVDPSLRQPGRLDRELEI------------- 191

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA-----ALVC 643
             VP+ + RL+IL  +L  + HSL D ++   + A HG  GADLAA+C E      AL  
Sbjct: 192 -GVPTASGRLQILRKILGNVRHSLSDEDIVETADAAHGLTGADLAAMCAEGECFDTALHS 250

Query: 644 LRRYSKIQTSSDVLHS 659
           L R+ K  T++D + S
Sbjct: 251 LDRHLKDPTATDAVLS 266



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 99/225 (44%), Positives = 140/225 (62%), Gaps = 7/225 (3%)

Query: 771 KVKWEDVGG-QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           +  ++ +GG  RE++ QL E VE P +H   F R G +PP G L+FGPPG  KTL+ARAV
Sbjct: 20  RAGYDQIGGLDREIQ-QLRELVEVPARHPATFSRFGLKPPRGALLFGPPGTGKTLLARAV 78

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A+E+G + + + GP++FSK+ GE+E A+R++F  A   APS++F DEID L   R  E+ 
Sbjct: 79  AAESGASLVVLDGPQVFSKYYGETEAALRNVFKDAVERAPSVLFVDEIDALCPKR--EAG 136

Query: 890 GVSVSDRVMSQLLVELDGL--HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             S   R +S L+  LD L   Q   V V+ ATNRP+ +DP+L +PGR DR L +G P  
Sbjct: 137 TSSQEARAVSTLVALLDNLPPMQEKWVLVLGATNRPNNVDPSLRQPGRLDRELEIGVPTA 196

Query: 948 TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREA 991
           + R +I R  L  +  S SD +I E A  + G TGAD++ +C E 
Sbjct: 197 SGRLQILRKILGNVRHSLSDEDIVETADAAHGLTGADLAAMCAEG 241



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 19/215 (8%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           +     LG  P  G+LL+GPPG  KT +A+  A +SG+N   +    +     G+SE+A+
Sbjct: 324 REAFERLGATPPHGLLLYGPPGCSKTMVAKALATESGLNFIAIKAGMLFLWWVGDSERAV 383

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
            E+F  A  +AP ++F DE+DA+A  R    G   +  R++A LL  MDG+     V+++
Sbjct: 384 RELFRKARTAAPCIIFFDEIDALAAHRGSTSGSSNVGDRVIAQLLAEMDGIEALQDVVLV 443

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNRPD I+ AL RPGRLD  + + +              P    R EIL   LS  + 
Sbjct: 444 AATNRPDMIDQALMRPGRLDSIVYVPL--------------PDLDTRREILRINLS--KR 487

Query: 611 SLLDS-EVEYLSMATHGFVGADLAALCNEAALVCL 644
            L D   ++ L+  T G+ GA++ A+C EAAL+ L
Sbjct: 488 PLGDGVSLDDLARKTEGYSGAEVVAVCQEAALIAL 522


>gi|324510623|gb|ADY44442.1| Spermatogenesis-associated protein 5 [Ascaris suum]
          Length = 451

 Score =  312 bits (799), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 144/276 (52%), Positives = 200/276 (72%), Gaps = 1/276 (0%)

Query: 759  PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
            P+ +R+ +LEVP V+WED+GG  E+KT++ +AV WPQ H +AFKR G  PP+GIL++GPP
Sbjct: 173  PTGIRQFVLEVPDVQWEDIGGNDELKTEIQQAVIWPQLHADAFKRFGVEPPSGILLYGPP 232

Query: 819  GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
            GCSKTL+ARA+AS++ LNFLAVKGPELF+KWVGESE+AVR +F +AR  AP+I+FFDEID
Sbjct: 233  GCSKTLIARALASQSHLNFLAVKGPELFNKWVGESERAVREMFRRARQVAPAILFFDEID 292

Query: 879  GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDR 938
             +A IRG+ S G  V DRV++QLL ELDGL ++  V V+AATNRPD +D ALLRPGR DR
Sbjct: 293  AVAVIRGERS-GSGVGDRVLAQLLTELDGLEKKSGVLVLAATNRPDTLDSALLRPGRLDR 351

Query: 939  LLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE 998
             +YV  P+E  R  I R+H+ ++    DV++ EL   +   +GA+I  +CR+AA+ A+ E
Sbjct: 352  SIYVPLPDEKTRLSILRLHMNRMKIDEDVDLEELVTRTHRYSGAEIVALCRQAALIAMRE 411

Query: 999  NLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            ++ A  +  +H   +++ V P        +  KFQ+
Sbjct: 412  DITAEVVRRKHFLESLKVVVPRTDPGLLTIYEKFQK 447



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 126/208 (60%), Gaps = 16/208 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G+ P  G+LL+GPPG  KT +AR  A  S +N   V GPE+ ++  GESE+A+ E+F  
Sbjct: 218 FGVEPPSGILLYGPPGCSKTLIARALASQSHLNFLAVKGPELFNKWVGESERAVREMFRR 277

Query: 499 ASQSAPAVVFIDELDAIAPARKD-GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
           A Q APA++F DE+DA+A  R +  G  +  R++A LL  +DG+ +  GVLV+AATNRPD
Sbjct: 278 ARQVAPAILFFDEIDAVAVIRGERSGSGVGDRVLAQLLTELDGLEKKSGVLVLAATNRPD 337

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
           +++ AL RPGRLDR I + +              P    RL IL   ++ M+    D ++
Sbjct: 338 TLDSALLRPGRLDRSIYVPL--------------PDEKTRLSILRLHMNRMKID-EDVDL 382

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLR 645
           E L   TH + GA++ ALC +AAL+ +R
Sbjct: 383 EELVTRTHRYSGAEIVALCRQAALIAMR 410


>gi|448465914|ref|ZP_21598962.1| ATPase AAA [Halorubrum kocurii JCM 14978]
 gi|445814852|gb|EMA64809.1| ATPase AAA [Halorubrum kocurii JCM 14978]
          Length = 740

 Score =  312 bits (799), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 206/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E + Q+ E+VEWP    E F R+G   
Sbjct: 436  DFSGALTEVEPSAMREVLVELPKISWDDVGGLNEAQQQVQESVEWPLTSPEKFDRMGVDA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPSRGQEM-GNNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P++  RE+I  IH +  P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDQGGREQILDIHTQDTPLAPDVSLREIAEITDGYVGSDLEGIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ ++ DA  + M+H + A+  V+P+     +  Y+E+  +F+
Sbjct: 675  REAAIEALRDDDDAEEVEMKHFRRALESVRPTINDDILAYYEEVEEQFK 723



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F ++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +        S LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 131/226 (57%), Gaps = 24/226 (10%)

Query: 428 ISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
           +  SV+  L+S      +G+   KGVLL+GPPGTGKT +A+  A+++  N  +V GP+++
Sbjct: 474 VQESVEWPLTSPEKFDRMGVDAPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLL 533

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDG 540
           S+  GESE+A+ + F  A Q +P ++F DELD++AP+R ++ G  +S+R+V  LL  +DG
Sbjct: 534 SKWVGESEKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDG 593

Query: 541 VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI 600
           +     V+VI ATNRPD I+PAL R GR DR + I                P    R +I
Sbjct: 594 LEDMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI--------------GQPDQGGREQI 639

Query: 601 LHALLSGMEHSLL-DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           L   +   +  L  D  +  ++  T G+VG+DL  +  EAA+  LR
Sbjct: 640 LD--IHTQDTPLAPDVSLREIAEITDGYVGSDLEGIAREAAIEALR 683


>gi|448350148|ref|ZP_21538967.1| ATPase AAA [Natrialba taiwanensis DSM 12281]
 gi|445637655|gb|ELY90803.1| ATPase AAA [Natrialba taiwanensis DSM 12281]
          Length = 742

 Score =  312 bits (799), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 208/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG    K Q+ E+VEWP  + E F R+G  P
Sbjct: 436  DFRGALNEVEPSAMREVLVELPKITWDDVGGLHNAKDQVKESVEWPLNNPERFTRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEDMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH ++ P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDIEGRERILDIHTQETPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ +A+ + M+H + A+ +V+P+     +  Y+++  +F+
Sbjct: 675  REAAIEALREDHEANVVEMRHFRQAMENVRPTITDDILDYYEQIEDEFK 723



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILQIHTRGMPLSDDVNLSHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  + A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFRGALNEVEPS 447



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVNLSHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 22/214 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FTRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEDMEDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL   +   E  L
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDIEGRERILD--IHTQETPL 649

Query: 613 -LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 650 AADVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|240103746|ref|YP_002960055.1| AAA family ATPase [Thermococcus gammatolerans EJ3]
 gi|239911300|gb|ACS34191.1| AAA family ATPase, CDC48 subfamily (Cdc48) [Thermococcus
            gammatolerans EJ3]
          Length = 796

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 153/311 (49%), Positives = 212/311 (68%), Gaps = 21/311 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV+LEVP V+W+D+GG  +VK +L EAVEWP K+ EAF 
Sbjct: 485  LKVTRKDFYEALKMVEPSALREVLLEVPNVRWDDIGGLEDVKQELREAVEWPLKYPEAFM 544

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A+KGPE+ SKWVGESEK +R +F 
Sbjct: 545  GLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNIREIFR 604

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VI ATNR
Sbjct: 605  KARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRLINQLLTEMDGIQENSGVVVIGATNR 662

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+ V  P+E  R EIF++H RK+P + DVN+ ELA  +EG TGA
Sbjct: 663  PDILDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRKVPLAEDVNLEELAKRTEGYTGA 722

Query: 983  DISLICREAAISAIEENLDAS---------------RITMQHLKTAIRHVQPS----EIH 1023
            DI  + REAA+ A+   L                  ++TM+  + A++ + PS     + 
Sbjct: 723  DIEAVVREAAMLAMRRALQEGIIRPGMKADEIRRKVKVTMRDFEEALKKIGPSVSKETME 782

Query: 1024 SYKELSAKFQR 1034
             Y+++  +F++
Sbjct: 783  YYRKIQEQFKQ 793



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/234 (47%), Positives = 154/234 (65%), Gaps = 2/234 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG ++V  ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179  VTYEDIGGLKDVIQKVREMIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EA  +F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E+ G 
Sbjct: 239  EANAHFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKR-EETHG- 296

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV+SQLL  +DGL  R  V VIAATNRPD IDPAL RPGRFDR L VG P++  R+
Sbjct: 297  EVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGRFDRELEVGVPDKQGRK 356

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI 1005
            EI +IH R +P   D    ++  + E   G +      + AI  +E+  D   I
Sbjct: 357  EILQIHTRGMPIEPDFRRDKVIEILEKLRGDERFRDVIDRAIEKVEKAKDEEEI 410



 Score =  182 bits (462), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/304 (36%), Positives = 164/304 (53%), Gaps = 56/304 (18%)

Query: 310 SWLYSR----SLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNA 365
            WL+SR     ++ G+ + V +L +   F+V      PA +       Q+TE  D     
Sbjct: 114 EWLHSRLVGRPVVRGDYIKVGILGQELTFVVTATT--PAGIV------QITEFTD----- 160

Query: 366 FVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKD 425
           F ++ +       P+  V+K+                 AT+      +GGL      +++
Sbjct: 161 FQVSEK-------PVKEVAKT-----------------ATLGVTYEDIGGLKDVIQKVRE 196

Query: 426 II-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQN 484
           +I +          LG+ P KGVLL+GPPGTGKT LA+  A+++  +   +NGPE++S+ 
Sbjct: 197 MIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKY 256

Query: 485 YGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRT 544
           YGESE+ L EVF  A ++APA++FIDE+DAIAP R++   E+ +R+V+ LL LMDG+   
Sbjct: 257 YGESEERLREVFKEAEENAPAIIFIDEIDAIAPKREETHGEVEKRVVSQLLTLMDGLKSR 316

Query: 545 DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL 604
             V+VIAATNRPD+I+PALRRPGR DRE+E+               VP    R EIL   
Sbjct: 317 GKVIVIAATNRPDAIDPALRRPGRFDRELEV--------------GVPDKQGRKEILQIH 362

Query: 605 LSGM 608
             GM
Sbjct: 363 TRGM 366



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/211 (44%), Positives = 128/211 (60%), Gaps = 19/211 (9%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
            LG+ P KG+LL+GPPGTGKT LA+  A++S  N   + GPEV+S+  GESE+ + E+F 
Sbjct: 545 GLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNIREIFR 604

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            A Q+AP V+FIDE+DAIAP R      ++ R++  LL  MDG+    GV+VI ATNRPD
Sbjct: 605 KARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRLINQLLTEMDGIQENSGVVVIGATNRPD 664

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDS 615
            ++PAL RPGR DR I                 VP+P +  RLEI       +  +  D 
Sbjct: 665 ILDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRKVPLA-EDV 707

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            +E L+  T G+ GAD+ A+  EAA++ +RR
Sbjct: 708 NLEELAKRTEGYTGADIEAVVREAAMLAMRR 738


>gi|116753926|ref|YP_843044.1| AAA family ATPase, CDC48 subfamily protein [Methanosaeta thermophila
            PT]
 gi|116665377|gb|ABK14404.1| AAA family ATPase, CDC48 subfamily [Methanosaeta thermophila PT]
          Length = 721

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/306 (48%), Positives = 212/306 (69%), Gaps = 15/306 (4%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF  A  K+ PSAMREV++E+P+V W D+GG  + K  L EAVEWP  + EAF+
Sbjct: 415  LKVSREDFLAAMKKIEPSAMREVLVEIPEVHWSDIGGLEDAKQALREAVEWPIMYPEAFE 474

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G RPP G+L++GPPG  KT++ARAVA+E+G+NF+++KGPEL SKWVGESE+AVR +F 
Sbjct: 475  AVGIRPPRGVLLYGPPGTGKTMIARAVATESGINFISIKGPELMSKWVGESERAVREVFR 534

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+  AP++IFFDEID +   R    D   V++RV+SQLL E+DGL +  +V V+AATNR
Sbjct: 535  KAKQAAPALIFFDEIDSIVPARDSGRDS-HVTERVVSQLLTEIDGLVELKDVVVLAATNR 593

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDP+LLRPGRFDR++Y+  P+   R++IF I++RK+P + DVNI ELA  ++G TGA
Sbjct: 594  PDLIDPSLLRPGRFDRMIYIQMPDLAARKKIFEIYMRKMPVAGDVNIDELAARTDGYTGA 653

Query: 983  DISLICREAAISAIEENLDAS-----------RITMQHLKTAIRHVQPSEIHSYKELSAK 1031
            DI +ICREA + A+ E +              ++   H + A ++++P   H   E   +
Sbjct: 654  DIEMICREAGMLALREKIQPGMKRESLLLSQIQVRRDHFERAYQNIKP---HMPPETLKE 710

Query: 1032 FQRLVH 1037
            + R++ 
Sbjct: 711  YLRIME 716



 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/264 (43%), Positives = 167/264 (63%), Gaps = 18/264 (6%)

Query: 772  VKWEDVGG-QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            V +ED+GG  RE++  + E VE P +H E F+++G  PP G+L+ GPPG  KTL+ARAVA
Sbjct: 172  VTYEDIGGLSREIRA-IREMVELPLRHPEVFQKLGITPPKGVLLHGPPGTGKTLIARAVA 230

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE    F A+ GPE+ S++ GESE+ +R +F  A+ +APSIIF DEID +A  R +E  G
Sbjct: 231  SETDATFTAISGPEIMSRYYGESEQRLRQIFEDAQKSAPSIIFIDEIDSIAPKR-EEVLG 289

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              +  RV++QLL  +DGL  R  V VIAATNRP+ +DPAL R GRFDR + +G PN+  R
Sbjct: 290  -DLERRVVAQLLSLMDGLTSRGEVIVIAATNRPNALDPALRRGGRFDREVEIGIPNKNGR 348

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------- 997
             EI  +H R +P    +++ E+A ++ G  GAD++ +C+EAA+  I              
Sbjct: 349  LEILYVHTRGMPLDDSLDLSEIAEMTHGFVGADLASLCKEAAMHTISRILPDLDIEEEIP 408

Query: 998  -ENLDASRITMQHLKTAIRHVQPS 1020
             E LD  +++ +    A++ ++PS
Sbjct: 409  PEILDQLKVSREDFLAAMKKIEPS 432



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/255 (45%), Positives = 164/255 (64%), Gaps = 25/255 (9%)

Query: 396 QIE-FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPP 453
           QIE FQ    T E     +GGLS+E   +++++ +          LG+ P KGVLLHGPP
Sbjct: 163 QIEGFQFRDVTYED----IGGLSREIRAIREMVELPLRHPEVFQKLGITPPKGVLLHGPP 218

Query: 454 GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
           GTGKT +AR  A ++      ++GPE++S+ YGESEQ L ++F+ A +SAP+++FIDE+D
Sbjct: 219 GTGKTLIARAVASETDATFTAISGPEIMSRYYGESEQRLRQIFEDAQKSAPSIIFIDEID 278

Query: 514 AIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREI 573
           +IAP R++   +L +R+VA LL+LMDG+     V+VIAATNRP++++PALRR GR DRE+
Sbjct: 279 SIAPKREEVLGDLERRVVAQLLSLMDGLTSRGEVIVIAATNRPNALDPALRRGGRFDREV 338

Query: 574 EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLLDSEVEYLSMATHGFVGAD 631
           EI               +P+   RLEIL+    GM  + SL  SE+  +   THGFVGAD
Sbjct: 339 EI--------------GIPNKNGRLEILYVHTRGMPLDDSLDLSEIAEM---THGFVGAD 381

Query: 632 LAALCNEAALVCLRR 646
           LA+LC EAA+  + R
Sbjct: 382 LASLCKEAAMHTISR 396



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 146/243 (60%), Gaps = 19/243 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL      L++ +           ++G+RP +GVLL+GPPGTGKT +AR  A +SG
Sbjct: 447 SDIGGLEDAKQALREAVEWPIMYPEAFEAVGIRPPRGVLLYGPPGTGKTMIARAVATESG 506

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQ 528
           +N  ++ GPE++S+  GESE+A+ EVF  A Q+APA++F DE+D+I PAR  G +  +++
Sbjct: 507 INFISIKGPELMSKWVGESERAVREVFRKAKQAAPALIFFDEIDSIVPARDSGRDSHVTE 566

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V+ LL  +DG+     V+V+AATNRPD I+P+L RPGR DR I I M           
Sbjct: 567 RVVSQLLTEIDGLVELKDVVVLAATNRPDLIDPSLLRPGRFDRMIYIQM----------- 615

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
              P  A R +I    +  M  +  D  ++ L+  T G+ GAD+  +C EA ++ LR   
Sbjct: 616 ---PDLAARKKIFEIYMRKMPVA-GDVNIDELAARTDGYTGADIEMICREAGMLALR--E 669

Query: 649 KIQ 651
           KIQ
Sbjct: 670 KIQ 672


>gi|254166928|ref|ZP_04873782.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum boonei T469]
 gi|289596082|ref|YP_003482778.1| ATPase AAA [Aciduliprofundum boonei T469]
 gi|197624538|gb|EDY37099.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum boonei T469]
 gi|289533869|gb|ADD08216.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum boonei T469]
          Length = 727

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 212/298 (71%), Gaps = 13/298 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +++PS MREV++E P + W+D+GG  +VK +L E VEWP K+++ F  +  + 
Sbjct: 429  DFMDAYREMQPSTMREVLIEKPNIHWDDIGGLEQVKQELREVVEWPMKYRKLFAHMKVKI 488

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPG  KTL+A+AVA+E+  NF++VKGPE  SKWVGESEKAVR +F KAR  A
Sbjct: 489  PKGILLYGPPGTGKTLLAKAVATESEANFISVKGPEFLSKWVGESEKAVREVFRKARQAA 548

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IF DEID +A +RG++  G  V++RV+SQ+L E+DGL +  NVTVIAATNRPD +DP
Sbjct: 549  PAVIFIDEIDAIAPMRGRDI-GSHVTERVVSQILTEMDGLEELHNVTVIAATNRPDILDP 607

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDR++YV  P++  R+EIF+IHLR  P + DV+I +LA  +EG TGADI  +C
Sbjct: 608  ALLRPGRFDRIVYVPIPDKDARKEIFKIHLRGRPLAEDVDIDKLAEKTEGYTGADIEAVC 667

Query: 989  REAAISAIEENLDA---------SRITMQHLKTAIRHVQP---SEIHSYKELSAKFQR 1034
             EA I A+ E + +         ++I M+H + A++ V+P    E   Y+ +  +F++
Sbjct: 668  NEATILALREFIQSGKNPDEPKDAKIEMKHFEEALKKVKPLSKEEREMYERMVDRFRK 725



 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 115/264 (43%), Positives = 170/264 (64%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG +E   ++ E VE P +H E F+R+G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179  VTYEDIGGLKEEIKKIREMVELPLRHPELFERLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EA  +F+ + GPE+ SK+ G+SE+ +R +F +A+ NAPSIIF DEID +A  R + S   
Sbjct: 239  EANAHFIYLSGPEIMSKFYGQSEENLREIFKEAQDNAPSIIFIDEIDSIAPKRDEVSG-- 296

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNRP+ +DPAL RPGRFDR + +G P +  R+
Sbjct: 297  EVERRVVAQLLALMDGLESRGKVVVIGATNRPNALDPALRRPGRFDREIEIGIPGKNARK 356

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI  IH R +P + +V++ +LA ++ G  GAD++ + +EAA+ A+               
Sbjct: 357  EILEIHTRGVPLAENVDLEKLADMTHGYVGADLAALVKEAAMRALRRVIPEIDLEMEKIP 416

Query: 998  -ENLDASRITMQHLKTAIRHVQPS 1020
             E L+  ++T +    A R +QPS
Sbjct: 417  VEILEKLQVTWEDFMDAYREMQPS 440



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/250 (42%), Positives = 156/250 (62%), Gaps = 19/250 (7%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           E Q +     +DI   GGL +E   +++++ +          LG+ P KGVLL+GPPGTG
Sbjct: 172 ESQGISMVTYEDI---GGLKEEIKKIREMVELPLRHPELFERLGIEPPKGVLLYGPPGTG 228

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A+++  +   ++GPE++S+ YG+SE+ L E+F  A  +AP+++FIDE+D+IA
Sbjct: 229 KTLLAKAVANEANAHFIYLSGPEIMSKFYGQSEENLREIFKEAQDNAPSIIFIDEIDSIA 288

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R +   E+ +R+VA LL LMDG+     V+VI ATNRP++++PALRRPGR DREIEI 
Sbjct: 289 PKRDEVSGEVERRVVAQLLALMDGLESRGKVVVIGATNRPNALDPALRRPGRFDREIEI- 347

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                         +P    R EIL     G+  +  + ++E L+  THG+VGADLAAL 
Sbjct: 348 -------------GIPGKNARKEILEIHTRGVPLA-ENVDLEKLADMTHGYVGADLAALV 393

Query: 637 NEAALVCLRR 646
            EAA+  LRR
Sbjct: 394 KEAAMRALRR 403



 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/237 (40%), Positives = 144/237 (60%), Gaps = 17/237 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    L++++      +   + + ++  KG+LL+GPPGTGKT LA+  A +S  N
Sbjct: 457 IGGLEQVKQELREVVEWPMKYRKLFAHMKVKIPKGILLYGPPGTGKTLLAKAVATESEAN 516

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
             +V GPE +S+  GESE+A+ EVF  A Q+APAV+FIDE+DAIAP R +D G  +++R+
Sbjct: 517 FISVKGPEFLSKWVGESEKAVREVFRKARQAAPAVIFIDEIDAIAPMRGRDIGSHVTERV 576

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ +L  MDG+     V VIAATNRPD ++PAL RPGR DR + +               
Sbjct: 577 VSQILTEMDGLEELHNVTVIAATNRPDILDPALLRPGRFDRIVYV--------------P 622

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +P    R EI    L G   +  D +++ L+  T G+ GAD+ A+CNEA ++ LR +
Sbjct: 623 IPDKDARKEIFKIHLRGRPLA-EDVDIDKLAEKTEGYTGADIEAVCNEATILALREF 678


>gi|448440105|ref|ZP_21588353.1| ATPase AAA [Halorubrum saccharovorum DSM 1137]
 gi|445690622|gb|ELZ42832.1| ATPase AAA [Halorubrum saccharovorum DSM 1137]
          Length = 740

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 206/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG    K Q+ E+VEWP    E F R+G   
Sbjct: 436  DFSGALTEVEPSAMREVLVELPKISWDDVGGLSSAKEQVQESVEWPLTSPEKFDRMGVDA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPSRGQEM-GNNVSERVVNQLLTELDGLEEMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P++  RE+I  IH +  P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDQEGREQILDIHTQDTPLAPDVSLREIAEITDGYVGSDLEGIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ ++ DA  + M+H + A+  V+P+     +  Y+E+  +F+
Sbjct: 675  REAAIEALRDDDDAEEVEMKHFRRAMESVRPTINDDILAYYEEVEQQFK 723



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F ++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +        S LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 131/226 (57%), Gaps = 24/226 (10%)

Query: 428 ISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
           +  SV+  L+S      +G+   KGVLL+GPPGTGKT +A+  A+++  N  +V GP+++
Sbjct: 474 VQESVEWPLTSPEKFDRMGVDAPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLL 533

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDG 540
           S+  GESE+A+ + F  A Q +P ++F DELD++AP+R ++ G  +S+R+V  LL  +DG
Sbjct: 534 SKWVGESEKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDG 593

Query: 541 VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI 600
           +     V+VI ATNRPD I+PAL R GR DR + I                P    R +I
Sbjct: 594 LEEMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI--------------GQPDQEGREQI 639

Query: 601 LHALLSGMEHSLL-DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           L   +   +  L  D  +  ++  T G+VG+DL  +  EAA+  LR
Sbjct: 640 LD--IHTQDTPLAPDVSLREIAEITDGYVGSDLEGIAREAAIEALR 683


>gi|336476337|ref|YP_004615478.1| AAA ATPase [Methanosalsum zhilinae DSM 4017]
 gi|335929718|gb|AEH60259.1| AAA family ATPase, CDC48 subfamily [Methanosalsum zhilinae DSM 4017]
          Length = 744

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 206/291 (70%), Gaps = 14/291 (4%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L+++  DFE+A   + PSAMREV +EVP + W D+GG  + K +L EAVEWP K+ E F+
Sbjct: 417  LEVKKSDFEEALKNIEPSAMREVFVEVPHIDWNDIGGLDKAKQELREAVEWPLKYPELFE 476

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             + T+PP GI++FGPPG  KTL+A+AVASE+  NF+++KGPEL SK+VGESE+AVR  F 
Sbjct: 477  AVNTKPPRGIMLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAVRETFR 536

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+ +AP+++FFDE+D +A  RG  SD   VS+RV+SQ+L ELDG+ +  +V ++AATNR
Sbjct: 537  KAKQSAPTVVFFDEVDSIAPRRGMSSDS-HVSERVVSQILTELDGVEELKDVVIVAATNR 595

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV  P++  RE+IF IHL+  P S DV+I ELA ++E   GA
Sbjct: 596  PDIVDPALLRPGRFDRLIYVRSPDKKSREKIFSIHLKGKPLSDDVDISELAGMTEDYVGA 655

Query: 983  DISLICREAAISAI-------------EENLDASRITMQHLKTAIRHVQPS 1020
            DI  ICREA + A+             ++NL+   +   H K AI  ++P+
Sbjct: 656  DIESICREATMLALRDFIKPDMSKADMKQNLEKIVVNKSHFKRAISRIRPA 706



 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 113/280 (40%), Positives = 177/280 (63%), Gaps = 19/280 (6%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            +K +P+   E +++  ++ +ED+GG +     + E +E P +H E F+++G  PP G+L+
Sbjct: 160  LKEKPA---EEVVKTGQISYEDIGGLKREIGLVREMIELPLRHPELFQKLGIEPPKGVLL 216

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KT++A+AVASE   NF+++ GPE+ SK+ GESE+ +R +F +A  +AP+IIF 
Sbjct: 217  YGPPGTGKTMIAKAVASETDANFVSLSGPEIMSKYYGESEQKLREVFEEAERDAPTIIFI 276

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV++QLL  +DGL  R  V VIAATNRP+ ID AL R G
Sbjct: 277  DEIDSIAPKR-EEVTG-EVERRVVAQLLSLMDGLKTRGEVIVIAATNRPNSIDEALRRGG 334

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + +G P+   R +I  +H R +P   D+N+ ++A ++ G  GADIS + +EAA+ 
Sbjct: 335  RFDREIEIGIPDRNGRLQILYVHTRGMPLEKDLNLGDIADVTHGFVGADISSLAKEAAMH 394

Query: 995  A---------IEEN-----LDASRITMQHLKTAIRHVQPS 1020
            A         IEE+     +D   +     + A+++++PS
Sbjct: 395  ALRRILPEIKIEEDIPQEVMDKLEVKKSDFEEALKNIEPS 434



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/248 (43%), Positives = 159/248 (64%), Gaps = 21/248 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLL+GPPGTGKT +A+  A ++  N
Sbjct: 179 IGGLKREIGLVREMIELPLRHPELFQKLGIEPPKGVLLYGPPGTGKTMIAKAVASETDAN 238

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESEQ L EVF+ A + AP ++FIDE+D+IAP R++   E+ +R+V
Sbjct: 239 FVSLSGPEIMSKYYGESEQKLREVFEEAERDAPTIIFIDEIDSIAPKREEVTGEVERRVV 298

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VIAATNRP+SI+ ALRR GR DREIEI               +
Sbjct: 299 AQLLSLMDGLKTRGEVIVIAATNRPNSIDEALRRGGRFDREIEI--------------GI 344

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRY-S 648
           P    RL+IL+    GM    L+ ++    +A  THGFVGAD+++L  EAA+  LRR   
Sbjct: 345 PDRNGRLQILYVHTRGMP---LEKDLNLGDIADVTHGFVGADISSLAKEAAMHALRRILP 401

Query: 649 KIQTSSDV 656
           +I+   D+
Sbjct: 402 EIKIEEDI 409



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 138/243 (56%), Gaps = 17/243 (6%)

Query: 409 DISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           D + +GGL K    L++ +           ++  +P +G++L GPPGTGKT LA+  A +
Sbjct: 447 DWNDIGGLDKAKQELREAVEWPLKYPELFEAVNTKPPRGIMLFGPPGTGKTLLAKAVASE 506

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-EL 526
           S  N  ++ GPE++S+  GESE+A+ E F  A QSAP VVF DE+D+IAP R    +  +
Sbjct: 507 SEANFISIKGPELLSKYVGESERAVRETFRKAKQSAPTVVFFDEVDSIAPRRGMSSDSHV 566

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           S+R+V+ +L  +DGV     V+++AATNRPD ++PAL RPGR DR I +           
Sbjct: 567 SERVVSQILTELDGVEELKDVVIVAATNRPDIVDPALLRPGRFDRLIYV----------- 615

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                P    R +I    L G   S  D ++  L+  T  +VGAD+ ++C EA ++ LR 
Sbjct: 616 ---RSPDKKSREKIFSIHLKGKPLS-DDVDISELAGMTEDYVGADIESICREATMLALRD 671

Query: 647 YSK 649
           + K
Sbjct: 672 FIK 674


>gi|448377744|ref|ZP_21560440.1| ATPase AAA [Halovivax asiaticus JCM 14624]
 gi|445655688|gb|ELZ08533.1| ATPase AAA [Halovivax asiaticus JCM 14624]
          Length = 742

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/282 (52%), Positives = 202/282 (71%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PKV W+DVGG  E K Q+ E+VEWP    E F R+G  P
Sbjct: 436  DFGGALNEVEPSAMREVLVELPKVSWDDVGGLHEAKEQVQESVEWPLNDPEKFGRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E  G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGEV-GSNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH   +P ++DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDTDGRERILEIHTEDMPLAADVSLREIAEITDGYVGSDLESIG 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ ++ +A  + M+H + A+ +V+P+   +I  Y E
Sbjct: 675  REAAIEALRDDDEAEVVEMRHFRQALENVRPTITEDILEYYE 716



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 110/229 (48%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVNLSRLADDTHGFVGADIESLTKEAAMKALRRYL 412



 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVNLSRLADDTHGFVGADIESLTKEAAMKALRRY 411



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FGRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+     V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGEVGSNVSERVVNQLLTELDGLEDMGDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL      M  + 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDTDGRERILEIHTEDMPLA- 650

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 651 ADVSLREIAEITDGYVGSDLESIGREAAIEALR 683


>gi|325959789|ref|YP_004291255.1| AAA ATPase [Methanobacterium sp. AL-21]
 gi|325331221|gb|ADZ10283.1| AAA family ATPase, CDC48 subfamily [Methanobacterium sp. AL-21]
          Length = 729

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/272 (52%), Positives = 197/272 (72%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A  +V+PSA+REV+++VP VKW+D+GG    K +L EAVEWP K+ E+F++ G RP
Sbjct: 449  DFKEALKEVQPSALREVLVQVPDVKWDDIGGLTSAKQELQEAVEWPLKYPESFEKFGVRP 508

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+E+  NF+AVKGPEL SKWVGESEK VR +F KAR  A
Sbjct: 509  PRGVLIYGPPGTGKTLLAKAVANESDANFIAVKGPELLSKWVGESEKGVREVFRKARQTA 568

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A+ R   S    V+ RV++QLL E+DGL +  +V VIAATNR D +DP
Sbjct: 569  PTVIFFDEIDSIASARSGSSTDSGVTQRVVNQLLTEIDGLEELQDVAVIAATNRVDILDP 628

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL RPGRFDR + V  P+ET R  IF +H + +P + DV++  L+  + G  GADI  +C
Sbjct: 629  ALTRPGRFDRHVKVDDPDETARLSIFEVHTKDMPLAEDVDLEVLSKRTHGFVGADIEAVC 688

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REA +  + EN+ +  + M+H + AI+ V+P 
Sbjct: 689  REAVMLTLRENIKSELVDMKHFQEAIKKVKPK 720



 Score =  213 bits (542), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/289 (42%), Positives = 174/289 (60%), Gaps = 17/289 (5%)

Query: 746  ELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIG 805
            E+ D E     V  S + E +  V  V +ED+GG +E   ++ E +E P K  E F+R+G
Sbjct: 175  EMTDVEVQTEPVDVSKL-EGVKNVVDVTYEDIGGLKEEVKKVREMIEIPLKRPELFERLG 233

Query: 806  TRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR 865
              PP G+LM GPPG  KTL+A+AVA+E+  +F+A+ GPE+ SK+VG SE+ +R LF +A 
Sbjct: 234  IAPPKGVLMHGPPGTGKTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLRELFEEAE 293

Query: 866  ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDK 925
             NAPSIIF DEID +A  R +E  G  V  R ++QLL  +DGL  R  V VI ATNRPD 
Sbjct: 294  ENAPSIIFIDEIDAIAPKR-EEVSG-EVERRTVAQLLTLMDGLKSRGQVVVIGATNRPDA 351

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADIS 985
            +D A+ R GRFDR + +G P++  R E+ +IH R +P    V++ E+A ++ G  GAD+ 
Sbjct: 352  LDAAIRRGGRFDREIEIGVPDKDGRGEVLQIHTRGMPLDDKVDLEEMADITHGFVGADLE 411

Query: 986  LICREAAISAI--------------EENLDASRITMQHLKTAIRHVQPS 1020
             +C+EAA+  +              +E L    +T    K A++ VQPS
Sbjct: 412  SLCKEAAMRVLRRVLPDIKGDEEISKETLKKMIVTKTDFKEALKEVQPS 460



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/252 (44%), Positives = 155/252 (61%), Gaps = 20/252 (7%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           + + V+  V+     +GGL +E   ++++I I          LG+ P KGVL+HGPPGTG
Sbjct: 190 KLEGVKNVVDVTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGIAPPKGVLMHGPPGTG 249

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A++S  +   +NGPE++S+  G SE+ L E+F+ A ++AP+++FIDE+DAIA
Sbjct: 250 KTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLRELFEEAEENAPSIIFIDEIDAIA 309

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R++   E+ +R VA LL LMDG+     V+VI ATNRPD+++ A+RR GR DREIEI 
Sbjct: 310 PKREEVSGEVERRTVAQLLTLMDGLKSRGQVVVIGATNRPDALDAAIRRGGRFDREIEI- 368

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAA 634
                         VP    R E+L     GM    LD +V+   MA  THGFVGADL +
Sbjct: 369 -------------GVPDKDGRGEVLQIHTRGMP---LDDKVDLEEMADITHGFVGADLES 412

Query: 635 LCNEAALVCLRR 646
           LC EAA+  LRR
Sbjct: 413 LCKEAAMRVLRR 424



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/219 (43%), Positives = 130/219 (59%), Gaps = 21/219 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           +    G+RP +GVL++GPPGTGKT LA+  A++S  N   V GPE++S+  GESE+ + E
Sbjct: 500 SFEKFGVRPPRGVLIYGPPGTGKTLLAKAVANESDANFIAVKGPELLSKWVGESEKGVRE 559

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           VF  A Q+AP V+F DE+D+IA AR     D G  ++QR+V  LL  +DG+     V VI
Sbjct: 560 VFRKARQTAPTVIFFDEIDSIASARSGSSTDSG--VTQRVVNQLLTEIDGLEELQDVAVI 617

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNR D ++PAL RPGR DR +++D               P    RL I       M  
Sbjct: 618 AATNRVDILDPALTRPGRFDRHVKVDD--------------PDETARLSIFEVHTKDMPL 663

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           +  D ++E LS  THGFVGAD+ A+C EA ++ LR   K
Sbjct: 664 A-EDVDLEVLSKRTHGFVGADIEAVCREAVMLTLRENIK 701


>gi|254168540|ref|ZP_04875384.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum boonei T469]
 gi|197622595|gb|EDY35166.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum boonei T469]
          Length = 727

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 148/298 (49%), Positives = 212/298 (71%), Gaps = 13/298 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +++PS MREV++E P + W+D+GG  +VK +L E VEWP K+++ F  +  + 
Sbjct: 429  DFMDAYREMQPSTMREVLIEKPNIHWDDIGGLEQVKQELREVVEWPMKYRKLFAHMKVKI 488

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPG  KTL+A+AVA+E+  NF++VKGPE  SKWVGESEKAVR +F KAR  A
Sbjct: 489  PKGILLYGPPGTGKTLLAKAVATESEANFISVKGPEFLSKWVGESEKAVREVFRKARQAA 548

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IF DEID +A +RG++  G  V++RV+SQ+L E+DGL +  NVTVIAATNRPD +DP
Sbjct: 549  PAVIFIDEIDAIAPMRGRDI-GSHVTERVVSQILTEMDGLEELHNVTVIAATNRPDILDP 607

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDR++YV  P++  R+EIF+IHLR  P + DV+I +LA  +EG TGADI  +C
Sbjct: 608  ALLRPGRFDRIVYVPIPDKDARKEIFKIHLRGRPLAEDVDIDKLAEKTEGYTGADIEAVC 667

Query: 989  REAAISAIEENLDA---------SRITMQHLKTAIRHVQP---SEIHSYKELSAKFQR 1034
             EA I A+ E + +         ++I M+H + A++ ++P    E   Y+ +  +F++
Sbjct: 668  NEATILALREFIQSGKNPDEPKDAKIEMKHFEEALKKIKPLSKEEREMYERMVDRFRK 725



 Score =  232 bits (592), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 170/264 (64%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG +E   ++ E VE P +H E F+R+G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179  VTYEDIGGLKEEIKKIREMVELPLRHPELFERLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EA  +F+ + GPE+ SK+ G+SE+ +R +F +A+ NAPSIIF DEID +A  R + S   
Sbjct: 239  EANAHFIYLSGPEIMSKFYGQSEENLREIFKEAQDNAPSIIFIDEIDSIAPKRDEVSG-- 296

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNRP+ +DPAL RPGRFDR + +G P +  R+
Sbjct: 297  EVERRVVAQLLALMDGLESRGKVVVIGATNRPNALDPALRRPGRFDREIEIGIPGKNARK 356

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI  IH R +P + DV++ +LA ++ G  GAD++ + +EAA+ A+               
Sbjct: 357  EILEIHTRGVPLAEDVDLEKLADMTHGYVGADLAALVKEAAMRALRRVIPEIDLEMEKIP 416

Query: 998  -ENLDASRITMQHLKTAIRHVQPS 1020
             E L+  ++T +    A R +QPS
Sbjct: 417  VEILEKLQVTWEDFMDAYREMQPS 440



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/250 (43%), Positives = 156/250 (62%), Gaps = 19/250 (7%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           E Q +     +DI   GGL +E   +++++ +          LG+ P KGVLL+GPPGTG
Sbjct: 172 ESQGISMVTYEDI---GGLKEEIKKIREMVELPLRHPELFERLGIEPPKGVLLYGPPGTG 228

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A+++  +   ++GPE++S+ YG+SE+ L E+F  A  +AP+++FIDE+D+IA
Sbjct: 229 KTLLAKAVANEANAHFIYLSGPEIMSKFYGQSEENLREIFKEAQDNAPSIIFIDEIDSIA 288

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R +   E+ +R+VA LL LMDG+     V+VI ATNRP++++PALRRPGR DREIEI 
Sbjct: 289 PKRDEVSGEVERRVVAQLLALMDGLESRGKVVVIGATNRPNALDPALRRPGRFDREIEI- 347

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                         +P    R EIL     G+  +  D ++E L+  THG+VGADLAAL 
Sbjct: 348 -------------GIPGKNARKEILEIHTRGVPLA-EDVDLEKLADMTHGYVGADLAALV 393

Query: 637 NEAALVCLRR 646
            EAA+  LRR
Sbjct: 394 KEAAMRALRR 403



 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/237 (40%), Positives = 144/237 (60%), Gaps = 17/237 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    L++++      +   + + ++  KG+LL+GPPGTGKT LA+  A +S  N
Sbjct: 457 IGGLEQVKQELREVVEWPMKYRKLFAHMKVKIPKGILLYGPPGTGKTLLAKAVATESEAN 516

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
             +V GPE +S+  GESE+A+ EVF  A Q+APAV+FIDE+DAIAP R +D G  +++R+
Sbjct: 517 FISVKGPEFLSKWVGESEKAVREVFRKARQAAPAVIFIDEIDAIAPMRGRDIGSHVTERV 576

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ +L  MDG+     V VIAATNRPD ++PAL RPGR DR + +               
Sbjct: 577 VSQILTEMDGLEELHNVTVIAATNRPDILDPALLRPGRFDRIVYV--------------P 622

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +P    R EI    L G   +  D +++ L+  T G+ GAD+ A+CNEA ++ LR +
Sbjct: 623 IPDKDARKEIFKIHLRGRPLA-EDVDIDKLAEKTEGYTGADIEAVCNEATILALREF 678


>gi|288559692|ref|YP_003423178.1| cell division control protein Cdc48 [Methanobrevibacter ruminantium
            M1]
 gi|288542402|gb|ADC46286.1| cell division control protein Cdc48 [Methanobrevibacter ruminantium
            M1]
          Length = 735

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 140/272 (51%), Positives = 197/272 (72%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A+ +++PSA+REV+++VP V W+DVGG  + K +L EAVEWP K+   FK  G RP
Sbjct: 453  DFKSAQREIQPSALREVLVQVPNVTWDDVGGLDDAKQELKEAVEWPLKYPNKFKEFGVRP 512

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G L++G PG  KT++A+AVA+E+  NF+A+KGPEL SKWVGESEK VR +F KAR  A
Sbjct: 513  PKGTLLYGIPGTGKTMLAKAVANESEANFIAIKGPELLSKWVGESEKGVREVFRKARQTA 572

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A+ RG ES    V+ RV++QLL E+DGL +  +V +IAATNRPD IDP
Sbjct: 573  PTVIFFDEIDSIASSRGGESGDSGVTKRVVNQLLTEIDGLEELEDVAIIAATNRPDIIDP 632

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
             L+RPGRFDR + V  PNE  R  IF++H + +P + DV +++LA  +EG  GADI  +C
Sbjct: 633  GLMRPGRFDRHIKVDAPNEDARLAIFKVHTKDMPLAKDVKLKKLAKRAEGYVGADIEAVC 692

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAA+ A+ ++++A  ++ +    A+  V+P 
Sbjct: 693  REAAMLALRDDIEAKEVSAKFFDEAMDKVKPK 724



 Score =  213 bits (542), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 169/266 (63%), Gaps = 16/266 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + ++D+GG +E   ++ E +E P K  E F+++G  PP G+LM GPPG  KTL+A+AVA+
Sbjct: 204  ISYDDIGGLKEEVKKVREMIEIPLKKPELFEKLGISPPKGVLMHGPPGTGKTLLAKAVAN 263

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F+ + GPE+ SK+VG SE+ +R  F +A  NAPSIIF DE+D +A  R +E++G 
Sbjct: 264  ESDAHFIVINGPEIMSKYVGGSEENLREFFEEAEENAPSIIFIDELDAIAPKR-EETNG- 321

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R ++QLL  +DGL+ R  V VI ATNRPD +D AL RPGRFDR + +G P++ +R+
Sbjct: 322  EVERRTVAQLLTLMDGLNSRGQVVVIGATNRPDSLDGALRRPGRFDREIEIGVPDKDERK 381

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI  IH R +P + DV++ ++A  + G  GAD+  + +EAA+  +               
Sbjct: 382  EIMEIHTRGMPLAEDVDLDQIANTTHGFVGADLEALAKEAAMRVVRRIIPDLGSDDEIPP 441

Query: 998  ENLDASRITMQHLKTAIRHVQPSEIH 1023
            E L+   +T +  K+A R +QPS + 
Sbjct: 442  EVLEKLVVTKEDFKSAQREIQPSALR 467



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/250 (44%), Positives = 154/250 (61%), Gaps = 16/250 (6%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           + + V   V+     +GGL +E   ++++I I          LG+ P KGVL+HGPPGTG
Sbjct: 194 KLEGVSNLVDISYDDIGGLKEEVKKVREMIEIPLKKPELFEKLGISPPKGVLMHGPPGTG 253

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A++S  +   +NGPE++S+  G SE+ L E F+ A ++AP+++FIDELDAIA
Sbjct: 254 KTLLAKAVANESDAHFIVINGPEIMSKYVGGSEENLREFFEEAEENAPSIIFIDELDAIA 313

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R++   E+ +R VA LL LMDG+     V+VI ATNRPDS++ ALRRPGR DREIEI 
Sbjct: 314 PKREETNGEVERRTVAQLLTLMDGLNSRGQVVVIGATNRPDSLDGALRRPGRFDREIEI- 372

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                         VP   +R EI+     GM  +  D +++ ++  THGFVGADL AL 
Sbjct: 373 -------------GVPDKDERKEIMEIHTRGMPLA-EDVDLDQIANTTHGFVGADLEALA 418

Query: 637 NEAALVCLRR 646
            EAA+  +RR
Sbjct: 419 KEAAMRVVRR 428



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 90/216 (41%), Positives = 129/216 (59%), Gaps = 21/216 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           +     G+RP KG LL+G PGTGKT LA+  A++S  N   + GPE++S+  GESE+ + 
Sbjct: 503 NKFKEFGVRPPKGTLLYGIPGTGKTMLAKAVANESEANFIAIKGPELLSKWVGESEKGVR 562

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEE----LSQRMVATLLNLMDGVCRTDGVLV 549
           EVF  A Q+AP V+F DE+D+IA +R  GGE     +++R+V  LL  +DG+   + V +
Sbjct: 563 EVFRKARQTAPTVIFFDEIDSIASSR--GGESGDSGVTKRVVNQLLTEIDGLEELEDVAI 620

Query: 550 IAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME 609
           IAATNRPD I+P L RPGR DR I++D               P+   RL I       M 
Sbjct: 621 IAATNRPDIIDPGLMRPGRFDRHIKVD--------------APNEDARLAIFKVHTKDMP 666

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            +  D +++ L+    G+VGAD+ A+C EAA++ LR
Sbjct: 667 LA-KDVKLKKLAKRAEGYVGADIEAVCREAAMLALR 701


>gi|320101277|ref|YP_004176869.1| AAA ATPase [Desulfurococcus mucosus DSM 2162]
 gi|319753629|gb|ADV65387.1| AAA family ATPase, CDC48 subfamily [Desulfurococcus mucosus DSM 2162]
          Length = 730

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 145/280 (51%), Positives = 202/280 (72%), Gaps = 1/280 (0%)

Query: 741  CALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEA 800
             ++K+   DF  A   + PS +RE+ +EVP V+W D+GG  EVK  L E VE P KH E 
Sbjct: 421  SSIKVTFEDFLFAYRSIVPSGLREIHVEVPDVRWSDIGGLEEVKRSLRENVELPLKHPEI 480

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
            +++ G +PP G+L++GPPGC KTL+A+AVA+E+G NF+AVKGPE+ SKWVGESEKAVR +
Sbjct: 481  YEKYGIKPPKGVLLYGPPGCGKTLLAKAVATESGANFIAVKGPEVLSKWVGESEKAVREI 540

Query: 861  FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
            F KAR  AP ++FFDEID +A++RG ++D   VS+RV++QL+ E+DG+ +  NV V+AAT
Sbjct: 541  FRKARLYAPVVVFFDEIDAIASLRGIDTDS-GVSERVVTQLVTEMDGVQKLENVVVLAAT 599

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD +DPALLRPGRFD+L+YV PP+   R EI R+H R +P   DV++ ELA  +EG +
Sbjct: 600  NRPDLLDPALLRPGRFDKLIYVPPPDYNARLEILRVHTRSVPLDRDVDLAELARSTEGYS 659

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            GAD+  + REA + A+ E+    R+  +H   A+  V+PS
Sbjct: 660  GADLEAVVREAVMLALRESPFIERVGRKHFIGALELVKPS 699



 Score =  211 bits (537), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/285 (40%), Positives = 174/285 (61%), Gaps = 27/285 (9%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E + E P+V ++D+GG   V  ++ E +E P K+++ F+++G  PP GIL++GPPG  KT
Sbjct: 164  EPVGEFPRVTFDDIGGLGNVIDKIREMIEIPLKYRKVFRKLGVDPPKGILLYGPPGTGKT 223

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA---PSIIFFDEIDGL 880
            L+A+A+A+E    F+ + GPE+ SK+ GESE+ +R +F  AR  +   P+IIF DEID +
Sbjct: 224  LLAKALANEVNAYFITINGPEIMSKYYGESEQRLREIFKLARKKSKKNPAIIFIDEIDAI 283

Query: 881  AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLL 940
            A  R  E  G  V  RV++QLL  +DGL  R NV VIAATNRP+ +DPAL RPGRFDR +
Sbjct: 284  APKR-DEVIG-EVERRVVAQLLALMDGLESRGNVIVIAATNRPNALDPALRRPGRFDREI 341

Query: 941  YVGPPNETDREEIFRIHLRKIP----CSSDVNIRELACLSEGCTGADISLICREAAISAI 996
             +  P++  R EI +IH R++      S DV++ ++A ++ G TGAD++ + +EA + AI
Sbjct: 342  EIPMPDKKGRLEILKIHTRRLSELGVLSRDVDLAKIAEITHGYTGADLAALVKEAVLHAI 401

Query: 997  EEN---------------LDASRITMQHLKTAIRHVQPS---EIH 1023
                              L + ++T +    A R + PS   EIH
Sbjct: 402  RRQVRLDTPGEWPPPDDLLSSIKVTFEDFLFAYRSIVPSGLREIH 446



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/266 (43%), Positives = 158/266 (59%), Gaps = 27/266 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      ++++I I    +     LG+ P KG+LL+GPPGTGKT LA+  A++    
Sbjct: 177 IGGLGNVIDKIREMIEIPLKYRKVFRKLGVDPPKGILLYGPPGTGKTLLAKALANEVNAY 236

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSA---SQSAPAVVFIDELDAIAPARKDGGEELSQ 528
             T+NGPE++S+ YGESEQ L E+F  A   S+  PA++FIDE+DAIAP R +   E+ +
Sbjct: 237 FITINGPEIMSKYYGESEQRLREIFKLARKKSKKNPAIIFIDEIDAIAPKRDEVIGEVER 296

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+VA LL LMDG+     V+VIAATNRP++++PALRRPGR DREIEI M           
Sbjct: 297 RVVAQLLALMDGLESRGNVIVIAATNRPNALDPALRRPGRFDREIEIPM----------- 345

Query: 589 AAVPSPAQRLEILHALLSGM-EHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
              P    RLEIL      + E  +L  +V+   +A  THG+ GADLAAL  EA L  +R
Sbjct: 346 ---PDKKGRLEILKIHTRRLSELGVLSRDVDLAKIAEITHGYTGADLAALVKEAVLHAIR 402

Query: 646 RYSKIQT------SSDVLHSTGTLFE 665
           R  ++ T        D+L S    FE
Sbjct: 403 RQVRLDTPGEWPPPDDLLSSIKVTFE 428



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/241 (41%), Positives = 140/241 (58%), Gaps = 25/241 (10%)

Query: 411 SKLGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL + + ++ +++ +           G++P KGVLL+GPPG GKT LA+  A +SG
Sbjct: 455 SDIGGLEEVKRSLRENVELPLKHPEIYEKYGIKPPKGVLLYGPPGCGKTLLAKAVATESG 514

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQ 528
            N   V GPEV+S+  GESE+A+ E+F  A   AP VVF DE+DAIA  R  D    +S+
Sbjct: 515 ANFIAVKGPEVLSKWVGESEKAVREIFRKARLYAPVVVFFDEIDAIASLRGIDTDSGVSE 574

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V  L+  MDGV + + V+V+AATNRPD ++PAL RPGR D+ I               
Sbjct: 575 RVVTQLVTEMDGVQKLENVVVLAATNRPDLLDPALLRPGRFDKLI--------------- 619

Query: 589 AAVPSPAQ--RLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCL 644
             VP P    RLEIL      +    LD +V+   L+ +T G+ GADL A+  EA ++ L
Sbjct: 620 -YVPPPDYNARLEILRVHTRSVP---LDRDVDLAELARSTEGYSGADLEAVVREAVMLAL 675

Query: 645 R 645
           R
Sbjct: 676 R 676


>gi|84489878|ref|YP_448110.1| CdcH [Methanosphaera stadtmanae DSM 3091]
 gi|84373197|gb|ABC57467.1| CdcH [Methanosphaera stadtmanae DSM 3091]
          Length = 730

 Score =  311 bits (796), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 143/280 (51%), Positives = 202/280 (72%), Gaps = 3/280 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +++PSA+REV++++P V W+DVGG  + K +L EA+EWP K+ E FK  G  P
Sbjct: 450  DFKNALKEIQPSALREVLVQIPDVNWDDVGGLDDAKQELKEAIEWPLKNPEKFKEFGINP 509

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+ G PG  KTL+A+AVA+E+  NF++VKGPEL SKWVG+SEK +R +F KAR  A
Sbjct: 510  PKGVLLTGVPGTGKTLLAKAVANESDANFISVKGPELLSKWVGDSEKGIREVFRKARQTA 569

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A+ RG  +    V+ RV++QLL E+DG+ +  +++VIAATNR D IDP
Sbjct: 570  PTVIFFDEIDAIASTRGYSAGDSGVTQRVVNQLLTEMDGMEELHDISVIAATNRKDIIDP 629

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDR + VG P+E  RE IF++H + +P S DV+I  LA  +EG  GADI  +C
Sbjct: 630  ALLRPGRFDRHVEVGLPDEESRESIFKVHTKNMPLSDDVDIHTLAKEAEGFVGADIEAVC 689

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQP---SEIHSY 1025
            REA +  + +NL+A+ + M   + A++ V+P   SE+ SY
Sbjct: 690  REAVMLTLRKNLEANIVHMSEFEEAMKKVKPTKDSELVSY 729



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 113/263 (42%), Positives = 163/263 (61%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG +    ++ E VE P K  E FK++G   P G+L+ GPPG  KTL+A+AVA+
Sbjct: 201  VSYEDIGGLKNEVKKIREMVEIPLKRPELFKQLGISAPKGVLLHGPPGTGKTLLAKAVAN 260

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F+ + GPE+ SK+VG SE+ +R LF +A  N+PSIIF DE+D +A  R +E  G 
Sbjct: 261  ETNAHFIVINGPEIMSKYVGGSEEQLRELFEEAEENSPSIIFIDELDAIAPKR-EEVSG- 318

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R ++QLL  +DGL  R  V VI ATNRPD ID AL RPGRFDR + +G P++ +R+
Sbjct: 319  DVERRTVAQLLTLMDGLKSRGEVVVIGATNRPDAIDAALRRPGRFDREIEIGVPDKEERK 378

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI  +H R +P   DVN+ EL  ++ G  GAD+  +C+EAA+  +              +
Sbjct: 379  EILEVHTRHMPLDDDVNLDELTEVTHGFVGADLEALCKEAAMRVLRRILPEIQTDKEVPQ 438

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E L+   +  +  K A++ +QPS
Sbjct: 439  EVLEKMVLHKKDFKNALKEIQPS 461



 Score =  211 bits (537), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 189/341 (55%), Gaps = 33/341 (9%)

Query: 332 SIFLVIGANKLPADLTNERSQPQVTESM--DHESNAFVINH----ETKVYLY--PPLNAV 383
           S+FL    NK    +T  R Q   T SM  D   N  + N     E K+ +    PL  V
Sbjct: 113 SVFLNRTVNKGDIIITGVRKQQPKTSSMMFDDLINQMMSNMASIGEIKLAVVNTKPLGPV 172

Query: 384 ----SKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSS 438
               +  +   T P    +F+ V+  ++     +GGL  E   +++++ I          
Sbjct: 173 KITENTQIEMETKPVDPSKFEGVENLIDVSYEDIGGLKNEVKKIREMVEIPLKRPELFKQ 232

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+   KGVLLHGPPGTGKT LA+  A+++  +   +NGPE++S+  G SE+ L E+F+ 
Sbjct: 233 LGISAPKGVLLHGPPGTGKTLLAKAVANETNAHFIVINGPEIMSKYVGGSEEQLRELFEE 292

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A +++P+++FIDELDAIAP R++   ++ +R VA LL LMDG+     V+VI ATNRPD+
Sbjct: 293 AEENSPSIIFIDELDAIAPKREEVSGDVERRTVAQLLTLMDGLKSRGEVVVIGATNRPDA 352

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV- 617
           I+ ALRRPGR DREIEI               VP   +R EIL        H  LD +V 
Sbjct: 353 IDAALRRPGRFDREIEI--------------GVPDKEERKEILEV---HTRHMPLDDDVN 395

Query: 618 -EYLSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDV 656
            + L+  THGFVGADL ALC EAA+  LRR   +IQT  +V
Sbjct: 396 LDELTEVTHGFVGADLEALCKEAAMRVLRRILPEIQTDKEV 436



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/213 (42%), Positives = 121/213 (56%), Gaps = 17/213 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P KGVLL G PGTGKT LA+  A++S  N  +V GPE++S+  G+SE+ + EV
Sbjct: 502 FKEFGINPPKGVLLTGVPGTGKTLLAKAVANESDANFISVKGPELLSKWVGDSEKGIREV 561

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q+AP V+F DE+DAIA  R    G   ++QR+V  LL  MDG+     + VIAAT
Sbjct: 562 FRKARQTAPTVIFFDEIDAIASTRGYSAGDSGVTQRVVNQLLTEMDGMEELHDISVIAAT 621

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NR D I+PAL RPGR DR +E+               +P    R  I       M  S  
Sbjct: 622 NRKDIIDPALLRPGRFDRHVEV--------------GLPDEESRESIFKVHTKNMPLS-D 666

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           D ++  L+    GFVGAD+ A+C EA ++ LR+
Sbjct: 667 DVDIHTLAKEAEGFVGADIEAVCREAVMLTLRK 699


>gi|389852490|ref|YP_006354724.1| cell division control protein 48, aaa family [Pyrococcus sp. ST04]
 gi|388249796|gb|AFK22649.1| putative cell division control protein 48, aaa family [Pyrococcus sp.
            ST04]
          Length = 837

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/307 (49%), Positives = 212/307 (69%), Gaps = 17/307 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV++EVP V W+D+GG  +VK +L EAVEWP K  +AFK
Sbjct: 513  LKVTKQDFYEALKMVEPSALREVLIEVPNVHWDDIGGLEDVKQELREAVEWPLKFPKAFK 572

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G  PP GIL++GPPG  KTL+A+A+A+E+  NF+A++GPE+ SKWVGESEK +R +F 
Sbjct: 573  KLGISPPKGILLYGPPGTGKTLLAKAIATESQANFIAIRGPEVLSKWVGESEKRIREIFR 632

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  APSIIF DEID +A  RG  ++G  V+DR+++QLL E+DG+ +   V VIAATNR
Sbjct: 633  KARQAAPSIIFIDEIDAIAPARGT-TEGERVTDRLINQLLTEMDGIQENSGVVVIAATNR 691

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV+++ELA  +EG TGA
Sbjct: 692  PDILDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRGMPLAKDVDLKELAKRTEGYTGA 751

Query: 983  DISLICREAAISAIEEN----------------LDASRITMQHLKTAIRHVQPSEIHSYK 1026
            DI+ + REAA++A++                  L+   +T +  + A++ V+PS      
Sbjct: 752  DIAALVREAAMNALKRAVSTLPKEIVEEEKEEFLNKLVVTKKDFEEALKKVKPSVTKYMM 811

Query: 1027 ELSAKFQ 1033
            E   +F+
Sbjct: 812  EYYRQFE 818



 Score =  219 bits (559), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/326 (41%), Positives = 191/326 (58%), Gaps = 33/326 (10%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            ++V P A+     +VP+V +ED+GG ++   ++ E VE P KH E F+R+G  PP G+L+
Sbjct: 190  VEVLPQAVEVREEKVPEVTYEDIGGLKDAIEKIREMVELPLKHPELFERLGIEPPKGVLL 249

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF 
Sbjct: 250  YGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIFI 309

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV+SQLL  +DGL  R  V VIAATNRPD IDPAL RPG
Sbjct: 310  DEIDAIAPKR-EEVVG-EVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPG 367

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN-------IRELACLSEGCTGADISLI 987
            RFDR + VG P++  R+EI +IH R +P   D +       +REL    E     D SLI
Sbjct: 368  RFDREIEVGVPDKQGRKEILQIHTRGMPIEPDFDKDSVIKVLREL----EKEERYDKSLI 423

Query: 988  CREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKF-QRLVHSNAEADESG 1046
             R      IE      +I+    +  IR +   E   Y ++ AK   +L+   AE    G
Sbjct: 424  SR-----IIE------KISKASSEDEIRQILKEEGKIYVDVKAKLIDKLLDELAEVT-HG 471

Query: 1047 YQLRPSKSIGSNMWTLIKSISLFLCR 1072
            +       +G+++  L +  ++ + R
Sbjct: 472  F-------VGADLAALAREAAMVVLR 490



 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/320 (37%), Positives = 164/320 (51%), Gaps = 78/320 (24%)

Query: 391 TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
            LP A ++  + V     +DI   GGL      +++++ +          LG+ P KGVL
Sbjct: 192 VLPQAVEVREEKVPEVTYEDI---GGLKDAIEKIREMVELPLKHPELFERLGIEPPKGVL 248

Query: 449 LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
           L+GPPGTGKT LA+  A+++      +NGPE++S+ YGESE+ L E+F  A ++APA++F
Sbjct: 249 LYGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEERLREIFKEAEENAPAIIF 308

Query: 509 IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
           IDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+I+PALRRPGR
Sbjct: 309 IDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGR 368

Query: 569 LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM-------------------- 608
            DREIE+               VP    R EIL     GM                    
Sbjct: 369 FDREIEV--------------GVPDKQGRKEILQIHTRGMPIEPDFDKDSVIKVLRELEK 414

Query: 609 ----EHSLLDSEVEYLSMA-----------------------------------THGFVG 629
               + SL+   +E +S A                                   THGFVG
Sbjct: 415 EERYDKSLISRIIEKISKASSEDEIRQILKEEGKIYVDVKAKLIDKLLDELAEVTHGFVG 474

Query: 630 ADLAALCNEAALVCLRRYSK 649
           ADLAAL  EAA+V LRR  K
Sbjct: 475 ADLAALAREAAMVVLRRLIK 494



 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/216 (45%), Positives = 134/216 (62%), Gaps = 20/216 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                LG+ P KG+LL+GPPGTGKT LA+  A +S  N   + GPEV+S+  GESE+ + 
Sbjct: 569 KAFKKLGISPPKGILLYGPPGTGKTLLAKAIATESQANFIAIRGPEVLSKWVGESEKRIR 628

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           E+F  A Q+AP+++FIDE+DAIAPAR    GE ++ R++  LL  MDG+    GV+VIAA
Sbjct: 629 EIFRKARQAAPSIIFIDEIDAIAPARGTTEGERVTDRLINQLLTEMDGIQENSGVVVIAA 688

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD ++PAL RPGR DR I                 VP+P +  RLEI      GM  
Sbjct: 689 TNRPDILDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRGMPL 732

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +  D +++ L+  T G+ GAD+AAL  EAA+  L+R
Sbjct: 733 A-KDVDLKELAKRTEGYTGADIAALVREAAMNALKR 767


>gi|289579864|ref|YP_003478330.1| ATPase AAA [Natrialba magadii ATCC 43099]
 gi|448281105|ref|ZP_21472413.1| ATPase AAA [Natrialba magadii ATCC 43099]
 gi|289529417|gb|ADD03768.1| AAA family ATPase, CDC48 subfamily [Natrialba magadii ATCC 43099]
 gi|445579429|gb|ELY33823.1| ATPase AAA [Natrialba magadii ATCC 43099]
          Length = 742

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 147/282 (52%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  +   F R+G  P
Sbjct: 436  DFRGALGEVEPSAMREVLVELPKISWDDVGGLHDAKEQVQESVEWPLNNPGRFSRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH ++ P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVDGRERILDIHTQETPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ E+ +A  + M+H + A+ +V+P+   +I  Y E
Sbjct: 675  REAAIEALREDHEADIVEMRHFRQAMENVRPTITDDILDYYE 716



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/229 (47%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV +  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVALSHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVALSHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 124/212 (58%), Gaps = 18/212 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FSRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q +P V+F DELDA+AP R  + G  +S+R+V  LL  +DG+   + V+VI ATN
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGRGGETGSNVSERVVNQLLTELDGLEEMEDVMVIGATN 607

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL-L 613
           RPD I+PAL R GR DR + I                P    R  IL   +   E  L  
Sbjct: 608 RPDMIDPALLRSGRFDRLVMI--------------GEPDVDGRERILD--IHTQETPLAA 651

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 652 DVTLREIAEITDGYVGSDLESIAREAAIEALR 683


>gi|448493708|ref|ZP_21609139.1| ATPase AAA [Halorubrum californiensis DSM 19288]
 gi|445689884|gb|ELZ42106.1| ATPase AAA [Halorubrum californiensis DSM 19288]
          Length = 740

 Score =  310 bits (794), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 148/282 (52%), Positives = 202/282 (71%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E + Q+ E+VEWP    E F R+G   
Sbjct: 436  DFSGALNEVEPSAMREVLVELPKISWDDVGGLSEAQQQVQESVEWPLTSPEKFDRMGVNA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPSRGQEM-GNNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P++  RE+I  IH    P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDQEGREQILDIHTENTPLAPDVSLREIAEITDGYVGSDLEGIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ ++ DA  + M+H + A+  V+P+   +I +Y E
Sbjct: 675  REAAIEALRDDDDAEEVEMKHFRRAMESVRPTINEDILAYYE 716



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F ++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +        S LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 140/242 (57%), Gaps = 31/242 (12%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAH 466
           +GGLS+    +++     SV+  L+S      +G+   KGVLL+GPPGTGKT +A+  A+
Sbjct: 464 VGGLSEAQQQVQE-----SVEWPLTSPEKFDRMGVNAPKGVLLYGPPGTGKTLMAKAVAN 518

Query: 467 DSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE 525
           ++  N  +V GP+++S+  GESE+A+ + F  A Q +P ++F DELD++AP+R ++ G  
Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNN 578

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +S+R+V  LL  +DG+     V+VI ATNRPD I+PAL R GR DR + I          
Sbjct: 579 VSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI---------- 628

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVC 643
                 P    R +IL       E++ L  +V    +A  T G+VG+DL  +  EAA+  
Sbjct: 629 ----GQPDQEGREQILDI---HTENTPLAPDVSLREIAEITDGYVGSDLEGIAREAAIEA 681

Query: 644 LR 645
           LR
Sbjct: 682 LR 683


>gi|448358955|ref|ZP_21547627.1| ATPase AAA [Natrialba chahannaoensis JCM 10990]
 gi|445644243|gb|ELY97260.1| ATPase AAA [Natrialba chahannaoensis JCM 10990]
          Length = 742

 Score =  310 bits (794), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/282 (51%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  + + F R+G  P
Sbjct: 436  DFRGALGEVEPSAMREVLVELPKISWDDVGGLHDAKEQVQESVEWPLNNPDRFSRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH +  P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVDGRERILDIHTQDTPLAADVTLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            RE+AI A+ E+ +A  + M+H + A+ +V+P+   +I  Y E
Sbjct: 675  RESAIEALREDHEADIVEMRHFRQAMENVRPTITDDILDYYE 716



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/229 (47%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV +  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVALSHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVALSHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 126/215 (58%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FSRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEEMEDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL       + + 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDVDGRERILDI---HTQDTP 648

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           L ++V    +A  T G+VG+DL ++  E+A+  LR
Sbjct: 649 LAADVTLREIAEITDGYVGSDLESIARESAIEALR 683


>gi|116245489|ref|XP_001230510.1| AGAP012655-PA [Anopheles gambiae str. PEST]
 gi|116133107|gb|EAU77835.1| AGAP012655-PA [Anopheles gambiae str. PEST]
          Length = 787

 Score =  310 bits (794), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 143/267 (53%), Positives = 196/267 (73%), Gaps = 1/267 (0%)

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            A   V+PSAMRE+++E P V+W D+GGQ E+K +L + ++WP  H E F R+G +PP G+
Sbjct: 504  ALQHVKPSAMREIMIECPNVRWTDIGGQDELKLKLRQIIDWPIHHPELFDRLGIKPPRGL 563

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            LMFGPPGCSKT++A+A+A+E+ LNFL++KG ELFS WVGESE+AVR LF +AR  APSII
Sbjct: 564  LMFGPPGCSKTMIAKAIATESRLNFLSIKGSELFSMWVGESERAVRDLFRRARQVAPSII 623

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLR 932
            FFDEID +   R  ES G SV +RV++QLL E+DG+    +V ++AATNRPD ID AL+R
Sbjct: 624  FFDEIDAIGGERSAES-GSSVKERVLAQLLTEMDGVSVLKDVRIVAATNRPDLIDRALMR 682

Query: 933  PGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAA 992
            PGR DR++YV  P+   REEIFRI L+ IP +S V++ EL   + GC+G++I  IC+EAA
Sbjct: 683  PGRLDRIVYVRLPDAAAREEIFRIKLKTIPTASTVDLAELVRRTAGCSGSEIEAICQEAA 742

Query: 993  ISAIEENLDASRITMQHLKTAIRHVQP 1019
            +  +E + D   I  +H + A+  V+P
Sbjct: 743  LKGLESSFDVETIEWEHFEHALGVVRP 769



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 144/278 (51%), Gaps = 25/278 (8%)

Query: 378 PPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTL- 436
           P L A  + ++   +    IE  NV+ T       +GG  +    L+ II        L 
Sbjct: 499 PALMAALQHVKPSAMREIMIECPNVRWT------DIGGQDELKLKLRQIIDWPIHHPELF 552

Query: 437 SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
             LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ G E+ S   GESE+A+ ++F
Sbjct: 553 DRLGIKPPRGLLMFGPPGCSKTMIAKAIATESRLNFLSIKGSELFSMWVGESERAVRDLF 612

Query: 497 DSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
             A Q AP+++F DE+DAI   R  + G  + +R++A LL  MDGV     V ++AATNR
Sbjct: 613 RRARQVAPSIIFFDEIDAIGGERSAESGSSVKERVLAQLLTEMDGVSVLKDVRIVAATNR 672

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM-EHSLLD 614
           PD I+ AL RPGRLDR + + +              P  A R EI    L  +   S +D
Sbjct: 673 PDLIDRALMRPGRLDRIVYVRL--------------PDAAAREEIFRIKLKTIPTASTVD 718

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQT 652
             +  L   T G  G+++ A+C EAAL  L     ++T
Sbjct: 719 --LAELVRRTAGCSGSEIEAICQEAALKGLESSFDVET 754



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 208/451 (46%), Gaps = 47/451 (10%)

Query: 203 VCT-CQELHLELVPLR--SRLKMNGAAFSKMKVSAERSRDQLGNGIDS-SPKTPMYQPRL 258
           +CT  Q   L LVP+    RL +    F  +K++  +   ++G  + +  P    +  ++
Sbjct: 71  LCTDSQRYGLVLVPISVVRRLGLMLGDFVAIKLTKAKDGKEVGTVVRTLWPVEDRHGAKV 130

Query: 259 SSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLEDESAIKL-LQTCAASWLYSRSL 317
             +++++             ++ N LN     +   LED   I L L+    + L++++ 
Sbjct: 131 FFEALDEF----------NDVSANELNATVTTLDGRLEDAEEIFLRLEDPTQANLFAKN- 179

Query: 318 LCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLY 377
             G  +   +  ++    ++  N L   + N+R +  V  ++  E N    +   K+ L 
Sbjct: 180 --GKFLLTSLKYQLQGCAIMSNNPLSLTVCNKRFRFLVDHALTTEGNDLT-DQLNKMSLK 236

Query: 378 PPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTL 436
             L  + ++ +   L +++    + Q  +   ++ +GGL    + LK+++ ++  + S  
Sbjct: 237 DRLYVILRTTKVTLLDDSKAAQHSHQQRM-FSLANIGGLDTTISELKELLEMAFGMDSKQ 295

Query: 437 SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESE----QAL 492
           +++G   ++G+LL G  G GKT L    A     ++  +N  EV S+ YGESE    +  
Sbjct: 296 TTVG-PVSRGILLSGVSGVGKTMLVNALATHYHCHVVRLNCSEVFSKFYGESEANVSRQF 354

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV---CRTDGVLV 549
            EVFD      PA+V ++EL  + P  K    ++ +R+    L L+D +    R +  +V
Sbjct: 355 AEVFD--VHPKPAMVVVEELHNLCP--KSTATDIVKRISQHFLTLLDSLHANVRGNRAVV 410

Query: 550 IAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME 609
           I  T+  D++ P LRR GR+D E E+               VP    R  IL  +LS   
Sbjct: 411 IGTTDSVDNVNPLLRRGGRMDYEFEL--------------PVPDAIARTAILERVLSRHG 456

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAA 640
            ++ + ++  ++  THG+VGADL  L ++AA
Sbjct: 457 QTVPEQDIRAVARITHGYVGADLENLVSKAA 487



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 14/216 (6%)

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA--RANA 868
            GIL+ G  G  KT++  A+A+    + + +   E+FSK+ GESE  V   FA+       
Sbjct: 304  GILLSGVSGVGKTMLVNALATHYHCHVVRLNCSEVFSKFYGESEANVSRQFAEVFDVHPK 363

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV---NVTVIAATNRPDK 925
            P+++  +E+  L      +S    +  R+    L  LD LH  V      VI  T+  D 
Sbjct: 364  PAMVVVEELHNLCP----KSTATDIVKRISQHFLTLLDSLHANVRGNRAVVIGTTDSVDN 419

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIF-RIHLRKIPCSSDVNIRELACLSEGCTGADI 984
            ++P L R GR D    +  P+   R  I  R+  R      + +IR +A ++ G  GAD+
Sbjct: 420  VNPLLRRGGRMDYEFELPVPDAIARTAILERVLSRHGQTVPEQDIRAVARITHGYVGADL 479

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
              +  +AA SA         I    L  A++HV+PS
Sbjct: 480  ENLVSKAASSAPT----GKPIDGPALMAALQHVKPS 511


>gi|21227358|ref|NP_633280.1| CdcH protein [Methanosarcina mazei Go1]
 gi|452209842|ref|YP_007489956.1| Cell division protein FtsH [Methanosarcina mazei Tuc01]
 gi|20905716|gb|AAM30952.1| CdcH protein [Methanosarcina mazei Go1]
 gi|452099744|gb|AGF96684.1| Cell division protein FtsH [Methanosarcina mazei Tuc01]
          Length = 751

 Score =  310 bits (794), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/285 (51%), Positives = 202/285 (70%), Gaps = 14/285 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            +F +A   + PSAMREV +EVP V W+D+GG  + K +L+E+VEWP K+ E FK +  +P
Sbjct: 422  NFREALKNIEPSAMREVYIEVPHVGWDDIGGLEKAKQELIESVEWPLKYPEMFKAVSIKP 481

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+FGPPG  KTL+A+AVA+E+  NF+++KGPEL SK+VGESE+A+R  F KA+  A
Sbjct: 482  PRGVLLFGPPGTGKTLLAKAVANESEANFISIKGPELLSKYVGESERAIRETFRKAKQAA 541

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  R   SD   VS+RV+SQ+L ELDG+ +  +V ++AATNRPD +DP
Sbjct: 542  PTVIFFDEIDSIAPQRSSVSD-THVSERVVSQILTELDGIEELKDVIIVAATNRPDMVDP 600

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDRL+Y+ PP +  RE+IF IH ++ P + DV + ELA ++EG  GADI  IC
Sbjct: 601  ALLRPGRFDRLIYIKPPGKEGREKIFEIHAKEKPLAEDVKLSELAEMTEGYVGADIEGIC 660

Query: 989  REAAISA-------------IEENLDASRITMQHLKTAIRHVQPS 1020
            REAA+ A             I+E     R++ +H + AIR V+P+
Sbjct: 661  REAAMLALREIVTPGADRKNIQEKAAEVRLSKRHFEKAIRRVKPT 705



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 108/263 (41%), Positives = 165/263 (62%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG R     + E +E P +H E F+++G  PP G+L+ GPPG  KT++A+AVAS
Sbjct: 173  ISYEDIGGLRREIQLVREMIELPMRHPELFQKLGVEPPKGVLLHGPPGTGKTMIAKAVAS 232

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF+ + GPE+ SK+ GESE+ +R +F +A  +APSIIF DEID +A  RG+ +   
Sbjct: 233  ETDANFITISGPEIVSKYYGESEQKLREIFEEAEKDAPSIIFIDEIDSIAPKRGEVTG-- 290

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             +  RV++QLL  +DGL  R  V VIAATNRP+ ID AL R GRFDR + +G P+   R+
Sbjct: 291  EMERRVVAQLLSLMDGLKSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRK 350

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR------- 1004
            +I  IH R +P   +V++ E+A ++ G  GAD+S +C+EAA+ A+               
Sbjct: 351  QILLIHTRGMPLEDEVSLSEIADVTHGFVGADLSSLCKEAAMHALRRITPEIDIEEEIPQ 410

Query: 1005 -------ITMQHLKTAIRHVQPS 1020
                   +T ++ + A+++++PS
Sbjct: 411  EIIDNLVVTKENFREALKNIEPS 433



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 112/239 (46%), Positives = 154/239 (64%), Gaps = 20/239 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLLHGPPGTGKT +A+  A ++  N
Sbjct: 178 IGGLRREIQLVREMIELPMRHPELFQKLGVEPPKGVLLHGPPGTGKTMIAKAVASETDAN 237

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE+VS+ YGESEQ L E+F+ A + AP+++FIDE+D+IAP R +   E+ +R+V
Sbjct: 238 FITISGPEIVSKYYGESEQKLREIFEEAEKDAPSIIFIDEIDSIAPKRGEVTGEMERRVV 297

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VIAATNRP+SI+ ALRR GR DREIEI               +
Sbjct: 298 AQLLSLMDGLKSRGEVVVIAATNRPNSIDEALRRGGRFDREIEI--------------GI 343

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYS 648
           P    R +IL     GM    L+ EV    +A  THGFVGADL++LC EAA+  LRR +
Sbjct: 344 PDRNGRKQILLIHTRGMP---LEDEVSLSEIADVTHGFVGADLSSLCKEAAMHALRRIT 399



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/235 (38%), Positives = 138/235 (58%), Gaps = 17/235 (7%)

Query: 413 LGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K +  +++ +           ++ ++P +GVLL GPPGTGKT LA+  A++S  N
Sbjct: 450 IGGLEKAKQELIESVEWPLKYPEMFKAVSIKPPRGVLLFGPPGTGKTLLAKAVANESEAN 509

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRM 530
             ++ GPE++S+  GESE+A+ E F  A Q+AP V+F DE+D+IAP R    +  +S+R+
Sbjct: 510 FISIKGPELLSKYVGESERAIRETFRKAKQAAPTVIFFDEIDSIAPQRSSVSDTHVSERV 569

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ +L  +DG+     V+++AATNRPD ++PAL RPGR DR I I            P  
Sbjct: 570 VSQILTELDGIEELKDVIIVAATNRPDMVDPALLRPGRFDRLIYI-----------KPPG 618

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                +  EI HA    +   +  SE   L+  T G+VGAD+  +C EAA++ LR
Sbjct: 619 KEGREKIFEI-HAKEKPLAEDVKLSE---LAEMTEGYVGADIEGICREAAMLALR 669


>gi|15920578|ref|NP_376247.1| hypothetical protein ST0376 [Sulfolobus tokodaii str. 7]
 gi|342306167|dbj|BAK54256.1| ATPase [Sulfolobus tokodaii str. 7]
          Length = 747

 Score =  310 bits (794), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 213/326 (65%), Gaps = 33/326 (10%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   ++P+ +REV +EVPKV W D+GG  EVK QL EAVEWP +  E F 
Sbjct: 422  LKVTMQDFLEAMKSIQPTLLREVYVEVPKVHWNDIGGLEEVKQQLREAVEWPLRFSELFN 481

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            + G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 482  KSGITPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 541

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+IIFFDEID +A +RG  +D   V++R+++QLL E+DG+     V VIAATNR
Sbjct: 542  KARQAAPTIIFFDEIDAIAPMRGLTTDS-GVTERIVNQLLAEMDGIVPLNKVVVIAATNR 600

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP++  R EI ++H R +P + D+ + ELA  +EG TGA
Sbjct: 601  PDILDPALLRPGRFDRLIYVPPPDKRARAEILKVHTRNVPLAEDITLDELAEKTEGYTGA 660

Query: 983  DISLICREAAISAI---------------EENLDASR-------------ITMQHLKTAI 1014
            DI  + REA I+A+               + N+D                +T +    A+
Sbjct: 661  DIEALVREATINAMRKIFNDCDKKAKDQCQNNVDCYNSKMRDCMNNAKVIVTKEDFNKAL 720

Query: 1015 RHVQPS----EIHSYKELSAKFQRLV 1036
              V+PS    +I  Y+ L+ + +R V
Sbjct: 721  EVVKPSLTAADIQRYERLAKELKRSV 746



 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 124/268 (46%), Positives = 177/268 (66%), Gaps = 19/268 (7%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            PKV WED+G   E K ++ E VEWP +H E F+R+G  PP GIL++GPPG  KTL+ARA+
Sbjct: 174  PKVTWEDIGDLEEAKQKIREIVEWPLRHPELFQRLGIEPPKGILLYGPPGNGKTLLARAL 233

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E G +F  + GPE+ SK+ GESE+ +R +F +A+ NAP+IIF DEID +A  R +E  
Sbjct: 234  ANEVGASFYTINGPEIMSKFYGESEQRLREIFEEAQKNAPAIIFIDEIDSIAPKR-EEVT 292

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DG+  R  V VI ATNRPD +DPAL RPGRFDR + + PP+   
Sbjct: 293  G-EVEKRVVAQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPGRFDREIEIRPPDTKG 351

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE-------NLDA 1002
            R+EI ++H R +P + DV++ +LA ++ G TGAD++ + +EAA++A+         NL+ 
Sbjct: 352  RKEILQVHTRNMPLAEDVDLDKLAEITYGYTGADLAALAKEAAMNALRRFIAEKKINLEQ 411

Query: 1003 SRI----------TMQHLKTAIRHVQPS 1020
             RI          TMQ    A++ +QP+
Sbjct: 412  ERIPAEILKELKVTMQDFLEAMKSIQPT 439



 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 142/212 (66%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LAR  A++ G + +T+NGPE++S+ YGESEQ L E+
Sbjct: 205 FQRLGIEPPKGILLYGPPGNGKTLLARALANEVGASFYTINGPEIMSKFYGESEQRLREI 264

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 265 FEEAQKNAPAIIFIDEIDSIAPKREEVTGEVEKRVVAQLLTLMDGIKGRGKVIVIGATNR 324

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREIEI            P   P    R EIL      M  +  D 
Sbjct: 325 PDAVDPALRRPGRFDREIEI-----------RP---PDTKGRKEILQVHTRNMPLA-EDV 369

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +++ L+  T+G+ GADLAAL  EAA+  LRR+
Sbjct: 370 DLDKLAEITYGYTGADLAALAKEAAMNALRRF 401



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/261 (39%), Positives = 142/261 (54%), Gaps = 41/261 (15%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+ P KG+LL GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ E+F  A
Sbjct: 484 GITPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKA 543

Query: 500 SQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
            Q+AP ++F DE+DAIAP R    D G  +++R+V  LL  MDG+   + V+VIAATNRP
Sbjct: 544 RQAAPTIIFFDEIDAIAPMRGLTTDSG--VTERIVNQLLAEMDGIVPLNKVVVIAATNRP 601

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLD 614
           D ++PAL RPGR DR I                 VP P +  R EIL      +  +  D
Sbjct: 602 DILDPALLRPGRFDRLI----------------YVPPPDKRARAEILKVHTRNVPLA-ED 644

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
             ++ L+  T G+ GAD+ AL  EA +  +R   KI    D           +   D   
Sbjct: 645 ITLDELAEKTEGYTGADIEALVREATINAMR---KIFNDCD-----------KKAKDQCQ 690

Query: 675 QDSDCSRNITESSRDCLDSAS 695
            + DC  +     RDC+++A 
Sbjct: 691 NNVDCYNS---KMRDCMNNAK 708


>gi|354610561|ref|ZP_09028517.1| AAA family ATPase, CDC48 subfamily [Halobacterium sp. DL1]
 gi|353195381|gb|EHB60883.1| AAA family ATPase, CDC48 subfamily [Halobacterium sp. DL1]
          Length = 741

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/272 (53%), Positives = 201/272 (73%), Gaps = 1/272 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W+DVGG  + K  + E+VEWP    E F R+G  P
Sbjct: 436  DFKGALNEVEPSAMREVLVELPKLSWDDVGGLDDAKDNIKESVEWPLNQPEKFTRMGVDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG++  G +VS+RV++QLL ELDGL +   V VIAATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPGRGQDV-GNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG P+   RE+I +IH   IP + DV++RELA +++G  G+D++ I 
Sbjct: 615  ALIRSGRFDRLVQVGQPDVEGREQILKIHSADIPLAPDVSLRELAEITDGYVGSDLANIT 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAAI A+ E+ +A  + M+H + A+  V+P+
Sbjct: 675  REAAIEALREDENAEEVEMRHFRRAMEDVRPT 706



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/264 (43%), Positives = 165/264 (62%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLESEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R +VTVIAATNR D IDPAL R GRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLSLMDGLEERGDVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-- 999
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+          EE+  
Sbjct: 364  EILKIHTRGMPLSDDVNLGSLADDTHGFVGADIESLTKEAAMRALRRYLPEIELDEEDIP 423

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               +D   +  +  K A+  V+PS
Sbjct: 424  PSLIDRMIVKREDFKGALNEVEPS 447



 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/238 (47%), Positives = 151/238 (63%), Gaps = 20/238 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLESEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 311 AQLLSLMDGLEERGDVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM    L  +V   S+A  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILKIHTRGMP---LSDDVNLGSLADDTHGFVGADIESLTKEAAMRALRRY 411



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 130/215 (60%), Gaps = 24/215 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +G+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FTRMGVDPPAGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q +P V+F DELD++AP R +D G  +S+R+V  LL  +DG+   + V+VIAATN
Sbjct: 548 FRKARQVSPTVIFFDELDSLAPGRGQDVGNNVSERVVNQLLTELDGLEEMEEVMVIAATN 607

Query: 555 RPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAVP-SPAQRLEILHALLSGMEH 610
           RPD I+PAL R GR DR +++   D+     +LK   A +P +P                
Sbjct: 608 RPDIIDPALIRSGRFDRLVQVGQPDVEGREQILKIHSADIPLAP---------------- 651

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D  +  L+  T G+VG+DLA +  EAA+  LR
Sbjct: 652 ---DVSLRELAEITDGYVGSDLANITREAAIEALR 683


>gi|341898432|gb|EGT54367.1| hypothetical protein CAEBREN_11672 [Caenorhabditis brenneri]
          Length = 714

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 143/265 (53%), Positives = 195/265 (73%), Gaps = 1/265 (0%)

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            AR ++RP+ +R+ ILEVP V W D+GG  E+K ++ +AV WPQ+H EAF+R G  PP GI
Sbjct: 428  ARKRIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQRHPEAFERFGIDPPAGI 487

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L++GPPGCSKTL+ARA+A+EA +NFLAVKGPELFSKWVG+SEKA+R LFA+AR  AP+I+
Sbjct: 488  LLYGPPGCSKTLIARALANEAKMNFLAVKGPELFSKWVGDSEKAIRDLFARARQVAPTIV 547

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLR 932
            FFDEID + + RG E     VSDRV++QLL ELDGL +   V ++AATNRPD++D ALLR
Sbjct: 548  FFDEIDAVGSSRGSEKSS-GVSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLR 606

Query: 933  PGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAA 992
            PGR DR +YVG P E  R+ I  +  RK+    +  I++L   + G +GA++  +CR AA
Sbjct: 607  PGRLDRAIYVGLPCEATRKAILEMRTRKMKIDEESIIQKLVEKTSGYSGAELVAVCRTAA 666

Query: 993  ISAIEENLDASRITMQHLKTAIRHV 1017
            + A+ EN++AS +  +H + A+  V
Sbjct: 667  MFAMRENIEASVVQWKHFEEALSAV 691



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 125/212 (58%), Gaps = 24/212 (11%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G+ P  G+LL+GPPG  KT +AR  A+++ +N   V GPE+ S+  G+SE+A+ ++F  
Sbjct: 479 FGIDPPAGILLYGPPGCSKTLIARALANEAKMNFLAVKGPELFSKWVGDSEKAIRDLFAR 538

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEE---LSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q AP +VF DE+DA+  +R  G E+   +S R++A LL  +DG+ ++  V+++AATNR
Sbjct: 539 ARQVAPTIVFFDEIDAVGSSR--GSEKSSGVSDRVLAQLLTELDGLEKSSRVILLAATNR 596

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD ++ AL RPGRLDR I + +              P  A R  IL      M+   +D 
Sbjct: 597 PDQLDSALLRPGRLDRAIYVGL--------------PCEATRKAILEMRTRKMK---IDE 639

Query: 616 E--VEYLSMATHGFVGADLAALCNEAALVCLR 645
           E  ++ L   T G+ GA+L A+C  AA+  +R
Sbjct: 640 ESIIQKLVEKTSGYSGAELVAVCRTAAMFAMR 671


>gi|433638985|ref|YP_007284745.1| AAA family ATPase, CDC48 subfamily [Halovivax ruber XH-70]
 gi|433290789|gb|AGB16612.1| AAA family ATPase, CDC48 subfamily [Halovivax ruber XH-70]
          Length = 742

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 148/282 (52%), Positives = 202/282 (71%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PKV W+DVGG  + K Q+ E+VEWP    E F R+G  P
Sbjct: 436  DFGGALNEVEPSAMREVLVELPKVSWDDVGGLHDAKEQVQESVEWPLNDPEKFGRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E  G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGEV-GSNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH   +P ++DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDTDGRERILEIHTEDMPLAADVSLREIAEITDGYVGSDLESIG 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ ++ +A  + M+H + A+ +V+P+   +I  Y E
Sbjct: 675  REAAIEALRDDDEAEVVEMRHFRQALENVRPTITEDILEYYE 716



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 110/229 (48%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDETGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DVN+  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVNLSRLADDTHGFVGADIESLTKEAAMKALRRYL 412



 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGREEILQIHTRGMPLS-DDVNLSRLADDTHGFVGADIESLTKEAAMKALRRY 411



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FGRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+     V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGEVGSNVSERVVNQLLTELDGLEDMGDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL      M  + 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDTDGRERILEIHTEDMPLA- 650

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 651 ADVSLREIAEITDGYVGSDLESIGREAAIEALR 683


>gi|327310634|ref|YP_004337531.1| AAA ATPase [Thermoproteus uzoniensis 768-20]
 gi|326947113|gb|AEA12219.1| AAA family ATPase, possible cell division control protein cdc48
            [Thermoproteus uzoniensis 768-20]
          Length = 755

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 150/316 (47%), Positives = 214/316 (67%), Gaps = 22/316 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   V+P+ +REVI+EVP+V W D+GG  ++K +L E VEWP K++  F 
Sbjct: 436  LKVGMGDFMEAMKFVQPTVLREVIIEVPEVHWSDIGGYEDIKQELREIVEWPMKYRAYFD 495

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL++GPPG  KT+ A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F 
Sbjct: 496  ELGVEPPRGILLYGPPGVGKTMFAKAVATESGANFIAVRGPEVLSKWVGESEKAVREIFK 555

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP ++FFDEID +A  RG       V+DR+++QLL E+DG+    NV V+AATNR
Sbjct: 556  RARMAAPCVVFFDEIDSIAPARGSRLGDSGVTDRIVNQLLAEMDGIGTLRNVVVMAATNR 615

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP-----------CSSD--VNI 969
            PD +DPALLRPGRFDR++YV PP+E  R EI ++H R++            C  +  VN+
Sbjct: 616  PDILDPALLRPGRFDRIIYVPPPDEKARLEILKVHTRRVKLCDEAAAKDGRCKKEDVVNL 675

Query: 970  RELACLSEGCTGADISLICREAAISAIEENL-----DASRITMQHLKTAIRHVQPS---- 1020
             ELA  +EG TGADI+ + REAA+ A+ E +      A  ++ QH + A++ + PS    
Sbjct: 676  AELAKRTEGYTGADIAALVREAAMLALRETIRERAGSAKPVSRQHFEEALKRIPPSLTKE 735

Query: 1021 EIHSYKELSAKFQRLV 1036
            ++  Y+E+S + +R V
Sbjct: 736  DVRLYEEMSKRIKRAV 751



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/294 (42%), Positives = 182/294 (61%), Gaps = 32/294 (10%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VR   ++E  L +P+V WED+G   E K ++ E VE P +H E FK +G  PP GIL++G
Sbjct: 162  VREEPVKEAELAIPRVTWEDIGDLEEAKQKIRELVELPLRHPELFKHLGIEPPKGILLYG 221

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DE
Sbjct: 222  PPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEAKLREIFDEAKKNAPAIIFIDE 281

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R +E  G  V  RV++QLL  +DGL +R  + VI ATNRPD +DPAL RPGRF
Sbjct: 282  IDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQIVVIGATNRPDAVDPALRRPGRF 339

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIP-CSS------------DVNIRELACLSEGCTGAD 983
            DR + +  P++  R EI ++H R +P C+S            +V++ ++A ++ G TGAD
Sbjct: 340  DREIQIPMPDKRARREILQVHTRNMPLCTSEDVKAGVCAPGDEVDLDKIAEMTHGYTGAD 399

Query: 984  ISLICREAAISAIEEN-----------------LDASRITMQHLKTAIRHVQPS 1020
            I+ + +EAA+SA+ +                  L+  ++ M     A++ VQP+
Sbjct: 400  IAALAKEAAMSALRKAVSKGLIDLDQESIPPDVLNKLKVGMGDFMEAMKFVQPT 453



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/225 (44%), Positives = 138/225 (61%), Gaps = 30/225 (13%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 206 FKHLGIEPPKGILLYGPPGTGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEAKLREI 265

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           FD A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     ++VI ATNR
Sbjct: 266 FDEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQIVVIGATNR 325

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREI+I M              P    R EIL      M   L  S
Sbjct: 326 PDAVDPALRRPGRFDREIQIPM--------------PDKRARREILQVHTRNM--PLCTS 369

Query: 616 E--------------VEYLSMATHGFVGADLAALCNEAALVCLRR 646
           E              ++ ++  THG+ GAD+AAL  EAA+  LR+
Sbjct: 370 EDVKAGVCAPGDEVDLDKIAEMTHGYTGADIAALAKEAAMSALRK 414



 Score =  163 bits (413), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/252 (40%), Positives = 139/252 (55%), Gaps = 33/252 (13%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG       L++I+      ++    LG+ P +G+LL+GPPG GKT  A+  A +SG
Sbjct: 468 SDIGGYEDIKQELREIVEWPMKYRAYFDELGVEPPRGILLYGPPGVGKTMFAKAVATESG 527

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N   V GPEV+S+  GESE+A+ E+F  A  +AP VVF DE+D+IAPAR  + G   ++
Sbjct: 528 ANFIAVRGPEVLSKWVGESEKAVREIFKRARMAAPCVVFFDEIDSIAPARGSRLGDSGVT 587

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            R+V  LL  MDG+     V+V+AATNRPD ++PAL RPGR DR I              
Sbjct: 588 DRIVNQLLAEMDGIGTLRNVVVMAATNRPDILDPALLRPGRFDRII-------------- 633

Query: 588 PAAVPSPAQ--RLEILHALLSGM----EHSLLDSEVEY--------LSMATHGFVGADLA 633
              VP P +  RLEIL      +    E +  D   +         L+  T G+ GAD+A
Sbjct: 634 --YVPPPDEKARLEILKVHTRRVKLCDEAAAKDGRCKKEDVVNLAELAKRTEGYTGADIA 691

Query: 634 ALCNEAALVCLR 645
           AL  EAA++ LR
Sbjct: 692 ALVREAAMLALR 703


>gi|147920787|ref|YP_685407.1| cell division cycle protein 48 [Methanocella arvoryzae MRE50]
 gi|110620803|emb|CAJ36081.1| cell division cycle protein 48 [Methanocella arvoryzae MRE50]
          Length = 743

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 146/273 (53%), Positives = 197/273 (72%), Gaps = 1/273 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A   V+PSAMRE+ LE    +W DVGG  E K +++EA+EWP K  + FK +G RP
Sbjct: 437  DFAAAIKDVQPSAMREIFLEPTNTRWSDVGGLDEAKQEIIEAIEWPLKSPKKFKDMGIRP 496

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GI+++GPPG  KTL+ARAVA E+  NF+ ++GPEL SKWVGESEKAVR  F KAR  +
Sbjct: 497  PKGIVLYGPPGTGKTLLARAVAGESEANFINIRGPELLSKWVGESEKAVRETFRKARQVS 556

Query: 869  PSIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            PSIIFFDE+D LA  RG    DG  VS+RV++Q+L ELDGL +   V VI A+NRPD ID
Sbjct: 557  PSIIFFDELDALAPARGGGGEDGSRVSERVVNQILTELDGLVELEGVVVIGASNRPDIID 616

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLI 987
            PALLRPGRFDRL+YVG P++  R  I +IH R +P ++DV++ ++A L+E   G+D+  I
Sbjct: 617  PALLRPGRFDRLVYVGAPSKEGRIGILKIHTRNMPLAADVDLGQIADLTENYVGSDLEAI 676

Query: 988  CREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            CREAA+ A+ E+ +A  ++ +H + A++ V+P+
Sbjct: 677  CREAAMLALRESFEAKEVSFRHFQEAVKKVKPT 709



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/263 (45%), Positives = 167/263 (63%), Gaps = 17/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG RE   ++ E +E P KH E F+R+G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 189  ITYEDIGGLREEVQRVREMIELPMKHPELFQRLGIDPPKGVLLHGPPGTGKTLLAKAVAN 248

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F ++ GPE+ SK+ GESE+ +R +F +AR +APSIIF DE+D +A  R +E  G 
Sbjct: 249  ECGAEFYSIAGPEIMSKYYGESEQRLREIFEQARDSAPSIIFIDELDSIAPKR-EEVTG- 306

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P+ +DR 
Sbjct: 307  EVERRVVAQLLTMMDGLEERGQVVVIGATNRLDAIDPALRRAGRFDREIEIGVPDASDRL 366

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI +IH R +P    V++  +A +S G  GAD+S + +EAA+ A+               
Sbjct: 367  EILQIHTRGMPLEG-VDLNRIAAISHGFVGADLSGLSKEAAMKALRRYLPELDLDKEIPR 425

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E L+  R+T      AI+ VQPS
Sbjct: 426  EFLEKMRVTGDDFAAAIKDVQPS 448



 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 113/251 (45%), Positives = 156/251 (62%), Gaps = 21/251 (8%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           E++    T E     +GGL +E   ++++I +          LG+ P KGVLLHGPPGTG
Sbjct: 183 EYKTTGITYED----IGGLREEVQRVREMIELPMKHPELFQRLGIDPPKGVLLHGPPGTG 238

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A++ G   +++ GPE++S+ YGESEQ L E+F+ A  SAP+++FIDELD+IA
Sbjct: 239 KTLLAKAVANECGAEFYSIAGPEIMSKYYGESEQRLREIFEQARDSAPSIIFIDELDSIA 298

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R++   E+ +R+VA LL +MDG+     V+VI ATNR D+I+PALRR GR DREIEI 
Sbjct: 299 PKREEVTGEVERRVVAQLLTMMDGLEERGQVVVIGATNRLDAIDPALRRAGRFDREIEI- 357

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                         VP  + RLEIL     GM    +D  +  ++  +HGFVGADL+ L 
Sbjct: 358 -------------GVPDASDRLEILQIHTRGMPLEGVD--LNRIAAISHGFVGADLSGLS 402

Query: 637 NEAALVCLRRY 647
            EAA+  LRRY
Sbjct: 403 KEAAMKALRRY 413



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 143/239 (59%), Gaps = 19/239 (7%)

Query: 411 SKLGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL + +  I++ I            +G+RP KG++L+GPPGTGKT LAR  A +S 
Sbjct: 463 SDVGGLDEAKQEIIEAIEWPLKSPKKFKDMGIRPPKGIVLYGPPGTGKTLLARAVAGESE 522

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE---L 526
            N   + GPE++S+  GESE+A+ E F  A Q +P+++F DELDA+APAR  GGE+   +
Sbjct: 523 ANFINIRGPELLSKWVGESEKAVRETFRKARQVSPSIIFFDELDALAPARGGGGEDGSRV 582

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           S+R+V  +L  +DG+   +GV+VI A+NRPD I+PAL RPGR DR + +           
Sbjct: 583 SERVVNQILTELDGLVELEGVVVIGASNRPDIIDPALLRPGRFDRLVYV----------- 631

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                PS   R+ IL      M  +  D ++  ++  T  +VG+DL A+C EAA++ LR
Sbjct: 632 ---GAPSKEGRIGILKIHTRNMPLA-ADVDLGQIADLTENYVGSDLEAICREAAMLALR 686


>gi|164657456|ref|XP_001729854.1| hypothetical protein MGL_2840 [Malassezia globosa CBS 7966]
 gi|159103748|gb|EDP42640.1| hypothetical protein MGL_2840 [Malassezia globosa CBS 7966]
          Length = 758

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 147/304 (48%), Positives = 209/304 (68%), Gaps = 7/304 (2%)

Query: 719  IADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVG 778
            I    H  V +S   + +S    A K+ + DF  A+  VRPSAMREV +E PKV W+ + 
Sbjct: 435  ITRRIHKPVHESLASLSLSHD--AEKVAMPDFHAAQNIVRPSAMREVFVETPKVTWDSIA 492

Query: 779  GQRE----VKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAG 834
                    +K Q+ E VEWP  H  +F R+G  PP G L++GPPGCSKTL A+A+A E+G
Sbjct: 493  DDENDSLSIKRQIQECVEWPLTHAASFARLGIDPPRGALLYGPPGCSKTLTAKALARESG 552

Query: 835  LNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS 894
            LNFLAV+GPEL SK+VG+SE+A+R +F +AR  APSI+FFDE+D ++ IRG ++   S S
Sbjct: 553  LNFLAVRGPELVSKYVGDSERAIREVFRRARTAAPSIVFFDELDAISGIRGTDTSAGS-S 611

Query: 895  DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIF 954
            DR+++ LL E+DG+    +V V+AATNRPD IDPALLRPGR DRLLYVGPP+ T RE I 
Sbjct: 612  DRMVASLLTEMDGIDAESHVVVVAATNRPDCIDPALLRPGRIDRLLYVGPPSTTVRERIL 671

Query: 955  RIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAI 1014
            ++  R++P    V+++ +A L+ GC+GA++  IC+EA + A++E++  ++I  +H + A 
Sbjct: 672  QMRTRRMPIDEGVDLQAIAELAAGCSGAEVVAICQEAGLRAMKEDVACTKIAHRHFEEAA 731

Query: 1015 RHVQ 1018
            R +Q
Sbjct: 732  RTMQ 735



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/270 (36%), Positives = 142/270 (52%), Gaps = 22/270 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            ++ +GG       +   VE P      F++ G  PP G+L++GPPG  KT +AR VA   
Sbjct: 208  YQALGGLDAQIATIRTLVELPLTQPHLFEQYGLTPPRGVLLYGPPGTGKTSLARTVALSL 267

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR----GKESD 889
              +   + GPEL S + GE+E  +RS+F  A ++  SII  DEID LA  R       ++
Sbjct: 268  QAHVQTINGPELSSVYHGETESKLRSIFENAASHKRSIIILDEIDALAPRRDASAAVHAE 327

Query: 890  GVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
            G   V  RV++ LL  LDG+    +V VIAATNRP  IDPAL RPGR DR + +G P+  
Sbjct: 328  GAGEVERRVVATLLTLLDGMAS-THVVVIAATNRPSAIDPALRRPGRLDREIEIGVPDAP 386

Query: 949  DREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL------- 1000
             R+ I ++ LR++P S  D ++  LA  + G  GAD++ + REA +  I   +       
Sbjct: 387  ARQAILQVLLRRVPHSLRDEDVANLAARTHGYVGADLAALVREAGMLTITRRIHKPVHES 446

Query: 1001 --------DASRITMQHLKTAIRHVQPSEI 1022
                    DA ++ M     A   V+PS +
Sbjct: 447  LASLSLSHDAEKVAMPDFHAAQNIVRPSAM 476



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/215 (42%), Positives = 125/215 (58%), Gaps = 20/215 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           ++ + LG+ P +G LL+GPPG  KT  A+  A +SG+N   V GPE+VS+  G+SE+A+ 
Sbjct: 517 ASFARLGIDPPRGALLYGPPGCSKTLTAKALARESGLNFLAVRGPELVSKYVGDSERAIR 576

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           EVF  A  +AP++VF DELDAI+  R  D     S RMVA+LL  MDG+     V+V+AA
Sbjct: 577 EVFRRARTAAPSIVFFDELDAISGIRGTDTSAGSSDRMVASLLTEMDGIDAESHVVVVAA 636

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL RPGR+DR           LL   P   PS   R  IL      M    
Sbjct: 637 TNRPDCIDPALLRPGRIDR-----------LLYVGP---PSTTVRERILQMRTRRMP--- 679

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           +D  V+  ++A    G  GA++ A+C EA L  ++
Sbjct: 680 IDEGVDLQAIAELAAGCSGAEVVAICQEAGLRAMK 714


>gi|328861741|gb|EGG10844.1| ATPase family protein [Melampsora larici-populina 98AG31]
          Length = 642

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 152/289 (52%), Positives = 212/289 (73%), Gaps = 5/289 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +KLE  D EKA +   PSAMREV +E PKVKW DVGGQ  VK +L E+VEWP K+ E FK
Sbjct: 343  MKLEANDVEKALLTTLPSAMREVFIETPKVKWSDVGGQELVKQKLRESVEWPMKYSETFK 402

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G RP  G+L++GPPGCSKTL+A+A+ASE+GLNF+++KG E+F K+VGESEK++R LF 
Sbjct: 403  TLGIRPTRGVLLYGPPGCSKTLIAKALASESGLNFISLKGSEIFHKYVGESEKSIRDLFR 462

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVS-DRVMSQLLVELDGLHQRVNVTVIAATN 921
            KARA +PS++F DEID +AA R  E  G S + DRV++ LL E+DG+ +   V V+AATN
Sbjct: 463  KARAASPSVVFLDEIDTIAASRSSEESGGSGTQDRVLTSLLTEMDGIEELNGVLVLAATN 522

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID AL+RPGR DR+LYVGPP+   R+EI +I+  K+  S++VNI  LA +++GCTG
Sbjct: 523  RPDVIDSALMRPGRIDRILYVGPPDYASRKEILKINFGKMSISNEVNIDRLAEMTDGCTG 582

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYK 1026
            A+I  +C++AA+  + ++L+A++++ + L  A     R + P  I  Y+
Sbjct: 583  AEIVSMCQDAAMITMNKDLNATQVSEEDLLEAANQIRRRITPETIKMYE 631



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 33/301 (10%)

Query: 366 FVINHETKVYLYPPLNAVSK------SLREGTLPNAQIEFQNVQATVEQDISKLGGLSKE 419
           FVI   T++ + P      K         +  L + QI   ++Q   E     +GGL  +
Sbjct: 53  FVITRNTEIKINPLFQTNDKVPPTEPKTSQPPLGDQQI---HLQTNDEVGYDAVGGLDAQ 109

Query: 420 YAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGP 478
              ++D++     +  L S  GL P +G+LL+GPPGTGKT LA + A  +G +  T++  
Sbjct: 110 VEQIRDLVELPLTRPELYSHFGLAPPRGILLYGPPGTGKTLLASIVAKSTGSSFLTLSSS 169

Query: 479 EVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLM 538
            + S  +GESEQ ++++F  A   +P ++ IDE+D + P R  GG E+ +R+V  LL  M
Sbjct: 170 SIGSAYHGESEQKIYDLFAEAKAKSPCLILIDEIDGLFPNRDSGG-EVERRLVGALLTCM 228

Query: 539 DGV--------CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           DG+           + ++VIA TNRP++I+PALRRPGR DRE+EI               
Sbjct: 229 DGIEDKVANNQSHPETMMVIATTNRPNAIDPALRRPGRFDRELEI--------------G 274

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           +P  + R +IL  LL  + H L   +++  +  THG+VGADL +L   A L  ++R  + 
Sbjct: 275 IPDASARFKILQVLLRRVPHQLSVDQIKLYADRTHGYVGADLVSLIRTAGLDAIKRSIQC 334

Query: 651 Q 651
           Q
Sbjct: 335 Q 335



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 136/239 (56%), Gaps = 12/239 (5%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++ VGG      Q+ + VE P    E +   G  PP GIL++GPPG  KTL+A  VA
Sbjct: 97   EVGYDAVGGLDAQVEQIRDLVELPLTRPELYSHFGLAPPRGILLYGPPGTGKTLLASIVA 156

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
               G +FL +    + S + GESE+ +  LFA+A+A +P +I  DEIDGL   R     G
Sbjct: 157  KSTGSSFLTLSSSSIGSAYHGESEQKIYDLFAEAKAKSPCLILIDEIDGLFPNR---DSG 213

Query: 891  VSVSDRVMSQLLVELDGLHQRV--------NVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
              V  R++  LL  +DG+  +V         + VIA TNRP+ IDPAL RPGRFDR L +
Sbjct: 214  GEVERRLVGALLTCMDGIEDKVANNQSHPETMMVIATTNRPNAIDPALRRPGRFDRELEI 273

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVN-IRELACLSEGCTGADISLICREAAISAIEENL 1000
            G P+ + R +I ++ LR++P    V+ I+  A  + G  GAD+  + R A + AI+ ++
Sbjct: 274  GIPDASARFKILQVLLRRVPHQLSVDQIKLYADRTHGYVGADLVSLIRTAGLDAIKRSI 332



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 128/215 (59%), Gaps = 18/215 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T  +LG+RPT+GVLL+GPPG  KT +A+  A +SG+N  ++ G E+  +  GESE+++ +
Sbjct: 400 TFKTLGIRPTRGVLLYGPPGCSKTLIAKALASESGLNFISLKGSEIFHKYVGESEKSIRD 459

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEEL---SQRMVATLLNLMDGVCRTDGVLVIA 551
           +F  A  ++P+VVF+DE+D IA +R            R++ +LL  MDG+   +GVLV+A
Sbjct: 460 LFRKARAASPSVVFLDEIDTIAASRSSEESGGSGTQDRVLTSLLTEMDGIEELNGVLVLA 519

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+ AL RPGR+DR           +L   P   P  A R EIL      M  S
Sbjct: 520 ATNRPDVIDSALMRPGRIDR-----------ILYVGP---PDYASRKEILKINFGKMSIS 565

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             +  ++ L+  T G  GA++ ++C +AA++ + +
Sbjct: 566 -NEVNIDRLAEMTDGCTGAEIVSMCQDAAMITMNK 599


>gi|352682240|ref|YP_004892764.1| AAA family cell division cycle protein [Thermoproteus tenax Kra 1]
 gi|350275039|emb|CCC81686.1| cell division cycle protein, AAA family [Thermoproteus tenax Kra 1]
          Length = 782

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 148/316 (46%), Positives = 216/316 (68%), Gaps = 22/316 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   V+P+ +REVI+EVP+V+W+D+GG   +K +L E VEWP K++  F 
Sbjct: 464  LKVGMSDFMEAMKFVQPTVLREVIIEVPEVRWDDIGGYDNIKQELREIVEWPMKYRPYFD 523

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL++GPPG  KT+ A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F 
Sbjct: 524  ELGIEPPKGILLYGPPGVGKTMFAKAVATESGANFIAVRGPEILSKWVGESEKAVREIFK 583

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP ++FFDEID +A  RG       V+DR+++Q+L E+DG+    NV V+AATNR
Sbjct: 584  RARMAAPCVVFFDEIDSIAPARGSRLGDSGVTDRIVNQMLAEMDGIGALKNVVVMAATNR 643

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP-----------CSSD--VNI 969
            PD +DPALLRPGRFDR++YV PP+E  R EIF++H +++            C  +  V++
Sbjct: 644  PDILDPALLRPGRFDRIIYVPPPDEKARLEIFKVHTKRVKLCDTSAVKEGRCKKEEVVDL 703

Query: 970  RELACLSEGCTGADISLICREAAISAIEENL-----DASRITMQHLKTAIRHVQPS---- 1020
             ELA  +EG TGADI+ + REAA+ A+ E +      A  ++ QH + A++ + PS    
Sbjct: 704  EELAKRTEGYTGADIAALVREAAMLALRETIRERASGARPVSRQHFEEALKRIPPSLTKE 763

Query: 1021 EIHSYKELSAKFQRLV 1036
            +I  Y+E+S + +R +
Sbjct: 764  DIKMYEEVSKRMRRAI 779



 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/294 (42%), Positives = 181/294 (61%), Gaps = 32/294 (10%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VR   ++E  L +P+V WED+G   E K ++ E VE P +H E FK +G  PP GIL++G
Sbjct: 190  VREEPVKETELAIPRVTWEDIGDLEEAKQKIRELVELPLRHPELFKHLGIEPPKGILLYG 249

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+A+AVA+EA   F+A+ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DE
Sbjct: 250  PPGVGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEAKLREIFEEAKKNAPAIIFIDE 309

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R +E  G  V  RV++QLL  +DGL +R  + VI ATNRPD +DPAL RPGRF
Sbjct: 310  IDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQIVVIGATNRPDAVDPALRRPGRF 367

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIP-CSSD------------VNIRELACLSEGCTGAD 983
            DR + +  P++  R EI ++H R +P C+SD            V++  +A ++ G TGAD
Sbjct: 368  DREIQIPMPDKRARREILQVHTRNMPLCTSDDVKLGLCAKGDEVDLDRIAEMTHGYTGAD 427

Query: 984  ISLICREAAISAIE-----------------ENLDASRITMQHLKTAIRHVQPS 1020
            I+ + +EAA+SA+                  E L+  ++ M     A++ VQP+
Sbjct: 428  IAALAKEAAMSALRKAVAKGLVDLDQETIPPEVLNKLKVGMSDFMEAMKFVQPT 481



 Score =  192 bits (488), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/223 (43%), Positives = 136/223 (60%), Gaps = 26/223 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A+++      +NGPE++S+ YGESE  L E+
Sbjct: 234 FKHLGIEPPKGILLYGPPGVGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEAKLREI 293

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     ++VI ATNR
Sbjct: 294 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQIVVIGATNR 353

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREI+I M              P    R EIL      M     D 
Sbjct: 354 PDAVDPALRRPGRFDREIQIPM--------------PDKRARREILQVHTRNMPLCTSDD 399

Query: 616 ------------EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                       +++ ++  THG+ GAD+AAL  EAA+  LR+
Sbjct: 400 VKLGLCAKGDEVDLDRIAEMTHGYTGADIAALAKEAAMSALRK 442



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/250 (39%), Positives = 137/250 (54%), Gaps = 33/250 (13%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG       L++I+      +     LG+ P KG+LL+GPPG GKT  A+  A +SG N
Sbjct: 498 IGGYDNIKQELREIVEWPMKYRPYFDELGIEPPKGILLYGPPGVGKTMFAKAVATESGAN 557

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
              V GPE++S+  GESE+A+ E+F  A  +AP VVF DE+D+IAPAR  + G   ++ R
Sbjct: 558 FIAVRGPEILSKWVGESEKAVREIFKRARMAAPCVVFFDEIDSIAPARGSRLGDSGVTDR 617

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  +L  MDG+     V+V+AATNRPD ++PAL RPGR DR I                
Sbjct: 618 IVNQMLAEMDGIGALKNVVVMAATNRPDILDPALLRPGRFDRII---------------- 661

Query: 590 AVPSPAQ--RLEILH------------ALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
            VP P +  RLEI              A+  G        ++E L+  T G+ GAD+AAL
Sbjct: 662 YVPPPDEKARLEIFKVHTKRVKLCDTSAVKEGRCKKEEVVDLEELAKRTEGYTGADIAAL 721

Query: 636 CNEAALVCLR 645
             EAA++ LR
Sbjct: 722 VREAAMLALR 731


>gi|15897351|ref|NP_341956.1| AAA ATPase [Sulfolobus solfataricus P2]
 gi|13813572|gb|AAK40746.1| AAA family ATPase [Sulfolobus solfataricus P2]
          Length = 769

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 145/257 (56%), Positives = 188/257 (73%), Gaps = 1/257 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   ++P+ +REV +EVPKVKWED+GG  E K QL EAVEWP K  E F+
Sbjct: 444 LKVTMQDFIDAMKFIQPTLLREVYVEVPKVKWEDIGGLEEAKQQLREAVEWPLKFPEMFE 503

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           ++G RPP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F 
Sbjct: 504 KLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREIFR 563

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           +AR  AP +IFFDEID +A +RG   D   V++R+++QLL E+DG+     V VIAATNR
Sbjct: 564 RARQTAPCVIFFDEIDSIAPMRGFTHDS-GVTERIVNQLLSEMDGIQSLNRVVVIAATNR 622

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +DPALLRPGRFDRL+YV PP+E  R EI +I+ R +P  S VN+ ELA   EG TGA
Sbjct: 623 PDILDPALLRPGRFDRLIYVPPPDEKARIEILKIYTRTLPIDSSVNLEELAKKLEGYTGA 682

Query: 983 DISLICREAAISAIEEN 999
           DI  + RE  +  + + 
Sbjct: 683 DIEALARETTMKVLRQK 699



 Score =  242 bits (618), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 117/269 (43%), Positives = 174/269 (64%), Gaps = 19/269 (7%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VPKV WED+G   +VK ++ E VE P +H E F+ +G  PP G+L++GPPG  KTL+ARA
Sbjct: 195  VPKVTWEDIGDLEDVKEKIREIVELPMRHPEVFQHLGIEPPKGVLLYGPPGVGKTLLARA 254

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+E G  F ++ GPE+ SK+ GESE+ +R +F +A  N+P+IIF DEID +A  R +E 
Sbjct: 255  LANEIGAYFTSINGPEIMSKFYGESEQRLREIFEEAEKNSPAIIFIDEIDAIAPKR-EEV 313

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DG+  R  V VI ATNRPD +DPAL RPGRFDR + + PP+  
Sbjct: 314  TG-EVEKRVVAQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPGRFDREIEIRPPDAK 372

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI--- 1005
             R+EI ++H R +P + DV++ +++  + G TGAD++ + REAA++A+   ++  +I   
Sbjct: 373  ARKEILQVHTRNMPLAEDVDLDKISEQTHGYTGADLAALAREAAMNALRRFINERKINLE 432

Query: 1006 --------------TMQHLKTAIRHVQPS 1020
                          TMQ    A++ +QP+
Sbjct: 433  QEQIPVDVLKELKVTMQDFIDAMKFIQPT 461



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 105/213 (49%), Positives = 140/213 (65%), Gaps = 15/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               LG+ P KGVLL+GPPG GKT LAR  A++ G    ++NGPE++S+ YGESEQ L E
Sbjct: 226 VFQHLGIEPPKGVLLYGPPGVGKTLLARALANEIGAYFTSINGPEIMSKFYGESEQRLRE 285

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F+ A +++PA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATN
Sbjct: 286 IFEEAEKNSPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGIKGRGKVIVIGATN 345

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD+++PALRRPGR DREIEI            P   P    R EIL      M  +  D
Sbjct: 346 RPDAVDPALRRPGRFDREIEI-----------RP---PDAKARKEILQVHTRNMPLA-ED 390

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            +++ +S  THG+ GADLAAL  EAA+  LRR+
Sbjct: 391 VDLDKISEQTHGYTGADLAALAREAAMNALRRF 423



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/273 (39%), Positives = 149/273 (54%), Gaps = 33/273 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+RP KG+LL GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ E+
Sbjct: 502 FEKLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREI 561

Query: 496 FDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q+AP V+F DE+D+IAP R    D G  +++R+V  LL+ MDG+   + V+VIAA
Sbjct: 562 FRRARQTAPCVIFFDEIDSIAPMRGFTHDSG--VTERIVNQLLSEMDGIQSLNRVVVIAA 619

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD ++PAL RPGR DR I                 VP P +  R+EIL      +  
Sbjct: 620 TNRPDILDPALLRPGRFDRLI----------------YVPPPDEKARIEILKIYTRTLP- 662

Query: 611 SLLDSEV--EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEG 668
             +DS V  E L+    G+ GAD+ AL  E  +  LR     Q   D L+      + + 
Sbjct: 663 --IDSSVNLEELAKKLEGYTGADIEALARETTMKVLR-----QKYYDCLNKAKKECKDQE 715

Query: 669 HSDTMLQDSDCSRNITESSRDCLDSASPCTSDL 701
            +D  ++    +  I  + +D LD+    T  L
Sbjct: 716 CTDKTIKSCMSNLEIKITMQDFLDTMKIVTPSL 748


>gi|20093359|ref|NP_619434.1| cell division control protein 48 [Methanosarcina acetivorans C2A]
 gi|19918724|gb|AAM07914.1| cell division control protein 48 [Methanosarcina acetivorans C2A]
          Length = 753

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 148/285 (51%), Positives = 201/285 (70%), Gaps = 14/285 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   + PSAMREV +EVP V W+D+GG  + K +L+E+VEWP K+ E FK +  +P
Sbjct: 422  DFREALKNIEPSAMREVYVEVPHVGWDDIGGLDKAKQELIESVEWPLKYPEMFKAVNIKP 481

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+FGPPG  KTL+A+AVASE+  NF+++KGPEL SK+VGESE+A+R  F KA+  A
Sbjct: 482  PRGVLLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAIRETFRKAKQAA 541

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  R   SD   VS+RV+SQ+L ELDG+ +  +V ++AATNRPD +DP
Sbjct: 542  PTVIFFDEIDSIAPERSSVSD-THVSERVVSQILTELDGVEELKDVIIVAATNRPDMVDP 600

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDRL+Y+ PP +  RE+IF IH +  P + DV + ELA ++EG  GADI  IC
Sbjct: 601  ALLRPGRFDRLIYIKPPGKEGREKIFEIHTKGKPLAEDVKLSELAEMTEGYVGADIEGIC 660

Query: 989  REAAISA-------------IEENLDASRITMQHLKTAIRHVQPS 1020
            REAA+ A             I+E     R++ +H + AIR V+P+
Sbjct: 661  REAAMLALREIVTPGTDRKSIKEKAGDVRLSKRHFERAIRRVRPT 705



 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 104/225 (46%), Positives = 151/225 (67%), Gaps = 2/225 (0%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           + +ED+GG R     + E +E P +H E F+++G  PP G+L+ GPPG  KT++A+AVAS
Sbjct: 173 ISYEDIGGLRREIQLVREMIELPMRHPELFQKLGIEPPKGVLLHGPPGTGKTMIAKAVAS 232

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           E   NF+ + GPE+ SK+ GESE+ +R +F +A  +APSIIF DEID +A  RG+ +   
Sbjct: 233 ETDANFITISGPEIVSKYYGESEQKLREIFDEAEKDAPSIIFIDEIDSIAPKRGEVTG-- 290

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +  RV++QLL  +DGL  R  V VIAATNRP+ ID AL R GRFDR + +G P+   R 
Sbjct: 291 EMERRVVAQLLSLMDGLKSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRR 350

Query: 952 EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           +I  IH R +P   +V++ E+A ++ G  GAD+S +C+EAA+ A+
Sbjct: 351 QILLIHTRGMPLEDEVSLGEIADVTHGFVGADLSSLCKEAAMHAL 395



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/239 (47%), Positives = 154/239 (64%), Gaps = 20/239 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLLHGPPGTGKT +A+  A ++  N
Sbjct: 178 IGGLRREIQLVREMIELPMRHPELFQKLGIEPPKGVLLHGPPGTGKTMIAKAVASETDAN 237

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE+VS+ YGESEQ L E+FD A + AP+++FIDE+D+IAP R +   E+ +R+V
Sbjct: 238 FITISGPEIVSKYYGESEQKLREIFDEAEKDAPSIIFIDEIDSIAPKRGEVTGEMERRVV 297

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VIAATNRP+SI+ ALRR GR DREIEI               +
Sbjct: 298 AQLLSLMDGLKSRGEVVVIAATNRPNSIDEALRRGGRFDREIEI--------------GI 343

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYS 648
           P    R +IL     GM    L+ EV    +A  THGFVGADL++LC EAA+  LRR +
Sbjct: 344 PDRNGRRQILLIHTRGMP---LEDEVSLGEIADVTHGFVGADLSSLCKEAAMHALRRIT 399



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/235 (38%), Positives = 136/235 (57%), Gaps = 17/235 (7%)

Query: 413 LGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K +  +++ +           ++ ++P +GVLL GPPGTGKT LA+  A +S  N
Sbjct: 450 IGGLDKAKQELIESVEWPLKYPEMFKAVNIKPPRGVLLFGPPGTGKTLLAKAVASESEAN 509

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRM 530
             ++ GPE++S+  GESE+A+ E F  A Q+AP V+F DE+D+IAP R    +  +S+R+
Sbjct: 510 FISIKGPELLSKYVGESERAIRETFRKAKQAAPTVIFFDEIDSIAPERSSVSDTHVSERV 569

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ +L  +DGV     V+++AATNRPD ++PAL RPGR DR I I               
Sbjct: 570 VSQILTELDGVEELKDVIIVAATNRPDMVDPALLRPGRFDRLIYIKP------------- 616

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            P    R +I      G   +  D ++  L+  T G+VGAD+  +C EAA++ LR
Sbjct: 617 -PGKEGREKIFEIHTKGKPLA-EDVKLSELAEMTEGYVGADIEGICREAAMLALR 669


>gi|448498817|ref|ZP_21611029.1| ATPase AAA [Halorubrum coriense DSM 10284]
 gi|445698183|gb|ELZ50233.1| ATPase AAA [Halorubrum coriense DSM 10284]
          Length = 740

 Score =  310 bits (793), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 148/282 (52%), Positives = 202/282 (71%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  E + Q+ E+VEWP    E F R+G   
Sbjct: 436  DFSGALNEVEPSAMREVLVELPKISWDDVGGLSEAQQQVQESVEWPLTTPEKFDRMGVDA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPSRGQEM-GNNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P++  RE+I  IH    P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDQEGREQILDIHTENTPLAPDVSLREVAEITDGYVGSDLEGIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ ++ DA  + M+H + A+  V+P+   +I +Y E
Sbjct: 675  REAAIEALRDDDDAEEVEMKHFRRAMESVRPTINEDILAYYE 716



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F ++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +        S LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 136/237 (57%), Gaps = 21/237 (8%)

Query: 413 LGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS+ +  + + +    +       +G+   KGVLL+GPPGTGKT +A+  A+++  N
Sbjct: 464 VGGLSEAQQQVQESVEWPLTTPEKFDRMGVDAPKGVLLYGPPGTGKTLMAKAVANETNAN 523

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
             +V GP+++S+  GESE+A+ + F  A Q +P ++F DELD++AP+R ++ G  +S+R+
Sbjct: 524 FISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERV 583

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V  LL  +DG+     V+VI ATNRPD I+PAL R GR DR + I               
Sbjct: 584 VNQLLTELDGLEDMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI--------------G 629

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            P    R +IL       E++ L  +V    +A  T G+VG+DL  +  EAA+  LR
Sbjct: 630 QPDQEGREQILDI---HTENTPLAPDVSLREVAEITDGYVGSDLEGIAREAAIEALR 683


>gi|284173309|ref|ZP_06387278.1| AAA ATPase family protein [Sulfolobus solfataricus 98/2]
 gi|384433872|ref|YP_005643230.1| AAA ATPase [Sulfolobus solfataricus 98/2]
 gi|261602026|gb|ACX91629.1| AAA family ATPase, CDC48 subfamily [Sulfolobus solfataricus 98/2]
          Length = 759

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 145/257 (56%), Positives = 188/257 (73%), Gaps = 1/257 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   ++P+ +REV +EVPKVKWED+GG  E K QL EAVEWP K  E F+
Sbjct: 434 LKVTMQDFIDAMKFIQPTLLREVYVEVPKVKWEDIGGLEEAKQQLREAVEWPLKFPEMFE 493

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           ++G RPP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F 
Sbjct: 494 KLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREIFR 553

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           +AR  AP +IFFDEID +A +RG   D   V++R+++QLL E+DG+     V VIAATNR
Sbjct: 554 RARQTAPCVIFFDEIDSIAPMRGFTHDS-GVTERIVNQLLSEMDGIQSLNRVVVIAATNR 612

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +DPALLRPGRFDRL+YV PP+E  R EI +I+ R +P  S VN+ ELA   EG TGA
Sbjct: 613 PDILDPALLRPGRFDRLIYVPPPDEKARIEILKIYTRTLPIDSSVNLEELAKKLEGYTGA 672

Query: 983 DISLICREAAISAIEEN 999
           DI  + RE  +  + + 
Sbjct: 673 DIEALARETTMKVLRQK 689



 Score =  242 bits (618), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 117/269 (43%), Positives = 174/269 (64%), Gaps = 19/269 (7%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VPKV WED+G   +VK ++ E VE P +H E F+ +G  PP G+L++GPPG  KTL+ARA
Sbjct: 185  VPKVTWEDIGDLEDVKEKIREIVELPMRHPEVFQHLGIEPPKGVLLYGPPGVGKTLLARA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+E G  F ++ GPE+ SK+ GESE+ +R +F +A  N+P+IIF DEID +A  R +E 
Sbjct: 245  LANEIGAYFTSINGPEIMSKFYGESEQRLREIFEEAEKNSPAIIFIDEIDAIAPKR-EEV 303

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DG+  R  V VI ATNRPD +DPAL RPGRFDR + + PP+  
Sbjct: 304  TG-EVEKRVVAQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPGRFDREIEIRPPDAK 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI--- 1005
             R+EI ++H R +P + DV++ +++  + G TGAD++ + REAA++A+   ++  +I   
Sbjct: 363  ARKEILQVHTRNMPLAEDVDLDKISEQTHGYTGADLAALAREAAMNALRRFINERKINLE 422

Query: 1006 --------------TMQHLKTAIRHVQPS 1020
                          TMQ    A++ +QP+
Sbjct: 423  QEQIPVDVLKELKVTMQDFIDAMKFIQPT 451



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 105/213 (49%), Positives = 140/213 (65%), Gaps = 15/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               LG+ P KGVLL+GPPG GKT LAR  A++ G    ++NGPE++S+ YGESEQ L E
Sbjct: 216 VFQHLGIEPPKGVLLYGPPGVGKTLLARALANEIGAYFTSINGPEIMSKFYGESEQRLRE 275

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F+ A +++PA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATN
Sbjct: 276 IFEEAEKNSPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGIKGRGKVIVIGATN 335

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD+++PALRRPGR DREIEI            P   P    R EIL      M  +  D
Sbjct: 336 RPDAVDPALRRPGRFDREIEI-----------RP---PDAKARKEILQVHTRNMPLA-ED 380

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            +++ +S  THG+ GADLAAL  EAA+  LRR+
Sbjct: 381 VDLDKISEQTHGYTGADLAALAREAAMNALRRF 413



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/273 (39%), Positives = 149/273 (54%), Gaps = 33/273 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+RP KG+LL GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ E+
Sbjct: 492 FEKLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREI 551

Query: 496 FDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q+AP V+F DE+D+IAP R    D G  +++R+V  LL+ MDG+   + V+VIAA
Sbjct: 552 FRRARQTAPCVIFFDEIDSIAPMRGFTHDSG--VTERIVNQLLSEMDGIQSLNRVVVIAA 609

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD ++PAL RPGR DR I                 VP P +  R+EIL      +  
Sbjct: 610 TNRPDILDPALLRPGRFDRLI----------------YVPPPDEKARIEILKIYTRTLP- 652

Query: 611 SLLDSEV--EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEG 668
             +DS V  E L+    G+ GAD+ AL  E  +  LR     Q   D L+      + + 
Sbjct: 653 --IDSSVNLEELAKKLEGYTGADIEALARETTMKVLR-----QKYYDCLNKAKKECKDQE 705

Query: 669 HSDTMLQDSDCSRNITESSRDCLDSASPCTSDL 701
            +D  ++    +  I  + +D LD+    T  L
Sbjct: 706 CTDKTIKSCMSNLEIKITMQDFLDTMKIVTPSL 738


>gi|212224263|ref|YP_002307499.1| CDC48/VCP [Thermococcus onnurineus NA1]
 gi|212009220|gb|ACJ16602.1| Hypothetical CDC48/VCP [Thermococcus onnurineus NA1]
          Length = 797

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 153/311 (49%), Positives = 212/311 (68%), Gaps = 21/311 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV+LEVP V+W+D+GG  +VK +L EAVEWP K+ EAF 
Sbjct: 485  LKVTKRDFYEALKMVEPSALREVLLEVPNVRWDDIGGLEDVKQELKEAVEWPLKYPEAFL 544

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A++GPE+ SKWVGESEK +R +F 
Sbjct: 545  GLGITPPKGILLYGPPGTGKTLLAKAVATESEANFIAIRGPEVLSKWVGESEKNIREIFR 604

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VIAATNR
Sbjct: 605  KARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRLINQLLTEMDGIAENSGVVVIAATNR 662

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+ V  P+E  R EIF++H R +P + D+++ ELA  +EG TGA
Sbjct: 663  PDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRNVPLAEDISLEELARRTEGYTGA 722

Query: 983  DISLICREAAISAIEENLDAS---------------RITMQHLKTAIRHVQPS----EIH 1023
            DI+ + REAA+ A+ + L                  ++TM   + A+  + PS     + 
Sbjct: 723  DIAAVVREAAMLAMRKALQEGVIKPGMKADEIKQKVKVTMADFEEALEKIGPSVSKETME 782

Query: 1024 SYKELSAKFQR 1034
             YK++  +F+R
Sbjct: 783  YYKKIQEQFKR 793



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/226 (47%), Positives = 152/226 (67%), Gaps = 2/226 (0%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V +ED+GG ++V  ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179 VTYEDIGGLKDVIQKVREMIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EA  +F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E+ G 
Sbjct: 239 EANAHFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKR-EETHG- 296

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V  RV+SQLL  +DGL  R  V VIAATNRPD IDPAL RPGRFDR L VG P++  R+
Sbjct: 297 EVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGRFDRELEVGVPDKQGRK 356

Query: 952 EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
           EI +IH R +P   +  + ++  + E   G +      + AI  +E
Sbjct: 357 EILQIHTRGMPIEPEFRVSKVKKILENLRGDERFRDVIDRAIEKVE 402



 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/304 (36%), Positives = 166/304 (54%), Gaps = 56/304 (18%)

Query: 310 SWLYSR----SLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNA 365
            WL+SR     ++ G+ + V +L +   F+V      PA +       Q+TE  D     
Sbjct: 114 EWLHSRLVGRPVVRGDYIKVGILGQELTFVVTATT--PAGIV------QITEFTD----- 160

Query: 366 FVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKD 425
           F ++ +       P+  VSK+   G      + ++++           GGL      +++
Sbjct: 161 FTVSEK-------PVKEVSKTAALG------VTYEDI-----------GGLKDVIQKVRE 196

Query: 426 II-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQN 484
           +I +          LG+ P KGVLL+GPPGTGKT LA+  A+++  +   +NGPE++S+ 
Sbjct: 197 MIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKY 256

Query: 485 YGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRT 544
           YGESE+ L EVF  A ++APA++FIDE+DAIAP R++   E+ +R+V+ LL LMDG+   
Sbjct: 257 YGESEERLREVFKEAEENAPAIIFIDEIDAIAPKREETHGEVEKRVVSQLLTLMDGLKSR 316

Query: 545 DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL 604
             V+VIAATNRPD+I+PALRRPGR DRE+E+               VP    R EIL   
Sbjct: 317 GKVIVIAATNRPDAIDPALRRPGRFDRELEV--------------GVPDKQGRKEILQIH 362

Query: 605 LSGM 608
             GM
Sbjct: 363 TRGM 366



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 129/211 (61%), Gaps = 19/211 (9%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
            LG+ P KG+LL+GPPGTGKT LA+  A +S  N   + GPEV+S+  GESE+ + E+F 
Sbjct: 545 GLGITPPKGILLYGPPGTGKTLLAKAVATESEANFIAIRGPEVLSKWVGESEKNIREIFR 604

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            A Q+AP V+FIDE+DAIAP R      ++ R++  LL  MDG+    GV+VIAATNRPD
Sbjct: 605 KARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRLINQLLTEMDGIAENSGVVVIAATNRPD 664

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDS 615
            I+PAL RPGR DR I                 VP+P +  RLEI       +  +  D 
Sbjct: 665 IIDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRNVPLA-EDI 707

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            +E L+  T G+ GAD+AA+  EAA++ +R+
Sbjct: 708 SLEELARRTEGYTGADIAAVVREAAMLAMRK 738


>gi|15920392|ref|NP_376061.1| hypothetical protein ST0209 [Sulfolobus tokodaii str. 7]
          Length = 689

 Score =  309 bits (792), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 137/258 (53%), Positives = 197/258 (76%), Gaps = 1/258 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF KA  ++ PS +RE+ +EVP+V W D+GG  +VK +L E VE+P K++EA++
Sbjct: 353  MEVNMDDFLKAFKEIVPSGLREIYVEVPEVHWSDIGGLEDVKEELREVVEYPLKYREAYE 412

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 413  NVGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 472

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IFFDEID +A +RG  +D   V++R+++QLL E+DG+ +  NV +IAATNR
Sbjct: 473  KARQAAPTVIFFDEIDAIAPMRGLTTDS-GVTERIVNQLLAEMDGIEKLENVVIIAATNR 531

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP++  R EI ++H R +P + D+ + ELA  +EG TGA
Sbjct: 532  PDILDPALLRPGRFDRLIYVPPPDKRARAEILKVHTRNVPLAEDITLDELAEKTEGYTGA 591

Query: 983  DISLICREAAISAIEENL 1000
            D++ + REA + AI E +
Sbjct: 592  DLAALVREATLRAIREEM 609



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 116/231 (50%), Positives = 161/231 (69%), Gaps = 2/231 (0%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V +ED+GG + +  ++ E VE P KH E FKR+G  PP GIL++GPPG  KTL+A+AV
Sbjct: 107  PRVTYEDIGGMKHIIQKIRELVELPLKHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAV 166

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DEID +A  R  E  
Sbjct: 167  ANETEAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEIDAIAPKR-DEVI 225

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R NV VIAATNRP+ +DPAL RPGRFDR + +  P++  
Sbjct: 226  G-EVERRVVAQLLTLMDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQG 284

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            R EI +IH R +P S DV++ +LA ++ G TGAD+S + REAA++A+   L
Sbjct: 285  RLEILQIHTRNMPLSKDVDLEKLAEMTHGYTGADLSALVREAAMNALRRYL 335



 Score =  206 bits (525), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 105/215 (48%), Positives = 142/215 (66%), Gaps = 15/215 (6%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 138 FKRLGIEPPKGILLYGPPGVGKTLLAKAVANETEAYFTSINGPEIMSKFYGESEQRLREI 197

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 198 FEDAKKHAPAIIFIDEIDAIAPKRDEVIGEVERRVVAQLLTLMDGLESRGNVIVIAATNR 257

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREIEI +              P    RLEIL      M  S  D 
Sbjct: 258 PNAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLS-KDV 302

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           ++E L+  THG+ GADL+AL  EAA+  LRRY ++
Sbjct: 303 DLEKLAEMTHGYTGADLSALVREAAMNALRRYLQV 337



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/307 (36%), Positives = 163/307 (53%), Gaps = 45/307 (14%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL  ++  P++ E M+   + F+   +           V   LRE  +   ++ +     
Sbjct: 339 DLNQDKIPPEILEKMEVNMDDFLKAFK---------EIVPSGLREIYVEVPEVHW----- 384

Query: 405 TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
                 S +GGL      L++++      +    ++G+ P KG+LL GPPGTGKT LA+ 
Sbjct: 385 ------SDIGGLEDVKEELREVVEYPLKYREAYENVGIEPPKGILLFGPPGTGKTMLAKA 438

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---K 520
            A +SG N   V GPE++S+  GESE+A+ E+F  A Q+AP V+F DE+DAIAP R    
Sbjct: 439 VATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDAIAPMRGLTT 498

Query: 521 DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           D G  +++R+V  LL  MDG+ + + V++IAATNRPD ++PAL RPGR DR I       
Sbjct: 499 DSG--VTERIVNQLLAEMDGIEKLENVVIIAATNRPDILDPALLRPGRFDRLI------- 549

Query: 581 FSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                     VP P +  R EIL      +  +  D  ++ L+  T G+ GADLAAL  E
Sbjct: 550 ---------YVPPPDKRARAEILKVHTRNVPLA-EDITLDELAEKTEGYTGADLAALVRE 599

Query: 639 AALVCLR 645
           A L  +R
Sbjct: 600 ATLRAIR 606


>gi|448428357|ref|ZP_21584227.1| ATPase AAA [Halorubrum terrestre JCM 10247]
 gi|448453719|ref|ZP_21594062.1| ATPase AAA [Halorubrum litoreum JCM 13561]
 gi|448485739|ref|ZP_21606884.1| ATPase AAA [Halorubrum arcis JCM 13916]
 gi|448511889|ref|ZP_21616268.1| ATPase AAA [Halorubrum distributum JCM 9100]
 gi|448519902|ref|ZP_21618109.1| ATPase AAA [Halorubrum distributum JCM 10118]
 gi|445676526|gb|ELZ29046.1| ATPase AAA [Halorubrum terrestre JCM 10247]
 gi|445694723|gb|ELZ46842.1| ATPase AAA [Halorubrum distributum JCM 9100]
 gi|445703466|gb|ELZ55396.1| ATPase AAA [Halorubrum distributum JCM 10118]
 gi|445807519|gb|EMA57604.1| ATPase AAA [Halorubrum litoreum JCM 13561]
 gi|445817438|gb|EMA67312.1| ATPase AAA [Halorubrum arcis JCM 13916]
          Length = 740

 Score =  309 bits (792), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 148/282 (52%), Positives = 202/282 (71%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W++VGG  E K Q+ E+VEWP    E F R+G   
Sbjct: 436  DFSGALNEVEPSAMREVLVELPKISWDNVGGLEEAKQQVQESVEWPLTSPEKFDRMGVDA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDE+D LA  RG+E  G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTIIFFDELDSLAPSRGQEM-GNNVSERVVNQLLTELDGLEDMGDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P++  RE+I  IH    P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGQPDQEGREQILDIHTEDTPLAPDVSLREVAEITDGYVGSDLEGIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI A+ ++ DA  + M+H + A+  V+P+   +I +Y E
Sbjct: 675  REAAIEALRDDDDAEEVEMKHFRRAMESVRPTINDDILAYYE 716



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F ++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A+  +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +        S LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A + +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +++L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 131/227 (57%), Gaps = 26/227 (11%)

Query: 428 ISSSVKSTLSS------LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
           +  SV+  L+S      +G+   KGVLL+GPPGTGKT +A+  A+++  N  +V GP+++
Sbjct: 474 VQESVEWPLTSPEKFDRMGVDAPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLL 533

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDG 540
           S+  GESE+A+ + F  A Q +P ++F DELD++AP+R ++ G  +S+R+V  LL  +DG
Sbjct: 534 SKWVGESEKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDG 593

Query: 541 VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI 600
           +     V+VI ATNRPD I+PAL R GR DR + I                P    R +I
Sbjct: 594 LEDMGDVMVIGATNRPDMIDPALLRSGRFDRLVMI--------------GQPDQEGREQI 639

Query: 601 LHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           L       E + L  +V    +A  T G+VG+DL  +  EAA+  LR
Sbjct: 640 LDI---HTEDTPLAPDVSLREVAEITDGYVGSDLEGIAREAAIEALR 683


>gi|342306104|dbj|BAK54193.1| ATPase [Sulfolobus tokodaii str. 7]
          Length = 773

 Score =  309 bits (792), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 137/258 (53%), Positives = 197/258 (76%), Gaps = 1/258 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF KA  ++ PS +RE+ +EVP+V W D+GG  +VK +L E VE+P K++EA++
Sbjct: 437  MEVNMDDFLKAFKEIVPSGLREIYVEVPEVHWSDIGGLEDVKEELREVVEYPLKYREAYE 496

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 497  NVGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 556

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IFFDEID +A +RG  +D   V++R+++QLL E+DG+ +  NV +IAATNR
Sbjct: 557  KARQAAPTVIFFDEIDAIAPMRGLTTDS-GVTERIVNQLLAEMDGIEKLENVVIIAATNR 615

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP++  R EI ++H R +P + D+ + ELA  +EG TGA
Sbjct: 616  PDILDPALLRPGRFDRLIYVPPPDKRARAEILKVHTRNVPLAEDITLDELAEKTEGYTGA 675

Query: 983  DISLICREAAISAIEENL 1000
            D++ + REA + AI E +
Sbjct: 676  DLAALVREATLRAIREEM 693



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 116/231 (50%), Positives = 161/231 (69%), Gaps = 2/231 (0%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V +ED+GG + +  ++ E VE P KH E FKR+G  PP GIL++GPPG  KTL+A+AV
Sbjct: 191  PRVTYEDIGGMKHIIQKIRELVELPLKHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAV 250

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DEID +A  R  E  
Sbjct: 251  ANETEAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEIDAIAPKR-DEVI 309

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R NV VIAATNRP+ +DPAL RPGRFDR + +  P++  
Sbjct: 310  G-EVERRVVAQLLTLMDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQG 368

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            R EI +IH R +P S DV++ +LA ++ G TGAD+S + REAA++A+   L
Sbjct: 369  RLEILQIHTRNMPLSKDVDLEKLAEMTHGYTGADLSALVREAAMNALRRYL 419



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 105/215 (48%), Positives = 142/215 (66%), Gaps = 15/215 (6%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 222 FKRLGIEPPKGILLYGPPGVGKTLLAKAVANETEAYFTSINGPEIMSKFYGESEQRLREI 281

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 282 FEDAKKHAPAIIFIDEIDAIAPKRDEVIGEVERRVVAQLLTLMDGLESRGNVIVIAATNR 341

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREIEI +              P    RLEIL      M  S  D 
Sbjct: 342 PNAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLS-KDV 386

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           ++E L+  THG+ GADL+AL  EAA+  LRRY ++
Sbjct: 387 DLEKLAEMTHGYTGADLSALVREAAMNALRRYLQV 421



 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/307 (36%), Positives = 163/307 (53%), Gaps = 45/307 (14%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL  ++  P++ E M+   + F+   +           V   LRE  +   ++ +     
Sbjct: 423 DLNQDKIPPEILEKMEVNMDDFLKAFK---------EIVPSGLREIYVEVPEVHW----- 468

Query: 405 TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
                 S +GGL      L++++      +    ++G+ P KG+LL GPPGTGKT LA+ 
Sbjct: 469 ------SDIGGLEDVKEELREVVEYPLKYREAYENVGIEPPKGILLFGPPGTGKTMLAKA 522

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---K 520
            A +SG N   V GPE++S+  GESE+A+ E+F  A Q+AP V+F DE+DAIAP R    
Sbjct: 523 VATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDAIAPMRGLTT 582

Query: 521 DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           D G  +++R+V  LL  MDG+ + + V++IAATNRPD ++PAL RPGR DR I       
Sbjct: 583 DSG--VTERIVNQLLAEMDGIEKLENVVIIAATNRPDILDPALLRPGRFDRLI------- 633

Query: 581 FSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                     VP P +  R EIL      +  +  D  ++ L+  T G+ GADLAAL  E
Sbjct: 634 ---------YVPPPDKRARAEILKVHTRNVPLA-EDITLDELAEKTEGYTGADLAALVRE 683

Query: 639 AALVCLR 645
           A L  +R
Sbjct: 684 ATLRAIR 690


>gi|15679634|ref|NP_276751.1| cell division control protein Cdc48 [Methanothermobacter
            thermautotrophicus str. Delta H]
 gi|2622767|gb|AAB86112.1| cell division control protein Cdc48 [Methanothermobacter
            thermautotrophicus str. Delta H]
          Length = 732

 Score =  309 bits (791), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 142/272 (52%), Positives = 198/272 (72%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +++PSA+REV+++VP V W+D+GG    K +L EAVEWP K+ + FK+ G RP
Sbjct: 451  DFKDALKEIQPSALREVLVQVPNVSWDDIGGLEGAKQELREAVEWPLKYPDRFKKFGIRP 510

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+ G PG  KTL+A+AVA+E+  NF+AVKGPEL SKWVGESEK VR +F KAR  A
Sbjct: 511  PKGILLHGSPGTGKTLLAKAVANESQANFIAVKGPELLSKWVGESEKGVREVFRKARQTA 570

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A++R   +    V+ RV++QLL E+DGL +  +V VIAATNRPD +DP
Sbjct: 571  PTVIFFDEIDSIASVRSGSTADSGVTQRVVNQLLTEIDGLEELQDVAVIAATNRPDILDP 630

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDR + V  P++  R  IFR+H + +P + DV++ +LA  +EG  GADI  +C
Sbjct: 631  ALLRPGRFDRHVKVEDPDKEARLAIFRVHTKDMPLADDVDLEKLAEKTEGYVGADIEAVC 690

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAA+  + +N+DA  ++M++   A+  V+P 
Sbjct: 691  REAAMLTLRDNMDAEEVSMKYFLEAMEKVKPK 722



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 117/266 (43%), Positives = 168/266 (63%), Gaps = 16/266 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG +E   ++ E +E P K  E F+R+G  PP G+LM GPPG  KTL+A+AVA+
Sbjct: 202  VTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGITPPKGVLMHGPPGTGKTLLAKAVAN 261

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F+A+ GPE+ SK+VG SE+ +R  F +A  NAPSIIF DEID +A  R  E    
Sbjct: 262  ESDAHFIAINGPEIMSKYVGGSEERLREFFEEAEENAPSIIFIDEIDAIAPKR--EDVSG 319

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R+++QLL  +DGL  R  V VI ATNRPD +DPAL RPGRFDR + +G P+  +R+
Sbjct: 320  EVERRIVAQLLTLMDGLKSRGQVVVIGATNRPDALDPALRRPGRFDREIEIGVPDREERK 379

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI +IH R +P + DV++ ELA ++ G  GAD+  +C+E+A+  +              +
Sbjct: 380  EILQIHTRGMPLADDVDLDELAEITHGFVGADLESLCKESAMRVLRRVLPEIKADEEIPK 439

Query: 998  ENLDASRITMQHLKTAIRHVQPSEIH 1023
            E L    +T    K A++ +QPS + 
Sbjct: 440  EVLKKMVVTRADFKDALKEIQPSALR 465



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/265 (43%), Positives = 162/265 (61%), Gaps = 26/265 (9%)

Query: 393 PNAQIEFQN----------VQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGL 441
           P+ Q+E Q           V+  V+     +GGL +E   ++++I I          LG+
Sbjct: 177 PSTQVEMQQKPVDVSKLEGVKNLVDVTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGI 236

Query: 442 RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
            P KGVL+HGPPGTGKT LA+  A++S  +   +NGPE++S+  G SE+ L E F+ A +
Sbjct: 237 TPPKGVLMHGPPGTGKTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLREFFEEAEE 296

Query: 502 SAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           +AP+++FIDE+DAIAP R+D   E+ +R+VA LL LMDG+     V+VI ATNRPD+++P
Sbjct: 297 NAPSIIFIDEIDAIAPKREDVSGEVERRIVAQLLTLMDGLKSRGQVVVIGATNRPDALDP 356

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
           ALRRPGR DREIEI               VP   +R EIL     GM  +  D +++ L+
Sbjct: 357 ALRRPGRFDREIEI--------------GVPDREERKEILQIHTRGMPLA-DDVDLDELA 401

Query: 622 MATHGFVGADLAALCNEAALVCLRR 646
             THGFVGADL +LC E+A+  LRR
Sbjct: 402 EITHGFVGADLESLCKESAMRVLRR 426



 Score =  167 bits (424), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/214 (43%), Positives = 127/214 (59%), Gaps = 21/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+RP KG+LLHG PGTGKT LA+  A++S  N   V GPE++S+  GESE+ + EV
Sbjct: 503 FKKFGIRPPKGILLHGSPGTGKTLLAKAVANESQANFIAVKGPELLSKWVGESEKGVREV 562

Query: 496 FDSASQSAPAVVFIDELDAIAPARK----DGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           F  A Q+AP V+F DE+D+IA  R     D G  ++QR+V  LL  +DG+     V VIA
Sbjct: 563 FRKARQTAPTVIFFDEIDSIASVRSGSTADSG--VTQRVVNQLLTEIDGLEELQDVAVIA 620

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD ++PAL RPGR DR ++++               P    RL I       M  +
Sbjct: 621 ATNRPDILDPALLRPGRFDRHVKVED--------------PDKEARLAIFRVHTKDMPLA 666

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++E L+  T G+VGAD+ A+C EAA++ LR
Sbjct: 667 -DDVDLEKLAEKTEGYVGADIEAVCREAAMLTLR 699


>gi|408381747|ref|ZP_11179295.1| AAA ATPase [Methanobacterium formicicum DSM 3637]
 gi|407815678|gb|EKF86248.1| AAA ATPase [Methanobacterium formicicum DSM 3637]
          Length = 732

 Score =  309 bits (791), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 142/273 (52%), Positives = 198/273 (72%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A  +V+PSA+REV+++VP VKWED+GG  + K +L EAVEWP K+ E+F + G  P
Sbjct: 452  DFKEALKEVQPSALREVLVQVPDVKWEDIGGLEDAKQELREAVEWPLKYPESFDKFGVTP 511

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+E+  NF+AVKGPEL SKWVGESEK VR +F KAR  A
Sbjct: 512  PRGVLIYGPPGTGKTLLAKAVANESKANFIAVKGPELLSKWVGESEKGVREVFRKARQTA 571

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A+ R   S    V+ RV++QLL E+DGL +  +V VIAATNR D +DP
Sbjct: 572  PTVIFFDEIDSIASARSGASSDSGVTQRVVNQLLTEIDGLEELQDVAVIAATNRVDIMDP 631

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDR + V  P+E  R  IF++H + +P + DV++  LA  +E   GADI  +C
Sbjct: 632  ALLRPGRFDRHVKVNDPDEEARLAIFKVHTKNMPLADDVDLEYLAKSTEKYVGADIEAVC 691

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSE 1021
            REA +  + ++L A ++ M++ K A++ V+  E
Sbjct: 692  REAVMLTLRDDLKAEQVKMKYFKKAMKKVKTEE 724



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/266 (42%), Positives = 165/266 (62%), Gaps = 16/266 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG +E   ++ E +E P K  E F+R+G  PP G+LM GPPG  KTL+A+AVA+
Sbjct: 203  VTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGISPPKGVLMHGPPGTGKTLLAKAVAN 262

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F+A++GPE+ SK+VG SE+ +R  F +A  NAPSI+F DEID +A  R +E  G 
Sbjct: 263  ESDAHFIAIQGPEIMSKYVGGSEEKLREFFEEAEENAPSIVFIDEIDAIAPKR-EEVSG- 320

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                RV++QLL  +DGL  R  V VI ATNRPD +D AL R GRFDR + +G P++  R+
Sbjct: 321  ETERRVVAQLLTLMDGLKTRGQVVVIGATNRPDALDSALRRGGRFDREIEIGVPDKDGRQ 380

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            E+ +IH R +P    V++ E+A  + G  GAD+ ++C+EAA+  +              +
Sbjct: 381  EVLQIHTRGMPLDDKVDLDEIADTTHGFVGADLEMLCKEAAMRVLRRVLPDIKADEEIPK 440

Query: 998  ENLDASRITMQHLKTAIRHVQPSEIH 1023
            E L    I     K A++ VQPS + 
Sbjct: 441  ETLKKMIIKKSDFKEALKEVQPSALR 466



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/252 (44%), Positives = 152/252 (60%), Gaps = 20/252 (7%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           + + V+  V+     +GGL +E   ++++I I          LG+ P KGVL+HGPPGTG
Sbjct: 193 KLEGVKTLVDVTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGISPPKGVLMHGPPGTG 252

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A++S  +   + GPE++S+  G SE+ L E F+ A ++AP++VFIDE+DAIA
Sbjct: 253 KTLLAKAVANESDAHFIAIQGPEIMSKYVGGSEEKLREFFEEAEENAPSIVFIDEIDAIA 312

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R++   E  +R+VA LL LMDG+     V+VI ATNRPD+++ ALRR GR DREIEI 
Sbjct: 313 PKREEVSGETERRVVAQLLTLMDGLKTRGQVVVIGATNRPDALDSALRRGGRFDREIEI- 371

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAA 634
                         VP    R E+L     GM    LD +V+   +A  THGFVGADL  
Sbjct: 372 -------------GVPDKDGRQEVLQIHTRGMP---LDDKVDLDEIADTTHGFVGADLEM 415

Query: 635 LCNEAALVCLRR 646
           LC EAA+  LRR
Sbjct: 416 LCKEAAMRVLRR 427



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 17/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           +    G+ P +GVL++GPPGTGKT LA+  A++S  N   V GPE++S+  GESE+ + E
Sbjct: 503 SFDKFGVTPPRGVLIYGPPGTGKTLLAKAVANESKANFIAVKGPELLSKWVGESEKGVRE 562

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A Q+AP V+F DE+D+IA AR     +  ++QR+V  LL  +DG+     V VIAA
Sbjct: 563 VFRKARQTAPTVIFFDEIDSIASARSGASSDSGVTQRVVNQLLTEIDGLEELQDVAVIAA 622

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNR D ++PAL RPGR DR ++++               P    RL I       M  + 
Sbjct: 623 TNRVDIMDPALLRPGRFDRHVKVND--------------PDEEARLAIFKVHTKNMPLA- 667

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D ++EYL+ +T  +VGAD+ A+C EA ++ LR
Sbjct: 668 DDVDLEYLAKSTEKYVGADIEAVCREAVMLTLR 700


>gi|448352560|ref|ZP_21541343.1| ATPase AAA [Natrialba hulunbeirensis JCM 10989]
 gi|445642622|gb|ELY95689.1| ATPase AAA [Natrialba hulunbeirensis JCM 10989]
          Length = 742

 Score =  309 bits (791), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 146/282 (51%), Positives = 204/282 (72%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PK+ W+DVGG  + K Q+ E+VEWP  +   F R+G  P
Sbjct: 436  DFRGALGEVEPSAMREVLVELPKISWDDVGGLHDAKEQVQESVEWPLNNPGRFSRLGIDP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E+ G +VS+RV++QLL ELDGL +  +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDALAPGRGGET-GSNVSERVVNQLLTELDGLEEMEDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ +G P+   RE I  IH + +P ++DV +RE+A +++G  G+D+  I 
Sbjct: 615  ALLRSGRFDRLVMIGEPDVDGRERILDIHTQDMPLAADVTLREVAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            REAAI ++ E+ +A  + M+H + A+ +V+P+   +I  Y E
Sbjct: 675  REAAIESLREDHEADIVEMRHFRQAMENVRPTITDDILDYYE 716



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/229 (47%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEVGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV +  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVALSHLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGREEILQIHTRGMPLS-DDVALSHLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FSRLGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELDA+AP R  GGE    +S+R+V  LL  +DG+   + V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDALAPGR--GGETGSNVSERVVNQLLTELDGLEEMEDVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + I                P    R  IL      M  + 
Sbjct: 606 TNRPDMIDPALLRSGRFDRLVMI--------------GEPDVDGRERILDIHTQDMPLA- 650

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D  +  ++  T G+VG+DL ++  EAA+  LR
Sbjct: 651 ADVTLREVAEITDGYVGSDLESIAREAAIESLR 683


>gi|390961725|ref|YP_006425559.1| cell division protein containing CDC48 domain 1 [Thermococcus sp.
            CL1]
 gi|390520033|gb|AFL95765.1| cell division protein containing CDC48 domain 1 [Thermococcus sp.
            CL1]
          Length = 795

 Score =  309 bits (791), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 153/311 (49%), Positives = 209/311 (67%), Gaps = 21/311 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV+LEVP V+WED+GG  +VK +L EAVEWP K+ EAF 
Sbjct: 484  LKVTRKDFYEALKMVEPSALREVLLEVPNVRWEDIGGLEDVKEELREAVEWPLKYPEAFL 543

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A+KGPE+ SKWVGESEK +R +F 
Sbjct: 544  GLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNIREIFR 603

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VI ATNR
Sbjct: 604  KARQAAPTVIFIDEIDAIAPRRG--TDVNRVTDRLINQLLTEMDGIQENSGVVVIGATNR 661

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV + ELA  +EG TGA
Sbjct: 662  PDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRNVPLAEDVKLEELAKRTEGYTGA 721

Query: 983  DISLICREAAISAIEENLDAS---------------RITMQHLKTAIRHVQPS----EIH 1023
            DI  + REAA+ A+   L                  ++TM+  + A++ + PS     + 
Sbjct: 722  DIEAVVREAAMLAMRRALQKGIIRPGMRADEIRAKVKVTMKDFEEAMKKIGPSVSEETME 781

Query: 1024 SYKELSAKFQR 1034
             Y+ +  +F++
Sbjct: 782  YYRRVQEQFKQ 792



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 102/195 (52%), Positives = 138/195 (70%), Gaps = 2/195 (1%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V +ED+GG  +V  ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179 VTYEDIGGLSDVIQKVREMIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EA  +F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E+ G 
Sbjct: 239 EANAHFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKR-EETHG- 296

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V  RV+SQLL  +DGL  R  V VI ATNRPD IDPAL RPGRFDR L VG P++  R+
Sbjct: 297 EVEKRVVSQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDRELEVGVPDKQGRK 356

Query: 952 EIFRIHLRKIPCSSD 966
           EI +IH R +P   +
Sbjct: 357 EILQIHTRGMPIEPE 371



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 91/197 (46%), Positives = 126/197 (63%), Gaps = 15/197 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS     ++++I +          LG+ P KGVLL+GPPGTGKT LA+  A+++  +
Sbjct: 184 IGGLSDVIQKVREMIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAH 243

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +NGPE++S+ YGESE+ L EVF  A ++APA++FIDE+DAIAP R++   E+ +R+V
Sbjct: 244 FIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKREETHGEVEKRVV 303

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRPD+I+PALRRPGR DRE+E+               V
Sbjct: 304 SQLLTLMDGLKSRGKVIVIGATNRPDAIDPALRRPGRFDRELEV--------------GV 349

Query: 592 PSPAQRLEILHALLSGM 608
           P    R EIL     GM
Sbjct: 350 PDKQGRKEILQIHTRGM 366



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 19/211 (9%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
            LG+ P KG+LL+GPPGTGKT LA+  A++S  N   + GPEV+S+  GESE+ + E+F 
Sbjct: 544 GLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNIREIFR 603

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            A Q+AP V+FIDE+DAIAP R      ++ R++  LL  MDG+    GV+VI ATNRPD
Sbjct: 604 KARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRLINQLLTEMDGIQENSGVVVIGATNRPD 663

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDS 615
            I+PAL RPGR DR I                 VP+P +  RLEI       +  +  D 
Sbjct: 664 IIDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRNVPLA-EDV 706

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++E L+  T G+ GAD+ A+  EAA++ +RR
Sbjct: 707 KLEELAKRTEGYTGADIEAVVREAAMLAMRR 737


>gi|448735013|ref|ZP_21717232.1| ATPase AAA [Halococcus salifodinae DSM 8989]
 gi|445799067|gb|EMA49449.1| ATPase AAA [Halococcus salifodinae DSM 8989]
          Length = 741

 Score =  309 bits (791), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 144/272 (52%), Positives = 199/272 (73%), Gaps = 1/272 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W+DVGG  + K ++ EAVEWP    E F R+G  P
Sbjct: 436  DFDGALNEVSPSAMREVLVELPKISWDDVGGLDDAKGEVKEAVEWPLSSPERFSRLGIEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG +  G +VS+RV++QLL ELDGL    NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPSRGGDV-GSNVSERVVNQLLTELDGLEDMKNVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG P+   RE+I  IH    P ++DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMVGQPDVEGREQILGIHTDDTPLTADVSLREMAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAAI A+ ++ +A  + M+H + A+  V+P+
Sbjct: 675  REAAIHALRDDPEAETVAMRHFRAALESVRPT 706



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLGSEIQRVREMVELPMKHPQVFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDERGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DVN+  LA  + G  GADI  + +E+A+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVNLANLADETHGFVGADIESLTKESAMKALRRYL 412



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLGSEIQRVREMVELPMKHPQVFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  E+A+  LRRY
Sbjct: 357 PDERGREEILQIHTRGMPLS-DDVNLANLADETHGFVGADIESLTKESAMKALRRY 411



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 141/246 (57%), Gaps = 25/246 (10%)

Query: 413 LGGLSKEYAILKDII---ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           +GGL      +K+ +   +SS  +   S LG+ P  GVLL+GPPGTGKT +A+  A+++ 
Sbjct: 464 VGGLDDAKGEVKEAVEWPLSSPER--FSRLGIEPPSGVLLYGPPGTGKTLMAKAVANETN 521

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQ 528
            N  +V GP+++S+  GESE+A+ + F  A Q +P V+F DELD++AP+R  D G  +S+
Sbjct: 522 ANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTVIFFDELDSLAPSRGGDVGSNVSE 581

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V  LL  +DG+     V+VI ATNRPD I+PAL R GR DR + +             
Sbjct: 582 RVVNQLLTELDGLEDMKNVMVIGATNRPDMIDPALIRSGRFDRLVMV------------- 628

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
              P    R +IL       + + L ++V    MA  T G+VG+DL ++  EAA+  LR 
Sbjct: 629 -GQPDVEGREQILGI---HTDDTPLTADVSLREMAEITDGYVGSDLESIAREAAIHALRD 684

Query: 647 YSKIQT 652
             + +T
Sbjct: 685 DPEAET 690


>gi|448738702|ref|ZP_21720723.1| ATPase AAA [Halococcus thailandensis JCM 13552]
 gi|445801088|gb|EMA51432.1| ATPase AAA [Halococcus thailandensis JCM 13552]
          Length = 741

 Score =  308 bits (790), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 206/289 (71%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W DVGG  + K +L EAVEWP    E F R+G  P
Sbjct: 436  DFDGALNEVEPSAMREVLVELPKITWGDVGGLEDAKGELKEAVEWPLSSPERFSRLGIEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFKKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG +  G +VS+RV++QLL ELDGL    +V V+AATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPSRGGDM-GSNVSERVVNQLLTELDGLEDMKDVMVVAATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG P+   RE I  IH    P ++DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMVGQPSIEGRERILSIHTDDTPLAADVSLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ ++ DA+ + M+H ++A+  V+P+     +  Y  ++ +F+
Sbjct: 675  REAAIQALRDDPDATVVEMRHFRSALETVRPTITEDILDYYDRMAEEFK 723



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDERGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DVN+  LA  + G  GADI  + +E+A+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVNLSGLADETHGFVGADIESLTKESAMKALRRYL 412



 Score =  209 bits (531), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/236 (46%), Positives = 151/236 (63%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  E+A+  LRRY
Sbjct: 357 PDERGREEILQIHTRGMPLS-DDVNLSGLADETHGFVGADIESLTKESAMKALRRY 411



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/239 (39%), Positives = 139/239 (58%), Gaps = 25/239 (10%)

Query: 413 LGGLSKEYAILKDII---ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           +GGL      LK+ +   +SS  +   S LG+ P  GVLL+GPPGTGKT +A+  A+++ 
Sbjct: 464 VGGLEDAKGELKEAVEWPLSSPER--FSRLGIEPPAGVLLYGPPGTGKTLMAKAVANETN 521

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQ 528
            N  +V GP+++S+  GESE+A+ + F  A Q +P V+F DELD++AP+R  D G  +S+
Sbjct: 522 ANFISVRGPQLLSKWVGESEKAIRQTFKKARQVSPTVIFFDELDSLAPSRGGDMGSNVSE 581

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V  LL  +DG+     V+V+AATNRPD I+PAL R GR DR + +             
Sbjct: 582 RVVNQLLTELDGLEDMKDVMVVAATNRPDMIDPALIRSGRFDRLVMV------------- 628

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
              PS   R  IL       + + L ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 629 -GQPSIEGRERILSI---HTDDTPLAADVSLREIAEITDGYVGSDLESIAREAAIQALR 683


>gi|448731245|ref|ZP_21713548.1| ATPase AAA [Halococcus saccharolyticus DSM 5350]
 gi|445792839|gb|EMA43440.1| ATPase AAA [Halococcus saccharolyticus DSM 5350]
          Length = 741

 Score =  308 bits (790), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 144/272 (52%), Positives = 199/272 (73%), Gaps = 1/272 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +V PSAMREV++E+PK+ W+DVGG  + K ++ E+VEWP    E F R+G  P
Sbjct: 436  DFDGALNEVSPSAMREVLVELPKISWDDVGGLDDAKGEVKESVEWPLSSPERFSRLGIEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P+G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E  G +VS+RV++QLL ELDGL    NV VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPSRGGEV-GSNVSERVVNQLLTELDGLEDMKNVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG P+   RE+I  IH    P ++DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMVGQPDVEGREQILGIHTDDTPLAADVSLREMAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAAI A+ ++ +A  + M+H + A+  V+P+
Sbjct: 675  REAAIHALRDDPEAETVAMRHFRAALESVRPT 706



 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 107/229 (46%), Positives = 150/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLSNEIQRVREMVELPMKHPQVFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +P+IIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPAIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDERGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DVN+ +LA  + G  GADI  + +E+A+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVNLADLADETHGFVGADIESLTKESAMKALRRYL 412



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLSNEIQRVREMVELPMKHPQVFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +PA++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPAIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  +  L+  THGFVGAD+ +L  E+A+  LRRY
Sbjct: 357 PDERGREEILQIHTRGMPLS-DDVNLADLADETHGFVGADIESLTKESAMKALRRY 411



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 130/222 (58%), Gaps = 24/222 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FSRLGIEPPSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE---ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q +P V+F DELD++AP+R  GGE    +S+R+V  LL  +DG+     V+VI A
Sbjct: 548 FRKARQVSPTVIFFDELDSLAPSR--GGEVGSNVSERVVNQLLTELDGLEDMKNVMVIGA 605

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + +                P    R +IL       + + 
Sbjct: 606 TNRPDMIDPALIRSGRFDRLVMV--------------GQPDVEGREQILGI---HTDDTP 648

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQT 652
           L ++V    MA  T G+VG+DL ++  EAA+  LR   + +T
Sbjct: 649 LAADVSLREMAEITDGYVGSDLESIAREAAIHALRDDPEAET 690


>gi|148703169|gb|EDL35116.1| spermatogenesis associated 5, isoform CRA_b [Mus musculus]
          Length = 406

 Score =  308 bits (790), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 146/291 (50%), Positives = 204/291 (70%), Gaps = 7/291 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L DF +    +RPSAMREV        W D+GG   +K +L +AVEWP KH ++F 
Sbjct: 115  VKITLNDFLQGMNDIRPSAMREV-------SWSDIGGLENIKLKLKQAVEWPLKHPKSFN 167

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F 
Sbjct: 168  RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 227

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  NVTV+AATNR
Sbjct: 228  KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 287

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD+ID AL+RPGR DR++YV  P+   R EI  +    +P S++V++ EL   ++  +GA
Sbjct: 288  PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGA 347

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            +I  +C+EAA+ A+EEN+ A  I  +H   A+  V P    S +     +Q
Sbjct: 348  EIIAVCKEAALLALEENIKADCIMKRHFTEALSIVTPRIPESLRRFYEDYQ 398



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 130/213 (61%), Gaps = 17/213 (7%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
            + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ 
Sbjct: 164 KSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVR 223

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           E+F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+A
Sbjct: 224 EIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLA 283

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+ AL RPGR+DR I + +              P  A R EIL+     M  S
Sbjct: 284 ATNRPDRIDKALMRPGRIDRIIYVPL--------------PDAATRREILNLQFHSMPIS 329

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             + +++ L + T  + GA++ A+C EAAL+ L
Sbjct: 330 -NEVDLDELVLQTDTYSGAEIIAVCKEAALLAL 361



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/118 (44%), Positives = 70/118 (59%), Gaps = 19/118 (16%)

Query: 538 MDGVCRTDG----VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPS 593
           MDG+  ++G    VLV+ ATNRP +++ ALRRPGR D+EIEI               +P+
Sbjct: 1   MDGIG-SEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI--------------GIPN 45

Query: 594 PAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
              RL+IL  LL  + H L  +E+  L+   HG+VGADL ALCNEA L  LRR  + Q
Sbjct: 46  AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQ 103



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 13/123 (10%)

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP-CSSDVNIREL 972
            V V+ ATNRP  +D AL RPGRFD+ + +G PN  DR +I +  LR++P   +   +  L
Sbjct: 13   VLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRL 72

Query: 973  ACLSEGCTGADISLICREAAISAI------EENLDAS------RITMQHLKTAIRHVQPS 1020
            A  + G  GAD+  +C EA + A+      + NL  S      +IT+      +  ++PS
Sbjct: 73   ANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPS 132

Query: 1021 EIH 1023
             + 
Sbjct: 133  AMR 135


>gi|409723321|ref|ZP_11270598.1| ATPase AAA [Halococcus hamelinensis 100A6]
 gi|448722934|ref|ZP_21705462.1| ATPase AAA [Halococcus hamelinensis 100A6]
 gi|445788601|gb|EMA39310.1| ATPase AAA [Halococcus hamelinensis 100A6]
          Length = 741

 Score =  308 bits (790), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 146/272 (53%), Positives = 197/272 (72%), Gaps = 1/272 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE A   V PSAMREV++E+PKV W DVGG  + K ++ E+VEWP  + E F R+G  P
Sbjct: 436  DFEGALGGVDPSAMREVLVELPKVSWGDVGGLDDAKGEIKESVEWPLSNPERFSRLGIEP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTLMA+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFKKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG +  G +VS+RV++QLL ELDGL    NV VIAATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPARGGDV-GSNVSERVVNQLLTELDGLEDMKNVMVIAATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG P+   RE I  IH    P ++DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMVGQPDVEGRERILNIHTGATPLAADVSLREIAEVTDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAAI A+ ++ +A  + M+H + A+  V+P+
Sbjct: 675  REAAIQALRDDPEADTVEMRHFRGALESVRPT 706



 Score =  219 bits (558), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 108/229 (47%), Positives = 150/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + F+++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQSEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   APSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDASEEAPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+E  RE
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDERGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +E+A+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLSHLADETHGFVGADIESLTKESAMKALRRYL 412



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQSEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ AS+ AP+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDASEEAPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  + +L+  THGFVGAD+ +L  E+A+  LRRY
Sbjct: 357 PDERGREEILQIHTRGMPLS-DDVSLSHLADETHGFVGADIESLTKESAMKALRRY 411



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 133/229 (58%), Gaps = 17/229 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 488 FSRLGIEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q +P V+F DELD++APAR  D G  +S+R+V  LL  +DG+     V+VIAATN
Sbjct: 548 FKKARQVSPTVIFFDELDSLAPARGGDVGSNVSERVVNQLLTELDGLEDMKNVMVIAATN 607

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PAL R GR DR + +                P    R  IL+ + +G      D
Sbjct: 608 RPDMIDPALIRSGRFDRLVMV--------------GQPDVEGRERILN-IHTGATPLAAD 652

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTL 663
             +  ++  T G+VG+DL ++  EAA+  LR   +  T  ++ H  G L
Sbjct: 653 VSLREIAEVTDGYVGSDLESIAREAAIQALRDDPEADT-VEMRHFRGAL 700


>gi|222445802|ref|ZP_03608317.1| hypothetical protein METSMIALI_01445 [Methanobrevibacter smithii DSM
            2375]
 gi|222435367|gb|EEE42532.1| AAA family ATPase, CDC48 subfamily [Methanobrevibacter smithii DSM
            2375]
          Length = 740

 Score =  308 bits (790), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 140/272 (51%), Positives = 195/272 (71%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +++PSA+REV+++VP VKW+DVGG  +VK +L EAVEWP KH E F++ G RP
Sbjct: 459  DFKSALKEIQPSALREVLVQVPNVKWDDVGGLDDVKQELKEAVEWPLKHPEKFEKFGVRP 518

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G L++G PG  KTL+A+AVASE+  NF+++KGPEL SKWVGESE+ VR +F KA+  A
Sbjct: 519  PKGTLLYGVPGTGKTLLAKAVASESEANFISIKGPELLSKWVGESEQGVREVFRKAKQTA 578

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A+ R        V+ RV++QLL E+DGL +  +V +IAATNRPD +D 
Sbjct: 579  PTVIFFDEIDSIASTRSANDSDSGVTKRVVNQLLTEMDGLEELEDVAIIAATNRPDILDA 638

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
             L+RPGRFDR + V  PNE  R  IF++H   +P + DV++ +LA  ++G  GADI  +C
Sbjct: 639  GLMRPGRFDRHIKVDLPNEDARLSIFKVHTEGMPLADDVSLEKLAKQTDGYVGADIEAVC 698

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAA+  +  NLDA  +  ++ K A+  V+PS
Sbjct: 699  REAAMLTLRNNLDAENVPYKYFKEALEKVKPS 730



 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 115/263 (43%), Positives = 165/263 (62%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG ++   ++ E +E P K  E F ++G  PP G+LM GPPG  KTL+A+AVAS
Sbjct: 210  VSYEDIGGLKDEVKKVREMIEIPLKRPELFDKLGIAPPKGVLMHGPPGTGKTLLAKAVAS 269

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F+A+ GPE+ SK+VG SE+ +R  F +A  NAPSIIF DE+D +A  R +++ G 
Sbjct: 270  ESDAHFIAINGPEIMSKYVGGSEENLREYFEEAEENAPSIIFIDELDAIAPKR-EDTQG- 327

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                R ++QLL  +DGL  R  V VI ATNRPD +D AL RPGRFDR + +G P+  +RE
Sbjct: 328  ETERRTVAQLLTLMDGLKSRGQVVVIGATNRPDSLDQALRRPGRFDREIEIGVPDSEERE 387

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI  IH R +P + DV++ +LA  + G  GAD+  +C+EAA+  +              E
Sbjct: 388  EILEIHTRNMPLAEDVDLHKLASTTHGFVGADLESLCKEAAMRVVRRIIPEIKNDEEIPE 447

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E L    +T    K+A++ +QPS
Sbjct: 448  EVLKKIVVTNDDFKSALKEIQPS 470



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/265 (43%), Positives = 154/265 (58%), Gaps = 26/265 (9%)

Query: 393 PNAQIEF----------QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGL 441
           PN ++E           + V   V+     +GGL  E   ++++I I          LG+
Sbjct: 185 PNTEVELHESPVDVSNIEGVTNLVDVSYEDIGGLKDEVKKVREMIEIPLKRPELFDKLGI 244

Query: 442 RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
            P KGVL+HGPPGTGKT LA+  A +S  +   +NGPE++S+  G SE+ L E F+ A +
Sbjct: 245 APPKGVLMHGPPGTGKTLLAKAVASESDAHFIAINGPEIMSKYVGGSEENLREYFEEAEE 304

Query: 502 SAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           +AP+++FIDELDAIAP R+D   E  +R VA LL LMDG+     V+VI ATNRPDS++ 
Sbjct: 305 NAPSIIFIDELDAIAPKREDTQGETERRTVAQLLTLMDGLKSRGQVVVIGATNRPDSLDQ 364

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
           ALRRPGR DREIEI               VP   +R EIL      M  +  D ++  L+
Sbjct: 365 ALRRPGRFDREIEI--------------GVPDSEEREEILEIHTRNMPLA-EDVDLHKLA 409

Query: 622 MATHGFVGADLAALCNEAALVCLRR 646
             THGFVGADL +LC EAA+  +RR
Sbjct: 410 STTHGFVGADLESLCKEAAMRVVRR 434



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 17/212 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+RP KG LL+G PGTGKT LA+  A +S  N  ++ GPE++S+  GESEQ + EV
Sbjct: 511 FEKFGVRPPKGTLLYGVPGTGKTLLAKAVASESEANFISIKGPELLSKWVGESEQGVREV 570

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q+AP V+F DE+D+IA  R   D    +++R+V  LL  MDG+   + V +IAAT
Sbjct: 571 FRKAKQTAPTVIFFDEIDSIASTRSANDSDSGVTKRVVNQLLTEMDGLEELEDVAIIAAT 630

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD ++  L RPGR DR I++D+              P+   RL I      GM  +  
Sbjct: 631 NRPDILDAGLMRPGRFDRHIKVDL--------------PNEDARLSIFKVHTEGMPLA-D 675

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D  +E L+  T G+VGAD+ A+C EAA++ LR
Sbjct: 676 DVSLEKLAKQTDGYVGADIEAVCREAAMLTLR 707


>gi|298676049|ref|YP_003727799.1| AAA ATPase [Methanohalobium evestigatum Z-7303]
 gi|298289037|gb|ADI75003.1| AAA family ATPase, CDC48 subfamily [Methanohalobium evestigatum
            Z-7303]
          Length = 741

 Score =  308 bits (790), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 140/303 (46%), Positives = 215/303 (70%), Gaps = 4/303 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE A +++ PSA+REV++E+P VKW D+GG   VK +++EAVEWP K  E F+++G +P
Sbjct: 438  DFENALVEIEPSALREVLVEIPSVKWSDIGGLENVKQEIIEAVEWPLKRPEKFEQMGIKP 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+FGPPG  KTL+A+AVA+E+ +NF++VKGP++  KWVGESEKA+R  F KA+  A
Sbjct: 498  PKGLLLFGPPGTGKTLVAQAVANESNVNFISVKGPQILHKWVGESEKAIRDTFKKAKQVA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P +IFFDE+D +++ R   ++    S++V++QLL E+DGL    +V VIAATNRP+ IDP
Sbjct: 558  PCVIFFDELDSISSTRSGMTEDGRTSEKVLNQLLTEMDGLEPLNDVIVIAATNRPEIIDP 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFDRL+ V   ++  RE IF+IH +  P + DV+I ELA +++G  GADI  +C
Sbjct: 618  ALLRSGRFDRLVLVSQSSKEGRENIFKIHTKNTPLADDVSISELAEMTDGYIGADIESVC 677

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHSNAEADE 1044
            REA + ++ +N +A ++ +++ K AI+ V+P+     +  Y+++  +F+  +     +  
Sbjct: 678  REAVMLSLRDNFEADKVELKYFKEAIKKVRPTVTKEMVDYYEKIKEQFKGGMKKAETSSY 737

Query: 1045 SGY 1047
            +GY
Sbjct: 738  TGY 740



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/263 (42%), Positives = 162/263 (61%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            +K+ED+GG      ++ E +E P K+ E FKR+   PP G++M GP G  KTL+A+AVA+
Sbjct: 189  IKYEDIGGLGSEIQRVREMIELPLKNNELFKRLNIEPPKGVIMHGPSGTGKTLIAKAVAN 248

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  NFL + GPE+  K+ GESE+ +R +F +A  NAPSIIF DEID +A  R  E+   
Sbjct: 249  ESRANFLYIAGPEIMGKYYGESEERIRKIFEEASENAPSIIFIDEIDSIAPKR--ENVTG 306

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV+SQLL  +DGL +R  V VI ATNR D +DPAL RPGRFDR + +G P+   R 
Sbjct: 307  EVERRVVSQLLTMMDGLEERGQVVVIGATNRVDSLDPALRRPGRFDREVEIGVPDTDARH 366

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI +IH R +P + +V +  LA  ++G  GAD+  + +EAA+ ++              +
Sbjct: 367  EILQIHTRGMPITEEVQLDYLAKNTQGFVGADLKALVQEAAMCSLQRFLPHLNLDEEIPQ 426

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E L+   +T +  + A+  ++PS
Sbjct: 427  ETLEEIVVTTEDFENALVEIEPS 449



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/236 (41%), Positives = 149/236 (63%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          L + P KGV++HGP GTGKT +A+  A++S  N
Sbjct: 194 IGGLGSEIQRVREMIELPLKNNELFKRLNIEPPKGVIMHGPSGTGKTLIAKAVANESRAN 253

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              + GPE++ + YGESE+ + ++F+ AS++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 254 FLYIAGPEIMGKYYGESEERIRKIFEEASENAPSIIFIDEIDSIAPKRENVTGEVERRVV 313

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL +MDG+     V+VI ATNR DS++PALRRPGR DRE+EI               V
Sbjct: 314 SQLLTMMDGLEERGQVVVIGATNRVDSLDPALRRPGRFDREVEI--------------GV 359

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  +  + +++YL+  T GFVGADL AL  EAA+  L+R+
Sbjct: 360 PDTDARHEILQIHTRGMPIT-EEVQLDYLAKNTQGFVGADLKALVQEAAMCSLQRF 414



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 126/219 (57%), Gaps = 31/219 (14%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G++P KG+LL GPPGTGKT +A+  A++S VN  +V GP+++ +  GESE+A+ + 
Sbjct: 490 FEQMGIKPPKGLLLFGPPGTGKTLVAQAVANESNVNFISVKGPQILHKWVGESEKAIRDT 549

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q AP V+F DELD+I+  R    E+   S++++  LL  MDG+   + V+VIAAT
Sbjct: 550 FKKAKQVAPCVIFFDELDSISSTRSGMTEDGRTSEKVLNQLLTEMDGLEPLNDVIVIAAT 609

Query: 554 NRPDSIEPALRRPGRLDREIEIDMS------FLFSL-LKNSPAAVPSPAQRLEILHALLS 606
           NRP+ I+PAL R GR DR + +  S       +F +  KN+P A                
Sbjct: 610 NRPEIIDPALLRSGRFDRLVLVSQSSKEGRENIFKIHTKNTPLAD--------------- 654

Query: 607 GMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                  D  +  L+  T G++GAD+ ++C EA ++ LR
Sbjct: 655 -------DVSISELAEMTDGYIGADIESVCREAVMLSLR 686


>gi|288869580|ref|ZP_05975070.2| AAA family ATPase [Methanobrevibacter smithii DSM 2374]
 gi|288861611|gb|EFC93909.1| AAA family ATPase [Methanobrevibacter smithii DSM 2374]
          Length = 740

 Score =  308 bits (790), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 140/272 (51%), Positives = 195/272 (71%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +++PSA+REV+++VP VKW+DVGG  +VK +L EAVEWP KH E F++ G RP
Sbjct: 459  DFKSALKEIQPSALREVLVQVPNVKWDDVGGLDDVKQELKEAVEWPLKHPEKFEKFGVRP 518

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G L++G PG  KTL+A+AVASE+  NF+++KGPEL SKWVGESE+ VR +F KA+  A
Sbjct: 519  PKGTLLYGVPGTGKTLLAKAVASESEANFISIKGPELLSKWVGESEQGVREVFRKAKQTA 578

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A+ R        V+ RV++QLL E+DGL +  +V +IAATNRPD +D 
Sbjct: 579  PTVIFFDEIDSIASTRSANDSDSGVTKRVVNQLLTEMDGLEELEDVAIIAATNRPDILDA 638

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
             L+RPGRFDR + V  PNE  R  IF++H   +P + DV++ +LA  ++G  GADI  +C
Sbjct: 639  GLMRPGRFDRHIKVDLPNEDARLSIFKVHTEGMPLADDVSLEKLAKQTDGYVGADIEAVC 698

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAA+  +  NLDA  +  ++ K A+  V+PS
Sbjct: 699  REAAMLTLRNNLDAENVPYKYFKEALEKVKPS 730



 Score =  229 bits (585), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 115/263 (43%), Positives = 165/263 (62%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG ++   ++ E +E P K  E F ++G  PP G+LM GPPG  KTL+A+AVAS
Sbjct: 210  VSYEDIGGLKDEVKKVREMIEIPLKRPELFDKLGIAPPKGVLMHGPPGTGKTLLAKAVAS 269

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F+A+ GPE+ SK+VG SE+ +R  F +A  NAPSIIF DE+D +A  R +++ G 
Sbjct: 270  ESDAHFIAINGPEIMSKYVGGSEENLREYFEEAEENAPSIIFIDELDAIAPKR-EDTQG- 327

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                R ++QLL  +DGL  R  V VI ATNRPD +D AL RPGRFDR + +G P+  +RE
Sbjct: 328  ETERRTVAQLLTLMDGLKSRGQVVVIGATNRPDSLDQALRRPGRFDREIEIGVPDSEERE 387

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI  IH R +P + DV++ +LA  + G  GAD+  +C+EAA+  +              E
Sbjct: 388  EILEIHTRNMPLAEDVDLHKLASTTHGFVGADLESLCKEAAMRVVRRIIPEIKNDEEIPE 447

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E L    +T    K+A++ +QPS
Sbjct: 448  EVLKKIVVTNDDFKSALKEIQPS 470



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/265 (43%), Positives = 154/265 (58%), Gaps = 26/265 (9%)

Query: 393 PNAQIEF----------QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGL 441
           PN ++E           + V   V+     +GGL  E   ++++I I          LG+
Sbjct: 185 PNTEVELHESPVDVSNIEGVTNLVDVSYEDIGGLKDEVKKVREMIEIPLKRPELFDKLGI 244

Query: 442 RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
            P KGVL+HGPPGTGKT LA+  A +S  +   +NGPE++S+  G SE+ L E F+ A +
Sbjct: 245 APPKGVLMHGPPGTGKTLLAKAVASESDAHFIAINGPEIMSKYVGGSEENLREYFEEAEE 304

Query: 502 SAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           +AP+++FIDELDAIAP R+D   E  +R VA LL LMDG+     V+VI ATNRPDS++ 
Sbjct: 305 NAPSIIFIDELDAIAPKREDTQGETERRTVAQLLTLMDGLKSRGQVVVIGATNRPDSLDQ 364

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
           ALRRPGR DREIEI               VP   +R EIL      M  +  D ++  L+
Sbjct: 365 ALRRPGRFDREIEI--------------GVPDSEEREEILEIHTRNMPLA-EDVDLHKLA 409

Query: 622 MATHGFVGADLAALCNEAALVCLRR 646
             THGFVGADL +LC EAA+  +RR
Sbjct: 410 STTHGFVGADLESLCKEAAMRVVRR 434



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 17/212 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+RP KG LL+G PGTGKT LA+  A +S  N  ++ GPE++S+  GESEQ + EV
Sbjct: 511 FEKFGVRPPKGTLLYGVPGTGKTLLAKAVASESEANFISIKGPELLSKWVGESEQGVREV 570

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q+AP V+F DE+D+IA  R   D    +++R+V  LL  MDG+   + V +IAAT
Sbjct: 571 FRKAKQTAPTVIFFDEIDSIASTRSANDSDSGVTKRVVNQLLTEMDGLEELEDVAIIAAT 630

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD ++  L RPGR DR I++D+              P+   RL I      GM  +  
Sbjct: 631 NRPDILDAGLMRPGRFDRHIKVDL--------------PNEDARLSIFKVHTEGMPLA-D 675

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D  +E L+  T G+VGAD+ A+C EAA++ LR
Sbjct: 676 DVSLEKLAKQTDGYVGADIEAVCREAAMLTLR 707


>gi|402220429|gb|EJU00500.1| transitional endoplasmic reticulum ATPase [Dacryopinax sp. DJM-731
            SS1]
          Length = 551

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 141/282 (50%), Positives = 202/282 (71%), Gaps = 4/282 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D   A    RPSAMREV +E P V+W D+GGQ+ VK +L E VEWP  + + F+R+G  P
Sbjct: 259  DLLNALPGTRPSAMREVFIETPSVRWSDIGGQQSVKEKLKECVEWPLLYPKTFERLGVTP 318

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPEL +K+VGESE+A+R +F KARA A
Sbjct: 319  PKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPELLNKYVGESERAIREIFRKARAAA 378

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSIIFFDEID L ++R    +     + +++ LL E+DG+ + V VT++AATNRPD ID 
Sbjct: 379  PSIIFFDEIDALGSMRTSGDNAGGAHEGMLTTLLNEMDGIQELVGVTIVAATNRPDVIDS 438

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+RPGR DR+LYVGPP+   R EI +I   K+     ++  +LA  + GC+GA+I+ +C
Sbjct: 439  ALMRPGRLDRILYVGPPDLEARMEILKIRTAKMAVEPGIDFHDLAVKTTGCSGAEIAALC 498

Query: 989  REAAISAIEENLDASRITMQHLK----TAIRHVQPSEIHSYK 1026
            +EAA++A++EN+DA+ + ++H +    TA R + P  +  +K
Sbjct: 499  QEAALAAMKENIDAAFVGIRHFRESIDTARRGITPEVVERFK 540



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 151/244 (61%), Gaps = 20/244 (8%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            + +GGL ++ A ++++I +           G++P +GVLLHGPPGTGKT LA   A  +
Sbjct: 10  FASVGGLDRQIAEIRNLIELPLQRPDLFRRFGIKPPRGVLLHGPPGTGKTRLAHAIATST 69

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
             +L  ++GPE+ S  +GE+E AL +VF  A + +P V+ +DELDA+ P R++G  E+ +
Sbjct: 70  RSSLILIHGPELSSAYHGETEAALRQVFQKARKQSPCVIVLDELDALCPKREEGSGEVEK 129

Query: 529 RMVATLLNLMDGVCRTD-----GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSL 583
           R+VATLL LMDG+   D      V+V+  TNR ++I+PALRRPGR DREIEI        
Sbjct: 130 RVVATLLTLMDGMADEDEKEGGRVIVVGTTNRVNTIDPALRRPGRFDREIEI-------- 181

Query: 584 LKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
                  +P    RL ILH LL+ + HSL D  ++ L+  THG+VGADLAAL  +A  + 
Sbjct: 182 ------GIPDATARLAILHVLLARIPHSLDDDTLKPLADRTHGYVGADLAALVRDAGTLA 235

Query: 644 LRRY 647
           + R+
Sbjct: 236 IHRW 239



 Score =  166 bits (419), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 139/243 (57%), Gaps = 8/243 (3%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 836
            VGG      ++   +E P +  + F+R G +PP G+L+ GPPG  KT +A A+A+    +
Sbjct: 13   VGGLDRQIAEIRNLIELPLQRPDLFRRFGIKPPRGVLLHGPPGTGKTRLAHAIATSTRSS 72

Query: 837  FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR 896
             + + GPEL S + GE+E A+R +F KAR  +P +I  DE+D L   R +E  G  V  R
Sbjct: 73   LILIHGPELSSAYHGETEAALRQVFQKARKQSPCVIVLDELDALCPKR-EEGSG-EVEKR 130

Query: 897  VMSQLLVELDGL-----HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V++ LL  +DG+      +   V V+  TNR + IDPAL RPGRFDR + +G P+ T R 
Sbjct: 131  VVATLLTLMDGMADEDEKEGGRVIVVGTTNRVNTIDPALRRPGRFDREIEIGIPDATARL 190

Query: 952  EIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHL 1010
             I  + L +IP S  D  ++ LA  + G  GAD++ + R+A   AI   LDAS++T    
Sbjct: 191  AILHVLLARIPHSLDDDTLKPLADRTHGYVGADLAALVRDAGTLAIHRWLDASKLTAAPK 250

Query: 1011 KTA 1013
             TA
Sbjct: 251  MTA 253



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 127/215 (59%), Gaps = 21/215 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T   LG+ P KGVLL+GPPG  KT  A+  A +SG+N   V GPE++++  GESE+A+ E
Sbjct: 310 TFERLGVTPPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPELLNKYVGESERAIRE 369

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A  +AP+++F DE+DA+   R  G       + M+ TLLN MDG+    GV ++AA
Sbjct: 370 IFRKARAAAPSIIFFDEIDALGSMRTSGDNAGGAHEGMLTTLLNEMDGIQELVGVTIVAA 429

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR           +L   P   P    R+EIL    + M    
Sbjct: 430 TNRPDVIDSALMRPGRLDR-----------ILYVGP---PDLEARMEILKIRTAKMA--- 472

Query: 613 LDSEVEY--LSMATHGFVGADLAALCNEAALVCLR 645
           ++  +++  L++ T G  GA++AALC EAAL  ++
Sbjct: 473 VEPGIDFHDLAVKTTGCSGAEIAALCQEAALAAMK 507


>gi|91773970|ref|YP_566662.1| AAA family ATPase, CDC48 subfamily protein [Methanococcoides burtonii
            DSM 6242]
 gi|91712985|gb|ABE52912.1| VCP-like ATPase, AAA family [Methanococcoides burtonii DSM 6242]
          Length = 738

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/285 (52%), Positives = 197/285 (69%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE A  +V PSAMREV++E+P + WEDVGG  + K +++EAVEWP KH +    +G + 
Sbjct: 435  DFEDALKEVEPSAMREVLVEIPSITWEDVGGLSDAKQEIIEAVEWPLKHPDRIIEMGIKA 494

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPG  KTL+A+AVA+EA  NF+++KGP++ SK+VGESEKAVR  F KAR  +
Sbjct: 495  PKGILLYGPPGTGKTLIAQAVANEANANFISIKGPQMLSKFVGESEKAVRDTFKKARQVS 554

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P IIFFDEID +A  R  +S+    S +V++QLL ELDGL     V VIAATNRPD IDP
Sbjct: 555  PCIIFFDEIDSIATTRIADSETGRSSQQVVNQLLTELDGLEPLKEVVVIAATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ VG      RE IF IH R++P  S+V+I+ LA ++EG  GADI  +C
Sbjct: 615  ALMRSGRFDRLVLVGNSTIQGRESIFNIHTREMPLDSEVSIQSLAAMTEGYVGADIEAVC 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            REAA+ A+ E+ DA  +  +H   AI  V+P+      E  +K Q
Sbjct: 675  REAAMLALREDFDAESVKERHFLAAIEKVKPTITEDMAEFYSKIQ 719



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 114/264 (43%), Positives = 168/264 (63%), Gaps = 17/264 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG  +   ++ E +E P KH E F+R+   PP G++++GPPG  KTL+A+AVA+
Sbjct: 185  ITYEDIGGLGDEIQRVREMIELPLKHHEIFQRLNVEPPKGVILYGPPGTGKTLIAKAVAN 244

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  NFL V GPE+  ++ GESE+ +R +F +A  NAPSIIF DEID +A  R  E+   
Sbjct: 245  ESRANFLYVAGPEIMGRFYGESEERLRKIFEEAAENAPSIIFIDEIDSIAPKR--ENVTG 302

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DG+ +R  + VIAATNR D IDPAL RPGRFDR + +G P+  DR 
Sbjct: 303  EVERRVVAQLLTLMDGMEERGQIVVIAATNRLDSIDPALRRPGRFDREIEIGVPDSDDRL 362

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDASRI- 1005
            E+ +IH R +P + DV++  LA  ++G  GAD+  + +EA++ A+     E NLD   I 
Sbjct: 363  EVLQIHSRGMPLAEDVDLEHLATYTQGFVGADLLSLVQEASMRALRRILPEINLDEEEIS 422

Query: 1006 ---------TMQHLKTAIRHVQPS 1020
                     T +  + A++ V+PS
Sbjct: 423  QEVLEKLVVTAEDFEDALKEVEPS 446



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/278 (41%), Positives = 166/278 (59%), Gaps = 25/278 (8%)

Query: 379 PLNAVSKSLREGTL---PNAQIEFQNVQATVEQDIS------KLGGLSKEYAILKDII-I 428
           PL A+     EG L    N +IE +       +D +       +GGL  E   ++++I +
Sbjct: 147 PLVAIESEPEEGILIVSENTEIELRQKPVEGYEDTATGITYEDIGGLGDEIQRVREMIEL 206

Query: 429 SSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGES 488
                     L + P KGV+L+GPPGTGKT +A+  A++S  N   V GPE++ + YGES
Sbjct: 207 PLKHHEIFQRLNVEPPKGVILYGPPGTGKTLIAKAVANESRANFLYVAGPEIMGRFYGES 266

Query: 489 EQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVL 548
           E+ L ++F+ A+++AP+++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     ++
Sbjct: 267 EERLRKIFEEAAENAPSIIFIDEIDSIAPKRENVTGEVERRVVAQLLTLMDGMEERGQIV 326

Query: 549 VIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
           VIAATNR DSI+PALRRPGR DREIEI               VP    RLE+L     GM
Sbjct: 327 VIAATNRLDSIDPALRRPGRFDREIEI--------------GVPDSDDRLEVLQIHSRGM 372

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             +  D ++E+L+  T GFVGADL +L  EA++  LRR
Sbjct: 373 PLA-EDVDLEHLATYTQGFVGADLLSLVQEASMRALRR 409



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 21/211 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++  KG+LL+GPPGTGKT +A+  A+++  N  ++ GP+++S+  GESE+A+ + F  
Sbjct: 490 MGIKAPKGILLYGPPGTGKTLIAQAVANEANANFISIKGPQMLSKFVGESEKAVRDTFKK 549

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A Q +P ++F DE+D+IA  R    E    SQ++V  LL  +DG+     V+VIAATNRP
Sbjct: 550 ARQVSPCIIFFDEIDSIATTRIADSETGRSSQQVVNQLLTELDGLEPLKEVVVIAATNRP 609

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+PAL R GR DR           L+ NS     +   R  I +     M    LDSE
Sbjct: 610 DMIDPALMRSGRFDR---------LVLVGNS-----TIQGRESIFNIHTREMP---LDSE 652

Query: 617 VEYLSMA--THGFVGADLAALCNEAALVCLR 645
           V   S+A  T G+VGAD+ A+C EAA++ LR
Sbjct: 653 VSIQSLAAMTEGYVGADIEAVCREAAMLALR 683


>gi|357614717|gb|EHJ69230.1| hypothetical protein KGM_12902 [Danaus plexippus]
          Length = 763

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 151/289 (52%), Positives = 207/289 (71%), Gaps = 6/289 (2%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            +E  D   A   VRPSAMRE+++E+P V+W D+GGQ  +K +L +AVEWP KH E+F R+
Sbjct: 438  IEKEDLIGALTVVRPSAMRELLIEIPNVRWSDIGGQDGLKLKLRQAVEWPLKHPESFLRL 497

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G RPP G+L++GPPGCSKT++A+A+A+E+GLNFL++KGPELFSKWVGESE+AVR LF KA
Sbjct: 498  GIRPPAGVLLYGPPGCSKTMIAKALATESGLNFLSIKGPELFSKWVGESERAVRDLFTKA 557

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R  APSIIFFDE+D +   RG       V +RV++QLL ELDG+    +VT++AATNRPD
Sbjct: 558  RQVAPSIIFFDEMDAIGGERGAGE--AGVHERVLAQLLTELDGVVPLNSVTILAATNRPD 615

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
            ++D ALLRPGR DRL+YV  P+   R +I  + L K+  S DVN   LA  SEG +GA++
Sbjct: 616  RMDRALLRPGRIDRLIYVPLPDFETRLQIIELKLSKMSTSDDVNPHVLAIKSEGFSGAEL 675

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQP----SEIHSYKELS 1029
              +C EAA+ A+E++L+   +TM+H +   +  +P    S +  Y+E S
Sbjct: 676  HALCHEAAMRALEKDLNCQEVTMEHFEHVFKDFKPRTPDSLLKIYEEFS 724



 Score =  157 bits (398), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 127/208 (61%), Gaps = 15/208 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+RP  GVLL+GPPG  KT +A+  A +SG+N  ++ GPE+ S+  GESE+A+ ++F  
Sbjct: 497 LGIRPPAGVLLYGPPGCSKTMIAKALATESGLNFLSIKGPELFSKWVGESERAVRDLFTK 556

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A Q AP+++F DE+DAI   R  G   + +R++A LL  +DGV   + V ++AATNRPD 
Sbjct: 557 ARQVAPSIIFFDEMDAIGGERGAGEAGVHERVLAQLLTELDGVVPLNSVTILAATNRPDR 616

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           ++ AL RPGR+DR I + +              P    RL+I+   LS M  S  D    
Sbjct: 617 MDRALLRPGRIDRLIYVPL--------------PDFETRLQIIELKLSKMSTS-DDVNPH 661

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRR 646
            L++ + GF GA+L ALC+EAA+  L +
Sbjct: 662 VLAIKSEGFSGAELHALCHEAAMRALEK 689



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 143/248 (57%), Gaps = 20/248 (8%)

Query: 413 LGGLSKEYAILKDI--IISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           LGG++    I+ DI  +I+ S  +T  +   +PTKG+LL+G  G+GKT++ +        
Sbjct: 214 LGGVAD---IVDDIKSLINISFDTTGFAANFQPTKGLLLYGHSGSGKTAICKYLIDSLDC 270

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM 530
               VNGP++ S+ +GE+E  + ++F  A  + P+++ +DE++ I P       E  +R+
Sbjct: 271 FHIEVNGPKIFSKYFGETEGTMKDLFAKAIANEPSIILVDEIETICPRHSSASTEQERRV 330

Query: 531 VATLLNLMDGVCR-TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
            +  ++L+D + + +  V V+A T +P++I+P LRR GRLD+E+E+              
Sbjct: 331 TSAFVSLLDNLHQDSSRVFVLATTRKPEAIDPMLRRFGRLDKEVEV-------------- 376

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
            VP   +R +IL+ALL  + + +   ++E +S   HG+V ADL  LC++A++ CL+R S+
Sbjct: 377 PVPDRKRRADILYALLKNLPNKVSSQDMEAISDLAHGYVAADLVNLCSQASMKCLKRMSE 436

Query: 650 IQTSSDVL 657
                D++
Sbjct: 437 AIEKEDLI 444



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 6/216 (2%)

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
            +P  G+L++G  G  KT + + +        + V GP++FSK+ GE+E  ++ LFAKA A
Sbjct: 242  QPTKGLLLYGHSGSGKTAICKYLIDSLDCFHIEVNGPKIFSKYFGETEGTMKDLFAKAIA 301

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN-VTVIAATNRPDK 925
            N PSII  DEI+ +       S       RV S  +  LD LHQ  + V V+A T +P+ 
Sbjct: 302  NEPSIILVDEIETICPRHSSAS--TEQERRVTSAFVSLLDNLHQDSSRVFVLATTRKPEA 359

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADI 984
            IDP L R GR D+ + V  P+   R +I    L+ +P   S  ++  ++ L+ G   AD+
Sbjct: 360  IDPMLRRFGRLDKEVEVPVPDRKRRADILYALLKNLPNKVSSQDMEAISDLAHGYVAADL 419

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
              +C +A++  ++   +A  I  + L  A+  V+PS
Sbjct: 420  VNLCSQASMKCLKRMSEA--IEKEDLIGALTVVRPS 453


>gi|227827953|ref|YP_002829733.1| ATPase AAA [Sulfolobus islandicus M.14.25]
 gi|229585220|ref|YP_002843722.1| AAA ATPase [Sulfolobus islandicus M.16.27]
 gi|238620179|ref|YP_002915005.1| ATPase AAA [Sulfolobus islandicus M.16.4]
 gi|385773657|ref|YP_005646223.1| AAA ATPase [Sulfolobus islandicus HVE10/4]
 gi|385776292|ref|YP_005648860.1| AAA ATPase [Sulfolobus islandicus REY15A]
 gi|227459749|gb|ACP38435.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus M.14.25]
 gi|228020270|gb|ACP55677.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus M.16.27]
 gi|238381249|gb|ACR42337.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus M.16.4]
 gi|323475040|gb|ADX85646.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus REY15A]
 gi|323477771|gb|ADX83009.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus HVE10/4]
          Length = 759

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/257 (56%), Positives = 188/257 (73%), Gaps = 1/257 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   ++P+ +REV +EVPKVKWED+GG  E K QL EAVEWP K  E F+
Sbjct: 434 LKVTMQDFIDAMKFIQPTLLREVYVEVPKVKWEDIGGLEEAKQQLREAVEWPLKFPEMFE 493

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           ++G RPP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F 
Sbjct: 494 KLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREIFR 553

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           +AR  AP +IFFDEID +A +RG   D   V++R+++QLL E+DG+     V VIAATNR
Sbjct: 554 RARQTAPCVIFFDEIDSIAPMRGFTHDS-GVTERIVNQLLSEMDGIQSLNRVVVIAATNR 612

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +DPALLRPGRFDRL+YV PP+E  R EI +I+ + +P  S VN+ ELA   EG TGA
Sbjct: 613 PDILDPALLRPGRFDRLIYVPPPDEKARIEILKIYTKTLPIDSSVNLEELAKKLEGYTGA 672

Query: 983 DISLICREAAISAIEEN 999
           DI  + RE  +  + + 
Sbjct: 673 DIEALARETTMKVLRQK 689



 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 118/269 (43%), Positives = 174/269 (64%), Gaps = 19/269 (7%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VPKV WED+G   +VK ++ E VE P +H E F+ +G  PP G+L++GPPG  KTL+ARA
Sbjct: 185  VPKVTWEDIGDLEDVKEKIREIVELPMRHPEVFQHLGIEPPKGVLLYGPPGVGKTLLARA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+E G  F ++ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E 
Sbjct: 245  LANEIGAYFTSINGPEIMSKFYGESEQRLREIFEEAEKNAPAIIFIDEIDAIAPKR-EEV 303

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DG+  R  V VI ATNRPD +DPAL RPGRFDR + + PP+  
Sbjct: 304  TG-EVEKRVVAQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPGRFDREIEIRPPDAK 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI--- 1005
             R+EI ++H R +P + DV++ +++  + G TGAD++ + REAA++A+   ++  +I   
Sbjct: 363  ARKEILQVHTRNMPLAEDVDLDKISEQTHGYTGADLAALAREAAMNALRRFINERKINLE 422

Query: 1006 --------------TMQHLKTAIRHVQPS 1020
                          TMQ    A++ +QP+
Sbjct: 423  QEQIPVDVLKELKVTMQDFIDAMKFIQPT 451



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/213 (49%), Positives = 140/213 (65%), Gaps = 15/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               LG+ P KGVLL+GPPG GKT LAR  A++ G    ++NGPE++S+ YGESEQ L E
Sbjct: 216 VFQHLGIEPPKGVLLYGPPGVGKTLLARALANEIGAYFTSINGPEIMSKFYGESEQRLRE 275

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATN
Sbjct: 276 IFEEAEKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGIKGRGKVIVIGATN 335

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD+++PALRRPGR DREIEI            P   P    R EIL      M  +  D
Sbjct: 336 RPDAVDPALRRPGRFDREIEI-----------RP---PDAKARKEILQVHTRNMPLA-ED 380

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            +++ +S  THG+ GADLAAL  EAA+  LRR+
Sbjct: 381 VDLDKISEQTHGYTGADLAALAREAAMNALRRF 413



 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 130/218 (59%), Gaps = 28/218 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+RP KG+LL GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ E+
Sbjct: 492 FEKLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREI 551

Query: 496 FDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q+AP V+F DE+D+IAP R    D G  +++R+V  LL+ MDG+   + V+VIAA
Sbjct: 552 FRRARQTAPCVIFFDEIDSIAPMRGFTHDSG--VTERIVNQLLSEMDGIQSLNRVVVIAA 609

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD ++PAL RPGR DR I                 VP P +  R+EIL      +  
Sbjct: 610 TNRPDILDPALLRPGRFDRLI----------------YVPPPDEKARIEILKIYTKTLP- 652

Query: 611 SLLDSEV--EYLSMATHGFVGADLAALCNEAALVCLRR 646
             +DS V  E L+    G+ GAD+ AL  E  +  LR+
Sbjct: 653 --IDSSVNLEELAKKLEGYTGADIEALARETTMKVLRQ 688


>gi|229581753|ref|YP_002840152.1| AAA ATPase [Sulfolobus islandicus Y.N.15.51]
 gi|228012469|gb|ACP48230.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus
           Y.N.15.51]
          Length = 759

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/257 (56%), Positives = 188/257 (73%), Gaps = 1/257 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   ++P+ +REV +EVPKVKWED+GG  E K QL EAVEWP K  E F+
Sbjct: 434 LKVTMQDFIDAMKFIQPTLLREVYVEVPKVKWEDIGGLEEAKQQLREAVEWPLKFPEMFE 493

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           ++G RPP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F 
Sbjct: 494 KLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREIFR 553

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           +AR  AP +IFFDEID +A +RG   D   V++R+++QLL E+DG+     V VIAATNR
Sbjct: 554 RARQTAPCVIFFDEIDSIAPMRGFTHDS-GVTERIVNQLLSEMDGIQSLNRVVVIAATNR 612

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +DPALLRPGRFDRL+YV PP+E  R EI +I+ + +P  S VN+ ELA   EG TGA
Sbjct: 613 PDILDPALLRPGRFDRLIYVPPPDEKARIEILKIYTKTLPIDSSVNLEELAKKLEGYTGA 672

Query: 983 DISLICREAAISAIEEN 999
           DI  + RE  +  + + 
Sbjct: 673 DIEALARETTMKVLRQK 689



 Score =  246 bits (627), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 121/283 (42%), Positives = 182/283 (64%), Gaps = 20/283 (7%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            +++R   ++E  + VPKV WED+G   +VK ++ E VE P +H E F+ +G  PP G+L+
Sbjct: 172  LEIRQEPVKETAV-VPKVTWEDIGDLEDVKEKIREIVELPMRHPEVFQHLGIEPPKGVLL 230

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+ARA+A+E G  F ++ GPE+ SK+ GESE+ +R +F +A  NAP+IIF 
Sbjct: 231  YGPPGVGKTLLARALANEIGAYFTSINGPEIMSKFYGESEQRLREIFEEAEKNAPAIIFI 290

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV+SQLL  +DG+  R  V VI ATNRPD +DPAL RPG
Sbjct: 291  DEIDAIAPKR-EEVTG-EVEKRVVSQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPG 348

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + + PP+   R+EI ++H R +P + DV++ +++  + G TGAD++ + REAA++
Sbjct: 349  RFDREIEIRPPDAKARKEILQVHTRNMPLAEDVDLDKISEQTHGYTGADLAALAREAAMN 408

Query: 995  AIEENLDASRI-----------------TMQHLKTAIRHVQPS 1020
            A+   ++  +I                 TMQ    A++ +QP+
Sbjct: 409  ALRRFINERKINLEQEQIPVDVLKELKVTMQDFIDAMKFIQPT 451



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 105/213 (49%), Positives = 140/213 (65%), Gaps = 15/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               LG+ P KGVLL+GPPG GKT LAR  A++ G    ++NGPE++S+ YGESEQ L E
Sbjct: 216 VFQHLGIEPPKGVLLYGPPGVGKTLLARALANEIGAYFTSINGPEIMSKFYGESEQRLRE 275

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F+ A ++APA++FIDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VI ATN
Sbjct: 276 IFEEAEKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVSQLLTLMDGIKGRGKVIVIGATN 335

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD+++PALRRPGR DREIEI            P   P    R EIL      M  +  D
Sbjct: 336 RPDAVDPALRRPGRFDREIEI-----------RP---PDAKARKEILQVHTRNMPLA-ED 380

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            +++ +S  THG+ GADLAAL  EAA+  LRR+
Sbjct: 381 VDLDKISEQTHGYTGADLAALAREAAMNALRRF 413



 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/273 (39%), Positives = 150/273 (54%), Gaps = 33/273 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+RP KG+LL GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ E+
Sbjct: 492 FEKLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREI 551

Query: 496 FDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q+AP V+F DE+D+IAP R    D G  +++R+V  LL+ MDG+   + V+VIAA
Sbjct: 552 FRRARQTAPCVIFFDEIDSIAPMRGFTHDSG--VTERIVNQLLSEMDGIQSLNRVVVIAA 609

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD ++PAL RPGR DR I                 VP P +  R+EIL      +  
Sbjct: 610 TNRPDILDPALLRPGRFDRLI----------------YVPPPDEKARIEILKIYTKTLP- 652

Query: 611 SLLDSEV--EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEG 668
             +DS V  E L+    G+ GAD+ AL  E  +  LR     Q   + L+      + + 
Sbjct: 653 --IDSSVNLEELAKKLEGYTGADIEALARETTMKVLR-----QKYYECLNKAKKECKDQE 705

Query: 669 HSDTMLQDSDCSRNITESSRDCLDSASPCTSDL 701
            SD  +++   +  I  + +D LD+    T  L
Sbjct: 706 CSDKTIKNCMSNLEIKITMQDFLDTMKVVTPSL 738


>gi|443918946|gb|ELU39265.1| ribosome biogenesis ATPase RIX7 [Rhizoctonia solani AG-1 IA]
          Length = 703

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 212/593 (35%), Positives = 296/593 (49%), Gaps = 100/593 (16%)

Query: 440  GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
            G++P +GVLLHGPPG GKT LA   A + GV   +V+ P VVS   GESE+ L + FD A
Sbjct: 105  GVQPPRGVLLHGPPGCGKTMLANAIAGELGVPFISVSAPSVVSGMSGESEKTLRDTFDEA 164

Query: 500  SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
              +                                            V+VI ATNRPDS+
Sbjct: 165  KNT----------------------------------------DHKPVIVIGATNRPDSL 184

Query: 560  EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY 619
            +PALRR GR D EI +               VP  A R +IL  LL  +   L     EY
Sbjct: 185  DPALRRAGRFDHEISM--------------GVPDEAGRQQILKTLLDKLR--LAGPTEEY 228

Query: 620  ---LSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
               L+ AT G+VGADLA+L + A ++ ++R +  + + + +      +   +G SDT   
Sbjct: 229  TAALARATPGYVGADLASLTSAAGVIAVKRIFKGLLSGAFITGDEPAIAPPQGASDT--S 286

Query: 676  DSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMF 735
             S    N+ E              D+P   +    P         D        +S    
Sbjct: 287  QSTLPNNLLEKP------------DVPVDDIEMIPPDEQAAPSAYDQEQTTTPVTSALTT 334

Query: 736  MS-------EKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLM 788
            +        E+   L + L DF  A    +PSA RE     P V W D+G  + ++ +L 
Sbjct: 335  LLRSTTLTPEQLSKLTISLPDFLAALEITQPSATREGFTTRPDVSWADIGALKGIREELE 394

Query: 789  EAVEWPQKHQEAFKRIGT-RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFS 847
             AV WP +  E F  +G      G+L++GPPGC KTL+A+AVA E+G NF++VKGPEL +
Sbjct: 395  MAVVWPIRRPELFSDLGVGTGGRGVLLWGPPGCGKTLLAKAVAGESGANFISVKGPELLN 454

Query: 848  KWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELD 906
            K+VGESE+AVR +F +ARA+AP ++FFDE+D L   R    D +S S  RV++ LL ELD
Sbjct: 455  KYVGESERAVRQVFTRARASAPCVVFFDELDALVPRR---DDSLSESSARVVNTLLTELD 511

Query: 907  GLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKI----- 961
            GL  R  V V+ ATNRPD +DPA+ RPGR D+LLYV  P+  +R EI R  +R +     
Sbjct: 512  GLTARGAVYVVGATNRPDMLDPAMCRPGRLDKLLYVDLPSPAERGEIMRTLIRGVRLGSA 571

Query: 962  PCSSDVNIRELACLS---------EGCTGADISLICREAAISAIEENLDASRI 1005
            P  S  + R L   +         +G +GAD++ + REAA+ A+   L + +I
Sbjct: 572  PTVSLESERALIVSTIAQLAIDRCDGYSGADLAALVREAAVGALRSVLLSGQI 624



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/272 (40%), Positives = 151/272 (55%), Gaps = 31/272 (11%)

Query: 389 EGTLPNAQIEFQNVQATVE-QDISKLGGLSKEYAILKDIIISSSVKSTLSSLGL-RPTKG 446
           E T P+A  E    +  V   DI  L G+ +E  +   ++         S LG+    +G
Sbjct: 361 EITQPSATREGFTTRPDVSWADIGALKGIREELEMA--VVWPIRRPELFSDLGVGTGGRG 418

Query: 447 VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 506
           VLL GPPG GKT LA+  A +SG N  +V GPE++++  GESE+A+ +VF  A  SAP V
Sbjct: 419 VLLWGPPGCGKTLLAKAVAGESGANFISVKGPELLNKYVGESERAVRQVFTRARASAPCV 478

Query: 507 VFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRP 566
           VF DELDA+ P R D   E S R+V TLL  +DG+     V V+ ATNRPD ++PA+ RP
Sbjct: 479 VFFDELDALVPRRDDSLSESSARVVNTLLTELDGLTARGAVYVVGATNRPDMLDPAMCRP 538

Query: 567 GRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM------------EHSLLD 614
           GRLD+ + +D+              PSPA+R EI+  L+ G+            E +L+ 
Sbjct: 539 GRLDKLLYVDL--------------PSPAERGEIMRTLIRGVRLGSAPTVSLESERALIV 584

Query: 615 SEVEYLSM-ATHGFVGADLAALCNEAALVCLR 645
           S +  L++    G+ GADLAAL  EAA+  LR
Sbjct: 585 STIAQLAIDRCDGYSGADLAALVREAAVGALR 616



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 112/232 (48%), Gaps = 44/232 (18%)

Query: 768 EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
           E P  +  D+GG  +   +L+E V  P  H E +   G +PP G+L+ GPPGC KT++A 
Sbjct: 68  EPPTTRLSDLGGVTDAVEKLLELVALPVCHPEVYLHTGVQPPRGVLLHGPPGCGKTMLAN 127

Query: 828 AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
           A+A E G+ F++V  P + S   GESEK +R  F +A                     K 
Sbjct: 128 AIAGELGVPFISVSAPSVVSGMSGESEKTLRDTFDEA---------------------KN 166

Query: 888 SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
           +D                   H+   V VI ATNRPD +DPAL R GRFD  + +G P+E
Sbjct: 167 TD-------------------HK--PVIVIGATNRPDSLDPALRRAGRFDHEISMGVPDE 205

Query: 948 TDREEIFRIHLRKIPCSSDVN--IRELACLSEGCTGADISLICREAAISAIE 997
             R++I +  L K+  +         LA  + G  GAD++ +   A + A++
Sbjct: 206 AGRQQILKTLLDKLRLAGPTEEYTAALARATPGYVGADLASLTSAAGVIAVK 257


>gi|227830675|ref|YP_002832455.1| AAA ATPase [Sulfolobus islandicus L.S.2.15]
 gi|229579582|ref|YP_002837981.1| AAA ATPase [Sulfolobus islandicus Y.G.57.14]
 gi|284998202|ref|YP_003419969.1| ATPase AAA [Sulfolobus islandicus L.D.8.5]
 gi|227457123|gb|ACP35810.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus L.S.2.15]
 gi|228010297|gb|ACP46059.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus
           Y.G.57.14]
 gi|284446097|gb|ADB87599.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus L.D.8.5]
          Length = 759

 Score =  308 bits (789), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/257 (56%), Positives = 188/257 (73%), Gaps = 1/257 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   ++P+ +REV +EVPKVKWED+GG  E K QL EAVEWP K  E F+
Sbjct: 434 LKVTMQDFIDAMKFIQPTLLREVYVEVPKVKWEDIGGLEEAKQQLREAVEWPLKFPEMFE 493

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           ++G RPP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F 
Sbjct: 494 KLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREIFR 553

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           +AR  AP +IFFDEID +A +RG   D   V++R+++QLL E+DG+     V VIAATNR
Sbjct: 554 RARQTAPCVIFFDEIDSIAPMRGFTHDS-GVTERIVNQLLSEMDGIQSLNRVVVIAATNR 612

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +DPALLRPGRFDRL+YV PP+E  R EI +I+ + +P  S VN+ ELA   EG TGA
Sbjct: 613 PDILDPALLRPGRFDRLIYVPPPDEKARIEILKIYTKTLPIDSSVNLEELAKKLEGYTGA 672

Query: 983 DISLICREAAISAIEEN 999
           DI  + RE  +  + + 
Sbjct: 673 DIEALARETTMKVLRQK 689



 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 118/269 (43%), Positives = 174/269 (64%), Gaps = 19/269 (7%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VPKV WED+G   +VK ++ E VE P +H E F+ +G  PP G+L++GPPG  KTL+ARA
Sbjct: 185  VPKVTWEDIGDLEDVKEKIREIVELPMRHPEVFQHLGIEPPKGVLLYGPPGVGKTLLARA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+E G  F ++ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E 
Sbjct: 245  LANEIGAYFTSINGPEIMSKFYGESEQRLREIFEEAEKNAPAIIFIDEIDAIAPKR-EEV 303

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DG+  R  V VI ATNRPD +DPAL RPGRFDR + + PP+  
Sbjct: 304  TG-EVEKRVVAQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPGRFDREIEIRPPDAK 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI--- 1005
             R+EI ++H R +P + DV++ +++  + G TGAD++ + REAA++A+   ++  +I   
Sbjct: 363  ARKEILQVHTRNMPLAEDVDLDKISEQTHGYTGADLAALAREAAMNALRRFINERKINLE 422

Query: 1006 --------------TMQHLKTAIRHVQPS 1020
                          TMQ    A++ +QP+
Sbjct: 423  QEQIPVDVLKELKVTMQDFIDAMKFIQPT 451



 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 106/213 (49%), Positives = 140/213 (65%), Gaps = 15/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               LG+ P KGVLL+GPPG GKT LAR  A++ G    ++NGPE++S+ YGESEQ L E
Sbjct: 216 VFQHLGIEPPKGVLLYGPPGVGKTLLARALANEIGAYFTSINGPEIMSKFYGESEQRLRE 275

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATN
Sbjct: 276 IFEEAEKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGIKGRGKVIVIGATN 335

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD+++PALRRPGR DREIEI            P   P    R EIL      M  +  D
Sbjct: 336 RPDAVDPALRRPGRFDREIEI-----------RP---PDAKARKEILQVHTRNMPLA-ED 380

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            +++ +S  THG+ GADLAAL  EAA+  LRR+
Sbjct: 381 VDLDKISEQTHGYTGADLAALAREAAMNALRRF 413



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/273 (39%), Positives = 150/273 (54%), Gaps = 33/273 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+RP KG+LL GPPGTGKT LA+  A +SG N   V GPE++S+  GESE+A+ E+
Sbjct: 492 FEKLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREI 551

Query: 496 FDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q+AP V+F DE+D+IAP R    D G  +++R+V  LL+ MDG+   + V+VIAA
Sbjct: 552 FRRARQTAPCVIFFDEIDSIAPMRGFTHDSG--VTERIVNQLLSEMDGIQSLNRVVVIAA 609

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNRPD ++PAL RPGR DR I                 VP P +  R+EIL      +  
Sbjct: 610 TNRPDILDPALLRPGRFDRLI----------------YVPPPDEKARIEILKIYTKTLP- 652

Query: 611 SLLDSEV--EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEG 668
             +DS V  E L+    G+ GAD+ AL  E  +  LR     Q   + L+      + + 
Sbjct: 653 --IDSSVNLEELAKKLEGYTGADIEALARETTMKVLR-----QKYYECLNKAKKECKDQE 705

Query: 669 HSDTMLQDSDCSRNITESSRDCLDSASPCTSDL 701
            SD  +++   +  I  + +D LD+    T  L
Sbjct: 706 CSDKTIKNCMSNLEIKITMQDFLDTMKVVTPSL 738


>gi|341583068|ref|YP_004763560.1| cell division protein CDC48 [Thermococcus sp. 4557]
 gi|340810726|gb|AEK73883.1| cell division protein CDC48 [Thermococcus sp. 4557]
          Length = 795

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 154/311 (49%), Positives = 208/311 (66%), Gaps = 21/311 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV+LEVP V WED+GG   VK +L EAVEWP K+ EAF 
Sbjct: 484  LKVTRRDFYEALKMVEPSALREVLLEVPNVHWEDIGGLENVKEELREAVEWPLKYPEAFM 543

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A+KGPE+ SKWVGESEK +R +F 
Sbjct: 544  GLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNIREIFR 603

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A  RG  +D   V+DR+++QLL E+DG+ +   V VIAATNR
Sbjct: 604  KARQAAPTVIFIDEIDAIAPRRG--TDVNHVTDRLINQLLTEMDGIQENSGVVVIAATNR 661

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+ V  P+E  R EIF++H R +P + DV + ELA  +EG TGA
Sbjct: 662  PDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRNVPLAEDVRLEELAKRTEGYTGA 721

Query: 983  DISLICREAAISAIEENLDAS---------------RITMQHLKTAIRHVQPS----EIH 1023
            DI  + REAA+ A+   L                  ++TM+  + A+  + PS     + 
Sbjct: 722  DIEAVVREAAMLAMRRALQDGIIRPGMKADEIRQRVKVTMKDFEEAMEKIGPSVGEETME 781

Query: 1024 SYKELSAKFQR 1034
             Y+++  +F++
Sbjct: 782  YYRKIQEQFKQ 792



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 103/195 (52%), Positives = 140/195 (71%), Gaps = 2/195 (1%)

Query: 772 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
           V +ED+GG ++V  ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179 VTYEDIGGLKDVIQKVREMIELPLKHPEIFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
           EA  +F+A+ GPE+ SK+ GESE+ +R +F +A  NAP+IIF DEID +A  R +E+ G 
Sbjct: 239 EANAHFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKR-EETHG- 296

Query: 892 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            V  RV+SQLL  +DGL  R  V VIAATNRPD IDPAL RPGRFDR L VG P++  R+
Sbjct: 297 EVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGRFDRELEVGVPDKQGRK 356

Query: 952 EIFRIHLRKIPCSSD 966
           EI +IH R +P   +
Sbjct: 357 EILQIHTRGMPIEPE 371



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/212 (45%), Positives = 131/212 (61%), Gaps = 25/212 (11%)

Query: 408 QDISKLGGLSKEY---AILKDII------ISSSVK--STLSSLGLRPTKGVLLHGPPGTG 456
           +++SK   L   Y     LKD+I      I   +K       LG+ P KGVLL+GPPGTG
Sbjct: 169 KEVSKTAALGVTYEDIGGLKDVIQKVREMIELPLKHPEIFEKLGIEPPKGVLLYGPPGTG 228

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT LA+  A+++  +   +NGPE++S+ YGESE+ L EVF  A ++APA++FIDE+DAIA
Sbjct: 229 KTLLAKAVANEANAHFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIA 288

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+I+PALRRPGR DRE+E+ 
Sbjct: 289 PKREETHGEVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGRFDRELEV- 347

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
                         VP    R EIL     GM
Sbjct: 348 -------------GVPDKQGRKEILQIHTRGM 366



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 129/211 (61%), Gaps = 19/211 (9%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
            LG+ P KG+LL+GPPGTGKT LA+  A++S  N   + GPEV+S+  GESE+ + E+F 
Sbjct: 544 GLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIKGPEVLSKWVGESEKNIREIFR 603

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            A Q+AP V+FIDE+DAIAP R      ++ R++  LL  MDG+    GV+VIAATNRPD
Sbjct: 604 KARQAAPTVIFIDEIDAIAPRRGTDVNHVTDRLINQLLTEMDGIQENSGVVVIAATNRPD 663

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDS 615
            I+PAL RPGR DR I                 VP+P +  RLEI       +  +  D 
Sbjct: 664 IIDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRNVPLA-EDV 706

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            +E L+  T G+ GAD+ A+  EAA++ +RR
Sbjct: 707 RLEELAKRTEGYTGADIEAVVREAAMLAMRR 737


>gi|91773629|ref|YP_566321.1| AAA family ATPase, CDC48 subfamily protein [Methanococcoides burtonii
            DSM 6242]
 gi|91712644|gb|ABE52571.1| CDC48, AAA family ATPase [Methanococcoides burtonii DSM 6242]
          Length = 736

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 155/320 (48%), Positives = 212/320 (66%), Gaps = 23/320 (7%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF +A   + PSA+REV +E+P V+WED+GG  +VK +L+EAVEWP K+ E F 
Sbjct: 416  LEVTETDFIEAHRNIEPSALREVFVEIPHVRWEDIGGLNKVKQELIEAVEWPLKYPEMFT 475

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             + T PP GIL+FGPPG  KTL+A+AVA+E+  NF+++KGPEL SK+VGESEKAVR  F 
Sbjct: 476  ALNTTPPRGILLFGPPGTGKTLLAKAVANESEANFISIKGPELLSKYVGESEKAVRETFR 535

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+  AP+++FFDE+D +   RG  SD    ++RV+SQ+L E+DG+ +  ++ ++AATNR
Sbjct: 536  KAKQAAPTVVFFDELDSMVPKRGMGSDQ-QATERVVSQILTEIDGIEELKDIVIVAATNR 594

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+YV PP++ +R +I  IHL   P + DV + ELA L+EG  GA
Sbjct: 595  PDIIDPALLRPGRFDRLIYVRPPDKEERAKILDIHLSGKPIAEDVKLEELAELTEGYVGA 654

Query: 983  DISLICREAAI-------------SAIEENLDASRITMQHLKTAIRHVQPS----EIHSY 1025
            DI  ICREAA+               + E +    I   H  TAI+ V+ S    E+  Y
Sbjct: 655  DIEAICREAAMMTLREIIRPGMTKDEVYETVKNVVIQRSHFSTAIKRVRASTSLDEMKRY 714

Query: 1026 KELSAKFQRLVHSNAEADES 1045
             E +  F     SN +ADE+
Sbjct: 715  DETARMF-----SNPDADEN 729



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/237 (46%), Positives = 151/237 (63%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLL+GPPGTGKT +A+  A +S  N
Sbjct: 178 IGGLKRELGLMREMIELPLRHPELFDKLGVDPPKGVLLYGPPGTGKTMIAKAVASESEAN 237

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              ++GPE++S+ YGESEQ L E+F+ A +  P ++FIDELD+IAP R D   E+ +R+V
Sbjct: 238 FIPISGPEIISKYYGESEQKLREIFEEAEKEGPTIIFIDELDSIAPKRDDVVGEVERRVV 297

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATNRP+SI+ ALRR GR DREIEI               +
Sbjct: 298 AQLLTLMDGLTSRGKVIVIAATNRPNSIDQALRRGGRFDREIEI--------------GI 343

Query: 592 PSPAQRLEILHALLSGM--EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    RL++L+    GM  E  L    +E ++  THGFVGADLA+LC EAA+  LRR
Sbjct: 344 PDRGGRLQVLYVHTRGMPIEQGL---NLENIADITHGFVGADLASLCKEAAMHALRR 397



 Score =  200 bits (508), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 98/230 (42%), Positives = 148/230 (64%), Gaps = 2/230 (0%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V +ED+GG +     + E +E P +H E F ++G  PP G+L++GPPG  KT++A+AVA
Sbjct: 172  EVSYEDIGGLKRELGLMREMIELPLRHPELFDKLGVDPPKGVLLYGPPGTGKTMIAKAVA 231

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE+  NF+ + GPE+ SK+ GESE+ +R +F +A    P+IIF DE+D +A  R  +   
Sbjct: 232  SESEANFIPISGPEIISKYYGESEQKLREIFEEAEKEGPTIIFIDELDSIAPKR--DDVV 289

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV++QLL  +DGL  R  V VIAATNRP+ ID AL R GRFDR + +G P+   R
Sbjct: 290  GEVERRVVAQLLTLMDGLTSRGKVIVIAATNRPNSIDQALRRGGRFDREIEIGIPDRGGR 349

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             ++  +H R +P    +N+  +A ++ G  GAD++ +C+EAA+ A+   L
Sbjct: 350  LQVLYVHTRGMPIEQGLNLENIADITHGFVGADLASLCKEAAMHALRRML 399



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/250 (38%), Positives = 150/250 (60%), Gaps = 17/250 (6%)

Query: 413 LGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL+K +  +++ +          ++L   P +G+LL GPPGTGKT LA+  A++S  N
Sbjct: 450 IGGLNKVKQELIEAVEWPLKYPEMFTALNTTPPRGILLFGPPGTGKTLLAKAVANESEAN 509

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG-EELSQRM 530
             ++ GPE++S+  GESE+A+ E F  A Q+AP VVF DELD++ P R  G  ++ ++R+
Sbjct: 510 FISIKGPELLSKYVGESEKAVRETFRKAKQAAPTVVFFDELDSMVPKRGMGSDQQATERV 569

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ +L  +DG+     ++++AATNRPD I+PAL RPGR DR           L+   P  
Sbjct: 570 VSQILTEIDGIEELKDIVIVAATNRPDIIDPALLRPGRFDR-----------LIYVRP-- 616

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
            P   +R +IL   LSG   +  D ++E L+  T G+VGAD+ A+C EAA++ LR   + 
Sbjct: 617 -PDKEERAKILDIHLSGKPIA-EDVKLEELAELTEGYVGADIEAICREAAMMTLREIIRP 674

Query: 651 QTSSDVLHST 660
             + D ++ T
Sbjct: 675 GMTKDEVYET 684


>gi|358055257|dbj|GAA98765.1| hypothetical protein E5Q_05453 [Mixia osmundae IAM 14324]
          Length = 746

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 149/283 (52%), Positives = 200/283 (70%), Gaps = 6/283 (2%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D E A    RPS MREV +E P+V W DVGGQ  VK +L E VEWP ++ ++FKR+G RP
Sbjct: 454  DLEAAFATTRPSGMREVYIETPRVSWHDVGGQESVKQRLRECVEWPLQYPDSFKRLGVRP 513

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPGCSKTL+A+A+AS+A +NFLAVKGPELF+K+VGESE+AVR LF KARA  
Sbjct: 514  PRGILLYGPPGCSKTLLAKALASQAKVNFLAVKGPELFNKYVGESERAVRELFRKARAAQ 573

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSIIF DEID +A  RG E +G   SDRV++ LL E+DG+ +   VT++AATNRPD ID 
Sbjct: 574  PSIIFLDEIDVIAGHRGTE-EGSGSSDRVLTSLLTEMDGIEELNGVTILAATNRPDVIDA 632

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC-LSEGCTGADISLI 987
            AL+RPGR DR+LYVGPP+   R  IF+    K+  + DV    LA  ++EGC+GA++  I
Sbjct: 633  ALMRPGRLDRILYVGPPDFEGRLAIFQSRFAKMSVAPDVAPSTLAGPITEGCSGAEVVSI 692

Query: 988  CREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYK 1026
            C++AA+ A++++  A  ++  H + A     R + P  +  Y+
Sbjct: 693  CQDAALRALKDDRKAPFVSRAHFEAAAKDIRRRITPDSLRFYE 735



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 147/244 (60%), Gaps = 23/244 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K+   +++++ +        +   L P +G+LLHGPPGTGKT L    A    + 
Sbjct: 213 VGGLGKQIETIRELVELPLRRPDVFAHFNLTPPRGLLLHGPPGTGKTLLCSAIAKSLALP 272

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           LF+++G  + S  +GE+E  L  +F+ A +++P++V IDE+D +AP R++ G E+ +R+V
Sbjct: 273 LFSISGSALGSPYHGETESRLRAIFEEAKEASPSLVLIDEIDGLAPKREEAG-EVERRVV 331

Query: 532 ATLLNLMDGV-CRTDG------VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
           ATLL LMDG+  + +G      ++VIAATNRP+SI+PALRRPGR D E+EI         
Sbjct: 332 ATLLTLMDGLDSKPEGGSESPRIIVIAATNRPNSIDPALRRPGRFDLEVEI--------- 382

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 VP    RLEIL  LL    HS     ++ +S   HGFVGADLA+L + A L  +
Sbjct: 383 -----GVPDLPARLEILQTLLRRTPHSCEPEALQSISDRAHGFVGADLASLVHSACLSAI 437

Query: 645 RRYS 648
           +R S
Sbjct: 438 KRSS 441



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 11/245 (4%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            ++ VGG  +    + E VE P +  + F      PP G+L+ GPPG  KTL+  A+A   
Sbjct: 210  YDAVGGLGKQIETIRELVELPLRRPDVFAHFNLTPPRGLLLHGPPGTGKTLLCSAIAKSL 269

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
             L   ++ G  L S + GE+E  +R++F +A+  +PS++  DEIDGLA    K  +   V
Sbjct: 270  ALPLFSISGSALGSPYHGETESRLRAIFEEAKEASPSLVLIDEIDGLAP---KREEAGEV 326

Query: 894  SDRVMSQLLVELDGLHQR-------VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
              RV++ LL  +DGL  +         + VIAATNRP+ IDPAL RPGRFD  + +G P+
Sbjct: 327  ERRVVATLLTLMDGLDSKPEGGSESPRIIVIAATNRPNSIDPALRRPGRFDLEVEIGVPD 386

Query: 947  ETDREEIFRIHLRKIPCSSDVN-IRELACLSEGCTGADISLICREAAISAIEENLDASRI 1005
               R EI +  LR+ P S +   ++ ++  + G  GAD++ +   A +SAI+ +  +   
Sbjct: 387  LPARLEILQTLLRRTPHSCEPEALQSISDRAHGFVGADLASLVHSACLSAIKRSSSSLLA 446

Query: 1006 TMQHL 1010
             MQ L
Sbjct: 447  GMQLL 451



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 15/212 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           +   LG+RP +G+LL+GPPG  KT LA+  A  + VN   V GPE+ ++  GESE+A+ E
Sbjct: 505 SFKRLGVRPPRGILLYGPPGCSKTLLAKALASQAKVNFLAVKGPELFNKYVGESERAVRE 564

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           +F  A  + P+++F+DE+D IA  R  + G   S R++ +LL  MDG+   +GV ++AAT
Sbjct: 565 LFRKARAAQPSIIFLDEIDVIAGHRGTEEGSGSSDRVLTSLLTEMDGIEELNGVTILAAT 624

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+ AL RPGRLDR           +L   P   P    RL I  +  + M  +  
Sbjct: 625 NRPDVIDAALMRPGRLDR-----------ILYVGP---PDFEGRLAIFQSRFAKMSVAPD 670

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            +        T G  GA++ ++C +AAL  L+
Sbjct: 671 VAPSTLAGPITEGCSGAEVVSICQDAALRALK 702


>gi|294494935|ref|YP_003541428.1| ATPase AAA [Methanohalophilus mahii DSM 5219]
 gi|292665934|gb|ADE35783.1| AAA family ATPase, CDC48 subfamily [Methanohalophilus mahii DSM 5219]
          Length = 743

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/280 (53%), Positives = 203/280 (72%), Gaps = 3/280 (1%)

Query: 744  KLELV--DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            KLE+   DFE+A  ++ PSAMREV++E+P V W+D+GG    +  + EAVEWP K  +  
Sbjct: 431  KLEVTPDDFEEALKEIEPSAMREVMVEIPSVGWDDIGGLDLARQDISEAVEWPLKWPDKI 490

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             ++G +PPTGIL++GPPG  KTL+A+AVA+EA  NF++VKGP++ SK+VGESEKA+R  F
Sbjct: 491  SQMGIKPPTGILLYGPPGTGKTLLAQAVANEANANFISVKGPQILSKYVGESEKAIRDTF 550

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESD-GVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR  AP IIFFDEID +++ R   SD G  VS++V++Q+L E+DGL     V VIAAT
Sbjct: 551  KKARQVAPCIIFFDEIDAISSTRQGGSDVGSRVSEQVVNQMLTEMDGLEPLNEVVVIAAT 610

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPALLR GRFDRL+ VG      RE+IFRIH   IP  SDV+IRELA ++EG  
Sbjct: 611  NRPDLIDPALLRSGRFDRLVMVGAALAEGREKIFRIHTMGIPLDSDVDIRELATMTEGYV 670

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            G+DI  ICREAA+ ++ E+ D  +++ +H  +A+  V+P+
Sbjct: 671  GSDIESICREAAMLSLREDFDNEKVSKRHFLSAMEKVKPT 710



 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 111/267 (41%), Positives = 163/267 (61%), Gaps = 20/267 (7%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG R    ++ E +E P KH E F R+   PP G++++GPPG  KTL+ARAVAS
Sbjct: 185  INYEDIGGLRTEIQRVREMIELPLKHHELFLRLNIDPPKGVILYGPPGTGKTLIARAVAS 244

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+   F+ + GPE+  K+ GESE+ +R +F +A  NAPSIIF DEID +A  R  E    
Sbjct: 245  ESNAYFINIAGPEIMGKYYGESEERLRKIFDEAAENAPSIIFVDEIDSIAPKR--EDVTG 302

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DG+ +R  V VIAATNR D IDPAL RPGRFDR + +G P+  DR 
Sbjct: 303  EVERRVVAQLLTLMDGMDERKQVVVIAATNRLDSIDPALRRPGRFDREIEIGVPDSEDRL 362

Query: 952  EIFRIHLRKIPCSSDVN---IRELACLSEGCTGADISLICREAAISAI------------ 996
            EI +IH R +P + +++      LA  ++G  GAD+  + +EA++ A+            
Sbjct: 363  EILQIHTRGMPLNENIDEEYFEHLAEYTQGFVGADLLALVQEASMRALRRLLPDINLDEE 422

Query: 997  ---EENLDASRITMQHLKTAIRHVQPS 1020
               +E L+   +T    + A++ ++PS
Sbjct: 423  EIPQEILEKLEVTPDDFEEALKEIEPS 449



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/280 (41%), Positives = 163/280 (58%), Gaps = 26/280 (9%)

Query: 379 PLNAVSKSLREGTL---PNAQIEFQNVQATVEQDISK------LGGLSKEYAILKDII-I 428
           PL AV     +G L    N QI+ Q       +  ++      +GGL  E   ++++I +
Sbjct: 147 PLIAVDTEPSDGILIINENTQIQLQQKPVVGYEGAARGINYEDIGGLRTEIQRVREMIEL 206

Query: 429 SSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGES 488
                     L + P KGV+L+GPPGTGKT +AR  A +S      + GPE++ + YGES
Sbjct: 207 PLKHHELFLRLNIDPPKGVILYGPPGTGKTLIARAVASESNAYFINIAGPEIMGKYYGES 266

Query: 489 EQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVL 548
           E+ L ++FD A+++AP+++F+DE+D+IAP R+D   E+ +R+VA LL LMDG+     V+
Sbjct: 267 EERLRKIFDEAAENAPSIIFVDEIDSIAPKREDVTGEVERRVVAQLLTLMDGMDERKQVV 326

Query: 549 VIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
           VIAATNR DSI+PALRRPGR DREIEI               VP    RLEIL     GM
Sbjct: 327 VIAATNRLDSIDPALRRPGRFDREIEI--------------GVPDSEDRLEILQIHTRGM 372

Query: 609 --EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
               ++ +   E+L+  T GFVGADL AL  EA++  LRR
Sbjct: 373 PLNENIDEEYFEHLAEYTQGFVGADLLALVQEASMRALRR 412



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 134/213 (62%), Gaps = 18/213 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +S +G++P  G+LL+GPPGTGKT LA+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 490 ISQMGIKPPTGILLYGPPGTGKTLLAQAVANEANANFISVKGPQILSKYVGESEKAIRDT 549

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG---GEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q AP ++F DE+DAI+  R+ G   G  +S+++V  +L  MDG+   + V+VIAA
Sbjct: 550 FKKARQVAPCIIFFDEIDAISSTRQGGSDVGSRVSEQVVNQMLTEMDGLEPLNEVVVIAA 609

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+PAL R GR DR + +             AA+    +++  +H +   ++   
Sbjct: 610 TNRPDLIDPALLRSGRFDRLVMVG------------AALAEGREKIFRIHTMGIPLDS-- 655

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D ++  L+  T G+VG+D+ ++C EAA++ LR
Sbjct: 656 -DVDIRELATMTEGYVGSDIESICREAAMLSLR 687


>gi|148642702|ref|YP_001273215.1| cell division protein CDC48 [Methanobrevibacter smithii ATCC 35061]
 gi|148551719|gb|ABQ86847.1| cell division control protein Cdc48, AAA+ ATPase family
            [Methanobrevibacter smithii ATCC 35061]
          Length = 730

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 139/272 (51%), Positives = 195/272 (71%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A  +++PSA+REV+++VP VKW+DVGG  +VK +L EAVEWP KH E F++ G +P
Sbjct: 449  DFKSALKEIQPSALREVLVQVPNVKWDDVGGLDDVKQELKEAVEWPLKHPEKFEKFGVKP 508

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G L++G PG  KTL+A+AVASE+  NF+++KGPEL SKWVGESE+ VR +F KA+  A
Sbjct: 509  PKGTLLYGVPGTGKTLLAKAVASESEANFISIKGPELLSKWVGESEQGVREVFRKAKQTA 568

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A+ R        V+ RV++QLL E+DGL +  +V +IAATNRPD +D 
Sbjct: 569  PTVIFFDEIDSIASTRSANDSDSGVTKRVVNQLLTEMDGLEELEDVAIIAATNRPDILDA 628

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
             L+RPGRFDR + V  PNE  R  IF++H   +P + DV++ +LA  ++G  GADI  +C
Sbjct: 629  GLMRPGRFDRHIKVDLPNEDARLSIFKVHTEGMPLADDVSLEKLAKQTDGYVGADIEAVC 688

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAA+  +  NLDA  +  ++ K A+  V+PS
Sbjct: 689  REAAMLTLRNNLDAENVPYKYFKEALEKVKPS 720



 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 115/263 (43%), Positives = 165/263 (62%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG ++   ++ E +E P K  E F ++G  PP G+LM GPPG  KTL+A+AVAS
Sbjct: 200  VSYEDIGGLKDEVKKVREMIEIPLKRPELFDKLGIAPPKGVLMHGPPGTGKTLLAKAVAS 259

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F+A+ GPE+ SK+VG SE+ +R  F +A  NAPSIIF DE+D +A  R +++ G 
Sbjct: 260  ESDAHFIAINGPEIMSKYVGGSEENLREYFEEAEENAPSIIFIDELDAIAPKR-EDTQG- 317

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                R ++QLL  +DGL  R  V VI ATNRPD +D AL RPGRFDR + +G P+  +RE
Sbjct: 318  ETERRTVAQLLTLMDGLKSRGQVVVIGATNRPDSLDQALRRPGRFDREIEIGVPDSEERE 377

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            EI  IH R +P + DV++ +LA  + G  GAD+  +C+EAA+  +              E
Sbjct: 378  EILEIHTRNMPLAEDVDLHKLASTTHGFVGADLESLCKEAAMRVVRRIIPEIKNDEEIPE 437

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E L    +T    K+A++ +QPS
Sbjct: 438  EVLKKIVVTNDDFKSALKEIQPS 460



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/265 (43%), Positives = 154/265 (58%), Gaps = 26/265 (9%)

Query: 393 PNAQIEF----------QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGL 441
           PN ++E           + V   V+     +GGL  E   ++++I I          LG+
Sbjct: 175 PNTEVELHESPVDVSNIEGVTNLVDVSYEDIGGLKDEVKKVREMIEIPLKRPELFDKLGI 234

Query: 442 RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
            P KGVL+HGPPGTGKT LA+  A +S  +   +NGPE++S+  G SE+ L E F+ A +
Sbjct: 235 APPKGVLMHGPPGTGKTLLAKAVASESDAHFIAINGPEIMSKYVGGSEENLREYFEEAEE 294

Query: 502 SAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           +AP+++FIDELDAIAP R+D   E  +R VA LL LMDG+     V+VI ATNRPDS++ 
Sbjct: 295 NAPSIIFIDELDAIAPKREDTQGETERRTVAQLLTLMDGLKSRGQVVVIGATNRPDSLDQ 354

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
           ALRRPGR DREIEI               VP   +R EIL      M  +  D ++  L+
Sbjct: 355 ALRRPGRFDREIEI--------------GVPDSEEREEILEIHTRNMPLA-EDVDLHKLA 399

Query: 622 MATHGFVGADLAALCNEAALVCLRR 646
             THGFVGADL +LC EAA+  +RR
Sbjct: 400 STTHGFVGADLESLCKEAAMRVVRR 424



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 126/212 (59%), Gaps = 17/212 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G++P KG LL+G PGTGKT LA+  A +S  N  ++ GPE++S+  GESEQ + EV
Sbjct: 501 FEKFGVKPPKGTLLYGVPGTGKTLLAKAVASESEANFISIKGPELLSKWVGESEQGVREV 560

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q+AP V+F DE+D+IA  R   D    +++R+V  LL  MDG+   + V +IAAT
Sbjct: 561 FRKAKQTAPTVIFFDEIDSIASTRSANDSDSGVTKRVVNQLLTEMDGLEELEDVAIIAAT 620

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD ++  L RPGR DR I++D+              P+   RL I      GM  +  
Sbjct: 621 NRPDILDAGLMRPGRFDRHIKVDL--------------PNEDARLSIFKVHTEGMPLA-D 665

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D  +E L+  T G+VGAD+ A+C EAA++ LR
Sbjct: 666 DVSLEKLAKQTDGYVGADIEAVCREAAMLTLR 697


>gi|242398512|ref|YP_002993936.1| CDC48/VCP like protein, AAA superfamily [Thermococcus sibiricus MM
            739]
 gi|242264905|gb|ACS89587.1| CDC48/VCP like protein, AAA superfamily [Thermococcus sibiricus MM
            739]
          Length = 810

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 154/309 (49%), Positives = 207/309 (66%), Gaps = 21/309 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +A   V PSA+REV+LE+P V+W D+GG  EVK QL EAVEWP K+ EAF 
Sbjct: 486  LKVTRRDFYEALKMVEPSALREVLLEIPNVRWNDIGGLEEVKQQLREAVEWPLKYPEAFM 545

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G  PP GIL++GPPG  KTL+A+AVA+E+  NF+ ++GPE+ SKWVGESEK +R +F 
Sbjct: 546  AMGINPPKGILLYGPPGTGKTLLAKAVATESEANFIGIRGPEVLSKWVGESEKNIREIFR 605

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DEID +A  RG  SD   V+DR+++QLL E+DG+ +   V VIAATNR
Sbjct: 606  KARQAAPTVIFIDEIDAIAPRRG--SDVNRVTDRLINQLLTEMDGIEENSGVVVIAATNR 663

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDR++ V  P+   R EIF++H R +P + DVN+ ELA  +EG TGA
Sbjct: 664  PDILDPALLRPGRFDRIILVPAPDVKARLEIFKVHTRNVPLAKDVNLEELAKRTEGYTGA 723

Query: 983  DISLICREAAIS----AIEENL-----------DASRITMQHLKTAIRHVQPS----EIH 1023
            DI  + REAA +    AI E +           +  ++TM+  + A++ V PS     + 
Sbjct: 724  DIEAVVREAAFNTMRRAISEGIIKPGTRASDIRERVKVTMRDFEEAMKKVGPSVSEETME 783

Query: 1024 SYKELSAKF 1032
             YK +   F
Sbjct: 784  YYKRIEEMF 792



 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/246 (43%), Positives = 156/246 (63%), Gaps = 6/246 (2%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG ++   ++ E +E P KH E F+++G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 179  VTYEDIGGLKDAIQKIREMIELPLKHPEVFEKLGIEPPKGVLLYGPPGTGKTLLAKAVAN 238

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EA  +F+A+ GPE+ SK+ GESE+ +R +F ++  NAPSIIF DEID +A  RG+ +   
Sbjct: 239  EANAHFIAINGPEIMSKYYGESEERLREVFKESEENAPSIIFIDEIDAIAPKRGEVTG-- 296

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNRPD +DPAL RPGRFDR + +G P++  R+
Sbjct: 297  EVEKRVVAQLLTLMDGLKSRGKVIVIGATNRPDALDPALRRPGRFDREIEIGVPDKQGRK 356

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EI +IH R +P   D    E+  + +     D      E A+  IE+  D   I    ++
Sbjct: 357  EILQIHTRGMPIEPDFRKEEVKKVLKELKQDDRFRDAAERALYKIEDLADKEEI----IR 412

Query: 1012 TAIRHV 1017
             AIR +
Sbjct: 413  RAIRDI 418



 Score =  177 bits (450), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 90/197 (45%), Positives = 124/197 (62%), Gaps = 15/197 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      ++++I +          LG+ P KGVLL+GPPGTGKT LA+  A+++  +
Sbjct: 184 IGGLKDAIQKIREMIELPLKHPEVFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEANAH 243

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +NGPE++S+ YGESE+ L EVF  + ++AP+++FIDE+DAIAP R +   E+ +R+V
Sbjct: 244 FIAINGPEIMSKYYGESEERLREVFKESEENAPSIIFIDEIDAIAPKRGEVTGEVEKRVV 303

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNRPD+++PALRRPGR DREIEI               V
Sbjct: 304 AQLLTLMDGLKSRGKVIVIGATNRPDALDPALRRPGRFDREIEI--------------GV 349

Query: 592 PSPAQRLEILHALLSGM 608
           P    R EIL     GM
Sbjct: 350 PDKQGRKEILQIHTRGM 366



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 126/209 (60%), Gaps = 15/209 (7%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
           ++G+ P KG+LL+GPPGTGKT LA+  A +S  N   + GPEV+S+  GESE+ + E+F 
Sbjct: 546 AMGINPPKGILLYGPPGTGKTLLAKAVATESEANFIGIRGPEVLSKWVGESEKNIREIFR 605

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            A Q+AP V+FIDE+DAIAP R      ++ R++  LL  MDG+    GV+VIAATNRPD
Sbjct: 606 KARQAAPTVIFIDEIDAIAPRRGSDVNRVTDRLINQLLTEMDGIEENSGVVVIAATNRPD 665

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            ++PAL RPGR DR I +            PA  P    RLEI       +  +  D  +
Sbjct: 666 ILDPALLRPGRFDRIILV------------PA--PDVKARLEIFKVHTRNVPLA-KDVNL 710

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRR 646
           E L+  T G+ GAD+ A+  EAA   +RR
Sbjct: 711 EELAKRTEGYTGADIEAVVREAAFNTMRR 739


>gi|70606569|ref|YP_255439.1| SAV protein-like [Sulfolobus acidocaldarius DSM 639]
 gi|449066788|ref|YP_007433870.1| SAV protein-like protein [Sulfolobus acidocaldarius N8]
 gi|449069061|ref|YP_007436142.1| SAV protein-like protein [Sulfolobus acidocaldarius Ron12/I]
 gi|30088847|gb|AAP13472.1| AAA family ATPase [Sulfolobus acidocaldarius]
 gi|68567217|gb|AAY80146.1| SAV protein-like [Sulfolobus acidocaldarius DSM 639]
 gi|449035296|gb|AGE70722.1| SAV protein-like protein [Sulfolobus acidocaldarius N8]
 gi|449037569|gb|AGE72994.1| SAV protein-like protein [Sulfolobus acidocaldarius Ron12/I]
          Length = 773

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 138/258 (53%), Positives = 197/258 (76%), Gaps = 1/258 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF KA   + PS +RE+ +EVP+V W D+GG  EVK +L E VE+P K++E ++
Sbjct: 437  MEVRMDDFLKAFKDIVPSGLREIYIEVPEVHWFDIGGLEEVKEELREVVEYPLKYREVYE 496

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +   PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 497  NMSIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 556

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IFFDEID +A IRG  +D   V++R+++QLL E+DG+ +  NV VIAATNR
Sbjct: 557  KARQAAPTVIFFDEIDSIAPIRGLSTDS-GVTERIVNQLLAEMDGIEKLENVVVIAATNR 615

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP++T R EI ++H + +P + DV++ ++A  +EG TGA
Sbjct: 616  PDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGA 675

Query: 983  DISLICREAAISAIEENL 1000
            D++ + REAA+ AI E +
Sbjct: 676  DLAAVVREAALRAIREQM 693



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 115/227 (50%), Positives = 161/227 (70%), Gaps = 2/227 (0%)

Query: 770 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           P+V +ED+GG +E+  ++ E VE P +H E FKR+G  PP GIL++GPPG  KTL+A+AV
Sbjct: 191 PRVTYEDIGGMKEIIQKIRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAV 250

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
           A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DEID +A  R  E  
Sbjct: 251 ANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEIDAIAPKR-DEVI 309

Query: 890 GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
           G  V  RV++QLL  +DGL  R NV VIAATNRP+ +DPAL RPGRFDR + +  P++  
Sbjct: 310 G-EVERRVVAQLLTLMDGLENRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQG 368

Query: 950 REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
           R EI +IH R +P S DV++ +LA ++ G TGAD+S + REAA++A+
Sbjct: 369 RLEILQIHTRNMPLSKDVDLHKLAEMTHGYTGADLSALVREAAMNAL 415



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 139/212 (65%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 222 FKRLGIEPPKGILLYGPPGVGKTLLAKAVANETDAYFTSINGPEIMSKFYGESEQRLREI 281

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 282 FEDAKKHAPAIIFIDEIDAIAPKRDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNR 341

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREIEI +              P    RLEIL      M  S  D 
Sbjct: 342 PNAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLS-KDV 386

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           ++  L+  THG+ GADL+AL  EAA+  LRRY
Sbjct: 387 DLHKLAEMTHGYTGADLSALVREAAMNALRRY 418



 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 107/308 (34%), Positives = 164/308 (53%), Gaps = 47/308 (15%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL+ ++  P++ E M+   + F+   +         + V   LRE  +   ++ + ++  
Sbjct: 423 DLSQDKIPPEILEKMEVRMDDFLKAFK---------DIVPSGLREIYIEVPEVHWFDI-- 471

Query: 405 TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
                    GGL +    L++++      +    ++ + P KG+LL GPPGTGKT LA+ 
Sbjct: 472 ---------GGLEEVKEELREVVEYPLKYREVYENMSIEPPKGILLFGPPGTGKTMLAKA 522

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---K 520
            A +SG N   V GPE++S+  GESE+A+ E+F  A Q+AP V+F DE+D+IAP R    
Sbjct: 523 VATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLST 582

Query: 521 DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DM 577
           D G  +++R+V  LL  MDG+ + + V+VIAATNRPD ++PAL RPGR DR I +   D 
Sbjct: 583 DSG--VTERIVNQLLAEMDGIEKLENVVVIAATNRPDILDPALLRPGRFDRLIYVPPPDK 640

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
           +  F +LK     VP                     D  +E ++    G+ GADLAA+  
Sbjct: 641 TARFEILKVHTKNVPLAE------------------DVSLEDIAEKAEGYTGADLAAVVR 682

Query: 638 EAALVCLR 645
           EAAL  +R
Sbjct: 683 EAALRAIR 690


>gi|341893403|gb|EGT49338.1| hypothetical protein CAEBREN_08050 [Caenorhabditis brenneri]
          Length = 713

 Score =  306 bits (784), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 152/327 (46%), Positives = 212/327 (64%), Gaps = 11/327 (3%)

Query: 691  LDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDF 750
            LD  S  + D P+ L            E+A + H         +  + +      +L   
Sbjct: 375  LDILSRISDDFPSELRL----------EVARHTHGFTGGDLCSLLKASRYARGNTQLEKI 424

Query: 751  EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
              AR ++RP+ +R+ ILEVP V W D+GG  E+K ++ +AV WPQ+H EAF+R G  PP 
Sbjct: 425  NDARKRMRPTGIRQFILEVPNVSWNDIGGNDELKLEIQQAVIWPQQHPEAFERFGIDPPA 484

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            GIL++GPPGCSKTL+ARA+A+EA +NFLAVKGPELFSKWVG+SEKA+R LFA+AR  +P+
Sbjct: 485  GILLYGPPGCSKTLIARALANEAKMNFLAVKGPELFSKWVGDSEKAIRDLFARARQVSPT 544

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            I+FFDEID + + RG E     VSDRV++QLL ELDGL +   V ++AATNRPD++D AL
Sbjct: 545  IVFFDEIDAVGSSRGSEKSS-GVSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSAL 603

Query: 931  LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICRE 990
            LRPGR DR +YVG P E  R+ I  +  RK+       I++L   + G +GA++  +CR 
Sbjct: 604  LRPGRLDRAIYVGLPCEATRKAILEMRTRKMKIDEGSIIQKLVEKTSGYSGAELVAVCRT 663

Query: 991  AAISAIEENLDASRITMQHLKTAIRHV 1017
            AA+ A+ EN++AS +  +H + A+  V
Sbjct: 664  AAMFAMRENIEASVVQWKHFEEALSAV 690



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 124/213 (58%), Gaps = 26/213 (12%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G+ P  G+LL+GPPG  KT +AR  A+++ +N   V GPE+ S+  G+SE+A+ ++F  
Sbjct: 478 FGIDPPAGILLYGPPGCSKTLIARALANEAKMNFLAVKGPELFSKWVGDSEKAIRDLFAR 537

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEE---LSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q +P +VF DE+DA+  +R  G E+   +S R++A LL  +DG+ ++  V+++AATNR
Sbjct: 538 ARQVSPTIVFFDEIDAVGSSR--GSEKSSGVSDRVLAQLLTELDGLEKSSRVILLAATNR 595

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM---EHSL 612
           PD ++ AL RPGRLDR I +               +P  A R  IL      M   E S+
Sbjct: 596 PDQLDSALLRPGRLDRAIYV--------------GLPCEATRKAILEMRTRKMKIDEGSI 641

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           +   VE     T G+ GA+L A+C  AA+  +R
Sbjct: 642 IQKLVE----KTSGYSGAELVAVCRTAAMFAMR 670


>gi|435850742|ref|YP_007312328.1| AAA family ATPase, CDC48 subfamily [Methanomethylovorans hollandica
            DSM 15978]
 gi|433661372|gb|AGB48798.1| AAA family ATPase, CDC48 subfamily [Methanomethylovorans hollandica
            DSM 15978]
          Length = 743

 Score =  306 bits (784), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 150/296 (50%), Positives = 202/296 (68%), Gaps = 14/296 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A   + PSAMREV +EV  V+W+D+GG    K +L+EAVEWP K+ E F+ + T P
Sbjct: 423  DFDSAFKNIEPSAMREVFVEVAHVRWDDIGGLETAKQELIEAVEWPLKYPEMFEAVNTTP 482

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+FGPPG  KT++A+AVASE+  NF+++KGPEL SK+VGESEKAVR  F KA+  A
Sbjct: 483  PRGILLFGPPGTGKTMLAKAVASESEANFISIKGPELLSKYVGESEKAVRETFRKAKQAA 542

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG  +D   V++RV+SQ+L E+DG+ +  +V VIAATNRPD IDP
Sbjct: 543  PTVIFFDEIDAMAPERGASTDA-HVTERVVSQILTEIDGVEELKDVVVIAATNRPDIIDP 601

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDRL+YV PP +  R +IF IH+   P + DV++  LA ++EG  GADI  IC
Sbjct: 602  ALLRPGRFDRLIYVKPPEKEGRRKIFEIHILGKPLAEDVDLNLLADMTEGYVGADIEAIC 661

Query: 989  REAAISAIEENL-------------DASRITMQHLKTAIRHVQPSEIHSYKELSAK 1031
            REA++ A+   +             +  RI+M H + AI  ++P+   S   L  K
Sbjct: 662  REASMLALRSVILPGMTKEEMKVLANEIRISMTHFRKAIARIKPTTSRSCMNLYEK 717



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/263 (42%), Positives = 168/263 (63%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +     + E +E P KH E F+++G  PP G+L++G PG  KT++ARAVAS
Sbjct: 174  ITYEDIGGLKRELGMVREMIELPLKHPEIFQKLGIDPPKGVLLYGQPGTGKTMIARAVAS 233

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF+++ GPE+ SK+ GESE+ +R +F  A+ +APSIIF DEID +A  R  E  G 
Sbjct: 234  ETDANFISISGPEIVSKYYGESEQKLRQMFEDAKKDAPSIIFIDEIDSIAPKR-DEVMG- 291

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNRP+ IDPAL R GRFDR + VG P+   R 
Sbjct: 292  EVERRVVAQLLSLMDGLRSRGRVIVIAATNRPNSIDPALRRGGRFDREIEVGIPDRNGRL 351

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            +I  +H R +P  +D+++ ++A ++ G  GAD+S +C+EAA+ A+              +
Sbjct: 352  QILYVHTRGMPIENDIDLEQIAAVTHGYVGADLSSLCKEAAMHALRRMLPEMRIEDDIPQ 411

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E +D+  +T     +A ++++PS
Sbjct: 412  EVMDSLVVTRADFDSAFKNIEPS 434



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/247 (44%), Positives = 160/247 (64%), Gaps = 18/247 (7%)

Query: 403 QATVEQDIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTS 459
           +AT    I+   +GGL +E  +++++I +          LG+ P KGVLL+G PGTGKT 
Sbjct: 167 EATTRDHITYEDIGGLKRELGMVREMIELPLKHPEIFQKLGIDPPKGVLLYGQPGTGKTM 226

Query: 460 LARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR 519
           +AR  A ++  N  +++GPE+VS+ YGESEQ L ++F+ A + AP+++FIDE+D+IAP R
Sbjct: 227 IARAVASETDANFISISGPEIVSKYYGESEQKLRQMFEDAKKDAPSIIFIDEIDSIAPKR 286

Query: 520 KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSF 579
            +   E+ +R+VA LL+LMDG+     V+VIAATNRP+SI+PALRR GR DREIE+    
Sbjct: 287 DEVMGEVERRVVAQLLSLMDGLRSRGRVIVIAATNRPNSIDPALRRGGRFDREIEV---- 342

Query: 580 LFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
                      +P    RL+IL+    GM     D ++E ++  THG+VGADL++LC EA
Sbjct: 343 ----------GIPDRNGRLQILYVHTRGMPIE-NDIDLEQIAAVTHGYVGADLSSLCKEA 391

Query: 640 ALVCLRR 646
           A+  LRR
Sbjct: 392 AMHALRR 398



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 125/204 (61%), Gaps = 16/204 (7%)

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P +G+LL GPPGTGKT LA+  A +S  N  ++ GPE++S+  GESE+A+ E F  A Q+
Sbjct: 482 PPRGILLFGPPGTGKTMLAKAVASESEANFISIKGPELLSKYVGESEKAVRETFRKAKQA 541

Query: 503 APAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           AP V+F DE+DA+AP R    +  +++R+V+ +L  +DGV     V+VIAATNRPD I+P
Sbjct: 542 APTVIFFDEIDAMAPERGASTDAHVTERVVSQILTEIDGVEELKDVVVIAATNRPDIIDP 601

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
           AL RPGR DR           L+   P   P    R +I    + G   +  D ++  L+
Sbjct: 602 ALLRPGRFDR-----------LIYVKP---PEKEGRRKIFEIHILGKPLA-EDVDLNLLA 646

Query: 622 MATHGFVGADLAALCNEAALVCLR 645
             T G+VGAD+ A+C EA+++ LR
Sbjct: 647 DMTEGYVGADIEAICREASMLALR 670


>gi|452207172|ref|YP_007487294.1| AAA-type ATPase (CDC48 subfamily) [Natronomonas moolapensis 8.8.11]
 gi|452083272|emb|CCQ36559.1| AAA-type ATPase (CDC48 subfamily) [Natronomonas moolapensis 8.8.11]
          Length = 740

 Score =  306 bits (783), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 147/280 (52%), Positives = 198/280 (70%), Gaps = 4/280 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V PSAMREV++E+PKV W+DVGG  + K Q+ E+VEWP    E F R+G  P
Sbjct: 436  DFRNALNEVDPSAMREVLVELPKVSWDDVGGLTDEKNQVKESVEWPMNSPEKFDRMGINP 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PAGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG E  G +VS+RV++QLL ELDGL    +V VI ATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPGRGGEV-GSNVSERVVNQLLTELDGLEDMDDVMVIGATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P+   RE+I RIH    P + DV++RE+A ++    G+D+  I 
Sbjct: 615  ALIRSGRFDRLVMIGEPDTEGREQILRIHTDDTPLAPDVSLREIAEMTGSYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSY 1025
            REAAI A+ E+  A  + M+H + A+  V+P+   +I SY
Sbjct: 675  REAAIEALREDDAADDVEMRHFRQALESVRPTITEDIRSY 714



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/229 (46%), Positives = 151/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATNR D +DPAL RPGRFDR + +G P+ET R+
Sbjct: 304  EVERRVVAQLLTMMDGLESRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDETGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P + DV++  +A  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLADDVSLDTMADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 107/236 (45%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VIAATNR D+++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLESRGQVIVIAATNRVDAVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  +  D  ++ ++  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDETGRKEILQIHTRGMPLA-DDVSLDTMADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 138/241 (57%), Gaps = 29/241 (12%)

Query: 413 LGGLSKEYAILKDII---ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           +GGL+ E   +K+ +   ++S  K     +G+ P  GVLL+GPPGTGKT +A+  A+++ 
Sbjct: 464 VGGLTDEKNQVKESVEWPMNSPEK--FDRMGINPPAGVLLYGPPGTGKTLIAKAVANETN 521

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE---EL 526
            N  +V GP+++S+  GESE+A+ + F  A Q +P V+F DELD++AP R  GGE    +
Sbjct: 522 ANFISVRGPQLLSKWVGESEKAIRQTFRKARQVSPTVIFFDELDSLAPGR--GGEVGSNV 579

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           S+R+V  LL  +DG+   D V+VI ATNRPD I+PAL R GR DR + I           
Sbjct: 580 SERVVNQLLTELDGLEDMDDVMVIGATNRPDMIDPALIRSGRFDRLVMI----------- 628

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCL 644
                P    R +IL       + + L  +V    +A  T  +VG+DL ++  EAA+  L
Sbjct: 629 ---GEPDTEGREQILRI---HTDDTPLAPDVSLREIAEMTGSYVGSDLESIAREAAIEAL 682

Query: 645 R 645
           R
Sbjct: 683 R 683


>gi|403214545|emb|CCK69046.1| hypothetical protein KNAG_0B06160 [Kazachstania naganishii CBS 8797]
          Length = 772

 Score =  306 bits (783), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 142/276 (51%), Positives = 204/276 (73%), Gaps = 3/276 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ ++D E A ++VRPSAMRE+ LE+PKV W D+GGQ E+K +L E ++ P    E F 
Sbjct: 476  LKVTMLDLENAMLEVRPSAMREIFLEMPKVYWSDIGGQDELKRKLKEMIQLPLDASETFA 535

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G   P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+F+K+VGESE+A+R +F 
Sbjct: 536  RLGVSAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFR 595

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID L+  R  ES   S ++ V++ LL E+DG+ +   V ++AATNR
Sbjct: 596  KARAASPSIIFFDEIDALSPDRDGES--TSAANHVLTSLLNEIDGVEELNGVVIVAATNR 653

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCTG 981
            PD+IDPALLRPGR DR +YVGPP+   R +I R    K    SS V++  LA  ++GC+G
Sbjct: 654  PDEIDPALLRPGRLDRHIYVGPPDYDARLQILRKCTSKFNIESSGVDLEALAQKTDGCSG 713

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHV 1017
            A++ L+C+EA +++I EN++  +++ +H + A+R +
Sbjct: 714  AEVVLLCQEAGLASIMENVETEKVSTEHFEKALRDL 749



 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 101/239 (42%), Positives = 148/239 (61%), Gaps = 19/239 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E  ILK+ I +        +  G+ P +G++LHGPPGTGKT + R  AH +  +
Sbjct: 241 VGGLFSEIEILKNTIELPLRQPQLFTDFGVTPPRGIMLHGPPGTGKTMILRCVAHSTNAH 300

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
           + T++GP +VS+  GE+E  L ++F+ A +  P++VFIDE+D+IAP R  D   E   R+
Sbjct: 301 VLTIDGPSIVSKYLGETEATLRDIFNEAVKYQPSIVFIDEIDSIAPNRANDDSGEAESRV 360

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           VATLL LMDG+  +  V+VI ATNRP+S++PALRRPGR D+E+EI               
Sbjct: 361 VATLLTLMDGMGASGKVVVIGATNRPNSVDPALRRPGRFDQEVEI--------------G 406

Query: 591 VPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +P    RL+ILH     M      L + +++ ++  THG+VGADL+ALC EA +  ++R
Sbjct: 407 IPDAEARLDILHKQFQRMSSDRQELTEEDIKTIASKTHGYVGADLSALCREAVMKTIQR 465



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 163/314 (51%), Gaps = 26/314 (8%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +  VGG       L   +E P +  + F   G  PP GI++ GPPG  KT++ R VA 
Sbjct: 236  VTYNSVGGLFSEIEILKNTIELPLRQPQLFTDFGVTPPRGIMLHGPPGTGKTMILRCVAH 295

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
                + L + GP + SK++GE+E  +R +F +A    PSI+F DEID +A  R  +  G 
Sbjct: 296  STNAHVLTIDGPSIVSKYLGETEATLRDIFNEAVKYQPSIVFIDEIDSIAPNRANDDSGE 355

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            + S RV++ LL  +DG+     V VI ATNRP+ +DPAL RPGRFD+ + +G P+   R 
Sbjct: 356  AES-RVVATLLTLMDGMGASGKVVVIGATNRPNSVDPALRRPGRFDQEVEIGIPDAEARL 414

Query: 952  EIFRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS---- 1003
            +I     +++       ++ +I+ +A  + G  GAD+S +CREA +  I+  ++ +    
Sbjct: 415  DILHKQFQRMSSDRQELTEEDIKTIASKTHGYVGADLSALCREAVMKTIQRGINNTLDRE 474

Query: 1004 --RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 1046
              ++TM  L+ A+  V+P               S+I    EL  K + ++    +A E+ 
Sbjct: 475  QLKVTMLDLENAMLEVRPSAMREIFLEMPKVYWSDIGGQDELKRKLKEMIQLPLDASETF 534

Query: 1047 YQLRPSKSIGSNMW 1060
             +L  S   G  ++
Sbjct: 535  ARLGVSAPKGVLLY 548



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/235 (37%), Positives = 132/235 (56%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    LK++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 508 SDIGGQDELKRKLKEMIQLPLDASETFARLGVSAPKGVLLYGPPGCSKTLTAKALATESG 567

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE+ ++  GESE+A+ E+F  A  ++P+++F DE+DA++P R       +  
Sbjct: 568 LNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDALSPDRDGESTSAANH 627

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV   +GV+++AATNRPD I+PAL RPGRLDR I +              
Sbjct: 628 VLTSLLNEIDGVEELNGVVIVAATNRPDEIDPALLRPGRLDRHIYV-------------- 673

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RL+IL    S         ++E L+  T G  GA++  LC EA L  +
Sbjct: 674 GPPDYDARLQILRKCTSKFNIESSGVDLEALAQKTDGCSGAEVVLLCQEAGLASI 728


>gi|392575123|gb|EIW68257.1| hypothetical protein TREMEDRAFT_32265, partial [Tremella mesenterica
            DSM 1558]
          Length = 536

 Score =  305 bits (782), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 144/274 (52%), Positives = 202/274 (73%), Gaps = 7/274 (2%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            +RPS MREV +E P V+W D+GGQ EVK +L E VEWP  H++ F R+G   P G+L++G
Sbjct: 255  MRPSTMREVFVETPSVRWSDIGGQEEVKQKLRECVEWPLLHRDTFLRLGVEAPRGVLLYG 314

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGCSKT+ A+A+A+E+GLNFLAVKGPEL +K+VGESE+AVR +F KA+A APSI+FFDE
Sbjct: 315  PPGCSKTMTAKALATESGLNFLAVKGPELLNKYVGESERAVREVFRKAQAAAPSILFFDE 374

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID L + R   SDG    + V++ LL E+DG+ +   VT++AATNRPD +D AL+RPGR 
Sbjct: 375  IDALGSSR---SDGDGPHNGVLTSLLNEMDGIVELSGVTIVAATNRPDVLDSALMRPGRL 431

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR+LYVG P+   R+EIF++ L K+     V++ ELA L+EGC+GA+++ IC++AA++A+
Sbjct: 432  DRILYVGAPDLDARKEIFKLRLAKMAVEPRVDVVELARLAEGCSGAEVASICQDAALTAM 491

Query: 997  EENLDASRITMQHL----KTAIRHVQPSEIHSYK 1026
             E+L+A  + + HL    KT  R + P+ I  Y+
Sbjct: 492  NEDLNAPYVKLSHLVHSAKTVRRRITPTMIEYYE 525



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/249 (45%), Positives = 153/249 (61%), Gaps = 19/249 (7%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD- 467
            S LGGL  +   ++ ++ I     +T S  GL+P +G+LL+GPPGTGKT+LAR  A   
Sbjct: 4   FSTLGGLDSQIRQIRTLLEIPLKHPTTYSLFGLKPPRGILLYGPPGTGKTALARAVASAL 63

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
            G +   VNGPE+ S  +GE+E+ L  VF+ A + +P VV +DE+DA+ P R   G E+ 
Sbjct: 64  PGCSCIVVNGPELSSAYHGETEEKLRGVFEEARKKSPCVVVLDEIDALCPKRDGDGGEVE 123

Query: 528 QRMVATLLNLMDGVCRTD---GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
           +R+VATLL LMDG+   D    V VIAATNRP+SI+PALRRPGR DRE+EI         
Sbjct: 124 RRVVATLLTLMDGMAEDDEKEKVFVIAATNRPNSIDPALRRPGRFDRELEI--------- 174

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 +P    R +IL   LS M HSL   ++  L+  THGFVGADL+AL  EAA + +
Sbjct: 175 -----GIPDAVGRKQILEIFLSKMPHSLSSEDIHELAAKTHGFVGADLSALVREAATLAI 229

Query: 645 RRYSKIQTS 653
           +R+    TS
Sbjct: 230 QRWHTSSTS 238



 Score =  181 bits (458), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/226 (45%), Positives = 139/226 (61%), Gaps = 7/226 (3%)

Query: 777 VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASE-AGL 835
           +GG      Q+   +E P KH   +   G +PP GIL++GPPG  KT +ARAVAS   G 
Sbjct: 7   LGGLDSQIRQIRTLLEIPLKHPTTYSLFGLKPPRGILLYGPPGTGKTALARAVASALPGC 66

Query: 836 NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 895
           + + V GPEL S + GE+E+ +R +F +AR  +P ++  DEID L   R  + DG  V  
Sbjct: 67  SCIVVNGPELSSAYHGETEEKLRGVFEEARKKSPCVVVLDEIDALCPKR--DGDGGEVER 124

Query: 896 RVMSQLLVELDGL---HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
           RV++ LL  +DG+    ++  V VIAATNRP+ IDPAL RPGRFDR L +G P+   R++
Sbjct: 125 RVVATLLTLMDGMAEDDEKEKVFVIAATNRPNSIDPALRRPGRFDRELEIGIPDAVGRKQ 184

Query: 953 IFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIE 997
           I  I L K+P S S  +I ELA  + G  GAD+S + REAA  AI+
Sbjct: 185 ILEIFLSKMPHSLSSEDIHELAAKTHGFVGADLSALVREAATLAIQ 230



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 134/238 (56%), Gaps = 28/238 (11%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           + T   LG+   +GVLL+GPPG  KT  A+  A +SG+N   V GPE++++  GESE+A+
Sbjct: 296 RDTFLRLGVEAPRGVLLYGPPGCSKTMTAKALATESGLNFLAVKGPELLNKYVGESERAV 355

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
            EVF  A  +AP+++F DE+DA+  +R D G+     ++ +LLN MDG+    GV ++AA
Sbjct: 356 REVFRKAQAAAPSILFFDEIDALGSSRSD-GDGPHNGVLTSLLNEMDGIVELSGVTIVAA 414

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD ++ AL RPGRLDR + +                P    R EI    L+ M    
Sbjct: 415 TNRPDVLDSALMRPGRLDRILYV--------------GAPDLDARKEIFKLRLAKMA--- 457

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR-----YSKIQTSSDVLHSTGTL 663
           ++  V+ + +A    G  GA++A++C +AAL  +       Y K+   S ++HS  T+
Sbjct: 458 VEPRVDVVELARLAEGCSGAEVASICQDAALTAMNEDLNAPYVKL---SHLVHSAKTV 512


>gi|393216927|gb|EJD02417.1| AAA family ATPase [Fomitiporia mediterranea MF3/22]
          Length = 802

 Score =  305 bits (781), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 143/283 (50%), Positives = 200/283 (70%), Gaps = 4/283 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D  +    V+PSA+R + +EVP V+W ++GGQ  V  +L E VEWP +H EAF R+G + 
Sbjct: 510  DLSEGLKLVQPSALRSITIEVPAVRWNEIGGQAHVAQKLRECVEWPLRHPEAFARLGVKA 569

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPGCSKTL ARA+A+E+G+NFLAVKGPEL +K+VGESE+AVR +F KARA A
Sbjct: 570  PRGVLLYGPPGCSKTLTARALATESGINFLAVKGPELLNKFVGESERAVREIFRKARAAA 629

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSI+FFDEID L   R  +S      + V++ LL E+DG+ + + VT++AATNRPD ID 
Sbjct: 630  PSIVFFDEIDALGTSRSGDSGSGGKHEGVLTTLLNEMDGVQELIGVTIVAATNRPDVIDS 689

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+RPGR DR+LYVGPP+   R EI RI  R +    D+N  ELA L+EGC+GA+++ +C
Sbjct: 690  ALMRPGRLDRILYVGPPDRAGRLEILRIRTRMMSVDPDLNFEELADLTEGCSGAELTALC 749

Query: 989  REAAISAIEENLDASRIT----MQHLKTAIRHVQPSEIHSYKE 1027
            ++AA+  ++EN+DA  +     +Q  KT  R + P  I  +++
Sbjct: 750  QDAALLTMQENIDAPFVPRSAFLQAAKTVRRQITPEIIEKFEQ 792



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/255 (41%), Positives = 153/255 (60%), Gaps = 25/255 (9%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL K+ + ++D+I I  +        GL+P KGVLLHGPPGTGKT LAR     S 
Sbjct: 253 ASVGGLDKQISQIRDLIEIPLTRPDLFRHFGLKPPKGVLLHGPPGTGKTHLARAVVEASI 312

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-----DGGE 524
            ++  V G E+ S  +GE+E+ L +VF  A + +P +V +DE+DA+AP R+      GG 
Sbjct: 313 ASVIVVAGAELSSAYHGETERRLRDVFAEARRKSPCIVVLDEVDALAPRREGSEDASGGG 372

Query: 525 ELSQRMVATLLNLMDGVC-RTDG----VLVIAATNRPDSIEPALRRPGRLDREIEIDMSF 579
           E+ +R+VATLL ++DG+    DG    V+VI  TNRP++I+PALRRPGR DREIEI    
Sbjct: 373 EVEKRVVATLLTILDGIGNEKDGQDERVVVIGTTNRPNAIDPALRRPGRFDREIEI---- 428

Query: 580 LFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
                      +P    R  IL  +LS   HS+ + E+  ++  THG+VGADL+A+  EA
Sbjct: 429 ----------GIPDAEARHAILKVILSTTPHSIPEEELRSIASRTHGYVGADLSAVVREA 478

Query: 640 ALVCLRRYSKIQTSS 654
             + ++RY     SS
Sbjct: 479 GTLAIKRYMHSNESS 493



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/274 (36%), Positives = 149/274 (54%), Gaps = 23/274 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +  +Q+ + +E P    + F+  G +PP G+L+ GPPG  KT +ARAV   +
Sbjct: 252  YASVGGLDKQISQIRDLIEIPLTRPDLFRHFGLKPPKGVLLHGPPGTGKTHLARAVVEAS 311

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKE--SDG 890
              + + V G EL S + GE+E+ +R +FA+AR  +P I+  DE+D LA  R G E  S G
Sbjct: 312  IASVIVVAGAELSSAYHGETERRLRDVFAEARRKSPCIVVLDEVDALAPRREGSEDASGG 371

Query: 891  VSVSDRVMSQLLVELDGL-----HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              V  RV++ LL  LDG+      Q   V VI  TNRP+ IDPAL RPGRFDR + +G P
Sbjct: 372  GEVEKRVVATLLTILDGIGNEKDGQDERVVVIGTTNRPNAIDPALRRPGRFDREIEIGIP 431

Query: 946  NETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR 1004
            +   R  I ++ L   P S  +  +R +A  + G  GAD+S + REA   AI+  + ++ 
Sbjct: 432  DAEARHAILKVILSTTPHSIPEEELRSIASRTHGYVGADLSAVVREAGTLAIKRYMHSNE 491

Query: 1005 --------------ITMQHLKTAIRHVQPSEIHS 1024
                          +T + L   ++ VQPS + S
Sbjct: 492  SSLASTPIDKQSLLLTSEDLSEGLKLVQPSALRS 525



 Score =  147 bits (371), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 125/212 (58%), Gaps = 17/212 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG++  +GVLL+GPPG  KT  AR  A +SG+N   V GPE++++  GESE+A+ E+
Sbjct: 562 FARLGVKAPRGVLLYGPPGCSKTLTARALATESGINFLAVKGPELLNKFVGESERAVREI 621

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQR--MVATLLNLMDGVCRTDGVLVIAAT 553
           F  A  +AP++VF DE+DA+  +R        +   ++ TLLN MDGV    GV ++AAT
Sbjct: 622 FRKARAAAPSIVFFDEIDALGTSRSGDSGSGGKHEGVLTTLLNEMDGVQELIGVTIVAAT 681

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+ AL RPGRLDR           +L   P   P  A RLEIL  + + M     
Sbjct: 682 NRPDVIDSALMRPGRLDR-----------ILYVGP---PDRAGRLEILR-IRTRMMSVDP 726

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           D   E L+  T G  GA+L ALC +AAL+ ++
Sbjct: 727 DLNFEELADLTEGCSGAELTALCQDAALLTMQ 758


>gi|449066850|ref|YP_007433932.1| ATP-dependent Zn protease [Sulfolobus acidocaldarius N8]
 gi|449069122|ref|YP_007436203.1| ATP-dependent Zn protease [Sulfolobus acidocaldarius Ron12/I]
 gi|449035358|gb|AGE70784.1| ATP-dependent Zn protease [Sulfolobus acidocaldarius N8]
 gi|449037630|gb|AGE73055.1| ATP-dependent Zn protease [Sulfolobus acidocaldarius Ron12/I]
          Length = 773

 Score =  305 bits (781), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 140/254 (55%), Positives = 190/254 (74%), Gaps = 1/254 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   ++PS +REV +EVPKV W D+GG   VK QL EAVEWP +  E F 
Sbjct: 448 LKVSMNDFLNALKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFT 507

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           + G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 508 KSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 567

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           KAR  AP++IFFDEID +A IRG  +D   V++R+++QLL E+DG+     V +IAATNR
Sbjct: 568 KARQAAPTVIFFDEIDSIAPIRGLSTDS-GVTERIVNQLLAEMDGIVPLNKVVIIAATNR 626

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +DPALLRPGRFDRL+YV PP++T R EI ++H + +P + DV++ ++A  +EG TGA
Sbjct: 627 PDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGA 686

Query: 983 DISLICREAAISAI 996
           D+  + REA I+A+
Sbjct: 687 DLEALVREATINAM 700



 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/283 (44%), Positives = 180/283 (63%), Gaps = 19/283 (6%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            +++R   ++E  L  PKV WED+G   E K ++ E VEWP +H E F+R+G  PP GIL+
Sbjct: 185  IEIREEPVKESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILL 244

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+ARA+A+E G  F+ V GPE+ SK+ GESE+ +R +F +A  NAPSIIF 
Sbjct: 245  YGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFI 304

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R  E     V  RV++QLL  +DG+  R  V VI ATNRPD IDPAL RPG
Sbjct: 305  DEIDAIAPKR--EDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPG 362

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + + PP+   R++I ++H R +P + DV++ +LA ++ G TGAD++ + +EAAI 
Sbjct: 363  RFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIY 422

Query: 995  AIEE-------NLDAS----------RITMQHLKTAIRHVQPS 1020
            A+         NLD            +++M     A++ +QPS
Sbjct: 423  ALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDFLNALKSIQPS 465



 Score =  207 bits (526), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/212 (50%), Positives = 140/212 (66%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LAR  A++ G    TVNGPE++S+ YGESEQ + E+
Sbjct: 231 FQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREI 290

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A ++AP+++FIDE+DAIAP R+D   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 291 FKEAEENAPSIIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNR 350

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+I+PALRRPGR DREIEI            P   P    R +IL      M  +  D 
Sbjct: 351 PDAIDPALRRPGRFDREIEI-----------RP---PDTKGRKDILQVHTRNMPIT-DDV 395

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +++ L+  T+G+ GADLAAL  EAA+  LRR+
Sbjct: 396 DLDKLAEMTYGYTGADLAALAKEAAIYALRRF 427



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/295 (36%), Positives = 156/295 (52%), Gaps = 34/295 (11%)

Query: 358 SMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLS 417
           ++D  +    I  E KV +   LNA+ KS++   L    +E   V      + + +GGL 
Sbjct: 434 NLDQPTIPAEIIKELKVSMNDFLNAL-KSIQPSLLREVYVEVPKV------NWNDIGGLD 486

Query: 418 KEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVN 476
                L++ +          +  G+ P KG+LL GPPGTGKT LA+  A +SG N   V 
Sbjct: 487 NVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVR 546

Query: 477 GPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVAT 533
           GPE++S+  GESE+A+ E+F  A Q+AP V+F DE+D+IAP R    D G  +++R+V  
Sbjct: 547 GPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG--VTERIVNQ 604

Query: 534 LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAA 590
           LL  MDG+   + V++IAATNRPD ++PAL RPGR DR I +   D +  F +LK     
Sbjct: 605 LLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKN 664

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           VP                     D  +E ++    G+ GADL AL  EA +  +R
Sbjct: 665 VPLAE------------------DVSLEDIAEKAEGYTGADLEALVREATINAMR 701


>gi|312370737|gb|EFR19068.1| hypothetical protein AND_23110 [Anopheles darlingi]
          Length = 682

 Score =  305 bits (781), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 142/269 (52%), Positives = 196/269 (72%), Gaps = 2/269 (0%)

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            A   V+ SAMRE+++E P V+W D+GGQ E+K +L + ++WP  H E F R+G +PP G+
Sbjct: 296  ATQHVKASAMREIMIECPNVRWTDIGGQEELKHKLRQIIDWPIHHPEVFTRLGIKPPRGL 355

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            LMFGPPGCSKT++A+A+A+E+ LNFL++KG ELFS WVGESE+AVR LF +AR  APSII
Sbjct: 356  LMFGPPGCSKTMIAKAIATESRLNFLSIKGSELFSMWVGESERAVRDLFRRARQVAPSII 415

Query: 873  FFDEIDGL--AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            FFDEID +         S G SV +RV++QLL E+DG+    +V ++AATNRPD ID AL
Sbjct: 416  FFDEIDAIGGERSGDGGSGGSSVKERVLAQLLTEMDGVSVLKDVRIVAATNRPDLIDRAL 475

Query: 931  LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICRE 990
            +RPGR DR++YV  P+E  REEIFRI L+ IP ++DV+++EL   S GC+G++I  IC+E
Sbjct: 476  MRPGRLDRIVYVRLPDEAAREEIFRIKLKTIPTAADVDLQELVRRSVGCSGSEIEAICQE 535

Query: 991  AAISAIEENLDASRITMQHLKTAIRHVQP 1019
            AA+  +E + D   I   H + A++ V+P
Sbjct: 536  AALRGLEGSFDVQTINWSHFEHALQLVRP 564



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 124/222 (55%), Gaps = 19/222 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
             + LG++P +G+L+ GPPG  KT +A+  A +S +N  ++ G E+ S   GESE+A+ +
Sbjct: 343 VFTRLGIKPPRGLLMFGPPGCSKTMIAKAIATESRLNFLSIKGSELFSMWVGESERAVRD 402

Query: 495 VFDSASQSAPAVVFIDELDAI----APARKDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           +F  A Q AP+++F DE+DAI    +     GG  + +R++A LL  MDGV     V ++
Sbjct: 403 LFRRARQVAPSIIFFDEIDAIGGERSGDGGSGGSSVKERVLAQLLTEMDGVSVLKDVRIV 462

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNRPD I+ AL RPGRLDR + + +              P  A R EI    L  +  
Sbjct: 463 AATNRPDLIDRALMRPGRLDRIVYVRL--------------PDEAAREEIFRIKLKTIP- 507

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQT 652
           +  D +++ L   + G  G+++ A+C EAAL  L     +QT
Sbjct: 508 TAADVDLQELVRRSVGCSGSEIEAICQEAALRGLEGSFDVQT 549



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 123/260 (47%), Gaps = 33/260 (12%)

Query: 391 TLPNAQIE---FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGV 447
            L NAQ+E    QN +  +E+ I  L G+  E   L D       +     +    ++GV
Sbjct: 43  VLDNAQMEQEIHQNQRYALER-IGALDGIITELRTLMDAAFGIETRKRHGPI----SRGV 97

Query: 448 LLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESE----QALHEVFDSASQSA 503
           LL+G  G GKT L    A     ++  +N  EV S+ YGESE    +   EVF+      
Sbjct: 98  LLYGVSGVGKTMLVNALAAHYRCHVVRLNCSEVYSKFYGESEANVSRQFSEVFEV--HPK 155

Query: 504 PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV---CRTDGVLVIAATNRPDSIE 560
           PA+V ++EL  + P  K    ++ +R+    LNL+D +    R +  LVI  T+  D++ 
Sbjct: 156 PALVIVEELHNLCP--KASSSDIGKRISQHFLNLLDSLHSSARGNRSLVIGTTDNVDNVN 213

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
             LRR GRLD E E+               VP  A R  IL  +LS   HSL   E+  +
Sbjct: 214 ALLRRGGRLDYEFEL--------------PVPDAAGRESILQRVLSRATHSLSSEEIRSI 259

Query: 621 SMATHGFVGADLAALCNEAA 640
           +  THG+VGADL  L   AA
Sbjct: 260 ARITHGYVGADLENLLANAA 279



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 16/217 (7%)

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN--A 868
            G+L++G  G  KT++  A+A+    + + +   E++SK+ GESE  V   F++       
Sbjct: 96   GVLLYGVSGVGKTMLVNALAAHYRCHVVRLNCSEVYSKFYGESEANVSRQFSEVFEVHPK 155

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ--RVNVT-VIAATNRPDK 925
            P+++  +E+  L   +   SD   +  R+    L  LD LH   R N + VI  T+  D 
Sbjct: 156  PALVIVEELHNLCP-KASSSD---IGKRISQHFLNLLDSLHSSARGNRSLVIGTTDNVDN 211

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIF-RIHLRKIPCSSDVNIRELACLSEGCTGADI 984
            ++  L R GR D    +  P+   RE I  R+  R     S   IR +A ++ G  GAD+
Sbjct: 212  VNALLRRGGRLDYEFELPVPDAAGRESILQRVLSRATHSLSSEEIRSIARITHGYVGADL 271

Query: 985  -SLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
             +L+   A  +A      +S I  Q L TA +HV+ S
Sbjct: 272  ENLLANAAGGTA-----GSSMIDSQALLTATQHVKAS 303


>gi|268567115|ref|XP_002639894.1| C. briggsae CBR-CDC-48.3 protein [Caenorhabditis briggsae]
          Length = 721

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 142/266 (53%), Positives = 193/266 (72%), Gaps = 2/266 (0%)

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            AR ++RP+ +R+ ILEVP V W D+GG  E+K ++ +AV WPQKH EAF+R G  PP GI
Sbjct: 434  ARKRIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGI 493

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L++GPPGCSKTL+ARA+A+EA +NFLAVKGPELFSKWVG+SEKA+R LF +AR  AP+I+
Sbjct: 494  LLYGPPGCSKTLIARALANEAKMNFLAVKGPELFSKWVGDSEKAIRDLFTRARQVAPTIV 553

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLR 932
            FFDEID + + RG E     VSDRV++QLL ELDGL +   V ++AATNRPD++D ALLR
Sbjct: 554  FFDEIDAVGSSRGSEKSS-GVSDRVLAQLLTELDGLEKSSRVVLLAATNRPDQLDSALLR 612

Query: 933  PGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS-DVNIRELACLSEGCTGADISLICREA 991
            PGR DR +YVG P E  R  I ++  RK+        I++L   + G +GA++  +CR A
Sbjct: 613  PGRLDRAIYVGLPCEETRRAILKMRTRKMAIDDVTATIQKLVEKTSGYSGAELVAVCRTA 672

Query: 992  AISAIEENLDASRITMQHLKTAIRHV 1017
            A+ A+ EN++A+ +  +H + A+  V
Sbjct: 673  AMFAMRENIEANIVEWKHFEDALTAV 698



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 122/210 (58%), Gaps = 19/210 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G+ P  G+LL+GPPG  KT +AR  A+++ +N   V GPE+ S+  G+SE+A+ ++F  
Sbjct: 485 FGIDPPAGILLYGPPGCSKTLIARALANEAKMNFLAVKGPELFSKWVGDSEKAIRDLFTR 544

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEE---LSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q AP +VF DE+DA+  +R  G E+   +S R++A LL  +DG+ ++  V+++AATNR
Sbjct: 545 ARQVAPTIVFFDEIDAVGSSR--GSEKSSGVSDRVLAQLLTELDGLEKSSRVVLLAATNR 602

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD ++ AL RPGRLDR I + +              P    R  IL      M    + +
Sbjct: 603 PDQLDSALLRPGRLDRAIYVGL--------------PCEETRRAILKMRTRKMAIDDVTA 648

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLR 645
            ++ L   T G+ GA+L A+C  AA+  +R
Sbjct: 649 TIQKLVEKTSGYSGAELVAVCRTAAMFAMR 678


>gi|403341369|gb|EJY69989.1| ATPase, AAA family protein [Oxytricha trifallax]
          Length = 648

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 137/276 (49%), Positives = 207/276 (75%), Gaps = 9/276 (3%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
             E++ +  +P +++++I+EVPK KW+++GG  ++K Q+ + VEWP KH + F+ +  +PP
Sbjct: 352  LEQSIIDAKPLSIQDLIVEVPKTKWDEIGGNEDIKFQVKQCVEWPLKHHKKFQLMNLKPP 411

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             GIL++GPPGCSKT++A+A+A+E+GLNF+A+KGPELFSK+VG++EKA+R +F KAR ++P
Sbjct: 412  AGILLYGPPGCSKTMIAKALATESGLNFIAIKGPELFSKYVGDTEKAIREIFRKARLSSP 471

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
            SIIFFDEID +A  RG  +D  SVSDR + QLL E+DG+  R  V V+AATNR D ID A
Sbjct: 472  SIIFFDEIDAMATQRG--NDETSVSDRALCQLLNEMDGVESRAQVIVVAATNRLDIIDTA 529

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            LLRPGRFDRL+YV  P++  RE+I RI++ K+  S D++  +LA  ++G +GA+I+LICR
Sbjct: 530  LLRPGRFDRLIYVPLPSQQAREQILRINVGKMQKSDDIDYEKLARETDGMSGAEIALICR 589

Query: 990  EAAISAIEENLDASR-------ITMQHLKTAIRHVQ 1018
            EA + A+ ++++  +       +T QHL+ A+  V+
Sbjct: 590  EAGLKALTQDMNIEKEDGELIQVTHQHLEQALYEVK 625



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 120/206 (58%), Gaps = 15/206 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           + L+P  G+LL+GPPG  KT +A+  A +SG+N   + GPE+ S+  G++E+A+ E+F  
Sbjct: 406 MNLKPPAGILLYGPPGCSKTMIAKALATESGLNFIAIKGPELFSKYVGDTEKAIREIFRK 465

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A  S+P+++F DE+DA+A  R +    +S R +  LLN MDGV     V+V+AATNR D 
Sbjct: 466 ARLSSPSIIFFDEIDAMATQRGNDETSVSDRALCQLLNEMDGVESRAQVIVVAATNRLDI 525

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           I+ AL RPGR DR I +               +PS   R +IL   +  M+ S  D + E
Sbjct: 526 IDTALLRPGRFDRLIYV--------------PLPSQQAREQILRINVGKMQKS-DDIDYE 570

Query: 619 YLSMATHGFVGADLAALCNEAALVCL 644
            L+  T G  GA++A +C EA L  L
Sbjct: 571 KLARETDGMSGAEIALICREAGLKAL 596



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 27/248 (10%)

Query: 401 NVQATVEQDIS-KLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTS 459
           N+Q + + D + + GG   +  +LK++I     K   S + +   KGVLLHGP G GKT 
Sbjct: 118 NLQDSKDNDGNVQFGGFQNQIELLKEVIELKLFKEE-SKVNI---KGVLLHGPSGIGKTM 173

Query: 460 LARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR 519
             +       ++   +    ++    G+ +Q L + F       P+V+ I+ELD I  A+
Sbjct: 174 GLKHVLSQYQIHKIQITPKHLIQAQQGQVKQ-LQDSFKLLKLRQPSVLIIEELDFIGSAK 232

Query: 520 KDGGEELSQRMVATLLNLMDGV-CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
               +     +     + +D +    D +L+IA TN+ D ++ +LRR GRLD +I  DM 
Sbjct: 233 ASNKD-----LFYAFQSELDSIDSLNDKILIIATTNKLDELDKSLRRGGRLDIDIRFDM- 286

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD-SEVEYLSMATHGFVGADLAALCN 637
                        PS   R EIL + L  + +  +D +++E ++ A  GFV +DLA +  
Sbjct: 287 -------------PSAEDRYEILKSHLQQIPNVQIDNNQLEIIARAASGFVSSDLAQIVR 333

Query: 638 EAALVCLR 645
              +  L+
Sbjct: 334 NTQIQSLK 341



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 11/215 (5%)

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            G+L+ GP G  KT+  + V S+  ++ + +    L     G+  K ++  F   +   PS
Sbjct: 160  GVLLHGPSGIGKTMGLKHVLSQYQIHKIQITPKHLIQAQQGQV-KQLQDSFKLLKLRQPS 218

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            ++  +E+D + + +    D            L  +D L+ ++   +IA TN+ D++D +L
Sbjct: 219  VLIIEELDFIGSAKASNKDLFYA----FQSELDSIDSLNDKI--LIIATTNKLDELDKSL 272

Query: 931  LRPGRFDRLLYVGPPNETDREEIFRIHLRKIP-CSSDVNIRE-LACLSEGCTGADISLIC 988
             R GR D  +    P+  DR EI + HL++IP    D N  E +A  + G   +D++ I 
Sbjct: 273  RRGGRLDIDIRFDMPSAEDRYEILKSHLQQIPNVQIDNNQLEIIARAASGFVSSDLAQIV 332

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIH 1023
            R   I +++ N     IT + L+ +I   +P  I 
Sbjct: 333  RNTQIQSLKFN--EGVITKKQLEQSIIDAKPLSIQ 365


>gi|170579214|ref|XP_001894730.1| ATPase, AAA family protein [Brugia malayi]
 gi|158598563|gb|EDP36432.1| ATPase, AAA family protein [Brugia malayi]
          Length = 700

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 139/285 (48%), Positives = 208/285 (72%), Gaps = 5/285 (1%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A  +V P+ +R+ +L+VP V WED+GG RE+K ++ +A+ WP ++ E FKR  ++PP
Sbjct: 410  FDIALKRVHPTGIRQFVLQVPDVNWEDIGGNRELKMKIEQAILWPYRYPEIFKRFASKPP 469

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
            +GIL++GPPGCSKTL+ARA+AS++ +NFLAVKGPELFSKWVGESE+AVR LF +AR  AP
Sbjct: 470  SGILLYGPPGCSKTLIARAIASQSRMNFLAVKGPELFSKWVGESERAVRELFRRARQVAP 529

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
            +IIFFDEID + A RG  ++   V +RV++QLL ELDGL ++ +V V+AATNRPD++D A
Sbjct: 530  AIIFFDEIDAVGANRGDRNES-HVGERVLTQLLTELDGLEEKGDVMVLAATNRPDRLDSA 588

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            LLRPGRF+  ++V  P+E  R EI RI L ++  + D+++ +++  +EG +GA++  +C 
Sbjct: 589  LLRPGRFNLTIHVPLPDEETRLEILRIRLNQMQVTIDLDVEDISKRTEGFSGAEVVELCD 648

Query: 990  EAAISAIEENLDASRITMQHLKTAIRHVQPSE----IHSYKELSA 1030
            +A   A+ EN DA+R+  +H   A++ + P      ++ YKE  +
Sbjct: 649  QAVREALLENRDANRLEFRHFHQALKEIMPRTPNWLLNIYKEFKS 693



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 16/200 (8%)

Query: 442 RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
           +P  G+LL+GPPG  KT +AR  A  S +N   V GPE+ S+  GESE+A+ E+F  A Q
Sbjct: 467 KPPSGILLYGPPGCSKTLIARAIASQSRMNFLAVKGPELFSKWVGESERAVRELFRRARQ 526

Query: 502 SAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
            APA++F DE+DA+   R D  E  + +R++  LL  +DG+     V+V+AATNRPD ++
Sbjct: 527 VAPAIIFFDEIDAVGANRGDRNESHVGERVLTQLLTELDGLEEKGDVMVLAATNRPDRLD 586

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
            AL RPGR +  I + +              P    RLEIL   L+ M+ + +D +VE +
Sbjct: 587 SALLRPGRFNLTIHVPL--------------PDEETRLEILRIRLNQMQVT-IDLDVEDI 631

Query: 621 SMATHGFVGADLAALCNEAA 640
           S  T GF GA++  LC++A 
Sbjct: 632 SKRTEGFSGAEVVELCDQAV 651


>gi|70606628|ref|YP_255498.1| ATP-dependent Zn protease [Sulfolobus acidocaldarius DSM 639]
 gi|68567276|gb|AAY80205.1| ATP-dependent Zn protease [Sulfolobus acidocaldarius DSM 639]
          Length = 747

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 140/254 (55%), Positives = 190/254 (74%), Gaps = 1/254 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   ++PS +REV +EVPKV W D+GG   VK QL EAVEWP +  E F 
Sbjct: 422 LKVSMNDFLNALKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFT 481

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           + G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 482 KSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 541

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           KAR  AP++IFFDEID +A IRG  +D   V++R+++QLL E+DG+     V +IAATNR
Sbjct: 542 KARQAAPTVIFFDEIDSIAPIRGLSTDS-GVTERIVNQLLAEMDGIVPLNKVVIIAATNR 600

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +DPALLRPGRFDRL+YV PP++T R EI ++H + +P + DV++ ++A  +EG TGA
Sbjct: 601 PDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGA 660

Query: 983 DISLICREAAISAI 996
           D+  + REA I+A+
Sbjct: 661 DLEALVREATINAM 674



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/283 (44%), Positives = 180/283 (63%), Gaps = 19/283 (6%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            +++R   ++E  L  PKV WED+G   E K ++ E VEWP +H E F+R+G  PP GIL+
Sbjct: 159  IEIREEPVKESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILL 218

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+ARA+A+E G  F+ V GPE+ SK+ GESE+ +R +F +A  NAPSIIF 
Sbjct: 219  YGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFI 278

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R  E     V  RV++QLL  +DG+  R  V VI ATNRPD IDPAL RPG
Sbjct: 279  DEIDAIAPKR--EDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPG 336

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + + PP+   R++I ++H R +P + DV++ +LA ++ G TGAD++ + +EAAI 
Sbjct: 337  RFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIY 396

Query: 995  AIEE-------NLDAS----------RITMQHLKTAIRHVQPS 1020
            A+         NLD            +++M     A++ +QPS
Sbjct: 397  ALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDFLNALKSIQPS 439



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 139/212 (65%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LAR  A++ G    TVNGPE++S+ YGESEQ + E+
Sbjct: 205 FQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREI 264

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A ++AP+++FIDE+DAIAP R+D   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 265 FKEAEENAPSIIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNR 324

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+I+PALRRPGR DREIEI                P    R +IL      M  +  D 
Sbjct: 325 PDAIDPALRRPGRFDREIEI--------------RPPDTKGRKDILQVHTRNMPIT-DDV 369

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +++ L+  T+G+ GADLAAL  EAA+  LRR+
Sbjct: 370 DLDKLAEMTYGYTGADLAALAKEAAIYALRRF 401



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/295 (36%), Positives = 156/295 (52%), Gaps = 34/295 (11%)

Query: 358 SMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLS 417
           ++D  +    I  E KV +   LNA+ KS++   L    +E   V      + + +GGL 
Sbjct: 408 NLDQPTIPAEIIKELKVSMNDFLNAL-KSIQPSLLREVYVEVPKV------NWNDIGGLD 460

Query: 418 KEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVN 476
                L++ +          +  G+ P KG+LL GPPGTGKT LA+  A +SG N   V 
Sbjct: 461 NVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVR 520

Query: 477 GPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVAT 533
           GPE++S+  GESE+A+ E+F  A Q+AP V+F DE+D+IAP R    D G  +++R+V  
Sbjct: 521 GPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG--VTERIVNQ 578

Query: 534 LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAA 590
           LL  MDG+   + V++IAATNRPD ++PAL RPGR DR I +   D +  F +LK     
Sbjct: 579 LLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKN 638

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           VP                     D  +E ++    G+ GADL AL  EA +  +R
Sbjct: 639 VPLAE------------------DVSLEDIAEKAEGYTGADLEALVREATINAMR 675


>gi|73920780|sp|Q07590.2|SAV_SULAC RecName: Full=Protein SAV
          Length = 780

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 140/254 (55%), Positives = 190/254 (74%), Gaps = 1/254 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   ++PS +REV +EVPKV W D+GG   VK QL EAVEWP +  E F 
Sbjct: 455 LKVSMNDFLNALKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFT 514

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           + G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 515 KSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 574

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           KAR  AP++IFFDEID +A IRG  +D   V++R+++QLL E+DG+     V +IAATNR
Sbjct: 575 KARQAAPTVIFFDEIDSIAPIRGLSTDS-GVTERIVNQLLAEMDGIVPLNKVVIIAATNR 633

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +DPALLRPGRFDRL+YV PP++T R EI ++H + +P + DV++ ++A  +EG TGA
Sbjct: 634 PDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGA 693

Query: 983 DISLICREAAISAI 996
           D+  + REA I+A+
Sbjct: 694 DLEALVREATINAM 707



 Score =  257 bits (656), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/283 (44%), Positives = 180/283 (63%), Gaps = 19/283 (6%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            +++R   ++E  L  PKV WED+G   E K ++ E VEWP +H E F+R+G  PP GIL+
Sbjct: 192  IEIREEPVKESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILL 251

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+ARA+A+E G  F+ V GPE+ SK+ GESE+ +R +F +A  NAPSIIF 
Sbjct: 252  YGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFI 311

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R  E     V  RV++QLL  +DG+  R  V VI ATNRPD IDPAL RPG
Sbjct: 312  DEIDAIAPKR--EDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPG 369

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + + PP+   R++I ++H R +P + DV++ +LA ++ G TGAD++ + +EAAI 
Sbjct: 370  RFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIY 429

Query: 995  AIEE-------NLDAS----------RITMQHLKTAIRHVQPS 1020
            A+         NLD            +++M     A++ +QPS
Sbjct: 430  ALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDFLNALKSIQPS 472



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/212 (50%), Positives = 140/212 (66%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LAR  A++ G    TVNGPE++S+ YGESEQ + E+
Sbjct: 238 FQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREI 297

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A ++AP+++FIDE+DAIAP R+D   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 298 FKEAEENAPSIIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNR 357

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+I+PALRRPGR DREIEI            P   P    R +IL      M  +  D 
Sbjct: 358 PDAIDPALRRPGRFDREIEI-----------RP---PDTKGRKDILQVHTRNMPIT-DDV 402

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +++ L+  T+G+ GADLAAL  EAA+  LRR+
Sbjct: 403 DLDKLAEMTYGYTGADLAALAKEAAIYALRRF 434



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/295 (36%), Positives = 156/295 (52%), Gaps = 34/295 (11%)

Query: 358 SMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLS 417
           ++D  +    I  E KV +   LNA+ KS++   L    +E   V      + + +GGL 
Sbjct: 441 NLDQPTIPAEIIKELKVSMNDFLNAL-KSIQPSLLREVYVEVPKV------NWNDIGGLD 493

Query: 418 KEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVN 476
                L++ +          +  G+ P KG+LL GPPGTGKT LA+  A +SG N   V 
Sbjct: 494 NVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVR 553

Query: 477 GPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVAT 533
           GPE++S+  GESE+A+ E+F  A Q+AP V+F DE+D+IAP R    D G  +++R+V  
Sbjct: 554 GPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG--VTERIVNQ 611

Query: 534 LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAA 590
           LL  MDG+   + V++IAATNRPD ++PAL RPGR DR I +   D +  F +LK     
Sbjct: 612 LLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKN 671

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           VP                     D  +E ++    G+ GADL AL  EA +  +R
Sbjct: 672 VPLAE------------------DVSLEDIAEKAEGYTGADLEALVREATINAMR 708


>gi|17508053|ref|NP_492211.1| Protein CDC-48.3 [Caenorhabditis elegans]
 gi|3878262|emb|CAB00040.1| Protein CDC-48.3 [Caenorhabditis elegans]
          Length = 724

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 143/266 (53%), Positives = 192/266 (72%), Gaps = 2/266 (0%)

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            AR ++RP+ +R+ ILEVP V W D+GG  E+K ++ +AV WPQKH EAF+R G  PP GI
Sbjct: 437  ARKRIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGI 496

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L++GPPGCSKTL+ARA+ASEA +NFLAVKGPELFSKWVG+SEKA+R LF++AR  AP+I+
Sbjct: 497  LLYGPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIV 556

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLR 932
            FFDEID + + RG E     VSDRV++QLL ELDGL +   V ++AATNRPD++D ALLR
Sbjct: 557  FFDEIDAVGSSRGSEKSS-GVSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLR 615

Query: 933  PGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDV-NIRELACLSEGCTGADISLICREA 991
            PGR DR +YVG P E  R  I  +  +K+     V  I +L   + G +GA++  +CR A
Sbjct: 616  PGRLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTA 675

Query: 992  AISAIEENLDASRITMQHLKTAIRHV 1017
            A+ A+ E++DA+ +   H + A+  V
Sbjct: 676  AMFAMRESIDATIVQWTHFEQALAAV 701



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 19/210 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G+ P  G+LL+GPPG  KT +AR  A ++ +N   V GPE+ S+  G+SE+A+ ++F  
Sbjct: 488 FGIDPPAGILLYGPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSR 547

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEE---LSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A Q AP +VF DE+DA+  +R  G E+   +S R++A LL  +DG+ ++  V+++AATNR
Sbjct: 548 ARQVAPTIVFFDEIDAVGSSR--GSEKSSGVSDRVLAQLLTELDGLEKSSRVILLAATNR 605

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD ++ AL RPGRLDR I + +              P    R  IL      M+      
Sbjct: 606 PDQLDSALLRPGRLDRAIYVGL--------------PCEVTRRAILEMRTKKMKFDDTVR 651

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLR 645
            ++ L   T G+ GA+L A+C  AA+  +R
Sbjct: 652 TIDKLVEKTSGYSGAELVAVCRTAAMFAMR 681


>gi|408403151|ref|YP_006861134.1| AAA ATPase [Candidatus Nitrososphaera gargensis Ga9.2]
 gi|408363747|gb|AFU57477.1| AAA family ATPase, CDC48 subfamily [Candidatus Nitrososphaera
            gargensis Ga9.2]
          Length = 725

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 144/283 (50%), Positives = 201/283 (71%), Gaps = 7/283 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+   DFE+A   V+PSAMREV+++ P VKWED+GG  +VK +L EA+EWP KH + F 
Sbjct: 421  IKVTRQDFEEALRDVQPSAMREVLVQKPNVKWEDIGGLGQVKEELAEAIEWPLKHADLFT 480

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
                RPP GIL++GPPG  KT++A+AVA+ +  NF+++KGPEL SKWVGESEK VR +F 
Sbjct: 481  EADVRPPKGILLYGPPGTGKTMIAKAVATTSEANFISIKGPELISKWVGESEKGVREVFR 540

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP ++FFDE+D +A  RG       V++RV+SQ+L E+DGL     V VI ATNR
Sbjct: 541  KARQAAPCVVFFDELDAIAPRRGGSEGDSHVTERVISQMLTEMDGLEDLKGVVVIGATNR 600

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGRFDR+L V  P++  R++IF++H R+ P  SDVN+ +L  ++EG TGA
Sbjct: 601  PDIIDEALLRPGRFDRILEVPIPDKETRKQIFQVHTRRKPLDSDVNLDKLVEMTEGMTGA 660

Query: 983  DISLICREAAISAIEENLDAS-------RITMQHLKTAIRHVQ 1018
            DI+ I   AA+SAI+E++ +        RI+M+H ++A+  ++
Sbjct: 661  DIASIVNAAAMSAIKEHVSSKNGGNKKLRISMKHFESAMDKIK 703



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 122/267 (45%), Positives = 171/267 (64%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP+V +ED+GG R    ++ E +E P +H E F+RIG   P G+L+ GPPG  KTL+A+A
Sbjct: 174  VPRVSYEDIGGLRNEVQKVREMIELPLRHPEIFERIGIEAPKGVLLHGPPGTGKTLLAKA 233

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E    F ++ GPE+ SK+ GESE+ +R +F +A  NAPSIIF DEID +A  R +E 
Sbjct: 234  VANETNAGFYSIGGPEIMSKFYGESEERLRQIFKEAEENAPSIIFIDEIDSIAPKR-EEV 292

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV+SQLL  +DG+  R  + VI ATNRP+ IDPAL RPGRFDR + +G P+E 
Sbjct: 293  SG-DVEKRVVSQLLTLMDGIKSRGKLVVIGATNRPNAIDPALRRPGRFDREIEIGIPDEQ 351

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDAS 1003
             R EI +IH R +P + DV++  +A ++ G  GAD+  + +EAA+ ++     E NL+ +
Sbjct: 352  GRLEILQIHTRGMPLTEDVDLAAIARVTHGFVGADLEALSKEAAMRSLRRILPEINLEEA 411

Query: 1004 RI----------TMQHLKTAIRHVQPS 1020
            RI          T Q  + A+R VQPS
Sbjct: 412  RIPAEILNKIKVTRQDFEEALRDVQPS 438



 Score =  201 bits (510), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          +G+   KGVLLHGPPGTGKT LA+  A+++   
Sbjct: 182 IGGLRNEVQKVREMIELPLRHPEIFERIGIEAPKGVLLHGPPGTGKTLLAKAVANETNAG 241

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            +++ GPE++S+ YGESE+ L ++F  A ++AP+++FIDE+D+IAP R++   ++ +R+V
Sbjct: 242 FYSIGGPEIMSKFYGESEERLRQIFKEAEENAPSIIFIDEIDSIAPKREEVSGDVEKRVV 301

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     ++VI ATNRP++I+PALRRPGR DREIEI               +
Sbjct: 302 SQLLTLMDGIKSRGKLVVIGATNRPNAIDPALRRPGRFDREIEI--------------GI 347

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    RLEIL     GM  +  D ++  ++  THGFVGADL AL  EAA+  LRR
Sbjct: 348 PDEQGRLEILQIHTRGMPLT-EDVDLAAIARVTHGFVGADLEALSKEAAMRSLRR 401



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 138/244 (56%), Gaps = 23/244 (9%)

Query: 408 QDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           +DI  LG + +E A   +  +  +     +   +RP KG+LL+GPPGTGKT +A+  A  
Sbjct: 453 EDIGGLGQVKEELAEAIEWPLKHA--DLFTEADVRPPKGILLYGPPGTGKTMIAKAVATT 510

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEE 525
           S  N  ++ GPE++S+  GESE+ + EVF  A Q+AP VVF DELDAIAP R   +G   
Sbjct: 511 SEANFISIKGPELISKWVGESEKGVREVFRKARQAAPCVVFFDELDAIAPRRGGSEGDSH 570

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +++R+++ +L  MDG+    GV+VI ATNRPD I+ AL RPGR DR +E+          
Sbjct: 571 VTERVISQMLTEMDGLEDLKGVVVIGATNRPDIIDEALLRPGRFDRILEV---------- 620

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGFVGADLAALCNEAALVC 643
                +P    R +I            LDS+V  + L   T G  GAD+A++ N AA+  
Sbjct: 621 ----PIPDKETRKQIFQV---HTRRKPLDSDVNLDKLVEMTEGMTGADIASIVNAAAMSA 673

Query: 644 LRRY 647
           ++ +
Sbjct: 674 IKEH 677


>gi|310600|gb|AAA72002.1| ATPase [Sulfolobus acidocaldarius]
          Length = 780

 Score =  304 bits (779), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 140/254 (55%), Positives = 190/254 (74%), Gaps = 1/254 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   ++PS +REV +EVPKV W D+GG   VK QL EAVEWP +  E F 
Sbjct: 455 LKVSMNDFLNALKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFT 514

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           + G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 515 KSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 574

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           KAR  AP++IFFDEID +A IRG  +D   V++R+++QLL E+DG+     V +IAATNR
Sbjct: 575 KARQAAPTVIFFDEIDSIAPIRGLSTDS-GVTERIVNQLLAEMDGIVPLNKVVIIAATNR 633

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD +DPALLRPGRFDRL+YV PP++T R EI ++H + +P + DV++ ++A  +EG TGA
Sbjct: 634 PDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGA 693

Query: 983 DISLICREAAISAI 996
           D+  + REA I+A+
Sbjct: 694 DLEALVREATINAM 707



 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 126/283 (44%), Positives = 179/283 (63%), Gaps = 19/283 (6%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            +++R   ++E  L  PKV WED+G   E K ++ E VEWP +H E F+R+G  PP GIL+
Sbjct: 192  IEIREEPVKESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILL 251

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+ARA+ +E G  F+ V GPE+ SK+ GESE+ +R +F +A  NAPSIIF 
Sbjct: 252  YGPPGTGKTLLARALRNEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFI 311

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R  E     V  RV++QLL  +DG+  R  V VI ATNRPD IDPAL RPG
Sbjct: 312  DEIDAIAPKR--EDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPG 369

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + + PP+   R++I ++H R +P + DV++ +LA ++ G TGAD++ + +EAAI 
Sbjct: 370  RFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIY 429

Query: 995  AIEE-------NLDAS----------RITMQHLKTAIRHVQPS 1020
            A+         NLD            +++M     A++ +QPS
Sbjct: 430  ALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDFLNALKSIQPS 472



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 139/212 (65%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPGTGKT LAR   ++ G    TVNGPE++S+ YGESEQ + E+
Sbjct: 238 FQRLGIDPPKGILLYGPPGTGKTLLARALRNEIGAYFITVNGPEIMSKFYGESEQRIREI 297

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A ++AP+++FIDE+DAIAP R+D   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 298 FKEAEENAPSIIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNR 357

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+I+PALRRPGR DREIEI            P   P    R +IL      M  +  D 
Sbjct: 358 PDAIDPALRRPGRFDREIEI-----------RP---PDTKGRKDILQVHTRNMPIT-DDV 402

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +++ L+  T+G+ GADLAAL  EAA+  LRR+
Sbjct: 403 DLDKLAEMTYGYTGADLAALAKEAAIYALRRF 434



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/295 (36%), Positives = 156/295 (52%), Gaps = 34/295 (11%)

Query: 358 SMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLS 417
           ++D  +    I  E KV +   LNA+ KS++   L    +E   V      + + +GGL 
Sbjct: 441 NLDQPTIPAEIIKELKVSMNDFLNAL-KSIQPSLLREVYVEVPKV------NWNDIGGLD 493

Query: 418 KEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVN 476
                L++ +          +  G+ P KG+LL GPPGTGKT LA+  A +SG N   V 
Sbjct: 494 NVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVR 553

Query: 477 GPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVAT 533
           GPE++S+  GESE+A+ E+F  A Q+AP V+F DE+D+IAP R    D G  +++R+V  
Sbjct: 554 GPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG--VTERIVNQ 611

Query: 534 LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAA 590
           LL  MDG+   + V++IAATNRPD ++PAL RPGR DR I +   D +  F +LK     
Sbjct: 612 LLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKN 671

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           VP                     D  +E ++    G+ GADL AL  EA +  +R
Sbjct: 672 VPLAE------------------DVSLEDIAEKAEGYTGADLEALVREATINAMR 708


>gi|321261137|ref|XP_003195288.1| peroxisome biosynthesis protein PAS1 (Peroxin-1) [Cryptococcus gattii
            WM276]
 gi|317461761|gb|ADV23501.1| Peroxisome biosynthesis protein PAS1 (Peroxin-1), putative
            [Cryptococcus gattii WM276]
          Length = 803

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 144/284 (50%), Positives = 204/284 (71%), Gaps = 8/284 (2%)

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            VD       +RPSAMREV +E P V+W D+GGQ++VK +L E +EWP  H++ FKR+G  
Sbjct: 514  VDILSTLPSIRPSAMREVFVETPTVRWSDIGGQQDVKQKLKECIEWPLMHRDTFKRLGVE 573

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
             P G+L++GPPGCSKT+ A+A+A+E+G+NF+AVKGPEL +K+VGESE+AVR +F KARA 
Sbjct: 574  APRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAVREIFRKARAA 633

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            +PSIIFFDEID L + R   SD  ++S  V++ LL E+DG+ +   VTV+AATNRPD +D
Sbjct: 634  SPSIIFFDEIDALGSAR---SDDHTLSG-VLTSLLNEMDGVEELSGVTVVAATNRPDVLD 689

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLI 987
             AL+RPGR DR+LYVG P+   R++IFRI +  +     VN+ +LA ++EGC+GA+I  +
Sbjct: 690  SALMRPGRLDRILYVGAPDFETRKDIFRIRMATMAVEPGVNVEQLAEITEGCSGAEIVSV 749

Query: 988  CREAAISAIEENLDASRITMQHL----KTAIRHVQPSEIHSYKE 1027
            C++AA++A+ E+LDA  +   HL     T  R + P  I  ++E
Sbjct: 750  CQDAALAAMNESLDAPYVKGSHLVNSAHTVRRRITPDMIAFFEE 793



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/242 (45%), Positives = 149/242 (61%), Gaps = 22/242 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGGL  +   +K ++ +           GL P +G+LLHGPPGTGKT+LAR  A  +G +
Sbjct: 272 LGGLQSQIDQIKTLLDLPMHHPDLYIRFGLNPPRGILLHGPPGTGKTALARAVASSAGCS 331

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE--ELSQR 529
              VNGPE+ S  +GE+E+ L  VF  A + +P +V +DE+DA+ P R+DGGE  E+ +R
Sbjct: 332 CIVVNGPELSSAYHGETEERLRGVFTEARKRSPCIVVLDEVDALCP-RRDGGEGGEVERR 390

Query: 530 MVATLLNLMDGVCRT----DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +VATLL LMDG+       + V V+AATNRP+SI+PALRRPGR DREIEI          
Sbjct: 391 VVATLLTLMDGMSHESLEGERVFVVAATNRPNSIDPALRRPGRFDREIEI---------- 440

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                VP    R EIL  +LS + HSL + ++  L+  THG+VGADL +L  E+A   + 
Sbjct: 441 ----GVPDVKGRREILDIMLSKIPHSLSEGDLSSLAARTHGYVGADLFSLVRESASAAIS 496

Query: 646 RY 647
           R+
Sbjct: 497 RF 498



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 141/234 (60%), Gaps = 6/234 (2%)

Query: 768 EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
           E P   +  +GG +    Q+   ++ P  H + + R G  PP GIL+ GPPG  KT +AR
Sbjct: 263 ESPVSAYTFLGGLQSQIDQIKTLLDLPMHHPDLYIRFGLNPPRGILLHGPPGTGKTALAR 322

Query: 828 AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
           AVAS AG + + V GPEL S + GE+E+ +R +F +AR  +P I+  DE+D L   R   
Sbjct: 323 AVASSAGCSCIVVNGPELSSAYHGETEERLRGVFTEARKRSPCIVVLDEVDALCP-RRDG 381

Query: 888 SDGVSVSDRVMSQLLVELDGL-HQRV---NVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            +G  V  RV++ LL  +DG+ H+ +    V V+AATNRP+ IDPAL RPGRFDR + +G
Sbjct: 382 GEGGEVERRVVATLLTLMDGMSHESLEGERVFVVAATNRPNSIDPALRRPGRFDREIEIG 441

Query: 944 PPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAI 996
            P+   R EI  I L KIP S S+ ++  LA  + G  GAD+  + RE+A +AI
Sbjct: 442 VPDVKGRREILDIMLSKIPHSLSEGDLSSLAARTHGYVGADLFSLVRESASAAI 495



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 120/212 (56%), Gaps = 17/212 (8%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           + T   LG+   +GVLL+GPPG  KT  A+  A +SG+N   V GPE++++  GESE+A+
Sbjct: 564 RDTFKRLGVEAPRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAV 623

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
            E+F  A  ++P+++F DE+DA+  AR D  +     ++ +LLN MDGV    GV V+AA
Sbjct: 624 REIFRKARAASPSIIFFDEIDALGSARSD--DHTLSGVLTSLLNEMDGVEELSGVTVVAA 681

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD ++ AL RPGRLDR + +                P    R +I    ++ M    
Sbjct: 682 TNRPDVLDSALMRPGRLDRILYV--------------GAPDFETRKDIFRIRMATMAVE- 726

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VE L+  T G  GA++ ++C +AAL  +
Sbjct: 727 PGVNVEQLAEITEGCSGAEIVSVCQDAALAAM 758


>gi|207342744|gb|EDZ70411.1| YLR397Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 671

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 144/295 (48%), Positives = 210/295 (71%), Gaps = 7/295 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P +  E F
Sbjct: 374  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 433

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 434  ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 493

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ APSIIFFDEID L+  R   S   S ++ V++ LL E+DG+ +   V ++AATN
Sbjct: 494  RKARSAAPSIIFFDEIDALSPDRDGSS--TSAANHVLTSLLNEIDGVEELKGVVIVAATN 551

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 980
            RPD+ID ALLRPGR DR +YVGPP+   R EI +   +K     S V++ ELA  +EG +
Sbjct: 552  RPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYS 611

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA++ L+C+EA ++AI E+LD +++ ++H + A     R + P  +  Y+E + +
Sbjct: 612  GAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFALR 666



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/284 (42%), Positives = 171/284 (60%), Gaps = 34/284 (11%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEF-QNVQATVEQDI------SKLGGLSKEYAILKDII 427
           YL PP        R+G+     I F +  QA  + ++      + +GGL KE   LK  I
Sbjct: 101 YLSPPF-----IFRKGS---THITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAI 152

Query: 428 -ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 486
            I     +  SS G+ P +G+LLHGPPGTGKT L R+ A+ S  ++ T+NGP +VS+  G
Sbjct: 153 EIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLG 212

Query: 487 ESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTD 545
           E+E AL ++F+ A +  P+++FIDE+D+IAP R  D   E+  R+VATLL LMDG+    
Sbjct: 213 ETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAG 272

Query: 546 GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
            V+VIAATNRP+S++PALRRPGR D+E+EI               +P    R +IL    
Sbjct: 273 KVVVIAATNRPNSVDPALRRPGRFDQEVEI--------------GIPDVDARFDILTKQF 318

Query: 606 SGM--EHSLLDSE-VEYLSMATHGFVGADLAALCNEAALVCLRR 646
           S M  +  +LDSE ++Y++  THG+VGADL ALC E+ +  ++R
Sbjct: 319 SRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 362



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 28/314 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +    L  A+E P      F   G  PP GIL+ GPPG  KT++ R VA+ +
Sbjct: 135  YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTS 194

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID +A  R  +  G  V
Sbjct: 195  NAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG-EV 253

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     V VIAATNRP+ +DPAL RPGRFD+ + +G P+   R +I
Sbjct: 254  ESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDI 313

Query: 954  FRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIEENL--DAS---- 1003
                  ++     V     I+ +A  + G  GAD++ +CRE+ +  I+  L  DA+    
Sbjct: 314  LTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKF 373

Query: 1004 --RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 1046
              ++T++ +++A+  ++P               S+I   +EL  K + ++    EA E+ 
Sbjct: 374  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 433

Query: 1047 YQLRPSKSIGSNMW 1060
             +L  S   G  ++
Sbjct: 434  ARLGISAPKGVLLY 447



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 407 SDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 466

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE+ ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R       +  
Sbjct: 467 INFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANH 526

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV    GV+++AATNRPD I+ AL RPGRLDR I +              
Sbjct: 527 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYV-------------- 572

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RLEIL              ++  L+  T G+ GA++  LC EA L  +
Sbjct: 573 GPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 627


>gi|151940918|gb|EDN59300.1| ATPase family protein [Saccharomyces cerevisiae YJM789]
          Length = 780

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 144/295 (48%), Positives = 210/295 (71%), Gaps = 7/295 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P +  E F
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 543  ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 602

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ APSIIFFDEID L+  R   S   S ++ V++ LL E+DG+ +   V ++AATN
Sbjct: 603  RKARSAAPSIIFFDEIDALSPDRDGSS--TSAANHVLTSLLNEIDGVEELKGVVIVAATN 660

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 980
            RPD+ID ALLRPGR DR +YVGPP+   R EI +   +K     S V++ ELA  +EG +
Sbjct: 661  RPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYS 720

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA++ L+C+EA ++AI E+LD +++ ++H + A     R + P  +  Y+E + +
Sbjct: 721  GAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFALR 775



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/284 (42%), Positives = 171/284 (60%), Gaps = 34/284 (11%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEF-QNVQATVEQDI------SKLGGLSKEYAILKDII 427
           YL PP        R+G+     I F +  QA  + ++      + +GGL KE   LK  I
Sbjct: 210 YLSPPF-----IFRKGS---THITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAI 261

Query: 428 -ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 486
            I     +  SS G+ P +G+LLHGPPGTGKT L R+ A+ S  ++ T+NGP +VS+  G
Sbjct: 262 EIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLG 321

Query: 487 ESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTD 545
           E+E AL ++F+ A +  P+++FIDE+D+IAP R  D   E+  R+VATLL LMDG+    
Sbjct: 322 ETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAG 381

Query: 546 GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
            V+VIAATNRP+S++PALRRPGR D+E+EI               +P    R +IL    
Sbjct: 382 KVVVIAATNRPNSVDPALRRPGRFDQEVEI--------------GIPDVDARFDILTKQF 427

Query: 606 SGM--EHSLLDSE-VEYLSMATHGFVGADLAALCNEAALVCLRR 646
           S M  +  +LDSE ++Y++  THG+VGADL ALC E+ +  ++R
Sbjct: 428 SRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 28/314 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +    L  A+E P      F   G  PP GIL+ GPPG  KT++ R VA+ +
Sbjct: 244  YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTS 303

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID +A  R  +  G  V
Sbjct: 304  NAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG-EV 362

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     V VIAATNRP+ +DPAL RPGRFD+ + +G P+   R +I
Sbjct: 363  ESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDI 422

Query: 954  FRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIEENL--DAS---- 1003
                  ++     V     I+ +A  + G  GAD++ +CRE+ +  I+  L  DA+    
Sbjct: 423  LTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKF 482

Query: 1004 --RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 1046
              ++T++ +++A+  ++P               S+I   +EL  K + ++    EA E+ 
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 1047 YQLRPSKSIGSNMW 1060
             +L  S   G  ++
Sbjct: 543  ARLGISAPKGVLLY 556



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 516 SDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 575

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE+ ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R       +  
Sbjct: 576 INFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANH 635

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV    GV+++AATNRPD I+ AL RPGRLDR I +              
Sbjct: 636 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYV-------------- 681

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RLEIL              ++  L+  T G+ GA++  LC EA L  +
Sbjct: 682 GPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736


>gi|68076493|ref|XP_680166.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56501060|emb|CAH98427.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 931

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 187/574 (32%), Positives = 295/574 (51%), Gaps = 97/574 (16%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLA----------------------------RLC 464
           K+      +   KGVL HGPPG GKT LA                             L 
Sbjct: 243 KNIYDQFNIDVNKGVLFHGPPGCGKTFLALAIKEELIILQKKINSIKKKSDLSAQQVELQ 302

Query: 465 AHDSGVNLFTVNGP--------------EVVSQNYGESEQALHEVF-----DSASQSAPA 505
            +D   +    N P              E++  N   S   ++E+F         +   +
Sbjct: 303 INDQKESKSKKNNPIDFLIPDMEIFKSNELIDNN--NSGMKINELFLRCYKRYKEEKKCS 360

Query: 506 VVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRR 565
           +VFIDE++ +   R++    L      TLLN MDGV R +   +I ATN  + ++ ALRR
Sbjct: 361 IVFIDEIEILCEKRENSNINL---YTTTLLNNMDGV-RKNTHTLIGATNYINKLDLALRR 416

Query: 566 PGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH 625
            GR D EIEI++              P+   R+ IL   L  + H++ + +++ L+    
Sbjct: 417 SGRFDIEIEINL--------------PNLKDRISILKKKLYNINHNINNKQIKKLADICQ 462

Query: 626 GFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITE 685
            F  +D+ +L N +  + LR               G L      S  +L  S   +   +
Sbjct: 463 SFTCSDINSLINVSMYINLR-------------ENGVL------SKNILNRSIKKKLAIK 503

Query: 686 SSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKL 745
            ++   +  S  TS+   ++ ++++ L   +SE  + F+  + +++      E  C LK 
Sbjct: 504 KTKKIPEEESQTTSNKTLNIYNNTINL-IKISEKKNTFNENLINNT------EDKCVLKY 556

Query: 746 ELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIG 805
           E +   K    V+PS M+E+ +++PK + +D+GG + VK  + E + +P+ +++ +++  
Sbjct: 557 EHI--TKGLKYVKPSGMKELYIDIPKTRIKDIGGYKIVKQCIKECLIYPKIYKKLYEKYN 614

Query: 806 TRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR 865
            + P GIL++GPPGCSKTL A+A+ASE  +NF++VKGPE+FSK+VGESEK +R +F KAR
Sbjct: 615 IQTPKGILLYGPPGCSKTLFAKAIASEINMNFISVKGPEIFSKYVGESEKTIRDIFKKAR 674

Query: 866 ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDK 925
            N+P +IFFDEID +A+ R    +   VS+RV+ QLL E+DG+  R +V ++ ATNRPD 
Sbjct: 675 ENSPCVIFFDEIDSIASNRNLNQNF--VSNRVLCQLLNEIDGITIRADVIILGATNRPDL 732

Query: 926 IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR 959
           IDPA LRPGRFDR++YV  PN   R  I +  L+
Sbjct: 733 IDPAALRPGRFDRIIYVPLPNYKSRFSILKKTLK 766



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 104/180 (57%), Gaps = 4/180 (2%)

Query: 410 ISKLGGLSKEYAILKDIIISSSV-KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           I  +GG       +K+ +I   + K       ++  KG+LL+GPPG  KT  A+  A + 
Sbjct: 583 IKDIGGYKIVKQCIKECLIYPKIYKKLYEKYNIQTPKGILLYGPPGCSKTLFAKAIASEI 642

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            +N  +V GPE+ S+  GESE+ + ++F  A +++P V+F DE+D+IA  R      +S 
Sbjct: 643 NMNFISVKGPEIFSKYVGESEKTIRDIFKKARENSPCVIFFDEIDSIASNRNLNQNFVSN 702

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLK 585
           R++  LLN +DG+     V+++ ATNRPD I+PA  RPGR DR I +   +    FS+LK
Sbjct: 703 RVLCQLLNEIDGITIRADVIILGATNRPDLIDPAALRPGRFDRIIYVPLPNYKSRFSILK 762



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 116/281 (41%), Gaps = 61/281 (21%)

Query: 770 PKVK-WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
           PK K    +GG +++K  +   +  P  ++  + +       G+L  GPPGC KT +A A
Sbjct: 214 PKKKGLNKIGGYKKIKEDIYYYILLPLLYKNIYDQFNIDVNKGVLFHGPPGCGKTFLALA 273

Query: 829 VASE-------------------------------------AGLNFLA-----VKGPELF 846
           +  E                                       ++FL       K  EL 
Sbjct: 274 IKEELIILQKKINSIKKKSDLSAQQVELQINDQKESKSKKNNPIDFLIPDMEIFKSNELI 333

Query: 847 SKWVGESEKAVRSLFAKARANAP-----SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQL 901
                 S   +  LF +           SI+F DEI+ L   R  E+  +++     + L
Sbjct: 334 DN--NNSGMKINELFLRCYKRYKEEKKCSIVFIDEIEILCEKR--ENSNINL---YTTTL 386

Query: 902 LVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKI 961
           L  +DG+ +  + T+I ATN  +K+D AL R GRFD  + +  PN  DR  I +  L  I
Sbjct: 387 LNNMDGVRKNTH-TLIGATNYINKLDLALRRSGRFDIEIEINLPNLKDRISILKKKLYNI 445

Query: 962 PCSSDVN---IRELACLSEGCTGADISLICREAAISAIEEN 999
             + ++N   I++LA + +  T +DI+ +   +    + EN
Sbjct: 446 --NHNINNKQIKKLADICQSFTCSDINSLINVSMYINLREN 484


>gi|190405439|gb|EDV08706.1| protein AFG2 [Saccharomyces cerevisiae RM11-1a]
          Length = 780

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 144/295 (48%), Positives = 210/295 (71%), Gaps = 7/295 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P +  E F
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 543  ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 602

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ APSIIFFDEID L+  R   S   S ++ V++ LL E+DG+ +   V ++AATN
Sbjct: 603  RKARSAAPSIIFFDEIDALSPDRDGSS--TSAANHVLTSLLNEIDGVEELKGVVIVAATN 660

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 980
            RPD+ID ALLRPGR DR +YVGPP+   R EI +   +K     S V++ ELA  +EG +
Sbjct: 661  RPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYS 720

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA++ L+C+EA ++AI E+LD +++ ++H + A     R + P  +  Y+E + +
Sbjct: 721  GAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFALR 775



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/284 (41%), Positives = 170/284 (59%), Gaps = 34/284 (11%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEF-QNVQATVEQDI------SKLGGLSKEYAILKDII 427
           YL PP        R+G+     I F +  QA  + ++      + +GGL KE   LK  I
Sbjct: 210 YLSPPF-----IFRKGS---THITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAI 261

Query: 428 -ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 486
            I     +  SS G+ P +G+LLHGPPGTGKT L R+ A+ S  ++ T+NGP +VS+  G
Sbjct: 262 EIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLG 321

Query: 487 ESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTD 545
           E+E AL ++F+ A +  P+++FIDE+D+IAP R  D   E+  R+VATLL LMDG+    
Sbjct: 322 ETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAG 381

Query: 546 GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
            V+VIAATNRP+S++ ALRRPGR D+E+EI               +P    R +IL    
Sbjct: 382 KVVVIAATNRPNSVDHALRRPGRFDQEVEI--------------GIPDVDARFDILTKQF 427

Query: 606 SGM--EHSLLDSE-VEYLSMATHGFVGADLAALCNEAALVCLRR 646
           S M  +  +LDSE ++Y++  THG+VGADL ALC E+ +  ++R
Sbjct: 428 SRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471



 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 166/314 (52%), Gaps = 28/314 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +    L  A+E P      F   G  PP GIL+ GPPG  KT++ R VA+ +
Sbjct: 244  YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTS 303

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID +A  R  +  G  V
Sbjct: 304  NAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG-EV 362

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     V VIAATNRP+ +D AL RPGRFD+ + +G P+   R +I
Sbjct: 363  ESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDHALRRPGRFDQEVEIGIPDVDARFDI 422

Query: 954  FRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIEENL--DAS---- 1003
                  ++     V     I+ +A  + G  GAD++ +CRE+ +  I+  L  DA+    
Sbjct: 423  LTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKF 482

Query: 1004 --RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 1046
              ++T++ +++A+  ++P               S+I   +EL  K + ++    EA E+ 
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 1047 YQLRPSKSIGSNMW 1060
             +L  S   G  ++
Sbjct: 543  ARLGISAPKGVLLY 556



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 516 SDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 575

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE+ ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R       +  
Sbjct: 576 INFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANH 635

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV    GV+++AATNRPD I+ AL RPGRLDR I +              
Sbjct: 636 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYV-------------- 681

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RLEIL              ++  L+  T G+ GA++  LC EA L  +
Sbjct: 682 GPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736


>gi|435846442|ref|YP_007308692.1| AAA family ATPase, CDC48 subfamily [Natronococcus occultus SP4]
 gi|433672710|gb|AGB36902.1| AAA family ATPase, CDC48 subfamily [Natronococcus occultus SP4]
          Length = 748

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 148/285 (51%), Positives = 197/285 (69%), Gaps = 11/285 (3%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A   V PSAMREV +EVP V WEDVGG  E K +L EA++WP +H +A++++G  P
Sbjct: 443  DFRSALRGVEPSAMREVFVEVPDVTWEDVGGLEEAKGRLREAIQWPMEHADAYEQVGLSP 502

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+L+ GPPG  KTL+A+AVA+E+  NF++VKGPELF K+VGESEK VR +F KARANA
Sbjct: 503  AKGVLLHGPPGTGKTLLAKAVANESQSNFISVKGPELFDKYVGESEKGVREVFEKARANA 562

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDEID +A+ RG  S   +V +RV+SQLL ELDGL +  +V V+AA+NRP+ ID 
Sbjct: 563  PTIIFFDEIDAIASKRGSGSGDSNVGERVVSQLLTELDGLEELEDVVVVAASNRPELIDD 622

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR + VG P+   R EIFRIH +  P ++DV++  LA  +EG TGADI  +C
Sbjct: 623  ALLRPGRLDRHVEVGEPDTDARREIFRIHTQNRPLAADVDLDTLAEETEGYTGADIEAVC 682

Query: 989  REAAISAIEE-----------NLDASRITMQHLKTAIRHVQPSEI 1022
            REAA  A+ E           +++A  +T  H + A+  + P  +
Sbjct: 683  REAATIAVREHVERETTGEDSDVEAIELTADHFERALEEIAPDAV 727



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/298 (40%), Positives = 177/298 (59%), Gaps = 19/298 (6%)

Query: 740  GCALKLELVDFEKARMKVRPSAMRE--VILEVPKVKWEDVGGQREVKTQLMEAVEWPQKH 797
            G    +ELV+ +  R+++      E    +E P V +EDVGG  +   Q+ E +E P +H
Sbjct: 159  GNRTDVELVERDADRLEIEADGPIEDGSEIESPDVAYEDVGGLEDELEQVREMIELPMRH 218

Query: 798  QEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 857
             E F+ +G  PP G+L+ GPPG  KTL+ARAVASE   +F+ + GPE+ SK+ GESE+ +
Sbjct: 219  PELFRTLGIEPPKGVLLHGPPGTGKTLIARAVASEVDAHFVTLSGPEIMSKYYGESEEQL 278

Query: 858  RSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVI 917
            R +F +A  N P+I+F DE+D +A  R  E     V  RV++QLL  +DGL  R  +TVI
Sbjct: 279  RDIFEEAAENEPAIVFIDELDSIAPKR--EDVQGDVERRVVAQLLSLMDGLEDRGEITVI 336

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
              TNR D IDPAL RPGRFDR + +G P+   REE+ +IH R +P + DV++   A  + 
Sbjct: 337  GTTNRVDAIDPALRRPGRFDREIEIGVPDAAGREEVLQIHTRGMPLAEDVDLERFAENTH 396

Query: 978  GCTGADISLICREAAISAIE---------------ENLDASRITMQHLKTAIRHVQPS 1020
            G  GAD+  + +EAA++A+                E L+   +T Q  ++A+R V+PS
Sbjct: 397  GFVGADLENLAKEAAMTAMRRLRPELDLEADEIDAEVLEKIEVTAQDFRSALRGVEPS 454



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/235 (45%), Positives = 149/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +         +LG+ P KGVLLHGPPGTGKT +AR  A +   +
Sbjct: 198 VGGLEDELEQVREMIELPMRHPELFRTLGIEPPKGVLLHGPPGTGKTLIARAVASEVDAH 257

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L ++F+ A+++ PA+VFIDELD+IAP R+D   ++ +R+V
Sbjct: 258 FVTLSGPEIMSKYYGESEEQLRDIFEEAAENEPAIVFIDELDSIAPKREDVQGDVERRVV 317

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     + VI  TNR D+I+PALRRPGR DREIEI               V
Sbjct: 318 AQLLSLMDGLEDRGEITVIGTTNRVDAIDPALRRPGRFDREIEI--------------GV 363

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P  A R E+L     GM  +  D ++E  +  THGFVGADL  L  EAA+  +RR
Sbjct: 364 PDAAGREEVLQIHTRGMPLA-EDVDLERFAENTHGFVGADLENLAKEAAMTAMRR 417



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/275 (36%), Positives = 152/275 (55%), Gaps = 22/275 (8%)

Query: 385 KSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLR 442
           +S   G  P+A  E F  V     +D+   GGL +    L++ I            +GL 
Sbjct: 445 RSALRGVEPSAMREVFVEVPDVTWEDV---GGLEEAKGRLREAIQWPMEHADAYEQVGLS 501

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P KGVLLHGPPGTGKT LA+  A++S  N  +V GPE+  +  GESE+ + EVF+ A  +
Sbjct: 502 PAKGVLLHGPPGTGKTLLAKAVANESQSNFISVKGPELFDKYVGESEKGVREVFEKARAN 561

Query: 503 APAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           AP ++F DE+DAIA  R  G  +  + +R+V+ LL  +DG+   + V+V+AA+NRP+ I+
Sbjct: 562 APTIIFFDEIDAIASKRGSGSGDSNVGERVVSQLLTELDGLEELEDVVVVAASNRPELID 621

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
            AL RPGRLDR +E+                P    R EI   + +       D +++ L
Sbjct: 622 DALLRPGRLDRHVEV--------------GEPDTDARREIFR-IHTQNRPLAADVDLDTL 666

Query: 621 SMATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
           +  T G+ GAD+ A+C EAA + +R + + +T+ +
Sbjct: 667 AEETEGYTGADIEAVCREAATIAVREHVERETTGE 701


>gi|256269128|gb|EEU04463.1| Afg2p [Saccharomyces cerevisiae JAY291]
          Length = 780

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 144/295 (48%), Positives = 210/295 (71%), Gaps = 7/295 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P +  E F
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 543  ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 602

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ APSIIFFDEID L+  R   S   S ++ V++ LL E+DG+ +   V ++AATN
Sbjct: 603  RKARSAAPSIIFFDEIDALSPDRDGSS--TSAANHVLTSLLNEIDGVEELKGVVIVAATN 660

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 980
            RPD+ID ALLRPGR DR +YVGPP+   R EI +   +K     S V++ ELA  +EG +
Sbjct: 661  RPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYS 720

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA++ L+C+EA ++AI E+LD +++ ++H + A     R + P  +  Y+E + +
Sbjct: 721  GAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFALR 775



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/284 (42%), Positives = 171/284 (60%), Gaps = 34/284 (11%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEF-QNVQATVEQDI------SKLGGLSKEYAILKDII 427
           YL PP        R+G+     I F +  QA  + ++      + +GGL KE   LK  I
Sbjct: 210 YLSPPF-----IFRKGS---THITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAI 261

Query: 428 -ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 486
            I     +  SS G+ P +G+LLHGPPGTGKT L R+ A+ S  ++ T+NGP +VS+  G
Sbjct: 262 EIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLG 321

Query: 487 ESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTD 545
           E+E AL ++F+ A +  P+++FIDE+D+IAP R  D   E+  R+VATLL LMDG+    
Sbjct: 322 ETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGVAG 381

Query: 546 GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
            V+VIAATNRP+S++PALRRPGR D+E+EI               +P    R +IL    
Sbjct: 382 KVVVIAATNRPNSVDPALRRPGRFDQEVEI--------------GIPDVDARFDILTKQF 427

Query: 606 SGM--EHSLLDSE-VEYLSMATHGFVGADLAALCNEAALVCLRR 646
           S M  +  +LDSE ++Y++  THG+VGADL ALC E+ +  ++R
Sbjct: 428 SRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 28/314 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +    L  A+E P      F   G  PP GIL+ GPPG  KT++ R VA+ +
Sbjct: 244  YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTS 303

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID +A  R  +  G  V
Sbjct: 304  NAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG-EV 362

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     V VIAATNRP+ +DPAL RPGRFD+ + +G P+   R +I
Sbjct: 363  ESRVVATLLTLMDGMGVAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDI 422

Query: 954  FRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIEENL--DAS---- 1003
                  ++     V     I+ +A  + G  GAD++ +CRE+ +  I+  L  DA+    
Sbjct: 423  LTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKF 482

Query: 1004 --RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 1046
              ++T++ +++A+  ++P               S+I   +EL  K + ++    EA E+ 
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 1047 YQLRPSKSIGSNMW 1060
             +L  S   G  ++
Sbjct: 543  ARLGISAPKGVLLY 556



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 516 SDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 575

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE+ ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R       +  
Sbjct: 576 INFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANH 635

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV    GV+++AATNRPD I+ AL RPGRLDR I +              
Sbjct: 636 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYV-------------- 681

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RLEIL              ++  L+  T G+ GA++  LC EA L  +
Sbjct: 682 GPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736


>gi|405121844|gb|AFR96612.1| AAA family ATPase [Cryptococcus neoformans var. grubii H99]
          Length = 803

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 144/284 (50%), Positives = 199/284 (70%), Gaps = 8/284 (2%)

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            VD       +RPSAMREV +E P V+W D+GGQ++VK +L E +EWP  H++ FKR+G  
Sbjct: 514  VDILSTLPSIRPSAMREVFIETPTVRWSDIGGQQDVKQKLRECIEWPLMHRDTFKRLGVE 573

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
             P G+L++GPPGCSKT+ A+A+A+E+G+NF+AVKGPEL +K+VGESE+AVR +F KARA 
Sbjct: 574  APRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAVREIFRKARAA 633

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            +PSIIFFDEID L + R  +         V++ LL E+DG+ +   VTV+AATNRPD +D
Sbjct: 634  SPSIIFFDEIDALGSARSDD----HAHSGVLTSLLNEMDGVEELSGVTVVAATNRPDVLD 689

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLI 987
             AL+RPGR DR+LYVG P+   R++IFRI L  +     VN+  LA ++EGC+GA+I  I
Sbjct: 690  SALMRPGRLDRILYVGAPDLETRKDIFRIRLATMAVEPGVNVERLAEITEGCSGAEIVSI 749

Query: 988  CREAAISAIEENLDASRITMQHL----KTAIRHVQPSEIHSYKE 1027
            C++AA++A+ E+LDA  I   HL     T  R + P  I  ++E
Sbjct: 750  CQDAALAAMNESLDAPYIKGSHLVNSAHTVRRRITPEMISFFEE 793



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/264 (43%), Positives = 158/264 (59%), Gaps = 25/264 (9%)

Query: 394 NAQIEFQNVQATVEQDISK---LGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLL 449
           N+   + N+    E  IS    LGGL  +   +K ++    +   L    GL P +G+LL
Sbjct: 250 NSVPHYINLFTPTESPISAYTFLGGLQSQIDQIKTLLDLPMLHPDLYIRFGLNPPRGILL 309

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
           HGPPGTGKT+LAR  A  +G +   VNGPE+ S  +GE+E+ L  VF  A + +P +V +
Sbjct: 310 HGPPGTGKTALARAVASSAGCSCIVVNGPELSSAYHGETEERLRGVFTEARKRSPCIVVL 369

Query: 510 DELDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRT----DGVLVIAATNRPDSIEPAL 563
           DE+DA+ P R+DGGE  E+ +R+VATLL LMDG+       + V V+AATNRP+SI+PAL
Sbjct: 370 DEVDALCP-RRDGGEGGEVERRVVATLLTLMDGMSHESLEGERVFVVAATNRPNSIDPAL 428

Query: 564 RRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA 623
           RRPGR DREIE+               VP    R EIL  +LS + HSL + ++  L+  
Sbjct: 429 RRPGRFDREIEV--------------GVPDVKGRREILDIMLSKIPHSLSEEDLSSLAAR 474

Query: 624 THGFVGADLAALCNEAALVCLRRY 647
           THG+VGADL +L  E+A   + R+
Sbjct: 475 THGYVGADLFSLVRESASAAISRF 498



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/234 (43%), Positives = 141/234 (60%), Gaps = 6/234 (2%)

Query: 768 EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
           E P   +  +GG +    Q+   ++ P  H + + R G  PP GIL+ GPPG  KT +AR
Sbjct: 263 ESPISAYTFLGGLQSQIDQIKTLLDLPMLHPDLYIRFGLNPPRGILLHGPPGTGKTALAR 322

Query: 828 AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
           AVAS AG + + V GPEL S + GE+E+ +R +F +AR  +P I+  DE+D L   R   
Sbjct: 323 AVASSAGCSCIVVNGPELSSAYHGETEERLRGVFTEARKRSPCIVVLDEVDALCP-RRDG 381

Query: 888 SDGVSVSDRVMSQLLVELDGL-HQRV---NVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            +G  V  RV++ LL  +DG+ H+ +    V V+AATNRP+ IDPAL RPGRFDR + VG
Sbjct: 382 GEGGEVERRVVATLLTLMDGMSHESLEGERVFVVAATNRPNSIDPALRRPGRFDREIEVG 441

Query: 944 PPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAI 996
            P+   R EI  I L KIP S S+ ++  LA  + G  GAD+  + RE+A +AI
Sbjct: 442 VPDVKGRREILDIMLSKIPHSLSEEDLSSLAARTHGYVGADLFSLVRESASAAI 495



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 17/212 (8%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           + T   LG+   +GVLL+GPPG  KT  A+  A +SG+N   V GPE++++  GESE+A+
Sbjct: 564 RDTFKRLGVEAPRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAV 623

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
            E+F  A  ++P+++F DE+DA+  AR D  +     ++ +LLN MDGV    GV V+AA
Sbjct: 624 REIFRKARAASPSIIFFDEIDALGSARSD--DHAHSGVLTSLLNEMDGVEELSGVTVVAA 681

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD ++ AL RPGRLDR + +                P    R +I    L+ M    
Sbjct: 682 TNRPDVLDSALMRPGRLDRILYV--------------GAPDLETRKDIFRIRLATMAVE- 726

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VE L+  T G  GA++ ++C +AAL  +
Sbjct: 727 PGVNVERLAEITEGCSGAEIVSICQDAALAAM 758


>gi|110669061|ref|YP_658872.1| AAA-type ATPase (transitional ATPase homolog) [Haloquadratum walsbyi
            DSM 16790]
 gi|385804649|ref|YP_005841049.1| AAA ATPase [Haloquadratum walsbyi C23]
 gi|109626808|emb|CAJ53276.1| AAA-type ATPase (CDC48 subfamily) [Haloquadratum walsbyi DSM 16790]
 gi|339730141|emb|CCC41459.1| AAA-type ATPase (CDC48 subfamily) [Haloquadratum walsbyi C23]
          Length = 742

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 205/289 (70%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A   V PSAMREV++E+PKV W+DVGG      ++ E+VEWP   +  F+R+G   
Sbjct: 436  DFNDALSDVEPSAMREVLVELPKVSWDDVGGLEGPTQKVKESVEWPITSRGRFERMGIDA 495

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 496  PKGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 555

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG  + G +VS+RV++QLL ELDGL +  NV V+AATNRPD IDP
Sbjct: 556  PTVIFFDELDSLAPSRGGGT-GNNVSERVVNQLLTELDGLEENGNVMVVAATNRPDMIDP 614

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P E  RE+I +IH R  P + DV++RE+A +++G  G+D+  I 
Sbjct: 615  ALIRSGRFDRLVLIGQPGEEGREQILKIHTRNSPLAPDVSLREIAEITDGYVGSDLESIA 674

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ DA  I M+H + A+  V+ +     ++ Y+++  +F+
Sbjct: 675  REAAIEALREDGDAQEIEMRHFRKAMESVRATITDDLMNYYEDMQEEFK 723



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 186  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 246  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 304  EVERRVVAQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 364  EILQIHTRGMPLSDDVSLDYLADETHGFVGADIESLTKEAAMKALRRYL 412



 Score =  216 bits (549), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 191 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 311 AQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  ++YL+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 357 PDEVGRKEILQIHTRGMPLS-DDVSLDYLADETHGFVGADIESLTKEAAMKALRRY 411



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 127/222 (57%), Gaps = 20/222 (9%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           +     +G+   KGVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+
Sbjct: 485 RGRFERMGIDAPKGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGESEKAI 544

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            + F  A Q +P V+F DELD++AP+R  G G  +S+R+V  LL  +DG+     V+V+A
Sbjct: 545 RQTFRKARQVSPTVIFFDELDSLAPSRGGGTGNNVSERVVNQLLTELDGLEENGNVMVVA 604

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL R GR DR + I                P    R +IL        +S
Sbjct: 605 ATNRPDMIDPALIRSGRFDRLVLI--------------GQPGEEGREQILKI---HTRNS 647

Query: 612 LLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQ 651
            L  +V    +A  T G+VG+DL ++  EAA+  LR     Q
Sbjct: 648 PLAPDVSLREIAEITDGYVGSDLESIAREAAIEALREDGDAQ 689


>gi|6323429|ref|NP_013501.1| AAA family ATPase AFG2 [Saccharomyces cerevisiae S288c]
 gi|416590|sp|P32794.1|AFG2_YEAST RecName: Full=ATPase family gene 2 protein
 gi|295573|gb|AAC37367.1| AFG2 [Saccharomyces cerevisiae]
 gi|625113|gb|AAB82355.1| Afg2p [Saccharomyces cerevisiae]
 gi|51013683|gb|AAT93135.1| YLR397C [Saccharomyces cerevisiae]
 gi|259148375|emb|CAY81622.1| Afg2p [Saccharomyces cerevisiae EC1118]
 gi|285813802|tpg|DAA09698.1| TPA: AAA family ATPase AFG2 [Saccharomyces cerevisiae S288c]
 gi|323332432|gb|EGA73841.1| Afg2p [Saccharomyces cerevisiae AWRI796]
 gi|323336415|gb|EGA77683.1| Afg2p [Saccharomyces cerevisiae Vin13]
 gi|323353724|gb|EGA85580.1| Afg2p [Saccharomyces cerevisiae VL3]
 gi|365764187|gb|EHN05712.1| Afg2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392297899|gb|EIW08998.1| Afg2p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 780

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 144/295 (48%), Positives = 210/295 (71%), Gaps = 7/295 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P +  E F
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 543  ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 602

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ APSIIFFDEID L+  R   S   S ++ V++ LL E+DG+ +   V ++AATN
Sbjct: 603  RKARSAAPSIIFFDEIDALSPDRDGSS--TSAANHVLTSLLNEIDGVEELKGVVIVAATN 660

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 980
            RPD+ID ALLRPGR DR +YVGPP+   R EI +   +K     S V++ ELA  +EG +
Sbjct: 661  RPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYS 720

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA++ L+C+EA ++AI E+LD +++ ++H + A     R + P  +  Y+E + +
Sbjct: 721  GAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFALR 775



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/284 (42%), Positives = 171/284 (60%), Gaps = 34/284 (11%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEF-QNVQATVEQDI------SKLGGLSKEYAILKDII 427
           YL PP        R+G+     I F +  QA  + ++      + +GGL KE   LK  I
Sbjct: 210 YLSPPF-----IFRKGS---THITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAI 261

Query: 428 -ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 486
            I     +  SS G+ P +G+LLHGPPGTGKT L R+ A+ S  ++ T+NGP +VS+  G
Sbjct: 262 EIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLG 321

Query: 487 ESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTD 545
           E+E AL ++F+ A +  P+++FIDE+D+IAP R  D   E+  R+VATLL LMDG+    
Sbjct: 322 ETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAG 381

Query: 546 GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
            V+VIAATNRP+S++PALRRPGR D+E+EI               +P    R +IL    
Sbjct: 382 KVVVIAATNRPNSVDPALRRPGRFDQEVEI--------------GIPDVDARFDILTKQF 427

Query: 606 SGM--EHSLLDSE-VEYLSMATHGFVGADLAALCNEAALVCLRR 646
           S M  +  +LDSE ++Y++  THG+VGADL ALC E+ +  ++R
Sbjct: 428 SRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 28/314 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +    L  A+E P      F   G  PP GIL+ GPPG  KT++ R VA+ +
Sbjct: 244  YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTS 303

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID +A  R  +  G  V
Sbjct: 304  NAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG-EV 362

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     V VIAATNRP+ +DPAL RPGRFD+ + +G P+   R +I
Sbjct: 363  ESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDI 422

Query: 954  FRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIEENL--DAS---- 1003
                  ++     V     I+ +A  + G  GAD++ +CRE+ +  I+  L  DA+    
Sbjct: 423  LTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKF 482

Query: 1004 --RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 1046
              ++T++ +++A+  ++P               S+I   +EL  K + ++    EA E+ 
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 1047 YQLRPSKSIGSNMW 1060
             +L  S   G  ++
Sbjct: 543  ARLGISAPKGVLLY 556



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 516 SDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 575

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE+ ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R       +  
Sbjct: 576 INFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANH 635

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV    GV+++AATNRPD I+ AL RPGRLDR I +              
Sbjct: 636 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYV-------------- 681

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RLEIL              ++  L+  T G+ GA++  LC EA L  +
Sbjct: 682 GPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736


>gi|336272131|ref|XP_003350823.1| hypothetical protein SMAC_02492 [Sordaria macrospora k-hell]
 gi|380094987|emb|CCC07489.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 891

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 196/530 (36%), Positives = 283/530 (53%), Gaps = 55/530 (10%)

Query: 437 SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
           + +G R   GVLLHGP G GKT+LA   A   G     V+ P +V    GESE+ + EVF
Sbjct: 250 AKMGYRYDNGVLLHGPSGCGKTTLAHAVAGSVGAAFIPVSAPSIVGGTSGESEKNIREVF 309

Query: 497 DSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRT----DGVLVIAA 552
           D A + AP +VFIDE+DAIA  R+   + +  R+VA ++N MD + +       V+V+AA
Sbjct: 310 DEAIRLAPCLVFIDEIDAIAGKRESANKGMEGRIVAEIMNGMDRIKQQTPLGKNVVVLAA 369

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD ++PA+RR  R   EI++ M              P+   R  IL +L   +    
Sbjct: 370 TNRPDFLDPAIRR--RFSAEIDMGM--------------PNERAREHILKSLSRDLN--- 410

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHS 670
           +D++V +  +A  T G+VG+DL  +   A     R             S   L E     
Sbjct: 411 VDADVNFAELAKLTPGYVGSDLQYVVKAAVSESFR------------GSLDALLEKARQL 458

Query: 671 DTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDS 730
                ++  +   +ES  D  +       +L  +L   S   R  +  + D+     SDS
Sbjct: 459 RAAAAEAATAAITSESPEDYEEQQRQIQKELDDTLTGISQKQRDWLL-LEDHRQASWSDS 517

Query: 731 SGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEA 790
                     C   + +  F  A  +V+P++ RE    +P   W  VG   EV+ +L  +
Sbjct: 518 ----------C---ITMAQFRLAVSRVQPASKREGFSTIPDTTWAHVGALDEVRKKLEMS 564

Query: 791 VEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWV 850
           +  P K  E F ++G +P  GIL++GPPGC KTL+A+AVA+E+  NF+++KGPEL +K+V
Sbjct: 565 IIGPIKRPELFTKVGIKPAAGILLWGPPGCGKTLVAKAVANESKANFISIKGPELLNKYV 624

Query: 851 GESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLH 909
           GESE+AVR LFA+A+++AP I+FFDE+D L     K  D +S  S RV++ LL ELDG+ 
Sbjct: 625 GESERAVRQLFARAKSSAPCILFFDEMDALVP---KRDDSLSDASARVVNTLLTELDGVG 681

Query: 910 QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR 959
            R  + VI ATNRPD ID A+ RPGR    +YVG P+  DR +I R   R
Sbjct: 682 DRSGIYVIGATNRPDIIDEAIRRPGRLGTSIYVGLPSAEDRVDILRTLYR 731



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 138/256 (53%), Gaps = 9/256 (3%)

Query: 752  KARMKVRPSAMREVILEVPK-VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
            K R   + S  +EV    P  +  +D+ G  +   +L+  V +P    EA  ++G R   
Sbjct: 199  KKRKAEKISKEKEVDRSPPTGISIKDIAGVDDTLDKLLHEVWFPLCAGEACAKMGYRYDN 258

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            G+L+ GP GC KT +A AVA   G  F+ V  P +     GESEK +R +F +A   AP 
Sbjct: 259  GVLLHGPSGCGKTTLAHAVAGSVGAAFIPVSAPSIVGGTSGESEKNIREVFDEAIRLAPC 318

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV----NVTVIAATNRPDKI 926
            ++F DEID +A  R  ES    +  R++++++  +D + Q+     NV V+AATNRPD +
Sbjct: 319  LVFIDEIDAIAGKR--ESANKGMEGRIVAEIMNGMDRIKQQTPLGKNVVVLAATNRPDFL 376

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            DPA+ R  RF   + +G PNE  RE I +   R +   +DVN  ELA L+ G  G+D+  
Sbjct: 377  DPAIRR--RFSAEIDMGMPNERAREHILKSLSRDLNVDADVNFAELAKLTPGYVGSDLQY 434

Query: 987  ICREAAISAIEENLDA 1002
            + + A   +   +LDA
Sbjct: 435  VVKAAVSESFRGSLDA 450


>gi|148508161|gb|ABQ75952.1| AAA-type ATPase [uncultured haloarchaeon]
          Length = 752

 Score =  303 bits (777), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 205/289 (70%), Gaps = 5/289 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A   V PSAMREV++E+PKV W+DVGG      ++ E+VEWP   +  F+R+G   
Sbjct: 446  DFNDALSDVEPSAMREVLVELPKVSWDDVGGLEGPTQKVKESVEWPITSRGRFERMGIDA 505

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+E   NF++V+GP+L SKWVGESEKA+R  F KAR  +
Sbjct: 506  PKGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVS 565

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D LA  RG  + G +VS+RV++QLL ELDGL +  NV V+AATNRPD IDP
Sbjct: 566  PTVIFFDELDSLAPSRGGGT-GNNVSERVVNQLLTELDGLEENGNVMVVAATNRPDMIDP 624

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+R GRFDRL+ +G P E  RE+I +IH R  P + DV++RE+A +++G  G+D+  I 
Sbjct: 625  ALIRSGRFDRLVLIGQPGEEGREQILKIHTRNSPLAPDVSLREIAEITDGYVGSDLESIA 684

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 1033
            REAAI A+ E+ DA  I M+H + A+  V+ +     ++ Y+++  +F+
Sbjct: 685  REAAIEALREDGDAQEIEMRHFRKAMESVRATITDDLMNYYEDMQEEFK 733



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 107/229 (46%), Positives = 149/229 (65%), Gaps = 2/229 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG +    ++ E VE P KH + FK++G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 196  ITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 255

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESE+ +R +F  A   +PSIIF DE+D +A  R  E    
Sbjct: 256  ETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKR--EDVTG 313

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATNR D +DPAL RPGRFDR + +G P+E  R+
Sbjct: 314  EVERRVVAQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEIGVPDEVGRK 373

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
            EI +IH R +P S DV++  LA  + G  GADI  + +EAA+ A+   L
Sbjct: 374  EILQIHTRGMPLSDDVSLDYLADETHGFVGADIESLTKEAAMKALRRYL 422



 Score =  215 bits (548), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 153/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P +GVLLHGPPGTGKT LA+  A+++  +
Sbjct: 201 IGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 260

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F++ GPE++S+ YGESEQ L E+F+ A++ +P+++FIDELD+IAP R+D   E+ +R+V
Sbjct: 261 FFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKREDVTGEVERRVV 320

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL +MDG+     V+VI ATNR DS++PALRRPGR DREIEI               V
Sbjct: 321 AQLLTMMDGLETRGQVIVIGATNRVDSVDPALRRPGRFDREIEI--------------GV 366

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  S  D  ++YL+  THGFVGAD+ +L  EAA+  LRRY
Sbjct: 367 PDEVGRKEILQIHTRGMPLS-DDVSLDYLADETHGFVGADIESLTKEAAMKALRRY 421



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 127/222 (57%), Gaps = 20/222 (9%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           +     +G+   KGVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+
Sbjct: 495 RGRFERMGIDAPKGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGESEKAI 554

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            + F  A Q +P V+F DELD++AP+R  G G  +S+R+V  LL  +DG+     V+V+A
Sbjct: 555 RQTFRKARQVSPTVIFFDELDSLAPSRGGGTGNNVSERVVNQLLTELDGLEENGNVMVVA 614

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL R GR DR + I                P    R +IL        +S
Sbjct: 615 ATNRPDMIDPALIRSGRFDRLVLI--------------GQPGEEGREQILKI---HTRNS 657

Query: 612 LLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQ 651
            L  +V    +A  T G+VG+DL ++  EAA+  LR     Q
Sbjct: 658 PLAPDVSLREIAEITDGYVGSDLESIAREAAIEALREDGDAQ 699


>gi|332796313|ref|YP_004457813.1| AAA ATPase [Acidianus hospitalis W1]
 gi|332694048|gb|AEE93515.1| AAA family ATPase, CDC48 subfamily [Acidianus hospitalis W1]
          Length = 767

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 142/308 (46%), Positives = 211/308 (68%), Gaps = 30/308 (9%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            ++++++ DF  A  ++ PS MRE+ +EVP+V+W+D+GG  ++K +L E  E+P K QE +
Sbjct: 430  SMEVKMEDFMNALKEIVPSGMREIYIEVPEVRWDDIGGLGDIKEELREVAEYPLKFQEYY 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +  G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESE+A+R +F
Sbjct: 490  EMTGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESERAIREIF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR  AP++IFFDEID +A +RG   D   V++R+++QLL E+DG+ +  NV +IAATN
Sbjct: 550  RKARMYAPTVIFFDEIDAIAPMRGMSPD-TGVTERIVNQLLAEMDGIEKLDNVVIIAATN 608

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD +DPALLRPGRF++L+YV PP++  R EI R+H +K+    DVN+ E+A  ++G TG
Sbjct: 609  RPDILDPALLRPGRFEKLIYVPPPDKQARYEILRVHTKKVVLGEDVNLEEIAEKTDGYTG 668

Query: 982  ADISLICREAAISAIEENL-------------------DAS----------RITMQHLKT 1012
            AD++ + REAA+ AI E +                   DA           +I M+H + 
Sbjct: 669  ADLAALVREAAMIAIREGMKTCIDKVSNLCPPTDTDCRDAKMKECMKGSSVKIEMRHFEE 728

Query: 1013 AIRHVQPS 1020
            A++ V+PS
Sbjct: 729  ALKKVKPS 736



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 115/245 (46%), Positives = 166/245 (67%), Gaps = 2/245 (0%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V +ED+GG + +  ++ E VE P +H E FKR+G  PP G+L++GPPG  KTL+A+AV
Sbjct: 185  PRVTYEDIGGLKNIIQKVRELVELPLRHPELFKRLGIEPPKGVLLYGPPGTGKTLLAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DEID +A  R  E  
Sbjct: 245  ANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEIDAIAPKR-DEVI 303

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R NV VIAATNRP+ +DPAL RPGRFDR + +  P++  
Sbjct: 304  G-EVERRVVAQLLTLMDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQH 1009
            R EI +IH R +P + DV++ +LA ++ G TGAD++ + REAA++A+   L    IT+  
Sbjct: 363  RLEILQIHTRNMPLAKDVDLEKLAEVTHGYTGADLAALVREAAMNALRRYLPKIDITLDK 422

Query: 1010 LKTAI 1014
            +   I
Sbjct: 423  IPPEI 427



 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 110/221 (49%), Positives = 145/221 (65%), Gaps = 16/221 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL+GPPGTGKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 216 FKRLGIEPPKGVLLYGPPGTGKTLLAKAVANETDAYFTSINGPEIMSKFYGESEQRLREI 275

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 276 FEDAKKHAPAIIFIDEIDAIAPKRDEVIGEVERRVVAQLLTLMDGLESRGNVIVIAATNR 335

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREIEI +              P    RLEIL      M  +  D 
Sbjct: 336 PNAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLA-KDV 380

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY-SKIQTSSD 655
           ++E L+  THG+ GADLAAL  EAA+  LRRY  KI  + D
Sbjct: 381 DLEKLAEVTHGYTGADLAALVREAAMNALRRYLPKIDITLD 421



 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/306 (36%), Positives = 164/306 (53%), Gaps = 43/306 (14%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           D+T ++  P++ ESM+ +   F             +NA+ + +  G +    IE   V+ 
Sbjct: 417 DITLDKIPPEILESMEVKMEDF-------------MNALKEIVPSG-MREIYIEVPEVRW 462

Query: 405 TVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
               DI  LG + +E   + +  +    +      G+ P KG+LL GPPGTGKT LA+  
Sbjct: 463 ---DDIGGLGDIKEELREVAEYPLK--FQEYYEMTGIEPPKGILLFGPPGTGKTMLAKAV 517

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KD 521
           A +SG N   V GPEV+S+  GESE+A+ E+F  A   AP V+F DE+DAIAP R    D
Sbjct: 518 ATESGANFIAVRGPEVLSKWVGESERAIREIFRKARMYAPTVIFFDEIDAIAPMRGMSPD 577

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
            G  +++R+V  LL  MDG+ + D V++IAATNRPD ++PAL RPGR ++ I        
Sbjct: 578 TG--VTERIVNQLLAEMDGIEKLDNVVIIAATNRPDILDPALLRPGRFEKLI-------- 627

Query: 582 SLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
                    VP P +  R EIL      +     D  +E ++  T G+ GADLAAL  EA
Sbjct: 628 --------YVPPPDKQARYEILRVHTKKVVLG-EDVNLEEIAEKTDGYTGADLAALVREA 678

Query: 640 ALVCLR 645
           A++ +R
Sbjct: 679 AMIAIR 684


>gi|134114111|ref|XP_774303.1| hypothetical protein CNBG2840 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50256938|gb|EAL19656.1| hypothetical protein CNBG2840 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 803

 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 140/275 (50%), Positives = 198/275 (72%), Gaps = 8/275 (2%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            +RPSAMREV +E P V+W D+GGQ++VK +L E +EWP  H++ FKR+G   P G+L++G
Sbjct: 523  IRPSAMREVFIETPTVRWSDIGGQQDVKQKLRECIEWPLMHRDTFKRLGVEAPRGVLLYG 582

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGCSKT+ A+A+A+E+G+NF+AVKGPEL +K+VGESE+AVR +F KARA +PSIIFFDE
Sbjct: 583  PPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAVREIFRKARAASPSIIFFDE 642

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID L + R  +         V++ LL E+DG+ +   VTV+AATNRPD +D AL+RPGR 
Sbjct: 643  IDALGSARSDD----HAHSGVLTSLLNEMDGVEELSGVTVVAATNRPDVLDSALMRPGRL 698

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR+LYVG P+   R++IFRI L  +     VN+ +LA ++EGC+GA++  IC++AA++A+
Sbjct: 699  DRILYVGAPDFETRKDIFRIRLATMAVEPGVNVEQLAEITEGCSGAEVVSICQDAALAAM 758

Query: 997  EENLDASRITMQHL----KTAIRHVQPSEIHSYKE 1027
             E+LDA  +   HL     T  R + P  I  ++E
Sbjct: 759  NESLDAPYVKASHLVNSAHTVRRRITPEMIAFFEE 793



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/242 (45%), Positives = 150/242 (61%), Gaps = 22/242 (9%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGGL  +   +K ++    +   L    GL P +G+LLHGPPGTGKT+LAR  A  +G +
Sbjct: 272 LGGLQSQIDQIKTLLDLPMLHPDLYIKFGLNPPRGILLHGPPGTGKTALARAVASSAGCS 331

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE--ELSQR 529
              VNGPE+ S  +GE+E+ L  VF  A + +P +V +DE+DA+ P R+DGGE  E+ +R
Sbjct: 332 CIVVNGPELSSAYHGETEERLRGVFTEARKRSPCIVVLDEVDALCP-RRDGGEGGEVERR 390

Query: 530 MVATLLNLMDGVCRT----DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +VATLL LMDG+       + V V+AATNRP+SI+PALRRPGR DREIE+          
Sbjct: 391 VVATLLTLMDGMSHESLEGERVFVVAATNRPNSIDPALRRPGRFDREIEV---------- 440

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                VP    R EIL  +LS + HSL + ++  L+  THG+VGADL +L  E+A   + 
Sbjct: 441 ----GVPDVKGRREILDIMLSKIPHSLSEKDLSSLAARTHGYVGADLFSLVRESASAAIS 496

Query: 646 RY 647
           R+
Sbjct: 497 RF 498



 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 141/234 (60%), Gaps = 6/234 (2%)

Query: 768 EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
           E P   +  +GG +    Q+   ++ P  H + + + G  PP GIL+ GPPG  KT +AR
Sbjct: 263 ESPVSAYTFLGGLQSQIDQIKTLLDLPMLHPDLYIKFGLNPPRGILLHGPPGTGKTALAR 322

Query: 828 AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
           AVAS AG + + V GPEL S + GE+E+ +R +F +AR  +P I+  DE+D L   R   
Sbjct: 323 AVASSAGCSCIVVNGPELSSAYHGETEERLRGVFTEARKRSPCIVVLDEVDALCP-RRDG 381

Query: 888 SDGVSVSDRVMSQLLVELDGL-HQRV---NVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            +G  V  RV++ LL  +DG+ H+ +    V V+AATNRP+ IDPAL RPGRFDR + VG
Sbjct: 382 GEGGEVERRVVATLLTLMDGMSHESLEGERVFVVAATNRPNSIDPALRRPGRFDREIEVG 441

Query: 944 PPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAI 996
            P+   R EI  I L KIP S S+ ++  LA  + G  GAD+  + RE+A +AI
Sbjct: 442 VPDVKGRREILDIMLSKIPHSLSEKDLSSLAARTHGYVGADLFSLVRESASAAI 495



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 17/212 (8%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           + T   LG+   +GVLL+GPPG  KT  A+  A +SG+N   V GPE++++  GESE+A+
Sbjct: 564 RDTFKRLGVEAPRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAV 623

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
            E+F  A  ++P+++F DE+DA+  AR D  +     ++ +LLN MDGV    GV V+AA
Sbjct: 624 REIFRKARAASPSIIFFDEIDALGSARSD--DHAHSGVLTSLLNEMDGVEELSGVTVVAA 681

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD ++ AL RPGRLDR + +                P    R +I    L+ M    
Sbjct: 682 TNRPDVLDSALMRPGRLDRILYV--------------GAPDFETRKDIFRIRLATMAVE- 726

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VE L+  T G  GA++ ++C +AAL  +
Sbjct: 727 PGVNVEQLAEITEGCSGAEVVSICQDAALAAM 758


>gi|349580094|dbj|GAA25255.1| K7_Afg2p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 780

 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 144/295 (48%), Positives = 210/295 (71%), Gaps = 7/295 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P +  E F
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 543  ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 602

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ APSIIFFDEID L+  R   S   S ++ V++ LL E+DG+ +   V ++AATN
Sbjct: 603  RKARSAAPSIIFFDEIDALSPDRDGSS--TSAANHVLTSLLNEIDGVEELKGVVIVAATN 660

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 980
            RPD+ID ALLRPGR DR +YVGPP+   R EI +   +K     S V++ ELA  +EG +
Sbjct: 661  RPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYS 720

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA++ L+C+EA ++AI E+LD +++ ++H + A     R + P  +  Y+E + +
Sbjct: 721  GAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFALR 775



 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/284 (42%), Positives = 171/284 (60%), Gaps = 34/284 (11%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEF-QNVQATVEQDI------SKLGGLSKEYAILKDII 427
           YL PP        R+G+     I F +  QA  + ++      + +GGL KE   LK  I
Sbjct: 210 YLSPPF-----IFRKGS---THITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAI 261

Query: 428 -ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 486
            I     +  SS G+ P +G+LLHGPPGTGKT L R+ A+ S  ++ T+NGP +VS+  G
Sbjct: 262 EIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLG 321

Query: 487 ESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTD 545
           E+E AL ++F+ A +  P+++FIDE+D+IAP R  D   E+  R+VATLL LMDG+    
Sbjct: 322 ETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAG 381

Query: 546 GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
            V+VIAATNRP+S++PALRRPGR D+E+EI               +P    R +IL    
Sbjct: 382 KVVVIAATNRPNSVDPALRRPGRFDQEVEI--------------GIPDVDARFDILTKQF 427

Query: 606 SGM--EHSLLDSE-VEYLSMATHGFVGADLAALCNEAALVCLRR 646
           S M  +  +LDSE ++Y++  THG+VGADL ALC E+ +  ++R
Sbjct: 428 SRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 28/314 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +    L  A+E P      F   G  PP GIL+ GPPG  KT++ R VA+ +
Sbjct: 244  YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTS 303

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID +A  R  +  G  V
Sbjct: 304  NAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG-EV 362

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     V VIAATNRP+ +DPAL RPGRFD+ + +G P+   R +I
Sbjct: 363  ESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDI 422

Query: 954  FRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIEENL--DAS---- 1003
                  ++     V     I+ +A  + G  GAD++ +CRE+ +  I+  L  DA+    
Sbjct: 423  LTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKF 482

Query: 1004 --RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 1046
              ++T++ +++A+  ++P               S+I   +EL  K + ++    EA E+ 
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 1047 YQLRPSKSIGSNMW 1060
             +L  S   G  ++
Sbjct: 543  ARLGISAPKGVLLY 556



 Score =  157 bits (398), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 516 SDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 575

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE+ ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R       +  
Sbjct: 576 INFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANH 635

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV    GV+++AATNRPD I+ AL RPGRLDR I +              
Sbjct: 636 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYV-------------- 681

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RLEIL              ++  L+  T G+ GA++  LC EA L  +
Sbjct: 682 GPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736


>gi|323303728|gb|EGA57514.1| Afg2p [Saccharomyces cerevisiae FostersB]
 gi|323307896|gb|EGA61156.1| Afg2p [Saccharomyces cerevisiae FostersO]
          Length = 780

 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 144/295 (48%), Positives = 210/295 (71%), Gaps = 7/295 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P +  E F
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 543  ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 602

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ APSIIFFDEID L+  R   S   S ++ V++ LL E+DG+ +   V ++AATN
Sbjct: 603  RKARSAAPSIIFFDEIDALSPDRDGSS--TSAANHVLTSLLNEIDGVEELKGVVIVAATN 660

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 980
            RPD+ID ALLRPGR DR +YVGPP+   R EI +   +K     S V++ ELA  +EG +
Sbjct: 661  RPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYS 720

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA++ L+C+EA ++AI E+LD +++ ++H + A     R + P  +  Y+E + +
Sbjct: 721  GAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFALR 775



 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/284 (42%), Positives = 171/284 (60%), Gaps = 34/284 (11%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEF-QNVQATVEQDI------SKLGGLSKEYAILKDII 427
           YL PP        R+G+     I F +  QA  + ++      + +GGL KE   LK  I
Sbjct: 210 YLSPPF-----IFRKGS---THITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAI 261

Query: 428 -ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 486
            I     +  SS G+ P +G+LLHGPPGTGKT L R+ A+ S  ++ T+NGP +VS+  G
Sbjct: 262 EIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLG 321

Query: 487 ESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTD 545
           E+E AL ++F+ A +  P+++FIDE+D+IAP R  D   E+  R+VATLL LMDG+    
Sbjct: 322 ETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAG 381

Query: 546 GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
            V+VIAATNRP+S++PALRRPGR D+E+EI               +P    R +IL    
Sbjct: 382 KVVVIAATNRPNSVDPALRRPGRFDQEVEI--------------GIPDVDARFDILTKQF 427

Query: 606 SGM--EHSLLDSE-VEYLSMATHGFVGADLAALCNEAALVCLRR 646
           S M  +  +LDSE ++Y++  THG+VGADL ALC E+ +  ++R
Sbjct: 428 SRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 28/314 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +    L  A+E P      F   G  PP GIL+ GPPG  KT++ R VA+ +
Sbjct: 244  YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTS 303

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID +A  R  +  G  V
Sbjct: 304  NAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG-EV 362

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     V VIAATNRP+ +DPAL RPGRFD+ + +G P+   R +I
Sbjct: 363  ESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDI 422

Query: 954  FRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIEENL--DAS---- 1003
                  ++     V     I+ +A  + G  GAD++ +CRE+ +  I+  L  DA+    
Sbjct: 423  LTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKF 482

Query: 1004 --RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 1046
              ++T++ +++A+  ++P               S+I   +EL  K + ++    EA E+ 
Sbjct: 483  SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 1047 YQLRPSKSIGSNMW 1060
             +L  S   G  ++
Sbjct: 543  ARLGISAPKGVLLY 556



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 516 SDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 575

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE+ ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R       +  
Sbjct: 576 INFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANH 635

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV    GV+++AATNRPD I+ AL RPGRLDR I +              
Sbjct: 636 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYV-------------- 681

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RLEIL              ++  L+  T G+ GA++  LC EA L  +
Sbjct: 682 GPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736


>gi|303276306|ref|XP_003057447.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461799|gb|EEH59092.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 637

 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 150/282 (53%), Positives = 202/282 (71%), Gaps = 7/282 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L +   DF  AR K+RPSAMREV +EVP V W+DVGG  EVK ++ EAVEW +K  EA  
Sbjct: 323  LHITDADFLDARTKIRPSAMREVQIEVPNVGWDDVGGLEEVKQRIKEAVEWSEKFPEAMA 382

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP GIL++GPPGCSKTL+A+AVAS++G NFL VKG EL+SKWVG+SEKAVR+LF 
Sbjct: 383  RMGAVPPKGILLYGPPGCSKTLLAKAVASQSGRNFLTVKGGELYSKWVGDSEKAVRTLFT 442

Query: 863  KARANAPSIIFFDEIDGLAAIRGKE-----SDGVSVSDRVMSQLLVELDGLHQRVN-VTV 916
            +A+ NAPS+IF DE+DGL   RG +       G SVSDRV++ +L  +DG+    + V V
Sbjct: 443  RAKTNAPSVIFLDELDGLVGKRGMDDGTESGGGPSVSDRVLTMMLTMMDGVGSLGDGVAV 502

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNET-DREEIFRIHLRKIPCSSDVNIRELACL 975
            +AATNRPD +DPALLRPGRFDRL+Y+ PP++  DR  I R+ L+K P   DV++  L   
Sbjct: 503  VAATNRPDLVDPALLRPGRFDRLIYIPPPDKAEDRTAILRVLLKKTPLDDDVDLDALGLA 562

Query: 976  SEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 1017
              G TGAD++ + RE+ ++A+EE+L+A++++ +H       V
Sbjct: 563  CAGYTGADLTAVVRESGLAALEESLEATKVSARHFTEGFGRV 604



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/252 (45%), Positives = 149/252 (59%), Gaps = 32/252 (12%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGG+    A L +++    +     +S G+ P +GVLL GPPGTGKT LAR  A  +  N
Sbjct: 70  LGGVGDIAATLLELVDYPLNRPEIFTSYGITPPRGVLLWGPPGTGKTRLARAAAEAAKAN 129

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR------------ 519
           L  VNGPE++    G+SE AL  VF +A++  P V+ +DELDAIAPAR            
Sbjct: 130 LLVVNGPEIIGAYVGQSEAALRGVFQAAAKQKPCVILLDELDAIAPARSDSDGGGAKGGG 189

Query: 520 -KDGGEELSQRMVATLLNLMDGV----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIE 574
              G +++S R+V+TLL +MDG        D V+VIA +NRP++I+ ALRRPGR DREIE
Sbjct: 190 SSGGEDQMSARVVSTLLTIMDGAQSNYVDMDKVIVIATSNRPEAIDRALRRPGRFDREIE 249

Query: 575 IDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAA 634
           +               VP+P QR EIL A L  ++H L D+  E LS  THGFVGAD+AA
Sbjct: 250 V--------------GVPAPKQRREILDAHLKTVKHELSDAAAEELSKNTHGFVGADVAA 295

Query: 635 LCNEAALVCLRR 646
           L   AA+  LRR
Sbjct: 296 LVQAAAMNALRR 307



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 127/239 (53%), Gaps = 16/239 (6%)

Query: 774 WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
           +E +GG  ++   L+E V++P    E F   G  PP G+L++GPPG  KT +ARA A  A
Sbjct: 67  FEALGGVGDIAATLLELVDYPLNRPEIFTSYGITPPRGVLLWGPPGTGKTRLARAAAEAA 126

Query: 834 GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG-------- 885
             N L V GPE+   +VG+SE A+R +F  A    P +I  DE+D +A  R         
Sbjct: 127 KANLLVVNGPEIIGAYVGQSEAALRGVFQAAAKQKPCVILLDELDAIAPARSDSDGGGAK 186

Query: 886 ---KESDGVSVSDRVMSQLLVELDGLHQRV----NVTVIAATNRPDKIDPALLRPGRFDR 938
                     +S RV+S LL  +DG          V VIA +NRP+ ID AL RPGRFDR
Sbjct: 187 GGGSSGGEDQMSARVVSTLLTIMDGAQSNYVDMDKVIVIATSNRPEAIDRALRRPGRFDR 246

Query: 939 LLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAI 996
            + VG P    R EI   HL+ +    SD    EL+  + G  GAD++ + + AA++A+
Sbjct: 247 EIEVGVPAPKQRREILDAHLKTVKHELSDAAAEELSKNTHGFVGADVAALVQAAAMNAL 305



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 143/277 (51%), Gaps = 36/277 (12%)

Query: 380 LNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSS 438
           L+A +K +R   +   QIE  NV          +GGL +    +K+ +  S      ++ 
Sbjct: 331 LDARTK-IRPSAMREVQIEVPNV------GWDDVGGLEEVKQRIKEAVEWSEKFPEAMAR 383

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G  P KG+LL+GPPG  KT LA+  A  SG N  TV G E+ S+  G+SE+A+  +F  
Sbjct: 384 MGAVPPKGILLYGPPGCSKTLLAKAVASQSGRNFLTVKGGELYSKWVGDSEKAVRTLFTR 443

Query: 499 ASQSAPAVVFIDELDAIAPAR-------KDGGEELSQRMVATLLNLMDGVCR-TDGVLVI 550
           A  +AP+V+F+DELD +   R         GG  +S R++  +L +MDGV    DGV V+
Sbjct: 444 AKTNAPSVIFLDELDGLVGKRGMDDGTESGGGPSVSDRVLTMMLTMMDGVGSLGDGVAVV 503

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ---RLEILHALLSG 607
           AATNRPD ++PAL RPGR DR I I                P P +   R  IL  LL  
Sbjct: 504 AATNRPDLVDPALLRPGRFDRLIYI----------------PPPDKAEDRTAILRVLLKK 547

Query: 608 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                   +++ L +A  G+ GADL A+  E+ L  L
Sbjct: 548 TPLDDD-VDLDALGLACAGYTGADLTAVVRESGLAAL 583


>gi|58269466|ref|XP_571889.1| hypothetical protein CNG01950 [Cryptococcus neoformans var.
            neoformans JEC21]
 gi|57228125|gb|AAW44582.1| hypothetical protein CNG01950 [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 803

 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 139/275 (50%), Positives = 198/275 (72%), Gaps = 8/275 (2%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            +RPSAMREV +E P V+W D+GGQ++VK +L E +EWP  H++ FKR+G   P G+L++G
Sbjct: 523  IRPSAMREVFIETPTVRWSDIGGQQDVKQKLRECIEWPLMHRDTFKRLGVEAPRGVLLYG 582

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGCSKT+ A+A+A+E+G+NF+AVKGPEL +K+VGESE+AVR +F KARA +PSIIFFDE
Sbjct: 583  PPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAVREIFRKARAASPSIIFFDE 642

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID L + R  +         V++ LL E+DG+ +   VTV+AATNRPD +D AL+RPGR 
Sbjct: 643  IDALGSARSDD----HAHSGVLTSLLNEMDGVEELSGVTVVAATNRPDVLDSALMRPGRL 698

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR+LYVG P+   R++IFRI L  +     +N+ +LA ++EGC+GA++  IC++AA++A+
Sbjct: 699  DRILYVGAPDFETRKDIFRIRLATMAVEPGINVEQLAEITEGCSGAEVVSICQDAALAAM 758

Query: 997  EENLDASRITMQHL----KTAIRHVQPSEIHSYKE 1027
             E+LDA  +   HL     T  R + P  I  ++E
Sbjct: 759  NESLDAPYVKASHLVNSAHTVRRRITPEMIAFFEE 793



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/242 (45%), Positives = 150/242 (61%), Gaps = 22/242 (9%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLS-SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGGL  +   +K ++    +   L    GL P +G+LLHGPPGTGKT+LAR  A  +G +
Sbjct: 272 LGGLQSQIDQIKTLLDLPMLHPDLYIKFGLNPPRGILLHGPPGTGKTALARAVASSAGCS 331

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE--ELSQR 529
              VNGPE+ S  +GE+E+ L  VF  A + +P +V +DE+DA+ P R+DGGE  E+ +R
Sbjct: 332 CIVVNGPELSSAYHGETEERLRGVFTEARKRSPCIVVLDEVDALCP-RRDGGEGGEVERR 390

Query: 530 MVATLLNLMDGVCRT----DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +VATLL LMDG+       + V V+AATNRP+SI+PALRRPGR DREIE+          
Sbjct: 391 VVATLLTLMDGMSHESLEGERVFVVAATNRPNSIDPALRRPGRFDREIEV---------- 440

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                VP    R EIL  +LS + HSL + ++  L+  THG+VGADL +L  E+A   + 
Sbjct: 441 ----GVPDVKGRREILDIMLSKIPHSLSEKDLSSLAARTHGYVGADLFSLVRESASAAIS 496

Query: 646 RY 647
           R+
Sbjct: 497 RF 498



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 141/234 (60%), Gaps = 6/234 (2%)

Query: 768 EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
           E P   +  +GG +    Q+   ++ P  H + + + G  PP GIL+ GPPG  KT +AR
Sbjct: 263 ESPVSAYTFLGGLQSQIDQIKTLLDLPMLHPDLYIKFGLNPPRGILLHGPPGTGKTALAR 322

Query: 828 AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
           AVAS AG + + V GPEL S + GE+E+ +R +F +AR  +P I+  DE+D L   R   
Sbjct: 323 AVASSAGCSCIVVNGPELSSAYHGETEERLRGVFTEARKRSPCIVVLDEVDALCP-RRDG 381

Query: 888 SDGVSVSDRVMSQLLVELDGL-HQRV---NVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            +G  V  RV++ LL  +DG+ H+ +    V V+AATNRP+ IDPAL RPGRFDR + VG
Sbjct: 382 GEGGEVERRVVATLLTLMDGMSHESLEGERVFVVAATNRPNSIDPALRRPGRFDREIEVG 441

Query: 944 PPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAI 996
            P+   R EI  I L KIP S S+ ++  LA  + G  GAD+  + RE+A +AI
Sbjct: 442 VPDVKGRREILDIMLSKIPHSLSEKDLSSLAARTHGYVGADLFSLVRESASAAI 495



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 122/214 (57%), Gaps = 21/214 (9%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           + T   LG+   +GVLL+GPPG  KT  A+  A +SG+N   V GPE++++  GESE+A+
Sbjct: 564 RDTFKRLGVEAPRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAV 623

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
            E+F  A  ++P+++F DE+DA+  AR D  +     ++ +LLN MDGV    GV V+AA
Sbjct: 624 REIFRKARAASPSIIFFDEIDALGSARSD--DHAHSGVLTSLLNEMDGVEELSGVTVVAA 681

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EH 610
           TNRPD ++ AL RPGRLDR + +                P    R +I    L+ M  E 
Sbjct: 682 TNRPDVLDSALMRPGRLDRILYV--------------GAPDFETRKDIFRIRLATMAVEP 727

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            +    VE L+  T G  GA++ ++C +AAL  +
Sbjct: 728 GI---NVEQLAEITEGCSGAEVVSICQDAALAAM 758


>gi|302837838|ref|XP_002950478.1| hypothetical protein VOLCADRAFT_60209 [Volvox carteri f. nagariensis]
 gi|300264483|gb|EFJ48679.1| hypothetical protein VOLCADRAFT_60209 [Volvox carteri f. nagariensis]
          Length = 375

 Score =  303 bits (776), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 150/259 (57%), Positives = 192/259 (74%), Gaps = 11/259 (4%)

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            A  +VRPSA+REV +EVP V+W+D+GG   VK  L EAVEWP K + +  R+GT PP G+
Sbjct: 61   AETRVRPSALREVAVEVPAVRWDDIGGLHSVKQALREAVEWPHKARSSLTRLGTAPPRGV 120

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L++GPPGCSKTL+ARAVASEAGLNFLAVKG EL SK+VGESEKAV  LFA+ARA APS+I
Sbjct: 121  LLYGPPGCSKTLLARAVASEAGLNFLAVKGGELVSKYVGESEKAVAGLFARARATAPSVI 180

Query: 873  FFDEIDGLAAIR-----------GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            F DE+DGL   R           G E     VS+R++SQLL+E+DGL +R +V V+AATN
Sbjct: 181  FLDELDGLVGSRGAPDAAGGGGGGGEGAAGGVSERLLSQLLMEMDGLRERGDVAVLAATN 240

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD +DPALLRPGRFDRL+YV  P+   R EI R+ LR+ P + DV++  LA  + G TG
Sbjct: 241  RPDCLDPALLRPGRFDRLIYVPIPDRDARLEILRVQLRRCPVADDVDLELLATRTAGYTG 300

Query: 982  ADISLICREAAISAIEENL 1000
            AD++ + +EA ++A+EE+L
Sbjct: 301  ADLAAVVQEAGLAALEEDL 319



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/246 (38%), Positives = 137/246 (55%), Gaps = 29/246 (11%)

Query: 413 LGGL-SKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL S + A+ + +      +S+L+ LG  P +GVLL+GPPG  KT LAR  A ++G+N
Sbjct: 85  IGGLHSVKQALREAVEWPHKARSSLTRLGTAPPRGVLLYGPPGCSKTLLARAVASEAGLN 144

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR------------ 519
              V G E+VS+  GESE+A+  +F  A  +AP+V+F+DELD +  +R            
Sbjct: 145 FLAVKGGELVSKYVGESEKAVAGLFARARATAPSVIFLDELDGLVGSRGAPDAAGGGGGG 204

Query: 520 -KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
            +     +S+R+++ LL  MDG+     V V+AATNRPD ++PAL RPGR DR I +   
Sbjct: 205 GEGAAGGVSERLLSQLLMEMDGLRERGDVAVLAATNRPDCLDPALLRPGRFDRLIYV--- 261

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                       +P    RLEIL   L     +  D ++E L+  T G+ GADLAA+  E
Sbjct: 262 -----------PIPDRDARLEILRVQLRRCPVA-DDVDLELLATRTAGYTGADLAAVVQE 309

Query: 639 AALVCL 644
           A L  L
Sbjct: 310 AGLAAL 315


>gi|308474132|ref|XP_003099288.1| CRE-CDC-48.3 protein [Caenorhabditis remanei]
 gi|308267427|gb|EFP11380.1| CRE-CDC-48.3 protein [Caenorhabditis remanei]
          Length = 728

 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 143/266 (53%), Positives = 196/266 (73%), Gaps = 8/266 (3%)

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            AR ++RP+ +R+ ILEVP V W+D+GG  E+K ++ +AV WPQKH EAF+R G  PP GI
Sbjct: 441  ARKRIRPTGIRQFILEVPNVSWQDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGI 500

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L++GPPGCSKTL+ARA+A+EA +NFLAVKGPELFSKWVG+SEKA+R LF++AR  AP+I+
Sbjct: 501  LLYGPPGCSKTLIARALANEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIV 560

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLR 932
            FFDEID + + RG E     VSDRV++QLL ELDGL +   V ++AATNRPD++D ALLR
Sbjct: 561  FFDEIDAVGSSRGSEKSS-GVSDRVLAQLLTELDGLEKSSRVVLLAATNRPDQLDSALLR 619

Query: 933  PGRFDRLLYVGPPNETDREEIFRIHLRKI----PCSSDVNIRELACLSEGCTGADISLIC 988
            PGR DR +YVG P E  R  I  +  RK+    P S+   I++L   + G +GA++  +C
Sbjct: 620  PGRLDRAIYVGLPCEVTRRAILEMRTRKMKFEDPTST---IQKLVEKTSGYSGAELVAVC 676

Query: 989  REAAISAIEENLDASRITMQHLKTAI 1014
            R AA+ A+ E+++AS +  +H + A+
Sbjct: 677  RTAAMFAMRESIEASVVQWKHFEEAL 702



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 141/269 (52%), Gaps = 24/269 (8%)

Query: 380 LNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSL 439
           +N   K +R   +    +E  NV     QDI   G    +  I + +I            
Sbjct: 438 VNDARKRIRPTGIRQFILEVPNVSW---QDIG--GNEELKLEIQQAVIWPQKHPEAFERF 492

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+ P  G+LL+GPPG  KT +AR  A+++ +N   V GPE+ S+  G+SE+A+ ++F  A
Sbjct: 493 GIDPPAGILLYGPPGCSKTLIARALANEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRA 552

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEE---LSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
            Q AP +VF DE+DA+  +R  G E+   +S R++A LL  +DG+ ++  V+++AATNRP
Sbjct: 553 RQVAPTIVFFDEIDAVGSSR--GSEKSSGVSDRVLAQLLTELDGLEKSSRVVLLAATNRP 610

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D ++ AL RPGRLDR I + +              P    R  IL      M+     S 
Sbjct: 611 DQLDSALLRPGRLDRAIYVGL--------------PCEVTRRAILEMRTRKMKFEDPTST 656

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           ++ L   T G+ GA+L A+C  AA+  +R
Sbjct: 657 IQKLVEKTSGYSGAELVAVCRTAAMFAMR 685


>gi|395645342|ref|ZP_10433202.1| AAA family ATPase, CDC48 subfamily [Methanofollis liminatans DSM
            4140]
 gi|395442082|gb|EJG06839.1| AAA family ATPase, CDC48 subfamily [Methanofollis liminatans DSM
            4140]
          Length = 810

 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 156/308 (50%), Positives = 206/308 (66%), Gaps = 21/308 (6%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF++AR  V PSAMREV++EVP V WEDVGG  +VK +L EAVEWP K+ E F 
Sbjct: 422  LRVTAEDFDEARKHVEPSAMREVLVEVPNVSWEDVGGLEDVKAELTEAVEWPLKYPEIFA 481

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+ T+PP GIL+FGPPG  KTL+A+A A+E+  NF++VKGPEL SKWVGESEK VR +F 
Sbjct: 482  RMQTKPPKGILLFGPPGTGKTLLAKATANESECNFISVKGPELLSKWVGESEKGVREIFR 541

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  +PSIIFFDEID L   RG  +D   V++ V+SQLL ELDGL +  +V V+ ATNR
Sbjct: 542  KARQASPSIIFFDEIDALVPKRGSYADSSHVTESVVSQLLTELDGLEELKSVMVLGATNR 601

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP--CSSDVNIRELACLSEGCT 980
            PD +D ALLRPGR DR++YV PP+   R++IF ++L+      +SDV+I +L   S+G  
Sbjct: 602  PDMLDDALLRPGRLDRIVYVPPPDLESRKKIFEVYLKGTEEMMASDVDIDDLVARSDGYV 661

Query: 981  GADISLICREAAISAI------------EENLDA---SRITMQHLKTAIRHVQ----PSE 1021
            GADI  + REA ++A+            EE  DA    R+T +H  TA   V+    P  
Sbjct: 662  GADIEAVVREAKLAAMREFIAAMKDKTAEERTDAIGNVRVTKKHFDTAFGKVKGSLSPES 721

Query: 1022 IHSYKELS 1029
            +  ++ LS
Sbjct: 722  LEEFERLS 729



 Score =  236 bits (603), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 122/267 (45%), Positives = 172/267 (64%), Gaps = 16/267 (5%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            EV  V +ED+GG       + E +E P +H E F+R+G  PP G+L++GPPG  KTL+A+
Sbjct: 175  EVSDVHYEDIGGLGRELDMVREMIELPLRHPEIFERLGIEPPKGVLLYGPPGTGKTLIAK 234

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   NF+++ GPE+  K+ GESE+ +R +F KA+ NAP+I+F DEID +A  R +E
Sbjct: 235  AVANEVDANFISISGPEIMGKYYGESEERLREVFEKAQENAPTIVFIDEIDSIAPKR-EE 293

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            + G  V  RV++QLL  +DGL  R  V VIAATN PD IDPAL R GRFDR + +G P+ 
Sbjct: 294  TKG-EVERRVVAQLLSLMDGLKTRGQVVVIAATNIPDAIDPALRRGGRFDREIEIGIPDR 352

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA---------IEE 998
              R EIF++H R +P +  V+++ LA ++ G  GADISL+ +EAA+ A         IEE
Sbjct: 353  KGRHEIFQVHTRGVPLAESVDLQHLADVTHGFVGADISLLVKEAAMHALRQVIPKIKIEE 412

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             + A      R+T +    A +HV+PS
Sbjct: 413  EIPAELIEKLRVTAEDFDEARKHVEPS 439



 Score =  196 bits (499), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 158/247 (63%), Gaps = 19/247 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++   N
Sbjct: 184 IGGLGRELDMVREMIELPLRHPEIFERLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAN 243

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++ + YGESE+ L EVF+ A ++AP +VFIDE+D+IAP R++   E+ +R+V
Sbjct: 244 FISISGPEIMGKYYGESEERLREVFEKAQENAPTIVFIDEIDSIAPKREETKGEVERRVV 303

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VIAATN PD+I+PALRR GR DREIEI               +
Sbjct: 304 AQLLSLMDGLKTRGQVVVIAATNIPDAIDPALRRGGRFDREIEI--------------GI 349

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRY-SK 649
           P    R EI      G+   L +S ++++L+  THGFVGAD++ L  EAA+  LR+   K
Sbjct: 350 PDRKGRHEIFQVHTRGV--PLAESVDLQHLADVTHGFVGADISLLVKEAAMHALRQVIPK 407

Query: 650 IQTSSDV 656
           I+   ++
Sbjct: 408 IKIEEEI 414



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 138/245 (56%), Gaps = 24/245 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +  +P KG+LL GPPGTGKT LA+  A++S  N  +V GPE++S+  GESE+ + E+
Sbjct: 480 FARMQTKPPKGILLFGPPGTGKTLLAKATANESECNFISVKGPELLSKWVGESEKGVREI 539

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q++P+++F DE+DA+ P R    +   +++ +V+ LL  +DG+     V+V+ AT
Sbjct: 540 FRKARQASPSIIFFDEIDALVPKRGSYADSSHVTESVVSQLLTELDGLEELKSVMVLGAT 599

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGMEHS 611
           NRPD ++ AL RPGRLDR +                 VP P    R +I    L G E  
Sbjct: 600 NRPDMLDDALLRPGRLDRIV----------------YVPPPDLESRKKIFEVYLKGTEEM 643

Query: 612 LL-DSEVEYLSMATHGFVGADLAALCNEAALVCLRRY---SKIQTSSDVLHSTGTLFEFE 667
           +  D +++ L   + G+VGAD+ A+  EA L  +R +    K +T+ +   + G +   +
Sbjct: 644 MASDVDIDDLVARSDGYVGADIEAVVREAKLAAMREFIAAMKDKTAEERTDAIGNVRVTK 703

Query: 668 GHSDT 672
            H DT
Sbjct: 704 KHFDT 708


>gi|374632948|ref|ZP_09705315.1| AAA family ATPase, CDC48 subfamily [Metallosphaera yellowstonensis
            MK1]
 gi|373524432|gb|EHP69309.1| AAA family ATPase, CDC48 subfamily [Metallosphaera yellowstonensis
            MK1]
          Length = 768

 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 137/258 (53%), Positives = 194/258 (75%), Gaps = 1/258 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++++ DF  A  ++ PS MRE+ +EVP+VKW+D+GG  E+K +L E  E+P K  + ++
Sbjct: 432  MEVKMEDFMNAFKEIVPSGMREIYIEVPEVKWDDIGGLNEIKEELREVAEYPLKFPDYYE 491

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 492  MAGVEPPRGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESEKAIREIFR 551

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  APS+IFFDEID +A IRG   D   V++R+++QLL E+DG+    NV ++AATNR
Sbjct: 552  KARMYAPSVIFFDEIDAIAPIRGLSPDS-GVTERLVNQLLAEMDGIENLDNVVIVAATNR 610

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRF++L+YV PP++  R EI R+H +K+  S +VN+ ELA  +EG TGA
Sbjct: 611  PDILDPALLRPGRFEKLMYVPPPDKIARYEILRVHTKKVALSDEVNLEELAERTEGYTGA 670

Query: 983  DISLICREAAISAIEENL 1000
            D++ + REAA+ AI E +
Sbjct: 671  DLAALVREAAMRAIREGM 688



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 120/266 (45%), Positives = 170/266 (63%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V +ED+GG + V  ++ E VE P +H E FKR+G  PP GIL++GPPG  KTL+A+AV
Sbjct: 186  PRVTYEDIGGMKNVIQKIRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAV 245

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DE+D +A  R  E  
Sbjct: 246  ANETESYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEVDAIAPKR-DEVI 304

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R NV VIAATNRP+ +DPAL RPGRFDR + +  P++  
Sbjct: 305  G-EVERRVVAQLLTLMDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQG 363

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R EI +IH R +P + DV + +LA +S G TGAD+S + REAA++A+             
Sbjct: 364  RLEILQIHTRNMPLAKDVELEKLAEISHGYTGADLSALVREAAMNALRRYLPMIDISQDK 423

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L+   + M+    A + + PS
Sbjct: 424  IPPEILERMEVKMEDFMNAFKEIVPS 449



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 140/212 (66%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 217 FKRLGIEPPKGILLYGPPGVGKTLLAKAVANETESYFTSINGPEIMSKFYGESEQRLREI 276

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 277 FEDAKKHAPAIIFIDEVDAIAPKRDEVIGEVERRVVAQLLTLMDGLESRGNVIVIAATNR 336

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREIEI +              P    RLEIL      M  +  D 
Sbjct: 337 PNAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLA-KDV 381

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           E+E L+  +HG+ GADL+AL  EAA+  LRRY
Sbjct: 382 ELEKLAEISHGYTGADLSALVREAAMNALRRY 413



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 159/332 (47%), Gaps = 87/332 (26%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+ P +G+LL GPPGTGKT LA+  A +SG N   V GPEV+S+  GESE+A+ E+F  A
Sbjct: 494 GVEPPRGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESEKAIREIFRKA 553

Query: 500 SQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
              AP+V+F DE+DAIAP R    D G  +++R+V  LL  MDG+   D V+++AATNRP
Sbjct: 554 RMYAPSVIFFDEIDAIAPIRGLSPDSG--VTERLVNQLLAEMDGIENLDNVVIVAATNRP 611

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D ++PAL RPGR ++           L+   P   P    R EIL       +   L  E
Sbjct: 612 DILDPALLRPGRFEK-----------LMYVPP---PDKIARYEILRV---HTKKVALSDE 654

Query: 617 V--EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
           V  E L+  T G+ GADLAAL  EAA+                                 
Sbjct: 655 VNLEELAERTEGYTGADLAALVREAAM--------------------------------- 681

Query: 675 QDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGM 734
                 R I E  RDC++                       VSE+         DS   M
Sbjct: 682 ------RAIREGMRDCVNK----------------------VSEMCPPGDKDCRDSK--M 711

Query: 735 FMSEKGCALKLELVDFEKARMKVRPSAMREVI 766
               KG ++K+E   FE+A  KV+PS  +++I
Sbjct: 712 RDCMKGASIKIENKHFEEALRKVKPSVTQDMI 743


>gi|149238604|ref|XP_001525178.1| protein AFG2 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450671|gb|EDK44927.1| protein AFG2 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 751

 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 138/293 (47%), Positives = 207/293 (70%), Gaps = 6/293 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + D   A  ++RPSAMRE+ LE P+V+W D+GGQ+E+K +L E V+ P +   +F 
Sbjct: 456  IKVTMQDVYDALAEIRPSAMREIFLETPQVRWSDIGGQQELKRKLKEVVQLPLEAASSFA 515

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G + P G+L++GPPGCSKTL A+A+A+E+GLNFLA+KGPE+F+K+VGESE+A+R +F 
Sbjct: 516  NLGVKSPKGVLLYGPPGCSKTLAAKALATESGLNFLAIKGPEIFNKYVGESERAIREMFR 575

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIF DEID +A  R  + DG S S  V++ LL E+DG+ +   V ++ ATN+
Sbjct: 576  KARAAAPSIIFLDEIDAIAGDR--DQDGTSASKNVLTSLLNEIDGVEELKGVVIVGATNK 633

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            P +IDPALLRPGR DR +YV PP+   R +I +   R+     DV++ + A L+ GC+GA
Sbjct: 634  PSEIDPALLRPGRLDRHIYVAPPDLEARLQILKNCSRRFNLGDDVDLNKYAELTSGCSGA 693

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            +++L+C+EA ++AI E+ DA+R+  +H + A+    R++ P  +  Y+  S K
Sbjct: 694  EVTLLCQEAGLNAIMESRDANRVENRHFENALKGISRNISPEMLDYYRAFSRK 746



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/248 (39%), Positives = 149/248 (60%), Gaps = 25/248 (10%)

Query: 408 QDI--SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
           QD+  S +GGL K+  +L+  + +     S  +  G+ P +GVLLHGPPGTGK+ L R  
Sbjct: 214 QDLAYSDIGGLQKQIDVLQSTVELPLHNPSLFTDFGIAPPRGVLLHGPPGTGKSMLLRCV 273

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KD 521
           A +   ++ TV+GP +VS+  GE+E AL  +F+ AS+  PA++ +DE+D++ P+R     
Sbjct: 274 AQNVNAHVLTVSGPSIVSKYLGETENALRSIFEEASKYQPALIMMDEVDSLVPSRDSDDS 333

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
           GG E   R+VATLL +MDG+     V+++ ATNRP+SI+ ALRRPGR D+EIE+      
Sbjct: 334 GGTE--NRVVATLLTMMDGLSYNSQVVIVGATNRPNSIDIALRRPGRFDQEIEV------ 385

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                    +P    R +IL   L  M   + +L   ++  ++  THG+VGADL+ALC E
Sbjct: 386 --------GIPDADSRRDILQKQLDRMNLAKFNLTAEDITEMAAKTHGYVGADLSALCRE 437

Query: 639 AALVCLRR 646
           A +  + R
Sbjct: 438 AVMKAISR 445



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 167/315 (53%), Gaps = 31/315 (9%)

Query: 758  RPSAMREVILEVPK-VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            +PSA +   L  P+ + + D+GG ++    L   VE P  +   F   G  PP G+L+ G
Sbjct: 203  KPSATKYPYL--PQDLAYSDIGGLQKQIDVLQSTVELPLHNPSLFTDFGIAPPRGVLLHG 260

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  K+++ R VA     + L V GP + SK++GE+E A+RS+F +A    P++I  DE
Sbjct: 261  PPGTGKSMLLRCVAQNVNAHVLTVSGPSIVSKYLGETENALRSIFEEASKYQPALIMMDE 320

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            +D L   R  +  G    +RV++ LL  +DGL     V ++ ATNRP+ ID AL RPGRF
Sbjct: 321  VDSLVPSRDSDDSG-GTENRVVATLLTMMDGLSYNSQVVIVGATNRPNSIDIALRRPGRF 379

Query: 937  DRLLYVGPPNETDREEIF-----RIHLRKIPCSSDVNIRELACLSEGCTGADISLICREA 991
            D+ + VG P+   R +I      R++L K   +++ +I E+A  + G  GAD+S +CREA
Sbjct: 380  DQEIEVGIPDADSRRDILQKQLDRMNLAKFNLTAE-DITEMAAKTHGYVGADLSALCREA 438

Query: 992  AISAIEENL------DASRITMQHLKTAIRHVQP---------------SEIHSYKELSA 1030
             + AI   L      +  ++TMQ +  A+  ++P               S+I   +EL  
Sbjct: 439  VMKAISRGLALLLPHNEIKVTMQDVYDALAEIRPSAMREIFLETPQVRWSDIGGQQELKR 498

Query: 1031 KFQRLVHSNAEADES 1045
            K + +V    EA  S
Sbjct: 499  KLKEVVQLPLEAASS 513



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 135/235 (57%), Gaps = 22/235 (9%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    LK+++ +     S+ ++LG++  KGVLL+GPPG  KT  A+  A +SG
Sbjct: 488 SDIGGQQELKRKLKEVVQLPLEAASSFANLGVKSPKGVLLYGPPGCSKTLAAKALATESG 547

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   + GPE+ ++  GESE+A+ E+F  A  +AP+++F+DE+DAIA  R   G   S+ 
Sbjct: 548 LNFLAIKGPEIFNKYVGESERAIREMFRKARAAAPSIIFLDEIDAIAGDRDQDGTSASKN 607

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKN 586
           ++ +LLN +DGV    GV+++ ATN+P  I+PAL RPGRLDR I +   D+     +LKN
Sbjct: 608 VLTSLLNEIDGVEELKGVVIVGATNKPSEIDPALLRPGRLDRHIYVAPPDLEARLQILKN 667

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
                   ++R  +             D ++   +  T G  GA++  LC EA L
Sbjct: 668 C-------SRRFNLGD-----------DVDLNKYAELTSGCSGAEVTLLCQEAGL 704


>gi|386002701|ref|YP_005921000.1| AAA ATPase [Methanosaeta harundinacea 6Ac]
 gi|357210757|gb|AET65377.1| AAA family ATPase, CDC48 subfamily [Methanosaeta harundinacea 6Ac]
          Length = 720

 Score =  303 bits (775), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 150/299 (50%), Positives = 201/299 (67%), Gaps = 15/299 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A   + PSAMREV +EV +V W +VGG    K  L+EAVEWP K+ EAF  IG RP
Sbjct: 421  DFRFALKMIEPSAMREVFVEVAEVHWYEVGGLDRAKEDLVEAVEWPLKYPEAFDSIGIRP 480

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+FGPPG  KTL+A+AVA+E+G+NF++VKGPEL SKWVGESE+AVR +F KA+  A
Sbjct: 481  PRGVLLFGPPGTGKTLLAKAVATESGVNFISVKGPELLSKWVGESERAVREVFRKAKQAA 540

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PS+IFFDE+D +   RG   D    ++RV+SQ L ELDG+ +  +V V+AATNRPD +DP
Sbjct: 541  PSLIFFDEVDAVVPARGSGLDS-HATERVVSQFLTELDGVVELKDVVVLAATNRPDLLDP 599

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            +LLRPGRFDRL+ +  P+   RE IF IHL  +P + DV+   LA ++EG TGADI  +C
Sbjct: 600  SLLRPGRFDRLIRIPIPDRVARERIFEIHLSGMPLAGDVSASRLAEVTEGWTGADIETLC 659

Query: 989  REAAISAIEEN-----------LDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLV 1036
            REA ++A+ E            L   ++  +H + A    +P   H   E++A +QRL+
Sbjct: 660  REAGMTALREKILPGMRREELILQGVQVEGRHFREAFERAKP---HLTPEMAADYQRLM 715



 Score =  219 bits (558), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 117/284 (41%), Positives = 174/284 (61%), Gaps = 26/284 (9%)

Query: 767  LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            + V  V +ED+GG  +    + E +E P +H E F+R+G RPP G+L+FGPPG  KTL+A
Sbjct: 167  MAVRDVSYEDIGGLGKEIRMVREMIELPLRHPEIFERLGIRPPQGLLLFGPPGTGKTLIA 226

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            RAVASE   NF+++ GPE+ SK+ GESEK +R +F +A  +APSI+F DEID +A  R  
Sbjct: 227  RAVASETEANFISISGPEITSKFYGESEKRLREIFEEAERSAPSIVFIDEIDSIAPKR-- 284

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E     +  RV++QLL  +DGL  R  V VIAATNRP+ +DPA+ R GRFDR + +G P+
Sbjct: 285  EEVAGDLERRVVAQLLSLMDGLAYRGEVIVIAATNRPNSLDPAIRRGGRFDREMEIGIPD 344

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---ENLDAS 1003
            +  R EI  +H R +P S DV++  +A  + G  GAD++ +C+EAA+  ++    +LDA 
Sbjct: 345  KNGRLEILYVHTRGMPLSEDVDLEGIAERTHGFVGADLASLCKEAAMHTLKGLIPDLDAE 404

Query: 1004 R-----------ITMQHLKTAIRHVQPS----------EIHSYK 1026
                        +  +  + A++ ++PS          E+H Y+
Sbjct: 405  EAIPLRVLEELVVAEEDFRFALKMIEPSAMREVFVEVAEVHWYE 448



 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/258 (44%), Positives = 170/258 (65%), Gaps = 22/258 (8%)

Query: 395 AQIEFQNVQATVEQ----DIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGV 447
           A+ E + ++ T+E+    D+S   +GGL KE  +++++I +          LG+RP +G+
Sbjct: 153 AETEIKILKDTLEEMAVRDVSYEDIGGLGKEIRMVREMIELPLRHPEIFERLGIRPPQGL 212

Query: 448 LLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVV 507
           LL GPPGTGKT +AR  A ++  N  +++GPE+ S+ YGESE+ L E+F+ A +SAP++V
Sbjct: 213 LLFGPPGTGKTLIARAVASETEANFISISGPEITSKFYGESEKRLREIFEEAERSAPSIV 272

Query: 508 FIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPG 567
           FIDE+D+IAP R++   +L +R+VA LL+LMDG+     V+VIAATNRP+S++PA+RR G
Sbjct: 273 FIDEIDSIAPKREEVAGDLERRVVAQLLSLMDGLAYRGEVIVIAATNRPNSLDPAIRRGG 332

Query: 568 RLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGF 627
           R DRE+EI               +P    RLEIL+    GM  S  D ++E ++  THGF
Sbjct: 333 RFDREMEI--------------GIPDKNGRLEILYVHTRGMPLS-EDVDLEGIAERTHGF 377

Query: 628 VGADLAALCNEAALVCLR 645
           VGADLA+LC EAA+  L+
Sbjct: 378 VGADLASLCKEAAMHTLK 395



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 128/211 (60%), Gaps = 16/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             S+G+RP +GVLL GPPGTGKT LA+  A +SGVN  +V GPE++S+  GESE+A+ EV
Sbjct: 473 FDSIGIRPPRGVLLFGPPGTGKTLLAKAVATESGVNFISVKGPELLSKWVGESERAVREV 532

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q+AP+++F DE+DA+ PAR  G +   ++R+V+  L  +DGV     V+V+AATN
Sbjct: 533 FRKAKQAAPSLIFFDEVDAVVPARGSGLDSHATERVVSQFLTELDGVVELKDVVVLAATN 592

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD ++P+L RPGR DR I I               +P    R  I    LSGM  +  D
Sbjct: 593 RPDLLDPSLLRPGRFDRLIRI--------------PIPDRVARERIFEIHLSGMPLA-GD 637

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                L+  T G+ GAD+  LC EA +  LR
Sbjct: 638 VSASRLAEVTEGWTGADIETLCREAGMTALR 668


>gi|150866631|ref|XP_001386295.2| AAA+-type ATPase [Scheffersomyces stipitis CBS 6054]
 gi|149387887|gb|ABN68266.2| AAA+-type ATPase [Scheffersomyces stipitis CBS 6054]
          Length = 788

 Score =  303 bits (775), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 140/276 (50%), Positives = 204/276 (73%), Gaps = 3/276 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ L D  +A  ++RPSAMRE+ LE+PKV W D+GGQ E+K +LME V+ P +  ++FK
Sbjct: 490  LKVNLQDLTEALPEIRPSAMREIFLEMPKVFWSDIGGQHELKQKLMEVVQLPLEAADSFK 549

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G   P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+F+K+VGESE+A+R +F 
Sbjct: 550  ALGVSAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFR 609

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIFFDEID ++  R  ES   S S  V++ LL E+DG+ +   V ++AATN+
Sbjct: 610  KARAAAPSIIFFDEIDAISGDR--ESASTSASQHVLTSLLNEIDGVEELKGVVIVAATNK 667

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTG 981
            P +IDPALLRPGR DR +YV PP+   R +I +   +K      DV++ ELA L++GC+G
Sbjct: 668  PTEIDPALLRPGRLDRHIYVAPPDYEARLQILKNGSKKFNIVPEDVDLSELALLTDGCSG 727

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHV 1017
            A+++L+C+EA ++A+ E+ +AS +  +H + A++ +
Sbjct: 728  AEVALVCQEAGLAAVMESRNASTVQKKHFEHALKGI 763



 Score =  189 bits (481), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 97/246 (39%), Positives = 152/246 (61%), Gaps = 19/246 (7%)

Query: 406 VEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
           V+   + +GGLSK+ A+L+  + +  +  +  S  G+ P +G+LLHGPPGTGKT L R  
Sbjct: 248 VQIGYANIGGLSKQVALLQSTVELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCV 307

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-DGG 523
           A ++  ++ T+NGP +VS+  GE+E A+ ++F  A +  P+++F+DE+D++ P+R  D  
Sbjct: 308 ASETNAHILTINGPSIVSKYLGETENAIRDIFIEARKYQPSIIFMDEIDSLVPSRNSDDS 367

Query: 524 EELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSL 583
            E   R+VATLL +MDG+  +  ++V+AATNRP+SI+ ALRRPGR D+E+EI        
Sbjct: 368 GETESRVVATLLTMMDGMGDSGRIVVVAATNRPNSIDAALRRPGRFDQEVEI-------- 419

Query: 584 LKNSPAAVPSPAQRLEILHALLSGMEHS---LLDSEVEYLSMATHGFVGADLAALCNEAA 640
                  +P    R +IL    + M  S   L + ++  ++  THG+VGADL ALC EA 
Sbjct: 420 ------GIPDVDARTDILLKQFAKMNASKCDLSEDDITLVASKTHGYVGADLTALCREAV 473

Query: 641 LVCLRR 646
           +  + R
Sbjct: 474 MKAIGR 479



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 158/300 (52%), Gaps = 26/300 (8%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ + ++GG  +    L   VE P  +   F   G  PP GIL+ GPPG  KT++ R VA
Sbjct: 249  QIGYANIGGLSKQVALLQSTVELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVA 308

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE   + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID L   R  +  G
Sbjct: 309  SETNAHILTINGPSIVSKYLGETENAIRDIFIEARKYQPSIIFMDEIDSLVPSRNSDDSG 368

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
             + S RV++ LL  +DG+     + V+AATNRP+ ID AL RPGRFD+ + +G P+   R
Sbjct: 369  ETES-RVVATLLTMMDGMGDSGRIVVVAATNRPNSIDAALRRPGRFDQEVEIGIPDVDAR 427

Query: 951  EEIFRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             +I      K+  S    S+ +I  +A  + G  GAD++ +CREA + AI   L A    
Sbjct: 428  TDILLKQFAKMNASKCDLSEDDITLVASKTHGYVGADLTALCREAVMKAIGRGLKAGIAQ 487

Query: 1004 ---RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADES 1045
               ++ +Q L  A+  ++P               S+I    EL  K   +V    EA +S
Sbjct: 488  TQLKVNLQDLTEALPEIRPSAMREIFLEMPKVFWSDIGGQHELKQKLMEVVQLPLEAADS 547



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 126/220 (57%), Gaps = 17/220 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           +  +LG+   KGVLL+GPPG  KT  A+  A +SG+N   V GPE+ ++  GESE+A+ E
Sbjct: 547 SFKALGVSAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIRE 606

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F  A  +AP+++F DE+DAI+  R+      SQ ++ +LLN +DGV    GV+++AATN
Sbjct: 607 IFRKARAAAPSIIFFDEIDAISGDRESASTSASQHVLTSLLNEIDGVEELKGVVIVAATN 666

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           +P  I+PAL RPGRLDR I +              A P    RL+IL            D
Sbjct: 667 KPTEIDPALLRPGRLDRHIYV--------------APPDYEARLQILKNGSKKFNIVPED 712

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCL---RRYSKIQ 651
            ++  L++ T G  GA++A +C EA L  +   R  S +Q
Sbjct: 713 VDLSELALLTDGCSGAEVALVCQEAGLAAVMESRNASTVQ 752


>gi|312086086|ref|XP_003144939.1| ATPase [Loa loa]
          Length = 737

 Score =  302 bits (774), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 137/285 (48%), Positives = 206/285 (72%), Gaps = 1/285 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A  +V P+ +R+ +L+VP V WED+GG RE+K ++ +AV WP ++ E FKR  ++PP
Sbjct: 447  FDVALKRVHPTGIRQFVLQVPDVNWEDIGGNRELKMKIEQAVLWPYRYPEIFKRFASKPP 506

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
            +GIL++GPPGCSKTL+ARA+AS++ +NFLAVKGPELFSKWVGESE+AVR LF +AR  AP
Sbjct: 507  SGILLYGPPGCSKTLIARAIASQSRMNFLAVKGPELFSKWVGESERAVRELFRRARQVAP 566

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
            +IIFFDEID + A RG  ++   V +RV++QLL ELDGL ++ +V V+AATNRPD++D A
Sbjct: 567  AIIFFDEIDAVGANRGDRNES-HVGERVLTQLLTELDGLEEKGDVMVLAATNRPDRLDSA 625

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            LLRPGRF+  ++V  P+E  R EI RI L  +  + D+++ ++   ++G +GA++  +C 
Sbjct: 626  LLRPGRFNLTIHVPLPDEETRLEILRIRLNHMKVNVDLDVEDIGKRTKGFSGAEVVELCD 685

Query: 990  EAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            +A   A+ EN DA ++  +H   A++ + P   +   ++  +F+R
Sbjct: 686  QAVREALLENRDADKLEFRHFHQALKEIMPRTPNWLLDIYKEFKR 730



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 117/200 (58%), Gaps = 16/200 (8%)

Query: 442 RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
           +P  G+LL+GPPG  KT +AR  A  S +N   V GPE+ S+  GESE+A+ E+F  A Q
Sbjct: 504 KPPSGILLYGPPGCSKTLIARAIASQSRMNFLAVKGPELFSKWVGESERAVRELFRRARQ 563

Query: 502 SAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
            APA++F DE+DA+   R D  E  + +R++  LL  +DG+     V+V+AATNRPD ++
Sbjct: 564 VAPAIIFFDEIDAVGANRGDRNESHVGERVLTQLLTELDGLEEKGDVMVLAATNRPDRLD 623

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
            AL RPGR +  I + +              P    RLEIL   L+ M+ + +D +VE +
Sbjct: 624 SALLRPGRFNLTIHVPL--------------PDEETRLEILRIRLNHMKVN-VDLDVEDI 668

Query: 621 SMATHGFVGADLAALCNEAA 640
              T GF GA++  LC++A 
Sbjct: 669 GKRTKGFSGAEVVELCDQAV 688


>gi|170059232|ref|XP_001865273.1| AFG2 [Culex quinquefasciatus]
 gi|167878101|gb|EDS41484.1| AFG2 [Culex quinquefasciatus]
          Length = 783

 Score =  302 bits (774), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 143/267 (53%), Positives = 191/267 (71%), Gaps = 1/267 (0%)

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            A   V+ SAMRE+++E P V W D+GGQ ++K +L + +EWP    E F R+G  PP G+
Sbjct: 499  ALQHVKASAMREIMIENPNVHWADIGGQDDLKLKLRQIIEWPIHRPEIFTRLGISPPRGL 558

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            LMFGPPGCSKT++A+A+A+E+ +NFL++KG ELFS WVGESE+AVR LF KAR  APSII
Sbjct: 559  LMFGPPGCSKTMIAKAIATESKVNFLSIKGSELFSMWVGESERAVRELFRKARQVAPSII 618

Query: 873  FFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLR 932
            FFDEID +   R  ES G SV +RV++Q+L E+DG+    NV +IAATNRPD ID AL+R
Sbjct: 619  FFDEIDAIGGERSAES-GSSVRERVLAQILTEIDGVSALKNVKIIAATNRPDLIDKALMR 677

Query: 933  PGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAA 992
            PGR DR++YV  P+   R+EIFRI L KIP S+DV   +L   +EG +G++I  IC+EAA
Sbjct: 678  PGRLDRIIYVRLPDFATRKEIFRIKLSKIPISADVQQDDLVARTEGYSGSEIEAICQEAA 737

Query: 993  ISAIEENLDASRITMQHLKTAIRHVQP 1019
            + A+EE+ D   I  +    A+  V+P
Sbjct: 738  LKALEESFDTLEIPQKFFDHALNVVKP 764



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 121/210 (57%), Gaps = 16/210 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG+ P +G+L+ GPPG  KT +A+  A +S VN  ++ G E+ S   GESE+A+ E+
Sbjct: 547 FTRLGISPPRGLLMFGPPGCSKTMIAKAIATESKVNFLSIKGSELFSMWVGESERAVREL 606

Query: 496 FDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q AP+++F DE+DAI   R  + G  + +R++A +L  +DGV     V +IAATN
Sbjct: 607 FRKARQVAPSIIFFDEIDAIGGERSAESGSSVRERVLAQILTEIDGVSALKNVKIIAATN 666

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+ AL RPGRLDR I + +              P  A R EI    LS +  S  D
Sbjct: 667 RPDLIDKALMRPGRLDRIIYVRL--------------PDFATRKEIFRIKLSKIPIS-AD 711

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCL 644
            + + L   T G+ G+++ A+C EAAL  L
Sbjct: 712 VQQDDLVARTEGYSGSEIEAICQEAALKAL 741



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 28/241 (11%)

Query: 410 ISKLGGLSKEYAILKDII-----ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
           +  +GGL      LK+I      IS    +T S + +  ++GVL++G  GTGKT L    
Sbjct: 262 LDSIGGLETVIGELKEITKLALGISKPTSTTHSDVPI--SRGVLVYGVSGTGKTLLVNSL 319

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS--APAVVFIDELDAIAPARKDG 522
           A         +N  EV S+ YGESE  + ++F+ A Q+  +P ++ ++E+  I P  K  
Sbjct: 320 AAHFKCKTVRINCSEVFSKFYGESEGNVSKLFNKALQNYPSPTIIIVEEMHNICP--KAE 377

Query: 523 GEELSQRMVATLLNLMDGV---CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSF 579
             ++ +R+    +NL+D +    R    ++I  T+ PDS+ PA+RR GRLD E EI    
Sbjct: 378 ASDIVKRLSNFFVNLLDNLNSSVRGSRTVLIGTTDNPDSLNPAVRRSGRLDYEFEI---- 433

Query: 580 LFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
                      +P    R +IL   L+  +H+L   E++ ++  THG+VGADL +L   A
Sbjct: 434 ----------PIPDADAREQILLKSLTLQKHALHPDEIKSIAKVTHGYVGADLVSLVGRA 483

Query: 640 A 640
           +
Sbjct: 484 S 484



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            G+L++G  G  KTL+  ++A+      + +   E+FSK+ GESE  V  LF KA  N PS
Sbjct: 301  GVLVYGVSGTGKTLLVNSLAAHFKCKTVRINCSEVFSKFYGESEGNVSKLFNKALQNYPS 360

Query: 871  --IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
              II  +E+  +   + + SD V         LL  L+   +     +I  T+ PD ++P
Sbjct: 361  PTIIIVEEMHNICP-KAEASDIVKRLSNFFVNLLDNLNSSVRGSRTVLIGTTDNPDSLNP 419

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIF--RIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            A+ R GR D    +  P+   RE+I    + L+K     D  I+ +A ++ G  GAD+  
Sbjct: 420  AVRRSGRLDYEFEIPIPDADAREQILLKSLTLQKHALHPD-EIKSIAKVTHGYVGADLVS 478

Query: 987  ICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            +   A+  A       + IT   + +A++HV+ S
Sbjct: 479  LVGRASHEA------KATITYASMASALQHVKAS 506


>gi|393906311|gb|EFO19130.2| ATPase [Loa loa]
          Length = 699

 Score =  302 bits (774), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 137/285 (48%), Positives = 206/285 (72%), Gaps = 1/285 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A  +V P+ +R+ +L+VP V WED+GG RE+K ++ +AV WP ++ E FKR  ++PP
Sbjct: 409  FDVALKRVHPTGIRQFVLQVPDVNWEDIGGNRELKMKIEQAVLWPYRYPEIFKRFASKPP 468

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
            +GIL++GPPGCSKTL+ARA+AS++ +NFLAVKGPELFSKWVGESE+AVR LF +AR  AP
Sbjct: 469  SGILLYGPPGCSKTLIARAIASQSRMNFLAVKGPELFSKWVGESERAVRELFRRARQVAP 528

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
            +IIFFDEID + A RG  ++   V +RV++QLL ELDGL ++ +V V+AATNRPD++D A
Sbjct: 529  AIIFFDEIDAVGANRGDRNES-HVGERVLTQLLTELDGLEEKGDVMVLAATNRPDRLDSA 587

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            LLRPGRF+  ++V  P+E  R EI RI L  +  + D+++ ++   ++G +GA++  +C 
Sbjct: 588  LLRPGRFNLTIHVPLPDEETRLEILRIRLNHMKVNVDLDVEDIGKRTKGFSGAEVVELCD 647

Query: 990  EAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            +A   A+ EN DA ++  +H   A++ + P   +   ++  +F+R
Sbjct: 648  QAVREALLENRDADKLEFRHFHQALKEIMPRTPNWLLDIYKEFKR 692



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 117/200 (58%), Gaps = 16/200 (8%)

Query: 442 RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
           +P  G+LL+GPPG  KT +AR  A  S +N   V GPE+ S+  GESE+A+ E+F  A Q
Sbjct: 466 KPPSGILLYGPPGCSKTLIARAIASQSRMNFLAVKGPELFSKWVGESERAVRELFRRARQ 525

Query: 502 SAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
            APA++F DE+DA+   R D  E  + +R++  LL  +DG+     V+V+AATNRPD ++
Sbjct: 526 VAPAIIFFDEIDAVGANRGDRNESHVGERVLTQLLTELDGLEEKGDVMVLAATNRPDRLD 585

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
            AL RPGR +  I + +              P    RLEIL   L+ M+ + +D +VE +
Sbjct: 586 SALLRPGRFNLTIHVPL--------------PDEETRLEILRIRLNHMKVN-VDLDVEDI 630

Query: 621 SMATHGFVGADLAALCNEAA 640
              T GF GA++  LC++A 
Sbjct: 631 GKRTKGFSGAEVVELCDQAV 650


>gi|336366196|gb|EGN94544.1| hypothetical protein SERLA73DRAFT_77916 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336378867|gb|EGO20024.1| hypothetical protein SERLADRAFT_442825 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 781

 Score =  302 bits (774), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 141/297 (47%), Positives = 207/297 (69%), Gaps = 5/297 (1%)

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
            G  L L L D   +   VRPS MR +  E P V++ D+GGQ  V  +L EAVEWP  H +
Sbjct: 479  GDGLLLNLTDILDSLPSVRPSGMRSLFFETPPVRYADIGGQGAVIQKLREAVEWPLLHPQ 538

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
            AF+R+G RPP G+L++GPPGCSKT++ARA A E+G+NF+AVKGPEL +K+VGESE+AVR 
Sbjct: 539  AFERLGIRPPKGVLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKFVGESERAVRE 598

Query: 860  LFAKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIA 918
            +F KARA +PSIIFFDEID L   R   +S G    + V++ LL E+DG+ + V VTVIA
Sbjct: 599  IFRKARAASPSIIFFDEIDALGTSRTSADSSGGGPHEGVLTSLLNEMDGVQELVGVTVIA 658

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEG 978
            ATNRPD ID AL+RPGR DR++YVGPP++  RE+I  I  RK+    +++++++A +++G
Sbjct: 659  ATNRPDVIDSALMRPGRLDRIMYVGPPDQAGREDILAIRTRKMSVEPNLDVKQIAAMTDG 718

Query: 979  CTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            C+GA+I+ +C+EAA+  ++++++A  ++     +A     + + P  +  Y++   K
Sbjct: 719  CSGAEITALCQEAALLTMKKDINAPYVSQDAFISAANALQKQITPEVVRKYEDWQEK 775



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 129/213 (60%), Gaps = 22/213 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+RP KGVLL+GPPG  KT LAR CA +SGVN   V GPE++++  GESE+A+ E+F  
Sbjct: 543 LGIRPPKGVLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKFVGESERAVREIFRK 602

Query: 499 ASQSAPAVVFIDELDAIAPARKDG---GEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A  ++P+++F DE+DA+  +R      G    + ++ +LLN MDGV    GV VIAATNR
Sbjct: 603 ARAASPSIIFFDEIDALGTSRTSADSSGGGPHEGVLTSLLNEMDGVQELVGVTVIAATNR 662

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLL 613
           PD I+ AL RPGRLDR + +                P  A R +IL      M  E +L 
Sbjct: 663 PDVIDSALMRPGRLDRIMYV--------------GPPDQAGREDILAIRTRKMSVEPNL- 707

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             +V+ ++  T G  GA++ ALC EAAL+ +++
Sbjct: 708 --DVKQIAAMTDGCSGAEITALCQEAALLTMKK 738



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 133/254 (52%), Gaps = 39/254 (15%)

Query: 403 QATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           ++T     + +GGL +    ++D++ I  +        GL+P +G+LLHGPPGTGKT LA
Sbjct: 254 KSTASDAYASVGGLDRTITQIRDLLEIPLTRPELFGYFGLKPPRGILLHGPPGTGKTHLA 313

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
           R  A  +  ++  +NGPE+ S  +GE+E  L +VF  A + +P +V +DE+DA+ P R++
Sbjct: 314 RAIASSTNSSVIIINGPELSSAYHGETESKLRDVFRDAREKSPCIVVLDEVDALVPRREE 373

Query: 522 G-GEELSQRMVATLLNLMDGV-CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSF 579
           G G E+ +R+VATLL L+DG+    +G   +     PD               IE   S 
Sbjct: 374 GAGGEVEKRVVATLLTLLDGMEDEANGKGRVVVIGIPD---------------IEARSSI 418

Query: 580 LFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
           L  LL N+P                     HSL + ++  ++   HG+VGADL+A+  EA
Sbjct: 419 LKVLLANAP---------------------HSLSEQDIHTIASRAHGYVGADLSAVVREA 457

Query: 640 ALVCLRRYSKIQTS 653
             + ++R+  +  S
Sbjct: 458 GTLAIKRWISVNPS 471



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 114/225 (50%), Gaps = 23/225 (10%)

Query: 774 WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
           +  VGG     TQ+ + +E P    E F   G +PP GIL+ GPPG  KT +ARA+AS  
Sbjct: 261 YASVGGLDRTITQIRDLLEIPLTRPELFGYFGLKPPRGILLHGPPGTGKTHLARAIASST 320

Query: 834 GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
             + + + GPEL S + GE+E  +R +F  AR  +P I+  DE+D L   R +E  G  V
Sbjct: 321 NSSVIIINGPELSSAYHGETESKLRDVFRDAREKSPCIVVLDEVDALVP-RREEGAGGEV 379

Query: 894 SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
             RV++ LL  LDG+    N                    G+  R++ +G P+   R  I
Sbjct: 380 EKRVVATLLTLLDGMEDEAN--------------------GK-GRVVVIGIPDIEARSSI 418

Query: 954 FRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIE 997
            ++ L   P S S+ +I  +A  + G  GAD+S + REA   AI+
Sbjct: 419 LKVLLANAPHSLSEQDIHTIASRAHGYVGADLSAVVREAGTLAIK 463


>gi|146304983|ref|YP_001192299.1| AAA ATPase [Metallosphaera sedula DSM 5348]
 gi|145703233|gb|ABP96375.1| AAA family ATPase, CDC48 subfamily [Metallosphaera sedula DSM 5348]
          Length = 760

 Score =  302 bits (773), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 137/256 (53%), Positives = 189/256 (73%), Gaps = 1/256 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   V+P+ +REV +EVP+V+W ++GG   VK QL EA+EWP +  E F 
Sbjct: 429 LKVTMDDFMNAMKFVQPTLLREVYVEVPRVRWSEIGGLENVKQQLREAIEWPMRFPEVFN 488

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           + G RPP G+L+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 489 KAGIRPPKGVLLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESEKAIREIFK 548

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           +AR  AP+++FFDEID +A +RG   D   V++R+++QLL E+DG+     V VIAATNR
Sbjct: 549 RARQTAPTVVFFDEIDSIAPMRGMGHDS-GVTERMVNQLLSEMDGIVPLSKVVVIAATNR 607

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD IDPALLRPGRFDRL+YV PP++  R EI ++H + +P S DVN+  LA  +EG TGA
Sbjct: 608 PDIIDPALLRPGRFDRLIYVPPPDKQARLEILKVHTKSVPLSPDVNLEALAEKTEGYTGA 667

Query: 983 DISLICREAAISAIEE 998
           D+  + REA + ++ E
Sbjct: 668 DLEALVREATMISLRE 683



 Score =  242 bits (618), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 121/270 (44%), Positives = 169/270 (62%), Gaps = 21/270 (7%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V WED+G   EVK +L E +E P KH E F+ +G  PP G+L++GPPG  KTL+ARA+
Sbjct: 179  PRVTWEDIGDLDEVKEKLREMIELPMKHPELFQHLGIEPPKGVLLYGPPGVGKTLLARAL 238

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E G  F+ + GPE+ SK+ GESE+ +R +F  A  NAPSIIF DEID +A  R +E  
Sbjct: 239  ANEIGAYFVTINGPEIMSKFYGESEQRLREIFDDADKNAPSIIFIDEIDAIAPKR-EEVT 297

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV+SQLL  +DG+  R  + VI ATNRPD +D AL RPGRFDR + + PP+   
Sbjct: 298  G-EVEKRVVSQLLTLMDGIKGRGRIVVIGATNRPDAVDQALRRPGRFDREIEIRPPDTKA 356

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R+EI ++H R +P + DVN+  +A ++ G TGADI+ + +EAA+ A+             
Sbjct: 357  RKEILQVHTRNMPLADDVNLDVIAEMTNGYTGADIAALAKEAAMHALRRFINTGDRKKLL 416

Query: 998  -------ENLDASRITMQHLKTAIRHVQPS 1020
                   E L   ++TM     A++ VQP+
Sbjct: 417  EQERLSPEVLKELKVTMDDFMNAMKFVQPT 446



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 138/212 (65%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL+GPPG GKT LAR  A++ G    T+NGPE++S+ YGESEQ L E+
Sbjct: 210 FQHLGIEPPKGVLLYGPPGVGKTLLARALANEIGAYFVTINGPEIMSKFYGESEQRLREI 269

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           FD A ++AP+++FIDE+DAIAP R++   E+ +R+V+ LL LMDG+     ++VI ATNR
Sbjct: 270 FDDADKNAPSIIFIDEIDAIAPKREEVTGEVEKRVVSQLLTLMDGIKGRGRIVVIGATNR 329

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++ ALRRPGR DREIEI            P   P    R EIL      M  +  D 
Sbjct: 330 PDAVDQALRRPGRFDREIEI-----------RP---PDTKARKEILQVHTRNMPLA-DDV 374

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            ++ ++  T+G+ GAD+AAL  EAA+  LRR+
Sbjct: 375 NLDVIAEMTNGYTGADIAALAKEAAMHALRRF 406



 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/294 (41%), Positives = 162/294 (55%), Gaps = 35/294 (11%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S++GGL      L++ I          +  G+RP KGVLL GPPGTGKT LA+  A +SG
Sbjct: 461 SEIGGLENVKQQLREAIEWPMRFPEVFNKAGIRPPKGVLLFGPPGTGKTMLAKAVATESG 520

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE-LSQ 528
            N   V GPEV+S+  GESE+A+ E+F  A Q+AP VVF DE+D+IAP R  G +  +++
Sbjct: 521 ANFIAVRGPEVLSKWVGESEKAIREIFKRARQTAPTVVFFDEIDSIAPMRGMGHDSGVTE 580

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           RMV  LL+ MDG+     V+VIAATNRPD I+PAL RPGR DR I               
Sbjct: 581 RMVNQLLSEMDGIVPLSKVVVIAATNRPDIIDPALLRPGRFDRLI--------------- 625

Query: 589 AAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             VP P +  RLEIL      +  S  D  +E L+  T G+ GADL AL  EA ++ LR 
Sbjct: 626 -YVPPPDKQARLEILKVHTKSVPLS-PDVNLEALAEKTEGYTGADLEALVREATMISLRE 683

Query: 647 -YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTS 699
            YSK  TS+          E E  +      ++C   + +S   C+DS +P  +
Sbjct: 684 IYSKCNTSA----------EKECKNAKGDGATECYNRVIKS---CIDSNAPNVT 724


>gi|240103779|ref|YP_002960088.1| AAA family ATPase [Thermococcus gammatolerans EJ3]
 gi|239911333|gb|ACS34224.1| AAA family ATPase, CDC48 subfamily (Cdc48) [Thermococcus
            gammatolerans EJ3]
          Length = 838

 Score =  302 bits (773), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 144/294 (48%), Positives = 206/294 (70%), Gaps = 17/294 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF +A   V PSA+REV++EVP V+W+D+GG  +VK +L EAVEWP K+ +AF+
Sbjct: 514  LRVREEDFYEALKMVEPSALREVLIEVPNVRWDDIGGLEDVKQELREAVEWPLKYPKAFE 573

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  PP GIL++GPPG  KTL+A+AVA+E+  NF+A++GPE+ SKWVGE+EK +R +F 
Sbjct: 574  RLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIRGPEVLSKWVGETEKRIREIFR 633

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+++F DEID +A  RG    G  + D +++QLL E+DG+ +   V VI ATNR
Sbjct: 634  KARQAAPTVVFIDEIDAIAPARGSYEGGRHL-DTLINQLLTEMDGIQENSGVVVIGATNR 692

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDRL+ V  P+E  R EIF++H R++P + DV++ ELA  +EG +GA
Sbjct: 693  PDIIDPALLRPGRFDRLILVPAPDEKARLEIFKVHTRRVPLAEDVDLAELAKKTEGYSGA 752

Query: 983  DISLICREAAISAI----------------EENLDASRITMQHLKTAIRHVQPS 1020
            DI  + REAA+ A+                EE L++ +++ +  + A+R V+PS
Sbjct: 753  DIEALVREAALIALRRAVSRLPREIVEKQGEEFLESLKVSRRDFEMALRKVKPS 806



 Score =  215 bits (548), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 107/213 (50%), Positives = 145/213 (68%), Gaps = 2/213 (0%)

Query: 769 VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
           +P+V +ED+GG  +   ++ E VE P KH E F+R+G  PP G+L++GPPG  KTL+A+A
Sbjct: 205 IPEVTYEDIGGLSDAIQKIREMVELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLLAKA 264

Query: 829 VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
           VA+EA  +F+A+ GPE+ SK+ GESE+ +R +F +A  NAPSIIF DEID +A  R +E 
Sbjct: 265 VANEANAHFIAINGPEIMSKFYGESEERLREIFKEAEENAPSIIFIDEIDAIAPKR-EEV 323

Query: 889 DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
            G  V  RV+SQLL  +DGL  R  V VIAATNRPD IDPAL RPGRFDR + VG P++ 
Sbjct: 324 VG-EVEKRVVSQLLTLMDGLKGRGKVIVIAATNRPDAIDPALRRPGRFDREIEVGVPDKQ 382

Query: 949 DREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            R+EI +IH R +P     +  E+  + +   G
Sbjct: 383 GRKEILQIHTRGMPLEPSFDKEEVLTVLDRLAG 415



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 116/303 (38%), Positives = 171/303 (56%), Gaps = 50/303 (16%)

Query: 391 TLPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
            LP A ++  +++     +DI   GGLS     +++++ +          LG+ P KGVL
Sbjct: 193 VLPQAVEVREESIPEVTYEDI---GGLSDAIQKIREMVELPLKHPELFERLGIEPPKGVL 249

Query: 449 LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
           L+GPPGTGKT LA+  A+++  +   +NGPE++S+ YGESE+ L E+F  A ++AP+++F
Sbjct: 250 LYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKFYGESEERLREIFKEAEENAPSIIF 309

Query: 509 IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
           IDE+DAIAP R++   E+ +R+V+ LL LMDG+     V+VIAATNRPD+I+PALRRPGR
Sbjct: 310 IDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKGRGKVIVIAATNRPDAIDPALRRPGR 369

Query: 569 LDREIEI---DMSFLFSLLKNSPAAVP--------------------------------- 592
            DREIE+   D      +L+     +P                                 
Sbjct: 370 FDREIEVGVPDKQGRKEILQIHTRGMPLEPSFDKEEVLTVLDRLAGRTDKFAEEVAGIRP 429

Query: 593 --SPAQRLEILHALL-------SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
               AQ  E +  +L       S ++  L+D  ++ ++  THGFVGADLAAL  EAA+V 
Sbjct: 430 LIEAAQSEEEIKGILKKNGELYSEVKAKLIDRMLDRIADRTHGFVGADLAALAREAAMVV 489

Query: 644 LRR 646
           LRR
Sbjct: 490 LRR 492



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/217 (45%), Positives = 130/217 (59%), Gaps = 22/217 (10%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                LG+ P KG+LL+GPPGTGKT LA+  A++S  N   + GPEV+S+  GE+E+ + 
Sbjct: 570 KAFERLGITPPKGILLYGPPGTGKTLLAKAVANESEANFIAIRGPEVLSKWVGETEKRIR 629

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           E+F  A Q+AP VVFIDE+DAIAPAR   +GG  L   ++  LL  MDG+    GV+VI 
Sbjct: 630 EIFRKARQAAPTVVFIDEIDAIAPARGSYEGGRHLDT-LINQLLTEMDGIQENSGVVVIG 688

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGME 609
           ATNRPD I+PAL RPGR DR I                 VP+P +  RLEI       + 
Sbjct: 689 ATNRPDIIDPALLRPGRFDRLI----------------LVPAPDEKARLEIFKVHTRRVP 732

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            +  D ++  L+  T G+ GAD+ AL  EAAL+ LRR
Sbjct: 733 LA-EDVDLAELAKKTEGYSGADIEALVREAALIALRR 768


>gi|374629733|ref|ZP_09702118.1| AAA family ATPase, CDC48 subfamily [Methanoplanus limicola DSM 2279]
 gi|373907846|gb|EHQ35950.1| AAA family ATPase, CDC48 subfamily [Methanoplanus limicola DSM 2279]
          Length = 832

 Score =  302 bits (773), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 146/293 (49%), Positives = 205/293 (69%), Gaps = 17/293 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF++A   V PSAMREV++E+P V WED+GG  EVK +L EAVEWP K+ E F+
Sbjct: 458  LKVTRADFDEALKHVEPSAMREVLVEIPNVSWEDIGGLEEVKKELTEAVEWPLKYPEIFE 517

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +  TRPP+GIL+FGPPG  KT++A+A+A+++  NF++VKGPEL SKWVGESEK VR++F 
Sbjct: 518  KFTTRPPSGILLFGPPGTGKTMLAKAIANKSESNFISVKGPELLSKWVGESEKGVRNIFR 577

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  +PSIIFFDEID L   RG   +   V++ V+SQ+L ELDGL +  +V V+ ATNR
Sbjct: 578  KARQASPSIIFFDEIDALLPKRGSYQESSHVTESVVSQILTELDGLEELKDVIVLGATNR 637

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR--KIPCSSDVNIRELACLSEGCT 980
            PD +D A++RPGR DR++YV PP+ T RE+IF ++L+  +   ++D+ ++EL   +EG  
Sbjct: 638  PDMLDEAMMRPGRLDRIIYVPPPDITGREKIFEVYLKDARDLLATDIGVKELVEKTEGFV 697

Query: 981  GADISLICREAAISAI------------EENLDA---SRITMQHLKTAIRHVQ 1018
            GADI +I REA + A+            EE  DA    R+T +H + A++ V+
Sbjct: 698  GADIEMIVREAKLGAMREFIAAMAERSDEEKADALANVRLTKKHFEDALKRVK 750



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 169/301 (56%), Gaps = 50/301 (16%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            +VP V +ED+GG      Q+ E +E P +H E F+R+G  PP G+L++GPPG  KTL+A+
Sbjct: 177  DVPNVHYEDIGGLGRELDQVREMIELPLRHPEIFERLGIEPPKGVLLYGPPGTGKTLIAK 236

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   NF+ + GPE+ SK+ GESE  +R +F  A+ NAP+IIF DEID +A  R +E
Sbjct: 237  AVANEVDANFITLSGPEIMSKYYGESEGKLREVFESAQENAPTIIFIDEIDSIAPKR-EE 295

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            + G  V  RV++QLL  +DGL  R  V VIAATN PD IDPAL R GRFDR + +G P+ 
Sbjct: 296  TKG-EVEQRVVAQLLALMDGLKGRGEVIVIAATNLPDSIDPALRRGGRFDREIEIGIPDR 354

Query: 948  TDREEIFRIHLRKIPCS-SDVNIRE---------------------------------LA 973
              R EIF++H R +P    D+ I +                                  +
Sbjct: 355  KGRLEIFQVHTRGVPLDLDDIEISKEEGQELSKTFAEYGEEEGKKFESEIKRKKFLDPFS 414

Query: 974  CLSEGCTGADISLICREAAISAIEENL--------------DASRITMQHLKTAIRHVQP 1019
             ++ G  GADISL+ +EAA+ A+ E L              +  ++T      A++HV+P
Sbjct: 415  SVTHGFVGADISLLVKEAAMHALREELKSLKTGEDIPIEIVERLKVTRADFDEALKHVEP 474

Query: 1020 S 1020
            S
Sbjct: 475  S 475



 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/279 (41%), Positives = 156/279 (55%), Gaps = 49/279 (17%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++   N
Sbjct: 186 IGGLGRELDQVREMIELPLRHPEIFERLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAN 245

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE  L EVF+SA ++AP ++FIDE+D+IAP R++   E+ QR+V
Sbjct: 246 FITLSGPEIMSKYYGESEGKLREVFESAQENAPTIIFIDEIDSIAPKREETKGEVEQRVV 305

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATN PDSI+PALRR GR DREIEI               +
Sbjct: 306 AQLLALMDGLKGRGEVIVIAATNLPDSIDPALRRGGRFDREIEI--------------GI 351

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEV-------------EY------------------- 619
           P    RLEI      G+   L D E+             EY                   
Sbjct: 352 PDRKGRLEIFQVHTRGVPLDLDDIEISKEEGQELSKTFAEYGEEEGKKFESEIKRKKFLD 411

Query: 620 -LSMATHGFVGADLAALCNEAALVCLRRYSK-IQTSSDV 656
             S  THGFVGAD++ L  EAA+  LR   K ++T  D+
Sbjct: 412 PFSSVTHGFVGADISLLVKEAAMHALREELKSLKTGEDI 450



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 21/211 (9%)

Query: 442 RPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQ 501
           RP  G+LL GPPGTGKT LA+  A+ S  N  +V GPE++S+  GESE+ +  +F  A Q
Sbjct: 522 RPPSGILLFGPPGTGKTMLAKAIANKSESNFISVKGPELLSKWVGESEKGVRNIFRKARQ 581

Query: 502 SAPAVVFIDELDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
           ++P+++F DE+DA+ P R    E   +++ +V+ +L  +DG+     V+V+ ATNRPD +
Sbjct: 582 ASPSIIFFDEIDALLPKRGSYQESSHVTESVVSQILTELDGLEELKDVIVLGATNRPDML 641

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGMEHSL-LDSE 616
           + A+ RPGRLDR I                 VP P    R +I    L      L  D  
Sbjct: 642 DEAMMRPGRLDRII----------------YVPPPDITGREKIFEVYLKDARDLLATDIG 685

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           V+ L   T GFVGAD+  +  EA L  +R +
Sbjct: 686 VKELVEKTEGFVGADIEMIVREAKLGAMREF 716


>gi|345569478|gb|EGX52344.1| hypothetical protein AOL_s00043g133 [Arthrobotrys oligospora ATCC
            24927]
          Length = 851

 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 201/279 (72%), Gaps = 2/279 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L +   DFE A  + +PSA+++++LE+P+ KW D+GGQ++VK +L EAVEWP +H E F
Sbjct: 551  SLSISAEDFETALKETKPSAIKDIVLELPETKWTDIGGQKDVKQKLKEAVEWPLRHPEVF 610

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +R+G +P  G+L++GPPGCSKTL A+A+A+EAGLNF+AVKGPEL +K+VGESE+ VR LF
Sbjct: 611  QRLGGQPRKGLLLYGPPGCSKTLTAKALATEAGLNFIAVKGPELLNKYVGESERGVRELF 670

Query: 862  AKARANAPSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAA 919
             KARA +PSI+FFDE+D L   R     + G   S  V++ LL E+DG+ +  NV ++AA
Sbjct: 671  RKARAASPSIVFFDEVDALGLNREGEGNNGGGGNSTGVLTALLNEMDGIEELGNVMILAA 730

Query: 920  TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 979
            TN+P+ IDPALLRPGR D +LYVGPP+   R EI  I  RK+    DV+I+ LA  ++G 
Sbjct: 731  TNKPEVIDPALLRPGRLDYILYVGPPDLESRTEILSIKFRKMKLGEDVDIQVLAGKTDGY 790

Query: 980  TGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            +GAD+  IC EA ++A+ E+L    +  +H + A+R V+
Sbjct: 791  SGADLVKICDEAVLAAMREDLGIDSVKWRHFEEALRGVK 829



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 157/316 (49%), Gaps = 55/316 (17%)

Query: 371 ETKVYLYPPLNAVS-KSLREGTLPNAQIEFQNVQAT-------------VEQDI------ 410
           ET+VY +  L+ V+ K L++G  P+       V  T             V +++      
Sbjct: 225 ETRVYEFDKLSTVAFKGLQDGPAPSTPRPKAVVPTTPRKSGISKEKPQEVPREVKSFPVT 284

Query: 411 --SKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
             S +GGL ++  IL+  I SS +     +   L P  G+LL+GPPGTGKT L R  A +
Sbjct: 285 KSSSIGGLERQLEILRTHIASSLLHFKRFTRSNLTPPLGILLYGPPGTGKTMLLRSIATE 344

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP----AVVFIDELDAIAPARKDGG 523
           +G N F ++   ++ +  GESE ++ +VF  A +S      +++FIDE+DA AP R    
Sbjct: 345 AGANNFIIDS-SLIGKFLGESEASIRKVFAEAKKSVDGKNRSIIFIDEIDAFAPKRGGTD 403

Query: 524 EELSQRMVATLLNLMDG---VCRTDG------VLVIAATNRPDSIEPALRRPGRLDREIE 574
                R+V TLL  MD    V   DG      V+VIAATNRP+ I+PALRRPGR D EIE
Sbjct: 404 TTSDSRLVTTLLTEMDALAAVGEDDGKKDSSRVIVIAATNRPNGIDPALRRPGRFDLEIE 463

Query: 575 IDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME----HSLLDSEVEYLSMATHGFVGA 630
           I               +P    RLEIL  LL  +E     S+    +   +   HGFVGA
Sbjct: 464 I--------------PIPDAKSRLEILKLLLKDVETEFDKSVDAGHITSWANRAHGFVGA 509

Query: 631 DLAALCNEAALVCLRR 646
           DL  +  +AA   + R
Sbjct: 510 DLETVVKKAATRSVHR 525



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 148/307 (48%), Gaps = 43/307 (14%)

Query: 756  KVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMF 815
            K +P  +   +   P  K   +GG       L   +     H + F R    PP GIL++
Sbjct: 268  KEKPQEVPREVKSFPVTKSSSIGGLERQLEILRTHIASSLLHFKRFTRSNLTPPLGILLY 327

Query: 816  GPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP----SI 871
            GPPG  KT++ R++A+EAG N   +    L  K++GESE ++R +FA+A+ +      SI
Sbjct: 328  GPPGTGKTMLLRSIATEAGANNFIIDS-SLIGKFLGESEASIRKVFAEAKKSVDGKNRSI 386

Query: 872  IFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGL---------HQRVNVTVIAATNR 922
            IF DEID  A  RG  +D  S S R+++ LL E+D L              V VIAATNR
Sbjct: 387  IFIDEIDAFAPKRGG-TDTTSDS-RLVTTLLTEMDALAAVGEDDGKKDSSRVIVIAATNR 444

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDV-----NIRELACLSE 977
            P+ IDPAL RPGRFD  + +  P+   R EI ++ L+ +    D      +I   A  + 
Sbjct: 445  PNGIDPALRRPGRFDLEIEIPIPDAKSRLEILKLLLKDVETEFDKSVDAGHITSWANRAH 504

Query: 978  GCTGADISLICREAAISAIEENLDASR----------------------ITMQHLKTAIR 1015
            G  GAD+  + ++AA  ++  +L                          I+ +  +TA++
Sbjct: 505  GFVGADLETVVKKAATRSVHRSLKQKEQGTSLFPGFFLDDVEVSESSLSISAEDFETALK 564

Query: 1016 HVQPSEI 1022
              +PS I
Sbjct: 565  ETKPSAI 571



 Score =  139 bits (351), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 122/211 (57%), Gaps = 19/211 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG +P KG+LL+GPPG  KT  A+  A ++G+N   V GPE++++  GESE+ + E+F  
Sbjct: 613 LGGQPRKGLLLYGPPGCSKTLTAKALATEAGLNFIAVKGPELLNKYVGESERGVRELFRK 672

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A  ++P++VF DE+DA+   R     +GG   S  ++  LLN MDG+     V+++AATN
Sbjct: 673 ARAASPSIVFFDEVDALGLNREGEGNNGGGGNSTGVLTALLNEMDGIEELGNVMILAATN 732

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           +P+ I+PAL RPGRLD            +L   P   P    R EIL      M+    D
Sbjct: 733 KPEVIDPALLRPGRLD-----------YILYVGP---PDLESRTEILSIKFRKMKLG-ED 777

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            +++ L+  T G+ GADL  +C+EA L  +R
Sbjct: 778 VDIQVLAGKTDGYSGADLVKICDEAVLAAMR 808


>gi|50552452|ref|XP_503636.1| YALI0E06655p [Yarrowia lipolytica]
 gi|49649505|emb|CAG79218.1| YALI0E06655p [Yarrowia lipolytica CLIB122]
          Length = 774

 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 140/274 (51%), Positives = 193/274 (70%), Gaps = 1/274 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             L++ + D E+A + VRPSAMRE+ LE P   W D+GGQ  VK +L + VEWP    +  
Sbjct: 478  GLEVTMPDLERALLDVRPSAMREIFLEKPSTTWSDIGGQSGVKEKLKQMVEWPLTKADTM 537

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            K +G  PP G+L++GPPGCSKTL+A+A+A+E+GLNFL+VKGPELF+K+VGESE+AVR +F
Sbjct: 538  KNLGITPPRGVLLYGPPGCSKTLIAKALANESGLNFLSVKGPELFNKYVGESERAVREIF 597

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KARA APSIIFFDEID L+  RG    G    +RV++ LL E+DG+     V V+AATN
Sbjct: 598  RKARAAAPSIIFFDEIDALSTARGHSEAGAG-GERVLTSLLTEMDGIESLNGVMVLAATN 656

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID AL+RPGR  RLLYVGPP+E  R++I +I  + +   S+V++ E+A  +EG TG
Sbjct: 657  RPDVIDSALMRPGRLSRLLYVGPPDEHARQQILKIRTKNMCLGSEVDLEEIAKTTEGMTG 716

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIR 1015
            A+I  +C EA + A+ ++ DA  +T +     ++
Sbjct: 717  AEIVALCEEAGLYAMSQDEDAKEVTKKDFDHVLK 750



 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 103/239 (43%), Positives = 151/239 (63%), Gaps = 20/239 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    LK  I +     S  S  G+ P +GVLLHGPPGTGKT L R  A +S  +
Sbjct: 240 IGGLDQHIVELKSTIELPLHHPSLFSRFGISPPRGVLLHGPPGTGKTMLLRAVAQESNAH 299

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE--ELSQR 529
           + T+NGP +VS+  GE+E +L  +F+ A +  PA+VFIDE+DA+ P R+DG E  +   R
Sbjct: 300 VLTINGPSIVSKYLGETESSLRAIFEEARKYQPAIVFIDEIDALVP-RRDGDESGQAESR 358

Query: 530 MVATLLNLMDGVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +VATLL LMDG+ ++    ++V+ +TNRP++I+PALRR GR DRE+EI            
Sbjct: 359 VVATLLTLMDGMSQSASAKIVVVGSTNRPNAIDPALRRAGRFDREVEI------------ 406

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              +P+   RL IL   ++ M H++ + +++Y+S  THG+VGADL+ALC E  +  + R
Sbjct: 407 --GIPNAEARLSILSIQMADMPHNMSEEDIQYISSITHGYVGADLSALCREGVMNAINR 463



 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 157/268 (58%), Gaps = 16/268 (5%)

Query: 768  EVPKVK-WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            E+PK   ++ +GG  +   +L   +E P  H   F R G  PP G+L+ GPPG  KT++ 
Sbjct: 230  ELPKTTTYKSIGGLDQHIVELKSTIELPLHHPSLFSRFGISPPRGVLLHGPPGTGKTMLL 289

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            RAVA E+  + L + GP + SK++GE+E ++R++F +AR   P+I+F DEID L   R  
Sbjct: 290  RAVAQESNAHVLTINGPSIVSKYLGETESSLRAIFEEARKYQPAIVFIDEIDALVPRRDG 349

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVN--VTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
            +  G + S RV++ LL  +DG+ Q  +  + V+ +TNRP+ IDPAL R GRFDR + +G 
Sbjct: 350  DESGQAES-RVVATLLTLMDGMSQSASAKIVVVGSTNRPNAIDPALRRAGRFDREVEIGI 408

Query: 945  PNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
            PN   R  I  I +  +P + S+ +I+ ++ ++ G  GAD+S +CRE  ++AI   L+  
Sbjct: 409  PNAEARLSILSIQMADMPHNMSEEDIQYISSITHGYVGADLSALCREGVMNAINRGLEEH 468

Query: 1004 -----------RITMQHLKTAIRHVQPS 1020
                        +TM  L+ A+  V+PS
Sbjct: 469  GSALNAVNSGLEVTMPDLERALLDVRPS 496



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/282 (38%), Positives = 159/282 (56%), Gaps = 39/282 (13%)

Query: 380 LNAVSKSLREGTLPNAQIEFQNVQATVEQDI---------SKLGGLSKEYAILKDIIISS 430
           LNAV+  L E T+P+ +    +V+ +  ++I         S +GG S     LK ++   
Sbjct: 472 LNAVNSGL-EVTMPDLERALLDVRPSAMREIFLEKPSTTWSDIGGQSGVKEKLKQMVEWP 530

Query: 431 SVKS-TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESE 489
             K+ T+ +LG+ P +GVLL+GPPG  KT +A+  A++SG+N  +V GPE+ ++  GESE
Sbjct: 531 LTKADTMKNLGITPPRGVLLYGPPGCSKTLIAKALANESGLNFLSVKGPELFNKYVGESE 590

Query: 490 QALHEVFDSASQSAPAVVFIDELDAIAPARKD-----GGEELSQRMVATLLNLMDGVCRT 544
           +A+ E+F  A  +AP+++F DE+DA++ AR       GGE    R++ +LL  MDG+   
Sbjct: 591 RAVREIFRKARAAAPSIIFFDEIDALSTARGHSEAGAGGE----RVLTSLLTEMDGIESL 646

Query: 545 DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL 604
           +GV+V+AATNRPD I+ AL RPGRL R           LL   P   P    R +IL   
Sbjct: 647 NGVMVLAATNRPDVIDSALMRPGRLSR-----------LLYVGP---PDEHARQQILKIR 692

Query: 605 LSGMEHSLLDSEV--EYLSMATHGFVGADLAALCNEAALVCL 644
              M    L SEV  E ++  T G  GA++ ALC EA L  +
Sbjct: 693 TKNM---CLGSEVDLEEIAKTTEGMTGAEIVALCEEAGLYAM 731


>gi|374633216|ref|ZP_09705583.1| AAA family ATPase, CDC48 subfamily [Metallosphaera yellowstonensis
            MK1]
 gi|373524700|gb|EHP69577.1| AAA family ATPase, CDC48 subfamily [Metallosphaera yellowstonensis
            MK1]
          Length = 753

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 213/329 (64%), Gaps = 38/329 (11%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF  A   V+P+ +REV +EVP+V+W ++GG   VK QL EAVEWP +  E F 
Sbjct: 422  LKVTMEDFMNAMKFVQPTLLREVYVEVPRVRWSEIGGLDNVKQQLREAVEWPMRFPELFA 481

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            + G RPP G+L+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 482  KSGIRPPKGVLLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESEKAIREIFK 541

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP++IFFDEID +A +RG   D   V++R+++QLL E+DG+     V VIAATNR
Sbjct: 542  RARQTAPTVIFFDEIDSIAPMRGMAHDS-GVTERMVNQLLSEMDGIVPLSKVVVIAATNR 600

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP++  R EI ++H   +P SSDVN+  LA  +EG TGA
Sbjct: 601  PDILDPALLRPGRFDRLIYVPPPDKKARLEILKVHTASVPLSSDVNLEVLAEKTEGYTGA 660

Query: 983  DISLICREAAISAIEE----------------NLDAS-----------------RITMQH 1009
            D+  + REA + A+ +                 +DA                  ++TM +
Sbjct: 661  DLEALVREATMIALRDVYAKCGTEANNKCSGLKVDAQTECYNRTVRECVEGNMPKVTMSY 720

Query: 1010 LKTAIRHVQPS----EIHSYKELSAKFQR 1034
             + A++ V PS    +I  Y+ ++ + +R
Sbjct: 721  FEEAMKVVTPSLTKVQIDRYERMAKELKR 749



 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 122/270 (45%), Positives = 171/270 (63%), Gaps = 21/270 (7%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V WED+G   EVK +L E +E P KH E F+ +G  PP G+L++GPPG  KTL+ARA+
Sbjct: 172  PRVTWEDIGDLDEVKEKLREMIELPMKHPELFQHLGIEPPKGVLLYGPPGVGKTLLARAL 231

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E G  F+ + GPE+ SK+ GESE+ +R +F  A  NAPSIIF DEID +A  R +E  
Sbjct: 232  ANEIGAYFVTINGPEIMSKFYGESEQRLREIFDDADKNAPSIIFIDEIDAIAPKR-EEVT 290

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV+SQLL  +DG+  R  + VI ATNRPD +DPAL RPGRFDR + + PP+   
Sbjct: 291  G-EVEKRVVSQLLTLMDGIKGRGRIVVIGATNRPDAVDPALRRPGRFDREIEIRPPDTKA 349

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R+EI ++H R +P + DVN+  +A ++ G TGADI+ + +EAA+ A+             
Sbjct: 350  RKEILQVHTRNMPVAEDVNLDVIAEMTNGYTGADIAALAKEAAMHALRRFINTGDRKKLL 409

Query: 998  -------ENLDASRITMQHLKTAIRHVQPS 1020
                   E L   ++TM+    A++ VQP+
Sbjct: 410  EQEKLSPEVLKELKVTMEDFMNAMKFVQPT 439



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/212 (48%), Positives = 139/212 (65%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL+GPPG GKT LAR  A++ G    T+NGPE++S+ YGESEQ L E+
Sbjct: 203 FQHLGIEPPKGVLLYGPPGVGKTLLARALANEIGAYFVTINGPEIMSKFYGESEQRLREI 262

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           FD A ++AP+++FIDE+DAIAP R++   E+ +R+V+ LL LMDG+     ++VI ATNR
Sbjct: 263 FDDADKNAPSIIFIDEIDAIAPKREEVTGEVEKRVVSQLLTLMDGIKGRGRIVVIGATNR 322

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+++PALRRPGR DREIEI            P   P    R EIL      M  +  D 
Sbjct: 323 PDAVDPALRRPGRFDREIEI-----------RP---PDTKARKEILQVHTRNMPVA-EDV 367

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            ++ ++  T+G+ GAD+AAL  EAA+  LRR+
Sbjct: 368 NLDVIAEMTNGYTGADIAALAKEAAMHALRRF 399



 Score =  181 bits (458), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/252 (43%), Positives = 147/252 (58%), Gaps = 26/252 (10%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S++GGL      L++ +          +  G+RP KGVLL GPPGTGKT LA+  A +SG
Sbjct: 454 SEIGGLDNVKQQLREAVEWPMRFPELFAKSGIRPPKGVLLFGPPGTGKTMLAKAVATESG 513

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEEL 526
            N   V GPEV+S+  GESE+A+ E+F  A Q+AP V+F DE+D+IAP R    D G  +
Sbjct: 514 ANFIAVRGPEVLSKWVGESEKAIREIFKRARQTAPTVIFFDEIDSIAPMRGMAHDSG--V 571

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           ++RMV  LL+ MDG+     V+VIAATNRPD ++PAL RPGR DR I             
Sbjct: 572 TERMVNQLLSEMDGIVPLSKVVVIAATNRPDILDPALLRPGRFDRLI------------- 618

Query: 587 SPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VP P +  RLEIL    + +  S  D  +E L+  T G+ GADL AL  EA ++ L
Sbjct: 619 ---YVPPPDKKARLEILKVHTASVPLS-SDVNLEVLAEKTEGYTGADLEALVREATMIAL 674

Query: 645 RR-YSKIQTSSD 655
           R  Y+K  T ++
Sbjct: 675 RDVYAKCGTEAN 686


>gi|268325728|emb|CBH39316.1| cell division control protein 48 [uncultured archaeon]
          Length = 739

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 155/320 (48%), Positives = 218/320 (68%), Gaps = 19/320 (5%)

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
            M EK   L++ + DF +A     PSA+REV +EVP VKWED+GG    K +L E VEWP 
Sbjct: 424  MVEK---LEVTMDDFNEALKNTEPSALREVFVEVPNVKWEDIGGLERAKQELKEVVEWPL 480

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            K+ + F  + T+PP GIL+FGPPG  KT++ +AVA+E+  NF+++KGPEL SKWVGESEK
Sbjct: 481  KYPDVFSLLNTKPPKGILLFGPPGTGKTMLVKAVANESDANFISIKGPELLSKWVGESEK 540

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            AVR +F KA+ ++P IIF DEID +A IRG   D   V++RV+SQ+L E+DGL +  +V 
Sbjct: 541  AVREIFRKAKQSSPCIIFLDEIDSIAPIRGAGLDS-HVTERVVSQILTEMDGLEELKDVM 599

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL 975
            +IAATNRPD IDPALLRPGR DRL+Y+  P +  RE IF++HL   P  +DV+I ELA +
Sbjct: 600  IIAATNRPDIIDPALLRPGRLDRLIYIQSPTKEAREAIFKVHLAGKPLGADVSIEELAEM 659

Query: 976  SEGCTGADISLICREAAISAI---------EENLD---ASRITM-QHLKTAIRHVQP-SE 1021
            +EG  GADI+ I +EA ++A+         EEN+     + I M +H ++AI+ ++P + 
Sbjct: 660  TEGYVGADIAAIIKEAVMAALREFVTPEITEENIKDIIENIIVMKKHFESAIKSMKPTTT 719

Query: 1022 IHSYKELSAKFQRLV-HSNA 1040
            + + +E   + + LV H+ A
Sbjct: 720  VKAQQEFEERAEDLVRHAYA 739



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/272 (42%), Positives = 170/272 (62%), Gaps = 16/272 (5%)

Query: 763  REVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            RE  + VP+V +ED+GG +     + E +E P +H E F+R+G  PP G+L+ GPPG  K
Sbjct: 176  REEKIGVPRVAYEDIGGLKREIGLIREMIELPLRHPELFERLGIEPPKGVLLRGPPGTGK 235

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL+A+AVA+E   NF ++ GPE+ SK+ GESE+ +R +F  A  NAPSI F DE+D +A 
Sbjct: 236  TLIAKAVANETDANFYSISGPEIMSKFYGESERHLRQIFEDAEKNAPSITFIDELDSIAP 295

Query: 883  IRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
             R  E+ G  V  RV++QLL  +DGL  R  V VI ATNRP+ +D AL R GRFDR L +
Sbjct: 296  KRS-ETTG-EVERRVVAQLLSLMDGLESRGQVVVIGATNRPNALDEALRRGGRFDRELEI 353

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----- 997
            G P+   R+EI ++H R +P + DV ++++A L+ G  GAD++ +C+EAA+ A+      
Sbjct: 354  GIPDRNGRDEILQVHTRGMPLAEDVKLKQIANLTHGFVGADLATLCKEAAMHALRKILPE 413

Query: 998  ---------ENLDASRITMQHLKTAIRHVQPS 1020
                     E ++   +TM     A+++ +PS
Sbjct: 414  IDLEQEIPAEMVEKLEVTMDDFNEALKNTEPS 445



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/272 (40%), Positives = 168/272 (61%), Gaps = 23/272 (8%)

Query: 383 VSKSLREGTL-PNAQIEFQNVQATVEQ------DISKLGGLSKEYAILKDII-ISSSVKS 434
           V+ ++  GTL PN + E    +A  E+          +GGL +E  +++++I +      
Sbjct: 153 VTNTVPLGTLIPNIETEILLRKAREEKIGVPRVAYEDIGGLKREIGLIREMIELPLRHPE 212

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               LG+ P KGVLL GPPGTGKT +A+  A+++  N ++++GPE++S+ YGESE+ L +
Sbjct: 213 LFERLGIEPPKGVLLRGPPGTGKTLIAKAVANETDANFYSISGPEIMSKFYGESERHLRQ 272

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F+ A ++AP++ FIDELD+IAP R +   E+ +R+VA LL+LMDG+     V+VI ATN
Sbjct: 273 IFEDAEKNAPSITFIDELDSIAPKRSETTGEVERRVVAQLLSLMDGLESRGQVVVIGATN 332

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RP++++ ALRR GR DRE+EI               +P    R EIL     GM  +  D
Sbjct: 333 RPNALDEALRRGGRFDRELEI--------------GIPDRNGRDEILQVHTRGMPLA-ED 377

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            +++ ++  THGFVGADLA LC EAA+  LR+
Sbjct: 378 VKLKQIANLTHGFVGADLATLCKEAAMHALRK 409



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 139/237 (58%), Gaps = 17/237 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    LK+++          S L  +P KG+LL GPPGTGKT L +  A++S  N
Sbjct: 462 IGGLERAKQELKEVVEWPLKYPDVFSLLNTKPPKGILLFGPPGTGKTMLVKAVANESDAN 521

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRM 530
             ++ GPE++S+  GESE+A+ E+F  A QS+P ++F+DE+D+IAP R  G    +++R+
Sbjct: 522 FISIKGPELLSKWVGESEKAVREIFRKAKQSSPCIIFLDEIDSIAPIRGAGLDSHVTERV 581

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ +L  MDG+     V++IAATNRPD I+PAL RPGRLDR I I               
Sbjct: 582 VSQILTEMDGLEELKDVMIIAATNRPDIIDPALLRPGRLDRLIYIQS------------- 628

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            P+   R  I    L+G      D  +E L+  T G+VGAD+AA+  EA +  LR +
Sbjct: 629 -PTKEAREAIFKVHLAGKPLG-ADVSIEELAEMTEGYVGADIAAIIKEAVMAALREF 683


>gi|238880253|gb|EEQ43891.1| protein AFG2 [Candida albicans WO-1]
          Length = 766

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 143/306 (46%), Positives = 216/306 (70%), Gaps = 8/306 (2%)

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
            G+ +     A+K+ + D   A  ++RPSAMRE+ LE+PKV W D+GGQ E+K +L+E V+
Sbjct: 457  GLTVGISQTAIKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQ 516

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P +  ++FK +G   P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+F+K+VGE
Sbjct: 517  LPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGE 576

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+A+R +F KARA +PSIIFFDEID +A  R  +S   + S+ V++ LL E+DG+ +  
Sbjct: 577  SERAIREIFRKARAASPSIIFFDEIDAIAGDRDGDSSTTAASN-VLTSLLNEIDGVEELK 635

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS---DVNI 969
             V ++ ATN+P +IDPALLRPGR DR +YV PP+   R +I +   RK    S    V++
Sbjct: 636  GVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSGDESVDL 695

Query: 970  RELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSY 1025
            ++LA L++GC+GA+++L+C+EA ++AI EN +A+ +T +H + A+    R + P  +  Y
Sbjct: 696  QKLAELTDGCSGAEVTLLCQEAGLAAIMENKEATTVTNKHFEHALKGISRGITPEMLEYY 755

Query: 1026 KELSAK 1031
            ++ S K
Sbjct: 756  EKFSKK 761



 Score =  187 bits (474), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/278 (37%), Positives = 165/278 (59%), Gaps = 25/278 (8%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVK 433
           YL+ P  +++ ++   + P A+ ++ N+   +  D  ++GGLSK+  +LK  I +  +  
Sbjct: 198 YLFSPTTSINVAI--SSFP-ARSKYPNLPQQITYD--QVGGLSKQIELLKSTIELPLNNP 252

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD-SGVNLFTVNGPEVVSQNYGESEQAL 492
           +  S  G+ P +G+LLHGPPGTGKT L R  A+  +  ++ T+NGP +VS+  GE+E A+
Sbjct: 253 TLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKYLGETENAI 312

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            ++F+ A +  P+++F+DE+D+IAP+R  D   E   R+VA LL +MDG+     ++V+ 
Sbjct: 313 RDIFNEAKKFQPSIIFMDEIDSIAPSRTSDDSGETESRVVAQLLTVMDGMGDNGRIVVVG 372

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH- 610
           ATNRP+SI+ ALRRPGR D+E+EI               +P    R EIL    + M   
Sbjct: 373 ATNRPNSIDSALRRPGRFDQEVEI--------------GIPDVEAREEILTKQFAKMNSE 418

Query: 611 --SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              +   E+  ++  THG+VGADL ALC E+ +  + R
Sbjct: 419 KCQITKKEIASIASKTHGYVGADLTALCRESVMKAINR 456



 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 163/316 (51%), Gaps = 27/316 (8%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++ VGG  +    L   +E P  +   F   G  PP GIL+ GPPG  KT++ R VA
Sbjct: 225  QITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVA 284

Query: 831  -SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
             S    + L + GP + SK++GE+E A+R +F +A+   PSIIF DEID +A  R  +  
Sbjct: 285  NSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDDS 344

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G + S RV++QLL  +DG+     + V+ ATNRP+ ID AL RPGRFD+ + +G P+   
Sbjct: 345  GETES-RVVAQLLTVMDGMGDNGRIVVVGATNRPNSIDSALRRPGRFDQEVEIGIPDVEA 403

Query: 950  REEIFRIHLRKI---PCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL----- 1000
            REEI      K+    C  +   I  +A  + G  GAD++ +CRE+ + AI   L     
Sbjct: 404  REEILTKQFAKMNSEKCQITKKEIASIASKTHGYVGADLTALCRESVMKAINRGLTVGIS 463

Query: 1001 -DASRITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADE 1044
              A ++T+  +  A+  ++P               S+I   +EL  K   +V    EA +
Sbjct: 464  QTAIKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASD 523

Query: 1045 SGYQLRPSKSIGSNMW 1060
            S   L  S   G  ++
Sbjct: 524  SFKNLGVSSPKGVLLY 539



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 17/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           +  +LG+   KGVLL+GPPG  KT  A+  A +SG+N   V GPE+ ++  GESE+A+ E
Sbjct: 524 SFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIRE 583

Query: 495 VFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           +F  A  ++P+++F DE+DAIA  R  D     +  ++ +LLN +DGV    GV+++ AT
Sbjct: 584 IFRKARAASPSIIFFDEIDAIAGDRDGDSSTTAASNVLTSLLNEIDGVEELKGVVIVGAT 643

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           N+P  I+PAL RPGRLDR I +              A P    RL+IL            
Sbjct: 644 NKPTEIDPALLRPGRLDRHIYV--------------APPDYDARLQILQKCSRKFNLQSG 689

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCL 644
           D  V+   +A  T G  GA++  LC EA L  +
Sbjct: 690 DESVDLQKLAELTDGCSGAEVTLLCQEAGLAAI 722


>gi|332796393|ref|YP_004457893.1| AAA ATPase [Acidianus hospitalis W1]
 gi|332694128|gb|AEE93595.1| AAA family ATPase, CDC48 subfamily [Acidianus hospitalis W1]
          Length = 750

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 146/328 (44%), Positives = 212/328 (64%), Gaps = 37/328 (11%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + DF +A   ++P+ +REV +EVPKV+W D+GG  +VK QL EA+EW  K  + F 
Sbjct: 420  LKVTMNDFLEAMKSIQPTLLREVYVEVPKVRWSDIGGLEDVKQQLREAIEWQIKFPDVFT 479

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            + G R P G+L+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 480  KSGIRAPKGVLLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESEKAIREIFR 539

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP++IFFDEID +A +RG   D   V++R+++QLL E+DG+     V VIAATNR
Sbjct: 540  RARQTAPTVIFFDEIDSIAPMRGFAHDS-GVTERIVNQLLAEMDGITPLNKVVVIAATNR 598

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFDRL+YV PP++  R EI ++H R +P + DVN+  +A  +EG TGA
Sbjct: 599  PDILDPALLRPGRFDRLIYVPPPDKIARLEILKVHTRNVPLAEDVNLETIAEKTEGYTGA 658

Query: 983  DISLICREAAISAIEE--------------------------------NLDASRITMQHL 1010
            D+  + REA +  + E                                N  + +++M+H 
Sbjct: 659  DLEAVVREATMLMLREVSAVCEQKSREACTKDGKFVEECYNKEMRNCMNNFSGKVSMKHF 718

Query: 1011 KTAIRHVQPS----EIHSYKELSAKFQR 1034
            + A++ V PS    +I  Y+ L+ + +R
Sbjct: 719  EEALKIVSPSITKADIERYERLAKELKR 746



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 124/267 (46%), Positives = 174/267 (65%), Gaps = 19/267 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV WED+G   +VK ++ E VE P KH E F+R+G  PP GIL++GPPG  KTL+ARA+A
Sbjct: 173  KVTWEDIGDLEDVKERIREIVELPMKHPELFQRLGIEPPKGILLYGPPGVGKTLLARALA 232

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F+++ GPE+ SK+ GESE+ +R +F +A  NAPSIIF DEID +A  R +E  G
Sbjct: 233  NEIGAYFISINGPEIMSKFYGESEERLRQIFDEANKNAPSIIFIDEIDAIAPKR-EEVTG 291

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV++QLL  +DG+  R  + VI ATNRPD IDPAL RPGRFDR + + PP+   R
Sbjct: 292  -EVEKRVVAQLLTLMDGIKGRGKIIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKAR 350

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE-------NLDAS 1003
            +EI ++H R +P S DVN+ ++A ++ G TGAD++ + +EAA+ A+         NLD  
Sbjct: 351  KEILQVHTRSMPLSDDVNLDDIAEMTNGYTGADLAALAKEAAMVALRRFLATTKVNLDQG 410

Query: 1004 RI----------TMQHLKTAIRHVQPS 1020
            +I          TM     A++ +QP+
Sbjct: 411  QIPAELLKELKVTMNDFLEAMKSIQPT 437



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 103/212 (48%), Positives = 141/212 (66%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LAR  A++ G    ++NGPE++S+ YGESE+ L ++
Sbjct: 203 FQRLGIEPPKGILLYGPPGVGKTLLARALANEIGAYFISINGPEIMSKFYGESEERLRQI 262

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           FD A+++AP+++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     ++VI ATNR
Sbjct: 263 FDEANKNAPSIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGIKGRGKIIVIGATNR 322

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD+I+PALRRPGR DREIEI            P   P    R EIL      M  S  D 
Sbjct: 323 PDAIDPALRRPGRFDREIEI-----------RP---PDTKARKEILQVHTRSMPLS-DDV 367

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            ++ ++  T+G+ GADLAAL  EAA+V LRR+
Sbjct: 368 NLDDIAEMTNGYTGADLAALAKEAAMVALRRF 399



 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/263 (41%), Positives = 145/263 (55%), Gaps = 27/263 (10%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL      L++ I          +  G+R  KGVLL GPPGTGKT LA+  A +SG
Sbjct: 452 SDIGGLEDVKQQLREAIEWQIKFPDVFTKSGIRAPKGVLLFGPPGTGKTMLAKAVATESG 511

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEEL 526
            N   V GPEV+S+  GESE+A+ E+F  A Q+AP V+F DE+D+IAP R    D G  +
Sbjct: 512 ANFIAVRGPEVLSKWVGESEKAIREIFRRARQTAPTVIFFDEIDSIAPMRGFAHDSG--V 569

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           ++R+V  LL  MDG+   + V+VIAATNRPD ++PAL RPGR DR I             
Sbjct: 570 TERIVNQLLAEMDGITPLNKVVVIAATNRPDILDPALLRPGRFDRLI------------- 616

Query: 587 SPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
               VP P +  RLEIL      +  +  D  +E ++  T G+ GADL A+  EA ++ L
Sbjct: 617 ---YVPPPDKIARLEILKVHTRNVPLA-EDVNLETIAEKTEGYTGADLEAVVREATMLML 672

Query: 645 RRYSKI--QTSSDVLHSTGTLFE 665
           R  S +  Q S +     G   E
Sbjct: 673 REVSAVCEQKSREACTKDGKFVE 695


>gi|68479477|ref|XP_716270.1| hypothetical protein CaO19.6432 [Candida albicans SC5314]
 gi|68479650|ref|XP_716187.1| hypothetical protein CaO19.13790 [Candida albicans SC5314]
 gi|46437846|gb|EAK97186.1| hypothetical protein CaO19.13790 [Candida albicans SC5314]
 gi|46437934|gb|EAK97273.1| hypothetical protein CaO19.6432 [Candida albicans SC5314]
          Length = 766

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 143/306 (46%), Positives = 216/306 (70%), Gaps = 8/306 (2%)

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
            G+ +     A+K+ + D   A  ++RPSAMRE+ LE+PKV W D+GGQ E+K +L+E V+
Sbjct: 457  GLTVGIPQTAIKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQ 516

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P +  ++FK +G   P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+F+K+VGE
Sbjct: 517  LPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGE 576

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+A+R +F KARA +PSIIFFDEID +A  R  +S   + S+ V++ LL E+DG+ +  
Sbjct: 577  SERAIREIFRKARAASPSIIFFDEIDAIAGDRDGDSSTTAASN-VLTSLLNEIDGVEELK 635

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS---DVNI 969
             V ++ ATN+P +IDPALLRPGR DR +YV PP+   R +I +   RK    S    V++
Sbjct: 636  GVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSGDESVDL 695

Query: 970  RELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSY 1025
            ++LA L++GC+GA+++L+C+EA ++AI EN +A+ +T +H + A+    R + P  +  Y
Sbjct: 696  QKLAELTDGCSGAEVTLLCQEAGLAAIMENKEATTVTNKHFEHALKGISRGITPEMLEYY 755

Query: 1026 KELSAK 1031
            ++ S K
Sbjct: 756  EKFSKK 761



 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/278 (37%), Positives = 164/278 (58%), Gaps = 25/278 (8%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVK 433
           YL+ P  +++  +   + P A+ ++ N+   +  D  ++GGLSK+  +LK  I +  +  
Sbjct: 198 YLFSPTTSIN--VATSSFP-ARSKYPNLPQQITYD--QVGGLSKQIELLKSTIELPLNNP 252

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD-SGVNLFTVNGPEVVSQNYGESEQAL 492
           +  S  G+ P +G+LLHGPPGTGKT L R  A+  +  ++ T+NGP +VS+  GE+E A+
Sbjct: 253 TLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKYLGETENAI 312

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            ++F+ A +  P+++F+DE+D+IAP+R  D   E   R+VA LL +MDG+     ++VI 
Sbjct: 313 RDIFNEAKKFQPSIIFMDEIDSIAPSRTSDDSGETESRVVAQLLTVMDGMGDNGRIVVIG 372

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH- 610
           ATNRP+SI+ ALRRPGR D+E+EI               +P    R EIL    + M   
Sbjct: 373 ATNRPNSIDSALRRPGRFDQEVEI--------------GIPDVEAREEILTKQFAKMNSE 418

Query: 611 --SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              +   E+  ++  THG+VGADL ALC E+ +  + R
Sbjct: 419 KCQITKEEIASIASKTHGYVGADLTALCRESVMKAINR 456



 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/316 (34%), Positives = 163/316 (51%), Gaps = 27/316 (8%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++ VGG  +    L   +E P  +   F   G  PP GIL+ GPPG  KT++ R VA
Sbjct: 225  QITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVA 284

Query: 831  -SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
             S    + L + GP + SK++GE+E A+R +F +A+   PSIIF DEID +A  R  +  
Sbjct: 285  NSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDDS 344

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G + S RV++QLL  +DG+     + VI ATNRP+ ID AL RPGRFD+ + +G P+   
Sbjct: 345  GETES-RVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEA 403

Query: 950  REEIFRIHLRKI---PCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL----- 1000
            REEI      K+    C  +   I  +A  + G  GAD++ +CRE+ + AI   L     
Sbjct: 404  REEILTKQFAKMNSEKCQITKEEIASIASKTHGYVGADLTALCRESVMKAINRGLTVGIP 463

Query: 1001 -DASRITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADE 1044
              A ++T+  +  A+  ++P               S+I   +EL  K   +V    EA +
Sbjct: 464  QTAIKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASD 523

Query: 1045 SGYQLRPSKSIGSNMW 1060
            S   L  S   G  ++
Sbjct: 524  SFKNLGVSSPKGVLLY 539



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 17/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           +  +LG+   KGVLL+GPPG  KT  A+  A +SG+N   V GPE+ ++  GESE+A+ E
Sbjct: 524 SFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIRE 583

Query: 495 VFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           +F  A  ++P+++F DE+DAIA  R  D     +  ++ +LLN +DGV    GV+++ AT
Sbjct: 584 IFRKARAASPSIIFFDEIDAIAGDRDGDSSTTAASNVLTSLLNEIDGVEELKGVVIVGAT 643

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           N+P  I+PAL RPGRLDR I +              A P    RL+IL            
Sbjct: 644 NKPTEIDPALLRPGRLDRHIYV--------------APPDYDARLQILQKCSRKFNLQSG 689

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCL 644
           D  V+   +A  T G  GA++  LC EA L  +
Sbjct: 690 DESVDLQKLAELTDGCSGAEVTLLCQEAGLAAI 722


>gi|344234466|gb|EGV66334.1| hypothetical protein CANTEDRAFT_128774 [Candida tenuis ATCC 10573]
          Length = 773

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 143/310 (46%), Positives = 212/310 (68%), Gaps = 13/310 (4%)

Query: 708  SSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVIL 767
            S+L     +  I     NG+S S            +KL + D   +   +RPSAMRE+ L
Sbjct: 454  SALCRESVMKAINRGLKNGISQSD-----------IKLTVEDMLSSLPDIRPSAMREIFL 502

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E+PKV W D+GGQ E+K +L+E V+ P +  E F ++G   P G+L++GPPGCSKTL A+
Sbjct: 503  EMPKVHWSDIGGQHELKRKLVEVVQLPLEAAETFNKLGVSAPKGVLLYGPPGCSKTLTAK 562

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            A+A+E+GLNFLAVKGPE+F+K+VGESE+A+R +F KARA +PSIIFFDEID ++  R  E
Sbjct: 563  ALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAISGDR--E 620

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            S   S + +V++ LL E+DG+ +   V ++ ATNRP +IDPALLRPGR DR ++VGPP+ 
Sbjct: 621  SANTSAAQQVLTSLLNEIDGVEELKGVVIVGATNRPTEIDPALLRPGRLDRHIFVGPPDY 680

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITM 1007
              R EI +    K   + DV++ E+A  +EGC+GA+++L+C+E+ ++AI EN +AS ++ 
Sbjct: 681  EARLEILKKCCFKFNLTEDVSLHEMATATEGCSGAEVTLLCQESGLAAIMENNNASSVSK 740

Query: 1008 QHLKTAIRHV 1017
            +H + A++ +
Sbjct: 741  KHFEHALKGI 750



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 151/244 (61%), Gaps = 21/244 (8%)

Query: 409 DISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           +  ++GGLSK+ ++L+  I +        S  G+ P +G+LLHGPPGTGKT L +  A +
Sbjct: 239 NFDQVGGLSKQISLLQSTIEVPLHNPQLFSEFGISPPRGILLHGPPGTGKTMLLKCVAQN 298

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEE 525
              ++ ++NGP +VS+  GE+E A+ E+F  A +  P+++F+DE+D++ P+R  +D GE 
Sbjct: 299 IDAHVLSINGPSIVSKYLGETENAIREIFLEARKYQPSIIFMDEVDSLVPSRTSEDSGET 358

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
            S R+VATLL +MDG+  T  V+V+ ATNRP+SI+ ALRRPGR D+E+EI          
Sbjct: 359 ES-RVVATLLTMMDGMNDTGRVVVVGATNRPNSIDSALRRPGRFDQEVEI---------- 407

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLD---SEVEYLSMATHGFVGADLAALCNEAALV 642
                +P    R +IL  L+  M  +  D    ++  +S  THG+VGADL+ALC E+ + 
Sbjct: 408 ----GIPDAEDRFDILSKLVGKMNQAKFDLSEEDIRSVSSKTHGYVGADLSALCRESVMK 463

Query: 643 CLRR 646
            + R
Sbjct: 464 AINR 467



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 151/260 (58%), Gaps = 11/260 (4%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +  ++ VGG  +  + L   +E P  + + F   G  PP GIL+ GPPG  KT++ + VA
Sbjct: 237  RTNFDQVGGLSKQISLLQSTIEVPLHNPQLFSEFGISPPRGILLHGPPGTGKTMLLKCVA 296

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
                 + L++ GP + SK++GE+E A+R +F +AR   PSIIF DE+D L   R  E  G
Sbjct: 297  QNIDAHVLSINGPSIVSKYLGETENAIREIFLEARKYQPSIIFMDEVDSLVPSRTSEDSG 356

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
             + S RV++ LL  +DG++    V V+ ATNRP+ ID AL RPGRFD+ + +G P+  DR
Sbjct: 357  ETES-RVVATLLTMMDGMNDTGRVVVVGATNRPNSIDSALRRPGRFDQEVEIGIPDAEDR 415

Query: 951  EEIFRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             +I    + K+  +    S+ +IR ++  + G  GAD+S +CRE+ + AI   L      
Sbjct: 416  FDILSKLVGKMNQAKFDLSEEDIRSVSSKTHGYVGADLSALCRESVMKAINRGLKNGISQ 475

Query: 1004 ---RITMQHLKTAIRHVQPS 1020
               ++T++ + +++  ++PS
Sbjct: 476  SDIKLTVEDMLSSLPDIRPS 495



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 120/210 (57%), Gaps = 15/210 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T + LG+   KGVLL+GPPG  KT  A+  A +SG+N   V GPE+ ++  GESE+A+ E
Sbjct: 535 TFNKLGVSAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIRE 594

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F  A  ++P+++F DE+DAI+  R+      +Q+++ +LLN +DGV    GV+++ ATN
Sbjct: 595 IFRKARAASPSIIFFDEIDAISGDRESANTSAAQQVLTSLLNEIDGVEELKGVVIVGATN 654

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RP  I+PAL RPGRLDR I +                P    RLEIL         +  D
Sbjct: 655 RPTEIDPALLRPGRLDRHIFV--------------GPPDYEARLEILKKCCFKFNLT-ED 699

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCL 644
             +  ++ AT G  GA++  LC E+ L  +
Sbjct: 700 VSLHEMATATEGCSGAEVTLLCQESGLAAI 729


>gi|448321537|ref|ZP_21511014.1| hypothetical protein C491_11139 [Natronococcus amylolyticus DSM
            10524]
 gi|445603372|gb|ELY57336.1| hypothetical protein C491_11139 [Natronococcus amylolyticus DSM
            10524]
          Length = 726

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 147/285 (51%), Positives = 195/285 (68%), Gaps = 11/285 (3%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A   V PSAMREV +EVP V WEDVGG  E K +L EA++WP +H +A++++   P
Sbjct: 421  DFRSALRGVEPSAMREVFVEVPDVTWEDVGGLEEAKGRLREAIQWPMEHADAYEQVDLSP 480

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+L+ GPPG  KTL+A+AVASE+  NF++VKGPELF K+VGESEK VR +F KARANA
Sbjct: 481  AKGVLLHGPPGTGKTLLAKAVASESQSNFISVKGPELFDKYVGESEKGVREVFEKARANA 540

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIFFDEID +A+ RG  S   +V +RV+SQLL ELDGL +  +V V+AA+NRP+ ID 
Sbjct: 541  PTIIFFDEIDAIASKRGSGSGDSNVGERVVSQLLTELDGLEELEDVVVVAASNRPELIDD 600

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR + V  P+   R EIFRIH +  P ++DV++  LA  +EG TGAD+  IC
Sbjct: 601  ALLRPGRLDRHVEVAEPDRDARREIFRIHTQNRPLAADVDLDTLAEETEGYTGADVEAIC 660

Query: 989  REAAISAIEE-----------NLDASRITMQHLKTAIRHVQPSEI 1022
            REAA  A+ E           +++A  +T  H + A+  + P  +
Sbjct: 661  REAATIAVREHVEREAAGKDSDVEAIELTADHFERALEEISPDAV 705



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/268 (43%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E P V +EDVGG  +   Q+ E +E P +H E F+ +G  PP G+L+ GPPG  KTL+AR
Sbjct: 167  EAPTVTYEDVGGLDDELEQVREMIELPMRHPELFRTLGIDPPKGVLLHGPPGTGKTLIAR 226

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   +F ++ GPE+ SK+ GESE+ +R +F +A  N P+I+F DE+D +A  R  E
Sbjct: 227  AVANEVDAHFHSISGPEIMSKYYGESEEQLREVFEEAAENEPAIVFIDELDSIAPKR--E 284

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
                 V  RV++QLL  +DGL  R  +TVI  TNR D IDPAL R GRFDR + +G P+ 
Sbjct: 285  DVQGDVERRVVAQLLSLMDGLEDRGEITVIGTTNRVDAIDPALRRGGRFDREIEIGAPDT 344

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDA 1002
              REEI +IH R +P S DV++   A  + G  GAD+  + +EAA++A+     E +L+A
Sbjct: 345  GGREEILQIHTRGMPLSEDVDLARFAENTHGFVGADLESLAKEAAMTAMRRLRPELDLEA 404

Query: 1003 SRITMQHL----------KTAIRHVQPS 1020
              I  + L          ++A+R V+PS
Sbjct: 405  DEIDAEVLEKIEVTGGDFRSALRGVEPS 432



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/235 (45%), Positives = 147/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +         +LG+ P KGVLLHGPPGTGKT +AR  A++   +
Sbjct: 176 VGGLDDELEQVREMIELPMRHPELFRTLGIDPPKGVLLHGPPGTGKTLIARAVANEVDAH 235

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE+ L EVF+ A+++ PA+VFIDELD+IAP R+D   ++ +R+V
Sbjct: 236 FHSISGPEIMSKYYGESEEQLREVFEEAAENEPAIVFIDELDSIAPKREDVQGDVERRVV 295

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     + VI  TNR D+I+PALRR GR DREIEI                
Sbjct: 296 AQLLSLMDGLEDRGEITVIGTTNRVDAIDPALRRGGRFDREIEI--------------GA 341

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S  D ++   +  THGFVGADL +L  EAA+  +RR
Sbjct: 342 PDTGGREEILQIHTRGMPLS-EDVDLARFAENTHGFVGADLESLAKEAAMTAMRR 395



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/267 (37%), Positives = 146/267 (54%), Gaps = 22/267 (8%)

Query: 385 KSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLR 442
           +S   G  P+A  E F  V     +D+   GGL +    L++ I            + L 
Sbjct: 423 RSALRGVEPSAMREVFVEVPDVTWEDV---GGLEEAKGRLREAIQWPMEHADAYEQVDLS 479

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P KGVLLHGPPGTGKT LA+  A +S  N  +V GPE+  +  GESE+ + EVF+ A  +
Sbjct: 480 PAKGVLLHGPPGTGKTLLAKAVASESQSNFISVKGPELFDKYVGESEKGVREVFEKARAN 539

Query: 503 APAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           AP ++F DE+DAIA  R  G  +  + +R+V+ LL  +DG+   + V+V+AA+NRP+ I+
Sbjct: 540 APTIIFFDEIDAIASKRGSGSGDSNVGERVVSQLLTELDGLEELEDVVVVAASNRPELID 599

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
            AL RPGRLDR +E+              A P    R EI   + +       D +++ L
Sbjct: 600 DALLRPGRLDRHVEV--------------AEPDRDARREIFR-IHTQNRPLAADVDLDTL 644

Query: 621 SMATHGFVGADLAALCNEAALVCLRRY 647
           +  T G+ GAD+ A+C EAA + +R +
Sbjct: 645 AEETEGYTGADVEAICREAATIAVREH 671


>gi|409075135|gb|EKM75519.1| hypothetical protein AGABI1DRAFT_79853 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 765

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 140/279 (50%), Positives = 198/279 (70%)

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
            G   KL + +   +   VRPSAMR + +E P++++ D+GGQ  V  +L EAVEWP +H  
Sbjct: 464  GVPSKLTISELASSLPAVRPSAMRSLFVETPQIRYSDIGGQGAVIQKLREAVEWPLQHPR 523

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
            AFKR+G R P G+L++GPPGCSKT++ARA A E+G+NF+AVKGPEL +K+VGESE+ VR 
Sbjct: 524  AFKRLGVRAPKGLLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKYVGESERGVRE 583

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAA 919
            +F KARA APSII FDE+D LA  RG         + V++ LL E+DG+ + V VT+IAA
Sbjct: 584  IFRKARAAAPSIILFDEVDALATSRGSSPMEQGSHEGVLTSLLNEIDGVQELVGVTIIAA 643

Query: 920  TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 979
            TNRP+ ID AL+RPGR DR+LYVGPP+++ REEI RI L+ +    +++I  LA   +GC
Sbjct: 644  TNRPEVIDSALMRPGRLDRILYVGPPDQSGREEILRIKLKNMSVEDNIDIGGLANACQGC 703

Query: 980  TGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            +GA+I+ IC+EAAI  + ++++A  ++ +   TA   +Q
Sbjct: 704  SGAEITAICQEAAILEMRQDINAPFVSQKSFVTAAEAIQ 742



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 176/307 (57%), Gaps = 30/307 (9%)

Query: 356 TESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLP---NAQIEFQNVQATVEQDISK 412
           T S D     + +  ETK+      +  S  L +   P    A+IE    Q + +   S 
Sbjct: 172 TLSFDSRPQIWTVTWETKI------SQSSNHLPQSNTPRAHKAEIEILGHQ-SADDAYSS 224

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K+ A +KD++    ++  L    GL+P +G+LLHGPPGTGKT LAR  A  +  +
Sbjct: 225 VGGLEKQIAEIKDLVEIPLIRPDLFRYFGLKPPRGILLHGPPGTGKTHLARAIASSTKSS 284

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRM 530
           +  +NGPE+ S  +GE+E  L +VF  A + +P +V +DE+DA+AP R+DG G E+ +R+
Sbjct: 285 VLVINGPELSSAYHGETESKLRDVFKEAREKSPCIVVLDEVDALAPRREDGAGGEVEKRV 344

Query: 531 VATLLNLMDGV----CRTDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           VATLL  +DG+     +T G V+VI  TNRP++I+PALRRPGR DREIEI          
Sbjct: 345 VATLLTTLDGMEDEGEQTQGRVVVIGTTNRPNAIDPALRRPGRFDREIEI---------- 394

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              A VP    R  IL  LL    HS+ D ++   +   HG+VGADLAA+  EA  + ++
Sbjct: 395 ---AGVPDAQARFSILKVLLKNTPHSISDEDLASFASRAHGYVGADLAAIVREAGTIAIK 451

Query: 646 RYSKIQT 652
           R+  + +
Sbjct: 452 RWMAVSS 458



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 149/268 (55%), Gaps = 18/268 (6%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +   ++ + VE P    + F+  G +PP GIL+ GPPG  KT +ARA+AS  
Sbjct: 222  YSSVGGLEKQIAEIKDLVEIPLIRPDLFRYFGLKPPRGILLHGPPGTGKTHLARAIASST 281

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GPEL S + GE+E  +R +F +AR  +P I+  DE+D LA  R ++  G  V
Sbjct: 282  KSSVLVINGPELSSAYHGETESKLRDVFKEAREKSPCIVVLDEVDALAP-RREDGAGGEV 340

Query: 894  SDRVMSQLLVELDGL-----HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV-GPPNE 947
              RV++ LL  LDG+       +  V VI  TNRP+ IDPAL RPGRFDR + + G P+ 
Sbjct: 341  EKRVVATLLTTLDGMEDEGEQTQGRVVVIGTTNRPNAIDPALRRPGRFDREIEIAGVPDA 400

Query: 948  TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDA---- 1002
              R  I ++ L+  P S SD ++   A  + G  GAD++ I REA   AI+  +      
Sbjct: 401  QARFSILKVLLKNTPHSISDEDLASFASRAHGYVGADLAAIVREAGTIAIKRWMAVSSQE 460

Query: 1003 ------SRITMQHLKTAIRHVQPSEIHS 1024
                  S++T+  L +++  V+PS + S
Sbjct: 461  PDGGVPSKLTISELASSLPAVRPSAMRS 488



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 19/211 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+R  KG+LL+GPPG  KT LAR CA +SGVN   V GPE++++  GESE+ + E+F  
Sbjct: 528 LGVRAPKGLLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKYVGESERGVREIFRK 587

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELS--QRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A  +AP+++  DE+DA+A +R     E    + ++ +LLN +DGV    GV +IAATNRP
Sbjct: 588 ARAAAPSIILFDEVDALATSRGSSPMEQGSHEGVLTSLLNEIDGVQELVGVTIIAATNRP 647

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS- 615
           + I+ AL RPGRLDR           +L   P   P  + R EIL   L  M  S+ D+ 
Sbjct: 648 EVIDSALMRPGRLDR-----------ILYVGP---PDQSGREEILRIKLKNM--SVEDNI 691

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++  L+ A  G  GA++ A+C EAA++ +R+
Sbjct: 692 DIGGLANACQGCSGAEITAICQEAAILEMRQ 722


>gi|367014131|ref|XP_003681565.1| hypothetical protein TDEL_0E01110 [Torulaspora delbrueckii]
 gi|359749226|emb|CCE92354.1| hypothetical protein TDEL_0E01110 [Torulaspora delbrueckii]
          Length = 778

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 147/304 (48%), Positives = 206/304 (67%), Gaps = 20/304 (6%)

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
            G ALK+ + D E A  +VRPSAMRE+ LE+PKV W D+GGQ E+K +++E ++ P +  E
Sbjct: 478  GRALKVCMEDLENAMAEVRPSAMREIFLEMPKVYWSDIGGQEELKRKMVEMIQLPLEASE 537

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
             F R+G   P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+F+K+VGESE+A+R 
Sbjct: 538  TFSRLGVSAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIRE 597

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAA 919
            +F KARA APSIIFFDEID L+  R   S   S +  V++ LL E+DG+ +   V ++ A
Sbjct: 598  IFRKARAAAPSIIFFDEIDALSPDRDGPSS--SAAGHVLTSLLNEIDGVEELNGVVIVGA 655

Query: 920  TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS--------DVNIRE 971
            TNRPD+IDPALLRPGR DR +YV PP+   R +I         CSS        D ++  
Sbjct: 656  TNRPDEIDPALLRPGRLDRHIYVAPPDYAARLQIL------TKCSSKFSTEEEPDYDLEN 709

Query: 972  LACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKE 1027
            LA  +EGC+GA++ L+C+EA ++AI ENLD  R+  +H + A+    R + P  +  Y+ 
Sbjct: 710  LARRTEGCSGAEVVLLCQEAGLAAIMENLDTKRVEARHFEKALSGISRGITPEMLEYYRA 769

Query: 1028 LSAK 1031
             + +
Sbjct: 770  FAMR 773



 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 188/319 (58%), Gaps = 42/319 (13%)

Query: 344 ADLTNER----SQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEF 399
           AD+T+++    S+ ++ +S D  SN ++  +E  +YL PP+       R+G+    +I+F
Sbjct: 178 ADVTDDKLPDISKCEINDSND--SNDYI--NEDPLYLSPPV-----LFRKGS---TKIKF 225

Query: 400 Q-----NVQATVEQ--DISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHG 451
                 N +  + Q  D S +GGL+KE   LK  I     + TL +   + P +GVLLHG
Sbjct: 226 TSSREPNAKYNLPQALDYSLVGGLAKEIDSLKKTIELPLHQPTLFTRFAVSPPRGVLLHG 285

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT L R  A+    ++ T+NGP +VS+  GE+E  L E+FD A +  P+++FIDE
Sbjct: 286 PPGTGKTMLLRCFANTCNAHVLTINGPSIVSKFLGETEATLREIFDEAKKYQPSIIFIDE 345

Query: 512 LDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLD 570
           +D+IAP R  D   E   R+VATLL LMDG+     V+V+AATNRP++++PALRRPGR D
Sbjct: 346 IDSIAPNRAHDDSGEAESRVVATLLTLMDGMGGAGRVVVVAATNRPNAVDPALRRPGRFD 405

Query: 571 REIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME---HSLLDSEVEYLSMATHGF 627
           +E+EI              AVP    RLEIL      M    H+L D ++  ++  THG+
Sbjct: 406 QEVEI--------------AVPDVDARLEILKKQFDKMNSDLHTLSDDDIRNIASRTHGY 451

Query: 628 VGADLAALCNEAALVCLRR 646
           VGADL ALC E+ +  ++R
Sbjct: 452 VGADLIALCRESVMKAIQR 470



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 177/341 (51%), Gaps = 29/341 (8%)

Query: 748  VDFEKARMKVRPSAMRE--VILEVPK-VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            V F K   K++ ++ RE      +P+ + +  VGG  +    L + +E P      F R 
Sbjct: 214  VLFRKGSTKIKFTSSREPNAKYNLPQALDYSLVGGLAKEIDSLKKTIELPLHQPTLFTRF 273

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
               PP G+L+ GPPG  KT++ R  A+    + L + GP + SK++GE+E  +R +F +A
Sbjct: 274  AVSPPRGVLLHGPPGTGKTMLLRCFANTCNAHVLTINGPSIVSKFLGETEATLREIFDEA 333

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            +   PSIIF DEID +A  R  +  G + S RV++ LL  +DG+     V V+AATNRP+
Sbjct: 334  KKYQPSIIFIDEIDSIAPNRAHDDSGEAES-RVVATLLTLMDGMGGAGRVVVVAATNRPN 392

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS----SDVNIRELACLSEGCT 980
             +DPAL RPGRFD+ + +  P+   R EI +    K+       SD +IR +A  + G  
Sbjct: 393  AVDPALRRPGRFDQEVEIAVPDVDARLEILKKQFDKMNSDLHTLSDDDIRNIASRTHGYV 452

Query: 981  GADISLICREAAISAIEENLD------ASRITMQHLKTAIRHVQP--------------- 1019
            GAD+  +CRE+ + AI+  L+      A ++ M+ L+ A+  V+P               
Sbjct: 453  GADLIALCRESVMKAIQRALNPDGVGRALKVCMEDLENAMAEVRPSAMREIFLEMPKVYW 512

Query: 1020 SEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMW 1060
            S+I   +EL  K   ++    EA E+  +L  S   G  ++
Sbjct: 513  SDIGGQEELKRKMVEMIQLPLEASETFSRLGVSAPKGVLLY 553



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 123/211 (58%), Gaps = 15/211 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T S LG+   KGVLL+GPPG  KT  A+  A +SG+N   V GPE+ ++  GESE+A+ E
Sbjct: 538 TFSRLGVSAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIRE 597

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F  A  +AP+++F DE+DA++P R       +  ++ +LLN +DGV   +GV+++ ATN
Sbjct: 598 IFRKARAAAPSIIFFDEIDALSPDRDGPSSSAAGHVLTSLLNEIDGVEELNGVVIVGATN 657

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME-HSLL 613
           RPD I+PAL RPGRLDR I +              A P  A RL+IL    S        
Sbjct: 658 RPDEIDPALLRPGRLDRHIYV--------------APPDYAARLQILTKCSSKFSTEEEP 703

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           D ++E L+  T G  GA++  LC EA L  +
Sbjct: 704 DYDLENLARRTEGCSGAEVVLLCQEAGLAAI 734


>gi|336382196|gb|EGO23346.1| hypothetical protein SERLADRAFT_438665 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 785

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 141/297 (47%), Positives = 206/297 (69%), Gaps = 5/297 (1%)

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
            G  L L L D   +   VRPS MR +  E P V++ D+GGQ  V  +L EAVEWP  H +
Sbjct: 483  GDGLLLNLTDILDSLPSVRPSGMRSLFFETPPVRYADIGGQGVVIQKLREAVEWPLLHPQ 542

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
            AF+R+G RPP G+L++GPPGCSKT++ARA A E+G+NF+AVKGPEL +K+VGESE+AVR 
Sbjct: 543  AFERLGIRPPKGVLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKFVGESERAVRE 602

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIA 918
            +F KARA +PSIIFFDEID L   R    S G    + V++ LL E+DG+ + V VTVIA
Sbjct: 603  IFRKARAASPSIIFFDEIDALGTSRTSAGSSGGGPHEGVLTSLLNEMDGVQELVGVTVIA 662

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEG 978
            ATNRPD ID AL+RPGR DR++YVGPP++  RE+I  I  RK+    +++++++A +++G
Sbjct: 663  ATNRPDVIDSALMRPGRLDRIMYVGPPDQAGREDILAIRTRKMSVEPNLDVKQIAAMTDG 722

Query: 979  CTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            C+GA+I+ +C+EAA+  ++++++A  ++     +A     + + P  +  Y++   K
Sbjct: 723  CSGAEITALCQEAALLTMKKDINAPYVSQDAFISAANALQKQITPEVVRKYEDWQEK 779



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 129/213 (60%), Gaps = 22/213 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+RP KGVLL+GPPG  KT LAR CA +SGVN   V GPE++++  GESE+A+ E+F  
Sbjct: 547 LGIRPPKGVLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKFVGESERAVREIFRK 606

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELS---QRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A  ++P+++F DE+DA+  +R   G       + ++ +LLN MDGV    GV VIAATNR
Sbjct: 607 ARAASPSIIFFDEIDALGTSRTSAGSSGGGPHEGVLTSLLNEMDGVQELVGVTVIAATNR 666

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLL 613
           PD I+ AL RPGRLDR + +                P  A R +IL      M  E +L 
Sbjct: 667 PDVIDSALMRPGRLDRIMYV--------------GPPDQAGREDILAIRTRKMSVEPNL- 711

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             +V+ ++  T G  GA++ ALC EAAL+ +++
Sbjct: 712 --DVKQIAAMTDGCSGAEITALCQEAALLTMKK 742



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 134/253 (52%), Gaps = 33/253 (13%)

Query: 403 QATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           Q+T     + +GGL +    ++D++ I  +        GL+P +G+LLHGPPGTGKT LA
Sbjct: 254 QSTASDAYASVGGLDRTITQIRDLLEIPLTRPELFGYFGLKPPRGILLHGPPGTGKTHLA 313

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
           R  A  +  ++  +NGPE+ S  +GE+E  L +VF  A + +P +V +DE+DA+ P R++
Sbjct: 314 RAIASSTNSSVIIINGPELSSAYHGETESKLRDVFRDAREKSPCIVVLDEVDALVPRREE 373

Query: 522 G-GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           G G E+ +R+VATLL L+DG                  +E      GR+           
Sbjct: 374 GAGGEVEKRVVATLLTLLDG------------------MEDEANGKGRV----------- 404

Query: 581 FSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAA 640
             +L      +P    R  IL  LL+ + HSL + ++  ++   HG+VGADL+A+  EA 
Sbjct: 405 --VLYGDQEGIPDIEARSSILKVLLANVPHSLSEQDIHTIASRAHGYVGADLSAVVREAG 462

Query: 641 LVCLRRYSKIQTS 653
            + ++R+  +  S
Sbjct: 463 TLAIKRWISVNPS 475



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 114/228 (50%), Gaps = 25/228 (10%)

Query: 774 WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
           +  VGG     TQ+ + +E P    E F   G +PP GIL+ GPPG  KT +ARA+AS  
Sbjct: 261 YASVGGLDRTITQIRDLLEIPLTRPELFGYFGLKPPRGILLHGPPGTGKTHLARAIASST 320

Query: 834 GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
             + + + GPEL S + GE+E  +R +F  AR  +P I+  DE+D L   R +E  G  V
Sbjct: 321 NSSVIIINGPELSSAYHGETESKLRDVFRDAREKSPCIVVLDEVDALVP-RREEGAGGEV 379

Query: 894 SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLY---VGPPNETDR 950
             RV++ LL  LDG+    N                    G+   +LY    G P+   R
Sbjct: 380 EKRVVATLLTLLDGMEDEAN--------------------GKGRVVLYGDQEGIPDIEAR 419

Query: 951 EEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIE 997
             I ++ L  +P S S+ +I  +A  + G  GAD+S + REA   AI+
Sbjct: 420 SSILKVLLANVPHSLSEQDIHTIASRAHGYVGADLSAVVREAGTLAIK 467


>gi|146302995|ref|YP_001190311.1| AAA ATPase [Metallosphaera sedula DSM 5348]
 gi|145701245|gb|ABP94387.1| AAA family ATPase, CDC48 subfamily [Metallosphaera sedula DSM 5348]
          Length = 768

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 134/258 (51%), Positives = 195/258 (75%), Gaps = 1/258 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++++ DF  A  ++ PS MRE+ +EVP+VKW+D+GG  E+K +L E  E+P K  + ++
Sbjct: 432  MEVKMEDFMNAFKEIVPSGMREIYIEVPEVKWDDIGGLNEIKEELREVAEYPLKFPDYYE 491

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESE+A+R +F 
Sbjct: 492  TAGVEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESERAIREIFR 551

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  APS+IFFDEID +A +RG  SD   V++R+++QLL E+DG+    NV ++AATNR
Sbjct: 552  KARMYAPSVIFFDEIDAIAPMRGISSDS-GVTERLVNQLLAEMDGIENLDNVVIVAATNR 610

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRF++L+YV PP++  R +I ++H +K+  S +VN+ ELA  +EG TGA
Sbjct: 611  PDILDPALLRPGRFEKLMYVPPPDKNARYDILKVHTKKVALSDEVNLEELAERTEGYTGA 670

Query: 983  DISLICREAAISAIEENL 1000
            D++ + REAA+ AI E +
Sbjct: 671  DLAALVREAAMRAIREGM 688



 Score =  236 bits (601), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 120/266 (45%), Positives = 170/266 (63%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V +ED+GG + V  ++ E VE P +H E FKR+G  PP GI+++GPPG  KTL+A+AV
Sbjct: 186  PRVTYEDIGGMKNVIQKIRELVELPLRHPELFKRLGIEPPKGIMLYGPPGVGKTLLAKAV 245

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DE+D +A  R  E  
Sbjct: 246  ANETESYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEVDAIAPKR-DEVI 304

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R NV VIAATNRP+ +DPAL RPGRFDR + +  P++  
Sbjct: 305  G-EVERRVVAQLLTLMDGLESRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQG 363

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R EI +IH R +P S DV + +LA +S G TGAD+S + REAA++A+             
Sbjct: 364  RLEILQIHTRNMPLSKDVELEKLADISHGYTGADLSALVREAAMNALRRYLPMIDISQDK 423

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L+   + M+    A + + PS
Sbjct: 424  IPPEILERMEVKMEDFMNAFKEIVPS 449



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 140/212 (66%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG++L+GPPG GKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 217 FKRLGIEPPKGIMLYGPPGVGKTLLAKAVANETESYFTSINGPEIMSKFYGESEQRLREI 276

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 277 FEDAKKHAPAIIFIDEVDAIAPKRDEVIGEVERRVVAQLLTLMDGLESRGNVIVIAATNR 336

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREIEI +              P    RLEIL      M  S  D 
Sbjct: 337 PNAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLS-KDV 381

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           E+E L+  +HG+ GADL+AL  EAA+  LRRY
Sbjct: 382 ELEKLADISHGYTGADLSALVREAAMNALRRY 413



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 126/211 (59%), Gaps = 24/211 (11%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+ P KG+LL GPPGTGKT LA+  A +SG N   V GPEV+S+  GESE+A+ E+F  A
Sbjct: 494 GVEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESERAIREIFRKA 553

Query: 500 SQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
              AP+V+F DE+DAIAP R    D G  +++R+V  LL  MDG+   D V+++AATNRP
Sbjct: 554 RMYAPSVIFFDEIDAIAPMRGISSDSG--VTERLVNQLLAEMDGIENLDNVVIVAATNRP 611

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D ++PAL RPGR ++           L+   P   P    R +IL       +   L  E
Sbjct: 612 DILDPALLRPGRFEK-----------LMYVPP---PDKNARYDILKV---HTKKVALSDE 654

Query: 617 V--EYLSMATHGFVGADLAALCNEAALVCLR 645
           V  E L+  T G+ GADLAAL  EAA+  +R
Sbjct: 655 VNLEELAERTEGYTGADLAALVREAAMRAIR 685


>gi|336369414|gb|EGN97755.1| hypothetical protein SERLA73DRAFT_74028 [Serpula lacrymans var.
            lacrymans S7.3]
          Length = 801

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 141/297 (47%), Positives = 206/297 (69%), Gaps = 5/297 (1%)

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
            G  L L L D   +   VRPS MR +  E P V++ D+GGQ  V  +L EAVEWP  H +
Sbjct: 499  GDGLLLNLTDILDSLPSVRPSGMRSLFFETPPVRYADIGGQGVVIQKLREAVEWPLLHPQ 558

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
            AF+R+G RPP G+L++GPPGCSKT++ARA A E+G+NF+AVKGPEL +K+VGESE+AVR 
Sbjct: 559  AFERLGIRPPKGVLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKFVGESERAVRE 618

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIA 918
            +F KARA +PSIIFFDEID L   R    S G    + V++ LL E+DG+ + V VTVIA
Sbjct: 619  IFRKARAASPSIIFFDEIDALGTSRTSAGSSGGGPHEGVLTSLLNEMDGVQELVGVTVIA 678

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEG 978
            ATNRPD ID AL+RPGR DR++YVGPP++  RE+I  I  RK+    +++++++A +++G
Sbjct: 679  ATNRPDVIDSALMRPGRLDRIMYVGPPDQAGREDILAIRTRKMSVEPNLDVKQIAAMTDG 738

Query: 979  CTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            C+GA+I+ +C+EAA+  ++++++A  ++     +A     + + P  +  Y++   K
Sbjct: 739  CSGAEITALCQEAALLTMKKDINAPYVSQDAFISAANALQKQITPEVVRKYEDWQEK 795



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 129/213 (60%), Gaps = 22/213 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+RP KGVLL+GPPG  KT LAR CA +SGVN   V GPE++++  GESE+A+ E+F  
Sbjct: 563 LGIRPPKGVLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKFVGESERAVREIFRK 622

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELS---QRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A  ++P+++F DE+DA+  +R   G       + ++ +LLN MDGV    GV VIAATNR
Sbjct: 623 ARAASPSIIFFDEIDALGTSRTSAGSSGGGPHEGVLTSLLNEMDGVQELVGVTVIAATNR 682

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLL 613
           PD I+ AL RPGRLDR + +                P  A R +IL      M  E +L 
Sbjct: 683 PDVIDSALMRPGRLDRIMYV--------------GPPDQAGREDILAIRTRKMSVEPNL- 727

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             +V+ ++  T G  GA++ ALC EAAL+ +++
Sbjct: 728 --DVKQIAAMTDGCSGAEITALCQEAALLTMKK 758



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 132/253 (52%), Gaps = 37/253 (14%)

Query: 403 QATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           Q+T     + +GGL +    ++D++ I  +        GL+P +G+LLHGPPGTGKT LA
Sbjct: 274 QSTASDAYASVGGLDRTITQIRDLLEIPLTRPELFGYFGLKPPRGILLHGPPGTGKTHLA 333

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
           R  A  +  ++  +NGPE+ S  +GE+E  L +VF  A + +P +V +DE+DA+ P R++
Sbjct: 334 RAIASSTNSSVIIINGPELSSAYHGETESKLRDVFRDAREKSPCIVVLDEVDALVPRREE 393

Query: 522 G-GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           G G E+ +R+VATLL L+DG                  +E      GR+           
Sbjct: 394 GAGGEVEKRVVATLLTLLDG------------------MEDEANGKGRV----------- 424

Query: 581 FSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAA 640
                     +P    R  IL  LL+ + HSL + ++  ++   HG+VGADL+A+  EA 
Sbjct: 425 ------VVIGIPDIEARSSILKVLLANVPHSLSEQDIHTIASRAHGYVGADLSAVVREAG 478

Query: 641 LVCLRRYSKIQTS 653
            + ++R+  +  S
Sbjct: 479 TLAIKRWISVNPS 491



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 115/225 (51%), Gaps = 23/225 (10%)

Query: 774 WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
           +  VGG     TQ+ + +E P    E F   G +PP GIL+ GPPG  KT +ARA+AS  
Sbjct: 281 YASVGGLDRTITQIRDLLEIPLTRPELFGYFGLKPPRGILLHGPPGTGKTHLARAIASST 340

Query: 834 GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
             + + + GPEL S + GE+E  +R +F  AR  +P I+  DE+D L   R +E  G  V
Sbjct: 341 NSSVIIINGPELSSAYHGETESKLRDVFRDAREKSPCIVVLDEVDALVP-RREEGAGGEV 399

Query: 894 SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
             RV++ LL  LDG+    N                    G+  R++ +G P+   R  I
Sbjct: 400 EKRVVATLLTLLDGMEDEAN--------------------GK-GRVVVIGIPDIEARSSI 438

Query: 954 FRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIE 997
            ++ L  +P S S+ +I  +A  + G  GAD+S + REA   AI+
Sbjct: 439 LKVLLANVPHSLSEQDIHTIASRAHGYVGADLSAVVREAGTLAIK 483


>gi|426191690|gb|EKV41631.1| hypothetical protein AGABI2DRAFT_189093 [Agaricus bisporus var.
            bisporus H97]
          Length = 787

 Score =  300 bits (767), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 140/279 (50%), Positives = 198/279 (70%)

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
            G   KL + +   +   VRPSAMR + +E P++++ D+GGQ  V  +L EAVEWP +H  
Sbjct: 486  GVPSKLTISELASSLPAVRPSAMRSLFVETPQIRYSDIGGQGAVIQKLREAVEWPLQHPR 545

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
            AFKR+G R P G+L++GPPGCSKT++ARA A E+G+NF+AVKGPEL +K+VGESE+ VR 
Sbjct: 546  AFKRLGVRAPKGLLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKYVGESERGVRE 605

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAA 919
            +F KARA APSII FDE+D LA  RG         + V++ LL E+DG+ + V VT+IAA
Sbjct: 606  IFRKARAAAPSIILFDEVDALATSRGSSPMEQGSHEGVLTSLLNEIDGVQELVGVTIIAA 665

Query: 920  TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 979
            TNRP+ ID AL+RPGR DR+LYVGPP+++ REEI RI L+ +    +++I  LA   +GC
Sbjct: 666  TNRPEVIDSALMRPGRLDRILYVGPPDQSGREEILRIKLKNMSVEDNIDIGGLANACQGC 725

Query: 980  TGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            +GA+I+ IC+EAAI  + ++++A  ++ +   TA   +Q
Sbjct: 726  SGAEITAICQEAAILEMRQDINAPFVSQKSFVTAAEAIQ 764



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 108/249 (43%), Positives = 155/249 (62%), Gaps = 20/249 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL K+ A +KD++    ++  L    GL+P +G+LLHGPPGTGKT LAR  A  + 
Sbjct: 245 SSVGGLEKQIAEIKDLVEIPLIRPDLFRYFGLKPPRGILLHGPPGTGKTHLARAIASSTK 304

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQ 528
            ++  +NGPE+ S  +GE+E  L +VF  A + +P +V +DE+DA+AP R+DG G E+ +
Sbjct: 305 SSVLVINGPELSSAYHGETESKLRDVFKEAREKSPCIVVLDEVDALAPRREDGAGGEVEK 364

Query: 529 RMVATLLNLMDGV----CRTDG-VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSL 583
           R+VATLL  +DG+     +T G V+VI  TNRP++I+PALRRPGR DREIEI        
Sbjct: 365 RVVATLLTTLDGMEDEGEQTQGRVVVIGTTNRPNAIDPALRRPGRFDREIEI-------- 416

Query: 584 LKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
                A VP    R  IL  LL    HS+ D ++   +   HG+VGADLAA+  EA  + 
Sbjct: 417 -----AGVPDAQARFSILKVLLKNTPHSISDEDLASFASRAHGYVGADLAAIVREAGTIA 471

Query: 644 LRRYSKIQT 652
           ++R+  + +
Sbjct: 472 IKRWMAVSS 480



 Score =  168 bits (426), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 149/268 (55%), Gaps = 18/268 (6%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +   ++ + VE P    + F+  G +PP GIL+ GPPG  KT +ARA+AS  
Sbjct: 244  YSSVGGLEKQIAEIKDLVEIPLIRPDLFRYFGLKPPRGILLHGPPGTGKTHLARAIASST 303

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GPEL S + GE+E  +R +F +AR  +P I+  DE+D LA  R ++  G  V
Sbjct: 304  KSSVLVINGPELSSAYHGETESKLRDVFKEAREKSPCIVVLDEVDALAP-RREDGAGGEV 362

Query: 894  SDRVMSQLLVELDGL-----HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV-GPPNE 947
              RV++ LL  LDG+       +  V VI  TNRP+ IDPAL RPGRFDR + + G P+ 
Sbjct: 363  EKRVVATLLTTLDGMEDEGEQTQGRVVVIGTTNRPNAIDPALRRPGRFDREIEIAGVPDA 422

Query: 948  TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDA---- 1002
              R  I ++ L+  P S SD ++   A  + G  GAD++ I REA   AI+  +      
Sbjct: 423  QARFSILKVLLKNTPHSISDEDLASFASRAHGYVGADLAAIVREAGTIAIKRWMAVSSQE 482

Query: 1003 ------SRITMQHLKTAIRHVQPSEIHS 1024
                  S++T+  L +++  V+PS + S
Sbjct: 483  PDGGVPSKLTISELASSLPAVRPSAMRS 510



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 19/211 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+R  KG+LL+GPPG  KT LAR CA +SGVN   V GPE++++  GESE+ + E+F  
Sbjct: 550 LGVRAPKGLLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKYVGESERGVREIFRK 609

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELS--QRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A  +AP+++  DE+DA+A +R     E    + ++ +LLN +DGV    GV +IAATNRP
Sbjct: 610 ARAAAPSIILFDEVDALATSRGSSPMEQGSHEGVLTSLLNEIDGVQELVGVTIIAATNRP 669

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS- 615
           + I+ AL RPGRLDR           +L   P   P  + R EIL   L  M  S+ D+ 
Sbjct: 670 EVIDSALMRPGRLDR-----------ILYVGP---PDQSGREEILRIKLKNM--SVEDNI 713

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++  L+ A  G  GA++ A+C EAA++ +R+
Sbjct: 714 DIGGLANACQGCSGAEITAICQEAAILEMRQ 744


>gi|157117221|ref|XP_001652994.1| spermatogenesis associated factor [Aedes aegypti]
 gi|108876138|gb|EAT40363.1| AAEL007899-PA [Aedes aegypti]
          Length = 470

 Score =  300 bits (767), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 137/270 (50%), Positives = 196/270 (72%), Gaps = 1/270 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
             E+A   V+PSAMRE+++E P + W D+GGQ ++K QL + ++WP    E F R+G   P
Sbjct: 183  MEQALQFVKPSAMREILIESPNIHWSDIGGQHDLKLQLQQIIDWPIHRPEIFARLGISAP 242

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+LMFGPPGCSKT++A+A+A+E+ LNFL++KG ELFS WVGESE+AVR LF KAR  AP
Sbjct: 243  RGLLMFGPPGCSKTMIAKAIATESKLNFLSIKGSELFSMWVGESERAVRELFRKARQVAP 302

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
            SIIFFDEID +   R  ES G SV +RV++Q+L E+DG+    NV ++AATNRPD ID A
Sbjct: 303  SIIFFDEIDAIGGERSAES-GSSVKERVLAQILTEIDGVSALKNVKIVAATNRPDLIDKA 361

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            L+RPGR DR++YV  P+   R+EI +I L +IP + +V+I +L   ++G +G++I  +C+
Sbjct: 362  LMRPGRLDRIIYVKLPDGQTRKEILKIKLSRIPVAVEVSIDDLVDSTDGYSGSEIEAVCQ 421

Query: 990  EAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            EA + A+EE+ DA+ I+ ++   A+  V+P
Sbjct: 422  EAVLKALEESFDATEISRKYFDHALMVVKP 451



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 121/210 (57%), Gaps = 16/210 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG+   +G+L+ GPPG  KT +A+  A +S +N  ++ G E+ S   GESE+A+ E+
Sbjct: 234 FARLGISAPRGLLMFGPPGCSKTMIAKAIATESKLNFLSIKGSELFSMWVGESERAVREL 293

Query: 496 FDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q AP+++F DE+DAI   R  + G  + +R++A +L  +DGV     V ++AATN
Sbjct: 294 FRKARQVAPSIIFFDEIDAIGGERSAESGSSVKERVLAQILTEIDGVSALKNVKIVAATN 353

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+ AL RPGRLDR I + +              P    R EIL   LS +  + ++
Sbjct: 354 RPDLIDKALMRPGRLDRIIYVKL--------------PDGQTRKEILKIKLSRIPVA-VE 398

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCL 644
             ++ L  +T G+ G+++ A+C EA L  L
Sbjct: 399 VSIDDLVDSTDGYSGSEIEAVCQEAVLKAL 428



 Score = 94.4 bits (233), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 21/173 (12%)

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAP--AVVFIDELDAIAPARKDGGEELSQR 529
           +  ++  E+ S+ YGE+E  L ++FD A  + P   +V I+E+  I P  K    ++ +R
Sbjct: 14  IVKIDCSEIFSKFYGETEANLKKLFDKAINNYPNPTIVVIEEIHNICP--KTESSDIIKR 71

Query: 530 MVATLLNLMDGV---CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           +    +NLMD +    +   +++++ T+ PD++ P+LRR GR+D E E+           
Sbjct: 72  ISHFFVNLMDSLHTSSKASRMVILSTTDNPDNLHPSLRRGGRIDYEFEL----------- 120

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
               +P    R EIL  +L+  +HSL   +V+ +S+ THG+VGADL +L   A
Sbjct: 121 ---PIPDAQAREEILWKILALHKHSLQMEDVKKISLVTHGYVGADLVSLVGRA 170



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 22/206 (10%)

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP--SIIFFDEIDGLA 881
            ++  ++A+      + +   E+FSK+ GE+E  ++ LF KA  N P  +I+  +EI  + 
Sbjct: 1    MLVNSLANHFNCLIVKIDCSEIFSKFYGETEANLKKLFDKAINNYPNPTIVVIEEIHNIC 60

Query: 882  AIRGKESDGVSVSDRVMSQLLVEL-DGLH---QRVNVTVIAATNRPDKIDPALLRPGRFD 937
              + + SD +    + +S   V L D LH   +   + +++ T+ PD + P+L R GR D
Sbjct: 61   P-KTESSDII----KRISHFFVNLMDSLHTSSKASRMVILSTTDNPDNLHPSLRRGGRID 115

Query: 938  RLLYVGPPNETDREEIFR--IHLRKIPCSSDVNIRELACLSEGCTGAD-ISLICREAAIS 994
                +  P+   REEI    + L K     + ++++++ ++ G  GAD +SL+ R     
Sbjct: 116  YEFELPIPDAQAREEILWKILALHKHSLQME-DVKKISLVTHGYVGADLVSLVGR----- 169

Query: 995  AIEENLDASRITMQHLKTAIRHVQPS 1020
            AI E  DA  +   H++ A++ V+PS
Sbjct: 170  AIHET-DAV-VNYNHMEQALQFVKPS 193


>gi|365759248|gb|EHN01048.1| Afg2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 622

 Score =  299 bits (766), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 140/295 (47%), Positives = 209/295 (70%), Gaps = 7/295 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P +  E F
Sbjct: 325  SLIVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQDELKTKMKEMIQLPLEASETF 384

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NF AVKGPE+F+K+VGESE+A+R +F
Sbjct: 385  ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFFAVKGPEVFNKYVGESERAIREIF 444

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ APSIIFFDEID L+ +R  +    S ++ V++ LL E+DG+ +   V ++AATN
Sbjct: 445  RKARSAAPSIIFFDEIDALSPVR--DGGSTSAANHVLTSLLNEIDGVEELKGVVIVAATN 502

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 980
            RPD+ID ALLRPGR DR +YVGPP+   R EI +   +K     S V+++ELA  ++G +
Sbjct: 503  RPDEIDGALLRPGRLDRHIYVGPPDANARLEILKKCTKKFNTEGSGVDLQELAARTKGYS 562

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA++ L+C+EA ++AI E+LD +++  +H + A     R + P  +  Y+E + +
Sbjct: 563  GAEVVLLCQEAGLAAIMEDLDVTKVEFRHFEKAFKGIARGITPEMLLYYEEFALR 617



 Score =  209 bits (531), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 185/312 (59%), Gaps = 35/312 (11%)

Query: 347 TNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEF-QNVQAT 405
           T++ S P V++ +D  S+    +   + YL PP        R+G+     I F + +QA+
Sbjct: 25  TSDGSLPDVSQ-LDLNSDEVYGSSNGQYYLSPP-----SIFRKGS---THIAFTKEMQAS 75

Query: 406 VEQDI------SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
            + ++      + +GGLSKE   LK  I I     +  SS G+ P +G+LLHGPPGTGKT
Sbjct: 76  RKYNLPEPISYAAVGGLSKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKT 135

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            L R+ A+ S  ++ T+NGP +VS+  GE+E AL E+F+ A +  P+++FIDE+D+IAP 
Sbjct: 136 MLLRVVANTSNAHVLTINGPSIVSKYLGETESALREIFNEARKYQPSIIFIDEIDSIAPN 195

Query: 519 R-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
           R  D   E+  R+VATLL LMDG+     ++VIAATNRP+ ++PALRRPGR D+E+EI  
Sbjct: 196 RANDDSGEVESRVVATLLTLMDGMGAAGRLIVIAATNRPNCVDPALRRPGRFDQEVEI-- 253

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAA 634
                        +P    R +IL    S M    H+L   E+++++  THG+VGADL A
Sbjct: 254 ------------GIPDVDARFDILTRQFSKMSPDRHALNLEEIKHIASKTHGYVGADLTA 301

Query: 635 LCNEAALVCLRR 646
           LC E+ +  ++R
Sbjct: 302 LCRESVMKTIQR 313



 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 167/316 (52%), Gaps = 28/316 (8%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +  VGG  +    L  A+E P      F   G  PP GIL+ GPPG  KT++ R VA+
Sbjct: 84   ISYAAVGGLSKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 143

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
             +  + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID +A  R  +  G 
Sbjct: 144  TSNAHVLTINGPSIVSKYLGETESALREIFNEARKYQPSIIFIDEIDSIAPNRANDDSG- 202

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++ LL  +DG+     + VIAATNRP+ +DPAL RPGRFD+ + +G P+   R 
Sbjct: 203  EVESRVVATLLTLMDGMGAAGRLIVIAATNRPNCVDPALRRPGRFDQEVEIGIPDVDARF 262

Query: 952  EIFRIHLRKI-PCSSDVN---IRELACLSEGCTGADISLICREAAISAIEENL----DAS 1003
            +I      K+ P    +N   I+ +A  + G  GAD++ +CRE+ +  I+  L    D  
Sbjct: 263  DILTRQFSKMSPDRHALNLEEIKHIASKTHGYVGADLTALCRESVMKTIQRGLGMDADID 322

Query: 1004 R----ITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADE 1044
            +    +T++ +++A+  ++P               S+I    EL  K + ++    EA E
Sbjct: 323  KFSLIVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQDELKTKMKEMIQLPLEASE 382

Query: 1045 SGYQLRPSKSIGSNMW 1060
            +  +L  S   G  ++
Sbjct: 383  TFARLGISAPKGVLLY 398



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 90/235 (38%), Positives = 132/235 (56%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 358 SDIGGQDELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 417

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N F V GPEV ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R  G    +  
Sbjct: 418 INFFAVKGPEVFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPVRDGGSTSAANH 477

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV    GV+++AATNRPD I+ AL RPGRLDR I +              
Sbjct: 478 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDGALLRPGRLDRHIYV-------------- 523

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RLEIL              +++ L+  T G+ GA++  LC EA L  +
Sbjct: 524 GPPDANARLEILKKCTKKFNTEGSGVDLQELAARTKGYSGAEVVLLCQEAGLAAI 578


>gi|401624562|gb|EJS42618.1| afg2p [Saccharomyces arboricola H-6]
          Length = 780

 Score =  299 bits (766), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 143/290 (49%), Positives = 207/290 (71%), Gaps = 6/290 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P +  E F
Sbjct: 483  SLKVTLKDVENAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 543  ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEVFNKYVGESERAIREIF 602

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ APSIIFFDEID L+  R  +    S +  V++ LL E+DG+ +   V ++AATN
Sbjct: 603  RKARSAAPSIIFFDEIDALSPDR--DGGSTSAASHVLTSLLNEIDGVEELKGVVIVAATN 660

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 980
            RPD+ID ALLRPGR DR +YVGPP+   R EIF+   +K     S V++ ELA  ++G +
Sbjct: 661  RPDEIDAALLRPGRLDRHIYVGPPDINARLEIFKKCTKKFNIEESGVDLDELANRTDGYS 720

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS---EIHSYKE 1027
            GA++ L+C+EA ++AI E+LD +++ ++H + A   +      E+ SY E
Sbjct: 721  GAEVVLLCQEAGLAAIMEDLDVTKVELRHFEKAFEGIAKGITPEMLSYYE 770



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 148/390 (37%), Positives = 216/390 (55%), Gaps = 47/390 (12%)

Query: 290 DIKEVLEDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPADLTNE 349
           DI E +E++   KLL     S +    ++  NL       E SI +VI      AD  ++
Sbjct: 138 DILECIEEKVIQKLLDD---SGILMPGMIFHNLKT--KTGEESIDIVI------ADAGDD 186

Query: 350 RSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEF-QNVQATVEQ 408
            S P V++ +D  SN F  +   + YL PP        R+G+    +I F +  QA  + 
Sbjct: 187 -SLPDVSQ-LDLNSNEFHGDINGQFYLSPPF-----IFRKGS---TRINFTKETQANRKY 236

Query: 409 DI------SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           ++      S +GGL+KE   LK  I I     +  SS G+ P +G+LLHGPPGTGKT L 
Sbjct: 237 NLPEPISYSAVGGLNKEIESLKSAIDIPLHQPALFSSFGVSPPRGILLHGPPGTGKTMLL 296

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-K 520
           R+ A+ S  ++ T+NGP +VS+  GE+E AL ++F+ A +  P++VFIDE+D+IAP R  
Sbjct: 297 RVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIVFIDEIDSIAPNRAN 356

Query: 521 DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           D   E+  R+VATLL LMDG+     ++VIAATNRP+S++PALRRPGR D+E+EI     
Sbjct: 357 DDSGEVESRVVATLLTLMDGMGAAGRLVVIAATNRPNSVDPALRRPGRFDQEVEI----- 411

Query: 581 FSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLLDSE-VEYLSMATHGFVGADLAALCN 637
                     +P    R +IL      M  +  +LDSE ++ ++  THG+VGADL ALC 
Sbjct: 412 ---------GIPDVDARFDILTKQFLRMSPDRHVLDSEGIKLIASKTHGYVGADLTALCR 462

Query: 638 EAALVCLRRYSKIQTSSDVLHSTGTLFEFE 667
           E+ +  ++R     T+ D      TL + E
Sbjct: 463 ESVMKTIQRGLGTSTNIDKFSLKVTLKDVE 492



 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 165/316 (52%), Gaps = 28/316 (8%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +  VGG  +    L  A++ P      F   G  PP GIL+ GPPG  KT++ R VA+
Sbjct: 242  ISYSAVGGLNKEIESLKSAIDIPLHQPALFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
             +  + L + GP + SK++GE+E A+R +F +AR   PSI+F DEID +A  R  +  G 
Sbjct: 302  TSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIVFIDEIDSIAPNRANDDSG- 360

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++ LL  +DG+     + VIAATNRP+ +DPAL RPGRFD+ + +G P+   R 
Sbjct: 361  EVESRVVATLLTLMDGMGAAGRLVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARF 420

Query: 952  EIFRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIEENLDAS---- 1003
            +I      ++     V     I+ +A  + G  GAD++ +CRE+ +  I+  L  S    
Sbjct: 421  DILTKQFLRMSPDRHVLDSEGIKLIASKTHGYVGADLTALCRESVMKTIQRGLGTSTNID 480

Query: 1004 ----RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADE 1044
                ++T++ ++ A+  ++P               S+I   +EL  K + ++    EA E
Sbjct: 481  KFSLKVTLKDVENAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASE 540

Query: 1045 SGYQLRPSKSIGSNMW 1060
            +  +L  S   G  ++
Sbjct: 541  TFARLGISAPKGVLLY 556



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/237 (38%), Positives = 134/237 (56%), Gaps = 19/237 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 516 SDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 575

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPEV ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R  G    +  
Sbjct: 576 INFLAVKGPEVFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGGSTSAASH 635

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV    GV+++AATNRPD I+ AL RPGRLDR I +              
Sbjct: 636 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYV-------------- 681

Query: 590 AVPSPAQRLEILHALLS--GMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RLEI         +E S +D  ++ L+  T G+ GA++  LC EA L  +
Sbjct: 682 GPPDINARLEIFKKCTKKFNIEESGVD--LDELANRTDGYSGAEVVLLCQEAGLAAI 736


>gi|48477528|ref|YP_023234.1| cell division cycle protein 48 [Picrophilus torridus DSM 9790]
 gi|48430176|gb|AAT43041.1| cell division cycle protein 48 [Picrophilus torridus DSM 9790]
          Length = 744

 Score =  299 bits (765), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 143/290 (49%), Positives = 200/290 (68%), Gaps = 5/290 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   + PS++REV +EVP VKW+D+GG   VK++L EAVE P  + + FKR+G R 
Sbjct: 440  DFMEALKTIEPSSLREVTVEVPNVKWDDIGGLENVKSELREAVELPLLNPDVFKRLGIRA 499

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G L++GPPG  KTL+A+AVA+E+  NF+++KGPE+ SKWVGESEKAVR +F KA+  A
Sbjct: 500  PKGFLLYGPPGTGKTLLAKAVANESNANFISIKGPEVLSKWVGESEKAVREIFKKAKQVA 559

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSI+F DEID +A  RG   D   V++R+++QLL  LDG+     V VIAATNRPD IDP
Sbjct: 560  PSIVFLDEIDSIAPRRGASMDS-GVTERIVNQLLTSLDGIEVLNGVVVIAATNRPDIIDP 618

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFD+++Y+ PP+E  R +I ++H + +P + DV++RELA  ++G  GADI  +C
Sbjct: 619  ALLRAGRFDKIMYIPPPDEEGRYKILQVHTKNMPLAPDVDLRELAKKTDGFVGADIENLC 678

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQP----SEIHSYKELSAKFQR 1034
            REA + A   N DA+ +T      A++ ++P    S I  Y +L+    R
Sbjct: 679  REAGMMAYRSNPDATEVTQNDFLNALKTIRPSVDESVIKFYNDLAKSMGR 728



 Score =  226 bits (575), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 187/312 (59%), Gaps = 21/312 (6%)

Query: 731  SGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEA 790
            +G +F   K    K+ +   E  ++++R     EV+ EV +V +ED+GG  +   ++ E 
Sbjct: 145  TGLLFKVVKTIPSKVPVEVSESTQIEIREDPASEVLEEVTRVSYEDIGGLSDQLGRIREI 204

Query: 791  VEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWV 850
            +E P KH E F+R+G  PP G+L+ GPPG  KTL+A+AVA+E+G NF A+ GPE+ SK+ 
Sbjct: 205  IELPLKHPELFERLGITPPKGVLLSGPPGTGKTLIAKAVANESGANFYAINGPEIMSKYY 264

Query: 851  GESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ 910
            G+SE+ +R +F KA  + PSIIF DEID +A  R  E     V  RV++QLL  +DGL +
Sbjct: 265  GQSEQKLREIFQKAEESEPSIIFIDEIDSIAPKR--EDVQGEVERRVVAQLLTLMDGLKE 322

Query: 911  RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIR 970
            R +V VI ATNR D +DPAL RPGRFDR + +G P++  R+EI  IH R +P     + +
Sbjct: 323  RGHVIVIGATNRIDAVDPALRRPGRFDREITIGVPDKKGRKEILAIHTRGMPLGMTDDEK 382

Query: 971  E-----LACLSEGCTGADISLICREAAISAIE--------------ENLDASRITMQHLK 1011
            E     +A L+ G  GAD++ + RE+A++A+               E L+   +T Q   
Sbjct: 383  ENFLEKIADLTYGFVGADLAALTRESAMNALRRYLPEIDLDKPIPTEVLEKMVVTEQDFM 442

Query: 1012 TAIRHVQPSEIH 1023
             A++ ++PS + 
Sbjct: 443  EALKTIEPSSLR 454



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/240 (46%), Positives = 152/240 (63%), Gaps = 19/240 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS +   +++II +          LG+ P KGVLL GPPGTGKT +A+  A++SG N
Sbjct: 191 IGGLSDQLGRIREIIELPLKHPELFERLGITPPKGVLLSGPPGTGKTLIAKAVANESGAN 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            + +NGPE++S+ YG+SEQ L E+F  A +S P+++FIDE+D+IAP R+D   E+ +R+V
Sbjct: 251 FYAINGPEIMSKYYGQSEQKLREIFQKAEESEPSIIFIDEIDSIAPKREDVQGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNR D+++PALRRPGR DREI I               V
Sbjct: 311 AQLLTLMDGLKERGHVIVIGATNRIDAVDPALRRPGRFDREITI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSE----VEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM   + D E    +E ++  T+GFVGADLAAL  E+A+  LRRY
Sbjct: 357 PDKKGRKEILAIHTRGMPLGMTDDEKENFLEKIADLTYGFVGADLAALTRESAMNALRRY 416



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 158/287 (55%), Gaps = 33/287 (11%)

Query: 385 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
           K++   +L    +E  NV+         +GGL    + L++ + +          LG+R 
Sbjct: 446 KTIEPSSLREVTVEVPNVKW------DDIGGLENVKSELREAVELPLLNPDVFKRLGIRA 499

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
            KG LL+GPPGTGKT LA+  A++S  N  ++ GPEV+S+  GESE+A+ E+F  A Q A
Sbjct: 500 PKGFLLYGPPGTGKTLLAKAVANESNANFISIKGPEVLSKWVGESEKAVREIFKKAKQVA 559

Query: 504 PAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           P++VF+DE+D+IAP R    D G  +++R+V  LL  +DG+   +GV+VIAATNRPD I+
Sbjct: 560 PSIVFLDEIDSIAPRRGASMDSG--VTERIVNQLLTSLDGIEVLNGVVVIAATNRPDIID 617

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVE 618
           PAL R GR D+ + I                P P +  R +IL      M  +  D ++ 
Sbjct: 618 PALLRAGRFDKIMYI----------------PPPDEEGRYKILQVHTKNMPLA-PDVDLR 660

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRRYSKIQ--TSSDVLHSTGTL 663
            L+  T GFVGAD+  LC EA ++  R        T +D L++  T+
Sbjct: 661 ELAKKTDGFVGADIENLCREAGMMAYRSNPDATEVTQNDFLNALKTI 707


>gi|391335018|ref|XP_003741894.1| PREDICTED: spermatogenesis-associated protein 5-like [Metaseiulus
            occidentalis]
          Length = 511

 Score =  299 bits (765), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 143/282 (50%), Positives = 194/282 (68%), Gaps = 4/282 (1%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VRP  MR+V+LE+PKV W+D+GG  +VK +  + VEWP  H+EAF+R   +PP+G+LM+G
Sbjct: 229  VRPLEMRDVVLEIPKVNWKDIGGMEDVKKRFRQCVEWPILHKEAFQRFKIKPPSGLLMYG 288

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGCSKT++ARA+A+E+ LNFLAV G ELFSKWVG+SEKAVR LF +AR  AP+++FFDE
Sbjct: 289  PPGCSKTMIARALATESSLNFLAVNGSELFSKWVGDSEKAVRDLFRRARNVAPAVVFFDE 348

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R   S G  V DRV++QLL E+DG+    NV +IAATNRPD ID ALLRPGR 
Sbjct: 349  IDAIATKRNTSSGGSGVGDRVLAQLLTEIDGIEGLENVILIAATNRPDMIDEALLRPGRL 408

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            D ++YV  P+   R EI RI L +   + DV I +L   +EG +GA+I  + +EA + A+
Sbjct: 409  DCVVYVPLPDTDTRREILRIELSERQAAEDVLIDDLVVKTEGYSGAEIVAVVQEAVMKAL 468

Query: 997  EENLDASRITMQHLKTAIRHVQP----SEIHSYKELSAKFQR 1034
            EE+ + S I  +H   A+  V+P      I  Y++    F +
Sbjct: 469  EESFEISAIGKRHFLQALDAVRPRISAESIAFYEQFHKAFNK 510



 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 120/214 (56%), Gaps = 17/214 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K       ++P  G+L++GPPG  KT +AR  A +S +N   VNG E+ S+  G+SE+A+
Sbjct: 270 KEAFQRFKIKPPSGLLMYGPPGCSKTMIARALATESSLNFLAVNGSELFSKWVGDSEKAV 329

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARK--DGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
            ++F  A   APAVVF DE+DAIA  R    GG  +  R++A LL  +DG+   + V++I
Sbjct: 330 RDLFRRARNVAPAVVFFDEIDAIATKRNTSSGGSGVGDRVLAQLLTEIDGIEGLENVILI 389

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNRPD I+ AL RPGRLD  + + +              P    R EIL   LS  + 
Sbjct: 390 AATNRPDMIDEALLRPGRLDCVVYVPL--------------PDTDTRREILRIELSERQA 435

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           +  D  ++ L + T G+ GA++ A+  EA +  L
Sbjct: 436 A-EDVLIDDLVVKTEGYSGAEIVAVVQEAVMKAL 468



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 27/255 (10%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            ++D+GG R  K  L      P++       +G  PP  +L+ GPPG  K+L+ RA A++ 
Sbjct: 3    YDDIGGLRLQKQTLQGLTRIPEEKVRKLLYLGKFPPRRLLLVGPPGTGKSLLVRAAAADL 62

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG--V 891
             L  + V          G++ +  R     A+  + S++  D +D  ++ + KES G  V
Sbjct: 63   SLEIVEVTTENAVKVLGGDAHETSRL----AKKASTSLVLVDNLDAFSSRKDKESQGRLV 118

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            +   R+  Q L             VIA TN+P  +D  L     FDR + +  P+  +R 
Sbjct: 119  AFLKRLPEQTL-------------VIATTNKPSNVDEIL--QALFDREIEITIPSSDERL 163

Query: 952  EIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQ-- 1008
            EI ++ LR +P   +D+ + E+     G TGA+I  + REA  +++    D   I ++  
Sbjct: 164  EILKLSLRDMPHDVTDLELTEVTLSLHGYTGANIETLVREALATSMR---DPGEICIRAG 220

Query: 1009 HLKTAIRHVQPSEIH 1023
            HLK A++ V+P E+ 
Sbjct: 221  HLKQAVKVVRPLEMR 235



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 115/234 (49%), Gaps = 30/234 (12%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   L+ +  I       L  LG  P + +LL GPPGTGK+ L R  A D  + 
Sbjct: 6   IGGLRLQKQTLQGLTRIPEEKVRKLLYLGKFPPRRLLLVGPPGTGKSLLVRAAAADLSLE 65

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           +  V     V    G++    HE    A +++ ++V +D LDA + +RKD  +E   R+V
Sbjct: 66  IVEVTTENAVKVLGGDA----HETSRLAKKASTSLVLVDNLDAFS-SRKD--KESQGRLV 118

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A L  L       +  LVIA TN+P +++  L+     DREIEI               +
Sbjct: 119 AFLKRL------PEQTLVIATTNKPSNVDEILQ--ALFDREIEI--------------TI 156

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           PS  +RLEIL   L  M H + D E+  ++++ HG+ GA++  L  EA    +R
Sbjct: 157 PSSDERLEILKLSLRDMPHDVTDLELTEVTLSLHGYTGANIETLVREALATSMR 210


>gi|406602293|emb|CCH46131.1| VCP-like ATPase [Wickerhamomyces ciferrii]
          Length = 785

 Score =  298 bits (764), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 139/286 (48%), Positives = 203/286 (70%), Gaps = 1/286 (0%)

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
            G+  S     L + L D E A  ++RPSAMRE++LE+PKV W D+GGQ ++K +L E ++
Sbjct: 477  GLKSSTPHSQLLVTLDDVETALPEIRPSAMREILLEMPKVYWSDIGGQEDLKIKLREMIQ 536

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P +  E FK++G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGE
Sbjct: 537  LPLEASETFKKLGVSSPKGVLLYGPPGCSKTLTAKALATESGVNFLAVKGPEIFNKYVGE 596

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+A+R +F KARA APSIIFFDEID L+  R +     S    V++ LL E+DG+ +  
Sbjct: 597  SERAIREIFRKARAAAPSIIFFDEIDALSPDRSEGGPTTSAGSHVLTSLLNEIDGVEELN 656

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS-DVNIRE 971
             V ++AATNRPD+IDPALLRPGR DR +YV PP+   R +I +    K+  S  DVN+ E
Sbjct: 657  GVVIVAATNRPDEIDPALLRPGRLDRHIYVSPPDFEARLQILKNSTTKMSLSKEDVNLEE 716

Query: 972  LACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 1017
            +A  ++GC+GA++ L+C+EA ++A+ EN  A ++  +H + A++ +
Sbjct: 717  IAEKTDGCSGAEVVLLCQEAGLAAVMENQTAEKVEKRHFEKALKSI 762



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 155/245 (63%), Gaps = 17/245 (6%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGLS++  +LK  I     + TL S  G+ P +G+LLHGPPGTGKT L R  A ++ 
Sbjct: 252 SSVGGLSRQIELLKASIELPLHQPTLFSDFGITPPRGILLHGPPGTGKTMLLRAVAAETN 311

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQ 528
            ++ T+NGP +VS+  GE+E AL ++F+ A +  P+++FIDE+D++AP+R  D   E+  
Sbjct: 312 AHVLTINGPSIVSKYLGETESALRDIFNEARRYQPSIIFIDEIDSLAPSRSSDDSGEVES 371

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+VATLL LMDGV  +  ++V+AATNRP+S++ ALRRPGR D+E+EI             
Sbjct: 372 RVVATLLTLMDGVGDSGRLVVVAATNRPNSVDSALRRPGRFDQEVEI------------- 418

Query: 589 AAVPSPAQRLEILHALLSGME-HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
             +P    R +IL      M+ H+L + +V  L+  THG+VGADL ALC E  +  +RR 
Sbjct: 419 -GIPDVEARDQILKLQFEKMKRHNLSEQDVFNLASRTHGYVGADLVALCRECVMKTIRRG 477

Query: 648 SKIQT 652
            K  T
Sbjct: 478 LKSST 482



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 164/310 (52%), Gaps = 24/310 (7%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG       L  ++E P      F   G  PP GIL+ GPPG  KT++ RAVA+E 
Sbjct: 251  YSSVGGLSRQIELLKASIELPLHQPTLFSDFGITPPRGILLHGPPGTGKTMLLRAVAAET 310

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID LA  R  +  G  V
Sbjct: 311  NAHVLTINGPSIVSKYLGETESALRDIFNEARRYQPSIIFIDEIDSLAPSRSSDDSG-EV 369

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     + V+AATNRP+ +D AL RPGRFD+ + +G P+   R++I
Sbjct: 370  ESRVVATLLTLMDGVGDSGRLVVVAATNRPNSVDSALRRPGRFDQEVEIGIPDVEARDQI 429

Query: 954  FRIHLRKIPCS--SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR------I 1005
             ++   K+     S+ ++  LA  + G  GAD+  +CRE  +  I   L +S       +
Sbjct: 430  LKLQFEKMKRHNLSEQDVFNLASRTHGYVGADLVALCRECVMKTIRRGLKSSTPHSQLLV 489

Query: 1006 TMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESGYQLR 1050
            T+  ++TA+  ++P               S+I   ++L  K + ++    EA E+  +L 
Sbjct: 490  TLDDVETALPEIRPSAMREILLEMPKVYWSDIGGQEDLKIKLREMIQLPLEASETFKKLG 549

Query: 1051 PSKSIGSNMW 1060
             S   G  ++
Sbjct: 550  VSSPKGVLLY 559



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 137/237 (57%), Gaps = 17/237 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG       L+++I +      T   LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 519 SDIGGQEDLKIKLREMIQLPLEASETFKKLGVSSPKGVLLYGPPGCSKTLTAKALATESG 578

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS-- 527
           VN   V GPE+ ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R +GG   S  
Sbjct: 579 VNFLAVKGPEIFNKYVGESERAIREIFRKARAAAPSIIFFDEIDALSPDRSEGGPTTSAG 638

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
             ++ +LLN +DGV   +GV+++AATNRPD I+PAL RPGRLDR I +           S
Sbjct: 639 SHVLTSLLNEIDGVEELNGVVIVAATNRPDEIDPALLRPGRLDRHIYV-----------S 687

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           P   P    RL+IL    + M  S  D  +E ++  T G  GA++  LC EA L  +
Sbjct: 688 P---PDFEARLQILKNSTTKMSLSKEDVNLEEIAEKTDGCSGAEVVLLCQEAGLAAV 741


>gi|410075153|ref|XP_003955159.1| hypothetical protein KAFR_0A05890 [Kazachstania africana CBS 2517]
 gi|372461741|emb|CCF56024.1| hypothetical protein KAFR_0A05890 [Kazachstania africana CBS 2517]
          Length = 772

 Score =  298 bits (764), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 139/276 (50%), Positives = 197/276 (71%), Gaps = 3/276 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + D E A + +RPSAMRE+ LE+PKV W D+GGQ E+K ++ E ++ P +  E F 
Sbjct: 476  LKVTMDDVENAMLDIRPSAMREIFLEMPKVYWSDIGGQHELKRKMKEMIQLPLEASETFA 535

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G   P G+L++GPPGCSKTL A+A+A+E+G+NF AVKGPE+FSK+VGESE+A+R +F 
Sbjct: 536  ELGVSAPKGVLLYGPPGCSKTLTAKALATESGINFFAVKGPEIFSKYVGESERAIREIFR 595

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID L+  R  +S   S +  V++ LL E+DG+ +   V ++AATNR
Sbjct: 596  KARAASPSIIFFDEIDALSPDR--DSGSTSAASHVLTSLLNEIDGVEELKGVVIVAATNR 653

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCTG 981
            PD+IDPALLRPGR DR ++VGPP+   R +I     +K     SDVN+ +LA  ++GC+G
Sbjct: 654  PDEIDPALLRPGRLDRHIFVGPPDYEARLQILHKCTKKFQLEGSDVNLEDLARRTDGCSG 713

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHV 1017
            A+I L+C+EA ++AI ENL A  +   H + A+  +
Sbjct: 714  AEIVLLCQEAGLAAIMENLQAKEVRAAHFEKAMEGI 749



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 107/239 (44%), Positives = 154/239 (64%), Gaps = 19/239 (7%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLSKE  +LK  I     + TL S  G+ P +G+LLHGPPGTGKT L R  A+ S  +
Sbjct: 239 VGGLSKEIGLLKSTIELPLHQPTLFSDFGVSPPRGILLHGPPGTGKTMLLRCVANTSNAH 298

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
           + T+NGP +VS+  GE+E AL ++F+ A +  P+++FIDE+D++AP R  D   E+  R+
Sbjct: 299 VLTINGPSIVSKYLGETEAALRDIFNEAKKYQPSIIFIDEIDSLAPNRANDDSGEVESRV 358

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           VATLL LMDG+     ++V+AATNRP+S++PALRRPGR D+E+EI               
Sbjct: 359 VATLLTLMDGMGAAGRLVVVAATNRPNSVDPALRRPGRFDQEVEI--------------G 404

Query: 591 VPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +P    RL+IL    S M    HSL +  ++ ++  THG+VGADL+ALC E+ +  ++R
Sbjct: 405 IPDAEARLDILLKQFSNMSSERHSLTEDNIKTIASKTHGYVGADLSALCRESVMKTIQR 463



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 162/314 (51%), Gaps = 28/314 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +E VGG  +    L   +E P      F   G  PP GIL+ GPPG  KT++ R VA+ +
Sbjct: 236  YEAVGGLSKEIGLLKSTIELPLHQPTLFSDFGVSPPRGILLHGPPGTGKTMLLRCVANTS 295

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E A+R +F +A+   PSIIF DEID LA  R  +  G  V
Sbjct: 296  NAHVLTINGPSIVSKYLGETEAALRDIFNEAKKYQPSIIFIDEIDSLAPNRANDDSG-EV 354

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     + V+AATNRP+ +DPAL RPGRFD+ + +G P+   R +I
Sbjct: 355  ESRVVATLLTLMDGMGAAGRLVVVAATNRPNSVDPALRRPGRFDQEVEIGIPDAEARLDI 414

Query: 954  FRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS------ 1003
                   +       ++ NI+ +A  + G  GAD+S +CRE+ +  I+  L         
Sbjct: 415  LLKQFSNMSSERHSLTEDNIKTIASKTHGYVGADLSALCRESVMKTIQRGLTEGTAMDKT 474

Query: 1004 --RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 1046
              ++TM  ++ A+  ++P               S+I    EL  K + ++    EA E+ 
Sbjct: 475  LLKVTMDDVENAMLDIRPSAMREIFLEMPKVYWSDIGGQHELKRKMKEMIQLPLEASETF 534

Query: 1047 YQLRPSKSIGSNMW 1060
             +L  S   G  ++
Sbjct: 535  AELGVSAPKGVLLY 548



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 151/273 (55%), Gaps = 24/273 (8%)

Query: 382 AVSKSLREGTLPNAQIEFQNVQATVEQDI---------SKLGGLSKEYAILKDII-ISSS 431
           A+ K+L + T+ + +    +++ +  ++I         S +GG  +    +K++I +   
Sbjct: 470 AMDKTLLKVTMDDVENAMLDIRPSAMREIFLEMPKVYWSDIGGQHELKRKMKEMIQLPLE 529

Query: 432 VKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQA 491
              T + LG+   KGVLL+GPPG  KT  A+  A +SG+N F V GPE+ S+  GESE+A
Sbjct: 530 ASETFAELGVSAPKGVLLYGPPGCSKTLTAKALATESGINFFAVKGPEIFSKYVGESERA 589

Query: 492 LHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           + E+F  A  ++P+++F DE+DA++P R  G    +  ++ +LLN +DGV    GV+++A
Sbjct: 590 IREIFRKARAASPSIIFFDEIDALSPDRDSGSTSAASHVLTSLLNEIDGVEELKGVVIVA 649

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLDR I +                P    RL+ILH      +  
Sbjct: 650 ATNRPDEIDPALLRPGRLDRHIFV--------------GPPDYEARLQILHKCTKKFQLE 695

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             D  +E L+  T G  GA++  LC EA L  +
Sbjct: 696 GSDVNLEDLARRTDGCSGAEIVLLCQEAGLAAI 728


>gi|366997420|ref|XP_003678472.1| hypothetical protein NCAS_0J01550 [Naumovozyma castellii CBS 4309]
 gi|342304344|emb|CCC72134.1| hypothetical protein NCAS_0J01550 [Naumovozyma castellii CBS 4309]
          Length = 772

 Score =  298 bits (764), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 140/294 (47%), Positives = 209/294 (71%), Gaps = 6/294 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++ + D E A + +RPSAMRE+ LE+PKV W D+GGQ E+K ++ E ++ P +  E F 
Sbjct: 475  LQVTMNDVENAMIDIRPSAMREIFLEMPKVYWSDIGGQEELKRKMKEMIQLPLEASETFA 534

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F 
Sbjct: 535  RLGVTAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFR 594

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID L+  R   S   S +  V++ LL E+DG+ +   V ++AATNR
Sbjct: 595  KARAASPSIIFFDEIDALSPDRDGGS-SSSAASHVLTSLLNEIDGVEELNGVVIVAATNR 653

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTG 981
            PD+IDPALLRPGR DR +YV PP+   R +I R   +K     S +N+ +L+  ++GC+G
Sbjct: 654  PDEIDPALLRPGRLDRHIYVAPPDYEARLQILRKCTKKFQIDESTINLEDLSRRTDGCSG 713

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            A++ L+C+EA ++AI E+LDAS++   H + A+    R + P  +  Y++ +++
Sbjct: 714  AEVVLLCQEAGLAAIMEDLDASKVEASHFERALQGISRGITPEMLAYYQDFASR 767



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/239 (44%), Positives = 154/239 (64%), Gaps = 19/239 (7%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE  +LK  I     + TL S  G+ P +G+LLHGPPGTGKT L R  A+ +  +
Sbjct: 238 VGGLHKEVDLLKTTISLPLHQPTLFSDFGVSPPRGILLHGPPGTGKTMLLRCVANTANAH 297

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
           + T+NGP +VS+  GE+E AL ++F+ A +  P+++FIDE+D+IAP R  D   E+  R+
Sbjct: 298 VLTINGPSIVSKYLGETESALRDIFNEAKKYQPSIIFIDEIDSIAPNRANDDSGEVESRV 357

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           VATLL LMDG+     ++VIAATNRP+S++PALRRPGR D+E+EI               
Sbjct: 358 VATLLTLMDGMGSAGRLVVIAATNRPNSVDPALRRPGRFDQEVEI--------------G 403

Query: 591 VPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +P    RL+IL    S M    H+L + +++ +S  THG+VGADL++LC E+ +  ++R
Sbjct: 404 IPDVDARLDILMKQFSQMSSERHTLTEEDIKTISSKTHGYVGADLSSLCRESVMKTIQR 462



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 162/303 (53%), Gaps = 28/303 (9%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            ++ VGG  +    L   +  P      F   G  PP GIL+ GPPG  KT++ R VA+ A
Sbjct: 235  YDSVGGLHKEVDLLKTTISLPLHQPTLFSDFGVSPPRGILLHGPPGTGKTMLLRCVANTA 294

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E A+R +F +A+   PSIIF DEID +A  R  +  G  V
Sbjct: 295  NAHVLTINGPSIVSKYLGETESALRDIFNEAKKYQPSIIFIDEIDSIAPNRANDDSG-EV 353

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     + VIAATNRP+ +DPAL RPGRFD+ + +G P+   R +I
Sbjct: 354  ESRVVATLLTLMDGMGSAGRLVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARLDI 413

Query: 954  FRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR----- 1004
                  ++       ++ +I+ ++  + G  GAD+S +CRE+ +  I+  L++S+     
Sbjct: 414  LMKQFSQMSSERHTLTEEDIKTISSKTHGYVGADLSSLCRESVMKTIQRGLNSSKTIDSS 473

Query: 1005 ---ITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 1046
               +TM  ++ A+  ++P               S+I   +EL  K + ++    EA E+ 
Sbjct: 474  VLQVTMNDVENAMIDIRPSAMREIFLEMPKVYWSDIGGQEELKRKMKEMIQLPLEASETF 533

Query: 1047 YQL 1049
             +L
Sbjct: 534  ARL 536



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 132/236 (55%), Gaps = 16/236 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 507 SDIGGQEELKRKMKEMIQLPLEASETFARLGVTAPKGVLLYGPPGCSKTLTAKALATESG 566

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE+ ++  GESE+A+ E+F  A  ++P+++F DE+DA++P R  G    +  
Sbjct: 567 INFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDALSPDRDGGSSSSAAS 626

Query: 530 MVAT-LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            V T LLN +DGV   +GV+++AATNRPD I+PAL RPGRLDR I +             
Sbjct: 627 HVLTSLLNEIDGVEELNGVVIVAATNRPDEIDPALLRPGRLDRHIYV------------- 673

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            A P    RL+IL       +       +E LS  T G  GA++  LC EA L  +
Sbjct: 674 -APPDYEARLQILRKCTKKFQIDESTINLEDLSRRTDGCSGAEVVLLCQEAGLAAI 728


>gi|401840057|gb|EJT42979.1| AFG2-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 777

 Score =  298 bits (764), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 143/297 (48%), Positives = 210/297 (70%), Gaps = 11/297 (3%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P +  E F
Sbjct: 480  SLIVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQDELKTKMKEMIQLPLEASETF 539

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NF AVKGPE+F+K+VGESE+A+R +F
Sbjct: 540  ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFFAVKGPEVFNKYVGESERAIREIF 599

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVS--DRVMSQLLVELDGLHQRVNVTVIAA 919
             KAR+ APSIIFFDEID L+ +R    DG S S  + V++ LL E+DG+ +   V ++AA
Sbjct: 600  RKARSAAPSIIFFDEIDALSPVR----DGGSTSAVNHVLTSLLNEIDGVEELKGVVIVAA 655

Query: 920  TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEG 978
            TNRPD+ID ALLRPGR DR +YVGPP+   R EI +   +K     S V+++ELA  ++G
Sbjct: 656  TNRPDEIDGALLRPGRLDRHIYVGPPDANARLEILKKCTKKFNTEGSGVDLQELAARTKG 715

Query: 979  CTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
             +GA++ L+C+EA ++AI E+LD +++  +H + A     R + P  +  Y+E + +
Sbjct: 716  YSGAEVVLLCQEAGLAAIMEDLDVTKVEFRHFEKAFKGIARGITPEMLLYYEEFALR 772



 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 185/312 (59%), Gaps = 35/312 (11%)

Query: 347 TNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEF-QNVQAT 405
           T++ S P V++ +D  S+    +   + YL PP        R+G+     I F + +QA+
Sbjct: 180 TSDGSLPDVSQ-LDLNSDEVYGSSNGQYYLSPPF-----IFRKGS---THIAFTKEMQAS 230

Query: 406 VEQDI------SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
            + ++      + +GGL+KE   LK  I I     +  SS G+ P +G+LLHGPPGTGKT
Sbjct: 231 RKYNLPEPISYAAVGGLNKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKT 290

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            L R+ A+ S  ++ T+NGP +VS+  GE+E AL E+F+ A +  P+++FIDE+D+IAP 
Sbjct: 291 MLLRVVANTSNAHVLTINGPSIVSKYLGETESALREIFNEARKYQPSIIFIDEIDSIAPN 350

Query: 519 R-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
           R  D   E+  R+VATLL LMDG+     ++VIAATNRP+ ++PALRRPGR D+E+EI  
Sbjct: 351 RANDDSGEVESRVVATLLTLMDGMGAAGRLIVIAATNRPNCVDPALRRPGRFDQEVEI-- 408

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAA 634
                        +P    R +IL    S M    H+L   E+++++  THG+VGADL A
Sbjct: 409 ------------GIPDVDARFDILTRQFSKMSPDRHALNLEEIKHIASKTHGYVGADLTA 456

Query: 635 LCNEAALVCLRR 646
           LC E+ +  ++R
Sbjct: 457 LCRESVMKTIQR 468



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 167/316 (52%), Gaps = 28/316 (8%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +  VGG  +    L  A+E P      F   G  PP GIL+ GPPG  KT++ R VA+
Sbjct: 239  ISYAAVGGLNKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 298

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
             +  + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID +A  R  +  G 
Sbjct: 299  TSNAHVLTINGPSIVSKYLGETESALREIFNEARKYQPSIIFIDEIDSIAPNRANDDSG- 357

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++ LL  +DG+     + VIAATNRP+ +DPAL RPGRFD+ + +G P+   R 
Sbjct: 358  EVESRVVATLLTLMDGMGAAGRLIVIAATNRPNCVDPALRRPGRFDQEVEIGIPDVDARF 417

Query: 952  EIFRIHLRKI-PCSSDVN---IRELACLSEGCTGADISLICREAAISAIEENL----DAS 1003
            +I      K+ P    +N   I+ +A  + G  GAD++ +CRE+ +  I+  L    D  
Sbjct: 418  DILTRQFSKMSPDRHALNLEEIKHIASKTHGYVGADLTALCRESVMKTIQRGLGLDADID 477

Query: 1004 R----ITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADE 1044
            +    +T++ +++A+  ++P               S+I    EL  K + ++    EA E
Sbjct: 478  KFSLIVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQDELKTKMKEMIQLPLEASE 537

Query: 1045 SGYQLRPSKSIGSNMW 1060
            +  +L  S   G  ++
Sbjct: 538  TFARLGISAPKGVLLY 553



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/235 (38%), Positives = 131/235 (55%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 513 SDIGGQDELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 572

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N F V GPEV ++  GESE+A+ E+F  A  +AP+++F DE+DA++P R  G       
Sbjct: 573 INFFAVKGPEVFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPVRDGGSTSAVNH 632

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV    GV+++AATNRPD I+ AL RPGRLDR I +              
Sbjct: 633 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDGALLRPGRLDRHIYV-------------- 678

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RLEIL              +++ L+  T G+ GA++  LC EA L  +
Sbjct: 679 GPPDANARLEILKKCTKKFNTEGSGVDLQELAARTKGYSGAEVVLLCQEAGLAAI 733


>gi|406696343|gb|EKC99634.1| peroxisome biosynthesis protein PAS1 (Peroxin-1) [Trichosporon asahii
            var. asahii CBS 8904]
          Length = 1502

 Score =  298 bits (764), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 142/301 (47%), Positives = 206/301 (68%), Gaps = 12/301 (3%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            +L   D +     +RPSAMREV +E P V+W D+GGQ EVK +L E VEWP  H + F R
Sbjct: 460  QLTYADMQATLPTIRPSAMREVFVETPTVRWSDIGGQAEVKQKLRECVEWPLTHADTFAR 519

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G   P G+L++GPPGCSKT+ A+A+A+E+G+NF+AVKGPEL +K+VGESE+AVR +F K
Sbjct: 520  LGVDAPRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAVREIFRK 579

Query: 864  ARANAPSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            ARA +PSI+FFDEID L A R  G+   G      V++ LL E+DG+     VTV+AATN
Sbjct: 580  ARAASPSIVFFDEIDALGAARDIGEGHGG------VLTSLLNEMDGIEALSGVTVVAATN 633

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD +D AL RPGR DR+LYVG P+   R+EIF++ ++ +    +V++ ELA ++EGC+G
Sbjct: 634  RPDVLDAALTRPGRLDRILYVGAPDLLTRQEIFKLRMKSMAVDPEVDVAELARITEGCSG 693

Query: 982  ADISLICREAAISAIEENLDASRITMQHL----KTAIRHVQPSEIHSYKELSAKFQRLVH 1037
            A+++ IC++AA++ + E+L+A  +  +HL    +T  R + P  I  ++    +   L+H
Sbjct: 694  AEVASICQDAALATMNEDLNAPFVKKEHLLNSARTVRRRITPEMIEFFEHWRDQSVSLLH 753

Query: 1038 S 1038
             
Sbjct: 754  G 754



 Score =  189 bits (479), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 153/242 (63%), Gaps = 21/242 (8%)

Query: 412 KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLAR-LCAHDSG 469
           +LGGL  +   +K ++ +        +  GL P +G+LLHGPPGTGKT+LAR + A   G
Sbjct: 224 QLGGLEPQIKQVKALLDLPLRNPEVFTQFGLTPPRGLLLHGPPGTGKTALARAIAASTPG 283

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE--ELS 527
            +   VNGPE+ S  +GE+E+ L  +F+ A + +P ++ +DE+DA+ P R+DGGE  E+ 
Sbjct: 284 CSCIVVNGPELSSAFHGETEERLRSIFEEARKRSPCIIVLDEVDALCP-RRDGGEGGEVE 342

Query: 528 QRMVATLLNLMDGVCR--TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +R+VA LL LMDG+     + V+V+AATNRP+SI+PALRRPGR DREIEI          
Sbjct: 343 RRVVAMLLTLMDGMTSDAKEHVVVVAATNRPNSIDPALRRPGRFDREIEI---------- 392

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                +P  A R +IL  +LS M ++L   E+  ++  THG+VGADL +L  E+A   ++
Sbjct: 393 ----GIPDAAGRRQILDIMLSKMPNALSAEEIASIAARTHGYVGADLGSLVRESASAAIQ 448

Query: 646 RY 647
           R+
Sbjct: 449 RW 450



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/255 (38%), Positives = 148/255 (58%), Gaps = 10/255 (3%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA-SEAGL 835
            +GG      Q+   ++ P ++ E F + G  PP G+L+ GPPG  KT +ARA+A S  G 
Sbjct: 225  LGGLEPQIKQVKALLDLPLRNPEVFTQFGLTPPRGLLLHGPPGTGKTALARAIAASTPGC 284

Query: 836  NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 895
            + + V GPEL S + GE+E+ +RS+F +AR  +P II  DE+D L   R    +G  V  
Sbjct: 285  SCIVVNGPELSSAFHGETEERLRSIFEEARKRSPCIIVLDEVDALCP-RRDGGEGGEVER 343

Query: 896  RVMSQLLVELDGL--HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
            RV++ LL  +DG+    + +V V+AATNRP+ IDPAL RPGRFDR + +G P+   R +I
Sbjct: 344  RVVAMLLTLMDGMTSDAKEHVVVVAATNRPNSIDPALRRPGRFDREIEIGIPDAAGRRQI 403

Query: 954  FRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS-----RITM 1007
              I L K+P + S   I  +A  + G  GAD+  + RE+A +AI+    A      ++T 
Sbjct: 404  LDIMLSKMPNALSAEEIASIAARTHGYVGADLGSLVRESASAAIQRWHTAGGEGSPQLTY 463

Query: 1008 QHLKTAIRHVQPSEI 1022
              ++  +  ++PS +
Sbjct: 464  ADMQATLPTIRPSAM 478



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 123/212 (58%), Gaps = 21/212 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T + LG+   +GVLL+GPPG  KT  A+  A +SG+N   V GPE++++  GESE+A+ E
Sbjct: 516 TFARLGVDAPRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAVRE 575

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F  A  ++P++VF DE+DA+  AR  G  E    ++ +LLN MDG+    GV V+AATN
Sbjct: 576 IFRKARAASPSIVFFDEIDALGAARDIG--EGHGGVLTSLLNEMDGIEALSGVTVVAATN 633

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD ++ AL RPGRLDR + +                P    R EI    +  M    +D
Sbjct: 634 RPDVLDAALTRPGRLDRILYV--------------GAPDLLTRQEIFKLRMKSMA---VD 676

Query: 615 SEVEYLSMA--THGFVGADLAALCNEAALVCL 644
            EV+   +A  T G  GA++A++C +AAL  +
Sbjct: 677 PEVDVAELARITEGCSGAEVASICQDAALATM 708


>gi|268323248|emb|CBH36836.1| conserved hypothetical protein, AAA ATPase family and CDC48 family
            [uncultured archaeon]
          Length = 739

 Score =  298 bits (764), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 152/320 (47%), Positives = 216/320 (67%), Gaps = 19/320 (5%)

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
            M EK   L++ + DF +A     PSA+REV +EVP VKWED+GG    K +L E VEWP 
Sbjct: 424  MVEK---LEVTMDDFNEALKNTEPSALREVFVEVPNVKWEDIGGLERAKQELKEVVEWPL 480

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            K+ + F  + T+PP G+L+FGPPG  KT++ +AVA+E+  NF+++KGPEL SKWVGESEK
Sbjct: 481  KYPDVFSLLNTKPPKGVLLFGPPGTGKTMLVKAVANESDANFISIKGPELLSKWVGESEK 540

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
            AVR +F KA+ +AP IIF DEID +A IR    D   V++RV+SQ+L E+DGL +  +V 
Sbjct: 541  AVREIFRKAKQSAPCIIFLDEIDSIAPIRSAGLDS-HVTERVVSQILTEMDGLEELKDVM 599

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL 975
            +IAATNRPD IDPALLRPGR DRL+Y+  P +  RE IF++HL   P  +DV+I ELA +
Sbjct: 600  IIAATNRPDIIDPALLRPGRLDRLIYIQSPTKEAREAIFKVHLAGKPLGADVSIEELAKM 659

Query: 976  SEGCTGADISLICREAAISAI---------EEN----LDASRITMQHLKTAIRHVQP-SE 1021
            +EG  GADI+ I +EA ++A+         EEN    ++   +  +H ++AI+ ++P + 
Sbjct: 660  TEGYVGADIAGIVKEAVMAALREFVTLEITEENIKDIMENIIVMKKHFESAIKSMRPTTT 719

Query: 1022 IHSYKELSAKFQRLV-HSNA 1040
            + + +E   + + LV H+ A
Sbjct: 720  VKAQQEFEERAEDLVRHAYA 739



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 117/272 (43%), Positives = 171/272 (62%), Gaps = 16/272 (5%)

Query: 763  REVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            RE  + VP+V +ED+GG +     + E +E P +H E F+R+G  PP G+L+ GPPG  K
Sbjct: 176  REEKIGVPRVAYEDIGGLKREIGLIREMIELPLRHPELFERLGIEPPKGVLLQGPPGTGK 235

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL+A+AVA+E   NF ++ GPE+ SK+ GESE+ +R +F  A  +APSIIF DE+D +A 
Sbjct: 236  TLIAKAVANETDANFYSISGPEIMSKFYGESERHLRQIFEDAEKSAPSIIFIDELDSIAP 295

Query: 883  IRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
             RG E+ G  V  RV++QLL  +DG   R  V VI ATNRP+ +D AL R GRFDR L +
Sbjct: 296  KRG-ETTG-EVERRVVAQLLSLMDGQESRGQVVVIGATNRPNALDEALRRGGRFDRELEI 353

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----- 997
            G P+   R+EI ++H R +P + DVN++E+A  + G  GADI+ +C+EAA+ A+      
Sbjct: 354  GIPDRNGRDEILQVHTRGMPLAEDVNLKEIANFTHGFVGADIATLCKEAAMHALRKILPE 413

Query: 998  ---------ENLDASRITMQHLKTAIRHVQPS 1020
                     E ++   +TM     A+++ +PS
Sbjct: 414  IDLEQEIPPEMVEKLEVTMDDFNEALKNTEPS 445



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/270 (41%), Positives = 165/270 (61%), Gaps = 20/270 (7%)

Query: 379 PLNAVSKSLREGTL-PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTL 436
           PL  V  ++  G L   A+ E   V     +DI   GGL +E  +++++I +        
Sbjct: 158 PLGTVIPNIETGILLRKAREEKIGVPRVAYEDI---GGLKREIGLIREMIELPLRHPELF 214

Query: 437 SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
             LG+ P KGVLL GPPGTGKT +A+  A+++  N ++++GPE++S+ YGESE+ L ++F
Sbjct: 215 ERLGIEPPKGVLLQGPPGTGKTLIAKAVANETDANFYSISGPEIMSKFYGESERHLRQIF 274

Query: 497 DSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           + A +SAP+++FIDELD+IAP R +   E+ +R+VA LL+LMDG      V+VI ATNRP
Sbjct: 275 EDAEKSAPSIIFIDELDSIAPKRGETTGEVERRVVAQLLSLMDGQESRGQVVVIGATNRP 334

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           ++++ ALRR GR DRE+EI               +P    R EIL     GM  +  D  
Sbjct: 335 NALDEALRRGGRFDRELEI--------------GIPDRNGRDEILQVHTRGMPLA-EDVN 379

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++ ++  THGFVGAD+A LC EAA+  LR+
Sbjct: 380 LKEIANFTHGFVGADIATLCKEAAMHALRK 409



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 142/245 (57%), Gaps = 17/245 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    LK+++          S L  +P KGVLL GPPGTGKT L +  A++S  N
Sbjct: 462 IGGLERAKQELKEVVEWPLKYPDVFSLLNTKPPKGVLLFGPPGTGKTMLVKAVANESDAN 521

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRM 530
             ++ GPE++S+  GESE+A+ E+F  A QSAP ++F+DE+D+IAP R  G    +++R+
Sbjct: 522 FISIKGPELLSKWVGESEKAVREIFRKAKQSAPCIIFLDEIDSIAPIRSAGLDSHVTERV 581

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ +L  MDG+     V++IAATNRPD I+PAL RPGRLDR I I               
Sbjct: 582 VSQILTEMDGLEELKDVMIIAATNRPDIIDPALLRPGRLDRLIYIQS------------- 628

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
            P+   R  I    L+G      D  +E L+  T G+VGAD+A +  EA +  LR +  +
Sbjct: 629 -PTKEAREAIFKVHLAGKPLG-ADVSIEELAKMTEGYVGADIAGIVKEAVMAALREFVTL 686

Query: 651 QTSSD 655
           + + +
Sbjct: 687 EITEE 691


>gi|330835721|ref|YP_004410449.1| AAA family ATPase [Metallosphaera cuprina Ar-4]
 gi|329567860|gb|AEB95965.1| AAA family ATPase, CDC48 subfamily protein [Metallosphaera cuprina
            Ar-4]
          Length = 768

 Score =  298 bits (764), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 134/258 (51%), Positives = 195/258 (75%), Gaps = 1/258 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++++ DF  A  ++ PS MRE+ +EVP+VKW+D+GG  ++K +L E  E+P K  + ++
Sbjct: 432  MEVKMEDFMNAFKEIVPSGMREIYIEVPEVKWDDIGGLGDIKEELREVAEYPLKFPDYYE 491

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESE+A+R +F 
Sbjct: 492  TAGVEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESERAIREIFR 551

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  APS+IFFDEID +A +RG  SD   V++R+++QLL E+DG+    NV ++AATNR
Sbjct: 552  KARMYAPSVIFFDEIDAVAPMRGISSDS-GVTERLVNQLLAEMDGIENLDNVVIVAATNR 610

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRF++L+YV PP++  R +I R+H +K+  S +VN+ ELA  +EG TGA
Sbjct: 611  PDILDPALLRPGRFEKLVYVPPPDKNARYDILRVHTKKVALSDEVNLEELAERTEGYTGA 670

Query: 983  DISLICREAAISAIEENL 1000
            D++ + REAA+ AI E +
Sbjct: 671  DLAALVREAAMRAIREGM 688



 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 120/266 (45%), Positives = 171/266 (64%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V +ED+GG + V  ++ E VE P +H E FKR+G  PP GI+++GPPG  KTL+A+AV
Sbjct: 186  PRVTYEDIGGMKNVIQKIRELVELPLRHPELFKRLGIEPPKGIMLYGPPGVGKTLLAKAV 245

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DE+D +A  R  E+ 
Sbjct: 246  ANETESYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFIDEVDAIAPKR-DEAI 304

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R NV VIAATNRP+ +DPAL RPGRFDR + +  P++  
Sbjct: 305  G-EVERRVVAQLLTLMDGLENRGNVIVIAATNRPNAVDPALRRPGRFDREIEIPLPDKQG 363

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R EI +IH R +P S DV + +LA +S G TGAD+S + REAA++A+             
Sbjct: 364  RLEILQIHTRNMPLSKDVELEKLADISHGYTGADLSALVREAAMNALRRYLPMIDISQDK 423

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L+   + M+    A + + PS
Sbjct: 424  IPPEILEKMEVKMEDFMNAFKEIVPS 449



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 140/212 (66%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG++L+GPPG GKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 217 FKRLGIEPPKGIMLYGPPGVGKTLLAKAVANETESYFTSINGPEIMSKFYGESEQRLREI 276

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++FIDE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 277 FEDAKKHAPAIIFIDEVDAIAPKRDEAIGEVERRVVAQLLTLMDGLENRGNVIVIAATNR 336

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREIEI +              P    RLEIL      M  S  D 
Sbjct: 337 PNAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLS-KDV 381

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           E+E L+  +HG+ GADL+AL  EAA+  LRRY
Sbjct: 382 ELEKLADISHGYTGADLSALVREAAMNALRRY 413



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 162/308 (52%), Gaps = 47/308 (15%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           D++ ++  P++ E M+ +   F             +NA  + +  G +    IE   V+ 
Sbjct: 418 DISQDKIPPEILEKMEVKMEDF-------------MNAFKEIVPSG-MREIYIEVPEVKW 463

Query: 405 TVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
               DI  LG + +E   + +  +         + G+ P KG+LL GPPGTGKT LA+  
Sbjct: 464 ---DDIGGLGDIKEELREVAEYPLK--FPDYYETAGVEPPKGILLFGPPGTGKTMLAKAV 518

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KD 521
           A +SG N   V GPEV+S+  GESE+A+ E+F  A   AP+V+F DE+DA+AP R    D
Sbjct: 519 ATESGANFIAVRGPEVLSKWVGESERAIREIFRKARMYAPSVIFFDEIDAVAPMRGISSD 578

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
            G  +++R+V  LL  MDG+   D V+++AATNRPD ++PAL RPGR ++ +        
Sbjct: 579 SG--VTERLVNQLLAEMDGIENLDNVVIVAATNRPDILDPALLRPGRFEKLV-------- 628

Query: 582 SLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEV--EYLSMATHGFVGADLAALCN 637
                    VP P +  R +IL       +   L  EV  E L+  T G+ GADLAAL  
Sbjct: 629 --------YVPPPDKNARYDILRV---HTKKVALSDEVNLEELAERTEGYTGADLAALVR 677

Query: 638 EAALVCLR 645
           EAA+  +R
Sbjct: 678 EAAMRAIR 685


>gi|88801469|ref|ZP_01116997.1| AAA ATPase, CDC48 [Polaribacter irgensii 23-P]
 gi|88782127|gb|EAR13304.1| AAA ATPase, CDC48 [Polaribacter irgensii 23-P]
          Length = 717

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 143/287 (49%), Positives = 196/287 (68%), Gaps = 11/287 (3%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++ + +F  A  +V PSA+REV +EVP VKW+DVGG  E+K  L EA+EWP K+ E F+
Sbjct: 425  LEVSMDNFYDAMKEVEPSAIREVFVEVPDVKWDDVGGLNEIKEALKEAIEWPLKYAELFR 484

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +  T PP GI+++GPPG  KT +A+AVASE+G+NF++VKGP++ SK++GESEK VR LF 
Sbjct: 485  KADTNPPKGIILYGPPGTGKTYLAKAVASESGVNFISVKGPQIMSKYIGESEKGVRELFK 544

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+  AP+I+F DEID L   R  ES G +V+DRV+SQ L E+DG+     V V+AATNR
Sbjct: 545  KAKQAAPTILFLDEIDSLVPRRNSESSGANVTDRVISQFLTEMDGIEDLKGVVVLAATNR 604

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             D IDPALLR GRFD L  V  P+E  RE IF+IH R      ++N+++LA  +EG  GA
Sbjct: 605  IDLIDPALLRSGRFDLLFEVPAPDEKTRENIFKIHTRNKQLQKNINLKKLAKETEGMVGA 664

Query: 983  DISLICREAAISAIEENLDASR-----------ITMQHLKTAIRHVQ 1018
            DI  ICR+A+++AI E +D S            I  +H + A++ V+
Sbjct: 665  DIEFICRKASVTAIREIIDISEGLEADPNVNIVIKKEHFEEAVQLVK 711



 Score =  223 bits (567), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 163/268 (60%), Gaps = 15/268 (5%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV +ED+GG      ++ E +E P K+ E F+R+G  PP G+ ++GPPG  KTL+ RAVA
Sbjct: 178  KVSYEDIGGLGNQVQRIREMIELPLKYPEVFERLGIDPPKGVFLYGPPGTGKTLIVRAVA 237

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE    FL + GPE+  K+ GESE+ +R +FA A+A+AP+IIF DEID +A  R      
Sbjct: 238  SETDAYFLHISGPEIMGKFYGESEERLRKVFADAQAHAPAIIFIDEIDAIAPKREDLGGE 297

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV++QLL  +DGL  R  V VI ATN P+ IDPAL RPGRFDR L V  P++  R
Sbjct: 298  KQVEKRVVAQLLSLMDGLESRGKVIVIGATNIPNTIDPALRRPGRFDRELSVSIPDKKGR 357

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE---NLDAS---- 1003
             EI  IH R +P + DV++ +LA ++ G  GAD+  + REAA++ + +   N+D      
Sbjct: 358  LEILEIHTRGMPLAIDVSLEKLAEITHGFVGADLEALAREAAMTTLRKILPNIDYELAEI 417

Query: 1004 --------RITMQHLKTAIRHVQPSEIH 1023
                     ++M +   A++ V+PS I 
Sbjct: 418  PYELLMKLEVSMDNFYDAMKEVEPSAIR 445



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 116/287 (40%), Positives = 166/287 (57%), Gaps = 37/287 (12%)

Query: 363 SNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAI 422
           S   VIN  TKV L  P    +KS        +++ ++++           GGL  +   
Sbjct: 153 SGIVVINPNTKVDLNLPKQGKNKS--------SKVSYEDI-----------GGLGNQVQR 193

Query: 423 LKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
           ++++I +          LG+ P KGV L+GPPGTGKT + R  A ++      ++GPE++
Sbjct: 194 IREMIELPLKYPEVFERLGIDPPKGVFLYGPPGTGKTLIVRAVASETDAYFLHISGPEIM 253

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD-GGE-ELSQRMVATLLNLMD 539
            + YGESE+ L +VF  A   APA++FIDE+DAIAP R+D GGE ++ +R+VA LL+LMD
Sbjct: 254 GKFYGESEERLRKVFADAQAHAPAIIFIDEIDAIAPKREDLGGEKQVEKRVVAQLLSLMD 313

Query: 540 GVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLE 599
           G+     V+VI ATN P++I+PALRRPGR DRE+ +              ++P    RLE
Sbjct: 314 GLESRGKVIVIGATNIPNTIDPALRRPGRFDRELSV--------------SIPDKKGRLE 359

Query: 600 ILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           IL     GM  + +D  +E L+  THGFVGADL AL  EAA+  LR+
Sbjct: 360 ILEIHTRGMPLA-IDVSLEKLAEITHGFVGADLEALAREAAMTTLRK 405



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 123/205 (60%), Gaps = 17/205 (8%)

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P KG++L+GPPGTGKT LA+  A +SGVN  +V GP+++S+  GESE+ + E+F  A Q+
Sbjct: 490 PPKGIILYGPPGTGKTYLAKAVASESGVNFISVKGPQIMSKYIGESEKGVRELFKKAKQA 549

Query: 503 APAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           AP ++F+DE+D++ P R  +  G  ++ R+++  L  MDG+    GV+V+AATNR D I+
Sbjct: 550 APTILFLDEIDSLVPRRNSESSGANVTDRVISQFLTEMDGIEDLKGVVVLAATNRIDLID 609

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
           PAL R GR            F LL   PA      + +  +H     ++ ++    ++ L
Sbjct: 610 PALLRSGR------------FDLLFEVPAPDEKTRENIFKIHTRNKQLQKNI---NLKKL 654

Query: 621 SMATHGFVGADLAALCNEAALVCLR 645
           +  T G VGAD+  +C +A++  +R
Sbjct: 655 AKETEGMVGADIEFICRKASVTAIR 679


>gi|331213377|ref|XP_003319370.1| hypothetical protein PGTG_01544 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309298360|gb|EFP74951.1| hypothetical protein PGTG_01544 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 718

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 139/280 (49%), Positives = 204/280 (72%), Gaps = 5/280 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            + L+  D  +A +K+RPSAMRE+++E P  +W D+GGQ  +K +L+E ++WP +H + FK
Sbjct: 413  MHLQPQDLSQALLKIRPSAMRELLVETPTTRWTDIGGQTAIKQRLLETLKWPAEHPQTFK 472

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G  P  GIL++GPPGCSKTL+A+A+A+E+GLNF+A+KG ++F+K++GESEK++R LF 
Sbjct: 473  RLGISPVRGILLYGPPGCSKTLIAKALATESGLNFIAIKGSDVFNKYLGESEKSIRDLFK 532

Query: 863  KARANAPSIIFFDEIDGLAAIRG-----KESDGVSVSDRVMSQLLVELDGLHQRVNVTVI 917
            KARAN+PSIIF DEID +A  R          G  V DRV++ LLVE+DG+ +   V V+
Sbjct: 533  KARANSPSIIFIDEIDSIAMARAGSDDLGGGGGTGVGDRVLTSLLVEMDGIEELNGVLVL 592

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            AATNRP+ IDPAL+RPGR DR+LYVGPP+   R EIF+I+ RK+     ++I +LA L++
Sbjct: 593  AATNRPEVIDPALMRPGRLDRILYVGPPDLDSRIEIFKINFRKMSVDPSLDIHKLATLTD 652

Query: 978  GCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 1017
            G TGA+I  IC++AAI+AI  + + + I  +    +I+ +
Sbjct: 653  GSTGAEIVAICQDAAINAIHRDFNVAFIVEEDFLKSIQKI 692



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/246 (38%), Positives = 142/246 (57%), Gaps = 27/246 (10%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   +++++     +  L S  G++P KG+LL+GPPGTGKT LA + A  +   
Sbjct: 172 IGGLQSQIEQIREMVELPLTRPELYSHFGIKPPKGILLYGPPGTGKTHLASIIAKSTNST 231

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           L T++   + S  +GE EQ + E+F  A + +P+++ IDE+D + P+R + G E+ +RMV
Sbjct: 232 LLTLSTATISSAYHGEGEQKIFEIFAEAKEKSPSMIMIDEIDGLFPSR-EIGSEVDRRMV 290

Query: 532 ATLLNLMDGVCRTDG-----------VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
             LL  MDG+   +            V+VI  TNRP +++PALRRPGR DRE+EI     
Sbjct: 291 GALLTCMDGMEEKNDDPGLDQEENPRVIVIGTTNRPQTLDPALRRPGRFDRELEI----- 345

Query: 581 FSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAA 640
                     +P+   RLEIL  LL    H L  +E++ ++  THGFVGADL AL  EA 
Sbjct: 346 ---------GIPNGGARLEILQVLLRKTPHQLTAAEIKEVADKTHGFVGADLLALIREAG 396

Query: 641 LVCLRR 646
           L  ++R
Sbjct: 397 LGAIKR 402



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/264 (36%), Positives = 144/264 (54%), Gaps = 21/264 (7%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ +E +GG +    Q+ E VE P    E +   G +PP GIL++GPPG  KT +A  +A
Sbjct: 166  QIGYEAIGGLQSQIEQIREMVELPLTRPELYSHFGIKPPKGILLYGPPGTGKTHLASIIA 225

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
                   L +    + S + GE E+ +  +FA+A+  +PS+I  DEIDGL   R     G
Sbjct: 226  KSTNSTLLTLSTATISSAYHGEGEQKIFEIFAEAKEKSPSMIMIDEIDGLFPSR---EIG 282

Query: 891  VSVSDRVMSQLLVELDGLHQRVN-----------VTVIAATNRPDKIDPALLRPGRFDRL 939
              V  R++  LL  +DG+ ++ +           V VI  TNRP  +DPAL RPGRFDR 
Sbjct: 283  SEVDRRMVGALLTCMDGMEEKNDDPGLDQEENPRVIVIGTTNRPQTLDPALRRPGRFDRE 342

Query: 940  LYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEE 998
            L +G PN   R EI ++ LRK P   +   I+E+A  + G  GAD+  + REA + AI+ 
Sbjct: 343  LEIGIPNGGARLEILQVLLRKTPHQLTAAEIKEVADKTHGFVGADLLALIREAGLGAIKR 402

Query: 999  NLDASRITMQHLKTAIRHVQPSEI 1022
            +L A+ I +Q +     H+QP ++
Sbjct: 403  SL-ATHIALQDM-----HLQPQDL 420



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 144/261 (55%), Gaps = 28/261 (10%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T   LG+ P +G+LL+GPPG  KT +A+  A +SG+N   + G +V ++  GESE+++ +
Sbjct: 470 TFKRLGISPVRGILLYGPPGCSKTLIAKALATESGLNFIAIKGSDVFNKYLGESEKSIRD 529

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR-------KDGGEELSQRMVATLLNLMDGVCRTDGV 547
           +F  A  ++P+++FIDE+D+IA AR         GG  +  R++ +LL  MDG+   +GV
Sbjct: 530 LFKKARANSPSIIFIDEIDSIAMARAGSDDLGGGGGTGVGDRVLTSLLVEMDGIEELNGV 589

Query: 548 LVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSG 607
           LV+AATNRP+ I+PAL RPGRLDR           +L   P   P    R+EI       
Sbjct: 590 LVLAATNRPEVIDPALMRPGRLDR-----------ILYVGP---PDLDSRIEIFKINFRK 635

Query: 608 M--EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ--TSSDVLHSTGTL 663
           M  + SL   ++  L+  T G  GA++ A+C +AA+  + R   +      D L S   +
Sbjct: 636 MSVDPSL---DIHKLATLTDGSTGAEIVAICQDAAINAIHRDFNVAFIVEEDFLKSIQKI 692

Query: 664 FEFEGHSDTMLQDSDCSRNIT 684
            + +  +  ++Q  +  R++ 
Sbjct: 693 AKKQAINSQLIQHYEKWRDLV 713


>gi|307596113|ref|YP_003902430.1| AAA ATPase [Vulcanisaeta distributa DSM 14429]
 gi|307551314|gb|ADN51379.1| AAA family ATPase, CDC48 subfamily [Vulcanisaeta distributa DSM
            14429]
          Length = 748

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 144/312 (46%), Positives = 212/312 (67%), Gaps = 16/312 (5%)

Query: 738  EKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKH 797
            E+   +++ + DF +A   ++P+ +REVI+EVP+V W+D+GG   VK +L E VEWP K+
Sbjct: 433  EQLARIRIRMRDFLEAMKYIQPTVLREVIVEVPEVHWDDIGGYENVKQELKEMVEWPLKY 492

Query: 798  QEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 857
               F+ +G  PP GIL+FGPPG  KTL+A+AVA+E+  NF+AV+GPE+ SKW GESE+A+
Sbjct: 493  PRYFEELGVEPPKGILLFGPPGTGKTLLAKAVATESNANFIAVRGPEILSKWFGESERAI 552

Query: 858  RSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVI 917
            R +F KAR  AP +IFFDEID +A  RG   D    +DR+++QLL E+DG+    NV VI
Sbjct: 553  REIFKKARMAAPCVIFFDEIDAIAPARGLRVDS-GATDRIVNQLLAEMDGIAPLKNVVVI 611

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN------IRE 971
            AATNR D IDPALLRPGRFDR++YV PP+   R EI ++H+R +  + DV       +R+
Sbjct: 612  AATNRADIIDPALLRPGRFDRIVYVPPPDANARFEILKVHIRGLKLADDVKDGNYKYLRD 671

Query: 972  LACLSEGCTGADISLICREAAISAIEENLDASR-----ITMQHLKTAIRHVQPS----EI 1022
            LA  +EG TGAD++ + REAA+ A+ E + ++      + ++H + A++ V PS    +I
Sbjct: 672  LARRTEGYTGADLAALVREAAMLALRETIRSNTNQVKPVGIEHFEEALKVVPPSLSKQDI 731

Query: 1023 HSYKELSAKFQR 1034
              ++E++   +R
Sbjct: 732  ARFEEMARNLRR 743



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 126/297 (42%), Positives = 186/297 (62%), Gaps = 33/297 (11%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            ++VR   +RE+ L +P+V WED+G   E K ++ E +E P +H E FK +G  PP G+L+
Sbjct: 161  VQVREEPVREMELTMPRVTWEDIGDLEEAKRKIRELIELPLRHPEIFKHLGIEPPKGVLL 220

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
             GPPG  KTL+A+AVASEA   F+++ GPE+ SK+ GESE  +R +F +A+ NAP+IIF 
Sbjct: 221  IGPPGTGKTLLAKAVASEANAYFISINGPEIMSKYYGESEAKLREIFEEAKKNAPAIIFI 280

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRP+ +DPAL RPG
Sbjct: 281  DEIDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQVIVIGATNRPEAVDPALRRPG 338

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIP-CSSD------------VNIRELACLSEGCTG 981
            RFDR +Y+  P++  R+EI ++H R +P C+ D            VNI E+A ++ G TG
Sbjct: 339  RFDREIYISMPDKNARKEILQVHTRNVPLCTEDDVKEKICDPSDVVNIDEIAEMTHGYTG 398

Query: 982  ADISLICREAAISAIEENLDAS------------------RITMQHLKTAIRHVQPS 1020
            AD++ + +EAA+  + E +D +                  RI M+    A++++QP+
Sbjct: 399  ADLAALVKEAAMIRLREAIDVTKEIDLDQPQIPPEQLARIRIRMRDFLEAMKYIQPT 455



 Score =  189 bits (479), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/233 (42%), Positives = 137/233 (58%), Gaps = 26/233 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL GPPGTGKT LA+  A ++     ++NGPE++S+ YGESE  L E+
Sbjct: 207 FKHLGIEPPKGVLLIGPPGTGKTLLAKAVASEANAYFISINGPEIMSKYYGESEAKLREI 266

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 267 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVIVIGATNR 326

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++PALRRPGR DREI I M              P    R EIL      +     D 
Sbjct: 327 PEAVDPALRRPGRFDREIYISM--------------PDKNARKEILQVHTRNVPLCTEDD 372

Query: 616 ------------EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDV 656
                        ++ ++  THG+ GADLAAL  EAA++ LR    +    D+
Sbjct: 373 VKEKICDPSDVVNIDEIAEMTHGYTGADLAALVKEAAMIRLREAIDVTKEIDL 425



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/234 (42%), Positives = 135/234 (57%), Gaps = 26/234 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A +S  N   V GPE++S+ +GESE+A+ E+
Sbjct: 496 FEELGVEPPKGILLFGPPGTGKTLLAKAVATESNANFIAVRGPEILSKWFGESERAIREI 555

Query: 496 FDSASQSAPAVVFIDELDAIAPARK---DGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A  +AP V+F DE+DAIAPAR    D G   + R+V  LL  MDG+     V+VIAA
Sbjct: 556 FKKARMAAPCVIFFDEIDAIAPARGLRVDSGA--TDRIVNQLLAEMDGIAPLKNVVVIAA 613

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME--H 610
           TNR D I+PAL RPGR DR + +                P    R EIL   + G++   
Sbjct: 614 TNRADIIDPALLRPGRFDRIVYV--------------PPPDANARFEILKVHIRGLKLAD 659

Query: 611 SLLDSEVEY---LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG 661
            + D   +Y   L+  T G+ GADLAAL  EAA++ LR    I+++++ +   G
Sbjct: 660 DVKDGNYKYLRDLARRTEGYTGADLAALVREAAMLALR--ETIRSNTNQVKPVG 711


>gi|322368817|ref|ZP_08043384.1| AAA family ATPase, CDC48 subfamily protein [Haladaptatus
            paucihalophilus DX253]
 gi|320551548|gb|EFW93195.1| AAA family ATPase, CDC48 subfamily protein [Haladaptatus
            paucihalophilus DX253]
          Length = 753

 Score =  298 bits (762), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 147/305 (48%), Positives = 203/305 (66%), Gaps = 13/305 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+   DF++A   + PSA+REV +EVP V W+DVGG    K +L E ++WP  + E F
Sbjct: 430  SLKVTEADFKEALKGIEPSALREVFVEVPDVTWQDVGGLENTKERLRETIQWPLDYPEVF 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + +  +   G+LM+GPPG  KTLMA+AVA+E+  NF+++KGPEL SKWVGESEK VR +F
Sbjct: 490  QALDMQAAKGVLMYGPPGTGKTLMAKAVANESDSNFISIKGPELLSKWVGESEKGVREVF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
            +KAR NAP+++FFDEID +A  RG++   G  VS+RV+SQLL ELDGL +  +V VIA +
Sbjct: 550  SKARENAPTVVFFDEIDSIATERGRDGGGGTQVSERVVSQLLTELDGLEELEDVVVIATS 609

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD ID ALLRPGR DR ++V  P+E  R  IF +H R  P + DV++ ELA  ++G  
Sbjct: 610  NRPDLIDSALLRPGRLDRHVHVPVPDEEARHAIFEVHTRHKPLADDVDLEELAEQTDGYV 669

Query: 981  GADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPSEIHSYKEL 1028
            GADI  +CREAA++A            I E++   RIT +H + A+  V PS     +E 
Sbjct: 670  GADIEAVCREAAMAASREFIESVSPDDIGESVGNVRITAEHFEDALGEVTPSVTEETRER 729

Query: 1029 SAKFQ 1033
             A+ +
Sbjct: 730  YAEIE 734



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 115/267 (43%), Positives = 168/267 (62%), Gaps = 19/267 (7%)

Query: 770  PKVKWEDVGG-QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            P V +ED+GG +RE++ Q+ E +E P +H E F R+G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  PDVTYEDIGGLERELE-QVREMIELPMRHPELFSRLGIDPPKGVLLHGPPGTGKTLMAKA 243

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E    F  + GPE+ SK+ GESE+ +R +F +A  N+P+IIF DE+D +A  R  E 
Sbjct: 244  VANEIDAYFQTISGPEIMSKYYGESEEQLREVFEEAEQNSPAIIFIDELDSIAPKR--EE 301

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D +DPAL R GRFDR + +G P+  
Sbjct: 302  AGGDVERRVVAQLLSLMDGLEERGEVTVIAATNRVDAVDPALRRGGRFDREIEIGVPDRE 361

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDAS 1003
             R EI ++H R +P +  V++   A  + G  GAD+  + RE+A++A+     E +LD+ 
Sbjct: 362  GRLEILQVHTRGMPLADGVDLEAYADNTHGFVGADLESLARESAMNALRRVRPELDLDSE 421

Query: 1004 ----------RITMQHLKTAIRHVQPS 1020
                      ++T    K A++ ++PS
Sbjct: 422  EIPADVLESLKVTEADFKEALKGIEPS 448



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/246 (46%), Positives = 156/246 (63%), Gaps = 18/246 (7%)

Query: 403 QATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           QA  +     +GGL +E   ++++I +        S LG+ P KGVLLHGPPGTGKT +A
Sbjct: 182 QARPDVTYEDIGGLERELEQVREMIELPMRHPELFSRLGIDPPKGVLLHGPPGTGKTLMA 241

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
           +  A++      T++GPE++S+ YGESE+ L EVF+ A Q++PA++FIDELD+IAP R++
Sbjct: 242 KAVANEIDAYFQTISGPEIMSKYYGESEEQLREVFEEAEQNSPAIIFIDELDSIAPKREE 301

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
            G ++ +R+VA LL+LMDG+     V VIAATNR D+++PALRR GR DREIEI      
Sbjct: 302 AGGDVERRVVAQLLSLMDGLEERGEVTVIAATNRVDAVDPALRRGGRFDREIEI------ 355

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAA 640
                    VP    RLEIL     GM   L D  ++E  +  THGFVGADL +L  E+A
Sbjct: 356 --------GVPDREGRLEILQVHTRGM--PLADGVDLEAYADNTHGFVGADLESLARESA 405

Query: 641 LVCLRR 646
           +  LRR
Sbjct: 406 MNALRR 411



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/331 (35%), Positives = 178/331 (53%), Gaps = 38/331 (11%)

Query: 385 KSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLR 442
           K   +G  P+A  E F  V     QD+   GGL      L++ I           +L ++
Sbjct: 439 KEALKGIEPSALREVFVEVPDVTWQDV---GGLENTKERLRETIQWPLDYPEVFQALDMQ 495

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
             KGVL++GPPGTGKT +A+  A++S  N  ++ GPE++S+  GESE+ + EVF  A ++
Sbjct: 496 AAKGVLMYGPPGTGKTLMAKAVANESDSNFISIKGPELLSKWVGESEKGVREVFSKAREN 555

Query: 503 APAVVFIDELDAIAPAR-KD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
           AP VVF DE+D+IA  R +D  GG ++S+R+V+ LL  +DG+   + V+VIA +NRPD I
Sbjct: 556 APTVVFFDEIDSIATERGRDGGGGTQVSERVVSQLLTELDGLEELEDVVVIATSNRPDLI 615

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS-GMEHSLL--DSE 616
           + AL RPGRLDR +                 VP P +  E  HA+      H  L  D +
Sbjct: 616 DSALLRPGRLDRHVH----------------VPVPDE--EARHAIFEVHTRHKPLADDVD 657

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQD 676
           +E L+  T G+VGAD+ A+C EAA+   R + +  +  D+  S G +     H +  L  
Sbjct: 658 LEELAEQTDGYVGADIEAVCREAAMAASREFIESVSPDDIGESVGNVRITAEHFEDAL-- 715

Query: 677 SDCSRNITESSR-------DCLDSASPCTSD 700
            + + ++TE +R       +  D+A P T +
Sbjct: 716 GEVTPSVTEETRERYAEIEERFDTAEPETKE 746


>gi|330833937|ref|YP_004408665.1| AAA family ATPase [Metallosphaera cuprina Ar-4]
 gi|329566076|gb|AEB94181.1| AAA family ATPase, CDC48 subfamily protein [Metallosphaera cuprina
           Ar-4]
          Length = 753

 Score =  298 bits (762), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 135/256 (52%), Positives = 188/256 (73%), Gaps = 1/256 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF  A   V+P+ +REV +EVPKV+W ++GG   VK QL EAVEWP +  + F 
Sbjct: 422 LKVTMEDFMNAMKFVQPTLLREVYVEVPKVRWSEIGGLDNVKQQLREAVEWPMRFPDVFN 481

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           + G RPP G+L+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F 
Sbjct: 482 KTGIRPPKGVLLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESEKAIREIFK 541

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           +AR  AP++IFFDEID +A +RG   D   V++R+++QLL E+DG+     V VIAATNR
Sbjct: 542 RARQTAPTVIFFDEIDSIAPMRGMGYDS-GVTERMVNQLLSEMDGIVPLSKVVVIAATNR 600

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD IDP LLRPGRFDRL+YV PP++  R EI ++H + +P + DV++  LA  +EG TGA
Sbjct: 601 PDIIDPGLLRPGRFDRLIYVPPPDKQARLEILKVHTKSVPLAPDVDLNALADKTEGYTGA 660

Query: 983 DISLICREAAISAIEE 998
           D+  + REA + ++ +
Sbjct: 661 DLEALVREATMISLRQ 676



 Score =  242 bits (617), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 123/285 (43%), Positives = 178/285 (62%), Gaps = 22/285 (7%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            M ++   +RE  +  P+V WED+G   +VK +L E +E P KH E F+ +G  PP G+L+
Sbjct: 158  MTIKEEPVREAQV-YPRVTWEDIGDLDDVKEKLREMIELPMKHPELFQHLGIEPPKGVLL 216

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+ARA+A+E G  F+++ GPE+ SK+ GESE+ +R +F  A  NAPSIIF 
Sbjct: 217  YGPPGVGKTLLARALANEIGAYFVSINGPEIMSKFYGESEQRLREIFDDADKNAPSIIFI 276

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV+SQLL  +DG+  R  + VI ATNRP+ +D AL RPG
Sbjct: 277  DEIDAIAPSR-EEVTG-EVEKRVVSQLLTLMDGIKGRGRIVVIGATNRPNAVDQALRRPG 334

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + + PP+   R+EI ++H R +P S DVN+  +A ++ G TGADI+ + +EAA+ 
Sbjct: 335  RFDREIEIRPPDTKARKEILQVHTRNMPLSDDVNLNLIAEMTYGYTGADIAALAKEAAMY 394

Query: 995  AIE-------------------ENLDASRITMQHLKTAIRHVQPS 1020
            A+                    E L   ++TM+    A++ VQP+
Sbjct: 395  ALRRFINSGDRKKLLEQDRLSPEVLKELKVTMEDFMNAMKFVQPT 439



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 137/212 (64%), Gaps = 15/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL+GPPG GKT LAR  A++ G    ++NGPE++S+ YGESEQ L E+
Sbjct: 203 FQHLGIEPPKGVLLYGPPGVGKTLLARALANEIGAYFVSINGPEIMSKFYGESEQRLREI 262

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           FD A ++AP+++FIDE+DAIAP+R++   E+ +R+V+ LL LMDG+     ++VI ATNR
Sbjct: 263 FDDADKNAPSIIFIDEIDAIAPSREEVTGEVEKRVVSQLLTLMDGIKGRGRIVVIGATNR 322

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++++ ALRRPGR DREIEI                P    R EIL      M  S  D 
Sbjct: 323 PNAVDQALRRPGRFDREIEI--------------RPPDTKARKEILQVHTRNMPLS-DDV 367

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            +  ++  T+G+ GAD+AAL  EAA+  LRR+
Sbjct: 368 NLNLIAEMTYGYTGADIAALAKEAAMYALRRF 399



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/240 (43%), Positives = 140/240 (58%), Gaps = 21/240 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S++GGL      L++ +          +  G+RP KGVLL GPPGTGKT LA+  A +SG
Sbjct: 454 SEIGGLDNVKQQLREAVEWPMRFPDVFNKTGIRPPKGVLLFGPPGTGKTMLAKAVATESG 513

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE-LSQ 528
            N   V GPEV+S+  GESE+A+ E+F  A Q+AP V+F DE+D+IAP R  G +  +++
Sbjct: 514 ANFIAVRGPEVLSKWVGESEKAIREIFKRARQTAPTVIFFDEIDSIAPMRGMGYDSGVTE 573

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           RMV  LL+ MDG+     V+VIAATNRPD I+P L RPGR DR I               
Sbjct: 574 RMVNQLLSEMDGIVPLSKVVVIAATNRPDIIDPGLLRPGRFDRLI--------------- 618

Query: 589 AAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             VP P +  RLEIL      +  +  D ++  L+  T G+ GADL AL  EA ++ LR+
Sbjct: 619 -YVPPPDKQARLEILKVHTKSVPLA-PDVDLNALADKTEGYTGADLEALVREATMISLRQ 676


>gi|401887329|gb|EJT51319.1| peroxisome biosynthesis protein PAS1 (Peroxin-1) [Trichosporon asahii
            var. asahii CBS 2479]
          Length = 753

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 140/289 (48%), Positives = 202/289 (69%), Gaps = 12/289 (4%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            +L   D +     +RPSAMREV +E P V+W D+GGQ EVK +L E VEWP  H + F R
Sbjct: 460  QLTYADMQATLPTIRPSAMREVFVETPTVRWSDIGGQAEVKQKLRECVEWPLTHADTFAR 519

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G   P G+L++GPPGCSKT+ A+A+A+E+G+NF+AVKGPEL +K+VGESE+AVR +F K
Sbjct: 520  LGVDAPRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAVREIFRK 579

Query: 864  ARANAPSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            ARA +PSI+FFDEID L A R  G+   G      V++ LL E+DG+     VTV+AATN
Sbjct: 580  ARAASPSIVFFDEIDALGAARDIGEGHGG------VLTSLLNEMDGIEALSGVTVVAATN 633

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD +D AL RPGR DR+LYVG P+   R+EIF++ ++ +    +V++ ELA ++EGC+G
Sbjct: 634  RPDVLDAALTRPGRLDRILYVGAPDLLTRQEIFKLRMKSMAVDPEVDVAELARITEGCSG 693

Query: 982  ADISLICREAAISAIEENLDASRITMQHL----KTAIRHVQPSEIHSYK 1026
            A+++ IC++AA++ + E+L+A  +  +HL    +T  R + P  I  ++
Sbjct: 694  AEVASICQDAALATMNEDLNAPFVKKEHLLNSARTVRRRITPEMIEFFE 742



 Score =  189 bits (481), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 153/242 (63%), Gaps = 21/242 (8%)

Query: 412 KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLAR-LCAHDSG 469
           +LGGL  +   +K ++ +        +  GL P +G+LLHGPPGTGKT+LAR + A   G
Sbjct: 224 QLGGLEPQIKQVKALLDLPLRNPEVFTQFGLTPPRGLLLHGPPGTGKTALARAIAASTPG 283

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE--ELS 527
            +   VNGPE+ S  +GE+E+ L  +F+ A + +P ++ +DE+DA+ P R+DGGE  E+ 
Sbjct: 284 CSCIVVNGPELSSAFHGETEERLRSIFEEARKRSPCIIVLDEVDALCP-RRDGGEGGEVE 342

Query: 528 QRMVATLLNLMDGVCR--TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +R+VA LL LMDG+     + V+V+AATNRP+SI+PALRRPGR DREIEI          
Sbjct: 343 RRVVAMLLTLMDGMTSDAKEHVVVVAATNRPNSIDPALRRPGRFDREIEI---------- 392

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                +P  A R +IL  +LS M ++L   E+  ++  THG+VGADL +L  E+A   ++
Sbjct: 393 ----GIPDAAGRRQILDIMLSKMPNALSAEEIASIAARTHGYVGADLGSLVRESASAAIQ 448

Query: 646 RY 647
           R+
Sbjct: 449 RW 450



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/256 (37%), Positives = 148/256 (57%), Gaps = 10/256 (3%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA-SEAGL 835
            +GG      Q+   ++ P ++ E F + G  PP G+L+ GPPG  KT +ARA+A S  G 
Sbjct: 225  LGGLEPQIKQVKALLDLPLRNPEVFTQFGLTPPRGLLLHGPPGTGKTALARAIAASTPGC 284

Query: 836  NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 895
            + + V GPEL S + GE+E+ +RS+F +AR  +P II  DE+D L   R    +G  V  
Sbjct: 285  SCIVVNGPELSSAFHGETEERLRSIFEEARKRSPCIIVLDEVDALCP-RRDGGEGGEVER 343

Query: 896  RVMSQLLVELDGL--HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
            RV++ LL  +DG+    + +V V+AATNRP+ IDPAL RPGRFDR + +G P+   R +I
Sbjct: 344  RVVAMLLTLMDGMTSDAKEHVVVVAATNRPNSIDPALRRPGRFDREIEIGIPDAAGRRQI 403

Query: 954  FRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS-----RITM 1007
              I L K+P + S   I  +A  + G  GAD+  + RE+A +AI+    A      ++T 
Sbjct: 404  LDIMLSKMPNALSAEEIASIAARTHGYVGADLGSLVRESASAAIQRWHTAGGEGSPQLTY 463

Query: 1008 QHLKTAIRHVQPSEIH 1023
              ++  +  ++PS + 
Sbjct: 464  ADMQATLPTIRPSAMR 479



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 21/212 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T + LG+   +GVLL+GPPG  KT  A+  A +SG+N   V GPE++++  GESE+A+ E
Sbjct: 516 TFARLGVDAPRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAVRE 575

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F  A  ++P++VF DE+DA+  AR  G  E    ++ +LLN MDG+    GV V+AATN
Sbjct: 576 IFRKARAASPSIVFFDEIDALGAARDIG--EGHGGVLTSLLNEMDGIEALSGVTVVAATN 633

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD ++ AL RPGRLDR + +    L +              R EI    +  M    +D
Sbjct: 634 RPDVLDAALTRPGRLDRILYVGAPDLLT--------------RQEIFKLRMKSMA---VD 676

Query: 615 SEVEYLSMA--THGFVGADLAALCNEAALVCL 644
            EV+   +A  T G  GA++A++C +AAL  +
Sbjct: 677 PEVDVAELARITEGCSGAEVASICQDAALATM 708


>gi|448318626|ref|ZP_21508143.1| hypothetical protein C492_19177 [Natronococcus jeotgali DSM 18795]
 gi|445598416|gb|ELY52473.1| hypothetical protein C492_19177 [Natronococcus jeotgali DSM 18795]
          Length = 723

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 145/291 (49%), Positives = 198/291 (68%), Gaps = 11/291 (3%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++   DF  A   V PSAMREV +EVP V +EDVGG  E K +L EA++WP +H +A++
Sbjct: 415  IEVTAADFRSALRGVEPSAMREVFVEVPDVTYEDVGGLDEAKGRLREAIQWPMEHADAYE 474

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+   P  G+L+ GPPG  KTL+A+AVA+E+  NF++VKGPELF K+VGESEK VR +F 
Sbjct: 475  RVDLSPAKGVLLHGPPGTGKTLLAKAVANESQSNFISVKGPELFDKYVGESEKGVREVFE 534

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARANAP+IIFFDEID +A+ RG      +V +RV+SQLL ELDGL +  +V V+AA+NR
Sbjct: 535  KARANAPTIIFFDEIDAIASKRGSGGGDSNVGERVVSQLLTELDGLEELEDVVVVAASNR 594

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            P+ ID ALLRPGR DR + V  P+E  R EIFRIH +  P ++DV++  LA  +EG TGA
Sbjct: 595  PELIDDALLRPGRLDRHVEVAEPDEAARREIFRIHTQDRPLAADVDLDTLAEETEGYTGA 654

Query: 983  DISLICREAAISAIEEN-----------LDASRITMQHLKTAIRHVQPSEI 1022
            D+  +CREAA  A+ E+           ++A  +T  H + A+  + P  +
Sbjct: 655  DVEAVCREAATIAVREHVEREAAGESSPVEAIELTADHFERALEEISPDAV 705



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/268 (44%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E P V +EDVGG  +   Q+ E +E P +H E F+ +G  PP G+L+ GPPG  KTL+AR
Sbjct: 167  ETPTVTYEDVGGLDDELEQVREMIELPMRHPELFRTLGIEPPKGVLLHGPPGTGKTLIAR 226

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   +F+ + GPE+ SK+ GESE+ +R +F +A  N PSI+F DE+D +A  R  E
Sbjct: 227  AVANEVDAHFVTLSGPEIMSKYYGESEEQLREIFEEAAENEPSIVFIDELDSVAPKR--E 284

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
                 V  RV++QLL  +DGL  R  +TVI  TNR D IDPAL RPGRFDR + +G P+ 
Sbjct: 285  DVQGDVERRVVAQLLSLMDGLEDRGEITVIGTTNRVDAIDPALRRPGRFDREIEIGAPDA 344

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDA 1002
              REEI +IH R +P S DV++   A  + G  GAD+  + +EAA++A+     E +L+A
Sbjct: 345  GGREEILQIHTRGMPLSEDVDLERFAENTHGFVGADLENLAKEAAMTAMRRLRPELDLEA 404

Query: 1003 SRI----------TMQHLKTAIRHVQPS 1020
              I          T    ++A+R V+PS
Sbjct: 405  DEIDAEVLERIEVTAADFRSALRGVEPS 432



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/235 (45%), Positives = 148/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +         +LG+ P KGVLLHGPPGTGKT +AR  A++   +
Sbjct: 176 VGGLDDELEQVREMIELPMRHPELFRTLGIEPPKGVLLHGPPGTGKTLIARAVANEVDAH 235

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A+++ P++VFIDELD++AP R+D   ++ +R+V
Sbjct: 236 FVTLSGPEIMSKYYGESEEQLREIFEEAAENEPSIVFIDELDSVAPKREDVQGDVERRVV 295

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     + VI  TNR D+I+PALRRPGR DREIEI                
Sbjct: 296 AQLLSLMDGLEDRGEITVIGTTNRVDAIDPALRRPGRFDREIEI--------------GA 341

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S  D ++E  +  THGFVGADL  L  EAA+  +RR
Sbjct: 342 PDAGGREEILQIHTRGMPLS-EDVDLERFAENTHGFVGADLENLAKEAAMTAMRR 395



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/276 (36%), Positives = 154/276 (55%), Gaps = 24/276 (8%)

Query: 385 KSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLR 442
           +S   G  P+A  E F  V     +D+   GGL +    L++ I            + L 
Sbjct: 423 RSALRGVEPSAMREVFVEVPDVTYEDV---GGLDEAKGRLREAIQWPMEHADAYERVDLS 479

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P KGVLLHGPPGTGKT LA+  A++S  N  +V GPE+  +  GESE+ + EVF+ A  +
Sbjct: 480 PAKGVLLHGPPGTGKTLLAKAVANESQSNFISVKGPELFDKYVGESEKGVREVFEKARAN 539

Query: 503 APAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           AP ++F DE+DAIA  R  GG +  + +R+V+ LL  +DG+   + V+V+AA+NRP+ I+
Sbjct: 540 APTIIFFDEIDAIASKRGSGGGDSNVGERVVSQLLTELDGLEELEDVVVVAASNRPELID 599

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL-LDSEVEY 619
            AL RPGRLDR +E+              A P  A R EI    +   +  L  D +++ 
Sbjct: 600 DALLRPGRLDRHVEV--------------AEPDEAARREIFR--IHTQDRPLAADVDLDT 643

Query: 620 LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
           L+  T G+ GAD+ A+C EAA + +R + + + + +
Sbjct: 644 LAEETEGYTGADVEAVCREAATIAVREHVEREAAGE 679


>gi|355571230|ref|ZP_09042482.1| AAA family ATPase, CDC48 subfamily [Methanolinea tarda NOBI-1]
 gi|354825618|gb|EHF09840.1| AAA family ATPase, CDC48 subfamily [Methanolinea tarda NOBI-1]
          Length = 793

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 158/338 (46%), Positives = 217/338 (64%), Gaps = 26/338 (7%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DFE+AR  V PSAMREV++EVP V WED+GG  EVK +L EAVEWP ++ + F+
Sbjct: 423  LKVTKEDFEEARKHVEPSAMREVLVEVPDVTWEDIGGLDEVKQELREAVEWPLRYPQVFE 482

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++ TRPP GIL+FGPPG  KTL+A+AVA+E+  NF++VKGPEL SKWVGESEK VR +F 
Sbjct: 483  KLQTRPPKGILLFGPPGTGKTLLAKAVANESECNFISVKGPELLSKWVGESEKGVREVFR 542

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  +P+IIFFDE+D L   RG       V++ V+SQ+L ELDGL +  NVTVI ATNR
Sbjct: 543  KARQASPAIIFFDEVDALVPKRGMYMGSSHVTESVVSQILTELDGLEELKNVTVIGATNR 602

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP--CSSDVNIRELACLSEGCT 980
            PD +DPAL+RPGR +R +YV PP+   R++IF ++L       + DV I +L  ++EG  
Sbjct: 603  PDMLDPALMRPGRMERHIYVPPPDAESRKKIFEVYLGSGGQLVTGDVKIDDLVAVTEGYV 662

Query: 981  GADISLICREAAISAIEENL------------DA---SRITMQHLKTAIRHVQPS----- 1020
            GADI  + REA + A+ E +            DA    RI+ +H   A++ V+ S     
Sbjct: 663  GADIEALVREAKLCAMREFISVMGGKSEQEIADAVVNVRISRKHFDEALKKVKGSMDRES 722

Query: 1021 ----EIHSYKELSAKFQRLVHSNAEADESGYQLRPSKS 1054
                E  +++ L  + QR +  NA A     ++R  ++
Sbjct: 723  LEAAERMAWEILYNQEQRTILENAVAALKQAEIRTGRT 760



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/299 (41%), Positives = 182/299 (60%), Gaps = 18/299 (6%)

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
            +S KG A+  E    E       P   ++   E+  V +ED+GG       + E +E P 
Sbjct: 146  VSPKGIAIVTEDTQIELKETPYEPEERKKG--EITDVHYEDIGGLTRELELVREMIELPL 203

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            +H E F+R+G  PP G+L++GPPG  KTL+A+AVA+E   +F+++ GPE+ SK+ GESE 
Sbjct: 204  RHPELFERLGIDPPKGVLLYGPPGTGKTLIAKAVANEVDAHFISISGPEIMSKYYGESEG 263

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
             +R +F +A+ NAP+IIF DEID +A  R +E+ G  V  RV++QLL  +DGL  R  V 
Sbjct: 264  RLREVFEEAQENAPAIIFIDEIDSIAP-RREETKG-EVERRVVAQLLSLMDGLKARGQVI 321

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL 975
            VIAATN PD IDPAL R GRFDR + +G P++  R EIF++H R +P + DV + + A  
Sbjct: 322  VIAATNIPDAIDPALRRGGRFDREIEIGIPDKKGRLEIFQVHTRGVPLADDVRLDDYAET 381

Query: 976  SEGCTGADISLICREAAISAIE--------------ENLDASRITMQHLKTAIRHVQPS 1020
            + G  GADI+L+ +EAA+ A+               + L+  ++T +  + A +HV+PS
Sbjct: 382  THGFVGADIALLVKEAAMHALRKVLPRLDLDKEIPADMLEQLKVTKEDFEEARKHVEPS 440



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 152/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL++E  +++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++   +
Sbjct: 185 IGGLTRELELVREMIELPLRHPELFERLGIDPPKGVLLYGPPGTGKTLIAKAVANEVDAH 244

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE  L EVF+ A ++APA++FIDE+D+IAP R++   E+ +R+V
Sbjct: 245 FISISGPEIMSKYYGESEGRLREVFEEAQENAPAIIFIDEIDSIAPRREETKGEVERRVV 304

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VIAATN PD+I+PALRR GR DREIEI               +
Sbjct: 305 AQLLSLMDGLKARGQVIVIAATNIPDAIDPALRRGGRFDREIEI--------------GI 350

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    RLEI      G+  +  D  ++  +  THGFVGAD+A L  EAA+  LR+
Sbjct: 351 PDKKGRLEIFQVHTRGVPLA-DDVRLDDYAETTHGFVGADIALLVKEAAMHALRK 404



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/217 (39%), Positives = 124/217 (57%), Gaps = 17/217 (7%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
                L  RP KG+LL GPPGTGKT LA+  A++S  N  +V GPE++S+  GESE+ + 
Sbjct: 479 QVFEKLQTRPPKGILLFGPPGTGKTLLAKAVANESECNFISVKGPELLSKWVGESEKGVR 538

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           EVF  A Q++PA++F DE+DA+ P R    G   +++ +V+ +L  +DG+     V VI 
Sbjct: 539 EVFRKARQASPAIIFFDEVDALVPKRGMYMGSSHVTESVVSQILTELDGLEELKNVTVIG 598

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL-SGMEH 610
           ATNRPD ++PAL RPGR++R I +                P    R +I    L SG + 
Sbjct: 599 ATNRPDMLDPALMRPGRMERHIYV--------------PPPDAESRKKIFEVYLGSGGQL 644

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
              D +++ L   T G+VGAD+ AL  EA L  +R +
Sbjct: 645 VTGDVKIDDLVAVTEGYVGADIEALVREAKLCAMREF 681


>gi|397780464|ref|YP_006544937.1| transitional endoplasmic reticulum ATPase [Methanoculleus bourgensis
            MS2]
 gi|396938966|emb|CCJ36221.1| transitional endoplasmic reticulum ATPase [Methanoculleus bourgensis
            MS2]
          Length = 807

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 160/344 (46%), Positives = 218/344 (63%), Gaps = 25/344 (7%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   V PSAMREV++E+P VKWEDVGG  +VK +L EAVEWP K+ E F  + T P
Sbjct: 429  DFLEAHKHVEPSAMREVLVEIPDVKWEDVGGLEDVKAELAEAVEWPLKYPEIFDALETEP 488

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+FGPPG  KTL+A+AVA+E+  NF++VKGPEL SKWVGESE+ VR +F KAR  A
Sbjct: 489  PRGILLFGPPGTGKTLLAKAVANESESNFISVKGPELLSKWVGESERGVRQVFRKARQAA 548

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSIIFFDEID L   RG       V++ V+SQ+L ELDGL +  NV V+ ATNRPD +D 
Sbjct: 549  PSIIFFDEIDALMPKRGAYIGSSHVTESVVSQILTELDGLEELNNVVVLGATNRPDMLDE 608

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLR-KIPCSSDVNIRELACLSEGCTGADISLI 987
            ALLRPGR DR++YV PP+   R++IF ++LR +   ++DV+I EL   +EG  GADI  +
Sbjct: 609  ALLRPGRLDRMIYVPPPDREGRKKIFEVYLRNREILANDVDIDELVERTEGYVGADIEAL 668

Query: 988  CREAAISAIEENLDAS---------------RITMQHLKTAIRHV---------QPSEIH 1023
             REA ISA+ E +  +                IT +H + A+  V         + +E H
Sbjct: 669  VREAKISAMREFIAMTAKKSEEERRQAVGNVMITKKHFEDALSRVRGTLDLDRLEEAERH 728

Query: 1024 SYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMWTLIKSIS 1067
            S++ L  + QR    +A +  +  ++R +  I   +  LI+++ 
Sbjct: 729  SWQVLYNQEQRSTLEDAVSTINRARMRETGKIEQEVKDLIQTLK 772



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/297 (42%), Positives = 181/297 (60%), Gaps = 20/297 (6%)

Query: 739  KGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGG-QREVKTQLMEAVEWPQKH 797
            KG A+  +  + E       P   R     V  V +ED+GG  RE++  + E +E P +H
Sbjct: 149  KGIAIVTDSTEIELKETPYEPEKGRREA--VTDVHYEDIGGLDRELQL-VREMIELPLRH 205

Query: 798  QEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 857
             E F+R+G  PP G+L++GPPG  KTL+A+AVA+E   +F+ + GPE+ SK+ GESE+ +
Sbjct: 206  PELFERLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFVTLSGPEIMSKYYGESEERL 265

Query: 858  RSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVI 917
            R +F +A+ NAPSIIF DEID +A  R +E  G  V  RV++QLL  +DGL  R  V VI
Sbjct: 266  REVFEEAQENAPSIIFIDEIDSIAPKR-EEVKG-EVERRVVAQLLALMDGLKTRGQVVVI 323

Query: 918  AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            AATN PD IDPAL R GRFDR + +G P+   R++IF+IH R +P + DVN+ + A  + 
Sbjct: 324  AATNLPDIIDPALRRGGRFDREIEIGIPDTKGRQQIFQIHTRGMPLAEDVNLDDYARSTH 383

Query: 978  GCTGADISLICREAAISAIEENL--------------DASRITMQHLKTAIRHVQPS 1020
            G  GADI+L+ +EAA+ A+   +              D  R+T +    A +HV+PS
Sbjct: 384  GFVGADIALLAKEAAMHALRRIIPHIKIEEEIPTEIIDQLRVTNEDFLEAHKHVEPS 440



 Score =  196 bits (498), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 153/245 (62%), Gaps = 16/245 (6%)

Query: 403 QATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           +A  +     +GGL +E  +++++I +          LG+ P KGVLL+GPPGTGKT +A
Sbjct: 175 EAVTDVHYEDIGGLDRELQLVREMIELPLRHPELFERLGIEPPKGVLLYGPPGTGKTLIA 234

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
           +  A++   +  T++GPE++S+ YGESE+ L EVF+ A ++AP+++FIDE+D+IAP R++
Sbjct: 235 KAVANEVDAHFVTLSGPEIMSKYYGESEERLREVFEEAQENAPSIIFIDEIDSIAPKREE 294

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
              E+ +R+VA LL LMDG+     V+VIAATN PD I+PALRR GR DREIEI      
Sbjct: 295 VKGEVERRVVAQLLALMDGLKTRGQVVVIAATNLPDIIDPALRRGGRFDREIEI------ 348

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
                    +P    R +I      GM  +  D  ++  + +THGFVGAD+A L  EAA+
Sbjct: 349 --------GIPDTKGRQQIFQIHTRGMPLA-EDVNLDDYARSTHGFVGADIALLAKEAAM 399

Query: 642 VCLRR 646
             LRR
Sbjct: 400 HALRR 404



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 125/216 (57%), Gaps = 20/216 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             +L   P +G+LL GPPGTGKT LA+  A++S  N  +V GPE++S+  GESE+ + +V
Sbjct: 481 FDALETEPPRGILLFGPPGTGKTLLAKAVANESESNFISVKGPELLSKWVGESERGVRQV 540

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q+AP+++F DE+DA+ P R    G   +++ +V+ +L  +DG+   + V+V+ AT
Sbjct: 541 FRKARQAAPSIIFFDEIDALMPKRGAYIGSSHVTESVVSQILTELDGLEELNNVVVLGAT 600

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHS 611
           NRPD ++ AL RPGRLDR I                 VP P +  R +I    L   E  
Sbjct: 601 NRPDMLDEALLRPGRLDRMI----------------YVPPPDREGRKKIFEVYLRNREIL 644

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
             D +++ L   T G+VGAD+ AL  EA +  +R +
Sbjct: 645 ANDVDIDELVERTEGYVGADIEALVREAKISAMREF 680


>gi|333988034|ref|YP_004520641.1| AAA family ATPase [Methanobacterium sp. SWAN-1]
 gi|333826178|gb|AEG18840.1| AAA family ATPase, CDC48 subfamily [Methanobacterium sp. SWAN-1]
          Length = 761

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 137/300 (45%), Positives = 204/300 (68%), Gaps = 4/300 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A   + PSA+REV +E+P + W+D+GG  E+K  L EAVEWP  H +AFKRIG  P
Sbjct: 456  DFMDALKFINPSALREVFIEIPNIHWKDIGGLNELKQSLKEAVEWPLNHPDAFKRIGIEP 515

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+FGPPG  KT++++AVA+E+  NF++VKG E+ SKW GESE+ +  +F KA+  +
Sbjct: 516  PKGILLFGPPGTGKTMLSKAVATESRANFISVKGSEILSKWFGESERKISEIFNKAKQAS 575

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P I+FFDE+D LA++RG  +    V +R+++ LL E+DGL +   V V+ ATNRPD +D 
Sbjct: 576  PCIVFFDELDALASMRGSGAGEPRVVERMVNTLLSEMDGLEELKGVVVLGATNRPDLLDS 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD ++ V PP+E  R EIFR+H+  +    DV+I +LA  ++G +GADI+ +C
Sbjct: 636  ALLRPGRFDEIVLVPPPDEKSRIEIFRVHMEGMSLDDDVDIEKLAKKTDGYSGADIAAVC 695

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHSNAEADE 1044
            R+A + A+ +N++   ++ +H K A++ + PS     I  YK L+ + +R +    E +E
Sbjct: 696  RKAGMLALHDNIEIKSVSPKHFKKALKKIGPSLTSEVIKYYKHLTKELERGIEVRNEREE 755



 Score =  232 bits (591), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 118/284 (41%), Positives = 179/284 (63%), Gaps = 17/284 (5%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            +++RP A+  +  ++P V ++DVGG +   ++L E VE P +H E F R+G  PP G+L+
Sbjct: 189  IEIRPEAVELIEKKIPDVTYDDVGGLKPEISKLREMVELPLRHPEIFDRLGIDPPKGVLL 248

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
             G PG  KTL+A+A+A+E+  NF+A+ GPE+ SK+VGE+EK +R  F +A   APSIIF 
Sbjct: 249  HGSPGTGKTLIAKALANESDANFMAINGPEIMSKFVGEAEKRIRDFFKQAEDEAPSIIFI 308

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV++Q+L  +DGL +R  V V+ ATNRPD +DPAL RPG
Sbjct: 309  DEIDAIAP-RREEVTG-EVERRVVAQILSLMDGLKERGKVIVVGATNRPDALDPALRRPG 366

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + +  P++  R EI +IH R +P + DV + E + ++ G  GAD++ +CREAA++
Sbjct: 367  RFDREIGLRVPDKDGRCEILQIHTRGMPLADDVELNEFSSITHGFVGADLAALCREAAMN 426

Query: 995  AI---------------EENLDASRITMQHLKTAIRHVQPSEIH 1023
            A+               +E L+   +T      A++ + PS + 
Sbjct: 427  ALRRILPDIDLEEQTIPKEVLEKLFVTKNDFMDALKFINPSALR 470



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 106/235 (45%), Positives = 147/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E + L++++ +          LG+ P KGVLLHG PGTGKT +A+  A++S  N
Sbjct: 211 VGGLKPEISKLREMVELPLRHPEIFDRLGIDPPKGVLLHGSPGTGKTLIAKALANESDAN 270

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +NGPE++S+  GE+E+ + + F  A   AP+++FIDE+DAIAP R++   E+ +R+V
Sbjct: 271 FMAINGPEIMSKFVGEAEKRIRDFFKQAEDEAPSIIFIDEIDAIAPRREEVTGEVERRVV 330

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A +L+LMDG+     V+V+ ATNRPD+++PALRRPGR DREI +               V
Sbjct: 331 AQILSLMDGLKERGKVIVVGATNRPDALDPALRRPGRFDREIGL--------------RV 376

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  +  D E+   S  THGFVGADLAALC EAA+  LRR
Sbjct: 377 PDKDGRCEILQIHTRGMPLA-DDVELNEFSSITHGFVGADLAALCREAAMNALRR 430



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 135/224 (60%), Gaps = 23/224 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G+ P KG+LL GPPGTGKT L++  A +S  N  +V G E++S+ +GESE+ + E+
Sbjct: 508 FKRIGIEPPKGILLFGPPGTGKTMLSKAVATESRANFISVKGSEILSKWFGESERKISEI 567

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F+ A Q++P +VF DELDA+A  R  G  E  + +RMV TLL+ MDG+    GV+V+ AT
Sbjct: 568 FNKAKQASPCIVFFDELDALASMRGSGAGEPRVVERMVNTLLSEMDGLEELKGVVVLGAT 627

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHS 611
           NRPD ++ AL RPGR D  +                 VP P +  R+EI    + GM  S
Sbjct: 628 NRPDLLDSALLRPGRFDEIV----------------LVPPPDEKSRIEIFRVHMEGM--S 669

Query: 612 LLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSS 654
           L D  ++E L+  T G+ GAD+AA+C +A ++ L    +I++ S
Sbjct: 670 LDDDVDIEKLAKKTDGYSGADIAAVCRKAGMLALHDNIEIKSVS 713


>gi|241959264|ref|XP_002422351.1| ATPase of the CDC48/PAS1/SEC18 (AAA) family, putative [Candida
            dubliniensis CD36]
 gi|223645696|emb|CAX40357.1| ATPase of the CDC48/PAS1/SEC18 (AAA) family, putative [Candida
            dubliniensis CD36]
          Length = 769

 Score =  297 bits (760), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 141/297 (47%), Positives = 211/297 (71%), Gaps = 8/297 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            A+K+ + D   A  ++RPSAMRE+ LE+PKV W D+GGQ E+K +L+E V+ P +  ++F
Sbjct: 469  AIKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQDELKRKLIEVVQLPLEASDSF 528

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            K +G   P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+F+K+VGESE+ +R +F
Sbjct: 529  KNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERTIREIF 588

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KARA +PSIIFFDEID +A  R  +S   + S+ V++ LL E+DG+ +   V ++ ATN
Sbjct: 589  RKARAASPSIIFFDEIDAIAGDRDGDSSTTAASN-VLTSLLNEIDGVEELKGVVIVGATN 647

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS---DVNIRELACLSEG 978
            +P +IDPALLRPGR DR +YV PP+   R +I +   RK    S    V++++LA L++G
Sbjct: 648  KPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCCRKFNLHSGDKSVDLQKLAELTDG 707

Query: 979  CTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            C+GA+++L+C+EA ++AI EN +A+ +T +H + A+    R + P  +  Y+  S K
Sbjct: 708  CSGAEVTLLCQEAGLAAIMENKEATTVTSKHFEHALKGISRGITPEMLEYYEMFSKK 764



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/278 (37%), Positives = 164/278 (58%), Gaps = 24/278 (8%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVK 433
           YL+ P  A + ++   T P  + ++ N+   +  D  ++GGLSK+  +LK  I +  +  
Sbjct: 200 YLFSP-TATTVNVASVTFP-LRSKYPNLPQQITYD--QVGGLSKQIELLKSTIELPLNNP 255

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD-SGVNLFTVNGPEVVSQNYGESEQAL 492
           +  S  G+ P +G+LLHGPPGTGKT L R  A+  +  ++ T+NGP +VS+  GE+E A+
Sbjct: 256 TLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKYLGETENAI 315

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            ++F+ A +  P++VF+DE+D+IAP+R  D   E   R+VA LL +MDG+     ++V+ 
Sbjct: 316 RDIFNEAKKFQPSIVFMDEIDSIAPSRTSDDAGETESRVVAQLLTVMDGMGDNGRIVVVG 375

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--- 608
           ATNRP+SI+ ALRRPGR D+E+EI               +P    R EIL    + M   
Sbjct: 376 ATNRPNSIDSALRRPGRFDQEVEI--------------GIPDVEAREEILTKQFARMNPE 421

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +  +   E+  ++  THG+VGADL ALC E+ +  + R
Sbjct: 422 KCQITKEEIANIASKTHGYVGADLTALCRESVMKAINR 459



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 148/264 (56%), Gaps = 12/264 (4%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++ VGG  +    L   +E P  +   F   G  PP GIL+ GPPG  KT++ R VA
Sbjct: 228  QITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVA 287

Query: 831  -SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
             S    + L + GP + SK++GE+E A+R +F +A+   PSI+F DEID +A  R  +  
Sbjct: 288  NSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIVFMDEIDSIAPSRTSDDA 347

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G + S RV++QLL  +DG+     + V+ ATNRP+ ID AL RPGRFD+ + +G P+   
Sbjct: 348  GETES-RVVAQLLTVMDGMGDNGRIVVVGATNRPNSIDSALRRPGRFDQEVEIGIPDVEA 406

Query: 950  REEIFRIHLRKI-PCSSDVNIRELACL---SEGCTGADISLICREAAISAIEENLD---- 1001
            REEI      ++ P    +   E+A +   + G  GAD++ +CRE+ + AI   L     
Sbjct: 407  REEILTKQFARMNPEKCQITKEEIANIASKTHGYVGADLTALCRESVMKAINRGLSVGIP 466

Query: 1002 --ASRITMQHLKTAIRHVQPSEIH 1023
              A ++T+  +  A+  ++PS + 
Sbjct: 467  QTAIKVTVDDVYHALPEIRPSAMR 490



 Score =  143 bits (360), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 117/213 (54%), Gaps = 17/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           +  +LG+   KGVLL+GPPG  KT  A+  A +SG+N   V GPE+ ++  GESE+ + E
Sbjct: 527 SFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERTIRE 586

Query: 495 VFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           +F  A  ++P+++F DE+DAIA  R  D     +  ++ +LLN +DGV    GV+++ AT
Sbjct: 587 IFRKARAASPSIIFFDEIDAIAGDRDGDSSTTAASNVLTSLLNEIDGVEELKGVVIVGAT 646

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           N+P  I+PAL RPGRLDR I +              A P    RL+IL            
Sbjct: 647 NKPTEIDPALLRPGRLDRHIYV--------------APPDYDARLQILQKCCRKFNLHSG 692

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCL 644
           D  V+   +A  T G  GA++  LC EA L  +
Sbjct: 693 DKSVDLQKLAELTDGCSGAEVTLLCQEAGLAAI 725


>gi|118352130|ref|XP_001009338.1| ATPase, AAA family protein [Tetrahymena thermophila]
 gi|89291105|gb|EAR89093.1| ATPase, AAA family protein [Tetrahymena thermophila SB210]
          Length = 669

 Score =  296 bits (759), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 137/273 (50%), Positives = 198/273 (72%), Gaps = 6/273 (2%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            FE A   V  S ++++++E+PKV W D+GG  EVK Q+ + +EWP KH +AFKR+G +P 
Sbjct: 387  FENALQNVHASGVKDILMEIPKVYWRDIGGYLEVKDQIKQVIEWPLKHPDAFKRMGIQPS 446

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             GIL++GPPGCSKT++A+A+A+E+ LNFLAVKGPELFSK+VG+SEKA+R +F +AR  AP
Sbjct: 447  KGILLYGPPGCSKTMIAKAIATESKLNFLAVKGPELFSKYVGDSEKAIREVFRRARLCAP 506

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
            S+IFFDEID +A  R   +D   VS+RV+ Q+L E+DG     NV ++AATNRP+ ID A
Sbjct: 507  SVIFFDEIDAIATQRSVNTD---VSERVLIQMLTEMDGFEGLKNVVIVAATNRPEIIDKA 563

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHL--RKIPCSS-DVNIRELACLSEGCTGADISL 986
            L RPGRFD L+YV PP+   R EI +I++   K+P    D++I EL+ +++G +GA+I+L
Sbjct: 564  LTRPGRFDHLIYVPPPDIDCRREILKINILGNKMPVKEGDLDIEELSKMTDGYSGAEITL 623

Query: 987  ICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            I REA + A+  ++  +++T +    AI  V+P
Sbjct: 624  IVREAGLHALTRDIYQAQVTKEDFINAISKVKP 656



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 127/230 (55%), Gaps = 23/230 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G++P+KG+LL+GPPG  KT +A+  A +S +N   V GPE+ S+  G+SE+A+ EV
Sbjct: 438 FKRMGIQPSKGILLYGPPGCSKTMIAKAIATESKLNFLAVKGPELFSKYVGDSEKAIREV 497

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A   AP+V+F DE+DAIA  R     ++S+R++  +L  MDG      V+++AATNR
Sbjct: 498 FRRARLCAPSVIFFDEIDAIATQR-SVNTDVSERVLIQMLTEMDGFEGLKNVVIVAATNR 556

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLL 613
           P+ I+ AL RPGR D  I                 VP P    R EIL   + G +  + 
Sbjct: 557 PEIIDKALTRPGRFDHLI----------------YVPPPDIDCRREILKINILGNKMPVK 600

Query: 614 --DSEVEYLSMATHGFVGADLAALCNEAALVCLRR--YSKIQTSSDVLHS 659
             D ++E LS  T G+ GA++  +  EA L  L R  Y    T  D +++
Sbjct: 601 EGDLDIEELSKMTDGYSGAEITLIVREAGLHALTRDIYQAQVTKEDFINA 650



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 24/241 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD-SGV 470
           L G+SK+   L++ + +S         LG  P KG+LL GP GTGKT + +  +   + V
Sbjct: 162 LAGVSKQQEELENYLKLSLFQYEGFKDLGFSPVKGILLSGPSGTGKTQMIKKMSQKMNEV 221

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSA-PAVVFIDELDAIAPARKDGGEELSQR 529
               V   + +S+  GE E+ + + F+ + +S  P V+F D++  I      G       
Sbjct: 222 KFVLVETKQFLSRLVGEGEKKVEQYFNLSKRSGEPTVLFFDDIHIICDKSNKG------- 274

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+TL+N +D + +TD V+V+ AT++   I+  L+R GRLD+EI  +             
Sbjct: 275 LVSTLINEIDKLKQTDRVVVVCATSQIKKIDENLKRAGRLDKEINFE------------- 321

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
            VP   +R +IL+  L   +H+L   ++  +++  +GF GAD+ +L  E  L  ++   +
Sbjct: 322 -VPKVQERCDILNCYLERTKHNLNQDDILEINLQMNGFTGADVVSLLRETLLERVKEQKE 380

Query: 650 I 650
           I
Sbjct: 381 I 381



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 14/225 (6%)

Query: 799  EAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAG-LNFLAVKGPELFSKWVGESEKAV 857
            E FK +G  P  GIL+ GP G  KT M + ++ +   + F+ V+  +  S+ VGE EK V
Sbjct: 184  EGFKDLGFSPVKGILLSGPSGTGKTQMIKKMSQKMNEVKFVLVETKQFLSRLVGEGEKKV 243

Query: 858  RSLF-AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
               F    R+  P+++FFD+I     I  K + G+      +S L+ E+D L Q   V V
Sbjct: 244  EQYFNLSKRSGEPTVLFFDDIH---IICDKSNKGL------VSTLINEIDKLKQTDRVVV 294

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACL 975
            + AT++  KID  L R GR D+ +    P   +R +I   +L +   + +  +I E+   
Sbjct: 295  VCATSQIKKIDENLKRAGRLDKEINFEVPKVQERCDILNCYLERTKHNLNQDDILEINLQ 354

Query: 976  SEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
              G TGAD+  + RE  +  ++E  +   I   H + A+++V  S
Sbjct: 355  MNGFTGADVVSLLRETLLERVKEQKEI--IEKNHFENALQNVHAS 397


>gi|378732487|gb|EHY58946.1| vesicle-fusing ATPase [Exophiala dermatitidis NIH/UT8656]
          Length = 752

 Score =  296 bits (758), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 219/629 (34%), Positives = 311/629 (49%), Gaps = 105/629 (16%)

Query: 396  QIEFQNVQATVEQDISKLGGLSKEYAILKDII--ISSSVKSTLSSLGLRPTKGVLLHGPP 453
            Q+EFQ V          LGG+      ++DII  I   V      L  RP +GVLL+G  
Sbjct: 195  QVEFQPV---------SLGGVHDAIRQVQDIIGRICRPVVKRHFRL-YRPVQGVLLYGSK 244

Query: 454  GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
            GTGKT+        +G    T   P    +    SE  L             VV    L 
Sbjct: 245  GTGKTAFISALGQ-AGWTAVTEWKPGTQLKGTNGSEPQL------------VVVPTRYL- 290

Query: 514  AIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREI 573
                +RKD     S  +V   L+ +    R   VLV+     P+ +E ALR  G+   EI
Sbjct: 291  ----SRKDSNGGSSSSVVVGELDKLFEQVRDFPVLVVGEVRHPNDVEQALRSEGKFAAEI 346

Query: 574  EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
            E+               +PS  QR EIL AL  G +    D+ V+ ++  THG+VGADL 
Sbjct: 347  EL--------------PIPSAQQRKEILLALRGG-DSVPDDALVQEMADRTHGYVGADLY 391

Query: 634  ALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNIT-ESSRDCLD 692
            AL      +   R   + +  + + S G      G +   +   +   ++T   + D  +
Sbjct: 392  ALVRRTLEIASDRSESVPSVPNNIRSLG------GENQKQINGIEDMASLTLNENEDTAN 445

Query: 693  SASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEK 752
            ++S  T D+  +L  +S                                       D ++
Sbjct: 446  ASSTQTEDVQLALRPTS--------------------------------------TDLDE 467

Query: 753  ARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGI 812
            A  ++RPSA++E+ LE P V W D+GG  E+K QL  AVE P K      ++G +P  G+
Sbjct: 468  ALRQIRPSALQEIFLETPNVHWTDIGGNHEIKRQLRNAVERPLKFSSRMAKLGLQPKKGV 527

Query: 813  LMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSII 872
            L++GPPGCSKTL+ RA+A+EAGLNFLAVKG EL S +VGESE+A R +F KARA +PSII
Sbjct: 528  LLYGPPGCSKTLLVRALATEAGLNFLAVKGAELISMYVGESERATREVFRKARAASPSII 587

Query: 873  FFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALL 931
            FFDEID +A      S G S SD  V++ LL E+DG  +  NV V+AATN+P  IDPAL+
Sbjct: 588  FFDEIDAIA------SRGRSGSDLNVLTTLLNEMDGFEELKNVLVVAATNKPMNIDPALM 641

Query: 932  RPGRFDRLLYVGPPNETDREEIFRIHLRKI------PCSSDVNIRELACLSEGCTGADIS 985
            RPGRFD ++Y+GPP+   R+EIF+  L++I        S D +  E A  + G +GA++ 
Sbjct: 642  RPGRFDNVVYIGPPDLEARKEIFQKRLQRIGDGYRPEISLDEDTDEFARAAAGFSGAEVV 701

Query: 986  LICREAAISAIEENLDASRITMQHLKTAI 1014
             IC+ A   A +++ D   I  + ++ AI
Sbjct: 702  AICQTAGEFAFDDDRDV--IVAEDIRRAI 728



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 130/248 (52%), Gaps = 31/248 (12%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           S ++ LGL+P KGVLL+GPPG  KT L R  A ++G+N   V G E++S   GESE+A  
Sbjct: 514 SRMAKLGLQPKKGVLLYGPPGCSKTLLVRALATEAGLNFLAVKGAELISMYVGESERATR 573

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           EVF  A  ++P+++F DE+DAIA +R   G +L+  ++ TLLN MDG      VLV+AAT
Sbjct: 574 EVFRKARAASPSIIFFDEIDAIA-SRGRSGSDLN--VLTTLLNEMDGFEELKNVLVVAAT 630

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL- 612
           N+P +I+PAL RPGR D  + I                P    R EI    L  +     
Sbjct: 631 NKPMNIDPALMRPGRFDNVVYI--------------GPPDLEARKEIFQKRLQRIGDGYR 676

Query: 613 ----LDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDV---LHST----- 660
               LD + +  + A  GF GA++ A+C  A          +  + D+   + ST     
Sbjct: 677 PEISLDEDTDEFARAAAGFSGAEVVAICQTAGEFAFDDDRDVIVAEDIRRAIESTPKSIT 736

Query: 661 -GTLFEFE 667
              LFEFE
Sbjct: 737 ADMLFEFE 744


>gi|255714124|ref|XP_002553344.1| KLTH0D14586p [Lachancea thermotolerans]
 gi|238934724|emb|CAR22906.1| KLTH0D14586p [Lachancea thermotolerans CBS 6340]
          Length = 774

 Score =  296 bits (757), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 145/297 (48%), Positives = 206/297 (69%), Gaps = 12/297 (4%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ + D E A  ++RPSAMRE+ LE+PKV W D+GGQ ++K ++ E ++ P +  E+F 
Sbjct: 477  MKITMRDVEDAMAEIRPSAMREIFLEMPKVYWSDIGGQEDLKLKMKEMIQLPLEAPESFS 536

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+    P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F 
Sbjct: 537  RLSVSAPKGVLLYGPPGCSKTLTAKALATESGVNFLAVKGPEIFNKYVGESERAIREVFR 596

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDG-VSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            KARA APSIIFFDEID L+  R  +S G  S ++ V++ LL E+DG+ +   V ++AATN
Sbjct: 597  KARAAAPSIIFFDEIDALSPDR--DSGGSTSAANHVLTSLLNEIDGVEELNGVVIVAATN 654

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFR-----IHLRKIPCSSDVNIRELACLS 976
            RPD+ID ALLRPGR DR +YVGPP+   R +I R      HL      SD  ++E A  +
Sbjct: 655  RPDEIDAALLRPGRLDRHIYVGPPDFEARLQILRKSTKDFHL----IDSDALLQEFAQKT 710

Query: 977  EGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 1033
            EGC+GA++ L+C+EA ++AI ENLDA ++  +H   AI  +         E  A+FQ
Sbjct: 711  EGCSGAEVVLLCQEAGLAAIMENLDAEKVDRKHFDKAIAGISRGIDKEMLEYYAEFQ 767



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/239 (43%), Positives = 151/239 (63%), Gaps = 19/239 (7%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE  +LK  I     + TL +  G+ P +G+LLHGPPGTGKT L R  A ++  +
Sbjct: 242 VGGLQKEIELLKRTIELPLHQPTLFADFGVTPPRGILLHGPPGTGKTMLLRCVASEANAH 301

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
           + T+NGP +VS+  GE+E AL ++F+ A    P+++FIDE+D++AP+R  D   E+  R+
Sbjct: 302 VLTINGPSIVSKYLGETEAALRDIFNEARIYQPSIIFIDEIDSLAPSRTSDDSGEVESRV 361

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           VATLL LMDG+  T  V+V+AATNRP++++ ALRRPGRLD+E+EI               
Sbjct: 362 VATLLTLMDGMGSTGRVVVVAATNRPNAVDMALRRPGRLDQEVEI--------------G 407

Query: 591 VPSPAQRLEIL---HALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +P    R +IL      +S   H L   +++ ++  THG+VGADL ALC EA +  L+R
Sbjct: 408 IPDVESRHDILLKQFRKVSEKRHELTLEDIQAIASKTHGYVGADLVALCREAVMKTLQR 466



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 166/313 (53%), Gaps = 28/313 (8%)

Query: 774  WEDVGG-QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASE 832
            +  VGG Q+E++  L   +E P      F   G  PP GIL+ GPPG  KT++ R VASE
Sbjct: 239  YNSVGGLQKEIEL-LKRTIELPLHQPTLFADFGVTPPRGILLHGPPGTGKTMLLRCVASE 297

Query: 833  AGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS 892
            A  + L + GP + SK++GE+E A+R +F +AR   PSIIF DEID LA  R  +  G  
Sbjct: 298  ANAHVLTINGPSIVSKYLGETEAALRDIFNEARIYQPSIIFIDEIDSLAPSRTSDDSG-E 356

Query: 893  VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
            V  RV++ LL  +DG+     V V+AATNRP+ +D AL RPGR D+ + +G P+   R +
Sbjct: 357  VESRVVATLLTLMDGMGSTGRVVVVAATNRPNAVDMALRRPGRLDQEVEIGIPDVESRHD 416

Query: 953  IFRIHLRKIPCSSD----VNIRELACLSEGCTGADISLICREAAISAIEENL------DA 1002
            I     RK+          +I+ +A  + G  GAD+  +CREA +  ++  +      D 
Sbjct: 417  ILLKQFRKVSEKRHELTLEDIQAIASKTHGYVGADLVALCREAVMKTLQRGVSHSLTKDE 476

Query: 1003 SRITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESGY 1047
             +ITM+ ++ A+  ++P               S+I   ++L  K + ++    EA ES  
Sbjct: 477  MKITMRDVEDAMAEIRPSAMREIFLEMPKVYWSDIGGQEDLKLKMKEMIQLPLEAPESFS 536

Query: 1048 QLRPSKSIGSNMW 1060
            +L  S   G  ++
Sbjct: 537  RLSVSAPKGVLLY 549



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/238 (39%), Positives = 134/238 (56%), Gaps = 20/238 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG       +K++I +      + S L +   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 509 SDIGGQEDLKLKMKEMIQLPLEAPESFSRLSVSAPKGVLLYGPPGCSKTLTAKALATESG 568

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           VN   V GPE+ ++  GESE+A+ EVF  A  +AP+++F DE+DA++P R  GG   +  
Sbjct: 569 VNFLAVKGPEIFNKYVGESERAIREVFRKARAAAPSIIFFDEIDALSPDRDSGGSTSAAN 628

Query: 530 MVAT-LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            V T LLN +DGV   +GV+++AATNRPD I+ AL RPGRLDR I +             
Sbjct: 629 HVLTSLLNEIDGVEELNGVVIVAATNRPDEIDAALLRPGRLDRHIYV------------- 675

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSE--VEYLSMATHGFVGADLAALCNEAALVCL 644
              P    RL+IL    S  +  L+DS+  ++  +  T G  GA++  LC EA L  +
Sbjct: 676 -GPPDFEARLQILRK--STKDFHLIDSDALLQEFAQKTEGCSGAEVVLLCQEAGLAAI 730


>gi|126179507|ref|YP_001047472.1| ATPase AAA [Methanoculleus marisnigri JR1]
 gi|125862301|gb|ABN57490.1| AAA family ATPase, CDC48 subfamily [Methanoculleus marisnigri JR1]
          Length = 808

 Score =  296 bits (757), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 158/312 (50%), Positives = 203/312 (65%), Gaps = 27/312 (8%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   V PSAMREV++E+P VKWEDVGG  +VK +L EAVEWP K+ E F  + T P
Sbjct: 430  DFIEAHKHVEPSAMREVLVEIPDVKWEDVGGLEDVKGELAEAVEWPLKYPEIFASLETEP 489

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+FGPPG  KTL+A+AVA+E+  NF++VKGPEL SKWVGESE+ VR +F KAR  A
Sbjct: 490  PRGILLFGPPGTGKTLLAKAVANESESNFISVKGPELLSKWVGESERGVRQVFRKARQAA 549

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSIIFFDEID L   RG       V++ V+SQ+L ELDGL +  NV V+ ATNRPD +D 
Sbjct: 550  PSIIFFDEIDALMPKRGSYIGSSHVTESVVSQILTELDGLEELNNVVVLGATNRPDMLDE 609

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHL--RKIPCSSDVNIRELACLSEGCTGADISL 986
            ALLRPGRFDR++YV PP+   R++IF ++L  R+I  ++DV+I EL   +EG  GADI  
Sbjct: 610  ALLRPGRFDRIIYVPPPDREGRKKIFEVYLKNREI-LANDVDIEELVDRTEGYVGADIEA 668

Query: 987  ICREAAISAIEENLDAS---------------RITMQHLKTAIRHV---------QPSEI 1022
            + REA  SA+ E + A                RIT  H   A+  V         + +E 
Sbjct: 669  LVREAKTSAMREFIAAMGGKTEEERRQAIGNVRITKNHFDDALSRVRGTLDIDRLEENER 728

Query: 1023 HSYKELSAKFQR 1034
            HS++ L  + QR
Sbjct: 729  HSWQILYNQEQR 740



 Score =  226 bits (575), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 170/264 (64%), Gaps = 18/264 (6%)

Query: 772  VKWEDVGG-QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            V +ED+GG  RE++  + E +E P +H E F+R+G  PP G+L++GPPG  KTL+A+AVA
Sbjct: 181  VHYEDIGGLDRELQL-VREMIELPLRHPELFERLGVEPPKGVLLYGPPGTGKTLIAKAVA 239

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE   +F+ + GPE+ SK+ GESE+ +R +F +A+ NAPSI+F DEID +A  R +E  G
Sbjct: 240  SEVDAHFITLSGPEIMSKYYGESEERLREVFEEAQENAPSIVFIDEIDSIAPKR-EEVKG 298

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R+++QLL  +DGL  R  V VIAATN PD IDPAL R GRFDR + +G P+   R
Sbjct: 299  -EVERRIVAQLLALMDGLKTRGQVVVIAATNLPDMIDPALRRGGRFDREIEIGIPDTKGR 357

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL---------- 1000
            ++IF+IH R +P + DV + + A  + G  GADI+L+ +EAA+ A+   +          
Sbjct: 358  QQIFQIHTRGMPLAEDVRLDDYARSTHGFVGADIALLAKEAAMHALRRIIPHIKIEEEIP 417

Query: 1001 ----DASRITMQHLKTAIRHVQPS 1020
                D  R+T +    A +HV+PS
Sbjct: 418  AEIIDQLRVTNEDFIEAHKHVEPS 441



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 105/235 (44%), Positives = 149/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGVLL+GPPGTGKT +A+  A +   +
Sbjct: 186 IGGLDRELQLVREMIELPLRHPELFERLGVEPPKGVLLYGPPGTGKTLIAKAVASEVDAH 245

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++AP++VFIDE+D+IAP R++   E+ +R+V
Sbjct: 246 FITLSGPEIMSKYYGESEERLREVFEEAQENAPSIVFIDEIDSIAPKREEVKGEVERRIV 305

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATN PD I+PALRR GR DREIEI               +
Sbjct: 306 AQLLALMDGLKTRGQVVVIAATNLPDMIDPALRRGGRFDREIEI--------------GI 351

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R +I      GM  +  D  ++  + +THGFVGAD+A L  EAA+  LRR
Sbjct: 352 PDTKGRQQIFQIHTRGMPLA-EDVRLDDYARSTHGFVGADIALLAKEAAMHALRR 405



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 124/216 (57%), Gaps = 20/216 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            +SL   P +G+LL GPPGTGKT LA+  A++S  N  +V GPE++S+  GESE+ + +V
Sbjct: 482 FASLETEPPRGILLFGPPGTGKTLLAKAVANESESNFISVKGPELLSKWVGESERGVRQV 541

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q+AP+++F DE+DA+ P R    G   +++ +V+ +L  +DG+   + V+V+ AT
Sbjct: 542 FRKARQAAPSIIFFDEIDALMPKRGSYIGSSHVTESVVSQILTELDGLEELNNVVVLGAT 601

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHS 611
           NRPD ++ AL RPGR DR I                 VP P +  R +I    L   E  
Sbjct: 602 NRPDMLDEALLRPGRFDRII----------------YVPPPDREGRKKIFEVYLKNREIL 645

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
             D ++E L   T G+VGAD+ AL  EA    +R +
Sbjct: 646 ANDVDIEELVDRTEGYVGADIEALVREAKTSAMREF 681


>gi|395325487|gb|EJF57909.1| AAA family ATPase [Dichomitus squalens LYAD-421 SS1]
          Length = 796

 Score =  296 bits (757), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 140/286 (48%), Positives = 200/286 (69%), Gaps = 4/286 (1%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            +L + D   A   VRPSA+R + L+   V++ D+GGQ +   +L E VEWP  H EAF R
Sbjct: 499  QLAVTDLLIALPSVRPSALRSLFLDTVPVRYSDIGGQAQTIQKLRECVEWPLLHPEAFAR 558

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G R P G+L++GPPGCSKTL+ RA A+E+G+NFLAVKGPEL +K+VGESE+AVR +F K
Sbjct: 559  LGVRAPRGVLLYGPPGCSKTLLVRACATESGVNFLAVKGPELLNKYVGESERAVRDIFRK 618

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            ARA APS+IFFDEID LAA R          + V++ LL E+DG+ + V VT++AATNRP
Sbjct: 619  ARAAAPSLIFFDEIDALAASRSVSDSSGGAHEGVLTSLLNEMDGVQELVGVTIVAATNRP 678

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            D ID AL+RPGR DR+LYVGPP+   R EI RI  +K+   +D+++R++A ++EGC+GA+
Sbjct: 679  DVIDAALMRPGRLDRVLYVGPPDLEGRVEILRIRTQKMRVEADLDLRQIAKMTEGCSGAE 738

Query: 984  ISLICREAAISAIEENLDASRITMQHLKTAIRHVQ----PSEIHSY 1025
            ++ +C+EAA+  ++ ++DA  +       A R+++    P  + SY
Sbjct: 739  MTALCQEAALLTMKADIDAPFVPQSAFLEAARNIKKQITPEVVRSY 784



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/262 (41%), Positives = 159/262 (60%), Gaps = 22/262 (8%)

Query: 402 VQATVEQD-ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTS 459
           V+  VE+D  S +GGL K+ A ++D+I I  +        GL+P +G+LLHGPPGTGKT 
Sbjct: 248 VERGVEKDAYSAVGGLDKQIAQIRDLIEIPLTRPELFRQFGLKPPRGILLHGPPGTGKTH 307

Query: 460 LARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR 519
           L+R  A  +G  +  VNGPE+ S  +GE+E  + +VF  A   +  +V +DE+DA+ P R
Sbjct: 308 LSRAIAASTGSAVLIVNGPELSSAYHGETEAKIRDVFAEARSHSSCIVVLDEVDALCPQR 367

Query: 520 KDG-GEELSQRMVATLLNLMDGVCR-TDG----VLVIAATNRPDSIEPALRRPGRLDREI 573
           +DG G E+ +R+VA LL LMDG+    DG    V+V+A TNRP++I+PALRRPGR DREI
Sbjct: 368 EDGPGGEVEKRVVAQLLTLMDGMDEGKDGSQGKVVVVATTNRPNAIDPALRRPGRFDREI 427

Query: 574 EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
           EI               +P    R  IL  LLS   H++ + ++  ++   HG+VGADL+
Sbjct: 428 EI--------------GIPDAEARFSILKVLLSKAPHAITEEDLRSVASKAHGYVGADLS 473

Query: 634 ALCNEAALVCLRRYSKIQTSSD 655
           A+  EA    ++R+   Q S+D
Sbjct: 474 AVVREAGTFAIKRWLASQPSAD 495



 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 163/287 (56%), Gaps = 14/287 (4%)

Query: 751  EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
            E++   +   +M  V   V K  +  VGG  +   Q+ + +E P    E F++ G +PP 
Sbjct: 234  EESHSGISKDSMNAVERGVEKDAYSAVGGLDKQIAQIRDLIEIPLTRPELFRQFGLKPPR 293

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            GIL+ GPPG  KT ++RA+A+  G   L V GPEL S + GE+E  +R +FA+AR+++  
Sbjct: 294  GILLHGPPGTGKTHLSRAIAASTGSAVLIVNGPELSSAYHGETEAKIRDVFAEARSHSSC 353

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ-----RVNVTVIAATNRPDK 925
            I+  DE+D L   R ++  G  V  RV++QLL  +DG+ +     +  V V+A TNRP+ 
Sbjct: 354  IVVLDEVDALCPQR-EDGPGGEVEKRVVAQLLTLMDGMDEGKDGSQGKVVVVATTNRPNA 412

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADI 984
            IDPAL RPGRFDR + +G P+   R  I ++ L K P + ++ ++R +A  + G  GAD+
Sbjct: 413  IDPALRRPGRFDREIEIGIPDAEARFSILKVLLSKAPHAITEEDLRSVASKAHGYVGADL 472

Query: 985  SLICREAAISAIEENLDAS-------RITMQHLKTAIRHVQPSEIHS 1024
            S + REA   AI+  L +        ++ +  L  A+  V+PS + S
Sbjct: 473  SAVVREAGTFAIKRWLASQPSADTTPQLAVTDLLIALPSVRPSALRS 519



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/244 (37%), Positives = 138/244 (56%), Gaps = 18/244 (7%)

Query: 405 TVEQDISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
           TV    S +GG ++    L++ +    +     + LG+R  +GVLL+GPPG  KT L R 
Sbjct: 524 TVPVRYSDIGGQAQTIQKLRECVEWPLLHPEAFARLGVRAPRGVLLYGPPGCSKTLLVRA 583

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KD 521
           CA +SGVN   V GPE++++  GESE+A+ ++F  A  +AP+++F DE+DA+A +R   D
Sbjct: 584 CATESGVNFLAVKGPELLNKYVGESERAVRDIFRKARAAAPSLIFFDEIDALAASRSVSD 643

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
                 + ++ +LLN MDGV    GV ++AATNRPD I+ AL RPGRLDR + +      
Sbjct: 644 SSGGAHEGVLTSLLNEMDGVQELVGVTIVAATNRPDVIDAALMRPGRLDRVLYV------ 697

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
                     P    R+EIL      M     D ++  ++  T G  GA++ ALC EAAL
Sbjct: 698 --------GPPDLEGRVEILRIRTQKMRVE-ADLDLRQIAKMTEGCSGAEMTALCQEAAL 748

Query: 642 VCLR 645
           + ++
Sbjct: 749 LTMK 752


>gi|403413059|emb|CCL99759.1| predicted protein [Fibroporia radiculosa]
          Length = 842

 Score =  295 bits (756), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 149/331 (45%), Positives = 207/331 (62%), Gaps = 31/331 (9%)

Query: 738  EKGCAL---KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWP 794
            E  C+L   +L L D   A   VRPSA+R + L+V  V W DVGGQ     +L E VEWP
Sbjct: 511  EAPCSLSEPQLTLTDLLSALPSVRPSALRSLFLDVVPVHWSDVGGQAVTIQKLRECVEWP 570

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESE 854
             +H E F R+G R P GIL++GPPGCSKTL+ RA A+E+G+NFLAVKGPEL +K+VGESE
Sbjct: 571  LRHPETFARLGVRAPKGILLYGPPGCSKTLLVRACATESGVNFLAVKGPELLNKYVGESE 630

Query: 855  KAVRSLFAKARANAPSIIFF-------------------------DEIDGLAAIRGKESD 889
            +AVR +F+KARA AP+IIFF                         DEID LA  R     
Sbjct: 631  RAVREIFSKARAAAPAIIFFVRLRSTPAWLVFASQDVIAEFHLPQDEIDALATARASSDS 690

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
                 + V++ LL E+DG+ + V VT++AATNRP+ ID AL+RPGR DR+LYVGPP+   
Sbjct: 691  STGAHEGVLTSLLNEMDGVEELVGVTIVAATNRPEAIDSALMRPGRLDRILYVGPPDAQG 750

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQH 1009
            RE+I RI  RK+  + D++  ELA ++EGC+GA+++ +C+EAA+  ++ N+DA  +    
Sbjct: 751  REDILRIRTRKMSIAPDLDYSELARMTEGCSGAEMAALCQEAALRTMKNNMDALHVPYDA 810

Query: 1010 LKTAIRHVQPSEIHSYKELSAKFQRLVHSNA 1040
               A R ++        ++ AK+++   SN+
Sbjct: 811  FVAAARTIKK---QITPDVVAKYEKWRDSNS 838



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 172/312 (55%), Gaps = 30/312 (9%)

Query: 345 DLTNERSQPQVTESMDHESNAF-VINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQ 403
           DL NE       +++  ES  F  ++ +T VY+    ++  KS     L  A   F    
Sbjct: 203 DLANE------FQALSLESPGFWTVDWDTTVYVESQNHSDDKSAAASKLAPAS-SFPAKD 255

Query: 404 ATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLAR 462
              E   + +GGL K+   ++D+I I  +        GL+P +GVLLHGPPGTGKT LAR
Sbjct: 256 GRNEDTYAAVGGLDKQIRQIRDLIEIPLARPELFRHFGLKPPRGVLLHGPPGTGKTHLAR 315

Query: 463 LCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG 522
             A  +   +  +NGPE+ S  +GE+E  L +VF  A   +P ++ +DE+DA+ P R+DG
Sbjct: 316 AIAASAHSAVLVINGPELSSAYHGETESKLRDVFAEARARSPCIIVLDEVDALCPRREDG 375

Query: 523 -GEELSQRMVATLLNLMDGVCRT------DGVLVIAATNRPDSIEPALRRPGRLDREIEI 575
            G E+ +R+VA LL +MDG+         + ++V+A TNRP++I+PALRRPGR DREIEI
Sbjct: 376 PGGEVEKRVVAQLLTIMDGMDSALENKSHERIVVVATTNRPNAIDPALRRPGRFDREIEI 435

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          +P    R  IL+ L++   H++   ++  ++   HG+VGADL+A+
Sbjct: 436 --------------GIPDAEARFSILNVLMAKAPHNIPQDDLRSVAARAHGYVGADLSAV 481

Query: 636 CNEAALVCLRRY 647
             EA    ++R+
Sbjct: 482 VREAGTAAIKRW 493



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/236 (40%), Positives = 140/236 (59%), Gaps = 12/236 (5%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 836
            VGG  +   Q+ + +E P    E F+  G +PP G+L+ GPPG  KT +ARA+A+ A   
Sbjct: 265  VGGLDKQIRQIRDLIEIPLARPELFRHFGLKPPRGVLLHGPPGTGKTHLARAIAASAHSA 324

Query: 837  FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR 896
             L + GPEL S + GE+E  +R +FA+ARA +P II  DE+D L   R ++  G  V  R
Sbjct: 325  VLVINGPELSSAYHGETESKLRDVFAEARARSPCIIVLDEVDALCP-RREDGPGGEVEKR 383

Query: 897  VMSQLLVELDGL--------HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
            V++QLL  +DG+        H+R  + V+A TNRP+ IDPAL RPGRFDR + +G P+  
Sbjct: 384  VVAQLLTIMDGMDSALENKSHER--IVVVATTNRPNAIDPALRRPGRFDREIEIGIPDAE 441

Query: 949  DREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS 1003
             R  I  + + K P +    ++R +A  + G  GAD+S + REA  +AI+  L +S
Sbjct: 442  ARFSILNVLMAKAPHNIPQDDLRSVAARAHGYVGADLSAVVREAGTAAIKRWLSSS 497



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/251 (37%), Positives = 131/251 (52%), Gaps = 48/251 (19%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T + LG+R  KG+LL+GPPG  KT L R CA +SGVN   V GPE++++  GESE+A+ E
Sbjct: 576 TFARLGVRAPKGILLYGPPGCSKTLLVRACATESGVNFLAVKGPELLNKYVGESERAVRE 635

Query: 495 VFDSASQSAPAVVFI-------------------------DELDAIAPAR--KDGGEELS 527
           +F  A  +APA++F                          DE+DA+A AR   D      
Sbjct: 636 IFSKARAAAPAIIFFVRLRSTPAWLVFASQDVIAEFHLPQDEIDALATARASSDSSTGAH 695

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           + ++ +LLN MDGV    GV ++AATNRP++I+ AL RPGRLDR           +L   
Sbjct: 696 EGVLTSLLNEMDGVEELVGVTIVAATNRPEAIDSALMRPGRLDR-----------ILYVG 744

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P   P    R +IL      M  +  D +   L+  T G  GA++AALC EAAL  ++  
Sbjct: 745 P---PDAQGREDILRIRTRKMSIA-PDLDYSELARMTEGCSGAEMAALCQEAALRTMK-- 798

Query: 648 SKIQTSSDVLH 658
                + D LH
Sbjct: 799 ----NNMDALH 805


>gi|432104089|gb|ELK30919.1| Spermatogenesis-associated protein 5 [Myotis davidii]
          Length = 759

 Score =  295 bits (756), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 135/247 (54%), Positives = 186/247 (75%)

Query: 737 SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
           S+    +K+ L DF +    VRPSAMREV ++VP V W D+GG   +K +L +AVEWP K
Sbjct: 499 SKVAALVKITLKDFLQGMNDVRPSAMREVAVDVPSVSWSDIGGLENIKLKLKQAVEWPLK 558

Query: 797 HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
           H E+F R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+A
Sbjct: 559 HPESFTRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERA 618

Query: 857 VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
           VR +F KA+A APSIIFFDE+D LA  RG  S   +V+DRV++QLL E+DG+ Q  +VTV
Sbjct: 619 VREIFRKAKAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTV 678

Query: 917 IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
           +AATNRPD+ID AL+RPGR DR++YV  P+   R+EIF +    +P S DV++ EL   +
Sbjct: 679 LAATNRPDRIDKALMRPGRIDRIVYVPLPDAATRKEIFNLQFHSMPISQDVDLNELILQT 738

Query: 977 EGCTGAD 983
           +  +GA+
Sbjct: 739 DTYSGAE 745



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 101/215 (46%), Positives = 141/215 (65%), Gaps = 17/215 (7%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+ P +GVLL+GPPGTGKT +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A
Sbjct: 293 GIPPPRGVLLYGPPGTGKTMIARAIANEVGAYVSVINGPEIISKFYGETEARLRQIFAEA 352

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRP 556
           +   P+++FIDELDA+ P R+    E+ +R+VA+LL LMDG+    ++G VLVI ATNRP
Sbjct: 353 TLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVIGATNRP 412

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
            +++ ALRRPGR D+EIEI               VP+   RL+IL  LL  + H L ++E
Sbjct: 413 HALDAALRRPGRFDKEIEI--------------GVPNAQDRLDILRKLLRKVPHELTEAE 458

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           +  L+   HG+VGADL ALCNE+ L   RR  K Q
Sbjct: 459 LLRLANNAHGYVGADLKALCNESGLNAFRRVLKKQ 493



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/235 (39%), Positives = 134/235 (57%), Gaps = 18/235 (7%)

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G  PP G+L++GPPG  KT++ARA+A+E G     + GPE+ SK+ GE+E  +R +FA+A
Sbjct: 293  GIPPPRGVLLYGPPGTGKTMIARAIANEVGAYVSVINGPEIISKFYGETEARLRQIFAEA 352

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN---VTVIAATN 921
                PSIIF DE+D L   R  E     V  RV++ LL  +DG+    +   V VI ATN
Sbjct: 353  TLRHPSIIFIDELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVIGATN 410

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCT 980
            RP  +D AL RPGRFD+ + +G PN  DR +I R  LRK+P   ++  +  LA  + G  
Sbjct: 411  RPHALDAALRRPGRFDKEIEIGVPNAQDRLDILRKLLRKVPHELTEAELLRLANNAHGYV 470

Query: 981  GADISLICREAAISAI------EENLDAS------RITMQHLKTAIRHVQPSEIH 1023
            GAD+  +C E+ ++A       + NL  S      +IT++     +  V+PS + 
Sbjct: 471  GADLKALCNESGLNAFRRVLKKQPNLPDSKVAALVKITLKDFLQGMNDVRPSAMR 525



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 118/199 (59%), Gaps = 17/199 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + + +G++P KGVLL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E
Sbjct: 562 SFTRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 621

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V V+AA
Sbjct: 622 IFRKAKAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTVLAA 681

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGR+DR + + +              P  A R EI +     M  S 
Sbjct: 682 TNRPDRIDKALMRPGRIDRIVYVPL--------------PDAATRKEIFNLQFHSMPIS- 726

Query: 613 LDSEVEYLSMATHGFVGAD 631
            D ++  L + T  + GA+
Sbjct: 727 QDVDLNELILQTDTYSGAE 745


>gi|353238883|emb|CCA70815.1| related to AFG2-ATPase of the CDC48/PAS1/SEC18 (AAA) family
            [Piriformospora indica DSM 11827]
          Length = 709

 Score =  295 bits (756), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 138/301 (45%), Positives = 204/301 (67%), Gaps = 4/301 (1%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            +   DF  A   +RPSA+R +I+E P+V W D+GG   ++ +L EA+EWP  H E F R+
Sbjct: 413  ITFADFLHALPSIRPSALRSLIVETPRVSWSDIGGVSHIRERLREAIEWPLLHPETFARL 472

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +P  G+L++GPPGCSKTL A+A+A+E+G+NFL+VKGPEL +K+VGESE+AVR +FAKA
Sbjct: 473  GVQPTKGLLLYGPPGCSKTLTAKALATESGINFLSVKGPELLNKYVGESERAVREVFAKA 532

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            RA AP IIFFDEID L   R  +       + V++ +L E+DG+ +   V V+AATNRPD
Sbjct: 533  RAGAPCIIFFDEIDALGTARNDDRTS-GAHEGVLTSMLNEMDGIQELQGVIVVAATNRPD 591

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
             +D AL+RPGR D++LYVGPP+   REEI RI  R +   + ++   LA ++EGC+GA++
Sbjct: 592  VMDSALMRPGRLDKILYVGPPDARGREEILRIRTRHMTIEAGIDFALLAQMTEGCSGAEL 651

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADE 1044
            + +C++AA  A+ E+++A  ++ QH + A +HV+       +E+   + R   SN   + 
Sbjct: 652  TAMCQDAATLAMREDVNAPYVSRQHFEKAAKHVRKG---ITREMVESYDRWRISNGLTNS 708

Query: 1045 S 1045
            S
Sbjct: 709  S 709



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/287 (40%), Positives = 164/287 (57%), Gaps = 47/287 (16%)

Query: 394 NAQIEFQNVQ-----ATVEQD-----ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLR 442
           + Q+EF + +       VE D        +GGLS + A+++D+I I  +     S   L+
Sbjct: 161 HCQVEFAHKKQRPEITMVEGDRNVSPYHNVGGLSTQIALIRDLIEIPLTRPHLFSHFNLK 220

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P KGVLLHGPPGTGKT LAR  A  +   +  VNGPE+ S  +GESEQ L EVF+ A +S
Sbjct: 221 PPKGVLLHGPPGTGKTHLARAIATSTNSRVLVVNGPEISSAYHGESEQRLREVFERAKRS 280

Query: 503 APAVVFIDELDAIAPARKDGGE--ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           +P +V +DE+DAI P R DGG+  E+ +R+VATLL L+DG+            +   + +
Sbjct: 281 SPCIVVLDEVDAICPKRDDGGDGNEVGKRVVATLLTLLDGM------------DDSTAQD 328

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
           PALRRPGR DRE+EI               +P    RL+IL  LL    H+L +S+++ +
Sbjct: 329 PALRRPGRFDREVEI--------------GIPDVPARLDILRVLLRKTPHTLTESQLQII 374

Query: 621 SMATHGFVGADLAALCNEAALVCLRRY---SKIQ-----TSSDVLHS 659
           S  THG+VGADL  L  EA  + ++R    S+IQ     T +D LH+
Sbjct: 375 SAQTHGYVGADLDGLVREAGTLAIKRMLDSSRIQEHGVITFADFLHA 421



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 138/239 (57%), Gaps = 21/239 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG+S     L++ I    +   T + LG++PTKG+LL+GPPG  KT  A+  A +SG
Sbjct: 443 SDIGGVSHIRERLREAIEWPLLHPETFARLGVQPTKGLLLYGPPGCSKTLTAKALATESG 502

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N  +V GPE++++  GESE+A+ EVF  A   AP ++F DE+DA+  AR D     +  
Sbjct: 503 INFLSVKGPELLNKYVGESERAVREVFAKARAGAPCIIFFDEIDALGTARNDDRTSGAHE 562

Query: 530 MVAT-LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            V T +LN MDG+    GV+V+AATNRPD ++ AL RPGRLD+           +L   P
Sbjct: 563 GVLTSMLNEMDGIQELQGVIVVAATNRPDVMDSALMRPGRLDK-----------ILYVGP 611

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLR 645
              P    R EIL        H  +++ +++  L+  T G  GA+L A+C +AA + +R
Sbjct: 612 ---PDARGREEILRIR---TRHMTIEAGIDFALLAQMTEGCSGAELTAMCQDAATLAMR 664



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 136/258 (52%), Gaps = 19/258 (7%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            + +VGG       + + +E P      F     +PP G+L+ GPPG  KT +ARA+A+  
Sbjct: 187  YHNVGGLSTQIALIRDLIEIPLTRPHLFSHFNLKPPKGVLLHGPPGTGKTHLARAIATST 246

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
                L V GPE+ S + GESE+ +R +F +A+ ++P I+  DE+D +   R    DG  V
Sbjct: 247  NSRVLVVNGPEISSAYHGESEQRLREVFERAKRSSPCIVVLDEVDAICPKRDDGGDGNEV 306

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  LDG+            +     DPAL RPGRFDR + +G P+   R +I
Sbjct: 307  GKRVVATLLTLLDGM------------DDSTAQDPALRRPGRFDREVEIGIPDVPARLDI 354

Query: 954  FRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR------IT 1006
             R+ LRK P + ++  ++ ++  + G  GAD+  + REA   AI+  LD+SR      IT
Sbjct: 355  LRVLLRKTPHTLTESQLQIISAQTHGYVGADLDGLVREAGTLAIKRMLDSSRIQEHGVIT 414

Query: 1007 MQHLKTAIRHVQPSEIHS 1024
                  A+  ++PS + S
Sbjct: 415  FADFLHALPSIRPSALRS 432


>gi|392566568|gb|EIW59744.1| AAA family ATPase [Trametes versicolor FP-101664 SS1]
          Length = 785

 Score =  295 bits (755), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 140/286 (48%), Positives = 196/286 (68%), Gaps = 4/286 (1%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            +L   D   A   VRPSA+R + L+   V + D+GGQ +   +L E VEWP  H EAF R
Sbjct: 488  QLTYADVLTALPTVRPSALRSLFLDTVPVHYSDIGGQAQTIQKLRECVEWPLLHPEAFAR 547

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G R P G+L++GPPGCSKTL+ RA A+E+G+NFLAVKGPEL +K+VGESE+AVR +F+K
Sbjct: 548  LGVRAPRGVLLYGPPGCSKTLLVRACATESGVNFLAVKGPELLNKYVGESERAVREIFSK 607

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            AR  APSIIFFDEID LA  R     G    + V++ LL E+DG+ + V VT++AATNRP
Sbjct: 608  ARGAAPSIIFFDEIDALAGSRTSSDGGGGAQEGVLTSLLNEMDGVQELVGVTIVAATNRP 667

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            D ID AL+RPGR DR+LYVGPP+   R EI RI  +K+     +++ ++A ++EGC+GA+
Sbjct: 668  DVIDSALMRPGRLDRILYVGPPDLEGRVEILRIRTQKMSVEEGLDLEQIARMTEGCSGAE 727

Query: 984  ISLICREAAISAIEENLDASRITMQHLKTAIRHVQ----PSEIHSY 1025
            I+ +C+EAA+  ++EN+DA  +       A R+++    P  + +Y
Sbjct: 728  ITALCQEAALLTMKENIDAPFVPKDAFVRAARNIKKQITPEVVETY 773



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/263 (42%), Positives = 162/263 (61%), Gaps = 23/263 (8%)

Query: 402 VQATVEQD-ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTS 459
           VQ  V  D  + +GGL K+ A ++D+I I  +        GL+P +GVLLHGPPGTGKT 
Sbjct: 230 VQRGVSADAYASVGGLDKQIAQIRDLIEIPLTRPELFRQFGLKPPRGVLLHGPPGTGKTH 289

Query: 460 LARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR 519
           LAR  A  +G  +  VNGPE+ S  +GE+E  + +VF  A   +P ++ +DE+DAI P R
Sbjct: 290 LARAIAASTGSAVLIVNGPELSSAYHGETESRIRDVFTEARARSPCIIVLDEVDAICPRR 349

Query: 520 KDG-GEELSQRMVATLLNLMDGVCRT--DG----VLVIAATNRPDSIEPALRRPGRLDRE 572
           ++G G E+ +R+VA LL LMDG+  T  DG    V+++A TNRP++I+PALRRPGR DRE
Sbjct: 350 EEGPGGEVEKRVVAQLLTLMDGMEETGKDGSEGKVMIVATTNRPNAIDPALRRPGRFDRE 409

Query: 573 IEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADL 632
           IEI               +P   +R +IL  LLS   H++ D E+  ++   HG+VGADL
Sbjct: 410 IEI--------------GIPGSEERYQILKVLLSKAPHAIADDELRSVAAKAHGYVGADL 455

Query: 633 AALCNEAALVCLRRYSKIQTSSD 655
           +A+  EA  + ++R+   Q+ S+
Sbjct: 456 SAVVREAGTLSIKRWLASQSPSE 478



 Score =  179 bits (455), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/271 (37%), Positives = 153/271 (56%), Gaps = 21/271 (7%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +   Q+ + +E P    E F++ G +PP G+L+ GPPG  KT +ARA+A+  
Sbjct: 239  YASVGGLDKQIAQIRDLIEIPLTRPELFRQFGLKPPRGVLLHGPPGTGKTHLARAIAAST 298

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            G   L V GPEL S + GE+E  +R +F +ARA +P II  DE+D +   R +E  G  V
Sbjct: 299  GSAVLIVNGPELSSAYHGETESRIRDVFTEARARSPCIIVLDEVDAICP-RREEGPGGEV 357

Query: 894  SDRVMSQLLVELDGLHQ------RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              RV++QLL  +DG+ +         V ++A TNRP+ IDPAL RPGRFDR + +G P  
Sbjct: 358  EKRVVAQLLTLMDGMEETGKDGSEGKVMIVATTNRPNAIDPALRRPGRFDREIEIGIPGS 417

Query: 948  TDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             +R +I ++ L K P + +D  +R +A  + G  GAD+S + REA   +I+  L +    
Sbjct: 418  EERYQILKVLLSKAPHAIADDELRSVAAKAHGYVGADLSAVVREAGTLSIKRWLASQSPS 477

Query: 1004 ----------RITMQHLKTAIRHVQPSEIHS 1024
                      ++T   + TA+  V+PS + S
Sbjct: 478  EAPTPSQSTPQLTYADVLTALPTVRPSALRS 508



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 143/246 (58%), Gaps = 22/246 (8%)

Query: 405 TVEQDISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
           TV    S +GG ++    L++ +    +     + LG+R  +GVLL+GPPG  KT L R 
Sbjct: 513 TVPVHYSDIGGQAQTIQKLRECVEWPLLHPEAFARLGVRAPRGVLLYGPPGCSKTLLVRA 572

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KD 521
           CA +SGVN   V GPE++++  GESE+A+ E+F  A  +AP+++F DE+DA+A +R   D
Sbjct: 573 CATESGVNFLAVKGPELLNKYVGESERAVREIFSKARGAAPSIIFFDEIDALAGSRTSSD 632

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
           GG    + ++ +LLN MDGV    GV ++AATNRPD I+ AL RPGRLDR          
Sbjct: 633 GGGGAQEGVLTSLLNEMDGVQELVGVTIVAATNRPDVIDSALMRPGRLDR---------- 682

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGM--EHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
            +L   P   P    R+EIL      M  E  L   ++E ++  T G  GA++ ALC EA
Sbjct: 683 -ILYVGP---PDLEGRVEILRIRTQKMSVEEGL---DLEQIARMTEGCSGAEITALCQEA 735

Query: 640 ALVCLR 645
           AL+ ++
Sbjct: 736 ALLTMK 741


>gi|392592222|gb|EIW81549.1| AAA-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
          Length = 833

 Score =  295 bits (755), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 148/291 (50%), Positives = 200/291 (68%), Gaps = 6/291 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L L   D   A   VRPSA+R V +E   V++ DVGGQ  V  +L EAVEWP  H EAF 
Sbjct: 530  LTLTAADLLTALPTVRPSALRSVFVESAPVRYSDVGGQAPVIARLREAVEWPLLHPEAFA 589

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G RPP G+L++GPPGCSKT++ARA A+E+G+NF+AVKGPEL +K+VGESE+AVR +F 
Sbjct: 590  RLGVRPPRGLLLYGPPGCSKTVLARACATESGVNFVAVKGPELLNKFVGESERAVREIFR 649

Query: 863  KARANAPSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
            KARA AP IIFFDEID L   R  G    G +  + V++ LL E+DG+ + V VT+IAAT
Sbjct: 650  KARALAPCIIFFDEIDALGTSRTSGGGGGGGAAHEGVLTSLLNEMDGVQELVGVTIIAAT 709

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD ID AL+RPGR DR+LYVGPP+   REEI RI    +     +++ E+A ++EGC+
Sbjct: 710  NRPDVIDSALMRPGRLDRILYVGPPDLAGREEILRIRTGGMSVQPGLDVAEIAKMTEGCS 769

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKE 1027
            GA+IS +C+EAA+  ++E++DA  ++     TA     R + P  I  +++
Sbjct: 770  GAEISALCQEAALITMKEDIDAEYVSQDAFFTAARAINRQITPDVIRKFEQ 820



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/225 (44%), Positives = 138/225 (61%), Gaps = 30/225 (13%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           GL+P +G+LLHGPPGTGKT LAR  A  +  ++  VNGPE+ S  +GE+E  L +VF  A
Sbjct: 306 GLKPPRGILLHGPPGTGKTHLARAIAASTRSSVLVVNGPELSSAYHGETEAKLRDVFREA 365

Query: 500 SQSAPAVVFIDELDAIAPARKD-GGEELSQRMVATLLNLMDGVCRTDG------------ 546
            + +P +V +DELDA+ P R+D GG E+ +R+VATLL ++DG+    G            
Sbjct: 366 REKSPCIVVLDELDALVPRREDAGGGEVEKRVVATLLTVLDGMDGDGGSGRGKGGQGGGG 425

Query: 547 ---VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHA 603
              V+VI  TNRP++I+PALRRPGR DRE EI               VP  A RL IL  
Sbjct: 426 GAKVVVIGTTNRPNAIDPALRRPGRFDREFEI--------------GVPDAAARLSILQV 471

Query: 604 LLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
           LLS   H+L  S++  ++   HG+VGADL+A+  EA  + ++R++
Sbjct: 472 LLSNTPHTLSPSDLHTIASRAHGYVGADLSAVVREAGTLAIKRWT 516



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/215 (44%), Positives = 128/215 (59%), Gaps = 21/215 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG+RP +G+LL+GPPG  KT LAR CA +SGVN   V GPE++++  GESE+A+ E+
Sbjct: 588 FARLGVRPPRGLLLYGPPGCSKTVLARACATESGVNFVAVKGPELLNKFVGESERAVREI 647

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELS----QRMVATLLNLMDGVCRTDGVLVIA 551
           F  A   AP ++F DE+DA+  +R  GG        + ++ +LLN MDGV    GV +IA
Sbjct: 648 FRKARALAPCIIFFDEIDALGTSRTSGGGGGGGAAHEGVLTSLLNEMDGVQELVGVTIIA 707

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME-H 610
           ATNRPD I+ AL RPGRLDR           +L   P   P  A R EIL     GM   
Sbjct: 708 ATNRPDVIDSALMRPGRLDR-----------ILYVGP---PDLAGREEILRIRTGGMSVQ 753

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             LD  V  ++  T G  GA+++ALC EAAL+ ++
Sbjct: 754 PGLD--VAEIAKMTEGCSGAEISALCQEAALITMK 786



 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 127/247 (51%), Gaps = 28/247 (11%)

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP GIL+ GPPG  KT +ARA+A+    + L V GPEL S + GE+E  +R +F +A
Sbjct: 306  GLKPPRGILLHGPPGTGKTHLARAIAASTRSSVLVVNGPELSSAYHGETEAKLRDVFREA 365

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVEL---------------DGLH 909
            R  +P I+  DE+D L   R +++ G  V  RV++ LL  L                G  
Sbjct: 366  REKSPCIVVLDELDALVP-RREDAGGGEVEKRVVATLLTVLDGMDGDGGSGRGKGGQGGG 424

Query: 910  QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVN 968
                V VI  TNRP+ IDPAL RPGRFDR   +G P+   R  I ++ L   P + S  +
Sbjct: 425  GGAKVVVIGTTNRPNAIDPALRRPGRFDREFEIGVPDAAARLSILQVLLSNTPHTLSPSD 484

Query: 969  IRELACLSEGCTGADISLICREAAISAIEENLDAS-----------RITMQHLKTAIRHV 1017
            +  +A  + G  GAD+S + REA   AI+    +             +T   L TA+  V
Sbjct: 485  LHTIASRAHGYVGADLSAVVREAGTLAIKRWTHSPSPTARADPLTLTLTAADLLTALPTV 544

Query: 1018 QPSEIHS 1024
            +PS + S
Sbjct: 545  RPSALRS 551


>gi|294495737|ref|YP_003542230.1| ATPase AAA [Methanohalophilus mahii DSM 5219]
 gi|292666736|gb|ADE36585.1| AAA family ATPase, CDC48 subfamily [Methanohalophilus mahii DSM 5219]
          Length = 761

 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 134/272 (49%), Positives = 192/272 (70%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   V+PSAMRE+++EVP V WEDVGG  EVK+ L EAVEWP K+ ++F+RIG   
Sbjct: 460  DFNEALKTVQPSAMREILIEVPNVTWEDVGGLEEVKSLLKEAVEWPLKYPDSFRRIGVDA 519

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KT++A+A+A E+ +NF++ KG +L SKW GESEK +  +F +AR  A
Sbjct: 520  PKGVLLYGPPGTGKTMLAKAIAHESNVNFISAKGSDLLSKWYGESEKRIAEVFVRARQVA 579

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSI+F DE+D LA +RG  +    V++R+++QLL E+DGL +   V VI ATNRPD IDP
Sbjct: 580  PSIVFLDELDALAPLRGAAAGEPQVTERIVNQLLSEMDGLEELRGVVVIGATNRPDIIDP 639

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+ V  P+   R +I ++H R +  + DV+  EL   ++  TGADI+ +C
Sbjct: 640  ALLRPGRFDELIMVPVPDSQTRNKILQVHTRNMMLAGDVDFSELVKQTDSFTGADIAAVC 699

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            ++A   A+ E+++AS++ MQH + A+    PS
Sbjct: 700  KKAGRFALREDINASKVQMQHFQKALEETGPS 731



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/267 (45%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P V +ED+GG +    ++ E +E P KH E F R+G   P G+L+ GPPG  KT++ARA
Sbjct: 207  IPTVMYEDLGGIKPAIGKIREMIELPLKHPELFDRLGIDAPKGVLLQGPPGTGKTMLARA 266

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E+   F+++ GPE+ SK+ GESE+ +R LF  A ANAPSIIF DEID +A  R + +
Sbjct: 267  VANESDAYFISINGPEIMSKFYGESEQHLRQLFEDAEANAPSIIFLDEIDSIAPKRAEVT 326

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V  RV+SQLL  +DGL +R NV VI ATNRP  +D AL RPGRFDR + +  P+  
Sbjct: 327  G--EVERRVVSQLLSLMDGLKERKNVIVIGATNRPGALDMALRRPGRFDREIELRVPDTD 384

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI------------ 996
             R EI +IH R +P + DVN+ ELA ++ G  GADI+ +CREAA+S++            
Sbjct: 385  GRLEILQIHTRGMPVTEDVNLEELADITYGFVGADIAALCREAAMSSLRRILPEIDLKAE 444

Query: 997  ---EENLDASRITMQHLKTAIRHVQPS 1020
                E +D  ++T +    A++ VQPS
Sbjct: 445  QIPREIIDKLQVTREDFNEALKTVQPS 471



 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/235 (45%), Positives = 148/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGG+      ++++I +          LG+   KGVLL GPPGTGKT LAR  A++S   
Sbjct: 215 LGGIKPAIGKIREMIELPLKHPELFDRLGIDAPKGVLLQGPPGTGKTMLARAVANESDAY 274

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             ++NGPE++S+ YGESEQ L ++F+ A  +AP+++F+DE+D+IAP R +   E+ +R+V
Sbjct: 275 FISINGPEIMSKFYGESEQHLRQLFEDAEANAPSIIFLDEIDSIAPKRAEVTGEVERRVV 334

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL+LMDG+     V+VI ATNRP +++ ALRRPGR DREIE+               V
Sbjct: 335 SQLLSLMDGLKERKNVIVIGATNRPGALDMALRRPGRFDREIEL--------------RV 380

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    RLEIL     GM  +  D  +E L+  T+GFVGAD+AALC EAA+  LRR
Sbjct: 381 PDTDGRLEILQIHTRGMPVT-EDVNLEELADITYGFVGADIAALCREAAMSSLRR 434



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/259 (40%), Positives = 146/259 (56%), Gaps = 27/259 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +  ++LK+ +        +   +G+   KGVLL+GPPGTGKT LA+  AH+S VN
Sbjct: 488 VGGLEEVKSLLKEAVEWPLKYPDSFRRIGVDAPKGVLLYGPPGTGKTMLAKAIAHESNVN 547

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             +  G +++S+ YGESE+ + EVF  A Q AP++VF+DELDA+AP R    G  ++++R
Sbjct: 548 FISAKGSDLLSKWYGESEKRIAEVFVRARQVAPSIVFLDELDALAPLRGAAAGEPQVTER 607

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL+ MDG+    GV+VI ATNRPD I+PAL RPGR D  I +              
Sbjct: 608 IVNQLLSEMDGLEELRGVVVIGATNRPDIIDPALLRPGRFDELIMV-------------- 653

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLRR- 646
            VP    R +IL      M   +L  +V++  L   T  F GAD+AA+C +A    LR  
Sbjct: 654 PVPDSQTRNKILQVHTRNM---MLAGDVDFSELVKQTDSFTGADIAAVCKKAGRFALRED 710

Query: 647 --YSKIQTS--SDVLHSTG 661
              SK+Q       L  TG
Sbjct: 711 INASKVQMQHFQKALEETG 729


>gi|219851454|ref|YP_002465886.1| AAA ATPase [Methanosphaerula palustris E1-9c]
 gi|219545713|gb|ACL16163.1| AAA family ATPase, CDC48 subfamily [Methanosphaerula palustris E1-9c]
          Length = 806

 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 158/326 (48%), Positives = 207/326 (63%), Gaps = 26/326 (7%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF +AR  V PSAMREV++EVP VKWED+GG  +VK  L E VEWP K+ + F+
Sbjct: 427  LKVTNADFTEARKHVDPSAMREVLVEVPDVKWEDIGGLEQVKKDLTETVEWPLKYADVFE 486

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++ T  P GIL+FGPPG  KT++A+AVA+E+  NF++VKGPEL SKWVGESEK VR +F 
Sbjct: 487  KLETSAPKGILLFGPPGTGKTMLAKAVANESQCNFISVKGPELLSKWVGESEKGVRDIFR 546

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  APSIIFFDEID L   RG  +    V++ V+SQ+L ELDGL +  NV V+AATNR
Sbjct: 547  KARQAAPSIIFFDEIDALVPSRGSYTGSSHVTESVVSQILTELDGLEELKNVVVLAATNR 606

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC--SSDVNIRELACLSEGCT 980
            PD ID AL+RPGR DR LYV PP+   R++IF ++LR      S DV I +L   +E   
Sbjct: 607  PDMIDKALMRPGRLDRHLYVPPPDREGRKKIFEVYLRHAEAILSGDVKIDDLVEKTERFV 666

Query: 981  GADISLICREAAISAIEENLDAS---------------RITMQHLKTAIRHV-------- 1017
            GADI  + REA +SA+ E +                  RIT +H + A+  V        
Sbjct: 667  GADIEALVREAKLSAMREFIGVMTGKTELERTEAIGNVRITGKHFEDALLKVNGSLDRDT 726

Query: 1018 -QPSEIHSYKELSAKFQRLVHSNAEA 1042
             + SE  S++ L  + QR++  +A A
Sbjct: 727  TEQSERQSWEILFNQDQRMILEDAAA 752



 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 114/263 (43%), Positives = 168/263 (63%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      Q+ E +E P +H E F+++G +PP G+L++GPPG  KTL+A+AVA+
Sbjct: 184  IHYEDIGGLGRELQQVREMIELPLRHPEIFEKLGIQPPKGVLLYGPPGTGKTLIAKAVAN 243

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F+ + GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R  E    
Sbjct: 244  EVDAHFITLSGPEIISKYYGESEGNLRQVFEEAQQNAPTIIFIDEIDSIAPKR--EDTKG 301

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATN PD +DPAL R GRFDR + +G P+   RE
Sbjct: 302  EVERRVVAQLLALMDGLKGRGEVIVIAATNLPDALDPALRRGGRFDREIEIGIPDRNGRE 361

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--------------E 997
            +IF++H R +P + DV++++L+  + G  GADI+L+ +EAA+ A+              +
Sbjct: 362  DIFKVHTRGVPLAEDVDLKDLSETTHGFVGADIALLVKEAAMHALRKVIPKIKDDEGIPD 421

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E LD  ++T      A +HV PS
Sbjct: 422  EVLDQLKVTNADFTEARKHVDPS 444



 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 153/244 (62%), Gaps = 16/244 (6%)

Query: 404 ATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLAR 462
           AT +     +GGL +E   ++++I +          LG++P KGVLL+GPPGTGKT +A+
Sbjct: 180 ATADIHYEDIGGLGRELQQVREMIELPLRHPEIFEKLGIQPPKGVLLYGPPGTGKTLIAK 239

Query: 463 LCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG 522
             A++   +  T++GPE++S+ YGESE  L +VF+ A Q+AP ++FIDE+D+IAP R+D 
Sbjct: 240 AVANEVDAHFITLSGPEIISKYYGESEGNLRQVFEEAQQNAPTIIFIDEIDSIAPKREDT 299

Query: 523 GEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
             E+ +R+VA LL LMDG+     V+VIAATN PD+++PALRR GR DREIEI       
Sbjct: 300 KGEVERRVVAQLLALMDGLKGRGEVIVIAATNLPDALDPALRRGGRFDREIEI------- 352

Query: 583 LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV 642
                   +P    R +I      G+  +  D +++ LS  THGFVGAD+A L  EAA+ 
Sbjct: 353 -------GIPDRNGREDIFKVHTRGVPLA-EDVDLKDLSETTHGFVGADIALLVKEAAMH 404

Query: 643 CLRR 646
            LR+
Sbjct: 405 ALRK 408



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 140/258 (54%), Gaps = 36/258 (13%)

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           KG+LL GPPGTGKT LA+  A++S  N  +V GPE++S+  GESE+ + ++F  A Q+AP
Sbjct: 494 KGILLFGPPGTGKTMLAKAVANESQCNFISVKGPELLSKWVGESEKGVRDIFRKARQAAP 553

Query: 505 AVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPA 562
           +++F DE+DA+ P+R    G   +++ +V+ +L  +DG+     V+V+AATNRPD I+ A
Sbjct: 554 SIIFFDEIDALVPSRGSYTGSSHVTESVVSQILTELDGLEELKNVVVLAATNRPDMIDKA 613

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLL-DSEVEY 619
           L RPGRLDR +                 VP P +  R +I    L   E  L  D +++ 
Sbjct: 614 LMRPGRLDRHL----------------YVPPPDREGRKKIFEVYLRHAEAILSGDVKIDD 657

Query: 620 LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHS---------TGTLFEFEGHS 670
           L   T  FVGAD+ AL  EA L  +R +  + T    L           TG  FE     
Sbjct: 658 LVEKTERFVGADIEALVREAKLSAMREFIGVMTGKTELERTEAIGNVRITGKHFE----- 712

Query: 671 DTMLQ-DSDCSRNITESS 687
           D +L+ +    R+ TE S
Sbjct: 713 DALLKVNGSLDRDTTEQS 730


>gi|190345884|gb|EDK37849.2| hypothetical protein PGUG_01947 [Meyerozyma guilliermondii ATCC 6260]
          Length = 768

 Score =  295 bits (755), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 139/293 (47%), Positives = 206/293 (70%), Gaps = 6/293 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +KL + D E+A +++RPSAMRE+ LE+PKV W D+GGQ E+K +L+E V+ P +    F 
Sbjct: 473  IKLYIDDVEEALLEIRPSAMREIFLEMPKVYWSDIGGQEELKRKLVEVVQLPLEATSTFA 532

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G   P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+F+K+VGESE+ +R +F 
Sbjct: 533  NLGVSAPRGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERTIREIFR 592

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID ++  R  +S   S + +V++ LL E+DG+ +   V ++AATNR
Sbjct: 593  KARAASPSIIFFDEIDAISGDR--DSASTSAASQVLTTLLNEIDGVEELNGVVIVAATNR 650

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            P +IDPALLRPGR DR +YV PP+   R +I +    K      V++ E+A L+EGC+GA
Sbjct: 651  PTEIDPALLRPGRLDRHIYVAPPDFEARLQILQTRTAKFNLPESVSLAEIAELTEGCSGA 710

Query: 983  DISLICREAAISAIEENLDASRITMQH----LKTAIRHVQPSEIHSYKELSAK 1031
            +++L+ +EA ++A+ EN  A+R+  +H    LK   R +    +  Y+E +A+
Sbjct: 711  EVALVSQEAGLAAVMENKRATRVEKRHFDHALKGVSRGITEDMLDYYREFAAR 763



 Score =  198 bits (503), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 152/248 (61%), Gaps = 19/248 (7%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            S +GGL KE ++L+ II +  +     +  G+ P +GVLLHGPPGTGKT L R  A++ 
Sbjct: 235 FSNIGGLDKEISLLRSIIEVPLNNPGLFAEFGIAPPRGVLLHGPPGTGKTMLLRSVANEV 294

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELS 527
             ++  VNGP +VS+  GE+E AL E+F  A Q  P+++F+DE+D++AP R  D   E  
Sbjct: 295 DAHVLAVNGPSIVSKYLGETENALREIFSEARQYQPSIIFMDEIDSLAPNRNSDDSGETE 354

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            R+VATLL +MDG+  +  V+VI ATNRP+S++PALRRPGR D+E+EI            
Sbjct: 355 SRVVATLLTMMDGMGESGRVVVIGATNRPNSLDPALRRPGRFDQEVEI------------ 402

Query: 588 PAAVPSPAQRLEILHALLSGM--EHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCL 644
              +P    RL+IL      M  E   L++ ++  +++ THG+VGADL ALC E+ +  +
Sbjct: 403 --GIPDVNARLDILSKQFGKMSKEKCCLEAKDISAVALKTHGYVGADLTALCRESVMKAI 460

Query: 645 RRYSKIQT 652
            R  K  T
Sbjct: 461 NRGKKTDT 468



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 148/260 (56%), Gaps = 11/260 (4%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            + ++GG  +  + L   +E P  +   F   G  PP G+L+ GPPG  KT++ R+VA+E 
Sbjct: 235  FSNIGGLDKEISLLRSIIEVPLNNPGLFAEFGIAPPRGVLLHGPPGTGKTMLLRSVANEV 294

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + LAV GP + SK++GE+E A+R +F++AR   PSIIF DEID LA  R  +  G + 
Sbjct: 295  DAHVLAVNGPSIVSKYLGETENALREIFSEARQYQPSIIFMDEIDSLAPNRNSDDSGETE 354

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
            S RV++ LL  +DG+ +   V VI ATNRP+ +DPAL RPGRFD+ + +G P+   R +I
Sbjct: 355  S-RVVATLLTMMDGMGESGRVVVIGATNRPNSLDPALRRPGRFDQEVEIGIPDVNARLDI 413

Query: 954  FRIHLRKIP----CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS------ 1003
                  K+     C    +I  +A  + G  GAD++ +CRE+ + AI             
Sbjct: 414  LSKQFGKMSKEKCCLEAKDISAVALKTHGYVGADLTALCRESVMKAINRGKKTDTPQGDI 473

Query: 1004 RITMQHLKTAIRHVQPSEIH 1023
            ++ +  ++ A+  ++PS + 
Sbjct: 474  KLYIDDVEEALLEIRPSAMR 493



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 22/223 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           ST ++LG+   +GVLL+GPPG  KT  A+  A +SG+N   V GPE+ ++  GESE+ + 
Sbjct: 529 STFANLGVSAPRGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERTIR 588

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           E+F  A  ++P+++F DE+DAI+  R       + +++ TLLN +DGV   +GV+++AAT
Sbjct: 589 EIFRKARAASPSIIFFDEIDAISGDRDSASTSAASQVLTTLLNEIDGVEELNGVVIVAAT 648

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS--GMEHS 611
           NRP  I+PAL RPGRLDR I +              A P    RL+IL    +   +  S
Sbjct: 649 NRPTEIDPALLRPGRLDRHIYV--------------APPDFEARLQILQTRTAKFNLPES 694

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCL---RRYSKIQ 651
           +  +E+  L   T G  GA++A +  EA L  +   +R ++++
Sbjct: 695 VSLAEIAEL---TEGCSGAEVALVSQEAGLAAVMENKRATRVE 734


>gi|366998886|ref|XP_003684179.1| hypothetical protein TPHA_0B00730 [Tetrapisispora phaffii CBS 4417]
 gi|357522475|emb|CCE61745.1| hypothetical protein TPHA_0B00730 [Tetrapisispora phaffii CBS 4417]
          Length = 776

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 137/295 (46%), Positives = 209/295 (70%), Gaps = 6/295 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ + D E A +++RPSAMRE+ LE+PKV W D+GGQ E+K ++ E ++ P +  + F
Sbjct: 478  SLKITVNDVEDAMLEIRPSAMREIFLEMPKVYWSDIGGQEELKRKMKEMIQLPLEAADTF 537

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 538  DRLGVSAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 597

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+ +PSIIFFDEID L+  R   S   S +  V++ LL E+DG+     V ++AATN
Sbjct: 598  RKARSASPSIIFFDEIDALSPDRDGGS-SSSAASHVLTSLLNEIDGVEDLKGVVIVAATN 656

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 980
            RPD+IDPALLRPGR DR +YV PP    R +I + + +      +++++ ELA  ++GC+
Sbjct: 657  RPDEIDPALLRPGRLDRHIYVAPPTYDARLQILKNNTKNFQVEKANIDLEELARRTDGCS 716

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA++ L+C+EA ++AI EN+D   +T +H + A+    R + P  +  Y+E +++
Sbjct: 717  GAEVVLLCQEAGLAAIMENIDTDFVTPEHFEKALQGIARGITPEMLEYYQEFASR 771



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/249 (42%), Positives = 158/249 (63%), Gaps = 21/249 (8%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +G LSKE  +L++ +     +S L +  G+ P +G+LLHGPPGTGKT L R  A  S  +
Sbjct: 242 VGALSKEIEVLRNAVELPLNQSQLFADFGITPPRGILLHGPPGTGKTMLLRCVASSSDAH 301

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
           + T++GP +VS+  G++E  L ++F  A +  P+++FIDE+D+IAP R  D   E   R+
Sbjct: 302 VLTIDGPSIVSKYLGDTENTLRDIFREAQKYQPSIIFIDEIDSIAPNRTNDDSGEAESRV 361

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           VATLL LMDG+  +  V+V+AATNRP+S++PALRRPGR D+E+EI               
Sbjct: 362 VATLLTLMDGMNGSGKVVVVAATNRPNSVDPALRRPGRFDQEVEI--------------G 407

Query: 591 VPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +P    RL+IL    S M    H+L D +++ ++  THG+VGADL ALC E+ +  ++R 
Sbjct: 408 IPDVEGRLDILSKQFSKMSPKRHNLSDEDIKVIAAKTHGYVGADLTALCRESVMKTIQR- 466

Query: 648 SKIQTSSDV 656
             ++T+SD+
Sbjct: 467 -GLKTASDM 474



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 168/316 (53%), Gaps = 28/316 (8%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +  VG   +    L  AVE P    + F   G  PP GIL+ GPPG  KT++ R VAS
Sbjct: 237  VSYNSVGALSKEIEVLRNAVELPLNQSQLFADFGITPPRGILLHGPPGTGKTMLLRCVAS 296

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
             +  + L + GP + SK++G++E  +R +F +A+   PSIIF DEID +A  R  +  G 
Sbjct: 297  SSDAHVLTIDGPSIVSKYLGDTENTLRDIFREAQKYQPSIIFIDEIDSIAPNRTNDDSGE 356

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            + S RV++ LL  +DG++    V V+AATNRP+ +DPAL RPGRFD+ + +G P+   R 
Sbjct: 357  AES-RVVATLLTLMDGMNGSGKVVVVAATNRPNSVDPALRRPGRFDQEVEIGIPDVEGRL 415

Query: 952  EIFRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAISAIEENL------- 1000
            +I      K+       SD +I+ +A  + G  GAD++ +CRE+ +  I+  L       
Sbjct: 416  DILSKQFSKMSPKRHNLSDEDIKVIAAKTHGYVGADLTALCRESVMKTIQRGLKTASDMS 475

Query: 1001 -DASRITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADE 1044
             D+ +IT+  ++ A+  ++P               S+I   +EL  K + ++    EA +
Sbjct: 476  SDSLKITVNDVEDAMLEIRPSAMREIFLEMPKVYWSDIGGQEELKRKMKEMIQLPLEAAD 535

Query: 1045 SGYQLRPSKSIGSNMW 1060
            +  +L  S   G  ++
Sbjct: 536  TFDRLGVSAPKGVLLY 551



 Score =  156 bits (394), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/236 (38%), Positives = 133/236 (56%), Gaps = 16/236 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T   LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 511 SDIGGQEELKRKMKEMIQLPLEAADTFDRLGVSAPKGVLLYGPPGCSKTLTAKALATESG 570

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE+ ++  GESE+A+ E+F  A  ++P+++F DE+DA++P R  G    +  
Sbjct: 571 INFLAVKGPEIFNKYVGESERAIREIFRKARSASPSIIFFDEIDALSPDRDGGSSSSAAS 630

Query: 530 MVAT-LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            V T LLN +DGV    GV+++AATNRPD I+PAL RPGRLDR I +             
Sbjct: 631 HVLTSLLNEIDGVEDLKGVVIVAATNRPDEIDPALLRPGRLDRHIYV------------- 677

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            A P+   RL+IL       +    + ++E L+  T G  GA++  LC EA L  +
Sbjct: 678 -APPTYDARLQILKNNTKNFQVEKANIDLEELARRTDGCSGAEVVLLCQEAGLAAI 732


>gi|448489612|ref|ZP_21607708.1| ATPase AAA [Halorubrum californiensis DSM 19288]
 gi|445694578|gb|ELZ46702.1| ATPase AAA [Halorubrum californiensis DSM 19288]
          Length = 755

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 145/302 (48%), Positives = 200/302 (66%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   + PSA+REV +EVP V W+DVGG    K +L E ++WP ++ E F+ +  + 
Sbjct: 439  DFKEAIKGIEPSALREVFVEVPDVTWDDVGGLENTKERLRETIQWPLEYPEVFEELDMQA 498

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+E+  NF+++KGPEL +K+VGESEK VR +F+KAR NA
Sbjct: 499  AKGVLMYGPPGTGKTLLAKAVANESESNFISIKGPELLNKYVGESEKGVREVFSKARENA 558

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+FFDEID +A  RGK S    V +RV+SQLL ELDGL    +V VIA TNRPD ID 
Sbjct: 559  PTIVFFDEIDSIATERGKNSGDSGVGERVVSQLLTELDGLESLEDVVVIATTNRPDLIDS 618

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+ET R  IF +H R  P + DV++  LA  +EG  GADI  + 
Sbjct: 619  ALLRPGRLDRHVHVPVPDETARRRIFEVHTRNKPLADDVDLDALARKTEGYVGADIEAVA 678

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            + E++   R+TMQH + A+  V PS        Y+E+  +F
Sbjct: 679  REASMNASREFIGSVTREEVGESVGNVRVTMQHFEDALSEVNPSVTPETRERYEEIEKQF 738

Query: 1033 QR 1034
            +R
Sbjct: 739  KR 740



 Score =  216 bits (549), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 112/266 (42%), Positives = 162/266 (60%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 187  PDVTYEDIGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAV 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   NF  + GPE+ SK+ GESE+ +R +F +A   +PSIIF DE+D +A  R  E  
Sbjct: 247  ANEIDANFHTISGPEIMSKYYGESEEQLREVFEEASEESPSIIFMDELDSIAPKR--EEA 304

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + VG P+   
Sbjct: 305  GGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEVGVPDRDG 364

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P +  +++ E A  + G  GAD+  + +E+A+ A+           + 
Sbjct: 365  RKEILQVHTRNMPLTDGIDLDEYAENTHGFVGADLESLAKESAMHALRRIRPEIDLESDE 424

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K AI+ ++PS
Sbjct: 425  IDADVLNSIQVTEADFKEAIKGIEPS 450



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 149/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 194 IGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAN 253

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ AS+ +P+++F+DELD+IAP R++ G ++ +R+V
Sbjct: 254 FHTISGPEIMSKYYGESEEQLREVFEEASEESPSIIFMDELDSIAPKREEAGGDVERRVV 313

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIE+               V
Sbjct: 314 AQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEV--------------GV 359

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL      M   L D  +++  +  THGFVGADL +L  E+A+  LRR
Sbjct: 360 PDRDGRKEILQVHTRNM--PLTDGIDLDEYAENTHGFVGADLESLAKESAMHALRR 413



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 145/258 (56%), Gaps = 21/258 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               L ++  KGVL++GPPGTGKT LA+  A++S  N  ++ GPE++++  GESE+ + E
Sbjct: 490 VFEELDMQAAKGVLMYGPPGTGKTLLAKAVANESESNFISIKGPELLNKYVGESEKGVRE 549

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR-KDGGEE-LSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP +VF DE+D+IA  R K+ G+  + +R+V+ LL  +DG+   + V+VIA 
Sbjct: 550 VFSKARENAPTIVFFDEIDSIATERGKNSGDSGVGERVVSQLLTELDGLESLEDVVVIAT 609

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  I    +      L
Sbjct: 610 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDETARRRIFE--VHTRNKPL 653

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSD 671
            D  +++ L+  T G+VGAD+ A+  EA++   R +    T  +V  S G +     H +
Sbjct: 654 ADDVDLDALARKTEGYVGADIEAVAREASMNASREFIGSVTREEVGESVGNVRVTMQHFE 713

Query: 672 TMLQDSDCSRNITESSRD 689
             L  S+ + ++T  +R+
Sbjct: 714 DAL--SEVNPSVTPETRE 729


>gi|325967941|ref|YP_004244133.1| ATPase AAA [Vulcanisaeta moutnovskia 768-28]
 gi|323707144|gb|ADY00631.1| AAA family ATPase, possible cell division control protein cdc48
            [Vulcanisaeta moutnovskia 768-28]
          Length = 748

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 142/313 (45%), Positives = 213/313 (68%), Gaps = 16/313 (5%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            SE+   +++   DF +A   ++P+ +REVI+EVP++ W+D+GG   VK +L E VEWP +
Sbjct: 432  SEQLARIRIRRRDFLEAMKYIQPTVLREVIVEVPEIHWDDIGGYDNVKQELKEMVEWPLR 491

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            +   F+ +G  PP GIL+FGPPG  KTL+A+AVA+E+  NF+AV+GPE+ SKW GESE+A
Sbjct: 492  YPRYFEELGIDPPKGILLFGPPGTGKTLLAKAVATESNANFIAVRGPEILSKWFGESERA 551

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            +R +F KAR  AP +IFFDEID +A  RG   D    +DR+++QLL E+DG+    NV V
Sbjct: 552  IREIFKKARMAAPCVIFFDEIDAIAPARGLRVDS-GATDRIVNQLLAEMDGIAPLKNVVV 610

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN------IR 970
            IAATNR D +DPALLRPGRFDR++YV PP+E  R EI ++H+R +  S +V       ++
Sbjct: 611  IAATNRADIVDPALLRPGRFDRIVYVPPPDENARFEIIKVHIRGLKLSDEVKDSDYKYLK 670

Query: 971  ELACLSEGCTGADISLICREAAISAIEENLDASR-----ITMQHLKTAIRHVQPS----E 1021
            +LA  +EG TGAD++ + REAA+ A+ E + ++      + ++H + A++ V PS    +
Sbjct: 671  DLARRTEGYTGADLAALVREAAMLALRETIRSNSNQVRPVDIEHFEEALKVVPPSLAKQD 730

Query: 1022 IHSYKELSAKFQR 1034
            I  ++E++   +R
Sbjct: 731  IARFEEMARNLRR 743



 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 119/269 (44%), Positives = 176/269 (65%), Gaps = 16/269 (5%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            ++VR   +RE+ L +P+V WED+G   E K ++ E +E P +H E FK +G  PP G+L+
Sbjct: 161  VQVREEPVREMELAMPRVTWEDIGDLEEAKRKIRELIELPLRHPEIFKHLGIEPPKGVLL 220

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
             GPPG  KTL+A+AVASEA   F+++ GPE+ SK+ GESE  +R +F +A+ NAP+IIF 
Sbjct: 221  IGPPGTGKTLLAKAVASEANAYFVSINGPEIMSKYYGESEAKLREIFEEAKKNAPAIIFI 280

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV++QLL  +DGL +R  V VI ATNRP+ +DPAL RPG
Sbjct: 281  DEIDAIAPKR-EEVTG-EVEKRVVAQLLTLMDGLQERGQVIVIGATNRPEAVDPALRRPG 338

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIP-CSSD-------------VNIRELACLSEGCT 980
            RFDR +Y+  P++  R+EI ++H R +P C+ +             V+I ELA ++ G T
Sbjct: 339  RFDREIYISMPDKNARKEILQVHTRNVPLCTEEDVKENMCDPNSDVVSIDELAEMTHGYT 398

Query: 981  GADISLICREAAISAIEENLDASRITMQH 1009
            GAD++ + +EAA+  + E ++   I ++ 
Sbjct: 399  GADLAALVKEAAMIRLREAIEKKEIDLEQ 427



 Score =  189 bits (481), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 100/223 (44%), Positives = 137/223 (61%), Gaps = 27/223 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL GPPGTGKT LA+  A ++     ++NGPE++S+ YGESE  L E+
Sbjct: 207 FKHLGIEPPKGVLLIGPPGTGKTLLAKAVASEANAYFVSINGPEIMSKYYGESEAKLREI 266

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++APA++FIDE+DAIAP R++   E+ +R+VA LL LMDG+     V+VI ATNR
Sbjct: 267 FEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQVIVIGATNR 326

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSG-------- 607
           P++++PALRRPGR DREI I M              P    R EIL              
Sbjct: 327 PEAVDPALRRPGRFDREIYISM--------------PDKNARKEILQVHTRNVPLCTEED 372

Query: 608 MEHSLLDSE-----VEYLSMATHGFVGADLAALCNEAALVCLR 645
           ++ ++ D       ++ L+  THG+ GADLAAL  EAA++ LR
Sbjct: 373 VKENMCDPNSDVVSIDELAEMTHGYTGADLAALVKEAAMIRLR 415



 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/220 (45%), Positives = 132/220 (60%), Gaps = 28/220 (12%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A +S  N   V GPE++S+ +GESE+A+ E+
Sbjct: 496 FEELGIDPPKGILLFGPPGTGKTLLAKAVATESNANFIAVRGPEILSKWFGESERAIREI 555

Query: 496 FDSASQSAPAVVFIDELDAIAPARK---DGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A  +AP V+F DE+DAIAPAR    D G   + R+V  LL  MDG+     V+VIAA
Sbjct: 556 FKKARMAAPCVIFFDEIDAIAPARGLRVDSG--ATDRIVNQLLAEMDGIAPLKNVVVIAA 613

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEH 610
           TNR D ++PAL RPGR DR +                 VP P +  R EI+   + G++ 
Sbjct: 614 TNRADIVDPALLRPGRFDRIV----------------YVPPPDENARFEIIKVHIRGLKL 657

Query: 611 S--LLDSEVEY---LSMATHGFVGADLAALCNEAALVCLR 645
           S  + DS+ +Y   L+  T G+ GADLAAL  EAA++ LR
Sbjct: 658 SDEVKDSDYKYLKDLARRTEGYTGADLAALVREAAMLALR 697


>gi|402870397|ref|XP_003899212.1| PREDICTED: LOW QUALITY PROTEIN: spermatogenesis-associated protein
           5, partial [Papio anubis]
          Length = 834

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 132/241 (54%), Positives = 184/241 (76%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           +K+ L DF +A   +RPSAMRE+ ++VP V W D+GG   +K +L +AVEWP KH E+F 
Sbjct: 594 VKITLNDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 653

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           R+G +PP GIL++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR  F 
Sbjct: 654 RMGIQPPKGILLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 713

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           KARA APSIIFFDE+D LA  RG      +V+DRV++QLL E+DG+ Q  +VT++AATNR
Sbjct: 714 KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 773

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
           PD+ID AL+RPGR DR++YV  P+   R EIF++    +P S++V++ EL   ++  +GA
Sbjct: 774 PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 833

Query: 983 D 983
           +
Sbjct: 834 E 834



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 160/256 (62%), Gaps = 20/256 (7%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           Q+ Q  V  D+  +GGLS +   +++II +         S G+   +GVLL+GPPGTGKT
Sbjct: 343 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 400

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            +AR  A++ G  +  +NGPE++S+ YGE+E  L ++F  A+   P+++FIDELDA+ P 
Sbjct: 401 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 460

Query: 519 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 575
           R+    E+ +R+VA+LL LMDG+    ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 461 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 520

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
                          VP+   RL+IL  LL  + H L ++E+  L+ + HG+VGADL  L
Sbjct: 521 --------------GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKIL 566

Query: 636 CNEAALVCLRRYSKIQ 651
           CNEA L  LRR  K Q
Sbjct: 567 CNEAGLCALRRILKKQ 582



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 149/269 (55%), Gaps = 18/269 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            KV ++ +GG       + E +E P K  E FK  G   P G+L++GPPG  KT++ARAVA
Sbjct: 348  KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 407

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G     + GPE+ SK+ GE+E  +R +FA+A    PSIIF DE+D L   R  E   
Sbjct: 408  NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 465

Query: 891  VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              V  RV++ LL  +DG+   V+   V V+ ATNRP  +D AL RPGRFD+ + +G PN 
Sbjct: 466  NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 525

Query: 948  TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
             DR +I +  LR++P   ++  + +LA  + G  GAD+ ++C EA + A+   L      
Sbjct: 526  QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKILCNEAGLCALRRILKKQPNL 585

Query: 1004 ---------RITMQHLKTAIRHVQPSEIH 1023
                     +IT+     A+  ++PS + 
Sbjct: 586  PDVKVAGLVKITLNDFLQAMNDIRPSAMR 614



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 115/195 (58%), Gaps = 17/195 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G++P KG+LL+GPPG  KT +A+  A++SG+N   + GPE++++  GESE+A+ E F  
Sbjct: 655 MGIQPPKGILLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 714

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A   AP+++F DELDA+A  R    G   ++ R++A LL  MDG+ +   V ++AATNRP
Sbjct: 715 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 774

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+ AL RPGR+DR I + +              P  A R EI       M  S  + +
Sbjct: 775 DRIDKALMRPGRIDRIIYVPL--------------PDAATRREIFKLQFHSMPVS-NEVD 819

Query: 617 VEYLSMATHGFVGAD 631
           ++ L + T  + GA+
Sbjct: 820 LDELILQTDAYSGAE 834


>gi|156839538|ref|XP_001643459.1| hypothetical protein Kpol_483p20 [Vanderwaltozyma polyspora DSM
            70294]
 gi|156114070|gb|EDO15601.1| hypothetical protein Kpol_483p20 [Vanderwaltozyma polyspora DSM
            70294]
          Length = 783

 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 140/294 (47%), Positives = 204/294 (69%), Gaps = 6/294 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++ L D E A  ++RPSAMRE+ LE+PKV W D+GGQ ++K ++ E ++ P +  E F 
Sbjct: 485  LQVTLKDVENAMAEIRPSAMREIFLEMPKVYWSDIGGQDDLKRKMKEVIQLPLEAAETFA 544

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F 
Sbjct: 545  NLGVSAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFR 604

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID ++A R   S   + S  V++ LL E+DG+ +   V ++AATNR
Sbjct: 605  KARAASPSIIFFDEIDAISAARDGGSSTAAAS-HVLTSLLNEIDGVEELNGVVIVAATNR 663

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCTG 981
            PD+IDPALLRPGR DR +YV PP+   R +I +    K     S+VN+ ELA  +EGC+G
Sbjct: 664  PDEIDPALLRPGRLDRHIYVAPPDYEARLQILKKRTGKFNLEGSNVNLEELAKHTEGCSG 723

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            A++ L+C+EA ++AI E+ +A ++   H   A+    R +    +  Y+E + K
Sbjct: 724  AEVVLLCQEAGLAAIMEDYNACKVNSIHFDKALSEISRGITEEMLEYYQEFAQK 777



 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 101/239 (42%), Positives = 152/239 (63%), Gaps = 19/239 (7%)

Query: 413 LGGLSKEY-AILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  ++ K I +     +  S  G+ P +GVLLHGPPGTGKT L R  A+ S  +
Sbjct: 248 VGGLKREIDSLTKTIELPLHQPNLFSDFGINPPRGVLLHGPPGTGKTMLLRCVANSSNAH 307

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
           + T+NGP +VS+  GE+E  L E+FD A +  P+++FIDE+D++AP R  D   E+  R+
Sbjct: 308 VLTINGPSIVSKYLGETEAKLREIFDEAQKYQPSIIFIDEIDSLAPNRANDDSGEVESRV 367

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           VATLL LMDG+  +  ++V+AATNRP+S++PALRRPGR D+E+EI               
Sbjct: 368 VATLLTLMDGMGGSGRLVVVAATNRPNSVDPALRRPGRFDQEVEI--------------G 413

Query: 591 VPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +P    R +IL    S M    H+L + +++ ++  THG+VGADL+ALC E+ +  +++
Sbjct: 414 IPDVDARFDILKKQFSRMSEERHTLNEDDIKNIASKTHGYVGADLSALCRESVMKTIQK 472



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 162/286 (56%), Gaps = 16/286 (5%)

Query: 750  FEKARMKVRPSAMREV--ILEVP-KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
            F K   KVR ++  +V     +P +  + DVGG +     L + +E P      F   G 
Sbjct: 218  FRKDSAKVRFTSQSQVDSKYNLPQRFLYNDVGGLKREIDSLTKTIELPLHQPNLFSDFGI 277

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
             PP G+L+ GPPG  KT++ R VA+ +  + L + GP + SK++GE+E  +R +F +A+ 
Sbjct: 278  NPPRGVLLHGPPGTGKTMLLRCVANSSNAHVLTINGPSIVSKYLGETEAKLREIFDEAQK 337

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
              PSIIF DEID LA  R  +  G  V  RV++ LL  +DG+     + V+AATNRP+ +
Sbjct: 338  YQPSIIFIDEIDSLAPNRANDDSG-EVESRVVATLLTLMDGMGGSGRLVVVAATNRPNSV 396

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP----CSSDVNIRELACLSEGCTGA 982
            DPAL RPGRFD+ + +G P+   R +I +    ++       ++ +I+ +A  + G  GA
Sbjct: 397  DPALRRPGRFDQEVEIGIPDVDARFDILKKQFSRMSEERHTLNEDDIKNIASKTHGYVGA 456

Query: 983  DISLICREAAISAIEENLDAS--------RITMQHLKTAIRHVQPS 1020
            D+S +CRE+ +  I++ L+ S        ++T++ ++ A+  ++PS
Sbjct: 457  DLSALCRESVMKTIQKALNNSEPIDRSKLQVTLKDVENAMAEIRPS 502



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/270 (37%), Positives = 150/270 (55%), Gaps = 22/270 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG       +K++I +      T ++LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 517 SDIGGQDDLKRKMKEVIQLPLEAAETFANLGVSAPKGVLLYGPPGCSKTLTAKALATESG 576

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEEL--S 527
           +N   V GPE+ ++  GESE+A+ E+F  A  ++P+++F DE+DAI+ AR DGG     +
Sbjct: 577 INFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAISAAR-DGGSSTAAA 635

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
             ++ +LLN +DGV   +GV+++AATNRPD I+PAL RPGRLDR I +            
Sbjct: 636 SHVLTSLLNEIDGVEELNGVVIVAATNRPDEIDPALLRPGRLDRHIYV------------ 683

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC-LRR 646
             A P    RL+IL            +  +E L+  T G  GA++  LC EA L   +  
Sbjct: 684 --APPDYEARLQILKKRTGKFNLEGSNVNLEELAKHTEGCSGAEVVLLCQEAGLAAIMED 741

Query: 647 YSKIQTSSDVLHSTGTLFEF-EGHSDTMLQ 675
           Y+  + +S  +H    L E   G ++ ML+
Sbjct: 742 YNACKVNS--IHFDKALSEISRGITEEMLE 769


>gi|294654757|ref|XP_456823.2| DEHA2A11286p [Debaryomyces hansenii CBS767]
 gi|199429126|emb|CAG84798.2| DEHA2A11286p [Debaryomyces hansenii CBS767]
          Length = 792

 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 138/276 (50%), Positives = 196/276 (71%), Gaps = 3/276 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +KLEL D E+A  ++RPSAMRE+ LE+PKV W D+GGQ E+K +L E V+ P +  + F 
Sbjct: 496  IKLELRDVEEALPEIRPSAMREIFLEMPKVYWSDIGGQEELKQKLTEVVQLPLEAADTFN 555

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G   P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+F+K+VGESE+ +R +F 
Sbjct: 556  KLGVSAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERTIREIFR 615

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID ++  R  ES G S S  V++ LL E+DG+ +   V ++ ATNR
Sbjct: 616  KARAASPSIIFFDEIDAISGDR--ESSGTSASQNVLTSLLNEIDGVEELKGVVIVGATNR 673

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS-DVNIRELACLSEGCTG 981
            P +IDPALLRPGR DR +YV PP+   R +I      K      +VN+  LA L+ GC+G
Sbjct: 674  PTEIDPALLRPGRLDRHIYVSPPDYDARLQILTKGCSKFNLDGREVNLSTLADLTNGCSG 733

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHV 1017
            A+++L+C EA +SA+ E+  A+ +  +H   A++ +
Sbjct: 734  AEVALLCHEAGLSAVMEDKQATCVEQRHFDHALKGI 769



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 150/241 (62%), Gaps = 19/241 (7%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S++GGLS+  A+L+  I       TL S  G+ P +G+LLHGPPGTGKT L R  A+++ 
Sbjct: 259 SQVGGLSRPIALLQSTIELPLHNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANETN 318

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQ 528
            ++ TVNGP +VS+  GE+E A+ ++F+ A +  P+++F+DE+D++AP R  D   E   
Sbjct: 319 AHVLTVNGPSIVSKYLGETENAIRDIFEEARKFQPSIIFLDEIDSLAPNRNSDDSGETES 378

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+VATLL +MDG+  T  ++V+ ATNRP+SI+PALRRPGR D+E+EI             
Sbjct: 379 RVVATLLTMMDGMGDTGRIVVVGATNRPNSIDPALRRPGRFDQEVEI------------- 425

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLD---SEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             +P    R +IL      M+ S  D    E+  ++  THG+VGADL ALC E+ +  + 
Sbjct: 426 -GIPDVEARGDILIKQFDKMDKSKFDLTKEEINSIASKTHGYVGADLTALCRESVMKAIN 484

Query: 646 R 646
           R
Sbjct: 485 R 485



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/278 (37%), Positives = 156/278 (56%), Gaps = 11/278 (3%)

Query: 750  FEKARMKVRPSAMREVIL----EVPK-VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            F K + ++  S +RE +     ++P+ V +  VGG       L   +E P  +   F   
Sbjct: 229  FSKGKTQINTSVIREPLRSKFPQLPQPVGYSQVGGLSRPIALLQSTIELPLHNPTLFSDF 288

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G  PP GIL+ GPPG  KT++ R VA+E   + L V GP + SK++GE+E A+R +F +A
Sbjct: 289  GISPPRGILLHGPPGTGKTMLLRCVANETNAHVLTVNGPSIVSKYLGETENAIRDIFEEA 348

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R   PSIIF DEID LA  R  +  G + S RV++ LL  +DG+     + V+ ATNRP+
Sbjct: 349  RKFQPSIIFLDEIDSLAPNRNSDDSGETES-RVVATLLTMMDGMGDTGRIVVVGATNRPN 407

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS----SDVNIRELACLSEGCT 980
             IDPAL RPGRFD+ + +G P+   R +I      K+  S    +   I  +A  + G  
Sbjct: 408  SIDPALRRPGRFDQEVEIGIPDVEARGDILIKQFDKMDKSKFDLTKEEINSIASKTHGYV 467

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            GAD++ +CRE+ + AI  +L AS I  + +K  +R V+
Sbjct: 468  GADLTALCRESVMKAINRSLKAS-IPQREIKLELRDVE 504



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/207 (41%), Positives = 122/207 (58%), Gaps = 14/207 (6%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T + LG+   KGVLL+GPPG  KT  A+  A +SG+N   V GPE+ ++  GESE+ + E
Sbjct: 553 TFNKLGVSAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERTIRE 612

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F  A  ++P+++F DE+DAI+  R+  G   SQ ++ +LLN +DGV    GV+++ ATN
Sbjct: 613 IFRKARAASPSIIFFDEIDAISGDRESSGTSASQNVLTSLLNEIDGVEELKGVVIVGATN 672

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RP  I+PAL RPGRLDR I +           SP   P    RL+IL    S       +
Sbjct: 673 RPTEIDPALLRPGRLDRHIYV-----------SP---PDYDARLQILTKGCSKFNLDGRE 718

Query: 615 SEVEYLSMATHGFVGADLAALCNEAAL 641
             +  L+  T+G  GA++A LC+EA L
Sbjct: 719 VNLSTLADLTNGCSGAEVALLCHEAGL 745


>gi|443895628|dbj|GAC72973.1| AAA+-type ATPase [Pseudozyma antarctica T-34]
          Length = 873

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 137/278 (49%), Positives = 198/278 (71%), Gaps = 15/278 (5%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ-------------REVKTQLMEA 790
            ++   D   A   VRPSAMRE+ LE PKV W D+ G              + V+ Q+ E 
Sbjct: 554  RVTAADLLAALSVVRPSAMREIFLEPPKVYWSDIAGSATPSSGGSGALSTKSVQAQVREL 613

Query: 791  VEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWV 850
            VEWP KH  +F R+G  PP G+L++GPPGCSKTL+ARA+A+E+GLNFLAVKGPEL+SK+V
Sbjct: 614  VEWPIKHAASFARLGVSPPRGVLLYGPPGCSKTLIARALATESGLNFLAVKGPELYSKYV 673

Query: 851  GESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLH 909
            GESE+A+R  F KARA APSI+FFDEID L++ R G++S G +++ R+++ LL E+DG+ 
Sbjct: 674  GESERAIRETFKKARAAAPSIVFFDEIDALSSSRDGEQSGGDALNSRIIATLLNEMDGIE 733

Query: 910  QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD-VN 968
               +V V+ ATNRP  +DPALLRPGR DRL+YVGPP+   R +I R  + K+  + D V+
Sbjct: 734  AMPDVIVVGATNRPQSLDPALLRPGRLDRLVYVGPPDHNARMQILRTRMAKMAVAEDAVD 793

Query: 969  IRELACLSEGCTGADISLICREAAISAIEENLDASRIT 1006
            + +LA ++EGC+GA++  +C+EA + A++E+++  +++
Sbjct: 794  LDKLAQMTEGCSGAEVVSVCQEAGLLAMDEDINCDKVS 831



 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/298 (38%), Positives = 162/298 (54%), Gaps = 61/298 (20%)

Query: 407 EQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCA 465
           E   SKLGGL ++ A +K +I +           GL+P KGVLL+GPPGTGKTSLAR  A
Sbjct: 246 EDPYSKLGGLDRQIAEIKTLIEMPLMSPEIFVQYGLKPPKGVLLYGPPGTGKTSLARAVA 305

Query: 466 HDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK----- 520
             +G +  T+NGPE+ S  +GE+E  L ++F  A + +P ++ IDE+DA+AP R+     
Sbjct: 306 AATGSSYLTINGPELSSAFHGETESKLRDIFKEARRKSPCIIIIDEIDALAPRREGGSGD 365

Query: 521 ----DGGEELSQRMVATLLNLMDGVCRTDG------------------------------ 546
               DG  E+ +R+VA LL L+DG+    G                              
Sbjct: 366 GSNADGAGEVERRVVAQLLTLLDGMEDGGGEDSEDDHIDEEQQGGAASPSESGQKIASGV 425

Query: 547 ------VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI 600
                 V+++AATNRP++I+PALRR GRLDREIEI               VP    R +I
Sbjct: 426 DKPPARVVILAATNRPNAIDPALRRYGRLDREIEI--------------GVPDKHARQDI 471

Query: 601 LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKIQTSSDVL 657
           L  L+  + ++L   +V  L+  THGFVGADL+AL  EA +  +RR +++ Q+ SD L
Sbjct: 472 LRTLVQPVPNNLTAEQVNDLAGRTHGFVGADLSALVREAGMRAVRRTFARQQSKSDQL 529



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 132/214 (61%), Gaps = 17/214 (7%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           ++ + LG+ P +GVLL+GPPG  KT +AR  A +SG+N   V GPE+ S+  GESE+A+ 
Sbjct: 622 ASFARLGVSPPRGVLLYGPPGCSKTLIARALATESGLNFLAVKGPELYSKYVGESERAIR 681

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           E F  A  +AP++VF DE+DA++ +R   + GG+ L+ R++ATLLN MDG+     V+V+
Sbjct: 682 ETFKKARAAAPSIVFFDEIDALSSSRDGEQSGGDALNSRIIATLLNEMDGIEAMPDVIVV 741

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
            ATNRP S++PAL RPGRLDR + +                P    R++IL   ++ M  
Sbjct: 742 GATNRPQSLDPALLRPGRLDRLVYV--------------GPPDHNARMQILRTRMAKMAV 787

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           +    +++ L+  T G  GA++ ++C EA L+ +
Sbjct: 788 AEDAVDLDKLAQMTEGCSGAEVVSVCQEAGLLAM 821



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 141/271 (52%), Gaps = 44/271 (16%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  +GG      ++   +E P    E F + G +PP G+L++GPPG  KT +ARAVA+  
Sbjct: 249  YSKLGGLDRQIAEIKTLIEMPLMSPEIFVQYGLKPPKGVLLYGPPGTGKTSLARAVAAAT 308

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR------GKE 887
            G ++L + GPEL S + GE+E  +R +F +AR  +P II  DEID LA  R      G  
Sbjct: 309  GSSYLTINGPELSSAFHGETESKLRDIFKEARRKSPCIIIIDEIDALAPRREGGSGDGSN 368

Query: 888  SDGVS-VSDRVMSQLLVELDGLH---------------------------QRV------- 912
            +DG   V  RV++QLL  LDG+                            Q++       
Sbjct: 369  ADGAGEVERRVVAQLLTLLDGMEDGGGEDSEDDHIDEEQQGGAASPSESGQKIASGVDKP 428

Query: 913  --NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNI 969
               V ++AATNRP+ IDPAL R GR DR + +G P++  R++I R  ++ +P + +   +
Sbjct: 429  PARVVILAATNRPNAIDPALRRYGRLDREIEIGVPDKHARQDILRTLVQPVPNNLTAEQV 488

Query: 970  RELACLSEGCTGADISLICREAAISAIEENL 1000
             +LA  + G  GAD+S + REA + A+    
Sbjct: 489  NDLAGRTHGFVGADLSALVREAGMRAVRRTF 519


>gi|412988862|emb|CCO15453.1| predicted protein [Bathycoccus prasinos]
          Length = 1053

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 149/277 (53%), Positives = 200/277 (72%), Gaps = 11/277 (3%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A+ + RPSAMR++ +E+  + W+DVGGQ + K  L E VEW + H +A ++IG +P
Sbjct: 750  DFIVAKNRARPSAMRDINVEISSINWDDVGGQADTKNSLKELVEWAETHPDAMQKIGAKP 809

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPGCSKT +ARAVAS++  NFLAVKGPELFSK+VGESEKAVR+LF +AR+ A
Sbjct: 810  PNGILLYGPPGCSKTTLARAVASQSKRNFLAVKGPELFSKYVGESEKAVRTLFKRARSVA 869

Query: 869  PSIIFFDEIDGLAAIRG---KESDGVSVSDRVMSQLLVELDGLH---QRVNVTVIAATNR 922
            PSIIF DEIDGLA+ RG    +S+G SV DRV++QLL+E+DGL+   +   + VIAATNR
Sbjct: 870  PSIIFIDEIDGLASSRGGGETKSEGSSVYDRVVTQLLLEMDGLNSSSRAEKIAVIAATNR 929

Query: 923  PDKIDPALLRPGRFDRLLYV-GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            PD +D ALLRPGRFDRLL+V  P    +R EI     RK P + DVN+  +  ++E  TG
Sbjct: 930  PDLVDEALLRPGRFDRLLFVKAPETSKERAEILACAFRKTPLAPDVNLERVGDMTEKFTG 989

Query: 982  ADISLICREAAISAIEENLDASR----ITMQHLKTAI 1014
            AD++ + REAA+ A+EE  +       + M+H++ AI
Sbjct: 990  ADLANLAREAALCALEEEDENETEIEAVYMRHVEKAI 1026



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 140/249 (56%), Gaps = 29/249 (11%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           L G       LKDI+    V + L    G+ P +G LL GPPGTGKT LAR  A  S   
Sbjct: 473 LAGCESHIVALKDIVTLPLVNADLFKKCGVAPPRGALLWGPPGTGKTLLARHAAETSNAT 532

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE------- 524
           LF V+GPE+V    GE+E+A+ EVF +A+++ PA+V IDELDA+ P+R +  +       
Sbjct: 533 LFVVDGPELVGSVVGETEEAIREVFRAAAKAKPAIVLIDELDALCPSRGENVQNSGGSSG 592

Query: 525 ------ELSQRMVATLLNLMDG-VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM 577
                  L+ R VA L  + DG V   DG++V+A TNRPD+++  LRRPGR DRE+E++ 
Sbjct: 593 KGGEESNLNTRAVAALTEIFDGNVVNLDGIVVLATTNRPDAVDVGLRRPGRFDRELEVN- 651

Query: 578 SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 637
                         P P QR EIL + L  ++H L +  +   +   HGFVGAD+A L  
Sbjct: 652 -------------APDPQQRFEILKSHLGTIKHDLTEEIIRETAWTMHGFVGADIAQLVR 698

Query: 638 EAALVCLRR 646
           +AA   +RR
Sbjct: 699 DAASNAMRR 707



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 116/229 (50%), Gaps = 25/229 (10%)

Query: 787 LMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELF 846
           L + V  P  + + FK+ G  PP G L++GPPG  KTL+AR  A  +      V GPEL 
Sbjct: 483 LKDIVTLPLVNADLFKKCGVAPPRGALLWGPPGTGKTLLARHAAETSNATLFVVDGPELV 542

Query: 847 SKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK------------------ES 888
              VGE+E+A+R +F  A    P+I+  DE+D L   RG+                   +
Sbjct: 543 GSVVGETEEAIREVFRAAAKAKPAIVLIDELDALCPSRGENVQNSGGSSGKGGEESNLNT 602

Query: 889 DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             V+    +    +V LDG      + V+A TNRPD +D  L RPGRFDR L V  P+  
Sbjct: 603 RAVAALTEIFDGNVVNLDG------IVVLATTNRPDAVDVGLRRPGRFDRELEVNAPDPQ 656

Query: 949 DREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAI 996
            R EI + HL  I    ++  IRE A    G  GADI+ + R+AA +A+
Sbjct: 657 QRFEILKSHLGTIKHDLTEEIIRETAWTMHGFVGADIAQLVRDAASNAM 705



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 126/243 (51%), Gaps = 27/243 (11%)

Query: 413  LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
            +GG +     LK+++  + +    +  +G +P  G+LL+GPPG  KT+LAR  A  S  N
Sbjct: 778  VGGQADTKNSLKELVEWAETHPDAMQKIGAKPPNGILLYGPPGCSKTTLARAVASQSKRN 837

Query: 472  LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-----GEEL 526
               V GPE+ S+  GESE+A+  +F  A   AP+++FIDE+D +A +R  G     G  +
Sbjct: 838  FLAVKGPELFSKYVGESEKAVRTLFKRARSVAPSIIFIDEIDGLASSRGGGETKSEGSSV 897

Query: 527  SQRMVATLLNLMDGV---CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSL 583
              R+V  LL  MDG+    R + + VIAATNRPD ++ AL RPGR DR        LF  
Sbjct: 898  YDRVVTQLLLEMDGLNSSSRAEKIAVIAATNRPDLVDEALLRPGRFDR-------LLF-- 948

Query: 584  LKNSPAAVPSPAQRLEILHALLSGMEHSLL--DSEVEYLSMATHGFVGADLAALCNEAAL 641
                   V +P    E    L      + L  D  +E +   T  F GADLA L  EAAL
Sbjct: 949  -------VKAPETSKERAEILACAFRKTPLAPDVNLERVGDMTEKFTGADLANLAREAAL 1001

Query: 642  VCL 644
              L
Sbjct: 1002 CAL 1004


>gi|397772857|ref|YP_006540403.1| AAA family ATPase [Natrinema sp. J7-2]
 gi|397681950|gb|AFO56327.1| AAA family ATPase [Natrinema sp. J7-2]
          Length = 753

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 145/302 (48%), Positives = 199/302 (65%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG  E K QL E ++WP  + E F+++  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGETKEQLRETIQWPLDYPEVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R+ IF +H R  P +  V++  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEDARKAIFEVHTRNKPLAESVDLEWLAGETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            REA+++A            +++ +   RI  QH + A+  V PS        Y+EL  +F
Sbjct: 678  REASMAASREFINSVDPEEMDDTIGNVRIGKQHFEHALEEVNPSVSPDTREQYEELEDEF 737

Query: 1033 QR 1034
            Q+
Sbjct: 738  QQ 739



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVAYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   NF  + GPE+ SK+ GESE+ +R +F +A  NAPSIIF DE+D +AA R  E 
Sbjct: 245  VANEIDANFETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKE 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R+EI ++H R +P    +++ + A  + G  GAD+  + RE+A++A+            
Sbjct: 363  GRKEILQVHTRGMPLDEGIDLDQYAESTHGFVGADLESLARESAMNALRRIRPELDLESE 422

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                + LD+  +T +  K A++ +QPS
Sbjct: 423  EIDADVLDSLEVTERDFKEALKGIQPS 449



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 109/237 (45%), Positives = 151/237 (63%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAN 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++AP+++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDS--EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM    LD   +++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGMP---LDEGIDLDQYAESTHGFVGADLESLARESAMNALRR 412



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 139/242 (57%), Gaps = 22/242 (9%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL +    L++ I            + ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLGETKEQLRETIQWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + EVF+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEI--LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              VP    R  I  +H     +  S+   ++E+L+  T G+VGAD+ A+C EA++   R
Sbjct: 632 --PVPDEDARKAIFEVHTRNKPLAESV---DLEWLAGETEGYVGADIEAVCREASMAASR 686

Query: 646 RY 647
            +
Sbjct: 687 EF 688


>gi|448340542|ref|ZP_21529513.1| AAA family ATPase [Natrinema gari JCM 14663]
 gi|445629975|gb|ELY83245.1| AAA family ATPase [Natrinema gari JCM 14663]
          Length = 753

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 145/302 (48%), Positives = 199/302 (65%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG  E K QL E ++WP  + E F+++  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGETKEQLRETIQWPLDYPEVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R+ IF +H R  P +  V++  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEDARKAIFEVHTRNKPLAESVDLEWLAGETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            REA+++A            +++ +   RI  QH + A+  V PS        Y+EL  +F
Sbjct: 678  REASMAASREFINSVDPEEMDDTIGNVRIGKQHFEHALEEVNPSVSPDTREQYEELEDEF 737

Query: 1033 QR 1034
            Q+
Sbjct: 738  QQ 739



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVAYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   NF  + GPE+ SK+ GESE+ +R +F +A  NAPSIIF DE+D +AA R  E 
Sbjct: 245  VANEIDANFETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKE 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R+EI ++H R +P    +++ + A  + G  GAD+  + RE+A++A+            
Sbjct: 363  GRKEILQVHTRGMPLDEGIDLDQYAESTHGFVGADLESLARESAMNALRRIRPELDLESE 422

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                + LD+  +T +  K A++ +QPS
Sbjct: 423  EIDADVLDSLEVTERDFKEALKGIQPS 449



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 109/237 (45%), Positives = 151/237 (63%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAN 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++AP+++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDS--EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM    LD   +++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGMP---LDEGIDLDQYAESTHGFVGADLESLARESAMNALRR 412



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 139/242 (57%), Gaps = 22/242 (9%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL +    L++ I            + ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLGETKEQLRETIQWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + EVF+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEI--LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              VP    R  I  +H     +  S+   ++E+L+  T G+VGAD+ A+C EA++   R
Sbjct: 632 --PVPDEDARKAIFEVHTRNKPLAESV---DLEWLAGETEGYVGADIEAVCREASMAASR 686

Query: 646 RY 647
            +
Sbjct: 687 EF 688


>gi|254169043|ref|ZP_04875881.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum boonei T469]
 gi|197622013|gb|EDY34590.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum boonei T469]
          Length = 738

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 144/309 (46%), Positives = 212/309 (68%), Gaps = 9/309 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+   DF++A  ++ PS +REV++E+P V W++VG   E K  L EAVE P K+ EAFK
Sbjct: 433  MKVTKEDFKEALKEIEPSVLREVMIEIPSVHWDEVGDLEEAKRILKEAVELPLKNPEAFK 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G R   GIL++GPPG  KTL+A+AVA+E+  NF+++KGPE+ SKWVGESEKA+R +F 
Sbjct: 493  RMGIRASKGILLYGPPGTGKTLLAKAVATESEANFISIKGPEVMSKWVGESEKAIREIFK 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+ ++P I+F DEID +A  RG    G  V++R+++QLL  +DGL     V VIAATNR
Sbjct: 553  KAKQSSPCIVFLDEIDAIAPRRGY-YGGSGVTERIVNQLLTSMDGLTTLEGVVVIAATNR 611

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGR DR++Y+ PPNE  R +I ++H +K+P + DV++ ++A  +E  TGA
Sbjct: 612  PDIVDPALLRPGRIDRIVYIEPPNEEARLKILKVHTKKMPLAEDVSLEDIAMRTEFYTGA 671

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHS 1038
            D+  +CREA ++AI EN  + ++ M+H + A+  V PS     I  Y+ +  +  + V +
Sbjct: 672  DLENLCREAGMAAIREN--SEKVHMKHFEEALGVVHPSLDKETIKYYESIGLELSKGVKT 729

Query: 1039 NAEADESGY 1047
                D+ GY
Sbjct: 730  K--KDDLGY 736



 Score =  227 bits (578), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 116/268 (43%), Positives = 173/268 (64%), Gaps = 21/268 (7%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG ++   ++ E +E P KH E F+R+G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 185  VTYEDIGGLKDELQKVREMIELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLIAKAVAN 244

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F A+ GPE+ SK+ G+SE+ +R +F  A+ NAPSIIF DEID +A  R +E  G 
Sbjct: 245  ESNAHFYAINGPEIMSKFYGQSEERLREIFQNAQKNAPSIIFIDEIDSIAPKR-EEVTG- 302

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R ++ VI ATNR D +DPAL RPGRFDR + +G P++  R+
Sbjct: 303  EVERRVVAQLLTLMDGLGKRGHIIVIGATNRIDAVDPALRRPGRFDREIEIGIPDKKGRK 362

Query: 952  EIFRIHLRKIPC-----SSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
            EI +IH R +P        D  + ELA L+ G  GAD++ + REAA++A+          
Sbjct: 363  EILQIHTRGMPIEGSPEEKDKLLEELAELTHGFVGADLAALAREAAMNALRRYLPKIDLD 422

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+  ++T +  K A++ ++PS
Sbjct: 423  KPVPTEILENMKVTKEDFKEALKEIEPS 450



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 108/240 (45%), Positives = 153/240 (63%), Gaps = 19/240 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++S  +
Sbjct: 190 IGGLKDELQKVREMIELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLIAKAVANESNAH 249

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            + +NGPE++S+ YG+SE+ L E+F +A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 250 FYAINGPEIMSKFYGQSEERLREIFQNAQKNAPSIIFIDEIDSIAPKREEVTGEVERRVV 309

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+ +   ++VI ATNR D+++PALRRPGR DREIEI               +
Sbjct: 310 AQLLTLMDGLGKRGHIIVIGATNRIDAVDPALRRPGRFDREIEI--------------GI 355

Query: 592 PSPAQRLEILHALLSGM----EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM         D  +E L+  THGFVGADLAAL  EAA+  LRRY
Sbjct: 356 PDKKGRKEILQIHTRGMPIEGSPEEKDKLLEELAELTHGFVGADLAALAREAAMNALRRY 415



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 17/240 (7%)

Query: 412 KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           ++G L +   ILK+ + +          +G+R +KG+LL+GPPGTGKT LA+  A +S  
Sbjct: 466 EVGDLEEAKRILKEAVELPLKNPEAFKRMGIRASKGILLYGPPGTGKTLLAKAVATESEA 525

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQR 529
           N  ++ GPEV+S+  GESE+A+ E+F  A QS+P +VF+DE+DAIAP R   GG  +++R
Sbjct: 526 NFISIKGPEVMSKWVGESEKAIREIFKKAKQSSPCIVFLDEIDAIAPRRGYYGGSGVTER 585

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL  MDG+   +GV+VIAATNRPD ++PAL RPGR+DR + I+             
Sbjct: 586 IVNQLLTSMDGLTTLEGVVVIAATNRPDIVDPALLRPGRIDRIVYIE------------- 632

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
             P+   RL+IL      M  +  D  +E ++M T  + GADL  LC EA +  +R  S+
Sbjct: 633 -PPNEEARLKILKVHTKKMPLA-EDVSLEDIAMRTEFYTGADLENLCREAGMAAIRENSE 690


>gi|340500117|gb|EGR27016.1| hypothetical protein IMG5_203000 [Ichthyophthirius multifiliis]
          Length = 341

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 140/278 (50%), Positives = 203/278 (73%), Gaps = 6/278 (2%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L+  +F+ A  +V  S +++++++VPKV W+D+GG   +K Q+ + +EWP KH EAFKR+
Sbjct: 47   LDFSNFQNALSRVHASGIKQILMDVPKVLWKDIGGYSNIKDQIKQVIEWPLKHPEAFKRM 106

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +P  GIL++GPPGCSKT++A+A+A+E+ LNFLAVKGPELFSK+VG+SEKAVR +F +A
Sbjct: 107  GIQPSKGILLYGPPGCSKTMIAKAIATESKLNFLAVKGPELFSKYVGDSEKAVRDVFRRA 166

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R  APSIIFFDEID +A  R   +D   VS+RV+ Q+L E+DG+    NV ++AATNRP+
Sbjct: 167  RQCAPSIIFFDEIDAIATQRSINTD---VSERVLCQMLNEMDGIEGLKNVVIVAATNRPE 223

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSD-VNIRELACLSEGCTG 981
             ID AL RPGRFD L+YV PP+   R+EI +I++    +P + D +NI ELA  +EG +G
Sbjct: 224  IIDKALTRPGRFDHLIYVPPPDLLCRKEILKINIFDSGMPVNLDEINIDELAIKTEGFSG 283

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            A+I+LI REA +SA+  ++  S +  +  + A+  V+P
Sbjct: 284  AEINLIVREAGLSALSRDIYTSVVENKDFENALNMVKP 321



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 131/226 (57%), Gaps = 23/226 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              +G++P+KG+LL+GPPG  KT +A+  A +S +N   V GPE+ S+  G+SE+A+ +V
Sbjct: 103 FKRMGIQPSKGILLYGPPGCSKTMIAKAIATESKLNFLAVKGPELFSKYVGDSEKAVRDV 162

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A Q AP+++F DE+DAIA  R     ++S+R++  +LN MDG+     V+++AATNR
Sbjct: 163 FRRARQCAPSIIFFDEIDAIATQRS-INTDVSERVLCQMLNEMDGIEGLKNVVIVAATNR 221

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEIL--HALLSGMEHS 611
           P+ I+ AL RPGR D  I                 VP P    R EIL  +   SGM  +
Sbjct: 222 PEIIDKALTRPGRFDHLI----------------YVPPPDLLCRKEILKINIFDSGMPVN 265

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR--YSKIQTSSD 655
           L +  ++ L++ T GF GA++  +  EA L  L R  Y+ +  + D
Sbjct: 266 LDEINIDELAIKTEGFSGAEINLIVREAGLSALSRDIYTSVVENKD 311


>gi|345005302|ref|YP_004808155.1| AAA ATPase [halophilic archaeon DL31]
 gi|344320928|gb|AEN05782.1| AAA family ATPase, CDC48 subfamily [halophilic archaeon DL31]
          Length = 760

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 205/311 (65%), Gaps = 13/311 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   + PSA+REV +EVP V WEDVGG    K +L E ++WP  + E F+++  + 
Sbjct: 441  DFREALRGIEPSALREVFVEVPDVSWEDVGGLEGTKERLRETIQWPLDYPEVFRQMDVQS 500

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+L++GPPG  KTL+A+AVA+EA  NF++VKGPEL  K+VGESEK VR +F+KAR NA
Sbjct: 501  AKGVLLYGPPGTGKTLLAKAVANEAESNFISVKGPELLDKYVGESEKGVREIFSKARENA 560

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  RG+ S    VS+RV+SQLL ELDGL +  +V ++A TNRPD ID 
Sbjct: 561  PTVVFFDEIDAIATERGRNSGDSGVSERVVSQLLTELDGLEELEDVVIVATTNRPDLIDS 620

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+RPGR DR ++V  P+E  R  I R+H +  P S DV++ E+A  +EG  GAD+  + 
Sbjct: 621  ALIRPGRLDRHVHVPVPDEEARRAILRVHTQHKPLSDDVDLDEIASRTEGYVGADLEALA 680

Query: 989  REAAISAIEENL------DAS------RITMQHLKTAIRHVQPSEIHSYKELSAKFQ-RL 1035
            REA+++A  E +      DA       R+TM+H + A+  V PS     +E  A+ + R 
Sbjct: 681  REASMNATREFINTVAPEDADESVGNVRVTMKHFEAALGEVAPSVTDETREQYAEIEKRF 740

Query: 1036 VHSNAEADESG 1046
              S+ E D++G
Sbjct: 741  RRSDVERDQTG 751



 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 117/268 (43%), Positives = 169/268 (63%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E+P V +ED+GG      Q+ E +E P +H E F R+G  PP G+L+ GPPG  KTL+A+
Sbjct: 187  EMPDVAYEDIGGLDSELEQVREMIELPMRHPELFGRLGIEPPKGVLLHGPPGTGKTLIAK 246

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   +F  V GPE+ SK+ GESE+ +R +F +A+ N+P+IIF DE+D +A  R  +
Sbjct: 247  AVANEIDASFYTVSGPEIMSKYYGESEEQLRDIFEEAQENSPAIIFMDELDSIAPKR--D 304

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G  V  RV++QLL  +DGL +R  + VI ATNR D IDPAL R GRFDR + VG P+ 
Sbjct: 305  DAGGDVERRVVAQLLSLMDGLEERGEIVVIGATNRVDAIDPALRRGGRFDREIEVGVPDT 364

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDA 1002
              REEI ++H R +P + DV+I ELA  + G  GAD++ + +E+A+ A+     E +L+A
Sbjct: 365  NGREEILQVHTRNMPLADDVDIDELAESTHGFVGADLASLAKESAMIALRRFRPELDLEA 424

Query: 1003 SRI----------TMQHLKTAIRHVQPS 1020
              I          T +  + A+R ++PS
Sbjct: 425  DEIDAETLARLDVTAKDFREALRGIEPS 452



 Score =  206 bits (525), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 155/236 (65%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 196 IGGLDSELEQVREMIELPMRHPELFGRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 255

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            +TV+GPE++S+ YGESE+ L ++F+ A +++PA++F+DELD+IAP R D G ++ +R+V
Sbjct: 256 FYTVSGPEIMSKYYGESEEQLRDIFEEAQENSPAIIFMDELDSIAPKRDDAGGDVERRVV 315

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     ++VI ATNR D+I+PALRR GR DREIE+               V
Sbjct: 316 AQLLSLMDGLEERGEIVVIGATNRVDAIDPALRRGGRFDREIEV--------------GV 361

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL      M  +  D +++ L+ +THGFVGADLA+L  E+A++ LRR+
Sbjct: 362 PDTNGREEILQVHTRNMPLA-DDVDIDELAESTHGFVGADLASLAKESAMIALRRF 416



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 164/319 (51%), Gaps = 31/319 (9%)

Query: 380 LNAVSKSLRE---GTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKS 434
           L+  +K  RE   G  P+A  E F  V     +D+   GGL      L++ I        
Sbjct: 435 LDVTAKDFREALRGIEPSALREVFVEVPDVSWEDV---GGLEGTKERLRETIQWPLDYPE 491

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + ++  KGVLL+GPPGTGKT LA+  A+++  N  +V GPE++ +  GESE+ + E
Sbjct: 492 VFRQMDVQSAKGVLLYGPPGTGKTLLAKAVANEAESNFISVKGPELLDKYVGESEKGVRE 551

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A ++AP VVF DE+DAIA    R  G   +S+R+V+ LL  +DG+   + V+++A 
Sbjct: 552 IFSKARENAPTVVFFDEIDAIATERGRNSGDSGVSERVVSQLLTELDGLEELEDVVIVAT 611

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  IL       +H  
Sbjct: 612 TNRPDLIDSALIRPGRLDRHVHV--------------PVPDEEARRAILRV---HTQHKP 654

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHS 670
           L  +V+   +A  T G+VGADL AL  EA++   R +       D   S G +     H 
Sbjct: 655 LSDDVDLDEIASRTEGYVGADLEALAREASMNATREFINTVAPEDADESVGNVRVTMKHF 714

Query: 671 DTMLQDSDCSRNITESSRD 689
           +  L   + + ++T+ +R+
Sbjct: 715 EAAL--GEVAPSVTDETRE 731


>gi|124485944|ref|YP_001030560.1| beta-lactamase domain-containing protein [Methanocorpusculum
            labreanum Z]
 gi|124363485|gb|ABN07293.1| AAA family ATPase, CDC48 subfamily [Methanocorpusculum labreanum Z]
          Length = 810

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 149/301 (49%), Positives = 199/301 (66%), Gaps = 17/301 (5%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            +EK   LK+   DFE A   V+PSAMREV++EVP + W DVGG   VK +L +AVEWP K
Sbjct: 437  AEKLENLKVTAEDFESALKMVQPSAMREVLVEVPDIHWADVGGLDSVKEELQQAVEWPLK 496

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            ++E +K+  T+ P G LMFGPPG  KTL+A+AVA+E+  NF++VKGPEL SKWVGESEK 
Sbjct: 497  YREVYKQFATKSPKGFLMFGPPGTGKTLLAKAVANESECNFISVKGPELMSKWVGESEKG 556

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            +R +F KAR  +PSIIFFDEID +   RG       V++ V+SQ L ELDGL +  NV V
Sbjct: 557  IREIFRKARLASPSIIFFDEIDSIVPRRGSYEGSSHVTESVVSQFLTELDGLEELKNVVV 616

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP--CSSDVNIRELAC 974
            I ATNRPD IDPALLRPGR ++ ++V PP+   R++I  ++++ I    + DVN+ EL  
Sbjct: 617  IGATNRPDMIDPALLRPGRLEQHIFVPPPDREGRKQILDVYIKDISSMLAEDVNLDELVD 676

Query: 975  LSEGCTGADISLICREAAISAIEENL------DASRITM---------QHLKTAIRHVQP 1019
             +EG  GADI  + REA + AI E +      DA+ IT+         +H   A++ V+P
Sbjct: 677  KTEGFVGADIEALVREAKMVAIREFVKVMAGHDAAEITLAVSSVKVFGRHFDAALKRVRP 736

Query: 1020 S 1020
            S
Sbjct: 737  S 737



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/263 (44%), Positives = 170/263 (64%), Gaps = 16/263 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG     + + E +E+P +H E F+++G  PP G+L++GPPG  KTL+ARAVA+
Sbjct: 200  IHYEDIGGLGRELSLVREMIEYPLRHPEVFEKLGIEPPKGVLLYGPPGTGKTLIARAVAN 259

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            EAG  F  + GPE+ SK+ G+SE+ +R +F KA  NAPSIIF DEID +A  R +ES G 
Sbjct: 260  EAGAYFDTISGPEIISKYYGDSEEKLREIFEKAEENAPSIIFIDEIDSIAPKR-EESKG- 317

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VIAATN PD IDPAL R GRFDR + +G P++  R 
Sbjct: 318  EVERRVVAQLLSLMDGLKSRGKVIVIAATNLPDSIDPALRRGGRFDREIEIGVPDKDGRR 377

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI +IH R +P S +V + + A  + G  GAD++L+ +EAA+ A+               
Sbjct: 378  EILQIHARNVPLSENVKLEKYANTTHGFVGADLALMVKEAAMHALRRAFPGMNPDEEISA 437

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E L+  ++T +  ++A++ VQPS
Sbjct: 438  EKLENLKVTAEDFESALKMVQPS 460



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/237 (45%), Positives = 155/237 (65%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E ++++++I            LG+ P KGVLL+GPPGTGKT +AR  A+++G  
Sbjct: 205 IGGLGRELSLVREMIEYPLRHPEVFEKLGIEPPKGVLLYGPPGTGKTLIARAVANEAGAY 264

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YG+SE+ L E+F+ A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 265 FDTISGPEIISKYYGDSEEKLREIFEKAEENAPSIIFIDEIDSIAPKREESKGEVERRVV 324

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VIAATN PDSI+PALRR GR DREIEI               V
Sbjct: 325 AQLLSLMDGLKSRGKVIVIAATNLPDSIDPALRRGGRFDREIEI--------------GV 370

Query: 592 PSPAQRLEIL--HALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL  HA    +  ++   ++E  +  THGFVGADLA +  EAA+  LRR
Sbjct: 371 PDKDGRREILQIHARNVPLSENV---KLEKYANTTHGFVGADLALMVKEAAMHALRR 424



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 126/221 (57%), Gaps = 21/221 (9%)

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           KG L+ GPPGTGKT LA+  A++S  N  +V GPE++S+  GESE+ + E+F  A  ++P
Sbjct: 510 KGFLMFGPPGTGKTLLAKAVANESECNFISVKGPELMSKWVGESEKGIREIFRKARLASP 569

Query: 505 AVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPA 562
           +++F DE+D+I P R   +G   +++ +V+  L  +DG+     V+VI ATNRPD I+PA
Sbjct: 570 SIIFFDEIDSIVPRRGSYEGSSHVTESVVSQFLTELDGLEELKNVVVIGATNRPDMIDPA 629

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLL-DSEVEY 619
           L RPGRL++ I                 VP P +  R +IL   +  +   L  D  ++ 
Sbjct: 630 LLRPGRLEQHI----------------FVPPPDREGRKQILDVYIKDISSMLAEDVNLDE 673

Query: 620 LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHST 660
           L   T GFVGAD+ AL  EA +V +R + K+    D    T
Sbjct: 674 LVDKTEGFVGADIEALVREAKMVAIREFVKVMAGHDAAEIT 714


>gi|254169220|ref|ZP_04876054.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum boonei T469]
 gi|289596750|ref|YP_003483446.1| ATPase AAA [Aciduliprofundum boonei T469]
 gi|197621816|gb|EDY34397.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum boonei T469]
 gi|289534537|gb|ADD08884.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum boonei T469]
          Length = 738

 Score =  293 bits (750), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 144/309 (46%), Positives = 213/309 (68%), Gaps = 9/309 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+   DF++A  ++ PS +REV++E+P V W++VG   E K  L EAVE P K+ EAFK
Sbjct: 433  MKVTKEDFKEALKEIEPSVLREVMIEIPSVHWDEVGDLEEAKRILKEAVELPLKNPEAFK 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G R   GIL++GPPG  KTL+A+AVA+E+  NF+++KGPE+ SKWVGESEKA+R +F 
Sbjct: 493  RMGIRASKGILLYGPPGTGKTLLAKAVATESEANFISIKGPEVMSKWVGESEKAIREIFK 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+ ++P I+F DEID +A  RG    G  V++R+++QLL  +DGL     V VIAATNR
Sbjct: 553  KAKQSSPCIVFLDEIDAIAPRRGY-YGGSGVTERIVNQLLTSMDGLTTLEGVVVIAATNR 611

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGR DR++Y+ PPNE  R +I ++H +K+P + DV++ ++A  +E  TGA
Sbjct: 612  PDIVDPALLRPGRIDRIVYIEPPNEEARLKILKVHTKKMPLAEDVSLEDIAMRTEFYTGA 671

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHS 1038
            D+  +CREA ++AI EN  + ++ M+H + A+  V PS     I  Y+ +  +  + V  
Sbjct: 672  DLENLCREAGMAAIREN--SEKVHMKHFEEALGVVHPSLDKETIKYYESIGLELSKGV-- 727

Query: 1039 NAEADESGY 1047
             A+ ++ GY
Sbjct: 728  KAKKEDLGY 736



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 116/268 (43%), Positives = 173/268 (64%), Gaps = 21/268 (7%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG ++   ++ E +E P KH E F+R+G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 185  VTYEDIGGLKDELQKVREMIELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLIAKAVAN 244

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F A+ GPE+ SK+ G+SE+ +R +F  A+ NAPSIIF DEID +A  R +E  G 
Sbjct: 245  ESNAHFYAINGPEIMSKFYGQSEERLREIFQNAQKNAPSIIFIDEIDSIAPKR-EEVTG- 302

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R ++ VI ATNR D +DPAL RPGRFDR + +G P++  R+
Sbjct: 303  EVERRVVAQLLTLMDGLGKRGHIIVIGATNRIDAVDPALRRPGRFDREIEIGIPDKKGRK 362

Query: 952  EIFRIHLRKIPC-----SSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
            EI +IH R +P        D  + ELA L+ G  GAD++ + REAA++A+          
Sbjct: 363  EILQIHTRGMPIEGSPEEKDKLLEELAELTHGFVGADLAALAREAAMNALRRYLPKIDLD 422

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+  ++T +  K A++ ++PS
Sbjct: 423  KPVPTEILENMKVTKEDFKEALKEIEPS 450



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 108/240 (45%), Positives = 153/240 (63%), Gaps = 19/240 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++S  +
Sbjct: 190 IGGLKDELQKVREMIELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLIAKAVANESNAH 249

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            + +NGPE++S+ YG+SE+ L E+F +A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 250 FYAINGPEIMSKFYGQSEERLREIFQNAQKNAPSIIFIDEIDSIAPKREEVTGEVERRVV 309

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+ +   ++VI ATNR D+++PALRRPGR DREIEI               +
Sbjct: 310 AQLLTLMDGLGKRGHIIVIGATNRIDAVDPALRRPGRFDREIEI--------------GI 355

Query: 592 PSPAQRLEILHALLSGM----EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM         D  +E L+  THGFVGADLAAL  EAA+  LRRY
Sbjct: 356 PDKKGRKEILQIHTRGMPIEGSPEEKDKLLEELAELTHGFVGADLAALAREAAMNALRRY 415



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 17/240 (7%)

Query: 412 KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           ++G L +   ILK+ + +          +G+R +KG+LL+GPPGTGKT LA+  A +S  
Sbjct: 466 EVGDLEEAKRILKEAVELPLKNPEAFKRMGIRASKGILLYGPPGTGKTLLAKAVATESEA 525

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQR 529
           N  ++ GPEV+S+  GESE+A+ E+F  A QS+P +VF+DE+DAIAP R   GG  +++R
Sbjct: 526 NFISIKGPEVMSKWVGESEKAIREIFKKAKQSSPCIVFLDEIDAIAPRRGYYGGSGVTER 585

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL  MDG+   +GV+VIAATNRPD ++PAL RPGR+DR + I+             
Sbjct: 586 IVNQLLTSMDGLTTLEGVVVIAATNRPDIVDPALLRPGRIDRIVYIE------------- 632

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
             P+   RL+IL      M  +  D  +E ++M T  + GADL  LC EA +  +R  S+
Sbjct: 633 -PPNEEARLKILKVHTKKMPLA-EDVSLEDIAMRTEFYTGADLENLCREAGMAAIRENSE 690


>gi|297619992|ref|YP_003708097.1| AAA family ATPase [Methanococcus voltae A3]
 gi|297378969|gb|ADI37124.1| AAA family ATPase, CDC48 subfamily [Methanococcus voltae A3]
          Length = 781

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 140/284 (49%), Positives = 202/284 (71%), Gaps = 7/284 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF  A  +V PS +REV+++VP +KW D+GG  +VK +L+EAVEWP K+ + F 
Sbjct: 481  LKVTKTDFYDALKEVEPSTLREVLVDVPDIKWVDIGGLEDVKQELIEAVEWPLKYPDKFT 540

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G RPP GIL++G PG  KTL+A+AVA+E+  NF++VKGPE+FSKWVG+SEKA+R +F 
Sbjct: 541  KMGIRPPKGILLYGAPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGDSEKAIREIFK 600

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  +P++IFFDEID +A +RG  S G   +++V++QLL ELDGL +  ++ +IAATNR
Sbjct: 601  KARQASPTVIFFDEIDSIAPVRGM-SFGNDAAEKVVNQLLTELDGLEEPKDLVIIAATNR 659

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIR------ELACLS 976
            P  IDPALLRPGR DR++ V  P++  R +IF++H   +P  ++          ELA  +
Sbjct: 660  PKLIDPALLRPGRIDRMVLVPAPDKDTRLKIFKVHTANMPLLNNEEEEKNNLLMELAEKT 719

Query: 977  EGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            EG +GADI+ +CREAA+  + ENL+A  I  +    A++ V+PS
Sbjct: 720  EGYSGADIAGVCREAAMITLRENLEAQIIPKESFIKAMKKVKPS 763



 Score =  209 bits (533), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 101/201 (50%), Positives = 135/201 (67%), Gaps = 2/201 (0%)

Query: 768 EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
           +VP V +ED+GG RE   ++ E VE P +H E F R+G  PP G+L+ GPPG  KTL+A+
Sbjct: 170 KVPSVSYEDIGGLREEVKKIREMVELPMRHPELFDRLGIEPPKGVLLAGPPGTGKTLLAK 229

Query: 828 AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
           AVA+E+G N+  + GPE+ SK+VGE+E+ +R +F +A  NAPS+IF DEID +A  R  E
Sbjct: 230 AVANESGANYYTINGPEIMSKYVGETEENLRKIFEEAEENAPSVIFIDEIDAVAPKRD-E 288

Query: 888 SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
             G  V  R+++QLL  LDGL  R  V ++AATNRPD ID AL RPGR DR L +G P+ 
Sbjct: 289 VTG-EVERRMVAQLLTLLDGLENRGQVVILAATNRPDSIDIALRRPGRLDRELTIGIPDR 347

Query: 948 TDREEIFRIHLRKIPCSSDVN 968
             R EI  IH R +P  +D +
Sbjct: 348 NARREILDIHTRSMPLEADYD 368



 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 169/308 (54%), Gaps = 59/308 (19%)

Query: 391 TLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLL 449
           T P  +I+   V +   +DI   GGL +E   +++++ +          LG+ P KGVLL
Sbjct: 160 TEPAGEIKETKVPSVSYEDI---GGLREEVKKIREMVELPMRHPELFDRLGIEPPKGVLL 216

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
            GPPGTGKT LA+  A++SG N +T+NGPE++S+  GE+E+ L ++F+ A ++AP+V+FI
Sbjct: 217 AGPPGTGKTLLAKAVANESGANYYTINGPEIMSKYVGETEENLRKIFEEAEENAPSVIFI 276

Query: 510 DELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
           DE+DA+AP R +   E+ +RMVA LL L+DG+     V+++AATNRPDSI+ ALRRPGRL
Sbjct: 277 DEIDAVAPKRDEVTGEVERRMVAQLLTLLDGLENRGQVVILAATNRPDSIDIALRRPGRL 336

Query: 570 DREIEI--------------------------------DMSFLFS--------------- 582
           DRE+ I                                 +S+L S               
Sbjct: 337 DRELTIGIPDRNARREILDIHTRSMPLEADYDELSLKDGISYLSSSKRKDIDARDKSKTL 396

Query: 583 ----LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
               +    P  V   A+ L I+  L    + +++ S V  L+  THGF GADL+ LC E
Sbjct: 397 QEILISTRDPNLVVEKAKELGIIDKL----DVAIVKSFVRELADKTHGFAGADLSVLCKE 452

Query: 639 AALVCLRR 646
           AA+  LR+
Sbjct: 453 AAMKSLRK 460



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 131/218 (60%), Gaps = 24/218 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + +G+RP KG+LL+G PGTGKT LA+  A++S  N  +V GPE+ S+  G+SE+A+ E+
Sbjct: 539 FTKMGIRPPKGILLYGAPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGDSEKAIREI 598

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q++P V+F DE+D+IAP R    G + ++++V  LL  +DG+     +++IAATN
Sbjct: 599 FKKARQASPTVIFFDEIDSIAPVRGMSFGNDAAEKVVNQLLTELDGLEEPKDLVIIAATN 658

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSL 612
           RP  I+PAL RPGR+DR +                 VP+P +  RL+I     + M    
Sbjct: 659 RPKLIDPALLRPGRIDRMV----------------LVPAPDKDTRLKIFKVHTANMPLLN 702

Query: 613 LDSEVEY-----LSMATHGFVGADLAALCNEAALVCLR 645
            + E +      L+  T G+ GAD+A +C EAA++ LR
Sbjct: 703 NEEEEKNNLLMELAEKTEGYSGADIAGVCREAAMITLR 740


>gi|448330837|ref|ZP_21520113.1| AAA family ATPase [Natrinema versiforme JCM 10478]
 gi|445610673|gb|ELY64442.1| AAA family ATPase [Natrinema versiforme JCM 10478]
          Length = 753

 Score =  293 bits (749), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 143/302 (47%), Positives = 201/302 (66%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG  E K QL E ++WP  + E F+++  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGETKEQLRETIQWPLDYPEVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R+ IF +H R  P +  V++  LA  ++G  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEDARKAIFDVHTRNKPLAESVDLEWLASRTDGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            +++ +   RI+ +H +TA+  V PS        Y++L  +F
Sbjct: 678  REASMAASREFINSVDPEDMDDTIGNVRISREHFETALEEVNPSVAPETREQYEDLEEEF 737

Query: 1033 QR 1034
            Q+
Sbjct: 738  QQ 739



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/267 (43%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVAYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAPSIIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKE 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R+EI ++H R +P    +++ + A  + G  GAD+  + RE+A++A+            
Sbjct: 363  GRKEILQVHTRGMPLHEGIDLDQYAESTHGFVGADLESLARESAMNALRRIRPELDLESE 422

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                + LD+  ++ +  K A++ +QPS
Sbjct: 423  EIDADVLDSLEVSERDFKEALKGIQPS 449



 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/236 (45%), Positives = 151/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++AP+++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGME-HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  H  +D  ++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGMPLHEGID--LDQYAESTHGFVGADLESLARESAMNALRR 412



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 152/275 (55%), Gaps = 22/275 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL +    L++ I            + ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLGETKEQLRETIQWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + EVF+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEI--LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              VP    R  I  +H     +  S+   ++E+L+  T G+VGAD+ A+C EA++   R
Sbjct: 632 --PVPDEDARKAIFDVHTRNKPLAESV---DLEWLASRTDGYVGADIEAVCREASMAASR 686

Query: 646 RYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCS 680
            +       D+  + G +     H +T L++ + S
Sbjct: 687 EFINSVDPEDMDDTIGNVRISREHFETALEEVNPS 721


>gi|116753844|ref|YP_842962.1| AAA family ATPase, CDC48 subfamily protein [Methanosaeta thermophila
            PT]
 gi|116665295|gb|ABK14322.1| AAA family ATPase, CDC48 subfamily [Methanosaeta thermophila PT]
          Length = 719

 Score =  293 bits (749), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 140/289 (48%), Positives = 197/289 (68%), Gaps = 11/289 (3%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF  A   + PSAMREV++E P V W D+GG  + K +LMEAVEWP  + + F+
Sbjct: 419  IEVTMADFMDALRDLEPSAMREVLVESPNVHWSDIGGLAQAKQELMEAVEWPLTYPKLFE 478

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +   PP GIL++GPPG  KTL+A+AVA+E+  NF++VKGPE  SKWVGESE+AVR  F 
Sbjct: 479  HMKASPPKGILLYGPPGTGKTLLAKAVATESQANFISVKGPEFLSKWVGESERAVRETFR 538

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+  AP+++FFDEID +A +R   +    V++RV+SQ+L E+DGL    NV VIAATNR
Sbjct: 539  KAKQAAPAVVFFDEIDAIAPMRSSGAADSHVTERVISQILSEMDGLEPLHNVIVIAATNR 598

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFDR++ +GPP+E  R EI +IH    P + DV++ E+A  +E  +GA
Sbjct: 599  PDIIDPALLRPGRFDRMIEIGPPDEESRLEILKIHTANRPLAEDVDLAEIAKRTENYSGA 658

Query: 983  DISLICREAAISAI-----------EENLDASRITMQHLKTAIRHVQPS 1020
            D++ +C EA + AI           EE +   R+  +H + A++ V+PS
Sbjct: 659  DLAAVCSEAVMLAIREYVLAGKPQDEEAIKNLRVERRHFEEALKKVRPS 707



 Score =  225 bits (574), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 119/267 (44%), Positives = 164/267 (61%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            + +V +ED+GG      ++ E +E P KH E F+R+G   P G+L+ GPPG  KTL+ARA
Sbjct: 172  IQRVTYEDIGGLSAEIKKVREMIELPMKHPELFERLGVEAPKGVLLHGPPGTGKTLLARA 231

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +ASE   +F  + GPE+ SK+ GESE+ +R LF  A  NAPSII  DEID +A  R +E 
Sbjct: 232  LASETNAHFETLSGPEIMSKYYGESEERLRQLFKTAEENAPSIILIDEIDSIAPKR-EEV 290

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL  R  V +I ATNRPD +DPAL RPGRFDR + +G PN  
Sbjct: 291  TG-EVERRVVAQLLALMDGLESRGKVVIIGATNRPDALDPALRRPGRFDREIEIGVPNRD 349

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EI +IH R +P SSDV++ +LA ++ G  GAD++ + REA + A+            
Sbjct: 350  ARLEILQIHTRGMPLSSDVDLGKLADITHGFVGADLAALAREAGMRALRRVLPELDLEVE 409

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E L+   +TM     A+R ++PS
Sbjct: 410  SIPAEILNKIEVTMADFMDALRDLEPS 436



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/279 (43%), Positives = 168/279 (60%), Gaps = 27/279 (9%)

Query: 374 VYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISK-----LGGLSKEYAILKDII- 427
           V + PP +A+    R       +IE     A  E+ I +     +GGLS E   ++++I 
Sbjct: 142 VRITPPRDALVIGDR------TKIEISEKPAKEEKMIQRVTYEDIGGLSAEIKKVREMIE 195

Query: 428 ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGE 487
           +          LG+   KGVLLHGPPGTGKT LAR  A ++  +  T++GPE++S+ YGE
Sbjct: 196 LPMKHPELFERLGVEAPKGVLLHGPPGTGKTLLARALASETNAHFETLSGPEIMSKYYGE 255

Query: 488 SEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGV 547
           SE+ L ++F +A ++AP+++ IDE+D+IAP R++   E+ +R+VA LL LMDG+     V
Sbjct: 256 SEERLRQLFKTAEENAPSIILIDEIDSIAPKREEVTGEVERRVVAQLLALMDGLESRGKV 315

Query: 548 LVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSG 607
           ++I ATNRPD+++PALRRPGR DREIEI               VP+   RLEIL     G
Sbjct: 316 VIIGATNRPDALDPALRRPGRFDREIEI--------------GVPNRDARLEILQIHTRG 361

Query: 608 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           M  S  D ++  L+  THGFVGADLAAL  EA +  LRR
Sbjct: 362 MPLS-SDVDLGKLADITHGFVGADLAALAREAGMRALRR 399



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/207 (45%), Positives = 129/207 (62%), Gaps = 17/207 (8%)

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P KG+LL+GPPGTGKT LA+  A +S  N  +V GPE +S+  GESE+A+ E F  A Q+
Sbjct: 484 PPKGILLYGPPGTGKTLLAKAVATESQANFISVKGPEFLSKWVGESERAVRETFRKAKQA 543

Query: 503 APAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           APAVVF DE+DAIAP R  G  +  +++R+++ +L+ MDG+     V+VIAATNRPD I+
Sbjct: 544 APAVVFFDEIDAIAPMRSSGAADSHVTERVISQILSEMDGLEPLHNVIVIAATNRPDIID 603

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
           PAL RPGR DR IEI                P    RLEIL  + +       D ++  +
Sbjct: 604 PALLRPGRFDRMIEI--------------GPPDEESRLEILK-IHTANRPLAEDVDLAEI 648

Query: 621 SMATHGFVGADLAALCNEAALVCLRRY 647
           +  T  + GADLAA+C+EA ++ +R Y
Sbjct: 649 AKRTENYSGADLAAVCSEAVMLAIREY 675


>gi|116754033|ref|YP_843151.1| AAA family ATPase, CDC48 subfamily protein [Methanosaeta thermophila
            PT]
 gi|116665484|gb|ABK14511.1| AAA family ATPase, CDC48 subfamily [Methanosaeta thermophila PT]
          Length = 756

 Score =  293 bits (749), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 138/278 (49%), Positives = 193/278 (69%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L ++ VDFE A  +++PSA+RE+++EVPKV W+D+GG  +VK  L+EAVEWP ++   FK
Sbjct: 448  LVVQRVDFEAALREIQPSALREIMVEVPKVTWDDIGGLEDVKQLLIEAVEWPLRYASNFK 507

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G   P GIL++GPPG  KT++A+AVA+E+  NF+  KG  L SKW GESEK V  +F 
Sbjct: 508  RLGINAPKGILLYGPPGTGKTMLAKAVANESDANFITAKGSALLSKWYGESEKRVAEIFR 567

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP++IF DE+D L  +RG       V++R+++QLL ELDGL +   V VI ATNR
Sbjct: 568  KARQVAPAVIFLDELDALVPVRGGAVGEPHVTERIVNQLLSELDGLEELHGVVVIGATNR 627

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFD L+ V  P++  R++IF +H R +P + DV+I  L  L+E  TGA
Sbjct: 628  PDIVDPALLRPGRFDELILVPVPDKPSRKKIFEVHTRNMPLAPDVDIDALVELTEHYTGA 687

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            DI+ ICR+A   A+ E++ +  +  +H   AIR + PS
Sbjct: 688  DIAAICRKAGRLALRESMSSEHVRERHFLAAIREIGPS 725



 Score =  249 bits (635), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 128/270 (47%), Positives = 181/270 (67%), Gaps = 17/270 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +EDVGG +   T++ E +E P KH E F R+G  PP GIL++GPPG  KT++A+A
Sbjct: 201  VPSVCYEDVGGLKNAITKVREMIELPLKHPELFDRLGIDPPKGILLYGPPGTGKTMLAKA 260

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E+   F++V GPE+ SK+ GESEKA+R +F +A  NAP+IIF DE+D +A  RG+ +
Sbjct: 261  VANESDAYFISVNGPEIMSKYYGESEKALRDIFEEAEKNAPAIIFLDELDSIAPKRGEVT 320

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V  RV++QLL  +DGL +R NV VI +TNRP+ +D AL RPGRFDR + +G P+  
Sbjct: 321  G--EVERRVVAQLLSLMDGLKERKNVLVIGSTNRPEALDIALRRPGRFDREIELGVPDFE 378

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDA- 1002
             R+EIF+IH R +P + DVNI E A L+ G  GADI+ +CREAA++A+     E +LD  
Sbjct: 379  GRKEIFQIHTRGMPLAEDVNIEEFAELTYGFVGADIAAVCREAAMNALRRILPEIDLDEP 438

Query: 1003 -------SRITMQHL--KTAIRHVQPSEIH 1023
                    R+ +Q +  + A+R +QPS + 
Sbjct: 439  TIPKEILDRLVVQRVDFEAALREIQPSALR 468



 Score =  199 bits (505), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/235 (44%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      ++++I +          LG+ P KG+LL+GPPGTGKT LA+  A++S   
Sbjct: 209 VGGLKNAITKVREMIELPLKHPELFDRLGIDPPKGILLYGPPGTGKTMLAKAVANESDAY 268

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +VNGPE++S+ YGESE+AL ++F+ A ++APA++F+DELD+IAP R +   E+ +R+V
Sbjct: 269 FISVNGPEIMSKYYGESEKALRDIFEEAEKNAPAIIFLDELDSIAPKRGEVTGEVERRVV 328

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     VLVI +TNRP++++ ALRRPGR DREIE+               V
Sbjct: 329 AQLLSLMDGLKERKNVLVIGSTNRPEALDIALRRPGRFDREIEL--------------GV 374

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EI      GM  +  D  +E  +  T+GFVGAD+AA+C EAA+  LRR
Sbjct: 375 PDFEGRKEIFQIHTRGMPLA-EDVNIEEFAELTYGFVGADIAAVCREAAMNALRR 428



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 123/214 (57%), Gaps = 17/214 (7%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           S    LG+   KG+LL+GPPGTGKT LA+  A++S  N  T  G  ++S+ YGESE+ + 
Sbjct: 504 SNFKRLGINAPKGILLYGPPGTGKTMLAKAVANESDANFITAKGSALLSKWYGESEKRVA 563

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           E+F  A Q APAV+F+DELDA+ P R    G   +++R+V  LL+ +DG+    GV+VI 
Sbjct: 564 EIFRKARQVAPAVIFLDELDALVPVRGGAVGEPHVTERIVNQLLSELDGLEELHGVVVIG 623

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD ++PAL RPGR D  I +               VP    R +I       M  +
Sbjct: 624 ATNRPDIVDPALLRPGRFDELILV--------------PVPDKPSRKKIFEVHTRNMPLA 669

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D +++ L   T  + GAD+AA+C +A  + LR
Sbjct: 670 -PDVDIDALVELTEHYTGADIAAICRKAGRLALR 702


>gi|50303471|ref|XP_451677.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640809|emb|CAH02070.1| KLLA0B03234p [Kluyveromyces lactis]
          Length = 804

 Score =  293 bits (749), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 137/294 (46%), Positives = 206/294 (70%), Gaps = 6/294 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + D  +A   +RPSAMRE+ LE PKV W+D+GGQ E+K ++ E ++ P +  E F 
Sbjct: 507  LKVGINDVLEAMADIRPSAMREIFLETPKVYWDDIGGQEELKQKMKEMIQLPLEAAETFA 566

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F 
Sbjct: 567  KLGVSAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFR 626

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID L+  R   S G S ++ V++ LL E+DG+ +   V ++AATNR
Sbjct: 627  KARAASPSIIFFDEIDALSPDRDSGS-GTSAANHVLTSLLNEIDGVEELKGVIIVAATNR 685

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCTG 981
            PD+IDPALLRPGR DR +YVGPP+   R +I +   +K    ++ V+++ LA  ++GC+G
Sbjct: 686  PDEIDPALLRPGRLDRHIYVGPPSYDARLQILQKCTKKFNIDTAIVDLKALAECTDGCSG 745

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            A++ L+C+EA ++AI E+    ++  +H   A+    R + P  +  Y   +A+
Sbjct: 746  AEVVLLCQEAGLAAIMEDTTTDKVEQRHFTKALAGISRGITPEMLEYYSAFAAR 799



 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 102/239 (42%), Positives = 150/239 (62%), Gaps = 19/239 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE +ILK  +          +  G+ P +G+LLHGPPGTGKT L R  A+++  +
Sbjct: 272 VGGLKKETSILKSTVEFPLHQPQLFTDFGINPPRGILLHGPPGTGKTMLLRCVANETDAH 331

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
           + T++GP +VS+  GE+E AL ++F+ A +  P+++FIDE+D++AP R  D   E+  R+
Sbjct: 332 ILTISGPSIVSKYLGETEAALRDIFNEAKRYQPSIIFIDEIDSLAPNRANDDSGEVESRV 391

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           VATLL LMDG+  +  + V+AATNRP+SI+PALRRPGR D+EIEI              +
Sbjct: 392 VATLLTLMDGMDGSGRLAVVAATNRPNSIDPALRRPGRFDQEIEI--------------S 437

Query: 591 VPSPAQRLEILHALLSGM--EHSLLDSE-VEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +P    R +IL    S M  +  LL  E +  ++  THG+VGADL ALC E+ +  ++R
Sbjct: 438 IPDVEARHDILRKQFSRMSKQRQLLSPEDISNIASKTHGYVGADLIALCRESVMKTIQR 496



 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 164/314 (52%), Gaps = 26/314 (8%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +  VGG ++  + L   VE+P    + F   G  PP GIL+ GPPG  KT++ R VA+
Sbjct: 267  VLYNAVGGLKKETSILKSTVEFPLHQPQLFTDFGINPPRGILLHGPPGTGKTMLLRCVAN 326

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   + L + GP + SK++GE+E A+R +F +A+   PSIIF DEID LA  R  +  G 
Sbjct: 327  ETDAHILTISGPSIVSKYLGETEAALRDIFNEAKRYQPSIIFIDEIDSLAPNRANDDSG- 385

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++ LL  +DG+     + V+AATNRP+ IDPAL RPGRFD+ + +  P+   R 
Sbjct: 386  EVESRVVATLLTLMDGMDGSGRLAVVAATNRPNSIDPALRRPGRFDQEIEISIPDVEARH 445

Query: 952  EIFRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIEENL------D 1001
            +I R    ++     +    +I  +A  + G  GAD+  +CRE+ +  I+  L      D
Sbjct: 446  DILRKQFSRMSKQRQLLSPEDISNIASKTHGYVGADLIALCRESVMKTIQRGLNENIERD 505

Query: 1002 ASRITMQHLKTAIRHVQPS---------------EIHSYKELSAKFQRLVHSNAEADESG 1046
              ++ +  +  A+  ++PS               +I   +EL  K + ++    EA E+ 
Sbjct: 506  DLKVGINDVLEAMADIRPSAMREIFLETPKVYWDDIGGQEELKQKMKEMIQLPLEAAETF 565

Query: 1047 YQLRPSKSIGSNMW 1060
             +L  S   G  ++
Sbjct: 566  AKLGVSAPKGVLLY 579



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 88/234 (37%), Positives = 132/234 (56%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG+N
Sbjct: 541 IGGQEELKQKMKEMIQLPLEAAETFAKLGVSAPKGVLLYGPPGCSKTLTAKALATESGIN 600

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRM 530
              V GPE+ ++  GESE+A+ E+F  A  ++P+++F DE+DA++P R  G G   +  +
Sbjct: 601 FLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDALSPDRDSGSGTSAANHV 660

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           + +LLN +DGV    GV+++AATNRPD I+PAL RPGRLDR I +               
Sbjct: 661 LTSLLNEIDGVEELKGVIIVAATNRPDEIDPALLRPGRLDRHIYV--------------G 706

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
            PS   RL+IL              +++ L+  T G  GA++  LC EA L  +
Sbjct: 707 PPSYDARLQILQKCTKKFNIDTAIVDLKALAECTDGCSGAEVVLLCQEAGLAAI 760


>gi|167533167|ref|XP_001748264.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773384|gb|EDQ87025.1| predicted protein [Monosiga brevicollis MX1]
          Length = 880

 Score =  292 bits (748), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 140/248 (56%), Positives = 184/248 (74%), Gaps = 3/248 (1%)

Query: 756  KVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMF 815
            KVRPS MRE+ +EVP+V+WED+GGQ E K QL+EAVEWP K ++ F R G  PP GIL++
Sbjct: 597  KVRPSTMREIAIEVPQVRWEDIGGQTETKRQLIEAVEWPLKRRDDFARFGITPPRGILLY 656

Query: 816  GPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFD 875
            GPPGCSKTLMA+A+A+E+GLNF+AVKGPELFSK+VGESE+AVR  F +ARA AP ++FFD
Sbjct: 657  GPPGCSKTLMAKALATESGLNFIAVKGPELFSKYVGESERAVRETFRRARAAAPCVVFFD 716

Query: 876  EIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGR 935
            EID L     +   G  V DRV+SQLL ELDG+    NVTV+AATNRPD +D ALLRPGR
Sbjct: 717  EIDSLGGK--RGKTGGGVGDRVLSQLLTELDGVTALNNVTVLAATNRPDLVDNALLRPGR 774

Query: 936  FDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA 995
            FDR +YV PP+E  R+ I    L+ +P  +D+++  L   + G +GA+++ + R A++ A
Sbjct: 775  FDRRIYVSPPDEAARQHILARQLQSVP-HADIDVAALVDATAGLSGAEVAALIRSASMRA 833

Query: 996  IEENLDAS 1003
            +  + D S
Sbjct: 834  LVRSADKS 841



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 147/309 (47%), Gaps = 68/309 (22%)

Query: 393 PNAQIEFQN-----VQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKG 446
           PN ++EF +          +   + +GGL ++   LK+++ ++ +       L +RP  G
Sbjct: 276 PNTRLEFVDDIPDLAAGAGDDAFALVGGLEQQITTLKELVMLTLTNPQAYHQLHVRPPTG 335

Query: 447 VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 506
           VL+ GPPGTGKT LAR  A   GV++   +   ++S+  GE+EQ +  +FD A   AP++
Sbjct: 336 VLMTGPPGTGKTLLARTLARACGVHVVLADVTGLISRVAGETEQRITALFDEARSKAPSL 395

Query: 507 VFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV------------------------- 541
           VFIDE+DA+ P R     EL +R+V   L LMDG+                         
Sbjct: 396 VFIDEIDALCPNRAQAASELDRRIVTMFLTLMDGLSARTTSCQIPLACLSRPPRAYQPLT 455

Query: 542 -----------------------CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
                                  C    V+V+AATNRPD+++PALRRPGR DRE+ +   
Sbjct: 456 HHPSNSSPLTHTQKSQLDALPTNCTAAPVVVLAATNRPDALDPALRRPGRFDRELHV--- 512

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                       +P+  QR  IL  LL  + H +  + +  ++   HG+VGADL A+   
Sbjct: 513 -----------GIPTAPQRQAILEVLLQRVPHQVDSATLADVAARAHGYVGADLTAIIAT 561

Query: 639 AALVCLRRY 647
           A    + R+
Sbjct: 562 ARQEAVERH 570



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 134/273 (49%), Gaps = 51/273 (18%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 836
            VGG  +  T L E V     + +A+ ++  RPPTG+LM GPPG  KTL+AR +A   G++
Sbjct: 301  VGGLEQQITTLKELVMLTLTNPQAYHQLHVRPPTGVLMTGPPGTGKTLLARTLARACGVH 360

Query: 837  FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR 896
             +      L S+  GE+E+ + +LF +AR+ APS++F DEID L   R + +    +  R
Sbjct: 361  VVLADVTGLISRVAGETEQRITALFDEARSKAPSLVFIDEIDALCPNRAQAAS--ELDRR 418

Query: 897  VMSQLLVELDGLHQRVN------------------------------------------- 913
            +++  L  +DGL  R                                             
Sbjct: 419  IVTMFLTLMDGLSARTTSCQIPLACLSRPPRAYQPLTHHPSNSSPLTHTQKSQLDALPTN 478

Query: 914  -----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD-V 967
                 V V+AATNRPD +DPAL RPGRFDR L+VG P    R+ I  + L+++P   D  
Sbjct: 479  CTAAPVVVLAATNRPDALDPALRRPGRFDRELHVGIPTAPQRQAILEVLLQRVPHQVDSA 538

Query: 968  NIRELACLSEGCTGADISLICREAAISAIEENL 1000
             + ++A  + G  GAD++ I   A   A+E +L
Sbjct: 539  TLADVAARAHGYVGADLTAIIATARQEAVERHL 571



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 121/214 (56%), Gaps = 16/214 (7%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           +   +  G+ P +G+LL+GPPG  KT +A+  A +SG+N   V GPE+ S+  GESE+A+
Sbjct: 639 RDDFARFGITPPRGILLYGPPGCSKTLMAKALATESGLNFIAVKGPELFSKYVGESERAV 698

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
            E F  A  +AP VVF DE+D++   R   G  +  R+++ LL  +DGV   + V V+AA
Sbjct: 699 RETFRRARAAAPCVVFFDEIDSLGGKRGKTGGGVGDRVLSQLLTELDGVTALNNVTVLAA 758

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD ++ AL RPGR DR I +           SP   P  A R  IL   L  + H+ 
Sbjct: 759 TNRPDLVDNALLRPGRFDRRIYV-----------SP---PDEAARQHILARQLQSVPHA- 803

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            D +V  L  AT G  GA++AAL   A++  L R
Sbjct: 804 -DIDVAALVDATAGLSGAEVAALIRSASMRALVR 836


>gi|408382448|ref|ZP_11179992.1| ATPase AAA [Methanobacterium formicicum DSM 3637]
 gi|407814803|gb|EKF85426.1| ATPase AAA [Methanobacterium formicicum DSM 3637]
          Length = 761

 Score =  292 bits (748), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 136/305 (44%), Positives = 200/305 (65%), Gaps = 9/305 (2%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  +   + PSA+REV +EVP V W D+GG +E+K  L E VEWP  +  +F+RIG +P
Sbjct: 456  DFIDSMKSISPSALREVFIEVPNVHWRDIGGLQELKESLKEVVEWPLSNISSFQRIGIQP 515

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              GIL+FGPPG  KTL+ +AVA+E+  NF++VKG E+ SKW GESE+ +  +F KA+  +
Sbjct: 516  SKGILLFGPPGTGKTLLTKAVATESKANFISVKGSEILSKWFGESERKIAEIFKKAKQAS 575

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P IIFFDE+D +A +RG  +    V++R+++ +L E+DGL +   V VI ATNRPD +DP
Sbjct: 576  PCIIFFDEVDAIAPVRGSAAGEPRVTERMVNTILSEMDGLEELRGVVVIGATNRPDLMDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD ++ V PP+E  R++I ++H+  +    DV I+ELA  +EG TGADI ++C
Sbjct: 636  ALLRPGRFDEVVLVPPPDENARKDILKVHVEHMALDDDVKIKELAKKTEGYTGADIEVLC 695

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQ 1048
            R+A + A+ E++D  +++ +H K A++ + PS     +E   +  R         E G  
Sbjct: 696  RKAGMIALHEDMDIQKVSYRHFKAALKKINPSTTPKTREYYEQIAR---------ELGRG 746

Query: 1049 LRPSK 1053
            L P K
Sbjct: 747  LEPKK 751



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/247 (47%), Positives = 169/247 (68%), Gaps = 2/247 (0%)

Query: 754  RMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGIL 813
            +++VRP A+     ++P V ++DVGG ++  +++ E +E P +H E F R+G  PP G+L
Sbjct: 188  QVEVRPEAVEVTEKKIPDVTYDDVGGLKKEISKVREMIELPLRHPEIFDRLGIDPPKGVL 247

Query: 814  MFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIF 873
            + G PG  KTL+A+AVASE+G NF+A+ GPE+ SK+VGE+EK +R +F +A  NAP++IF
Sbjct: 248  LHGAPGTGKTLLAKAVASESGSNFVAINGPEVMSKFVGEAEKKIREIFEEAAENAPTVIF 307

Query: 874  FDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRP 933
             DEID +A  R +E  G  V  RV++Q+L  +DGL +R  V VI ATNRPD +D AL RP
Sbjct: 308  IDEIDAIAPKR-EEVTG-EVERRVVAQILALMDGLKERGKVIVIGATNRPDALDQALRRP 365

Query: 934  GRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAI 993
            GRFDR + +  P+   R EI  IH R +P S DVNI +LA  + G  GAD++ +CREAA+
Sbjct: 366  GRFDREIELRVPDREGRMEILEIHTRAMPLSDDVNIDKLAETTHGFVGADLAALCREAAM 425

Query: 994  SAIEENL 1000
            +A+   L
Sbjct: 426  NALRRVL 432



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 112/235 (47%), Positives = 152/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE + ++++I +          LG+ P KGVLLHG PGTGKT LA+  A +SG N
Sbjct: 211 VGGLKKEISKVREMIELPLRHPEIFDRLGIDPPKGVLLHGAPGTGKTLLAKAVASESGSN 270

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +NGPEV+S+  GE+E+ + E+F+ A+++AP V+FIDE+DAIAP R++   E+ +R+V
Sbjct: 271 FVAINGPEVMSKFVGEAEKKIREIFEEAAENAPTVIFIDEIDAIAPKREEVTGEVERRVV 330

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A +L LMDG+     V+VI ATNRPD+++ ALRRPGR DREIE+               V
Sbjct: 331 AQILALMDGLKERGKVIVIGATNRPDALDQALRRPGRFDREIEL--------------RV 376

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R+EIL      M  S  D  ++ L+  THGFVGADLAALC EAA+  LRR
Sbjct: 377 PDREGRMEILEIHTRAMPLS-DDVNIDKLAETTHGFVGADLAALCREAAMNALRR 430



 Score =  174 bits (440), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/317 (35%), Positives = 169/317 (53%), Gaps = 46/317 (14%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL  +R  P++ + +   SN F+ +               KS+    L    IE  NV  
Sbjct: 436 DLQEQRIAPEILDKLFVTSNDFIDSM--------------KSISPSALREVFIEVPNVHW 481

Query: 405 TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
              +DI   GGL +    LK+++    S  S+   +G++P+KG+LL GPPGTGKT L + 
Sbjct: 482 ---RDI---GGLQELKESLKEVVEWPLSNISSFQRIGIQPSKGILLFGPPGTGKTLLTKA 535

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG 523
            A +S  N  +V G E++S+ +GESE+ + E+F  A Q++P ++F DE+DAIAP R    
Sbjct: 536 VATESKANFISVKGSEILSKWFGESERKIAEIFKKAKQASPCIIFFDEVDAIAPVRGSAA 595

Query: 524 EE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
            E  +++RMV T+L+ MDG+    GV+VI ATNRPD ++PAL RPGR D  +        
Sbjct: 596 GEPRVTERMVNTILSEMDGLEELRGVVVIGATNRPDLMDPALLRPGRFDEVV-------- 647

Query: 582 SLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCN 637
                    VP P +  R +IL      +EH  LD +V+   +A  T G+ GAD+  LC 
Sbjct: 648 --------LVPPPDENARKDILKV---HVEHMALDDDVKIKELAKKTEGYTGADIEVLCR 696

Query: 638 EAALVCLRRYSKIQTSS 654
           +A ++ L     IQ  S
Sbjct: 697 KAGMIALHEDMDIQKVS 713


>gi|448346299|ref|ZP_21535185.1| AAA family ATPase [Natrinema altunense JCM 12890]
 gi|445632888|gb|ELY86094.1| AAA family ATPase [Natrinema altunense JCM 12890]
          Length = 753

 Score =  292 bits (748), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 144/302 (47%), Positives = 199/302 (65%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG  + K QL E ++WP  + E F+++  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGDTKEQLRETIQWPLDYPEVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R+ IF +H R  P +  V++  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEDARKAIFEVHTRNKPLAESVDLEWLAGETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            REA+++A            +++ +   RI  QH + A+  V PS        Y+EL  +F
Sbjct: 678  REASMAASREFINSVEPEEMDDTIGNVRIGKQHFEHALEEVNPSVSPDTREQYEELEDEF 737

Query: 1033 QR 1034
            Q+
Sbjct: 738  QQ 739



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 170/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVAYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   NF  + GPE+ SK+ GESE+ +R +F +A  NAPSIIF DE+D +AA R  E 
Sbjct: 245  VANEIDANFETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKE 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R+EI ++H R +P   ++++ + A  + G  GAD+  + RE+A++A+            
Sbjct: 363  GRKEILQVHTRGMPLDEEIDLDQYAESTHGFVGADLESLARESAMNALRRIRPELDLESE 422

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                + LD+  ++ +  K A++ +QPS
Sbjct: 423  EIDADVLDSLEVSERDFKEALKGIQPS 449



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/237 (46%), Positives = 150/237 (63%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAN 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++AP+++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM    LD E++    A  THGFVGADL +L  E+A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGMP---LDEEIDLDQYAESTHGFVGADLESLARESAMNALRR 412



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 138/242 (57%), Gaps = 22/242 (9%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            + ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLGDTKEQLRETIQWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + EVF+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEI--LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              VP    R  I  +H     +  S+   ++E+L+  T G+VGAD+ A+C EA++   R
Sbjct: 632 --PVPDEDARKAIFEVHTRNKPLAESV---DLEWLAGETEGYVGADIEAVCREASMAASR 686

Query: 646 RY 647
            +
Sbjct: 687 EF 688


>gi|146420643|ref|XP_001486276.1| hypothetical protein PGUG_01947 [Meyerozyma guilliermondii ATCC 6260]
          Length = 768

 Score =  292 bits (748), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 139/293 (47%), Positives = 205/293 (69%), Gaps = 6/293 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +KL + D E+A +++RPSAMRE+ LE+PKV W D+GGQ E+K +L+E V+ P +    F 
Sbjct: 473  IKLYIDDVEEALLEIRPSAMREIFLEMPKVYWSDIGGQEELKRKLVEVVQLPLEATSTFA 532

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G   P G+L++GPPGCSKTL A+A+A+E GLNFLAVKGPE+F+K+VGESE+ +R +F 
Sbjct: 533  NLGVLAPRGVLLYGPPGCSKTLTAKALATELGLNFLAVKGPEIFNKYVGESERTIREIFR 592

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID ++  R  +S   S + +V++ LL E+DG+ +   V ++AATNR
Sbjct: 593  KARAASPSIIFFDEIDAISGDR--DSASTSAALQVLTTLLNEIDGVEELNGVVIVAATNR 650

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            P +IDPALLRPGR DR +YV PP+   R +I +    K      V++ E+A L+EGC+GA
Sbjct: 651  PTEIDPALLRPGRLDRHIYVAPPDFEARLQILQTRTAKFNLPESVSLAEIAELTEGCSGA 710

Query: 983  DISLICREAAISAIEENLDASRITMQH----LKTAIRHVQPSEIHSYKELSAK 1031
            +++L+ +EA ++A+ EN  A+R+  +H    LK   R +    +  Y+E +A+
Sbjct: 711  EVALVSQEAGLAAVMENKRATRVEKRHFDHALKGVSRGITEDMLDYYREFAAR 763



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 151/245 (61%), Gaps = 19/245 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE ++L+ II +  +     +  G+ P +GVLLHGPPGTGKT L R  A++   +
Sbjct: 238 IGGLDKEISLLRSIIEVPLNNPGLFAEFGIAPPRGVLLHGPPGTGKTMLLRSVANEVDAH 297

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRM 530
           +  VNGP +VS+  GE+E AL E+F  A Q  P+++F+DE+D++AP R  D   E   R+
Sbjct: 298 VLAVNGPSIVSKYLGETENALREIFLEARQYQPSIIFMDEIDSLAPNRNSDDSGETESRV 357

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           VATLL +MDG+  +  V+VI ATNRP+S++PALRRPGR D+E+EI               
Sbjct: 358 VATLLTMMDGMGESGRVVVIGATNRPNSLDPALRRPGRFDQEVEI--------------G 403

Query: 591 VPSPAQRLEILHALLSGM--EHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +P    RL+IL      M  E   L++ ++  +++ THG+VGADL ALC E+ +  + R 
Sbjct: 404 IPDVNARLDILSKQFGKMSKEKCCLEAKDISAVALKTHGYVGADLTALCRESVMKAINRG 463

Query: 648 SKIQT 652
            K  T
Sbjct: 464 KKTDT 468



 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 146/258 (56%), Gaps = 11/258 (4%)

Query: 776  DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGL 835
            ++GG  +  + L   +E P  +   F   G  PP G+L+ GPPG  KT++ R+VA+E   
Sbjct: 237  NIGGLDKEISLLRSIIEVPLNNPGLFAEFGIAPPRGVLLHGPPGTGKTMLLRSVANEVDA 296

Query: 836  NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 895
            + LAV GP + SK++GE+E A+R +F +AR   PSIIF DEID LA  R  +  G + S 
Sbjct: 297  HVLAVNGPSIVSKYLGETENALREIFLEARQYQPSIIFMDEIDSLAPNRNSDDSGETES- 355

Query: 896  RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFR 955
            RV++ LL  +DG+ +   V VI ATNRP+ +DPAL RPGRFD+ + +G P+   R +I  
Sbjct: 356  RVVATLLTMMDGMGESGRVVVIGATNRPNSLDPALRRPGRFDQEVEIGIPDVNARLDILS 415

Query: 956  IHLRKIP----CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS------RI 1005
                K+     C    +I  +A  + G  GAD++ +CRE+ + AI             ++
Sbjct: 416  KQFGKMSKEKCCLEAKDISAVALKTHGYVGADLTALCRESVMKAINRGKKTDTPQGDIKL 475

Query: 1006 TMQHLKTAIRHVQPSEIH 1023
             +  ++ A+  ++PS + 
Sbjct: 476  YIDDVEEALLEIRPSAMR 493



 Score =  142 bits (359), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 22/223 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           ST ++LG+   +GVLL+GPPG  KT  A+  A + G+N   V GPE+ ++  GESE+ + 
Sbjct: 529 STFANLGVLAPRGVLLYGPPGCSKTLTAKALATELGLNFLAVKGPEIFNKYVGESERTIR 588

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           E+F  A  ++P+++F DE+DAI+  R       + +++ TLLN +DGV   +GV+++AAT
Sbjct: 589 EIFRKARAASPSIIFFDEIDAISGDRDSASTSAALQVLTTLLNEIDGVEELNGVVIVAAT 648

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS--GMEHS 611
           NRP  I+PAL RPGRLDR I +              A P    RL+IL    +   +  S
Sbjct: 649 NRPTEIDPALLRPGRLDRHIYV--------------APPDFEARLQILQTRTAKFNLPES 694

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCL---RRYSKIQ 651
           +  +E+  L   T G  GA++A +  EA L  +   +R ++++
Sbjct: 695 VSLAEIAEL---TEGCSGAEVALVSQEAGLAAVMENKRATRVE 734


>gi|448535666|ref|ZP_21622186.1| ATPase AAA [Halorubrum hochstenium ATCC 700873]
 gi|445703167|gb|ELZ55102.1| ATPase AAA [Halorubrum hochstenium ATCC 700873]
          Length = 755

 Score =  292 bits (748), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 144/302 (47%), Positives = 200/302 (66%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   + PSA+REV +EVP V W+DVGG    K +L E ++WP ++ E F+ +  + 
Sbjct: 439  DFKEAIKGIEPSALREVFVEVPDVTWDDVGGLEGTKERLRETIQWPLEYPEVFEELDMQA 498

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+E+  NF+++KGPEL +K+VGESEK VR +F+KAR NA
Sbjct: 499  AKGVLMYGPPGTGKTLLAKAVANESESNFISIKGPELLNKYVGESEKGVREVFSKARENA 558

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+FFDEID +A  RGK S    V +RV+SQLL ELDGL    +V VIA TNRPD ID 
Sbjct: 559  PTIVFFDEIDSIATERGKNSGDSGVGERVVSQLLTELDGLESLEDVVVIATTNRPDLIDS 618

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+ET R  IF +H R  P + DV++  LA  ++G  GADI  + 
Sbjct: 619  ALLRPGRLDRHVHVPVPDETARRRIFEVHTRDKPLADDVDLDALARKTDGYVGADIEAVA 678

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            + E++   R+TMQH + A+  V PS        Y+E+  +F
Sbjct: 679  REASMNASREFIGSVSREEVGESVGNVRVTMQHFEDALSEVNPSVTPETRERYEEIEKQF 738

Query: 1033 QR 1034
            +R
Sbjct: 739  KR 740



 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 162/266 (60%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 187  PDVTYEDIGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAV 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   NF  + GPE+ SK+ GESE+ +R +F +A   +P+IIF DE+D +A  R  E  
Sbjct: 247  ANEIDANFHTISGPEIMSKYYGESEEQLREVFEEASEESPAIIFMDELDSIAPKR--EEA 304

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + VG P+   
Sbjct: 305  GGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEVGVPDRNG 364

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P +  +++ E A  + G  GAD+  + +E+A+ A+           + 
Sbjct: 365  RKEILQVHTRNMPLADGIDLDEYAENTHGFVGADLESLAKESAMHALRRIRPEIDLESDE 424

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K AI+ ++PS
Sbjct: 425  IDADVLNSIQVTEADFKEAIKGIEPS 450



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/236 (44%), Positives = 149/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 194 IGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAN 253

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ AS+ +PA++F+DELD+IAP R++ G ++ +R+V
Sbjct: 254 FHTISGPEIMSKYYGESEEQLREVFEEASEESPAIIFMDELDSIAPKREEAGGDVERRVV 313

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIE+               V
Sbjct: 314 AQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEV--------------GV 359

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL      M   L D  +++  +  THGFVGADL +L  E+A+  LRR
Sbjct: 360 PDRNGRKEILQVHTRNM--PLADGIDLDEYAENTHGFVGADLESLAKESAMHALRR 413



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 146/258 (56%), Gaps = 21/258 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               L ++  KGVL++GPPGTGKT LA+  A++S  N  ++ GPE++++  GESE+ + E
Sbjct: 490 VFEELDMQAAKGVLMYGPPGTGKTLLAKAVANESESNFISIKGPELLNKYVGESEKGVRE 549

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR-KDGGEE-LSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP +VF DE+D+IA  R K+ G+  + +R+V+ LL  +DG+   + V+VIA 
Sbjct: 550 VFSKARENAPTIVFFDEIDSIATERGKNSGDSGVGERVVSQLLTELDGLESLEDVVVIAT 609

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  I    +   +  L
Sbjct: 610 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDETARRRIFE--VHTRDKPL 653

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSD 671
            D  +++ L+  T G+VGAD+ A+  EA++   R +    +  +V  S G +     H +
Sbjct: 654 ADDVDLDALARKTDGYVGADIEAVAREASMNASREFIGSVSREEVGESVGNVRVTMQHFE 713

Query: 672 TMLQDSDCSRNITESSRD 689
             L  S+ + ++T  +R+
Sbjct: 714 DAL--SEVNPSVTPETRE 729


>gi|432329094|ref|YP_007247238.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum sp. MAR08-339]
 gi|432135803|gb|AGB05072.1| AAA family ATPase, CDC48 subfamily [Aciduliprofundum sp. MAR08-339]
          Length = 738

 Score =  292 bits (748), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 138/303 (45%), Positives = 210/303 (69%), Gaps = 7/303 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K++  DF++A  ++ PS +REV++E+P V W+++G   E K  L EA+E P K  + FK
Sbjct: 433  MKVKREDFKEALKEIEPSVLREVMIEIPSVHWDEIGDLEEAKRVLKEAIELPLKEPQKFK 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G RP  G+L++GPPG  KTL+A+AVA+E+  NF+++KGPE+ SKWVGESEKA+R +F 
Sbjct: 493  EMGIRPSKGVLLYGPPGTGKTLLAKAVATESEANFISIKGPEVMSKWVGESEKAIREIFK 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+ ++P I+F DEID +A  RG  + G  V++R+++QLL  +DGL +   V VIAATNR
Sbjct: 553  KAKQSSPCIVFLDEIDSIAPRRGYYA-GSGVTERIVNQLLTSMDGLTKMEGVVVIAATNR 611

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGR DR++Y+ PP+E  R EI ++H R +P S DV++ ++A  +E  TGA
Sbjct: 612  PDIVDPALLRPGRIDRIVYIPPPDEKARLEILKVHTRNMPLSEDVSLEKIAGETEFYTGA 671

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHS 1038
            D+  +CREA ++AI E  D+ ++ M+H + A++ V PS     I  Y+ +  +  + V +
Sbjct: 672  DLENLCREAGMAAIRE--DSEKVGMKHFEEALKIVHPSLDKETIKYYENIGLELSKGVKT 729

Query: 1039 NAE 1041
              E
Sbjct: 730  KKE 732



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 118/268 (44%), Positives = 170/268 (63%), Gaps = 21/268 (7%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG      ++ E +E P KH E F+R+G  PP G+L++GPPG  KTL+A+AVA+
Sbjct: 185  VTYEDIGGLESELQKVREMIELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLIAKAVAN 244

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  NF A+ GPE+ SK+ G+SE+ +R +F KA+ NAPSIIF DEID +A  R +E  G 
Sbjct: 245  ESNANFYAINGPEIMSKFYGQSEQRLRDIFQKAQKNAPSIIFIDEIDSIAPKR-EEVTG- 302

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL +R ++ VI ATNR D IDPAL RPGRFDR + +G P++  R+
Sbjct: 303  EVERRVVAQLLTLMDGLSRRGHIIVIGATNRIDAIDPALRRPGRFDREIEIGIPDKKGRK 362

Query: 952  EIFRIHLRKIPCSS-----DVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
            EI +IH R +P        D  + ELA L+ G  GAD++ + REAA+ A+          
Sbjct: 363  EILQIHTRGMPIEGTPEDRDKLLEELAELTHGFVGADLAALAREAAMKALRRYLPQIDLD 422

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+  ++  +  K A++ ++PS
Sbjct: 423  KPVPTEILENMKVKREDFKEALKEIEPS 450



 Score =  213 bits (543), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/240 (46%), Positives = 155/240 (64%), Gaps = 19/240 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLL+GPPGTGKT +A+  A++S  N
Sbjct: 190 IGGLESELQKVREMIELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLIAKAVANESNAN 249

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            + +NGPE++S+ YG+SEQ L ++F  A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 250 FYAINGPEIMSKFYGQSEQRLRDIFQKAQKNAPSIIFIDEIDSIAPKREEVTGEVERRVV 309

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+ R   ++VI ATNR D+I+PALRRPGR DREIEI               +
Sbjct: 310 AQLLTLMDGLSRRGHIIVIGATNRIDAIDPALRRPGRFDREIEI--------------GI 355

Query: 592 PSPAQRLEILHALLSGM--EHSLLDSE--VEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL     GM  E +  D +  +E L+  THGFVGADLAAL  EAA+  LRRY
Sbjct: 356 PDKKGRKEILQIHTRGMPIEGTPEDRDKLLEELAELTHGFVGADLAALAREAAMKALRRY 415



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 144/240 (60%), Gaps = 17/240 (7%)

Query: 412 KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           ++G L +   +LK+ I +          +G+RP+KGVLL+GPPGTGKT LA+  A +S  
Sbjct: 466 EIGDLEEAKRVLKEAIELPLKEPQKFKEMGIRPSKGVLLYGPPGTGKTLLAKAVATESEA 525

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQR 529
           N  ++ GPEV+S+  GESE+A+ E+F  A QS+P +VF+DE+D+IAP R    G  +++R
Sbjct: 526 NFISIKGPEVMSKWVGESEKAIREIFKKAKQSSPCIVFLDEIDSIAPRRGYYAGSGVTER 585

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL  MDG+ + +GV+VIAATNRPD ++PAL RPGR+DR + I              
Sbjct: 586 IVNQLLTSMDGLTKMEGVVVIAATNRPDIVDPALLRPGRIDRIVYI-------------- 631

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
             P    RLEIL      M  S  D  +E ++  T  + GADL  LC EA +  +R  S+
Sbjct: 632 PPPDEKARLEILKVHTRNMPLS-EDVSLEKIAGETEFYTGADLENLCREAGMAAIREDSE 690


>gi|383318709|ref|YP_005379550.1| AAA ATPase [Methanocella conradii HZ254]
 gi|379320079|gb|AFC99031.1| AAA family ATPase, CDC48 subfamily [Methanocella conradii HZ254]
          Length = 760

 Score =  292 bits (747), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 138/309 (44%), Positives = 208/309 (67%), Gaps = 6/309 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DFE+A   ++PSA+RE+++EVP V W+D+GG  EVK  L EAVEWP ++ ++F+
Sbjct: 453  LRVSRHDFEEALKIIQPSALREIMIEVPNVTWDDIGGLTEVKMLLREAVEWPLRYADSFR 512

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G   P G+L++GPPG  KTL+A+A+A+E+  NF+  KG +L SKW GESEK +  +F 
Sbjct: 513  RVGVEAPKGVLLYGPPGTGKTLLAKAIANESQANFITAKGSDLLSKWYGESEKHISEVFK 572

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+I+F DE+D LA +RG  +    V++R+++QLL ELDGL +   V VI ATNR
Sbjct: 573  KARQVAPAIVFLDELDALAPVRGSAAGEPRVTERIVNQLLSELDGLEELRGVIVIGATNR 632

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFD ++ V  P+   R EIF++H+R++P + DV + EL   ++  TGA
Sbjct: 633  PDIIDPALLRPGRFDEIILVPVPDRGARREIFKVHMRQMPVAEDVVLNELVDRTDNFTGA 692

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHS 1038
            DI+ +C++A   A+ E+L+A  +  +H   A++  +PS     +  Y+ +  + +R   S
Sbjct: 693  DIASVCKKAGRLALREDLNAVVVRRKHFMEALKLTEPSVTEEMVRYYQNIGGELKR--KS 750

Query: 1039 NAEADESGY 1047
              E + S Y
Sbjct: 751  AREIERSMY 759



 Score =  236 bits (601), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 120/288 (41%), Positives = 184/288 (63%), Gaps = 17/288 (5%)

Query: 751  EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
            E   +++ P A   +  EVP+V +ED+GG R+   ++ E +E P K+ E F+R+G  PP 
Sbjct: 188  EVTEIQLLPEATEVIKSEVPEVTYEDLGGIRDAIIKIREMIELPLKYPELFQRLGIDPPR 247

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            G+L+ GPPG  KTL+A+AVA+E+   F ++ GPE+ SK+ GESE+ +R +F +A +NAP+
Sbjct: 248  GVLILGPPGTGKTLLAKAVANESDAYFTSINGPEIMSKYYGESEQHLRDVFKEAESNAPA 307

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            IIF DE+D +A  R + +    V  RV++QLL  +DGL  R NV VI ATNRP+ ID AL
Sbjct: 308  IIFIDELDSIATKRAEVTG--EVERRVVAQLLSLMDGLKTRKNVIVIGATNRPEAIDTAL 365

Query: 931  LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICRE 990
             RPGRFDR + +  P+++ R+EIF+IH R +P + DV++ ELA  + G  GADI+ +C+E
Sbjct: 366  RRPGRFDREIELRVPDKSGRKEIFQIHTRSMPLTPDVDLDELADRTYGFVGADIAALCKE 425

Query: 991  AAISAI---------------EENLDASRITMQHLKTAIRHVQPSEIH 1023
            AA++ +                E L+  R++    + A++ +QPS + 
Sbjct: 426  AAMNVLRRVLPSIDLKEQALPREILERLRVSRHDFEEALKIIQPSALR 473



 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGG+      ++++I +          LG+ P +GVL+ GPPGTGKT LA+  A++S   
Sbjct: 214 LGGIRDAIIKIREMIELPLKYPELFQRLGIDPPRGVLILGPPGTGKTLLAKAVANESDAY 273

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             ++NGPE++S+ YGESEQ L +VF  A  +APA++FIDELD+IA  R +   E+ +R+V
Sbjct: 274 FTSINGPEIMSKYYGESEQHLRDVFKEAESNAPAIIFIDELDSIATKRAEVTGEVERRVV 333

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNRP++I+ ALRRPGR DREIE+               V
Sbjct: 334 AQLLSLMDGLKTRKNVIVIGATNRPEAIDTALRRPGRFDREIEL--------------RV 379

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P  + R EI       M  +  D +++ L+  T+GFVGAD+AALC EAA+  LRR
Sbjct: 380 PDKSGRKEIFQIHTRSMPLT-PDVDLDELADRTYGFVGADIAALCKEAAMNVLRR 433



 Score =  159 bits (402), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 137/239 (57%), Gaps = 24/239 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL++   +L++ +        +   +G+   KGVLL+GPPGTGKT LA+  A++S  N
Sbjct: 487 IGGLTEVKMLLREAVEWPLRYADSFRRVGVEAPKGVLLYGPPGTGKTLLAKAIANESQAN 546

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             T  G +++S+ YGESE+ + EVF  A Q APA+VF+DELDA+AP R     E  +++R
Sbjct: 547 FITAKGSDLLSKWYGESEKHISEVFKKARQVAPAIVFLDELDALAPVRGSAAGEPRVTER 606

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL+ +DG+    GV+VI ATNRPD I+PAL RPGR D  I +              
Sbjct: 607 IVNQLLSELDGLEELRGVIVIGATNRPDIIDPALLRPGRFDEIILV-------------- 652

Query: 590 AVPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            VP    R EI    +  M   E  +L+  V+     T  F GAD+A++C +A  + LR
Sbjct: 653 PVPDRGARREIFKVHMRQMPVAEDVVLNELVDR----TDNFTGADIASVCKKAGRLALR 707


>gi|448527716|ref|XP_003869562.1| Afg2 protein [Candida orthopsilosis Co 90-125]
 gi|380353915|emb|CCG23427.1| Afg2 protein [Candida orthopsilosis]
          Length = 756

 Score =  291 bits (746), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 135/275 (49%), Positives = 199/275 (72%), Gaps = 1/275 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+ L D  +A  ++RPSAMRE+ LE+PKV W D+GGQ E+K +L+E V+ P +   +F 
Sbjct: 458  IKVTLDDLLEALGEIRPSAMREIFLEMPKVYWSDIGGQEELKKKLVEVVQLPLEASASFA 517

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G   P G+L++GPPGCSKTL A+A+A+E+GLNFLA+KGPE+F+K+VGESE+ +R +F 
Sbjct: 518  KLGVNAPKGVLLYGPPGCSKTLTAKALATESGLNFLAIKGPEVFNKYVGESERTIREIFR 577

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA APSIIF DEID LA+ R  +S G S S  V++ LL E+DG+ +   V +I ATN+
Sbjct: 578  KARAAAPSIIFLDEIDALASDRDGDSGGTSASKNVLTSLLNEIDGVEELKGVVIIGATNK 637

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            P +ID ALLRPGR DR +YV PP+   R +I     RK     +V++ + A L++GC+GA
Sbjct: 638  PTEIDSALLRPGRLDRHIYVAPPDYDARLQILTKCCRKFDL-VEVDLTKYAKLTDGCSGA 696

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHV 1017
            +++L+C+EA ++AI E+ DA R+  +H + A++ +
Sbjct: 697  EVTLLCQEAGLNAIMEDRDAQRVETRHFEHALQGI 731



 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/241 (40%), Positives = 150/241 (62%), Gaps = 19/241 (7%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S++GGL+K+  +LK  I       TL S  G+ P +G+LL+GPPGTGKT L R  A+++ 
Sbjct: 221 SQVGGLAKQTGLLKSTIQLPLHNPTLFSDFGISPPRGILLYGPPGTGKTMLLRCAANETN 280

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQ 528
            ++ T+NGP +VS+  GE+E A+ E+F+ A+Q  P+++F+DE+D++ P+R  D   E   
Sbjct: 281 AHILTINGPSIVSKYLGETENAIREIFEEAAQFQPSIIFMDEIDSLVPSRNSDDSGETES 340

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+VATLL +MDG+  +  ++V+ ATNRP++I+ ALRRPGR D+EIEI             
Sbjct: 341 RVVATLLTMMDGMDNSGRIVVVGATNRPNAIDIALRRPGRFDQEIEI------------- 387

Query: 589 AAVPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             +P    R +IL      M   ++ L   ++  ++  THG+VGADL ALC EA +  + 
Sbjct: 388 -GIPDVEARQDILQKQFDKMNKNKYELSAEDIALVATKTHGYVGADLTALCREAVMKAIN 446

Query: 646 R 646
           R
Sbjct: 447 R 447



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 150/275 (54%), Gaps = 12/275 (4%)

Query: 756  KVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMF 815
            +  PS  +  +L  P   +  VGG  +    L   ++ P  +   F   G  PP GIL++
Sbjct: 203  ETEPSITKYPLLPRPP-SFSQVGGLAKQTGLLKSTIQLPLHNPTLFSDFGISPPRGILLY 261

Query: 816  GPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFD 875
            GPPG  KT++ R  A+E   + L + GP + SK++GE+E A+R +F +A    PSIIF D
Sbjct: 262  GPPGTGKTMLLRCAANETNAHILTINGPSIVSKYLGETENAIREIFEEAAQFQPSIIFMD 321

Query: 876  EIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGR 935
            EID L   R  +  G + S RV++ LL  +DG+     + V+ ATNRP+ ID AL RPGR
Sbjct: 322  EIDSLVPSRNSDDSGETES-RVVATLLTMMDGMDNSGRIVVVGATNRPNAIDIALRRPGR 380

Query: 936  FDRLLYVGPPNETDREEIFRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREA 991
            FD+ + +G P+   R++I +    K+  +    S  +I  +A  + G  GAD++ +CREA
Sbjct: 381  FDQEIEIGIPDVEARQDILQKQFDKMNKNKYELSAEDIALVATKTHGYVGADLTALCREA 440

Query: 992  AISAIEENL------DASRITMQHLKTAIRHVQPS 1020
             + AI   L      +  ++T+  L  A+  ++PS
Sbjct: 441  VMKAINRGLASGTPQEKIKVTLDDLLEALGEIRPS 475



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 121/210 (57%), Gaps = 18/210 (8%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           ++ + LG+   KGVLL+GPPG  KT  A+  A +SG+N   + GPEV ++  GESE+ + 
Sbjct: 514 ASFAKLGVNAPKGVLLYGPPGCSKTLTAKALATESGLNFLAIKGPEVFNKYVGESERTIR 573

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           E+F  A  +AP+++F+DE+DA+A  R    GG   S+ ++ +LLN +DGV    GV++I 
Sbjct: 574 EIFRKARAAAPSIIFLDEIDALASDRDGDSGGTSASKNVLTSLLNEIDGVEELKGVVIIG 633

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATN+P  I+ AL RPGRLDR I +              A P    RL+IL       +  
Sbjct: 634 ATNKPTEIDSALLRPGRLDRHIYV--------------APPDYDARLQILTKCCRKFD-- 677

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAAL 641
           L++ ++   +  T G  GA++  LC EA L
Sbjct: 678 LVEVDLTKYAKLTDGCSGAEVTLLCQEAGL 707


>gi|365991076|ref|XP_003672367.1| hypothetical protein NDAI_0J02320 [Naumovozyma dairenensis CBS 421]
 gi|343771142|emb|CCD27124.1| hypothetical protein NDAI_0J02320 [Naumovozyma dairenensis CBS 421]
          Length = 778

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 135/294 (45%), Positives = 209/294 (71%), Gaps = 6/294 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + D E A +++RPSAMRE+ LE+PKV W D+GGQ E+K ++ E ++ P +    F 
Sbjct: 481  LKVTMNDVENAMIEIRPSAMREIFLEMPKVFWSDIGGQEELKRKMKEMIQLPLEASATFA 540

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F 
Sbjct: 541  RLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEVFNKYVGESERAIREIFR 600

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID L+  R   S   S +  V++ LL E+DG+ +   V ++AATNR
Sbjct: 601  KARAASPSIIFFDEIDALSPDRDGGS-STSAASHVLTSLLNEIDGVEELKGVVIVAATNR 659

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCTG 981
            PD+IDPALLRPGR DR +YV PP+   R +I +   +K    ++++ + +LA  + GC+G
Sbjct: 660  PDEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCTKKFQIENTNIKLEDLAERTAGCSG 719

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            A++ L+C+EA ++AI E+L+ ++++ +H + A+    R + P  +  Y++ + +
Sbjct: 720  AEVVLLCQEAGLAAIMEDLECTKVSPEHFEKALAGISRGITPEMLAYYEDFARR 773



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/295 (39%), Positives = 174/295 (58%), Gaps = 36/295 (12%)

Query: 374 VYLYPPLNAVSKSLREGTLP-NAQIEFQ-----NVQATVEQDISKLGGLSKEYAILKDII 427
           +YL PP+       ++GT   N  IE +     N+   +  D   +GGL KE  +L+  I
Sbjct: 206 IYLSPPV-----IFKKGTTKINFSIETRTSPKYNLPQPITYD--AIGGLRKEVELLQSTI 258

Query: 428 ISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 486
                + TL +  G+ P +G+LLHGPPGTGKT L +  A+ +  ++ T+NGP +VS+  G
Sbjct: 259 SLPLHQPTLFTDFGVTPPRGILLHGPPGTGKTMLLQCVANTANAHVLTINGPSIVSKYLG 318

Query: 487 ESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTD 545
           E+E AL ++F+ A +  P+++FIDE+D++AP R  D   E+  R+VATLL LM G+    
Sbjct: 319 ETEAALRDIFNEAKKYQPSIIFIDEVDSLAPNRANDDAGEVESRVVATLLTLMSGMSAAG 378

Query: 546 GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL 605
            V+VIAATNRP+S++PALRRPGR D+E+EI               +P    RL+IL    
Sbjct: 379 RVVVIAATNRPNSVDPALRRPGRFDQEVEI--------------GIPDADARLDILLKNF 424

Query: 606 SGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR----YSKIQTS 653
           S M    H+L   +++ ++  THG+VGADL+ALC E+ +  ++R    Y  I +S
Sbjct: 425 SKMSTERHTLTGEDIKTIASKTHGYVGADLSALCRESVMKTIQRGMHLYKDIDSS 479



 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 28/316 (8%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + ++ +GG R+    L   +  P      F   G  PP GIL+ GPPG  KT++ + VA+
Sbjct: 239  ITYDAIGGLRKEVELLQSTISLPLHQPTLFTDFGVTPPRGILLHGPPGTGKTMLLQCVAN 298

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
             A  + L + GP + SK++GE+E A+R +F +A+   PSIIF DE+D LA  R  +  G 
Sbjct: 299  TANAHVLTINGPSIVSKYLGETEAALRDIFNEAKKYQPSIIFIDEVDSLAPNRANDDAG- 357

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++ LL  + G+     V VIAATNRP+ +DPAL RPGRFD+ + +G P+   R 
Sbjct: 358  EVESRVVATLLTLMSGMSAAGRVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDADARL 417

Query: 952  EIFRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIE------ENLD 1001
            +I   +  K+          +I+ +A  + G  GAD+S +CRE+ +  I+      +++D
Sbjct: 418  DILLKNFSKMSTERHTLTGEDIKTIASKTHGYVGADLSALCRESVMKTIQRGMHLYKDID 477

Query: 1002 AS--RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADE 1044
            +S  ++TM  ++ A+  ++P               S+I   +EL  K + ++    EA  
Sbjct: 478  SSLLKVTMNDVENAMIEIRPSAMREIFLEMPKVFWSDIGGQEELKRKMKEMIQLPLEASA 537

Query: 1045 SGYQLRPSKSIGSNMW 1060
            +  +L  S   G  ++
Sbjct: 538  TFARLGISAPKGVLLY 553



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 137/237 (57%), Gaps = 18/237 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +     +T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 513 SDIGGQEELKRKMKEMIQLPLEASATFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 572

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS-- 527
           +N   V GPEV ++  GESE+A+ E+F  A  ++P+++F DE+DA++P R DGG   S  
Sbjct: 573 INFLAVKGPEVFNKYVGESERAIREIFRKARAASPSIIFFDEIDALSPDR-DGGSSTSAA 631

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
             ++ +LLN +DGV    GV+++AATNRPD I+PAL RPGRLDR I +            
Sbjct: 632 SHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDPALLRPGRLDRHIYV------------ 679

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             A P    RL+IL       +    + ++E L+  T G  GA++  LC EA L  +
Sbjct: 680 --APPDYDARLQILQKCTKKFQIENTNIKLEDLAERTAGCSGAEVVLLCQEAGLAAI 734


>gi|336476092|ref|YP_004615233.1| AAA ATPase [Methanosalsum zhilinae DSM 4017]
 gi|335929473|gb|AEH60014.1| AAA family ATPase, CDC48 subfamily [Methanosalsum zhilinae DSM 4017]
          Length = 760

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 130/272 (47%), Positives = 189/272 (69%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +++PSAMRE+++E P V W+D+GG   VK  L EAVEWP K+ E+FKRIG   
Sbjct: 458  DFNNALREIKPSAMREIMIETPNVSWQDIGGMENVKELLKEAVEWPLKNPESFKRIGVEA 517

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KT++A+A+A+E+  NF++ KG +L SKW GESEK +  +F++A+  A
Sbjct: 518  PKGVLLYGPPGTGKTMLAKAIANESDANFISAKGSDLLSKWYGESEKRIDEVFSRAKQVA 577

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PS+IF DE+D LA +RG  +    V++R+++QLL ELDGL +   V VI ATNRPD IDP
Sbjct: 578  PSVIFLDELDALAPVRGTAAGEPHVTERIVNQLLSELDGLEELRGVVVIGATNRPDIIDP 637

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+ V  P+   R+ IF +H +K+  + DV++ +L   ++  TGADI+ +C
Sbjct: 638  ALLRPGRFDELIVVPVPDRVSRKRIFEVHTKKMSLAEDVDLNDLVTRTDRYTGADIAAVC 697

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            ++A   A+ EN+ A ++  +H   A+   QPS
Sbjct: 698  KKAGRFALRENMQAEKVYQKHFLKAVEETQPS 729



 Score =  229 bits (584), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 118/267 (44%), Positives = 167/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG +   +++ E +E P KH E F R+G  PP G+L+ GPPG  KT++A+A
Sbjct: 205  VPTVMYEDLGGIQHAISKVREIIELPLKHPELFDRLGIEPPKGVLLHGPPGTGKTMLAKA 264

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E+   F+ V GPE+ SK+ GESE+ +R++F +A  NAPSII  DEID +A  R + +
Sbjct: 265  VANESDAYFIIVNGPEIMSKYYGESEQQIRNIFQEAEKNAPSIILIDEIDSIAPKRAEVT 324

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V  RV++QLL  +DGL +R NV VI ATNRP+ +D AL RPGRFDR + +  P+  
Sbjct: 325  G--EVERRVVAQLLSLMDGLKERENVIVIGATNRPEAVDMALRRPGRFDREIELRVPDRE 382

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI------------ 996
             R EI +IH R +P   DV+I ELA ++ G  GADI+ + REAA+ A+            
Sbjct: 383  GRMEILQIHTRGMPLYDDVDIEELAEVTYGFVGADIAALAREAAMGALRRILPEINLEDQ 442

Query: 997  ---EENLDASRITMQHLKTAIRHVQPS 1020
               +E LD   +T      A+R ++PS
Sbjct: 443  TIPKEILDKLVVTAGDFNNALREIKPS 469



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/265 (43%), Positives = 159/265 (60%), Gaps = 31/265 (11%)

Query: 394 NAQIEF----------QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLR 442
           N QIE           Q V   + +D   LGG+    + +++II +          LG+ 
Sbjct: 187 NTQIELLPEATELAPEQTVPTVMYED---LGGIQHAISKVREIIELPLKHPELFDRLGIE 243

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P KGVLLHGPPGTGKT LA+  A++S      VNGPE++S+ YGESEQ +  +F  A ++
Sbjct: 244 PPKGVLLHGPPGTGKTMLAKAVANESDAYFIIVNGPEIMSKYYGESEQQIRNIFQEAEKN 303

Query: 503 APAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPA 562
           AP+++ IDE+D+IAP R +   E+ +R+VA LL+LMDG+   + V+VI ATNRP++++ A
Sbjct: 304 APSIILIDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKERENVIVIGATNRPEAVDMA 363

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLS 621
           LRRPGR DREIE+               VP    R+EIL     GM   L D  ++E L+
Sbjct: 364 LRRPGRFDREIEL--------------RVPDREGRMEILQIHTRGM--PLYDDVDIEELA 407

Query: 622 MATHGFVGADLAALCNEAALVCLRR 646
             T+GFVGAD+AAL  EAA+  LRR
Sbjct: 408 EVTYGFVGADIAALAREAAMGALRR 432



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/270 (37%), Positives = 145/270 (53%), Gaps = 26/270 (9%)

Query: 380 LNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKS--TLS 437
            N   + ++   +    IE  NV     QDI   GG+     +LK+ +    +K+  +  
Sbjct: 459 FNNALREIKPSAMREIMIETPNVSW---QDI---GGMENVKELLKEAV-EWPLKNPESFK 511

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
            +G+   KGVLL+GPPGTGKT LA+  A++S  N  +  G +++S+ YGESE+ + EVF 
Sbjct: 512 RIGVEAPKGVLLYGPPGTGKTMLAKAIANESDANFISAKGSDLLSKWYGESEKRIDEVFS 571

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
            A Q AP+V+F+DELDA+AP R     E  +++R+V  LL+ +DG+    GV+VI ATNR
Sbjct: 572 RAKQVAPSVIFLDELDALAPVRGTAAGEPHVTERIVNQLLSELDGLEELRGVVVIGATNR 631

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD I+PAL RPGR D  I +               VP    R  I       M  +  D 
Sbjct: 632 PDIIDPALLRPGRFDELIVV--------------PVPDRVSRKRIFEVHTKKMSLA-EDV 676

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLR 645
           ++  L   T  + GAD+AA+C +A    LR
Sbjct: 677 DLNDLVTRTDRYTGADIAAVCKKAGRFALR 706


>gi|282162727|ref|YP_003355112.1| cell division control protein 48 [Methanocella paludicola SANAE]
 gi|282155041|dbj|BAI60129.1| cell division control protein 48 [Methanocella paludicola SANAE]
          Length = 760

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 134/296 (45%), Positives = 203/296 (68%), Gaps = 4/296 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DFE+A   ++PSA+RE+++EVP V WED+GG  +VK  L EAVEWP ++ ++F+
Sbjct: 453  LRVTRHDFEEALKIIQPSALREIMIEVPNVTWEDIGGLSQVKMLLREAVEWPLRYADSFR 512

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G   P G+L++GPPG  KTL+A+A+A+E+  NF+  KG +L SKW GESEK +  +F 
Sbjct: 513  RVGVEAPKGVLLYGPPGTGKTLLAKAIANESQANFITAKGSDLLSKWYGESEKHISEVFK 572

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP+I+F DE+D LA +RG  +    V++R+++QLL ELDGL +   V VI ATNR
Sbjct: 573  KARQVAPAIVFLDELDALAPVRGSAAGEPRVTERIVNQLLSELDGLEELRGVIVIGATNR 632

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFD ++ V  P+   + EIF++H++++P + DV + EL   S+  TGA
Sbjct: 633  PDIIDPALLRPGRFDEIILVPVPDRGAKREIFKVHMKRMPVAEDVILNELVDRSDNYTGA 692

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            DI+ +C++A   A+ E+L+A  +  +H   A++  +PS     I  Y+ +  + +R
Sbjct: 693  DIASVCKKAGRLALREDLNAVVVRRKHFMEALKMTEPSVTEEMIRYYQNIGGELKR 748



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 120/288 (41%), Positives = 183/288 (63%), Gaps = 17/288 (5%)

Query: 751  EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
            E   +++ P A   V  EVP+V +ED+GG R+   ++ E +E P K+ E F+R+G  PP 
Sbjct: 188  EVTEIQLLPEATEVVKDEVPEVTYEDLGGIRDAIVKIREMIELPLKYPELFQRLGIDPPR 247

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            G+L+ GPPG  KTL+A+AVA+E+   F ++ GPE+ SK+ GESE+ +R +F +A  N P+
Sbjct: 248  GVLILGPPGTGKTLLAKAVANESDAYFTSINGPEIMSKYYGESEQHLRDVFKEAENNTPA 307

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            IIF DE+D +A  R + +    V  RV++QLL  +DGL  R NV VI ATNRP+ ID AL
Sbjct: 308  IIFIDELDSIATKRAEVTG--EVERRVVAQLLSLMDGLKTRKNVIVIGATNRPEAIDNAL 365

Query: 931  LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICRE 990
             RPGRFDR + +  P++T R+EIF+IH R +P + DV++ E++  + G  GADI+ +C+E
Sbjct: 366  RRPGRFDREIELRVPDKTGRKEIFQIHTRSMPLTPDVDLDEMSDRTYGFVGADIAALCKE 425

Query: 991  AAISAIEE---NLDAS------------RITMQHLKTAIRHVQPSEIH 1023
            AA++ +     N+D +            R+T    + A++ +QPS + 
Sbjct: 426  AAMNVLRRVLPNIDMTDKALPREIFERLRVTRHDFEEALKIIQPSALR 473



 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 145/235 (61%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGG+      ++++I +          LG+ P +GVL+ GPPGTGKT LA+  A++S   
Sbjct: 214 LGGIRDAIVKIREMIELPLKYPELFQRLGIDPPRGVLILGPPGTGKTLLAKAVANESDAY 273

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             ++NGPE++S+ YGESEQ L +VF  A  + PA++FIDELD+IA  R +   E+ +R+V
Sbjct: 274 FTSINGPEIMSKYYGESEQHLRDVFKEAENNTPAIIFIDELDSIATKRAEVTGEVERRVV 333

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNRP++I+ ALRRPGR DREIE+               V
Sbjct: 334 AQLLSLMDGLKTRKNVIVIGATNRPEAIDNALRRPGRFDREIEL--------------RV 379

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EI       M  +  D +++ +S  T+GFVGAD+AALC EAA+  LRR
Sbjct: 380 PDKTGRKEIFQIHTRSMPLT-PDVDLDEMSDRTYGFVGADIAALCKEAAMNVLRR 433



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 137/239 (57%), Gaps = 24/239 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS+   +L++ +        +   +G+   KGVLL+GPPGTGKT LA+  A++S  N
Sbjct: 487 IGGLSQVKMLLREAVEWPLRYADSFRRVGVEAPKGVLLYGPPGTGKTLLAKAIANESQAN 546

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             T  G +++S+ YGESE+ + EVF  A Q APA+VF+DELDA+AP R     E  +++R
Sbjct: 547 FITAKGSDLLSKWYGESEKHISEVFKKARQVAPAIVFLDELDALAPVRGSAAGEPRVTER 606

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL+ +DG+    GV+VI ATNRPD I+PAL RPGR D  I +              
Sbjct: 607 IVNQLLSELDGLEELRGVIVIGATNRPDIIDPALLRPGRFDEIILV-------------- 652

Query: 590 AVPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            VP    + EI    +  M   E  +L+  V+     +  + GAD+A++C +A  + LR
Sbjct: 653 PVPDRGAKREIFKVHMKRMPVAEDVILNELVD----RSDNYTGADIASVCKKAGRLALR 707


>gi|307102562|gb|EFN50833.1| hypothetical protein CHLNCDRAFT_6977, partial [Chlorella variabilis]
          Length = 496

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 150/266 (56%), Positives = 197/266 (74%), Gaps = 3/266 (1%)

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
            G + ++ + DF  A  + RPSAMRE+  E+PKV W+D+GG  EVK  L EAVE P ++  
Sbjct: 231  GGSPRITIADFRTAETRTRPSAMRELAFEIPKVSWDDIGGLEEVKQHLKEAVELPFQNPA 290

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
            A +R+G  PP GIL+ GPPGCSKTL+ARAVAS+A LNF++VKGPELFSK+VGESEKA+ +
Sbjct: 291  ALERLGVIPPRGILLHGPPGCSKTLLARAVASQAKLNFISVKGPELFSKYVGESEKALAA 350

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKESD-GVSVSDRVMSQLLVELDGLH--QRVNVTV 916
            LFAKA  ++P+IIFFDEIDG+   R    D  + V +R++SQLL E+DGL    R  V V
Sbjct: 351  LFAKASTSSPAIIFFDEIDGMVTARDSSGDQSLGVGERMLSQLLQEMDGLQARSRTGVIV 410

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
            I ATNRPD +DPALLRPGRFDRL++V PP+   R  IF IH R++P + DV++  LA  +
Sbjct: 411  IGATNRPDCLDPALLRPGRFDRLVHVPPPDCAGRAAIFAIHTRRMPLAPDVDLDSLAQQA 470

Query: 977  EGCTGADISLICREAAISAIEENLDA 1002
            EG TGA I+  CREAA++A+E+++DA
Sbjct: 471  EGFTGAAIAGCCREAALAALEDDMDA 496



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/243 (46%), Positives = 145/243 (59%), Gaps = 36/243 (14%)

Query: 426 IIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNY 485
           ++I        +S  + P +GVLL+GPPGTGKT LA   A  +G     +NGPEVVS+ +
Sbjct: 9   VVIPLQAPHLFASYNIMPPRGVLLYGPPGTGKTVLACATASLAGACFLVINGPEVVSEYF 68

Query: 486 GESEQALHEVFDSASQSAPAVVFIDELDAIAPAR----------KDGGEELSQRMVATLL 535
           GESE  L  +F +A+  AP V+FIDELDA+AP+R            GG   S R+VATLL
Sbjct: 69  GESEAGLRGIFAAAAALAPTVIFIDELDALAPSRGGGPGGSRATSSGGS--SARVVATLL 126

Query: 536 NLMDGVCRTDG----VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
             MD   R  G    V+V+AATNRPDS++ ALRRPGR DRE+E+               V
Sbjct: 127 IEMD---RLGGAPAPVVVVAATNRPDSLDEALRRPGRFDREVEV--------------GV 169

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           P+P +R +IL   L GM H+L+ ++   L+ A HGFV ADLAALCNEAAL  LRR  K  
Sbjct: 170 PAPPERRDILEKQLRGMAHNLVPAQ---LADAAHGFVAADLAALCNEAALTALRRIVKAP 226

Query: 652 TSS 654
             S
Sbjct: 227 EGS 229



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/253 (40%), Positives = 143/253 (56%), Gaps = 19/253 (7%)

Query: 787  LMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELF 846
            L E V  P +    F      PP G+L++GPPG  KT++A A AS AG  FL + GPE+ 
Sbjct: 5    LKELVVIPLQAPHLFASYNIMPPRGVLLYGPPGTGKTVLACATASLAGACFLVINGPEVV 64

Query: 847  SKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE-------SDGVSVSDRVMS 899
            S++ GESE  +R +FA A A AP++IF DE+D LA  RG         S G S S RV++
Sbjct: 65   SEYFGESEAGLRGIFAAAAALAPTVIFIDELDALAPSRGGGPGGSRATSSGGS-SARVVA 123

Query: 900  QLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
             LL+E+D L      V V+AATNRPD +D AL RPGRFDR + VG P   +R +I    L
Sbjct: 124  TLLIEMDRLGGAPAPVVVVAATNRPDSLDEALRRPGRFDREVEVGVPAPPERRDILEKQL 183

Query: 959  RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDA--------SRITMQHL 1010
            R +  + ++   +LA  + G   AD++ +C EAA++A+   + A         RIT+   
Sbjct: 184  RGM--AHNLVPAQLADAAHGFVAADLAALCNEAALTALRRIVKAPEGSTGGSPRITIADF 241

Query: 1011 KTAIRHVQPSEIH 1023
            +TA    +PS + 
Sbjct: 242  RTAETRTRPSAMR 254



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/241 (39%), Positives = 134/241 (55%), Gaps = 27/241 (11%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    LK+ + +     + L  LG+ P +G+LLHGPPG  KT LAR  A  + +N
Sbjct: 268 IGGLEEVKQHLKEAVELPFQNPAALERLGVIPPRGILLHGPPGCSKTLLARAVASQAKLN 327

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE---LSQ 528
             +V GPE+ S+  GESE+AL  +F  AS S+PA++F DE+D +  AR   G++   + +
Sbjct: 328 FISVKGPELFSKYVGESEKALAALFAKASTSSPAIIFFDEIDGMVTARDSSGDQSLGVGE 387

Query: 529 RMVATLLNLMDGV---CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           RM++ LL  MDG+    RT GV+VI ATNRPD ++PAL RPGR DR +            
Sbjct: 388 RMLSQLLQEMDGLQARSRT-GVIVIGATNRPDCLDPALLRPGRFDRLVH----------- 435

Query: 586 NSPAAVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
                VP P  A R  I       M  +  D +++ L+    GF GA +A  C EAAL  
Sbjct: 436 -----VPPPDCAGRAAIFAIHTRRMPLA-PDVDLDSLAQQAEGFTGAAIAGCCREAALAA 489

Query: 644 L 644
           L
Sbjct: 490 L 490


>gi|298674999|ref|YP_003726749.1| AAA ATPase [Methanohalobium evestigatum Z-7303]
 gi|298287987|gb|ADI73953.1| AAA family ATPase, CDC48 subfamily [Methanohalobium evestigatum
            Z-7303]
          Length = 758

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 139/288 (48%), Positives = 195/288 (67%), Gaps = 3/288 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++  +DF+ A   V PSAMRE+++E+P V W+DVGG  EVK  L EAVEWP K+ EAF+
Sbjct: 452  LQVTKMDFDNALKDVSPSAMREIMIEIPNVTWDDVGGLEEVKELLSEAVEWPLKNAEAFR 511

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G   P G++++GPPG  KT++A+AVA+E+  NF+A KG +L SKW GESEK +  +F+
Sbjct: 512  RLGVEAPKGVMLYGPPGTGKTMLAKAVANESDANFIAAKGSDLLSKWYGESEKRIAEVFS 571

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP++IF DE+D +A +RG       V++RV++QLL ELDGL +   V VI ATNR
Sbjct: 572  RARQVAPTVIFLDELDAIAPVRGSTVGEPQVTERVVNQLLSELDGLEELRGVVVIGATNR 631

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +DPALLRPGRFD L+ V  P++  R +I  +H  ++  + DV+I EL   +EG TGA
Sbjct: 632  PDIVDPALLRPGRFDELIMVPVPDKEARLKILEVHTSEMELADDVSIDELVARTEGYTGA 691

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQP---SEIHSYKE 1027
            DI+ IC++A   A+ EN+ A  +   H   AI  + P   SE+  Y E
Sbjct: 692  DIAAICKKAGRFALRENIMAENVKQSHFLKAIEEIGPSVTSEVVKYYE 739



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/268 (40%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            ++P V +ED+GG +    ++ E +E P KH E F  +G   P G+L+ GPPG  KTL+AR
Sbjct: 204  DIPSVMYEDLGGIKPAIVKIREMIELPLKHPELFDSLGIEAPKGVLLQGPPGTGKTLLAR 263

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E+   F+++ GPE+ SK+ GESE+ +R +F +A  N P+IIF DE+D +A  R + 
Sbjct: 264  AVANESDAYFISINGPEIMSKFYGESEQRIREVFDEAEKNTPAIIFLDELDSIAPKRAEV 323

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            +    V  RV++QLL  +DGL +R NV +I ATNRP+ +D AL RPGRFDR + +  P+ 
Sbjct: 324  TG--EVERRVVAQLLSLMDGLKERKNVILIGATNRPEALDIALRRPGRFDREIELHVPDT 381

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------- 996
              R EI +IH R +P + DV++ +LA ++ G  GADI+ + REAA+  +           
Sbjct: 382  EGRMEILQIHTRGMPLAEDVDLNKLAEITYGFVGADIASLAREAAMGVLRRILPEIDLDE 441

Query: 997  ----EENLDASRITMQHLKTAIRHVQPS 1020
                ++ LD  ++T      A++ V PS
Sbjct: 442  PVIPKDVLDQLQVTKMDFDNALKDVSPS 469



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/253 (43%), Positives = 157/253 (62%), Gaps = 21/253 (8%)

Query: 400 QNVQATVEQDI-----SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPP 453
           ++V+   E+DI       LGG+      ++++I +         SLG+   KGVLL GPP
Sbjct: 195 ESVEVLPEKDIPSVMYEDLGGIKPAIVKIREMIELPLKHPELFDSLGIEAPKGVLLQGPP 254

Query: 454 GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
           GTGKT LAR  A++S     ++NGPE++S+ YGESEQ + EVFD A ++ PA++F+DELD
Sbjct: 255 GTGKTLLARAVANESDAYFISINGPEIMSKFYGESEQRIREVFDEAEKNTPAIIFLDELD 314

Query: 514 AIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREI 573
           +IAP R +   E+ +R+VA LL+LMDG+     V++I ATNRP++++ ALRRPGR DREI
Sbjct: 315 SIAPKRAEVTGEVERRVVAQLLSLMDGLKERKNVILIGATNRPEALDIALRRPGRFDREI 374

Query: 574 EIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 633
           E+               VP    R+EIL     GM  +  D ++  L+  T+GFVGAD+A
Sbjct: 375 ELH--------------VPDTEGRMEILQIHTRGMPLA-EDVDLNKLAEITYGFVGADIA 419

Query: 634 ALCNEAALVCLRR 646
           +L  EAA+  LRR
Sbjct: 420 SLAREAAMGVLRR 432



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 126/209 (60%), Gaps = 17/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+   KGV+L+GPPGTGKT LA+  A++S  N     G +++S+ YGESE+ + EVF  
Sbjct: 513 LGVEAPKGVMLYGPPGTGKTMLAKAVANESDANFIAAKGSDLLSKWYGESEKRIAEVFSR 572

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A Q AP V+F+DELDAIAP R    G  ++++R+V  LL+ +DG+    GV+VI ATNRP
Sbjct: 573 ARQVAPTVIFLDELDAIAPVRGSTVGEPQVTERVVNQLLSELDGLEELRGVVVIGATNRP 632

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D ++PAL RPGR D  I +               VP    RL+IL    S ME +  D  
Sbjct: 633 DIVDPALLRPGRFDELIMV--------------PVPDKEARLKILEVHTSEMELA-DDVS 677

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           ++ L   T G+ GAD+AA+C +A    LR
Sbjct: 678 IDELVARTEGYTGADIAAICKKAGRFALR 706


>gi|289580089|ref|YP_003478555.1| ATPase AAA [Natrialba magadii ATCC 43099]
 gi|448281328|ref|ZP_21472634.1| ATPase AAA [Natrialba magadii ATCC 43099]
 gi|289529642|gb|ADD03993.1| AAA family ATPase, CDC48 subfamily [Natrialba magadii ATCC 43099]
 gi|445578750|gb|ELY33150.1| ATPase AAA [Natrialba magadii ATCC 43099]
          Length = 754

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 143/302 (47%), Positives = 199/302 (65%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG  + K +L E ++WP  + E F+++  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGDTKERLRETIQWPLDYPEVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREIFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  RE IF +H R  P +  + +  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEAARERIFEVHTRDKPLADAIELEWLAEETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            I++ +   RI  +H + A+  VQPS        Y+E+  +F
Sbjct: 678  REASMAASREFINSVDPDDIDDTIGNVRIGKEHFEHALEEVQPSVTPETRERYEEIEQQF 737

Query: 1033 QR 1034
            Q+
Sbjct: 738  QQ 739



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 167/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVTYEDIGGLDNELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DE+D +AA R  E 
Sbjct: 245  VANEIDADFQTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEIGVPDKD 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------E 998
             R+EI ++H R +P   D+++   A  + G  GAD+  + RE A++A+           E
Sbjct: 363  GRKEILQVHTRGMPLVDDIDLDRYAENTHGFVGADLESLAREGAMNALRRIRPDLDLESE 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T    K A++ +QPS
Sbjct: 423  EIDAEVLETLQVTEGDFKEALKGIQPS 449



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 149/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDNELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAD 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FQTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L+D  +++  +  THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKDGRKEILQVHTRGM--PLVDDIDLDRYAENTHGFVGADLESLAREGAMNALRR 412



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 156/283 (55%), Gaps = 22/283 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            + ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLGDTKERLRETIQWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + E+F+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREIFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP  A R  I    +   +  L D+ E+E+L+  T G+VGAD+ A+C EA++   R 
Sbjct: 632 --PVPDEAARERIFE--VHTRDKPLADAIELEWLAEETEGYVGADIEAVCREASMAASRE 687

Query: 647 YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 689
           +       D+  + G +   + H +  L++   S  +T  +R+
Sbjct: 688 FINSVDPDDIDDTIGNVRIGKEHFEHALEEVQPS--VTPETRE 728


>gi|83033091|ref|XP_729326.1| ATPase [Plasmodium yoelii yoelii 17XNL]
 gi|23486760|gb|EAA20891.1| ATPase, AAA family, putative [Plasmodium yoelii yoelii]
          Length = 1034

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 159/459 (34%), Positives = 255/459 (55%), Gaps = 54/459 (11%)

Query: 501 QSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           Q   +++FIDE++ +   R++    L      TLLN MDGV +    ++I ATN  + ++
Sbjct: 428 QKKCSIIFIDEIEILCEKRENSNINL---YTTTLLNNMDGVRKNTHTILIGATNYINKLD 484

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
            ALRR GR D EIEI              ++P+   R+ IL   L  + H++ + +++ L
Sbjct: 485 LALRRSGRFDVEIEI--------------SLPNLKDRISILKKKLYNINHNINNKQIKKL 530

Query: 621 SMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCS 680
           +     F  +D+ +L N +  + LR               G L      S  +L  S   
Sbjct: 531 ADICQSFTCSDINSLINVSMYINLRE-------------NGVL------SKNILNRSIKK 571

Query: 681 RNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKG 740
           +   + +++  +  +  TS+               +  I +N  N + +S      ++  
Sbjct: 572 KLAIKKTKNISEEENQTTSN--------------KILNIDNNEINLIKNSEKKNNFNQNE 617

Query: 741 CALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEA 800
           C LK + +   K    V+PS M+E+ +++PK + +D+GG + VK  + E + +P+ +++ 
Sbjct: 618 CVLKYDHI--TKGLKYVKPSGMKELYIDIPKTRIKDIGGYKIVKQCIKECLIYPKIYKKL 675

Query: 801 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
           +++   + P GIL++GPPGCSKTL A+A+ASE  +NF++VKGPE+FSK+VGESEK +R +
Sbjct: 676 YEKYNIQTPKGILLYGPPGCSKTLFAKAIASEINMNFISVKGPEIFSKYVGESEKTIRDI 735

Query: 861 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
           F KAR N+P +IFFDEID +A+ R    +   VS+RV+ QLL E+DG+  R +V ++ AT
Sbjct: 736 FKKARENSPCVIFFDEIDSIASNRNLNQNF--VSNRVLCQLLNEIDGITIRADVIILGAT 793

Query: 921 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR 959
           NRPD IDPA LRPGRFDR++YV  PN   R  I +  L+
Sbjct: 794 NRPDLIDPAALRPGRFDRIIYVPLPNYKSRFSILKKTLK 832



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 113/214 (52%), Gaps = 15/214 (7%)

Query: 410 ISKLGGLSKEYAILKDIIISSSV-KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           I  +GG       +K+ +I   + K       ++  KG+LL+GPPG  KT  A+  A + 
Sbjct: 649 IKDIGGYKIVKQCIKECLIYPKIYKKLYEKYNIQTPKGILLYGPPGCSKTLFAKAIASEI 708

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
            +N  +V GPE+ S+  GESE+ + ++F  A +++P V+F DE+D+IA  R      +S 
Sbjct: 709 NMNFISVKGPEIFSKYVGESEKTIRDIFKKARENSPCVIFFDEIDSIASNRNLNQNFVSN 768

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R++  LLN +DG+     V+++ ATNRPD I+PA  RPGR DR I +             
Sbjct: 769 RVLCQLLNEIDGITIRADVIILGATNRPDLIDPAALRPGRFDRIIYV------------- 815

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM 622
             +P+   R  IL   L   + S +D+  E L M
Sbjct: 816 -PLPNYKSRFSILKKTLKLYKISDVDNNGESLKM 848



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 10/133 (7%)

Query: 870 SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
           SIIF DEI+ L   R  E+  +++     + LL  +DG+ +  +  +I ATN  +K+D A
Sbjct: 432 SIIFIDEIEILCEKR--ENSNINL---YTTTLLNNMDGVRKNTHTILIGATNYINKLDLA 486

Query: 930 LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN---IRELACLSEGCTGADISL 986
           L R GRFD  + +  PN  DR  I +  L  I  + ++N   I++LA + +  T +DI+ 
Sbjct: 487 LRRSGRFDVEIEISLPNLKDRISILKKKLYNI--NHNINNKQIKKLADICQSFTCSDINS 544

Query: 987 ICREAAISAIEEN 999
           +   +    + EN
Sbjct: 545 LINVSMYINLREN 557



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 770 PKVK-WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
           PK K    +GG +++K  +   +  P  ++  + +       G+L  GPPGC KT +A A
Sbjct: 271 PKKKGLNKIGGYKKIKEDIYYYILLPLLYKNIYDQFNIDVNKGVLFHGPPGCGKTFLALA 330

Query: 829 VASE 832
           +  E
Sbjct: 331 IKEE 334


>gi|330507008|ref|YP_004383436.1| AAA family ATPase [Methanosaeta concilii GP6]
 gi|328927816|gb|AEB67618.1| AAA family ATPase, CDC48 subfamily [Methanosaeta concilii GP6]
          Length = 758

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 136/272 (50%), Positives = 191/272 (70%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE A  +++PSAMRE+++EVP V WED+GG   VK  ++EAVEWP ++ E+F+R+G   
Sbjct: 456  DFEAALREIQPSAMREILVEVPNVSWEDIGGLERVKDLMVEAVEWPLRNAESFQRLGIDA 515

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPG  KT++A+AVA+E+  NF+ VKG  L SKW GESEK V  +F KAR  A
Sbjct: 516  PKGILLYGPPGTGKTMLAKAVANESEANFITVKGSALLSKWYGESEKRVEEIFRKARQVA 575

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSIIF DE+D L  +RG       V++R+++QLL E+DGL +   V VI ATNRPD IDP
Sbjct: 576  PSIIFLDELDALVPVRGGAMGEPHVTERIVNQLLSEIDGLEELHGVVVIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+ V  P+   R +IF++HL+K P + D+++ EL   ++  TGADI+ + 
Sbjct: 636  ALLRPGRFDELILVPVPDRESRRKIFQVHLKKSPLADDIDVEELLEQTDQYTGADIASLV 695

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            R+A   A+ E++ A+RI+ +H   A+  + PS
Sbjct: 696  RKAGRLALREDMAATRISQKHFLAALEEIGPS 727



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/309 (41%), Positives = 183/309 (59%), Gaps = 29/309 (9%)

Query: 727  VSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQ 786
            VS S GG+    +G  ++L             P A+      VP V +EDVGG + V T+
Sbjct: 173  VSTSPGGIVKITEGTDIEL------------LPQAVETPERSVPSVVYEDVGGLKPVITK 220

Query: 787  LMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELF 846
            + E +E P KH E F R+G  PP G+L+ GPPG  KT++A+AVA+E+   F+++ GPE+ 
Sbjct: 221  VREMIELPLKHPELFDRLGIDPPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIM 280

Query: 847  SKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELD 906
            SK+ GESEKA+R LF +A  N P+IIF DE+D +A  RG  +    V  RV++QLL  +D
Sbjct: 281  SKYYGESEKALRDLFEEAEKNTPAIIFLDELDSIAPKRGDVTG--EVERRVVAQLLSLMD 338

Query: 907  GLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD 966
            GL +R NV VI +TNRP+ +D AL RPGRFDR + +G P+   R EIF+IH R +P   D
Sbjct: 339  GLKERKNVIVIGSTNRPEALDMALRRPGRFDREIELGVPDMEGRLEIFQIHTRGMPLHED 398

Query: 967  VNIRELACLSEGCTGADISLICREAAISAI---------------EENLDASRITMQHLK 1011
            V + + A  + G  GADI+ + REAA++A+               +E LD   +     +
Sbjct: 399  VVLEDYAIETYGFVGADIAAVSREAAMNALRRILPQIDLDEPTIPKEILDRLIVQKSDFE 458

Query: 1012 TAIRHVQPS 1020
             A+R +QPS
Sbjct: 459  AALREIQPS 467



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 165/268 (61%), Gaps = 26/268 (9%)

Query: 386 SLREGT----LPNA-QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSL 439
            + EGT    LP A +   ++V + V +D+   GGL      ++++I +          L
Sbjct: 182 KITEGTDIELLPQAVETPERSVPSVVYEDV---GGLKPVITKVREMIELPLKHPELFDRL 238

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+ P KGVLLHGPPGTGKT LA+  A++S     ++NGPE++S+ YGESE+AL ++F+ A
Sbjct: 239 GIDPPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESEKALRDLFEEA 298

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
            ++ PA++F+DELD+IAP R D   E+ +R+VA LL+LMDG+     V+VI +TNRP+++
Sbjct: 299 EKNTPAIIFLDELDSIAPKRGDVTGEVERRVVAQLLSLMDGLKERKNVIVIGSTNRPEAL 358

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME-HSLLDSEVE 618
           + ALRRPGR DREIE+               VP    RLEI      GM  H   D  +E
Sbjct: 359 DMALRRPGRFDREIEL--------------GVPDMEGRLEIFQIHTRGMPLHE--DVVLE 402

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRR 646
             ++ T+GFVGAD+AA+  EAA+  LRR
Sbjct: 403 DYAIETYGFVGADIAAVSREAAMNALRR 430



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 137/242 (56%), Gaps = 30/242 (12%)

Query: 413 LGGLSKEYAILKDIIISS-----SVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           +GGL +    +KD+++ +         +   LG+   KG+LL+GPPGTGKT LA+  A++
Sbjct: 484 IGGLER----VKDLMVEAVEWPLRNAESFQRLGIDAPKGILLYGPPGTGKTMLAKAVANE 539

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD--GGEE 525
           S  N  TV G  ++S+ YGESE+ + E+F  A Q AP+++F+DELDA+ P R    G   
Sbjct: 540 SEANFITVKGSALLSKWYGESEKRVEEIFRKARQVAPSIIFLDELDALVPVRGGAMGEPH 599

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +++R+V  LL+ +DG+    GV+VI ATNRPD I+PAL RPGR D  I +          
Sbjct: 600 VTERIVNQLLSEIDGLEELHGVVVIGATNRPDIIDPALLRPGRFDELILV---------- 649

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLL--DSEVEYLSMATHGFVGADLAALCNEAALVC 643
                VP    R +I    L   + S L  D +VE L   T  + GAD+A+L  +A  + 
Sbjct: 650 ----PVPDRESRRKIFQVHL---KKSPLADDIDVEELLEQTDQYTGADIASLVRKAGRLA 702

Query: 644 LR 645
           LR
Sbjct: 703 LR 704


>gi|15897129|ref|NP_341734.1| AAA ATPase [Sulfolobus solfataricus P2]
 gi|284174370|ref|ZP_06388339.1| AAA ATPase family protein [Sulfolobus solfataricus 98/2]
 gi|384433637|ref|YP_005642995.1| AAA ATPase [Sulfolobus solfataricus 98/2]
 gi|13813310|gb|AAK40524.1| AAA family ATPase [Sulfolobus solfataricus P2]
 gi|261601791|gb|ACX91394.1| AAA family ATPase, CDC48 subfamily [Sulfolobus solfataricus 98/2]
          Length = 769

 Score =  291 bits (745), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 141/308 (45%), Positives = 210/308 (68%), Gaps = 30/308 (9%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            ++++++ DF  A  ++ PS +RE+ +EVP+VKW D+GG  E+K +L E VE+P K+ E +
Sbjct: 432  SMEVKMEDFINAFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEVVEYPLKYSELY 491

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +  G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F
Sbjct: 492  QNSGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREIF 551

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR  AP++IFFDEID +A IRG   D   V++R+++QLL E+DG+ +  NV VIAATN
Sbjct: 552  RKARMYAPAVIFFDEIDSIAPIRGISYDS-GVTERIVNQLLAEMDGIEKLENVVVIAATN 610

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD +DPALLRPGRF++L+YV PP++  R EI ++H R I    D+++ ++A  +EG TG
Sbjct: 611  RPDILDPALLRPGRFEKLIYVPPPDKRARTEILKVHTRNIALGEDISLEDVAEKTEGYTG 670

Query: 982  ADISLICREAAISAIEENL-----------------------------DASRITMQHLKT 1012
            AD++ + REA + AI E++                             +  +++++H + 
Sbjct: 671  ADLAALVREATMRAIRESMKICIDKTNENCKPTDAECRDKTMKECMKVNGVKVSLRHFEE 730

Query: 1013 AIRHVQPS 1020
            A+R V+PS
Sbjct: 731  AMRKVKPS 738



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/266 (44%), Positives = 171/266 (64%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V +ED+GG + +  ++ E VE P +H E FKR+G  PP GIL++GPPG  KTL+A+A+
Sbjct: 187  PRVTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAI 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DEID +A  R  E  
Sbjct: 247  ANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPKR-DEVI 305

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R NV VIAATNRP  +DPAL RPGRFDR + +  P++  
Sbjct: 306  G-EVERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLPDKQG 364

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R EI +IH R +P S DV++ +LA ++ G TGAD+S + REAA++++             
Sbjct: 365  RLEILQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDLNQDK 424

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L++  + M+    A + + PS
Sbjct: 425  IPPEILESMEVKMEDFINAFKEIVPS 450



 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 107/221 (48%), Positives = 143/221 (64%), Gaps = 16/221 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 218 FKRLGIEPPKGILLYGPPGVGKTLLAKAIANETDAYFTSINGPEIMSKFYGESEQRLREI 277

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++F+DE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 278 FEDAKKHAPAIIFVDEIDAIAPKRDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNR 337

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P +++PALRRPGR DREIEI +              P    RLEIL      M  S  D 
Sbjct: 338 PSAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLS-KDV 382

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY-SKIQTSSD 655
           ++E L+  THG+ GADL+AL  EAA+  LRRY  KI  + D
Sbjct: 383 DLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDLNQD 423



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/312 (37%), Positives = 166/312 (53%), Gaps = 45/312 (14%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL  ++  P++ ESM+ +   F+             NA  + +  G L    IE   V+ 
Sbjct: 419 DLNQDKIPPEILESMEVKMEDFI-------------NAFKEIVPSG-LREIYIEVPEVKW 464

Query: 405 TVEQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARL 463
           T       +GGL +    LK+++      S L  + G+ P KG+LL GPPGTGKT LA+ 
Sbjct: 465 T------DIGGLEEIKEELKEVVEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAKA 518

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---K 520
            A +SG N   V GPE++S+  GESE+A+ E+F  A   APAV+F DE+D+IAP R    
Sbjct: 519 VATESGANFIAVRGPEILSKWVGESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGISY 578

Query: 521 DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           D G  +++R+V  LL  MDG+ + + V+VIAATNRPD ++PAL RPGR ++ I       
Sbjct: 579 DSG--VTERIVNQLLAEMDGIEKLENVVVIAATNRPDILDPALLRPGRFEKLI------- 629

Query: 581 FSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                     VP P +  R EIL      +     D  +E ++  T G+ GADLAAL  E
Sbjct: 630 ---------YVPPPDKRARTEILKVHTRNIALG-EDISLEDVAEKTEGYTGADLAALVRE 679

Query: 639 AALVCLRRYSKI 650
           A +  +R   KI
Sbjct: 680 ATMRAIRESMKI 691


>gi|254579010|ref|XP_002495491.1| ZYRO0B12606p [Zygosaccharomyces rouxii]
 gi|238938381|emb|CAR26558.1| ZYRO0B12606p [Zygosaccharomyces rouxii]
          Length = 777

 Score =  291 bits (745), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 136/295 (46%), Positives = 209/295 (70%), Gaps = 6/295 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   D + A +++RPSAMRE+ LE+PKV W D+GGQ  +K ++ E ++ P +  E F 
Sbjct: 478  LKVSREDLDNAMLEIRPSAMREIFLEMPKVYWTDIGGQDVLKRKMKEMIQLPLEASETFA 537

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G   P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+FSK+VGESE+A+R +F 
Sbjct: 538  RLGVSAPKGVLLYGPPGCSKTLTAKALATESGVNFLAVKGPEIFSKYVGESERAIREIFH 597

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR+ APSIIFFDEID +++ R       + +  V++ LL E+DG+ +   V ++AATNR
Sbjct: 598  KARSAAPSIIFFDEIDAISSSRDDGGSSTTAASNVLTSLLNEIDGVEELKGVVIVAATNR 657

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS--DVNIRELACLSEGCT 980
            PD+ID ALLRPGR DR +YVGPP+ + R +I +    K    S  D N+ +LA  ++GC+
Sbjct: 658  PDEIDSALLRPGRLDRHIYVGPPDYSARLQILKKCTSKFSIDSQPDYNLEKLAEHTDGCS 717

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA+I L+C+EA ++AI E+++A+++  +H + A+    R + P  +  Y++ +++
Sbjct: 718  GAEIVLLCQEAGLAAIMEDVEANKVESRHFEKALSGISRIITPEMLAYYEDFASR 772



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/286 (40%), Positives = 170/286 (59%), Gaps = 38/286 (13%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEFQ---------NVQATVEQDISKLGGLSKEYAILKD 425
           YL PP+       R G+    ++EF          N+  ++  D   +GGL+KE  +LK+
Sbjct: 204 YLSPPV-----IFRRGS---TKVEFTKASKPSSRFNLSHSIGYD--SVGGLAKEIEVLKN 253

Query: 426 IIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQN 484
            I     K  L S  G+ P +G+LLHGPPGTGKT L R  A+ +  ++ T+NGP +VS+ 
Sbjct: 254 AIHLPLHKPKLFSEFGVAPPRGILLHGPPGTGKTMLLRCVANTTDAHILTINGPSIVSKY 313

Query: 485 YGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCR 543
            GE+E  L E+FD A    P+++FIDE+D+IAP R  D   E+  R+VATLL LMDG+  
Sbjct: 314 LGETEATLREIFDEAKLYQPSIIFIDEIDSIAPNRASDDSGEVESRVVATLLTLMDGMGA 373

Query: 544 TDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHA 603
              ++V+AATNRP++I+PALRRPGR D+E+EI              A+P   +R++IL  
Sbjct: 374 AGRLVVVAATNRPNNIDPALRRPGRFDQEVEI--------------AIPDVEERIDILMK 419

Query: 604 LLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
               M   +HSL   +++ ++  THG+VGADL ALC E+ +  ++R
Sbjct: 420 QFERMSSEKHSLSAEDIKEVAAKTHGYVGADLTALCRESVMKTIQR 465



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 147/261 (56%), Gaps = 13/261 (4%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + ++ VGG  +    L  A+  P    + F   G  PP GIL+ GPPG  KT++ R VA+
Sbjct: 236  IGYDSVGGLAKEIEVLKNAIHLPLHKPKLFSEFGVAPPRGILLHGPPGTGKTMLLRCVAN 295

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
                + L + GP + SK++GE+E  +R +F +A+   PSIIF DEID +A  R  +  G 
Sbjct: 296  TTDAHILTINGPSIVSKYLGETEATLREIFDEAKLYQPSIIFIDEIDSIAPNRASDDSG- 354

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++ LL  +DG+     + V+AATNRP+ IDPAL RPGRFD+ + +  P+  +R 
Sbjct: 355  EVESRVVATLLTLMDGMGAAGRLVVVAATNRPNNIDPALRRPGRFDQEVEIAIPDVEERI 414

Query: 952  EIFRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAISAIE------ENLD 1001
            +I      ++       S  +I+E+A  + G  GAD++ +CRE+ +  I+      + +D
Sbjct: 415  DILMKQFERMSSEKHSLSAEDIKEVAAKTHGYVGADLTALCRESVMKTIQRVLGDDDKID 474

Query: 1002 AS--RITMQHLKTAIRHVQPS 1020
             S  +++ + L  A+  ++PS
Sbjct: 475  ESLLKVSREDLDNAMLEIRPS 495



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/213 (42%), Positives = 124/213 (58%), Gaps = 17/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T + LG+   KGVLL+GPPG  KT  A+  A +SGVN   V GPE+ S+  GESE+A+ E
Sbjct: 535 TFARLGVSAPKGVLLYGPPGCSKTLTAKALATESGVNFLAVKGPEIFSKYVGESERAIRE 594

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELS--QRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A  +AP+++F DE+DAI+ +R DGG   +    ++ +LLN +DGV    GV+++AA
Sbjct: 595 IFHKARSAAPSIIFFDEIDAISSSRDDGGSSTTAASNVLTSLLNEIDGVEELKGVVIVAA 654

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME-HS 611
           TNRPD I+ AL RPGRLDR I +                P  + RL+IL    S     S
Sbjct: 655 TNRPDEIDSALLRPGRLDRHIYV--------------GPPDYSARLQILKKCTSKFSIDS 700

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             D  +E L+  T G  GA++  LC EA L  +
Sbjct: 701 QPDYNLEKLAEHTDGCSGAEIVLLCQEAGLAAI 733


>gi|432331014|ref|YP_007249157.1| AAA family ATPase, CDC48 subfamily [Methanoregula formicicum SMSP]
 gi|432137723|gb|AGB02650.1| AAA family ATPase, CDC48 subfamily [Methanoregula formicicum SMSP]
          Length = 796

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 150/286 (52%), Positives = 195/286 (68%), Gaps = 4/286 (1%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            AL++   DF +AR  V PSAMREV++EVP + W+ VGG  +VK +L EAVEWP K  + F
Sbjct: 421  ALRVTNEDFAEARKHVEPSAMREVLVEVPDITWQQVGGLEDVKQELREAVEWPLKFPDVF 480

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +R+ T+PP GILMFGPPG  KTL+A+AVA+E+  NF+AVKGPEL SKWVGESEK VR +F
Sbjct: 481  ERLQTKPPKGILMFGPPGTGKTLLAKAVANESECNFIAVKGPELLSKWVGESEKGVREIF 540

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR  +PSIIFFDEID L   RG       V++ V+SQ+L ELDG+ +  NVTV+AATN
Sbjct: 541  RKARQASPSIIFFDEIDALVPKRGSYQGSSHVTESVVSQILTELDGMEELKNVTVLAATN 600

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS---SDVNIRELACLSEG 978
            RPD +D ALLRPGR +R +YV  P+E  R++IF ++L     S    DV I EL   +EG
Sbjct: 601  RPDMLDDALLRPGRLERHIYVPAPDEESRKKIFEVYLGGETGSILAKDVAIDELVKQTEG 660

Query: 979  CTGADISLICREAAISAIEENL-DASRITMQHLKTAIRHVQPSEIH 1023
              GADI  + REA ++A+ + +      T Q  K AI++V  +  H
Sbjct: 661  YVGADIEALVREAKMAAMRDFIVQMGDRTEQERKDAIKNVMLTRAH 706



 Score =  236 bits (602), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 124/268 (46%), Positives = 172/268 (64%), Gaps = 18/268 (6%)

Query: 768  EVPKVKWEDVGG-QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 826
            EV  + +ED+GG  RE++  + E +E P +H E F+R+G +PP G+L++GPPG  KTL+A
Sbjct: 175  EVSDIHYEDIGGLGRELQL-VREMIELPLRHPEIFERLGIQPPKGVLLYGPPGTGKTLIA 233

Query: 827  RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 886
            +AVA+E   +F+ + GPE+ SK+ GESEK +R  F +A  N+P+IIF DEID +A  R  
Sbjct: 234  KAVANEVDAHFITLSGPEIMSKYYGESEKGLREKFEEAEQNSPAIIFIDEIDAIAPKRA- 292

Query: 887  ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
            E  G  V  RV++QLL  +DGL  R  V VIAATN PD IDPAL R GRFDR + +G P+
Sbjct: 293  EVQG-EVERRVVAQLLALMDGLKGRGQVIVIAATNLPDSIDPALRRGGRFDREIEIGIPD 351

Query: 947  ETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------- 997
            +  R EIF++H R +P + DV I E A  + G  GADI+L+ +EAA+ A+          
Sbjct: 352  KKGRMEIFQVHSRGVPLAEDVKIEEFANTTHGFVGADIALLVKEAAMHALRKIIPQIKID 411

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E LDA R+T +    A +HV+PS
Sbjct: 412  EDIPAEVLDALRVTNEDFAEARKHVEPS 439



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 108/246 (43%), Positives = 156/246 (63%), Gaps = 17/246 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG++P KGVLL+GPPGTGKT +A+  A++   +
Sbjct: 184 IGGLGRELQLVREMIELPLRHPEIFERLGIQPPKGVLLYGPPGTGKTLIAKAVANEVDAH 243

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E F+ A Q++PA++FIDE+DAIAP R +   E+ +R+V
Sbjct: 244 FITLSGPEIMSKYYGESEKGLREKFEEAEQNSPAIIFIDEIDAIAPKRAEVQGEVERRVV 303

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATN PDSI+PALRR GR DREIEI               +
Sbjct: 304 AQLLALMDGLKGRGQVIVIAATNLPDSIDPALRRGGRFDREIEI--------------GI 349

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKI 650
           P    R+EI      G+  +  D ++E  +  THGFVGAD+A L  EAA+  LR+   +I
Sbjct: 350 PDKKGRMEIFQVHSRGVPLA-EDVKIEEFANTTHGFVGADIALLVKEAAMHALRKIIPQI 408

Query: 651 QTSSDV 656
           +   D+
Sbjct: 409 KIDEDI 414



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 125/217 (57%), Gaps = 18/217 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               L  +P KG+L+ GPPGTGKT LA+  A++S  N   V GPE++S+  GESE+ + E
Sbjct: 479 VFERLQTKPPKGILMFGPPGTGKTLLAKAVANESECNFIAVKGPELLSKWVGESEKGVRE 538

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A Q++P+++F DE+DA+ P R    G   +++ +V+ +L  +DG+     V V+AA
Sbjct: 539 IFRKARQASPSIIFFDEIDALVPKRGSYQGSSHVTESVVSQILTELDGMEELKNVTVLAA 598

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD ++ AL RPGRL+R I +            PA  P    R +I    L G   S+
Sbjct: 599 TNRPDMLDDALLRPGRLERHIYV------------PA--PDEESRKKIFEVYLGGETGSI 644

Query: 613 L--DSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           L  D  ++ L   T G+VGAD+ AL  EA +  +R +
Sbjct: 645 LAKDVAIDELVKQTEGYVGADIEALVREAKMAAMRDF 681


>gi|340381057|ref|XP_003389038.1| PREDICTED: spermatogenesis-associated protein 5-like [Amphimedon
            queenslandica]
          Length = 735

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 131/280 (46%), Positives = 193/280 (68%), Gaps = 1/280 (0%)

Query: 756  KVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMF 815
            +++P+AM+E+++EVPKV W D+GG+  +K QL+E+ +WP KH EA +R+G R   GIL++
Sbjct: 455  QIQPTAMKEIMIEVPKVLWSDIGGEENIKKQLIESTDWPIKHPEALERLGLRAVKGILLY 514

Query: 816  GPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFD 875
            GPPGCSKT++ RA+A+E   NF+++KGPE+F+KWVG+SEKA+R +F++ARA APSI+FFD
Sbjct: 515  GPPGCSKTMIVRALATETCFNFISIKGPEIFNKWVGDSEKAIRKVFSRARAAAPSIVFFD 574

Query: 876  EIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGR 935
            EID +A  R +  DG  V DR+++QLL E+DG+     V +IAATNRPD ID ALLR GR
Sbjct: 575  EIDSIATHR-QSGDGSKVGDRILTQLLTEMDGIESLKGVLIIAATNRPDIIDKALLRSGR 633

Query: 936  FDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA 995
            FD+ +YV  P E  R EIF+I  +  P S DV+I EL   + G +GA++  +   AA  A
Sbjct: 634  FDKKIYVPLPTEGTRREIFKIRFKTTPVSEDVDITELVLKTAGYSGAEVVAVVERAAELA 693

Query: 996  IEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRL 1035
            + ++++   ++  H   +++ V P        L   FQ +
Sbjct: 694  LSDDINCCFVSRCHFDMSLKEVLPGTDAKLLSLYETFQAM 733



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 120/210 (57%), Gaps = 16/210 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           L  LGLR  KG+LL+GPPG  KT + R  A ++  N  ++ GPE+ ++  G+SE+A+ +V
Sbjct: 500 LERLGLRAVKGILLYGPPGCSKTMIVRALATETCFNFISIKGPEIFNKWVGDSEKAIRKV 559

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +AP++VF DE+D+IA  R+ G G ++  R++  LL  MDG+    GVL+IAATN
Sbjct: 560 FSRARAAAPSIVFFDEIDSIATHRQSGDGSKVGDRILTQLLTEMDGIESLKGVLIIAATN 619

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+ AL R GR D++I + +              P+   R EI          S  D
Sbjct: 620 RPDIIDKALLRSGRFDKKIYVPL--------------PTEGTRREIFKIRFKTTPVS-ED 664

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCL 644
            ++  L + T G+ GA++ A+   AA + L
Sbjct: 665 VDITELVLKTAGYSGAEVVAVVERAAELAL 694



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 128/277 (46%), Gaps = 41/277 (14%)

Query: 404 ATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLG-LRPTKGVLLHGPPGTGKTSLAR 462
           A+    +  +GG S    +LK ++    V   L S G +   +G+++HG PGTGK+ +A 
Sbjct: 211 ASASPTLDAIGGYSHIILLLKQLVQYPFVYPHLISSGQISFPRGIIIHGLPGTGKSLIAE 270

Query: 463 -LCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
            + ++   VN+  +N  +++  N   + Q +          +  ++ ++++D +      
Sbjct: 271 AISSNVPLVNIKIINSSDLLRTN---ALQLIELTLQQLESGSIGILIVNDIDKVCLN--- 324

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGV---LVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
                +Q +V+ L+   + V +   +   +V+A TN   S+   LR PGR D+EIE+   
Sbjct: 325 -----NQLIVSALIKHFETVAKLPSLRHSVVLATTNNLSSVHIELRCPGRFDKEIEMHP- 378

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                        P   +R +IL  ++  + H+L   ++  +SM THG+VG+DL  LC  
Sbjct: 379 -------------PQQLEREDILRRMMDKIPHTLSREDIRSISMLTHGYVGSDLKLLCTT 425

Query: 639 AALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQ 675
           A  + L  +   Q+           F+F  + D ML+
Sbjct: 426 AQQLLLSDFDPEQS-----------FDFHVNYDVMLR 451



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 131/277 (47%), Gaps = 23/277 (8%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGL- 835
            +GG   +   L + V++P  +           P GI++ G PG  K+L+A A++S   L 
Sbjct: 220  IGGYSHIILLLKQLVQYPFVYPHLISSGQISFPRGIIIHGLPGTGKSLIAEAISSNVPLV 279

Query: 836  NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 895
            N   +   +L       + + +     +  + +  I+  ++ID +       ++ + VS 
Sbjct: 280  NIKIINSSDLLRT---NALQLIELTLQQLESGSIGILIVNDIDKVCL-----NNQLIVSA 331

Query: 896  RVMS-QLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIF 954
             +   + + +L  L   V   V+A TN    +   L  PGRFD+ + + PP + +RE+I 
Sbjct: 332  LIKHFETVAKLPSLRHSV---VLATTNNLSSVHIELRCPGRFDKEIEMHPPQQLEREDIL 388

Query: 955  RIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDASRITMQ 1008
            R  + KIP + S  +IR ++ L+ G  G+D+ L+C  A    +     E++ D   +   
Sbjct: 389  RRMMDKIPHTLSREDIRSISMLTHGYVGSDLKLLCTTAQQLLLSDFDPEQSFDF-HVNYD 447

Query: 1009 HLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADES 1045
             +  ++R +QP+   + KE+  +  +++ S+   +E+
Sbjct: 448  VMLRSLRQIQPT---AMKEIMIEVPKVLWSDIGGEEN 481


>gi|300710838|ref|YP_003736652.1| AAA family ATPase [Halalkalicoccus jeotgali B3]
 gi|448295168|ref|ZP_21485241.1| AAA family ATPase [Halalkalicoccus jeotgali B3]
 gi|299124521|gb|ADJ14860.1| AAA family ATPase, CDC48 subfamily protein [Halalkalicoccus jeotgali
            B3]
 gi|445585138|gb|ELY39442.1| AAA family ATPase [Halalkalicoccus jeotgali B3]
          Length = 757

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 143/309 (46%), Positives = 203/309 (65%), Gaps = 16/309 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            AL++   DF+ AR  + PSA+REV +EVP   WE VGG  + K +L E ++WP ++ E F
Sbjct: 434  ALRVTEADFKSARKGIEPSALREVFVEVPDTSWEQVGGLEDTKERLRETIQWPLEYPEVF 493

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + +      G+L++GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 494  ESMDLDAAKGVLLYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 553

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            +KAR NAP++IFFDEID +A  RG+ S    V +R++SQLL ELDGL +  +V VIA TN
Sbjct: 554  SKARENAPTVIFFDEIDSVAGERGRHSGDSGVGERMVSQLLTELDGLEELEDVVVIATTN 613

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R+ IF +H R+ P + DV++ ELA  +EG  G
Sbjct: 614  RPDLIDSALLRPGRLDRHVHVPVPDEAARKAIFTVHTREKPLADDVDLDELAEETEGYVG 673

Query: 982  ADISLICREAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEI----HSY 1025
            ADI  +CREA+++A  E +++             R++ +H + A+  V PS        Y
Sbjct: 674  ADIEAVCREASMAATREFINSVGPEEAADSVGNVRVSREHFEQALEEVNPSVTPETRERY 733

Query: 1026 KELSAKFQR 1034
             E+  +F R
Sbjct: 734  AEIEERFDR 742



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 112/266 (42%), Positives = 165/266 (62%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P + +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+AV
Sbjct: 189  PNITYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAV 248

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DE+D +A  RG+ S 
Sbjct: 249  ANEIDASFHTISGPEIMSKYYGESEEQLREMFEEAEENAPAIVFIDELDSIAPKRGETSG 308

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P++  
Sbjct: 309  --DVERRVVAQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEIGVPDKEG 366

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R EI ++H R +P +  +++   A  + G  GADI+ + REAA++A+             
Sbjct: 367  RREILQVHTRGMPLAEGIDLERYAENTHGFVGADIATLAREAAMNALRRIRPELDLESEE 426

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               + LDA R+T    K+A + ++PS
Sbjct: 427  IDADVLDALRVTEADFKSARKGIEPS 452



 Score =  200 bits (508), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/236 (46%), Positives = 150/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 196 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAS 255

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A ++APA+VFIDELD+IAP R +   ++ +R+V
Sbjct: 256 FHTISGPEIMSKYYGESEEQLREMFEEAEENAPAIVFIDELDSIAPKRGETSGDVERRVV 315

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI               V
Sbjct: 316 AQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEI--------------GV 361

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L +  ++E  +  THGFVGAD+A L  EAA+  LRR
Sbjct: 362 PDKEGRREILQVHTRGM--PLAEGIDLERYAENTHGFVGADIATLAREAAMNALRR 415



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 164/310 (52%), Gaps = 26/310 (8%)

Query: 385 KSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLR 442
           KS R+G  P+A  E F  V  T      ++GGL      L++ I           S+ L 
Sbjct: 443 KSARKGIEPSALREVFVEVPDT---SWEQVGGLEDTKERLRETIQWPLEYPEVFESMDLD 499

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
             KGVLL+GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + EVF  A ++
Sbjct: 500 AAKGVLLYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVFSKAREN 559

Query: 503 APAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           AP V+F DE+D++A    R  G   + +RMV+ LL  +DG+   + V+VIA TNRPD I+
Sbjct: 560 APTVIFFDEIDSVAGERGRHSGDSGVGERMVSQLLTELDGLEELEDVVVIATTNRPDLID 619

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEY 619
            AL RPGRLDR + +               VP  A R  I    +   E  L D  +++ 
Sbjct: 620 SALLRPGRLDRHVHV--------------PVPDEAARKAIF--TVHTREKPLADDVDLDE 663

Query: 620 LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDC 679
           L+  T G+VGAD+ A+C EA++   R +       +   S G +     H +  L++ + 
Sbjct: 664 LAEETEGYVGADIEAVCREASMAATREFINSVGPEEAADSVGNVRVSREHFEQALEEVNP 723

Query: 680 SRNITESSRD 689
           S  +T  +R+
Sbjct: 724 S--VTPETRE 731


>gi|448358933|ref|ZP_21547606.1| ATPase AAA [Natrialba chahannaoensis JCM 10990]
 gi|445644311|gb|ELY97326.1| ATPase AAA [Natrialba chahannaoensis JCM 10990]
          Length = 754

 Score =  291 bits (744), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 144/302 (47%), Positives = 198/302 (65%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG  + K +L E ++WP  + E F+++  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVSWNDVGGLGDTKERLRETIQWPLDYPEVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREIFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  RE IF +H R  P +  V +  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEEARERIFEVHTRNKPLADAVELEWLAEETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            I+E +   RI   H + A+  VQPS        Y+E+  +F
Sbjct: 678  REASMAASREFINSVDADDIDETIGNVRIGKDHFEHALEEVQPSVTPETRERYEEIEQQF 737

Query: 1033 QR 1034
            ++
Sbjct: 738  RQ 739



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 167/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVTYEDIGGLDNELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   NF  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DE+D +AA R  E 
Sbjct: 245  VANEIDANFQTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEIGVPDKD 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------E 998
             R+EI ++H R +P   D+++   A  + G  GAD+  + RE A++A+           E
Sbjct: 363  GRKEILQVHTRGMPLEEDIDLDRYAENTHGFVGADLESLAREGAMNALRRIRPDLDLESE 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T    K A++ +QPS
Sbjct: 423  EIDAEVLETLQVTEGDFKEALKGIQPS 449



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/235 (46%), Positives = 147/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 193 IGGLDNELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAN 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FQTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM     D +++  +  THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKDGRKEILQVHTRGMPLE-EDIDLDRYAENTHGFVGADLESLAREGAMNALRR 412



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 155/283 (54%), Gaps = 22/283 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            + ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLGDTKERLRETIQWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + E+F+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREIFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP    R  I    +      L D+ E+E+L+  T G+VGAD+ A+C EA++   R 
Sbjct: 632 --PVPDEEARERIFE--VHTRNKPLADAVELEWLAEETEGYVGADIEAVCREASMAASRE 687

Query: 647 YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 689
           +     + D+  + G +   + H +  L++   S  +T  +R+
Sbjct: 688 FINSVDADDIDETIGNVRIGKDHFEHALEEVQPS--VTPETRE 728


>gi|147920445|ref|YP_685764.1| cell division cycle protein 48 [Methanocella arvoryzae MRE50]
 gi|110621160|emb|CAJ36438.1| cell division cycle protein 48 [Methanocella arvoryzae MRE50]
          Length = 758

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 137/309 (44%), Positives = 207/309 (66%), Gaps = 6/309 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DFE+A   V+PSA+RE+++EVP V W D+GG   VK  L EAVEWP ++ ++F+
Sbjct: 451  LRVTRQDFEEALRIVQPSALREIMIEVPNVTWGDIGGLESVKMLLREAVEWPLRYADSFR 510

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            RIG   P G+L++GPPG  KTL+A+A+A+E+  NF+  KG +L SKW GESEK +  +F 
Sbjct: 511  RIGVEAPKGVLLYGPPGTGKTLLAKAIANESQANFITAKGSDLLSKWYGESEKHISEVFK 570

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  +P+++F DE+D LA +RG  S    V++R+++QLL ELDGL +   V VI ATNR
Sbjct: 571  KARQVSPAVVFLDELDALAPVRGGASGEPRVTERIVNQLLSELDGLEELRGVVVIGATNR 630

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFD ++ V  P+   R EIF++H+R++P + DV + EL   ++  TGA
Sbjct: 631  PDIIDPALLRPGRFDEIILVPVPDRGARREIFKVHMRRMPVAPDVKLEELVDRTDMYTGA 690

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHS 1038
            DI+ +C++A   A+ E+L A+ +  +H   A++  +PS     +  Y+ +  + +R    
Sbjct: 691  DIAYLCKKAGRLALREDLKATVVRKKHFMEALKTTEPSVTDEAMRFYQNVGGELKR--KG 748

Query: 1039 NAEADESGY 1047
            + E ++S Y
Sbjct: 749  SKEIEKSMY 757



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/288 (42%), Positives = 180/288 (62%), Gaps = 17/288 (5%)

Query: 751  EKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPT 810
            E   +++ P A      EVP+V +ED+GG R+   ++ E +E P K+ E F R+G  PP 
Sbjct: 186  EVTEIQLMPEATEISRTEVPEVTYEDLGGIRDAIQKIREMIELPLKYPELFNRLGIDPPK 245

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            G+L+ GPPG  KTL+A+AVA+E+   F ++ GPE+ SK+ GESE+ +R +F +A  NAP+
Sbjct: 246  GVLILGPPGTGKTLLAKAVANESDAYFTSINGPEIMSKYYGESEQHLRDVFKEAENNAPA 305

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            IIF DE+D +A  R + +    V  RV++QLL  +DGL  R NV VI ATNRP+ ID AL
Sbjct: 306  IIFIDELDSIATKRAEVTG--EVERRVVAQLLSLMDGLKSRKNVIVIGATNRPEAIDNAL 363

Query: 931  LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICRE 990
             RPGRFDR + +  P++  R+EI +IH R +P + DV++ EL+  + G  GADI+ +C+E
Sbjct: 364  RRPGRFDREIELRVPDKAGRKEILQIHTRSMPLTPDVDLDELSDRTYGFVGADIAALCKE 423

Query: 991  AAISAIE---------------ENLDASRITMQHLKTAIRHVQPSEIH 1023
            +A++ +                + LD  R+T Q  + A+R VQPS + 
Sbjct: 424  SAMNVLRRVLPNIDMKEQSLPVQVLDKLRVTRQDFEEALRIVQPSALR 471



 Score =  196 bits (498), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 149/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGG+      ++++I +        + LG+ P KGVL+ GPPGTGKT LA+  A++S   
Sbjct: 212 LGGIRDAIQKIREMIELPLKYPELFNRLGIDPPKGVLILGPPGTGKTLLAKAVANESDAY 271

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             ++NGPE++S+ YGESEQ L +VF  A  +APA++FIDELD+IA  R +   E+ +R+V
Sbjct: 272 FTSINGPEIMSKYYGESEQHLRDVFKEAENNAPAIIFIDELDSIATKRAEVTGEVERRVV 331

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNRP++I+ ALRRPGR DREIE+               V
Sbjct: 332 AQLLSLMDGLKSRKNVIVIGATNRPEAIDNALRRPGRFDREIEL--------------RV 377

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P  A R EIL      M  +  D +++ LS  T+GFVGAD+AALC E+A+  LRR
Sbjct: 378 PDKAGRKEILQIHTRSMPLT-PDVDLDELSDRTYGFVGADIAALCKESAMNVLRR 431



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/236 (40%), Positives = 134/236 (56%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL     +L++ +        +   +G+   KGVLL+GPPGTGKT LA+  A++S  N
Sbjct: 485 IGGLESVKMLLREAVEWPLRYADSFRRIGVEAPKGVLLYGPPGTGKTLLAKAIANESQAN 544

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             T  G +++S+ YGESE+ + EVF  A Q +PAVVF+DELDA+AP R    G   +++R
Sbjct: 545 FITAKGSDLLSKWYGESEKHISEVFKKARQVSPAVVFLDELDALAPVRGGASGEPRVTER 604

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL+ +DG+    GV+VI ATNRPD I+PAL RPGR D  I +              
Sbjct: 605 IVNQLLSELDGLEELRGVVVIGATNRPDIIDPALLRPGRFDEIILV-------------- 650

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            VP    R EI    +  M  +  D ++E L   T  + GAD+A LC +A  + LR
Sbjct: 651 PVPDRGARREIFKVHMRRMPVA-PDVKLEELVDRTDMYTGADIAYLCKKAGRLALR 705


>gi|307353811|ref|YP_003894862.1| AAA family ATPase [Methanoplanus petrolearius DSM 11571]
 gi|307157044|gb|ADN36424.1| AAA family ATPase, CDC48 subfamily [Methanoplanus petrolearius DSM
           11571]
          Length = 831

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 136/258 (52%), Positives = 190/258 (73%), Gaps = 2/258 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           +K+ + DFE+A   V PSAMREV++EVP + WED+GG  +VK +LMEAVEWP K+ + F 
Sbjct: 456 IKVTIDDFEEALKHVEPSAMREVLVEVPNISWEDIGGLEDVKEELMEAVEWPLKYPDIFT 515

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           R+ T PP+GIL+FGPPG  KTL+A+AVA+++ +NF++VKGPEL SKWVGESEK +R++F 
Sbjct: 516 RLKTSPPSGILLFGPPGTGKTLLAKAVANKSEVNFISVKGPELLSKWVGESEKGIRNIFR 575

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           +AR  APSIIFFDEID L   RG       V++ V+SQ+L ELDGL +  NV V+ ATNR
Sbjct: 576 RARQAAPSIIFFDEIDALLPKRGSFEGSSHVTESVVSQILTELDGLEELKNVIVLGATNR 635

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR--KIPCSSDVNIRELACLSEGCT 980
           PD +D AL+RPGR DR +YV PP+   R++IF ++L+  +   S D+++ EL   +EG  
Sbjct: 636 PDLLDDALMRPGRLDRAIYVPPPDAEARKKIFEVYLKDSESVISKDIDLDELVKKTEGYV 695

Query: 981 GADISLICREAAISAIEE 998
           GADI ++ REA ++++ +
Sbjct: 696 GADIEMLVREAKLASMRD 713



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/314 (39%), Positives = 175/314 (55%), Gaps = 50/314 (15%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            +K  P    E   +VP V +ED+GG      Q+ E +E P +H E FK+IG +PP G+L+
Sbjct: 162  IKETPYVPEEGKKDVPDVHYEDIGGLGRELDQVREMIELPLRHPELFKKIGIQPPKGVLL 221

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+A+AVA+E   NF+ + GPE+ SK+ GESE  +R +F +A  NAP+IIF 
Sbjct: 222  YGPPGTGKTLIAKAVANEVDANFITLSGPEIMSKYYGESEGKLREVFEQAEENAPTIIFI 281

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E+ G  V  R+++QLL  +DGL  R  V VIAATN PD IDPAL R G
Sbjct: 282  DEIDSIAPKR-EETKG-EVEQRIVAQLLALMDGLKGRGEVIVIAATNLPDNIDPALRRGG 339

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSD---------------------------- 966
            RFDR + +G P+   R EIF++H R +P   D                            
Sbjct: 340  RFDREIEIGIPDRKGRLEIFQVHTRGVPLDLDEIVITTDESEELGKTFTELGEEEGKKYE 399

Query: 967  --VNIRE----LACLSEGCTGADISLICREAAISAIE--------------ENLDASRIT 1006
              +  R+     A  + G  GADISL+ +EAA+ A+               E +D  ++T
Sbjct: 400  NEIKRRKFLEPFAARTHGFVGADISLLVKEAAMHALRRELKNIKSLDDIPPEIIDKIKVT 459

Query: 1007 MQHLKTAIRHVQPS 1020
            +   + A++HV+PS
Sbjct: 460  IDDFEEALKHVEPS 473



 Score =  190 bits (482), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/265 (41%), Positives = 158/265 (59%), Gaps = 21/265 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          +G++P KGVLL+GPPGTGKT +A+  A++   N
Sbjct: 184 IGGLGRELDQVREMIELPLRHPELFKKIGIQPPKGVLLYGPPGTGKTLIAKAVANEVDAN 243

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE  L EVF+ A ++AP ++FIDE+D+IAP R++   E+ QR+V
Sbjct: 244 FITLSGPEIMSKYYGESEGKLREVFEQAEENAPTIIFIDEIDSIAPKREETKGEVEQRIV 303

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSP 588
           A LL LMDG+     V+VIAATN PD+I+PALRR GR DREIEI   D      + +   
Sbjct: 304 AQLLALMDGLKGRGEVIVIAATNLPDNIDPALRRGGRFDREIEIGIPDRKGRLEIFQVHT 363

Query: 589 AAVP----------SPAQRLEILHALLSGMEHSLLDSEV------EYLSMATHGFVGADL 632
             VP            ++ L      L   E    ++E+      E  +  THGFVGAD+
Sbjct: 364 RGVPLDLDEIVITTDESEELGKTFTELGEEEGKKYENEIKRRKFLEPFAARTHGFVGADI 423

Query: 633 AALCNEAALVCLRRYSK-IQTSSDV 656
           + L  EAA+  LRR  K I++  D+
Sbjct: 424 SLLVKEAAMHALRRELKNIKSLDDI 448



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 121/215 (56%), Gaps = 17/215 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + L   P  G+LL GPPGTGKT LA+  A+ S VN  +V GPE++S+  GESE+ +  +
Sbjct: 514 FTRLKTSPPSGILLFGPPGTGKTLLAKAVANKSEVNFISVKGPELLSKWVGESEKGIRNI 573

Query: 496 FDSASQSAPAVVFIDELDAIAPARK--DGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A Q+AP+++F DE+DA+ P R   +G   +++ +V+ +L  +DG+     V+V+ AT
Sbjct: 574 FRRARQAAPSIIFFDEIDALLPKRGSFEGSSHVTESVVSQILTELDGLEELKNVIVLGAT 633

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL- 612
           NRPD ++ AL RPGRLDR I +                P    R +I    L   E  + 
Sbjct: 634 NRPDLLDDALMRPGRLDRAIYV--------------PPPDAEARKKIFEVYLKDSESVIS 679

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            D +++ L   T G+VGAD+  L  EA L  +R +
Sbjct: 680 KDIDLDELVKKTEGYVGADIEMLVREAKLASMRDF 714


>gi|448298678|ref|ZP_21488706.1| ATPase AAA [Natronorubrum tibetense GA33]
 gi|445591348|gb|ELY45554.1| ATPase AAA [Natronorubrum tibetense GA33]
          Length = 755

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 145/309 (46%), Positives = 203/309 (65%), Gaps = 16/309 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   DF++A   ++PSAMREV +EVP V W DVGG  + K +L E ++WP  + E F
Sbjct: 432  SLQVTKGDFKEALKGIQPSAMREVFVEVPDVTWSDVGGLGDTKERLRETIQWPLDYPEVF 491

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + +      G++MFGPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 492  EAMDMEAAKGVMMFGPPGTGKTLLAKAVANEAESNFISIKGPELLNKYVGESEKGVREIF 551

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+NAP++IFFDEID +A  RGK      V +RV+SQLL ELDGL +  +V VIA TN
Sbjct: 552  EKARSNAPTVIFFDEIDSIATERGKNQSDSGVGERVVSQLLTELDGLEELEDVVVIATTN 611

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  RE+IF +H R  P +  V++  LA  +EG  G
Sbjct: 612  RPDLIDKALLRPGRLDRHVHVPVPDEEAREKIFEVHTRNKPLAEAVDLEWLASETEGYVG 671

Query: 982  ADISLICREAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEI----HSY 1025
            ADI   CREA+++A  E +++             RI+ +H + A+  V+PS        Y
Sbjct: 672  ADIEAACREASMAASREFINSVDPEDMPDSIGNVRISKEHFEHALNEVKPSVTPETREQY 731

Query: 1026 KELSAKFQR 1034
            +E+  +FQ+
Sbjct: 732  EEIEEQFQQ 740



 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 168/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 186  VPNVTYEDIGGLDSELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 245

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DE+D +AA R  E 
Sbjct: 246  VANEIDAHFETISGPEIMSKYYGESEEKLREVFEEAEENAPAIVFIDELDSIAAKR--ED 303

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 304  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEIGVPDKG 363

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EE 998
             R+EI ++H R +P    V++   A  + G  GAD+  + RE+A++A+          E+
Sbjct: 364  GRKEILQVHTRGMPLVDSVDLDHYASNTHGFVGADLESLARESAMNALRRIRPDLDLEED 423

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T    K A++ +QPS
Sbjct: 424  EIDAEVLESLQVTKGDFKEALKGIQPS 450



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 152/236 (64%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 194 IGGLDSELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 253

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDELD+IA  R+D G ++ +R+V
Sbjct: 254 FETISGPEIMSKYYGESEEKLREVFEEAEENAPAIVFIDELDSIAAKREDAGGDVERRVV 313

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 314 AQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEI--------------GV 359

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L+DS ++++ +  THGFVGADL +L  E+A+  LRR
Sbjct: 360 PDKGGRKEILQVHTRGM--PLVDSVDLDHYASNTHGFVGADLESLARESAMNALRR 413



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 142/260 (54%), Gaps = 26/260 (10%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL      L++ I           ++ +   KGV++ GPPGTGKT LA+  A+++ 
Sbjct: 465 SDVGGLGDTKERLRETIQWPLDYPEVFEAMDMEAAKGVMMFGPPGTGKTLLAKAVANEAE 524

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR----KDGGEE 525
            N  ++ GPE++++  GESE+ + E+F+ A  +AP V+F DE+D+IA  R     D G  
Sbjct: 525 SNFISIKGPELLNKYVGESEKGVREIFEKARSNAPTVIFFDEIDSIATERGKNQSDSG-- 582

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           + +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +          
Sbjct: 583 VGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDKALLRPGRLDRHVHV---------- 632

Query: 586 NSPAAVPSPAQRLEI--LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
                VP    R +I  +H     +  ++   ++E+L+  T G+VGAD+ A C EA++  
Sbjct: 633 ----PVPDEEAREKIFEVHTRNKPLAEAV---DLEWLASETEGYVGADIEAACREASMAA 685

Query: 644 LRRYSKIQTSSDVLHSTGTL 663
            R +       D+  S G +
Sbjct: 686 SREFINSVDPEDMPDSIGNV 705


>gi|20090664|ref|NP_616739.1| hypothetical protein MA1813 [Methanosarcina acetivorans C2A]
 gi|19915711|gb|AAM05219.1| hypothetical protein MA_1813 [Methanosarcina acetivorans C2A]
          Length = 764

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 138/279 (49%), Positives = 187/279 (67%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            AL++   DFE A   V+PSA+RE+++EVP V WEDVGG   VK  L E VEWP K+ E++
Sbjct: 456  ALQVTREDFENALKDVQPSAIREILIEVPNVSWEDVGGLERVKELLKEVVEWPLKNPESY 515

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + IG   P G+L++GPPG  KTL+A+A+A E+  NF+  KG +L SKW GESEK +  +F
Sbjct: 516  RDIGVEAPKGVLLYGPPGTGKTLLAKAIAHESDANFITAKGSDLLSKWYGESEKRIAEVF 575

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             +AR  APSIIF DE+D LA IRG       V+ R+++QLL E+DGL +   V VI ATN
Sbjct: 576  TRARQVAPSIIFLDELDSLAPIRGTSVGEPQVTARILNQLLSEMDGLEELRAVVVIGATN 635

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD IDPALLRPGRFD L+ V  P+E  R EIFR+H + +  + DV+I +L   ++  TG
Sbjct: 636  RPDIIDPALLRPGRFDELILVPVPDEGARREIFRVHTKNMALAEDVDIEKLVSFTDQYTG 695

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            ADI+ +C++A   A+ E+L A ++  +H   AI    PS
Sbjct: 696  ADIAAVCKKAGRHALREDLHAKKVRQKHFLQAIEETGPS 734



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/282 (44%), Positives = 182/282 (64%), Gaps = 20/282 (7%)

Query: 759  PSAMREVILE--VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            P AM E+I E  +P V +ED+GG ++  +++ E +E P KH E F R+G   P G+L+ G
Sbjct: 199  PEAM-EIISEQNIPTVMYEDLGGLKDAISKVREMIELPLKHPELFDRLGIDAPKGVLLQG 257

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KT++A+AVA+E+   F+++ GPE+ SK+ GESE+A+R +F  A  NAP+IIF DE
Sbjct: 258  PPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIFLDE 317

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R + +    V  RV++QLL  +DGL  R NV VI ATNRP+ +D AL RPGRF
Sbjct: 318  IDSIAPKRAEVTG--EVERRVVAQLLSLMDGLKARKNVIVIGATNRPEALDIALRRPGRF 375

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + +  P+   R EIF+IH R +P + +VN+ + A ++ G  GADI+ +CREAA+SA+
Sbjct: 376  DREIELRVPDTEGRLEIFQIHTRGMPLADNVNLMDFAQITYGFVGADIAALCREAAMSAL 435

Query: 997  ---------------EENLDASRITMQHLKTAIRHVQPSEIH 1023
                           +E LDA ++T +  + A++ VQPS I 
Sbjct: 436  RRILPKINLNEPEISKEILDALQVTREDFENALKDVQPSAIR 477



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/260 (43%), Positives = 159/260 (61%), Gaps = 25/260 (9%)

Query: 392 LPNAQ--IEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVL 448
           LP A   I  QN+   + +D   LGGL    + ++++I +          LG+   KGVL
Sbjct: 198 LPEAMEIISEQNIPTVMYED---LGGLKDAISKVREMIELPLKHPELFDRLGIDAPKGVL 254

Query: 449 LHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVF 508
           L GPPGTGKT LA+  A++S     ++NGPE++S+ YGESE+A+ E+F+ A ++APA++F
Sbjct: 255 LQGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIF 314

Query: 509 IDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGR 568
           +DE+D+IAP R +   E+ +R+VA LL+LMDG+     V+VI ATNRP++++ ALRRPGR
Sbjct: 315 LDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGATNRPEALDIALRRPGR 374

Query: 569 LDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THG 626
            DREIE+               VP    RLEI      GM    L   V  +  A  T+G
Sbjct: 375 FDREIEL--------------RVPDTEGRLEIFQIHTRGMP---LADNVNLMDFAQITYG 417

Query: 627 FVGADLAALCNEAALVCLRR 646
           FVGAD+AALC EAA+  LRR
Sbjct: 418 FVGADIAALCREAAMSALRR 437



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 137/237 (57%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDIIISSSVKS--TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           +GGL +   +LK+++    +K+  +   +G+   KGVLL+GPPGTGKT LA+  AH+S  
Sbjct: 491 VGGLERVKELLKEVV-EWPLKNPESYRDIGVEAPKGVLLYGPPGTGKTLLAKAIAHESDA 549

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD--GGEELSQ 528
           N  T  G +++S+ YGESE+ + EVF  A Q AP+++F+DELD++AP R    G  +++ 
Sbjct: 550 NFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPIRGTSVGEPQVTA 609

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R++  LL+ MDG+     V+VI ATNRPD I+PAL RPGR D  I +             
Sbjct: 610 RILNQLLSEMDGLEELRAVVVIGATNRPDIIDPALLRPGRFDELILV------------- 656

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             VP    R EI       M  +  D ++E L   T  + GAD+AA+C +A    LR
Sbjct: 657 -PVPDEGARREIFRVHTKNMALA-EDVDIEKLVSFTDQYTGADIAAVCKKAGRHALR 711


>gi|16120141|ref|NP_395729.1| cell division cycle protein [Halobacterium sp. NRC-1]
 gi|169237400|ref|YP_001690604.1| AAA-type ATPase (transitional ATPase homolog) [Halobacterium
            salinarum R1]
 gi|10584255|gb|AAG20864.1| cell division cycle protein [Halobacterium sp. NRC-1]
 gi|167728627|emb|CAP15469.1| AAA-type ATPase (CDC48 subfamily) [Halobacterium salinarum R1]
          Length = 737

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 135/280 (48%), Positives = 192/280 (68%), Gaps = 11/280 (3%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   + PSA+REV +EVP V W+ VGG  + K +L E V+WP +H +A++++   P
Sbjct: 440  DFKEALRGIEPSALREVFVEVPDVTWDHVGGLDDAKERLQETVQWPLEHADAYEQVALEP 499

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+L++GPPG  KTL+A+AVA+EA  NF+++KGPELF+K+VGESE+ VR +F+KAR NA
Sbjct: 500  AKGVLLYGPPGTGKTLLAKAVANEANSNFISIKGPELFNKYVGESERGVREVFSKARENA 559

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A+ RG+     +V +RV+SQLL ELDGL +  ++ VIA TNRPD ID 
Sbjct: 560  PTVVFFDEIDAIASERGQGVGDSNVGERVVSQLLTELDGLEELEDIVVIATTNRPDLIDD 619

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR + V  P+E  R EIF IH    P + DV++ EL   ++G  GADI  +C
Sbjct: 620  ALLRPGRLDRHVAVDEPDEAARREIFEIHTEDKPLAEDVDVDELVERTDGYVGADIEAVC 679

Query: 989  REAAISAIEE-----------NLDASRITMQHLKTAIRHV 1017
            REAA  A+ E           N+D   ++++H + A+  V
Sbjct: 680  REAATVAVREYVRATASAESANVDEIELSIEHFEQALEEV 719



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/320 (37%), Positives = 181/320 (56%), Gaps = 34/320 (10%)

Query: 733  GMFMSEKGCALKLELVDFEKA---------RMKVRPSAMREVILE--------VPKVKWE 775
            GMF    G  + L +VD + +          +++   + +EV +E         P + +E
Sbjct: 134  GMFSGRSGRRIPLRVVDTQPSGTVVVQNTTEIEIADQSAQEVSVESGEPENTTAPALTYE 193

Query: 776  DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGL 835
            D+GG  +   Q+ E +E P +H E F  +G  PP G+L+ GPPG  KTL+A+AVA+E   
Sbjct: 194  DIGGLDDELEQVREMIELPMRHPELFGTLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDA 253

Query: 836  NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 895
            +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DE+D +A  R  E     V  
Sbjct: 254  HFQTISGPEIMSKYYGESEEQLRDVFEEAEENAPAIVFIDELDSIAPKR--EDVSGDVER 311

Query: 896  RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFR 955
            RV++QLL  +DGL +R  +TVI  TNR D +DPAL RPGRFDR + +G P+   RE+I +
Sbjct: 312  RVVAQLLSLMDGLEERGQLTVIGTTNRVDAVDPALRRPGRFDREIEIGVPDHDGREKILQ 371

Query: 956  IHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN-----L 1000
            IH R +P    V++   A  ++G  GAD+  + +E+A+ A+          EE      L
Sbjct: 372  IHTRGMPLGDGVDLDRYAENTQGFVGADLENLVKESAMHALRRIRPDLDLDEEEIPADIL 431

Query: 1001 DASRITMQHLKTAIRHVQPS 1020
            D+  +T    K A+R ++PS
Sbjct: 432  DSIEVTENDFKEALRGIEPS 451



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/337 (36%), Positives = 187/337 (55%), Gaps = 40/337 (11%)

Query: 312 LYSRSLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVINHE 371
           L  +++  G  VA P+     +F      ++P  + +  +QP         S   V+ + 
Sbjct: 116 LVDQAVRAGQTVAFPI--GFGMFSGRSGRRIPLRVVD--TQP---------SGTVVVQNT 162

Query: 372 TKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISS 430
           T++ +        +S +E ++ + + E     A   +DI   GGL  E   ++++I +  
Sbjct: 163 TEIEI------ADQSAQEVSVESGEPENTTAPALTYEDI---GGLDDELEQVREMIELPM 213

Query: 431 SVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQ 490
                  +LG+ P KGVLLHGPPGTGKT +A+  A++   +  T++GPE++S+ YGESE+
Sbjct: 214 RHPELFGTLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAHFQTISGPEIMSKYYGESEE 273

Query: 491 ALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
            L +VF+ A ++APA+VFIDELD+IAP R+D   ++ +R+VA LL+LMDG+     + VI
Sbjct: 274 QLRDVFEEAEENAPAIVFIDELDSIAPKREDVSGDVERRVVAQLLSLMDGLEERGQLTVI 333

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
             TNR D+++PALRRPGR DREIEI               VP    R +IL     GM  
Sbjct: 334 GTTNRVDAVDPALRRPGRFDREIEI--------------GVPDHDGREKILQIHTRGM-- 377

Query: 611 SLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            L D  +++  +  T GFVGADL  L  E+A+  LRR
Sbjct: 378 PLGDGVDLDRYAENTQGFVGADLENLVKESAMHALRR 414



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/220 (41%), Positives = 131/220 (59%), Gaps = 19/220 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           + L P KGVLL+GPPGTGKT LA+  A+++  N  ++ GPE+ ++  GESE+ + EVF  
Sbjct: 495 VALEPAKGVLLYGPPGTGKTLLAKAVANEANSNFISIKGPELFNKYVGESERGVREVFSK 554

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A ++AP VVF DE+DAIA  R    G   + +R+V+ LL  +DG+   + ++VIA TNRP
Sbjct: 555 ARENAPTVVFFDEIDAIASERGQGVGDSNVGERVVSQLLTELDGLEELEDIVVIATTNRP 614

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL-DS 615
           D I+ AL RPGRLDR + +D               P  A R EI    +   +  L  D 
Sbjct: 615 DLIDDALLRPGRLDRHVAVDE--------------PDEAARREIFE--IHTEDKPLAEDV 658

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
           +V+ L   T G+VGAD+ A+C EAA V +R Y +   S++
Sbjct: 659 DVDELVERTDGYVGADIEAVCREAATVAVREYVRATASAE 698


>gi|41615258|ref|NP_963756.1| hypothetical protein NEQ475 [Nanoarchaeum equitans Kin4-M]
 gi|40068982|gb|AAR39317.1| NEQ475 [Nanoarchaeum equitans Kin4-M]
          Length = 826

 Score =  290 bits (742), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/364 (42%), Positives = 212/364 (58%), Gaps = 77/364 (21%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   V PSAMRE  +E+PKVKWED+GG  EVK +L E VEWP K++   + +G +P
Sbjct: 461  DFKEALKMVTPSAMREFYIEIPKVKWEDIGGLEEVKQELRETVEWPLKYR--IEELGIKP 518

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+A ASE+G NF+AVKGPE+ +KWVGESE+A+R +F KA+  A
Sbjct: 519  PKGVLLYGPPGTGKTLLAKAAASESGANFIAVKGPEILNKWVGESERAIREIFRKAKQAA 578

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIF DEID +A  RG  SD   V+DR+++QLL E+DG+  R +V VI ATNRPD +DP
Sbjct: 579  PAIIFIDEIDAIAPARG--SDVNRVTDRIVNQLLTEMDGITDRGDVIVIGATNRPDILDP 636

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP---------------------CSSDV 967
            ALLRPGRFDR++YV PP++  R EIF+IH RKIP                        D+
Sbjct: 637  ALLRPGRFDRVIYVPPPDKKARVEIFKIHARKIPKDPELKERFEEFKKNLEKLKEIKPDI 696

Query: 968  NIRELACLS-------------------------------EGCTGADISLICREAAISAI 996
            +I +   LS                               EG TGADI  + REA + A+
Sbjct: 697  DIEKYKNLSLEEALELYKKSKEFRDIVDTVLFYIPLAEKTEGYTGADIEAVVREAVMLAL 756

Query: 997  EENLDAS-----------------RITMQHLKTAIRHVQPS----EIHSYKELSAKFQRL 1035
             E  + +                 ++ M+H + A+  V PS     I +Y+E +  F++ 
Sbjct: 757  RELFEQAKKEKWDDKKINEMIGKLKVKMKHFEKALEKVGPSVDKETIRAYEEFAKNFRKR 816

Query: 1036 VHSN 1039
            ++  
Sbjct: 817  INKK 820



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/309 (39%), Positives = 188/309 (60%), Gaps = 44/309 (14%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            ++++P  ++E+    P+V +ED+GG ++V  ++ E VE P +H E F+R+G  PP G+L+
Sbjct: 175  IEIKPGGVQEI----PEVTYEDIGGMKDVIQKVRELVELPLRHPEIFERLGIEPPKGVLL 230

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
            +GPPG  KTL+A+AVA+E+G  F+++ GPE+ SK+VGESE  +R +F +A+ NAP+IIF 
Sbjct: 231  YGPPGTGKTLLAKAVANESGAYFISINGPEIVSKYVGESEAKLREIFEEAQKNAPAIIFI 290

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R  E+ G  V  R+++QLL  +DGL  R  V VIAATNRP+ +DPAL RPG
Sbjct: 291  DEIDAIAPKRD-EAVG-EVERRLVAQLLTLMDGLKSRGKVIVIAATNRPNALDPALRRPG 348

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN----------------------IREL 972
            RFDR + V  PNE  R EI ++H R++P    V                       +R+L
Sbjct: 349  RFDREIEVPVPNEEARYEILKVHTRRVPLGKRVVEKVDGKTVEKYVPLTKEEKEQLLRKL 408

Query: 973  ACLSEGCTGADISLICREAAISAI----------------EENLDASRITMQHLKTAIRH 1016
            A ++ G  GAD++ + +EAA++AI                +E L+   +T +  K A++ 
Sbjct: 409  AAMTHGFVGADLAALVKEAAMNAIRRVIPDILALKEEKLPKELLEKLMVTEEDFKEALKM 468

Query: 1017 VQPSEIHSY 1025
            V PS +  +
Sbjct: 469  VTPSAMREF 477



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/259 (43%), Positives = 158/259 (61%), Gaps = 8/259 (3%)

Query: 396 QIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPG 454
           +I+   VQ   E     +GG+      +++++ +          LG+ P KGVLL+GPPG
Sbjct: 176 EIKPGGVQEIPEVTYEDIGGMKDVIQKVRELVELPLRHPEIFERLGIEPPKGVLLYGPPG 235

Query: 455 TGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDA 514
           TGKT LA+  A++SG    ++NGPE+VS+  GESE  L E+F+ A ++APA++FIDE+DA
Sbjct: 236 TGKTLLAKAVANESGAYFISINGPEIVSKYVGESEAKLREIFEEAQKNAPAIIFIDEIDA 295

Query: 515 IAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIE 574
           IAP R +   E+ +R+VA LL LMDG+     V+VIAATNRP++++PALRRPGR DREIE
Sbjct: 296 IAPKRDEAVGEVERRLVAQLLTLMDGLKSRGKVIVIAATNRPNALDPALRRPGRFDREIE 355

Query: 575 IDM---SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY----LSMATHGF 627
           + +      + +LK     VP   + +E +          L   E E     L+  THGF
Sbjct: 356 VPVPNEEARYEILKVHTRRVPLGKRVVEKVDGKTVEKYVPLTKEEKEQLLRKLAAMTHGF 415

Query: 628 VGADLAALCNEAALVCLRR 646
           VGADLAAL  EAA+  +RR
Sbjct: 416 VGADLAALVKEAAMNAIRR 434



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/270 (36%), Positives = 144/270 (53%), Gaps = 38/270 (14%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
           +GGL +    L++ +    +K  +  LG++P KGVLL+GPPGTGKT LA+  A +SG N 
Sbjct: 489 IGGLEEVKQELRETV-EWPLKYRIEELGIKPPKGVLLYGPPGTGKTLLAKAAASESGANF 547

Query: 473 FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVA 532
             V GPE++++  GESE+A+ E+F  A Q+APA++FIDE+DAIAPAR      ++ R+V 
Sbjct: 548 IAVKGPEILNKWVGESERAIREIFRKAKQAAPAIIFIDEIDAIAPARGSDVNRVTDRIVN 607

Query: 533 TLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPA 589
            LL  MDG+     V+VI ATNRPD ++PAL RPGR DR I +   D      + K    
Sbjct: 608 QLLTEMDGITDRGDVIVIGATNRPDILDPALLRPGRFDRVIYVPPPDKKARVEIFKIHAR 667

Query: 590 AVPSPAQRLEILHALLSGME--------------------------------HSLLDSEV 617
            +P   +  E        +E                                  ++D+ +
Sbjct: 668 KIPKDPELKERFEEFKKNLEKLKEIKPDIDIEKYKNLSLEEALELYKKSKEFRDIVDTVL 727

Query: 618 EYLSMA--THGFVGADLAALCNEAALVCLR 645
            Y+ +A  T G+ GAD+ A+  EA ++ LR
Sbjct: 728 FYIPLAEKTEGYTGADIEAVVREAVMLALR 757


>gi|298674960|ref|YP_003726710.1| AAA ATPase [Methanohalobium evestigatum Z-7303]
 gi|298287948|gb|ADI73914.1| AAA family ATPase, CDC48 subfamily [Methanohalobium evestigatum
            Z-7303]
          Length = 733

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 140/292 (47%), Positives = 202/292 (69%), Gaps = 14/292 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+   DF +A   + PSAMREV++EV  + W+D+GG    K +L EAVEWP K+ + F
Sbjct: 417  SLKVTKNDFYEALKNIEPSAMREVVVEVAHINWDDIGGLDNAKQELSEAVEWPLKYPDLF 476

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            K + T PP G++++GPPG  KT++A+AV+ E+  NF+++KGPEL SK+VGESE+A+R  F
Sbjct: 477  KAVNTTPPRGVILYGPPGTGKTMLAKAVSGESEANFISIKGPELLSKYVGESERAIRETF 536

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KA+  AP++IF DEID +A  RGK +D  +V++RV+SQ+L E+DG+ +  +V VIAATN
Sbjct: 537  RKAKQAAPTVIFIDEIDSIAPRRGKSNDS-NVTERVVSQILTEMDGIEELKDVVVIAATN 595

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            R D +DPALLRPGRFDR++YV  P +  R+ IF IHL   P + +V+I +LA ++EG +G
Sbjct: 596  RLDIVDPALLRPGRFDRMVYVSIPEKESRKMIFNIHLEGKPLADNVDIEKLANITEGYSG 655

Query: 982  ADISLICREAAISAIEENLD-----------ASRITMQ--HLKTAIRHVQPS 1020
            ADI  ICREAA+ A+ E +            A+RI +   H + AI   +P+
Sbjct: 656  ADIEAICREAALLALREVIKPGLSKSEAKDIANRIKINWSHFEKAIARTKPT 707



 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 109/264 (41%), Positives = 167/264 (63%), Gaps = 16/264 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ +ED+GG +     + E +E P +H E F+++G  PP G++++GP G  KTL+A+AVA
Sbjct: 174  RITYEDIGGLKREIGLVREMIELPLRHPELFQKLGIEPPKGVMVYGPSGTGKTLIAKAVA 233

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
             E   NF+++ GPE+ SK+ GESE+ +R +F +A  +APSIIF DEID +A  RG+ S  
Sbjct: 234  YETDANFISLSGPEIMSKYYGESEEKLREIFEEAENDAPSIIFIDEIDSIAPKRGEVSG- 292

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R+++QLL  +DGL  R  V VIAATNRP  +D AL R GRFDR + +  P+   R
Sbjct: 293  -EVEQRIVAQLLSLMDGLKSRGEVIVIAATNRPSSVDEALRRGGRFDREIEIEIPDRDAR 351

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA---------IEEN-- 999
             EI ++H R +P  +D+ + ELA ++ G  GAD++ +C+EAA+ A         IEE   
Sbjct: 352  LEILKVHTRGMPFDNDIVLDELADITHGFVGADLASLCKEAAMRALRKIMPHIKIEEEIP 411

Query: 1000 ---LDASRITMQHLKTAIRHVQPS 1020
               LD+ ++T      A+++++PS
Sbjct: 412  PDILDSLKVTKNDFYEALKNIEPS 435



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/235 (44%), Positives = 152/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +          LG+ P KGV+++GP GTGKT +A+  A+++  N
Sbjct: 180 IGGLKREIGLVREMIELPLRHPELFQKLGIEPPKGVMVYGPSGTGKTLIAKAVAYETDAN 239

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE+ L E+F+ A   AP+++FIDE+D+IAP R +   E+ QR+V
Sbjct: 240 FISLSGPEIMSKYYGESEEKLREIFEEAENDAPSIIFIDEIDSIAPKRGEVSGEVEQRIV 299

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VIAATNRP S++ ALRR GR DREIEI+              +
Sbjct: 300 AQLLSLMDGLKSRGEVIVIAATNRPSSVDEALRRGGRFDREIEIE--------------I 345

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    RLEIL     GM     D  ++ L+  THGFVGADLA+LC EAA+  LR+
Sbjct: 346 PDRDARLEILKVHTRGMPFD-NDIVLDELADITHGFVGADLASLCKEAAMRALRK 399



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 18/209 (8%)

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P +GV+L+GPPGTGKT LA+  + +S  N  ++ GPE++S+  GESE+A+ E F  A Q+
Sbjct: 483 PPRGVILYGPPGTGKTMLAKAVSGESEANFISIKGPELLSKYVGESERAIRETFRKAKQA 542

Query: 503 APAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 561
           AP V+FIDE+D+IAP R K     +++R+V+ +L  MDG+     V+VIAATNR D ++P
Sbjct: 543 APTVIFIDEIDSIAPRRGKSNDSNVTERVVSQILTEMDGIEELKDVVVIAATNRLDIVDP 602

Query: 562 ALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYL 620
           AL RPGR DR + +              ++P    R  I +  L G    L D+ ++E L
Sbjct: 603 ALLRPGRFDRMVYV--------------SIPEKESRKMIFNIHLEG--KPLADNVDIEKL 646

Query: 621 SMATHGFVGADLAALCNEAALVCLRRYSK 649
           +  T G+ GAD+ A+C EAAL+ LR   K
Sbjct: 647 ANITEGYSGADIEAICREAALLALREVIK 675


>gi|227828221|ref|YP_002830001.1| ATPase AAA [Sulfolobus islandicus M.14.25]
 gi|227830979|ref|YP_002832759.1| AAA ATPase [Sulfolobus islandicus L.S.2.15]
 gi|229579858|ref|YP_002838257.1| AAA ATPase [Sulfolobus islandicus Y.G.57.14]
 gi|229585449|ref|YP_002843951.1| AAA ATPase [Sulfolobus islandicus M.16.27]
 gi|238620412|ref|YP_002915238.1| ATPase AAA [Sulfolobus islandicus M.16.4]
 gi|284998468|ref|YP_003420236.1| ATPase AAA [Sulfolobus islandicus L.D.8.5]
 gi|227457427|gb|ACP36114.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus L.S.2.15]
 gi|227460017|gb|ACP38703.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus M.14.25]
 gi|228010573|gb|ACP46335.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus Y.G.57.14]
 gi|228020499|gb|ACP55906.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus M.16.27]
 gi|238381482|gb|ACR42570.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus M.16.4]
 gi|284446364|gb|ADB87866.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus L.D.8.5]
          Length = 769

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 141/308 (45%), Positives = 210/308 (68%), Gaps = 30/308 (9%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            ++++++ DF  A  ++ PS +RE+ +EVP+VKW D+GG  E+K +L E VE+P K+ E +
Sbjct: 432  SMEVKMEDFINAFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEVVEYPLKYSELY 491

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +  G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F
Sbjct: 492  QNSGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREIF 551

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR  AP++IFFDEID +A IRG   D   V++R+++QLL E+DG+ +  NV VIAATN
Sbjct: 552  RKARMYAPAVIFFDEIDSIAPIRGISYDS-GVTERIVNQLLAEMDGIEKLENVVVIAATN 610

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD +DPALLRPGRF++L+YV PP++  R EI ++H R I    D+++ ++A  +EG TG
Sbjct: 611  RPDILDPALLRPGRFEKLIYVPPPDKRARIEILKVHTRNIVLGEDISLEDVAEKTEGYTG 670

Query: 982  ADISLICREAAISAIEENL-----------------------------DASRITMQHLKT 1012
            AD++ + REA + AI E++                             +  +++++H + 
Sbjct: 671  ADLAALVREATMRAIRESMKICIEKTNESCKSTDTECKDKTMKECMKVNGVKVSLRHFEE 730

Query: 1013 AIRHVQPS 1020
            A+R V+PS
Sbjct: 731  AMRKVKPS 738



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/266 (44%), Positives = 171/266 (64%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V +ED+GG + +  ++ E VE P +H E FKR+G  PP GIL++GPPG  KTL+A+A+
Sbjct: 187  PRVTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAI 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DEID +A  R  E  
Sbjct: 247  ANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPKR-DEVI 305

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R NV VIAATNRP  +DPAL RPGRFDR + +  P++  
Sbjct: 306  G-EVERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLPDKQG 364

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R EI +IH R +P S DV++ +LA ++ G TGAD+S + REAA++++             
Sbjct: 365  RLEILQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDLNQDK 424

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L++  + M+    A + + PS
Sbjct: 425  IPPEILESMEVKMEDFINAFKEIVPS 450



 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 107/221 (48%), Positives = 143/221 (64%), Gaps = 16/221 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 218 FKRLGIEPPKGILLYGPPGVGKTLLAKAIANETDAYFTSINGPEIMSKFYGESEQRLREI 277

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++F+DE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 278 FEDAKKHAPAIIFVDEIDAIAPKRDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNR 337

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P +++PALRRPGR DREIEI +              P    RLEIL      M  S  D 
Sbjct: 338 PSAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLS-KDV 382

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY-SKIQTSSD 655
           ++E L+  THG+ GADL+AL  EAA+  LRRY  KI  + D
Sbjct: 383 DLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDLNQD 423



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/316 (37%), Positives = 170/316 (53%), Gaps = 53/316 (16%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL  ++  P++ ESM+ +   F+             NA  + +  G L    IE   V+ 
Sbjct: 419 DLNQDKIPPEILESMEVKMEDFI-------------NAFKEIVPSG-LREIYIEVPEVKW 464

Query: 405 TVEQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARL 463
           T       +GGL +    LK+++      S L  + G+ P KG+LL GPPGTGKT LA+ 
Sbjct: 465 T------DIGGLEEIKEELKEVVEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAKA 518

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---K 520
            A +SG N   V GPE++S+  GESE+A+ E+F  A   APAV+F DE+D+IAP R    
Sbjct: 519 VATESGANFIAVRGPEILSKWVGESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGISY 578

Query: 521 DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           D G  +++R+V  LL  MDG+ + + V+VIAATNRPD ++PAL RPGR ++ I       
Sbjct: 579 DSG--VTERIVNQLLAEMDGIEKLENVVVIAATNRPDILDPALLRPGRFEKLI------- 629

Query: 581 FSLLKNSPAAVPSPAQ--RLEILHA----LLSGMEHSLLDSEVEYLSMATHGFVGADLAA 634
                     VP P +  R+EIL      ++ G + SL D     ++  T G+ GADLAA
Sbjct: 630 ---------YVPPPDKRARIEILKVHTRNIVLGEDISLED-----VAEKTEGYTGADLAA 675

Query: 635 LCNEAALVCLRRYSKI 650
           L  EA +  +R   KI
Sbjct: 676 LVREATMRAIRESMKI 691


>gi|229581482|ref|YP_002839881.1| AAA ATPase [Sulfolobus islandicus Y.N.15.51]
 gi|228012198|gb|ACP47959.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus Y.N.15.51]
          Length = 769

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 141/308 (45%), Positives = 210/308 (68%), Gaps = 30/308 (9%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            ++++++ DF  A  ++ PS +RE+ +EVP+VKW D+GG  E+K +L E VE+P K+ E +
Sbjct: 432  SMEVKMEDFINAFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEVVEYPLKYSELY 491

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +  G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F
Sbjct: 492  QNSGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREIF 551

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR  AP++IFFDEID +A IRG   D   V++R+++QLL E+DG+ +  NV VIAATN
Sbjct: 552  RKARMYAPAVIFFDEIDSIAPIRGISYDS-GVTERIVNQLLAEMDGIEKLENVVVIAATN 610

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD +DPALLRPGRF++L+YV PP++  R EI ++H R I    D+++ ++A  +EG TG
Sbjct: 611  RPDILDPALLRPGRFEKLIYVPPPDKRARIEILKVHTRNIVLGEDISLEDVAEKTEGYTG 670

Query: 982  ADISLICREAAISAIEENL-----------------------------DASRITMQHLKT 1012
            AD++ + REA + AI E++                             +  +++++H + 
Sbjct: 671  ADLAALVREATMRAIRESMKICIEKTNESCKSTDTECKDKTMKECMKVNGVKVSLRHFEE 730

Query: 1013 AIRHVQPS 1020
            A+R V+PS
Sbjct: 731  AMRKVKPS 738



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/266 (44%), Positives = 171/266 (64%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V +ED+GG + +  ++ E VE P +H E FKR+G  PP GIL++GPPG  KTL+A+A+
Sbjct: 187  PRVTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAI 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DEID +A  R  E  
Sbjct: 247  ANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPKR-DEVI 305

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R NV VIAATNRP  +DPAL RPGRFDR + +  P++  
Sbjct: 306  G-EVERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLPDKQG 364

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R EI +IH R +P S DV++ +LA ++ G TGAD+S + REAA++++             
Sbjct: 365  RLEILQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDLNQDK 424

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L++  + M+    A + + PS
Sbjct: 425  IPPEILESMEVKMEDFINAFKEIVPS 450



 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 107/221 (48%), Positives = 143/221 (64%), Gaps = 16/221 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 218 FKRLGIEPPKGILLYGPPGVGKTLLAKAIANETDAYFTSINGPEIMSKFYGESEQRLREI 277

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++F+DE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 278 FEDAKKHAPAIIFVDEIDAIAPKRDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNR 337

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P +++PALRRPGR DREIEI +              P    RLEIL      M  S  D 
Sbjct: 338 PSAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLS-KDV 382

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY-SKIQTSSD 655
           ++E L+  THG+ GADL+AL  EAA+  LRRY  KI  + D
Sbjct: 383 DLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDLNQD 423



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/316 (37%), Positives = 170/316 (53%), Gaps = 53/316 (16%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL  ++  P++ ESM+ +   F+             NA  + +  G L    IE   V+ 
Sbjct: 419 DLNQDKIPPEILESMEVKMEDFI-------------NAFKEIVPSG-LREIYIEVPEVKW 464

Query: 405 TVEQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARL 463
           T       +GGL +    LK+++      S L  + G+ P KG+LL GPPGTGKT LA+ 
Sbjct: 465 T------DIGGLEEIKEELKEVVEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAKA 518

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---K 520
            A +SG N   V GPE++S+  GESE+A+ E+F  A   APAV+F DE+D+IAP R    
Sbjct: 519 VATESGANFIAVRGPEILSKWVGESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGISY 578

Query: 521 DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           D G  +++R+V  LL  MDG+ + + V+VIAATNRPD ++PAL RPGR ++ I       
Sbjct: 579 DSG--VTERIVNQLLAEMDGIEKLENVVVIAATNRPDILDPALLRPGRFEKLI------- 629

Query: 581 FSLLKNSPAAVPSPAQ--RLEILHA----LLSGMEHSLLDSEVEYLSMATHGFVGADLAA 634
                     VP P +  R+EIL      ++ G + SL D     ++  T G+ GADLAA
Sbjct: 630 ---------YVPPPDKRARIEILKVHTRNIVLGEDISLED-----VAEKTEGYTGADLAA 675

Query: 635 LCNEAALVCLRRYSKI 650
           L  EA +  +R   KI
Sbjct: 676 LVREATMRAIRESMKI 691


>gi|255727749|ref|XP_002548800.1| protein AFG2 [Candida tropicalis MYA-3404]
 gi|240133116|gb|EER32672.1| protein AFG2 [Candida tropicalis MYA-3404]
          Length = 770

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 136/295 (46%), Positives = 205/295 (69%), Gaps = 6/295 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            ++K+  +D   A  ++RPSAMRE+ LE+PKV W D+GGQ E+K +L+E V+ P +  ++F
Sbjct: 472  SIKVTEIDVNHALPEIRPSAMREIFLEMPKVHWSDIGGQDELKRKLIEVVQLPLEASQSF 531

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
              +G   P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+F+K+VGESE+ +R +F
Sbjct: 532  ANLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERTIREIF 591

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KARA +PSIIFFDEID +A  R  +S   + S+ V++ LL E+DG+ +   V ++ ATN
Sbjct: 592  RKARAASPSIIFFDEIDAIAGDRDGDSSTTAASN-VLTSLLNEIDGVEELKGVVIVGATN 650

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD-VNIRELACLSEGCT 980
            +P +IDPALLRPGR DR +YV PP+   R +I +   R      D V + +LA L+EGC+
Sbjct: 651  KPTEIDPALLRPGRLDRHIYVAPPDYEARLQILQKCTRNFNLDKDEVALTKLADLTEGCS 710

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            GA+++L+C+EA ++AI E+ DA+ +  +H   A+    + + P  +  Y+  S +
Sbjct: 711  GAEVTLLCQEAGLAAIMEDKDATVVCKRHFDHALQGISKGITPEMLEYYENFSNR 765



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/278 (37%), Positives = 161/278 (57%), Gaps = 23/278 (8%)

Query: 375 YLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVK 433
           YL  P  +++ +      P ++ ++ N+   +  D  ++GGLSKE  +LK  I +  +  
Sbjct: 202 YLITPKTSINVTTDANATP-SRSKYPNLPQLITYD--QVGGLSKEIELLKSTIELPLNNP 258

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD-SGVNLFTVNGPEVVSQNYGESEQAL 492
              S  G+ P +G+LLHGPPGTGKT L R  A+   G ++ T+NGP +VS+  GE+E A+
Sbjct: 259 MLFSEFGITPPRGILLHGPPGTGKTMLLRCVANSIVGAHILTINGPSIVSKYLGETENAI 318

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            ++F+ A +  P++VF+DE+D++AP+R  D   E   R+VA LL +MDG+     ++V+ 
Sbjct: 319 RDIFNEAKKFQPSIVFMDEIDSLAPSRNSDDSGETESRVVAQLLTMMDGMGDNGRIVVVG 378

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRP++I+ ALRRPGR D+E+EI               +P    R EIL    S M   
Sbjct: 379 ATNRPNAIDSALRRPGRFDQEVEI--------------GIPDVEAREEILSKQFSKMNSD 424

Query: 612 ---LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              L   ++  ++  THG+VGADL ALC E+ +  + R
Sbjct: 425 KCELTKEDITRIASKTHGYVGADLTALCRESVMKAINR 462



 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 159/315 (50%), Gaps = 27/315 (8%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA- 830
            + ++ VGG  +    L   +E P  +   F   G  PP GIL+ GPPG  KT++ R VA 
Sbjct: 232  ITYDQVGGLSKEIELLKSTIELPLNNPMLFSEFGITPPRGILLHGPPGTGKTMLLRCVAN 291

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            S  G + L + GP + SK++GE+E A+R +F +A+   PSI+F DEID LA  R  +  G
Sbjct: 292  SIVGAHILTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIVFMDEIDSLAPSRNSDDSG 351

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
             + S RV++QLL  +DG+     + V+ ATNRP+ ID AL RPGRFD+ + +G P+   R
Sbjct: 352  ETES-RVVAQLLTMMDGMGDNGRIVVVGATNRPNAIDSALRRPGRFDQEVEIGIPDVEAR 410

Query: 951  EEIFRIHLRKI---PCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL------ 1000
            EEI      K+    C  +  +I  +A  + G  GAD++ +CRE+ + AI   L      
Sbjct: 411  EEILSKQFSKMNSDKCELTKEDITRIASKTHGYVGADLTALCRESVMKAINRGLTEGISQ 470

Query: 1001 ---DASRITMQHLKTAIR------------HVQPSEIHSYKELSAKFQRLVHSNAEADES 1045
                 + I + H    IR             V  S+I    EL  K   +V    EA +S
Sbjct: 471  SSIKVTEIDVNHALPEIRPSAMREIFLEMPKVHWSDIGGQDELKRKLIEVVQLPLEASQS 530

Query: 1046 GYQLRPSKSIGSNMW 1060
               L  S   G  ++
Sbjct: 531  FANLGVSSPKGVLLY 545



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 117/211 (55%), Gaps = 15/211 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           + ++LG+   KGVLL+GPPG  KT  A+  A +SG+N   V GPE+ ++  GESE+ + E
Sbjct: 530 SFANLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERTIRE 589

Query: 495 VFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           +F  A  ++P+++F DE+DAIA  R  D     +  ++ +LLN +DGV    GV+++ AT
Sbjct: 590 IFRKARAASPSIIFFDEIDAIAGDRDGDSSTTAASNVLTSLLNEIDGVEELKGVVIVGAT 649

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           N+P  I+PAL RPGRLDR I +              A P    RL+IL            
Sbjct: 650 NKPTEIDPALLRPGRLDRHIYV--------------APPDYEARLQILQKCTRNFNLDKD 695

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           +  +  L+  T G  GA++  LC EA L  +
Sbjct: 696 EVALTKLADLTEGCSGAEVTLLCQEAGLAAI 726


>gi|16081896|ref|NP_394300.1| ATPase [Thermoplasma acidophilum DSM 1728]
 gi|11387127|sp|O05209.1|VAT_THEAC RecName: Full=VCP-like ATPase
 gi|1916752|gb|AAC45089.1| VCP-like ATPase [Thermoplasma acidophilum]
 gi|10640117|emb|CAC11969.1| VAT ATPase (VCP-like ATPase) [Thermoplasma acidophilum]
          Length = 745

 Score =  290 bits (741), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 135/292 (46%), Positives = 201/292 (68%), Gaps = 5/292 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A   + PS++REV++EVP V W+D+GG  +VK ++ E VE P    + FKR+G RP
Sbjct: 441  DFKNALKSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRP 500

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G L++GPPG  KTL+A+AVA+E+  NF+++KGPE+ SKWVGESEKA+R +F KA+  A
Sbjct: 501  SKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVA 560

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+F DEID +A  RG  SD   V++R+++QLL  LDG+     V VI ATNRPD +DP
Sbjct: 561  PAIVFLDEIDSIAPRRGTTSDS-GVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDP 619

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFD+L+Y+ PP++  R  I ++H + +P + DV++ ++A  +EG  GAD+  +C
Sbjct: 620  ALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLC 679

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLV 1036
            REA ++A  EN DA+ ++ ++   A++ ++PS     I  Y+ LS    + V
Sbjct: 680  REAGMNAYRENPDATSVSQKNFLDALKTIRPSVDEEVIKFYRTLSETMSKSV 731



 Score =  236 bits (601), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 125/316 (39%), Positives = 193/316 (61%), Gaps = 21/316 (6%)

Query: 727  VSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQ 786
            ++  +G +F   K    K+ +   E+ ++++R     EV+ EV ++ +ED+GG  E   +
Sbjct: 142  LAGQTGLLFKVVKTLPSKVPVEIGEETKIEIREEPASEVLEEVSRISYEDIGGLSEQLGK 201

Query: 787  LMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELF 846
            + E +E P KH E F+R+G  PP G++++GPPG  KTL+ARAVA+E+G NFL++ GPE+ 
Sbjct: 202  IREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIM 261

Query: 847  SKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELD 906
            SK+ G+SE+ +R +F+KA   APSIIF DEID +A  R +E  G  V  RV++QLL  +D
Sbjct: 262  SKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKR-EEVQG-EVERRVVAQLLTLMD 319

Query: 907  GLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC--- 963
            G+ +R +V VI ATNR D IDPAL RPGRFDR + +G P+   R+EI  IH R +P    
Sbjct: 320  GMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMS 379

Query: 964  --SSDVNIRELACLSEGCTGADISLICREAAISAIE--------------ENLDASRITM 1007
                +  + E+A  + G  GAD++ + RE+A++A+               E L+   +T 
Sbjct: 380  EEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVTE 439

Query: 1008 QHLKTAIRHVQPSEIH 1023
               K A++ ++PS + 
Sbjct: 440  DDFKNALKSIEPSSLR 455



 Score =  211 bits (537), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/240 (45%), Positives = 155/240 (64%), Gaps = 19/240 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS++   ++++I +          LG+ P KGV+L+GPPGTGKT +AR  A++SG N
Sbjct: 192 IGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGAN 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             ++NGPE++S+ YG+SEQ L E+F  A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 252 FLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNR D+I+PALRRPGR DREIEI               V
Sbjct: 312 AQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSE----VEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL      M   + + E    +E ++  T+GFVGADLAAL  E+A+  LRRY
Sbjct: 358 PDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRY 417



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/265 (38%), Positives = 145/265 (54%), Gaps = 27/265 (10%)

Query: 385 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRP 443
           KS+   +L    +E  NV          +GGL      +K+ +    +K      LG+RP
Sbjct: 447 KSIEPSSLREVMVEVPNVHW------DDIGGLEDVKREIKETVELPLLKPDVFKRLGIRP 500

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
           +KG LL+GPPG GKT LA+  A +S  N  ++ GPEV+S+  GESE+A+ E+F  A Q A
Sbjct: 501 SKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVA 560

Query: 504 PAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           PA+VF+DE+D+IAP R    D G  +++R+V  LL  +DG+   +GV+VI ATNRPD ++
Sbjct: 561 PAIVFLDEIDSIAPRRGTTSDSG--VTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMD 618

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
           PAL R GR D+ I I                P    RL IL      M  +  D ++  +
Sbjct: 619 PALLRAGRFDKLIYI--------------PPPDKEARLSILKVHTKNMPLA-PDVDLNDI 663

Query: 621 SMATHGFVGADLAALCNEAALVCLR 645
           +  T G+VGADL  LC EA +   R
Sbjct: 664 AQRTEGYVGADLENLCREAGMNAYR 688


>gi|385773898|ref|YP_005646465.1| AAA ATPase [Sulfolobus islandicus HVE10/4]
 gi|385776540|ref|YP_005649108.1| AAA ATPase [Sulfolobus islandicus REY15A]
 gi|323475288|gb|ADX85894.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus REY15A]
 gi|323478013|gb|ADX83251.1| AAA family ATPase, CDC48 subfamily [Sulfolobus islandicus HVE10/4]
          Length = 769

 Score =  289 bits (740), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 141/308 (45%), Positives = 209/308 (67%), Gaps = 30/308 (9%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            ++++++ DF  A  ++ PS +RE+ +EVP+VKW D+GG  E+K +L E VE+P K+ E +
Sbjct: 432  SMEVKMEDFINAFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEVVEYPLKYSELY 491

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +  G  PP GIL+FGPPG  KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKAVR +F
Sbjct: 492  QNSGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAVREIF 551

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR  AP++IFFDEID +A IRG   D   V++R+++QLL E+DG+ +  NV VIAATN
Sbjct: 552  RKARMYAPAVIFFDEIDSIAPIRGISYDS-GVTERIVNQLLAEMDGIEKLENVVVIAATN 610

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD +DPALLRPGRF++L+YV PP+   R EI ++H R I    D+++ ++A  +EG TG
Sbjct: 611  RPDILDPALLRPGRFEKLIYVPPPDRRARIEILKVHTRNIVLGEDISLEDVAEKTEGYTG 670

Query: 982  ADISLICREAAISAIEENL-----------------------------DASRITMQHLKT 1012
            AD++ + REA + AI E++                             +  +++++H + 
Sbjct: 671  ADLAALVREATMRAIRESMKICIEKTNESCKSTDTECKDKTMKECMKVNGVKVSLRHFEE 730

Query: 1013 AIRHVQPS 1020
            A+R V+PS
Sbjct: 731  AMRKVKPS 738



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/266 (44%), Positives = 171/266 (64%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P+V +ED+GG + +  ++ E VE P +H E FKR+G  PP GIL++GPPG  KTL+A+A+
Sbjct: 187  PRVTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAI 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F ++ GPE+ SK+ GESE+ +R +F  A+ +AP+IIF DEID +A  R  E  
Sbjct: 247  ANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPKR-DEVI 305

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R NV VIAATNRP  +DPAL RPGRFDR + +  P++  
Sbjct: 306  G-EVERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLPDKQG 364

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R EI +IH R +P S DV++ +LA ++ G TGAD+S + REAA++++             
Sbjct: 365  RLEILQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDLNQDK 424

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L++  + M+    A + + PS
Sbjct: 425  IPPEILESMEVKMEDFINAFKEIVPS 450



 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 107/221 (48%), Positives = 143/221 (64%), Gaps = 16/221 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL+GPPG GKT LA+  A+++     ++NGPE++S+ YGESEQ L E+
Sbjct: 218 FKRLGIEPPKGILLYGPPGVGKTLLAKAIANETDAYFTSINGPEIMSKFYGESEQRLREI 277

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A + APA++F+DE+DAIAP R +   E+ +R+VA LL LMDG+     V+VIAATNR
Sbjct: 278 FEDAKKHAPAIIFVDEIDAIAPKRDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNR 337

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P +++PALRRPGR DREIEI +              P    RLEIL      M  S  D 
Sbjct: 338 PSAVDPALRRPGRFDREIEIPL--------------PDKQGRLEILQIHTRNMPLS-KDV 382

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRY-SKIQTSSD 655
           ++E L+  THG+ GADL+AL  EAA+  LRRY  KI  + D
Sbjct: 383 DLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDLNQD 423



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/316 (37%), Positives = 170/316 (53%), Gaps = 53/316 (16%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL  ++  P++ ESM+ +   F+             NA  + +  G L    IE   V+ 
Sbjct: 419 DLNQDKIPPEILESMEVKMEDFI-------------NAFKEIVPSG-LREIYIEVPEVKW 464

Query: 405 TVEQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARL 463
           T       +GGL +    LK+++      S L  + G+ P KG+LL GPPGTGKT LA+ 
Sbjct: 465 T------DIGGLEEIKEELKEVVEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAKA 518

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---K 520
            A +SG N   V GPE++S+  GESE+A+ E+F  A   APAV+F DE+D+IAP R    
Sbjct: 519 VATESGANFIAVRGPEILSKWVGESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGISY 578

Query: 521 DGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFL 580
           D G  +++R+V  LL  MDG+ + + V+VIAATNRPD ++PAL RPGR ++ I       
Sbjct: 579 DSG--VTERIVNQLLAEMDGIEKLENVVVIAATNRPDILDPALLRPGRFEKLI------- 629

Query: 581 FSLLKNSPAAVPSPAQ--RLEILHA----LLSGMEHSLLDSEVEYLSMATHGFVGADLAA 634
                     VP P +  R+EIL      ++ G + SL D     ++  T G+ GADLAA
Sbjct: 630 ---------YVPPPDRRARIEILKVHTRNIVLGEDISLED-----VAEKTEGYTGADLAA 675

Query: 635 LCNEAALVCLRRYSKI 650
           L  EA +  +R   KI
Sbjct: 676 LVREATMRAIRESMKI 691


>gi|410722083|ref|ZP_11361398.1| AAA family ATPase, CDC48 subfamily [Methanobacterium sp. Maddingley
            MBC34]
 gi|410597889|gb|EKQ52496.1| AAA family ATPase, CDC48 subfamily [Methanobacterium sp. Maddingley
            MBC34]
          Length = 761

 Score =  289 bits (740), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 138/305 (45%), Positives = 197/305 (64%), Gaps = 9/305 (2%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  +   + PSA+REV +EVP V W D+GG  E+K  L E VEWP  +  +F+RIG +P
Sbjct: 456  DFIDSMKSISPSALREVFIEVPNVHWGDIGGLEELKESLKEVVEWPLSNISSFQRIGIQP 515

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              GIL+FGPPG  KTL+ +AVA+E+  NF++VKG E+ SKW GESE+ +  +F KA+  +
Sbjct: 516  SKGILLFGPPGTGKTLLTKAVATESKANFISVKGSEILSKWFGESERKIAEIFKKAKQAS 575

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P IIFFDEID +A IRG  +    V++R+++ +L E+DGL +   V VI ATNRPD +DP
Sbjct: 576  PCIIFFDEIDAIAPIRGSAAGEPRVTERMVNTILSEMDGLEELRGVVVIGATNRPDLMDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD ++ V PP+E  R EI R+H+  +    DV ++ELA  +EG TGADI ++C
Sbjct: 636  ALLRPGRFDEVVLVPPPDENARREILRVHVGHMALDDDVKLKELAKKTEGYTGADIEVLC 695

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQ 1048
            R+A + A+ E+++  +++ +H K A+  + PS     +E   +  R         E G  
Sbjct: 696  RKAGMIALHEDMNIQKVSYRHFKAALNKINPSTTPKTREYYEQIAR---------ELGRG 746

Query: 1049 LRPSK 1053
            L P K
Sbjct: 747  LEPKK 751



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 119/246 (48%), Positives = 168/246 (68%), Gaps = 2/246 (0%)

Query: 755  MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 814
            ++VRP A+  +  +VP V ++DVGG +   +++ E +E P +H E F R+G  PP G+L+
Sbjct: 189  VEVRPEAVEVMEKKVPDVTYDDVGGLKREISKVREMIELPLRHPEIFDRLGIDPPKGVLL 248

Query: 815  FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 874
             G PG  KTL+A+AVASE+G NF+A+ GPE+ SK+VGE+EK +R +F +A  NAP++IF 
Sbjct: 249  HGAPGTGKTLLAKAVASESGSNFVAINGPEVMSKFVGEAEKKIREIFEEAAENAPTVIFI 308

Query: 875  DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 934
            DEID +A  R +E  G  V  RV++Q+L  +DGL +R  V VI ATNRPD +D AL RPG
Sbjct: 309  DEIDAIAPKR-EEVTG-EVERRVVAQILALMDGLKERGKVIVIGATNRPDALDQALRRPG 366

Query: 935  RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
            RFDR + +  P+   R EI  IH R +P S DV+I ELA  + G  GAD++ +CREAA++
Sbjct: 367  RFDREIELRVPDREGRMEILEIHTRAMPLSDDVDIGELAETTHGFVGADLAALCREAAMN 426

Query: 995  AIEENL 1000
            A+   L
Sbjct: 427  ALRRVL 432



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/235 (47%), Positives = 152/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E + ++++I +          LG+ P KGVLLHG PGTGKT LA+  A +SG N
Sbjct: 211 VGGLKREISKVREMIELPLRHPEIFDRLGIDPPKGVLLHGAPGTGKTLLAKAVASESGSN 270

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              +NGPEV+S+  GE+E+ + E+F+ A+++AP V+FIDE+DAIAP R++   E+ +R+V
Sbjct: 271 FVAINGPEVMSKFVGEAEKKIREIFEEAAENAPTVIFIDEIDAIAPKREEVTGEVERRVV 330

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A +L LMDG+     V+VI ATNRPD+++ ALRRPGR DREIE+               V
Sbjct: 331 AQILALMDGLKERGKVIVIGATNRPDALDQALRRPGRFDREIEL--------------RV 376

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R+EIL      M  S  D ++  L+  THGFVGADLAALC EAA+  LRR
Sbjct: 377 PDREGRMEILEIHTRAMPLS-DDVDIGELAETTHGFVGADLAALCREAAMNALRR 430



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/317 (35%), Positives = 166/317 (52%), Gaps = 46/317 (14%)

Query: 345 DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA 404
           DL  +R  P++ E +   SN F+ +               KS+    L    IE  NV  
Sbjct: 436 DLQEQRIAPEILEKLFVTSNDFIDSM--------------KSISPSALREVFIEVPNVHW 481

Query: 405 TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARL 463
                   +GGL +    LK+++    S  S+   +G++P+KG+LL GPPGTGKT L + 
Sbjct: 482 ------GDIGGLEELKESLKEVVEWPLSNISSFQRIGIQPSKGILLFGPPGTGKTLLTKA 535

Query: 464 CAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGG 523
            A +S  N  +V G E++S+ +GESE+ + E+F  A Q++P ++F DE+DAIAP R    
Sbjct: 536 VATESKANFISVKGSEILSKWFGESERKIAEIFKKAKQASPCIIFFDEIDAIAPIRGSAA 595

Query: 524 EE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
            E  +++RMV T+L+ MDG+    GV+VI ATNRPD ++PAL RPGR D  +        
Sbjct: 596 GEPRVTERMVNTILSEMDGLEELRGVVVIGATNRPDLMDPALLRPGRFDEVV-------- 647

Query: 582 SLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCN 637
                    VP P +  R EIL   +    H  LD +V+   +A  T G+ GAD+  LC 
Sbjct: 648 --------LVPPPDENARREILRVHVG---HMALDDDVKLKELAKKTEGYTGADIEVLCR 696

Query: 638 EAALVCLRRYSKIQTSS 654
           +A ++ L     IQ  S
Sbjct: 697 KAGMIALHEDMNIQKVS 713


>gi|296419362|ref|XP_002839281.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635401|emb|CAZ83472.1| unnamed protein product [Tuber melanosporum]
          Length = 651

 Score =  289 bits (740), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 143/277 (51%), Positives = 190/277 (68%), Gaps = 2/277 (0%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L   D + A   VRP+AMRE+ LE PKV+W D+GGQ EVK +L EAVEWP  H E F R+
Sbjct: 354  LREADLDSALKDVRPTAMREIFLEPPKVRWSDIGGQEEVKQRLREAVEWPLAHPETFSRL 413

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G  P  G+L++GPPGCSKTL A+A+A+EAGLNF+AVKGPELF+ ++GESE+AVR +F KA
Sbjct: 414  GGTPRKGLLLYGPPGCSKTLTAKALATEAGLNFIAVKGPELFNMYLGESERAVREVFRKA 473

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDR--VMSQLLVELDGLHQRVNVTVIAATNR 922
            RA +PSIIFFDEID L+A R     G     +  V++ LL E+DG+     VT++AATNR
Sbjct: 474  RAASPSIIFFDEIDALSASRDGGGGGGGGGGKTNVLTTLLNEMDGIEVLKGVTILAATNR 533

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            P+ IDPALLRPGR D +LYVGPP+   RE+I +I   K+  S+DV++  LA  +EG +GA
Sbjct: 534  PEIIDPALLRPGRLDTILYVGPPDLPAREQILQIKTGKMSISTDVDLGHLAEATEGFSGA 593

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            ++   C EA   A+ E+     +  +H + A+    P
Sbjct: 594  EVVNTCDEAIHYAMRESFFIEAVCARHFEAALERAVP 630



 Score =  147 bits (370), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 131/226 (57%), Gaps = 19/226 (8%)

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            H   F +    PP GIL++GPPG  KTL+ +A+ASE       + G  +  K++GESE A
Sbjct: 121  HSHLFTKHNLTPPRGILLYGPPGTGKTLLLKAIASEISAKCYVLNG-SVIGKYLGESEAA 179

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGL-------H 909
            +R +FA+AR N P+++F DE D +A  RG E DG     R++S +L E+DG+        
Sbjct: 180  IRKVFAEARKNQPAVVFMDEADSIACKRG-EGDGNE--GRIVSTILTEIDGMSCGDSDGV 236

Query: 910  QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS---- 965
            + V + V+A T+RP+ ID AL RPGRFDR + +G P+   R EI  I  RKI  S+    
Sbjct: 237  EVVKLVVVATTSRPNVIDQALRRPGRFDREIEIGIPDADSRREILEILTRKIDFSNEQPK 296

Query: 966  DVNIRELACLSEGCTGADISLICREAAISAI----EENLDASRITM 1007
            +  I+ LA  + G  GAD+  + R A  SA+     ++LD S +T+
Sbjct: 297  EAIIKALAAKTHGFVGADLEELVRTAFTSALTRLERDDLDPSALTL 342



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 125/215 (58%), Gaps = 19/215 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T S LG  P KG+LL+GPPG  KT  A+  A ++G+N   V GPE+ +   GESE+A+ E
Sbjct: 409 TFSRLGGTPRKGLLLYGPPGCSKTLTAKALATEAGLNFIAVKGPELFNMYLGESERAVRE 468

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           VF  A  ++P+++F DE+DA++ +R      GG      ++ TLLN MDG+    GV ++
Sbjct: 469 VFRKARAASPSIIFFDEIDALSASRDGGGGGGGGGGKTNVLTTLLNEMDGIEVLKGVTIL 528

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           AATNRP+ I+PAL RPGRLD           ++L   P  +P+  Q L+I     +G   
Sbjct: 529 AATNRPEIIDPALLRPGRLD-----------TILYVGPPDLPAREQILQI----KTGKMS 573

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              D ++ +L+ AT GF GA++   C+EA    +R
Sbjct: 574 ISTDVDLGHLAEATEGFSGAEVVNTCDEAIHYAMR 608



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/282 (36%), Positives = 155/282 (54%), Gaps = 32/282 (11%)

Query: 409 DISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           + S +GGL+ + A LK +++S+   S L +   L P +G+LL+GPPGTGKT L +  A +
Sbjct: 97  NFSSIGGLAPQIAALKTLLLSTLHHSHLFTKHNLTPPRGILLYGPPGTGKTLLLKAIASE 156

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-GEEL 526
                + +NG  V+ +  GESE A+ +VF  A ++ PAVVF+DE D+IA  R +G G E 
Sbjct: 157 ISAKCYVLNG-SVIGKYLGESEAAIRKVFAEARKNQPAVVFMDEADSIACKRGEGDGNE- 214

Query: 527 SQRMVATLLNLMDGVC--RTDG-----VLVIAATNRPDSIEPALRRPGRLDREIEIDMSF 579
             R+V+T+L  +DG+    +DG     ++V+A T+RP+ I+ ALRRPGR DREIEI    
Sbjct: 215 -GRIVSTILTEIDGMSCGDSDGVEVVKLVVVATTSRPNVIDQALRRPGRFDREIEI---- 269

Query: 580 LFSLLKNSPAAVPSPAQRLEILHALLSGMEHS---LLDSEVEYLSMATHGFVGADLAALC 636
                      +P    R EIL  L   ++ S     ++ ++ L+  THGFVGADL  L 
Sbjct: 270 ----------GIPDADSRREILEILTRKIDFSNEQPKEAIIKALAAKTHGFVGADLEELV 319

Query: 637 NEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSD 678
             A    L R  +       L  + T    + H   +L+++D
Sbjct: 320 RTAFTSALTRLERDDLDPSALTLSDTP---QTHPQFLLREAD 358


>gi|448387832|ref|ZP_21564860.1| hypothetical protein C477_01420 [Haloterrigena salina JCM 13891]
 gi|445671224|gb|ELZ23816.1| hypothetical protein C477_01420 [Haloterrigena salina JCM 13891]
          Length = 762

 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 140/289 (48%), Positives = 194/289 (67%), Gaps = 11/289 (3%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A   + PSAMREV++EVP V W+DVGG  E K +L E+V+WP  H +A++++G  P
Sbjct: 452  DFKSALRGIEPSAMREVLVEVPDVTWDDVGGLEEAKERLRESVQWPMDHADAYEQVGLEP 511

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+L+ GPPG  KTL+A+AVA+E+  NF++VKGPELF K+VGESEK VR +F+KAR NA
Sbjct: 512  AKGVLLHGPPGTGKTLLAKAVANESQSNFISVKGPELFDKYVGESEKGVREIFSKARENA 571

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+FFDEID +A+ RG      +V +RV+SQLL ELDGL +  +V VIAA+NRP+ ID 
Sbjct: 572  PTIVFFDEIDAIASERGSGVGDSNVGERVVSQLLTELDGLEELEDVVVIAASNRPELIDE 631

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR + V  P+E  R EI  IH    P +  V++ +LA  +EG TGAD+  +C
Sbjct: 632  ALLRPGRLDRHVAVDEPDERARREIVAIHTEDRPLADGVDLDDLAAETEGYTGADVEAVC 691

Query: 989  REAAISAIEENLDAS-----------RITMQHLKTAIRHVQPSEIHSYK 1026
            REAA  A+ E++ A             +T +H + A+  + P     ++
Sbjct: 692  REAATIAVREHVRAEAEGEDRDVEEIALTAEHFERALEEISPESAAEFE 740



 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 114/268 (42%), Positives = 166/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E P V +EDVGG  +   ++ E +E P  H E F+ +G  PP G+L+ GPPG  KTL+AR
Sbjct: 198  ESPNVTYEDVGGLDDELERVREMIELPMCHPELFRALGIEPPKGVLLHGPPGTGKTLIAR 257

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   +FL + GPE+ SK+ GESE+ +R +F +A  N P+I+F DE+D +A  R +E
Sbjct: 258  AVANEVDAHFLTISGPEIMSKYYGESEEQLREVFEEAAENEPAIVFIDELDSIAPKR-EE 316

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G     RV++QLL  +DGL QR  +TVI  TNR D IDPAL RPGRFDR + +G P+ 
Sbjct: 317  VQG-DTERRVVAQLLSLMDGLEQRGEITVIGTTNRVDDIDPALRRPGRFDREIEIGVPDA 375

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA---------IEE 998
              REEI +IH R +P + ++++   A  + G  GAD+  + +EAA++A         +EE
Sbjct: 376  AGREEILQIHTRGMPVAEEIDLERYAENTHGFVGADLENVAKEAAMTAMRRVRPELDLEE 435

Query: 999  N------LDASRITMQHLKTAIRHVQPS 1020
                   L+   +T +  K+A+R ++PS
Sbjct: 436  AEIPANVLEEIEVTAEDFKSALRGIEPS 463



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/235 (45%), Positives = 149/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +         +LG+ P KGVLLHGPPGTGKT +AR  A++   +
Sbjct: 207 VGGLDDELERVREMIELPMCHPELFRALGIEPPKGVLLHGPPGTGKTLIARAVANEVDAH 266

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A+++ PA+VFIDELD+IAP R++   +  +R+V
Sbjct: 267 FLTISGPEIMSKYYGESEEQLREVFEEAAENEPAIVFIDELDSIAPKREEVQGDTERRVV 326

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+ +   + VI  TNR D I+PALRRPGR DREIEI               V
Sbjct: 327 AQLLSLMDGLEQRGEITVIGTTNRVDDIDPALRRPGRFDREIEI--------------GV 372

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P  A R EIL     GM  +  + ++E  +  THGFVGADL  +  EAA+  +RR
Sbjct: 373 PDAAGREEILQIHTRGMPVA-EEIDLERYAENTHGFVGADLENVAKEAAMTAMRR 426



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/220 (40%), Positives = 131/220 (59%), Gaps = 19/220 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +GL P KGVLLHGPPGTGKT LA+  A++S  N  +V GPE+  +  GESE+ + E+F  
Sbjct: 507 VGLEPAKGVLLHGPPGTGKTLLAKAVANESQSNFISVKGPELFDKYVGESEKGVREIFSK 566

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A ++AP +VF DE+DAIA  R    G   + +R+V+ LL  +DG+   + V+VIAA+NRP
Sbjct: 567 ARENAPTIVFFDEIDAIASERGSGVGDSNVGERVVSQLLTELDGLEELEDVVVIAASNRP 626

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS- 615
           + I+ AL RPGRLDR + +D               P    R EI+   +   +  L D  
Sbjct: 627 ELIDEALLRPGRLDRHVAVDE--------------PDERARREIV--AIHTEDRPLADGV 670

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
           +++ L+  T G+ GAD+ A+C EAA + +R + + +   +
Sbjct: 671 DLDDLAAETEGYTGADVEAVCREAATIAVREHVRAEAEGE 710


>gi|21226350|ref|NP_632272.1| cell division cycle protein [Methanosarcina mazei Go1]
 gi|20904601|gb|AAM29944.1| Cell division cycle protein [Methanosarcina mazei Go1]
          Length = 764

 Score =  289 bits (739), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 137/279 (49%), Positives = 188/279 (67%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   DFE A   V+PSA+RE+++EVP + W+DVGG  EVK  L EAVEWP K  E++
Sbjct: 456  SLQVTREDFENALKDVQPSAIREILIEVPNIGWDDVGGLGEVKELLKEAVEWPLKSPESY 515

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + IG   P G+L++GPPG  KTL+A+A+A E+  NF+  KG +L SKW GESEK +  +F
Sbjct: 516  RNIGVEAPKGVLLYGPPGTGKTLLAKAIAHESDANFITAKGSDLLSKWYGESEKRIAEVF 575

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             +AR  APSIIF DE+D LA +RG  +    V+ R+++QLL E+DGL +   V VI ATN
Sbjct: 576  TRARQVAPSIIFLDELDSLAPVRGASTGEPQVTARILNQLLSEMDGLEELRAVVVIGATN 635

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD IDPALLRPGRFD L+ V  P+E  R EIFR+H   +  + DV+I +L  L++  TG
Sbjct: 636  RPDMIDPALLRPGRFDELILVPVPDEGARREIFRVHTENMALAEDVDIEKLVSLTDQYTG 695

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            ADI+ +C++A   A+ E+L A  +  +H   AI    PS
Sbjct: 696  ADIAAVCKKAGRYALREDLHAKSVRQKHFLQAIEETGPS 734



 Score =  235 bits (600), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/270 (43%), Positives = 173/270 (64%), Gaps = 17/270 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P V +ED+GG ++   ++ E +E P KH E F R+G   P G+L+ GPPG  KT++A+A
Sbjct: 210  IPTVMYEDLGGLKDAIGRVREMIELPLKHPELFDRLGIDAPKGVLLHGPPGTGKTMLAKA 269

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E+   F+++ GPE+ SK+ GESE+A+R +F  A  NAP+IIF DEID +A  R + +
Sbjct: 270  VANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIFLDEIDSIAPKRAEVT 329

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V  RV++QLL  +DGL  R NV VI +TNRP+ ID AL RPGRFDR + +  P+  
Sbjct: 330  G--EVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEAIDIALRRPGRFDREIELRVPDTE 387

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EIF+IH R +P + +VN+ + A ++ G  GADI+ +CREAA+SA+            
Sbjct: 388  GRLEIFQIHTRGMPLADNVNLMDFAQITYGFVGADIAALCREAAMSALRRILPKINLNEP 447

Query: 998  ----ENLDASRITMQHLKTAIRHVQPSEIH 1023
                E LD+ ++T +  + A++ VQPS I 
Sbjct: 448  EIPGEILDSLQVTREDFENALKDVQPSAIR 477



 Score =  202 bits (515), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 155/250 (62%), Gaps = 23/250 (9%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           QN+   + +D   LGGL      ++++I +          LG+   KGVLLHGPPGTGKT
Sbjct: 208 QNIPTVMYED---LGGLKDAIGRVREMIELPLKHPELFDRLGIDAPKGVLLHGPPGTGKT 264

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            LA+  A++S     ++NGPE++S+ YGESE+A+ E+F+ A ++APA++F+DE+D+IAP 
Sbjct: 265 MLAKAVANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIFLDEIDSIAPK 324

Query: 519 RKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
           R +   E+ +R+VA LL+LMDG+     V+VI +TNRP++I+ ALRRPGR DREIE+   
Sbjct: 325 RAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEAIDIALRRPGRFDREIEL--- 381

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALC 636
                       VP    RLEI      GM    L   V  +  A  T+GFVGAD+AALC
Sbjct: 382 -----------RVPDTEGRLEIFQIHTRGMP---LADNVNLMDFAQITYGFVGADIAALC 427

Query: 637 NEAALVCLRR 646
            EAA+  LRR
Sbjct: 428 REAAMSALRR 437



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 137/237 (57%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDIIISSSVKS--TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           +GGL +   +LK+ +    +KS  +  ++G+   KGVLL+GPPGTGKT LA+  AH+S  
Sbjct: 491 VGGLGEVKELLKEAV-EWPLKSPESYRNIGVEAPKGVLLYGPPGTGKTLLAKAIAHESDA 549

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQ 528
           N  T  G +++S+ YGESE+ + EVF  A Q AP+++F+DELD++AP R    G  +++ 
Sbjct: 550 NFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPVRGASTGEPQVTA 609

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R++  LL+ MDG+     V+VI ATNRPD I+PAL RPGR D  I +             
Sbjct: 610 RILNQLLSEMDGLEELRAVVVIGATNRPDMIDPALLRPGRFDELILV------------- 656

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             VP    R EI       M  +  D ++E L   T  + GAD+AA+C +A    LR
Sbjct: 657 -PVPDEGARREIFRVHTENMALA-EDVDIEKLVSLTDQYTGADIAAVCKKAGRYALR 711


>gi|388579101|gb|EIM19430.1| AAA-domain-containing protein [Wallemia sebi CBS 633.66]
          Length = 729

 Score =  288 bits (738), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 131/269 (48%), Positives = 194/269 (72%), Gaps = 3/269 (1%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L++ D   A   +RPSA+R V L +P+ ++ D+ GQ  VK  L ++V WPQ+H + F R+
Sbjct: 437  LQVQDLVDALPHIRPSALRSVQLTLPETRFSDIAGQEHVKKSLEQSVIWPQRHADTFVRL 496

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G  PP G+L++GPPGCSKTL A+A+A E+G+NFLAVKGPEL  K+VG SE+A+R +FAKA
Sbjct: 497  GLTPPRGVLLYGPPGCSKTLAAKALAGESGINFLAVKGPELLDKFVGGSERAIRDIFAKA 556

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            RA APSIIFFDEID +A+ R    D  S +  +++ +L E+DG+ +   VTV+AATN+P 
Sbjct: 557  RAAAPSIIFFDEIDSIASAR---DDNSSTTSGMVASMLNEMDGIEELNGVTVLAATNKPQ 613

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
             IDPAL+RPGR DR++YVGPP +  R+++F + L K+     +++ EL+ +++GC+GA+I
Sbjct: 614  VIDPALMRPGRLDRIIYVGPPEQEARKQLFALRLAKMTVEEGIDLDELSKMTQGCSGAEI 673

Query: 985  SLICREAAISAIEENLDASRITMQHLKTA 1013
              IC++AA+ A++E+L+A  +  QH   A
Sbjct: 674  VSICQDAAMRAMQESLNAEHVKKQHFIDA 702



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/264 (37%), Positives = 149/264 (56%), Gaps = 33/264 (12%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLSK+   + D+I +  +     +   ++P KG+LLHGPPGTGKT LAR  A    + 
Sbjct: 197 IGGLSKQINEISDLIGLPLNYPDLFTRFAVKPPKGLLLHGPPGTGKTLLARSAATILSLP 256

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSA---SQSAPAVVFIDELDAIAPARKDGGE--EL 526
           +  VNGPE+ S  +GE+E  L +VF  A   +Q+   +V IDE+D + P+R   G   E+
Sbjct: 257 ILLVNGPELSSAYHGETEDNLRKVFTHARSLTQNKGVIVVIDEIDTLCPSRDGDGSTGEV 316

Query: 527 SQRMVATLLNLMDGV-----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
            +R+VATLL  +DG+       +  V +I  TNRP++++ ALRRPGRLDREIE+      
Sbjct: 317 EKRVVATLLTELDGMNNGKDTNSPSVFLIGTTNRPNALDSALRRPGRLDREIEV------ 370

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
                    +P  +QR EIL   ++ M  ++   ++  ++  THGFVGADL++L   A+ 
Sbjct: 371 --------GIPDASQRYEILTKQINSMPRNVTAEDIHSVATKTHGFVGADLSSLVRAAST 422

Query: 642 VCLRR--------YSKIQTSSDVL 657
             ++R        Y ++Q   D L
Sbjct: 423 RAIKRSIEEKTDAYLQVQDLVDAL 446



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 143/263 (54%), Gaps = 14/263 (5%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 836
            +GG  +   ++ + +  P  + + F R   +PP G+L+ GPPG  KTL+AR+ A+   L 
Sbjct: 197  IGGLSKQINEISDLIGLPLNYPDLFTRFAVKPPKGLLLHGPPGTGKTLLARSAATILSLP 256

Query: 837  FLAVKGPELFSKWVGESEKAVRSLFAKARA---NAPSIIFFDEIDGLAAIRGKESDGVSV 893
             L V GPEL S + GE+E  +R +F  AR+   N   I+  DEID L   R  +     V
Sbjct: 257  ILLVNGPELSSAYHGETEDNLRKVFTHARSLTQNKGVIVVIDEIDTLCPSRDGDGSTGEV 316

Query: 894  SDRVMSQLLVELDGLHQRVN-----VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
              RV++ LL ELDG++   +     V +I  TNRP+ +D AL RPGR DR + VG P+ +
Sbjct: 317  EKRVVATLLTELDGMNNGKDTNSPSVFLIGTTNRPNALDSALRRPGRLDREIEVGIPDAS 376

Query: 949  DREEIFRIHLRKIPCSSDV-NIRELACLSEGCTGADISLICREAAISA----IEENLDAS 1003
             R EI    +  +P +    +I  +A  + G  GAD+S + R A+  A    IEE  DA 
Sbjct: 377  QRYEILTKQINSMPRNVTAEDIHSVATKTHGFVGADLSSLVRAASTRAIKRSIEEKTDAY 436

Query: 1004 RITMQHLKTAIRHVQPSEIHSYK 1026
             + +Q L  A+ H++PS + S +
Sbjct: 437  -LQVQDLVDALPHIRPSALRSVQ 458



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 173/340 (50%), Gaps = 40/340 (11%)

Query: 323 VAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNA 382
           V +P  S+    L    N +P ++T E        S+  +++ FV    + +       A
Sbjct: 370 VGIPDASQRYEILTKQINSMPRNVTAED-----IHSVATKTHGFVGADLSSLVRAASTRA 424

Query: 383 VSKSLREGTLPNAQIE-------------FQNVQATV-EQDISKLGGLSK-EYAILKDII 427
           + +S+ E T    Q++              ++VQ T+ E   S + G    + ++ + +I
Sbjct: 425 IKRSIEEKTDAYLQVQDLVDALPHIRPSALRSVQLTLPETRFSDIAGQEHVKKSLEQSVI 484

Query: 428 ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGE 487
                  T   LGL P +GVLL+GPPG  KT  A+  A +SG+N   V GPE++ +  G 
Sbjct: 485 WPQRHADTFVRLGLTPPRGVLLYGPPGCSKTLAAKALAGESGINFLAVKGPELLDKFVGG 544

Query: 488 SEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGV 547
           SE+A+ ++F  A  +AP+++F DE+D+IA AR D     S  MVA++LN MDG+   +GV
Sbjct: 545 SERAIRDIFAKARAAAPSIIFFDEIDSIASARDDNSSTTSG-MVASMLNEMDGIEELNGV 603

Query: 548 LVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSG 607
            V+AATN+P  I+PAL RPGRLDR I +                P    R ++    L+ 
Sbjct: 604 TVLAATNKPQVIDPALMRPGRLDRIIYV--------------GPPEQEARKQLFALRLAK 649

Query: 608 M--EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           M  E  +   +++ LS  T G  GA++ ++C +AA+  ++
Sbjct: 650 MTVEEGI---DLDELSKMTQGCSGAEIVSICQDAAMRAMQ 686


>gi|336252176|ref|YP_004595283.1| AAA family ATPase [Halopiger xanaduensis SH-6]
 gi|335336165|gb|AEH35404.1| AAA family ATPase, CDC48 subfamily [Halopiger xanaduensis SH-6]
          Length = 753

 Score =  288 bits (738), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 142/307 (46%), Positives = 205/307 (66%), Gaps = 16/307 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   DF++A   ++PSAMREV +EVP V W+DVGG  + K +L E ++WP  + E F
Sbjct: 431  SLQVTERDFKEALKGIQPSAMREVFVEVPDVTWDDVGGLEDTKERLRETIQWPLDYPEVF 490

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++  +   G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 491  EQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVF 550

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+NAP++IFFDEID +A  RG++     V +RV+SQLL ELDGL +  +V VIA TN
Sbjct: 551  EKARSNAPTVIFFDEIDSIAGQRGRQQGDSGVGERVVSQLLTELDGLEELEDVVVIATTN 610

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R++IF +H R  P +  V++  LA  +EG  G
Sbjct: 611  RPDLIDQALLRPGRLDRHVHVPVPDEGARKKIFEVHTRDKPLADSVDLDWLAEETEGYVG 670

Query: 982  ADISLICREAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEI----HSY 1025
            ADI  +CREA+++A  E +++             RI+ +H + A+  V PS        Y
Sbjct: 671  ADIEAVCREASMAASREFINSVDPEEMADTIGNVRISKEHFEHALEEVNPSVTPETREQY 730

Query: 1026 KELSAKF 1032
            +E+  +F
Sbjct: 731  EEIEEQF 737



 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 170/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPDVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR--ED 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEIGVPDKG 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EE 998
             R+EI ++H R +P    +++ + A  + G  GAD+  + RE A++A+          E+
Sbjct: 363  GRKEILQVHTRGMPLQDGIDLDQYAESTHGFVGADLESLAREGAMNALRRIRPDLDLEED 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T +  K A++ +QPS
Sbjct: 423  EIDAEVLESLQVTERDFKEALKGIQPS 449



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 149/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R+D G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKREDAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L D  +++  + +THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKGGRKEILQVHTRGM--PLQDGIDLDQYAESTHGFVGADLESLAREGAMNALRR 412



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 158/293 (53%), Gaps = 25/293 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I            + ++  KGVL++GPPGTGKT LA+  A+++  N
Sbjct: 466 VGGLEDTKERLRETIQWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSN 525

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQR 529
             ++ GPE++++  GESE+ + EVF+ A  +AP V+F DE+D+IA    R+ G   + +R
Sbjct: 526 FISIKGPELLNKYVGESEKGVREVFEKARSNAPTVIFFDEIDSIAGQRGRQQGDSGVGER 585

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +              
Sbjct: 586 VVSQLLTELDGLEELEDVVVIATTNRPDLIDQALLRPGRLDRHVHV-------------- 631

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            VP    R +I    +   +  L DS ++++L+  T G+VGAD+ A+C EA++   R + 
Sbjct: 632 PVPDEGARKKIFE--VHTRDKPLADSVDLDWLAEETEGYVGADIEAVCREASMAASREFI 689

Query: 649 KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCS-----RNITESSRDCLDSASP 696
                 ++  + G +   + H +  L++ + S     R   E   +  D+A P
Sbjct: 690 NSVDPEEMADTIGNVRISKEHFEHALEEVNPSVTPETREQYEEIEEQFDTAEP 742


>gi|254569058|ref|XP_002491639.1| ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric
            complex [Komagataella pastoris GS115]
 gi|238031436|emb|CAY69359.1| ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric
            complex [Komagataella pastoris GS115]
 gi|328351856|emb|CCA38255.1| ATPase family gene 2 protein [Komagataella pastoris CBS 7435]
          Length = 763

 Score =  288 bits (738), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 139/302 (46%), Positives = 208/302 (68%), Gaps = 10/302 (3%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+ L D E A + +RPSAMRE+ LE PK+ W D+GGQ  VK +L E VE P    E+F
Sbjct: 463  SLKIGLSDVENAMLDIRPSAMREIFLETPKISWTDIGGQEVVKQKLKEMVELPLIAAESF 522

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +R+G   P G+L++GPPGCSKTL A+A+ASE+GLNFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 523  QRLGVSAPKGLLLYGPPGCSKTLTAKALASESGLNFLAVKGPEIFNKYVGESERAIREVF 582

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KARA APSIIFFDEID L+  R  +++  + S+ V++ LL E+DG+ +   V ++ ATN
Sbjct: 583  RKARAAAPSIIFFDEIDALSNTR-DDNNNTTASNNVLTSLLNEIDGVEELKGVVILGATN 641

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIR-----ELACLS 976
            RPD IDPALLRPGR DR +YV PP+   R +I     +      + + R      L+ L+
Sbjct: 642  RPDAIDPALLRPGRLDRHIYVPPPDAAARYQILDNSTKNFGLGGNEDERGKLLTLLSELT 701

Query: 977  EGCTGADISLICREAAISAIEENLDASRITMQHLKTAIR----HVQPSEIHSYKELSAKF 1032
            EGC+GA++ L+C+E+ ++A+ E+ +A ++ ++H + ++     ++ P  I  Y++ + ++
Sbjct: 702  EGCSGAEVVLLCQESGLAAVMEDTNAEKVELRHFQKSLDDLSLNITPEMIAFYEDFAKRY 761

Query: 1033 QR 1034
             R
Sbjct: 762  SR 763



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 94/241 (39%), Positives = 148/241 (61%), Gaps = 17/241 (7%)

Query: 409 DISKLGGLSKEYAILK-DIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           D S++GGL K+  +LK  + +        ++ G+ P +G+LLHGPPGTGKT L R  A++
Sbjct: 228 DYSQIGGLQKQIELLKTSVSLPLHQPDLFTNFGITPPRGILLHGPPGTGKTMLLRAVANE 287

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-DGGEEL 526
              ++ T+NGP V+S+  GE+E  + ++F  A    P+++FIDE+DA+AP+R  D   E 
Sbjct: 288 ENAHVLTINGPSVISKYLGETESTIRDMFREAELYQPSIIFIDEIDALAPSRNSDDAGET 347

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
             R+VA+LL LMDG+     V+++ ATNRP++I+ ALRRPGR D+E+E+           
Sbjct: 348 ESRIVASLLTLMDGMGNAGRVVLVGATNRPNAIDQALRRPGRFDQEVEV----------- 396

Query: 587 SPAAVPSPAQRLEILHALLSGM-EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
               +P  A R +IL+     M  H + + +++ ++  THG+VGADL ALC E  +  ++
Sbjct: 397 ---GIPDVAARYDILNLQFKKMRRHEISEQDIKEIASKTHGYVGADLVALCRETVMKAIK 453

Query: 646 R 646
           R
Sbjct: 454 R 454



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/256 (37%), Positives = 149/256 (58%), Gaps = 8/256 (3%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +  +GG ++    L  +V  P    + F   G  PP GIL+ GPPG  KT++ RAVA+
Sbjct: 227  VDYSQIGGLQKQIELLKTSVSLPLHQPDLFTNFGITPPRGILLHGPPGTGKTMLLRAVAN 286

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   + L + GP + SK++GE+E  +R +F +A    PSIIF DEID LA  R  +  G 
Sbjct: 287  EENAHVLTINGPSVISKYLGETESTIRDMFREAELYQPSIIFIDEIDALAPSRNSDDAGE 346

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            + S R+++ LL  +DG+     V ++ ATNRP+ ID AL RPGRFD+ + VG P+   R 
Sbjct: 347  TES-RIVASLLTLMDGMGNAGRVVLVGATNRPNAIDQALRRPGRFDQEVEVGIPDVAARY 405

Query: 952  EIFRIHLRKIPCS--SDVNIRELACLSEGCTGADISLICREAAISAIE-----ENLDASR 1004
            +I  +  +K+     S+ +I+E+A  + G  GAD+  +CRE  + AI+      NLD+ +
Sbjct: 406  DILNLQFKKMRRHEISEQDIKEIASKTHGYVGADLVALCRETVMKAIKRGLDFHNLDSLK 465

Query: 1005 ITMQHLKTAIRHVQPS 1020
            I +  ++ A+  ++PS
Sbjct: 466  IGLSDVENAMLDIRPS 481



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 102/157 (64%), Gaps = 4/157 (2%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           +   LG+   KG+LL+GPPG  KT  A+  A +SG+N   V GPE+ ++  GESE+A+ E
Sbjct: 521 SFQRLGVSAPKGLLLYGPPGCSKTLTAKALASESGLNFLAVKGPEIFNKYVGESERAIRE 580

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEEL-SQRMVATLLNLMDGVCRTDGVLVIAAT 553
           VF  A  +AP+++F DE+DA++  R D      S  ++ +LLN +DGV    GV+++ AT
Sbjct: 581 VFRKARAAAPSIIFFDEIDALSNTRDDNNNTTASNNVLTSLLNEIDGVEELKGVVILGAT 640

Query: 554 NRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNS 587
           NRPD+I+PAL RPGRLDR I +   D +  + +L NS
Sbjct: 641 NRPDAIDPALLRPGRLDRHIYVPPPDAAARYQILDNS 677


>gi|448592558|ref|ZP_21651665.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            elongans ATCC BAA-1513]
 gi|445731563|gb|ELZ83147.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            elongans ATCC BAA-1513]
          Length = 752

 Score =  288 bits (738), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 149/323 (46%), Positives = 208/323 (64%), Gaps = 17/323 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   DF++A     PSA+REV +EVP V WEDVGG  + K +L E ++WP ++ E F
Sbjct: 430  SLRVTEDDFKEALKSTEPSALREVFVEVPDVTWEDVGGLGDTKERLRETIQWPLEYPEVF 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 490  EKMDMAAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +AA RG +S    V++RV+SQLL ELDGL    +V VIA TN
Sbjct: 550  KKARENAPTVVFFDEIDSIAAERGSDSTSSGVTERVVSQLLTELDGLESLEDVVVIATTN 609

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  I  +H    P + DV++ ++A  ++G  G
Sbjct: 610  RPDLIDAALLRPGRLDRHVHVPVPDEDARRAILDVHTEHKPLADDVDLDKIASRTDGYVG 669

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS---EI-HSY 1025
            ADI  +CREA+++A            IEE++   R+TM H   A+  V PS   E+   Y
Sbjct: 670  ADIEALCREASMNASREFITSVEKDEIEESIGNVRVTMDHFVDALDEVGPSVTDEVRRRY 729

Query: 1026 KELSAKF-QRLVHSNAEADESGY 1047
             E+  +F Q  V    EA  + Y
Sbjct: 730  DEIEERFHQSEVQHEDEAGRTFY 752



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 163/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  RG+   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREIFDEATENSPAIVFIDEIDSIAPKRGEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDTALRRGGRFDREIEIGVPDRDG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + +V++   A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEILQVHTRNMPLTDEVDLDSYADNTHGFVGADLESLAKESAMHALRRIRPELDLEAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      R+T    K A++  +PS
Sbjct: 423  IDAEVLESLRVTEDDFKEALKSTEPS 448



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/270 (44%), Positives = 159/270 (58%), Gaps = 34/270 (12%)

Query: 394 NAQIEFQNVQATVEQ--DIS------------KLGGLSKEYAILKDII-ISSSVKSTLSS 438
           N   EFQ  Q   EQ  D S             +GGL KE   ++++I +          
Sbjct: 159 NDNTEFQVSQKPAEQIADTSSGTSDGPSVTYEDIGGLDKELEQVREMIELPMRHPELFKR 218

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P KGVLLHGPPGTGKT +A+  A++   +  T++GPE++S+ YGESE+ L E+FD 
Sbjct: 219 LGIEPPKGVLLHGPPGTGKTLIAKAVANEIDASFHTISGPEIMSKYYGESEEQLREIFDE 278

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A++++PA+VFIDE+D+IAP R + G ++ +R+VA LL+LMDG+     V+VI ATNR D+
Sbjct: 279 ATENSPAIVFIDEIDSIAPKRGEAGGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDA 338

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           I+ ALRR GR DREIEI               VP    R EIL      M    L  EV+
Sbjct: 339 IDTALRRGGRFDREIEI--------------GVPDRDGRKEILQVHTRNMP---LTDEVD 381

Query: 619 YLSMA--THGFVGADLAALCNEAALVCLRR 646
             S A  THGFVGADL +L  E+A+  LRR
Sbjct: 382 LDSYADNTHGFVGADLESLAKESAMHALRR 411



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 146/295 (49%), Gaps = 48/295 (16%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 488 VFEKMDMAAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 547

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP VVF DE+D+IA  R        +++R+V+ LL  +DG+   + V+VIA 
Sbjct: 548 VFKKARENAPTVVFFDEIDSIAAERGSDSTSSGVTERVVSQLLTELDGLESLEDVVVIAT 607

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  IL       EH  
Sbjct: 608 TNRPDLIDAALLRPGRLDRHVHV--------------PVPDEDARRAILDV---HTEHKP 650

Query: 613 L--DSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHS 670
           L  D +++ ++  T G+VGAD+ ALC EA++   R +       ++  S G +       
Sbjct: 651 LADDVDLDKIASRTDGYVGADIEALCREASMNASREFITSVEKDEIEESIGNV------- 703

Query: 671 DTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHN 725
                     R   +   D LD   P  +D           +R    EI + FH 
Sbjct: 704 ----------RVTMDHFVDALDEVGPSVTD----------EVRRRYDEIEERFHQ 738


>gi|448436569|ref|ZP_21587149.1| ATPase AAA [Halorubrum tebenquichense DSM 14210]
 gi|445682350|gb|ELZ34768.1| ATPase AAA [Halorubrum tebenquichense DSM 14210]
          Length = 755

 Score =  288 bits (738), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/302 (47%), Positives = 199/302 (65%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   + PSA+REV +EVP V W+ VGG    K +L E ++WP ++ E F+ +  + 
Sbjct: 439  DFKQAIKGIEPSALREVFVEVPDVTWDQVGGLEGTKERLRETIQWPLEYPEVFEELDMQA 498

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+E+  NF+++KGPEL +K+VGESEK VR +F+KAR NA
Sbjct: 499  AKGVLMYGPPGTGKTLLAKAVANESESNFISIKGPELLNKYVGESEKGVREVFSKARENA 558

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+FFDEID +A  RGK S    V +RV+SQLL ELDGL    +V VIA TNRPD ID 
Sbjct: 559  PTIVFFDEIDSIATERGKNSGDSGVGERVVSQLLTELDGLESLEDVVVIATTNRPDLIDS 618

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+ET R  IF +H R  P + DV++  LA  ++G  GADI  + 
Sbjct: 619  ALLRPGRLDRHVHVPVPDETARRRIFEVHTRDKPLADDVDLDALARKTDGYVGADIEAVA 678

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            + E++   R+TM+H + A+  V PS        Y+E+  +F
Sbjct: 679  REASMNASREFIGSVSREEVGESVGNVRVTMEHFEDALSEVNPSVTPETRERYEEIEKQF 738

Query: 1033 QR 1034
            +R
Sbjct: 739  KR 740



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 113/266 (42%), Positives = 163/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 187  PDVAYEDIGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAV 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   NF  + GPE+ SK+ GESE+ +R +F +A  +APSIIF DE+D +A  R  E  
Sbjct: 247  ANEIDANFHTISGPEIMSKYYGESEEQLRDVFEEAAEDAPSIIFMDELDSIAPKR--EEA 304

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + VG P+   
Sbjct: 305  GGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEVGVPDRDG 364

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P +  +++ E A  + G  GAD+  + +E+A+ A+           + 
Sbjct: 365  RKEILQVHTRNMPLTDGIDLDEYAENTHGFVGADLESLAKESAMHALRRIRPEIDLESDE 424

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K AI+ ++PS
Sbjct: 425  IDADVLNSIQVTEDDFKQAIKGIEPS 450



 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 104/236 (44%), Positives = 149/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 194 IGGLDDELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAN 253

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L +VF+ A++ AP+++F+DELD+IAP R++ G ++ +R+V
Sbjct: 254 FHTISGPEIMSKYYGESEEQLRDVFEEAAEDAPSIIFMDELDSIAPKREEAGGDVERRVV 313

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIE+               V
Sbjct: 314 AQLLSLMDGLEERGEVVVIGATNRVDAIDQALRRGGRFDREIEV--------------GV 359

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL      M   L D  +++  +  THGFVGADL +L  E+A+  LRR
Sbjct: 360 PDRDGRKEILQVHTRNM--PLTDGIDLDEYAENTHGFVGADLESLAKESAMHALRR 413



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 143/257 (55%), Gaps = 20/257 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            ++GGL      L++ I            L ++  KGVL++GPPGTGKT LA+  A++S 
Sbjct: 465 DQVGGLEGTKERLRETIQWPLEYPEVFEELDMQAAKGVLMYGPPGTGKTLLAKAVANESE 524

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEE-LS 527
            N  ++ GPE++++  GESE+ + EVF  A ++AP +VF DE+D+IA  R K+ G+  + 
Sbjct: 525 SNFISIKGPELLNKYVGESEKGVREVFSKARENAPTIVFFDEIDSIATERGKNSGDSGVG 584

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 585 ERVVSQLLTELDGLESLEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 632

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP    R  I    +   +  L D  +++ L+  T G+VGAD+ A+  EA++   R 
Sbjct: 633 --PVPDETARRRIFE--VHTRDKPLADDVDLDALARKTDGYVGADIEAVAREASMNASRE 688

Query: 647 YSKIQTSSDVLHSTGTL 663
           +    +  +V  S G +
Sbjct: 689 FIGSVSREEVGESVGNV 705


>gi|300710324|ref|YP_003736138.1| hypothetical protein HacjB3_04775 [Halalkalicoccus jeotgali B3]
 gi|448294650|ref|ZP_21484729.1| hypothetical protein C497_03142 [Halalkalicoccus jeotgali B3]
 gi|299124007|gb|ADJ14346.1| hypothetical protein HacjB3_04775 [Halalkalicoccus jeotgali B3]
 gi|445586327|gb|ELY40609.1| hypothetical protein C497_03142 [Halalkalicoccus jeotgali B3]
          Length = 723

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 136/255 (53%), Positives = 180/255 (70%)

Query: 742 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
           +L++   D   A   V PSA+REV +E+P V W+DVGG    K +L E V+WP  + EAF
Sbjct: 426 SLRITDADVRSALRSVEPSALREVFVELPDVSWDDVGGLEATKARLRETVQWPLAYPEAF 485

Query: 802 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
           +R+   P TG+L++GPPG  KTL+A+AVA+EA  NF+++KGPEL  K+VGESE+ VR +F
Sbjct: 486 ERVRLSPATGVLLYGPPGTGKTLLAKAVANEADSNFISIKGPELLDKYVGESERGVREIF 545

Query: 862 AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
           AKAR NAP+++FFDE+D LAA RG  + G    +RV+SQLL ELDGL +  +V VIA TN
Sbjct: 546 AKARENAPTVVFFDELDALAAERGDGTGGSKAGERVVSQLLTELDGLEELEDVVVIATTN 605

Query: 922 RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
           RPD ID ALLR GR DR ++V  P+E  R EIF +H R  P + DV++ ELA  +EG  G
Sbjct: 606 RPDLIDDALLRSGRLDRHVHVDAPDEPARREIFAVHTRGKPLAEDVDLDELAARTEGYVG 665

Query: 982 ADISLICREAAISAI 996
           ADI  +CREAA +A+
Sbjct: 666 ADIEAVCREAATAAV 680



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/267 (36%), Positives = 148/267 (55%), Gaps = 19/267 (7%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + ++DVGG     TQ+ E  E P +H + F  +G  PP G+L++GP G  KTL+ RA+A+
Sbjct: 185  IGYDDVGGLDSEVTQIREMTELPLEHPDLFDVLGIDPPRGVLLYGPSGTGKTLLGRAIAA 244

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E       +   EL +   GE+E  +R +F +A  NAP+I+F DE+D +A  R +     
Sbjct: 245  ETDGYVRTLSASELLASPAGETEDRLREVFEEAAENAPAIVFIDELDAIAPNRER----A 300

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                R  ++L+  LDGL     V VI  TNR   +DPAL RPGRFDR + +G P+   RE
Sbjct: 301  EPDRRGATRLVSLLDGLADGERVVVIGTTNRLADVDPALRRPGRFDREIEIGVPDRAGRE 360

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE-----NLDAS--- 1003
            E+F IH R +  + DV++   A  + G  G DI  + RE+A++A+       +LD+S   
Sbjct: 361  EVFEIHTRGVALAEDVDLGAYAESTHGFVGGDIENLIRESAMAALRRLRPDIDLDSSALD 420

Query: 1004 -------RITMQHLKTAIRHVQPSEIH 1023
                   RIT   +++A+R V+PS + 
Sbjct: 421  PAVFDSLRITDADVRSALRSVEPSALR 447



 Score =  159 bits (402), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 135/238 (56%), Gaps = 18/238 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL    A L++ +    +       + L P  GVLL+GPPGTGKT LA+  A+++  N
Sbjct: 461 VGGLEATKARLRETVQWPLAYPEAFERVRLSPATGVLLYGPPGTGKTLLAKAVANEADSN 520

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD--GGEELSQR 529
             ++ GPE++ +  GESE+ + E+F  A ++AP VVF DELDA+A  R D  GG +  +R
Sbjct: 521 FISIKGPELLDKYVGESERGVREIFAKARENAPTVVFFDELDALAAERGDGTGGSKAGER 580

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+VIA TNRPD I+ AL R GRLDR + +D             
Sbjct: 581 VVSQLLTELDGLEELEDVVVIATTNRPDLIDDALLRSGRLDRHVHVD------------- 627

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
             P    R EI      G   +  D +++ L+  T G+VGAD+ A+C EAA   +R Y
Sbjct: 628 -APDEPARREIFAVHTRGKPLA-EDVDLDELAARTEGYVGADIEAVCREAATAAVRGY 683



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/235 (39%), Positives = 135/235 (57%), Gaps = 18/235 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++  +          LG+ P +GVLL+GP GTGKT L R  A ++   
Sbjct: 190 VGGLDSEVTQIREMTELPLEHPDLFDVLGIDPPRGVLLYGPSGTGKTLLGRAIAAETDGY 249

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           + T++  E+++   GE+E  L EVF+ A+++APA+VFIDELDAIAP R+    E  +R  
Sbjct: 250 VRTLSASELLASPAGETEDRLREVFEEAAENAPAIVFIDELDAIAPNRERA--EPDRRGA 307

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
             L++L+DG+   + V+VI  TNR   ++PALRRPGR DREIEI               V
Sbjct: 308 TRLVSLLDGLADGERVVVIGTTNRLADVDPALRRPGRFDREIEI--------------GV 353

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P  A R E+      G+  +  D ++   + +THGFVG D+  L  E+A+  LRR
Sbjct: 354 PDRAGREEVFEIHTRGVALA-EDVDLGAYAESTHGFVGGDIENLIRESAMAALRR 407


>gi|448368940|ref|ZP_21555707.1| ATPase AAA [Natrialba aegyptia DSM 13077]
 gi|445651483|gb|ELZ04391.1| ATPase AAA [Natrialba aegyptia DSM 13077]
          Length = 754

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 141/302 (46%), Positives = 200/302 (66%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG    K +L E ++WP  + + F+++  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWNDVGGLENTKERLRETIQWPLDYPQVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESE+ VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESERGVREIFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  RE IF +H R  P +  V +  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEAARERIFEVHTRDKPLADAVELDWLAEETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            I++++   RI+ +H + A+  VQPS        Y+++  +F
Sbjct: 678  REASMAASREFINSVEPEDIDDSVGNVRISKEHFEHALDEVQPSVTPETRERYEDIEQQF 737

Query: 1033 QR 1034
            Q+
Sbjct: 738  QQ 739



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 115/267 (43%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  IPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F  A  N+P+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFQTISGPEIMSKYYGESEEQLREVFEDAEENSPAIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEIGVPDKD 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EE 998
             R+EI ++H R +P   ++++   A  + G  GADI  + RE+A++A+          E+
Sbjct: 363  GRKEILQVHTRGMPLEDEIDLDRYAENTHGFVGADIESLTRESAMNALRRIRPDLDLEEQ 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T    K A++ +QPS
Sbjct: 423  EIDAEVLETLQVTEGDFKEALKGIQPS 449



 Score =  196 bits (498), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/237 (45%), Positives = 149/237 (62%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A +++PA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FQTISGPEIMSKYYGESEEQLREVFEDAEENSPAIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM    L+ E++    A  THGFVGAD+ +L  E+A+  LRR
Sbjct: 359 PDKDGRKEILQVHTRGMP---LEDEIDLDRYAENTHGFVGADIESLTRESAMNALRR 412



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 144/257 (56%), Gaps = 20/257 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            + ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLENTKERLRETIQWPLDYPQVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + E+F+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESERGVREIFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP  A R  I    +   +  L D+ E+++L+  T G+VGAD+ A+C EA++   R 
Sbjct: 632 --PVPDEAARERIFE--VHTRDKPLADAVELDWLAEETEGYVGADIEAVCREASMAASRE 687

Query: 647 YSKIQTSSDVLHSTGTL 663
           +       D+  S G +
Sbjct: 688 FINSVEPEDIDDSVGNV 704


>gi|448322425|ref|ZP_21511895.1| hypothetical protein C491_15682 [Natronococcus amylolyticus DSM
            10524]
 gi|445601183|gb|ELY55172.1| hypothetical protein C491_15682 [Natronococcus amylolyticus DSM
            10524]
          Length = 739

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 136/262 (51%), Positives = 190/262 (72%), Gaps = 1/262 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            A++++  D E A  ++ PSAMREV +EVP   WEDVGG  EV   L E V+WP ++ +AF
Sbjct: 421  AVEIDESDLEAAVREIEPSAMREVFVEVPDATWEDVGGLEEVTRTLRETVQWPLEYADAF 480

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             R+  RP TG+L++GPPG  KTL+ARAVA+EA  NF+++KGPEL  K+VGESE+ +R++F
Sbjct: 481  DRVSLRPATGVLLYGPPGTGKTLLARAVANEAQSNFISIKGPELVDKYVGESERGIRNVF 540

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            +KAR NAP+++ FDEID +A  R   S+  +V +RV+SQLL ELDGL +  +V V+A TN
Sbjct: 541  SKARENAPTVLVFDEIDAIAGTRSDSSE-TAVGERVVSQLLTELDGLEELEDVVVLATTN 599

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD+ID ALLR GRF++ + VG P+E  R EIF IHLR  P ++DV++  LA  +EG  G
Sbjct: 600  RPDRIDDALLRAGRFEQHVRVGEPDEAARREIFEIHLRDRPLAADVDLGTLAERTEGAVG 659

Query: 982  ADISLICREAAISAIEENLDAS 1003
            +DI  ICR AA++A+ + ++ S
Sbjct: 660  SDIEGICRTAAMNAVRDYVETS 681



 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 119/322 (36%), Positives = 178/322 (55%), Gaps = 31/322 (9%)

Query: 727  VSDSSGGMFMSEKGCALKLELVDFEKARMKV-----------RPSAMREVILEV--PKVK 773
            VSD       +E   ++ +E+VD + A   V            P+A+ E   +   P V 
Sbjct: 121  VSDGETVRIDAEASRSVPIEVVDVDPADPAVVEEWTSIVIAPEPAAVDEEDCDATDPVVT 180

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            ++DVGG  +   Q+ E VE P ++   F R+G  PP G+L++GPPG  KTL+ARA+A+E 
Sbjct: 181  YDDVGGLADELEQVREVVELPMRYPGVFDRLGIDPPKGVLLYGPPGTGKTLIARAMANEV 240

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            G +F  ++GPE+ SK+ GESE+ +R +F +A  NAP+I+F DEID +A    K  D   V
Sbjct: 241  GAHFQTLRGPEIVSKYHGESEERLREVFEEAEENAPAIVFIDEIDAIAP---KREDVGDV 297

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              R+++QLL  LDG   R  V V+  TNR D +DPAL RPGRFDR + +G P+  +R EI
Sbjct: 298  ERRIVAQLLSLLDGGDDRGQVVVVGTTNRVDSVDPALRRPGRFDREVEIGVPDADERAEI 357

Query: 954  FRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------------E 998
              IH   +  +  +++   A  + G  GAD+  + RE+A+ A+                +
Sbjct: 358  LGIHAADVSINDSIDLERYAERTHGFVGADLENLIRESAMCALRRLRADSSSDSIELPTD 417

Query: 999  NLDASRITMQHLKTAIRHVQPS 1020
             LDA  I    L+ A+R ++PS
Sbjct: 418  RLDAVEIDESDLEAAVREIEPS 439



 Score =  199 bits (505), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/249 (44%), Positives = 158/249 (63%), Gaps = 22/249 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL+ E   +++++ +          LG+ P KGVLL+GPPGTGKT +AR  A++ G +
Sbjct: 184 VGGLADELEQVREVVELPMRYPGVFDRLGIDPPKGVLLYGPPGTGKTLIARAMANEVGAH 243

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T+ GPE+VS+ +GESE+ L EVF+ A ++APA+VFIDE+DAIAP R+D G+ + +R+V
Sbjct: 244 FQTLRGPEIVSKYHGESEERLREVFEEAEENAPAIVFIDEIDAIAPKREDVGD-VERRIV 302

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+L+DG      V+V+  TNR DS++PALRRPGR DRE+EI               V
Sbjct: 303 AQLLSLLDGGDDRGQVVVVGTTNRVDSVDPALRRPGRFDREVEI--------------GV 348

Query: 592 PSPAQRLEIL--HALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
           P   +R EIL  HA    +  S+   ++E  +  THGFVGADL  L  E+A+  LRR  +
Sbjct: 349 PDADERAEILGIHAADVSINDSI---DLERYAERTHGFVGADLENLIRESAMCALRRL-R 404

Query: 650 IQTSSDVLH 658
             +SSD + 
Sbjct: 405 ADSSSDSIE 413



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 134/245 (54%), Gaps = 19/245 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    L++ +            + LRP  GVLL+GPPGTGKT LAR  A+++  N
Sbjct: 456 VGGLEEVTRTLRETVQWPLEYADAFDRVSLRPATGVLLYGPPGTGKTLLARAVANEAQSN 515

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE-LSQRM 530
             ++ GPE+V +  GESE+ +  VF  A ++AP V+  DE+DAIA  R D  E  + +R+
Sbjct: 516 FISIKGPELVDKYVGESERGIRNVFSKARENAPTVLVFDEIDAIAGTRSDSSETAVGERV 575

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ LL  +DG+   + V+V+A TNRPD I+ AL R GR ++ + +               
Sbjct: 576 VSQLLTELDGLEELEDVVVLATTNRPDRIDDALLRAGRFEQHVRV--------------G 621

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
            P  A R EI    L     +  D ++  L+  T G VG+D+  +C  AA+  +R Y  +
Sbjct: 622 EPDEAARREIFEIHLRDRPLA-ADVDLGTLAERTEGAVGSDIEGICRTAAMNAVRDY--V 678

Query: 651 QTSSD 655
           +TS++
Sbjct: 679 ETSAN 683


>gi|448114131|ref|XP_004202500.1| Piso0_001338 [Millerozyma farinosa CBS 7064]
 gi|359383368|emb|CCE79284.1| Piso0_001338 [Millerozyma farinosa CBS 7064]
          Length = 797

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 140/294 (47%), Positives = 206/294 (70%), Gaps = 17/294 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D ++A  +VRPSAMREV+LE+PKV W D+GGQ ++K +L+E V+ P +  E F ++G + 
Sbjct: 507  DMDEALTEVRPSAMREVLLEMPKVFWSDIGGQADLKRKLVEVVQLPLEAAETFHKLGVQA 566

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+ +K+VGESE+ +R +F KAR  A
Sbjct: 567  PKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEILNKYVGESERTIREIFRKARTAA 626

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSIIFFDEID +++ R  ES   S +  V++ LL E+DG+ +   V ++AATNRP +ID 
Sbjct: 627  PSIIFFDEIDAISSDR--ESASTSAAQNVLTSLLNEIDGVEELKGVIILAATNRPTEIDS 684

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS------DVNIRELACLSEGCTGA 982
            ALLRPGR DR +YVGPP+   R +I R       C+S      +++  ELA  +EGC+GA
Sbjct: 685  ALLRPGRLDRHIYVGPPDYDARLDILRKK-----CTSFDLKEEELSFEELARWTEGCSGA 739

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAKF 1032
            ++SL+C+EA ++AI E+  A  +  +H + A+    R +    ++ YKE +++F
Sbjct: 740  EVSLLCQEAGLAAIMEDKTAQCVQKKHFEFALKGISRGITSEMLNYYKEFASRF 793



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 147/242 (60%), Gaps = 19/242 (7%)

Query: 410 ISKLGGLSKEYAILK-DIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
            S LGGL+K+   L+  I +  +     S  G+ P +G+LL GPPGTGKT L R  A++ 
Sbjct: 265 FSDLGGLAKQVETLRLAIDLPLNNPKLFSEFGISPPRGILLQGPPGTGKTMLLRCIAYEV 324

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELS 527
             ++ TV+GP VVS+  GE+E A+ ++F  A +  P+++ +DE+D++AP+R  D   E  
Sbjct: 325 DAHILTVSGPSVVSKYMGEAENAIRDIFLEAKRFEPSIIILDEIDSLAPSRNSDDSGEAE 384

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            R++AT+L ++D +  ++ VL+I ATNRP+S++ +LRRPGR D+EIEI            
Sbjct: 385 SRVIATILTMIDSLNASNRVLIIGATNRPNSVDSSLRRPGRFDQEIEI------------ 432

Query: 588 PAAVPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
              +P    R ++L      +   +++L + E++ ++  THG+VGADL +LC EA +  +
Sbjct: 433 --GIPDVEARFDVLQKQFRKINKAKYNLEEDEIKLIASKTHGYVGADLISLCREAIIKAV 490

Query: 645 RR 646
            R
Sbjct: 491 TR 492



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 150/271 (55%), Gaps = 18/271 (6%)

Query: 767  LEVPKVKWE---------DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
            +++P +K+          D+GG  +    L  A++ P  + + F   G  PP GIL+ GP
Sbjct: 249  IDLPYIKYNRLPRNPSFSDLGGLAKQVETLRLAIDLPLNNPKLFSEFGISPPRGILLQGP 308

Query: 818  PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
            PG  KT++ R +A E   + L V GP + SK++GE+E A+R +F +A+   PSII  DEI
Sbjct: 309  PGTGKTMLLRCIAYEVDAHILTVSGPSVVSKYMGEAENAIRDIFLEAKRFEPSIIILDEI 368

Query: 878  DGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
            D LA  R  +  G + S RV++ +L  +D L+    V +I ATNRP+ +D +L RPGRFD
Sbjct: 369  DSLAPSRNSDDSGEAES-RVIATILTMIDSLNASNRVLIIGATNRPNSVDSSLRRPGRFD 427

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSS----DVNIRELACLSEGCTGADISLICREAAI 993
            + + +G P+   R ++ +   RKI  +     +  I+ +A  + G  GAD+  +CREA I
Sbjct: 428  QEIEIGIPDVEARFDVLQKQFRKINKAKYNLEEDEIKLIASKTHGYVGADLISLCREAII 487

Query: 994  SAIEENL----DASRITMQHLKTAIRHVQPS 1020
             A+   L    + + +T   +  A+  V+PS
Sbjct: 488  KAVTRGLSNKSNETLMTYSDMDEALTEVRPS 518



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 120/210 (57%), Gaps = 14/210 (6%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T   LG++  KGVLL+GPPG  KT  A+  A +SG+N   V GPE++++  GESE+ + E
Sbjct: 558 TFHKLGVQAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEILNKYVGESERTIRE 617

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F  A  +AP+++F DE+DAI+  R+      +Q ++ +LLN +DGV    GV+++AATN
Sbjct: 618 IFRKARTAAPSIIFFDEIDAISSDRESASTSAAQNVLTSLLNEIDGVEELKGVIILAATN 677

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RP  I+ AL RPGRLDR I +                P    RL+IL    +  +    +
Sbjct: 678 RPTEIDSALLRPGRLDRHIYV--------------GPPDYDARLDILRKKCTSFDLKEEE 723

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCL 644
              E L+  T G  GA+++ LC EA L  +
Sbjct: 724 LSFEELARWTEGCSGAEVSLLCQEAGLAAI 753


>gi|110668618|ref|YP_658429.1| AAA-type ATPase (transitional ATPase homolog) [Haloquadratum walsbyi
            DSM 16790]
 gi|385804094|ref|YP_005840494.1| AAA ATPase [Haloquadratum walsbyi C23]
 gi|109626365|emb|CAJ52824.1| AAA-type ATPase (CDC48 subfamily) [Haloquadratum walsbyi DSM 16790]
 gi|339729586|emb|CCC40856.1| AAA-type ATPase (CDC48 subfamily) [Haloquadratum walsbyi C23]
          Length = 753

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/313 (46%), Positives = 200/313 (63%), Gaps = 13/313 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L +   DF+ A   + PSA+REV +EVP V W DVGG  E K +L E ++WP  + + F
Sbjct: 429  SLSVTETDFKDAIRGIEPSALREVFVEVPDVTWGDVGGLTETKERLRETIQWPLDYPDVF 488

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + +  +   G+LM+GPPG  KT++A+AVA+E+  NF++VKGPEL  K+VGESEK VR +F
Sbjct: 489  EEMDIQSAKGVLMYGPPGTGKTMLAKAVANESESNFISVKGPELLDKYVGESEKGVRDIF 548

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +A  RG  S    VS+RV+SQLL ELDGL    +V +IA TN
Sbjct: 549  KKARENAPTVVFFDEIDSIATERGGTSGDSGVSERVVSQLLTELDGLESLEDVVIIATTN 608

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+ET RE IF +H  + P +  V++  LA  +EG  G
Sbjct: 609  RPDLIDAALLRPGRLDRHVHVPVPSETAREAIFEVHTEEKPLADSVSLSRLASRTEGYVG 668

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPSEIHSYKELS 1029
            ADI  +CREA+++A            ++E++   R+TM H + A+  V PS     +E  
Sbjct: 669  ADIEAVCREASMAASREFINNVSPEEVKESVGNIRVTMGHFEDALDEVGPSVTQETREQY 728

Query: 1030 AKF-QRLVHSNAE 1041
             +  QR   SN E
Sbjct: 729  EQIEQRFETSNVE 741



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/267 (44%), Positives = 169/267 (63%), Gaps = 19/267 (7%)

Query: 770  PKVKWEDVGG-QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            P V +ED+GG +RE++ Q+ E +E P +H E F+R+G  PP G+L+ GPPG  KTL+A+A
Sbjct: 184  PAVTYEDIGGLERELE-QVREMIELPMRHPELFQRLGIEPPKGVLLHGPPGTGKTLIAKA 242

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A   APSI+F DEID +A  RG+  
Sbjct: 243  VANEIDASFHTISGPEIMSKYYGESEEQLREIFEEAEEEAPSIVFVDEIDSIAPKRGEA- 301

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  V VI ATNR D +DPAL R GRFDR + VG P+  
Sbjct: 302  -GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDALDPALRRGGRFDREIEVGVPDRE 360

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDAS 1003
             R+EI ++H R +P S  VN+ E A  + G  GADI  + +EAA++A+     E +L+A 
Sbjct: 361  GRKEILQVHTRNMPLSDSVNLDEYADNTHGFVGADIESLAKEAAMNALRRIRPELDLEAD 420

Query: 1004 R----------ITMQHLKTAIRHVQPS 1020
                       +T    K AIR ++PS
Sbjct: 421  EVDADVLESLSVTETDFKDAIRGIEPS 447



 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/251 (43%), Positives = 154/251 (61%), Gaps = 21/251 (8%)

Query: 398 EFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           E  N  A   +DI   GGL +E   ++++I +          LG+ P KGVLLHGPPGTG
Sbjct: 179 ESSNTPAVTYEDI---GGLERELEQVREMIELPMRHPELFQRLGIEPPKGVLLHGPPGTG 235

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT +A+  A++   +  T++GPE++S+ YGESE+ L E+F+ A + AP++VF+DE+D+IA
Sbjct: 236 KTLIAKAVANEIDASFHTISGPEIMSKYYGESEEQLREIFEEAEEEAPSIVFVDEIDSIA 295

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R + G ++ +R+VA LL+LMDG+     V+VI ATNR D+++PALRR GR DREIE+ 
Sbjct: 296 PKRGEAGGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDALDPALRRGGRFDREIEV- 354

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAAL 635
                         VP    R EIL      M   L DS  ++  +  THGFVGAD+ +L
Sbjct: 355 -------------GVPDREGRKEILQVHTRNM--PLSDSVNLDEYADNTHGFVGADIESL 399

Query: 636 CNEAALVCLRR 646
             EAA+  LRR
Sbjct: 400 AKEAAMNALRR 410



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 154/281 (54%), Gaps = 22/281 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL++    L++ I            + ++  KGVL++GPPGTGKT LA+  A++S  N
Sbjct: 464 VGGLTETKERLRETIQWPLDYPDVFEEMDIQSAKGVLMYGPPGTGKTMLAKAVANESESN 523

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             +V GPE++ +  GESE+ + ++F  A ++AP VVF DE+D+IA  R    G   +S+R
Sbjct: 524 FISVKGPELLDKYVGESEKGVRDIFKKARENAPTVVFFDEIDSIATERGGTSGDSGVSER 583

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V++IA TNRPD I+ AL RPGRLDR + +              
Sbjct: 584 VVSQLLTELDGLESLEDVVIIATTNRPDLIDAALLRPGRLDRHVHV-------------- 629

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            VPS   R  I    +   E  L DS  +  L+  T G+VGAD+ A+C EA++   R + 
Sbjct: 630 PVPSETAREAIFE--VHTEEKPLADSVSLSRLASRTEGYVGADIEAVCREASMAASREFI 687

Query: 649 KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 689
              +  +V  S G +    GH +  L   +   ++T+ +R+
Sbjct: 688 NNVSPEEVKESVGNIRVTMGHFEDAL--DEVGPSVTQETRE 726


>gi|300122194|emb|CBK22768.2| unnamed protein product [Blastocystis hominis]
          Length = 352

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 135/280 (48%), Positives = 195/280 (69%), Gaps = 7/280 (2%)

Query: 756  KVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMF 815
            ++RPSA+REV +  P V W  +GG   VK +L E +EWP +    F R    PP G+L++
Sbjct: 72   RIRPSALREVSISSPNVHWRQIGGLEPVKARLRELLEWPLRFTAQFARFHVSPPKGVLLY 131

Query: 816  GPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFD 875
            GPPGCSKTL+A+AVA+EA +NF++VKGPEL+SK+VGESE+AV ++F KAR ++P +IFFD
Sbjct: 132  GPPGCSKTLLAKAVATEANMNFISVKGPELYSKYVGESEQAVAAVFRKARLSSPCVIFFD 191

Query: 876  EIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGR 935
            EID   A+  + S G  V++RV+SQ L ELDG+H    V VIAATNRPD +DPALLRPGR
Sbjct: 192  EIDAF-AVDSRGSSG--VTERVVSQFLTELDGIHALKRVLVIAATNRPDLLDPALLRPGR 248

Query: 936  FDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISA 995
             D  +++G P+   R +I  +HL K+PC  DV+ +E+A  +EG +GA+++ +C +A ++ 
Sbjct: 249  LDTHIFLGLPDVEARRKILEVHLEKVPCDDDVDAQEIAERTEGYSGAELAAVCSDACLTT 308

Query: 996  IEENLDASRITMQHLKTAIRHVQ----PSEIHSYKELSAK 1031
            + EN DA ++  +HL+ A+ HV+    P  +  Y E + K
Sbjct: 309  LSENKDAEKVDQKHLRLALEHVKARTNPELLKLYIEFNEK 348



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 142/266 (53%), Gaps = 27/266 (10%)

Query: 382 AVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLG 440
           AV   +R   L    I   NV         ++GGL    A L++++       +  +   
Sbjct: 68  AVLPRIRPSALREVSISSPNVH------WRQIGGLEPVKARLRELLEWPLRFTAQFARFH 121

Query: 441 LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSAS 500
           + P KGVLL+GPPG  KT LA+  A ++ +N  +V GPE+ S+  GESEQA+  VF  A 
Sbjct: 122 VSPPKGVLLYGPPGCSKTLLAKAVATEANMNFISVKGPELYSKYVGESEQAVAAVFRKAR 181

Query: 501 QSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
            S+P V+F DE+DA A   + G   +++R+V+  L  +DG+     VLVIAATNRPD ++
Sbjct: 182 LSSPCVIFFDEIDAFAVDSR-GSSGVTERVVSQFLTELDGIHALKRVLVIAATNRPDLLD 240

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
           PAL RPGRLD  I     FL          +P    R +IL   L   E    D +V+  
Sbjct: 241 PALLRPGRLDTHI-----FL---------GLPDVEARRKILEVHL---EKVPCDDDVDAQ 283

Query: 621 SMA--THGFVGADLAALCNEAALVCL 644
            +A  T G+ GA+LAA+C++A L  L
Sbjct: 284 EIAERTEGYSGAELAAVCSDACLTTL 309


>gi|448337156|ref|ZP_21526238.1| AAA family ATPase [Natrinema pallidum DSM 3751]
 gi|445626502|gb|ELY79845.1| AAA family ATPase [Natrinema pallidum DSM 3751]
          Length = 753

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 139/284 (48%), Positives = 191/284 (67%), Gaps = 12/284 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG  + K QL E ++WP  + E F+++  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGDTKEQLRETIQWPLDYPEVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R+ IF +H R  P +  V++  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEDARKAIFDVHTRNKPLAESVDLEWLAAETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            REA+++A            +++ +   RI  QH + A+  V PS
Sbjct: 678  REASMAASREFINSVDPEEMDDTIGNVRIGKQHFEHALEEVNPS 721



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 170/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVAYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   NF  + GPE+ SK+ GESE+ +R +F +A  NAPSIIF DE+D +AA R  E 
Sbjct: 245  VANEIDANFETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKE 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R+EI ++H R +P   ++++ + A  + G  GAD+  + RE+A++A+            
Sbjct: 363  GRKEILQVHTRGMPLDEEIDLDQYAESTHGFVGADLESLARESAMNALRRIRPELDLESE 422

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                + LD+  ++ +  K A++ +QPS
Sbjct: 423  EIDADVLDSLEVSERDFKEALKGIQPS 449



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/237 (46%), Positives = 150/237 (63%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAN 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++AP+++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM    LD E++    A  THGFVGADL +L  E+A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGMP---LDEEIDLDQYAESTHGFVGADLESLARESAMNALRR 412



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 138/242 (57%), Gaps = 22/242 (9%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            + ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLGDTKEQLRETIQWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + EVF+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEI--LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
              VP    R  I  +H     +  S+   ++E+L+  T G+VGAD+ A+C EA++   R
Sbjct: 632 --PVPDEDARKAIFDVHTRNKPLAESV---DLEWLAAETEGYVGADIEAVCREASMAASR 686

Query: 646 RY 647
            +
Sbjct: 687 EF 688


>gi|448578365|ref|ZP_21643800.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            larsenii JCM 13917]
 gi|445726906|gb|ELZ78522.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            larsenii JCM 13917]
          Length = 752

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 148/323 (45%), Positives = 208/323 (64%), Gaps = 17/323 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   DF++A     PSA+REV +EVP V WEDVGG  + K +L E ++WP ++ E F
Sbjct: 430  SLRVTEDDFKEALKSTEPSALREVFVEVPDVTWEDVGGLGDTKERLRETIQWPLEYPEVF 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 490  EKMDMAAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +AA RG +S    V++RV+SQLL ELDGL    +V VIA TN
Sbjct: 550  KKARENAPTVVFFDEIDSIAAERGSDSTSSGVTERVVSQLLTELDGLESLEDVVVIATTN 609

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  I  +H    P + DV++ ++A  ++G  G
Sbjct: 610  RPDLIDAALLRPGRLDRHVHVPVPDEDARRAILDVHTEHKPLADDVDLDKIASRTDGYVG 669

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS---EI-HSY 1025
            ADI  +CREA+++A            I+E++   R+TM H   A+  V PS   E+   Y
Sbjct: 670  ADIEALCREASMNASREFITSVEKDEIDESIGNVRVTMDHFVDALDEVGPSVTDEVRRRY 729

Query: 1026 KELSAKF-QRLVHSNAEADESGY 1047
             E+  +F Q  V    EA  + Y
Sbjct: 730  DEIEERFHQSEVQHEDEAGRTFY 752



 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 163/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  RG+   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRGEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDTALRRGGRFDREIEIGVPDREG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + +V++   A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEILQVHTRNMPLTDEVDLDSYADNTHGFVGADLESLAKESAMHALRRIRPELDLEAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      R+T    K A++  +PS
Sbjct: 423  IDAEVLESLRVTEDDFKEALKSTEPS 448



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/270 (43%), Positives = 159/270 (58%), Gaps = 34/270 (12%)

Query: 394 NAQIEFQNVQATVEQ--DIS------------KLGGLSKEYAILKDII-ISSSVKSTLSS 438
           N   EFQ  Q   EQ  D S             +GGL KE   ++++I +          
Sbjct: 159 NDNTEFQVSQKPAEQIADTSSGTSDGPSVTYEDIGGLDKELEQVREMIELPMRHPELFKR 218

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P KGVLLHGPPGTGKT +A+  A++   +  T++GPE++S+ YGESE+ L E+F+ 
Sbjct: 219 LGIEPPKGVLLHGPPGTGKTLIAKAVANEIDASFHTISGPEIMSKYYGESEEQLREIFEE 278

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A++++PA+VFIDE+D+IAP R + G ++ +R+VA LL+LMDG+     V+VI ATNR D+
Sbjct: 279 ATENSPAIVFIDEIDSIAPKRGEAGGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDA 338

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           I+ ALRR GR DREIEI               VP    R EIL      M    L  EV+
Sbjct: 339 IDTALRRGGRFDREIEI--------------GVPDREGRKEILQVHTRNMP---LTDEVD 381

Query: 619 YLSMA--THGFVGADLAALCNEAALVCLRR 646
             S A  THGFVGADL +L  E+A+  LRR
Sbjct: 382 LDSYADNTHGFVGADLESLAKESAMHALRR 411



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 146/295 (49%), Gaps = 48/295 (16%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 488 VFEKMDMAAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 547

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP VVF DE+D+IA  R        +++R+V+ LL  +DG+   + V+VIA 
Sbjct: 548 VFKKARENAPTVVFFDEIDSIAAERGSDSTSSGVTERVVSQLLTELDGLESLEDVVVIAT 607

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  IL       EH  
Sbjct: 608 TNRPDLIDAALLRPGRLDRHVHV--------------PVPDEDARRAILDV---HTEHKP 650

Query: 613 L--DSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHS 670
           L  D +++ ++  T G+VGAD+ ALC EA++   R +       ++  S G +       
Sbjct: 651 LADDVDLDKIASRTDGYVGADIEALCREASMNASREFITSVEKDEIDESIGNV------- 703

Query: 671 DTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHN 725
                     R   +   D LD   P  +D           +R    EI + FH 
Sbjct: 704 ----------RVTMDHFVDALDEVGPSVTD----------EVRRRYDEIEERFHQ 738


>gi|444314581|ref|XP_004177948.1| hypothetical protein TBLA_0A06380 [Tetrapisispora blattae CBS 6284]
 gi|387510987|emb|CCH58429.1| hypothetical protein TBLA_0A06380 [Tetrapisispora blattae CBS 6284]
          Length = 808

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/306 (45%), Positives = 208/306 (67%), Gaps = 8/306 (2%)

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
            GM   +    LK+EL D E A + VRPSAMRE+ LE+PKV W D+GGQ E+K ++ E ++
Sbjct: 499  GMIDPKGSNDLKVELHDIENAMVDVRPSAMREIFLEMPKVYWSDIGGQEELKQKMKEMIQ 558

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P +  E F ++G   P G+L++GPPGCSKTL A+A+A+E+G+NF AVKGPE+F+K+VGE
Sbjct: 559  LPLEASETFNKLGVTAPKGVLLYGPPGCSKTLTAKALATESGINFFAVKGPEIFNKYVGE 618

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+A+R +F KARA +PSIIFFDEID +++ R +   G  VS+ V++ LL E+DG+ +  
Sbjct: 619  SERAIREIFRKARAASPSIIFFDEIDAISSSR-EGGSGSDVSNHVLTSLLNEIDGVEELN 677

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFR---IHLRKIPCSSDVNI 969
             V ++AATNRPD+IDPALLRPGR DR LYVGPP+   R +I +   I       + +  +
Sbjct: 678  GVVIVAATNRPDEIDPALLRPGRLDRHLYVGPPDFNARLQIIKKCTIKFGSEIQNDEPFL 737

Query: 970  RELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSY 1025
            REL+  + GC+GA++ L+C+EA +SAI  +    ++   H + A+    R +    +  Y
Sbjct: 738  RELSAKTGGCSGAEVVLLCQEAGLSAIMADYQVDKVGKHHFQNALEGLSRGITEDMLGYY 797

Query: 1026 KELSAK 1031
            ++ +++
Sbjct: 798  QQFASR 803



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 107/239 (44%), Positives = 152/239 (63%), Gaps = 19/239 (7%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL+KE  ILK+ I     K  L S  G+ P +G+LLHGPPGTGKT L R  A++S  +
Sbjct: 274 VGGLNKEIEILKNAIELPLHKPKLFSRFGVSPPRGILLHGPPGTGKTMLLRCVANNSNAH 333

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
           + T+NGP +VS+  GE+E +L + F+ A +  P+++FIDE+D+IAP R  D   E+  R+
Sbjct: 334 VLTINGPSIVSKYLGETESSLRDFFNEAKKYQPSIIFIDEIDSIAPNRSSDDSGEVESRV 393

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           VATLL LMDG+  +  V+V+ ATNRP+SI+ ALRRPGR D+EIEI               
Sbjct: 394 VATLLTLMDGMGNSGRVVVVGATNRPNSIDSALRRPGRFDQEIEI--------------G 439

Query: 591 VPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +P    R +IL      M    HSL D +++ ++  THG+VGADL+ALC E+ +  ++R
Sbjct: 440 IPDVDGRKDILLKQFHKMSSERHSLSDEDIQSIASKTHGYVGADLSALCRESVMKAIQR 498



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 161/301 (53%), Gaps = 26/301 (8%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +    L  A+E P    + F R G  PP GIL+ GPPG  KT++ R VA+ +
Sbjct: 271  YNLVGGLNKEIEILKNAIELPLHKPKLFSRFGVSPPRGILLHGPPGTGKTMLLRCVANNS 330

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L + GP + SK++GE+E ++R  F +A+   PSIIF DEID +A  R  +  G  V
Sbjct: 331  NAHVLTINGPSIVSKYLGETESSLRDFFNEAKKYQPSIIFIDEIDSIAPNRSSDDSG-EV 389

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++ LL  +DG+     V V+ ATNRP+ ID AL RPGRFD+ + +G P+   R++I
Sbjct: 390  ESRVVATLLTLMDGMGNSGRVVVVGATNRPNSIDSALRRPGRFDQEIEIGIPDVDGRKDI 449

Query: 954  FRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAISAIEENL------DAS 1003
                  K+       SD +I+ +A  + G  GAD+S +CRE+ + AI+  +      +  
Sbjct: 450  LLKQFHKMSSERHSLSDEDIQSIASKTHGYVGADLSALCRESVMKAIQRGMIDPKGSNDL 509

Query: 1004 RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESGYQ 1048
            ++ +  ++ A+  V+P               S+I   +EL  K + ++    EA E+  +
Sbjct: 510  KVELHDIENAMVDVRPSAMREIFLEMPKVYWSDIGGQEELKQKMKEMIQLPLEASETFNK 569

Query: 1049 L 1049
            L
Sbjct: 570  L 570



 Score =  149 bits (376), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/235 (37%), Positives = 133/235 (56%), Gaps = 18/235 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG  +    +K++I +      T + LG+   KGVLL+GPPG  KT  A+  A +SG
Sbjct: 541 SDIGGQEELKQKMKEMIQLPLEASETFNKLGVTAPKGVLLYGPPGCSKTLTAKALATESG 600

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAI-APARKDGGEELSQ 528
           +N F V GPE+ ++  GESE+A+ E+F  A  ++P+++F DE+DAI +      G ++S 
Sbjct: 601 INFFAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAISSSREGGSGSDVSN 660

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            ++ +LLN +DGV   +GV+++AATNRPD I+PAL RPGRLDR + +             
Sbjct: 661 HVLTSLLNEIDGVEELNGVVIVAATNRPDEIDPALLRPGRLDRHLYV------------- 707

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSE--VEYLSMATHGFVGADLAALCNEAAL 641
              P    RL+I+          + + E  +  LS  T G  GA++  LC EA L
Sbjct: 708 -GPPDFNARLQIIKKCTIKFGSEIQNDEPFLRELSAKTGGCSGAEVVLLCQEAGL 761


>gi|435847167|ref|YP_007309417.1| AAA family ATPase, CDC48 subfamily [Natronococcus occultus SP4]
 gi|433673435|gb|AGB37627.1| AAA family ATPase, CDC48 subfamily [Natronococcus occultus SP4]
          Length = 753

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 141/301 (46%), Positives = 199/301 (66%), Gaps = 16/301 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D ++A   ++PSAMREV +EVP + WEDVGG  + K +L E ++WP  + E F+++  + 
Sbjct: 438  DVKEALKGIQPSAMREVFVEVPDITWEDVGGLGDTKERLRETIQWPLDYPEVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+E+  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANESQSNFISIKGPELLNKYVGESEKGVREVFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R +IF +H R  P +  V++  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEEGRRKIFEVHTRDKPLADAVDLDWLAGETEGYVGADIEAVC 677

Query: 989  REAAISAIEE------------NLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A  E             ++  RI+ +H + A+  VQPS        Y+E+  +F
Sbjct: 678  REASMAASREFINSVDPDDMPDTIENVRISKEHFERALEEVQPSVTPETRERYEEIEQEF 737

Query: 1033 Q 1033
            Q
Sbjct: 738  Q 738



 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 168/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP + +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNITYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F  A  NAP+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEDAEENAPAIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKG 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R+EI ++H R +P S DV++   A  + G  GAD+  + RE A++A+            
Sbjct: 363  GRKEILQVHTRGMPLSEDVDLEHYAENTHGFVGADLESLAREGAMNALRRIRPDLDLESD 422

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E L++  +T   +K A++ +QPS
Sbjct: 423  EIDAEILESLEVTEGDVKEALKGIQPS 449



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/235 (46%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEDAEENAPAIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S  D ++E+ +  THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKGGRKEILQVHTRGMPLS-EDVDLEHYAENTHGFVGADLESLAREGAMNALRR 412



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 152/270 (56%), Gaps = 25/270 (9%)

Query: 383 VSKSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLG 440
           V ++L+ G  P+A  E F  V     +D+   GGL      L++ I            + 
Sbjct: 439 VKEALK-GIQPSAMREVFVEVPDITWEDV---GGLGDTKERLRETIQWPLDYPEVFEQMD 494

Query: 441 LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSAS 500
           ++  KGVL++GPPGTGKT LA+  A++S  N  ++ GPE++++  GESE+ + EVF+ A 
Sbjct: 495 MQAAKGVLMYGPPGTGKTLLAKAVANESQSNFISIKGPELLNKYVGESEKGVREVFEKAR 554

Query: 501 QSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
            +AP V+F DE+D+IA  R  + G   + +R+V+ LL  +DG+   + V+VIA TNRPD 
Sbjct: 555 SNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDL 614

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EV 617
           I+ AL RPGRLDR + +               VP    R +I    +   +  L D+ ++
Sbjct: 615 IDSALLRPGRLDRHVHV--------------PVPDEEGRRKIFE--VHTRDKPLADAVDL 658

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRRY 647
           ++L+  T G+VGAD+ A+C EA++   R +
Sbjct: 659 DWLAGETEGYVGADIEAVCREASMAASREF 688


>gi|13541778|ref|NP_111466.1| ATPase of the AAA+ class involved in cell division [Thermoplasma
            volcanium GSS1]
 gi|14325192|dbj|BAB60117.1| cell cycle control protein 48 [Thermoplasma volcanium GSS1]
          Length = 745

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 133/285 (46%), Positives = 198/285 (69%), Gaps = 5/285 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A   + PS++REV++EVP V W+D+GG  +VK ++ E VE P    + FKR+G RP
Sbjct: 441  DFKNALKNIEPSSLREVMVEVPNVHWDDIGGLEDVKREVKETVELPLLKPDVFKRLGIRP 500

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G L++GPPG  KTL+A+AVA+E+  NF+++KGPE+ SKWVGESEKA+R +F KA+  A
Sbjct: 501  SKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVA 560

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+F DEID +A  RG  SD   V++R+++QLL  LDG+     V  I ATNRPD +DP
Sbjct: 561  PAIVFLDEIDSIAPRRGTTSDS-GVTERIVNQLLTSLDGIEVMNGVVAIGATNRPDIMDP 619

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFD+L+Y+ PP++  R  I ++H + +P + DV++  +A  +EG  GAD+  +C
Sbjct: 620  ALLRAGRFDKLIYIPPPDKDARLSILKVHTKNMPLAPDVDLDSIAQRTEGYVGADLENLC 679

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELS 1029
            REA ++A  EN DA++++ ++   A++ ++PS     I  YK +S
Sbjct: 680  REAGMNAYRENPDATQVSQKNFIDALKTIRPSIDEEVIKFYKSIS 724



 Score =  239 bits (610), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 126/316 (39%), Positives = 195/316 (61%), Gaps = 21/316 (6%)

Query: 727  VSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQ 786
            ++  +G +F   K    K+ +   E+ ++++R     EV+ EV +V +ED+GG  E   +
Sbjct: 142  LAGQTGLLFKVVKTMPGKVPVEIGEETKIEIREEPASEVLEEVSRVSYEDIGGLSEQLGK 201

Query: 787  LMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELF 846
            + E +E P KH E F+R+G  PP G++++GPPG  KTL+ARAVA+E+G NFL++ GPE+ 
Sbjct: 202  IREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIM 261

Query: 847  SKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELD 906
            SK+ G+SE+ +R +F+KA   APSIIF DEID +A  R +E  G  V  RV++QLL  +D
Sbjct: 262  SKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKR-EEVQG-EVERRVVAQLLTLMD 319

Query: 907  GLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD 966
            G+ +R +V VI ATNR D +DPAL RPGRFDR + +G P+   R+EI  IH R +P   D
Sbjct: 320  GMKERGHVIVIGATNRIDAVDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMD 379

Query: 967  VN-----IRELACLSEGCTGADISLICREAAISAIE--------------ENLDASRITM 1007
                   + E+A  + G  GAD++ + RE+A++A+               E L+   +T 
Sbjct: 380  EEQKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVTE 439

Query: 1008 QHLKTAIRHVQPSEIH 1023
            +  K A+++++PS + 
Sbjct: 440  EDFKNALKNIEPSSLR 455



 Score =  211 bits (538), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/240 (45%), Positives = 156/240 (65%), Gaps = 19/240 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS++   ++++I +          LG+ P KGV+L+GPPGTGKT +AR  A++SG N
Sbjct: 192 IGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGAN 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             ++NGPE++S+ YG+SEQ L E+F  A ++AP+++FIDE+D+IAP R++   E+ +R+V
Sbjct: 252 FLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNR D+++PALRRPGR DREIEI               V
Sbjct: 312 AQLLTLMDGMKERGHVIVIGATNRIDAVDPALRRPGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEIL----HALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EIL      +  GM+    +  +E ++  T+GFVGADLAAL  E+A+  LRRY
Sbjct: 358 PDRNGRKEILMIHTRNMPLGMDEEQKNKFLEEMADYTYGFVGADLAALVRESAMNALRRY 417



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 145/265 (54%), Gaps = 27/265 (10%)

Query: 385 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRP 443
           K++   +L    +E  NV          +GGL      +K+ +    +K      LG+RP
Sbjct: 447 KNIEPSSLREVMVEVPNVHW------DDIGGLEDVKREVKETVELPLLKPDVFKRLGIRP 500

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
           +KG LL+GPPG GKT LA+  A +S  N  ++ GPEV+S+  GESE+A+ E+F  A Q A
Sbjct: 501 SKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVA 560

Query: 504 PAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           PA+VF+DE+D+IAP R    D G  +++R+V  LL  +DG+   +GV+ I ATNRPD ++
Sbjct: 561 PAIVFLDEIDSIAPRRGTTSDSG--VTERIVNQLLTSLDGIEVMNGVVAIGATNRPDIMD 618

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
           PAL R GR D+ I I                P    RL IL      M  +  D +++ +
Sbjct: 619 PALLRAGRFDKLIYI--------------PPPDKDARLSILKVHTKNMPLA-PDVDLDSI 663

Query: 621 SMATHGFVGADLAALCNEAALVCLR 645
           +  T G+VGADL  LC EA +   R
Sbjct: 664 AQRTEGYVGADLENLCREAGMNAYR 688


>gi|448352711|ref|ZP_21541492.1| ATPase AAA [Natrialba hulunbeirensis JCM 10989]
 gi|445641990|gb|ELY95061.1| ATPase AAA [Natrialba hulunbeirensis JCM 10989]
          Length = 754

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/314 (46%), Positives = 201/314 (64%), Gaps = 17/314 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D ++A   ++PSAMREV +EVP V W DVGG  + K +L E ++WP  + E F+++  + 
Sbjct: 438  DLKEALKGIQPSAMREVFVEVPDVIWNDVGGLGDTKERLRETIQWPLDYPEVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREIFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  RE IF +H R  P +  + +  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEEARERIFEVHTRDKPLADAIELEWLAEETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            I++ +   RI  +H + A+  VQPS        Y+E+  +F
Sbjct: 678  REASMAASREFINSVDPDDIDDTIGNVRIGKEHFEHALEEVQPSVTPETRERYEEIEQQF 737

Query: 1033 QRLVHSNAEADESG 1046
             R      E D+ G
Sbjct: 738  -RQAEPGQEQDQLG 750



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 168/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DE+D +AA R  E 
Sbjct: 245  VANEIDADFQTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDELDSIAAKR--ED 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEIGVPDKD 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------E 998
             R+EI ++H R +P    +++   A  + G  GAD+  + RE A++A+           E
Sbjct: 363  GRKEILQVHTRGMPLEEGIDLDRYAENTHGFVGADLESLAREGAMNALRRIRPDLDLESE 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T   LK A++ +QPS
Sbjct: 423  EIDAEVLETLQVTEGDLKEALKGIQPS 449



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 110/237 (46%), Positives = 148/237 (62%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAD 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDELD+IA  R+D G ++ +R+V
Sbjct: 253 FQTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDELDSIAAKREDAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGM--EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  E  +   +++  +  THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKDGRKEILQVHTRGMPLEEGI---DLDRYAENTHGFVGADLESLAREGAMNALRR 412



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 153/284 (53%), Gaps = 24/284 (8%)

Query: 385 KSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLR 442
           K   +G  P+A  E F  V   +  D+   GGL      L++ I            + ++
Sbjct: 440 KEALKGIQPSAMREVFVEVPDVIWNDV---GGLGDTKERLRETIQWPLDYPEVFEQMDMQ 496

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
             KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E+F+ A  +
Sbjct: 497 AAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREIFEKARSN 556

Query: 503 APAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           AP V+F DE+D+IA  R  + G   + +R+V+ LL  +DG+   + V+VIA TNRPD I+
Sbjct: 557 APTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLID 616

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEY 619
            AL RPGRLDR + +               VP    R  I    +   +  L D+ E+E+
Sbjct: 617 SALLRPGRLDRHVHV--------------PVPDEEARERIFE--VHTRDKPLADAIELEW 660

Query: 620 LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTL 663
           L+  T G+VGAD+ A+C EA++   R +       D+  + G +
Sbjct: 661 LAEETEGYVGADIEAVCREASMAASREFINSVDPDDIDDTIGNV 704


>gi|169831648|ref|YP_001717630.1| ATPase AAA [Candidatus Desulforudis audaxviator MP104C]
 gi|169638492|gb|ACA59998.1| AAA family ATPase, CDC48 subfamily [Candidatus Desulforudis
            audaxviator MP104C]
          Length = 753

 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 146/298 (48%), Positives = 195/298 (65%), Gaps = 14/298 (4%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++ + DF +A   V PSA+REV +EVP V+W D+GG  +VK +L EAVEWP KH   F 
Sbjct: 441  LEVTMADFSEAFKDVEPSAIREVFVEVPDVRWSDIGGLDKVKQELKEAVEWPIKHPGLFT 500

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             + T PP GIL+ G PG  KTL+A+AVA+E+G+NF++VKGP L SKWVGESEK VR +F 
Sbjct: 501  YVKTNPPKGILLHGSPGTGKTLIAKAVANESGVNFISVKGPALLSKWVGESEKGVREVFK 560

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+  AP I+FFDEID L  +RG       V++RV+SQLL E+DG+ +   V V+AATNR
Sbjct: 561  KAKQAAPCIVFFDEIDALVPVRGTGGGDAHVAERVLSQLLTEMDGVEELKGVVVLAATNR 620

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             + IDPALLRPGRFD LL +  P E +R  I +IH    P + DV++  LA +++G TGA
Sbjct: 621  LELIDPALLRPGRFDLLLELPVPGEDERLAILQIHTNGKPLAEDVDLVNLAIITDGSTGA 680

Query: 983  DISLICREAAISAIEENLDAS-----------RITMQHLKTA---IRHVQPSEIHSYK 1026
            DI  IC  A++ AI E LD+S           +I  +H   A   +R  +P++I   K
Sbjct: 681  DIQAICNRASLLAIREFLDSSQNDKDPDYSRLQIAAKHFDAALEEVRRPEPAQIEDQK 738



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/267 (42%), Positives = 161/267 (60%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG ++   ++ E +E P K+ E F R+G   P G+L+ GPPG  KTL+ARAVA+
Sbjct: 197  ITYEDIGGLQKGIQRIREMIELPLKYPEIFARLGIEAPKGVLLHGPPGTGKTLIARAVAN 256

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F  V GPE+  K+ GESE  +R +F +A  NAPSIIF DEID +A  R  ES   
Sbjct: 257  ETDAHFFHVNGPEIIHKFYGESEANLRGIFEEAGKNAPSIIFLDEIDAIAPKR--ESVVG 314

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATN P+ +DPAL RPGRFDR + V  P++  R 
Sbjct: 315  EVEKRVVAQLLGLMDGLESRGQVIVIGATNIPNSLDPALRRPGRFDREITVNIPDKKSRL 374

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI +IH R +P S DV++ ++A ++ G  GAD++ +C+EAA++ +               
Sbjct: 375  EILQIHTRGMPLSKDVHLEKIAEITHGYVGADLAALCKEAAMACLRKVFPQIDLRSNYLS 434

Query: 998  -ENLDASRITMQHLKTAIRHVQPSEIH 1023
             E L    +TM     A + V+PS I 
Sbjct: 435  YEVLMELEVTMADFSEAFKDVEPSAIR 461



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/277 (42%), Positives = 170/277 (61%), Gaps = 21/277 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K    ++++I +        + LG+   KGVLLHGPPGTGKT +AR  A+++  +
Sbjct: 202 IGGLQKGIQRIREMIELPLKYPEIFARLGIEAPKGVLLHGPPGTGKTLIARAVANETDAH 261

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F VNGPE++ + YGESE  L  +F+ A ++AP+++F+DE+DAIAP R+    E+ +R+V
Sbjct: 262 FFHVNGPEIIHKFYGESEANLRGIFEEAGKNAPSIIFLDEIDAIAPKRESVVGEVEKRVV 321

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATN P+S++PALRRPGR DREI ++              +
Sbjct: 322 AQLLGLMDGLESRGQVIVIGATNIPNSLDPALRRPGRFDREITVN--------------I 367

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKI 650
           P    RLEIL     GM  S  D  +E ++  THG+VGADLAALC EAA+ CLR+ + +I
Sbjct: 368 PDKKSRLEILQIHTRGMPLS-KDVHLEKIAEITHGYVGADLAALCKEAAMACLRKVFPQI 426

Query: 651 QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS 687
              S+ L S   L E E    TM   S+  +++  S+
Sbjct: 427 DLRSNYL-SYEVLMELEV---TMADFSEAFKDVEPSA 459



 Score =  166 bits (420), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/241 (40%), Positives = 144/241 (59%), Gaps = 20/241 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVK--STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           S +GGL K    LK+ +    +K     + +   P KG+LLHG PGTGKT +A+  A++S
Sbjct: 473 SDIGGLDKVKQELKEAV-EWPIKHPGLFTYVKTNPPKGILLHGSPGTGKTLIAKAVANES 531

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--L 526
           GVN  +V GP ++S+  GESE+ + EVF  A Q+AP +VF DE+DA+ P R  GG +  +
Sbjct: 532 GVNFISVKGPALLSKWVGESEKGVREVFKKAKQAAPCIVFFDEIDALVPVRGTGGGDAHV 591

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           ++R+++ LL  MDGV    GV+V+AATNR + I+PAL RPGR D  +E+           
Sbjct: 592 AERVLSQLLTEMDGVEELKGVVVLAATNRLELIDPALLRPGRFDLLLEL----------- 640

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
               VP   +RL IL    +G   +  D ++  L++ T G  GAD+ A+CN A+L+ +R 
Sbjct: 641 ---PVPGEDERLAILQIHTNGKPLA-EDVDLVNLAIITDGSTGADIQAICNRASLLAIRE 696

Query: 647 Y 647
           +
Sbjct: 697 F 697


>gi|449548502|gb|EMD39468.1| hypothetical protein CERSUDRAFT_111775 [Ceriporiopsis subvermispora
            B]
          Length = 803

 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 135/274 (49%), Positives = 191/274 (69%), Gaps = 4/274 (1%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            VRPSA+R + L+   V+W D+GGQ  V  +L E VEWP  H +AF R+G R P G+L++G
Sbjct: 519  VRPSALRSLFLDTAPVRWADIGGQATVAARLRECVEWPLLHPDAFARLGVRAPKGVLLYG 578

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGCSKTL+ RA A+E+G+NFLAVKGPEL +K+VGESE+AVR +F+KARA APS++FFDE
Sbjct: 579  PPGCSKTLLVRACATESGVNFLAVKGPELLNKFVGESERAVREIFSKARAAAPSLLFFDE 638

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID LA  R        V + V++ LL E+DG+ + V VT++AATNRPD ID AL+RPGR 
Sbjct: 639  IDALATSRSSSDSSGGVHEGVLTSLLNEMDGVQELVGVTIVAATNRPDVIDSALMRPGRL 698

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR+LYVGPP++  REEI RI  R +     +    LA ++EGC+GA+++ +C+EAA+  +
Sbjct: 699  DRILYVGPPDKQGREEILRIRTRNMSVEPGLEFGVLADMTEGCSGAEMTSLCQEAALLTM 758

Query: 997  EENLDASRITMQHLKTAI----RHVQPSEIHSYK 1026
            +++++A  +  +    A     + + P  I  Y+
Sbjct: 759  KKDINAPYVPREAFVAAAQAIKKQITPDVIEQYE 792



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/305 (38%), Positives = 173/305 (56%), Gaps = 36/305 (11%)

Query: 356 TESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEF-QNVQATVEQD-ISKL 413
           T S+D     + +  +T V L P  NA       G  P A     Q ++ T + D  + +
Sbjct: 204 TLSLDTTPQLWTVGWDTTVVLEPHENA-------GRTPAANKPVAQTLEHTDKADAYASV 256

Query: 414 GGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
           GGL K+ A ++D+I I  +        GL+P +G+LLHGPPGTGKT LAR  A  +G  +
Sbjct: 257 GGLDKQIAQIRDLIEIPLTRPELFRHFGLKPPRGILLHGPPGTGKTHLARAIAASTGAAV 316

Query: 473 FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRMV 531
             VNGPE+ S  +GE+E  L +VF  A   +P +V +DE+DA+ P R+DG G E+ +R+V
Sbjct: 317 LVVNGPELSSAYHGETEARLRDVFADARARSPCIVVLDEVDALCPRREDGPGGEVEKRVV 376

Query: 532 ATLLNLMDGVCRTDG---------VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFS 582
           A LL +MDG+   DG         V+V+A TNRP++I+PALRRPGR DREIEI       
Sbjct: 377 AQLLTIMDGMA--DGGADADALGRVVVVATTNRPNAIDPALRRPGRFDREIEI------- 427

Query: 583 LLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV 642
                   +P   +R  IL+ LL    H +  +++  ++   HG+VGADL+A+  EA  +
Sbjct: 428 -------GIPDADERFSILNVLLKKTPHEISPNDLRSIAARAHGYVGADLSAVVREAGTL 480

Query: 643 CLRRY 647
            ++R+
Sbjct: 481 AIKRW 485



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/232 (41%), Positives = 134/232 (57%), Gaps = 9/232 (3%)

Query: 774 WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
           +  VGG  +   Q+ + +E P    E F+  G +PP GIL+ GPPG  KT +ARA+A+  
Sbjct: 253 YASVGGLDKQIAQIRDLIEIPLTRPELFRHFGLKPPRGILLHGPPGTGKTHLARAIAAST 312

Query: 834 GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
           G   L V GPEL S + GE+E  +R +FA ARA +P I+  DE+D L   R ++  G  V
Sbjct: 313 GAAVLVVNGPELSSAYHGETEARLRDVFADARARSPCIVVLDEVDALCP-RREDGPGGEV 371

Query: 894 SDRVMSQLLVELDGLHQR-------VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 946
             RV++QLL  +DG+            V V+A TNRP+ IDPAL RPGRFDR + +G P+
Sbjct: 372 EKRVVAQLLTIMDGMADGGADADALGRVVVVATTNRPNAIDPALRRPGRFDREIEIGIPD 431

Query: 947 ETDREEIFRIHLRKIPCSSDVN-IRELACLSEGCTGADISLICREAAISAIE 997
             +R  I  + L+K P     N +R +A  + G  GAD+S + REA   AI+
Sbjct: 432 ADERFSILNVLLKKTPHEISPNDLRSIAARAHGYVGADLSAVVREAGTLAIK 483



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/217 (42%), Positives = 127/217 (58%), Gaps = 25/217 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + LG+R  KGVLL+GPPG  KT L R CA +SGVN   V GPE++++  GESE+A+ E+
Sbjct: 563 FARLGVRAPKGVLLYGPPGCSKTLLVRACATESGVNFLAVKGPELLNKFVGESERAVREI 622

Query: 496 FDSASQSAPAVVFIDELDAIAP----ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           F  A  +AP+++F DE+DA+A     +   GG  + + ++ +LLN MDGV    GV ++A
Sbjct: 623 FSKARAAAPSLLFFDEIDALATSRSSSDSSGG--VHEGVLTSLLNEMDGVQELVGVTIVA 680

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--E 609
           ATNRPD I+ AL RPGRLDR           +L   P   P    R EIL      M  E
Sbjct: 681 ATNRPDVIDSALMRPGRLDR-----------ILYVGP---PDKQGREEILRIRTRNMSVE 726

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             L   E   L+  T G  GA++ +LC EAAL+ +++
Sbjct: 727 PGL---EFGVLADMTEGCSGAEMTSLCQEAALLTMKK 760


>gi|73670349|ref|YP_306364.1| cell division cycle protein [Methanosarcina barkeri str. Fusaro]
 gi|72397511|gb|AAZ71784.1| cell division cycle protein [Methanosarcina barkeri str. Fusaro]
          Length = 764

 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 203/319 (63%), Gaps = 11/319 (3%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DFE A   V+PSA+RE+++E+P V WEDVGG   VK  L EAVEWP K  E+++
Sbjct: 457  LRVTREDFENALKDVQPSAIREILIEIPNVSWEDVGGLEGVKQLLKEAVEWPLKSPESYR 516

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             IG   P G+L++GPPG  KTL+A+A+A E+  NF+  KG +L SKW GESEK +  +F+
Sbjct: 517  DIGVEAPKGVLLYGPPGTGKTLLAKAIAHESEANFITAKGSDLLSKWYGESEKRIAEVFS 576

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  APSIIF DE+D LA IRG       V+ R+++QLL E+DGL +   V VI ATNR
Sbjct: 577  RARQVAPSIIFLDELDSLAPIRGAAIGEPQVTARILNQLLSEMDGLEELRAVVVIGATNR 636

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD IDPALLRPGRFD L+ V  P+   R+EIFR+H  K+  + DV+I +L  +++  TGA
Sbjct: 637  PDIIDPALLRPGRFDELILVPVPDAGARKEIFRVHTAKMSLAEDVDIDKLVSMTDQYTGA 696

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEA 1042
            DI+ +C++A   A+ E+L A  +  +H   AI    PS        + K+ + V      
Sbjct: 697  DIAAVCKKAGRDALREDLHAKEVKQKHFLQAIAETGPSVTPD----TMKYYQAV------ 746

Query: 1043 DESGYQLRPSKSIGSNMWT 1061
             +SG + R SK I +  +T
Sbjct: 747  -QSGLRKRQSKEIETPFYT 764



 Score =  242 bits (617), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 122/270 (45%), Positives = 172/270 (63%), Gaps = 17/270 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG +E  T++ E +E P KH E F R+G   P G+L++GPPG  KT++A+A
Sbjct: 210  VPTVMYEDLGGVKEAITKIREMIELPLKHPELFDRLGIDAPKGVLLYGPPGTGKTMLAKA 269

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E    F++V GPE+ SK+ GESEK +R +F  A  NAP+IIF DEID +A  R + +
Sbjct: 270  VANETDAYFISVNGPEIMSKYYGESEKGIRDVFEDAEKNAPAIIFLDEIDSIAPKRAEVT 329

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V  RV++QLL  +DGL  R NV VI +TNRP+ ID AL RPGRFDR + +  P+  
Sbjct: 330  G--EVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEAIDMALRRPGRFDREIELRVPDTE 387

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EIF+IH R +P + +VN+ + A ++ G  GADI+ +CREAA+S++            
Sbjct: 388  GRLEIFQIHTRGMPLAENVNLMDFAQITYGFVGADIAALCREAAMSSLRRILPKINLNEP 447

Query: 998  ----ENLDASRITMQHLKTAIRHVQPSEIH 1023
                E LD  R+T +  + A++ VQPS I 
Sbjct: 448  EIPSEILDTLRVTREDFENALKDVQPSAIR 477



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/250 (43%), Positives = 155/250 (62%), Gaps = 23/250 (9%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           QNV   + +D   LGG+ +    ++++I +          LG+   KGVLL+GPPGTGKT
Sbjct: 208 QNVPTVMYED---LGGVKEAITKIREMIELPLKHPELFDRLGIDAPKGVLLYGPPGTGKT 264

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            LA+  A+++     +VNGPE++S+ YGESE+ + +VF+ A ++APA++F+DE+D+IAP 
Sbjct: 265 MLAKAVANETDAYFISVNGPEIMSKYYGESEKGIRDVFEDAEKNAPAIIFLDEIDSIAPK 324

Query: 519 RKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
           R +   E+ +R+VA LL+LMDG+     V+VI +TNRP++I+ ALRRPGR DREIE+   
Sbjct: 325 RAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEAIDMALRRPGRFDREIEL--- 381

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALC 636
                       VP    RLEI      GM    L   V  +  A  T+GFVGAD+AALC
Sbjct: 382 -----------RVPDTEGRLEIFQIHTRGMP---LAENVNLMDFAQITYGFVGADIAALC 427

Query: 637 NEAALVCLRR 646
            EAA+  LRR
Sbjct: 428 REAAMSSLRR 437



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 136/237 (57%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDIIISSSVKS--TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           +GGL     +LK+ +    +KS  +   +G+   KGVLL+GPPGTGKT LA+  AH+S  
Sbjct: 491 VGGLEGVKQLLKEAV-EWPLKSPESYRDIGVEAPKGVLLYGPPGTGKTLLAKAIAHESEA 549

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD--GGEELSQ 528
           N  T  G +++S+ YGESE+ + EVF  A Q AP+++F+DELD++AP R    G  +++ 
Sbjct: 550 NFITAKGSDLLSKWYGESEKRIAEVFSRARQVAPSIIFLDELDSLAPIRGAAIGEPQVTA 609

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R++  LL+ MDG+     V+VI ATNRPD I+PAL RPGR D  I +             
Sbjct: 610 RILNQLLSEMDGLEELRAVVVIGATNRPDIIDPALLRPGRFDELILV------------- 656

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             VP    R EI     + M  +  D +++ L   T  + GAD+AA+C +A    LR
Sbjct: 657 -PVPDAGARKEIFRVHTAKMSLA-EDVDIDKLVSMTDQYTGADIAAVCKKAGRDALR 711


>gi|389848139|ref|YP_006350378.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            mediterranei ATCC 33500]
 gi|448618236|ref|ZP_21666581.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            mediterranei ATCC 33500]
 gi|388245445|gb|AFK20391.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            mediterranei ATCC 33500]
 gi|445747791|gb|ELZ99246.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax
            mediterranei ATCC 33500]
          Length = 754

 Score =  287 bits (734), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 139/302 (46%), Positives = 201/302 (66%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   + PSA+REV +EVP V W+DVGG  + K +L E ++WP ++ E F+ +    
Sbjct: 437  DFKQALKGIEPSALREVFVEVPDVTWKDVGGLGDTKERLRETIQWPLEYPEVFQAMDMDA 496

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR NA
Sbjct: 497  AKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVFKKARENA 556

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +AA RG ++    V++RV+SQLL ELDGL    +V VIA TNRPD ID 
Sbjct: 557  PTVVFFDEIDSIAAERGSDTTSSGVTERVVSQLLTELDGLEALEDVVVIATTNRPDLIDA 616

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R  I  +H R+ P + DV++ ++A  +EG  GAD+  + 
Sbjct: 617  ALLRPGRLDRHVHVPVPDEEARRAILDVHTREKPLADDVDLDKIASKTEGYVGADLEALA 676

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            I+E++   R+TM+H + A+  + PS        Y E+  +F
Sbjct: 677  REASMNASREFIQSVNKEEIDESIGNVRVTMEHFENALDEIGPSVTDDVRRRYDEIEERF 736

Query: 1033 QR 1034
            Q+
Sbjct: 737  QK 738



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 164/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DE+D +A  RG+   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREVFEEATENSPAIVFIDELDSIAPKRGEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDTALRRGGRFDREIEIGVPDRDG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + D+++   A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEILQVHTRNMPLTDDIDLDAYADSTHGFVGADLESLAKESAMHALRRIRPQLDLEAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      R+T    K A++ ++PS
Sbjct: 423  IDAEVLETLRVTEDDFKQALKGIEPS 448



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/235 (45%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A++++PA+VFIDELD+IAP R + G ++ +R+V
Sbjct: 252 FHTISGPEIMSKYYGESEEQLREVFEEATENSPAIVFIDELDSIAPKRGEAGGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLDERGEVVVIGATNRVDAIDTALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL      M  +  D +++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 358 PDRDGRKEILQVHTRNMPLT-DDIDLDAYADSTHGFVGADLESLAKESAMHALRR 411



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 137/245 (55%), Gaps = 23/245 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             ++ +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + EV
Sbjct: 489 FQAMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREV 548

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG--GEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A ++AP VVF DE+D+IA  R        +++R+V+ LL  +DG+   + V+VIA T
Sbjct: 549 FKKARENAPTVVFFDEIDSIAAERGSDTTSSGVTERVVSQLLTELDGLEALEDVVVIATT 608

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+ AL RPGRLDR + +               VP    R  IL   +   E  L 
Sbjct: 609 NRPDLIDAALLRPGRLDRHVHV--------------PVPDEEARRAILD--VHTREKPLA 652

Query: 614 DS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLFEFEG 668
           D  +++ ++  T G+VGADL AL  EA++   R + +     ++  S G    T+  FE 
Sbjct: 653 DDVDLDKIASKTEGYVGADLEALAREASMNASREFIQSVNKEEIDESIGNVRVTMEHFEN 712

Query: 669 HSDTM 673
             D +
Sbjct: 713 ALDEI 717


>gi|452208862|ref|YP_007488976.1| Cell division protein FtsH [Methanosarcina mazei Tuc01]
 gi|452098764|gb|AGF95704.1| Cell division protein FtsH [Methanosarcina mazei Tuc01]
          Length = 764

 Score =  286 bits (732), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 136/279 (48%), Positives = 187/279 (67%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   DFE A   V+PSA+RE+++EVP + W+DVGG   VK  L EAVEWP K  E++
Sbjct: 456  SLQVTREDFENALKDVQPSAIREILIEVPNIGWDDVGGLGGVKELLKEAVEWPLKSPESY 515

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + IG   P G+L++GPPG  KTL+A+A+A E+  NF+  KG +L SKW GESEK +  +F
Sbjct: 516  RNIGVEAPKGVLLYGPPGTGKTLLAKAIAHESDANFITAKGSDLLSKWYGESEKRIAEVF 575

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             +AR  APSIIF DE+D LA +RG  +    V+ R+++QLL E+DGL +   V VI ATN
Sbjct: 576  TRARQVAPSIIFLDELDSLAPVRGASTGEPQVTARILNQLLSEMDGLEELRAVVVIGATN 635

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD IDPALLRPGRFD L+ V  P+E  R EIFR+H   +  + DV+I +L  L++  TG
Sbjct: 636  RPDMIDPALLRPGRFDELILVPVPDEGARREIFRVHTENMALAEDVDIEKLVSLTDQYTG 695

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            ADI+ +C++A   A+ E+L A  +  +H   AI    PS
Sbjct: 696  ADIAAVCKKAGRYALREDLHAKNVRQKHFLQAIEETGPS 734



 Score =  235 bits (600), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 118/270 (43%), Positives = 173/270 (64%), Gaps = 17/270 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P V +ED+GG ++   ++ E +E P KH E F R+G   P G+L+ GPPG  KT++A+A
Sbjct: 210  IPTVMYEDLGGLKDAIGKVREMIELPLKHPELFDRLGIDAPKGVLLHGPPGTGKTMLAKA 269

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E+   F+++ GPE+ SK+ GESE+A+R +F  A  NAP+IIF DEID +A  R + +
Sbjct: 270  VANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIFLDEIDSIAPKRAEVT 329

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V  RV++QLL  +DGL  R NV VI +TNRP+ ID AL RPGRFDR + +  P+  
Sbjct: 330  G--EVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEAIDIALRRPGRFDREIELRVPDTE 387

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EIF+IH R +P + +VN+ + A ++ G  GADI+ +CREAA+SA+            
Sbjct: 388  GRLEIFQIHTRGMPLADNVNLMDFAQITYGFVGADIAALCREAAMSALRRILPKINLNEP 447

Query: 998  ----ENLDASRITMQHLKTAIRHVQPSEIH 1023
                E LD+ ++T +  + A++ VQPS I 
Sbjct: 448  EIPGEILDSLQVTREDFENALKDVQPSAIR 477



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 155/250 (62%), Gaps = 23/250 (9%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           QN+   + +D   LGGL      ++++I +          LG+   KGVLLHGPPGTGKT
Sbjct: 208 QNIPTVMYED---LGGLKDAIGKVREMIELPLKHPELFDRLGIDAPKGVLLHGPPGTGKT 264

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            LA+  A++S     ++NGPE++S+ YGESE+A+ E+F+ A ++APA++F+DE+D+IAP 
Sbjct: 265 MLAKAVANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIFLDEIDSIAPK 324

Query: 519 RKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
           R +   E+ +R+VA LL+LMDG+     V+VI +TNRP++I+ ALRRPGR DREIE+   
Sbjct: 325 RAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEAIDIALRRPGRFDREIEL--- 381

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALC 636
                       VP    RLEI      GM    L   V  +  A  T+GFVGAD+AALC
Sbjct: 382 -----------RVPDTEGRLEIFQIHTRGMP---LADNVNLMDFAQITYGFVGADIAALC 427

Query: 637 NEAALVCLRR 646
            EAA+  LRR
Sbjct: 428 REAAMSALRR 437



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/241 (39%), Positives = 139/241 (57%), Gaps = 23/241 (9%)

Query: 409 DISKLGGLSKEYAILKDIIISSSVKS--TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAH 466
           D+  LGG+ +   +LK+ +    +KS  +  ++G+   KGVLL+GPPGTGKT LA+  AH
Sbjct: 490 DVGGLGGVKE---LLKEAV-EWPLKSPESYRNIGVEAPKGVLLYGPPGTGKTLLAKAIAH 545

Query: 467 DSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGE 524
           +S  N  T  G +++S+ YGESE+ + EVF  A Q AP+++F+DELD++AP R    G  
Sbjct: 546 ESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPVRGASTGEP 605

Query: 525 ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
           +++ R++  LL+ MDG+     V+VI ATNRPD I+PAL RPGR D  I +         
Sbjct: 606 QVTARILNQLLSEMDGLEELRAVVVIGATNRPDMIDPALLRPGRFDELILV--------- 656

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 VP    R EI       M  +  D ++E L   T  + GAD+AA+C +A    L
Sbjct: 657 -----PVPDEGARREIFRVHTENMALA-EDVDIEKLVSLTDQYTGADIAAVCKKAGRYAL 710

Query: 645 R 645
           R
Sbjct: 711 R 711


>gi|448378211|ref|ZP_21560685.1| ATPase AAA [Halovivax asiaticus JCM 14624]
 gi|445654193|gb|ELZ07047.1| ATPase AAA [Halovivax asiaticus JCM 14624]
          Length = 754

 Score =  286 bits (732), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 143/320 (44%), Positives = 208/320 (65%), Gaps = 16/320 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L+++ VDF++A   ++PSA+REV +EVP V W+DVGG    + +L E ++WP  + E F 
Sbjct: 431  LQVKEVDFKEALKGIQPSALREVFVEVPDVTWDDVGGLEATEERLRETIQWPLDYPEVFA 490

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +  + P G+LM+GPPG  KTL+A+AVA+E+  NF++VKGPEL +K+VGESEK +R +F 
Sbjct: 491  EMDMQAPKGVLMYGPPGTGKTLLAKAVANESQSNFISVKGPELLNKFVGESEKGIREVFE 550

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR+NAP++IFFDEID +A  RG+ S    VS+R++SQLL ELDGL +  +V VIA TNR
Sbjct: 551  KARSNAPTVIFFDEIDSIAGERGRNSGDSGVSERMVSQLLTELDGLEELEDVVVIATTNR 610

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR ++V  P+E  R +IF +H    P +  +++  LA  +EG  GA
Sbjct: 611  PDLIDSALLRPGRLDRHIHVPVPDEAARRKIFAVHTEHKPLADAIDLDWLAAETEGYVGA 670

Query: 983  DISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYK 1026
            DI  + REA+++A            +++ L   RI+ +H + A+  V PS        Y+
Sbjct: 671  DIEAVTREASMAATREFINSVDPDEMDDTLGNVRISKEHFEHALAEVSPSVTTETRERYE 730

Query: 1027 ELSAKFQRLVHSNAEADESG 1046
            E+  +F     + AE D+ G
Sbjct: 731  EIEEQFDSAEPAAAEGDQLG 750



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/267 (42%), Positives = 168/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 184  VPDVTYEDIGGLEGELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 243

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DEID +A+ R +E+
Sbjct: 244  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIASKR-EET 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  SG-DVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKE 361

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EI ++H R +P    +++ + A  + G  GAD++ + REAA++A+            
Sbjct: 362  GRTEILQVHTRGMPLVDSIDLDQYAENTHGFVGADLATLAREAAMNALRRIRPELDLEEE 421

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E L+  ++     K A++ +QPS
Sbjct: 422  EIDAEVLETLQVKEVDFKEALKGIQPS 448



 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 151/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLEGELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDE+D+IA  R++   ++ +R+V
Sbjct: 252 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIASKREETSGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L+DS +++  +  THGFVGADLA L  EAA+  LRR
Sbjct: 358 PDKEGRTEILQVHTRGM--PLVDSIDLDQYAENTHGFVGADLATLAREAAMNALRR 411



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 155/276 (56%), Gaps = 30/276 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            + + ++  KGVL++GPPGTGKT LA+  A++S  N  +V GPE++++  GESE+ + EV
Sbjct: 489 FAEMDMQAPKGVLMYGPPGTGKTLLAKAVANESQSNFISVKGPELLNKFVGESEKGIREV 548

Query: 496 FDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F+ A  +AP V+F DE+D+IA    R  G   +S+RMV+ LL  +DG+   + V+VIA T
Sbjct: 549 FEKARSNAPTVIFFDEIDSIAGERGRNSGDSGVSERMVSQLLTELDGLEELEDVVVIATT 608

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS-L 612
           NRPD I+ AL RPGRLDR I +               VP  A R +I        EH  L
Sbjct: 609 NRPDLIDSALLRPGRLDRHIHV--------------PVPDEAARRKIFAVH---TEHKPL 651

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSD 671
            D+ ++++L+  T G+VGAD+ A+  EA++   R +       ++  + G +   + H +
Sbjct: 652 ADAIDLDWLAAETEGYVGADIEAVTREASMAATREFINSVDPDEMDDTLGNVRISKEHFE 711

Query: 672 TMLQDSDCSRNITESSR-------DCLDSASPCTSD 700
             L  ++ S ++T  +R       +  DSA P  ++
Sbjct: 712 HAL--AEVSPSVTTETRERYEEIEEQFDSAEPAAAE 745


>gi|448303002|ref|ZP_21492952.1| ATPase AAA [Natronorubrum sulfidifaciens JCM 14089]
 gi|445594009|gb|ELY48176.1| ATPase AAA [Natronorubrum sulfidifaciens JCM 14089]
          Length = 754

 Score =  286 bits (732), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 145/320 (45%), Positives = 204/320 (63%), Gaps = 17/320 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF++A   ++PSAMREV +EVP V W DVGG  + K +L E ++WP  + E F+
Sbjct: 432  LQVNKQDFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGDTKERLRETIQWPLDYPEVFE 491

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +      G++M+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F 
Sbjct: 492  AMDMDAAKGVMMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKYVGESEKGVREIFE 551

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR+NAP++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNR
Sbjct: 552  KARSNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNR 611

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR ++V  P+E  R++IF +H R  P +  V++ +LA  +EG  GA
Sbjct: 612  PDLIDSALLRPGRLDRHVHVPVPDEDGRKKIFEVHTRNKPLADTVDLDDLAARTEGYVGA 671

Query: 983  DISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYK 1026
            DI  + REA+++A            I +++   RI+  H   A+  V PS        Y+
Sbjct: 672  DIEAVTREASMAASREFITSVDPEDIGDSVGNVRISTDHFDHALEEVGPSVTPETREQYE 731

Query: 1027 ELSAKFQRLVHSNAEADESG 1046
            EL  +FQ+      E D+ G
Sbjct: 732  ELEEQFQQ-AEPTTEKDQLG 750



 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 167/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVTYEDIGGLDNELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAPSI+F DE+D +A  R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEKLREVFEEAEENAPSIVFIDELDSIAPKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEIGVPDKE 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------E 998
             R+EI ++H R +P +  V++   A  + G  GAD+  + RE+A++A+           E
Sbjct: 363  GRKEILQVHTRGMPLTDSVDLEHYASNTHGFVGADLESLARESAMNALRRIRPELDLESE 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++  Q  K A++ +QPS
Sbjct: 423  EIDADVLDRLQVNKQDFKEALKGIQPS 449



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/236 (47%), Positives = 152/236 (64%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDNELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++AP++VFIDELD+IAP R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEKLREVFEEAEENAPSIVFIDELDSIAPKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L DS ++E+ +  THGFVGADL +L  E+A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGM--PLTDSVDLEHYASNTHGFVGADLESLARESAMNALRR 412



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 153/297 (51%), Gaps = 25/297 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I           ++ +   KGV+++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLGDTKERLRETIQWPLDYPEVFEAMDMDAAKGVMMYGPPGTGKTLLAKAVANEAE 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + E+F+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREIFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP    R +I    +      L D+ +++ L+  T G+VGAD+ A+  EA++   R 
Sbjct: 632 --PVPDEDGRKKIFE--VHTRNKPLADTVDLDDLAARTEGYVGADIEAVTREASMAASRE 687

Query: 647 YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCS-----RNITESSRDCLDSASPCT 698
           +       D+  S G +     H D  L++   S     R   E   +    A P T
Sbjct: 688 FITSVDPEDIGDSVGNVRISTDHFDHALEEVGPSVTPETREQYEELEEQFQQAEPTT 744


>gi|50285721|ref|XP_445289.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524593|emb|CAG58195.1| unnamed protein product [Candida glabrata]
          Length = 771

 Score =  286 bits (732), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 132/294 (44%), Positives = 206/294 (70%), Gaps = 7/294 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+ + D E A +++RPSAMRE+ LE+PKV W D+GGQ ++K ++ E ++ P +  + F 
Sbjct: 475  LKVGITDVESAMLEIRPSAMREIFLEMPKVYWSDIGGQEDLKRKMKEMIQLPLEAADTFA 534

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G + P GIL++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F 
Sbjct: 535  ALGIKAPKGILLYGPPGCSKTLTAKALATESGVNFLAVKGPEIFNKYVGESERAIREIFR 594

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +PSIIFFDEID L+  R   S   S ++ V++ LL E+DG+ +   V ++AATNR
Sbjct: 595  KARAASPSIIFFDEIDALSPDRDGSS--TSAANHVLTSLLNEIDGVEELNGVVIVAATNR 652

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCTG 981
            PD+ID ALLRPGR DR +YV PP+   R +I +   +     ++D  + +LA  +EGC+G
Sbjct: 653  PDEIDSALLRPGRLDRHVYVSPPDFNARLQILKKCTKNFDLDNTDELLNDLATRTEGCSG 712

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            A++ L+C+EA ++AI +++   ++   H + A+    + + P  +  Y+E +++
Sbjct: 713  AEVVLLCQEAGLAAIMDDIHTKKVDANHFEVALQGISKCITPEMLEYYQEFASR 766



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 100/249 (40%), Positives = 153/249 (61%), Gaps = 19/249 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E  +LK  I +        +  G+ P KG+L+HGPPGTGKT L R  A+ S  +
Sbjct: 238 VGGLKCEIDLLKKAIDLPLHRPEIFADFGISPPKGILMHGPPGTGKTMLLRCVANASNAH 297

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRM 530
           + +++GP +VS+  GE+E  L E+F+ A +  PA++FIDE+D+IAP R  D   E+  R+
Sbjct: 298 VLSIDGPSIVSKYLGETESKLREIFNEAKKYQPAIIFIDEIDSIAPNRANDDSGEVESRV 357

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           VATLL LMDG   +  + VIAATNRP++++PALRRPGR D+EIEI               
Sbjct: 358 VATLLTLMDGTSSSGRIAVIAATNRPNAVDPALRRPGRFDQEIEI--------------G 403

Query: 591 VPSPAQRLEILHAL---LSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           +P    R +IL      +S  +H+L + +++ ++  THG+VGADL ALC E+ +  +++ 
Sbjct: 404 IPDVDARFDILKKQFEKISTDKHTLSEGDIKSIASKTHGYVGADLTALCRESVMKTIQKA 463

Query: 648 SKIQTSSDV 656
               +++D+
Sbjct: 464 LTENSTTDM 472



 Score =  181 bits (458), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 160/279 (57%), Gaps = 9/279 (3%)

Query: 748  VDFEKARMKVRPSAMREV--ILEVPK-VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            V F+K   K++ +A + V     +P+ + ++ VGG +     L +A++ P    E F   
Sbjct: 206  VLFKKGLTKLKFTADKNVSKKYSLPQSLSYDAVGGLKCEIDLLKKAIDLPLHRPEIFADF 265

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G  PP GILM GPPG  KT++ R VA+ +  + L++ GP + SK++GE+E  +R +F +A
Sbjct: 266  GISPPKGILMHGPPGTGKTMLLRCVANASNAHVLSIDGPSIVSKYLGETESKLREIFNEA 325

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            +   P+IIF DEID +A  R  +  G  V  RV++ LL  +DG      + VIAATNRP+
Sbjct: 326  KKYQPAIIFIDEIDSIAPNRANDDSG-EVESRVVATLLTLMDGTSSSGRIAVIAATNRPN 384

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS----SDVNIRELACLSEGCT 980
             +DPAL RPGRFD+ + +G P+   R +I +    KI       S+ +I+ +A  + G  
Sbjct: 385  AVDPALRRPGRFDQEIEIGIPDVDARFDILKKQFEKISTDKHTLSEGDIKSIASKTHGYV 444

Query: 981  GADISLICREAAISAIEENLDASRIT-MQHLKTAIRHVQ 1018
            GAD++ +CRE+ +  I++ L  +  T M  LK  I  V+
Sbjct: 445  GADLTALCRESVMKTIQKALTENSTTDMTELKVGITDVE 483



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 133/235 (56%), Gaps = 15/235 (6%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG       +K++I +      T ++LG++  KG+LL+GPPG  KT  A+  A +SG
Sbjct: 507 SDIGGQEDLKRKMKEMIQLPLEAADTFAALGIKAPKGILLYGPPGCSKTLTAKALATESG 566

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           VN   V GPE+ ++  GESE+A+ E+F  A  ++P+++F DE+DA++P R       +  
Sbjct: 567 VNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDALSPDRDGSSTSAANH 626

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++ +LLN +DGV   +GV+++AATNRPD I+ AL RPGRLDR + +           SP 
Sbjct: 627 VLTSLLNEIDGVEELNGVVIVAATNRPDEIDSALLRPGRLDRHVYV-----------SP- 674

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
             P    RL+IL       +    D  +  L+  T G  GA++  LC EA L  +
Sbjct: 675 --PDFNARLQILKKCTKNFDLDNTDELLNDLATRTEGCSGAEVVLLCQEAGLAAI 727


>gi|320582960|gb|EFW97177.1| ATPase family protein [Ogataea parapolymorpha DL-1]
          Length = 744

 Score =  286 bits (732), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 137/297 (46%), Positives = 206/297 (69%), Gaps = 10/297 (3%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            K+   D E++R +++PSAMRE++LE+PKV W+D+GGQ  +K +L E V+ P      F+R
Sbjct: 449  KVSFADVEESRSEIQPSAMREIVLEMPKVSWDDIGGQEVLKRKLKEMVQLPLTAANTFRR 508

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G   P G+L++GPPGCSKTL A+A+ASE+GLNFLA+KGPE+F+K+VGESE+ +R +F K
Sbjct: 509  LGISAPKGLLLYGPPGCSKTLTAKALASESGLNFLAIKGPEVFNKYVGESERKIREIFHK 568

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            AR +APSIIF DEID LA  R  E  G +VS +V++ +L E+DG+ +   V +I ATNRP
Sbjct: 569  ARTSAPSIIFIDEIDALATNRDSEDAG-NVSRQVLNSMLNEIDGVEELKGVIIIGATNRP 627

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFR---IHLRKIPCSSDVNIRELACLSEGCT 980
            D IDPALLRPGR DR +YV PP+   R++I     +H   +P +  + I +L+ L+EG +
Sbjct: 628  DSIDPALLRPGRLDRHVYVAPPDRHARKQILEKNTVHF-NLP-NRVLLIEKLSDLTEGFS 685

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAKFQ 1033
            G++  L+C+EA ++A+ EN D  ++  +H  TA+    +++ P  +  Y E   +++
Sbjct: 686  GSETVLLCQEAGLAAVMENNDCQQVEERHFMTALNDISKNITPEMLEYYTEFGERYR 742



 Score =  167 bits (424), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/274 (38%), Positives = 153/274 (55%), Gaps = 29/274 (10%)

Query: 385 KSLREGTLPN--AQIEFQNVQA----TVEQDISKLGGLSKEYAILKDII-ISSSVKSTLS 437
           K+LR   L +   +IEF  VQ     +     SK+GGL K+   LK  I I         
Sbjct: 183 KTLRPFLLHHKTTKIEFHTVQQLQPPSAPYSYSKIGGLRKQIETLKRTIDIPLFRPDIFQ 242

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDS-GVNLFTVNGPEVVSQNYGESEQALHEVF 496
             G+ P +GVLLHG  GTGK+ L +  A +S G ++  ++GP +VS+  G +E+ L E F
Sbjct: 243 RFGIDPPRGVLLHGSSGTGKSLLLKSVAFESQGCHVINISGPSIVSKYLGGTEEKLREYF 302

Query: 497 DSASQSAPAVVFIDELDAIAPARKDGG-EELSQRMVATLLNLMDGVCRTDG-VLVIAATN 554
             A +  PA++ IDE+D++ P+R +    E+  R+ ATLL  +D +   DG V+VI ATN
Sbjct: 303 KEAMKYQPAIILIDEIDSLTPSRNNEDVSEVDTRVTATLLMALDSI---DGAVVVIGATN 359

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSL 612
           R +SI+ +LRRPGR D+EIEI               +P    R +IL    + M  +H L
Sbjct: 360 RINSIDASLRRPGRFDQEIEI--------------PIPDAESRYDILSTQFAAMKGQHEL 405

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            DS++  ++  THG+VGADL +LC E+ L C+ R
Sbjct: 406 TDSQIRVIANTTHGYVGADLVSLCRESILKCISR 439



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/256 (38%), Positives = 139/256 (54%), Gaps = 37/256 (14%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           +T   LG+   KG+LL+GPPG  KT  A+  A +SG+N   + GPEV ++  GESE+ + 
Sbjct: 504 NTFRRLGISAPKGLLLYGPPGCSKTLTAKALASESGLNFLAIKGPEVFNKYVGESERKIR 563

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           E+F  A  SAP+++FIDE+DA+A  R  +D G  +S++++ ++LN +DGV    GV++I 
Sbjct: 564 EIFHKARTSAPSIIFIDEIDALATNRDSEDAG-NVSRQVLNSMLNEIDGVEELKGVIIIG 622

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPDSI+PAL RPGRLDR + +              A P    R +IL        H 
Sbjct: 623 ATNRPDSIDPALLRPGRLDRHVYV--------------APPDRHARKQILE---KNTVHF 665

Query: 612 LLDSEV---EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEG 668
            L + V   E LS  T GF G++   LC EA L  +   +  Q               E 
Sbjct: 666 NLPNRVLLIEKLSDLTEGFSGSETVLLCQEAGLAAVMENNDCQQVE------------ER 713

Query: 669 HSDTMLQDSDCSRNIT 684
           H  T L  +D S+NIT
Sbjct: 714 HFMTAL--NDISKNIT 727



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 133/255 (52%), Gaps = 11/255 (4%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  +GG R+    L   ++ P    + F+R G  PP G+L+ G  G  K+L+ ++VA E+
Sbjct: 214  YSKIGGLRKQIETLKRTIDIPLFRPDIFQRFGIDPPRGVLLHGSSGTGKSLLLKSVAFES 273

Query: 834  -GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVS 892
             G + + + GP + SK++G +E+ +R  F +A    P+II  DEID L   R  E D   
Sbjct: 274  QGCHVINISGPSIVSKYLGGTEEKLREYFKEAMKYQPAIILIDEIDSLTPSRNNE-DVSE 332

Query: 893  VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
            V  RV + LL+ LD +     V VI ATNR + ID +L RPGRFD+ + +  P+   R +
Sbjct: 333  VDTRVTATLLMALDSIDG--AVVVIGATNRINSIDASLRRPGRFDQEIEIPIPDAESRYD 390

Query: 953  IFRIHLRKIPCS---SDVNIRELACLSEGCTGADISLICREAAISAIEENL----DASRI 1005
            I       +      +D  IR +A  + G  GAD+  +CRE+ +  I   L    +  ++
Sbjct: 391  ILSTQFAAMKGQHELTDSQIRVIANTTHGYVGADLVSLCRESILKCISRGLTTHQENQKV 450

Query: 1006 TMQHLKTAIRHVQPS 1020
            +   ++ +   +QPS
Sbjct: 451  SFADVEESRSEIQPS 465


>gi|448361764|ref|ZP_21550377.1| ATPase AAA [Natrialba asiatica DSM 12278]
 gi|445649444|gb|ELZ02381.1| ATPase AAA [Natrialba asiatica DSM 12278]
          Length = 754

 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 140/302 (46%), Positives = 199/302 (65%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D ++A   ++PSAMREV +EVP V W DVGG    K +L E ++WP  + + F+++  + 
Sbjct: 438  DLKEALKGIQPSAMREVFVEVPDVSWNDVGGLENTKERLRETIQWPLDYPQVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESE+ VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESERGVREIFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGQRGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDT 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  RE IF +H R  P +  V +  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEAARERIFEVHTRDKPLADAVELDWLAEETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            I++++   RI+ +H + A+  VQPS        Y+++  +F
Sbjct: 678  REASMAASREFINSVDPDDIDDSVGNVRISKEHFEHALDEVQPSVTPETRERYEDIEQQF 737

Query: 1033 QR 1034
            Q+
Sbjct: 738  QQ 739



 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 170/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  IPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F  A  NAP+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFQTISGPEIMSKYYGESEEQLREVFEDAEENAPAIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEIGVPDKD 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EE 998
             R+EI ++H R +P   ++++   A  + G  GADI  + RE+A++A+          E+
Sbjct: 363  GRKEILQVHTRGMPLEDEIDLDRYAENTHGFVGADIESLTRESAMNALRRIRPDLDLEEQ 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T   LK A++ +QPS
Sbjct: 423  EIDAEVLETLQVTEDDLKEALKGIQPS 449



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/237 (45%), Positives = 149/237 (62%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FQTISGPEIMSKYYGESEEQLREVFEDAEENAPAIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM    L+ E++    A  THGFVGAD+ +L  E+A+  LRR
Sbjct: 359 PDKDGRKEILQVHTRGMP---LEDEIDLDRYAENTHGFVGADIESLTRESAMNALRR 412



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 144/257 (56%), Gaps = 20/257 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            + ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLENTKERLRETIQWPLDYPQVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + E+F+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESERGVREIFEKARSNAPTVIFFDEIDSIAGQRGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDTALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP  A R  I    +   +  L D+ E+++L+  T G+VGAD+ A+C EA++   R 
Sbjct: 632 --PVPDEAARERIFE--VHTRDKPLADAVELDWLAEETEGYVGADIEAVCREASMAASRE 687

Query: 647 YSKIQTSSDVLHSTGTL 663
           +       D+  S G +
Sbjct: 688 FINSVDPDDIDDSVGNV 704


>gi|448391671|ref|ZP_21566766.1| ATPase AAA [Haloterrigena salina JCM 13891]
 gi|445665083|gb|ELZ17761.1| ATPase AAA [Haloterrigena salina JCM 13891]
          Length = 754

 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 142/300 (47%), Positives = 198/300 (66%), Gaps = 16/300 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W+DVGG  + K +L E V+WP  + E F  +  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWDDVGGLEDTKERLRENVQWPLDYPEVFDELDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KARANA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVFEKARANA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG++     V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGQRGRQQSDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDK 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R++IF +H R  P +  V++  LA  +EG  GADI  + 
Sbjct: 618  ALLRPGRLDRHVHVPVPDEGARKKIFEVHTRDKPLADAVDLDWLAGETEGYVGADIEAVT 677

Query: 989  REAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A  E +++             RI+ +H + A+  V PS        Y+E+  +F
Sbjct: 678  REASMAASREFINSVDPEEMADTIGNVRISKEHFEHALEEVNPSVTPETREQYEEIEEQF 737



 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 167/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVTYEDIGGLDNELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR--ED 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEIGVPDKD 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EE 998
             R+EI ++H R +P    +++ + A  + G  GAD+  + RE A++A+          E+
Sbjct: 363  GRKEILQVHTRGMPLQESIDLDQYAENTHGFVGADLESLTREGAMNALRRIRPDLDLEED 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA       +T    K A++ +QPS
Sbjct: 423  EIDAEVLETLEVTEGDFKEALKGIQPS 449



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 149/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDNELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R+D G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKREDAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L +S +++  +  THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKDGRKEILQVHTRGM--PLQESIDLDQYAENTHGFVGADLESLTREGAMNALRR 412



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 150/276 (54%), Gaps = 28/276 (10%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               L ++  KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 489 VFDELDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVRE 548

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           VF+ A  +AP V+F DE+D+IA  R     D G  + +R+V+ LL  +DG+   + V+VI
Sbjct: 549 VFEKARANAPTVIFFDEIDSIAGQRGRQQSDSG--VGERVVSQLLTELDGLEELEDVVVI 606

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           A TNRPD I+ AL RPGRLDR + +               VP    R +I    +   + 
Sbjct: 607 ATTNRPDLIDKALLRPGRLDRHVHV--------------PVPDEGARKKIFE--VHTRDK 650

Query: 611 SLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGH 669
            L D+ ++++L+  T G+VGAD+ A+  EA++   R +       ++  + G +   + H
Sbjct: 651 PLADAVDLDWLAGETEGYVGADIEAVTREASMAASREFINSVDPEEMADTIGNVRISKEH 710

Query: 670 SDTMLQDSDCS-----RNITESSRDCLDSASPCTSD 700
            +  L++ + S     R   E   +  D+A P   +
Sbjct: 711 FEHALEEVNPSVTPETREQYEEIEEQFDTAEPAQEE 746


>gi|384490589|gb|EIE81811.1| hypothetical protein RO3G_06516 [Rhizopus delemar RA 99-880]
          Length = 512

 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 143/261 (54%), Positives = 183/261 (70%), Gaps = 33/261 (12%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L + L D ++A  ++RPSAMRE++LEVPKV W D+GGQ ++K +L E+VEWP +H EAF+
Sbjct: 274  LAVNLQDMKEAMSEIRPSAMREIMLEVPKVYWSDIGGQADIKQRLKESVEWPLQHPEAFE 333

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R+G RPP G+L+FGPPGCSKTLMA+A+A+EAG NF+AVKGPEL SKWVGESEKAV     
Sbjct: 334  RLGIRPPKGVLLFGPPGCSKTLMAKALATEAGSNFIAVKGPELLSKWVGESEKAVHE--- 390

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESD-GVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
                        DEID L   RG   D G SV+DRV+SQLL ELDG+             
Sbjct: 391  ------------DEIDALTVKRGSSGDGGTSVADRVLSQLLNELDGI------------- 425

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACL--SEGC 979
              + +D ALLRPGR DR+LYVGPP+   R+EIF+I L+K+ C  DV+I E+A    SEGC
Sbjct: 426  --EPLDNALLRPGRIDRILYVGPPDYASRKEIFKIQLKKMACDEDVDIEEIATKVSSEGC 483

Query: 980  TGADISLICREAAISAIEENL 1000
            +GA+   IC+EAA+ A+EEN+
Sbjct: 484  SGAEAVAICQEAALIAMEENV 504



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 105/250 (42%), Positives = 160/250 (64%), Gaps = 17/250 (6%)

Query: 399 FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGK 457
            + V+AT +     +GGLSK+  +++++I +      L +  GL+P +G+LL GPPGTGK
Sbjct: 31  IKEVKAT-KTSYESIGGLSKQIQVVREMIETPLKNPELFTKYGLKPPRGLLLFGPPGTGK 89

Query: 458 TSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAP 517
           T +AR  A ++G     VNGPE++S+ YGE+EQ L ++F+ A+  AP ++FIDE+D++  
Sbjct: 90  TLIARAAAEEAGAYSIIVNGPEIISKFYGETEQKLRDIFEEAAARAPTIIFIDEIDSLCS 149

Query: 518 ARKDGGEELSQRMVATLLNLMDGV-CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
            R +   EL +R+V TLL LMDG     + V+VI ATNRP++++ ALRRPGR DRE+EI 
Sbjct: 150 KRDEAPSELEKRIVTTLLTLMDGTKTEHNRVVVIGATNRPNALDEALRRPGRFDREVEI- 208

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                         +P+   R  I   ++S + +SL D E+E L+  +HG+VGAD+AA+C
Sbjct: 209 -------------GIPNSESRFSIFKTIMSKIPYSLTDRELEQLAQKSHGYVGADIAAVC 255

Query: 637 NEAALVCLRR 646
            EA L C++R
Sbjct: 256 REAGLRCIKR 265



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/270 (41%), Positives = 164/270 (60%), Gaps = 10/270 (3%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            V  S+++EV  +  K  +E +GG  +    + E +E P K+ E F + G +PP G+L+FG
Sbjct: 26   VSSSSIKEV--KATKTSYESIGGLSKQIQVVREMIETPLKNPELFTKYGLKPPRGLLLFG 83

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+ARA A EAG   + V GPE+ SK+ GE+E+ +R +F +A A AP+IIF DE
Sbjct: 84   PPGTGKTLIARAAAEEAGAYSIIVNGPEIISKFYGETEQKLRDIFEEAAARAPTIIFIDE 143

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN-VTVIAATNRPDKIDPALLRPGR 935
            ID L + R +      +  R+++ LL  +DG     N V VI ATNRP+ +D AL RPGR
Sbjct: 144  IDSLCSKRDEAPS--ELEKRIVTTLLTLMDGTKTEHNRVVVIGATNRPNALDEALRRPGR 201

Query: 936  FDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAIS 994
            FDR + +G PN   R  IF+  + KIP S +D  + +LA  S G  GADI+ +CREA + 
Sbjct: 202  FDREVEIGIPNSESRFSIFKTIMSKIPYSLTDRELEQLAQKSHGYVGADIAAVCREAGLR 261

Query: 995  AIEE----NLDASRITMQHLKTAIRHVQPS 1020
             I+     +++   + +Q +K A+  ++PS
Sbjct: 262  CIKRCNAMSVNNLAVNLQDMKEAMSEIRPS 291



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 106/213 (49%), Gaps = 54/213 (25%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+RP KGVLL GPPG  KT +A+  A ++G N   V GPE++S+  GESE+A+HE    
Sbjct: 335 LGIRPPKGVLLFGPPGCSKTLMAKALATEAGSNFIAVKGPELLSKWVGESEKAVHE---- 390

Query: 499 ASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
                      DE+DA+   R    DGG  ++ R+++ LLN +DG+              
Sbjct: 391 -----------DEIDALTVKRGSSGDGGTSVADRVLSQLLNELDGI-------------- 425

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            + ++ AL RPGR+DR           +L   P   P  A R EI    L  M     D 
Sbjct: 426 -EPLDNALLRPGRIDR-----------ILYVGP---PDYASRKEIFKIQLKKM---ACDE 467

Query: 616 EVEYLSMAT----HGFVGADLAALCNEAALVCL 644
           +V+   +AT     G  GA+  A+C EAAL+ +
Sbjct: 468 DVDIEEIATKVSSEGCSGAEAVAICQEAALIAM 500


>gi|448611873|ref|ZP_21662303.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax mucosum
            ATCC BAA-1512]
 gi|445742634|gb|ELZ94128.1| AAA-type ATPase (transitional ATPase-like protein) [Haloferax mucosum
            ATCC BAA-1512]
          Length = 754

 Score =  286 bits (731), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 140/290 (48%), Positives = 194/290 (66%), Gaps = 12/290 (4%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF++A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F+
Sbjct: 431  LRVTESDFKEALKSIEPSALREVFVEVPDVTWEDVGGLGTTKERLRETIQWPLEYPEVFQ 490

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F 
Sbjct: 491  TMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVFK 550

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR NAP+++FFDEID +AA RG++S    V++RV+SQLL ELDGL    +V VIA TNR
Sbjct: 551  KARENAPTVVFFDEIDSIAAERGRDSTSSGVTERVVSQLLTELDGLEALEDVVVIATTNR 610

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR ++V  P+E  R  I  +H R  P + DV +  +A  +EG  GA
Sbjct: 611  PDLIDSALLRPGRLDRHVHVPVPDEDARRAILDVHTRSKPLADDVELDAIASKTEGYVGA 670

Query: 983  DISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            DI  + REA+++A            IEE++   R+TM+H + A+  + PS
Sbjct: 671  DIEALAREASMNASREFIQSVTKEEIEESVGNVRVTMEHFENALDEIGPS 720



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 164/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DE+D +A  RG+   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDELDSIAPKRGEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDTALRRGGRFDREIEIGVPDRDG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + D+++   A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEILQVHTRNMPLTDDIDLDAYADSTHGFVGADLESLAKESAMHALRRIRPQLDLDAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      R+T    K A++ ++PS
Sbjct: 423  IDAEVLETLRVTESDFKEALKSIEPS 448



 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/235 (45%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A++++PA+VFIDELD+IAP R + G ++ +R+V
Sbjct: 252 FHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDELDSIAPKRGEAGGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLDERGEVVVIGATNRVDAIDTALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL      M  +  D +++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 358 PDRDGRKEILQVHTRNMPLT-DDIDLDAYADSTHGFVGADLESLAKESAMHALRR 411



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 137/246 (55%), Gaps = 25/246 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             ++ +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + EV
Sbjct: 489 FQTMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREV 548

Query: 496 FDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A ++AP VVF DE+D+IA    R      +++R+V+ LL  +DG+   + V+VIA T
Sbjct: 549 FKKARENAPTVVFFDEIDSIAAERGRDSTSSGVTERVVSQLLTELDGLEALEDVVVIATT 608

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEIL--HALLSGMEHS 611
           NRPD I+ AL RPGRLDR + +               VP    R  IL  H     +   
Sbjct: 609 NRPDLIDSALLRPGRLDRHVHV--------------PVPDEDARRAILDVHTRSKPLAD- 653

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLFEFE 667
             D E++ ++  T G+VGAD+ AL  EA++   R + +  T  ++  S G    T+  FE
Sbjct: 654 --DVELDAIASKTEGYVGADIEALAREASMNASREFIQSVTKEEIEESVGNVRVTMEHFE 711

Query: 668 GHSDTM 673
              D +
Sbjct: 712 NALDEI 717


>gi|429193588|ref|YP_007179266.1| AAA ATPase [Natronobacterium gregoryi SP2]
 gi|448326385|ref|ZP_21515749.1| ATPase AAA [Natronobacterium gregoryi SP2]
 gi|429137806|gb|AFZ74817.1| AAA family ATPase, CDC48 subfamily [Natronobacterium gregoryi SP2]
 gi|445612425|gb|ELY66150.1| ATPase AAA [Natronobacterium gregoryi SP2]
          Length = 753

 Score =  285 bits (730), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 137/284 (48%), Positives = 192/284 (67%), Gaps = 12/284 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG  + K +L E ++WP  + + F+++    
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWNDVGGLDDTKERLRETIQWPLDYPQVFEQMDMEA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREIFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V V+A TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGRGQTDSGVGERVVSQLLTELDGLEELEDVVVVATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R++IF +H R  P +  V++  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEDARKKIFEVHTRDKPLAEAVDLDWLAAETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            REA+++A            I + +D  RI+ +H + A+  V PS
Sbjct: 678  REASMAASREFITSVDPEEIGDTVDNVRISKEHFENALEEVGPS 721



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 167/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEIGVPDKE 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------E 998
             R+EI ++H R +P    V++   A  + G  GAD+  + RE A++A+           +
Sbjct: 363  GRKEILQVHTRGMPLEESVDLEHYATNTHGFVGADLESLAREGAMNALRRIRPDLDLESQ 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T    K A++ +QPS
Sbjct: 423  EIDADVLESLQVTEDDFKEALKGIQPS 449



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/237 (46%), Positives = 150/237 (63%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGM--EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  E S+   ++E+ +  THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGMPLEESV---DLEHYATNTHGFVGADLESLAREGAMNALRR 412



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 138/241 (57%), Gaps = 20/241 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            + +   KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLDDTKERLRETIQWPLDYPQVFEQMDMEAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LS 527
            N  ++ GPE++++  GESE+ + E+F+ A  +AP V+F DE+D+IA  R  G  +  + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREIFEKARSNAPTVIFFDEIDSIAGERGRGQTDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+V+A TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVVATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP    R +I    +   +  L ++ ++++L+  T G+VGAD+ A+C EA++   R 
Sbjct: 632 --PVPDEDARKKIFE--VHTRDKPLAEAVDLDWLAAETEGYVGADIEAVCREASMAASRE 687

Query: 647 Y 647
           +
Sbjct: 688 F 688


>gi|145488414|ref|XP_001430211.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124397307|emb|CAK62813.1| unnamed protein product [Paramecium tetraurelia]
          Length = 617

 Score =  285 bits (730), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 134/292 (45%), Positives = 197/292 (67%), Gaps = 5/292 (1%)

Query: 748  VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 807
            +   ++  K+ PS +R+++ +VPKV W D+GG  ++K ++ + VEWP K+ E FK++G  
Sbjct: 329  IKLRQSLQKLNPSGIRDLLADVPKVDWNDIGGYEDIKQEIKKVVEWPLKYPEQFKKLGIT 388

Query: 808  PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 867
            P  GIL++GPPGCSKTL+ARA+ ++  L F+AVKGPE+FSK+VG+SEK VR +F KAR  
Sbjct: 389  PSKGILLYGPPGCSKTLLARALCTQCNLAFIAVKGPEIFSKYVGDSEKTVREIFKKARIC 448

Query: 868  APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            APS++FFDEID +A  R   +D   VSDRV+ QLL E+DG     NV +IAATNRP  ID
Sbjct: 449  APSVLFFDEIDAIAPQRQGSTD---VSDRVLIQLLTEIDGFESLKNVIIIAATNRPASID 505

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN--IRELACLSEGCTGADIS 985
             ALLRPGRFD L++V  P+   R+ IF ++L+K+  + DV   ++ L   + G TGA+I 
Sbjct: 506  KALLRPGRFDHLVFVDVPDREGRKAIFEVNLKKMKVNDDVTQGLQTLIDKTMGYTGAEIC 565

Query: 986  LICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVH 1037
             ICREA ++A+  ++D   I ++  + A+  V+P+  H  +    +F +LV 
Sbjct: 566  QICREAGLNALNRSIDNEFIELKDFEMALSKVKPNVTHEDRLQFLQFAKLVQ 617



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 16/212 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P+KG+LL+GPPG  KT LAR       +    V GPE+ S+  G+SE+ + E+
Sbjct: 382 FKKLGITPSKGILLYGPPGCSKTLLARALCTQCNLAFIAVKGPEIFSKYVGDSEKTVREI 441

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A   AP+V+F DE+DAIAP R+ G  ++S R++  LL  +DG      V++IAATNR
Sbjct: 442 FKKARICAPSVLFFDEIDAIAPQRQ-GSTDVSDRVLIQLLTEIDGFESLKNVIIIAATNR 500

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME-HSLLD 614
           P SI+ AL RPGR D  + +D              VP    R  I    L  M+ +  + 
Sbjct: 501 PASIDKALLRPGRFDHLVFVD--------------VPDREGRKAIFEVNLKKMKVNDDVT 546

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             ++ L   T G+ GA++  +C EA L  L R
Sbjct: 547 QGLQTLIDKTMGYTGAEICQICREAGLNALNR 578



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 46/244 (18%)

Query: 399 FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           F  +QA +EQ+I   G  S E                +S + L   KGVL+ G  GTGKT
Sbjct: 123 FNELQAIIEQNI---GEQSNE----------------ISLMNLPLIKGVLISGQTGTGKT 163

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
           ++ ++         +    P ++S N+ ++     +     SQ    ++ ID+L ++   
Sbjct: 164 TILQMLRDK-----YVEYKPVLISINHLDANNKELQQLLEISQQRNNLILIDDLSSLT-- 216

Query: 519 RKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
                +E  Q +  +L  + D V +    L+IA       I   LRR GR ++EI I+  
Sbjct: 217 -----DENMQTVKPSLFKIFDNV-QNKKSLIIATITSIKDIPDNLRRSGRFEKEIIIEQ- 269

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNE 638
                        P+   R++I+    +     +    ++ +S    GF   D+  L  E
Sbjct: 270 -------------PNHEIRVDIMINEFTKQNIEIEKEVLKEISYQMSGFTVNDIRCLVRE 316

Query: 639 AALV 642
             L+
Sbjct: 317 FYLL 320


>gi|448111580|ref|XP_004201875.1| Piso0_001338 [Millerozyma farinosa CBS 7064]
 gi|359464864|emb|CCE88569.1| Piso0_001338 [Millerozyma farinosa CBS 7064]
          Length = 797

 Score =  285 bits (729), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 145/306 (47%), Positives = 212/306 (69%), Gaps = 15/306 (4%)

Query: 736  MSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQ 795
            +S+K     +   D ++A  +VRPSAMREV+LE+PKV W D+GGQ E+K +L+E V+ P 
Sbjct: 494  LSDKTNETLMTYSDMDEALTEVRPSAMREVLLEMPKVYWSDIGGQTELKRKLVEVVQLPL 553

Query: 796  KHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEK 855
            +  + F ++G + P G+L++GPPGCSKTL A+A+A+E+GLNFLAVKGPE+ +K+VGESE+
Sbjct: 554  EAADTFHKLGVQAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEILNKYVGESER 613

Query: 856  AVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVT 915
             +R +F KAR  APSIIFFDEID +++ R  ES   S +  V++ LL E+DG+ +   V 
Sbjct: 614  TIREIFRKARTAAPSIIFFDEIDAISSDR--ESASTSAAQNVLTSLLNEIDGVEELKGVI 671

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD-----VNIR 970
            ++AATNRP +ID ALLRPGR DR +YVGPP+   R +I    LRK   S D     ++  
Sbjct: 672  ILAATNRPTEIDSALLRPGRLDRHIYVGPPDYEARLDI----LRKKCASFDLEEEELSFE 727

Query: 971  ELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYK 1026
            ELA  +EGC+GA++SL+C+EA ++AI E+  A R+  +H + A+    R +    ++ YK
Sbjct: 728  ELARWTEGCSGAEVSLLCQEAGLAAIMEDKAAQRVQKKHFEFALKGISRGITSEMLNYYK 787

Query: 1027 ELSAKF 1032
            E +++F
Sbjct: 788  EFASRF 793



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 151/242 (62%), Gaps = 21/242 (8%)

Query: 411 SKLGGLSKEYAILK-DIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S LGGL+K+   L+  I +  +     S  G+ P +G+LL GPPGTGKT L R  A++  
Sbjct: 266 SDLGGLAKQVKTLRLAIDLPLNNPKLFSEFGISPPRGILLQGPPGTGKTMLLRCIAYEVD 325

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            ++ TV+GP +VS+  GE+E A+ ++F  A +  P+++ +DE+D++AP+R  +D GE  S
Sbjct: 326 AHILTVSGPSIVSKYMGEAENAIRDIFLEAKRFEPSIIILDEIDSLAPSRNSEDSGEAES 385

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            R++AT+L ++D +  ++ VL+I ATNRP+S++ +LRRPGR D+EIEI            
Sbjct: 386 -RVIATILTMIDSLNASNRVLIIGATNRPNSVDSSLRRPGRFDQEIEI------------ 432

Query: 588 PAAVPSPAQRLEILHAL---LSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
              +P    R +IL      ++  +++L + E++ ++  THG+VGADL +LC EA +  +
Sbjct: 433 --GIPDVEARFDILQKQFRKINKAKYNLKEDEIKLIASKTHGYVGADLISLCREAIIKAV 490

Query: 645 RR 646
            R
Sbjct: 491 TR 492



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 155/273 (56%), Gaps = 22/273 (8%)

Query: 767  LEVPKVKWE---------DVGG-QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            +++P +K+          D+GG  ++VKT L  A++ P  + + F   G  PP GIL+ G
Sbjct: 249  IDLPYIKYNRLPRNLSFSDLGGLAKQVKT-LRLAIDLPLNNPKLFSEFGISPPRGILLQG 307

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KT++ R +A E   + L V GP + SK++GE+E A+R +F +A+   PSII  DE
Sbjct: 308  PPGTGKTMLLRCIAYEVDAHILTVSGPSIVSKYMGEAENAIRDIFLEAKRFEPSIIILDE 367

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID LA  R  E  G + S RV++ +L  +D L+    V +I ATNRP+ +D +L RPGRF
Sbjct: 368  IDSLAPSRNSEDSGEAES-RVIATILTMIDSLNASNRVLIIGATNRPNSVDSSLRRPGRF 426

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRE-----LACLSEGCTGADISLICREA 991
            D+ + +G P+   R +I +   RKI   +  N++E     +A  + G  GAD+  +CREA
Sbjct: 427  DQEIEIGIPDVEARFDILQKQFRKI-NKAKYNLKEDEIKLIASKTHGYVGADLISLCREA 485

Query: 992  AISAIEENL----DASRITMQHLKTAIRHVQPS 1020
             I A+   L    + + +T   +  A+  V+PS
Sbjct: 486  IIKAVTRGLSDKTNETLMTYSDMDEALTEVRPS 518



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 120/210 (57%), Gaps = 14/210 (6%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T   LG++  KGVLL+GPPG  KT  A+  A +SG+N   V GPE++++  GESE+ + E
Sbjct: 558 TFHKLGVQAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEILNKYVGESERTIRE 617

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           +F  A  +AP+++F DE+DAI+  R+      +Q ++ +LLN +DGV    GV+++AATN
Sbjct: 618 IFRKARTAAPSIIFFDEIDAISSDRESASTSAAQNVLTSLLNEIDGVEELKGVIILAATN 677

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RP  I+ AL RPGRLDR I +                P    RL+IL    +  +    +
Sbjct: 678 RPTEIDSALLRPGRLDRHIYV--------------GPPDYEARLDILRKKCASFDLEEEE 723

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCL 644
              E L+  T G  GA+++ LC EA L  +
Sbjct: 724 LSFEELARWTEGCSGAEVSLLCQEAGLAAI 753


>gi|257076346|ref|ZP_05570707.1| cell division cycle protein 48 [Ferroplasma acidarmanus fer1]
          Length = 744

 Score =  285 bits (729), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 137/305 (44%), Positives = 203/305 (66%), Gaps = 6/305 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   + PS++REV +EVP +KW D+GG   +K++L EAVE P  + + F R+G R 
Sbjct: 441  DFMEALKTIEPSSLREVTVEVPNIKWNDIGGLEALKSELREAVELPLLNPDVFSRLGIRA 500

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G L++GPPG  KTL+A+AVA+E+  NF++VKGPE+ SKWVG+SEKAVR +F KA+  +
Sbjct: 501  PKGFLLYGPPGTGKTLLAKAVANESNANFISVKGPEVLSKWVGDSEKAVREIFKKAKQVS 560

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+IIF DEID +A  RG   D   V++R+++QLL  +DG+     V VIAATNRPD IDP
Sbjct: 561  PAIIFMDEIDSIAPRRGTSMDS-GVTERIVNQLLTSMDGIEVLKGVVVIAATNRPDIIDP 619

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLR GRFD+++Y+ PP E  R +I  +H RK+P + DV+++++A  ++G  GAD+  +C
Sbjct: 620  ALLRAGRFDKIIYIPPPEEEGRLKILEVHTRKMPLAKDVDLKDIARKTDGYVGADLENLC 679

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHSNAEADE 1044
            REA + A   N +A+ +       A++ ++PS        Y +L+A   R +    + ++
Sbjct: 680  REAGMMAYRNNPEATEVNQDAFIKAMKTIRPSIDKNVTKFYSDLAATMGRDISEKKKTED 739

Query: 1045 SG-YQ 1048
             G YQ
Sbjct: 740  LGLYQ 744



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 183/312 (58%), Gaps = 21/312 (6%)

Query: 731  SGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEA 790
            +G +F   K    K+ +   E+ R+++R     EV+ EV KV +ED+GG  +   ++ E 
Sbjct: 146  TGLLFKVIKTIPSKIPVEVSEETRVEIREDPASEVLEEVTKVSYEDIGGLSDQLGKIREI 205

Query: 791  VEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWV 850
            +E P KH E F+R+G  PP G+L+ GPPG  KTL+A+AVA+E+G NF A+ GPE+ SK+ 
Sbjct: 206  IELPLKHPELFERLGITPPKGVLLNGPPGTGKTLIAKAVANESGANFFAINGPEIMSKYY 265

Query: 851  GESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ 910
            G+SE+ +R +F KA  + PSIIF DEID +A  R  E     V  RV++QLL  +DGL  
Sbjct: 266  GQSEQKLREIFQKADESEPSIIFIDEIDSIAPKR--EDVQGEVERRVVAQLLTLMDGLKD 323

Query: 911  RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN-- 968
            R +V VI ATNR D +DPAL RPGRFDR + +G P++  R EI  IH R +P   D    
Sbjct: 324  RGHVIVIGATNRLDAVDPALRRPGRFDREIVIGVPDKKGRMEILTIHTRGMPLGMDDEKE 383

Query: 969  ---IRELACLSEGCTGADISLICREAAISAIE--------------ENLDASRITMQHLK 1011
                  +A ++ G  GAD++ + RE+A++A+               E L+   +T     
Sbjct: 384  SEFFSRIADITYGFVGADLAALTRESAMNALRRYLPEIDLDKPIPTEVLEKMIVTEDDFM 443

Query: 1012 TAIRHVQPSEIH 1023
             A++ ++PS + 
Sbjct: 444  EALKTIEPSSLR 455



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/240 (47%), Positives = 153/240 (63%), Gaps = 19/240 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS +   +++II +          LG+ P KGVLL+GPPGTGKT +A+  A++SG N
Sbjct: 192 IGGLSDQLGKIREIIELPLKHPELFERLGITPPKGVLLNGPPGTGKTLIAKAVANESGAN 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+ YG+SEQ L E+F  A +S P+++FIDE+D+IAP R+D   E+ +R+V
Sbjct: 252 FFAINGPEIMSKYYGQSEQKLREIFQKADESEPSIIFIDEIDSIAPKREDVQGEVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNR D+++PALRRPGR DREI I               V
Sbjct: 312 AQLLTLMDGLKDRGHVIVIGATNRLDAVDPALRRPGRFDREIVI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLD-SEVEYLSM---ATHGFVGADLAALCNEAALVCLRRY 647
           P    R+EIL     GM   + D  E E+ S     T+GFVGADLAAL  E+A+  LRRY
Sbjct: 358 PDKKGRMEILTIHTRGMPLGMDDEKESEFFSRIADITYGFVGADLAALTRESAMNALRRY 417



 Score =  167 bits (424), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/217 (43%), Positives = 132/217 (60%), Gaps = 24/217 (11%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
              S LG+R  KG LL+GPPGTGKT LA+  A++S  N  +V GPEV+S+  G+SE+A+ 
Sbjct: 491 DVFSRLGIRAPKGFLLYGPPGTGKTLLAKAVANESNANFISVKGPEVLSKWVGDSEKAVR 550

Query: 494 EVFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           E+F  A Q +PA++F+DE+D+IAP R    D G  +++R+V  LL  MDG+    GV+VI
Sbjct: 551 EIFKKAKQVSPAIIFMDEIDSIAPRRGTSMDSG--VTERIVNQLLTSMDGIEVLKGVVVI 608

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGM 608
           AATNRPD I+PAL R GR D+ I I                P P +  RL+IL      M
Sbjct: 609 AATNRPDIIDPALLRAGRFDKIIYI----------------PPPEEEGRLKILEVHTRKM 652

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             +  D +++ ++  T G+VGADL  LC EA ++  R
Sbjct: 653 PLA-KDVDLKDIARKTDGYVGADLENLCREAGMMAYR 688


>gi|429327183|gb|AFZ78943.1| ATPase, AAA family domain containing protein [Babesia equi]
          Length = 810

 Score =  285 bits (729), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 145/309 (46%), Positives = 207/309 (66%), Gaps = 29/309 (9%)

Query: 747  LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
            L DF++A    RPSA++E+ +++P VKWED+GG   VK  L E VE+P+ +   ++ +  
Sbjct: 500  LDDFKEAIKITRPSALKELYIQIPNVKWEDIGGYETVKLSLKECVEYPRTYGHFYEALHI 559

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
            +PP GIL++GPPGCSKTLMA+AVA+E+ +NF++VKGPELFSKWVGESE+A+R LF KAR 
Sbjct: 560  QPPRGILLYGPPGCSKTLMAKAVATESHMNFISVKGPELFSKWVGESERAIRQLFEKART 619

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
            N+P IIFFDEID + AI  ++S+   V  RV+SQLL E+DG++    V VI ATNRPD +
Sbjct: 620  NSPCIIFFDEIDSV-AINREDSESTGVGTRVLSQLLNEMDGINALKQVIVIGATNRPDML 678

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIR----ELACLSEGCTGA 982
            DPAL+RPGR DRL+YV  P+   R  IF+I+L ++   SD N+     ELA  +E  +GA
Sbjct: 679  DPALIRPGRLDRLVYVPLPDFDARVSIFKIYLGRL--LSDFNVDEVSLELAEKTENYSGA 736

Query: 983  DISLICREAAISAIEENL------------------DASRITMQHLKTAIRHVQP----S 1020
            +I+L+C+E+A+ A+ E++                  +A  ++  HL   + H++P    S
Sbjct: 737  EIALLCKESAMCALREHIKLIDDNTSDSFERTGIRNNAFPVSKSHLIDTLSHIKPRTKKS 796

Query: 1021 EIHSYKELS 1029
             I  Y+E S
Sbjct: 797  TIRFYEEYS 805



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 131/228 (57%), Gaps = 18/228 (7%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
           +L ++P +G+LL+GPPG  KT +A+  A +S +N  +V GPE+ S+  GESE+A+ ++F+
Sbjct: 556 ALHIQPPRGILLYGPPGCSKTLMAKAVATESHMNFISVKGPELFSKWVGESERAIRQLFE 615

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEE-LSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
            A  ++P ++F DE+D++A  R+D     +  R+++ LLN MDG+     V+VI ATNRP
Sbjct: 616 KARTNSPCIIFFDEIDSVAINREDSESTGVGTRVLSQLLNEMDGINALKQVIVIGATNRP 675

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D ++PAL RPGRLDR + + +              P    R+ I    L  +       E
Sbjct: 676 DMLDPALIRPGRLDRLVYVPL--------------PDFDARVSIFKIYLGRLLSDFNVDE 721

Query: 617 VEY-LSMATHGFVGADLAALCNEAALVCLRRYSKI--QTSSDVLHSTG 661
           V   L+  T  + GA++A LC E+A+  LR + K+    +SD    TG
Sbjct: 722 VSLELAEKTENYSGAEIALLCKESAMCALREHIKLIDDNTSDSFERTG 769



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 142/272 (52%), Gaps = 33/272 (12%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
           L GL K+  ILK  +I   +     SLG+ P  G++L+GPPG+GKT LA+    D   +L
Sbjct: 249 LAGLKKQLEILKWHVIYPLIYDKYQSLGIYPPSGIILYGPPGSGKTLLAKSIEQDYK-SL 307

Query: 473 F-------------TVNGPEVVSQNYGESEQALHEVF---DSASQSAPAVVFIDELDAIA 516
           F             ++   +++S   G++E+ L+E+F   ++ S++   + FIDE+D + 
Sbjct: 308 FGITDDLCHEICFKSIKSSDLISSIVGKTEENLNELFKECENISKTKKCICFIDEIDILC 367

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
             R+ G +  ++R+V + LN MD +       +I  TN  +S++ ALRRPGR D EIEI 
Sbjct: 368 QKRETGNDT-NRRVVTSFLNNMDSIKGAINYTIIGMTNDINSMDLALRRPGRFDLEIEI- 425

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                         VP+   RLEIL  LLS + HSL   ++ Y++     FVGAD+ AL 
Sbjct: 426 -------------GVPTQDDRLEILKTLLSNINHSLTADKIHYINDFCQAFVGADIKALI 472

Query: 637 NEAALVCLRRY-SKIQTSSDVLHSTGTLFEFE 667
             A+   L R  + I+     + S  TL +F+
Sbjct: 473 ANASAAHLNRIKNSIENKETSVDSMVTLDDFK 504



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 32/268 (11%)

Query: 783  VKTQLMEAVEWPQKH---QEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAG----- 834
            +K QL E ++W   +    + ++ +G  PP+GI+++GPPG  KTL+A+++  +       
Sbjct: 252  LKKQL-EILKWHVIYPLIYDKYQSLGIYPPSGIILYGPPGSGKTLLAKSIEQDYKSLFGI 310

Query: 835  -------LNFLAVKGPELFSKWVGESEKAVRSLFAKAR---ANAPSIIFFDEIDGLAAIR 884
                   + F ++K  +L S  VG++E+ +  LF +          I F DEID L    
Sbjct: 311  TDDLCHEICFKSIKSSDLISSIVGKTEENLNELFKECENISKTKKCICFIDEIDILCQ-- 368

Query: 885  GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
             K   G   + RV++  L  +D +   +N T+I  TN  + +D AL RPGRFD  + +G 
Sbjct: 369  -KRETGNDTNRRVVTSFLNNMDSIKGAINYTIIGMTNDINSMDLALRRPGRFDLEIEIGV 427

Query: 945  PNETDREEIFRIHLRKIPCSSDVN-IRELACLSEGCTGADISLICREAAISAIE------ 997
            P + DR EI +  L  I  S   + I  +    +   GADI  +   A+ + +       
Sbjct: 428  PTQDDRLEILKTLLSNINHSLTADKIHYINDFCQAFVGADIKALIANASAAHLNRIKNSI 487

Query: 998  ENLDA---SRITMQHLKTAIRHVQPSEI 1022
            EN +    S +T+   K AI+  +PS +
Sbjct: 488  ENKETSVDSMVTLDDFKEAIKITRPSAL 515


>gi|220927298|ref|YP_002502600.1| ATPase AAA [Methylobacterium nodulans ORS 2060]
 gi|219951905|gb|ACL62297.1| AAA family ATPase, CDC48 subfamily [Methylobacterium nodulans ORS
            2060]
          Length = 757

 Score =  285 bits (729), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 139/272 (51%), Positives = 186/272 (68%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V+PSA+RE++++VP V WEDVGG  +V+T+L E VE P K+ EAF+RIG RP
Sbjct: 450  DFLNALKRVQPSALREIMIQVPNVGWEDVGGLGDVQTKLREGVELPLKNPEAFRRIGIRP 509

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G L+FGPPG  KTL+A+AVA EA  NF+A K  +L SKW GESE+ V  LFA+AR  A
Sbjct: 510  AKGFLLFGPPGTGKTLLAKAVAREASANFVATKSSDLLSKWYGESEQQVSRLFARARQVA 569

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IF DEID LA +RG      +V++RV++ +L E+DGL +   V VIAATNRP+ +DP
Sbjct: 570  PTVIFIDEIDSLAPVRGGGLGEPAVTERVVNTILAEMDGLEELQGVVVIAATNRPNLVDP 629

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+YV  PN   R  I  IH R +P + DV++ +LA  +   TGAD+  + 
Sbjct: 630  ALLRPGRFDELVYVPVPNVAGRRHILGIHTRGMPLAGDVDLDDLAARTVRFTGADLEDLT 689

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            R A + A+  NLDA  +T  H   A++  +PS
Sbjct: 690  RRAGLMALRANLDAREVTRAHFDAALQETRPS 721



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/266 (42%), Positives = 163/266 (61%), Gaps = 16/266 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG      Q+ E VE P +H E F+R+G  PP G+L++GPPG  KTL+ARAVA+
Sbjct: 201  VTYDDIGGLGSTVDQVREMVELPLRHPELFQRLGIDPPKGVLLYGPPGTGKTLLARAVAN 260

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E    F  + GPE+     GESE+ +R +F++A+ NAP+IIF DEID +A  R +E+ G 
Sbjct: 261  ETEAQFFHIAGPEIMGSQYGESEQRLRQIFSEAQRNAPAIIFIDEIDSIAPKR-EEARG- 318

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R+++QLL  +DGL  R N+ VI ATNR D ID AL RPGRFDR + +G P+E  R 
Sbjct: 319  EVERRIVAQLLTLMDGLEPRQNIVVIGATNRRDAIDEALRRPGRFDREIVIGVPDEPGRR 378

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            E+  IH R +P   +V++ E+A  + G  GAD++ + REAA+ A+               
Sbjct: 379  EVLTIHTRGMPLGENVDLDEIARTTYGFVGADLAALAREAAMDALRRVLPQINLKEGIPP 438

Query: 998  ENLDASRITMQHLKTAIRHVQPSEIH 1023
            E L+  ++  +    A++ VQPS + 
Sbjct: 439  EILETLQVCREDFLNALKRVQPSALR 464



 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/214 (47%), Positives = 134/214 (62%), Gaps = 21/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL+GPPGTGKT LAR  A+++    F + GPE++   YGESEQ L ++
Sbjct: 230 FQRLGIDPPKGVLLYGPPGTGKTLLARAVANETEAQFFHIAGPEIMGSQYGESEQRLRQI 289

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A ++APA++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     ++VI ATNR
Sbjct: 290 FSEAQRNAPAIIFIDEIDSIAPKREEARGEVERRIVAQLLTLMDGLEPRQNIVVIGATNR 349

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM---EHSL 612
            D+I+ ALRRPGR DREI I               VP    R E+L     GM   E+  
Sbjct: 350 RDAIDEALRRPGRFDREIVI--------------GVPDEPGRREVLTIHTRGMPLGENVD 395

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           LD     ++  T+GFVGADLAAL  EAA+  LRR
Sbjct: 396 LDE----IARTTYGFVGADLAALAREAAMDALRR 425



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 123/209 (58%), Gaps = 17/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+RP KG LL GPPGTGKT LA+  A ++  N       +++S+ YGESEQ +  +F  
Sbjct: 505 IGIRPAKGFLLFGPPGTGKTLLAKAVAREASANFVATKSSDLLSKWYGESEQQVSRLFAR 564

Query: 499 ASQSAPAVVFIDELDAIAPARKDG-GE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A Q AP V+FIDE+D++AP R  G GE  +++R+V T+L  MDG+    GV+VIAATNRP
Sbjct: 565 ARQVAPTVIFIDEIDSLAPVRGGGLGEPAVTERVVNTILAEMDGLEELQGVVVIAATNRP 624

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           + ++PAL RPGR D  + +               VP+ A R  IL     GM  +  D +
Sbjct: 625 NLVDPALLRPGRFDELVYV--------------PVPNVAGRRHILGIHTRGMPLA-GDVD 669

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           ++ L+  T  F GADL  L   A L+ LR
Sbjct: 670 LDDLAARTVRFTGADLEDLTRRAGLMALR 698


>gi|448639878|ref|ZP_21677026.1| cell division control protein 48/AAA family ATPase [Haloarcula
            sinaiiensis ATCC 33800]
 gi|445762405|gb|EMA13626.1| cell division control protein 48/AAA family ATPase [Haloarcula
            sinaiiensis ATCC 33800]
          Length = 757

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 139/308 (45%), Positives = 198/308 (64%), Gaps = 16/308 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF +A   + PSA+REV +EVP V W+ VGG  + K +L E ++WP ++++ F+
Sbjct: 434  LEISDTDFREAMKGIEPSALREVFVEVPDVTWDSVGGLEDTKERLRETIQWPLEYEDVFE 493

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +      G+LM+GPPG  KTL+A+AVA+EA  NF++VKGPEL +K+VGESEK VR +F+
Sbjct: 494  SMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKFVGESEKGVREVFS 553

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR NAP+++FFDEID +A  RG  +    V +RV+SQLL ELDG+    NV V+A TNR
Sbjct: 554  KARENAPTVVFFDEIDSIAGERGGGTTDSGVGERVVSQLLTELDGIEDMENVVVVATTNR 613

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR ++V  P+E  R  IF++H R  P +  V++ ELA  ++G  GA
Sbjct: 614  PDLIDDALLRPGRLDRHVHVPVPDEEARHAIFQVHTRDKPLADGVDLDELASRTDGYVGA 673

Query: 983  DISLICREAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEIHS----YK 1026
            DI  + REA+++A  E +++             R+TM H + A+  V PS        Y 
Sbjct: 674  DIEAVAREASMAATREFINSVDPEEIGDSVSNVRVTMDHFEHALEEVGPSVTEETRERYD 733

Query: 1027 ELSAKFQR 1034
            E+  +F R
Sbjct: 734  EIEQRFDR 741



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 105/229 (45%), Positives = 153/229 (66%), Gaps = 2/229 (0%)

Query: 768 EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
           + P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+
Sbjct: 186 DTPDVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAK 245

Query: 828 AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
           AVA+E    F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DEID +A  RG E
Sbjct: 246 AVANEIDAYFTTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKRG-E 304

Query: 888 SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
           + G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P++
Sbjct: 305 TQG-DVERRVVAQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEIGVPDK 363

Query: 948 TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
             R+EI ++H R +P + ++NI   A  + G  GAD++ + +E+A++A+
Sbjct: 364 EGRKEILQVHTRGMPLAEEINIENYAENTHGFVGADLATLTKESAMNAL 412



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 148/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 195 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAY 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FTTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKRGETQGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  +  +  +E  +  THGFVGADLA L  E+A+  LRR
Sbjct: 361 PDKEGRKEILQVHTRGMPLA-EEINIENYAENTHGFVGADLATLTKESAMNALRR 414



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 33/305 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I      +    S+ L   KGVL++GPPGTGKT LA+  A+++  N
Sbjct: 468 VGGLEDTKERLRETIQWPLEYEDVFESMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSN 527

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             +V GPE++++  GESE+ + EVF  A ++AP VVF DE+D+IA  R  G  +  + +R
Sbjct: 528 FISVKGPELLNKFVGESEKGVREVFSKARENAPTVVFFDEIDSIAGERGGGTTDSGVGER 587

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+V+A TNRPD I+ AL RPGRLDR +                
Sbjct: 588 VVSQLLTELDGIEDMENVVVVATTNRPDLIDDALLRPGRLDRHVH--------------- 632

Query: 590 AVPSPAQRLEILHALLS--GMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            VP P +  E  HA+      +  L D  +++ L+  T G+VGAD+ A+  EA++   R 
Sbjct: 633 -VPVPDE--EARHAIFQVHTRDKPLADGVDLDELASRTDGYVGADIEAVAREASMAATRE 689

Query: 647 YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD-------CLDSASPCTS 699
           +       ++  S   +     H +  L++   S  +TE +R+         D A P  +
Sbjct: 690 FINSVDPEEIGDSVSNVRVTMDHFEHALEEVGPS--VTEETRERYDEIEQRFDRAEPGVT 747

Query: 700 DLPTS 704
           D  T+
Sbjct: 748 DESTA 752


>gi|399576643|ref|ZP_10770398.1| ATPase AAA [Halogranum salarium B-1]
 gi|399238087|gb|EJN59016.1| ATPase AAA [Halogranum salarium B-1]
          Length = 754

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 142/315 (45%), Positives = 205/315 (65%), Gaps = 19/315 (6%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F+++    
Sbjct: 438  DFKEALKGIEPSALREVFVEVPDVTWEDVGGLEGTKERLRETIQWPLEYPEVFQQMDMEA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+L++GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR NA
Sbjct: 498  AKGVLLYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVFKKARENA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  RG+ S+   VS+RV+SQLL ELDGL    +V VIA TNRPD ID 
Sbjct: 558  PTVVFFDEIDSIATERGRNSNDSGVSERVVSQLLTELDGLESLEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R +I  +H +  P +  V++ +LA  +EG  GAD+  + 
Sbjct: 618  ALLRPGRLDRHVHVPVPDEDGRRKILEVHTQHKPLADSVDLDKLARRTEGYVGADLEALA 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A            + E++   R+TM H + A+  VQPS        Y+E+  +F
Sbjct: 678  REASMTASREFIRSVSREEVTESIGNVRVTMDHFEQALDEVQPSVTEETRQRYEEIEERF 737

Query: 1033 QRLVHSNAEADESGY 1047
            ++   S+   +E  Y
Sbjct: 738  KK---SDVTKEEGEY 749



 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 164/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P + +ED+GG      Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 186  PDITYEDIGGLDRELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 245

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DE+D +AA R +   
Sbjct: 246  ANEIDASFHTISGPEIMSKYYGESEEQLREVFEEATENAPAIVFMDELDSIAAKRSEA-- 303

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P+   
Sbjct: 304  GGDVERRVVAQLLSLMDGLEERGQVVVIGATNRVDVIDPALRRGGRFDREIEIGVPDRDG 363

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R+EI ++H R +P S D+++   A  + G  GAD+  + +E A++A+             
Sbjct: 364  RKEILQVHTRNMPLSDDIDLDMYADNTHGFVGADLESLAKEGAMTALRRIRPDIDLEADE 423

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L++ ++T    K A++ ++PS
Sbjct: 424  IDAEVLESLQVTEDDFKEALKGIEPS 449



 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/235 (45%), Positives = 148/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDRELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A+++APA+VF+DELD+IA  R + G ++ +R+V
Sbjct: 253 FHTISGPEIMSKYYGESEEQLREVFEEATENAPAIVFMDELDSIAAKRSEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGQVVVIGATNRVDVIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL      M  S  D +++  +  THGFVGADL +L  E A+  LRR
Sbjct: 359 PDRDGRKEILQVHTRNMPLS-DDIDLDMYADNTHGFVGADLESLAKEGAMTALRR 412



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/259 (37%), Positives = 145/259 (55%), Gaps = 25/259 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + +   KGVLL+GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 489 VFQQMDMEAAKGVLLYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 548

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           VF  A ++AP VVF DE+D+IA  R     D G  +S+R+V+ LL  +DG+   + V+VI
Sbjct: 549 VFKKARENAPTVVFFDEIDSIATERGRNSNDSG--VSERVVSQLLTELDGLESLEDVVVI 606

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           A TNRPD I+ AL RPGRLDR + +               VP    R +IL   +     
Sbjct: 607 ATTNRPDLIDSALLRPGRLDRHVHV--------------PVPDEDGRRKILE--VHTQHK 650

Query: 611 SLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGH 669
            L DS +++ L+  T G+VGADL AL  EA++   R + +  +  +V  S G +     H
Sbjct: 651 PLADSVDLDKLARRTEGYVGADLEALAREASMTASREFIRSVSREEVTESIGNVRVTMDH 710

Query: 670 SDTMLQDSDCSRNITESSR 688
            +  L +   S  +TE +R
Sbjct: 711 FEQALDEVQPS--VTEETR 727


>gi|290558951|gb|EFD92336.1| AAA family ATPase, CDC48 subfamily [Candidatus Parvarchaeum
            acidophilus ARMAN-5]
 gi|290559274|gb|EFD92611.1| AAA family ATPase, CDC48 subfamily [Candidatus Parvarchaeum
            acidophilus ARMAN-5]
          Length = 764

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 139/296 (46%), Positives = 203/296 (68%), Gaps = 7/296 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L + + DF +A   VRPSAMREV++E P V W DVGG  EVK  L EA++WP KH ++F+
Sbjct: 456  LTVTMDDFREALRFVRPSAMREVLVERPSVGWNDVGGLGEVKDHLKEAIDWPIKHPDSFR 515

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +IG  PP GIL+FGPPG  KTL+A+AVA E   NF+A+KGPE+++K+VGESEK VR +F 
Sbjct: 516  KIGITPPKGILLFGPPGTGKTLLAKAVAHETESNFIAIKGPEIYNKYVGESEKRVREIFD 575

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  +PSIIF DE+D +A+ R    +G + +++V++QLL ELDG+    NV VI ATNR
Sbjct: 576  KARQVSPSIIFIDELDSIASSRSN-YEGNNSAEQVVNQLLTELDGIEPLKNVIVIGATNR 634

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN--IRELACLSEGCT 980
             DK+D A+LR GRFD +++V PP+E  R+EI ++++ K+P   D    I  L   +EG  
Sbjct: 635  IDKVDSAILRTGRFDNIVFVPPPDEAGRKEILKVYIDKMPIEGDKEELINFLVKKTEGYV 694

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            G+DI  + +EA ++A+  ++ A+++T    + A+  V+PS    EI  Y++++ K 
Sbjct: 695  GSDIERLTKEAGMNALRNDISATKVTKDDFEKALELVRPSLSQDEIKKYEDMAKKL 750



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 125/265 (47%), Positives = 168/265 (63%), Gaps = 18/265 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +EDVGG ++  +++ E VE P KH E F R+G  PP G+L++GPPG  KTL+ARAVA 
Sbjct: 211  VSYEDVGGLKDEVSKIREMVEIPLKHPEIFMRLGVTPPRGVLLYGPPGAGKTLLARAVAD 270

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F+ + GPE+ SKWVG++EK +R +F  A  NAPSIIF DEID +A  R +ES G 
Sbjct: 271  ESDAHFITINGPEVMSKWVGDAEKKLREIFDDAEKNAPSIIFIDEIDAIATKR-EESIG- 328

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV+SQLL  +DGL  R  V VIAATNRP+ IDPAL RPGRFDR +  G PNE  R+
Sbjct: 329  EVEHRVVSQLLTLMDGLKSRGKVIVIAATNRPNAIDPALRRPGRFDREIMFGVPNEKGRQ 388

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN------------ 999
            EI  IH R +P    V++  ++ ++ G  GADI  + +EAA++ I  N            
Sbjct: 389  EILNIHTRNMPMDKSVDLPYISKITHGFVGADIESLIKEAAMNVIRRNINELNIKEGNNI 448

Query: 1000 ----LDASRITMQHLKTAIRHVQPS 1020
                L+   +TM   + A+R V+PS
Sbjct: 449  PKAVLEKLTVTMDDFREALRFVRPS 473



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/237 (44%), Positives = 151/237 (63%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E + +++++ I          LG+ P +GVLL+GPPG GKT LAR  A +S  +
Sbjct: 216 VGGLKDEVSKIREMVEIPLKHPEIFMRLGVTPPRGVLLYGPPGAGKTLLARAVADESDAH 275

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T+NGPEV+S+  G++E+ L E+FD A ++AP+++FIDE+DAIA  R++   E+  R+V
Sbjct: 276 FITINGPEVMSKWVGDAEKKLREIFDDAEKNAPSIIFIDEIDAIATKREESIGEVEHRVV 335

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VIAATNRP++I+PALRRPGR DREI      +F         V
Sbjct: 336 SQLLTLMDGLKSRGKVIVIAATNRPNAIDPALRRPGRFDREI------MF--------GV 381

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVE--YLSMATHGFVGADLAALCNEAALVCLRR 646
           P+   R EIL+     M    +D  V+  Y+S  THGFVGAD+ +L  EAA+  +RR
Sbjct: 382 PNEKGRQEILNIHTRNMP---MDKSVDLPYISKITHGFVGADIESLIKEAAMNVIRR 435



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 122/215 (56%), Gaps = 20/215 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           +   +G+ P KG+LL GPPGTGKT LA+  AH++  N   + GPE+ ++  GESE+ + E
Sbjct: 513 SFRKIGITPPKGILLFGPPGTGKTLLAKAVAHETESNFIAIKGPEIYNKYVGESEKRVRE 572

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKD-GGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           +FD A Q +P+++FIDELD+IA +R +  G   ++++V  LL  +DG+     V+VI AT
Sbjct: 573 IFDKARQVSPSIIFIDELDSIASSRSNYEGNNSAEQVVNQLLTELDGIEPLKNVIVIGAT 632

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP--AQRLEILHALLSGMEHS 611
           NR D ++ A+ R GR D       + +F         VP P  A R EIL   +  M   
Sbjct: 633 NRIDKVDSAILRTGRFD-------NIVF---------VPPPDEAGRKEILKVYIDKMPIE 676

Query: 612 LLDSE-VEYLSMATHGFVGADLAALCNEAALVCLR 645
               E + +L   T G+VG+D+  L  EA +  LR
Sbjct: 677 GDKEELINFLVKKTEGYVGSDIERLTKEAGMNALR 711


>gi|73669574|ref|YP_305589.1| cell division cycle protein [Methanosarcina barkeri str. Fusaro]
 gi|72396736|gb|AAZ71009.1| cell division cycle protein [Methanosarcina barkeri str. Fusaro]
          Length = 763

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 133/272 (48%), Positives = 184/272 (67%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE A   V+PSA+RE+++EVP V W+DVGG  EVK  L E VEWP K+ E+++ IG   
Sbjct: 462  DFENALKDVQPSAIREILIEVPTVGWDDVGGLEEVKRLLKEVVEWPLKNPESYRDIGVEA 521

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+A+A E+  NF+  KG +L SKW GESEK +  +F +AR  A
Sbjct: 522  PKGVLLYGPPGTGKTLLAKAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVA 581

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSIIF DE+D LA IRG       V+ R+++QLL E+DGL +   V VI ATNRPD IDP
Sbjct: 582  PSIIFLDELDSLAPIRGASISEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDVIDP 641

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+RPGRFD L+ V  P+E  R EIF++H  K+  + D++I +L  +++  TGADI+ +C
Sbjct: 642  ALIRPGRFDELILVPIPDEGARREIFKVHTEKMELAEDIDIEKLVSITDQYTGADIAAVC 701

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            ++A   A+ E++ A  +  +H   AI    PS
Sbjct: 702  KKAGRLALREDIHAKNVKQRHFLKAITETGPS 733



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 121/277 (43%), Positives = 175/277 (63%), Gaps = 19/277 (6%)

Query: 764  EVILE--VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCS 821
            EVI E  +P V +ED+GG +E   ++ E +E P  H E F R+G   P G+L+ GPPG  
Sbjct: 202  EVIPEQNIPTVMYEDLGGLKEAIGKVREMIELPLNHPELFDRLGIDAPKGVLLHGPPGTG 261

Query: 822  KTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA 881
            KTL+A+AVA+E+   F+++ GPE+ SK+ GESE+A+R +F  A  NAP+IIF DEID +A
Sbjct: 262  KTLLAKAVANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIFLDEIDSIA 321

Query: 882  AIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLY 941
              R + +    V  RV++QLL  +DGL  R NV VI +TNRP+ +D AL RPGRFDR + 
Sbjct: 322  PKRAEVTG--EVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEALDVALRRPGRFDREIE 379

Query: 942  VGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---- 997
            +  P+   R EIF+IH R +P + +VN+ + A ++ G  GADI+ +CREAA+SA+     
Sbjct: 380  LRVPDTDGRLEIFQIHTRGMPLAENVNLMDFAQITYGFVGADIAALCREAAMSALRRVLP 439

Query: 998  -----------ENLDASRITMQHLKTAIRHVQPSEIH 1023
                       E LD+ ++  +  + A++ VQPS I 
Sbjct: 440  KINLNEPEIPAEILDSLQVIREDFENALKDVQPSAIR 476



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/250 (44%), Positives = 157/250 (62%), Gaps = 23/250 (9%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           QN+   + +D   LGGL +    ++++I +  +       LG+   KGVLLHGPPGTGKT
Sbjct: 207 QNIPTVMYED---LGGLKEAIGKVREMIELPLNHPELFDRLGIDAPKGVLLHGPPGTGKT 263

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            LA+  A++S     ++NGPE++S+ YGESE+A+ E+F+ A ++APA++F+DE+D+IAP 
Sbjct: 264 LLAKAVANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIFLDEIDSIAPK 323

Query: 519 RKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
           R +   E+ +R+VA LL+LMDG+     V+VI +TNRP++++ ALRRPGR DREIE+   
Sbjct: 324 RAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEALDVALRRPGRFDREIEL--- 380

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALC 636
                       VP    RLEI      GM    L   V  +  A  T+GFVGAD+AALC
Sbjct: 381 -----------RVPDTDGRLEIFQIHTRGMP---LAENVNLMDFAQITYGFVGADIAALC 426

Query: 637 NEAALVCLRR 646
            EAA+  LRR
Sbjct: 427 REAAMSALRR 436



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 138/237 (58%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDIIISSSVKS--TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           +GGL +   +LK+++    +K+  +   +G+   KGVLL+GPPGTGKT LA+  AH+S  
Sbjct: 490 VGGLEEVKRLLKEVV-EWPLKNPESYRDIGVEAPKGVLLYGPPGTGKTLLAKAIAHESDA 548

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQ 528
           N  T  G +++S+ YGESE+ + EVF  A Q AP+++F+DELD++AP R     E  ++ 
Sbjct: 549 NFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPIRGASISEPQVTA 608

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R++  LL+ MDG+     V+VI ATNRPD I+PAL RPGR D  I +             
Sbjct: 609 RILNQLLSEMDGLEELRAVVVIGATNRPDVIDPALIRPGRFDELILV------------- 655

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             +P    R EI       ME +  D ++E L   T  + GAD+AA+C +A  + LR
Sbjct: 656 -PIPDEGARREIFKVHTEKMELA-EDIDIEKLVSITDQYTGADIAAVCKKAGRLALR 710


>gi|448306218|ref|ZP_21496127.1| AAA family ATPase [Natronorubrum bangense JCM 10635]
 gi|445598632|gb|ELY52687.1| AAA family ATPase [Natronorubrum bangense JCM 10635]
          Length = 754

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 145/320 (45%), Positives = 204/320 (63%), Gaps = 17/320 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF++A   ++PSAMREV +EVP V W DVGG  + K +L E ++WP  + E F+
Sbjct: 432  LQVNKQDFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGDTKERLRETIQWPLDYPEVFE 491

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +      G++M+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F 
Sbjct: 492  AMDMNAAKGVMMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKYVGESEKGVREIFE 551

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR+NAP++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNR
Sbjct: 552  KARSNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNR 611

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR ++V  P+E  R++IF +H R  P +  V++  LA  +EG  GA
Sbjct: 612  PDLIDSALLRPGRLDRHVHVPVPDEDGRKKIFEVHTRNKPLADTVDLEWLAGKTEGYVGA 671

Query: 983  DISLICREAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEI----HSYK 1026
            DI  + REA+++A  E +++             RI+  H + A+  V PS        Y+
Sbjct: 672  DIEAVTREASMAASREFINSVEREDIGDSVGNVRISTDHFEHALEEVGPSVTPETREQYE 731

Query: 1027 ELSAKFQRLVHSNAEADESG 1046
            EL  +FQ+      E D+ G
Sbjct: 732  ELEEQFQQ-AEPTTEKDQLG 750



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPDVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAPSI+F DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEKLREVFEEAEENAPSIVFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEIGVPDKE 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------E 998
             R+EI ++H R +P +  V++   A  + G  GAD+  + RE+A++A+           E
Sbjct: 363  GRKEILQVHTRGMPLTDSVDLEHYASNTHGFVGADLESLARESAMNALRRIRPELDLESE 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++  Q  K A++ +QPS
Sbjct: 423  EIDADVLDRLQVNKQDFKEALKGIQPS 449



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 151/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++AP++VFIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEKLREVFEEAEENAPSIVFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L DS ++E+ +  THGFVGADL +L  E+A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGM--PLTDSVDLEHYASNTHGFVGADLESLARESAMNALRR 412



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 25/297 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I           ++ +   KGV+++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLGDTKERLRETIQWPLDYPEVFEAMDMNAAKGVMMYGPPGTGKTLLAKAVANEAE 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + E+F+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREIFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP    R +I    +      L D+ ++E+L+  T G+VGAD+ A+  EA++   R 
Sbjct: 632 --PVPDEDGRKKIFE--VHTRNKPLADTVDLEWLAGKTEGYVGADIEAVTREASMAASRE 687

Query: 647 YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCS-----RNITESSRDCLDSASPCT 698
           +       D+  S G +     H +  L++   S     R   E   +    A P T
Sbjct: 688 FINSVEREDIGDSVGNVRISTDHFEHALEEVGPSVTPETREQYEELEEQFQQAEPTT 744


>gi|448702839|ref|ZP_21700196.1| ATPase AAA [Halobiforma lacisalsi AJ5]
 gi|445776932|gb|EMA27908.1| ATPase AAA [Halobiforma lacisalsi AJ5]
          Length = 755

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 137/284 (48%), Positives = 192/284 (67%), Gaps = 12/284 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP + W DVGG  + K +L E ++WP  + E F+++    
Sbjct: 439  DFKEALKGIQPSAMREVFVEVPDITWNDVGGLEDTKERLRETIQWPLDYPEVFEQMDMEA 498

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 499  AKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKYVGESEKGVREVFEKARSNA 558

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 559  PTVIFFDEIDSIAGERGQRQADSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 618

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R++IF +H R  P +  V++  LA  +EG  GADI  +C
Sbjct: 619  ALLRPGRLDRHVHVPVPDEEGRKKIFEVHTRDKPLADAVDLDWLAAETEGYVGADIEAVC 678

Query: 989  REAAISAIEENLDA------------SRITMQHLKTAIRHVQPS 1020
            REA+++A  E +++             RI+ +H + A+  V PS
Sbjct: 679  REASMAASREFINSVDPEEMADTVGNVRISKEHFEHALEEVNPS 722



 Score =  233 bits (593), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 118/267 (44%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP+V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 186  VPEVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 245

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+IIF DE+D +AA R  E 
Sbjct: 246  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR--EE 303

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 304  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEIGVPDKE 363

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------E 998
             R+EI ++H R +P   DV++   A  + G  GAD+  + RE A++A+           E
Sbjct: 364  GRKEILQVHTRGMPLEEDVDLEHYAANTHGFVGADLESLAREGAMNALRRIRPDLDLESE 423

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T    K A++ +QPS
Sbjct: 424  EIDADVLESLQVTEDDFKEALKGIQPS 450



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/235 (46%), Positives = 148/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 194 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 253

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 254 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKREEAGGDVERRVV 313

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 314 AQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEI--------------GV 359

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM     D ++E+ +  THGFVGADL +L  E A+  LRR
Sbjct: 360 PDKEGRKEILQVHTRGMPLE-EDVDLEHYAANTHGFVGADLESLAREGAMNALRR 413



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 138/243 (56%), Gaps = 24/243 (9%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            + +   KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 465 NDVGGLEDTKERLRETIQWPLDYPEVFEQMDMEAAKGVLMYGPPGTGKTLLAKAVANEAE 524

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR----KDGGEE 525
            N  ++ GPE++++  GESE+ + EVF+ A  +AP V+F DE+D+IA  R     D G  
Sbjct: 525 SNFISIKGPELLNKYVGESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQADSG-- 582

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           + +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +          
Sbjct: 583 VGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV---------- 632

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCL 644
                VP    R +I    +   +  L D+ ++++L+  T G+VGAD+ A+C EA++   
Sbjct: 633 ----PVPDEEGRKKIFE--VHTRDKPLADAVDLDWLAAETEGYVGADIEAVCREASMAAS 686

Query: 645 RRY 647
           R +
Sbjct: 687 REF 689


>gi|284165841|ref|YP_003404120.1| ATPase AAA [Haloterrigena turkmenica DSM 5511]
 gi|284015496|gb|ADB61447.1| AAA family ATPase, CDC48 subfamily [Haloterrigena turkmenica DSM
            5511]
          Length = 754

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 140/300 (46%), Positives = 196/300 (65%), Gaps = 16/300 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A   ++PSAMREV +E+P V W+DVGG  + K +L E V+WP  + E F  +  + 
Sbjct: 438  DFKDAIKGIQPSAMREVFVEIPDVTWDDVGGLEDTKERLRENVQWPLDYPEVFDELDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG++     V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGQRGRQQSDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDN 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R +IF +H R  P +  V++  LA  +EG  GADI  + 
Sbjct: 618  ALLRPGRLDRHVHVPVPDEEGRRKIFEVHTRGKPLADSVDLDWLAAETEGYVGADIEAVT 677

Query: 989  REAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A  E +++             RI+ +H + A+  V PS        Y+E+  +F
Sbjct: 678  REASMAASREFINSVDPEEMADTIGNVRISKEHFEHALEEVNPSVTPETREQYEEIEEQF 737



 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 168/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR--ED 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEIGVPDKD 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EE 998
             R+EI ++H R +P    +++ + A  + G  GAD+  + RE A++A+          E+
Sbjct: 363  GRKEILQVHTRGMPLQESIDLDQYAENTHGFVGADLESLVREGAMNALRRIRPDLDLEED 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA       +T    K AI+ +QPS
Sbjct: 423  EIDAEILETLEVTEDDFKDAIKGIQPS 449



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 149/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R+D G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKREDAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L +S +++  +  THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKDGRKEILQVHTRGM--PLQESIDLDQYAENTHGFVGADLESLVREGAMNALRR 412



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 149/276 (53%), Gaps = 28/276 (10%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               L ++  KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 489 VFDELDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVRE 548

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           VF+ A  +AP V+F DE+D+IA  R     D G  + +R+V+ LL  +DG+   + V+VI
Sbjct: 549 VFEKARSNAPTVIFFDEIDSIAGQRGRQQSDSG--VGERVVSQLLTELDGLEELEDVVVI 606

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
           A TNRPD I+ AL RPGRLDR + +               VP    R +I      G   
Sbjct: 607 ATTNRPDLIDNALLRPGRLDRHVHV--------------PVPDEEGRRKIFEVHTRG--K 650

Query: 611 SLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGH 669
            L DS ++++L+  T G+VGAD+ A+  EA++   R +       ++  + G +   + H
Sbjct: 651 PLADSVDLDWLAAETEGYVGADIEAVTREASMAASREFINSVDPEEMADTIGNVRISKEH 710

Query: 670 SDTMLQDSDCS-----RNITESSRDCLDSASPCTSD 700
            +  L++ + S     R   E   +  D+A P   +
Sbjct: 711 FEHALEEVNPSVTPETREQYEEIEEQFDTAEPAQEE 746


>gi|433590960|ref|YP_007280456.1| AAA family ATPase, CDC48 subfamily [Natrinema pellirubrum DSM 15624]
 gi|448334493|ref|ZP_21523668.1| ATPase AAA [Natrinema pellirubrum DSM 15624]
 gi|448385434|ref|ZP_21563940.1| ATPase AAA [Haloterrigena thermotolerans DSM 11522]
 gi|433305740|gb|AGB31552.1| AAA family ATPase, CDC48 subfamily [Natrinema pellirubrum DSM 15624]
 gi|445619825|gb|ELY73342.1| ATPase AAA [Natrinema pellirubrum DSM 15624]
 gi|445656929|gb|ELZ09761.1| ATPase AAA [Haloterrigena thermotolerans DSM 11522]
          Length = 754

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 141/300 (47%), Positives = 196/300 (65%), Gaps = 16/300 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG  + K +L E V+WP  + E F  +  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWNDVGGLEDTKERLRENVQWPLDYPEVFDELDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG++     V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGQRGRQQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R +IF +H R  P +  V++  LA  +EG  GADI  + 
Sbjct: 618  ALLRPGRLDRHVHVPVPDEGGRRKIFEVHTRDKPLADAVDLDWLAAETEGYVGADIEAVT 677

Query: 989  REAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEI----HSYKELSAKF 1032
            REA+++A  E +++             RI+ +H + A+  V PS        Y+E+  +F
Sbjct: 678  REASMAASREFINSVDPEEMADTVGNVRISKEHFEHALEEVNPSVTPETREQYEEIEEQF 737



 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 115/267 (43%), Positives = 167/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEKLREVFEEAEENAPAIVFIDELDSIAAKR--ED 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEIGVPDKD 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EE 998
             R+EI ++H R +P    +++   A  + G  GAD+  + RE A++A+          E+
Sbjct: 363  GRKEILQVHTRGMPLQEGIDLDRYAENTHGFVGADLESLTREGAMNALRRIRPDLDLEED 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA       +T    K A++ +QPS
Sbjct: 423  EIDAEVLETLEVTEGDFKEALKGIQPS 449



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/238 (47%), Positives = 146/238 (61%), Gaps = 22/238 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDELD+IA  R+D G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEKLREVFEEAEENAPAIVFIDELDSIAAKREDAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   E   LD   E     THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKDGRKEILQVHTRGMPLQEGIDLDRYAEN----THGFVGADLESLTREGAMNALRR 412



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 150/274 (54%), Gaps = 24/274 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               L ++  KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 489 VFDELDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVRE 548

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF+ A  +AP V+F DE+D+IA    R+ G   + +R+V+ LL  +DG+   + V+VIA 
Sbjct: 549 VFEKARSNAPTVIFFDEIDSIAGQRGRQQGDSGVGERVVSQLLTELDGLEELEDVVVIAT 608

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R +I    +   +  L
Sbjct: 609 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDEGGRRKIFE--VHTRDKPL 652

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSD 671
            D+ ++++L+  T G+VGAD+ A+  EA++   R +       ++  + G +   + H +
Sbjct: 653 ADAVDLDWLAAETEGYVGADIEAVTREASMAASREFINSVDPEEMADTVGNVRISKEHFE 712

Query: 672 TMLQDSDCS-----RNITESSRDCLDSASPCTSD 700
             L++ + S     R   E   +  D+A P   +
Sbjct: 713 HALEEVNPSVTPETREQYEEIEEQFDTAEPAQEE 746


>gi|448317578|ref|ZP_21507128.1| ATPase AAA [Natronococcus jeotgali DSM 18795]
 gi|445602969|gb|ELY56939.1| ATPase AAA [Natronococcus jeotgali DSM 18795]
          Length = 755

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 141/308 (45%), Positives = 201/308 (65%), Gaps = 16/308 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   D ++A   ++PSAMREV +EVP V W DVGG  + K +L E ++WP  + E F
Sbjct: 431  SLEVTEADVKEALKGIQPSAMREVFVEVPDVTWNDVGGLSDTKERLRETIQWPLDYPEVF 490

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++  +   G+LM+GPPG  KTL+A+AVA+E+  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 491  EQMDMQAAKGVLMYGPPGTGKTLLAKAVANESQSNFISIKGPELLNKYVGESEKGVREVF 550

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+NAP++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TN
Sbjct: 551  EKARSNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTN 610

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R +IF +H R  P +  V++  LA  +EG  G
Sbjct: 611  RPDLIDSALLRPGRLDRHVHVPVPDEEARRKIFEVHTRDKPLADAVDLEWLASETEGYVG 670

Query: 982  ADISLICREAAISAIEE------------NLDASRITMQHLKTAIRHVQPSEI----HSY 1025
            ADI  + REA+++A  E             ++  RI+ +H + A+  VQPS        Y
Sbjct: 671  ADIEAVTREASMAASREFINSVDPDDMPDTIENVRISKEHFERALEEVQPSVTPETRERY 730

Query: 1026 KELSAKFQ 1033
            +E+  +FQ
Sbjct: 731  EEIEQQFQ 738



 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 118/267 (44%), Positives = 168/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVTYEDIGGLDNELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKE 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------E 998
             R+EI ++H R +P S D+++   A  + G  GAD+  + RE A++A+           E
Sbjct: 363  GRKEILQVHTRGMPLSEDIDLEHYAENTHGFVGADLESLAREGAMNALRRIRPDLDLESE 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA       +T   +K A++ +QPS
Sbjct: 423  EIDAEILESLEVTEADVKEALKGIQPS 449



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/235 (46%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDNELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S  D ++E+ +  THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGMPLS-EDIDLEHYAENTHGFVGADLESLAREGAMNALRR 412



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 139/241 (57%), Gaps = 20/241 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGLS     L++ I            + ++  KGVL++GPPGTGKT LA+  A++S 
Sbjct: 464 NDVGGLSDTKERLRETIQWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANESQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + EVF+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP    R +I    +   +  L D+ ++E+L+  T G+VGAD+ A+  EA++   R 
Sbjct: 632 --PVPDEEARRKIFE--VHTRDKPLADAVDLEWLASETEGYVGADIEAVTREASMAASRE 687

Query: 647 Y 647
           +
Sbjct: 688 F 688


>gi|448348724|ref|ZP_21537572.1| ATPase AAA [Natrialba taiwanensis DSM 12281]
 gi|445642385|gb|ELY95453.1| ATPase AAA [Natrialba taiwanensis DSM 12281]
          Length = 754

 Score =  284 bits (727), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 139/302 (46%), Positives = 198/302 (65%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D ++A   ++PSAMREV +EVP V W DVGG    K +L E ++WP  + + F+++  + 
Sbjct: 438  DLKEALKGIQPSAMREVFVEVPDVTWNDVGGLENTKERLRETIQWPLDYPQVFEQMDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESE+ VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESERGVREIFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDT 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  RE IF +H R  P +  V +  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEAARERIFEVHTRDKPLADAVELDWLAEETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQ----PSEIHSYKELSAKF 1032
            REA+++A            I++++   RI+ +H + A+  VQ    P     Y+++  +F
Sbjct: 678  REASMAASREFINSVEPEDIDDSVGNVRISKEHFEHALDEVQASVTPETRERYEDIEQQF 737

Query: 1033 QR 1034
            Q+
Sbjct: 738  QQ 739



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 170/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  IPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F  A  NAP+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFQTISGPEIMSKYYGESEEQLREVFEDAEENAPAIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEIGVPDKD 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EE 998
             R+EI ++H R +P   ++++   A  + G  GADI  + RE+A++A+          E+
Sbjct: 363  GRKEILQVHTRGMPLEDEIDLDRYAENTHGFVGADIESLTRESAMNALRRIRPDLDLEEQ 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T   LK A++ +QPS
Sbjct: 423  EIDAEVLETLQVTEGDLKEALKGIQPS 449



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/237 (45%), Positives = 149/237 (62%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FQTISGPEIMSKYYGESEEQLREVFEDAEENAPAIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM    L+ E++    A  THGFVGAD+ +L  E+A+  LRR
Sbjct: 359 PDKDGRKEILQVHTRGMP---LEDEIDLDRYAENTHGFVGADIESLTRESAMNALRR 412



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 155/283 (54%), Gaps = 22/283 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            + ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLENTKERLRETIQWPLDYPQVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + E+F+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESERGVREIFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDTALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP  A R  I    +   +  L D+ E+++L+  T G+VGAD+ A+C EA++   R 
Sbjct: 632 --PVPDEAARERIFE--VHTRDKPLADAVELDWLAEETEGYVGADIEAVCREASMAASRE 687

Query: 647 YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 689
           +       D+  S G +   + H +  L +   S  +T  +R+
Sbjct: 688 FINSVEPEDIDDSVGNVRISKEHFEHALDEVQAS--VTPETRE 728


>gi|448400268|ref|ZP_21571335.1| AAA family ATPase [Haloterrigena limicola JCM 13563]
 gi|445667808|gb|ELZ20448.1| AAA family ATPase [Haloterrigena limicola JCM 13563]
          Length = 753

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 136/284 (47%), Positives = 192/284 (67%), Gaps = 12/284 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A   ++PSAMREV +EVP V W DVGG  + K +L E ++WP  + E F+++  + 
Sbjct: 438  DFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGDTKERLRETIQWPLDYPEVFEQLDMQA 497

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 498  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVFEKARSNA 557

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 558  PTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 617

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R++IF +H R  P +  V++  LA  +EG  GADI  +C
Sbjct: 618  ALLRPGRLDRHVHVPVPDEDGRKKIFEVHTRGKPLADAVDLEWLASETEGYVGADIEAVC 677

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            REA+++A            +++ +   R+  +H + A+  V PS
Sbjct: 678  REASMAASREFINSVDPDEMDDTIGNVRVGKEHFEHALEEVSPS 721



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 114/267 (42%), Positives = 165/267 (61%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  E   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNVTYEDIGGLDEELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVI ATNR D +DPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERGRVTVIGATNRVDALDPALRRGGRFDREIEIGVPDKE 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------E 998
             R+EI ++H R +P    +++   A  + G  GAD+  + RE+A++A+           E
Sbjct: 363  GRKEILQVHTRGMPLDESIDLEHYAENTHGFVGADLESLARESAMNALRRIRPELDLESE 422

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA       +     K A++ +QPS
Sbjct: 423  EIDADVLESLEVGEDDFKEALKGIQPS 449



 Score =  198 bits (503), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/237 (45%), Positives = 151/237 (63%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDEELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VI ATNR D+++PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGRVTVIGATNRVDALDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDS--EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM    LD   ++E+ +  THGFVGADL +L  E+A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGMP---LDESIDLEHYAENTHGFVGADLESLARESAMNALRR 412



 Score =  156 bits (394), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 138/241 (57%), Gaps = 20/241 (8%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            L ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 464 NDVGGLGDTKERLRETIQWPLDYPEVFEQLDMQAAKGVLMYGPPGTGKTLLAKAVANEAQ 523

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            N  ++ GPE++++  GESE+ + EVF+ A  +AP V+F DE+D+IA  R  + G   + 
Sbjct: 524 SNFISIKGPELLNKYVGESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
              VP    R +I      G    L D+ ++E+L+  T G+VGAD+ A+C EA++   R 
Sbjct: 632 --PVPDEDGRKKIFEVHTRG--KPLADAVDLEWLASETEGYVGADIEAVCREASMAASRE 687

Query: 647 Y 647
           +
Sbjct: 688 F 688


>gi|313125920|ref|YP_004036190.1| ATPase AAA [Halogeometricum borinquense DSM 11551]
 gi|448285761|ref|ZP_21477000.1| ATPase AAA [Halogeometricum borinquense DSM 11551]
 gi|312292285|gb|ADQ66745.1| AAA family ATPase, CDC48 subfamily [Halogeometricum borinquense DSM
            11551]
 gi|445575791|gb|ELY30254.1| ATPase AAA [Halogeometricum borinquense DSM 11551]
          Length = 754

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/291 (47%), Positives = 195/291 (67%), Gaps = 12/291 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   DF+ A   + PSA+REV +EVP V WE+VGG    K +L E ++WP ++ E +
Sbjct: 430  SLEVREDDFKDAMKGIEPSALREVFVEVPDVTWENVGGLENTKERLRETIQWPLEYPEVY 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++  +   G+L++GPPG  KTL+A+AVA+EA  NF++VKGPEL +K+VGESEK VR +F
Sbjct: 490  EKMDMQSAKGVLLYGPPGTGKTLLAKAVANEADSNFISVKGPELLNKYVGESEKGVREIF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +A  RG+ S    VS+RV+SQLL ELDGL    +V VIA +N
Sbjct: 550  KKARENAPTVVFFDEIDSIAIERGQSSGDSGVSERVVSQLLTELDGLESLEDVVVIATSN 609

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  IF +H    P + DV++ +LA  +EG  G
Sbjct: 610  RPDLIDSALLRPGRLDRHIHVPVPDEEARHAIFEVHTEHKPLADDVDLDQLARKTEGYVG 669

Query: 982  ADISLICREAAISAIEENLDAS------------RITMQHLKTAIRHVQPS 1020
            ADI  +CREA+++A  E +++             R+TM H + A+  V PS
Sbjct: 670  ADIEAVCREASMAASREFINSVEPEEVEESIGNVRVTMDHFEAALDEVNPS 720



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E P V +ED+GG      Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+
Sbjct: 183  EGPSVTYEDIGGLDRELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAK 242

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   +F  + GPE+ SK+ GESE+ +R +F  A  NAP+I+F DEID +A  RG+ 
Sbjct: 243  AVANEIDASFHTISGPEIMSKYYGESEEQLREIFEDAEENAPAIVFIDEIDSIAPKRGEA 302

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P++
Sbjct: 303  --GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDPALRRGGRFDREIEIGVPDK 360

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE-----NLDA 1002
              R+EI ++H R +P +  V++ E A ++ G  GADI  + +E+A++A+       +LD 
Sbjct: 361  EGRKEILQVHTRNMPTAEGVDLDEYAEITHGFVGADIESLAKESAMNALRRIRPQLDLDE 420

Query: 1003 SRITMQHL----------KTAIRHVQPS 1020
              I    L          K A++ ++PS
Sbjct: 421  DEIDTDVLESLEVREDDFKDAMKGIEPS 448



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/257 (43%), Positives = 157/257 (61%), Gaps = 28/257 (10%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLDRELEQVREMIELPMRHPELFKRLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAS 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A ++APA+VFIDE+D+IAP R + G ++ +R+V
Sbjct: 252 FHTISGPEIMSKYYGESEEQLREIFEDAEENAPAIVFIDEIDSIAPKRGEAGGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLDERGEVVVIGATNRVDAIDPALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY- 647
           P    R EIL      M   E   LD   EY  + THGFVGAD+ +L  E+A+  LRR  
Sbjct: 358 PDKEGRKEILQVHTRNMPTAEGVDLD---EYAEI-THGFVGADIESLAKESAMNALRRIR 413

Query: 648 -----SKIQTSSDVLHS 659
                 + +  +DVL S
Sbjct: 414 PQLDLDEDEIDTDVLES 430



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 130/214 (60%), Gaps = 23/214 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           + ++  KGVLL+GPPGTGKT LA+  A+++  N  +V GPE++++  GESE+ + E+F  
Sbjct: 492 MDMQSAKGVLLYGPPGTGKTLLAKAVANEADSNFISVKGPELLNKYVGESEKGVREIFKK 551

Query: 499 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A ++AP VVF DE+D+IA  R    G   +S+R+V+ LL  +DG+   + V+VIA +NRP
Sbjct: 552 ARENAPTVVFFDEIDSIAIERGQSSGDSGVSERVVSQLLTELDGLESLEDVVVIATSNRP 611

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS-GMEHSLL-- 613
           D I+ AL RPGRLDR I                 VP P +  E  HA+     EH  L  
Sbjct: 612 DLIDSALLRPGRLDRHIH----------------VPVPDE--EARHAIFEVHTEHKPLAD 653

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           D +++ L+  T G+VGAD+ A+C EA++   R +
Sbjct: 654 DVDLDQLARKTEGYVGADIEAVCREASMAASREF 687


>gi|255514182|gb|EET90444.1| AAA family ATPase, CDC48 subfamily [Candidatus Micrarchaeum
            acidiphilum ARMAN-2]
          Length = 756

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 146/295 (49%), Positives = 196/295 (66%), Gaps = 5/295 (1%)

Query: 741  CALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEA 800
             +L++   DF +A   V+PSA+REV +E P V W DVGG   VK QL EAVE P K  E 
Sbjct: 458  VSLEVSKEDFVRAFNSVQPSALREVFVERPNVHWSDVGGLDRVKEQLKEAVELPIKSPEM 517

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
            F ++G RP  G+L+ G PG  KT++A+AVA+E   NF+++KGPE  SK+VGESEKAVR +
Sbjct: 518  FTKMGIRPIKGVLLVGAPGTGKTMLAKAVATERESNFISIKGPEFLSKYVGESEKAVREV 577

Query: 861  FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
            F KA+  AP IIF DEID +A  RG ++    VS+RV+  LL E+DGL +  NV VIAAT
Sbjct: 578  FRKAKMAAPCIIFIDEIDSVAYSRGTDTGDSMVSERVVDTLLTEMDGLQELKNVIVIAAT 637

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPALLRPGRFD+++ +  P+E  R  IF +H +++P   DVNI +LA  +EG T
Sbjct: 638  NRPDIIDPALLRPGRFDKIIEIPMPDEKTRISIFNVHTKRMPLDKDVNIEQLAKETEGYT 697

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRL 1035
            GA+I  ICREA ++AI    D  RI+      AI+ ++P+     KE+  + +R 
Sbjct: 698  GAEIENICREAGMNAIRTKKD--RISKADFDFAIKEIKPA---IPKEMEDRIKRF 747



 Score =  233 bits (593), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 112/244 (45%), Positives = 168/244 (68%), Gaps = 2/244 (0%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            V+   + E ++ +  V +ED+GG +    ++ E VE P ++ E F+++G  PP G+L++G
Sbjct: 202  VKTEPVSESMVRIGDVHYEDIGGLKNEIQKIREMVELPIRYPELFEKLGIEPPKGVLLYG 261

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
             PG  KTL+A+AVA+E+  NF+ + GPEL SK+VGESE+ +RS+F +A+  AP+IIF DE
Sbjct: 262  APGTGKTLLAKAVANESDANFIDISGPELVSKFVGESEERLRSIFIEAKEKAPTIIFMDE 321

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R + ++   V  R++SQLL  +DG+  R  V VI ATNRPD IDPAL RPGRF
Sbjct: 322  IDAIAPRREEATN--EVERRMVSQLLTLMDGMGSRGQVIVIGATNRPDAIDPALRRPGRF 379

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + +G P+   R+EI +IH R +P + DVNI +LA ++ G TGAD++ + REAA++ +
Sbjct: 380  DREIEIGVPDRNARKEILQIHTRNMPLAKDVNIDDLADITHGYTGADLTALAREAAMATL 439

Query: 997  EENL 1000
             + L
Sbjct: 440  RKIL 443



 Score =  196 bits (498), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 143/235 (60%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   +++++ +          LG+ P KGVLL+G PGTGKT LA+  A++S  N
Sbjct: 222 IGGLKNEIQKIREMVELPIRYPELFEKLGIEPPKGVLLYGAPGTGKTLLAKAVANESDAN 281

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              ++GPE+VS+  GESE+ L  +F  A + AP ++F+DE+DAIAP R++   E+ +RMV
Sbjct: 282 FIDISGPELVSKFVGESEERLRSIFIEAKEKAPTIIFMDEIDAIAPRREEATNEVERRMV 341

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRPD+I+PALRRPGR DREIEI               V
Sbjct: 342 SQLLTLMDGMGSRGQVIVIGATNRPDAIDPALRRPGRFDREIEI--------------GV 387

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL      M  +  D  ++ L+  THG+ GADL AL  EAA+  LR+
Sbjct: 388 PDRNARKEILQIHTRNMPLA-KDVNIDDLADITHGYTGADLTALAREAAMATLRK 441



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 139/239 (58%), Gaps = 20/239 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKS--TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           S +GGL +    LK+ +    +KS    + +G+RP KGVLL G PGTGKT LA+  A + 
Sbjct: 492 SDVGGLDRVKEQLKEAV-ELPIKSPEMFTKMGIRPIKGVLLVGAPGTGKTMLAKAVATER 550

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEEL- 526
             N  ++ GPE +S+  GESE+A+ EVF  A  +AP ++FIDE+D++A +R  D G+ + 
Sbjct: 551 ESNFISIKGPEFLSKYVGESEKAVREVFRKAKMAAPCIIFIDEIDSVAYSRGTDTGDSMV 610

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           S+R+V TLL  MDG+     V+VIAATNRPD I+PAL RPGR D+ IEI M         
Sbjct: 611 SERVVDTLLTEMDGLQELKNVIVIAATNRPDIIDPALLRPGRFDKIIEIPM--------- 661

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                P    R+ I +     M     D  +E L+  T G+ GA++  +C EA +  +R
Sbjct: 662 -----PDEKTRISIFNVHTKRMPLD-KDVNIEQLAKETEGYTGAEIENICREAGMNAIR 714


>gi|345315162|ref|XP_001513766.2| PREDICTED: cell division cycle protein 48 homolog MJ1156-like,
            partial [Ornithorhynchus anatinus]
          Length = 313

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 144/315 (45%), Positives = 204/315 (64%), Gaps = 30/315 (9%)

Query: 747  LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
              D ++A    +PSA++E+ +EVP + W+D+GG  +VK  L E VEWP+ H   FK +  
Sbjct: 1    FADLQQALKITKPSALKELCIEVPHISWDDIGGYDDVKNCLKECVEWPRLHASLFKSLCV 60

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
            RPP GIL++GPPGCSKTLMA+AVA+E+ +NF++VKGPELFSKWVGESE+A+R LF KAR+
Sbjct: 61   RPPRGILLYGPPGCSKTLMAKAVATESHMNFISVKGPELFSKWVGESERAIRELFRKARS 120

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
            N+P ++FFDEID +   R + +D   V  RV+SQLL E+DG+     V VI ATNRPD +
Sbjct: 121  NSPCVVFFDEIDSIGVSR-ELADAGGVGSRVLSQLLNEMDGIDGCKEVVVIGATNRPDIL 179

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNI--RELACLSEGCTGADI 984
            D AL+R GRFDRL+YV  P+E  R +IF IHL  IP    + +  +E+A L++G +GA+I
Sbjct: 180  DQALIRAGRFDRLVYVPLPDEQARCKIFSIHLASIPLDGSLKVISQEMAQLTDGYSGAEI 239

Query: 985  SLICREAAIS---------------------AIEENLDASRITMQHLKTAI----RHVQP 1019
            ++IC+E A+S                     +I EN+   ++  +HLK A+    R  + 
Sbjct: 240  AMICKEGALSSMRATIQKHEAHDICNHLQQLSISENI--VKVQKEHLKAALDVITRRTKQ 297

Query: 1020 SEIHSYKELSAKFQR 1034
            S +  YK  + +  R
Sbjct: 298  STLDFYKRYNEQHMR 312



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 140/251 (55%), Gaps = 25/251 (9%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG       LK+ +    + ++L  SL +RP +G+LL+GPPG  KT +A+  A +S +N
Sbjct: 31  IGGYDDVKNCLKECVEWPRLHASLFKSLCVRPPRGILLYGPPGCSKTLMAKAVATESHMN 90

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK--DGGEELSQR 529
             +V GPE+ S+  GESE+A+ E+F  A  ++P VVF DE+D+I  +R+  D G  +  R
Sbjct: 91  FISVKGPELFSKWVGESERAIRELFRKARSNSPCVVFFDEIDSIGVSRELADAG-GVGSR 149

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +++ LLN MDG+     V+VI ATNRPD ++ AL R GR DR + + +            
Sbjct: 150 VLSQLLNEMDGIDGCKEVVVIGATNRPDILDQALIRAGRFDRLVYVPL------------ 197

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLS--MA--THGFVGADLAALCNEAALVCLR 645
             P    R +I    L+ +    LD  ++ +S  MA  T G+ GA++A +C E AL  +R
Sbjct: 198 --PDEQARCKIFSIHLASIP---LDGSLKVISQEMAQLTDGYSGAEIAMICKEGALSSMR 252

Query: 646 RYSKIQTSSDV 656
              +   + D+
Sbjct: 253 ATIQKHEAHDI 263


>gi|433638739|ref|YP_007284499.1| AAA family ATPase, CDC48 subfamily [Halovivax ruber XH-70]
 gi|433290543|gb|AGB16366.1| AAA family ATPase, CDC48 subfamily [Halovivax ruber XH-70]
          Length = 754

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 141/320 (44%), Positives = 207/320 (64%), Gaps = 16/320 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L+++ VDF++A   ++PSA+REV +EVP V W+DVGG    + +L E ++WP  + E + 
Sbjct: 431  LQVKEVDFKEALKGIQPSALREVFVEVPDVTWDDVGGLEATEERLRETIQWPLDYPEVYD 490

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +  + P G+LM+GPPG  KTL+A+AVA+E+  NF+++KGPEL +K+VGESEK +R +F 
Sbjct: 491  EMDMQAPKGVLMYGPPGTGKTLLAKAVANESQSNFISIKGPELLNKFVGESEKGIREVFE 550

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR+NAP++IFFDEID +A  RG+ S    VS+R++SQLL ELDGL +  +V VIA TNR
Sbjct: 551  KARSNAPTVIFFDEIDSIAGERGRNSGDSGVSERMVSQLLTELDGLEELEDVVVIATTNR 610

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR ++V  P+E  R +IF +H    P +  +++  LA  +EG  GA
Sbjct: 611  PDLIDSALLRPGRLDRHIHVPVPDEAARRKIFAVHTEHKPLADAIDLDWLAAETEGYVGA 670

Query: 983  DISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYK 1026
            DI  + REA+++A            +++ L   RI+ +H + A+  V PS        Y 
Sbjct: 671  DIEAVTREASMAATREFINSVDPDEMDDTLGNVRISKEHFEHALAEVSPSVTAETRERYD 730

Query: 1027 ELSAKFQRLVHSNAEADESG 1046
            E+  +F     + AE D+ G
Sbjct: 731  EIEEQFDSAEPAAAEEDQLG 750



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 113/267 (42%), Positives = 168/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 184  LPDVTYEDIGGLEGELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 243

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DEID +A+ R +E+
Sbjct: 244  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIASKR-EET 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  SG-DVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKE 361

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R EI ++H R +P    +++ + A  + G  GAD++ + REAA++A+            
Sbjct: 362  GRTEILQVHTRGMPLVDSIDLDQYAENTHGFVGADLATLAREAAMNALRRIRPELDLEEE 421

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E L+  ++     K A++ +QPS
Sbjct: 422  EIDAEVLETLQVKEVDFKEALKGIQPS 448



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 151/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLEGELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDE+D+IA  R++   ++ +R+V
Sbjct: 252 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIASKREETSGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L+DS +++  +  THGFVGADLA L  EAA+  LRR
Sbjct: 358 PDKEGRTEILQVHTRGM--PLVDSIDLDQYAENTHGFVGADLATLAREAAMNALRR 411



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 154/273 (56%), Gaps = 30/273 (10%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           + ++  KGVL++GPPGTGKT LA+  A++S  N  ++ GPE++++  GESE+ + EVF+ 
Sbjct: 492 MDMQAPKGVLMYGPPGTGKTLLAKAVANESQSNFISIKGPELLNKFVGESEKGIREVFEK 551

Query: 499 ASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A  +AP V+F DE+D+IA    R  G   +S+RMV+ LL  +DG+   + V+VIA TNRP
Sbjct: 552 ARSNAPTVIFFDEIDSIAGERGRNSGDSGVSERMVSQLLTELDGLEELEDVVVIATTNRP 611

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS-LLDS 615
           D I+ AL RPGRLDR I +               VP  A R +I        EH  L D+
Sbjct: 612 DLIDSALLRPGRLDRHIHV--------------PVPDEAARRKIFAV---HTEHKPLADA 654

Query: 616 -EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTML 674
            ++++L+  T G+VGAD+ A+  EA++   R +       ++  + G +   + H +  L
Sbjct: 655 IDLDWLAAETEGYVGADIEAVTREASMAATREFINSVDPDEMDDTLGNVRISKEHFEHAL 714

Query: 675 QDSDCSRNITESSR-------DCLDSASPCTSD 700
             ++ S ++T  +R       +  DSA P  ++
Sbjct: 715 --AEVSPSVTAETRERYDEIEEQFDSAEPAAAE 745


>gi|448688419|ref|ZP_21694252.1| cell division control protein 48 [Haloarcula japonica DSM 6131]
 gi|445779480|gb|EMA30410.1| cell division control protein 48 [Haloarcula japonica DSM 6131]
          Length = 757

 Score =  283 bits (725), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 139/308 (45%), Positives = 198/308 (64%), Gaps = 16/308 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF +A   + PSA+REV +EVP V W+ VGG    K +L E ++WP ++++ F+
Sbjct: 434  LEISDTDFREAMKGIEPSALREVFVEVPDVTWDSVGGLEGTKERLRETIQWPLEYEDVFE 493

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +      G+LM+GPPG  KTL+A+AVA+EA  NF++VKGPEL +K+VGESEK VR +F+
Sbjct: 494  SMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKFVGESEKGVREVFS 553

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR NAP+++FFDEID +A  RG  +    V +RV+SQLL ELDG+ +  NV V+A TNR
Sbjct: 554  KARENAPTVVFFDEIDSIAGERGGGTTDSGVGERVVSQLLTELDGIEEMENVVVVATTNR 613

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR ++V  P+E  R  IF++H R  P +  V++ ELA  ++G  GA
Sbjct: 614  PDLIDDALLRPGRLDRHVHVPVPDEEARRAIFQVHTRSKPLADGVDLDELASRTDGYVGA 673

Query: 983  DISLICREAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEIHS----YK 1026
            DI  + REA+++A  E +++             R+TM H + A+  V PS        Y 
Sbjct: 674  DIEAVAREASMAATREFINSVDPEEIGDSVSNVRVTMDHFEHALSEVGPSVTEETRERYD 733

Query: 1027 ELSAKFQR 1034
            E+  +F R
Sbjct: 734  EIEQRFDR 741



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 110/268 (41%), Positives = 166/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            + P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+
Sbjct: 186  DTPDVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAK 245

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E    F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  RG E
Sbjct: 246  AVANEIDAYFTTISGPEIMSKYYGESEEQLREVFDEASENSPAIVFIDEIDSIAPKRG-E 304

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            + G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P++
Sbjct: 305  TQG-DVERRVVAQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEIGVPDK 363

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P S +++I   A  + G  GAD++ + +E+A++A+           
Sbjct: 364  EGRKEILQVHTRGMPLSEEIDIENYAENTHGFVGADLATLTKESAMNALRRIRPELDLES 423

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+   I+    + A++ ++PS
Sbjct: 424  DEIDAEVLERLEISDTDFREAMKGIEPS 451



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/235 (46%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 195 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAY 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVFD AS+++PA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FTTISGPEIMSKYYGESEEQLREVFDEASENSPAIVFIDEIDSIAPKRGETQGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S  + ++E  +  THGFVGADLA L  E+A+  LRR
Sbjct: 361 PDKEGRKEILQVHTRGMPLS-EEIDIENYAENTHGFVGADLATLTKESAMNALRR 414



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 157/303 (51%), Gaps = 29/303 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I      +    S+ L   KGVL++GPPGTGKT LA+  A+++  N
Sbjct: 468 VGGLEGTKERLRETIQWPLEYEDVFESMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSN 527

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             +V GPE++++  GESE+ + EVF  A ++AP VVF DE+D+IA  R  G  +  + +R
Sbjct: 528 FISVKGPELLNKFVGESEKGVREVFSKARENAPTVVFFDEIDSIAGERGGGTTDSGVGER 587

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+V+A TNRPD I+ AL RPGRLDR + +              
Sbjct: 588 VVSQLLTELDGIEEMENVVVVATTNRPDLIDDALLRPGRLDRHVHV-------------- 633

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            VP    R  I    +      L D  +++ L+  T G+VGAD+ A+  EA++   R + 
Sbjct: 634 PVPDEEARRAIFQ--VHTRSKPLADGVDLDELASRTDGYVGADIEAVAREASMAATREFI 691

Query: 649 KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD-------CLDSASPCTSDL 701
                 ++  S   +     H +  L  S+   ++TE +R+         D A P  +D 
Sbjct: 692 NSVDPEEIGDSVSNVRVTMDHFEHAL--SEVGPSVTEETRERYDEIEQRFDRAEPGVTDE 749

Query: 702 PTS 704
            T+
Sbjct: 750 STA 752


>gi|55377635|ref|YP_135485.1| cell division control protein 48 [Haloarcula marismortui ATCC 43049]
 gi|55230360|gb|AAV45779.1| cell division control protein 48 [Haloarcula marismortui ATCC 43049]
          Length = 757

 Score =  283 bits (725), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 138/302 (45%), Positives = 195/302 (64%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   + PSA+REV +EVP V W+ VGG  + K +L E ++WP ++++ F+ +    
Sbjct: 440  DFREAMKGIEPSALREVFVEVPDVTWDSVGGLEDTKERLRETIQWPLEYEDVFESMDLEA 499

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF++VKGPEL +K+VGESEK VR +F+KAR NA
Sbjct: 500  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKFVGESEKGVREVFSKARENA 559

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  RG  +    V +RV+SQLL ELDG+    NV V+A TNRPD ID 
Sbjct: 560  PTVVFFDEIDSIAGERGGGTTDSGVGERVVSQLLTELDGIEDMENVVVVATTNRPDLIDD 619

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R  IF++H R  P +  V++ ELA  ++G  GADI  + 
Sbjct: 620  ALLRPGRLDRHVHVPVPDEEARRAIFQVHTRDKPLADGVDLDELASRTDGYVGADIEAVA 679

Query: 989  REAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEIHS----YKELSAKF 1032
            REA+++A  E +++             R+TM H + A+  V PS        Y E+  +F
Sbjct: 680  REASMAATREFINSVDPEDIGDSVSNVRVTMDHFEHALSEVGPSVTEETRERYDEIEQRF 739

Query: 1033 QR 1034
             R
Sbjct: 740  DR 741



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 112/268 (41%), Positives = 167/268 (62%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            + P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+
Sbjct: 186  DTPDVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAK 245

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E    F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DEID +A  RG E
Sbjct: 246  AVANEIDAYFTTISGPEIMSKYYGESEEQLREVFDEASENAPAIVFIDEIDSIAPKRG-E 304

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            + G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P++
Sbjct: 305  TQG-DVERRVVAQLLSLMDGLEERGQVIVIGATNRVDDIDPALRRGGRFDREIEIGVPDK 363

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P S ++NI   A  + G  GAD++ + +E+A++A+           
Sbjct: 364  KGRKEILQVHTRGMPLSEEINIENYAENTHGFVGADLATLTKESAMNALRRIRPELDLES 423

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+   I+ +  + A++ ++PS
Sbjct: 424  DEIDAEVLERLEISDKDFREAMKGIEPS 451



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/235 (47%), Positives = 148/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 195 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAY 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVFD AS++APA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FTTISGPEIMSKYYGESEEQLREVFDEASENAPAIVFIDEIDSIAPKRGETQGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D I+PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLEERGQVIVIGATNRVDDIDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S  +  +E  +  THGFVGADLA L  E+A+  LRR
Sbjct: 361 PDKKGRKEILQVHTRGMPLS-EEINIENYAENTHGFVGADLATLTKESAMNALRR 414



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 29/303 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I      +    S+ L   KGVL++GPPGTGKT LA+  A+++  N
Sbjct: 468 VGGLEDTKERLRETIQWPLEYEDVFESMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSN 527

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             +V GPE++++  GESE+ + EVF  A ++AP VVF DE+D+IA  R  G  +  + +R
Sbjct: 528 FISVKGPELLNKFVGESEKGVREVFSKARENAPTVVFFDEIDSIAGERGGGTTDSGVGER 587

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+V+A TNRPD I+ AL RPGRLDR + +              
Sbjct: 588 VVSQLLTELDGIEDMENVVVVATTNRPDLIDDALLRPGRLDRHVHV-------------- 633

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            VP    R  I    +   +  L D  +++ L+  T G+VGAD+ A+  EA++   R + 
Sbjct: 634 PVPDEEARRAIFQ--VHTRDKPLADGVDLDELASRTDGYVGADIEAVAREASMAATREFI 691

Query: 649 KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD-------CLDSASPCTSDL 701
                 D+  S   +     H +  L  S+   ++TE +R+         D A P  +D 
Sbjct: 692 NSVDPEDIGDSVSNVRVTMDHFEHAL--SEVGPSVTEETRERYDEIEQRFDRAEPGVTDE 749

Query: 702 PTS 704
            T+
Sbjct: 750 STA 752


>gi|392413208|ref|YP_006449815.1| AAA family ATPase, CDC48 subfamily [Desulfomonile tiedjei DSM 6799]
 gi|390626344|gb|AFM27551.1| AAA family ATPase, CDC48 subfamily [Desulfomonile tiedjei DSM 6799]
          Length = 707

 Score =  283 bits (725), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 133/260 (51%), Positives = 187/260 (71%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++ + DF  A   V PSA+REV +EVP V+WEDVGG   +KT+L+E+VEWP ++   F+
Sbjct: 420  LEVHMHDFLTALKDVEPSAVREVFVEVPDVRWEDVGGHAGLKTRLIESVEWPLQYPHIFE 479

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R GT+PP GIL+ GPPGC KTL+A+A+A+E+ +NF++VKGP L SK+VGESE+AVR +F 
Sbjct: 480  RAGTKPPRGILLGGPPGCGKTLLAKAIANESKVNFISVKGPALLSKYVGESEQAVREVFR 539

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KA+  +P I+FFDEID L  +R   S    V +RV+SQ L E DG+ +   V V+ ATNR
Sbjct: 540  KAKQASPCIVFFDEIDALVPVRSSGSSDSHVGERVLSQFLAEFDGIEELNGVLVLGATNR 599

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             D +DPA+LRPGRFD ++ +  P E DREEIFR+HLR  P    V+  +LA  +EG +GA
Sbjct: 600  LDMLDPAVLRPGRFDEIVEIPIPEEADREEIFRVHLRSKPVEKGVDPAKLAKETEGFSGA 659

Query: 983  DISLICREAAISAIEENLDA 1002
            +I+ +C +AA++A+   ++A
Sbjct: 660  EIAAVCNKAALAAVRRCVNA 679



 Score =  223 bits (567), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 114/265 (43%), Positives = 160/265 (60%), Gaps = 17/265 (6%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +ED+GG +    ++ E +E P ++ E F+R+G   P G+L+ GPPGC KTL+AR++A+E 
Sbjct: 178  YEDIGGLKSQLHRIREMIELPLRYPEVFERLGIDAPKGVLLHGPPGCGKTLIARSIANET 237

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              NF  V GPE+  K+ GESE  +R +FA+A A  PSI+F DEID +A  R K      V
Sbjct: 238  EANFFTVSGPEIVHKFYGESEAHLRKIFAEATAKGPSIVFLDEIDAIAPKREKVVG--DV 295

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++QLL  +DGL +R NV VIAATN P+ +DPAL RPGRFDR + +  P+   R EI
Sbjct: 296  EKRVVAQLLALMDGLTKRQNVIVIAATNIPNALDPALRRPGRFDREIAIPIPDRNGRLEI 355

Query: 954  FRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------------E 998
              IH R +P S+DVN+  LA ++ G  GAD+  +CREAA+  +                E
Sbjct: 356  LEIHSRGMPLSTDVNMEHLAEITHGFVGADLEALCREAAMICLRRIMPDIDFAMAGIPYE 415

Query: 999  NLDASRITMQHLKTAIRHVQPSEIH 1023
             L    + M    TA++ V+PS + 
Sbjct: 416  QLKKLEVHMHDFLTALKDVEPSAVR 440



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/235 (46%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +          LG+   KGVLLHGPPG GKT +AR  A+++  N
Sbjct: 181 IGGLKSQLHRIREMIELPLRYPEVFERLGIDAPKGVLLHGPPGCGKTLIARSIANETEAN 240

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            FTV+GPE+V + YGESE  L ++F  A+   P++VF+DE+DAIAP R+    ++ +R+V
Sbjct: 241 FFTVSGPEIVHKFYGESEAHLRKIFAEATAKGPSIVFLDEIDAIAPKREKVVGDVEKRVV 300

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+ +   V+VIAATN P++++PALRRPGR DREI I               +
Sbjct: 301 AQLLALMDGLTKRQNVIVIAATNIPNALDPALRRPGRFDREIAI--------------PI 346

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    RLEIL     GM  S  D  +E+L+  THGFVGADL ALC EAA++CLRR
Sbjct: 347 PDRNGRLEILEIHSRGMPLS-TDVNMEHLAEITHGFVGADLEALCREAAMICLRR 400



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 126/215 (58%), Gaps = 29/215 (13%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G +P +G+LL GPPG GKT LA+  A++S VN  +V GP ++S+  GESEQA+ EVF  A
Sbjct: 482 GTKPPRGILLGGPPGCGKTLLAKAIANESKVNFISVKGPALLSKYVGESEQAVREVFRKA 541

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            Q++P +VF DE+DA+ P R  G  +  + +R+++  L   DG+   +GVLV+ ATNR D
Sbjct: 542 KQASPCIVFFDEIDALVPVRSSGSSDSHVGERVLSQFLAEFDGIEELNGVLVLGATNRLD 601

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL------SGMEHS 611
            ++PA+ RPGR D  +EI               +P  A R EI    L       G++ +
Sbjct: 602 MLDPAVLRPGRFDEIVEI--------------PIPEEADREEIFRVHLRSKPVEKGVDPA 647

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            L  E       T GF GA++AA+CN+AAL  +RR
Sbjct: 648 KLAKE-------TEGFSGAEIAAVCNKAALAAVRR 675


>gi|354611052|ref|ZP_09029008.1| AAA family ATPase, CDC48 subfamily [Halobacterium sp. DL1]
 gi|353195872|gb|EHB61374.1| AAA family ATPase, CDC48 subfamily [Halobacterium sp. DL1]
          Length = 734

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 138/275 (50%), Positives = 188/275 (68%), Gaps = 3/275 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  ++ PSA+REV +E P V WEDVGG  E K +L EA++WP ++ EA++++  + 
Sbjct: 441  DFRAALREIDPSALREVFVETPDVTWEDVGGLEETKARLQEAIQWPLEYPEAYRQVDLQS 500

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+ GPPG  KTL+A+AVA+EA  NF++VKGPELF K+VGESEK VR +F KAR+NA
Sbjct: 501  PKGILLHGPPGTGKTLLAKAVANEAQSNFISVKGPELFDKYVGESEKGVREIFEKARSNA 560

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG      +V +RV+SQLL ELDGL +  +V VIAATNRPD ID 
Sbjct: 561  PTVIFFDEIDSIATKRGSGGSDSNVGERVVSQLLTELDGLEELEDVVVIAATNRPDLIDD 620

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL R GR +R + VG P+E  R EI  IH R  P + DV++  LA  ++   GAD++ +C
Sbjct: 621  ALTRAGRIERKIEVGEPDEETRREILAIHTRDRPLADDVDLDRLAAETDSFVGADLAALC 680

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIH 1023
            REAA  A+ E++   R   +   TA+  +  ++ H
Sbjct: 681  REAATVAVREHV---RSQTEGSATAVEDIVLTQAH 712



 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 112/268 (41%), Positives = 161/268 (60%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E P + +EDVGG  E   Q+ E +E P  H E F+ +G  PP G+L+ GPPG  KTL+A+
Sbjct: 187  EAPGITYEDVGGLDEELDQVREMIELPMSHPELFQALGIEPPQGVLLHGPPGTGKTLIAK 246

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   NF  + GPE+ SK+ GESE+ +R +F +A  N P+I+F DEID +A  R  +
Sbjct: 247  AVANEIDANFQTISGPEIMSKYHGESEERLREVFDEAEENEPAIVFIDEIDSIAPNR-DD 305

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            + G  V  RV++QLL  +DGL  R  VTVI  TNR D IDPAL R GRFDR + +G P+ 
Sbjct: 306  TQG-DVERRVVAQLLSLMDGLEDRGQVTVIGTTNRVDAIDPALRRGGRFDREIEIGAPDT 364

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R++P +  V++ + A  + G  GAD+  + REAA++A+           
Sbjct: 365  RGRKEILQVHTREMPIAESVDLEQYAENTHGFVGADLESLVREAAMNALRRVRPDLDLEG 424

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+   +T    + A+R + PS
Sbjct: 425  DEIDAETLETLDVTEPDFRAALREIDPS 452



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/236 (45%), Positives = 149/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +  S      +LG+ P +GVLLHGPPGTGKT +A+  A++   N
Sbjct: 196 VGGLDEELDQVREMIELPMSHPELFQALGIEPPQGVLLHGPPGTGKTLIAKAVANEIDAN 255

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ +GESE+ L EVFD A ++ PA+VFIDE+D+IAP R D   ++ +R+V
Sbjct: 256 FQTISGPEIMSKYHGESEERLREVFDEAEENEPAIVFIDEIDSIAPNRDDTQGDVERRVV 315

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VI  TNR D+I+PALRR GR DREIEI                
Sbjct: 316 AQLLSLMDGLEDRGQVTVIGTTNRVDAIDPALRRGGRFDREIEI--------------GA 361

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL   +   E  + +S ++E  +  THGFVGADL +L  EAA+  LRR
Sbjct: 362 PDTRGRKEILQ--VHTREMPIAESVDLEQYAENTHGFVGADLESLVREAAMNALRR 415



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 143/244 (58%), Gaps = 20/244 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +  A L++ I            + L+  KG+LLHGPPGTGKT LA+  A+++  N
Sbjct: 469 VGGLEETKARLQEAIQWPLEYPEAYRQVDLQSPKGILLHGPPGTGKTLLAKAVANEAQSN 528

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             +V GPE+  +  GESE+ + E+F+ A  +AP V+F DE+D+IA  R  GG +  + +R
Sbjct: 529 FISVKGPELFDKYVGESEKGVREIFEKARSNAPTVIFFDEIDSIATKRGSGGSDSNVGER 588

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+VIAATNRPD I+ AL R GR++R+IE+              
Sbjct: 589 VVSQLLTELDGLEELEDVVVIAATNRPDLIDDALTRAGRIERKIEV-------------- 634

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
             P    R EIL   +   +  L D  +++ L+  T  FVGADLAALC EAA V +R + 
Sbjct: 635 GEPDEETRREIL--AIHTRDRPLADDVDLDRLAAETDSFVGADLAALCREAATVAVREHV 692

Query: 649 KIQT 652
           + QT
Sbjct: 693 RSQT 696


>gi|448414119|ref|ZP_21577258.1| ATPase AAA [Halosarcina pallida JCM 14848]
 gi|445682412|gb|ELZ34829.1| ATPase AAA [Halosarcina pallida JCM 14848]
          Length = 754

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 136/284 (47%), Positives = 192/284 (67%), Gaps = 12/284 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F+++  + 
Sbjct: 437  DFKDAMKGIEPSALREVFVEVPDVTWEDVGGLEATKERLRETIQWPLEYPEVFEQMDMQS 496

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G++++GPPG  KTL+A+AVA+E+  NF++VKGPEL +K+VGESEK VR +F KAR NA
Sbjct: 497  AKGVMLYGPPGTGKTLLAKAVANESESNFISVKGPELLNKYVGESEKGVREVFKKARENA 556

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  RG+ S    VS+RV+SQLL ELDGL    +V V+A TNRPD ID 
Sbjct: 557  PTVVFFDEIDSIATERGRNSGDSGVSERVVSQLLTELDGLESLEDVVVVATTNRPDLIDS 616

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R  IF +H    P + DV++ +LA  ++G  GADI  +C
Sbjct: 617  ALLRPGRLDRHVHVPVPDEEARRAIFGVHSEHKPLADDVDLDKLARKTDGYVGADIEAVC 676

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            REA+++A            +E+++   R+TM H + A+  V PS
Sbjct: 677  REASMAASREFIRSVSREEVEDSIGNVRVTMDHFEAALDEVGPS 720



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 113/268 (42%), Positives = 166/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E P V +ED+GG      Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+
Sbjct: 183  EGPSVAYEDIGGLDRELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAK 242

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E   +F  + GPE+ SK+ GESE+ +R +F +A  +AP+I+F DEID +A  RG+ 
Sbjct: 243  AVANEIDASFHTISGPEIMSKYYGESEEQLREIFEEAEESAPAIVFIDEIDSIAPKRGEA 302

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
              G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P+ 
Sbjct: 303  --GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDPALRRGGRFDREIEIGVPDR 360

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P + DV++ E A ++ G  GAD+  + +EAA++A+           
Sbjct: 361  EGRKEILQVHTRSMPTAEDVDLDEYADITHGFVGADVESLAKEAAMNAVRRIRPQLDLES 420

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L++  +     K A++ ++PS
Sbjct: 421  EEIDTEVLESLEVRDDDFKDAMKGIEPS 448



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 171/298 (57%), Gaps = 37/298 (12%)

Query: 351 SQPQVTESMDHESNAFVINHETKVYL-YPPLNAVSKSLREGTLPNAQIEFQNVQATVEQD 409
           +QPQ T          VI   T+V +   P   +  S  +GT     + ++++       
Sbjct: 149 TQPQGT---------VVITDSTEVQISQKPAEEIHGSGEDGTGEGPSVAYEDI------- 192

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
               GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++ 
Sbjct: 193 ----GGLDRELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEI 248

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
             +  T++GPE++S+ YGESE+ L E+F+ A +SAPA+VFIDE+D+IAP R + G ++ +
Sbjct: 249 DASFHTISGPEIMSKYYGESEEQLREIFEEAEESAPAIVFIDEIDSIAPKRGEAGGDVER 308

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+VA LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI             
Sbjct: 309 RVVAQLLSLMDGLDERGEVVVIGATNRVDAIDPALRRGGRFDREIEI------------- 355

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
             VP    R EIL      M  +  D +++  +  THGFVGAD+ +L  EAA+  +RR
Sbjct: 356 -GVPDREGRKEILQVHTRSM-PTAEDVDLDEYADITHGFVGADVESLAKEAAMNAVRR 411



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/249 (37%), Positives = 142/249 (57%), Gaps = 29/249 (11%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + ++  KGV+L+GPPGTGKT LA+  A++S  N  +V GPE++++  GESE+ + E
Sbjct: 488 VFEQMDMQSAKGVMLYGPPGTGKTLLAKAVANESESNFISVKGPELLNKYVGESEKGVRE 547

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP VVF DE+D+IA    R  G   +S+R+V+ LL  +DG+   + V+V+A 
Sbjct: 548 VFKKARENAPTVVFFDEIDSIATERGRNSGDSGVSERVVSQLLTELDGLESLEDVVVVAT 607

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI--LHALLSGMEH 610
           TNRPD I+ AL RPGRLDR + +               VP    R  I  +H+     EH
Sbjct: 608 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDEEARRAIFGVHS-----EH 648

Query: 611 SLL--DSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLF 664
             L  D +++ L+  T G+VGAD+ A+C EA++   R + +  +  +V  S G    T+ 
Sbjct: 649 KPLADDVDLDKLARKTDGYVGADIEAVCREASMAASREFIRSVSREEVEDSIGNVRVTMD 708

Query: 665 EFEGHSDTM 673
            FE   D +
Sbjct: 709 HFEAALDEV 717


>gi|344211715|ref|YP_004796035.1| cell division control protein 48/AAA family ATPase [Haloarcula
            hispanica ATCC 33960]
 gi|343783070|gb|AEM57047.1| cell division control protein 48 / AAA family ATPase, CDC48 subfamily
            [Haloarcula hispanica ATCC 33960]
          Length = 757

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 138/302 (45%), Positives = 195/302 (64%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   + PSA+REV +EVP V W+ VGG  + K +L E ++WP ++++ F+ +    
Sbjct: 440  DFREAMKGIEPSALREVFVEVPDVTWDSVGGLEDTKERLRETIQWPLEYEDVFESMDLEA 499

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF++VKGPEL +K+VGESEK VR +F+KAR NA
Sbjct: 500  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKFVGESEKGVREVFSKARENA 559

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  RG  +    V +RV+SQLL ELDG+    NV V+A TNRPD ID 
Sbjct: 560  PTVVFFDEIDSIAGERGGGTTDSGVGERVVSQLLTELDGIEDMENVVVVATTNRPDLIDD 619

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R  IF++H R  P +  V++ ELA  ++G  GADI  + 
Sbjct: 620  ALLRPGRLDRHVHVPVPDEEARRAIFQVHTRDKPLADGVDLDELASRTDGYVGADIEAVA 679

Query: 989  REAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEIHS----YKELSAKF 1032
            REA+++A  E +++             R+TM H + A+  V PS        Y E+  +F
Sbjct: 680  REASMAATREFINSVDPEDIGDSVSNVRVTMDHFEHALSEVGPSVTEETRERYDEIEQRF 739

Query: 1033 QR 1034
             R
Sbjct: 740  DR 741



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 112/268 (41%), Positives = 167/268 (62%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            + P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+
Sbjct: 186  DTPDVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAK 245

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E    F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DEID +A  RG E
Sbjct: 246  AVANEIDAYFTTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKRG-E 304

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            + G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P++
Sbjct: 305  TQG-DVERRVVAQLLSLMDGLEERGQVIVIGATNRVDDIDPALRRGGRFDREIEIGVPDK 363

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P S ++NI   A  + G  GAD++ + +E+A++A+           
Sbjct: 364  KGRKEILQVHTRGMPLSEEINIENYAENTHGFVGADLATLTKESAMNALRRIRPELDLES 423

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+   I+ +  + A++ ++PS
Sbjct: 424  DEIDAEVLERLEISDKDFREAMKGIEPS 451



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/235 (46%), Positives = 147/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 195 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAY 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FTTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKRGETQGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D I+PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLEERGQVIVIGATNRVDDIDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S  +  +E  +  THGFVGADLA L  E+A+  LRR
Sbjct: 361 PDKKGRKEILQVHTRGMPLS-EEINIENYAENTHGFVGADLATLTKESAMNALRR 414



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 29/303 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I      +    S+ L   KGVL++GPPGTGKT LA+  A+++  N
Sbjct: 468 VGGLEDTKERLRETIQWPLEYEDVFESMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSN 527

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             +V GPE++++  GESE+ + EVF  A ++AP VVF DE+D+IA  R  G  +  + +R
Sbjct: 528 FISVKGPELLNKFVGESEKGVREVFSKARENAPTVVFFDEIDSIAGERGGGTTDSGVGER 587

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+V+A TNRPD I+ AL RPGRLDR + +              
Sbjct: 588 VVSQLLTELDGIEDMENVVVVATTNRPDLIDDALLRPGRLDRHVHV-------------- 633

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            VP    R  I    +   +  L D  +++ L+  T G+VGAD+ A+  EA++   R + 
Sbjct: 634 PVPDEEARRAIFQ--VHTRDKPLADGVDLDELASRTDGYVGADIEAVAREASMAATREFI 691

Query: 649 KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD-------CLDSASPCTSDL 701
                 D+  S   +     H +  L  S+   ++TE +R+         D A P  +D 
Sbjct: 692 NSVDPEDIGDSVSNVRVTMDHFEHAL--SEVGPSVTEETRERYDEIEQRFDRAEPGVTDE 749

Query: 702 PTS 704
            T+
Sbjct: 750 STA 752


>gi|409722503|ref|ZP_11269951.1| ATPase AAA [Halococcus hamelinensis 100A6]
 gi|448724478|ref|ZP_21706985.1| ATPase AAA [Halococcus hamelinensis 100A6]
 gi|445785795|gb|EMA36581.1| ATPase AAA [Halococcus hamelinensis 100A6]
          Length = 754

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 140/307 (45%), Positives = 198/307 (64%), Gaps = 16/307 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   D + A   + PSA+REV +EVP   WE+VGG  E K +L E V+WP  + E F
Sbjct: 431  SLQVTRDDMKSALKGIEPSALREVFVEVPDTSWENVGGLEETKERLRETVQWPLDYPEVF 490

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + +      G++M+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 491  EAMDMNAAKGVMMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKFVGESEKGVREVF 550

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            +KAR NAP+++FFDEID +A  RG+ ++   V +RV+SQLL ELDGL +  +V VIA +N
Sbjct: 551  SKARENAPTVVFFDEIDSIAGERGQHANDSGVGERVVSQLLTELDGLEELEDVVVIATSN 610

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  RE IF +H R  P + DV++ +LA  +EG  G
Sbjct: 611  RPDLIDSALLRPGRLDRHVHVPVPDEEGREAIFEVHTRNKPLADDVDLADLARRTEGYVG 670

Query: 982  ADISLICREAAISAIEE------------NLDASRITMQHLKTAIRHVQPSEI----HSY 1025
            ADI  + REAA++A  E            N+   RI ++H   A+  V PS        Y
Sbjct: 671  ADIEAVTREAAMAATRELIEMSDPEDLAGNVGNVRIGVEHFDQALDEVNPSVTAETRERY 730

Query: 1026 KELSAKF 1032
            + + ++F
Sbjct: 731  ENIESRF 737



 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 166/266 (62%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG      Q+ E +E P +H E FK++G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 186  PSVAYEDIGGLDRELEQVREMIELPMRHPELFKQLGIDPPKGVLLHGPPGTGKTLIAKAV 245

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N P+I+F DEID +A  R   S 
Sbjct: 246  ANEIDAHFETISGPEIMSKYYGESEEQLREIFDEAEENEPAIVFIDEIDSIAPKRDDTSG 305

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++  
Sbjct: 306  --DVERRVVAQLLSLMDGLEERGQVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKEG 363

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN 999
            R+EI ++H R +P    +++   A  + G  G+D+  + +E+A++A+          EE 
Sbjct: 364  RKEILQVHTRGMPLEEGIDLDTYAESTHGFVGSDLESLAKESAMNALRRIRPELDLDEEE 423

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T   +K+A++ ++PS
Sbjct: 424  IDAEVLESLQVTRDDMKSALKGIEPS 449



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/238 (46%), Positives = 149/238 (62%), Gaps = 22/238 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDRELEQVREMIELPMRHPELFKQLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+FD A ++ PA+VFIDE+D+IAP R D   ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREIFDEAEENEPAIVFIDEIDSIAPKRDDTSGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERGQVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   E   LD+  E    +THGFVG+DL +L  E+A+  LRR
Sbjct: 359 PDKEGRKEILQVHTRGMPLEEGIDLDTYAE----STHGFVGSDLESLAKESAMNALRR 412



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 152/282 (53%), Gaps = 24/282 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    L++ +           ++ +   KGV+++GPPGTGKT LA+  A+++  N
Sbjct: 466 VGGLEETKERLRETVQWPLDYPEVFEAMDMNAAKGVMMYGPPGTGKTLLAKAVANEAQSN 525

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR----KDGGEELS 527
             ++ GPE++++  GESE+ + EVF  A ++AP VVF DE+D+IA  R     D G  + 
Sbjct: 526 FISIKGPELLNKFVGESEKGVREVFSKARENAPTVVFFDEIDSIAGERGQHANDSG--VG 583

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+VIA +NRPD I+ AL RPGRLDR + +            
Sbjct: 584 ERVVSQLLTELDGLEELEDVVVIATSNRPDLIDSALLRPGRLDRHVHV------------ 631

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
              VP    R E +  + +  +    D ++  L+  T G+VGAD+ A+  EAA+   R  
Sbjct: 632 --PVPDEEGR-EAIFEVHTRNKPLADDVDLADLARRTEGYVGADIEAVTREAAMAATREL 688

Query: 648 SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 689
            ++    D+  + G +     H D  L + + S  +T  +R+
Sbjct: 689 IEMSDPEDLAGNVGNVRIGVEHFDQALDEVNPS--VTAETRE 728


>gi|448711977|ref|ZP_21701520.1| ATPase AAA [Halobiforma nitratireducens JCM 10879]
 gi|445791062|gb|EMA41711.1| ATPase AAA [Halobiforma nitratireducens JCM 10879]
          Length = 755

 Score =  283 bits (723), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 138/284 (48%), Positives = 189/284 (66%), Gaps = 12/284 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A   ++PSAMREV +EVP   WEDVGG  + K +L E ++WP  + E F+++    
Sbjct: 439  DFKDALKGIQPSAMREVFVEVPDTTWEDVGGLGDTKERLRETIQWPLDYPEVFEQMDMEA 498

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 499  AKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKYVGESEKGVREVFEKARSNA 558

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 559  PTVIFFDEIDSIAGERGQRQADSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDN 618

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R++IF +H R  P +  V++  LA  +EG  GADI  +C
Sbjct: 619  ALLRPGRLDRHVHVPVPDEDARKKIFEVHTRDKPLADAVDLDWLAAETEGYVGADIEAVC 678

Query: 989  REAAISAIEE------------NLDASRITMQHLKTAIRHVQPS 1020
            REA+++A  E             ++  RI+  H + A+  V PS
Sbjct: 679  REASMAASREFINSVDPEEMGDTIENVRISKDHFEHALEEVNPS 722



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 168/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP+V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 186  VPEVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 245

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+IIF DE+D +AA R  E 
Sbjct: 246  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR--EE 303

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 304  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEIGVPDKE 363

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------E 998
             R+EI ++H R +P    V++   A  + G  GAD+  + RE A++A+           E
Sbjct: 364  GRKEILQVHTRGMPLEEAVDLEHYAANTHGFVGADLESLAREGAMNALRRIRPDLDLETE 423

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T    K A++ +QPS
Sbjct: 424  EIDADVLESLQVTEDDFKDALKGIQPS 450



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 109/237 (45%), Positives = 150/237 (63%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 194 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 253

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 254 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKREEAGGDVERRVV 313

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 314 AQLLSLMDGLEERGRVTVIAATNRLDDIDPALRRGGRFDREIEI--------------GV 359

Query: 592 PSPAQRLEILHALLSGM--EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  E ++   ++E+ +  THGFVGADL +L  E A+  LRR
Sbjct: 360 PDKEGRKEILQVHTRGMPLEEAV---DLEHYAANTHGFVGADLESLAREGAMNALRR 413



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 149/270 (55%), Gaps = 28/270 (10%)

Query: 385 KSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLR 442
           K   +G  P+A  E F  V  T  +D+   GGL      L++ I            + + 
Sbjct: 441 KDALKGIQPSAMREVFVEVPDTTWEDV---GGLGDTKERLRETIQWPLDYPEVFEQMDME 497

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
             KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + EVF+ A  +
Sbjct: 498 AAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKYVGESEKGVREVFEKARSN 557

Query: 503 APAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           AP V+F DE+D+IA  R     D G  + +R+V+ LL  +DG+   + V+VIA TNRPD 
Sbjct: 558 APTVIFFDEIDSIAGERGQRQADSG--VGERVVSQLLTELDGLEELEDVVVIATTNRPDL 615

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EV 617
           I+ AL RPGRLDR + +               VP    R +I    +   +  L D+ ++
Sbjct: 616 IDNALLRPGRLDRHVHV--------------PVPDEDARKKIFE--VHTRDKPLADAVDL 659

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRRY 647
           ++L+  T G+VGAD+ A+C EA++   R +
Sbjct: 660 DWLAAETEGYVGADIEAVCREASMAASREF 689


>gi|344303664|gb|EGW33913.1| hypothetical protein SPAPADRAFT_148144 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 750

 Score =  283 bits (723), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 129/259 (49%), Positives = 189/259 (72%), Gaps = 4/259 (1%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            +RPSAMRE++LE+PKV W D+GGQ E+K +L+E V+ P +   +F ++G   P G+L++G
Sbjct: 469  IRPSAMREILLEMPKVHWTDIGGQHELKQKLIEVVQLPLQASASFSKLGISAPKGVLLYG 528

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPGCSKTL A+A+A+E+GLNFLAVKGPE+F+K+VGESE+ +R +F KARA +PSIIFFDE
Sbjct: 529  PPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERTIREIFRKARAASPSIIFFDE 588

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A++R   +D    S  V++ LL E+DG+ +   V +I ATN+P  IDPALLRPGR 
Sbjct: 589  IDAIASVRDSSTDA---SSNVLTSLLNEIDGVEELKGVVIIGATNKPSDIDPALLRPGRL 645

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCTGADISLICREAAISA 995
            DR +YV PP+   R +I      K     ++V++++LA L+EGC+GA+++L+C+EA ++A
Sbjct: 646  DRHIYVAPPDFEARVQILEKCCSKFDLDQNEVDLQQLAKLTEGCSGAEVTLLCQEAGLAA 705

Query: 996  IEENLDASRITMQHLKTAI 1014
            I E+   S +  +H   A+
Sbjct: 706  IMEDNQCSTVHKRHFDHAL 724



 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 149/242 (61%), Gaps = 21/242 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL+K+  +L+  I       TL S  G+ P +G+LLHGPPGTGKT L R  A+ S 
Sbjct: 218 TSVGGLTKQIQLLQQTISLPLHSPTLFSDFGISPPRGILLHGPPGTGKTMLLRCAANTSN 277

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELS 527
            ++ T+NGP +VS+  GE+E  + ++F  A +  P+++F+DE+DA+ P+R   D GE  S
Sbjct: 278 AHVLTINGPSIVSKYLGETENTIRDIFAEARKYQPSIIFMDEIDALVPSRTGSDAGETES 337

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
            R+VA LL +MDG+     V+++ ATNRP+SI+ ALRRPGR D E+EI            
Sbjct: 338 -RVVAQLLTMMDGMDNGGRVVIVGATNRPNSIDIALRRPGRFDTEVEI------------ 384

Query: 588 PAAVPSPAQRLEILHALLSGMEH---SLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
              +P    R +IL  L   M H   SL  SE+E ++  THG+VGADL+ALC EA +  +
Sbjct: 385 --GIPDIDARTDILSKLFDRMNHDKYSLTKSEIELVASKTHGYVGADLSALCREAVMNAI 442

Query: 645 RR 646
           ++
Sbjct: 443 KQ 444



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 141/260 (54%), Gaps = 13/260 (5%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +  VGG  +    L + +  P      F   G  PP GIL+ GPPG  KT++ R  A+
Sbjct: 215  ITYTSVGGLTKQIQLLQQTISLPLHSPTLFSDFGISPPRGILLHGPPGTGKTMLLRCAAN 274

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
             +  + L + GP + SK++GE+E  +R +FA+AR   PSIIF DEID L   R   SD  
Sbjct: 275  TSNAHVLTINGPSIVSKYLGETENTIRDIFAEARKYQPSIIFMDEIDALVPSR-TGSDAG 333

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                RV++QLL  +DG+     V ++ ATNRP+ ID AL RPGRFD  + +G P+   R 
Sbjct: 334  ETESRVVAQLLTMMDGMDNGGRVVIVGATNRPNSIDIALRRPGRFDTEVEIGIPDIDART 393

Query: 952  EIF-----RIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 1003
            +I      R++  K   +    I  +A  + G  GAD+S +CREA ++AI++ L      
Sbjct: 394  DILSKLFDRMNHDKYSLTKS-EIELVASKTHGYVGADLSALCREAVMNAIKQGLAQGTPQ 452

Query: 1004 ---RITMQHLKTAIRHVQPS 1020
               ++T+ HL  A   ++PS
Sbjct: 453  HEIKVTVDHLLAAYPDIRPS 472



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 153/284 (53%), Gaps = 35/284 (12%)

Query: 380 LNAVSKSLREGTLPNAQIE---------FQNVQATVEQDI---------SKLGGLSKEYA 421
           +NA+ + L +GT P  +I+         + +++ +  ++I         + +GG  +   
Sbjct: 439 MNAIKQGLAQGT-PQHEIKVTVDHLLAAYPDIRPSAMREILLEMPKVHWTDIGGQHELKQ 497

Query: 422 ILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEV 480
            L +++ +     ++ S LG+   KGVLL+GPPG  KT  A+  A +SG+N   V GPE+
Sbjct: 498 KLIEVVQLPLQASASFSKLGISAPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEI 557

Query: 481 VSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDG 540
            ++  GESE+ + E+F  A  ++P+++F DE+DAIA  R D   + S  ++ +LLN +DG
Sbjct: 558 FNKYVGESERTIREIFRKARAASPSIIFFDEIDAIASVR-DSSTDASSNVLTSLLNEIDG 616

Query: 541 VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI 600
           V    GV++I ATN+P  I+PAL RPGRLDR I +              A P    R++I
Sbjct: 617 VEELKGVVIIGATNKPSDIDPALLRPGRLDRHIYV--------------APPDFEARVQI 662

Query: 601 LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
           L    S  +    + +++ L+  T G  GA++  LC EA L  +
Sbjct: 663 LEKCCSKFDLDQNEVDLQQLAKLTEGCSGAEVTLLCQEAGLAAI 706


>gi|448666749|ref|ZP_21685394.1| cell division control protein 48/AAA family ATPase [Haloarcula
            amylolytica JCM 13557]
 gi|445771880|gb|EMA22936.1| cell division control protein 48/AAA family ATPase [Haloarcula
            amylolytica JCM 13557]
          Length = 757

 Score =  283 bits (723), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 137/302 (45%), Positives = 195/302 (64%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   + PSA+REV +EVP V W+ VGG  + K +L E ++WP ++++ F+ +    
Sbjct: 440  DFREAMKGIEPSALREVFVEVPDVTWDSVGGLEDTKERLRETIQWPLEYEDVFESMDLEA 499

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF++VKGPEL +K+VGESEK VR +F+KAR NA
Sbjct: 500  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKFVGESEKGVREVFSKARENA 559

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  RG  +    V +RV+SQLL ELDG+    NV V+A TNRPD ID 
Sbjct: 560  PTVVFFDEIDSIAGERGGGTTDSGVGERVVSQLLTELDGIEDMENVVVVATTNRPDLIDD 619

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R  IF++H R  P +  V++ +LA  ++G  GADI  + 
Sbjct: 620  ALLRPGRLDRHVHVPVPDEEARRAIFQVHTRDKPLADGVDLDDLASRTDGYVGADIEAVA 679

Query: 989  REAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEIHS----YKELSAKF 1032
            REA+++A  E +++             R+TM H + A+  V PS        Y E+  +F
Sbjct: 680  REASMAATREFINSVDPEDIGDSVSNVRVTMDHFEHALEEVGPSVTEETRERYDEIEQRF 739

Query: 1033 QR 1034
             R
Sbjct: 740  DR 741



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 111/268 (41%), Positives = 167/268 (62%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            + P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+
Sbjct: 186  DTPDVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAK 245

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E    F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DEID +A  RG E
Sbjct: 246  AVANEIDAYFTTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKRG-E 304

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            + G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P++
Sbjct: 305  TQG-DVERRVVAQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEIGVPDK 363

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P + ++NI   A  + G  GAD++ + +E+A++A+           
Sbjct: 364  EGRKEILQVHTRGMPLAEEINIENYAENTHGFVGADLATLTKESAMNALRRIRPELDLES 423

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+   I+ +  + A++ ++PS
Sbjct: 424  DEIDAEVLERLEISDKDFREAMKGIEPS 451



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 148/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 195 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAY 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FTTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKRGETQGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  +  +  +E  +  THGFVGADLA L  E+A+  LRR
Sbjct: 361 PDKEGRKEILQVHTRGMPLA-EEINIENYAENTHGFVGADLATLTKESAMNALRR 414



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 29/303 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I      +    S+ L   KGVL++GPPGTGKT LA+  A+++  N
Sbjct: 468 VGGLEDTKERLRETIQWPLEYEDVFESMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSN 527

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             +V GPE++++  GESE+ + EVF  A ++AP VVF DE+D+IA  R  G  +  + +R
Sbjct: 528 FISVKGPELLNKFVGESEKGVREVFSKARENAPTVVFFDEIDSIAGERGGGTTDSGVGER 587

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+V+A TNRPD I+ AL RPGRLDR + +              
Sbjct: 588 VVSQLLTELDGIEDMENVVVVATTNRPDLIDDALLRPGRLDRHVHV-------------- 633

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            VP    R  I    +   +  L D  +++ L+  T G+VGAD+ A+  EA++   R + 
Sbjct: 634 PVPDEEARRAIFQ--VHTRDKPLADGVDLDDLASRTDGYVGADIEAVAREASMAATREFI 691

Query: 649 KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD-------CLDSASPCTSDL 701
                 D+  S   +     H +  L++   S  +TE +R+         D A P  +D 
Sbjct: 692 NSVDPEDIGDSVSNVRVTMDHFEHALEEVGPS--VTEETRERYDEIEQRFDRAEPGVTDE 749

Query: 702 PTS 704
            T+
Sbjct: 750 STA 752


>gi|269986895|gb|EEZ93171.1| Microtubule-severing ATPase [Candidatus Parvarchaeum acidiphilum
            ARMAN-4]
          Length = 763

 Score =  282 bits (722), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 136/290 (46%), Positives = 201/290 (69%), Gaps = 7/290 (2%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   VRPSAMREV++E P V W DVGG  +VK QL EA++WP KH ++F+R+G  P
Sbjct: 461  DFREALRFVRPSAMREVLVERPSVGWADVGGLEQVKAQLKEAIDWPLKHPDSFRRVGITP 520

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPG  KTL+ARAVA E   NF+A+KGPE+++K+VGESEK +R +F KAR  +
Sbjct: 521  PKGILLYGPPGTGKTLLARAVAHETESNFIAIKGPEIYNKYVGESEKRIREIFDKARQVS 580

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSIIF DE+D +A+ R    +G + +++V++QLL ELDG+    NV VI ATNR DK+D 
Sbjct: 581  PSIIFIDELDSIASSRSN-YEGNNATEQVVNQLLTELDGIEPLNNVIVIGATNRVDKVDS 639

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN--IRELACLSEGCTGADISL 986
            A+LR GRFD +++V PP+E  R++I +++L K+P   D    I  L   +EG  G+D+  
Sbjct: 640  AILRTGRFDNIVFVPPPDEDGRKDILKVYLNKMPIEGDKEALIDYLIKKTEGYVGSDLER 699

Query: 987  ICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            + +EA ++A+  ++ AS++T +  + A+  V+PS    +   Y+E++ K 
Sbjct: 700  LSKEAGMNALRNSISASKVTKEDFEKALDLVRPSLTTEDAKKYEEMAKKL 749



 Score =  246 bits (628), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 127/268 (47%), Positives = 168/268 (62%), Gaps = 18/268 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            V  V +EDVGG  +  +++ E VE P KH E F R+G  PP G+L++GPPG  KTL+ARA
Sbjct: 207  VKHVSYEDVGGLSDEVSKIREMVEMPLKHPEIFMRLGITPPRGVLLYGPPGTGKTLLARA 266

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA E+  +F+ + GPE+ SKWVG++EK +R +F  A  NAPSIIF DEID +A  R +ES
Sbjct: 267  VADESEAHFITINGPEVMSKWVGDAEKKLREIFDDAEKNAPSIIFIDEIDAIATKR-EES 325

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV+SQLL  +DGL  R  V VIAATNRP+ IDPAL RPGRFDR +  G PNE 
Sbjct: 326  IG-EVEHRVVSQLLTLMDGLRSRGKVIVIAATNRPNAIDPALRRPGRFDREIMFGVPNEK 384

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN--------- 999
             R EI  IH R +P   +V + E++ ++ G  GADI  + +EAA++ I  N         
Sbjct: 385  GRLEILNIHTRNMPLDKNVKLEEISKITHGFVGADIESLIKEAAMNVIRRNINELNVKEG 444

Query: 1000 -------LDASRITMQHLKTAIRHVQPS 1020
                   L+   +TM   + A+R V+PS
Sbjct: 445  DNIPKTVLEKLIVTMDDFREALRFVRPS 472



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/237 (45%), Positives = 153/237 (64%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGLS E + +++++ +          LG+ P +GVLL+GPPGTGKT LAR  A +S  +
Sbjct: 215 VGGLSDEVSKIREMVEMPLKHPEIFMRLGITPPRGVLLYGPPGTGKTLLARAVADESEAH 274

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T+NGPEV+S+  G++E+ L E+FD A ++AP+++FIDE+DAIA  R++   E+  R+V
Sbjct: 275 FITINGPEVMSKWVGDAEKKLREIFDDAEKNAPSIIFIDEIDAIATKREESIGEVEHRVV 334

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VIAATNRP++I+PALRRPGR DREI      +F         V
Sbjct: 335 SQLLTLMDGLRSRGKVIVIAATNRPNAIDPALRRPGRFDREI------MF--------GV 380

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGFVGADLAALCNEAALVCLRR 646
           P+   RLEIL+     M    LD  V  E +S  THGFVGAD+ +L  EAA+  +RR
Sbjct: 381 PNEKGRLEILNIHTRNMP---LDKNVKLEEISKITHGFVGADIESLIKEAAMNVIRR 434



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/245 (37%), Positives = 141/245 (57%), Gaps = 31/245 (12%)

Query: 411 SKLGGLSKEYAILKDIIISSSVK--STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           + +GGL +  A LK+ I    +K   +   +G+ P KG+LL+GPPGTGKT LAR  AH++
Sbjct: 487 ADVGGLEQVKAQLKEAI-DWPLKHPDSFRRVGITPPKGILLYGPPGTGKTLLARAVAHET 545

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD-GGEELS 527
             N   + GPE+ ++  GESE+ + E+FD A Q +P+++FIDELD+IA +R +  G   +
Sbjct: 546 ESNFIAIKGPEIYNKYVGESEKRIREIFDKARQVSPSIIFIDELDSIASSRSNYEGNNAT 605

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +++V  LL  +DG+   + V+VI ATNR D ++ A+ R GR D       + +F      
Sbjct: 606 EQVVNQLLTELDGIEPLNNVIVIGATNRVDKVDSAILRTGRFD-------NIVF------ 652

Query: 588 PAAVPSPAQ--RLEILHALLSGM-----EHSLLDSEVEYLSMATHGFVGADLAALCNEAA 640
              VP P +  R +IL   L+ M     + +L+D    YL   T G+VG+DL  L  EA 
Sbjct: 653 ---VPPPDEDGRKDILKVYLNKMPIEGDKEALID----YLIKKTEGYVGSDLERLSKEAG 705

Query: 641 LVCLR 645
           +  LR
Sbjct: 706 MNALR 710


>gi|392374078|ref|YP_003205911.1| Vesicle-fusing ATPase [Candidatus Methylomirabilis oxyfera]
 gi|258591771|emb|CBE68072.1| putative Vesicle-fusing ATPase [Candidatus Methylomirabilis oxyfera]
          Length = 760

 Score =  282 bits (722), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 136/292 (46%), Positives = 195/292 (66%), Gaps = 4/292 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A  ++RPSA+RE+++EVP+V W DVGG  +VK  L E VE P  H +AF+R+G +P
Sbjct: 458  DFNQALRRIRPSALRELLIEVPRVTWSDVGGLADVKRALRETVELPLTHPQAFERLGIKP 517

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+EA  NF+  KG +L SKW GESE+ +R  FAKAR  A
Sbjct: 518  PKGVLLYGPPGTGKTLLAKAVANEAKANFMLAKGSDLLSKWYGESEQRIREFFAKARQVA 577

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+FFDE+D L   RG  +    V++R+++QLL ELDGL +   V ++ ATNRPD IDP
Sbjct: 578  PAIVFFDEVDALVPRRGTAAGEPHVTERIVNQLLSELDGLEELRGVVILGATNRPDLIDP 637

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+YV  P+   R EI  +H R +  + DV++++L   ++  TGAD++LIC
Sbjct: 638  ALLRPGRFDALVYVPVPDAAARHEILAVHTRHMALADDVDLKDLVRRTDRFTGADLALIC 697

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHS----YKELSAKFQRLV 1036
              AA  A+ ++L+A  +T      A+    PS   +    Y E+  + ++ V
Sbjct: 698  MRAAQLALRKDLEAKAVTHADFLAALAETLPSVTEAMEREYAEVGKRLRQAV 749



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 114/284 (40%), Positives = 175/284 (61%), Gaps = 19/284 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P + ++D+GG  +V  ++ E VE P KH E F R+G  PP G+L+ GPPG  KTL+A+A
Sbjct: 205  LPDITYDDIGGLGDVINEIREVVELPLKHPELFDRLGIAPPKGVLLHGPPGTGKTLLAQA 264

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            +A+EA  +F  + GPE+  ++ GESE+ +R++F + + N P+IIF DE+D +A  R  E+
Sbjct: 265  LANEAKAHFATINGPEIMGRFYGESEERLRAIFQEGQENPPAIIFIDELDSIAPKR--EA 322

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                V  RV++QLL  +DGL  R NV VI ATNR   ID AL RPGRFDR + +  PN  
Sbjct: 323  VMGEVERRVVAQLLTLMDGLTPRGNVIVIGATNRVGAIDLALRRPGRFDREIELRVPNRN 382

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQ 1008
             R +I  IH R +P + DVN+  +A L+ GC G+D++ +CREAA++A+   L    + ++
Sbjct: 383  GRRQILTIHTRAMPLAPDVNLDWVADLTHGCVGSDLAALCREAALNALRRILPELDLRLE 442

Query: 1009 HLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQLRPS 1052
                      P+E+          QRLV ++ + +++  ++RPS
Sbjct: 443  TF--------PAEV---------LQRLVVTHEDFNQALRRIRPS 469



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/279 (40%), Positives = 158/279 (56%), Gaps = 31/279 (11%)

Query: 368 INHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII 427
           IN +T+V L P         +E  LP+   +          DI  LG +  E   + ++ 
Sbjct: 185 INPQTEVELLPEF----VETKEAHLPDITYD----------DIGGLGDVINEIREVVELP 230

Query: 428 ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGE 487
           +          LG+ P KGVLLHGPPGTGKT LA+  A+++  +  T+NGPE++ + YGE
Sbjct: 231 LKHP--ELFDRLGIAPPKGVLLHGPPGTGKTLLAQALANEAKAHFATINGPEIMGRFYGE 288

Query: 488 SEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGV 547
           SE+ L  +F    ++ PA++FIDELD+IAP R+    E+ +R+VA LL LMDG+     V
Sbjct: 289 SEERLRAIFQEGQENPPAIIFIDELDSIAPKREAVMGEVERRVVAQLLTLMDGLTPRGNV 348

Query: 548 LVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSG 607
           +VI ATNR  +I+ ALRRPGR DREIE+               VP+   R +IL      
Sbjct: 349 IVIGATNRVGAIDLALRRPGRFDREIEL--------------RVPNRNGRRQILTIHTRA 394

Query: 608 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           M  +  D  +++++  THG VG+DLAALC EAAL  LRR
Sbjct: 395 MPLA-PDVNLDWVADLTHGCVGSDLAALCREAALNALRR 432



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/297 (36%), Positives = 154/297 (51%), Gaps = 33/297 (11%)

Query: 366 FVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKD 425
            V+ HE         N   + +R   L    IE   V        S +GGL+     L++
Sbjct: 452 LVVTHED-------FNQALRRIRPSALRELLIEVPRVT------WSDVGGLADVKRALRE 498

Query: 426 II-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQN 484
            + +  +       LG++P KGVLL+GPPGTGKT LA+  A+++  N     G +++S+ 
Sbjct: 499 TVELPLTHPQAFERLGIKPPKGVLLYGPPGTGKTLLAKAVANEAKANFMLAKGSDLLSKW 558

Query: 485 YGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVC 542
           YGESEQ + E F  A Q APA+VF DE+DA+ P R     E  +++R+V  LL+ +DG+ 
Sbjct: 559 YGESEQRIREFFAKARQVAPAIVFFDEVDALVPRRGTAAGEPHVTERIVNQLLSELDGLE 618

Query: 543 RTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILH 602
              GV+++ ATNRPD I+PAL RPGR D  + +               VP  A R EIL 
Sbjct: 619 ELRGVVILGATNRPDLIDPALLRPGRFDALVYV--------------PVPDAAARHEILA 664

Query: 603 ALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR--YSKIQTSSDVL 657
                M  +  D +++ L   T  F GADLA +C  AA + LR+   +K  T +D L
Sbjct: 665 VHTRHMALA-DDVDLKDLVRRTDRFTGADLALICMRAAQLALRKDLEAKAVTHADFL 720


>gi|448314301|ref|ZP_21504000.1| ATPase AAA [Natronolimnobius innermongolicus JCM 12255]
 gi|445595413|gb|ELY49522.1| ATPase AAA [Natronolimnobius innermongolicus JCM 12255]
          Length = 755

 Score =  282 bits (721), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 141/306 (46%), Positives = 198/306 (64%), Gaps = 16/306 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            LK+   DF++A   ++PSAMREV +EVP V W DVGG    K +L E V+WP  + E F 
Sbjct: 433  LKVTENDFKEALKGIQPSAMREVFVEVPDVTWNDVGGLEGTKERLRENVQWPLDYPEVFD 492

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++  +   G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F 
Sbjct: 493  QLDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVREVFE 552

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR+NAP++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNR
Sbjct: 553  KARSNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTNR 612

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR ++V  P+E  R++IF +H R  P +  V++  LA  +EG  GA
Sbjct: 613  PDLIDSALLRPGRLDRHVHVPVPDEDARKKIFEVHTRNKPLADAVDLDWLAAETEGYVGA 672

Query: 983  DISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPSEI----HSYK 1026
            D+  +CREA++ A            I++ +   R++ +H + A+  V  S        Y+
Sbjct: 673  DVEAVCREASMQASREFINSVEPDDIDDTIGNVRLSKEHFEHALEEVNASVTAETRERYE 732

Query: 1027 ELSAKF 1032
            E+  +F
Sbjct: 733  EIEQEF 738



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 168/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 186  VPNVTYEDIGGLDSELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 245

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+IIF DE+D +AA R  E 
Sbjct: 246  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR--EE 303

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 304  AGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEIGVPDKD 363

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EE 998
             R+EI ++H R +P S  +++   A  + G  GAD+  + RE A++A+          E+
Sbjct: 364  GRKEILQVHTRGMPLSESIDLDRYAENTHGFVGADLESLTREGAMNALRRIRPDLDLEED 423

Query: 999  NLDAS-----RITMQHLKTAIRHVQPS 1020
             +DA      ++T    K A++ +QPS
Sbjct: 424  EIDAEVLETLKVTENDFKEALKGIQPS 450



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/236 (46%), Positives = 149/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 194 IGGLDSELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 253

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 254 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKREEAGGDVERRVV 313

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D I+PALRR GR DREIEI               V
Sbjct: 314 AQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEI--------------GV 359

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L +S +++  +  THGFVGADL +L  E A+  LRR
Sbjct: 360 PDKDGRKEILQVHTRGM--PLSESIDLDRYAENTHGFVGADLESLTREGAMNALRR 413



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 147/258 (56%), Gaps = 21/258 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               L ++  KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 490 VFDQLDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVGESEKGVRE 549

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF+ A  +AP V+F DE+D+IA  R  + G   + +R+V+ LL  +DG+   + V+VIA 
Sbjct: 550 VFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIAT 609

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R +I    +      L
Sbjct: 610 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDEDARKKIFE--VHTRNKPL 653

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSD 671
            D+ ++++L+  T G+VGAD+ A+C EA++   R +       D+  + G +   + H +
Sbjct: 654 ADAVDLDWLAAETEGYVGADVEAVCREASMQASREFINSVEPDDIDDTIGNVRLSKEHFE 713

Query: 672 TMLQDSDCSRNITESSRD 689
             L++ + S  +T  +R+
Sbjct: 714 HALEEVNAS--VTAETRE 729


>gi|448659284|ref|ZP_21683252.1| cell division control protein 48 [Haloarcula californiae ATCC 33799]
 gi|445760786|gb|EMA12043.1| cell division control protein 48 [Haloarcula californiae ATCC 33799]
          Length = 757

 Score =  282 bits (721), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 137/302 (45%), Positives = 194/302 (64%), Gaps = 16/302 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A   + PSA+REV +EVP V W+ VGG  + K +L E ++WP ++++ F+ +    
Sbjct: 440  DFREAMKGIEPSALREVFVEVPDVTWDSVGGLEDTKERLRETIQWPLEYEDVFESMDLEA 499

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+AVA+EA  NF++VKGPEL +K+VGESEK VR +F+KAR NA
Sbjct: 500  AKGVLMYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKFVGESEKGVREVFSKARENA 559

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  RG  +    V +RV+SQLL ELDG+    NV V+A TNRPD ID 
Sbjct: 560  PTVVFFDEIDSIAGERGGGTTDSGVGERVVSQLLTELDGIEDMENVVVVATTNRPDLIDD 619

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R  IF +H R  P +  V++ +LA  ++G  GADI  + 
Sbjct: 620  ALLRPGRLDRHVHVPVPDEDARRAIFHVHTRDKPLADGVDLDDLASRTDGYVGADIEAVA 679

Query: 989  REAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEIHS----YKELSAKF 1032
            REA+++A  E +++             R+TM H + A+  V PS        Y E+  +F
Sbjct: 680  REASMAATREFINSVDPEDIGDSVSNVRVTMDHFEHALEEVGPSVTEETRERYDEIEQRF 739

Query: 1033 QR 1034
             R
Sbjct: 740  DR 741



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 110/268 (41%), Positives = 166/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            + P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+
Sbjct: 186  DTPDVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAK 245

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E    F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  RG E
Sbjct: 246  AVANEIDAYFTTISGPEIMSKYYGESEEQLREVFDEASENSPAIVFIDEIDSIAPKRG-E 304

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            + G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P++
Sbjct: 305  TQG-DVERRVVAQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEIGVPDK 363

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P + ++NI   A  + G  GAD++ + +E A++A+           
Sbjct: 364  EGRKEILQVHTRGMPLAEEINIENYAENTHGFVGADLASLTKEGAMNALRRIRPELDLES 423

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+   I+ +  + A++ ++PS
Sbjct: 424  DEIDAEVLERLEISDKDFREAMKGIEPS 451



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/235 (46%), Positives = 149/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 195 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAY 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVFD AS+++PA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FTTISGPEIMSKYYGESEEQLREVFDEASENSPAIVFIDEIDSIAPKRGETQGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  +  +  +E  +  THGFVGADLA+L  E A+  LRR
Sbjct: 361 PDKEGRKEILQVHTRGMPLA-EEINIENYAENTHGFVGADLASLTKEGAMNALRR 414



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 159/303 (52%), Gaps = 29/303 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I      +    S+ L   KGVL++GPPGTGKT LA+  A+++  N
Sbjct: 468 VGGLEDTKERLRETIQWPLEYEDVFESMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSN 527

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             +V GPE++++  GESE+ + EVF  A ++AP VVF DE+D+IA  R  G  +  + +R
Sbjct: 528 FISVKGPELLNKFVGESEKGVREVFSKARENAPTVVFFDEIDSIAGERGGGTTDSGVGER 587

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+V+A TNRPD I+ AL RPGRLDR + +              
Sbjct: 588 VVSQLLTELDGIEDMENVVVVATTNRPDLIDDALLRPGRLDRHVHV-------------- 633

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            VP    R  I H  +   +  L D  +++ L+  T G+VGAD+ A+  EA++   R + 
Sbjct: 634 PVPDEDARRAIFH--VHTRDKPLADGVDLDDLASRTDGYVGADIEAVAREASMAATREFI 691

Query: 649 KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD-------CLDSASPCTSDL 701
                 D+  S   +     H +  L++   S  +TE +R+         D A P  +D 
Sbjct: 692 NSVDPEDIGDSVSNVRVTMDHFEHALEEVGPS--VTEETRERYDEIEQRFDRAEPGVTDE 749

Query: 702 PTS 704
            T+
Sbjct: 750 STA 752


>gi|452821805|gb|EME28831.1| AAA-type ATPase [Galdieria sulphuraria]
          Length = 814

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 136/248 (54%), Positives = 181/248 (72%), Gaps = 13/248 (5%)

Query: 749 DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
           D ++AR ++ PSAMRE+++EV +V W+D+GG  +VK QL EAVEWP+K+   F+R G  P
Sbjct: 567 DLQEARKEIFPSAMREIVVEVAQVCWDDIGGYHQVKQQLREAVEWPKKYAHYFRRFGISP 626

Query: 809 PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
             GIL++GPPGCSKTLMA+A+A+E   +FL+VKGPELF KWVGESEKAVR+LF KA++ A
Sbjct: 627 IKGILLYGPPGCSKTLMAKALANETNCHFLSVKGPELFQKWVGESEKAVRNLFRKAKSVA 686

Query: 869 PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELD-----GLHQRVN-------VTV 916
           P IIFFDEID LA+ R +E +      RV++QLL E+D     GL  RV+       + V
Sbjct: 687 PCIIFFDEIDALASRRQEEQNSSHAEQRVLAQLLTEMDGIASSGLMSRVDEEMEESWIFV 746

Query: 917 IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACL 975
           + ATNRPD +DPAL+RPGRFDRL+YVG P+   RE+I +IH R IP + S ++ + L  L
Sbjct: 747 LGATNRPDLLDPALIRPGRFDRLVYVGLPDSEAREQILKIHCRSIPLNDSSMDWKSLVEL 806

Query: 976 SEGCTGAD 983
           ++G TGAD
Sbjct: 807 TQGMTGAD 814



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 155/288 (53%), Gaps = 40/288 (13%)

Query: 381 NAVSKSLREGTLPNAQIEFQN-VQATVEQ-DISKLGGLSKEYAILKDIIIS----SSVKS 434
           NAV K ++     N QIE+   VQA  ++  +  LGGL ++   +K  + S       + 
Sbjct: 286 NAVWKVVK-----NTQIEWLPLVQADNKRTKLIALGGLDEQMNKMKSFLSSCCESEEYRE 340

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLF-TVNGPEVVSQNYGESEQALH 493
            LS LG+RP++G+LL+GPPGTGK++LA++ A    V    TV  P +VS  +GE+E  L 
Sbjct: 341 QLSRLGIRPSRGILLYGPPGTGKSTLAQVVASSMQVRCVRTVRAPWIVSSTFGETESTLM 400

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           E+F       P+++ IDE+DA+  +R      E   R+  +LL  +D + +   +++I  
Sbjct: 401 EIFQQVGDRVPSILIIDEIDALGVSRDSQFATEAELRLTGSLLRCIDQMPKR--MVLIGT 458

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALL------- 605
           T+R D+++ ALRRPGRLD E+E+              +VP+  QR  IL  ++       
Sbjct: 459 THRLDALDAALRRPGRLDMELEV--------------SVPNSCQRCSILREIIKSSTSLR 504

Query: 606 --SGM--EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
              GM  +  L D ++  ++   HG+VGAD+ AL  E+  +  +R+ +
Sbjct: 505 DEKGMTWQVELTDDDLLEVANDLHGYVGADILALWRESCYLAYKRWKQ 552



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 130/264 (49%), Gaps = 46/264 (17%)

Query: 386 SLREGTLPNAQIEFQNVQA--TVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRP 443
           ++RE  +  AQ+ + ++     V+Q + +     K+YA                  G+ P
Sbjct: 579 AMREIVVEVAQVCWDDIGGYHQVKQQLREAVEWPKKYA------------HYFRRFGISP 626

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
            KG+LL+GPPG  KT +A+  A+++  +  +V GPE+  +  GESE+A+  +F  A   A
Sbjct: 627 IKGILLYGPPGCSKTLMAKALANETNCHFLSVKGPELFQKWVGESEKAVRNLFRKAKSVA 686

Query: 504 PAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVC------RTD------GVLV 549
           P ++F DE+DA+A  R++        QR++A LL  MDG+       R D       + V
Sbjct: 687 PCIIFFDEIDALASRRQEEQNSSHAEQRVLAQLLTEMDGIASSGLMSRVDEEMEESWIFV 746

Query: 550 IAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME 609
           + ATNRPD ++PAL RPGR DR + +               +P    R +IL      + 
Sbjct: 747 LGATNRPDLLDPALIRPGRFDRLVYV--------------GLPDSEAREQILKIHCRSI- 791

Query: 610 HSLLDSEVEYLSMA--THGFVGAD 631
             L DS +++ S+   T G  GAD
Sbjct: 792 -PLNDSSMDWKSLVELTQGMTGAD 814



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 46/282 (16%)

Query: 795  QKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFL-AVKGPELFSKWVGES 853
            ++++E   R+G RP  GIL++GPPG  K+ +A+ VAS   +  +  V+ P + S   GE+
Sbjct: 336  EEYREQLSRLGIRPSRGILLYGPPGTGKSTLAQVVASSMQVRCVRTVRAPWIVSSTFGET 395

Query: 854  EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            E  +  +F +     PSI+  DEID L   R  +        R+   LL  +D + +R  
Sbjct: 396  ESTLMEIFQQVGDRVPSILIIDEIDALGVSRDSQF-ATEAELRLTGSLLRCIDQMPKR-- 452

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS-------- 965
            + +I  T+R D +D AL RPGR D  L V  PN   R  I    LR+I  SS        
Sbjct: 453  MVLIGTTHRLDALDAALRRPGRLDMELEVSVPNSCQRCSI----LREIIKSSTSLRDEKG 508

Query: 966  --------DVNIRELACLSEGCTGADISLICREA-----------------AISAIEENL 1000
                    D ++ E+A    G  GADI  + RE+                 AIS ++E+L
Sbjct: 509  MTWQVELTDDDLLEVANDLHGYVGADILALWRESCYLAYKRWKQGKALECRAISVLKEDL 568

Query: 1001 DASRI-----TMQHLKTAIRHVQPSEIHSYKELSAKFQRLVH 1037
              +R       M+ +   +  V   +I  Y ++  + +  V 
Sbjct: 569  QEARKEIFPSAMREIVVEVAQVCWDDIGGYHQVKQQLREAVE 610


>gi|330508645|ref|YP_004385073.1| AAA family ATPase [Methanosaeta concilii GP6]
 gi|328929453|gb|AEB69255.1| AAA family ATPase, CDC48 subfamily [Methanosaeta concilii GP6]
          Length = 725

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 139/300 (46%), Positives = 204/300 (68%), Gaps = 17/300 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  K+ PSAMREV +EV +V W++VGG  E K  L+EAVEWP  + EAF  +G RP
Sbjct: 427  DFLSALKKIEPSAMREVFVEVAQVHWDEVGGLDEAKRSLVEAVEWPLMYPEAFASVGVRP 486

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++G PG  KTL+ RA+A+E+ +NF++VKGPEL SKWVGESE+AVR +F KAR  A
Sbjct: 487  PRGILLYGLPGTGKTLLVRALATESNVNFISVKGPELLSKWVGESERAVREIFRKARQAA 546

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +   RG  SD   V++RV+SQ L E+DGL +  +V ++AATNRPD +D 
Sbjct: 547  PALVFFDEIDSIVPARGSGSDS-HVTERVVSQFLTEMDGLMELKDVVIVAATNRPDLLDS 605

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            +LLRPGRFDRL+Y+  P++  R++I  I+L K+P + +V+ + LA ++E  +GAD+ ++C
Sbjct: 606  SLLRPGRFDRLVYIPMPDKEARQKILEIYLSKMP-AYEVSAQWLADITENFSGADLEMLC 664

Query: 989  REAAISAIEENL-----------DASRITMQHLKTAIRHVQP----SEIHSYKELSAKFQ 1033
            REA + A+ E++           D   +T +  + A  +++P      +  Y ++  +FQ
Sbjct: 665  REAGMLALREHIRPGMKREELIVDKILVTEKRFQEASEYIRPHLSKDMLQGYTKMIREFQ 724



 Score =  216 bits (549), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 114/244 (46%), Positives = 164/244 (67%), Gaps = 22/244 (9%)

Query: 408 QDIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
           +DIS   +GGLS+E   ++++I +        S LG+ P +GVLLHGPPGTGKT +AR  
Sbjct: 176 RDISYEDIGGLSREIREIREMIEVPLRHPELFSRLGINPPRGVLLHGPPGTGKTLIARAV 235

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE 524
           A ++  N  +++GPE+VS+ YGESEQ L ++FD AS++AP+++FIDE+D+IAP R++   
Sbjct: 236 AGETDANFISISGPEIVSKFYGESEQRLRQIFDEASKAAPSIIFIDEIDSIAPKREEVSG 295

Query: 525 ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
           +L +R+VA +L+LMDG+     V+VIAATNRP++++PA+RR GR DREIEI         
Sbjct: 296 DLERRVVAQILSLMDGLSSRGEVIVIAATNRPNALDPAIRRGGRFDREIEI--------- 346

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALV 642
                 +P+   RLE+L+    GM    LD  ++ + +A  THGFVGADL ALC EAA+ 
Sbjct: 347 -----GIPNRNGRLEVLYVHTRGMP---LDESLDLMEIADSTHGFVGADLYALCKEAAMR 398

Query: 643 CLRR 646
            L R
Sbjct: 399 TLER 402



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/272 (41%), Positives = 169/272 (62%), Gaps = 18/272 (6%)

Query: 764  EVILEVPKVKWEDVGG-QREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            E+ L V  + +ED+GG  RE++ ++ E +E P +H E F R+G  PP G+L+ GPPG  K
Sbjct: 170  ELALHVRDISYEDIGGLSREIR-EIREMIEVPLRHPELFSRLGINPPRGVLLHGPPGTGK 228

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL+ARAVA E   NF+++ GPE+ SK+ GESE+ +R +F +A   APSIIF DEID +A 
Sbjct: 229  TLIARAVAGETDANFISISGPEIVSKFYGESEQRLRQIFDEASKAAPSIIFIDEIDSIAP 288

Query: 883  IRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
             R +E  G  +  RV++Q+L  +DGL  R  V VIAATNRP+ +DPA+ R GRFDR + +
Sbjct: 289  KR-EEVSG-DLERRVVAQILSLMDGLSSRGEVIVIAATNRPNALDPAIRRGGRFDREIEI 346

Query: 943  GPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----- 997
            G PN   R E+  +H R +P    +++ E+A  + G  GAD+  +C+EAA+  +E     
Sbjct: 347  GIPNRNGRLEVLYVHTRGMPLDESLDLMEIADSTHGFVGADLYALCKEAAMRTLERALPD 406

Query: 998  ---------ENLDASRITMQHLKTAIRHVQPS 1020
                     + LD   +T +   +A++ ++PS
Sbjct: 407  LDVKEDIPLDVLDNLNVTREDFLSALKKIEPS 438



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 131/215 (60%), Gaps = 17/215 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            +S+G+RP +G+LL+G PGTGKT L R  A +S VN  +V GPE++S+  GESE+A+ E+
Sbjct: 479 FASVGVRPPRGILLYGLPGTGKTLLVRALATESNVNFISVKGPELLSKWVGESERAVREI 538

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q+APA+VF DE+D+I PAR  G +  +++R+V+  L  MDG+     V+++AATN
Sbjct: 539 FRKARQAAPALVFFDEIDSIVPARGSGSDSHVTERVVSQFLTEMDGLMELKDVVIVAATN 598

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD ++ +L RPGR DR + I M              P    R +IL   LS M     +
Sbjct: 599 RPDLLDSSLLRPGRFDRLVYIPM--------------PDKEARQKILEIYLSKM--PAYE 642

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 649
              ++L+  T  F GADL  LC EA ++ LR + +
Sbjct: 643 VSAQWLADITENFSGADLEMLCREAGMLALREHIR 677


>gi|448677880|ref|ZP_21689070.1| cell division control protein 48 [Haloarcula argentinensis DSM 12282]
 gi|445773555|gb|EMA24588.1| cell division control protein 48 [Haloarcula argentinensis DSM 12282]
          Length = 757

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 138/308 (44%), Positives = 197/308 (63%), Gaps = 16/308 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF +A   + PSA+REV +EVP V W+ VGG    K +L E ++WP ++++ F+
Sbjct: 434  LEISDTDFREAMKGIEPSALREVFVEVPDVTWDSVGGLEGTKERLRETIQWPLEYEDVFE 493

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +      G+LM+GPPG  KTL+A+AVA+EA  NF++VKGPEL +K+VGESEK VR +F+
Sbjct: 494  SMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKFVGESEKGVREVFS 553

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR NAP+++FFDEID +A  RG  +    V +RV+SQLL ELDG+    NV V+A TNR
Sbjct: 554  KARENAPTVVFFDEIDSIAGERGGGTTDSGVGERVVSQLLTELDGIEDMENVVVVATTNR 613

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR ++V  P+E  R  IF++H R  P +  V++ +LA  ++G  GA
Sbjct: 614  PDLIDDALLRPGRLDRHVHVPVPDEEARRAIFQVHTRDKPLADGVDLDQLASRTDGYVGA 673

Query: 983  DISLICREAAISAIEENLDA------------SRITMQHLKTAIRHVQPSEIHS----YK 1026
            DI  + REA+++A  E +++             R+TM H + A+  V PS        Y 
Sbjct: 674  DIEAVAREASMAATREFINSVDPEEIGDSVSNVRVTMDHFEHALEEVGPSVTEETRERYD 733

Query: 1027 ELSAKFQR 1034
            E+  +F R
Sbjct: 734  EIEQRFDR 741



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/268 (41%), Positives = 166/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            + P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+
Sbjct: 186  DTPDVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAK 245

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E    F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  RG E
Sbjct: 246  AVANEIDAYFTTISGPEIMSKYYGESEEQLREIFDEASENSPAIVFIDEIDSIAPKRG-E 304

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            + G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P++
Sbjct: 305  TQG-DVERRVVAQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEIGVPDK 363

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P S ++NI   A  + G  GAD++ + +E+A++A+           
Sbjct: 364  EGRKEILQVHTRGMPLSEEINIENYAENTHGFVGADLASLTKESAMNALRRIRPELDLES 423

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+   I+    + A++ ++PS
Sbjct: 424  DEIDAEVLERLEISDTDFREAMKGIEPS 451



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/235 (46%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 195 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAY 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+FD AS+++PA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FTTISGPEIMSKYYGESEEQLREIFDEASENSPAIVFIDEIDSIAPKRGETQGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S  +  +E  +  THGFVGADLA+L  E+A+  LRR
Sbjct: 361 PDKEGRKEILQVHTRGMPLS-EEINIENYAENTHGFVGADLASLTKESAMNALRR 414



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 152/284 (53%), Gaps = 22/284 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I      +    S+ L   KGVL++GPPGTGKT LA+  A+++  N
Sbjct: 468 VGGLEGTKERLRETIQWPLEYEDVFESMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSN 527

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             +V GPE++++  GESE+ + EVF  A ++AP VVF DE+D+IA  R  G  +  + +R
Sbjct: 528 FISVKGPELLNKFVGESEKGVREVFSKARENAPTVVFFDEIDSIAGERGGGTTDSGVGER 587

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+V+A TNRPD I+ AL RPGRLDR + +              
Sbjct: 588 VVSQLLTELDGIEDMENVVVVATTNRPDLIDDALLRPGRLDRHVHV-------------- 633

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            VP    R  I    +   +  L D  +++ L+  T G+VGAD+ A+  EA++   R + 
Sbjct: 634 PVPDEEARRAIFQ--VHTRDKPLADGVDLDQLASRTDGYVGADIEAVAREASMAATREFI 691

Query: 649 KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLD 692
                 ++  S   +     H +  L++   S  +TE +R+  D
Sbjct: 692 NSVDPEEIGDSVSNVRVTMDHFEHALEEVGPS--VTEETRERYD 733


>gi|113475969|ref|YP_722030.1| vesicle-fusing ATPase [Trichodesmium erythraeum IMS101]
 gi|110167017|gb|ABG51557.1| Vesicle-fusing ATPase [Trichodesmium erythraeum IMS101]
          Length = 639

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 218/596 (36%), Positives = 303/596 (50%), Gaps = 114/596 (19%)

Query: 410 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           +  +GG+S+    L+++I +       L+ LGL P++GVLL GPPGTGKT  A+  A + 
Sbjct: 104 LRDIGGMSEVIQELREVIELPLKRPDLLTKLGLEPSRGVLLVGPPGTGKTLTAKAIAEEL 163

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
           G+N   +NGPEV+S+ YGE+E  L ++F  A +SAP ++FIDE+D+IAP R     E+ +
Sbjct: 164 GLNYIAINGPEVMSKYYGEAEGKLRDIFAKAKKSAPCLIFIDEIDSIAPDRSKVEGEVEK 223

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+VA LL LMDG    +GVL++AATNRPD I+PALRRPGR D+E+               
Sbjct: 224 RLVAQLLGLMDGFEVLEGVLLLAATNRPDHIDPALRRPGRFDQEVYFH------------ 271

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
             VP    R EIL  L   M    LD+ V+   +A    G VGADL A+C +AA   LRR
Sbjct: 272 --VPDRDGRSEILQILTKAMP---LDNSVDLEEIADLAVGLVGADLKAVCQKAAYFALRR 326

Query: 647 YS------KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSD 700
                    IQT  D+               ++LQ SD  R I E               
Sbjct: 327 EVPSLENLNIQTPEDM---------------SLLQ-SDLLRAIKEIK------------- 357

Query: 701 LPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPS 760
            P+ L S ++     V  ++     G+      +  S +G  L  EL  +EK + K    
Sbjct: 358 -PSILRSVAV----EVPNVSWQHIGGLDVVKQKLQESVEGALLYPEL--YEKTKAK---- 406

Query: 761 AMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGC 820
           A + ++L      W + G     KT L +AV    + Q  F          I + GP   
Sbjct: 407 APKGILL------WGEPGTG---KTLLAKAV--ASQAQANF----------IAVNGPELL 445

Query: 821 SKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGL 880
           SK + A   A E      AV+  ELFSK               AR  +P +IF DEID L
Sbjct: 446 SKWVGA---AEE------AVR--ELFSK---------------ARQVSPCVIFIDEIDTL 479

Query: 881 AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLL 940
           A  RGK      VSDR++ QLL ELDGL     + ++ ATNRPD +DPALLR GR D  +
Sbjct: 480 APARGKTMGDSGVSDRLVGQLLTELDGLRDCTQLLLVGATNRPDALDPALLRAGRLDLQI 539

Query: 941 YVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            V  P++  R EI ++H +  P   +VN+ + A  +EG  GAD++L+  +AA++AI
Sbjct: 540 KVDLPDQASRLEILKVHNQDRPL-EEVNLEDWASRTEGWNGADLALLTNQAALAAI 594



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/260 (41%), Positives = 157/260 (60%), Gaps = 13/260 (5%)

Query: 776  DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGL 835
            D+GG  EV  +L E +E P K  +   ++G  P  G+L+ GPPG  KTL A+A+A E GL
Sbjct: 106  DIGGMSEVIQELREVIELPLKRPDLLTKLGLEPSRGVLLVGPPGTGKTLTAKAIAEELGL 165

Query: 836  NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 895
            N++A+ GPE+ SK+ GE+E  +R +FAKA+ +AP +IF DEID +A  R K      V  
Sbjct: 166  NYIAINGPEVMSKYYGEAEGKLRDIFAKAKKSAPCLIFIDEIDSIAPDRSKVEG--EVEK 223

Query: 896  RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFR 955
            R+++QLL  +DG      V ++AATNRPD IDPAL RPGRFD+ +Y   P+   R EI +
Sbjct: 224  RLVAQLLGLMDGFEVLEGVLLLAATNRPDHIDPALRRPGRFDQEVYFHVPDRDGRSEILQ 283

Query: 956  IHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------ENLDASR----- 1004
            I  + +P  + V++ E+A L+ G  GAD+  +C++AA  A+       ENL+        
Sbjct: 284  ILTKAMPLDNSVDLEEIADLAVGLVGADLKAVCQKAAYFALRREVPSLENLNIQTPEDMS 343

Query: 1005 ITMQHLKTAIRHVQPSEIHS 1024
            +    L  AI+ ++PS + S
Sbjct: 344  LLQSDLLRAIKEIKPSILRS 363



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/206 (42%), Positives = 124/206 (60%), Gaps = 18/206 (8%)

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           KG+LL G PGTGKT LA+  A  +  N   VNGPE++S+  G +E+A+ E+F  A Q +P
Sbjct: 409 KGILLWGEPGTGKTLLAKAVASQAQANFIAVNGPELLSKWVGAAEEAVRELFSKARQVSP 468

Query: 505 AVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPA 562
            V+FIDE+D +APAR    G   +S R+V  LL  +DG+     +L++ ATNRPD+++PA
Sbjct: 469 CVIFIDEIDTLAPARGKTMGDSGVSDRLVGQLLTELDGLRDCTQLLLVGATNRPDALDPA 528

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM 622
           L R GRLD +I++D+              P  A RLEIL   +   +  L +  +E  + 
Sbjct: 529 LLRAGRLDLQIKVDL--------------PDQASRLEILK--VHNQDRPLEEVNLEDWAS 572

Query: 623 ATHGFVGADLAALCNEAALVCLRRYS 648
            T G+ GADLA L N+AAL  +R YS
Sbjct: 573 RTEGWNGADLALLTNQAALAAIRSYS 598


>gi|147676766|ref|YP_001210981.1| ATPase [Pelotomaculum thermopropionicum SI]
 gi|146272863|dbj|BAF58612.1| ATPase [Pelotomaculum thermopropionicum SI]
          Length = 638

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 139/287 (48%), Positives = 195/287 (67%), Gaps = 11/287 (3%)

Query: 741  CALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEA 800
              +K+E+ DF +A  +V PSA RE +++VP V+WEDVGG +E+K +L +AVEWP K++E 
Sbjct: 340  AGIKVEMKDFLEAMKEVEPSATREFLVDVPAVRWEDVGGLKEIKQELRQAVEWPLKYREL 399

Query: 801  FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 860
            F+  G  PP G+++ GPPG  KTL+ARA+ASE   NF+AVKGP L SKW+GESEKAVR L
Sbjct: 400  FETAGISPPRGVILHGPPGTGKTLLARALASEINANFIAVKGPSLLSKWMGESEKAVREL 459

Query: 861  FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
            F KA+  AP ++FFDEID L   R  E+     +DRV+SQLL E+DG+ +   V ++AAT
Sbjct: 460  FRKAKQVAPCLVFFDEIDSLVPAR--EAGHGGAADRVLSQLLTEIDGIEELRGVVLLAAT 517

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NR D IDPALLRPGRFD  L +  P++    EIF++H RK+P   ++++  LA   +G +
Sbjct: 518  NRIDLIDPALLRPGRFDLHLRLDLPDKEAIVEIFKVHTRKMPLHQNIDLDALADACKGFS 577

Query: 981  GADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQ 1018
            GADI  +C  AAI A+ E ++A+         R+TMQH   ++  ++
Sbjct: 578  GADIRQVCHRAAILAMREYIEANKKAAAAPRYRVTMQHFLKSLEFIK 624



 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/267 (41%), Positives = 155/267 (58%), Gaps = 17/267 (6%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            + D+GG  +   ++ E +E P  H E F+ +G  PP G+L++GPPG  KTL+ARAVA E 
Sbjct: 100  YRDIGGLDKELQKIREMIELPLTHPELFEHLGIEPPRGVLLYGPPGTGKTLIARAVAGET 159

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
               F+ V GPE+  K+ GESE  +R +F KA  N PSIIF DEID +A  R +E  G  V
Sbjct: 160  KACFIHVNGPEIIHKYYGESEARLREIFQKAAGNRPSIIFLDEIDAVAPKR-EEVTG-EV 217

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV++QLL  +DGL  R  V VI ATN P+ IDPAL RPGRFDR + V  P+   R EI
Sbjct: 218  EKRVVAQLLALMDGLKSRGQVIVIGATNLPNAIDPALRRPGRFDREIRVSIPDRKGRREI 277

Query: 954  FRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------------E 998
              IH R +P + DV++  LA ++ G  GAD+  +C+EAA+  +                E
Sbjct: 278  LSIHTRGMPVAGDVDLDRLAEITHGFVGADLRALCQEAAMRCVRRVYPLIGAQTGKAAGE 337

Query: 999  NLDASRITMQHLKTAIRHVQPSEIHSY 1025
             L   ++ M+    A++ V+PS    +
Sbjct: 338  FLAGIKVEMKDFLEAMKEVEPSATREF 364



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 107/250 (42%), Positives = 156/250 (62%), Gaps = 18/250 (7%)

Query: 400 QNVQATVEQDIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTG 456
           QN + +  ++ S   +GGL KE   ++++I +  +       LG+ P +GVLL+GPPGTG
Sbjct: 88  QNSKGSAAKEFSYRDIGGLDKELQKIREMIELPLTHPELFEHLGIEPPRGVLLYGPPGTG 147

Query: 457 KTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIA 516
           KT +AR  A ++      VNGPE++ + YGESE  L E+F  A+ + P+++F+DE+DA+A
Sbjct: 148 KTLIARAVAGETKACFIHVNGPEIIHKYYGESEARLREIFQKAAGNRPSIIFLDEIDAVA 207

Query: 517 PARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEID 576
           P R++   E+ +R+VA LL LMDG+     V+VI ATN P++I+PALRRPGR DREI + 
Sbjct: 208 PKREEVTGEVEKRVVAQLLALMDGLKSRGQVIVIGATNLPNAIDPALRRPGRFDREIRV- 266

Query: 577 MSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALC 636
                        ++P    R EIL     GM  +  D +++ L+  THGFVGADL ALC
Sbjct: 267 -------------SIPDRKGRREILSIHTRGMPVA-GDVDLDRLAEITHGFVGADLRALC 312

Query: 637 NEAALVCLRR 646
            EAA+ C+RR
Sbjct: 313 QEAAMRCVRR 322



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/257 (36%), Positives = 143/257 (55%), Gaps = 20/257 (7%)

Query: 393 PNAQIEF-QNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A  EF  +V A   +D+  L  + +E  + + +      +    + G+ P +GV+LHG
Sbjct: 358 PSATREFLVDVPAVRWEDVGGLKEIKQE--LRQAVEWPLKYRELFETAGISPPRGVILHG 415

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LAR  A +   N   V GP ++S+  GESE+A+ E+F  A Q AP +VF DE
Sbjct: 416 PPGTGKTLLARALASEINANFIAVKGPSLLSKWMGESEKAVRELFRKAKQVAPCLVFFDE 475

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +D++ PAR+ G    + R+++ LL  +DG+    GV+++AATNR D I+PAL RPGR D 
Sbjct: 476 IDSLVPAREAGHGGAADRVLSQLLTEIDGIEELRGVVLLAATNRIDLIDPALLRPGRFDL 535

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGME-HSLLDSEVEYLSMATHGFVGA 630
            + +D+              P     +EI       M  H  +D  ++ L+ A  GF GA
Sbjct: 536 HLRLDL--------------PDKEAIVEIFKVHTRKMPLHQNID--LDALADACKGFSGA 579

Query: 631 DLAALCNEAALVCLRRY 647
           D+  +C+ AA++ +R Y
Sbjct: 580 DIRQVCHRAAILAMREY 596


>gi|448606059|ref|ZP_21658638.1| cell division control protein 48 [Haloferax sulfurifontis ATCC
            BAA-897]
 gi|445739476|gb|ELZ90983.1| cell division control protein 48 [Haloferax sulfurifontis ATCC
            BAA-897]
          Length = 754

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 137/291 (47%), Positives = 194/291 (66%), Gaps = 12/291 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             LK+   DF++A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F
Sbjct: 430  GLKVTEDDFKQALKSIEPSALREVFVEVPDVTWEDVGGLEPTKERLRETIQWPLEYPEVF 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 490  QQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +A  RG++S    V++RV+SQLL ELDGL    +V VIA TN
Sbjct: 550  KKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIATTN 609

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  I  +H R  P + DVN+ ++A  ++G  G
Sbjct: 610  RPDLIDSALLRPGRLDRHVHVPVPDEEARRAILDVHTRNKPLADDVNLDKIASKTDGYVG 669

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            AD+  + REA+++A            I E++   R+TM+H + A+  +  S
Sbjct: 670  ADLEALAREASMNASREFIRSVEKEDIGESVGNVRVTMEHFEDALDEIGAS 720



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 164/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  R +   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEIGVPDRDG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + DV++ E A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEIMQVHTRNMPLTDDVDLDEYADSTHGFVGADLESLAKESAMHALRRIRPQLDLDAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K A++ ++PS
Sbjct: 423  IDAEVLEGLKVTEDDFKQALKSIEPS 448



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A++++PA+VFIDE+D+IAP R + G ++ +R+V
Sbjct: 252 FHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEAGGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EI+      M  +  D +++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 358 PDRDGRKEIMQVHTRNMPLT-DDVDLDEYADSTHGFVGADLESLAKESAMHALRR 411



 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 134/246 (54%), Gaps = 23/246 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 488 VFQQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 547

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP VVF DE+D+IA    R      +++R+V+ LL  +DG+   + V+VIA 
Sbjct: 548 VFKKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIAT 607

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  IL   +      L
Sbjct: 608 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDEEARRAILD--VHTRNKPL 651

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLFEFE 667
            D   ++ ++  T G+VGADL AL  EA++   R + +     D+  S G    T+  FE
Sbjct: 652 ADDVNLDKIASKTDGYVGADLEALAREASMNASREFIRSVEKEDIGESVGNVRVTMEHFE 711

Query: 668 GHSDTM 673
              D +
Sbjct: 712 DALDEI 717


>gi|448633745|ref|ZP_21674244.1| cell division control protein 48 [Haloarcula vallismortis ATCC 29715]
 gi|445750436|gb|EMA01874.1| cell division control protein 48 [Haloarcula vallismortis ATCC 29715]
          Length = 757

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 135/290 (46%), Positives = 193/290 (66%), Gaps = 12/290 (4%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++   DF +A   + PSA+REV +EVP V W+ VGG  + K +L E ++WP ++++ F+
Sbjct: 434  LEISDTDFREAMKGIEPSALREVFVEVPDVTWDSVGGLEDTKERLRETIQWPLEYEDVFE 493

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +      G+LM+GPPG  KTL+A+AVA+EA  NF++VKGPEL +K+VGESEK VR +F+
Sbjct: 494  SMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKFVGESEKGVREVFS 553

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR NAP+++FFDEID +A  RG  +    V +RV+SQLL ELDG+ +  NV V+A TNR
Sbjct: 554  KARENAPTVVFFDEIDSIAGERGGGTTDSGVGERVVSQLLTELDGIEEMENVVVVATTNR 613

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD ID ALLRPGR DR ++V  P+E  R  IF++H R  P +  V++ ELA  ++G  GA
Sbjct: 614  PDLIDDALLRPGRLDRHVHVPVPDEDARRAIFQVHTRNKPLADGVDLDELARRTDGYVGA 673

Query: 983  DISLICREAAISAIEENLDA------------SRITMQHLKTAIRHVQPS 1020
            DI  + REA+++A  E +++             R+TM H + A+  V PS
Sbjct: 674  DIEAVAREASMAATREFINSVDPEEIGDSVSNVRVTMDHFEHALEEVGPS 723



 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/268 (41%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            + P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+
Sbjct: 186  DTPDVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAK 245

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E    F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  RG E
Sbjct: 246  AVANEIDAYFTTISGPEIMSKYYGESEEQLREIFDEASENSPAIVFIDEIDSIAPKRG-E 304

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            + G  V  RV++QLL  +DGL +R  V VI ATNR D IDPAL R GRFDR + +G P++
Sbjct: 305  TQG-DVERRVVAQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEIGVPDK 363

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------- 997
              R+EI ++H R +P S  ++I   A  + G  GAD++ + +E+A++A+           
Sbjct: 364  EGRKEILQVHTRGMPLSEKIDIENYAENTHGFVGADLASLTKESAMNALRRIRPELDLES 423

Query: 998  -----ENLDASRITMQHLKTAIRHVQPS 1020
                 E L+   I+    + A++ ++PS
Sbjct: 424  DEIDAEVLERLEISDTDFREAMKGIEPS 451



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/235 (46%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 195 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAY 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+FD AS+++PA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FTTISGPEIMSKYYGESEEQLREIFDEASENSPAIVFIDEIDSIAPKRGETQGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLEERGQVIVIGATNRVDAIDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S    ++E  +  THGFVGADLA+L  E+A+  LRR
Sbjct: 361 PDKEGRKEILQVHTRGMPLS-EKIDIENYAENTHGFVGADLASLTKESAMNALRR 414



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 134/239 (56%), Gaps = 20/239 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I      +    S+ L   KGVL++GPPGTGKT LA+  A+++  N
Sbjct: 468 VGGLEDTKERLRETIQWPLEYEDVFESMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSN 527

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             +V GPE++++  GESE+ + EVF  A ++AP VVF DE+D+IA  R  G  +  + +R
Sbjct: 528 FISVKGPELLNKFVGESEKGVREVFSKARENAPTVVFFDEIDSIAGERGGGTTDSGVGER 587

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+V+A TNRPD I+ AL RPGRLDR + +              
Sbjct: 588 VVSQLLTELDGIEEMENVVVVATTNRPDLIDDALLRPGRLDRHVHV-------------- 633

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            VP    R  I    +      L D  +++ L+  T G+VGAD+ A+  EA++   R +
Sbjct: 634 PVPDEDARRAIFQ--VHTRNKPLADGVDLDELARRTDGYVGADIEAVAREASMAATREF 690


>gi|292656819|ref|YP_003536716.1| cell division control protein 48 [Haloferax volcanii DS2]
 gi|448290819|ref|ZP_21481964.1| cell division control protein 48 [Haloferax volcanii DS2]
 gi|291371169|gb|ADE03396.1| cell division control protein 48 [Haloferax volcanii DS2]
 gi|445577872|gb|ELY32292.1| cell division control protein 48 [Haloferax volcanii DS2]
          Length = 754

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 137/291 (47%), Positives = 194/291 (66%), Gaps = 12/291 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             LK+   DF++A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F
Sbjct: 430  GLKVTEDDFKQALKSIEPSALREVFVEVPDVTWEDVGGLEPTKERLRETIQWPLEYPEVF 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 490  QQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +A  RG++S    V++RV+SQLL ELDGL    +V VIA TN
Sbjct: 550  KKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIATTN 609

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  I  +H R+ P + DVN+ ++A  ++G  G
Sbjct: 610  RPDLIDSALLRPGRLDRHVHVPVPDEDARRAILDVHTREKPLADDVNLDKIASKTDGYVG 669

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            AD+  + REA+++A            I E++   R+TM H + A+  +  S
Sbjct: 670  ADLEALAREASMNASREFIRSVQKEEIGESVGNVRVTMDHFEDALDEIGAS 720



 Score =  215 bits (548), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 163/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  R +   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEIGVPDRDG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + DV++   A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEIMQVHTRNMPLTDDVDLDAYADSTHGFVGADLESLAKESAMHALRRIRPQLDLDAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K A++ ++PS
Sbjct: 423  IDAEVLEGLKVTEDDFKQALKSIEPS 448



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A++++PA+VFIDE+D+IAP R + G ++ +R+V
Sbjct: 252 FHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEAGGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EI+      M  +  D +++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 358 PDRDGRKEIMQVHTRNMPLT-DDVDLDAYADSTHGFVGADLESLAKESAMHALRR 411



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 135/246 (54%), Gaps = 23/246 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 488 VFQQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 547

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP VVF DE+D+IA    R      +++R+V+ LL  +DG+   + V+VIA 
Sbjct: 548 VFKKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIAT 607

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  IL   +   E  L
Sbjct: 608 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDEDARRAILD--VHTREKPL 651

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLFEFE 667
            D   ++ ++  T G+VGADL AL  EA++   R + +     ++  S G    T+  FE
Sbjct: 652 ADDVNLDKIASKTDGYVGADLEALAREASMNASREFIRSVQKEEIGESVGNVRVTMDHFE 711

Query: 668 GHSDTM 673
              D +
Sbjct: 712 DALDEI 717


>gi|448322493|ref|ZP_21511963.1| ATPase AAA [Natronococcus amylolyticus DSM 10524]
 gi|445601251|gb|ELY55240.1| ATPase AAA [Natronococcus amylolyticus DSM 10524]
          Length = 753

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 138/308 (44%), Positives = 200/308 (64%), Gaps = 16/308 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   D ++A   ++PSA+REV +EVP V W+ VGG  + K +L E ++WP  + E F
Sbjct: 431  SLEVTETDVKEAMKGIQPSALREVFVEVPDVTWDHVGGLGDTKERLRETIQWPLDYPEVF 490

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+E+  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 491  EQMDMEAARGVLMYGPPGTGKTLLAKAVANESQSNFISIKGPELLNKYVGESEKGVREVF 550

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+NAP++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TN
Sbjct: 551  EKARSNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEELEDVVVIATTN 610

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R+ IF +H R  P +  +++  LA  +EG  G
Sbjct: 611  RPDLIDSALLRPGRLDRHVHVPVPDEEGRKRIFEVHTRDKPLADAIDLEWLAAETEGYVG 670

Query: 982  ADISLICREAAISAIEE------------NLDASRITMQHLKTAIRHVQPSEI----HSY 1025
            ADI  + REA+++A  E             ++  RI+ +H + A+  VQPS        Y
Sbjct: 671  ADIEAVTREASMAASREFINSVDPDDMPDTIENVRISKEHFEQALEEVQPSVTPETRERY 730

Query: 1026 KELSAKFQ 1033
            +E+  +FQ
Sbjct: 731  EEIEQQFQ 738



 Score =  232 bits (592), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 170/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP + +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+A
Sbjct: 185  VPNITYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKA 244

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+IIF DE+D +AA R  E 
Sbjct: 245  VANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKR--EE 302

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL  +DGL +RV VTVIAATNR D IDPAL R GRFDR + +G P++ 
Sbjct: 303  AGGDVERRVVAQLLSLMDGLEERVRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKG 362

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------- 997
             R+EI ++H R +P S D+++   A  + G  GAD+  + RE A++A+            
Sbjct: 363  GRKEILQVHTRGMPLSEDIDLDHYAENTHGFVGADLESLAREGAMNALRRIRPDLDLESD 422

Query: 998  ----ENLDASRITMQHLKTAIRHVQPS 1020
                E L++  +T   +K A++ +QPS
Sbjct: 423  EIDAEILESLEVTETDVKEAMKGIQPS 449



 Score =  201 bits (512), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/235 (46%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 193 IGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAH 252

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVF+ A ++APA++FIDELD+IA  R++ G ++ +R+V
Sbjct: 253 FETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAKREEAGGDVERRVV 312

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 313 AQLLSLMDGLEERVRVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 358

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S  D ++++ +  THGFVGADL +L  E A+  LRR
Sbjct: 359 PDKGGRKEILQVHTRGMPLS-EDIDLDHYAENTHGFVGADLESLAREGAMNALRR 412



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 135/239 (56%), Gaps = 20/239 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I            + +   +GVL++GPPGTGKT LA+  A++S  N
Sbjct: 466 VGGLGDTKERLRETIQWPLDYPEVFEQMDMEAARGVLMYGPPGTGKTLLAKAVANESQSN 525

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             ++ GPE++++  GESE+ + EVF+ A  +AP V+F DE+D+IA  R  + G   + +R
Sbjct: 526 FISIKGPELLNKYVGESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVGER 585

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +              
Sbjct: 586 VVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV-------------- 631

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            VP    R  I    +   +  L D+ ++E+L+  T G+VGAD+ A+  EA++   R +
Sbjct: 632 PVPDEEGRKRIFE--VHTRDKPLADAIDLEWLAAETEGYVGADIEAVTREASMAASREF 688


>gi|448727345|ref|ZP_21709711.1| ATPase AAA [Halococcus morrhuae DSM 1307]
 gi|445791559|gb|EMA42199.1| ATPase AAA [Halococcus morrhuae DSM 1307]
          Length = 756

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 197/307 (64%), Gaps = 16/307 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   D + A   + PSA+REV +EVP V WE VGG  + K +L E V+WP  + E F
Sbjct: 433  SLQVTRDDLKSALKGIEPSALREVFVEVPDVTWESVGGLDDTKERLRETVQWPLDYPEVF 492

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + +      G++M+GPPG  KTL+A+A+A+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 493  EAMDMNAAKGVMMYGPPGTGKTLLAKAIANEAQSNFISIKGPELLNKFVGESEKGVREVF 552

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            +KAR NAP++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA +N
Sbjct: 553  SKARENAPTVIFFDEIDAIAGERGRNMGDSGVGERVVSQLLTELDGLEELEDVVVIATSN 612

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  RE IF +H R  P + DV++ +LA  +EG  G
Sbjct: 613  RPDLIDSALLRPGRLDRHVHVPVPDEDAREAIFEVHTRDKPLADDVDLADLARRTEGYVG 672

Query: 982  ADISLICREAAISAIE--------ENLDAS----RITMQHLKTAIRHVQPSEI----HSY 1025
            ADI  + REAA++A          E+LD S    RI  +H   A+  V PS        Y
Sbjct: 673  ADIEAVTREAAMAATRELIQTVDPEDLDGSVGNVRIEDEHFDQALDDVTPSVTAETKERY 732

Query: 1026 KELSAKF 1032
            +E+  +F
Sbjct: 733  EEIEDRF 739



 Score =  219 bits (557), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 167/266 (62%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 188  PSVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLIAKAV 247

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F  A  N P+I+F DEID +A  R + S 
Sbjct: 248  ANEIDAHFETISGPEIMSKYYGESEEQLREMFDNAEENEPAIVFIDEIDSIAPKRDETSG 307

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++  
Sbjct: 308  --DVERRVVAQLLSLMDGLEERGQVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKEG 365

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN 999
            R+EI ++H R +P +  +++   A  + G  G+DI  + +E+A++A+          EE 
Sbjct: 366  RKEILQVHTRGMPLADGIDLDTYAESTHGFVGSDIESLAKESAMNALRRIRPELDLDEEE 425

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T   LK+A++ ++PS
Sbjct: 426  IDAEVLESLQVTRDDLKSALKGIEPS 451



 Score =  196 bits (499), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/236 (44%), Positives = 151/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 195 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAH 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+FD+A ++ PA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FETISGPEIMSKYYGESEEQLREMFDNAEENEPAIVFIDEIDSIAPKRDETSGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLEERGQVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L D  +++  + +THGFVG+D+ +L  E+A+  LRR
Sbjct: 361 PDKEGRKEILQVHTRGM--PLADGIDLDTYAESTHGFVGSDIESLAKESAMNALRR 414



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 143/274 (52%), Gaps = 24/274 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
              ++ +   KGV+++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 491 VFEAMDMNAAKGVMMYGPPGTGKTLLAKAIANEAQSNFISIKGPELLNKFVGESEKGVRE 550

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP V+F DE+DAIA    R  G   + +R+V+ LL  +DG+   + V+VIA 
Sbjct: 551 VFSKARENAPTVIFFDEIDAIAGERGRNMGDSGVGERVVSQLLTELDGLEELEDVVVIAT 610

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           +NRPD I+ AL RPGRLDR + +               VP    R  I    +   +  L
Sbjct: 611 SNRPDLIDSALLRPGRLDRHVHV--------------PVPDEDAREAIFE--VHTRDKPL 654

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSD 671
            D  ++  L+  T G+VGAD+ A+  EAA+   R   +     D+  S G +   + H D
Sbjct: 655 ADDVDLADLARRTEGYVGADIEAVTREAAMAATRELIQTVDPEDLDGSVGNVRIEDEHFD 714

Query: 672 TMLQDSDCS-----RNITESSRDCLDSASPCTSD 700
             L D   S     +   E   D  D+  P T +
Sbjct: 715 QALDDVTPSVTAETKERYEEIEDRFDTGEPATEE 748


>gi|289580455|ref|YP_003478921.1| ATPase AAA [Natrialba magadii ATCC 43099]
 gi|289530008|gb|ADD04359.1| AAA family ATPase, CDC48 subfamily [Natrialba magadii ATCC 43099]
          Length = 763

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 191/307 (62%), Gaps = 16/307 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            A+++E  DF+ A   V PSA+REV +EVP   W++VGG    K +L E ++WP  +   F
Sbjct: 456  AIRIEDRDFQHAMSSVDPSALREVFVEVPDTSWDEVGGLETTKERLRETIQWPLAYSPVF 515

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
              +      G+L++GPPG  KTL+A+AVASEA  NF++VKGPEL +K+VGESEK VR +F
Sbjct: 516  DELHLSAANGVLLYGPPGTGKTLLAKAVASEAQSNFISVKGPELLNKYVGESEKGVREVF 575

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+NAP+++FFDEID +AA RG   D   V +RV+SQLL ELDGL +  +V VIA +N
Sbjct: 576  EKARSNAPTVVFFDEIDAIAAERGSGGDASGVQERVVSQLLTELDGLEELEDVVVIATSN 635

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGRFDR ++V  P+E  R EIF +H        DV +  LA  ++G  G
Sbjct: 636  RPDLIDDALLRPGRFDRQIHVPIPDEQARREIFAVHTAHRSIGDDVELARLAGRTQGYVG 695

Query: 982  ADISLICREAAISAIEENLDAS------------RITMQHLKTAIR----HVQPSEIHSY 1025
            AD+  ICREAA+ A  E +D               +T +H   AI+     V  +    Y
Sbjct: 696  ADVQAICREAAMEAAREYVDGVTPSDVDDGVGTITVTAEHFDHAIKSTSSSVNQAIKRRY 755

Query: 1026 KELSAKF 1032
            +EL  KF
Sbjct: 756  EELERKF 762



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/272 (41%), Positives = 165/272 (60%), Gaps = 17/272 (6%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            ++  E P + +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KT
Sbjct: 205  QIQTEPPDITYEDIGGVDDELEQVREMIELPMRHPELFQQLGIDPPKGVLLHGPPGTGKT 264

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+AVA+E    F  + GPE+ S++ GESE+ +RS+F  A  NAP+++F DEID +A  
Sbjct: 265  LIAKAVANEIDAFFTDISGPEIMSRYYGESEEQLRSVFEDATENAPAVVFIDEIDSIAPK 324

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            R + S    V  R+++QLL  LDG+ +R  V VI ATNR + IDPAL R GRFDR + VG
Sbjct: 325  RDETSG--DVERRIVAQLLSLLDGIEERGEVVVIGATNRLNAIDPALRRGGRFDREIEVG 382

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE---NL 1000
             P+   REEIF +H R +P S ++++ E A  + G  GADI  + +EAA+ A+     NL
Sbjct: 383  IPDRDGREEIFEVHTRGMPLSEEIDLSEYAVDTHGFVGADIEQLAKEAAMRALRRVRPNL 442

Query: 1001 D------------ASRITMQHLKTAIRHVQPS 1020
            D            A RI  +  + A+  V PS
Sbjct: 443  DLEADTIDAAALEAIRIEDRDFQHAMSSVDPS 474



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 144/235 (61%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 218 IGGVDDELEQVREMIELPMRHPELFQQLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAF 277

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              ++GPE++S+ YGESE+ L  VF+ A+++APAVVFIDE+D+IAP R +   ++ +R+V
Sbjct: 278 FTDISGPEIMSRYYGESEEQLRSVFEDATENAPAVVFIDEIDSIAPKRDETSGDVERRIV 337

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+L+DG+     V+VI ATNR ++I+PALRR GR DREIE+               +
Sbjct: 338 AQLLSLLDGIEERGEVVVIGATNRLNAIDPALRRGGRFDREIEV--------------GI 383

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EI      GM  S      EY ++ THGFVGAD+  L  EAA+  LRR
Sbjct: 384 PDRDGREEIFEVHTRGMPLSEEIDLSEY-AVDTHGFVGADIEQLAKEAAMRALRR 437



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 149/276 (53%), Gaps = 22/276 (7%)

Query: 412 KLGGLSKEYAILKDIIISSSVKS-TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           ++GGL      L++ I      S     L L    GVLL+GPPGTGKT LA+  A ++  
Sbjct: 490 EVGGLETTKERLRETIQWPLAYSPVFDELHLSAANGVLLYGPPGTGKTLLAKAVASEAQS 549

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQ 528
           N  +V GPE++++  GESE+ + EVF+ A  +AP VVF DE+DAIA  R  GG+   + +
Sbjct: 550 NFISVKGPELLNKYVGESEKGVREVFEKARSNAPTVVFFDEIDAIAAERGSGGDASGVQE 609

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V+ LL  +DG+   + V+VIA +NRPD I+ AL RPGR DR+I +             
Sbjct: 610 RVVSQLLTELDGLEELEDVVVIATSNRPDLIDDALLRPGRFDRQIHV------------- 656

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
             +P    R EI     +   H  +  +VE   +A  T G+VGAD+ A+C EAA+   R 
Sbjct: 657 -PIPDEQARREIFAVHTA---HRSIGDDVELARLAGRTQGYVGADVQAICREAAMEAARE 712

Query: 647 YSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRN 682
           Y    T SDV    GT+     H D  ++ +  S N
Sbjct: 713 YVDGVTPSDVDDGVGTITVTAEHFDHAIKSTSSSVN 748


>gi|159041543|ref|YP_001540795.1| AAA ATPase [Caldivirga maquilingensis IC-167]
 gi|157920378|gb|ABW01805.1| AAA family ATPase, CDC48 subfamily [Caldivirga maquilingensis
           IC-167]
          Length = 852

 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 127/231 (54%), Positives = 172/231 (74%), Gaps = 1/231 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           +K+ + DF  A   ++P+ +REVI+EVP+V W+D+GG   VK +L E VEWP K++  F 
Sbjct: 442 IKVTMQDFMDAMKYIQPTVLREVIVEVPEVHWDDIGGYASVKQELRETVEWPIKYRVYFD 501

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +G  PP GIL+FGPPG  KTL+A+AVA+E+G NF+AV+GPE+ SKW GESEKA+R +F 
Sbjct: 502 ELGVEPPKGILLFGPPGTGKTLLAKAVANESGANFIAVRGPEILSKWFGESEKAIREIFK 561

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           KAR  AP ++FFDEID +A  RG   D    +DR+++Q+L E+DG+    NV VIAATNR
Sbjct: 562 KARMAAPCVVFFDEIDAIAPARGYRIDS-GATDRIVNQILAEMDGIAPLRNVVVIAATNR 620

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELA 973
           PD +DPALLRPGRFDR++YV PP++    EIF++H R I  SS+VN++ELA
Sbjct: 621 PDILDPALLRPGRFDRIIYVPPPDKEAILEIFKVHTRHIKLSSEVNVQELA 671



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/288 (40%), Positives = 177/288 (61%), Gaps = 38/288 (13%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P+V WED+G   E K ++ E VE P KH E F+ +G  PP G+L+ GPPG  KTL+A+A
Sbjct: 174  LPRVTWEDIGDLEEAKQKIRELVELPLKHPELFRHLGIEPPKGVLLIGPPGTGKTLLAKA 233

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+EA   F+++ GPE+ SK+ GESE  +R +F +A+ NAP+IIF DEID +A  R +E 
Sbjct: 234  VANEADAYFVSINGPEIVSKYYGESEARLREIFDEAKRNAPAIIFIDEIDSIAPKR-EEV 292

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  R+++QLL  +DGL +R  V VI ATNRPD +DPAL RPGRFDR + +G P++ 
Sbjct: 293  TG-EVEKRIVAQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREINIGMPDKR 351

Query: 949  DREEIFRIHLRKIP-CSSD-----------------VNIRELACLSEGCTGADISLICRE 990
             R +I  IH R +P C+ D                 V++ ++A ++ G TGADI+ + +E
Sbjct: 352  ARLDILSIHTRGVPLCTPDDVSNCKGDNCPCKRGDEVDLEKIADMTHGYTGADIAALVKE 411

Query: 991  AAISAIEENLDAS------------------RITMQHLKTAIRHVQPS 1020
            AA++ + + L+ +                  ++TMQ    A++++QP+
Sbjct: 412  AAMTRLRKFLNQNGKAIDLDRPIPTDMLNMIKVTMQDFMDAMKYIQPT 459



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/226 (45%), Positives = 139/226 (61%), Gaps = 31/226 (13%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+ P KGVLL GPPGTGKT LA+  A+++     ++NGPE+VS+ YGESE  L E+FD 
Sbjct: 209 LGIEPPKGVLLIGPPGTGKTLLAKAVANEADAYFVSINGPEIVSKYYGESEARLREIFDE 268

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A ++APA++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     V+VI ATNRPD+
Sbjct: 269 AKRNAPAIIFIDEIDSIAPKREEVTGEVEKRIVAQLLTLMDGLQERGQVVVIGATNRPDA 328

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS--- 615
           ++PALRRPGR DREI I M              P    RL+IL     G+     D    
Sbjct: 329 VDPALRRPGRFDREINIGM--------------PDKRARLDILSIHTRGVPLCTPDDVSN 374

Query: 616 --------------EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
                         ++E ++  THG+ GAD+AAL  EAA+  LR++
Sbjct: 375 CKGDNCPCKRGDEVDLEKIADMTHGYTGADIAALVKEAAMTRLRKF 420



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 76/143 (53%), Positives = 98/143 (68%), Gaps = 5/143 (3%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KG+LL GPPGTGKT LA+  A++SG N   V GPE++S+ +GESE+A+ E+
Sbjct: 500 FDELGVEPPKGILLFGPPGTGKTLLAKAVANESGANFIAVRGPEILSKWFGESEKAIREI 559

Query: 496 FDSASQSAPAVVFIDELDAIAPARK---DGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A  +AP VVF DE+DAIAPAR    D G   + R+V  +L  MDG+     V+VIAA
Sbjct: 560 FKKARMAAPCVVFFDEIDAIAPARGYRIDSGA--TDRIVNQILAEMDGIAPLRNVVVIAA 617

Query: 553 TNRPDSIEPALRRPGRLDREIEI 575
           TNRPD ++PAL RPGR DR I +
Sbjct: 618 TNRPDILDPALLRPGRFDRIIYV 640



 Score = 46.6 bits (109), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 10/80 (12%)

Query: 968  NIRELACLSEGCTGADISLICREAAISAIEENLDASR------ITMQHLKTAIRHVQPS- 1020
            ++RE    +   TGADI+ I REA++ A+ E + +++      +TM+H + A + VQPS 
Sbjct: 771  SLREFKLYASLYTGADIAAIVREASMMALREAITSTKTPSDVAVTMRHFQIAFQRVQPSL 830

Query: 1021 ---EIHSYKELSAKFQRLVH 1037
                +  Y E+S    R++ 
Sbjct: 831  SVEVLRKYDEMSRMLSRVIR 850


>gi|448284118|ref|ZP_21475382.1| ATPase AAA [Natrialba magadii ATCC 43099]
 gi|445571536|gb|ELY26084.1| ATPase AAA [Natrialba magadii ATCC 43099]
          Length = 752

 Score =  280 bits (717), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 191/307 (62%), Gaps = 16/307 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            A+++E  DF+ A   V PSA+REV +EVP   W++VGG    K +L E ++WP  +   F
Sbjct: 445  AIRIEDRDFQHAMSSVDPSALREVFVEVPDTSWDEVGGLETTKERLRETIQWPLAYSPVF 504

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
              +      G+L++GPPG  KTL+A+AVASEA  NF++VKGPEL +K+VGESEK VR +F
Sbjct: 505  DELHLSAANGVLLYGPPGTGKTLLAKAVASEAQSNFISVKGPELLNKYVGESEKGVREVF 564

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+NAP+++FFDEID +AA RG   D   V +RV+SQLL ELDGL +  +V VIA +N
Sbjct: 565  EKARSNAPTVVFFDEIDAIAAERGSGGDASGVQERVVSQLLTELDGLEELEDVVVIATSN 624

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGRFDR ++V  P+E  R EIF +H        DV +  LA  ++G  G
Sbjct: 625  RPDLIDDALLRPGRFDRQIHVPIPDEQARREIFAVHTAHRSIGDDVELARLAGRTQGYVG 684

Query: 982  ADISLICREAAISAIEENLDAS------------RITMQHLKTAIR----HVQPSEIHSY 1025
            AD+  ICREAA+ A  E +D               +T +H   AI+     V  +    Y
Sbjct: 685  ADVQAICREAAMEAAREYVDGVTPSDVDDGVGTITVTAEHFDHAIKSTSSSVNQAIKRRY 744

Query: 1026 KELSAKF 1032
            +EL  KF
Sbjct: 745  EELERKF 751



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/268 (42%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 768  EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 827
            E P + +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTL+A+
Sbjct: 198  EPPDITYEDIGGVDDELEQVREMIELPMRHPELFQQLGIDPPKGVLLHGPPGTGKTLIAK 257

Query: 828  AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 887
            AVA+E    F  + GPE+ S++ GESE+ +RS+F  A  NAP+++F DEID +A  R + 
Sbjct: 258  AVANEIDAFFTDISGPEIMSRYYGESEEQLRSVFEDATENAPAVVFIDEIDSIAPKRDET 317

Query: 888  SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 947
            S    V  R+++QLL  LDG+ +R  V VI ATNR + IDPAL R GRFDR + VG P+ 
Sbjct: 318  SG--DVERRIVAQLLSLLDGIEERGEVVVIGATNRLNAIDPALRRGGRFDREIEVGIPDR 375

Query: 948  TDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE---NLD--- 1001
              REEIF +H R +P S ++++ E A  + G  GADI  + +EAA+ A+     NLD   
Sbjct: 376  DGREEIFEVHTRGMPLSEEIDLSEYAVDTHGFVGADIEQLAKEAAMRALRRVRPNLDLEA 435

Query: 1002 ---------ASRITMQHLKTAIRHVQPS 1020
                     A RI  +  + A+  V PS
Sbjct: 436  DTIDAAALEAIRIEDRDFQHAMSSVDPS 463



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 144/235 (61%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 207 IGGVDDELEQVREMIELPMRHPELFQQLGIDPPKGVLLHGPPGTGKTLIAKAVANEIDAF 266

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              ++GPE++S+ YGESE+ L  VF+ A+++APAVVFIDE+D+IAP R +   ++ +R+V
Sbjct: 267 FTDISGPEIMSRYYGESEEQLRSVFEDATENAPAVVFIDEIDSIAPKRDETSGDVERRIV 326

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+L+DG+     V+VI ATNR ++I+PALRR GR DREIE+               +
Sbjct: 327 AQLLSLLDGIEERGEVVVIGATNRLNAIDPALRRGGRFDREIEV--------------GI 372

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EI      GM  S      EY ++ THGFVGAD+  L  EAA+  LRR
Sbjct: 373 PDRDGREEIFEVHTRGMPLSEEIDLSEY-AVDTHGFVGADIEQLAKEAAMRALRR 426



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/274 (38%), Positives = 149/274 (54%), Gaps = 18/274 (6%)

Query: 412 KLGGLSKEYAILKDIIISSSVKS-TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           ++GGL      L++ I      S     L L    GVLL+GPPGTGKT LA+  A ++  
Sbjct: 479 EVGGLETTKERLRETIQWPLAYSPVFDELHLSAANGVLLYGPPGTGKTLLAKAVASEAQS 538

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQ 528
           N  +V GPE++++  GESE+ + EVF+ A  +AP VVF DE+DAIA  R  GG+   + +
Sbjct: 539 NFISVKGPELLNKYVGESEKGVREVFEKARSNAPTVVFFDEIDAIAAERGSGGDASGVQE 598

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V+ LL  +DG+   + V+VIA +NRPD I+ AL RPGR DR+I +             
Sbjct: 599 RVVSQLLTELDGLEELEDVVVIATSNRPDLIDDALLRPGRFDRQIHV------------- 645

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
             +P    R EI  A+ +       D E+  L+  T G+VGAD+ A+C EAA+   R Y 
Sbjct: 646 -PIPDEQARREIF-AVHTAHRSIGDDVELARLAGRTQGYVGADVQAICREAAMEAAREYV 703

Query: 649 KIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRN 682
              T SDV    GT+     H D  ++ +  S N
Sbjct: 704 DGVTPSDVDDGVGTITVTAEHFDHAIKSTSSSVN 737


>gi|257388135|ref|YP_003177908.1| ATPase AAA [Halomicrobium mukohataei DSM 12286]
 gi|257170442|gb|ACV48201.1| AAA family ATPase, CDC48 subfamily [Halomicrobium mukohataei DSM
            12286]
          Length = 757

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 142/317 (44%), Positives = 205/317 (64%), Gaps = 13/317 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   DF++A   + PSA+REV +EVP   W+ VGG  + K +L E ++WP ++   F
Sbjct: 433  SLEVSKQDFKEALKGIEPSALREVFVEVPDTSWDSVGGLEDTKERLRETIQWPLEYPSVF 492

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++  +   G+L++GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 493  EQMDLQAAKGVLLYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKFVGESEKGVREVF 552

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            +KAR NAP+++FFDEID +AA RG       V +RV+SQLL ELDGL    +V VIA TN
Sbjct: 553  SKARENAPTVVFFDEIDSIAAERGSGGGDSQVGERVVSQLLTELDGLEAMEDVVVIATTN 612

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID AL+RPGR DR ++V  P+E  R  IF++H R  P +  V++ +LA  +EG  G
Sbjct: 613  RPDLIDSALIRPGRLDRHVHVPVPDEDARRAIFQVHTRGKPLADGVDLDQLARRTEGYVG 672

Query: 982  ADISLICREAAISAIEE--------NLDAS----RITMQHLKTAIRHVQPSEIHSYKELS 1029
            ADI  + REA+++A  E        ++D S    RITM H + A+  V PS     +E  
Sbjct: 673  ADIEAVAREASMAATREFINSVDPDDIDDSVSNVRITMDHFEQALDEVGPSVDEDVRERY 732

Query: 1030 AKF-QRLVHSNAEADES 1045
             +  +R  H+ AE D+ 
Sbjct: 733  DEIEERFDHAEAELDDG 749



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 112/266 (42%), Positives = 168/266 (63%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+AV
Sbjct: 188  PDVAYEDIGGLDSELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAV 247

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DEID +A  RG E+ 
Sbjct: 248  ANEIDAHFTTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKRG-ETQ 306

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R +V VI ATNR D IDPAL R GRFDR + +G P++  
Sbjct: 307  G-DVERRVVAQLLSLMDGLDERGDVIVIGATNRVDAIDPALRRGGRFDREIEIGVPDKEG 365

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R+EI ++H R +P S D+++   A  + G  GAD++ + +E A++A+             
Sbjct: 366  RKEILQVHTRGMPLSEDIDLESYAENTHGFVGADLAQLTKEGAMNALRRIRPDIDLESDE 425

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L++  ++ Q  K A++ ++PS
Sbjct: 426  IDAEVLESLEVSKQDFKEALKGIEPS 451



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/245 (45%), Positives = 152/245 (62%), Gaps = 16/245 (6%)

Query: 403 QATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           +AT +     +GGL  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A
Sbjct: 185 EATPDVAYEDIGGLDSELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMA 244

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
           +  A++   +  T++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDE+D+IAP R +
Sbjct: 245 KAVANEIDAHFTTISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKRGE 304

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
              ++ +R+VA LL+LMDG+     V+VI ATNR D+I+PALRR GR DREIEI      
Sbjct: 305 TQGDVERRVVAQLLSLMDGLDERGDVIVIGATNRVDAIDPALRRGGRFDREIEI------ 358

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
                    VP    R EIL     GM  S  D ++E  +  THGFVGADLA L  E A+
Sbjct: 359 --------GVPDKEGRKEILQVHTRGMPLS-EDIDLESYAENTHGFVGADLAQLTKEGAM 409

Query: 642 VCLRR 646
             LRR
Sbjct: 410 NALRR 414



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/217 (39%), Positives = 127/217 (58%), Gaps = 19/217 (8%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           S    + L+  KGVLL+GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + 
Sbjct: 490 SVFEQMDLQAAKGVLLYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKFVGESEKGVR 549

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVCRTDGVLVIA 551
           EVF  A ++AP VVF DE+D+IA  R  GG   ++ +R+V+ LL  +DG+   + V+VIA
Sbjct: 550 EVFSKARENAPTVVFFDEIDSIAAERGSGGGDSQVGERVVSQLLTELDGLEAMEDVVVIA 609

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
            TNRPD I+ AL RPGRLDR + +               VP    R  I      G    
Sbjct: 610 TTNRPDLIDSALIRPGRLDRHVHV--------------PVPDEDARRAIFQVHTRG--KP 653

Query: 612 LLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           L D  +++ L+  T G+VGAD+ A+  EA++   R +
Sbjct: 654 LADGVDLDQLARRTEGYVGADIEAVAREASMAATREF 690


>gi|448546193|ref|ZP_21626445.1| cell division control protein 48 [Haloferax sp. ATCC BAA-646]
 gi|448548192|ref|ZP_21627536.1| cell division control protein 48 [Haloferax sp. ATCC BAA-645]
 gi|448557379|ref|ZP_21632652.1| cell division control protein 48 [Haloferax sp. ATCC BAA-644]
 gi|445703036|gb|ELZ54972.1| cell division control protein 48 [Haloferax sp. ATCC BAA-646]
 gi|445714274|gb|ELZ66038.1| cell division control protein 48 [Haloferax sp. ATCC BAA-644]
 gi|445714894|gb|ELZ66652.1| cell division control protein 48 [Haloferax sp. ATCC BAA-645]
          Length = 754

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 137/291 (47%), Positives = 193/291 (66%), Gaps = 12/291 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             LK+   DF++A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F
Sbjct: 430  GLKVTEDDFKQALKSIEPSALREVFVEVPDVTWEDVGGLEPTKERLRETIQWPLEYPEVF 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 490  QQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +A  RG++S    V++RV+SQLL ELDGL    +V VIA TN
Sbjct: 550  KKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIATTN 609

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  I  +H R  P + DVN+  +A  ++G  G
Sbjct: 610  RPDLIDSALLRPGRLDRHVHVPVPDEDARRAILDVHTRNKPLADDVNLDRVASKTDGYVG 669

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            AD+  + REA+++A            I E++   R+TM+H + A+  +  S
Sbjct: 670  ADLEALAREASMNASREFIRSVEKEEIGESVGNVRVTMEHFEDALDEIGAS 720



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 164/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  R +   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEIGVPDRDG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + DV++ E A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEIMQVHTRNMPLTDDVDLDEYADSTHGFVGADLESLAKESAMHALRRIRPQLDLDAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K A++ ++PS
Sbjct: 423  IDAEVLEGLKVTEDDFKQALKSIEPS 448



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A++++PA+VFIDE+D+IAP R + G ++ +R+V
Sbjct: 252 FHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEAGGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EI+      M  +  D +++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 358 PDRDGRKEIMQVHTRNMPLT-DDVDLDEYADSTHGFVGADLESLAKESAMHALRR 411



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 134/246 (54%), Gaps = 23/246 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 488 VFQQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 547

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP VVF DE+D+IA    R      +++R+V+ LL  +DG+   + V+VIA 
Sbjct: 548 VFKKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIAT 607

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  IL   +      L
Sbjct: 608 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDEDARRAILD--VHTRNKPL 651

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLFEFE 667
            D   ++ ++  T G+VGADL AL  EA++   R + +     ++  S G    T+  FE
Sbjct: 652 ADDVNLDRVASKTDGYVGADLEALAREASMNASREFIRSVEKEEIGESVGNVRVTMEHFE 711

Query: 668 GHSDTM 673
              D +
Sbjct: 712 DALDEI 717


>gi|358370659|dbj|GAA87270.1| AAA family ATPase [Aspergillus kawachii IFO 4308]
          Length = 543

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 141/289 (48%), Positives = 196/289 (67%), Gaps = 6/289 (2%)

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
            G+   E G A+ ++ VD   A  + RP+AMREV LE PKV+W D+GGQ E+K +L +AVE
Sbjct: 238  GLATPETGIAIHIKDVDVLSALQETRPTAMREVFLETPKVRWSDIGGQHEIKRRLQKAVE 297

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P KH E  +R+      G+L++GPPGCSKTL  +A+A+EAGLNFLAVKG E+ S +VGE
Sbjct: 298  RPLKHPERMRRLNLTSKKGVLLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGE 357

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+A+R +F KAR+  PSIIFFDEID +A+ RG  S G      V++ LL E+DG+ +  
Sbjct: 358  SERALREIFRKARSARPSIIFFDEIDAIASKRGTSSQG---GVNVLTTLLNEMDGIEELK 414

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIREL 972
            +V VIAATN+P+ IDPAL+RPGR D +LY+GPP+   R+EI  I  RK   + +V +  L
Sbjct: 415  SVLVIAATNKPEVIDPALMRPGRLDNILYIGPPDYEARKEILDIWFRKSVINPEVEVDVL 474

Query: 973  ACLSEGCTGADISLICR---EAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            A  ++G +GA+I  IC    +AA+ A EE  +A  I  +H + A++ V+
Sbjct: 475  AMKTDGYSGAEIVSICETAGDAALDAEEETGEAQDIRWEHFEYALKQVK 523



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 122/226 (53%), Gaps = 26/226 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L L   KGVLL+GPPG  KT   +  A ++G+N   V G E++S   GESE+AL E+
Sbjct: 306 MRRLNLTSKKGVLLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGESERALREI 365

Query: 496 FDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A  + P+++F DE+DAIA  R     GG      ++ TLLN MDG+     VLVIAA
Sbjct: 366 FRKARSARPSIIFFDEIDAIASKRGTSSQGG----VNVLTTLLNEMDGIEELKSVLVIAA 421

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TN+P+ I+PAL RPGRLD           ++L   P   P    R EIL         S+
Sbjct: 422 TNKPEVIDPALMRPGRLD-----------NILYIGP---PDYEARKEILDIWF---RKSV 464

Query: 613 LDSEVE--YLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDV 656
           ++ EVE   L+M T G+ GA++ ++C  A    L    +   + D+
Sbjct: 465 INPEVEVDVLAMKTDGYSGAEIVSICETAGDAALDAEEETGEAQDI 510



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 19/183 (10%)

Query: 453 PGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDEL 512
           PG     +     H  G+ L+   G     +N G++E  +  +F  A +S P+ + ID++
Sbjct: 42  PGLDNLVMPSFYEHSRGILLYGPKG-TAFGRNIGDAESKMRNIFQEAMRSQPSAILIDQV 100

Query: 513 DAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDRE 572
           + IAP R       SQ + + L   +D   +   VL++AAT  P+ ++ ALR P RL  E
Sbjct: 101 EFIAPRRTSLD---SQSLASVLCECIDA-TKNAFVLIVAATRHPNDVDDALRTPHRLATE 156

Query: 573 IEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADL 632
           IE+               +P+   R +IL A+      +L D+ ++ ++  THG+VGADL
Sbjct: 157 IELH--------------IPTAQDRAKILRAICGSPSPALSDTLIDLIAEKTHGYVGADL 202

Query: 633 AAL 635
            AL
Sbjct: 203 FAL 205



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 35/186 (18%)

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           GIL++GP G +                        F + +G++E  +R++F +A  + PS
Sbjct: 58  GILLYGPKGTA------------------------FGRNIGDAESKMRNIFQEAMRSQPS 93

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            I  D+++ +A  R       S+  + ++ +L E     +   V ++AAT  P+ +D AL
Sbjct: 94  AILIDQVEFIAPRR------TSLDSQSLASVLCECIDATKNAFVLIVAATRHPNDVDDAL 147

Query: 931 LRPGRFDRLLYVGPPNETDREEIFR-IHLRKIPCSSDVNIRELACLSEGCTGAD----IS 985
             P R    + +  P   DR +I R I     P  SD  I  +A  + G  GAD    + 
Sbjct: 148 RTPHRLATEIELHIPTAQDRAKILRAICGSPSPALSDTLIDLIAEKTHGYVGADLFALLQ 207

Query: 986 LICREA 991
           LI R+A
Sbjct: 208 LISRKA 213


>gi|448583338|ref|ZP_21646694.1| cell division control protein 48 [Haloferax gibbonsii ATCC 33959]
 gi|445729567|gb|ELZ81162.1| cell division control protein 48 [Haloferax gibbonsii ATCC 33959]
          Length = 754

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 136/291 (46%), Positives = 194/291 (66%), Gaps = 12/291 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             LK+   DF +A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F
Sbjct: 430  GLKVTEDDFRQALKSIEPSALREVFVEVPDVTWEDVGGLESTKERLRETIQWPLEYPEVF 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 490  QQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +A  RG++S    V++RV+SQLL ELDGL    +V VIA TN
Sbjct: 550  KKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIATTN 609

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  I  +H R+ P + DV++ ++A  ++G  G
Sbjct: 610  RPDLIDSALLRPGRLDRHVHVPVPDEDARRAILDVHTREKPLADDVDLDKIASKTDGYVG 669

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            AD+  + REA+++A            I E++   R+TM+H + A+  +  S
Sbjct: 670  ADLEALAREASMNASREFIRSVEKEDIGESVGNVRVTMEHFENALDEIGAS 720



 Score =  214 bits (546), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/266 (40%), Positives = 163/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  R +   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEIGVPDRDG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + DV++   A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEIMQVHTRNMPLTDDVDLDAYADSTHGFVGADLESLAKESAMHALRRIRPQLDLDAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    + A++ ++PS
Sbjct: 423  IDAEVLEGLKVTEDDFRQALKSIEPS 448



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A++++PA+VFIDE+D+IAP R + G ++ +R+V
Sbjct: 252 FHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEAGGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EI+      M  +  D +++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 358 PDRDGRKEIMQVHTRNMPLT-DDVDLDAYADSTHGFVGADLESLAKESAMHALRR 411



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/246 (36%), Positives = 136/246 (55%), Gaps = 23/246 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 488 VFQQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 547

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP VVF DE+D+IA    R      +++R+V+ LL  +DG+   + V+VIA 
Sbjct: 548 VFKKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIAT 607

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  IL   +   E  L
Sbjct: 608 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDEDARRAILD--VHTREKPL 651

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLFEFE 667
            D  +++ ++  T G+VGADL AL  EA++   R + +     D+  S G    T+  FE
Sbjct: 652 ADDVDLDKIASKTDGYVGADLEALAREASMNASREFIRSVEKEDIGESVGNVRVTMEHFE 711

Query: 668 GHSDTM 673
              D +
Sbjct: 712 NALDEI 717


>gi|386001603|ref|YP_005919902.1| AAA ATPase [Methanosaeta harundinacea 6Ac]
 gi|357209659|gb|AET64279.1| AAA family ATPase, CDC48 subfamily [Methanosaeta harundinacea 6Ac]
          Length = 760

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 135/290 (46%), Positives = 192/290 (66%), Gaps = 4/290 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D E A  +V PSA+RE+++EVP V W DVGG   VK  L+EAVEWP  + E F+R+G   
Sbjct: 455  DLEAAMHEVSPSALREILIEVPNVTWADVGGLEGVKQLLVEAVEWPLVYGENFRRLGIEA 514

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+A+AVA+E+  NFL  KG E+ SKW GESE+ +  +F KAR  A
Sbjct: 515  PKGVLLYGPPGTGKTLLAKAVANESNANFLTTKGSEILSKWYGESERHIAEIFRKARQVA 574

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+I+F DE+D LA +RG  +    V++R+++QLL E+DG+ +   V VIAATNRPD IDP
Sbjct: 575  PAIVFLDELDSLAPVRGGGTGEPHVTERIVNQLLSEIDGMEELRGVVVIAATNRPDIIDP 634

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+RPGRFD L+ V  P+   R +IF +H  K+P + DV++  L   ++  TGADI+ IC
Sbjct: 635  ALIRPGRFDELIMVPVPDAASRRKIFAVHTGKMPLAEDVDLDRLVERTDQYTGADIASIC 694

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 1034
            R+A   A+ E+++A  +   H   A+  V PS     +  Y +LS + ++
Sbjct: 695  RKAGRLALREDMNAVEVRKSHFLAALEEVGPSVTPDTMKYYAKLSGELRK 744



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 114/268 (42%), Positives = 167/268 (62%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V +ED+GG +    ++ E +E P KH E F+R+G  PP G+L+ GPPG  KT++A+AVA
Sbjct: 204  EVVYEDLGGMKHAIQRVREMIELPLKHPELFERLGIDPPRGVLLHGPPGTGKTMLAKAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E+  +F ++ GPE+ SK+ GESEK +R +F ++  NAP+IIF DE+D +A  R  E   
Sbjct: 264  NESSAHFASINGPEIVSKYYGESEKRIREVFEESERNAPAIIFLDELDSIAPKR--EEVA 321

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              +  R+++QLL  +DG  +R NV VI ATNRPD +DPAL RPGRFDR + +G P+   R
Sbjct: 322  GEMERRMVAQLLSLMDGQKERANVIVIGATNRPDAVDPALRRPGRFDREIELGVPDFEGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-------------- 996
             EI +IH R +P + DV++ E A L+ G  GADI+   REAA++A+              
Sbjct: 382  REILQIHTRGMPLAQDVDLEEFATLTYGFVGADIAAFSREAAMNALRRVLPRIDLDEPTI 441

Query: 997  -EENLDASRITMQHLKTAIRHVQPSEIH 1023
              E L+   +T   L+ A+  V PS + 
Sbjct: 442  PREILEELVVTRGDLEAAMHEVSPSALR 469



 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/247 (44%), Positives = 155/247 (62%), Gaps = 16/247 (6%)

Query: 401 NVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTS 459
           + +A  E     LGG+      ++++I +          LG+ P +GVLLHGPPGTGKT 
Sbjct: 198 DAKAAAEVVYEDLGGMKHAIQRVREMIELPLKHPELFERLGIDPPRGVLLHGPPGTGKTM 257

Query: 460 LARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR 519
           LA+  A++S  +  ++NGPE+VS+ YGESE+ + EVF+ + ++APA++F+DELD+IAP R
Sbjct: 258 LAKAVANESSAHFASINGPEIVSKYYGESEKRIREVFEESERNAPAIIFLDELDSIAPKR 317

Query: 520 KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSF 579
           ++   E+ +RMVA LL+LMDG      V+VI ATNRPD+++PALRRPGR DREIE+    
Sbjct: 318 EEVAGEMERRMVAQLLSLMDGQKERANVIVIGATNRPDAVDPALRRPGRFDREIEL---- 373

Query: 580 LFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
                      VP    R EIL     GM  +  D ++E  +  T+GFVGAD+AA   EA
Sbjct: 374 ----------GVPDFEGRREILQIHTRGMPLA-QDVDLEEFATLTYGFVGADIAAFSREA 422

Query: 640 ALVCLRR 646
           A+  LRR
Sbjct: 423 AMNALRR 429



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 17/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+   KGVLL+GPPGTGKT LA+  A++S  N  T  G E++S+ YGESE+ + E+F  
Sbjct: 510 LGIEAPKGVLLYGPPGTGKTLLAKAVANESNANFLTTKGSEILSKWYGESERHIAEIFRK 569

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A Q APA+VF+DELD++AP R  G  E  +++R+V  LL+ +DG+    GV+VIAATNRP
Sbjct: 570 ARQVAPAIVFLDELDSLAPVRGGGTGEPHVTERIVNQLLSEIDGMEELRGVVVIAATNRP 629

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           D I+PAL RPGR D  I +               VP  A R +I  A+ +G      D +
Sbjct: 630 DIIDPALIRPGRFDELIMV--------------PVPDAASRRKIF-AVHTGKMPLAEDVD 674

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           ++ L   T  + GAD+A++C +A  + LR
Sbjct: 675 LDRLVERTDQYTGADIASICRKAGRLALR 703


>gi|435847095|ref|YP_007309345.1| AAA family ATPase, CDC48 subfamily [Natronococcus occultus SP4]
 gi|433673363|gb|AGB37555.1| AAA family ATPase, CDC48 subfamily [Natronococcus occultus SP4]
          Length = 732

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 141/320 (44%), Positives = 200/320 (62%), Gaps = 13/320 (4%)

Query: 729  DSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLM 788
            DS GG         +++   D E A  ++ PSAMREV +EVP   W D+GG  + K  L 
Sbjct: 411  DSPGGRSELSIDGPIEIGEPDVEAALREIEPSAMREVFVEVPDAGWTDIGGLEDAKRTLR 470

Query: 789  EAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSK 848
            EA++WP ++ +AF R+  RP TG+L++GPPG  KTL+ARAVA+EA  NF+++KGPEL  K
Sbjct: 471  EAIQWPLEYADAFDRVSLRPATGVLLYGPPGTGKTLLARAVANEAQSNFISIKGPELVDK 530

Query: 849  WVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGL 908
            +VGESE+ +R++F+KAR NAP+++ FDEID +A  R  ES   +V +RV+SQLL ELDGL
Sbjct: 531  YVGESERGIRNVFSKARENAPTVLVFDEIDAIAGTR-NESGETAVGERVVSQLLTELDGL 589

Query: 909  HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN 968
                +V V+A TNRPD+ID ALLR GRF+R + VG P+   R EIF +HLR  P + DV+
Sbjct: 590  EDLEDVVVLATTNRPDRIDDALLRAGRFERHVRVGEPDRGARREIFEVHLRDRPLADDVD 649

Query: 969  IRELACLSEGCTGADISLICREAAISAIEE------------NLDASRITMQHLKTAIRH 1016
            +  LA  +EG  GA I  ICR AA++A+ +            +L+   +T +H + A+  
Sbjct: 650  LETLAERTEGTVGAAIEGICRTAAMNAVRDYVEDAPNAGSPPDLETLVLTAEHFERALER 709

Query: 1017 VQPSEIHSYKELSAKFQRLV 1036
                    +   +  F  L+
Sbjct: 710  TDGESADEFGRSADGFDALL 729



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 108/264 (40%), Positives = 159/264 (60%), Gaps = 16/264 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V ++DVGG  E   ++ E VE P ++ + F R+G  PP G+L++GPPG  KTL+ARA+
Sbjct: 182  PAVTYDDVGGLAEELDRVREVVELPMRYPDVFDRLGIEPPKGVLLYGPPGTGKTLIARAM 241

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E G +F  ++GPE+ SK+ GESE+ +R +FA+A  NAP+I+F DEID +A    K  D
Sbjct: 242  ANEVGAHFQTLRGPEIVSKYYGESEERLREVFAEAEENAPAIVFVDEIDAIAP---KRED 298

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
                  R+++QLL  LDG   R  V V+  TNR D +DPAL RPGRFDR + +G P+  +
Sbjct: 299  VGDAERRIVAQLLSLLDGGDSRGQVVVMGTTNRVDSVDPALRRPGRFDREIEIGVPDADE 358

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI------------E 997
            R EI  IH   +  S DV++   A  + G  GAD+  + RE+A+ A+            E
Sbjct: 359  RAEILDIHAADVSLSEDVDLERYAERTHGFVGADLENLIRESAMCALRRLREDSPGGRSE 418

Query: 998  ENLDAS-RITMQHLKTAIRHVQPS 1020
             ++D    I    ++ A+R ++PS
Sbjct: 419  LSIDGPIEIGEPDVEAALREIEPS 442



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/354 (37%), Positives = 188/354 (53%), Gaps = 49/354 (13%)

Query: 296 EDESAIKLLQTCAASWLYSRSLLCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQV 355
           ED S+   L+      L  R L     V V + +E       G+  +P ++ +    P V
Sbjct: 100 EDVSSKAALEFAQRDTLVGRVLSDAETVTVSLAAESGA----GSRSVPIEVVDLEPTPPV 155

Query: 356 TESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGG 415
                      V+   T V L P   ++  + R+   P   + + +V           GG
Sbjct: 156 -----------VVEDWTSVVLSPEAASIDDTERD--QPTPAVTYDDV-----------GG 191

Query: 416 LSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFT 474
           L++E   +++++ +          LG+ P KGVLL+GPPGTGKT +AR  A++ G +  T
Sbjct: 192 LAEELDRVREVVELPMRYPDVFDRLGIEPPKGVLLYGPPGTGKTLIARAMANEVGAHFQT 251

Query: 475 VNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATL 534
           + GPE+VS+ YGESE+ L EVF  A ++APA+VF+DE+DAIAP R+D G +  +R+VA L
Sbjct: 252 LRGPEIVSKYYGESEERLREVFAEAEENAPAIVFVDEIDAIAPKREDVG-DAERRIVAQL 310

Query: 535 LNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP 594
           L+L+DG      V+V+  TNR DS++PALRRPGR DREIEI               VP  
Sbjct: 311 LSLLDGGDSRGQVVVMGTTNRVDSVDPALRRPGRFDREIEI--------------GVPDA 356

Query: 595 AQRLEIL--HALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            +R EIL  HA    +     D ++E  +  THGFVGADL  L  E+A+  LRR
Sbjct: 357 DERAEILDIHAADVSLSE---DVDLERYAERTHGFVGADLENLIRESAMCALRR 407



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/240 (36%), Positives = 129/240 (53%), Gaps = 19/240 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL      L++ I            + LRP  GVLL+GPPGTGKT LAR  A+++ 
Sbjct: 457 TDIGGLEDAKRTLREAIQWPLEYADAFDRVSLRPATGVLLYGPPGTGKTLLARAVANEAQ 516

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE-ELSQ 528
            N  ++ GPE+V +  GESE+ +  VF  A ++AP V+  DE+DAIA  R + GE  + +
Sbjct: 517 SNFISIKGPELVDKYVGESERGIRNVFSKARENAPTVLVFDEIDAIAGTRNESGETAVGE 576

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V+ LL  +DG+   + V+V+A TNRPD I+ AL R GR +R + +             
Sbjct: 577 RVVSQLLTELDGLEDLEDVVVLATTNRPDRIDDALLRAGRFERHVRV------------- 623

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
              P    R EI    L   +  L D  ++E L+  T G VGA +  +C  AA+  +R Y
Sbjct: 624 -GEPDRGARREIFEVHLR--DRPLADDVDLETLAERTEGTVGAAIEGICRTAAMNAVRDY 680


>gi|448565388|ref|ZP_21636255.1| cell division control protein 48 [Haloferax prahovense DSM 18310]
 gi|445715132|gb|ELZ66888.1| cell division control protein 48 [Haloferax prahovense DSM 18310]
          Length = 754

 Score =  279 bits (714), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 136/291 (46%), Positives = 194/291 (66%), Gaps = 12/291 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             LK+   DF +A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F
Sbjct: 430  GLKVTEDDFRQALKSIEPSALREVFVEVPDVTWEDVGGLEPTKERLRETIQWPLEYPEVF 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 490  QQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +A  RG++S    V++RV+SQLL ELDGL    +V VIA TN
Sbjct: 550  KKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIATTN 609

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  I  +H R+ P + DV++ ++A  ++G  G
Sbjct: 610  RPDLIDSALLRPGRLDRHVHVPVPDEDARRAILDVHTREKPLADDVDLDKIASKTDGYVG 669

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            AD+  + REA+++A            I E++   R+TM+H + A+  +  S
Sbjct: 670  ADLEALAREASMNASREFIRSVEKEDIGESVGNVRVTMEHFENALDEIGAS 720



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/266 (40%), Positives = 163/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  R +   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEIGVPDRDG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + DV++   A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEIMQVHTRNMPLTDDVDLDAYADSTHGFVGADLESLAKESAMHALRRIRPQLDLDAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    + A++ ++PS
Sbjct: 423  IDAEVLEGLKVTEDDFRQALKSIEPS 448



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A++++PA+VFIDE+D+IAP R + G ++ +R+V
Sbjct: 252 FHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEAGGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EI+      M  +  D +++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 358 PDRDGRKEIMQVHTRNMPLT-DDVDLDAYADSTHGFVGADLESLAKESAMHALRR 411



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/246 (36%), Positives = 136/246 (55%), Gaps = 23/246 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 488 VFQQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 547

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP VVF DE+D+IA    R      +++R+V+ LL  +DG+   + V+VIA 
Sbjct: 548 VFKKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIAT 607

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  IL   +   E  L
Sbjct: 608 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDEDARRAILD--VHTREKPL 651

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLFEFE 667
            D  +++ ++  T G+VGADL AL  EA++   R + +     D+  S G    T+  FE
Sbjct: 652 ADDVDLDKIASKTDGYVGADLEALAREASMNASREFIRSVEKEDIGESVGNVRVTMEHFE 711

Query: 668 GHSDTM 673
              D +
Sbjct: 712 NALDEI 717


>gi|433422020|ref|ZP_20405896.1| cell division control protein 48 [Haloferax sp. BAB2207]
 gi|432198739|gb|ELK54989.1| cell division control protein 48 [Haloferax sp. BAB2207]
          Length = 762

 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 136/291 (46%), Positives = 194/291 (66%), Gaps = 12/291 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             LK+   DF++A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F
Sbjct: 438  GLKVTEDDFKQALKSIEPSALREVFVEVPDVTWEDVGGLEPTKERLRETIQWPLEYPEVF 497

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 498  QQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 557

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +A  RG++S    V++RV+SQLL ELDGL    +V VIA TN
Sbjct: 558  KKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIATTN 617

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  I  +H R+ P + DV++ ++A  ++G  G
Sbjct: 618  RPDLIDSALLRPGRLDRHVHVPVPDEDARRAILDVHTREKPLADDVDLDKIASKTDGYVG 677

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            AD+  + REA+++A            I E++   R+TM H + A+  +  S
Sbjct: 678  ADLEALAREASMNASREFIRSVEKEEIGESVGNVRVTMDHFEDALDEIGAS 728



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 113/267 (42%), Positives = 162/267 (60%), Gaps = 18/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG  +    + E +E P    E F  +G  PP G+L+ GPPG  KTL+A+AVA+
Sbjct: 196  VTYEDIGGLDDELDLVREMIELPLSEPEVFAHLGIEPPKGVLLHGPPGTGKTLIAKAVAN 255

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F  + GPE+ SK+ GESE+ +R +F  AR NAP+IIFFDEID +A+   K  DG 
Sbjct: 256  EVDASFTTISGPEVLSKYKGESEEKLREVFQSARENAPAIIFFDEIDSIAS---KRDDGG 312

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             + +RV+ QLL  +DGL  R +V VI ATNR D +DPAL R GRFDR + +G PNE  R 
Sbjct: 313  DLENRVVGQLLSLMDGLDARGDVVVIGATNRVDSLDPALRRGGRFDREIEIGVPNEAGRR 372

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------ENLD 1001
            EI  +H R++P + DV+I  LA  + G  GAD+  + +E+A+ A+           E +D
Sbjct: 373  EILDVHTRRMPLAEDVDIDRLASRTHGFVGADLESLAKESAMHALRRIRPQLDLDAEEID 432

Query: 1002 AS-----RITMQHLKTAIRHVQPSEIH 1023
            A      ++T    K A++ ++PS + 
Sbjct: 433  AEVLEGLKVTEDDFKQALKSIEPSALR 459



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/235 (46%), Positives = 151/235 (64%), Gaps = 17/235 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E  +++++I +  S     + LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 201 IGGLDDELDLVREMIELPLSEPEVFAHLGIEPPKGVLLHGPPGTGKTLIAKAVANEVDAS 260

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPEV+S+  GESE+ L EVF SA ++APA++F DE+D+IA  R DGG +L  R+V
Sbjct: 261 FTTISGPEVLSKYKGESEEKLREVFQSARENAPAIIFFDEIDSIASKRDDGG-DLENRVV 319

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
             LL+LMDG+     V+VI ATNR DS++PALRR GR DREIEI               V
Sbjct: 320 GQLLSLMDGLDARGDVVVIGATNRVDSLDPALRRGGRFDREIEI--------------GV 365

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P+ A R EIL      M  +  D +++ L+  THGFVGADL +L  E+A+  LRR
Sbjct: 366 PNEAGRREILDVHTRRMPLA-EDVDIDRLASRTHGFVGADLESLAKESAMHALRR 419



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 23/245 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              + +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + EV
Sbjct: 497 FQQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREV 556

Query: 496 FDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A ++AP VVF DE+D+IA    R      +++R+V+ LL  +DG+   + V+VIA T
Sbjct: 557 FKKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIATT 616

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+ AL RPGRLDR + +               VP    R  IL   +   E  L 
Sbjct: 617 NRPDLIDSALLRPGRLDRHVHV--------------PVPDEDARRAILD--VHTREKPLA 660

Query: 614 DS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLFEFEG 668
           D  +++ ++  T G+VGADL AL  EA++   R + +     ++  S G    T+  FE 
Sbjct: 661 DDVDLDKIASKTDGYVGADLEALAREASMNASREFIRSVEKEEIGESVGNVRVTMDHFED 720

Query: 669 HSDTM 673
             D +
Sbjct: 721 ALDEI 725


>gi|317034545|ref|XP_001400631.2| AAA family ATPase [Aspergillus niger CBS 513.88]
 gi|350639165|gb|EHA27519.1| hypothetical protein ASPNIDRAFT_41453 [Aspergillus niger ATCC 1015]
          Length = 751

 Score =  279 bits (713), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 141/289 (48%), Positives = 194/289 (67%), Gaps = 6/289 (2%)

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
            G    E G A+ ++ VD   A  + RP+AMREV LE PKV+W D+GGQ E+K +L +AVE
Sbjct: 446  GPITQEPGTAIHIKDVDVLSALQETRPTAMREVFLETPKVRWSDIGGQHEIKRRLQKAVE 505

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P KH E  +R+      G+L++GPPGCSKTL  +A+A+EAGLNFLAVKG E+ S +VGE
Sbjct: 506  RPLKHPERMRRLNLTSKKGVLLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGE 565

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+A+R +F KAR+  PSIIFFDEID +A+ RG  S G      V++ LL E+DG+ +  
Sbjct: 566  SERALREIFRKARSARPSIIFFDEIDAIASKRGTSSQG---GVNVLTTLLNEMDGIEELK 622

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIREL 972
            +V VIAATN+P+ IDPAL+RPGR D +LY+GPP+   R+EI  I  RK   + +V +  L
Sbjct: 623  SVLVIAATNKPEVIDPALMRPGRLDNILYIGPPDYEARKEILDIWFRKSVINPEVEVDVL 682

Query: 973  ACLSEGCTGADISLICR---EAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            A  ++G +GA+I  IC    +AA+ A EE   A  I  +H + A++ V+
Sbjct: 683  AMKTDGYSGAEIVSICETAGDAALDAEEETGQAQDIRWEHFEYALKQVK 731



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 121/223 (54%), Gaps = 20/223 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L L   KGVLL+GPPG  KT   +  A ++G+N   V G E++S   GESE+AL E+
Sbjct: 514 MRRLNLTSKKGVLLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGESERALREI 573

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A  + P+++F DE+DAIA  R    +     ++ TLLN MDG+     VLVIAATN+
Sbjct: 574 FRKARSARPSIIFFDEIDAIASKRGTSSQG-GVNVLTTLLNEMDGIEELKSVLVIAATNK 632

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P+ I+PAL RPGRLD           ++L   P   P    R EIL         S+++ 
Sbjct: 633 PEVIDPALMRPGRLD-----------NILYIGP---PDYEARKEILDIWF---RKSVINP 675

Query: 616 EVE--YLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDV 656
           EVE   L+M T G+ GA++ ++C  A    L    +   + D+
Sbjct: 676 EVEVDVLAMKTDGYSGAEIVSICETAGDAALDAEEETGQAQDI 718



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 19/192 (9%)

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
           ++G+LL+GP GTGKT+L            F + G     +N G++E  L  VF  A +  
Sbjct: 241 SRGILLYGPKGTGKTALLEQIKAAGWRQTFHI-GSSAFGRNIGDAESKLRNVFQEAMRCQ 299

Query: 504 PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPAL 563
           P+ + ID+++ IAP R       SQ + + L   +D   +   +L++AAT  P+ ++ AL
Sbjct: 300 PSAILIDQVEFIAPRRTSLD---SQSLASVLCECIDAT-KNAFILIVAATRHPNDVDDAL 355

Query: 564 RRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA 623
           R P RL  EIE+               +P+   R +IL A+  G   +L D+ ++ ++  
Sbjct: 356 RTPHRLATEIELH--------------IPTAHDRAQILRAICGGPSPALSDTLIDMIAEK 401

Query: 624 THGFVGADLAAL 635
           THG+VGADL AL
Sbjct: 402 THGYVGADLFAL 413



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 12/186 (6%)

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           GIL++GP G  KT +   + + AG       G   F + +G++E  +R++F +A    PS
Sbjct: 243 GILLYGPKGTGKTALLEQIKA-AGWRQTFHIGSSAFGRNIGDAESKLRNVFQEAMRCQPS 301

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            I  D+++ +A  R       S+  + ++ +L E     +   + ++AAT  P+ +D AL
Sbjct: 302 AILIDQVEFIAPRR------TSLDSQSLASVLCECIDATKNAFILIVAATRHPNDVDDAL 355

Query: 931 LRPGRFDRLLYVGPPNETDREEIFR-IHLRKIPCSSDVNIRELACLSEGCTGAD----IS 985
             P R    + +  P   DR +I R I     P  SD  I  +A  + G  GAD    + 
Sbjct: 356 RTPHRLATEIELHIPTAHDRAQILRAICGGPSPALSDTLIDMIAEKTHGYVGADLFALLQ 415

Query: 986 LICREA 991
           LI R+A
Sbjct: 416 LISRKA 421


>gi|386875474|ref|ZP_10117642.1| AAA family ATPase, CDC48 family protein [Candidatus Nitrosopumilus
            salaria BD31]
 gi|386806718|gb|EIJ66169.1| AAA family ATPase, CDC48 family protein [Candidatus Nitrosopumilus
            salaria BD31]
          Length = 703

 Score =  279 bits (713), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 132/286 (46%), Positives = 195/286 (68%), Gaps = 7/286 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+   DF  A  +VRPSA+REV++++P V W+DVGG  E+K +L EA+EWP K++ AF 
Sbjct: 418  IKITSQDFTDALKEVRPSALREVLVQIPNVSWDDVGGLDELKEELREAIEWPLKYKGAFD 477

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
                +PP G+L++GPPG  KTL+A+AVA+    NF+++KGPEL SKWVGESEK VR +F 
Sbjct: 478  YAHVKPPKGVLLYGPPGTGKTLIAKAVATTTESNFISIKGPELLSKWVGESEKGVREIFR 537

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP IIFFDEID L   RG       V++ V+SQ+L E+DGL +  NV +I ATNR
Sbjct: 538  KARMAAPCIIFFDEIDALVPKRGSGGSDSHVTENVVSQILTEIDGLEELNNVLIIGATNR 597

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             D +DPALLRPGRFDR++ V  P+    E IF+IH ++ P   +VN++ LA +++G +GA
Sbjct: 598  LDIVDPALLRPGRFDRVIEVPNPDVAGIEMIFKIHTKEKPLEENVNLKTLAEMAKGFSGA 657

Query: 983  DISLICREAAISAI-------EENLDASRITMQHLKTAIRHVQPSE 1021
            +I  +C  AA+  +       E+++ + +IT + L+ ++  ++ ++
Sbjct: 658  EIEEVCNRAALLGVKRFVENKEKDVKSIKITQKDLEDSVEQIKKTK 703



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 112/267 (41%), Positives = 168/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP+  ++D+GG +    ++ E VE P +H E F++IG   P G+L++GPPG  KTL+A+A
Sbjct: 171  VPRFTYDDLGGLKNEILKIREMVELPMRHPELFEKIGIESPKGVLLYGPPGTGKTLLAKA 230

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA E   +F ++ GPE+ +K  GESE+ +R +F +A  NAPSIIF DEID +A  R +E 
Sbjct: 231  VAGETNSHFTSLSGPEIMAKHYGESEEKLREIFTQAEENAPSIIFIDEIDSIAPKR-EEV 289

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  +  R++SQLL  +DG+  R  V VIAATNRPD IDPAL RPGRFDR + +G P++ 
Sbjct: 290  SG-ELEKRIVSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEIGIPDDE 348

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI------------ 996
             R E+  IH R +P    V++++++  + G  GAD+ ++C+EAA+ ++            
Sbjct: 349  GRLEVLNIHTRGMPLDKKVDLKKISKTTHGFVGADLEVLCKEAAMKSLRRILPEINLEEE 408

Query: 997  ---EENLDASRITMQHLKTAIRHVQPS 1020
               +E L   +IT Q    A++ V+PS
Sbjct: 409  KVSKEILQKIKITSQDFTDALKEVRPS 435



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/237 (45%), Positives = 154/237 (64%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGGL  E   +++++ +          +G+   KGVLL+GPPGTGKT LA+  A ++  +
Sbjct: 179 LGGLKNEILKIREMVELPMRHPELFEKIGIESPKGVLLYGPPGTGKTLLAKAVAGETNSH 238

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE+++++YGESE+ L E+F  A ++AP+++FIDE+D+IAP R++   EL +R+V
Sbjct: 239 FTSLSGPEIMAKHYGESEEKLREIFTQAEENAPSIIFIDEIDSIAPKREEVSGELEKRIV 298

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VIAATNRPDSI+PALRRPGR DREIEI               +
Sbjct: 299 SQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEI--------------GI 344

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLRR 646
           P    RLE+L+    GM    LD +V+   +S  THGFVGADL  LC EAA+  LRR
Sbjct: 345 PDDEGRLEVLNIHTRGMP---LDKKVDLKKISKTTHGFVGADLEVLCKEAAMKSLRR 398



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 127/210 (60%), Gaps = 19/210 (9%)

Query: 441 LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSAS 500
           ++P KGVLL+GPPGTGKT +A+  A  +  N  ++ GPE++S+  GESE+ + E+F  A 
Sbjct: 481 VKPPKGVLLYGPPGTGKTLIAKAVATTTESNFISIKGPELLSKWVGESEKGVREIFRKAR 540

Query: 501 QSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
            +AP ++F DE+DA+ P R  GG +  +++ +V+ +L  +DG+   + VL+I ATNR D 
Sbjct: 541 MAAPCIIFFDEIDALVPKRGSGGSDSHVTENVVSQILTEIDGLEELNNVLIIGATNRLDI 600

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP-AQRLEILHALLSGMEHSLLDSEV 617
           ++PAL RPGR DR IE                VP+P    +E++  + +  +    +  +
Sbjct: 601 VDPALLRPGRFDRVIE----------------VPNPDVAGIEMIFKIHTKEKPLEENVNL 644

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRRY 647
           + L+    GF GA++  +CN AAL+ ++R+
Sbjct: 645 KTLAEMAKGFSGAEIEEVCNRAALLGVKRF 674


>gi|448568299|ref|ZP_21637876.1| cell division control protein 48 [Haloferax lucentense DSM 14919]
 gi|448600761|ref|ZP_21656140.1| cell division control protein 48 [Haloferax alexandrinus JCM 10717]
 gi|445727249|gb|ELZ78863.1| cell division control protein 48 [Haloferax lucentense DSM 14919]
 gi|445734774|gb|ELZ86330.1| cell division control protein 48 [Haloferax alexandrinus JCM 10717]
          Length = 754

 Score =  278 bits (712), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 136/291 (46%), Positives = 194/291 (66%), Gaps = 12/291 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             LK+   DF++A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F
Sbjct: 430  GLKVTEDDFKQALKSIEPSALREVFVEVPDVTWEDVGGLEPTKERLRETIQWPLEYPEVF 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 490  QQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +A  RG++S    V++RV+SQLL ELDGL    +V VIA TN
Sbjct: 550  KKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIATTN 609

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  I  +H R+ P + DV++ ++A  ++G  G
Sbjct: 610  RPDLIDSALLRPGRLDRHVHVPVPDEDARRAILDVHTREKPLADDVDLDKIASKTDGYVG 669

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            AD+  + REA+++A            I E++   R+TM H + A+  +  S
Sbjct: 670  ADLEALAREASMNASREFIRSVEKEEIGESVGNVRVTMDHFEDALDEIGAS 720



 Score =  218 bits (555), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 164/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  R +   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEIGVPDRDG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + DV++ E A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEIMQVHTRNMPLTDDVDLDEYADSTHGFVGADLESLAKESAMHALRRIRPQLDLDAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K A++ ++PS
Sbjct: 423  IDAEVLEGLKVTEDDFKQALKSIEPS 448



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A++++PA+VFIDE+D+IAP R + G ++ +R+V
Sbjct: 252 FHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEAGGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EI+      M  +  D +++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 358 PDRDGRKEIMQVHTRNMPLT-DDVDLDEYADSTHGFVGADLESLAKESAMHALRR 411



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 136/246 (55%), Gaps = 23/246 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 488 VFQQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 547

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP VVF DE+D+IA    R      +++R+V+ LL  +DG+   + V+VIA 
Sbjct: 548 VFKKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIAT 607

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  IL   +   E  L
Sbjct: 608 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDEDARRAILD--VHTREKPL 651

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLFEFE 667
            D  +++ ++  T G+VGADL AL  EA++   R + +     ++  S G    T+  FE
Sbjct: 652 ADDVDLDKIASKTDGYVGADLEALAREASMNASREFIRSVEKEEIGESVGNVRVTMDHFE 711

Query: 668 GHSDTM 673
              D +
Sbjct: 712 DALDEI 717


>gi|134081298|emb|CAK41801.1| unnamed protein product [Aspergillus niger]
          Length = 728

 Score =  278 bits (712), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 141/289 (48%), Positives = 194/289 (67%), Gaps = 6/289 (2%)

Query: 733  GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
            G    E G A+ ++ VD   A  + RP+AMREV LE PKV+W D+GGQ E+K +L +AVE
Sbjct: 423  GPITQEPGTAIHIKDVDVLSALQETRPTAMREVFLETPKVRWSDIGGQHEIKRRLQKAVE 482

Query: 793  WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
             P KH E  +R+      G+L++GPPGCSKTL  +A+A+EAGLNFLAVKG E+ S +VGE
Sbjct: 483  RPLKHPERMRRLNLTSKKGVLLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGE 542

Query: 853  SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
            SE+A+R +F KAR+  PSIIFFDEID +A+ RG  S G      V++ LL E+DG+ +  
Sbjct: 543  SERALREIFRKARSARPSIIFFDEIDAIASKRGTSSQG---GVNVLTTLLNEMDGIEELK 599

Query: 913  NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIREL 972
            +V VIAATN+P+ IDPAL+RPGR D +LY+GPP+   R+EI  I  RK   + +V +  L
Sbjct: 600  SVLVIAATNKPEVIDPALMRPGRLDNILYIGPPDYEARKEILDIWFRKSVINPEVEVDVL 659

Query: 973  ACLSEGCTGADISLICR---EAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            A  ++G +GA+I  IC    +AA+ A EE   A  I  +H + A++ V+
Sbjct: 660  AMKTDGYSGAEIVSICETAGDAALDAEEETGQAQDIRWEHFEYALKQVK 708



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 121/223 (54%), Gaps = 20/223 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L L   KGVLL+GPPG  KT   +  A ++G+N   V G E++S   GESE+AL E+
Sbjct: 491 MRRLNLTSKKGVLLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGESERALREI 550

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A  + P+++F DE+DAIA  R    +     ++ TLLN MDG+     VLVIAATN+
Sbjct: 551 FRKARSARPSIIFFDEIDAIASKRGTSSQG-GVNVLTTLLNEMDGIEELKSVLVIAATNK 609

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P+ I+PAL RPGRLD           ++L   P   P    R EIL         S+++ 
Sbjct: 610 PEVIDPALMRPGRLD-----------NILYIGP---PDYEARKEILDIWF---RKSVINP 652

Query: 616 EVE--YLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDV 656
           EVE   L+M T G+ GA++ ++C  A    L    +   + D+
Sbjct: 653 EVEVDVLAMKTDGYSGAEIVSICETAGDAALDAEEETGQAQDI 695



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 42/192 (21%)

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
           ++G+LL+GP GT                           +N G++E  L  VF  A +  
Sbjct: 241 SRGILLYGPKGTA------------------------FGRNIGDAESKLRNVFQEAMRCQ 276

Query: 504 PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPAL 563
           P+ + ID+++ IAP R       SQ + + L   +D   +   +L++AAT  P+ ++ AL
Sbjct: 277 PSAILIDQVEFIAPRRTSLD---SQSLASVLCECIDAT-KNAFILIVAATRHPNDVDDAL 332

Query: 564 RRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA 623
           R P RL  EIE+               +P+   R +IL A+  G   +L D+ ++ ++  
Sbjct: 333 RTPHRLATEIELH--------------IPTAHDRAQILRAICGGPSPALSDTLIDMIAEK 378

Query: 624 THGFVGADLAAL 635
           THG+VGADL AL
Sbjct: 379 THGYVGADLFAL 390



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 35/186 (18%)

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           GIL++GP G +                        F + +G++E  +R++F +A    PS
Sbjct: 243 GILLYGPKGTA------------------------FGRNIGDAESKLRNVFQEAMRCQPS 278

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            I  D+++ +A  R       S+  + ++ +L E     +   + ++AAT  P+ +D AL
Sbjct: 279 AILIDQVEFIAPRR------TSLDSQSLASVLCECIDATKNAFILIVAATRHPNDVDDAL 332

Query: 931 LRPGRFDRLLYVGPPNETDREEIFR-IHLRKIPCSSDVNIRELACLSEGCTGAD----IS 985
             P R    + +  P   DR +I R I     P  SD  I  +A  + G  GAD    + 
Sbjct: 333 RTPHRLATEIELHIPTAHDRAQILRAICGGPSPALSDTLIDMIAEKTHGYVGADLFALLQ 392

Query: 986 LICREA 991
           LI R+A
Sbjct: 393 LISRKA 398


>gi|424813637|ref|ZP_18238825.1| AAA family ATPase, CDC48 subfamily [Candidatus Nanosalina sp.
            J07AB43]
 gi|339758583|gb|EGQ43838.1| AAA family ATPase, CDC48 subfamily [Candidatus Nanosalina sp.
            J07AB43]
          Length = 759

 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 134/291 (46%), Positives = 189/291 (64%), Gaps = 4/291 (1%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            V PS MREV++EVP+V W D+GG  E K  L E VEWPQ++ + F+ +G   P GIL++G
Sbjct: 466  VEPSQMREVMVEVPQVTWNDIGGLEETKDHLQEMVEWPQEYPDEFENMGIEVPKGILLYG 525

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
             PG  KTL+A+AVA+E+  NF++V GPEL SK+VGESE AVR +F KAR  AP ++F DE
Sbjct: 526  LPGTGKTLLAKAVANESNSNFISVNGPELLSKYVGESESAVREVFKKARQVAPCVLFIDE 585

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  RG  S    V DRV++QLL ELDG+     VTVIAATNRPD IDPA++RPGR 
Sbjct: 586  IDSIAPRRGSRSSDSGVGDRVVNQLLTELDGIESLEGVTVIAATNRPDMIDPAIMRPGRV 645

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + V  P+   R++I  +H R +P + DV++ +LA  +E   G+DI  +CREA ++A+
Sbjct: 646  DRNVEVEVPDTEGRKKILEVHTRDMPLAEDVDLDKLAEETESYVGSDIESVCREAGMNAL 705

Query: 997  EENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHSNAEAD 1043
              + DA  +T    + A+  V+P+     +  Y+ +  K + +  +    D
Sbjct: 706  RNDRDAHEVTSSDFEAALEDVRPTATEDNLQRYENMMQKMEDIEQTEDTPD 756



 Score =  235 bits (600), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 114/232 (49%), Positives = 157/232 (67%), Gaps = 2/232 (0%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP V +ED+GG  E   ++ E +E P KH E F+++G   P+G+L+ GPPG  KTL+A+A
Sbjct: 206  VPDVTYEDIGGLDEEVQKVREMIELPLKHPEVFQQLGIDAPSGVLLQGPPGTGKTLLAKA 265

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA+E+   FL++ GPE+ SK+ GESEK +R  F +AR  AP+IIF DEID +A  R  + 
Sbjct: 266  VANESNATFLSIDGPEIMSKYYGESEKQLREKFEEAREEAPAIIFVDEIDAIAPKR--DE 323

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  V  RV++QLL E+DGL  R NV VIAATNR D IDPAL R GRFDR + +G PN  
Sbjct: 324  SGGEVERRVVAQLLSEMDGLEARENVIVIAATNRADSIDPALRRGGRFDREIEIGVPNRD 383

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             R+E+ +IH R +P + DV++ ELA  + G  GAD+  +C+EAA+  + + L
Sbjct: 384  GRKEVLQIHTRNMPLAEDVDLNELADKTHGYVGADLEAMCKEAAMYVLRDIL 435



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 147/234 (62%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+    GVLL GPPGTGKT LA+  A++S   
Sbjct: 214 IGGLDEEVQKVREMIELPLKHPEVFQQLGIDAPSGVLLQGPPGTGKTLLAKAVANESNAT 273

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE+ L E F+ A + APA++F+DE+DAIAP R + G E+ +R+V
Sbjct: 274 FLSIDGPEIMSKYYGESEKQLREKFEEAREEAPAIIFVDEIDAIAPKRDESGGEVERRVV 333

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+ MDG+   + V+VIAATNR DSI+PALRR GR DREIEI               V
Sbjct: 334 AQLLSEMDGLEARENVIVIAATNRADSIDPALRRGGRFDREIEI--------------GV 379

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P+   R E+L      M  +  D ++  L+  THG+VGADL A+C EAA+  LR
Sbjct: 380 PNRDGRKEVLQIHTRNMPLA-EDVDLNELADKTHGYVGADLEAMCKEAAMYVLR 432



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/252 (39%), Positives = 147/252 (58%), Gaps = 24/252 (9%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           + +GGL +    L++++           ++G+   KG+LL+G PGTGKT LA+  A++S 
Sbjct: 484 NDIGGLEETKDHLQEMVEWPQEYPDEFENMGIEVPKGILLYGLPGTGKTLLAKAVANESN 543

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR----KDGGEE 525
            N  +VNGPE++S+  GESE A+ EVF  A Q AP V+FIDE+D+IAP R     D G  
Sbjct: 544 SNFISVNGPELLSKYVGESESAVREVFKKARQVAPCVLFIDEIDSIAPRRGSRSSDSG-- 601

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           +  R+V  LL  +DG+   +GV VIAATNRPD I+PA+ RPGR+DR +E++         
Sbjct: 602 VGDRVVNQLLTELDGIESLEGVTVIAATNRPDMIDPAIMRPGRVDRNVEVE--------- 652

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
                VP    R +IL      M  +  D +++ L+  T  +VG+D+ ++C EA +  LR
Sbjct: 653 -----VPDTEGRKKILEVHTRDMPLA-EDVDLDKLAEETESYVGSDIESVCREAGMNALR 706

Query: 646 --RYSKIQTSSD 655
             R +   TSSD
Sbjct: 707 NDRDAHEVTSSD 718


>gi|226504612|ref|NP_001142062.1| uncharacterized protein LOC100274218 [Zea mays]
 gi|194706964|gb|ACF87566.1| unknown [Zea mays]
          Length = 359

 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 202/323 (62%), Gaps = 15/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 8    FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 67

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 68   KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 127

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 128  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 187

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 188  ALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEIC 247

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++      + +K     ++  E+    E+ A       K+ R   S ++
Sbjct: 248  QRACKYAIRENIEKDIERERRMKDNPEAMEEDEVDEIAEIKAAHFEESMKYAR--RSVSD 305

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+  GS  
Sbjct: 306  ADIRKYQAFAQTLQQSRGFGSEF 328



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 59  FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 118

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 119 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 177

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    RL+I  A L     +
Sbjct: 178 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEQSRLQIFKACLRKSPVA 223

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 224 -KDVDLNALAKYTQGFSGADITEICQRACKYAIR 256


>gi|121714247|ref|XP_001274734.1| AAA family ATPase, putative [Aspergillus clavatus NRRL 1]
 gi|119402888|gb|EAW13308.1| AAA family ATPase, putative [Aspergillus clavatus NRRL 1]
          Length = 750

 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 148/322 (45%), Positives = 202/322 (62%), Gaps = 14/322 (4%)

Query: 706  LSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREV 765
            L  S PL+  +  + D  H G  D        E    L +E  D   A  + RP+AMREV
Sbjct: 426  LVKSSPLKDLLPRMNDVKHEGHGDQ-------EVVIHLNIEERDVVSALQETRPTAMREV 478

Query: 766  ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLM 825
             LE PKV+W D+GGQ ++K +L +AV+ P K  E  KR+      GIL++GPPGCSKTL 
Sbjct: 479  FLETPKVRWTDIGGQHDIKRRLQKAVQRPLKFPERMKRLNVNSKKGILLYGPPGCSKTLT 538

Query: 826  ARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRG 885
             +A+A+EAGLNFLAVKG E+ S +VGESE+AVR +F KAR+  PSIIFFDEID +A+ R 
Sbjct: 539  VKALATEAGLNFLAVKGAEILSMYVGESERAVREIFRKARSARPSIIFFDEIDAIASRRS 598

Query: 886  KESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPP 945
              S GV+    V++ LL E+DG+ +  NV VIAATN+PD IDPAL+RPGR D +LY+GPP
Sbjct: 599  ASSGGVN----VLTTLLNEMDGIEELKNVLVIAATNKPDVIDPALMRPGRLDNILYIGPP 654

Query: 946  NETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR- 1004
            +   R+EI  I  RK     +V + ELA  +EG +GA+I  IC  A  +A++E  +  + 
Sbjct: 655  DRDARKEILGIWFRKSVVHPEVELEELAIRTEGYSGAEIVSICETAGDAALDEEEETGQD 714

Query: 1005 --ITMQHLKTAIRHVQPSEIHS 1024
              +  +H + A+  V+    H+
Sbjct: 715  QEVKWRHFEYALGQVKRQITHA 736



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 116/209 (55%), Gaps = 25/209 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L +   KG+LL+GPPG  KT   +  A ++G+N   V G E++S   GESE+A+ E+
Sbjct: 514 MKRLNVNSKKGILLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGESERAVREI 573

Query: 496 FDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A  + P+++F DE+DAIA  R    GG      ++ TLLN MDG+     VLVIAAT
Sbjct: 574 FRKARSARPSIIFFDEIDAIASRRSASSGG----VNVLTTLLNEMDGIEELKNVLVIAAT 629

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           N+PD I+PAL RPGRLD           ++L   P   P    R EIL         S++
Sbjct: 630 NKPDVIDPALMRPGRLD-----------NILYIGP---PDRDARKEILGIWF---RKSVV 672

Query: 614 DSEVEY--LSMATHGFVGADLAALCNEAA 640
             EVE   L++ T G+ GA++ ++C  A 
Sbjct: 673 HPEVELEELAIRTEGYSGAEIVSICETAG 701



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 120/232 (51%), Gaps = 27/232 (11%)

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
           ++G+LL+GP GTGKT+L            F + G  ++S+N+G+ E  + +VF  A    
Sbjct: 241 SRGILLYGPKGTGKTALLGQIETAGWRRTFGL-GSSMLSRNFGDGETKIRKVFQEAVLCQ 299

Query: 504 PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPAL 563
           P+ V ID+LD IAP R       SQ + + L   +D + +   VLV+AAT  P+ ++ AL
Sbjct: 300 PSAVIIDQLDFIAPKRASLD---SQSLSSVLCECLD-LAKNALVLVVAATRHPNDVDDAL 355

Query: 564 RRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA 623
           R P RL  EIE+               +P+   R EIL A+       L ++ ++ ++  
Sbjct: 356 RTPHRLGIEIELQ--------------IPTAHDRAEILRAICGSPPLHLNEALIDLIAEK 401

Query: 624 THGFVGADLAALCNEAALVCLR-RYSKIQTSS---DVLHSTGTLFEFEGHSD 671
           THG+VGADL AL     LVC + R  ++  SS   D+L     + + EGH D
Sbjct: 402 THGYVGADLFALLQ---LVCRKARQRQLVKSSPLKDLLPRMNDV-KHEGHGD 449



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 20/190 (10%)

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           GIL++GP G  KT +   + + AG       G  + S+  G+ E  +R +F +A    PS
Sbjct: 243 GILLYGPKGTGKTALLGQIET-AGWRRTFGLGSSMLSRNFGDGETKIRKVFQEAVLCQPS 301

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            +  D++D +A  R       S+  + +S +L E   L +   V V+AAT  P+ +D AL
Sbjct: 302 AVIIDQLDFIAPKRA------SLDSQSLSSVLCECLDLAKNALVLVVAATRHPNDVDDAL 355

Query: 931 LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRE-----LACLSEGCTGAD-- 983
             P R    + +  P   DR EI    LR I  S  +++ E     +A  + G  GAD  
Sbjct: 356 RTPHRLGIEIELQIPTAHDRAEI----LRAICGSPPLHLNEALIDLIAEKTHGYVGADLF 411

Query: 984 --ISLICREA 991
             + L+CR+A
Sbjct: 412 ALLQLVCRKA 421


>gi|170744850|ref|YP_001773505.1| ATPase AAA [Methylobacterium sp. 4-46]
 gi|168199124|gb|ACA21071.1| AAA family ATPase, CDC48 subfamily [Methylobacterium sp. 4-46]
          Length = 757

 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 136/272 (50%), Positives = 186/272 (68%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V+PSA+RE++++VP V W+DVGG  +V+T+L E VE P K+ EAF+RIG RP
Sbjct: 450  DFLNALKRVQPSALREIMIQVPNVGWDDVGGLGDVQTRLREGVELPLKNPEAFRRIGIRP 509

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G L+FGPPG  KTL+A+AVA EA  NF+A K  +L SKW GESE+ V  LFA+AR  A
Sbjct: 510  AKGFLLFGPPGTGKTLLAKAVAREASANFVATKSSDLLSKWYGESEQQVSRLFARARQVA 569

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IF DEID LA +RG      +V++RV++ +L E+DGL +   V VIAATNRP+ +DP
Sbjct: 570  PTVIFIDEIDSLAPVRGGGLGEPAVTERVVNTILAEMDGLEELQGVVVIAATNRPNLVDP 629

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+YV  P+   R  I  IH R +P + DV++ +LA  +   TGAD+  + 
Sbjct: 630  ALLRPGRFDELVYVPVPSAEGRRHILGIHTRGMPLARDVDLDDLAARTVRFTGADLEDLT 689

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            R A + A+  +L AS +T  H + A+   +PS
Sbjct: 690  RRAGLMALRADLAASEVTRAHFEAALHETRPS 721



 Score =  216 bits (550), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 115/278 (41%), Positives = 165/278 (59%), Gaps = 22/278 (7%)

Query: 766  ILEVPK------VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPG 819
            I E PK      V ++D+GG      Q+ E VE P +H E F+R+G  PP G+L++GPPG
Sbjct: 189  IYEEPKEARRADVTYDDIGGLGSTVDQVREMVELPLRHPELFQRLGIDPPKGVLLYGPPG 248

Query: 820  CSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDG 879
              KTL+ARAVA+E    F  + GPE+     GESE+ +R +F+ A+ N+P+IIF DEID 
Sbjct: 249  TGKTLLARAVANETEAQFFHIAGPEIMGSQYGESEQRLRQIFSDAQRNSPAIIFIDEIDS 308

Query: 880  LAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRL 939
            +A  R +E+ G  V  R+++QLL  +DGL  R N+ VI ATNR D ID AL RPGRFDR 
Sbjct: 309  IAPKR-EEARG-EVERRIVAQLLTLMDGLEPRQNIVVIGATNRRDAIDEALRRPGRFDRE 366

Query: 940  LYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-- 997
            + +G P+E  R E+  IH R +P    V++ E+A  + G  GAD++ + REAA+ A+   
Sbjct: 367  IVIGVPDEPGRREVLTIHTRGMPLGDTVDLDEIARTTYGFVGADLAALAREAAMDALRRV 426

Query: 998  ------------ENLDASRITMQHLKTAIRHVQPSEIH 1023
                        E L+  ++  +    A++ VQPS + 
Sbjct: 427  LPQINLKEGIPPEILETLQVCREDFLNALKRVQPSALR 464



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 17/212 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL+GPPGTGKT LAR  A+++    F + GPE++   YGESEQ L ++
Sbjct: 230 FQRLGIDPPKGVLLYGPPGTGKTLLARAVANETEAQFFHIAGPEIMGSQYGESEQRLRQI 289

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A +++PA++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     ++VI ATNR
Sbjct: 290 FSDAQRNSPAIIFIDEIDSIAPKREEARGEVERRIVAQLLTLMDGLEPRQNIVVIGATNR 349

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            D+I+ ALRRPGR DREI I               VP    R E+L     GM   L D+
Sbjct: 350 RDAIDEALRRPGRFDREIVI--------------GVPDEPGRREVLTIHTRGM--PLGDT 393

Query: 616 -EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            +++ ++  T+GFVGADLAAL  EAA+  LRR
Sbjct: 394 VDLDEIARTTYGFVGADLAALAREAAMDALRR 425



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 122/209 (58%), Gaps = 17/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+RP KG LL GPPGTGKT LA+  A ++  N       +++S+ YGESEQ +  +F  
Sbjct: 505 IGIRPAKGFLLFGPPGTGKTLLAKAVAREASANFVATKSSDLLSKWYGESEQQVSRLFAR 564

Query: 499 ASQSAPAVVFIDELDAIAPARKDG-GE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A Q AP V+FIDE+D++AP R  G GE  +++R+V T+L  MDG+    GV+VIAATNRP
Sbjct: 565 ARQVAPTVIFIDEIDSLAPVRGGGLGEPAVTERVVNTILAEMDGLEELQGVVVIAATNRP 624

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           + ++PAL RPGR D  + +               VPS   R  IL     GM  +  D +
Sbjct: 625 NLVDPALLRPGRFDELVYV--------------PVPSAEGRRHILGIHTRGMPLA-RDVD 669

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           ++ L+  T  F GADL  L   A L+ LR
Sbjct: 670 LDDLAARTVRFTGADLEDLTRRAGLMALR 698


>gi|357977666|ref|ZP_09141637.1| AAA family ATPase [Sphingomonas sp. KC8]
          Length = 772

 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 134/290 (46%), Positives = 197/290 (67%), Gaps = 4/290 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF++A  +V+PSAMREV+++ P  +WEDVGG  + + +L E VE P K+ +AF+R+G RP
Sbjct: 458  DFQEAIKRVQPSAMREVMVQKPNTRWEDVGGLDDARQRLREGVELPLKNPDAFRRVGIRP 517

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G L++GPPG  KTL+A+AVA EA  NF+A K  +L SKW GESE+ +  LFA+AR  A
Sbjct: 518  AKGFLLYGPPGTGKTLLAKAVAREAEANFIATKSSDLLSKWYGESEQQIARLFARARQVA 577

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IF DE+D L   RG       V++RV++ +L E+DGL +  +V VI ATNRP+ IDP
Sbjct: 578  PTVIFIDELDSLVPARGGGMGEPQVTERVVNTILSEMDGLDELQSVVVIGATNRPNLIDP 637

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+YV  P++  R  I  IH  ++P + DV++  LA  +E  +GAD+  + 
Sbjct: 638  ALLRPGRFDELIYVSVPDQAGRRRILDIHTTRMPLADDVDLDGLAQRTERFSGADLEDLV 697

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS---EI-HSYKELSAKFQR 1034
            R A + A+ E+LDA  +T  H + A++  +PS   EI H Y++++A+ ++
Sbjct: 698  RRAGLYALRESLDAKAVTAAHFEKALKDTRPSVTPEIEHEYEQIAARIKQ 747



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/267 (43%), Positives = 159/267 (59%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG      Q+ E VE P ++ E F+R+G  PP G+L+ GPPG  KT +ARAVA+
Sbjct: 208  VTYDDIGGLGTTIDQVREMVELPLRYPELFQRLGVDPPKGVLLHGPPGTGKTRLARAVAN 267

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F  + GPE+     GESEK +R +F +A  ++PSIIF DEID +A  RG+     
Sbjct: 268  ESDASFFLINGPEIMGSAYGESEKRLREIFEEAAKSSPSIIFIDEIDSIAPKRGQVQG-- 325

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                R+++QLL  +DGL  R N  VIAATNRP+ ID AL RPGRFDR + +G P+E  R 
Sbjct: 326  EAEKRLVAQLLTLMDGLEARQNTVVIAATNRPEAIDEALRRPGRFDREIIIGVPDERGRR 385

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI  IH R +P    V++ ELA  + G  GAD++ + REAAI A+               
Sbjct: 386  EILGIHTRGMPLGDRVDLDELARQTYGFVGADMAALAREAAIEAVRRIMPMLDLEDRTIP 445

Query: 998  -ENLDASRITMQHLKTAIRHVQPSEIH 1023
             E LD   +T +  + AI+ VQPS + 
Sbjct: 446  PEVLDTLSVTREDFQEAIKRVQPSAMR 472



 Score =  194 bits (493), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/236 (45%), Positives = 147/236 (62%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      +++++ +          LG+ P KGVLLHGPPGTGKT LAR  A++S  +
Sbjct: 213 IGGLGTTIDQVREMVELPLRYPELFQRLGVDPPKGVLLHGPPGTGKTRLARAVANESDAS 272

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++   YGESE+ L E+F+ A++S+P+++FIDE+D+IAP R     E  +R+V
Sbjct: 273 FFLINGPEIMGSAYGESEKRLREIFEEAAKSSPSIIFIDEIDSIAPKRGQVQGEAEKRLV 332

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+      +VIAATNRP++I+ ALRRPGR DREI I               V
Sbjct: 333 AQLLTLMDGLEARQNTVVIAATNRPEAIDEALRRPGRFDREIII--------------GV 378

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L D  +++ L+  T+GFVGAD+AAL  EAA+  +RR
Sbjct: 379 PDERGRREILGIHTRGM--PLGDRVDLDELARQTYGFVGADMAALAREAAIEAVRR 432



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 123/209 (58%), Gaps = 17/209 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           +G+RP KG LL+GPPGTGKT LA+  A ++  N       +++S+ YGESEQ +  +F  
Sbjct: 513 VGIRPAKGFLLYGPPGTGKTLLAKAVAREAEANFIATKSSDLLSKWYGESEQQIARLFAR 572

Query: 499 ASQSAPAVVFIDELDAIAPARKDG-GE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A Q AP V+FIDELD++ PAR  G GE ++++R+V T+L+ MDG+     V+VI ATNRP
Sbjct: 573 ARQVAPTVIFIDELDSLVPARGGGMGEPQVTERVVNTILSEMDGLDELQSVVVIGATNRP 632

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           + I+PAL RPGR D  I +              +VP  A R  IL    + M  +  D +
Sbjct: 633 NLIDPALLRPGRFDELIYV--------------SVPDQAGRRRILDIHTTRMPLA-DDVD 677

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLR 645
           ++ L+  T  F GADL  L   A L  LR
Sbjct: 678 LDGLAQRTERFSGADLEDLVRRAGLYALR 706


>gi|78186575|ref|YP_374618.1| AAA ATPase [Chlorobium luteolum DSM 273]
 gi|78166477|gb|ABB23575.1| AAA ATPase, CDC48 [Chlorobium luteolum DSM 273]
          Length = 718

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/295 (47%), Positives = 200/295 (67%), Gaps = 8/295 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++ + +F  A  +V PSA+RE  +EVP V+WEDVGG  EVK  L EAVEWP +++E F+
Sbjct: 424  LEVTMENFLDAMKEVEPSAIREFFVEVPNVRWEDVGGHEEVKQALREAVEWPVRYRELFR 483

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            + GT PP G++++G PG  KT +A+A+A+E+G+NF++VKGPE+ S+++GESEKAVR LF 
Sbjct: 484  KTGTIPPKGVILYGKPGTGKTWLAKALATESGVNFISVKGPEIISRFIGESEKAVRELFR 543

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
             A+ +AP+IIF DEID LA  RG      SV+ RV+SQ L E+DG+ +   V V+AATNR
Sbjct: 544  LAKQSAPTIIFLDEIDSLAPARGAGGSESSVTQRVISQFLTEMDGIEELKGVFVLAATNR 603

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             D +DPAL+RPGRFD L  V PP+   R  IF IH + +    DV+I  LA  +EG +GA
Sbjct: 604  IDLLDPALIRPGRFDLLYEVPPPDVLARVRIFEIHTKSMTLDDDVSISALAESTEGMSGA 663

Query: 983  DISLICREAAISAIEE--NLDASRITMQHLKTAIR--HVQPSEIHSYKELSAKFQ 1033
            DI  ICR+A++ AI     L+A  I   H++  +R  H Q     + + LS++++
Sbjct: 664  DIEFICRKASMGAISACIALEAGGIDPLHVELRVRDSHFQ----EAVRLLSSRYR 714



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/284 (41%), Positives = 165/284 (58%), Gaps = 23/284 (8%)

Query: 765  VILEVPK--------VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            + LE+PK        V +ED+GG      ++ E +E P K+ E F R+G  PP G+ ++G
Sbjct: 163  IALELPKKSEGGVNLVTYEDIGGLGTQVQRIREMIELPLKYPEIFDRLGVEPPKGVFLYG 222

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
            PPG  KTL+ RAVA E    F+ + GPE+  K+ GESE  +R++FA+A A+APSIIF DE
Sbjct: 223  PPGTGKTLIVRAVARETDAYFINISGPEIMGKFYGESEARIRNIFAEAEAHAPSIIFIDE 282

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  R        V  RV++QLL  +DGL  R  V VI ATN P+ IDPAL RPGRF
Sbjct: 283  IDAIAPRREDMGGEKQVEKRVVAQLLSLMDGLKSRGKVIVIGATNIPNAIDPALRRPGRF 342

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + V  P+   R EI  IH R IP S DV++  +A ++ G  GAD+  + REAA++A+
Sbjct: 343  DREISVSVPDRNGRLEIIHIHTRGIPLSDDVDLGRIADITHGFVGADLEALAREAAMTAL 402

Query: 997  E---------------ENLDASRITMQHLKTAIRHVQPSEIHSY 1025
                            E L    +TM++   A++ V+PS I  +
Sbjct: 403  RRILPKIDFELSEIPYELLTQLEVTMENFLDAMKEVEPSAIREF 446



 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 103/237 (43%), Positives = 146/237 (61%), Gaps = 18/237 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +          LG+ P KGV L+GPPGTGKT + R  A ++   
Sbjct: 183 IGGLGTQVQRIREMIELPLKYPEIFDRLGVEPPKGVFLYGPPGTGKTLIVRAVARETDAY 242

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD-GGE-ELSQR 529
              ++GPE++ + YGESE  +  +F  A   AP+++FIDE+DAIAP R+D GGE ++ +R
Sbjct: 243 FINISGPEIMGKFYGESEARIRNIFAEAEAHAPSIIFIDEIDAIAPRREDMGGEKQVEKR 302

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +VA LL+LMDG+     V+VI ATN P++I+PALRRPGR DREI +              
Sbjct: 303 VVAQLLSLMDGLKSRGKVIVIGATNIPNAIDPALRRPGRFDREISV-------------- 348

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +VP    RLEI+H    G+  S  D ++  ++  THGFVGADL AL  EAA+  LRR
Sbjct: 349 SVPDRNGRLEIIHIHTRGIPLS-DDVDLGRIADITHGFVGADLEALAREAAMTALRR 404



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/206 (43%), Positives = 124/206 (60%), Gaps = 21/206 (10%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G  P KGV+L+G PGTGKT LA+  A +SGVN  +V GPE++S+  GESE+A+ E+F  A
Sbjct: 486 GTIPPKGVILYGKPGTGKTWLAKALATESGVNFISVKGPEIISRFIGESEKAVRELFRLA 545

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            QSAP ++F+DE+D++APAR  GG E  ++QR+++  L  MDG+    GV V+AATNR D
Sbjct: 546 KQSAPTIIFLDEIDSLAPARGAGGSESSVTQRVISQFLTEMDGIEELKGVFVLAATNRID 605

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
            ++PAL RPGR            F LL   P   P    R+ I       M    LD +V
Sbjct: 606 LLDPALIRPGR------------FDLLYEVPP--PDVLARVRIFEIHTKSM---TLDDDV 648

Query: 618 EYLSMA--THGFVGADLAALCNEAAL 641
              ++A  T G  GAD+  +C +A++
Sbjct: 649 SISALAESTEGMSGADIEFICRKASM 674


>gi|389690987|ref|ZP_10179880.1| AAA family ATPase, CDC48 subfamily [Microvirga sp. WSM3557]
 gi|388589230|gb|EIM29519.1| AAA family ATPase, CDC48 subfamily [Microvirga sp. WSM3557]
          Length = 761

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 134/279 (48%), Positives = 188/279 (67%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L++   DF  A  +V+PSA+RE++++VP V W+D+GG  E +T+L E VE P K  E+F
Sbjct: 447  SLQVTRQDFMNAMKRVQPSALREIMIQVPNVTWDDIGGVEEARTRLREGVELPLKSPESF 506

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +R+G RP  G L+FGPPG  KTL+A+AVA EA  NF+A K  +L SKW GESE+ V  LF
Sbjct: 507  RRLGIRPAKGFLLFGPPGTGKTLLAKAVAREAQANFVATKSSDLLSKWYGESEQQVSRLF 566

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            A+AR  AP++IF DEID LA +RG      +V++RV++ +L E+DGL +   V V+AATN
Sbjct: 567  ARARQVAPTVIFIDEIDSLAPVRGGGLGEPAVTERVVNTILAEMDGLEELQGVVVMAATN 626

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RP+ IDPALLRPGRFD L+YV  P+   R  I  IH + +P   DV++  +A  +   TG
Sbjct: 627  RPNLIDPALLRPGRFDELIYVPVPDAQGRRHILGIHTKAMPLGPDVDLDAIAERTSRFTG 686

Query: 982  ADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            AD+  + R A + A+ E+L A  +TM H + A+R  +PS
Sbjct: 687  ADLEDLTRRAGLLALRESLQAEHVTMAHFEQALRETRPS 725



 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 161/266 (60%), Gaps = 16/266 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG      Q+ E VE P +H E F+R+G  PP G+L++GPPG  KT +ARAVA+
Sbjct: 205  VTYDDIGGLGSTVDQVREMVELPLRHPELFQRLGIDPPKGVLLYGPPGTGKTRLARAVAN 264

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E    F  + GPE+     GESE+ +R +F +A+ NAP+IIF DEID +A  R +E  G 
Sbjct: 265  ETEAQFFHIAGPEIMGSHYGESEQRLRQVFQEAQQNAPAIIFIDEIDSIAPKR-EEVTG- 322

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R+++QLL  +DGL  R N+ VI ATNR + ID AL RPGRFDR + +G P+E  R 
Sbjct: 323  EVERRIVAQLLTLMDGLEPRQNIVVIGATNRREAIDEALRRPGRFDREIVIGVPDELGRR 382

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE------------- 998
            EI  IH R +P   DV++ ++A  + G  GAD++ + REAA+ ++               
Sbjct: 383  EILGIHTRGMPLGEDVDLEDIARTTYGFVGADLAALAREAAMDSLRRILPGINLKDGIPS 442

Query: 999  -NLDASRITMQHLKTAIRHVQPSEIH 1023
              L++ ++T Q    A++ VQPS + 
Sbjct: 443  NVLESLQVTRQDFMNAMKRVQPSALR 468



 Score =  192 bits (488), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 103/211 (48%), Positives = 135/211 (63%), Gaps = 15/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              LG+ P KGVLL+GPPGTGKT LAR  A+++    F + GPE++  +YGESEQ L +V
Sbjct: 234 FQRLGIDPPKGVLLYGPPGTGKTRLARAVANETEAQFFHIAGPEIMGSHYGESEQRLRQV 293

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A Q+APA++FIDE+D+IAP R++   E+ +R+VA LL LMDG+     ++VI ATNR
Sbjct: 294 FQEAQQNAPAIIFIDEIDSIAPKREEVTGEVERRIVAQLLTLMDGLEPRQNIVVIGATNR 353

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
            ++I+ ALRRPGR DREI I               VP    R EIL     GM     D 
Sbjct: 354 REAIDEALRRPGRFDREIVI--------------GVPDELGRREILGIHTRGMPLG-EDV 398

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++E ++  T+GFVGADLAAL  EAA+  LRR
Sbjct: 399 DLEDIARTTYGFVGADLAALAREAAMDSLRR 429



 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 120/213 (56%), Gaps = 17/213 (7%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           +   LG+RP KG LL GPPGTGKT LA+  A ++  N       +++S+ YGESEQ +  
Sbjct: 505 SFRRLGIRPAKGFLLFGPPGTGKTLLAKAVAREAQANFVATKSSDLLSKWYGESEQQVSR 564

Query: 495 VFDSASQSAPAVVFIDELDAIAPARKDG-GE-ELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           +F  A Q AP V+FIDE+D++AP R  G GE  +++R+V T+L  MDG+    GV+V+AA
Sbjct: 565 LFARARQVAPTVIFIDEIDSLAPVRGGGLGEPAVTERVVNTILAEMDGLEELQGVVVMAA 624

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRP+ I+PAL RPGR D  I +               VP    R  IL      M    
Sbjct: 625 TNRPNLIDPALLRPGRFDELIYV--------------PVPDAQGRRHILGIHTKAMPLG- 669

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D +++ ++  T  F GADL  L   A L+ LR
Sbjct: 670 PDVDLDAIAERTSRFTGADLEDLTRRAGLLALR 702


>gi|448622941|ref|ZP_21669590.1| cell division control protein 48 [Haloferax denitrificans ATCC 35960]
 gi|445753449|gb|EMA04866.1| cell division control protein 48 [Haloferax denitrificans ATCC 35960]
          Length = 754

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 136/291 (46%), Positives = 192/291 (65%), Gaps = 12/291 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
             LK+   DF++A   + PSA+REV +EVP V WEDVGG    K +L E ++WP ++ E F
Sbjct: 430  GLKVTEDDFKQALKSIEPSALREVFVEVPDVTWEDVGGLEPTKERLRETIQWPLEYPEVF 489

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            +++      G+LM+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 490  QQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 549

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR NAP+++FFDEID +A  RG++S    V++RV+SQLL ELDGL    +V VIA TN
Sbjct: 550  KKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIATTN 609

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  R  I  +H R  P + DV++  +A  ++G  G
Sbjct: 610  RPDLIDSALLRPGRLDRHVHVPVPDEEARRAILDVHTRNKPLADDVDLDRIASKTDGYVG 669

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS 1020
            AD+  + REA+++A            I E++   R+TM H + A+  +  S
Sbjct: 670  ADLEALAREASMNASREFIRSVAKEEIGESVGNVRVTMDHFEDALDEIGAS 720



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 164/266 (61%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E FKR+G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 185  PSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAV 244

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  R +   
Sbjct: 245  ANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEA-- 302

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R  V VI ATNR D ID AL R GRFDR + +G P+   
Sbjct: 303  GGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEIGVPDRDG 362

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE----------EN 999
            R+EI ++H R +P + D+N+ E A  + G  GAD+  + +E+A+ A+           E 
Sbjct: 363  RKEILQVHTRNMPLTDDINLDEYADSTHGFVGADLESLAKESAMHALRRIRPQLDLDAEE 422

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T    K A++ ++PS
Sbjct: 423  IDAEVLEGLKVTEDDFKQALKSIEPS 448



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/235 (44%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 192 IGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAS 251

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+F+ A++++PA+VFIDE+D+IAP R + G ++ +R+V
Sbjct: 252 FHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRSEAGGDVERRVV 311

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+I+ ALRR GR DREIEI               V
Sbjct: 312 AQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEI--------------GV 357

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL      M  +  D  ++  + +THGFVGADL +L  E+A+  LRR
Sbjct: 358 PDRDGRKEILQVHTRNMPLT-DDINLDEYADSTHGFVGADLESLAKESAMHALRR 411



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 135/246 (54%), Gaps = 23/246 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
               + +   KGVL++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 488 VFQQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 547

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP VVF DE+D+IA    R      +++R+V+ LL  +DG+   + V+VIA 
Sbjct: 548 VFKKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALEDVVVIAT 607

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLDR + +               VP    R  IL   +      L
Sbjct: 608 TNRPDLIDSALLRPGRLDRHVHV--------------PVPDEEARRAILD--VHTRNKPL 651

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTG----TLFEFE 667
            D  +++ ++  T G+VGADL AL  EA++   R + +     ++  S G    T+  FE
Sbjct: 652 ADDVDLDRIASKTDGYVGADLEALAREASMNASREFIRSVAKEEIGESVGNVRVTMDHFE 711

Query: 668 GHSDTM 673
              D +
Sbjct: 712 DALDEI 717


>gi|239819394|gb|ACS28251.1| cell division control protein [Nicotiana glutinosa]
          Length = 805

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 138/313 (44%), Positives = 194/313 (61%), Gaps = 28/313 (8%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLDA-----------------------SRITMQH----LKTAIRHVQPSE 1021
            + A   AI EN++                        + IT  H    +K A R V  ++
Sbjct: 696  QRACKYAIRENIEKDIEKERKRSENPDSMDEDADDEIAEITPSHFEESMKYARRSVSDAD 755

Query: 1022 IHSYKELSAKFQR 1034
            I  Y+  +   Q+
Sbjct: 756  IRKYQAFAQTLQQ 768



 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 116/268 (43%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + +V++  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVTNEHFQTALGTSNPSALR 469



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 103/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  + ++E +S  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EEVDLERISKDTHGYVGADLAALCTEAALQCIR 428



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDEDSRHQIFKACLRKSPLS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|255556934|ref|XP_002519500.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
            communis]
 gi|223541363|gb|EEF42914.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
            communis]
          Length = 806

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 138/313 (44%), Positives = 192/313 (61%), Gaps = 28/313 (8%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENL-----------------------DASRITMQH----LKTAIRHVQPSE 1021
            + A   AI EN+                       D + I   H    +K A R V  ++
Sbjct: 696  QRACKYAIRENIEKDIERERRRRDNPEAMEEDVEDDVAEIKAAHFEESMKYARRSVSDAD 755

Query: 1022 IHSYKELSAKFQR 1034
            I  Y+  +   Q+
Sbjct: 756  IRKYQAFAQTLQQ 768



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/268 (43%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  ++ +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVSNEHFQTALGTSNPSALR 469



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E +S  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EDVDLERISKDTHGYVGADLAALCTEAALQCIR 428



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPVS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|448410103|ref|ZP_21575052.1| cell division control protein 48/AAA family ATPase [Halosimplex
            carlsbadense 2-9-1]
 gi|445672383|gb|ELZ24959.1| cell division control protein 48/AAA family ATPase [Halosimplex
            carlsbadense 2-9-1]
          Length = 756

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 136/300 (45%), Positives = 193/300 (64%), Gaps = 16/300 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D ++A   + PSA+REV +EVP V W+ VGG  + K +L E ++WP  + E F+ +  + 
Sbjct: 440  DLKQALKGIEPSALREVFVEVPDVTWDQVGGLEDTKERLRETIQWPLDYPEVFEAMDMQA 499

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+LM+GPPG  KTL+A+A+A+EA  NF+++KGPEL +K+VGESEK VR +F KARANA
Sbjct: 500  AKGVLMYGPPGTGKTLLAKAIANEAQSNFISIKGPELLNKFVGESEKGVREVFEKARANA 559

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  RG  +    V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 560  PTVVFFDEIDSIAGERGGNTTDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 619

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R +IF +H R  P +  V++ +LA  ++G  GADI  + 
Sbjct: 620  ALLRPGRLDRHVHVPVPDEEGRRKIFEVHTRDKPLAEGVDLDDLAARTDGYVGADIEAVT 679

Query: 989  REAAISAIEENLDA------------SRITMQHLKTAIRHVQPS----EIHSYKELSAKF 1032
            REA+++A  E L +             ++TM H + A+  V PS        Y E+  +F
Sbjct: 680  REASMAATREFLASVDPEDIGDSVGNVKVTMDHFEHALDEVGPSVDEETREQYDEIEDRF 739



 Score =  213 bits (542), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 109/266 (40%), Positives = 168/266 (63%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P + +ED+GG  +   Q+ E +E P +H E F+ +G  PP G+L+ GPPG  KTLMA+AV
Sbjct: 188  PDITYEDIGGLDDELEQVREMIELPMRHPELFETLGIEPPKGVLLHGPPGTGKTLMAKAV 247

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F  + GPE+ SK+ GESE+ +R +F +A  N+P+I+F DEID +A  RG E+ 
Sbjct: 248  ANEIDAYFTDISGPEIMSKYYGESEEQLREIFDEAEENSPAIVFIDEIDSIAPKRG-ETQ 306

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL  R  V VI ATNR D +DPAL R GRFDR + +G P++  
Sbjct: 307  G-DVERRVVAQLLSLMDGLESRGQVIVIGATNRVDAVDPALRRGGRFDREIEIGVPDKNG 365

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDASR 1004
            R+EI ++H R +P +  +++ + A  + G  GAD+  + +E+A++A+     E +L++  
Sbjct: 366  RKEILQVHTRGMPLAEGIDLDQYAENTHGFVGADLESLTKESAMNALRRIRPELDLESDE 425

Query: 1005 I---TMQH-------LKTAIRHVQPS 1020
            I    ++H       LK A++ ++PS
Sbjct: 426  IDAEVLEHLEVSENDLKQALKGIEPS 451



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/238 (44%), Positives = 146/238 (61%), Gaps = 22/238 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +         +LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 195 IGGLDDELEQVREMIELPMRHPELFETLGIEPPKGVLLHGPPGTGKTLMAKAVANEIDAY 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              ++GPE++S+ YGESE+ L E+FD A +++PA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FTDISGPEIMSKYYGESEEQLREIFDEAEENSPAIVFIDEIDSIAPKRGETQGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+++PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLESRGQVIVIGATNRVDAVDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   E   LD   E     THGFVGADL +L  E+A+  LRR
Sbjct: 361 PDKNGRKEILQVHTRGMPLAEGIDLDQYAEN----THGFVGADLESLTKESAMNALRR 414



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 153/288 (53%), Gaps = 26/288 (9%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            ++GGL      L++ I           ++ ++  KGVL++GPPGTGKT LA+  A+++ 
Sbjct: 466 DQVGGLEDTKERLRETIQWPLDYPEVFEAMDMQAAKGVLMYGPPGTGKTLLAKAIANEAQ 525

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR----KDGGEE 525
            N  ++ GPE++++  GESE+ + EVF+ A  +AP VVF DE+D+IA  R     D G  
Sbjct: 526 SNFISIKGPELLNKFVGESEKGVREVFEKARANAPTVVFFDEIDSIAGERGGNTTDSG-- 583

Query: 526 LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLK 585
           + +R+V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +          
Sbjct: 584 VGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV---------- 633

Query: 586 NSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCL 644
                VP    R +I    +   +  L +  +++ L+  T G+VGAD+ A+  EA++   
Sbjct: 634 ----PVPDEEGRRKIFE--VHTRDKPLAEGVDLDDLAARTDGYVGADIEAVTREASMAAT 687

Query: 645 RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLD 692
           R +       D+  S G +     H +  L   +   ++ E +R+  D
Sbjct: 688 REFLASVDPEDIGDSVGNVKVTMDHFEHAL--DEVGPSVDEETREQYD 733


>gi|409046191|gb|EKM55671.1| hypothetical protein PHACADRAFT_93933, partial [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 586

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 130/290 (44%), Positives = 201/290 (69%), Gaps = 8/290 (2%)

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
            K+   D   A + VRPSA+R V L+  +V++ D+GGQ     +L E VEWP KH EAF+R
Sbjct: 294  KVTFDDLAGALLSVRPSALRSVFLDTARVRYSDIGGQATTIQKLRECVEWPVKHPEAFER 353

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
            +G + P G+L++GPPGCSKT++ RA+A+E+G+NF+AVKGPEL +K++GESE+AVR +F K
Sbjct: 354  LGVKAPKGVLLYGPPGCSKTMLVRALATESGVNFVAVKGPELLNKYLGESERAVREIFRK 413

Query: 864  ARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            ARA APSIIFFDE+D L + R G +S+     + V++ LL E+DG+ + V VTV+AATNR
Sbjct: 414  ARAAAPSIIFFDEVDALGSSRTGSDSNA---HEGVLTSLLNEIDGVEELVGVTVVAATNR 470

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            PD +D AL+RPGR DR ++VGPP+   R EI RI  +K+    ++++ +++ +++G +GA
Sbjct: 471  PDVLDSALMRPGRLDRQIFVGPPDFQGRVEILRIRTQKMSVEPELDVGQISRMTDGYSGA 530

Query: 983  DISLICREAAISAIEENLDASRIT----MQHLKTAIRHVQPSEIHSYKEL 1028
            +++ +C+EAA+  + EN  A  +     ++  K   + + P  +  Y++ 
Sbjct: 531  ELAALCQEAAMLTMRENFQAQFVPQSAFIEAAKVVKKQITPEVLRRYRQF 580



 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/265 (39%), Positives = 163/265 (61%), Gaps = 19/265 (7%)

Query: 393 PNAQI-EFQNVQATVEQD-ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLL 449
           P+ +I + + +++T+  +  S +GG+ K+ A ++D+I I  +        GL+P +G+LL
Sbjct: 24  PDDKIADMRGIESTLPANAYSAVGGVDKQIAQIRDLIEIPLTHPELFRHFGLKPPRGILL 83

Query: 450 HGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFI 509
           HGPPGTGKT LAR  A  +  ++  +NGPE+ S  +GE+E  + +VF  A   +P +V +
Sbjct: 84  HGPPGTGKTHLARAIAASTNSSVIIINGPELSSAYHGETESKIRDVFAQARAKSPCIVVL 143

Query: 510 DELDAIAPARKDG-GEELSQRMVATLLNLMDGV------CRTDGVLVIAATNRPDSIEPA 562
           DE+DA+ P R++G G E+ +R+VA LL +MDG+       + + V+V+A TNRP++I+PA
Sbjct: 144 DEVDALCPRREEGPGGEVEKRVVAQLLTIMDGIEEIGKDGKEEQVVVVATTNRPNAIDPA 203

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM 622
           LRRPGR DREIEI  + LFS        VP    R  I   LL    H+L   E+  ++ 
Sbjct: 204 LRRPGRFDREIEI--ANLFS-------GVPDADARASIFDVLLVKTPHTLTRDEIRTVAS 254

Query: 623 ATHGFVGADLAALCNEAALVCLRRY 647
             HG+VGADL+A+  EA    ++R+
Sbjct: 255 RAHGYVGADLSAVVREAGTSTIKRW 279



 Score =  181 bits (458), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 156/285 (54%), Gaps = 23/285 (8%)

Query: 762  MREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCS 821
            MR +   +P   +  VGG  +   Q+ + +E P  H E F+  G +PP GIL+ GPPG  
Sbjct: 31   MRGIESTLPANAYSAVGGVDKQIAQIRDLIEIPLTHPELFRHFGLKPPRGILLHGPPGTG 90

Query: 822  KTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA 881
            KT +ARA+A+    + + + GPEL S + GE+E  +R +FA+ARA +P I+  DE+D L 
Sbjct: 91   KTHLARAIAASTNSSVIIINGPELSSAYHGETESKIRDVFAQARAKSPCIVVLDEVDALC 150

Query: 882  AIRGKESDGVSVSDRVMSQLLVELDGLHQ------RVNVTVIAATNRPDKIDPALLRPGR 935
              R +E  G  V  RV++QLL  +DG+ +         V V+A TNRP+ IDPAL RPGR
Sbjct: 151  P-RREEGPGGEVEKRVVAQLLTIMDGIEEIGKDGKEEQVVVVATTNRPNAIDPALRRPGR 209

Query: 936  FDRL-----LYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICR 989
            FDR      L+ G P+   R  IF + L K P + +   IR +A  + G  GAD+S + R
Sbjct: 210  FDREIEIANLFSGVPDADARASIFDVLLVKTPHTLTRDEIRTVASRAHGYVGADLSAVVR 269

Query: 990  EAAISAIEENL----------DASRITMQHLKTAIRHVQPSEIHS 1024
            EA  S I+  L            +++T   L  A+  V+PS + S
Sbjct: 270  EAGTSTIKRWLASHSSDPSSISEAKVTFDDLAGALLSVRPSALRS 314



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 127/215 (59%), Gaps = 19/215 (8%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++  KGVLL+GPPG  KT L R  A +SGVN   V GPE++++  GESE+A+ E+F  
Sbjct: 354 LGVKAPKGVLLYGPPGCSKTMLVRALATESGVNFVAVKGPELLNKYLGESERAVREIFRK 413

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A  +AP+++F DE+DA+  +R        + ++ +LLN +DGV    GV V+AATNRPD 
Sbjct: 414 ARAAAPSIIFFDEVDALGSSRTGSDSNAHEGVLTSLLNEIDGVEELVGVTVVAATNRPDV 473

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM--EHSLLDSE 616
           ++ AL RPGRLDR+I +                P    R+EIL      M  E  L   +
Sbjct: 474 LDSALMRPGRLDRQIFV--------------GPPDFQGRVEILRIRTQKMSVEPEL---D 516

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           V  +S  T G+ GA+LAALC EAA++ +R   + Q
Sbjct: 517 VGQISRMTDGYSGAELAALCQEAAMLTMRENFQAQ 551


>gi|255556938|ref|XP_002519502.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
            communis]
 gi|223541365|gb|EEF42916.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
            communis]
          Length = 805

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 138/313 (44%), Positives = 192/313 (61%), Gaps = 28/313 (8%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENL-----------------------DASRITMQH----LKTAIRHVQPSE 1021
            + A   AI EN+                       D + I   H    +K A R V  ++
Sbjct: 696  QRACKYAIRENIEKDIERERRQRDNPEAMEEDVEDDVAEIKAAHFEESMKYARRSVSDAD 755

Query: 1022 IHSYKELSAKFQR 1034
            I  Y+  +   Q+
Sbjct: 756  IRKYQAFAQTLQQ 768



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/268 (43%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  ++ +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVSNEHFQTALGTSNPSALR 469



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E +S  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EDVDLERISKDTHGYVGADLAALCTEAALQCIR 428



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPVS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|414871290|tpg|DAA49847.1| TPA: hypothetical protein ZEAMMB73_992208 [Zea mays]
          Length = 810

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 202/323 (62%), Gaps = 15/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 459  FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 518

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 519  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 578

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 579  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 638

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 639  ALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEIC 698

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++      + +K     ++  E+    E+ A       K+ R   S ++
Sbjct: 699  QRACKYAIRENIEKDIERERRMKDNPEAMEEDEVDEIAEIKAAHFEESMKYAR--RSVSD 756

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+  GS  
Sbjct: 757  ADIRKYQAFAQTLQQSRGFGSEF 779



 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 207  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 266

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G
Sbjct: 267  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG 325

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 326  -EVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 384

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DVN+  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 385  LEVLRIHTKNMKLAEDVNLELISKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETI 444

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H KTA+    PS + 
Sbjct: 445  DAEILNSMAVTNDHFKTALGTSNPSALR 472



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 155/239 (64%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 213 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 272

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 273 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 332

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 333 SQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 378

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  D  +E +S  THG+VGADLAALC EAAL C+R    I
Sbjct: 379 PDEVGRLEVLRIHTKNMKLA-EDVNLELISKDTHGYVGADLAALCTEAALQCIREKMDI 436



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 510 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 569

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 570 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 628

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    RL+I  A L     +
Sbjct: 629 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEQSRLQIFKACLRKSPVA 674

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 675 -KDVDLNALAKYTQGFSGADITEICQRACKYAIR 707


>gi|356533213|ref|XP_003535161.1| PREDICTED: cell division cycle protein 48 homolog [Glycine max]
          Length = 813

 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 458  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 517

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 518  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARGSAP 577

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 578  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 637

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 638  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 697

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 698  QRACKYAIRENIE 710



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 206  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 265

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 266  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 324

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 325  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 383

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 384  LEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 443

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 444  DAEILNSMAVTNEHFQTALGTSNPSALR 471



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 212 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 271

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 272 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 331

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 332 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 377

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 378 PDEVGRLEVLRIHTKNMKLA-EDVDLERIAKDTHGYVGADLAALCTEAALQCIR 430



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 116/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 509 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 568

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A  SAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 569 FDKARGSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 627

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 628 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPVS 673

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 674 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 706


>gi|389743136|gb|EIM84321.1| AAA family ATPase [Stereum hirsutum FP-91666 SS1]
          Length = 806

 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 134/286 (46%), Positives = 194/286 (67%), Gaps = 4/286 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D + +   +RPSA+R   L++  V++ ++GG      +L E+VEWP  H     R+G   
Sbjct: 515  DLDASLPTIRPSALRAHFLDMAPVRFSEIGGLSSTIARLRESVEWPLIHGATLARLGVTA 574

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L+ GPPGCSKT++ARA A+E+G+NF+AV+GPEL +K+VGESEKAVR +F KARA A
Sbjct: 575  PKGVLLCGPPGCSKTVLARATATESGVNFVAVRGPELLNKYVGESEKAVREIFRKARAAA 634

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSIIFFDEID LA  R          + V++ LL E+DG+ + V VTV+ ATNRP+ IDP
Sbjct: 635  PSIIFFDEIDALAISR-SSGSEGGSHEGVLTSLLNEMDGVEELVGVTVVGATNRPEVIDP 693

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            AL+RPGR DR+LYVGPP+   R EI +I +RK+    DV+  ELA L++GC+GA+I+ +C
Sbjct: 694  ALMRPGRLDRILYVGPPDHAGRIEILKIRMRKMSVDPDVDFEELATLTDGCSGAEITSMC 753

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            +EAA+  ++++L+A+ +       A R+++        E+  +FQR
Sbjct: 754  QEAALLTMQKDLEAAYVPHSAFVAASRNIKK---QITPEMLQRFQR 796



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/283 (40%), Positives = 167/283 (59%), Gaps = 28/283 (9%)

Query: 378 PPLNAVS---------KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII- 427
           PPL+ VS          + +   L   +IE     A+ +  +S +GGL K+ A ++D+I 
Sbjct: 227 PPLSTVSWQTTVTLQDTAKQTKLLEKKEIEILGPSASPQAYVS-VGGLDKQIAQIRDLIE 285

Query: 428 ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGE 487
           I  +        GL+P +G+LLHGPPGTGKT LAR  A  +  ++  VNGPE+ S  +GE
Sbjct: 286 IPLTRPDLFRHFGLKPPRGLLLHGPPGTGKTHLARAIAASTQSSVLIVNGPELTSAYHGE 345

Query: 488 SEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-GEELSQRMVATLLNLMDGV--CRT 544
           +E +L +VF  A   AP ++ +DE+DAI P R++G G E+ +R+VATLL  MDGV     
Sbjct: 346 TEASLRKVFADARAKAPCIIVLDEVDAICPRREEGAGGEVEKRVVATLLTEMDGVEGDVD 405

Query: 545 DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL 604
             V+V+A TNRP++I+PALRRPGR DREIEI               +P    R+ I++ L
Sbjct: 406 ARVVVVATTNRPNAIDPALRRPGRFDREIEI--------------GIPDLEARISIMNVL 451

Query: 605 LSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           LS   H++   E+  ++   HG+VGADLAA+  EA  + ++RY
Sbjct: 452 LSKTPHTVSPEELRAVASRAHGYVGADLAAVVREAGTLAIKRY 494



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 135/230 (58%), Gaps = 4/230 (1%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +   Q+ + +E P    + F+  G +PP G+L+ GPPG  KT +ARA+A+  
Sbjct: 267  YVSVGGLDKQIAQIRDLIEIPLTRPDLFRHFGLKPPRGLLLHGPPGTGKTHLARAIAAST 326

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              + L V GPEL S + GE+E ++R +FA ARA AP II  DE+D +   R +E  G  V
Sbjct: 327  QSSVLIVNGPELTSAYHGETEASLRKVFADARAKAPCIIVLDEVDAICP-RREEGAGGEV 385

Query: 894  SDRVMSQLLVELDGLH--QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
              RV++ LL E+DG+       V V+A TNRP+ IDPAL RPGRFDR + +G P+   R 
Sbjct: 386  EKRVVATLLTEMDGVEGDVDARVVVVATTNRPNAIDPALRRPGRFDREIEIGIPDLEARI 445

Query: 952  EIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             I  + L K P + S   +R +A  + G  GAD++ + REA   AI+  +
Sbjct: 446  SIMNVLLSKTPHTVSPEELRAVASRAHGYVGADLAAVVREAGTLAIKRYI 495



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 146/240 (60%), Gaps = 21/240 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S++GGLS   A L++ +    +  +TL+ LG+   KGVLL GPPG  KT LAR  A +SG
Sbjct: 541 SEIGGLSSTIARLRESVEWPLIHGATLARLGVTAPKGVLLCGPPGCSKTVLARATATESG 600

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           VN   V GPE++++  GESE+A+ E+F  A  +AP+++F DE+DA+A +R  G E  S  
Sbjct: 601 VNFVAVRGPELLNKYVGESEKAVREIFRKARAAAPSIIFFDEIDALAISRSSGSEGGSHE 660

Query: 530 MVAT-LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            V T LLN MDGV    GV V+ ATNRP+ I+PAL RPGRLDR           +L   P
Sbjct: 661 GVLTSLLNEMDGVEELVGVTVVGATNRPEVIDPALMRPGRLDR-----------ILYVGP 709

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLRR 646
              P  A R+EIL   +  M    +D +V++  L+  T G  GA++ ++C EAAL+ +++
Sbjct: 710 ---PDHAGRIEILKIRMRKMS---VDPDVDFEELATLTDGCSGAEITSMCQEAALLTMQK 763


>gi|356572464|ref|XP_003554388.1| PREDICTED: cell division cycle protein 48 homolog [Glycine max]
          Length = 808

 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGSSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARGSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 696  QRACKYAIRENIE 708



 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 118/268 (44%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVTNEHFQTALGSSNPSALR 469



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E +S  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EDVDLERISKDTHGYVGADLAALCTEAALQCIR 428



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 116/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A  SAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARGSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPVS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|209865725|gb|ACC66148.3| cell division cycle protein [Dimocarpus longan]
 gi|221327637|gb|ACM17483.1| cell division cycle protein [Dimocarpus longan]
          Length = 805

 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 138/313 (44%), Positives = 192/313 (61%), Gaps = 28/313 (8%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPERFEKFGMAPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENL-----------------------DASRITMQH----LKTAIRHVQPSE 1021
            + A   AI EN+                       D + I   H    +K A R V  ++
Sbjct: 696  QRAVKYAIRENIEKDIERERRRRDNPEAMDEDVEDDVAEIKAAHFEESMKFARRSVSDAD 755

Query: 1022 IHSYKELSAKFQR 1034
            I  Y+  +   Q+
Sbjct: 756  IRKYQAFAQTLQQ 768



 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNTIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  S DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  ++ +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVSNEHFQTALGTSNPSALR 469



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP++I+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNTIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ S  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLS-DDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMAPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPVS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRAVKYAIR 704


>gi|356505246|ref|XP_003521403.1| PREDICTED: cell division cycle protein 48 homolog [Glycine max]
          Length = 808

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGSSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARGSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 696  QRACKYAIRENIE 708



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 164/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++ ++A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEDVDLEKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVTNEHFQTALGSSNPSALR 469



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EDVDLEKIAKDTHGYVGADLAALCTEAALQCIR 428



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 116/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A  SAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARGSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPVS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|449451036|ref|XP_004143268.1| PREDICTED: cell division cycle protein 48 homolog [Cucumis sativus]
          Length = 807

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 696  QRACKYAIRENIE 708



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVTNEHFQTALGTSNPSALR 469



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPVS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|449482441|ref|XP_004156282.1| PREDICTED: LOW QUALITY PROTEIN: cell division cycle protein 48
            homolog [Cucumis sativus]
          Length = 807

 Score =  276 bits (707), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 696  QRACKYAIRENIE 708



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/268 (44%), Positives = 162/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++ PPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYXPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVTNEHFQTALGTSNPSALR 469



 Score =  201 bits (510), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 103/234 (44%), Positives = 154/234 (65%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+ PPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYXPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPVS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|356548285|ref|XP_003542533.1| PREDICTED: cell division cycle protein 48 homolog [Glycine max]
          Length = 811

 Score =  276 bits (707), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARGSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 696  QRACKYAIRENIE 708



 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVTNEHFQTALGTSNPSALR 469



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 116/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A  SAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARGSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPVS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|155212615|gb|ABT17374.1| bacteriorhodopsin-associated chaperone [uncultured haloarchaeon
            FLAS10H9]
          Length = 732

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 137/282 (48%), Positives = 191/282 (67%), Gaps = 13/282 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D + A     P+A    +++VP V  ++VGG  E K +L+  VEWP ++  A  R+   P
Sbjct: 442  DIDTALSTTTPAASSAAVVDVPDVSLDEVGGLSEAKRELVRVVEWPLRYPAALDRLRIDP 501

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KTL+ARA+AS    NF+AV GPELF K+VGESE+AVR +F +AR +A
Sbjct: 502  PAGVLLYGPPGTGKTLLARAIASTTEANFIAVDGPELFDKFVGESERAVREVFRQARESA 561

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDE+D L A RG E  G +  +RV+SQLL ELDGL QR  VTVI ATNRPD++DP
Sbjct: 562  PAVIFFDEVDALGATRGSE--GGAAPERVVSQLLTELDGLEQRKGVTVIGATNRPDRVDP 619

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDR + VG P+ + REEI RIH R+ P   DV+ + LA  ++G +G+D++ + 
Sbjct: 620  ALLRPGRFDRTVEVGLPDSSAREEILRIHARERPL-RDVDFQTLARQTDGYSGSDLAALL 678

Query: 989  REAAISAIEENL--------DASRITMQ--HLKTAIRHVQPS 1020
            REA+++A+EE L        D S + ++  H++  +  V PS
Sbjct: 679  REASLAALEEQLGDGDHTPDDVSDLVIRGHHVEAGLSRVTPS 720



 Score =  166 bits (419), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/236 (40%), Positives = 137/236 (58%), Gaps = 17/236 (7%)

Query: 410 ISKLGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           + ++GGLS+ +  +++ +       + L  L + P  GVLL+GPPGTGKT LAR  A  +
Sbjct: 467 LDEVGGLSEAKRELVRVVEWPLRYPAALDRLRIDPPAGVLLYGPPGTGKTLLARAIASTT 526

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
             N   V+GPE+  +  GESE+A+ EVF  A +SAPAV+F DE+DA+   R   G    +
Sbjct: 527 EANFIAVDGPELFDKFVGESERAVREVFRQARESAPAVIFFDEVDALGATRGSEGGAAPE 586

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+V+ LL  +DG+ +  GV VI ATNRPD ++PAL RPGR DR +E+ +           
Sbjct: 587 RVVSQLLTELDGLEQRKGVTVIGATNRPDRVDPALLRPGRFDRTVEVGL----------- 635

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
              P  + R EIL   +   E  L D + + L+  T G+ G+DLAAL  EA+L  L
Sbjct: 636 ---PDSSAREEILR--IHARERPLRDVDFQTLARQTDGYSGSDLAALLREASLAAL 686



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 10/250 (4%)

Query: 777  VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 836
            VGG          A+  P    +A+   G    TG L+ G  G  K+   R  A  A   
Sbjct: 208  VGGYESTIAACRSALVQPLTAGDAYDAGGESAATGALVVGQSGVGKSHHVRHAAWLANAE 267

Query: 837  FLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDR 896
            F+++    L +     +   + S+ A+A  +A +++  + +D LA      S    +++R
Sbjct: 268  FISLDAARLAAVGHEAAIDHLESIRARATRHARALVHVEGLDALAGAASSGSGAGPMTER 327

Query: 897  VMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRI 956
              S +      L ++  V V A T  P ++   L R  RF R + V  P   DR  IF  
Sbjct: 328  FGSWV----SRLREQPGVVVAAETREPTELADTLTRGDRFGRRIEVPSPTPADRTAIFGT 383

Query: 957  HLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------ENLDASRITMQHL 1010
              R +  + DV    +   + G   AD+  +  +   +A+E      ++ +   +T   +
Sbjct: 384  LTRNLDLAPDVEPATVGERTLGYVAADLVALRAQMVETAVERFRTGTDSEEPVTVTAADI 443

Query: 1011 KTAIRHVQPS 1020
             TA+    P+
Sbjct: 444  DTALSTTTPA 453


>gi|225440045|ref|XP_002282146.1| PREDICTED: cell division cycle protein 48 homolog [Vitis vinifera]
 gi|297741633|emb|CBI32765.3| unnamed protein product [Vitis vinifera]
          Length = 806

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 696  QRACKYAIRENIE 708



 Score =  233 bits (594), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 121/268 (45%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  S DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLSEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H KTA+    PS + 
Sbjct: 442  DAEILNSMAVTDEHFKTALGTSNPSALR 469



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ S  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLS-EDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPVS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|67484218|ref|XP_657329.1| cell division cycle protein 48 [Entamoeba histolytica HM-1:IMSS]
 gi|56474515|gb|EAL51880.1| cell division cycle protein 48, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 794

 Score =  276 bits (706), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 128/257 (49%), Positives = 178/257 (69%)

Query: 742 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
           +L + +  F  A+ KV P+++R+V++EVP VKWED+GG  + K +L E V+WP  H E F
Sbjct: 432 SLVVTMEHFRTAQQKVNPASIRDVVVEVPNVKWEDIGGLEQTKNELKEIVQWPVLHPELF 491

Query: 802 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
           KR G  P  G+L +GPPGC KT+MA+AVA+E   NF++VKGPEL + W GESE  VR++F
Sbjct: 492 KRYGQPPSRGVLFYGPPGCGKTMMAKAVANECQANFISVKGPELLTMWFGESEANVRNIF 551

Query: 862 AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            KAR  AP ++FFDE+D +A  RG  +    VSDRV++QLL E+DG+     V +I ATN
Sbjct: 552 DKARGAAPCVLFFDELDSIAQSRGSNNGDSGVSDRVINQLLTEMDGMSSAKTVFIIGATN 611

Query: 922 RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
           RPD IDPAL RPGR D+L+Y+  P+   R  + + +LRK P + DVN+R++A  +EG +G
Sbjct: 612 RPDIIDPALTRPGRLDQLIYIPLPDLEARVGVLQANLRKSPVAPDVNLRDIANATEGFSG 671

Query: 982 ADISLICREAAISAIEE 998
           AD++ IC+ A   AI E
Sbjct: 672 ADLTAICQRAVKLAIRE 688



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/268 (45%), Positives = 167/268 (62%), Gaps = 17/268 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + ++D+GG R+   ++ E VE P +H + FK IG +PP GIL++GPPGC KT++ARA+A+
Sbjct: 189  IGYDDIGGCRQQLNKIREMVELPLRHPQLFKNIGIKPPRGILLYGPPGCGKTMIARAIAN 248

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DEID +A  R K   G 
Sbjct: 249  ETGAFFFLINGPEIMSKMAGESESNLRRAFEEAEKNSPAIIFIDEIDSIAPKRDKS--GG 306

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV+SQLL  +DGL  R  V VIAATNRP+ ID AL R GRFDR + +G P+   R+
Sbjct: 307  EVERRVVSQLLTLMDGLKARSQVIVIAATNRPNTIDVALRRFGRFDREIDLGIPDTEGRK 366

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN----------LD 1001
            EI +IH +K+  + DV++  LA  + G  GADI+ +C EAA+  I E           +D
Sbjct: 367  EILQIHTKKMKIADDVDLDVLANETHGMVGADIAQLCTEAAMLCIREKIDQIDWDDDTID 426

Query: 1002 ASRI-----TMQHLKTAIRHVQPSEIHS 1024
            AS I     TM+H +TA + V P+ I  
Sbjct: 427  ASLIESLVVTMEHFRTAQQKVNPASIRD 454



 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 145/226 (64%), Gaps = 16/226 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             ++G++P +G+LL+GPPG GKT +AR  A+++G   F +NGPE++S+  GESE  L   
Sbjct: 218 FKNIGIKPPRGILLYGPPGCGKTMIARAIANETGAFFFLINGPEIMSKMAGESESNLRRA 277

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A +++PA++FIDE+D+IAP R   G E+ +R+V+ LL LMDG+     V+VIAATNR
Sbjct: 278 FEEAEKNSPAIIFIDEIDSIAPKRDKSGGEVERRVVSQLLTLMDGLKARSQVIVIAATNR 337

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++I+ ALRR GR DREI++               +P    R EIL      M+ +  D 
Sbjct: 338 PNTIDVALRRFGRFDREIDL--------------GIPDTEGRKEILQIHTKKMKIA-DDV 382

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLR-RYSKIQTSSDVLHST 660
           +++ L+  THG VGAD+A LC EAA++C+R +  +I    D + ++
Sbjct: 383 DLDVLANETHGMVGADIAQLCTEAAMLCIREKIDQIDWDDDTIDAS 428



 Score =  152 bits (385), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 137/248 (55%), Gaps = 22/248 (8%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    LK+I+    +   L    G  P++GVL +GPPG GKT +A+  A++   N
Sbjct: 467 IGGLEQTKNELKEIVQWPVLHPELFKRYGQPPSRGVLFYGPPGCGKTMMAKAVANECQAN 526

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             +V GPE+++  +GESE  +  +FD A  +AP V+F DELD+IA +R   +G   +S R
Sbjct: 527 FISVKGPELLTMWFGESEANVRNIFDKARGAAPCVLFFDELDSIAQSRGSNNGDSGVSDR 586

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++  LL  MDG+     V +I ATNRPD I+PAL RPGRLD+ I I              
Sbjct: 587 VINQLLTEMDGMSSAKTVFIIGATNRPDIIDPALTRPGRLDQLIYI-------------- 632

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV----CLR 645
            +P    R+ +L A L     +  D  +  ++ AT GF GADL A+C  A  +    C++
Sbjct: 633 PLPDLEARVGVLQANLRKSPVA-PDVNLRDIANATEGFSGADLTAICQRAVKLAIRECIK 691

Query: 646 RYSKIQTS 653
           +  +IQ S
Sbjct: 692 KEIEIQES 699


>gi|238061363|ref|ZP_04606072.1| microtubule-severing ATPase [Micromonospora sp. ATCC 39149]
 gi|237883174|gb|EEP72002.1| microtubule-severing ATPase [Micromonospora sp. ATCC 39149]
          Length = 755

 Score =  276 bits (706), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 135/272 (49%), Positives = 179/272 (65%), Gaps = 1/272 (0%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A   VRP+ M    LE+  V  +DVG   EVK  L E+V WP  + + F R+G +P
Sbjct: 466  DFTAALEVVRPTTMAASTLELADVTLDDVGDMVEVKQTLTESVLWPLTYPDTFARLGVQP 525

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPGC KT +  A+A     N L+VKG EL SKWVGESE+AVR LF +AR  A
Sbjct: 526  PRGVLLYGPPGCGKTYLVTALAGSGRANVLSVKGAELLSKWVGESERAVRELFRRAREAA 585

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IF DE+D LA +RG+ SDG   +DRV++ LL ELDG+    NV V+ ATNRPD +DP
Sbjct: 586  PTLIFLDEVDALAPVRGQASDG-GTTDRVVAALLTELDGVESLRNVVVVGATNRPDLVDP 644

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR +RL+YV PP+   R EI R   R +P + DV+I  L    +G + AD + + 
Sbjct: 645  ALLRPGRLERLVYVPPPDGVARAEILRAAARNVPFADDVDIAALGDGLDGFSAADCAALV 704

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            REAA++A+ E+L AS +T  H++ A R V PS
Sbjct: 705  REAALAAMRESLTASTVTAGHVEAARRRVGPS 736



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 123/214 (57%), Gaps = 20/214 (9%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
           T + LG++P +GVLL+GPPG GKT L    A     N+ +V G E++S+  GESE+A+ E
Sbjct: 517 TFARLGVQPPRGVLLYGPPGCGKTYLVTALAGSGRANVLSVKGAELLSKWVGESERAVRE 576

Query: 495 VFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           +F  A ++AP ++F+DE+DA+AP R    DGG   + R+VA LL  +DGV     V+V+ 
Sbjct: 577 LFRRAREAAPTLIFLDEVDALAPVRGQASDGGT--TDRVVAALLTELDGVESLRNVVVVG 634

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD ++PAL RPGRL+R + +                P    R EIL A    +  +
Sbjct: 635 ATNRPDLVDPALLRPGRLERLVYVPP--------------PDGVARAEILRAAARNVPFA 680

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L     GF  AD AAL  EAAL  +R
Sbjct: 681 -DDVDIAALGDGLDGFSAADCAALVREAALAAMR 713



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 11/252 (4%)

Query: 775  EDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAG 834
            +++ G R    +L E ++    H+E   R+GT    G+L+ GP G  K+ + RAVA+  G
Sbjct: 239  DELPGLRAQAEELTELLDLGFHHREVLGRLGTTVSLGVLVAGPAGSGKSALVRAVAARVG 298

Query: 835  LNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS 894
                 +  PEL +     + + +R+     R N P+++   +++ LA      +D     
Sbjct: 299  ARVRPLWAPELAALTNDAAARRLRAAADDVRGNGPAVLLVTDVEALA-----PADDAGPV 353

Query: 895  DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIF 954
              V  Q+L E      R  V V+  T+RP+ +DP L  P      + V  P++  R E  
Sbjct: 354  STVFRQVLAE----TVRAGVAVVCTTSRPEAVDPGLRAPDLLSLRITVPLPDQALRREQL 409

Query: 955  RIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--EENLDASRITMQHLKT 1012
             +  R++P + DV + E+A  + G   AD++ + REA + A   +++ DA  + M     
Sbjct: 410  TVLTRQVPLAEDVRLDEVAGRTPGFVAADLAALVREAGVRAALRQKSADAPTVAMGDFTA 469

Query: 1013 AIRHVQPSEIHS 1024
            A+  V+P+ + +
Sbjct: 470  ALEVVRPTTMAA 481



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 26/223 (11%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           +  L  LG   + GVL+ GP G+GK++L R  A   G  +  +  PE+ +     + + L
Sbjct: 262 REVLGRLGTTVSLGVLVAGPAGSGKSALVRAVAARVGARVRPLWAPELAALTNDAAARRL 321

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
               D    + PAV+ + +++A+APA  D G       V+T+   +       GV V+  
Sbjct: 322 RAAADDVRGNGPAVLLVTDVEALAPA-DDAGP------VSTVFRQVLAETVRAGVAVVCT 374

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           T+RP++++P LR P  L   I + +              P  A R E L  L   +  + 
Sbjct: 375 TSRPEAVDPGLRAPDLLSLRITVPL--------------PDQALRREQLTVLTRQVPLA- 419

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 655
            D  ++ ++  T GFV ADLAAL  EA +    R +  Q S+D
Sbjct: 420 EDVRLDEVAGRTPGFVAADLAALVREAGV----RAALRQKSAD 458


>gi|365882815|ref|ZP_09422002.1| Cell division cycle protein 48 homolog AF_1297 [Bradyrhizobium sp.
            ORS 375]
 gi|365288799|emb|CCD94533.1| Cell division cycle protein 48 homolog AF_1297 [Bradyrhizobium sp.
            ORS 375]
          Length = 715

 Score =  276 bits (706), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 133/271 (49%), Positives = 189/271 (69%), Gaps = 3/271 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L + L DF+ A  +VRPSA+REV  +VP+V+W ++GG  ++K +L+EAV WP    + F 
Sbjct: 420  LCIGLADFQTALSEVRPSAIREVYTDVPQVRWSEIGGMADIKQELIEAVIWPLTRSQLFA 479

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
             +G RP  G+L+ GPPG  KTL+ARA+ASEA +NF+AV+GPEL  ++VGESE+AVR +F 
Sbjct: 480  DLGVRPAKGVLLTGPPGTGKTLLARALASEAQVNFIAVRGPELLDRFVGESERAVRDVFV 539

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KARA +P+IIFFDEID LA +RG+     +VSDRV++QLL E+DG+ +   V ++AATNR
Sbjct: 540  KARATSPTIIFFDEIDSLAPVRGQSG---AVSDRVVAQLLTEIDGIEELKGVFLLAATNR 596

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             D+++PALLRPGRFDR+  V  PN   R EI  +   K+P   DV++  +A  +EG  GA
Sbjct: 597  IDQVEPALLRPGRFDRVFAVPSPNCATRAEILAVQSAKLPLGRDVDLGAIAAATEGFVGA 656

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTA 1013
            +++ IC+EA   A+   + ASR  +  +  A
Sbjct: 657  ELAAICQEAGRIALRRAVAASRDALVQIDQA 687



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/264 (40%), Positives = 156/264 (59%), Gaps = 12/264 (4%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG      ++ E +E P +  + F R+G   P G+L+ GPPG  KTL+ARAVA 
Sbjct: 177  ISYEDLGGLSRELGRVREMIELPIRRPDLFARLGIEAPKGVLLSGPPGTGKTLLARAVAQ 236

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E    F  + GPE+ SK  G+SE  +RS+F KA+A AP+IIF DEID +A  R +     
Sbjct: 237  ECEAAFFQIDGPEIVSKHYGDSEAKLRSIFQKAQARAPAIIFIDEIDAIAPQRARLGGDR 296

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             +  R+++QLL  LDG+  R  V V+AATN PD +DPAL RPGRFDR + +G P+ + R 
Sbjct: 297  QLEGRLVAQLLTLLDGVSSRGLVIVMAATNLPDNLDPALRRPGRFDREIAIGVPDRSGRL 356

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE------------N 999
            EI  IH R +P   DV++ ++A  + G  GAD++ + REA ++ +              +
Sbjct: 357  EILAIHTRGVPLGPDVDLAQIAAATHGFVGADLAALVREAGMATLRRAAAFESSALDGIS 416

Query: 1000 LDASRITMQHLKTAIRHVQPSEIH 1023
            L+   I +   +TA+  V+PS I 
Sbjct: 417  LEELCIGLADFQTALSEVRPSAIR 440



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/294 (41%), Positives = 166/294 (56%), Gaps = 38/294 (12%)

Query: 364 NAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAIL 423
            A VI  ET++         S +   G  P   I +++           LGGLS+E   +
Sbjct: 153 GAVVIGRETRI---------SFAAASGEAPPRTISYED-----------LGGLSRELGRV 192

Query: 424 KDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVS 482
           +++I +        + LG+   KGVLL GPPGTGKT LAR  A +     F ++GPE+VS
Sbjct: 193 REMIELPIRRPDLFARLGIEAPKGVLLSGPPGTGKTLLARAVAQECEAAFFQIDGPEIVS 252

Query: 483 QNYGESEQALHEVFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDG 540
           ++YG+SE  L  +F  A   APA++FIDE+DAIAP  AR  G  +L  R+VA LL L+DG
Sbjct: 253 KHYGDSEAKLRSIFQKAQARAPAIIFIDEIDAIAPQRARLGGDRQLEGRLVAQLLTLLDG 312

Query: 541 VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEI 600
           V     V+V+AATN PD+++PALRRPGR DREI I               VP  + RLEI
Sbjct: 313 VSSRGLVIVMAATNLPDNLDPALRRPGRFDREIAI--------------GVPDRSGRLEI 358

Query: 601 LHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSS 654
           L     G+     D ++  ++ ATHGFVGADLAAL  EA +  LRR +  ++S+
Sbjct: 359 LAIHTRGVPLG-PDVDLAQIAAATHGFVGADLAALVREAGMATLRRAAAFESSA 411



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/250 (43%), Positives = 149/250 (59%), Gaps = 23/250 (9%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S++GG++     L + +I    +S L + LG+RP KGVLL GPPGTGKT LAR  A ++ 
Sbjct: 452 SEIGGMADIKQELIEAVIWPLTRSQLFADLGVRPAKGVLLTGPPGTGKTLLARALASEAQ 511

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           VN   V GPE++ +  GESE+A+ +VF  A  ++P ++F DE+D++AP R   G  +S R
Sbjct: 512 VNFIAVRGPELLDRFVGESERAVRDVFVKARATSPTIIFFDEIDSLAPVRGQSG-AVSDR 570

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +VA LL  +DG+    GV ++AATNR D +EPAL RPGR DR                  
Sbjct: 571 VVAQLLTEIDGIEELKGVFLLAATNRIDQVEPALLRPGRFDRVF---------------- 614

Query: 590 AVPSP--AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           AVPSP  A R EIL A+ S       D ++  ++ AT GFVGA+LAA+C EA  + LRR 
Sbjct: 615 AVPSPNCATRAEIL-AVQSAKLPLGRDVDLGAIAAATEGFVGAELAAICQEAGRIALRR- 672

Query: 648 SKIQTSSDVL 657
             +  S D L
Sbjct: 673 -AVAASRDAL 681


>gi|167566373|ref|ZP_02359289.1| cell division control protein 48 ATPase of AAA family CDC48
           subfamily [Burkholderia oklahomensis EO147]
 gi|167573485|ref|ZP_02366359.1| cell division control protein 48 ATPase of AAA family CDC48
           subfamily [Burkholderia oklahomensis C6786]
          Length = 713

 Score =  276 bits (705), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 130/254 (51%), Positives = 178/254 (70%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           L + + DF  A  ++ PSA+REV +E+P V+WEDVGG    K QL+EA+EWP K+ E   
Sbjct: 424 LVVNMDDFLSALAEIDPSAIREVFVEIPDVRWEDVGGLGNTKAQLIEALEWPLKYPELLT 483

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
           R G +P  GIL+ GPPGC KT +A+A A+E G+NF+ VKGPEL SK++GESEK VR +F 
Sbjct: 484 RAGAKPSKGILLVGPPGCGKTWLAKAAANECGVNFIPVKGPELMSKYIGESEKGVRDVFR 543

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
           KAR  AP ++FFDEID LA  RG+ + G  V +R++SQ L E DG+     V V+AATNR
Sbjct: 544 KARHAAPCLLFFDEIDALAPRRGEGASGAHVPERLLSQFLAEFDGIEDLKGVMVLAATNR 603

Query: 923 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
            D +DPA+LRPGRFD ++ +  P+   R EIF +HLR+ P ++DV   +LA  S+G + A
Sbjct: 604 IDMLDPAVLRPGRFDEIIEIALPDPAARREIFDVHLRRKPLATDVASEQLAAESDGFSAA 663

Query: 983 DISLICREAAISAI 996
           +I+ +CR AA+SA+
Sbjct: 664 EIASVCRRAALSAV 677



 Score =  211 bits (536), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 107/269 (39%), Positives = 159/269 (59%), Gaps = 17/269 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P + +ED+GG +    ++ E +E P ++ E F+R+G   P G+L++GPPGC KTL+ARA+
Sbjct: 178  PTLSYEDIGGLKPQLMRIREMIELPLRYPEVFERLGVDAPKGVLLYGPPGCGKTLIARAI 237

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E    F A+ GPE+  K+ GESE  +R +F +A   AP+I+F DE+D +A  R  E+ 
Sbjct: 238  AHECDATFFALSGPEVIHKFYGESEAHLRKIFEEAARKAPAIVFLDEVDAIAPKR--ETV 295

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V  RV++QLL  +DGL+ R  V VIAATN P+ +DPAL RPGRFDR + +  P+   
Sbjct: 296  VGEVEKRVVAQLLALMDGLNGRQQVIVIAATNLPNALDPALRRPGRFDREIAIPIPDRNG 355

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R E+  IH R +P ++DV +  LA ++ G  GAD+  +C+EAA+  +             
Sbjct: 356  RLEVLEIHSRGMPLAADVELDHLADITHGFVGADLEALCKEAAMLCLRRLLSELDLGLRS 415

Query: 998  ---ENLDASRITMQHLKTAIRHVQPSEIH 1023
               E LD   + M    +A+  + PS I 
Sbjct: 416  ISYEQLDRLVVNMDDFLSALAEIDPSAIR 444



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +          LG+   KGVLL+GPPG GKT +AR  AH+    
Sbjct: 185 IGGLKPQLMRIREMIELPLRYPEVFERLGVDAPKGVLLYGPPGCGKTLIARAIAHECDAT 244

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F ++GPEV+ + YGESE  L ++F+ A++ APA+VF+DE+DAIAP R+    E+ +R+V
Sbjct: 245 FFALSGPEVIHKFYGESEAHLRKIFEEAARKAPAIVFLDEVDAIAPKRETVVGEVEKRVV 304

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATN P++++PALRRPGR DREI I               +
Sbjct: 305 AQLLALMDGLNGRQQVIVIAATNLPNALDPALRRPGRFDREIAI--------------PI 350

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    RLE+L     GM  +  D E+++L+  THGFVGADL ALC EAA++CLRR
Sbjct: 351 PDRNGRLEVLEIHSRGMPLA-ADVELDHLADITHGFVGADLEALCKEAAMLCLRR 404



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 17/213 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           L+  G +P+KG+LL GPPG GKT LA+  A++ GVN   V GPE++S+  GESE+ + +V
Sbjct: 482 LTRAGAKPSKGILLVGPPGCGKTWLAKAAANECGVNFIPVKGPELMSKYIGESEKGVRDV 541

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG--GEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A  +AP ++F DE+DA+AP R +G  G  + +R+++  L   DG+    GV+V+AAT
Sbjct: 542 FRKARHAAPCLLFFDEIDALAPRRGEGASGAHVPERLLSQFLAEFDGIEDLKGVMVLAAT 601

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NR D ++PA+ RPGR D  IEI              A+P PA R EI    L     +  
Sbjct: 602 NRIDMLDPAVLRPGRFDEIIEI--------------ALPDPAARREIFDVHLRRKPLA-T 646

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           D   E L+  + GF  A++A++C  AAL  +RR
Sbjct: 647 DVASEQLAAESDGFSAAEIASVCRRAALSAVRR 679


>gi|449440656|ref|XP_004138100.1| PREDICTED: cell division cycle protein 48 homolog [Cucumis sativus]
          Length = 819

 Score =  276 bits (705), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 200/323 (61%), Gaps = 15/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V W+D+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 468  FQTALGSSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 527

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 528  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 587

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 588  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDP 647

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E+ R +IF+  LRK P + DVN+  LA  + G +GADI+ IC
Sbjct: 648  ALLRPGRLDQLIYIPLPDESSRLQIFKACLRKSPVAKDVNLSALAGYTHGFSGADITEIC 707

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++      +        ++  EI    E+ A       K+ R   S ++
Sbjct: 708  QRACKYAIRENIEKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYAR--RSVSD 765

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+ IGS  
Sbjct: 766  ADIRKYQLFAQTLQQSRGIGSEF 788



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 162/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 216  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 275

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DE+D +A  R K    
Sbjct: 276  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHG- 334

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V +I ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 335  -EVERRIVSQLLTLMDGLKTRAHVIIIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 393

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+  IH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 394  LEVLSIHTKNMKLAEDVDLERVARDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 453

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  ++ +H +TA+    PS + 
Sbjct: 454  DAEVLNSMAVSNEHFQTALGSSNPSALR 481



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/344 (37%), Positives = 194/344 (56%), Gaps = 34/344 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 222 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 281

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDELD+IAP R+    E+ +R+V
Sbjct: 282 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIV 341

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V++I ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 342 SQLLTLMDGLKTRAHVIIIGATNRPNSIDPALRRFGRFDREIDI--------------GV 387

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R    + 
Sbjct: 388 PDEVGRLEVLSIHTKNMKLA-EDVDLERVARDTHGYVGADLAALCTEAALQCIREKMDVI 446

Query: 651 -----QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
                   ++VL+S     E   H  T L  S+ S     + R+ +      + D    L
Sbjct: 447 DLEDETIDAEVLNSMAVSNE---HFQTALGSSNPS-----ALRETVVEVPNVSWDDIGGL 498

Query: 706 LSSSLPLRGTVS---EIADNFHN-GVSDSSGGMFMSEKGCALKL 745
            +    L+ TV    E  + F   G+S S G +F    GC   L
Sbjct: 499 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 542



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 119/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 519 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 578

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 579 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMTAKKTVFIIG 637

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P  + RL+I  A L     +
Sbjct: 638 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDESSRLQIFKACLRKSPVA 683

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D  +  L+  THGF GAD+  +C  A    +R
Sbjct: 684 -KDVNLSALAGYTHGFSGADITEICQRACKYAIR 716


>gi|374725109|gb|EHR77189.1| cell division cycle protein 48, AAA family ATPase [uncultured marine
            group II euryarchaeote]
          Length = 742

 Score =  276 bits (705), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 132/280 (47%), Positives = 196/280 (70%), Gaps = 5/280 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +++ + DF++A   V PSA+RE+ +E+P+V WE+VGG  EVK +L E+VEWP    E F+
Sbjct: 430  MEVRMDDFKEAIKDVEPSALREIYVEIPEVTWEEVGGLHEVKDRLKESVEWPLTQPELFE 489

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
              G +PP GI++FG PG  KTL+A+A+A+EA  NF+++KGPEL SKWVGESE+A+R +F 
Sbjct: 490  HFGIKPPRGIVLFGAPGTGKTLLAKAIANEAQANFISIKGPELISKWVGESERAIREIFK 549

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESD--GVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
            KA+ ++P+IIF DE + +A++R   SD  G  VS+RV++QLL  +DG+     V ++AAT
Sbjct: 550  KAKQSSPAIIFLDEFESIASMRSSNSDGGGSDVSNRVVNQLLASMDGVESLDGVIIVAAT 609

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRP+ IDPALLR GRF+R+L+V PP+   RE IF IH   +P S   +++++    +G T
Sbjct: 610  NRPEMIDPALLRSGRFERVLHVPPPDLGARESIFAIHSEGMPLSK-FSLKDIMGGLDGFT 668

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            GADI  +CREAA+  +       ++T  H + AI+ V+P+
Sbjct: 669  GADIEAVCREAALICMRAK--KKKVTKSHFEEAIKRVRPT 706



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 114/273 (41%), Positives = 164/273 (60%), Gaps = 18/273 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +EDVGG  +   ++ E +E P KH E F+R+G  PP G+L+ GPPG  KT++A+AVA+
Sbjct: 186  ITYEDVGGIGQQLQKVREMIELPLKHPELFRRLGIDPPKGVLLHGPPGTGKTMIAKAVAT 245

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   +F ++ GPE+ SK+ GESEK +R +F +A  N+P+IIF DEID +   R  E    
Sbjct: 246  EVNAHFKSINGPEIISKYYGESEKQLREIFDEAAENSPAIIFIDEIDSICPKR--EDVSG 303

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++Q+L  +DG+  R NV VI ATNR D +DPAL RPGRFDR + +G P+   RE
Sbjct: 304  EVERRVVAQMLTLMDGMQGRDNVVVIGATNRRDALDPALRRPGRFDREIEIGVPDRDGRE 363

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI  +H R++P S D  I  +   + G  GAD++ + REAA+ A+               
Sbjct: 364  EIMDVHTRQMPISEDFEINWVLDNTYGFVGADLAALVREAAMRALRRYLPEIELEEETIP 423

Query: 998  -ENLDASRITMQHLKTAIRHVQPSEIHS-YKEL 1028
             E L+   + M   K AI+ V+PS +   Y E+
Sbjct: 424  PEVLEKMEVRMDDFKEAIKDVEPSALREIYVEI 456



 Score =  206 bits (524), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 107/236 (45%), Positives = 152/236 (64%), Gaps = 16/236 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ ++   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A +   +
Sbjct: 191 VGGIGQQLQKVREMIELPLKHPELFRRLGIDPPKGVLLHGPPGTGKTMIAKAVATEVNAH 250

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             ++NGPE++S+ YGESE+ L E+FD A++++PA++FIDE+D+I P R+D   E+ +R+V
Sbjct: 251 FKSINGPEIISKYYGESEKQLREIFDEAAENSPAIIFIDEIDSICPKREDVSGEVERRVV 310

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A +L LMDG+   D V+VI ATNR D+++PALRRPGR DREIEI               V
Sbjct: 311 AQMLTLMDGMQGRDNVVVIGATNRRDALDPALRRPGRFDREIEI--------------GV 356

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P    R EI+      M  S  D E+ ++   T+GFVGADLAAL  EAA+  LRRY
Sbjct: 357 PDRDGREEIMDVHTRQMPIS-EDFEINWVLDNTYGFVGADLAALVREAAMRALRRY 411



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 20/223 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G++P +G++L G PGTGKT LA+  A+++  N  ++ GPE++S+  GESE+A+ E+
Sbjct: 488 FEHFGIKPPRGIVLFGAPGTGKTLLAKAIANEAQANFISIKGPELISKWVGESERAIREI 547

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           F  A QS+PA++F+DE ++IA  R      GG ++S R+V  LL  MDGV   DGV+++A
Sbjct: 548 FKKAKQSSPAIIFLDEFESIASMRSSNSDGGGSDVSNRVVNQLLASMDGVESLDGVIIVA 607

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRP+ I+PAL R GR +R           +L   P   P    R  I      GM  S
Sbjct: 608 ATNRPEMIDPALLRSGRFER-----------VLHVPP---PDLGARESIFAIHSEGMPLS 653

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSS 654
                ++ +     GF GAD+ A+C EAAL+C+R   K  T S
Sbjct: 654 KFS--LKDIMGGLDGFTGADIEAVCREAALICMRAKKKKVTKS 694


>gi|449706024|gb|EMD45953.1| transitional endoplasmic reticulum ATPase, putative [Entamoeba
           histolytica KU27]
          Length = 794

 Score =  276 bits (705), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 128/257 (49%), Positives = 178/257 (69%)

Query: 742 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
           +L + +  F  A+ KV P+++R+V++EVP VKWED+GG  + K +L E V+WP  H E F
Sbjct: 432 SLVVTMEHFRTAQQKVNPASIRDVVVEVPNVKWEDIGGLEQTKNELKEIVQWPVLHPELF 491

Query: 802 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
           KR G  P  G+L +GPPGC KT+MA+AVA+E   NF++VKGPEL + W GESE  VR++F
Sbjct: 492 KRYGQPPSRGVLFYGPPGCGKTMMAKAVANECQANFISVKGPELLTMWFGESEANVRNIF 551

Query: 862 AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            KAR  AP ++FFDE+D +A  RG  +    VSDRV++QLL E+DG+     V +I ATN
Sbjct: 552 DKARGAAPCVLFFDELDSIAQSRGSNNGDSGVSDRVINQLLTEMDGMSSAKTVFIIGATN 611

Query: 922 RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
           RPD IDPAL RPGR D+L+Y+  P+   R  + + +LRK P + DVN+R++A  +EG +G
Sbjct: 612 RPDIIDPALTRPGRLDQLIYIPLPDLEARVGVLQANLRKSPVAPDVNLRDIANATEGFSG 671

Query: 982 ADISLICREAAISAIEE 998
           AD++ IC+ A   AI E
Sbjct: 672 ADLTAICQRAVKLAIRE 688



 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 122/268 (45%), Positives = 167/268 (62%), Gaps = 17/268 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + ++D+GG R+   ++ E VE P +H + FK IG +PP GIL++GPPGC KT++ARA+A+
Sbjct: 189  IGYDDIGGCRQQLNKIREMVELPLRHPQLFKNIGIKPPRGILLYGPPGCGKTMIARAIAN 248

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DEID +A  R K   G 
Sbjct: 249  ETGAFFFLINGPEIMSKMAGESESNLRRAFEEAEKNSPAIIFIDEIDSIAPKRDKS--GG 306

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV+SQLL  +DGL  R  V VIAATNRP+ ID AL R GRFDR + +G P+   R+
Sbjct: 307  EVERRVVSQLLTLMDGLKARSQVIVIAATNRPNTIDVALRRFGRFDREIDLGIPDTEGRK 366

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN----------LD 1001
            EI +IH +K+  + DV++  LA  + G  GADI+ +C EAA+  I E           +D
Sbjct: 367  EILQIHTKKMKIADDVDLDVLANETHGMVGADIAQLCTEAAMLCIREKIDQIDWDDDTID 426

Query: 1002 ASRI-----TMQHLKTAIRHVQPSEIHS 1024
            AS I     TM+H +TA + V P+ I  
Sbjct: 427  ASLIESLVVTMEHFRTAQQKVNPASIRD 454



 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 145/226 (64%), Gaps = 16/226 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             ++G++P +G+LL+GPPG GKT +AR  A+++G   F +NGPE++S+  GESE  L   
Sbjct: 218 FKNIGIKPPRGILLYGPPGCGKTMIARAIANETGAFFFLINGPEIMSKMAGESESNLRRA 277

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A +++PA++FIDE+D+IAP R   G E+ +R+V+ LL LMDG+     V+VIAATNR
Sbjct: 278 FEEAEKNSPAIIFIDEIDSIAPKRDKSGGEVERRVVSQLLTLMDGLKARSQVIVIAATNR 337

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++I+ ALRR GR DREI++               +P    R EIL      M+ +  D 
Sbjct: 338 PNTIDVALRRFGRFDREIDL--------------GIPDTEGRKEILQIHTKKMKIA-DDV 382

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLR-RYSKIQTSSDVLHST 660
           +++ L+  THG VGAD+A LC EAA++C+R +  +I    D + ++
Sbjct: 383 DLDVLANETHGMVGADIAQLCTEAAMLCIREKIDQIDWDDDTIDAS 428



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 137/248 (55%), Gaps = 22/248 (8%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +    LK+I+    +   L    G  P++GVL +GPPG GKT +A+  A++   N
Sbjct: 467 IGGLEQTKNELKEIVQWPVLHPELFKRYGQPPSRGVLFYGPPGCGKTMMAKAVANECQAN 526

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             +V GPE+++  +GESE  +  +FD A  +AP V+F DELD+IA +R   +G   +S R
Sbjct: 527 FISVKGPELLTMWFGESEANVRNIFDKARGAAPCVLFFDELDSIAQSRGSNNGDSGVSDR 586

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++  LL  MDG+     V +I ATNRPD I+PAL RPGRLD+ I I              
Sbjct: 587 VINQLLTEMDGMSSAKTVFIIGATNRPDIIDPALTRPGRLDQLIYI-------------- 632

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV----CLR 645
            +P    R+ +L A L     +  D  +  ++ AT GF GADL A+C  A  +    C++
Sbjct: 633 PLPDLEARVGVLQANLRKSPVA-PDVNLRDIANATEGFSGADLTAICQRAVKLAIRECIK 691

Query: 646 RYSKIQTS 653
           +  +IQ S
Sbjct: 692 KEIEIQES 699


>gi|98962497|gb|ABF59516.1| putative spindle disassembly related protein CDC48 [Nicotiana
            tabacum]
          Length = 808

 Score =  276 bits (705), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 127/253 (50%), Positives = 177/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S D+++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 696  QRACKYAIRENIE 708



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 162/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EIGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + +V++  +   + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEEVDLERIGKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVTNEHFQTALGTSNPSALR 469



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 102/234 (43%), Positives = 154/234 (65%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  + ++E +   THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EEVDLERIGKDTHGYVGADLAALCTEAALQCIR 428



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDEDSRHQIFKACLRKSPLS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDIDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|407465786|ref|YP_006776668.1| ATPase AAA [Candidatus Nitrosopumilus sp. AR2]
 gi|407048974|gb|AFS83726.1| ATPase AAA [Candidatus Nitrosopumilus sp. AR2]
          Length = 710

 Score =  276 bits (705), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 137/280 (48%), Positives = 189/280 (67%), Gaps = 8/280 (2%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +VRPSA+REV +++P V W+DVGG  E+K +L EAVEWP K+++A+  +    
Sbjct: 424  DFRDALKEVRPSALREVQVQIPNVSWDDVGGLDELKEELKEAVEWPIKYKDAYDFVDVES 483

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+ GPPG  KTL+A+A+A     NF+++KGPEL SKWVGESEK VR +F KAR  A
Sbjct: 484  PKGILLHGPPGTGKTLIAKALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKARQAA 543

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P IIF DE+D L   RG  SD   V++ V+SQ+L E+DGL +  NV +I ATNR D +D 
Sbjct: 544  PCIIFLDEVDALVPRRGSGSDS-HVTENVVSQILTEIDGLEELHNVLIIGATNRLDIVDE 602

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFDR++ V  P+E  R+ IF IH +K P +SDV I E+  L++  +GA+I+ + 
Sbjct: 603  ALLRPGRFDRIIKVPNPDEKGRQHIFEIHTKKKPLASDVKISEIVKLTDDFSGAEIAAVT 662

Query: 989  REAAISAIE-------ENLDASRITMQHLKTAIRHVQPSE 1021
              AAI+A++       +N+   +IT Q L  A+  V+P +
Sbjct: 663  NRAAITALKRYVTTKSKNVKEIKITQQDLIDAVDKVRPKK 702



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 109/267 (40%), Positives = 167/267 (62%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            VP++ ++++GG +    ++ E VE P +H E F +IG   P G+L++GPPG  KTL+A+A
Sbjct: 171  VPRITYDELGGLKNEVQKIREMVELPMRHPELFDKIGVEAPKGVLLYGPPGTGKTLLAKA 230

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA E   +F+++ GPE+  K  GESE+ +R +F +A  NAPSIIF DEID +A  R + S
Sbjct: 231  VAGETNAHFISLSGPEIMGKHYGESEERIREIFTQAEENAPSIIFIDEIDSIAPKRDEVS 290

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                +  R++SQLL  +DG+  R  V VIAATNRPD IDPAL RPGRFDR + +G P++ 
Sbjct: 291  G--ELEKRIVSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEIGIPDDE 348

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI-----EENLDAS 1003
             R +I  IH R +P    V++++++  + G  GAD+ ++ +EAA+ ++     E +LD  
Sbjct: 349  GRFDILSIHTRGMPIDDKVDLKQISKTTHGFVGADLEVLSKEAAMRSLRRILPEIDLDEE 408

Query: 1004 R----------ITMQHLKTAIRHVQPS 1020
            +          IT    + A++ V+PS
Sbjct: 409  KISSEILQKIQITSNDFRDALKEVRPS 435



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/238 (44%), Positives = 150/238 (63%), Gaps = 20/238 (8%)

Query: 412 KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           +LGGL  E   +++++ +          +G+   KGVLL+GPPGTGKT LA+  A ++  
Sbjct: 178 ELGGLKNEVQKIREMVELPMRHPELFDKIGVEAPKGVLLYGPPGTGKTLLAKAVAGETNA 237

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM 530
           +  +++GPE++ ++YGESE+ + E+F  A ++AP+++FIDE+D+IAP R +   EL +R+
Sbjct: 238 HFISLSGPEIMGKHYGESEERIREIFTQAEENAPSIIFIDEIDSIAPKRDEVSGELEKRI 297

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ LL LMDG+     V+VIAATNRPDSI+PALRRPGR DREIEI               
Sbjct: 298 VSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEI--------------G 343

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLRR 646
           +P    R +IL     GM    +D +V+   +S  THGFVGADL  L  EAA+  LRR
Sbjct: 344 IPDDEGRFDILSIHTRGMP---IDDKVDLKQISKTTHGFVGADLEVLSKEAAMRSLRR 398



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 142/269 (52%), Gaps = 31/269 (11%)

Query: 385 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 443
           K +R   L   Q++  NV          +GGL +    LK+ +      K     + +  
Sbjct: 430 KEVRPSALREVQVQIPNVSW------DDVGGLDELKEELKEAVEWPIKYKDAYDFVDVES 483

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
            KG+LLHGPPGTGKT +A+  A  +  N  ++ GPE++S+  GESE+ + E+F  A Q+A
Sbjct: 484 PKGILLHGPPGTGKTLIAKALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKARQAA 543

Query: 504 PAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPA 562
           P ++F+DE+DA+ P R  G +  +++ +V+ +L  +DG+     VL+I ATNR D ++ A
Sbjct: 544 PCIIFLDEVDALVPRRGSGSDSHVTENVVSQILTEIDGLEELHNVLIIGATNRLDIVDEA 603

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSP----AQRLEILHALLSGMEHSLLDSEVE 618
           L RPGR DR I+                VP+P     Q +  +H     +   +  SE+ 
Sbjct: 604 LLRPGRFDRIIK----------------VPNPDEKGRQHIFEIHTKKKPLASDVKISEIV 647

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRRY 647
            L   T  F GA++AA+ N AA+  L+RY
Sbjct: 648 KL---TDDFSGAEIAAVTNRAAITALKRY 673


>gi|242036895|ref|XP_002465842.1| hypothetical protein SORBIDRAFT_01g046840 [Sorghum bicolor]
 gi|241919696|gb|EER92840.1| hypothetical protein SORBIDRAFT_01g046840 [Sorghum bicolor]
          Length = 810

 Score =  276 bits (705), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 201/323 (62%), Gaps = 15/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 457  FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 516

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 517  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 576

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 577  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 636

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 637  ALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEIC 696

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++      +  K     ++  E+    E+ A       KF R   S ++
Sbjct: 697  QRACKYAIRENIEKDIERERRRKDNPEAMEEDEVDDIAEIKAAHFEESMKFAR--RSVSD 754

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+  GS  
Sbjct: 755  ADIRKYQAFAQTLQQSRGFGSEF 777



 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 162/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL+FGPPG  KTL+ARAVA
Sbjct: 205  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLFGPPGSGKTLIARAVA 264

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 265  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 323

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 324  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 382

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + +V++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 383  LEVLRIHTKNMKLAENVDLELIAKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETI 442

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H KTA+    PS + 
Sbjct: 443  DAEILNSMAVTNDHFKTALGTSNPSALR 470



 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 103/239 (43%), Positives = 155/239 (64%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL GPPG+GKT +AR  A+++G  
Sbjct: 211 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLFGPPGSGKTLIARAVANETGAF 270

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 271 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 330

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 331 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 376

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  + ++E ++  THG+VGADLAALC EAAL C+R    I
Sbjct: 377 PDEVGRLEVLRIHTKNMKLA-ENVDLELIAKDTHGYVGADLAALCTEAALQCIREKMDI 434



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 508 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 567

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 568 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 626

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P    RL+I  A L     +
Sbjct: 627 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDEQSRLQIFKACLRKSPVA 672

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 673 -KDVDLNALAKYTQGFSGADITEICQRACKYAIR 705


>gi|452206604|ref|YP_007486726.1| AAA-type ATPase (CDC48 subfamily) [Natronomonas moolapensis 8.8.11]
 gi|452082704|emb|CCQ35971.1| AAA-type ATPase (CDC48 subfamily) [Natronomonas moolapensis 8.8.11]
          Length = 758

 Score =  276 bits (705), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 134/284 (47%), Positives = 185/284 (65%), Gaps = 12/284 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A   + PSAMREV +EVP   W  VGG  + K +L E ++WP  + E F+ +    
Sbjct: 443  DFKDALKGITPSAMREVFVEVPDTTWNSVGGLEDTKERLRETIQWPLDYPEVFETMDMEA 502

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+L++GPPG  KTLMA+AVA+EA  NF+++KGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 503  AKGVLLYGPPGTGKTLMAKAVANEANSNFISIKGPELLNKYVGESEKGVREVFEKARSNA 562

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA TNRPD ID 
Sbjct: 563  PTVVFFDEIDSIAGERGRGMGDSGVGERVVSQLLTELDGLEELEDVVVIATTNRPDLIDS 622

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R  I  +H R  P + DV++ E+A  ++G  GADI  + 
Sbjct: 623  ALLRPGRLDRHVHVPVPDEAARRAILDVHTRDKPLADDVDLDEVASDTDGYVGADIEAVA 682

Query: 989  REAAISAIEENLDA------------SRITMQHLKTAIRHVQPS 1020
            REA+++A  E +++             RIT +H + A+  V PS
Sbjct: 683  REASMAATREFINSVDPEEAAQSVGNVRITREHFEAALEEVGPS 726



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 165/266 (62%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTLMA+AV
Sbjct: 191  PSVTYEDIGGLVQELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAV 250

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            ASE   +F  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DEID +A  RG+ S 
Sbjct: 251  ASEIDAHFSNISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKRGETSG 310

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V  RV++QLL  +DGL  R +V VI ATNR D +DPAL R GRFDR + +G P++  
Sbjct: 311  --DVERRVVAQLLSLMDGLDDRGDVIVIGATNRVDALDPALRRGGRFDREIEIGVPDKEG 368

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R+EI ++H R +P    +++ + A  + G  GAD++ + +EAA++A+             
Sbjct: 369  RKEILQVHTRGMPLVDGIDLDQYAENTHGFVGADLASLAKEAAMNALRRIRPELDLEQDE 428

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L++  +T    K A++ + PS
Sbjct: 429  IDAEILESMSVTRGDFKDALKGITPS 454



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/236 (45%), Positives = 150/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A +   +
Sbjct: 198 IGGLVQELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLMAKAVASEIDAH 257

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              ++GPE++S+ YGESE+ L EVF+ A ++APA+VFIDE+D+IAP R +   ++ +R+V
Sbjct: 258 FSNISGPEIMSKYYGESEEQLREVFEEAEENAPAIVFIDEIDSIAPKRGETSGDVERRVV 317

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V+VI ATNR D+++PALRR GR DREIEI               V
Sbjct: 318 AQLLSLMDGLDDRGDVIVIGATNRVDALDPALRRGGRFDREIEI--------------GV 363

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L+D  +++  +  THGFVGADLA+L  EAA+  LRR
Sbjct: 364 PDKEGRKEILQVHTRGM--PLVDGIDLDQYAENTHGFVGADLASLAKEAAMNALRR 417



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 153/299 (51%), Gaps = 26/299 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      L++ I           ++ +   KGVLL+GPPGTGKT +A+  A+++  N
Sbjct: 471 VGGLEDTKERLRETIQWPLDYPEVFETMDMEAAKGVLLYGPPGTGKTLMAKAVANEANSN 530

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             ++ GPE++++  GESE+ + EVF+ A  +AP VVF DE+D+IA  R  G  +  + +R
Sbjct: 531 FISIKGPELLNKYVGESEKGVREVFEKARSNAPTVVFFDEIDSIAGERGRGMGDSGVGER 590

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+VIA TNRPD I+ AL RPGRLDR + +              
Sbjct: 591 VVSQLLTELDGLEELEDVVVIATTNRPDLIDSALLRPGRLDRHVHV-------------- 636

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYS 648
            VP  A R  IL   +   +  L D  +++ ++  T G+VGAD+ A+  EA++   R + 
Sbjct: 637 PVPDEAARRAILD--VHTRDKPLADDVDLDEVASDTDGYVGADIEAVAREASMAATREFI 694

Query: 649 KIQTSSDVLHSTGTLFEFEGHSDTMLQ------DSDCSRNITESSRDCLDSASPCTSDL 701
                 +   S G +     H +  L+      D D  +   E   +   S  P   D+
Sbjct: 695 NSVDPEEAAQSVGNVRITREHFEAALEEVGPSVDDDTRKRYEELEDELGPSDEPNEPDV 753


>gi|381145559|gb|AFF59215.1| cell division cycle protein 48 [Camellia sinensis]
          Length = 807

 Score =  275 bits (704), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 129/253 (50%), Positives = 174/253 (68%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F  A     PSA+RE ++EVP V WEDVGG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FHTALGTSNPSALRETVVEVPNVNWEDVGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV +R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPISKDVELRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 696  QRACKYAIRENIE 708



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 162/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  S DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLSEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H  TA+    PS + 
Sbjct: 442  DAEILNSMAVTNEHFHTALGTSNPSALR 469



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ S  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLS-EDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPIS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D E+  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVELRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|359416326|ref|ZP_09208666.1| ATPase AAA [Candidatus Haloredivivus sp. G17]
 gi|358033317|gb|EHK01882.1| ATPase AAA [Candidatus Haloredivivus sp. G17]
          Length = 754

 Score =  275 bits (704), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 137/278 (49%), Positives = 186/278 (66%)

Query: 757  VRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFG 816
            V PS MREV++EVPKV WEDVGG  + K +L E VEWPQK+ E F+ +G   P GI+++G
Sbjct: 461  VEPSQMREVMVEVPKVSWEDVGGLNDTKDRLKEMVEWPQKYPERFENMGIEVPKGIMLYG 520

Query: 817  PPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 876
             PG  KTL+A+A+A+EA  NF+++KGPE+FSK+VGESE+AVR +F KAR  AP I+F DE
Sbjct: 521  MPGTGKTLLAKAIANEANANFISIKGPEVFSKYVGESEEAVREVFKKARQVAPCILFIDE 580

Query: 877  IDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 936
            ID +A  RG  S    V DRV++QLL ELDG+     VTVIAATNRPD IDPA+ RPGR 
Sbjct: 581  IDAIAPRRGGGSSDSGVGDRVVNQLLTELDGIESLEGVTVIAATNRPDMIDPAITRPGRI 640

Query: 937  DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 996
            DR + V  P    R +I  +H R +P + DVN+  +A  +E   G+DI  +CREAA+ ++
Sbjct: 641  DRSVEVEVPGVEARRKILEVHTRDMPLADDVNLDSVAEKTEHFVGSDIESLCREAAMISL 700

Query: 997  EENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
             E+ +   ++M   + A+  V P+     +EL  +  R
Sbjct: 701  REDPEDEEVSMDEFEKALSEVNPTANEDNRELYEQMTR 738



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/347 (39%), Positives = 196/347 (56%), Gaps = 24/347 (6%)

Query: 692  DSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFE 751
            D  SP   D P S               ADNF     D+   +  ++    +K+   +  
Sbjct: 132  DIISPGNQDKPRSFFDDMF------ESAADNFSFSFGDTKLTVVKTKPKGPVKI--TEAT 183

Query: 752  KARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTG 811
            +  MK R  +  +  ++VP+V +ED+GG      Q+ E +E P KH E F+++G   P+G
Sbjct: 184  QIEMKERAVSEPQQQVKVPEVTYEDIGGLDNEVQQVREMIELPLKHPEVFQQLGIDAPSG 243

Query: 812  ILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSI 871
            +L+ GPPG  KTL+A+AVA+EA  NFL++ GPE+ SK+ GESEK +R  F +AR   PSI
Sbjct: 244  VLLQGPPGTGKTLLAKAVANEADANFLSIDGPEIMSKYYGESEKQLREKFEEAREGEPSI 303

Query: 872  IFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALL 931
            IF DEID +A  RG    G  V  RV++ LL E+DGL  R NV VIAATNR + IDPAL 
Sbjct: 304  IFIDEIDAIAPKRG--DAGGEVERRVVATLLSEMDGLESRENVIVIAATNRAEAIDPALR 361

Query: 932  RPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREA 991
            R GRFDR + +G PN   R+EI +IH R +P   D+++ E+A L+ G  GAD+  +C+EA
Sbjct: 362  RGGRFDREIEIGVPNSKGRKEILQIHTRNMPLEEDIDLEEMADLTHGYVGADLEALCKEA 421

Query: 992  AISAIE--------------ENLDASRITMQHLKTAIRHVQPSEIHS 1024
            A+S +               E L+   +    +   +R+V+PS++  
Sbjct: 422  AMSTLRNIIPEIDMDEEIPSEVLEKLIVDRNAMMDGLRNVEPSQMRE 468



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 107/236 (45%), Positives = 148/236 (62%), Gaps = 20/236 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +          LG+    GVLL GPPGTGKT LA+  A+++  N
Sbjct: 209 IGGLDNEVQQVREMIELPLKHPEVFQQLGIDAPSGVLLQGPPGTGKTLLAKAVANEADAN 268

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE+ L E F+ A +  P+++FIDE+DAIAP R D G E+ +R+V
Sbjct: 269 FLSIDGPEIMSKYYGESEKQLREKFEEAREGEPSIIFIDEIDAIAPKRGDAGGEVERRVV 328

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           ATLL+ MDG+   + V+VIAATNR ++I+PALRR GR DREIEI               V
Sbjct: 329 ATLLSEMDGLESRENVIVIAATNRAEAIDPALRRGGRFDREIEI--------------GV 374

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           P+   R EIL      M    L+ +++   MA  THG+VGADL ALC EAA+  LR
Sbjct: 375 PNSKGRKEILQIHTRNMP---LEEDIDLEEMADLTHGYVGADLEALCKEAAMSTLR 427



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/236 (39%), Positives = 138/236 (58%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL+     LK+++           ++G+   KG++L+G PGTGKT LA+  A+++  N
Sbjct: 481 VGGLNDTKDRLKEMVEWPQKYPERFENMGIEVPKGIMLYGMPGTGKTLLAKAIANEANAN 540

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             ++ GPEV S+  GESE+A+ EVF  A Q AP ++FIDE+DAIAP R        +  R
Sbjct: 541 FISIKGPEVFSKYVGESEEAVREVFKKARQVAPCILFIDEIDAIAPRRGGGSSDSGVGDR 600

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V  LL  +DG+   +GV VIAATNRPD I+PA+ RPGR+DR +E++             
Sbjct: 601 VVNQLLTELDGIESLEGVTVIAATNRPDMIDPAITRPGRIDRSVEVE------------- 647

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            VP    R +IL      M  +  D  ++ ++  T  FVG+D+ +LC EAA++ LR
Sbjct: 648 -VPGVEARRKILEVHTRDMPLA-DDVNLDSVAEKTEHFVGSDIESLCREAAMISLR 701


>gi|242039557|ref|XP_002467173.1| hypothetical protein SORBIDRAFT_01g020910 [Sorghum bicolor]
 gi|241921027|gb|EER94171.1| hypothetical protein SORBIDRAFT_01g020910 [Sorghum bicolor]
          Length = 810

 Score =  275 bits (704), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 201/323 (62%), Gaps = 15/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 459  FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 518

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 519  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 578

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 579  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 638

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 639  ALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEIC 698

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++      +  K     ++  E+    E+ A       K+ R   S ++
Sbjct: 699  QRACKYAIRENIEKDIERERRRKDNPEAMEEDEVDEIAEIKAAHFEESMKYAR--RSVSD 756

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+  GS  
Sbjct: 757  ADIRKYQAFAQTLQQSRGFGSEF 779



 Score =  229 bits (583), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 207  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 266

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G
Sbjct: 267  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG 325

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 326  -EVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 384

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DVN+  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 385  LEVLRIHTKNMKLAEDVNLELISKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETI 444

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H KTA+    PS + 
Sbjct: 445  DAEILNSMAVTNDHFKTALGTSNPSALR 472



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 155/239 (64%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 213 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 272

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 273 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 332

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 333 SQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 378

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  D  +E +S  THG+VGADLAALC EAAL C+R    I
Sbjct: 379 PDEVGRLEVLRIHTKNMKLA-EDVNLELISKDTHGYVGADLAALCTEAALQCIREKMDI 436



 Score =  151 bits (381), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 510 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 569

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 570 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 628

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    RL+I  A L     +
Sbjct: 629 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEQSRLQIFKACLRKSPVA 674

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 675 -KDVDLNALAKYTQGFSGADITEICQRACKYAIR 707


>gi|223995345|ref|XP_002287356.1| AAA family cell division control-like protein [Thalassiosira
            pseudonana CCMP1335]
 gi|220976472|gb|EED94799.1| AAA family cell division control-like protein [Thalassiosira
            pseudonana CCMP1335]
          Length = 564

 Score =  275 bits (703), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 143/305 (46%), Positives = 197/305 (64%), Gaps = 14/305 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            A  +E  D E A    +P+A++ V +E+P+V W  +GG  +VK+ L E++E P  H   F
Sbjct: 261  ATGVEYNDLEHAIRITKPTAIKSVAVEIPRVPWSAIGGMDQVKSLLKESIELPLTHPHLF 320

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + +   PP GIL++GPPGCSKTLMARA+A+E  +NFLAVKGPEL SKW+GESE+A+ SLF
Sbjct: 321  EMMQVPPPKGILLYGPPGCSKTLMARAIATEGNMNFLAVKGPELLSKWLGESERALASLF 380

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGL------HQRVNVT 915
             +AR  +P++IFFDE D +A+ RG        SDR++SQLL ELDG+        +  V 
Sbjct: 381  RRARLASPAVIFFDECDAIASKRGGGG--GGGSDRLLSQLLTELDGVTSGGEGGNKSRVV 438

Query: 916  VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELA-- 973
            V+ ATNRPD +DPAL RPGR DR++YVG P+E  R+ IF I ++   C  DV++  LA  
Sbjct: 439  VVGATNRPDVLDPALTRPGRMDRMIYVGLPDENGRKSIFDIGMKGKQCHEDVDVSVLAKD 498

Query: 974  CLSEGCTGADISLICREAAISAIEEN----LDASRITMQHLKTAIRHVQPSEIHSYKELS 1029
             LS+G +GA+I  ICR+AA+ AI E     +DA +I MQHL  +I  ++P          
Sbjct: 499  GLSKGYSGAEIVAICRDAALHAIGEMDDGFIDAPQIRMQHLLRSITDMKPRTTPEMLRFY 558

Query: 1030 AKFQR 1034
              F+R
Sbjct: 559  ESFRR 563



 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 132/241 (54%), Gaps = 26/241 (10%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG+ +  ++LK+ I +  +       + + P KG+LL+GPPG  KT +AR  A +  
Sbjct: 294 SAIGGMDQVKSLLKESIELPLTHPHLFEMMQVPPPKGILLYGPPGCSKTLMARAIATEGN 353

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE++S+  GESE+AL  +F  A  ++PAV+F DE DAIA  R  GG   S R
Sbjct: 354 MNFLAVKGPELLSKWLGESERALASLFRRARLASPAVIFFDECDAIASKRGGGGGGGSDR 413

Query: 530 MVATLLNLMDGVCRTDG--------VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
           +++ LL  +DGV  T G        V+V+ ATNRPD ++PAL RPGR+DR I +      
Sbjct: 414 LLSQLLTELDGV--TSGGEGGNKSRVVVVGATNRPDVLDPALTRPGRMDRMIYV------ 465

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGME-HSLLDSEVEYLSMATHGFVGADLAALCNEAA 640
                    +P    R  I    + G + H  +D  V      + G+ GA++ A+C +AA
Sbjct: 466 --------GLPDENGRKSIFDIGMKGKQCHEDVDVSVLAKDGLSKGYSGAEIVAICRDAA 517

Query: 641 L 641
           L
Sbjct: 518 L 518



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 126/268 (47%), Gaps = 37/268 (13%)

Query: 794  PQKHQEAFKRIGT-RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWV-- 850
            P  H   F + G  RPP G L+FGPPG  K+ +A  +A++        +   +F K V  
Sbjct: 16   PLLHPSLFPKDGPLRPPKGCLVFGPPGVGKSCLAAQIANDFSTGIATTEKHRIFVKSVQC 75

Query: 851  ----------GESEKAVRSLFAKARANAP----SIIFFDEIDGLAAIRGKESDGVSVS-- 894
                      GE+E ++  +F +A+ NA     S++  D++  +   RG    G      
Sbjct: 76   ADILATTTIIGEAENSLTGVFEEAKLNASDSCGSLLILDDVHLICPRRGGLGSGSGGLGV 135

Query: 895  DRVMSQLLVELDGLH--QRVN--------VTVIAATNRPDKIDPALLRPGRFDRLLYVGP 944
            D++   LL  LDG+   + +N        V V+A T  P  +DPAL R GR D  + V  
Sbjct: 136  DQLAGTLLALLDGIGSPEDINTNRKSGGGVVVLAITTDPSLLDPALRRSGRLDVEVEVPV 195

Query: 945  PNETDREEIFRIHLRKIPCS----SDVNIRELACLSEGCTGADISLICREAAIS----AI 996
            P++  R +I R H+  I  +     D +I  LA L++G TGAD  L  +EA  S    ++
Sbjct: 196  PDDKARADILRFHIASISSADSSFGDKDIEALARLAKGFTGADCKLAVKEAVRSNTTRSL 255

Query: 997  EENLDASRITMQHLKTAIRHVQPSEIHS 1024
            E    A+ +    L+ AIR  +P+ I S
Sbjct: 256  ESGKQATGVEYNDLEHAIRITKPTAIKS 283



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 117/260 (45%), Gaps = 49/260 (18%)

Query: 415 GLSKEYAILKDIIISSSVKSTL--SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 472
           GL    + ++D +I   +  +L      LRP KG L+ GPPG GK+ LA   A+D    +
Sbjct: 1   GLDTTLSRIRDTLIPPLLHPSLFPKDGPLRPPKGCLVFGPPGVGKSCLAAQIANDFSTGI 60

Query: 473 FTVNGPEVVSQNY------------GESEQALHEVFD----SASQSAPAVVFIDELDAIA 516
            T     +  ++             GE+E +L  VF+    +AS S  +++ +D++  I 
Sbjct: 61  ATTEKHRIFVKSVQCADILATTTIIGEAENSLTGVFEEAKLNASDSCGSLLILDDVHLIC 120

Query: 517 PARKDGGEELS----QRMVATLLNLMDGVCRTD----------GVLVIAATNRPDSIEPA 562
           P R   G         ++  TLL L+DG+   +          GV+V+A T  P  ++PA
Sbjct: 121 PRRGGLGSGSGGLGVDQLAGTLLALLDGIGSPEDINTNRKSGGGVVVLAITTDPSLLDPA 180

Query: 563 LRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILH---ALLSGMEHSLLDSEVEY 619
           LRR GRLD E+E+               VP    R +IL    A +S  + S  D ++E 
Sbjct: 181 LRRSGRLDVEVEV--------------PVPDDKARADILRFHIASISSADSSFGDKDIEA 226

Query: 620 LSMATHGFVGADLAALCNEA 639
           L+    GF GAD      EA
Sbjct: 227 LARLAKGFTGADCKLAVKEA 246


>gi|328953484|ref|YP_004370818.1| ATPase AAA [Desulfobacca acetoxidans DSM 11109]
 gi|328453808|gb|AEB09637.1| AAA family ATPase, CDC48 subfamily [Desulfobacca acetoxidans DSM
           11109]
          Length = 715

 Score =  275 bits (703), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 134/259 (51%), Positives = 180/259 (69%)

Query: 738 EKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKH 797
           E+   L++ + DF  A  +V  SA+REV +EVP V+WEDVGG REVK +L EAVEWP K+
Sbjct: 419 EQLAQLEVHMDDFLGALREVEASAIREVFVEVPDVRWEDVGGLREVKDRLQEAVEWPLKY 478

Query: 798 QEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 857
              FK+ G +PP GIL+ GPPGC KTL+A+A+A+E+ +NFL+VKGP L SK+VGESE+ V
Sbjct: 479 TYLFKKAGIKPPKGILLTGPPGCGKTLLAKAIATESRVNFLSVKGPALISKYVGESERGV 538

Query: 858 RSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVI 917
           R +F  AR  AP IIF DE + L   RG       VS+RV+SQ L ELDG+ +   V V+
Sbjct: 539 REMFRTARQAAPCIIFLDETEALLPARGAGGSDSHVSERVLSQFLAELDGIEELKGVLVL 598

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNR D +DPA+LRPGRFD ++ +   +  DR EIF +HLR  P +  +N  ELA  +E
Sbjct: 599 GATNRLDMMDPAVLRPGRFDEIITIHLADAEDRREIFAVHLRDKPLAKGINPAELAARTE 658

Query: 978 GCTGADISLICREAAISAI 996
           G +GA+I+ +C +AA+SA+
Sbjct: 659 GLSGAEIAAVCSKAALSAV 677



 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/267 (41%), Positives = 156/267 (58%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +EDVGG +    ++ E +E P ++ E F+R+G   P G+L+ GPPGC KTL+AR +A 
Sbjct: 180  VSYEDVGGLKPQLQRIREMIELPLRYPELFERLGIDAPKGVLLHGPPGCGKTLIARTIAH 239

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   NF +V GPE+  K+ GESE  +R +F +A    PSIIF DEID +A  R K     
Sbjct: 240  ETEANFFSVSGPEVVHKFYGESEAHLRKIFEEASRKGPSIIFMDEIDAIAPRREKVVG-- 297

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL++R NV VIAATN P+ +DPAL RPGRFDR + +  P+   R 
Sbjct: 298  DVEKRVVAQLLALMDGLNKRQNVIVIAATNIPNALDPALRRPGRFDREIAIPIPDRHGRL 357

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            +I  IH R +P S +V++  LA ++ G  GAD+  +CREAA+  +               
Sbjct: 358  DILEIHSRGMPLSENVDMGHLAEITHGFVGADLEALCREAAMICLRRLMPEIDYGLSTIP 417

Query: 998  -ENLDASRITMQHLKTAIRHVQPSEIH 1023
             E L    + M     A+R V+ S I 
Sbjct: 418  YEQLAQLEVHMDDFLGALREVEASAIR 444



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 152/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +          LG+   KGVLLHGPPG GKT +AR  AH++  N
Sbjct: 185 VGGLKPQLQRIREMIELPLRYPELFERLGIDAPKGVLLHGPPGCGKTLIARTIAHETEAN 244

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F+V+GPEVV + YGESE  L ++F+ AS+  P+++F+DE+DAIAP R+    ++ +R+V
Sbjct: 245 FFSVSGPEVVHKFYGESEAHLRKIFEEASRKGPSIIFMDEIDAIAPRREKVVGDVEKRVV 304

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+ +   V+VIAATN P++++PALRRPGR DREI I               +
Sbjct: 305 AQLLALMDGLNKRQNVIVIAATNIPNALDPALRRPGRFDREIAI--------------PI 350

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    RL+IL     GM  S  + ++ +L+  THGFVGADL ALC EAA++CLRR
Sbjct: 351 PDRHGRLDILEIHSRGMPLS-ENVDMGHLAEITHGFVGADLEALCREAAMICLRR 404



 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 130/217 (59%), Gaps = 33/217 (15%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G++P KG+LL GPPG GKT LA+  A +S VN  +V GP ++S+  GESE+ + E+F +A
Sbjct: 486 GIKPPKGILLTGPPGCGKTLLAKAIATESRVNFLSVKGPALISKYVGESERGVREMFRTA 545

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            Q+AP ++F+DE +A+ PAR  GG +  +S+R+++  L  +DG+    GVLV+ ATNR D
Sbjct: 546 RQAAPCIIFLDETEALLPARGAGGSDSHVSERVLSQFLAELDGIEELKGVLVLGATNRLD 605

Query: 558 SIEPALRRPGRLDREIEI------DMSFLFSL-LKNSPAAVP-SPAQRLEILHALLSGME 609
            ++PA+ RPGR D  I I      D   +F++ L++ P A   +PA+             
Sbjct: 606 MMDPAVLRPGRFDEIITIHLADAEDRREIFAVHLRDKPLAKGINPAE------------- 652

Query: 610 HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
                     L+  T G  GA++AA+C++AAL  +RR
Sbjct: 653 ----------LAARTEGLSGAEIAAVCSKAALSAVRR 679


>gi|351727028|ref|NP_001235099.1| cell division cycle protein 48 homolog [Glycine max]
 gi|1705678|sp|P54774.1|CDC48_SOYBN RecName: Full=Cell division cycle protein 48 homolog; AltName:
            Full=Valosin-containing protein homolog; Short=VCP
 gi|862480|gb|AAA80587.1| valosin-containing protein [Glycine max]
 gi|86212372|gb|ABC87759.1| plamsma membrane-associated AAA-ATPase [Glycine max]
          Length = 807

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/349 (42%), Positives = 212/349 (60%), Gaps = 28/349 (8%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + +V++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD-------ASRITMQHLKTAIRHVQPSEIH-SYKELSAKFQRLVHSNA 1040
            + A   AI EN++        SR   + +       + +EI  ++ E S KF R   S +
Sbjct: 696  QRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFAR--RSVS 753

Query: 1041 EADESGYQ-----LRPSKSIGSNMWTLIKSISLFLCRFPAGLSQSESGS 1084
            +AD   YQ     L+ S+  GS              RFP    ++ +GS
Sbjct: 754  DADIRKYQAFAQTLQQSRGFGSEF------------RFPESGDRTTTGS 790



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  S DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEVLNSMAVTNEHFQTALGTSNPSALR 469



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ S  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLS-DDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/216 (40%), Positives = 118/216 (54%), Gaps = 24/216 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDEDSRHQIFKACL---RKS 668

Query: 612 LLDSEVEYLSMATH--GFVGADLAALCNEAALVCLR 645
            +   V+  ++A H  GF GAD+  +C  A    +R
Sbjct: 669 PIAKNVDLRALARHTQGFSGADITEICQRACKYAIR 704


>gi|110289141|gb|AAP53974.2| Cell division cycle protein 48, putative, expressed [Oryza sativa
            Japonica Group]
 gi|222612898|gb|EEE51030.1| hypothetical protein OsJ_31677 [Oryza sativa Japonica Group]
          Length = 808

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 201/323 (62%), Gaps = 15/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 458  FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 517

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 518  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 577

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 578  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 637

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 638  ALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEIC 697

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++      +  K     ++  E+    E+ A       K+ R   S ++
Sbjct: 698  QRACKYAIRENIEKDIERERRSKENPEAMEEDEVDDIAEIKAAHFEESMKYAR--RSVSD 755

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+  GS  
Sbjct: 756  ADIRKYQAFAQTLQQSRGFGSEF 778



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 206  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 265

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G
Sbjct: 266  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG 324

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 325  -EVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 383

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 384  LEVLRIHTKNMKLAEDVDLELIAKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETI 443

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H KTA+    PS + 
Sbjct: 444  DAEILNSMAVTNDHFKTALGTSNPSALR 471



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/239 (43%), Positives = 156/239 (65%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 212 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 271

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 272 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 331

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 332 SQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 377

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R    I
Sbjct: 378 PDEVGRLEVLRIHTKNMKLA-EDVDLELIAKDTHGYVGADLAALCTEAALQCIREKMDI 435



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 509 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 568

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 569 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 627

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    RL+I  A L     +
Sbjct: 628 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEQSRLQIFKACLRKSPVA 673

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 674 -KDVDLNALAKYTQGFSGADITEICQRACKYAIR 706


>gi|161527613|ref|YP_001581439.1| ATPase AAA [Nitrosopumilus maritimus SCM1]
 gi|160338914|gb|ABX12001.1| AAA family ATPase, CDC48 subfamily [Nitrosopumilus maritimus SCM1]
          Length = 722

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 136/300 (45%), Positives = 200/300 (66%), Gaps = 15/300 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+KA ++V PS MREV +E P VKW++VGG  +VK +L EAVEWP K+   + ++G   
Sbjct: 424  DFQKALIEVTPSGMREVFIENPDVKWDEVGGLEDVKRELQEAVEWPMKYPALYDKLGHSM 483

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+ GP G  KTL+A+AVA+++  NF++V+GPEL SKWVGESE+ +R +F +AR +A
Sbjct: 484  PRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFKRARQSA 543

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P ++FFDEID +A IRG   +  +V++RV+SQLL ELDG+     V V+AATNR D IDP
Sbjct: 544  PCVVFFDEIDSIAPIRGAGGE-TAVTERVVSQLLTELDGMENMHGVVVLAATNRADMIDP 602

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD+++ V  P++  R+ I  I+  KIP   DV++ ++A +++G +GAD S I 
Sbjct: 603  ALLRPGRFDKIIQVPNPDKDSRKRILEINAEKIPMGDDVDMEKIAEITDGMSGADTSSIA 662

Query: 989  REAAISAIEENLDA-------------SRITMQHLKTAIRHV-QPSEIHSYKELSAKFQR 1034
              A    I E LD              +++TM+H + A++ V +  ++   ++L A + R
Sbjct: 663  NTAVSLVIHEFLDKHPDVKDVEKSSIEAKVTMKHFEEAVKKVREQKDLKMGEKLVASYYR 722



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 115/272 (42%), Positives = 171/272 (62%), Gaps = 17/272 (6%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E +  VP+V +ED+GG  +   ++ E +E P +H E F+++G   P G+L++GPPG  KT
Sbjct: 166  ETLRGVPQVTYEDIGGLTDEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKT 225

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+AVA+E+  +F+++ GPE+ SK+ GESE  +R +F +AR  APSIIF DEID +A  
Sbjct: 226  LLAKAVANESNAHFISISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPK 285

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            R +E  G  V  RV+SQ+L  +DGL  R  V VI+ATNRP+ IDPAL RPGRFDR + + 
Sbjct: 286  R-EEVTG-EVERRVVSQMLSLMDGLEARGKVIVISATNRPNAIDPALRRPGRFDREIEIK 343

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------ 997
             P++  R++I  IH R +P S DVN+ +++ +S G  GAD+  +C+EAA+  +       
Sbjct: 344  VPDKKGRKDILAIHSRNMPLSDDVNVDKISAISHGYVGADLEYLCKEAAMKCLRRLLPIL 403

Query: 998  ---------ENLDASRITMQHLKTAIRHVQPS 1020
                     E LD   +  +  + A+  V PS
Sbjct: 404  NLEEEKIPPETLDKLIVNHEDFQKALIEVTPS 435



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL+ E   ++++I +          LG+   KGVLL+GPPGTGKT LA+  A++S  +
Sbjct: 179 IGGLTDEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKTLLAKAVANESNAH 238

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE  L E+F  A + AP+++F+DE+D+IAP R++   E+ +R+V
Sbjct: 239 FISISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPKREEVTGEVERRVV 298

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + +L+LMDG+     V+VI+ATNRP++I+PALRRPGR DREIEI               V
Sbjct: 299 SQMLSLMDGLEARGKVIVISATNRPNAIDPALRRPGRFDREIEI--------------KV 344

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R +IL      M  S  D  V+ +S  +HG+VGADL  LC EAA+ CLRR
Sbjct: 345 PDKKGRKDILAIHSRNMPLS-DDVNVDKISAISHGYVGADLEYLCKEAAMKCLRR 398



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 151/289 (52%), Gaps = 36/289 (12%)

Query: 364 NAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA--TVEQDISKLGGLSKEYA 421
           +  ++NHE   +    +      +RE  + N  +++  V     V++++ +      +Y 
Sbjct: 416 DKLIVNHED--FQKALIEVTPSGMREVFIENPDVKWDEVGGLEDVKRELQEAVEWPMKYP 473

Query: 422 ILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
            L D             LG    +G+LLHGP GTGKT LA+  A  S  N  +V GPE++
Sbjct: 474 ALYD------------KLGHSMPRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELL 521

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE-LSQRMVATLLNLMDG 540
           S+  GESE+ + E+F  A QSAP VVF DE+D+IAP R  GGE  +++R+V+ LL  +DG
Sbjct: 522 SKWVGESERGIREIFKRARQSAPCVVFFDEIDSIAPIRGAGGETAVTERVVSQLLTELDG 581

Query: 541 VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RL 598
           +    GV+V+AATNR D I+PAL RPGR D+ I+                VP+P +  R 
Sbjct: 582 MENMHGVVVLAATNRADMIDPALLRPGRFDKIIQ----------------VPNPDKDSRK 625

Query: 599 EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            IL      +     D ++E ++  T G  GAD +++ N A  + +  +
Sbjct: 626 RILEINAEKIPMG-DDVDMEKIAEITDGMSGADTSSIANTAVSLVIHEF 673


>gi|448718534|ref|ZP_21703073.1| ATPase AAA [Halobiforma nitratireducens JCM 10879]
 gi|445784332|gb|EMA35148.1| ATPase AAA [Halobiforma nitratireducens JCM 10879]
          Length = 770

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 140/307 (45%), Positives = 193/307 (62%), Gaps = 16/307 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            A+++   DF++A   V PSA+REV +EVP V W+ VGG  + K +L E ++WP ++   F
Sbjct: 460  AIEVTEDDFQRAMSSVDPSALREVFVEVPDVSWDHVGGLEDTKRRLRETIQWPLEYGPVF 519

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
              +      G+L++GPPG  KTL+A+AVASEA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 520  DELHLTAANGVLLYGPPGTGKTLLAKAVASEAQSNFISIKGPELLNKYVGESEKGVREVF 579

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR+NAP++IFFDEID +AA R    D   V +RV+SQLL ELDGL +  +V VIA +N
Sbjct: 580  EKARSNAPAVIFFDEIDAIAAERSSGGDSSGVQERVVSQLLTELDGLEELEDVIVIATSN 639

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGRFDR ++V  P++  R EIF +H        +V +  LA  ++G  G
Sbjct: 640  RPDLIDDALLRPGRFDRQIHVPIPDDQARREIFDVHTTHRSIGDEVELARLAGRTQGHVG 699

Query: 982  ADISLICREAAISA------------IEENLDASRITMQHLKTAIRHVQPS----EIHSY 1025
            ADI  +CREAA+ A            IE+++    +T  H   AI+   PS        Y
Sbjct: 700  ADIEAVCREAAMEAARQFVDEKTPADIEDDVGTITVTADHFDHAIKATSPSVDDATKRHY 759

Query: 1026 KELSAKF 1032
            +EL  +F
Sbjct: 760  EELERQF 766



 Score =  211 bits (537), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 162/266 (60%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG  +   Q+ E +E P ++ E F+++G  PP G+L+ GPPG  KT++A+AV
Sbjct: 215  PDVTYEDIGGVDDELEQVREMIELPMRYPELFQQLGIEPPKGVLLHGPPGTGKTMIAKAV 274

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E    F  + GPE+ S++ GESE+ +RS+F +A   +P+++F DEID +A  R +E+ 
Sbjct: 275  ANEIDAFFTDISGPEIMSRYYGESEEQLRSVFEEATEQSPAVVFIDEIDSIAPER-EETS 333

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  R+++QLL  LDGL +R  V VI ATNR D IDPAL R GRFDR + VG P++  
Sbjct: 334  G-DVERRIVAQLLSLLDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEVGVPDKDG 392

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R EI  +H R +P S DV++ + A  + G  GADI  + +EAA+ A+             
Sbjct: 393  RREILDVHTRGMPISEDVDLEKYAADTHGFVGADIEQLAKEAAMRALRRVRPDLDLESDT 452

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L+A  +T    + A+  V PS
Sbjct: 453  IDAEVLEAIEVTEDDFQRAMSSVDPS 478



 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 146/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+  E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++    
Sbjct: 222 IGGVDDELEQVREMIELPMRYPELFQQLGIEPPKGVLLHGPPGTGKTMIAKAVANEIDAF 281

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              ++GPE++S+ YGESE+ L  VF+ A++ +PAVVFIDE+D+IAP R++   ++ +R+V
Sbjct: 282 FTDISGPEIMSRYYGESEEQLRSVFEEATEQSPAVVFIDEIDSIAPEREETSGDVERRIV 341

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+L+DG+     V+VI ATNR D+I+PALRR GR DREIE+               V
Sbjct: 342 AQLLSLLDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEV--------------GV 387

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  S  D ++E  +  THGFVGAD+  L  EAA+  LRR
Sbjct: 388 PDKDGRREILDVHTRGMPIS-EDVDLEKYAADTHGFVGADIEQLAKEAAMRALRR 441



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 138/244 (56%), Gaps = 21/244 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
              L L    GVLL+GPPGTGKT LA+  A ++  N  ++ GPE++++  GESE+ + EV
Sbjct: 519 FDELHLTAANGVLLYGPPGTGKTLLAKAVASEAQSNFISIKGPELLNKYVGESEKGVREV 578

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F+ A  +APAV+F DE+DAIA  R  GG+   + +R+V+ LL  +DG+   + V+VIA +
Sbjct: 579 FEKARSNAPAVIFFDEIDAIAAERSSGGDSSGVQERVVSQLLTELDGLEELEDVIVIATS 638

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+ AL RPGR DR+I +               +P    R EI     +   H  +
Sbjct: 639 NRPDLIDDALLRPGRFDRQIHV--------------PIPDDQARREIFDVHTT---HRSI 681

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSD 671
             EVE   +A  T G VGAD+ A+C EAA+   R++   +T +D+    GT+     H D
Sbjct: 682 GDEVELARLAGRTQGHVGADIEAVCREAAMEAARQFVDEKTPADIEDDVGTITVTADHFD 741

Query: 672 TMLQ 675
             ++
Sbjct: 742 HAIK 745


>gi|167383517|ref|XP_001736564.1| transitional endoplasmic reticulum ATPase [Entamoeba dispar SAW760]
 gi|165900980|gb|EDR27180.1| transitional endoplasmic reticulum ATPase, putative [Entamoeba
           dispar SAW760]
          Length = 804

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 126/257 (49%), Positives = 179/257 (69%)

Query: 742 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
           +L + +  F  A+ KV P+++R+V++EVP VKWED+GG  + K++L E V+WP  H E F
Sbjct: 441 SLVVTMEHFRTAQQKVNPASIRDVVVEVPNVKWEDIGGLEQTKSELKEIVQWPVLHPELF 500

Query: 802 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
           K+ G  P  G+L +GPPGC KT+MA+AVA+E   NF++VKGPEL + W GESE  VR++F
Sbjct: 501 KQYGQPPSRGVLFYGPPGCGKTMMAKAVANECQANFISVKGPELLTMWFGESEANVRNIF 560

Query: 862 AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            KAR  AP ++FFDE+D +A  RG  +     SDRV++QLL E+DG+     V +I ATN
Sbjct: 561 DKARGAAPCVLFFDELDSIAQSRGANNGDSGASDRVINQLLTEMDGMSSAKTVFIIGATN 620

Query: 922 RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
           RPD IDPAL+RPGR D+L+Y+  P+   R  + + +LRK P + DVN+R++A  +EG +G
Sbjct: 621 RPDIIDPALMRPGRLDQLIYIPLPDLEARVGVLQANLRKSPVAPDVNLRDIANATEGFSG 680

Query: 982 ADISLICREAAISAIEE 998
           AD++ IC+ A   AI E
Sbjct: 681 ADLTAICQRAVKLAIRE 697



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/267 (45%), Positives = 166/267 (62%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + ++D+GG R+   ++ E VE P +H + FK IG +PP GIL++GPPGC KT++ARA+A+
Sbjct: 198  IGYDDIGGCRQQLNKIREMVELPLRHPQLFKNIGIKPPRGILLYGPPGCGKTMIARAIAN 257

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DEID +A  R K   G 
Sbjct: 258  ETGAFFFLINGPEIMSKMAGESESNLRRAFEEAEKNSPAIIFIDEIDSIAPKRDKS--GG 315

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV+SQLL  +DGL  R  V VIAATNRP+ ID AL R GRFDR + +G P+   R 
Sbjct: 316  EVERRVVSQLLTLMDGLKARSQVIVIAATNRPNTIDVALRRFGRFDREIDLGIPDTEGRR 375

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN----------LD 1001
            EI +IH +K+  + DV++  LA  + G  GADI+ +C EAA+  I E           +D
Sbjct: 376  EILQIHTKKMKIADDVDLDVLANETHGMVGADIAQLCTEAAMLCIREKIDQIDWDDDTID 435

Query: 1002 ASRI-----TMQHLKTAIRHVQPSEIH 1023
            AS I     TM+H +TA + V P+ I 
Sbjct: 436  ASLIESLVVTMEHFRTAQQKVNPASIR 462



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 145/226 (64%), Gaps = 16/226 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             ++G++P +G+LL+GPPG GKT +AR  A+++G   F +NGPE++S+  GESE  L   
Sbjct: 227 FKNIGIKPPRGILLYGPPGCGKTMIARAIANETGAFFFLINGPEIMSKMAGESESNLRRA 286

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A +++PA++FIDE+D+IAP R   G E+ +R+V+ LL LMDG+     V+VIAATNR
Sbjct: 287 FEEAEKNSPAIIFIDEIDSIAPKRDKSGGEVERRVVSQLLTLMDGLKARSQVIVIAATNR 346

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P++I+ ALRR GR DREI++               +P    R EIL      M+ +  D 
Sbjct: 347 PNTIDVALRRFGRFDREIDL--------------GIPDTEGRREILQIHTKKMKIA-DDV 391

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLR-RYSKIQTSSDVLHST 660
           +++ L+  THG VGAD+A LC EAA++C+R +  +I    D + ++
Sbjct: 392 DLDVLANETHGMVGADIAQLCTEAAMLCIREKIDQIDWDDDTIDAS 437



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 137/248 (55%), Gaps = 22/248 (8%)

Query: 413 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +  + LK+I+    +   L    G  P++GVL +GPPG GKT +A+  A++   N
Sbjct: 476 IGGLEQTKSELKEIVQWPVLHPELFKQYGQPPSRGVLFYGPPGCGKTMMAKAVANECQAN 535

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQR 529
             +V GPE+++  +GESE  +  +FD A  +AP V+F DELD+IA +R   +G    S R
Sbjct: 536 FISVKGPELLTMWFGESEANVRNIFDKARGAAPCVLFFDELDSIAQSRGANNGDSGASDR 595

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           ++  LL  MDG+     V +I ATNRPD I+PAL RPGRLD+ I I              
Sbjct: 596 VINQLLTEMDGMSSAKTVFIIGATNRPDIIDPALMRPGRLDQLIYI-------------- 641

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV----CLR 645
            +P    R+ +L A L     +  D  +  ++ AT GF GADL A+C  A  +    C++
Sbjct: 642 PLPDLEARVGVLQANLRKSPVA-PDVNLRDIANATEGFSGADLTAICQRAVKLAIRECIK 700

Query: 646 RYSKIQTS 653
           +  +IQ S
Sbjct: 701 KEIEIQES 708


>gi|242014230|ref|XP_002427794.1| spermatogenesis associated factor, putative [Pediculus humanus
            corporis]
 gi|212512263|gb|EEB15056.1| spermatogenesis associated factor, putative [Pediculus humanus
            corporis]
          Length = 446

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 129/271 (47%), Positives = 184/271 (67%), Gaps = 37/271 (13%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DFE A  KV+PSAM+E+++++P V+WED+GG  ++K +L + VEWP KH+E+F ++G   
Sbjct: 201  DFEWALNKVKPSAMKEIMVDIPNVRWEDIGGLEDLKLKLRQCVEWPLKHKESFNKLGITA 260

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+LMFGPPGCSKT++A+A+A+E+ LNF++VKGPELF+KWVGESE+AVR++F KAR NA
Sbjct: 261  PKGLLMFGPPGCSKTMIAKALATESKLNFISVKGPELFNKWVGESERAVRNIFRKARQNA 320

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PSIIF DE+D +   R   S G +V +RV++Q+L+E+DG+    NVTVIAATNR D+ID 
Sbjct: 321  PSIIFIDELDAIGGERNL-SSGSNVQERVLAQILIEMDGVVPLDNVTVIAATNRLDRIDS 379

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+                                     ++G +GA+I  +C
Sbjct: 380  ALLRPGRLDQ------------------------------------STQGYSGAEIVAVC 403

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQP 1019
            REAA+ A+EEN +A +++  H   A+  + P
Sbjct: 404  REAALKALEENFNADKVSKNHFLKALEIILP 434



 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 66/140 (47%), Positives = 93/140 (66%), Gaps = 1/140 (0%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K + + LG+   KG+L+ GPPG  KT +A+  A +S +N  +V GPE+ ++  GESE+A+
Sbjct: 250 KESFNKLGITAPKGLLMFGPPGCSKTMIAKALATESKLNFISVKGPELFNKWVGESERAV 309

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
             +F  A Q+AP+++FIDELDAI   R    G  + +R++A +L  MDGV   D V VIA
Sbjct: 310 RNIFRKARQNAPSIIFIDELDAIGGERNLSSGSNVQERVLAQILIEMDGVVPLDNVTVIA 369

Query: 552 ATNRPDSIEPALRRPGRLDR 571
           ATNR D I+ AL RPGRLD+
Sbjct: 370 ATNRLDRIDSALLRPGRLDQ 389



 Score =  120 bits (302), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 120/211 (56%), Gaps = 16/211 (7%)

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           KG+L+HGP G GK+SL  L +    ++   ++  ++ S   GE+E+ LH  F+ A + AP
Sbjct: 3   KGILIHGPNGCGKSSLMELISEYFSISTIKIDCSKIFSAISGETEKELHGSFERAKKKAP 62

Query: 505 AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTD-GVLVIAATNRPDSIEPAL 563
           +++ ID+L  +            +R++ATL  L+D +   +  ++V+AAT++   I+  L
Sbjct: 63  SIILIDDLHLLCSTTNSSSYH-EKRIIATLAFLIDQLSNLNLPIVVLAATSKIHQIDKLL 121

Query: 564 RRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA 623
           R   R  +E+EI               VP+ +QR EIL+ LL  + H+L++S+V+ ++ +
Sbjct: 122 RSSSRFGKEVEI--------------TVPTNSQRFEILNILLLNVNHNLVESDVKTVADS 167

Query: 624 THGFVGADLAALCNEAALVCLRRYSKIQTSS 654
           THGFVGADL +L ++A L   +  +K  T S
Sbjct: 168 THGFVGADLLSLVSQAMLRNYKTENKTGTVS 198



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 5/212 (2%)

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            GIL+ GP GC K+ +   ++    ++ + +   ++FS   GE+EK +   F +A+  APS
Sbjct: 4    GILIHGPNGCGKSSLMELISEYFSISTIKIDCSKIFSAISGETEKELHGSFERAKKKAPS 63

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPA 929
            II  D++  L +     S       R+++ L   +D L +  + + V+AAT++  +ID  
Sbjct: 64   IILIDDLHLLCSTTNSSSYH---EKRIIATLAFLIDQLSNLNLPIVVLAATSKIHQIDKL 120

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLIC 988
            L    RF + + +  P  + R EI  I L  +  +  + +++ +A  + G  GAD+  + 
Sbjct: 121  LRSSSRFGKEVEITVPTNSQRFEILNILLLNVNHNLVESDVKTVADSTHGFVGADLLSLV 180

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
             +A +   +       ++    + A+  V+PS
Sbjct: 181  SQAMLRNYKTENKTGTVSANDFEWALNKVKPS 212


>gi|407461602|ref|YP_006772919.1| ATPase AAA [Candidatus Nitrosopumilus koreensis AR1]
 gi|407045224|gb|AFS79977.1| ATPase AAA [Candidatus Nitrosopumilus koreensis AR1]
          Length = 722

 Score =  275 bits (702), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 200/300 (66%), Gaps = 15/300 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+KA ++V PS MREV +E P VKW++VGG  +VK +L EAVEWP K+   + ++G   
Sbjct: 424  DFQKALIEVTPSGMREVFIENPDVKWDEVGGLEDVKRELQEAVEWPMKYPALYDKLGHNM 483

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+ GP G  KTL+A+AVA+++  NF++V+GPEL SKWVGESE+ +R +F +AR +A
Sbjct: 484  PRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFKRARQSA 543

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P ++FFDEID +A IRG   +  +V++RV+SQLL ELDG+     V V+AATNR D IDP
Sbjct: 544  PCVVFFDEIDSIAPIRGAGGE-TAVTERVVSQLLTELDGMENMHGVVVLAATNRADMIDP 602

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD+++ V  P++  R+ I  I+  KIP   DV++ ++A +++G +GAD + I 
Sbjct: 603  ALLRPGRFDKIIQVPNPDKDSRKRILEINAEKIPMGEDVDLEKIAEITDGMSGADAASIA 662

Query: 989  REAAISAIEENLDA-------------SRITMQHLKTAIRHV-QPSEIHSYKELSAKFQR 1034
              A    I E LD              +++TM+H + A++ V +  ++   ++L A + R
Sbjct: 663  NTAVSLVIHEYLDKHPDVKDVEKNSIEAKVTMKHFEEAVKKVREQKDLKMGEKLVASYYR 722



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 116/272 (42%), Positives = 171/272 (62%), Gaps = 17/272 (6%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E +  VP+V +ED+GG  +   ++ E +E P +H E F+++G   P G+L++GPPG  KT
Sbjct: 166  ETLRGVPQVTYEDIGGLTDEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKT 225

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+AVA+E+  +F+++ GPE+ SK+ GESE  +R +F +AR  APSIIF DEID +A  
Sbjct: 226  LLAKAVANESNAHFISISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPK 285

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            R +E  G  V  RV+SQ+L  +DGL  R  V VI+ATNRP+ IDPAL RPGRFDR + + 
Sbjct: 286  R-EEVTG-EVERRVVSQMLSLMDGLEARGKVIVISATNRPNAIDPALRRPGRFDREIEIK 343

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------ 997
             P++  R++I  IH R +P S DVNI +++ +S G  GAD+  +C+EAA+  +       
Sbjct: 344  VPDKKGRKDILAIHSRNMPLSDDVNIDKISAVSHGYVGADLEYLCKEAAMKCLRRLLPIL 403

Query: 998  ---------ENLDASRITMQHLKTAIRHVQPS 1020
                     E LD   +  +  + A+  V PS
Sbjct: 404  NLEEEKIPPETLDKLIVNHEDFQKALIEVTPS 435



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL+ E   ++++I +          LG+   KGVLL+GPPGTGKT LA+  A++S  +
Sbjct: 179 IGGLTDEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKTLLAKAVANESNAH 238

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE  L E+F  A + AP+++F+DE+D+IAP R++   E+ +R+V
Sbjct: 239 FISISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPKREEVTGEVERRVV 298

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + +L+LMDG+     V+VI+ATNRP++I+PALRRPGR DREIEI               V
Sbjct: 299 SQMLSLMDGLEARGKVIVISATNRPNAIDPALRRPGRFDREIEI--------------KV 344

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R +IL      M  S  D  ++ +S  +HG+VGADL  LC EAA+ CLRR
Sbjct: 345 PDKKGRKDILAIHSRNMPLS-DDVNIDKISAVSHGYVGADLEYLCKEAAMKCLRR 398



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 151/289 (52%), Gaps = 36/289 (12%)

Query: 364 NAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA--TVEQDISKLGGLSKEYA 421
           +  ++NHE   +    +      +RE  + N  +++  V     V++++ +      +Y 
Sbjct: 416 DKLIVNHED--FQKALIEVTPSGMREVFIENPDVKWDEVGGLEDVKRELQEAVEWPMKYP 473

Query: 422 ILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
            L D             LG    +G+LLHGP GTGKT LA+  A  S  N  +V GPE++
Sbjct: 474 ALYD------------KLGHNMPRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELL 521

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE-LSQRMVATLLNLMDG 540
           S+  GESE+ + E+F  A QSAP VVF DE+D+IAP R  GGE  +++R+V+ LL  +DG
Sbjct: 522 SKWVGESERGIREIFKRARQSAPCVVFFDEIDSIAPIRGAGGETAVTERVVSQLLTELDG 581

Query: 541 VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQ--RL 598
           +    GV+V+AATNR D I+PAL RPGR D+ I+                VP+P +  R 
Sbjct: 582 MENMHGVVVLAATNRADMIDPALLRPGRFDKIIQ----------------VPNPDKDSRK 625

Query: 599 EILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            IL      +     D ++E ++  T G  GAD A++ N A  + +  Y
Sbjct: 626 RILEINAEKIPMG-EDVDLEKIAEITDGMSGADAASIANTAVSLVIHEY 673


>gi|315503511|ref|YP_004082398.1| adenosinetriphosphatase [Micromonospora sp. L5]
 gi|315410130|gb|ADU08247.1| Adenosinetriphosphatase [Micromonospora sp. L5]
          Length = 746

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 131/274 (47%), Positives = 180/274 (65%), Gaps = 1/274 (0%)

Query: 747  LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
            + DF  A   VRP+ M    LE+  V  +DVGG  EVK  L E+V WP  + + F R+G 
Sbjct: 457  MADFTAALEVVRPTTMSASTLELASVTLDDVGGLHEVKQTLTESVLWPLTYPDTFARLGV 516

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
             PP G+L++GPPGC KT +  A+A     N L+VKG EL SKWVGESE+AVR LF +AR 
Sbjct: 517  TPPRGVLLYGPPGCGKTYLVTALAGSGRANVLSVKGAELLSKWVGESERAVRELFRRARQ 576

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
             AP+++F DE+D LA +RG+ +DG   +DRV++ LL ELDG+    NV V+ ATNRP+ +
Sbjct: 577  AAPTLVFLDEVDALAPVRGQATDG-GTTDRVVAALLTELDGVEALRNVVVVGATNRPELV 635

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            DPALLRPGR +RL+YV PP+   R EI R   R +P + DV++  L    +G + AD + 
Sbjct: 636  DPALLRPGRLERLVYVPPPDGPARTEILRASARDVPLAPDVDLDALGAELDGFSAADCAA 695

Query: 987  ICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            + REAA++A+ E+L AS +T  H++ A   V+PS
Sbjct: 696  LIREAALAAMRESLSASTVTAAHVEAARNRVRPS 729



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/280 (36%), Positives = 151/280 (53%), Gaps = 29/280 (10%)

Query: 371 ETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSK-EYAILKDIIIS 429
           ET         A  + +R  T+  + +E  +V       +  +GGL + +  + + ++  
Sbjct: 451 ETPTVAMADFTAALEVVRPTTMSASTLELASVT------LDDVGGLHEVKQTLTESVLWP 504

Query: 430 SSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESE 489
            +   T + LG+ P +GVLL+GPPG GKT L    A     N+ +V G E++S+  GESE
Sbjct: 505 LTYPDTFARLGVTPPRGVLLYGPPGCGKTYLVTALAGSGRANVLSVKGAELLSKWVGESE 564

Query: 490 QALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDG 546
           +A+ E+F  A Q+AP +VF+DE+DA+AP R    DGG   + R+VA LL  +DGV     
Sbjct: 565 RAVRELFRRARQAAPTLVFLDEVDALAPVRGQATDGGT--TDRVVAALLTELDGVEALRN 622

Query: 547 VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS 606
           V+V+ ATNRP+ ++PAL RPGRL+R        ++    + PA       R EIL A  S
Sbjct: 623 VVVVGATNRPELVDPALLRPGRLER-------LVYVPPPDGPA-------RTEILRA--S 666

Query: 607 GMEHSLL-DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             +  L  D +++ L     GF  AD AAL  EAAL  +R
Sbjct: 667 ARDVPLAPDVDLDALGAELDGFSAADCAALIREAALAAMR 706



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 117/252 (46%), Gaps = 11/252 (4%)

Query: 775  EDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAG 834
            +++ G R    +L E ++    H+E   R+GT    G+L+ GP G  K+ + RAVA+  G
Sbjct: 232  DELPGLRAQAEELTELLDLGFHHREVLGRLGTTVSLGVLVEGPAGSGKSALVRAVAARVG 291

Query: 835  LNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS 894
                 +  PEL +     + + +R   +  RA  P+++   +++ +A      +D     
Sbjct: 292  AGVRPLWAPELAALSNDAAARRLREAASAVRAGGPAVLLVTDVESIA-----PADEPGPL 346

Query: 895  DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIF 954
              V  Q++ E      R    V+  + RP+ +DPAL  P      + V  P+   R E  
Sbjct: 347  ATVFRQVVAE----TLRAGAAVVCTSGRPEAVDPALRGPDLLALRITVPLPDAALRREQL 402

Query: 955  RIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--EENLDASRITMQHLKT 1012
             +  R++P + DV + E+A  + G   AD++ + REA + A   ++  +   + M     
Sbjct: 403  TVLTREVPLAGDVRLDEVAARTPGFVAADLAALVREAGVRAALRQKTAETPTVAMADFTA 462

Query: 1013 AIRHVQPSEIHS 1024
            A+  V+P+ + +
Sbjct: 463  ALEVVRPTTMSA 474



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 33/252 (13%)

Query: 409 DISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           D+ +L GL  +   L +++ +    +  L  LG   + GVL+ GP G+GK++L R  A  
Sbjct: 230 DVDELPGLRAQAEELTELLDLGFHHREVLGRLGTTVSLGVLVEGPAGSGKSALVRAVAAR 289

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
            G  +  +  PE+ + +   + + L E   +     PAV+ + ++++IAPA + G     
Sbjct: 290 VGAGVRPLWAPELAALSNDAAARRLREAASAVRAGGPAVLLVTDVESIAPADEPG----- 344

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
              +AT+   +       G  V+  + RP++++PALR P  L   I + +          
Sbjct: 345 --PLATVFRQVVAETLRAGAAVVCTSGRPEAVDPALRGPDLLALRITVPL---------- 392

Query: 588 PAAVPSPAQRLEILHAL-----LSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV 642
               P  A R E L  L     L+G      D  ++ ++  T GFV ADLAAL  EA + 
Sbjct: 393 ----PDAALRREQLTVLTREVPLAG------DVRLDEVAARTPGFVAADLAALVREAGVR 442

Query: 643 CLRRYSKIQTSS 654
              R    +T +
Sbjct: 443 AALRQKTAETPT 454


>gi|224121826|ref|XP_002318682.1| predicted protein [Populus trichocarpa]
 gi|222859355|gb|EEE96902.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/308 (44%), Positives = 196/308 (63%), Gaps = 10/308 (3%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   +K +L E V++P +H E F++ G  P 
Sbjct: 447  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENIKRELQETVQYPVEHPEKFEKFGMSPS 506

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 507  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 566

Query: 870  SIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG  S D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 567  CVLFFDELDSIATQRGNSSGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDP 626

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++  LA  + G +GADI+ IC
Sbjct: 627  ALLRPGRLDQLIYIPLPDEASRLQIFKACLRKSPVSRDVDLAALARYTHGFSGADITEIC 686

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++      +  +     ++  ++    E++A       KF R   S ++
Sbjct: 687  QRACKYAIRENIEKDIEKEKRKQDNPEAMEEDDVDEVPEITAAHFEESMKFAR--RSVSD 744

Query: 1042 ADESGYQL 1049
            AD   YQL
Sbjct: 745  ADIRKYQL 752



 Score =  226 bits (576), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 117/268 (43%), Positives = 162/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 195  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 254

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DE+D +A  R K    
Sbjct: 255  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHG- 313

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 314  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 372

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 373  LEVLRIHTKNMKLAEDVDLERVAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETV 432

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H +TA+    PS + 
Sbjct: 433  DAEVLNSMAVTNDHFQTALGTSNPSALR 460



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 201 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 260

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDELD+IAP R+    E+ +R+V
Sbjct: 261 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIV 320

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 321 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 366

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 367 PDEVGRLEVLRIHTKNMKLA-EDVDLERVAKDTHGYVGADLAALCTEAALQCIR 419



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 121/215 (56%), Gaps = 22/215 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 498 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 557

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD-----GGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           FD A QSAP V+F DELD+IA  R +     GG   + R++  LL  MDG+     V +I
Sbjct: 558 FDKARQSAPCVLFFDELDSIATQRGNSSGDAGG--AADRVLNQLLTEMDGMTAKKTVFII 615

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
            ATNRPD I+PAL RPGRLD+ I I +              P  A RL+I  A L     
Sbjct: 616 GATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEASRLQIFKACLRKSPV 661

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           S  D ++  L+  THGF GAD+  +C  A    +R
Sbjct: 662 S-RDVDLAALARYTHGFSGADITEICQRACKYAIR 695


>gi|410667409|ref|YP_006919780.1| cell division control protein 48 [Thermacetogenium phaeum DSM 12270]
 gi|409105156|gb|AFV11281.1| cell division control protein 48 [Thermacetogenium phaeum DSM 12270]
          Length = 707

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/287 (50%), Positives = 188/287 (65%), Gaps = 17/287 (5%)

Query: 745  LELVD--------FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            LE+VD        F +A  +V PSA+REV +E+P V+WE+VGG  E+K +L EAVEWP  
Sbjct: 412  LEIVDRLQVCRRHFLQALNEVEPSALREVYVEIPHVEWEEVGGLEEIKRELREAVEWPLF 471

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            + E  +  G  P  GIL+ GPPG  KTL+ARAVAS +  NF++VKGPELFSKWVGESE+A
Sbjct: 472  YPELLREAGVVPAKGILLVGPPGTGKTLLARAVASASKANFISVKGPELFSKWVGESERA 531

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            VR +F KAR   P I+FFDEID L + RG  SDG   SD+V+ QLL E+DG+     + V
Sbjct: 532  VRQIFRKARQATPCIVFFDEIDALVSSRG--SDGDPTSDKVLGQLLTEIDGIEGLRGIIV 589

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
            +AATNRPD+IDPALLRPGRFD +L +  P+   RE+I RIH    P + DV++ ELA  +
Sbjct: 590  LAATNRPDRIDPALLRPGRFDLVLTLPLPDLRSREQILRIHTAGKPLAGDVDLAELAGET 649

Query: 977  EGCTGADISLICREAAISAIEENL-------DASRITMQHLKTAIRH 1016
            EG +GAD+  +C  A+  AI   L        A R+ +Q  K   +H
Sbjct: 650  EGFSGADLRYVCWRASWLAIRRFLAANYREGGAKRVPLQVEKEDFQH 696



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/274 (44%), Positives = 167/274 (60%), Gaps = 19/274 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +ED+GG  +   ++ E +E P K+ E F  +G  PP G+L++GPPG  KTL+ARAVA 
Sbjct: 173  VSYEDIGGLGKEIRKIREMLELPLKYPEVFAHLGIDPPRGVLLYGPPGTGKTLIARAVAH 232

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E    FL V GPE+  K+ GESE  +R +F KARANAPSIIF DEID +A  R +E  G 
Sbjct: 233  ETNACFLHVNGPEIIHKYYGESEARLREIFEKARANAPSIIFLDEIDAVAP-RREEVHG- 290

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  RV++QLL  +DGL  R  V VI ATN P+ +DPAL RPGRFDR + +G P++  R 
Sbjct: 291  EVEKRVVAQLLALMDGLESRGQVVVIGATNIPNALDPALRRPGRFDREIAIGVPDQNGRL 350

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL----------- 1000
            EI +IH R +P + DV + E+A L+ G  GAD+  +C+EAA+ A+ + L           
Sbjct: 351  EILQIHTRGMPLAKDVLLEEIAGLTHGFVGADLQALCKEAAMLALRQALPQLEGGSPGGT 410

Query: 1001 -----DASRITMQHLKTAIRHVQPSEIHS-YKEL 1028
                 D  ++  +H   A+  V+PS +   Y E+
Sbjct: 411  SLEIVDRLQVCRRHFLQALNEVEPSALREVYVEI 444



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/245 (44%), Positives = 155/245 (63%), Gaps = 18/245 (7%)

Query: 403 QATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           QA+V  +   +GGL KE   +++++ +        + LG+ P +GVLL+GPPGTGKT +A
Sbjct: 170 QASVSYE--DIGGLGKEIRKIREMLELPLKYPEVFAHLGIDPPRGVLLYGPPGTGKTLIA 227

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD 521
           R  AH++      VNGPE++ + YGESE  L E+F+ A  +AP+++F+DE+DA+AP R++
Sbjct: 228 RAVAHETNACFLHVNGPEIIHKYYGESEARLREIFEKARANAPSIIFLDEIDAVAPRREE 287

Query: 522 GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLF 581
              E+ +R+VA LL LMDG+     V+VI ATN P++++PALRRPGR DREI I      
Sbjct: 288 VHGEVEKRVVAQLLALMDGLESRGQVVVIGATNIPNALDPALRRPGRFDREIAI------ 341

Query: 582 SLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
                    VP    RLEIL     GM  +  D  +E ++  THGFVGADL ALC EAA+
Sbjct: 342 --------GVPDQNGRLEILQIHTRGMPLA-KDVLLEEIAGLTHGFVGADLQALCKEAAM 392

Query: 642 VCLRR 646
           + LR+
Sbjct: 393 LALRQ 397



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 124/215 (57%), Gaps = 21/215 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           L   G+ P KG+LL GPPGTGKT LAR  A  S  N  +V GPE+ S+  GESE+A+ ++
Sbjct: 476 LREAGVVPAKGILLVGPPGTGKTLLARAVASASKANFISVKGPELFSKWVGESERAVRQI 535

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A Q+ P +VF DE+DA+  +R   G+  S +++  LL  +DG+    G++V+AATNR
Sbjct: 536 FRKARQATPCIVFFDEIDALVSSRGSDGDPTSDKVLGQLLTEIDGIEGLRGIIVLAATNR 595

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFS---LLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           PD I+PAL RPGR D  + + +  L S   +L+   A  P            L+G     
Sbjct: 596 PDRIDPALLRPGRFDLVLTLPLPDLRSREQILRIHTAGKP------------LAG----- 638

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            D ++  L+  T GF GADL  +C  A+ + +RR+
Sbjct: 639 -DVDLAELAGETEGFSGADLRYVCWRASWLAIRRF 672


>gi|449440119|ref|XP_004137832.1| PREDICTED: cell division cycle protein 48 homolog [Cucumis sativus]
 gi|449525650|ref|XP_004169829.1| PREDICTED: cell division cycle protein 48 homolog [Cucumis sativus]
          Length = 804

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 175/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV +R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPISKDVELRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 696  QRACKYAIRENIE 708



 Score =  229 bits (585), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 166/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + +V++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEEVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEILNSMAVTNEHFQTALGTSNPSALR 469



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 103/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  + ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EEVDLERIAKDTHGYVGADLAALCTEAALQCIR 428



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    RL+I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEESRLQIFKACLRKSPIS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D E+  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVELRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|448730497|ref|ZP_21712805.1| ATPase AAA [Halococcus saccharolyticus DSM 5350]
 gi|445793665|gb|EMA44237.1| ATPase AAA [Halococcus saccharolyticus DSM 5350]
          Length = 754

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/308 (46%), Positives = 196/308 (63%), Gaps = 12/308 (3%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D + A   + PSA+REV +EVP V WE VGG  + K +L E V+WP  + E F+ +    
Sbjct: 439  DVKNALKGIEPSALREVFVEVPDVTWESVGGLEDTKERLRETVQWPLDYPEVFEAMDMNA 498

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G++M+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F+KAR NA
Sbjct: 499  AKGVMMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKFVGESEKGVREVFSKARENA 558

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA +NRPD ID 
Sbjct: 559  PTVIFFDEIDSIAGERGRNMGDSGVGERVVSQLLTELDGLEELEDVVVIATSNRPDLIDS 618

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  RE IF +H R  P + D+++ +LA  ++G  GADI  + 
Sbjct: 619  ALLRPGRLDRHVHVPVPDEDAREAIFEVHTRDKPLADDIDLADLARRTKGYVGADIEAVT 678

Query: 989  REAAISA----IE----ENLDAS----RITMQHLKTAIRHVQPSEIHSYKELSAKFQRLV 1036
            REAA++A    IE    E++D S    RI   H + A+  V  S     +E   + Q   
Sbjct: 679  REAAMAATREFIESVDPEDIDGSVGNVRIDESHFEHALSEVTASVTEETRERYDEIQDRF 738

Query: 1037 HSNAEADE 1044
             S   A++
Sbjct: 739  DSGEPAED 746



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 168/266 (63%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 187  PSVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLIAKAV 246

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N P+I+F DEID +A  R   S 
Sbjct: 247  ANEIDAHFETISGPEIMSKYYGESEEQLREMFDEAEENEPAIVFIDEIDSIAPKRDDTSG 306

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++  
Sbjct: 307  --DVERRVVAQLLSLMDGLEERGQVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKEG 364

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN 999
            R+EI ++H R +P + D+++ + A  + G  G+DI  + +E+A++A+          EE 
Sbjct: 365  RKEILQVHTRGMPLADDIDLDQYAENTHGFVGSDIESLAKESAMNALRRIRPELDLDEEE 424

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T   +K A++ ++PS
Sbjct: 425  IDAEVLESMQVTRDDVKNALKGIEPS 450



 Score =  198 bits (503), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/235 (45%), Positives = 149/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 194 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAH 253

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+FD A ++ PA+VFIDE+D+IAP R D   ++ +R+V
Sbjct: 254 FETISGPEIMSKYYGESEEQLREMFDEAEENEPAIVFIDEIDSIAPKRDDTSGDVERRVV 313

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 314 AQLLSLMDGLEERGQVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 359

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  +  D +++  +  THGFVG+D+ +L  E+A+  LRR
Sbjct: 360 PDKEGRKEILQVHTRGMPLA-DDIDLDQYAENTHGFVGSDIESLAKESAMNALRR 413



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 147/273 (53%), Gaps = 28/273 (10%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
              ++ +   KGV+++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 490 VFEAMDMNAAKGVMMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKFVGESEKGVRE 549

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP V+F DE+D+IA    R  G   + +R+V+ LL  +DG+   + V+VIA 
Sbjct: 550 VFSKARENAPTVIFFDEIDSIAGERGRNMGDSGVGERVVSQLLTELDGLEELEDVVVIAT 609

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           +NRPD I+ AL RPGRLDR + +               VP    R  I    +   +  L
Sbjct: 610 SNRPDLIDSALLRPGRLDRHVHV--------------PVPDEDAREAIFE--VHTRDKPL 653

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSD 671
            D  ++  L+  T G+VGAD+ A+  EAA+   R + +     D+  S G +   E H +
Sbjct: 654 ADDIDLADLARRTKGYVGADIEAVTREAAMAATREFIESVDPEDIDGSVGNVRIDESHFE 713

Query: 672 TMLQDSDCSRNITESSR-------DCLDSASPC 697
             L  S+ + ++TE +R       D  DS  P 
Sbjct: 714 HAL--SEVTASVTEETRERYDEIQDRFDSGEPA 744


>gi|393794936|ref|ZP_10378300.1| ATPase AAA, partial [Candidatus Nitrosoarchaeum limnia BG20]
          Length = 443

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 135/289 (46%), Positives = 196/289 (67%), Gaps = 20/289 (6%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+KA ++V PS MREV +E P VKWE+VGG  +VK +L EAVEWP K+   + ++G + 
Sbjct: 139  DFQKALIEVTPSGMREVFIENPDVKWEEVGGLEDVKRELQEAVEWPMKYPGLYDKLGHKM 198

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+ GP G  KTL+A+AVA+++  NF++V+GPEL SKWVGESE+ +R +F +AR  +
Sbjct: 199  PRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFRRARQAS 258

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P ++FFDEID +A IRG   +  +V++RV+SQLL ELDG+     V V+AATNRPD IDP
Sbjct: 259  PCVVFFDEIDSIAPIRGAGGE-TAVTERVVSQLLTELDGMENMHGVVVLAATNRPDMIDP 317

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD------VNIRELACLSEGCTGA 982
            ALLRPGRFD+++ +  P++  R+ I +I+  KIP + D      V+I ++A L++G +GA
Sbjct: 318  ALLRPGRFDKIIQIPLPDKESRKMILKINAEKIPINDDPNDPQRVDIDKIAELTDGLSGA 377

Query: 983  DISLICREAAISAIEENLDA-------------SRITMQHLKTAIRHVQ 1018
            D + I   A    I E LDA             +++TM+H + A++ V+
Sbjct: 378  DTAAIANTAVSLVIHEFLDAHPDVKDIEKSSTDAKVTMKHFEAAVKKVR 426



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/220 (40%), Positives = 128/220 (58%), Gaps = 26/220 (11%)

Query: 437 SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 496
             LG +  +G+LLHGP GTGKT LA+  A  S  N  +V GPE++S+  GESE+ + E+F
Sbjct: 192 DKLGHKMPRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIF 251

Query: 497 DSASQSAPAVVFIDELDAIAPARKDGGEE-LSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
             A Q++P VVF DE+D+IAP R  GGE  +++R+V+ LL  +DG+    GV+V+AATNR
Sbjct: 252 RRARQASPCVVFFDEIDSIAPIRGAGGETAVTERVVSQLLTELDGMENMHGVVVLAATNR 311

Query: 556 PDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAV-----PSPAQRLEILHALLSG 607
           PD I+PAL RPGR D+ I+I   D      +LK +   +     P+  QR++I       
Sbjct: 312 PDMIDPALLRPGRFDKIIQIPLPDKESRKMILKINAEKIPINDDPNDPQRVDI------- 364

Query: 608 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
                     + ++  T G  GAD AA+ N A  + +  +
Sbjct: 365 ----------DKIAELTDGLSGADTAAIANTAVSLVIHEF 394



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 15/143 (10%)

Query: 893  VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREE 952
            V  RV+SQ+L  +DGL  R  V VIAATNRP+ IDPAL RPGRFDR + +  P++  R++
Sbjct: 8    VERRVVSQMLSLMDGLEARGKVIVIAATNRPNAIDPALRRPGRFDREIEIKVPDKKGRKD 67

Query: 953  IFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE--------------- 997
            I  IH R +P S DVN+ +++ +S G  GAD+  +C+EAA+  +                
Sbjct: 68   ILAIHSRNMPLSDDVNVEKISSVSHGYVGADLEYLCKEAAMKCLRRLLPELNMEEEKLPP 127

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            E LD   +  +  + A+  V PS
Sbjct: 128  ETLDKLIVNNEDFQKALIEVTPS 150



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/122 (48%), Positives = 75/122 (61%), Gaps = 15/122 (12%)

Query: 525 ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
           E+ +R+V+ +L+LMDG+     V+VIAATNRP++I+PALRRPGR DREIEI         
Sbjct: 7   EVERRVVSQMLSLMDGLEARGKVIVIAATNRPNAIDPALRRPGRFDREIEI--------- 57

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 VP    R +IL      M  S  D  VE +S  +HG+VGADL  LC EAA+ CL
Sbjct: 58  -----KVPDKKGRKDILAIHSRNMPLS-DDVNVEKISSVSHGYVGADLEYLCKEAAMKCL 111

Query: 645 RR 646
           RR
Sbjct: 112 RR 113


>gi|356543494|ref|XP_003540195.1| PREDICTED: cell division cycle protein 48 homolog [Glycine max]
          Length = 807

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/349 (42%), Positives = 210/349 (60%), Gaps = 28/349 (8%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V W+D+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + +V++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVAKNVDLRTLARHTQGFSGADITEIC 695

Query: 989  REAAISAIEENLDAS----RITMQHLKTAIRHVQPSEIHSYK----ELSAKFQRLVHSNA 1040
            + A   AI EN++      R + ++ +         E+   K    E S KF R   S +
Sbjct: 696  QRACKYAIRENIEKDIERERKSKENPEAMDEDTVDDEVAEIKAAHFEESMKFAR--RSVS 753

Query: 1041 EADESGYQ-----LRPSKSIGSNMWTLIKSISLFLCRFPAGLSQSESGS 1084
            +AD   YQ     L+ S+  GS              RFP    ++ +GS
Sbjct: 754  DADIRKYQAFAQTLQQSRGFGSEF------------RFPESGDRTTTGS 790



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  S DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEVLNSMAVTNEHFQTALGTSNPSALR 469



 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 194/344 (56%), Gaps = 34/344 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
           P    RLE+L      M+ S  D ++E ++  THG+VGADLAALC EAAL C+R    + 
Sbjct: 376 PDEVGRLEVLRIHTKNMKLS-DDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434

Query: 651 -----QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
                   ++VL+S     E   H  T L  S+ S     + R+ +      + D    L
Sbjct: 435 DLEDETIDAEVLNSMAVTNE---HFQTALGTSNPS-----ALRETVVEVPNVSWDDIGGL 486

Query: 706 LSSSLPLRGTVS---EIADNFHN-GVSDSSGGMFMSEKGCALKL 745
            +    L+ TV    E  + F   G+S S G +F    GC   L
Sbjct: 487 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 530



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/216 (40%), Positives = 118/216 (54%), Gaps = 24/216 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDEDSRHQIFKACL---RKS 668

Query: 612 LLDSEVEYLSMATH--GFVGADLAALCNEAALVCLR 645
            +   V+  ++A H  GF GAD+  +C  A    +R
Sbjct: 669 PVAKNVDLRTLARHTQGFSGADITEICQRACKYAIR 704


>gi|225436524|ref|XP_002276976.1| PREDICTED: cell division cycle protein 48 homolog [Vitis vinifera]
          Length = 802

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 126/252 (50%), Positives = 175/252 (69%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 457  FKTALGTTNPSALRETVVEVPNVSWEDIGGLEYVKRELQETVQYPVEHPEKFEQFGMSPS 516

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL +KW GESE  VR +F KAR +A 
Sbjct: 517  RGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTKWFGESEANVREIFDKARQSAS 576

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
             ++FFDE+D +A  RG        +DRV++QLL+E+DG+  +  V +I ATNRPD IDPA
Sbjct: 577  CVLFFDELDSIATQRGSNLGDAGGADRVLNQLLIEMDGMSAKKTVFIIGATNRPDIIDPA 636

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            LLRPGR D+L+Y+  P+E  R +IF+  LRK P S  V++R LA  ++G +GADI+ IC+
Sbjct: 637  LLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKHVDLRALAKYTQGFSGADITEICQ 696

Query: 990  EAAISAIEENLD 1001
             A   AI EN++
Sbjct: 697  RACKYAIRENIE 708



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 120/265 (45%), Positives = 163/265 (61%), Gaps = 17/265 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+A+AVA
Sbjct: 205  EVGYDDVGGFRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAKAVA 264

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSI+F DEID +A  R K    
Sbjct: 265  NETGAFFFCINGPEIMSKLAGESEGNLRKAFEEAEKNAPSIVFIDEIDSIAPKREKTHG- 323

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 324  -QVEKRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 382

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  S DV++  +A  S G  GAD++ +C EAA+ +I E +D         
Sbjct: 383  LEVLRIHTKNMKLSDDVDLERIAKDSHGYVGADLAALCTEAALQSIREKMDVIDLEDEAI 442

Query: 1002 ------ASRITMQHLKTAIRHVQPS 1020
                  +  +T +H KTA+    PS
Sbjct: 443  DAEVLNSMAVTDKHFKTALGTTNPS 467



 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 102/234 (43%), Positives = 153/234 (65%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +A+  A+++G  
Sbjct: 211 VGGFRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAKAVANETGAF 270

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP++VFIDE+D+IAP R+    ++ +R+V
Sbjct: 271 FFCINGPEIMSKLAGESEGNLRKAFEEAEKNAPSIVFIDEIDSIAPKREKTHGQVEKRIV 330

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 331 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 376

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ S  D ++E ++  +HG+VGADLAALC EAAL  +R
Sbjct: 377 PDEVGRLEVLRIHTKNMKLS-DDVDLERIAKDSHGYVGADLAALCTEAALQSIR 429



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 117/214 (54%), Gaps = 21/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P++GVL +GPPG GKT LA+  A++   N  +V GPE++++ +GESE  + E+
Sbjct: 508 FEQFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTKWFGESEANVREI 567

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           FD A QSA  V+F DELD+IA  R    G    + R++  LL  MDG+     V +I AT
Sbjct: 568 FDKARQSASCVLFFDELDSIATQRGSNLGDAGGADRVLNQLLIEMDGMSAKKTVFIIGAT 627

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+PAL RPGRLD+ I I               +P    R +I  A L     S +
Sbjct: 628 NRPDIIDPALLRPGRLDQLIYI--------------PLPDEDSRHQIFKACL---RKSPV 670

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
              V+  ++A  T GF GAD+  +C  A    +R
Sbjct: 671 SKHVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|297734936|emb|CBI17170.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 126/252 (50%), Positives = 175/252 (69%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 398  FKTALGTTNPSALRETVVEVPNVSWEDIGGLEYVKRELQETVQYPVEHPEKFEQFGMSPS 457

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL +KW GESE  VR +F KAR +A 
Sbjct: 458  RGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTKWFGESEANVREIFDKARQSAS 517

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
             ++FFDE+D +A  RG        +DRV++QLL+E+DG+  +  V +I ATNRPD IDPA
Sbjct: 518  CVLFFDELDSIATQRGSNLGDAGGADRVLNQLLIEMDGMSAKKTVFIIGATNRPDIIDPA 577

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            LLRPGR D+L+Y+  P+E  R +IF+  LRK P S  V++R LA  ++G +GADI+ IC+
Sbjct: 578  LLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKHVDLRALAKYTQGFSGADITEICQ 637

Query: 990  EAAISAIEENLD 1001
             A   AI EN++
Sbjct: 638  RACKYAIRENIE 649



 Score =  201 bits (510), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/277 (40%), Positives = 153/277 (55%), Gaps = 48/277 (17%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+A+AVA
Sbjct: 159  EVGYDDVGGFRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAKAVA 218

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSI                   
Sbjct: 219  NETGAFFFCINGPEIMSKLAGESEGNLRKAFEEAEKNAPSI------------------- 259

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
                 R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 260  -----RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 314

Query: 951  EEIFRIHLRKIPCSSD---------VNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
             E+ RIH + +  S D         V++  +A  S G  GAD++ +C EAA+ +I E +D
Sbjct: 315  LEVLRIHTKNMKLSDDAIQKEKGIIVDLERIAKDSHGYVGADLAALCTEAALQSIREKMD 374

Query: 1002 ---------------ASRITMQHLKTAIRHVQPSEIH 1023
                           +  +T +H KTA+    PS + 
Sbjct: 375  VIDLEDEAIDAEVLNSMAVTDKHFKTALGTTNPSALR 411



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 137/242 (56%), Gaps = 45/242 (18%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +A+  A+++G  
Sbjct: 165 VGGFRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAKAVANETGAF 224

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP++                      R+V
Sbjct: 225 FFCINGPEIMSKLAGESEGNLRKAFEEAEKNAPSI----------------------RIV 262

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 263 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 308

Query: 592 PSPAQRLEILHALLSGMEHS--------LLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
           P    RLE+L      M+ S         +  ++E ++  +HG+VGADLAALC EAAL  
Sbjct: 309 PDEVGRLEVLRIHTKNMKLSDDAIQKEKGIIVDLERIAKDSHGYVGADLAALCTEAALQS 368

Query: 644 LR 645
           +R
Sbjct: 369 IR 370



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 117/214 (54%), Gaps = 21/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P++GVL +GPPG GKT LA+  A++   N  +V GPE++++ +GESE  + E+
Sbjct: 449 FEQFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTKWFGESEANVREI 508

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           FD A QSA  V+F DELD+IA  R    G    + R++  LL  MDG+     V +I AT
Sbjct: 509 FDKARQSASCVLFFDELDSIATQRGSNLGDAGGADRVLNQLLIEMDGMSAKKTVFIIGAT 568

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S +
Sbjct: 569 NRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACL---RKSPV 611

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
              V+  ++A  T GF GAD+  +C  A    +R
Sbjct: 612 SKHVDLRALAKYTQGFSGADITEICQRACKYAIR 645


>gi|363750704|ref|XP_003645569.1| hypothetical protein Ecym_3259 [Eremothecium cymbalariae DBVPG#7215]
 gi|356889203|gb|AET38752.1| Hypothetical protein Ecym_3259 [Eremothecium cymbalariae DBVPG#7215]
          Length = 774

 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 141/334 (42%), Positives = 210/334 (62%), Gaps = 19/334 (5%)

Query: 716  VSEIADNFHNGV-SDSSG------------GMFMSEKGCALKLELVDFEKARMKVRPSAM 762
            ++EIAD  H  V +D SG             +    K   LK+ + DFE A ++++PSAM
Sbjct: 439  ITEIADKTHGYVGTDLSGLCTLAVAHSKHRAIIEGIKIPDLKINVKDFEAAMLEIKPSAM 498

Query: 763  REVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSK 822
            RE+ LE+PKV W D+ GQ ++K++L E ++ P K  +  +R    PP G+L++GPPGCSK
Sbjct: 499  REIFLEMPKVYWSDIAGQEQLKSELEEVIQLPHKGADKLRRFQVSPPKGMLLYGPPGCSK 558

Query: 823  TLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
            TL A+A+A+E+G NF A+KGPE+ +K+VGE+E+ VR LF KA+A APSIIF DEID LA 
Sbjct: 559  TLTAKALATESGFNFFAIKGPEVLNKYVGETERTVRELFRKAKAAAPSIIFIDEIDELAK 618

Query: 883  IRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYV 942
             R +E+   + S  V+  LL E+DG+ +   V V+AATN+P+ ID AL+R GR D+ +YV
Sbjct: 619  TRDQEASS-AASGNVLITLLNEIDGVEELNGVVVVAATNKPEIIDSALIRSGRLDKHIYV 677

Query: 943  GPPNETDREEIFRIHLRKIPCSS-DVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
             PPN   R +I +   +     + DV++  LA L+E C+GA ++ +CR+AAI+A  E+  
Sbjct: 678  SPPNFEARLQILKNCTKTFGLKTEDVDLHNLANLTEHCSGAAVTQLCRDAAIAATREDFV 737

Query: 1002 ASRITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
               +  +H + A+    + V P  + SY+  S K
Sbjct: 738  DGDVEARHFEVALTKLTKDVMPESLVSYERFSKK 771



 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 99/234 (42%), Positives = 138/234 (58%), Gaps = 19/234 (8%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGLS+E   LK+ I +   +S      G+ P +G+LLHGPPGTGKT L R  A+++ 
Sbjct: 242 SSVGGLSREIQKLKETIEAPLYESEFYEECGIHPPRGILLHGPPGTGKTMLLRCVANENV 301

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQ 528
            ++ T+NGP + S+  GE+E+ L  +F+ A +  P+++ IDE+D+IAP R  D   E   
Sbjct: 302 AHIQTINGPSITSKYLGETEEKLRGIFEEARKFQPSIILIDEIDSIAPNRNNDDSGEAES 361

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+VATLL LMDGV     V+++A TNRP+ I+PALRRPGR + E+EI             
Sbjct: 362 RVVATLLTLMDGVDSEGRVVIVATTNRPNKIDPALRRPGRFNTEVEI------------- 408

Query: 589 AAVPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
             VP    R EIL   LS M        D E+  ++  THG+VG DL+ LC  A
Sbjct: 409 -GVPDAVSRREILKKQLSNMSEKRRDFTDDEITEIADKTHGYVGTDLSGLCTLA 461



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 156/286 (54%), Gaps = 18/286 (6%)

Query: 750  FEKARMKV----RPSAMREVILEVPKVKWEDVGG-QREVKTQLMEAVEWPQKHQEAFKRI 804
            F+K   K+    R    R   L  P +++  VGG  RE++ +L E +E P    E ++  
Sbjct: 214  FKKGYTKIIYTTRIEVDRRFKLSKP-LRYSSVGGLSREIQ-KLKETIEAPLYESEFYEEC 271

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G  PP GIL+ GPPG  KT++ R VA+E   +   + GP + SK++GE+E+ +R +F +A
Sbjct: 272  GIHPPRGILLHGPPGTGKTMLLRCVANENVAHIQTINGPSITSKYLGETEEKLRGIFEEA 331

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R   PSII  DEID +A  R  +  G + S RV++ LL  +DG+     V ++A TNRP+
Sbjct: 332  RKFQPSIILIDEIDSIAPNRNNDDSGEAES-RVVATLLTLMDGVDSEGRVVIVATTNRPN 390

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS----SDVNIRELACLSEGCT 980
            KIDPAL RPGRF+  + +G P+   R EI +  L  +       +D  I E+A  + G  
Sbjct: 391  KIDPALRRPGRFNTEVEIGVPDAVSRREILKKQLSNMSEKRRDFTDDEITEIADKTHGYV 450

Query: 981  GADISLICREAAIS----AIEENLDAS--RITMQHLKTAIRHVQPS 1020
            G D+S +C  A       AI E +     +I ++  + A+  ++PS
Sbjct: 451  GTDLSGLCTLAVAHSKHRAIIEGIKIPDLKINVKDFEAAMLEIKPS 496



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 15/211 (7%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           L    + P KG+LL+GPPG  KT  A+  A +SG N F + GPEV+++  GE+E+ + E+
Sbjct: 537 LRRFQVSPPKGMLLYGPPGCSKTLTAKALATESGFNFFAIKGPEVLNKYVGETERTVREL 596

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A  +AP+++FIDE+D +A  R ++     S  ++ TLLN +DGV   +GV+V+AATN
Sbjct: 597 FRKAKAAAPSIIFIDEIDELAKTRDQEASSAASGNVLITLLNEIDGVEELNGVVVVAATN 656

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           +P+ I+ AL R GRLD+ I +           SP   P+   RL+IL            D
Sbjct: 657 KPEIIDSALIRSGRLDKHIYV-----------SP---PNFEARLQILKNCTKTFGLKTED 702

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            ++  L+  T    GA +  LC +AA+   R
Sbjct: 703 VDLHNLANLTEHCSGAAVTQLCRDAAIAATR 733


>gi|298242539|ref|ZP_06966346.1| AAA family ATPase, CDC48 subfamily [Ktedonobacter racemifer DSM
            44963]
 gi|297555593|gb|EFH89457.1| AAA family ATPase, CDC48 subfamily [Ktedonobacter racemifer DSM
            44963]
          Length = 893

 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 132/280 (47%), Positives = 185/280 (66%), Gaps = 1/280 (0%)

Query: 729  DSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLM 788
            D   G    E    + + + DF+ A  ++ PS  REV +EV +  W+D+GG  ++K  L 
Sbjct: 483  DYQRGYIPYETLINMSITMADFQAALREIEPSTTREVYVEVSETSWDDIGGLEDIKQNLT 542

Query: 789  EAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSK 848
            E VEWP ++ + +      PP G+L+ GPPG  KTL+ARA+A++   NF+++KGPEL SK
Sbjct: 543  EGVEWPLRYPDIYANAKVEPPRGVLLAGPPGSGKTLIARALANQCEANFISIKGPELLSK 602

Query: 849  WVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGL 908
            WVGESEK VR +F +A+  AP ++FFDEID LA  RG   DG +V DR+++QLL E+DG+
Sbjct: 603  WVGESEKGVREVFRRAKQAAPCLVFFDEIDALAPRRGSGMDG-NVGDRLIAQLLTEMDGI 661

Query: 909  HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN 968
              R  V V+AATNRP+ IDPA+LRPGRFD ++ +  PNE +R  IF +HLR  P +S+V 
Sbjct: 662  EGREGVIVLAATNRPELIDPAILRPGRFDLVVELRYPNEDERRMIFDVHLRGRPIASEVT 721

Query: 969  IRELACLSEGCTGADISLICREAAISAIEENLDASRITMQ 1008
              ELA L++G +GADI  ICR AA+ A+ E +     T+Q
Sbjct: 722  SEELARLTDGRSGADIEAICRRAALLALREWITPQLNTLQ 761



 Score =  213 bits (542), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 111/274 (40%), Positives = 162/274 (59%), Gaps = 18/274 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + +ED+GG  +   ++ E +E P K+   F R+G  PP G+L++GPPG  KTL+AR VA+
Sbjct: 253  ISYEDIGGLGKELQRIREMIELPLKYPAVFDRLGVEPPKGVLLYGPPGTGKTLIARVVAA 312

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E    F  + GPE+ +K+ GESE  +RS+F +A+  APSIIF DE+D LA  R +   G 
Sbjct: 313  ETNAAFFVINGPEIINKFYGESESRLRSVFQEAQRQAPSIIFIDELDALAPKRAE--SGG 370

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++ QLL  +DGL  R  + +I ATN+P+ +DPA+ RPGRFDR + +  P+   R 
Sbjct: 371  EVERRIVGQLLALMDGLASRGQIVLIGATNQPNALDPAIRRPGRFDREIALRVPDVRGRT 430

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE---NLDASR---- 1004
            EI  IH R    +SD++   LA L+ G  GAD+  +CREAA+ A+     ++D  R    
Sbjct: 431  EILNIHSRDAAMASDIDFARLAQLTPGFVGADLEALCREAAMIALRRVLPHIDYQRGYIP 490

Query: 1005 --------ITMQHLKTAIRHVQPSEIHS-YKELS 1029
                    ITM   + A+R ++PS     Y E+S
Sbjct: 491  YETLINMSITMADFQAALREIEPSTTREVYVEVS 524



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL KE   ++++I +     +    LG+ P KGVLL+GPPGTGKT +AR+ A ++   
Sbjct: 258 IGGLGKELQRIREMIELPLKYPAVFDRLGVEPPKGVLLYGPPGTGKTLIARVVAAETNAA 317

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++++ YGESE  L  VF  A + AP+++FIDELDA+AP R + G E+ +R+V
Sbjct: 318 FFVINGPEIINKFYGESESRLRSVFQEAQRQAPSIIFIDELDALAPKRAESGGEVERRIV 377

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
             LL LMDG+     +++I ATN+P++++PA+RRPGR DREI +               V
Sbjct: 378 GQLLALMDGLASRGQIVLIGATNQPNALDPAIRRPGRFDREIALR--------------V 423

Query: 592 PSPAQRLEIL--HALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL  H+  + M     D +   L+  T GFVGADL ALC EAA++ LRR
Sbjct: 424 PDVRGRTEILNIHSRDAAMAS---DIDFARLAQLTPGFVGADLEALCREAAMIALRR 477



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 125/210 (59%), Gaps = 20/210 (9%)

Query: 441 LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSAS 500
           + P +GVLL GPPG+GKT +AR  A+    N  ++ GPE++S+  GESE+ + EVF  A 
Sbjct: 560 VEPPRGVLLAGPPGSGKTLIARALANQCEANFISIKGPELLSKWVGESEKGVREVFRRAK 619

Query: 501 QSAPAVVFIDELDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 559
           Q+AP +VF DE+DA+AP R  G +  +  R++A LL  MDG+   +GV+V+AATNRP+ I
Sbjct: 620 QAAPCLVFFDEIDALAPRRGSGMDGNVGDRLIAQLLTEMDGIEGREGVIVLAATNRPELI 679

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV-- 617
           +PA+ RPGR D  +E+                P+  +R  I    L G     + SEV  
Sbjct: 680 DPAILRPGRFDLVVELRY--------------PNEDERRMIFDVHLRGRP---IASEVTS 722

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRRY 647
           E L+  T G  GAD+ A+C  AAL+ LR +
Sbjct: 723 EELARLTDGRSGADIEAICRRAALLALREW 752


>gi|297816624|ref|XP_002876195.1| hypothetical protein ARALYDRAFT_485698 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297322033|gb|EFH52454.1| hypothetical protein ARALYDRAFT_485698 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 810

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 125/253 (49%), Positives = 177/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF+++KGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + +   AI EN++
Sbjct: 696  QRSCKYAIRENIE 708



 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 116/268 (43%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DE+D +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H +TA+ +  PS + 
Sbjct: 442  DAEILNSMAVTNDHFQTALGNSNPSALR 469



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDELD+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E +S  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEIGRLEVLRIHTKNMKLA-EDVDLERVSKDTHGYVGADLAALCTEAALQCIR 428



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 118/215 (54%), Gaps = 22/215 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  ++ GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD-----GGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           FD A QSAP V+F DELD+IA  R +     GG   + R++  LL  MDG+     V +I
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGNSVGDAGG--AADRVLNQLLTEMDGMNAKKTVFII 624

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
            ATNRPD I+PAL RPGRLD+ I I +              P    R +I  + L     
Sbjct: 625 GATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEESRYQIFKSCLRKSPV 670

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           +  D ++  L+  T GF GAD+  +C  +    +R
Sbjct: 671 A-KDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704


>gi|15231775|ref|NP_190891.1| cell division control protein 48-D [Arabidopsis thaliana]
 gi|28201772|sp|Q9SCN8.1|CD48D_ARATH RecName: Full=Cell division control protein 48 homolog D;
            Short=AtCDC48d; AltName: Full=Transitional endoplasmic
            reticulum ATPase D
 gi|6630743|emb|CAB64226.1| CDC48-like protein [Arabidopsis thaliana]
 gi|110737510|dbj|BAF00697.1| CDC48 - like protein [Arabidopsis thaliana]
 gi|332645529|gb|AEE79050.1| cell division control protein 48-D [Arabidopsis thaliana]
          Length = 815

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 125/253 (49%), Positives = 177/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 456  FQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF+++KGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + DV++R LA  ++G +GADI+ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEIC 695

Query: 989  REAAISAIEENLD 1001
            + +   AI EN++
Sbjct: 696  QRSCKYAIRENIE 708



 Score =  226 bits (576), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 116/268 (43%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  ++  H +TA+ +  PS + 
Sbjct: 442  DAEILNSMAVSNDHFQTALGNSNPSALR 469



 Score =  202 bits (515), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E +S  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEIGRLEVLRIHTKNMKLA-EDVDLERVSKDTHGYVGADLAALCTEAALQCIR 428



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 118/215 (54%), Gaps = 22/215 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  ++ GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD-----GGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           FD A QSAP V+F DELD+IA  R +     GG   + R++  LL  MDG+     V +I
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGNSVGDAGG--AADRVLNQLLTEMDGMNAKKTVFII 624

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
            ATNRPD I+PAL RPGRLD+ I I +              P    R +I  + L     
Sbjct: 625 GATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEESRYQIFKSCLRKSPV 670

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           +  D ++  L+  T GF GAD+  +C  +    +R
Sbjct: 671 A-KDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704


>gi|329766718|ref|ZP_08258261.1| AAA family ATPase, CDC48 subfamily protein [Candidatus
            Nitrosoarchaeum limnia SFB1]
 gi|329136973|gb|EGG41266.1| AAA family ATPase, CDC48 subfamily protein [Candidatus
            Nitrosoarchaeum limnia SFB1]
          Length = 728

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 135/289 (46%), Positives = 196/289 (67%), Gaps = 20/289 (6%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+KA ++V PS MREV +E P VKWE+VGG  +VK +L EAVEWP K+   + ++G + 
Sbjct: 424  DFQKALIEVTPSGMREVFIENPDVKWEEVGGLEDVKRELQEAVEWPMKYPGLYDKLGHKM 483

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+ GP G  KTL+A+AVA+++  NF++V+GPEL SKWVGESE+ +R +F +AR  +
Sbjct: 484  PRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFRRARQAS 543

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P ++FFDEID +A IRG   +  +V++RV+SQLL ELDG+     V V+AATNRPD IDP
Sbjct: 544  PCVVFFDEIDSIAPIRGAGGE-TAVTERVVSQLLTELDGMENMHGVVVLAATNRPDMIDP 602

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS------DVNIRELACLSEGCTGA 982
            ALLRPGRFD+++ +  P++  R+ I RI+  KIP ++       V+I ++A L++G +GA
Sbjct: 603  ALLRPGRFDKIIQIPLPDKESRKMILRINAEKIPINNTPSDPQHVDIDKIAELTDGLSGA 662

Query: 983  DISLICREAAISAIEENLDA-------------SRITMQHLKTAIRHVQ 1018
            D + I   A    I E LDA             +++TM+H + A++ V+
Sbjct: 663  DTAAIANTAVSLVIHEFLDAHPDVKDIEKSSADAKVTMKHFEAAVKKVR 711



 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 116/272 (42%), Positives = 171/272 (62%), Gaps = 17/272 (6%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E +  VP+V +ED+GG  +   ++ E +E P +H E F+++G   P G+L++GPPG  KT
Sbjct: 166  ETLRGVPQVTYEDIGGLTDEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKT 225

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+AVA+E+  +F+++ GPE+ SK+ GESE  +R +F +AR  APSIIF DEID +A  
Sbjct: 226  LLAKAVANESQAHFISISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPK 285

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            R +E  G  V  RV+SQ+L  +DGL  R  V VIAATNRP+ IDPAL RPGRFDR + + 
Sbjct: 286  R-EEVTG-EVERRVVSQMLSLMDGLEARGKVIVIAATNRPNAIDPALRRPGRFDREIEIK 343

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------ 997
             P++  R++I  IH R +P S DVN+ +++ +S G  GAD+  +C+EAA+  +       
Sbjct: 344  VPDKKGRKDILAIHSRNMPLSDDVNVEKISSVSHGYVGADLEYLCKEAAMKCLRRLLPEL 403

Query: 998  ---------ENLDASRITMQHLKTAIRHVQPS 1020
                     E LD   +  +  + A+  V PS
Sbjct: 404  NMEEEKLPPETLDKLIVNNEDFQKALIEVTPS 435



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 106/235 (45%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL+ E   ++++I +          LG+   KGVLL+GPPGTGKT LA+  A++S  +
Sbjct: 179 IGGLTDEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKTLLAKAVANESQAH 238

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE  L E+F  A + AP+++F+DE+D+IAP R++   E+ +R+V
Sbjct: 239 FISISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPKREEVTGEVERRVV 298

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + +L+LMDG+     V+VIAATNRP++I+PALRRPGR DREIEI               V
Sbjct: 299 SQMLSLMDGLEARGKVIVIAATNRPNAIDPALRRPGRFDREIEI--------------KV 344

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R +IL      M  S  D  VE +S  +HG+VGADL  LC EAA+ CLRR
Sbjct: 345 PDKKGRKDILAIHSRNMPLS-DDVNVEKISSVSHGYVGADLEYLCKEAAMKCLRR 398



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 127/214 (59%), Gaps = 16/214 (7%)

Query: 438 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 497
            LG +  +G+LLHGP GTGKT LA+  A  S  N  +V GPE++S+  GESE+ + E+F 
Sbjct: 478 KLGHKMPRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFR 537

Query: 498 SASQSAPAVVFIDELDAIAPARKDGGEE-LSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
            A Q++P VVF DE+D+IAP R  GGE  +++R+V+ LL  +DG+    GV+V+AATNRP
Sbjct: 538 RARQASPCVVFFDEIDSIAPIRGAGGETAVTERVVSQLLTELDGMENMHGVVVLAATNRP 597

Query: 557 DSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           D I+PAL RPGR D+ I+I   D      +L+ +   +P        ++   S  +H  +
Sbjct: 598 DMIDPALLRPGRFDKIIQIPLPDKESRKMILRINAEKIP--------INNTPSDPQHVDI 649

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           D   E     T G  GAD AA+ N A  + +  +
Sbjct: 650 DKIAEL----TDGLSGADTAAIANTAVSLVIHEF 679


>gi|66357178|ref|XP_625767.1| CDC48 like AAA ATpase [Cryptosporidium parvum Iowa II]
 gi|46226983|gb|EAK87949.1| CDC48 like AAA ATpase [Cryptosporidium parvum Iowa II]
          Length = 891

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 138/352 (39%), Positives = 196/352 (55%), Gaps = 62/352 (17%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            L   D   +   ++PSA+RE+ +E+PK  W D+GG  EVK QL E VEWP  H E F+ +
Sbjct: 535  LSFDDIHNSVKNIKPSALRELAIEIPKTDWNDIGGYEEVKEQLKECVEWPLIHSELFEYM 594

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
              +PP+G+L++GPPGCSKTLMA+AVA+E+ +NF++VKGPELFSKWVGESEK++R +F KA
Sbjct: 595  KIKPPSGVLLYGPPGCSKTLMAKAVATESKMNFISVKGPELFSKWVGESEKSIREIFRKA 654

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R N+P IIFFDEID +   R   S+   VS RV+SQ+L E+DG+     V VI ATNRPD
Sbjct: 655  RQNSPCIIFFDEIDAIGVNRESMSNTSDVSTRVLSQMLNEMDGITTNKQVIVIGATNRPD 714

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR------------------------- 959
             +D ALLRPGR DR++Y+G P+   R++I  I+L+                         
Sbjct: 715  LLDSALLRPGRLDRIIYIGLPDSKARKKILNIYLKSKNYIQIDDCNKDNNNNGTSFEGNL 774

Query: 960  -------------------------KIPCSSDVNIRELACLSEGCTGADISLICREAAIS 994
                                     +I  S D  I  L  L+ G +GA+++L+CRE  + 
Sbjct: 775  DSLNATNHNIDSLEVIELCDNITNMEIFDSYDEMIDSLVNLTNGYSGAELALLCRETMMQ 834

Query: 995  AIEENL------------DASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
             I   +            + ++ T + +  A+  V+P   HS  E    + +
Sbjct: 835  VIRRTITNRLNSNKDSISNHAKFTWRDISFALNKVKPRIPHSLIEFYENYNK 886



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 158/319 (49%), Gaps = 44/319 (13%)

Query: 366 FVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKD 425
           FV N +  +  +  ++   K+++   L    IE        + D + +GG  +    LK+
Sbjct: 526 FVDNDQFTLLSFDDIHNSVKNIKPSALRELAIEIP------KTDWNDIGGYEEVKEQLKE 579

Query: 426 IIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQN 484
            +    + S L   + ++P  GVLL+GPPG  KT +A+  A +S +N  +V GPE+ S+ 
Sbjct: 580 CVEWPLIHSELFEYMKIKPPSGVLLYGPPGCSKTLMAKAVATESKMNFISVKGPELFSKW 639

Query: 485 YGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK--DGGEELSQRMVATLLNLMDGVC 542
            GESE+++ E+F  A Q++P ++F DE+DAI   R+      ++S R+++ +LN MDG+ 
Sbjct: 640 VGESEKSIREIFRKARQNSPCIIFFDEIDAIGVNRESMSNTSDVSTRVLSQMLNEMDGIT 699

Query: 543 RTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM-------SFLFSLLK---------- 585
               V+VI ATNRPD ++ AL RPGRLDR I I +         L   LK          
Sbjct: 700 TNKQVIVIGATNRPDLLDSALLRPGRLDRIIYIGLPDSKARKKILNIYLKSKNYIQIDDC 759

Query: 586 ---------------NSPAAVPSPAQRLEILHAL--LSGME-HSLLDSEVEYLSMATHGF 627
                          +S  A       LE++     ++ ME     D  ++ L   T+G+
Sbjct: 760 NKDNNNNGTSFEGNLDSLNATNHNIDSLEVIELCDNITNMEIFDSYDEMIDSLVNLTNGY 819

Query: 628 VGADLAALCNEAALVCLRR 646
            GA+LA LC E  +  +RR
Sbjct: 820 SGAELALLCRETMMQVIRR 838



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 142/266 (53%), Gaps = 36/266 (13%)

Query: 403 QATVEQDISKLGGLSK-EYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           Q+  +  + K+GG++  ++ I K II         SS G++P+KG+LL+GPPGTGKT +A
Sbjct: 269 QSKRKYGLDKIGGMNHLKHEINKCIINPLKFSKIYSSFGIKPSKGILLYGPPGTGKTLIA 328

Query: 462 RLCA----------HDS----GVNLFTVNGPEVVSQNYGESEQ---ALHEVFDSASQSA- 503
           R  A           DS     V+   ++G  + +    E      ++ +V D++ +   
Sbjct: 329 RSIAEEIELITTFKQDSDLELSVDFIVIDGSNISNNTDDEDNHFFNSIQKVKDNSKKDEF 388

Query: 504 -PAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
              ++FIDE+D I  +R    G  + +++ +  +L+L+DG    + V +IA TN+P+ I+
Sbjct: 389 IYTILFIDEIDLICGSRDSFSGINDQNKKYLTAILSLLDGFDENNRVTLIATTNKPNEID 448

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
           PALRR GR+DREI ++              VP+  +R EIL  +L  + ++L DSE++ L
Sbjct: 449 PALRRAGRIDREIAVE--------------VPNSLERKEILELMLIDIPNNLNDSEIDSL 494

Query: 621 SMATHGFVGADLAALCNEAALVCLRR 646
              T  FVGADL  L NE+    L R
Sbjct: 495 VDETQAFVGADLKMLINESINRFLER 520



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 139/279 (49%), Gaps = 30/279 (10%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            K   + +GG   +K ++ + +  P K  + +   G +P  GIL++GPPG  KTL+AR++A
Sbjct: 273  KYGLDKIGGMNHLKHEINKCIINPLKFSKIYSSFGIKPSKGILLYGPPGTGKTLIARSIA 332

Query: 831  SEAGL--------------NFLAVKGPELFSKWVGESEKAVRSLFAKARANAP------S 870
             E  L              +F+ + G  + +    E      S+  K + N+       +
Sbjct: 333  EEIELITTFKQDSDLELSVDFIVIDGSNISNNTDDEDNHFFNSI-QKVKDNSKKDEFIYT 391

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
            I+F DEID +   R   S     + + ++ +L  LDG  +   VT+IA TN+P++IDPAL
Sbjct: 392  ILFIDEIDLICGSRDSFSGINDQNKKYLTAILSLLDGFDENNRVTLIATTNKPNEIDPAL 451

Query: 931  LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICR 989
             R GR DR + V  PN  +R+EI  + L  IP + +D  I  L   ++   GAD+ ++  
Sbjct: 452  RRAGRIDREIAVEVPNSLERKEILELMLIDIPNNLNDSEIDSLVDETQAFVGADLKMLIN 511

Query: 990  EAAISAIE-----ENLDASRITM---QHLKTAIRHVQPS 1020
            E+    +E     E +D  + T+     +  ++++++PS
Sbjct: 512  ESINRFLERTTNTEFVDNDQFTLLSFDDIHNSVKNIKPS 550


>gi|302870211|ref|YP_003838848.1| adenosinetriphosphatase [Micromonospora aurantiaca ATCC 27029]
 gi|302573070|gb|ADL49272.1| Adenosinetriphosphatase [Micromonospora aurantiaca ATCC 27029]
          Length = 746

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 131/274 (47%), Positives = 180/274 (65%), Gaps = 1/274 (0%)

Query: 747  LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
            + DF  A   VRP+ M    LE+  V  +DVGG  EVK  L E+V WP  + + F R+G 
Sbjct: 457  MADFTAALEVVRPTTMSASTLELASVTLDDVGGLHEVKQTLTESVLWPLTYPDTFARLGV 516

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
             PP G+L++GPPGC KT +  A+A     N L+VKG EL SKWVGESE+AVR LF +AR 
Sbjct: 517  TPPRGVLLYGPPGCGKTYLVTALAGSGRANVLSVKGAELLSKWVGESERAVRELFRRARQ 576

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
             AP+++F DE+D LA +RG+ +DG   +DRV++ LL ELDG+    NV V+ ATNRP+ +
Sbjct: 577  AAPTLVFLDEVDALAPVRGQATDG-GTTDRVVAALLTELDGVEALRNVVVVGATNRPELV 635

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            DPALLRPGR +RL+YV PP+   R EI R   R +P + DV++  L    +G + AD + 
Sbjct: 636  DPALLRPGRLERLVYVPPPDGPARTEILRASARDVPLAPDVDLDALGGELDGFSAADCAA 695

Query: 987  ICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            + REAA++A+ E+L AS +T  H++ A   V+PS
Sbjct: 696  LIREAALAAMRESLSASTVTAAHVEAARNRVRPS 729



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/280 (36%), Positives = 151/280 (53%), Gaps = 29/280 (10%)

Query: 371 ETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSK-EYAILKDIIIS 429
           ET         A  + +R  T+  + +E  +V       +  +GGL + +  + + ++  
Sbjct: 451 ETPTVAMADFTAALEVVRPTTMSASTLELASVT------LDDVGGLHEVKQTLTESVLWP 504

Query: 430 SSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESE 489
            +   T + LG+ P +GVLL+GPPG GKT L    A     N+ +V G E++S+  GESE
Sbjct: 505 LTYPDTFARLGVTPPRGVLLYGPPGCGKTYLVTALAGSGRANVLSVKGAELLSKWVGESE 564

Query: 490 QALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDG 546
           +A+ E+F  A Q+AP +VF+DE+DA+AP R    DGG   + R+VA LL  +DGV     
Sbjct: 565 RAVRELFRRARQAAPTLVFLDEVDALAPVRGQATDGGT--TDRVVAALLTELDGVEALRN 622

Query: 547 VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS 606
           V+V+ ATNRP+ ++PAL RPGRL+R        ++    + PA       R EIL A  S
Sbjct: 623 VVVVGATNRPELVDPALLRPGRLER-------LVYVPPPDGPA-------RTEILRA--S 666

Query: 607 GMEHSLL-DSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             +  L  D +++ L     GF  AD AAL  EAAL  +R
Sbjct: 667 ARDVPLAPDVDLDALGGELDGFSAADCAALIREAALAAMR 706



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 11/252 (4%)

Query: 775  EDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAG 834
            +++ G R    +L E ++    H+E   R+GT    G+L+ GP G  K+ + RAVA++ G
Sbjct: 232  DELPGLRAQAEELTELLDLGFHHREVLGRLGTTVSLGVLVEGPAGSGKSALVRAVAAKVG 291

Query: 835  LNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS 894
                 +  PEL +     + + +R   +  RA  P+++   +++ +A      +D     
Sbjct: 292  AGVRPLWAPELAALSNDAAARRLREAASAVRAGGPAVLLVTDVESIA-----PADEPGPL 346

Query: 895  DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIF 954
              V  Q++ E      R    V+  + RP+ +DPAL  P      + V  P+   R E  
Sbjct: 347  ATVFRQVVAE----TLRAGAAVVCTSGRPEAVDPALRGPDLLALRITVPLPDAALRREQL 402

Query: 955  RIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--EENLDASRITMQHLKT 1012
             +  R++P + DV + E+A  + G   AD++ + REA + A   ++  +   + M     
Sbjct: 403  TVLTREVPLAGDVRLDEVAARTPGFVAADLAALVREAGVRAALRQKTAETPTVAMADFTA 462

Query: 1013 AIRHVQPSEIHS 1024
            A+  V+P+ + +
Sbjct: 463  ALEVVRPTTMSA 474



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 33/252 (13%)

Query: 409 DISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           D+ +L GL  +   L +++ +    +  L  LG   + GVL+ GP G+GK++L R  A  
Sbjct: 230 DVDELPGLRAQAEELTELLDLGFHHREVLGRLGTTVSLGVLVEGPAGSGKSALVRAVAAK 289

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
            G  +  +  PE+ + +   + + L E   +     PAV+ + ++++IAPA + G     
Sbjct: 290 VGAGVRPLWAPELAALSNDAAARRLREAASAVRAGGPAVLLVTDVESIAPADEPG----- 344

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
              +AT+   +       G  V+  + RP++++PALR P  L   I + +          
Sbjct: 345 --PLATVFRQVVAETLRAGAAVVCTSGRPEAVDPALRGPDLLALRITVPL---------- 392

Query: 588 PAAVPSPAQRLEILHAL-----LSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALV 642
               P  A R E L  L     L+G      D  ++ ++  T GFV ADLAAL  EA + 
Sbjct: 393 ----PDAALRREQLTVLTREVPLAG------DVRLDEVAARTPGFVAADLAALVREAGVR 442

Query: 643 CLRRYSKIQTSS 654
              R    +T +
Sbjct: 443 AALRQKTAETPT 454


>gi|383782882|ref|YP_005467449.1| putative microtubule-severing ATPase [Actinoplanes missouriensis 431]
 gi|381376115|dbj|BAL92933.1| putative microtubule-severing ATPase [Actinoplanes missouriensis 431]
          Length = 730

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 132/274 (48%), Positives = 183/274 (66%), Gaps = 1/274 (0%)

Query: 747  LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 806
            + DFE A   VRP++M E  LEV +V  +DVG   EVK  L E+V WP  + + F R+G 
Sbjct: 440  MADFEAALDVVRPTSMAESTLEVAEVTLDDVGDMAEVKQTLTESVLWPLTYPDTFARLGV 499

Query: 807  RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 866
             PP G+L++GPPGC KT + +A+A     N L+VKG EL SKWVG+SE+AVR LF +AR 
Sbjct: 500  SPPRGVLLYGPPGCGKTYLVKAIAGTGKANVLSVKGAELLSKWVGDSERAVRELFRRARE 559

Query: 867  NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 926
             AP+++F DE+D LA  RG+ +DG   +DRV++ LL ELDG+    NV VI ATNRPD I
Sbjct: 560  AAPTLVFLDEVDALAPTRGQATDG-GTADRVVAALLTELDGVEDLRNVVVIGATNRPDLI 618

Query: 927  DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 986
            DPALLRPGR +RL+YV PP+   R  I R   R +P  + V++ EL    EG + AD + 
Sbjct: 619  DPALLRPGRLERLVYVPPPDGEARAAILRASARAVPLDASVDLDELGAELEGFSAADCAA 678

Query: 987  ICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            + RE+A++A+ ++L+AS +T  ++ TA + V+ S
Sbjct: 679  LIRESALAAMRDSLEASTVTAANVATARKRVRAS 712



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/270 (37%), Positives = 146/270 (54%), Gaps = 44/270 (16%)

Query: 386 SLREGTLPNAQIEFQNV--QATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRP 443
           S+ E TL  A++   +V   A V+Q +++             ++   +   T + LG+ P
Sbjct: 454 SMAESTLEVAEVTLDDVGDMAEVKQTLTE------------SVLWPLTYPDTFARLGVSP 501

Query: 444 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 503
            +GVLL+GPPG GKT L +  A     N+ +V G E++S+  G+SE+A+ E+F  A ++A
Sbjct: 502 PRGVLLYGPPGCGKTYLVKAIAGTGKANVLSVKGAELLSKWVGDSERAVRELFRRAREAA 561

Query: 504 PAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           P +VF+DE+DA+AP R    DGG   + R+VA LL  +DGV     V+VI ATNRPD I+
Sbjct: 562 PTLVFLDEVDALAPTRGQATDGGT--ADRVVAALLTELDGVEDLRNVVVIGATNRPDLID 619

Query: 561 PALRRPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
           PAL RPGRL+R + +   D     ++L+ S  AVP                    LD+ V
Sbjct: 620 PALLRPGRLERLVYVPPPDGEARAAILRASARAVP--------------------LDASV 659

Query: 618 EY--LSMATHGFVGADLAALCNEAALVCLR 645
           +   L     GF  AD AAL  E+AL  +R
Sbjct: 660 DLDELGAELEGFSAADCAALIRESALAAMR 689



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 15/254 (5%)

Query: 775  EDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAG 834
            +D+ G R    +L E ++    H E   R+GT+   G+L+ GP G  K+ + +AV +  G
Sbjct: 211  DDLPGLRPQAKELEELLDLGFNHGEVLARLGTKVTLGVLISGPSGSGKSALVQAVGAAVG 270

Query: 835  LNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS 894
             +   V  PEL +     +   +R L  + R   P+++   +++ LA    +E  G   +
Sbjct: 271  ASVRGVWAPELAALTNNAAAARLRELSQEVRGKTPAVLLISDVEALAP---REEPGPIST 327

Query: 895  DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIF 954
              V  Q+L E           V+  T++P+ +DP L  P      L V  P+   R E  
Sbjct: 328  --VFRQVLAE----TVAAGAAVVCTTSKPESVDPVLRAPDLLAVQLTVPLPDAAMRREQL 381

Query: 955  RIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL------DASRITMQ 1008
                R +P + DV + ++A  + G   AD+  + REA + A   ++      DA  +TM 
Sbjct: 382  AALTRGMPLAEDVRLDDVAGRTPGFVAADLGALTREAGVRAALRHVGNGTGPDAPTVTMA 441

Query: 1009 HLKTAIRHVQPSEI 1022
              + A+  V+P+ +
Sbjct: 442  DFEAALDVVRPTSM 455



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 151/349 (43%), Gaps = 36/349 (10%)

Query: 397 IEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGT 455
           +E   V  T   ++  L GL  +   L++++ +  +    L+ LG + T GVL+ GP G+
Sbjct: 197 VESVPVMTTEAPNLDDLPGLRPQAKELEELLDLGFNHGEVLARLGTKVTLGVLISGPSGS 256

Query: 456 GKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAI 515
           GK++L +      G ++  V  PE+ +     +   L E+        PAV+ I +++A+
Sbjct: 257 GKSALVQAVGAAVGASVRGVWAPELAALTNNAAAARLRELSQEVRGKTPAVLLISDVEAL 316

Query: 516 APARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI 575
           AP  + G        ++T+   +       G  V+  T++P+S++P LR P  L  ++ +
Sbjct: 317 APREEPG-------PISTVFRQVLAETVAAGAAVVCTTSKPESVDPVLRAPDLLAVQLTV 369

Query: 576 DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 635
            +              P  A R E L AL  GM  +  D  ++ ++  T GFV ADL AL
Sbjct: 370 PL--------------PDAAMRREQLAALTRGMPLA-EDVRLDDVAGRTPGFVAADLGAL 414

Query: 636 CNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDS--DCSRNITESSRDCLDS 693
             EA +    R+    T  D    T T+ +FE   D +   S  + +  + E + D +  
Sbjct: 415 TREAGVRAALRHVGNGTGPD--APTVTMADFEAALDVVRPTSMAESTLEVAEVTLDDVGD 472

Query: 694 ASPCTSDLPTSLLSSSLPLRGTVSEIADNFHN-GVSDSSGGMFMSEKGC 741
            +     L  S+L    PL        D F   GVS   G +     GC
Sbjct: 473 MAEVKQTLTESVL---WPL-----TYPDTFARLGVSPPRGVLLYGPPGC 513


>gi|224140199|ref|XP_002323472.1| predicted protein [Populus trichocarpa]
 gi|222868102|gb|EEF05233.1| predicted protein [Populus trichocarpa]
          Length = 802

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 126/244 (51%), Positives = 173/244 (70%), Gaps = 1/244 (0%)

Query: 759  PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
            PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P  G+L +GPP
Sbjct: 465  PSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPP 524

Query: 819  GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
            GC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP ++FFDE+D
Sbjct: 525  GCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELD 584

Query: 879  GLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
             +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDPALLRPGR D
Sbjct: 585  SIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLD 644

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            +L+Y+  P+E  R +IF+  LRK P S DV++R LA  ++G +GADI+ IC+ A   AI 
Sbjct: 645  QLIYIPLPDEESRFQIFKSCLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 704

Query: 998  ENLD 1001
            EN++
Sbjct: 705  ENIE 708



 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 166/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H KTA+    PS + 
Sbjct: 442  DAEILNSMAVTDEHFKTALGISNPSALR 469



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 103/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLRIHTKNMKLA-EDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMTAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  + L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEESRFQIFKSCLRKSPVS 671

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 672 -KDVDLRALAKYTQGFSGADITEICQRACKYAIR 704


>gi|354546205|emb|CCE42934.1| hypothetical protein CPAR2_205770 [Candida parapsilosis]
          Length = 758

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 131/278 (47%), Positives = 195/278 (70%), Gaps = 4/278 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            + + L D  +A  ++RPSAMRE+ LE+PKV W D+GGQ E+K +L+E V+ P +   +F 
Sbjct: 459  ITVTLDDVYEALGEIRPSAMREIFLEMPKVYWSDIGGQEELKKKLVEVVQLPLEASASFA 518

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            ++G   P G+L++GPPGCSKTL A+A+A+E+GLNFLA+KGPE+F+K+VGESE+ +R +F 
Sbjct: 519  KLGVNAPKGVLLYGPPGCSKTLTAKALATESGLNFLAIKGPEIFNKYVGESERTIREIFR 578

Query: 863  KARANAPSIIFFDEIDGLAAIR---GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAA 919
            KARA APSIIF DEID +A+ R   G      + S  V++ LL E+DG+ +   V +I A
Sbjct: 579  KARAAAPSIIFLDEIDAIASNRDGDGDGGTTTTASKNVLTSLLNEIDGVEELKGVVIIGA 638

Query: 920  TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 979
            TN+P +ID ALLRPGR DR +YV PP+   R +I     RK     DV++ + A L+EGC
Sbjct: 639  TNKPTEIDSALLRPGRLDRHIYVAPPDYEARLQILTKCCRKFNL-VDVDLGQYAKLTEGC 697

Query: 980  TGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 1017
            +GA+++L+C+EA ++AI E+ +A  +  +H + A++ +
Sbjct: 698  SGAEVTLLCQEAGLNAIMEDRNAQHVENRHFEHALQGI 735



 Score =  189 bits (481), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 99/241 (41%), Positives = 149/241 (61%), Gaps = 19/241 (7%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S++GGL+K+  +LK  I       TL S  G+ P +G+LL+GPPGTGKT L R  A+D  
Sbjct: 222 SQVGGLAKQTNLLKSTIELPLHNPTLFSDFGISPPRGILLYGPPGTGKTMLLRCAANDIN 281

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQ 528
            ++ T+NGP +VS+  GE+E A+ E+F+ A+   P+++F+DE+D++ P+R  D   E   
Sbjct: 282 AHILTINGPSIVSKYLGETENAIREIFEEAALFQPSIIFMDEIDSLVPSRNSDDSGETES 341

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           R+VATLL +MDG+  +  ++V+ ATNRP+SI+ ALRRPGR D+EIEI             
Sbjct: 342 RVVATLLTMMDGMDNSGRIVVVGATNRPNSIDIALRRPGRFDQEIEI------------- 388

Query: 589 AAVPSPAQRLEILHALLSGM---EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             +P    R +IL      M   ++ L + ++  ++  THG+VGADL ALC EA +  + 
Sbjct: 389 -GIPDVEARQDILQKQFDKMNKNKYVLTEEDIATVATKTHGYVGADLTALCREAVMKAIN 447

Query: 646 R 646
           R
Sbjct: 448 R 448



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 150/275 (54%), Gaps = 12/275 (4%)

Query: 756  KVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMF 815
            + +PS  +  +L  P   +  VGG  +    L   +E P  +   F   G  PP GIL++
Sbjct: 204  ETQPSITKYPLLPHPPT-FSQVGGLAKQTNLLKSTIELPLHNPTLFSDFGISPPRGILLY 262

Query: 816  GPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFD 875
            GPPG  KT++ R  A++   + L + GP + SK++GE+E A+R +F +A    PSIIF D
Sbjct: 263  GPPGTGKTMLLRCAANDINAHILTINGPSIVSKYLGETENAIREIFEEAALFQPSIIFMD 322

Query: 876  EIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGR 935
            EID L   R  +  G + S RV++ LL  +DG+     + V+ ATNRP+ ID AL RPGR
Sbjct: 323  EIDSLVPSRNSDDSGETES-RVVATLLTMMDGMDNSGRIVVVGATNRPNSIDIALRRPGR 381

Query: 936  FDRLLYVGPPNETDREEIFRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREA 991
            FD+ + +G P+   R++I +    K+  +  V    +I  +A  + G  GAD++ +CREA
Sbjct: 382  FDQEIEIGIPDVEARQDILQKQFDKMNKNKYVLTEEDIATVATKTHGYVGADLTALCREA 441

Query: 992  AISAIEENLDAS------RITMQHLKTAIRHVQPS 1020
             + AI   LD         +T+  +  A+  ++PS
Sbjct: 442  VMKAINRGLDNGTPQDEITVTLDDVYEALGEIRPS 476



 Score =  140 bits (352), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 21/213 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           ++ + LG+   KGVLL+GPPG  KT  A+  A +SG+N   + GPE+ ++  GESE+ + 
Sbjct: 515 ASFAKLGVNAPKGVLLYGPPGCSKTLTAKALATESGLNFLAIKGPEIFNKYVGESERTIR 574

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKDGGEEL-----SQRMVATLLNLMDGVCRTDGVL 548
           E+F  A  +AP+++F+DE+DAIA  R   G+       S+ ++ +LLN +DGV    GV+
Sbjct: 575 EIFRKARAAAPSIIFLDEIDAIASNRDGDGDGGTTTTASKNVLTSLLNEIDGVEELKGVV 634

Query: 549 VIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
           +I ATN+P  I+ AL RPGRLDR I +              A P    RL+IL       
Sbjct: 635 IIGATNKPTEIDSALLRPGRLDRHIYV--------------APPDYEARLQILTKCCR-- 678

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
           + +L+D ++   +  T G  GA++  LC EA L
Sbjct: 679 KFNLVDVDLGQYAKLTEGCSGAEVTLLCQEAGL 711


>gi|357510743|ref|XP_003625660.1| Cell division cycle protein-like protein [Medicago truncatula]
 gi|355500675|gb|AES81878.1| Cell division cycle protein-like protein [Medicago truncatula]
          Length = 653

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 124/244 (50%), Positives = 172/244 (70%), Gaps = 1/244 (0%)

Query: 759  PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
            PSA+RE ++EVP   W+D+GG   VK +L E V++P +H E F++ G  P  G+L +GPP
Sbjct: 310  PSALRETVVEVPNCSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPP 369

Query: 819  GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
            GC KTL+A+A+A+E   NF+++KGPEL + W GESE  VR +F KAR +AP ++FFDE+D
Sbjct: 370  GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELD 429

Query: 879  GLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
             +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDPALLRPGR D
Sbjct: 430  SIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLD 489

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            +L+Y+  P+E  R +IF+  LRK P S DV+IR LA  ++G +GADI+ IC+ A   AI 
Sbjct: 490  QLIYIPLPDEDSRHQIFKACLRKSPISKDVDIRALAKYTQGFSGADITEICQRACKYAIR 549

Query: 998  ENLD 1001
            EN++
Sbjct: 550  ENIE 553



 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 105/265 (39%), Positives = 149/265 (56%), Gaps = 34/265 (12%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 66   EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 125

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 126  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 184

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATN+ D                 +G P+E  R
Sbjct: 185  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNKID-----------------IGVPDEVGR 226

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++ +++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 227  LEVLRIHTKNMKLAEDVDLEKISKETHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 286

Query: 1002 ------ASRITMQHLKTAIRHVQPS 1020
                  +  +T +H  TA+    PS
Sbjct: 287  DAEILNSMAVTNEHFATALGSSNPS 311



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 178/344 (51%), Gaps = 51/344 (14%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 72  VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 131

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 132 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 191

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATN+ D                                 V
Sbjct: 192 SQLLTLMDGLKSRAHVIVMGATNKID-------------------------------IGV 220

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
           P    RLE+L      M+ +  D ++E +S  THG+VGADLAALC EAAL C+R    + 
Sbjct: 221 PDEVGRLEVLRIHTKNMKLA-EDVDLEKISKETHGYVGADLAALCTEAALQCIREKMDVI 279

Query: 651 -----QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
                   +++L+S     E   H  T L  S+ S     + R+ +     C+ D    L
Sbjct: 280 DLEDETIDAEILNSMAVTNE---HFATALGSSNPS-----ALRETVVEVPNCSWDDIGGL 331

Query: 706 LSSSLPLRGTVS---EIADNFHN-GVSDSSGGMFMSEKGCALKL 745
            +    L+ TV    E  + F   G+S S G +F    GC   L
Sbjct: 332 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 375



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 116/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  ++ GPE+++  +GESE  + E+
Sbjct: 352 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 411

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A  SAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 412 FDKARGSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 470

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 471 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRHQIFKACLRKSPIS 516

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 517 -KDVDIRALAKYTQGFSGADITEICQRACKYAIR 549


>gi|336093313|gb|AEI01159.1| cell division cycle protein 48 [Zea mays]
          Length = 768

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 137/307 (44%), Positives = 195/307 (63%), Gaps = 10/307 (3%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 459  FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 518

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 519  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 578

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 579  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 638

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 639  ALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEIC 698

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++      +  K     ++  E+    E+ A       K+ R   S ++
Sbjct: 699  QRACKYAIRENIEKDIERERRRKDNPEAMEEDEVDEIAEIRAPHFEESMKYAR--RSVSD 756

Query: 1042 ADESGYQ 1048
            AD   YQ
Sbjct: 757  ADIRKYQ 763



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 207  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 266

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G
Sbjct: 267  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG 325

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 326  -EVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 384

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DVN+  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 385  LEVLRIHTKNMKLAEDVNLELISKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETI 444

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H KTA+    PS + 
Sbjct: 445  DAEILNSMAVTNDHFKTALGTSNPSALR 472



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 155/239 (64%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 213 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 272

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 273 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 332

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 333 SQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 378

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  D  +E +S  THG+VGADLAALC EAAL C+R    I
Sbjct: 379 PDEVGRLEVLRIHTKNMKLA-EDVNLELISKDTHGYVGADLAALCTEAALQCIREKMDI 436



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 510 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 569

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 570 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 628

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P    RL+I  A L     +
Sbjct: 629 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDEQSRLQIFKACLRKSPVA 674

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 675 -KDVDLNALAKYTQGFSGADITEICQRACKYAIR 707


>gi|115450773|ref|NP_001048987.1| Os03g0151800 [Oryza sativa Japonica Group]
 gi|108706222|gb|ABF94017.1| Cell division cycle protein 48, putative, expressed [Oryza sativa
            Japonica Group]
 gi|113547458|dbj|BAF10901.1| Os03g0151800 [Oryza sativa Japonica Group]
 gi|125542437|gb|EAY88576.1| hypothetical protein OsI_10049 [Oryza sativa Indica Group]
 gi|125584947|gb|EAZ25611.1| hypothetical protein OsJ_09438 [Oryza sativa Japonica Group]
 gi|215704352|dbj|BAG93786.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704409|dbj|BAG93843.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704637|dbj|BAG94265.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704711|dbj|BAG94339.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 809

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 201/323 (62%), Gaps = 15/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 458  FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 517

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 518  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 577

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 578  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 637

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P++  R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 638  ALLRPGRLDQLIYIPLPDDQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEIC 697

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++      +  K     ++  E+    E+ A       K+ R   S ++
Sbjct: 698  QRACKYAIRENIEKDIEMEKRRKDNPEAMEEDEVDDIAEIKAAHFEESMKYAR--RSVSD 755

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+  G+  
Sbjct: 756  ADIRKYQAFAQTLQQSRGFGTEF 778



 Score =  229 bits (583), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 162/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 206  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 265

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 266  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 324

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 325  -EVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 383

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 384  LEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETI 443

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H KTA+    PS + 
Sbjct: 444  DAEILNSMAVTNDHFKTALGTSNPSALR 471



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/239 (43%), Positives = 157/239 (65%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 212 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 271

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 272 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 331

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 332 SQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 377

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  D ++E+++  THG+VGADLAALC EAAL C+R    I
Sbjct: 378 PDEVGRLEVLRIHTKNMKLA-EDVDLEHIAKDTHGYVGADLAALCTEAALQCIREKMDI 435



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 509 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 568

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 569 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 627

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P    RL+I  A L     +
Sbjct: 628 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDDQSRLQIFKACLRKSPVA 673

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 674 -KDVDLNALAKYTQGFSGADITEICQRACKYAIR 706


>gi|413957019|gb|AFW89668.1| hypothetical protein ZEAMMB73_027527 [Zea mays]
          Length = 804

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 201/323 (62%), Gaps = 15/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H + F++ G  P 
Sbjct: 457  FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPDKFEKFGMSPS 516

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 517  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 576

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 577  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 636

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 637  ALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLHALAKYTQGFSGADITEIC 696

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKEL-------SAKFQRLVHSNAE 1041
            + A   AI EN++      +  K     ++  E+    E+       S K+ R   S ++
Sbjct: 697  QRACKYAIRENIEKDIERERRRKDNPEAMEEDEVDDIAEIMAAHFEESMKYAR--RSVSD 754

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+  GS  
Sbjct: 755  ADIRKYQAFAQTLQQSRGFGSEF 777



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 162/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL+FGPPG  KTL+ARAVA
Sbjct: 205  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLFGPPGSGKTLIARAVA 264

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 265  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 323

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 324  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 382

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 383  LEVLRIHTKNMKLAEDVDLELIAKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETI 442

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  ++  H KTA+    PS + 
Sbjct: 443  DAEILNSMAVSNDHFKTALGTSNPSALR 470



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/239 (43%), Positives = 155/239 (64%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL GPPG+GKT +AR  A+++G  
Sbjct: 211 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLFGPPGSGKTLIARAVANETGAF 270

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 271 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 330

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 331 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 376

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R    I
Sbjct: 377 PDEVGRLEVLRIHTKNMKLA-EDVDLELIAKDTHGYVGADLAALCTEAALQCIREKMDI 434



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 508 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 567

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 568 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 626

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P    RL+I  A L     +
Sbjct: 627 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDEQSRLQIFKACLRKSPVA 672

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 673 -KDVDLHALAKYTQGFSGADITEICQRACKYAIR 705


>gi|413934135|gb|AFW68686.1| hypothetical protein ZEAMMB73_070374 [Zea mays]
          Length = 845

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 201/321 (62%), Gaps = 15/321 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 459  FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 518

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 519  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 578

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 579  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 638

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 639  ALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEIC 698

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++      +  K     ++  E+    E+ A       K+ R   S ++
Sbjct: 699  QRACKYAIRENIEKDIERERRRKDNPEAMEEDEVDEIAEIRAPHFEESMKYAR--RSVSD 756

Query: 1042 ADESGYQ-----LRPSKSIGS 1057
            AD   YQ     L+ S+  G+
Sbjct: 757  ADIRKYQAFAQTLQQSRGFGT 777



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 207  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 266

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G
Sbjct: 267  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG 325

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 326  -EVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 384

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DVN+  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 385  LEVLRIHTKNMKLAEDVNLELISKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETI 444

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H KTA+    PS + 
Sbjct: 445  DAEILNSMAVTNDHFKTALGTSNPSALR 472



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 155/239 (64%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 213 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 272

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 273 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 332

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 333 SQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 378

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  D  +E +S  THG+VGADLAALC EAAL C+R    I
Sbjct: 379 PDEVGRLEVLRIHTKNMKLA-EDVNLELISKDTHGYVGADLAALCTEAALQCIREKMDI 436



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 510 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 569

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 570 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 628

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    RL+I  A L     +
Sbjct: 629 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEQSRLQIFKACLRKSPVA 674

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 675 -KDVDLNALAKYTQGFSGADITEICQRACKYAIR 707


>gi|407462320|ref|YP_006773637.1| ATPase AAA [Candidatus Nitrosopumilus koreensis AR1]
 gi|407045942|gb|AFS80695.1| ATPase AAA [Candidatus Nitrosopumilus koreensis AR1]
          Length = 711

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 133/286 (46%), Positives = 191/286 (66%), Gaps = 7/286 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            +K+   DF  A  +VRPSA+REV++++P V W+DVGG  ++K +L EA+EWP K+++AF 
Sbjct: 424  IKITSKDFTDALKEVRPSALREVLVQIPNVSWDDVGGLDKLKEELREAIEWPLKYKDAFD 483

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
                + P G+L++GPPG  KTL+A+AVA+    NF+++KGPEL SKWVGESEK VR +F 
Sbjct: 484  YAHVKTPKGVLLYGPPGTGKTLIAKAVATTTESNFISIKGPELLSKWVGESEKGVREIFR 543

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP IIFFDEID L   RG       V++ V+SQ+L E+DGL +  NV +I ATNR
Sbjct: 544  KARMAAPCIIFFDEIDALVPKRGSGGSDSHVTENVVSQILTEIDGLEELNNVLIIGATNR 603

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             D +DPALLRPGRFDR++ V  P+    E I +IH +  P + DVN++ LA +S+G +GA
Sbjct: 604  LDIVDPALLRPGRFDRVIEVPNPDVAGIEMILKIHTKDKPLAEDVNLKTLAEMSKGFSGA 663

Query: 983  DISLICREAAISAIE---ENLDAS----RITMQHLKTAIRHVQPSE 1021
            +I  +C   A+  ++   EN D      +IT + L+ +I  +  ++
Sbjct: 664  EIEEVCNRGALLGVKRFVENKDKDVKSIKITQKDLEYSINEINKTK 709



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/267 (41%), Positives = 169/267 (63%), Gaps = 17/267 (6%)

Query: 769  VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
            +P++ ++++GG +    ++ E VE P +H E F++IG   P G+L++GPPG  KTL+A+A
Sbjct: 177  IPRITYDELGGLKNEILKIREMVELPMRHPELFEKIGISSPKGVLLYGPPGTGKTLLAKA 236

Query: 829  VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
            VA E   +F ++ GPE+ +K  GESE+ +R +F +A  NAPSIIF DEID +A  R +E 
Sbjct: 237  VAGETNSHFTSLSGPEIMAKHYGESEEKLREIFTQAEENAPSIIFIDEIDSIAPKR-EEV 295

Query: 889  DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
             G  +  R++SQLL  +DG+  R  V VIAATNRPD IDPAL RPGRFDR + +G P+E 
Sbjct: 296  SG-ELEKRIVSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEIGIPDED 354

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI------------ 996
             R E+  IH R +P    V++++++  + G  GAD+ ++C+EAA+ ++            
Sbjct: 355  GRLEVLNIHTRGMPLDKKVDLKKISKTTHGFVGADLEVLCKEAAMRSLRRILPEINLEEE 414

Query: 997  ---EENLDASRITMQHLKTAIRHVQPS 1020
               +E L   +IT +    A++ V+PS
Sbjct: 415  KVSKEVLQKIKITSKDFTDALKEVRPS 441



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/238 (45%), Positives = 155/238 (65%), Gaps = 20/238 (8%)

Query: 412 KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGV 470
           +LGGL  E   +++++ +          +G+   KGVLL+GPPGTGKT LA+  A ++  
Sbjct: 184 ELGGLKNEILKIREMVELPMRHPELFEKIGISSPKGVLLYGPPGTGKTLLAKAVAGETNS 243

Query: 471 NLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRM 530
           +  +++GPE+++++YGESE+ L E+F  A ++AP+++FIDE+D+IAP R++   EL +R+
Sbjct: 244 HFTSLSGPEIMAKHYGESEEKLREIFTQAEENAPSIIFIDEIDSIAPKREEVSGELEKRI 303

Query: 531 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAA 590
           V+ LL LMDG+     V+VIAATNRPDSI+PALRRPGR DREIEI               
Sbjct: 304 VSQLLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEI--------------G 349

Query: 591 VPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLRR 646
           +P    RLE+L+    GM    LD +V+   +S  THGFVGADL  LC EAA+  LRR
Sbjct: 350 IPDEDGRLEVLNIHTRGMP---LDKKVDLKKISKTTHGFVGADLEVLCKEAAMRSLRR 404



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 136/239 (56%), Gaps = 20/239 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K    L++ I      K       ++  KGVLL+GPPGTGKT +A+  A  +  N
Sbjct: 458 VGGLDKLKEELREAIEWPLKYKDAFDYAHVKTPKGVLLYGPPGTGKTLIAKAVATTTESN 517

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
             ++ GPE++S+  GESE+ + E+F  A  +AP ++F DE+DA+ P R  GG +  +++ 
Sbjct: 518 FISIKGPELLSKWVGESEKGVREIFRKARMAAPCIIFFDEIDALVPKRGSGGSDSHVTEN 577

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ +L  +DG+   + VL+I ATNR D ++PAL RPGR DR IE               
Sbjct: 578 VVSQILTEIDGLEELNNVLIIGATNRLDIVDPALLRPGRFDRVIE--------------- 622

Query: 590 AVPSP-AQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            VP+P    +E++  + +  +    D  ++ L+  + GF GA++  +CN  AL+ ++R+
Sbjct: 623 -VPNPDVAGIEMILKIHTKDKPLAEDVNLKTLAEMSKGFSGAEIEEVCNRGALLGVKRF 680


>gi|219129668|ref|XP_002185005.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403500|gb|EEC43452.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 552

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/299 (48%), Positives = 191/299 (63%), Gaps = 18/299 (6%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D   A    +PS ++ V +E+PKV W  +GG   VK +L EA+E P  H + F ++G  P
Sbjct: 251  DLSTAIRATKPSIIKSVTVEIPKVLWSSIGGMESVKRELREAIEMPLTHSDLFIKLGIPP 310

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPGCSKTLMARA+A+E  +NFLAVKGPEL SKW+GESE+A+ SLF +AR  +
Sbjct: 311  PRGILLYGPPGCSKTLMARALATEGHMNFLAVKGPELLSKWLGESERALASLFKRARMAS 370

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN-----VTVIAATNRP 923
            PSI+FFDEID +A+ RG  +   S S R++SQLL ELDG+   V      V V+ ATNRP
Sbjct: 371  PSIVFFDEIDAIASKRG--AGDSSSSGRLLSQLLTELDGVTNTVGNTKQRVVVVGATNRP 428

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELAC--LSEGCTG 981
            D +D AL RPGR DR++YVG P+   R  IF+I L +  CS DV+I  LA   +++G +G
Sbjct: 429  DILDSALTRPGRIDRMIYVGVPDSDTRVRIFQITLAEKSCSQDVDIEHLARDDVTQGFSG 488

Query: 982  ADISLICREAAISAIEENLDAS-----RITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
            A+   ICR+AA+ A+EE  D       +I MQHL  A     R + P  I  Y     K
Sbjct: 489  AECVAICRDAALLALEEIEDTGEDIIPQIRMQHLLEAAGGMKRQITPQMIEFYASFREK 547



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/242 (38%), Positives = 134/242 (55%), Gaps = 23/242 (9%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG+      L++ I      S L   LG+ P +G+LL+GPPG  KT +AR  A +  
Sbjct: 277 SSIGGMESVKRELREAIEMPLTHSDLFIKLGIPPPRGILLYGPPGCSKTLMARALATEGH 336

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
           +N   V GPE++S+  GESE+AL  +F  A  ++P++VF DE+DAIA  R  G    S R
Sbjct: 337 MNFLAVKGPELLSKWLGESERALASLFKRARMASPSIVFFDEIDAIASKRGAGDSSSSGR 396

Query: 530 MVATLLNLMDGVCRTDG-----VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
           +++ LL  +DGV  T G     V+V+ ATNRPD ++ AL RPGR+DR I +         
Sbjct: 397 LLSQLLTELDGVTNTVGNTKQRVVVVGATNRPDILDSALTRPGRIDRMIYV--------- 447

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSM--ATHGFVGADLAALCNEAALV 642
                 VP    R+ I    L+    S  D ++E+L+    T GF GA+  A+C +AAL+
Sbjct: 448 -----GVPDSDTRVRIFQITLAEKSCS-QDVDIEHLARDDVTQGFSGAECVAICRDAALL 501

Query: 643 CL 644
            L
Sbjct: 502 AL 503



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 124/259 (47%), Gaps = 31/259 (11%)

Query: 794  PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS--EAGLNFLAVKGPELFSK--W 849
            P    E F +   + P GIL+ GP G  K+ +AR +    E+ L+   V    L S+   
Sbjct: 11   PMLRPELFAKGSMKRPRGILLHGPSGVGKSSLARQLGEELESILHVQYVNCSSLQSQTSI 70

Query: 850  VGESEKAVRSLF--AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDG 907
            VGE+E+ +  LF  +        ++ FD+I  +   RG  + G   +D++ S LL  +DG
Sbjct: 71   VGEAERELSRLFRLSGTAKKQNRLLIFDDIHLICPRRGGYAPG---TDQLASTLLSLIDG 127

Query: 908  L----HQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE-TDREEIFRIHLR 959
            +     Q V+   + ++A T     +DPAL RPGR D  + V  P+E + R EI + HL 
Sbjct: 128  VDGSEDQEVSNEGLVLLAITTNASLLDPALRRPGRIDVEVEVPIPDEASTRAEILQFHLG 187

Query: 960  KI----PCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS----------RI 1005
            +     P  S  +   LA L++G  GAD  L  +EA  SAI  NL A+            
Sbjct: 188  QAGASPPAISSTDWISLAKLAKGFNGADCMLAMKEAIRSAILRNLKATVSREISSPPPNP 247

Query: 1006 TMQHLKTAIRHVQPSEIHS 1024
            T   L TAIR  +PS I S
Sbjct: 248  TFSDLSTAIRATKPSIIKS 266



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 127/253 (50%), Gaps = 35/253 (13%)

Query: 423 LKDIIISSSVKSTLSSLG-LRPTKGVLLHGPPGTGKTSLARLCAHD--SGVNLFTVNGPE 479
           ++ ++++  ++  L + G ++  +G+LLHGP G GK+SLAR    +  S +++  VN   
Sbjct: 4   IRQVLLTPMLRPELFAKGSMKRPRGILLHGPSGVGKSSLARQLGEELESILHVQYVNCSS 63

Query: 480 VVSQN--YGESEQALHEVF--DSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLL 535
           + SQ    GE+E+ L  +F     ++    ++  D++  I P R+ G    + ++ +TLL
Sbjct: 64  LQSQTSIVGEAERELSRLFRLSGTAKKQNRLLIFDDIHLICP-RRGGYAPGTDQLASTLL 122

Query: 536 NLMDGV-------CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
           +L+DGV          +G++++A T     ++PALRRPGR+D E+E+             
Sbjct: 123 SLIDGVDGSEDQEVSNEGLVLLAITTNASLLDPALRRPGRIDVEVEV------------- 169

Query: 589 AAVPSPAQ-RLEIL--HALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVC 643
             +P  A  R EIL  H   +G     + S  +++S+A    GF GAD      EA    
Sbjct: 170 -PIPDEASTRAEILQFHLGQAGASPPAISS-TDWISLAKLAKGFNGADCMLAMKEAIRSA 227

Query: 644 LRRYSKIQTSSDV 656
           + R  K   S ++
Sbjct: 228 ILRNLKATVSREI 240


>gi|399216181|emb|CCF72869.1| unnamed protein product [Babesia microti strain RI]
          Length = 773

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 135/288 (46%), Positives = 196/288 (68%), Gaps = 17/288 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D  +AR  + PS +RE+ +E+P  KW D+GG  +VK  L ++VEWP K ++   +   +P
Sbjct: 465  DLLEARKGLSPSGLREIYVEIPYTKWTDIGGYEDVKLLLKQSVEWPCKKKKILDKFAIKP 524

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL++GPPGCSKT+MARAVA+ + +NF+++KGPELFSKWVGESE+++R +F  ARAN+
Sbjct: 525  PRGILLYGPPGCSKTMMARAVATSSHMNFISIKGPELFSKWVGESERSIRQIFFIARANS 584

Query: 869  PSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 927
            P +IFFDEID +A  + ++S+GVS V +RV+SQLL E+DG++    + VI ATNRPD +D
Sbjct: 585  PCVIFFDEIDSIA--KSRQSEGVSEVGNRVLSQLLNEMDGINSTGELVVIGATNRPDVLD 642

Query: 928  PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNI----RELACLSEGCTGAD 983
            PALLRPGRFDRL+YV  P+   R+ I +I+L K+     + I     EL+  ++G +GA+
Sbjct: 643  PALLRPGRFDRLIYVKLPDLQARKHILKINLSKLSLDPSLEIDELVDELSYRTKGYSGAE 702

Query: 984  ISLICREAAI---------SAIEENLDASRITMQHLKTAIRHVQPSEI 1022
            I  ICRE+A+         S +E   + +++  Q    AI HV   +I
Sbjct: 703  IEAICRESALRSISQFISSSQVEHEPEDTKVDTQMCSIAI-HVTIDDI 749



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 129/213 (60%), Gaps = 18/213 (8%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K  L    ++P +G+LL+GPPG  KT +AR  A  S +N  ++ GPE+ S+  GESE+++
Sbjct: 514 KKILDKFAIKPPRGILLYGPPGCSKTMMARAVATSSHMNFISIKGPELFSKWVGESERSI 573

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
            ++F  A  ++P V+F DE+D+IA +R+ +G  E+  R+++ LLN MDG+  T  ++VI 
Sbjct: 574 RQIFFIARANSPCVIFFDEIDSIAKSRQSEGVSEVGNRVLSQLLNEMDGINSTGELVVIG 633

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS--GME 609
           ATNRPD ++PAL RPGR DR I + +              P    R  IL   LS   ++
Sbjct: 634 ATNRPDVLDPALLRPGRFDRLIYVKL--------------PDLQARKHILKINLSKLSLD 679

Query: 610 HSL-LDSEVEYLSMATHGFVGADLAALCNEAAL 641
            SL +D  V+ LS  T G+ GA++ A+C E+AL
Sbjct: 680 PSLEIDELVDELSYRTKGYSGAEIEAICRESAL 712



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 115/232 (49%), Gaps = 41/232 (17%)

Query: 445 KGVLLHGPPGTGKTSLARLCAH------------DSGVNLFTVNGPEVV--------SQN 484
           KGVLL GPPG GK+ +A+   H               +  F    PE++        S  
Sbjct: 246 KGVLLWGPPGCGKSFIAKHTYHLHTQGALKNWLKVDKLKEFECIPPEIILTSSTKLISDL 305

Query: 485 YGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRT 544
            G+S + + ++F + ++    V+FIDE+D IA +++D  + ++  +VA L  +   V   
Sbjct: 306 PGQSVKNITQLFHTRNKCG-KVIFIDEIDGIA-SKRDTNQNIAA-LVALLCEMDSCVNSN 362

Query: 545 DGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHAL 604
             + +I  TNRP+ ++ A+RRPGR D EI +               VP+ +QR E+L  L
Sbjct: 363 SDICIIGLTNRPNDLDSAIRRPGRFDSEIHV--------------GVPNSSQRFELLKGL 408

Query: 605 LSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDV 656
           LS + ++L D+E++ LS     FV ADL  L N+    CL   SK     D+
Sbjct: 409 LSEINYNLSDTEIKTLSDQCSAFVAADLKGLINK----CLTTKSKQYLQDDI 456



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 36/264 (13%)

Query: 787  LMEAVEW----PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA---VASEAGL-NFL 838
            L+  ++W    P  + E  K+       G+L++GPPGC K+ +A+    + ++  L N+L
Sbjct: 219  LLNFLKWHVFIPLSYPEFHKKNNINSAKGVLLWGPPGCGKSFIAKHTYHLHTQGALKNWL 278

Query: 839  AVKG--------PE--------LFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAA 882
             V          PE        L S   G+S K +  LF   R     +IF DEIDG+A+
Sbjct: 279  KVDKLKEFECIPPEIILTSSTKLISDLPGQSVKNITQLF-HTRNKCGKVIFIDEIDGIAS 337

Query: 883  IRGKESDGVSVSDRVMSQLLVELDG-LHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLY 941
             R    +  +     +  LL E+D  ++   ++ +I  TNRP+ +D A+ RPGRFD  ++
Sbjct: 338  KRDTNQNIAA-----LVALLCEMDSCVNSNSDICIIGLTNRPNDLDSAIRRPGRFDSEIH 392

Query: 942  VGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISA----I 996
            VG PN + R E+ +  L +I  + SD  I+ L+        AD+  +  +   +     +
Sbjct: 393  VGVPNSSQRFELLKGLLSEINYNLSDTEIKTLSDQCSAFVAADLKGLINKCLTTKSKQYL 452

Query: 997  EENLDASRITMQHLKTAIRHVQPS 1020
            ++++    IT   L  A + + PS
Sbjct: 453  QDDITDMIITFDDLLEARKGLSPS 476


>gi|391341434|ref|XP_003745035.1| PREDICTED: transitional endoplasmic reticulum ATPase TER94-like
            [Metaseiulus occidentalis]
          Length = 799

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 127/260 (48%), Positives = 182/260 (70%), Gaps = 1/260 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F  A  K  PSA+RE ++EVP V WED+GG   VK +L E +++P +H + F
Sbjct: 443  SLAVSMENFRWAMGKSSPSALRETVVEVPNVSWEDIGGLEGVKQELQEMIQYPVEHPDKF 502

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G  PP G+L +GPPGC KTL+A+A+A+E   NF+++KGPEL S W GESE  VR +F
Sbjct: 503  LKFGMSPPKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLSMWFGESESNVRDIF 562

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KARA AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 563  DKARAAAPCVLFFDELDSIAKSRGASVGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 622

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  R ++F+  LRK P + DV+I  LA ++ G +
Sbjct: 623  NRPDIIDPAILRPGRLDQLIYIPLPDEKSRMQVFKACLRKSPIAKDVDIGFLAKITSGFS 682

Query: 981  GADISLICREAAISAIEENL 1000
            GADI+ IC+ AA +AI E++
Sbjct: 683  GADITEICQRAAKTAISESI 702



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 108/231 (46%), Positives = 151/231 (65%), Gaps = 2/231 (0%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++D+GG R+    + E VE P +H   FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 199  EIGYDDIGGCRKQLALIKEMVELPLRHPSLFKTIGVKPPRGILLYGPPGTGKTLIARAVA 258

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DEID +A  R K    
Sbjct: 259  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKREKTHG- 317

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL QR +V V+AATNRP+ ID AL R GRFDR + +G P+ T R
Sbjct: 318  -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRFGRFDREVDIGIPDATGR 376

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
             E+ RIH + +  + DV++ ++A  + G  GAD++ +C EAA+  I E +D
Sbjct: 377  LEVLRIHTKNMKLADDVDLEKIAAETHGFVGADLAALCSEAALQQIREKMD 427



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 166/260 (63%), Gaps = 22/260 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A++K+++ +     S   ++G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 205 IGGCRKQLALIKEMVELPLRHPSLFKTIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 264

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDE+DAIAP R+    E+ +R+V
Sbjct: 265 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKREKTHGEVERRIV 324

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ +   V+V+AATNRP+SI+ ALRR GR DRE++I               +
Sbjct: 325 SQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRFGRFDREVDI--------------GI 370

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
           P    RLE+L      M+ +  D ++E ++  THGFVGADLAALC+EAAL  +R    + 
Sbjct: 371 PDATGRLEVLRIHTKNMKLA-DDVDLEKIAAETHGFVGADLAALCSEAALQQIREKMDVI 429

Query: 651 -----QTSSDVLHSTGTLFE 665
                Q  ++VL+S     E
Sbjct: 430 DLEDDQIDAEVLNSLAVSME 449



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 154/311 (49%), Gaps = 41/311 (13%)

Query: 344 ADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLRE----------GTLP 393
           A L +E +  Q+ E MD      VI+ E        LN+++ S+              L 
Sbjct: 411 AALCSEAALQQIREKMD------VIDLEDDQIDAEVLNSLAVSMENFRWAMGKSSPSALR 464

Query: 394 NAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPP 453
              +E  NV     +DI  L G+ +E   +    +    K      G+ P KGVL +GPP
Sbjct: 465 ETVVEVPNVSW---EDIGGLEGVKQELQEMIQYPVEHPDK--FLKFGMSPPKGVLFYGPP 519

Query: 454 GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
           G GKT LA+  A++   N  ++ GPE++S  +GESE  + ++FD A  +AP V+F DELD
Sbjct: 520 GCGKTLLAKAIANECQANFISIKGPELLSMWFGESESNVRDIFDKARAAAPCVLFFDELD 579

Query: 514 AIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
           +IA +R     D G   + R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRL
Sbjct: 580 SIAKSRGASVGDAGGA-ADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRL 638

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 629
           D+ I I               +P    R+++  A L     +  D ++ +L+  T GF G
Sbjct: 639 DQLIYI--------------PLPDEKSRMQVFKACLRKSPIA-KDVDIGFLAKITSGFSG 683

Query: 630 ADLAALCNEAA 640
           AD+  +C  AA
Sbjct: 684 ADITEICQRAA 694


>gi|224127332|ref|XP_002329251.1| predicted protein [Populus trichocarpa]
 gi|222870705|gb|EEF07836.1| predicted protein [Populus trichocarpa]
          Length = 776

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 138/308 (44%), Positives = 203/308 (65%), Gaps = 9/308 (2%)

Query: 759  PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
            PSA+RE I+EVP V+WED+GG  +VK +L E V++P +H E F++ G  P  G+L +GPP
Sbjct: 445  PSALRETIVEVPNVRWEDIGGLEKVKMELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPP 504

Query: 819  GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
            GC KTL+A+A+A+E   NF+++KGPEL + W GESE  VR +F KAR +AP +IFFDE+D
Sbjct: 505  GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVIFFDELD 564

Query: 879  GLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
             +A  RG    D    +DRV++QLL E+DGL  +  V +I ATNRPD IDPAL+RPGR D
Sbjct: 565  SIAIQRGNSVGDAGGAADRVLNQLLTEMDGLSAKKTVFIIGATNRPDIIDPALMRPGRLD 624

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            +L+Y+  P+E  R +IF+  LRK P S DV+++ LA  +EG +GADI+ IC+ A   A+ 
Sbjct: 625  QLIYIPLPDEGSRLQIFKACLRKSPVSKDVDLQVLAKHTEGFSGADITEICQRACKYAVR 684

Query: 998  ENLDAS-RITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQ-----LRP 1051
            E+++   +  ++ L+ ++         S+ E S ++ R   S +++D   YQ     L+ 
Sbjct: 685  EDIEKDIKRKIEGLEDSMEEGMTWLKVSHFEESMRYAR--KSVSDSDILKYQMFSQTLQQ 742

Query: 1052 SKSIGSNM 1059
            S+  GS+ 
Sbjct: 743  SRGFGSDF 750



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 110/267 (41%), Positives = 163/267 (61%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + ++D+GG R+    + E VE P +  + FK IG +PP GIL++GPPG  KTL+ARA+A+
Sbjct: 185  IGYDDLGGVRKQLALIREMVELPLRFPQLFKTIGVKPPRGILLYGPPGTGKTLIARAIAN 244

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE+ +R  F +A  NAP+I+F DEID +A  R  E  G 
Sbjct: 245  ETGAFFFCINGPEIMSKMAGESEQNLRKAFEEAEKNAPAIVFIDEIDSIAPKR--EKTGG 302

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DGL  R +V VI ATNRP+ +DPAL R GRFD+ + +G P+E  R 
Sbjct: 303  EVERRIVSQLLTLMDGLKARAHVIVIGATNRPNSLDPALRRFGRFDKEIDIGVPDEVGRL 362

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN------------ 999
            E+ R+H +K+  S DV++ ++A  ++G  GAD++ +C E+A+  I E             
Sbjct: 363  EVLRVHTKKMKLSEDVDLEKVAKGTQGYVGADLAALCSESALQCIREKMGIIDLEDDTID 422

Query: 1000 ---LDASRITMQHLKTAIRHVQPSEIH 1023
               L++  +T +H   A+    PS + 
Sbjct: 423  AEVLNSMAVTNEHFSIALGTSNPSALR 449



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 158/234 (67%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           LGG+ K+ A++++++ +         ++G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 190 LGGVRKQLALIREMVELPLRFPQLFKTIGVKPPRGILLYGPPGTGKTLIARAIANETGAF 249

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESEQ L + F+ A ++APA+VFIDE+D+IAP R+  G E+ +R+V
Sbjct: 250 FFCINGPEIMSKMAGESEQNLRKAFEEAEKNAPAIVFIDEIDSIAPKREKTGGEVERRIV 309

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+S++PALRR GR D+EI+I               V
Sbjct: 310 SQLLTLMDGLKARAHVIVIGATNRPNSLDPALRRFGRFDKEIDI--------------GV 355

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ S  D ++E ++  T G+VGADLAALC+E+AL C+R
Sbjct: 356 PDEVGRLEVLRVHTKKMKLS-EDVDLEKVAKGTQGYVGADLAALCSESALQCIR 408



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 129/239 (53%), Gaps = 23/239 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K    L++ +             G+ P+KGVL +GPPG GKT LA+  A++   N
Sbjct: 463 IGGLEKVKMELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 522

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD-----GGEEL 526
             ++ GPE+++  +GESE  + +VFD A QSAP V+F DELD+IA  R +     GG   
Sbjct: 523 FISIKGPELLTMWFGESEANVRDVFDKARQSAPCVIFFDELDSIAIQRGNSVGDAGGA-- 580

Query: 527 SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKN 586
           + R++  LL  MDG+     V +I ATNRPD I+PAL RPGRLD+ I I           
Sbjct: 581 ADRVLNQLLTEMDGLSAKKTVFIIGATNRPDIIDPALMRPGRLDQLIYI----------- 629

Query: 587 SPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
               +P    RL+I  A L     S  D +++ L+  T GF GAD+  +C  A    +R
Sbjct: 630 ---PLPDEGSRLQIFKACLRKSPVS-KDVDLQVLAKHTEGFSGADITEICQRACKYAVR 684


>gi|374262843|ref|ZP_09621403.1| hypothetical protein LDG_7836 [Legionella drancourtii LLAP12]
 gi|363536659|gb|EHL30093.1| hypothetical protein LDG_7836 [Legionella drancourtii LLAP12]
          Length = 708

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 131/259 (50%), Positives = 178/259 (68%)

Query: 738 EKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKH 797
           E+   L++ + DF  A  +V PS +RE+ ++VP V+W DVGG +++K +L EAVEWP K+
Sbjct: 415 EQLALLEISMSDFLNALCEVEPSVIREIFVDVPNVRWSDVGGHKDIKARLSEAVEWPLKY 474

Query: 798 QEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAV 857
            + F+  G  PP GIL+ G PGC KTL+A+AVA+E+G+NFL+VKG  L SK+VG+SEK V
Sbjct: 475 PQLFREAGIHPPKGILLVGSPGCGKTLLAKAVATESGVNFLSVKGSSLLSKYVGDSEKGV 534

Query: 858 RSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVI 917
           R +F KAR  AP IIFFDEID L   R  ES    V + V+SQ L E DG+ +  NV V+
Sbjct: 535 REVFNKARQAAPCIIFFDEIDALVPKRQHESTETHVMEGVLSQFLAEFDGIEELNNVLVL 594

Query: 918 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 977
            ATNR D +DPA+LRPGRFD L+ +G P+  DR+EIF +H  K P  S+V I +L   ++
Sbjct: 595 GATNRIDMLDPAVLRPGRFDELIEIGIPSAVDRKEIFIVHTSKKPLKSNVKIDDLVLKTD 654

Query: 978 GCTGADISLICREAAISAI 996
             +GA+IS IC  AA+ A+
Sbjct: 655 QMSGAEISSICNRAALFAV 673



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/265 (40%), Positives = 157/265 (59%), Gaps = 17/265 (6%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +ED+GG +    ++ E +E P ++ E F+R+G   P G+L++GPPG  KTL+A+A+A E 
Sbjct: 178  YEDIGGLKPQLRRIREMIELPLRYPEVFERLGVDAPKGVLLYGPPGSGKTLIAKAIAHET 237

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
              +F ++ GPE+  K+ GESE  +R +F +A   APSIIF DEID +A  R +      V
Sbjct: 238  DASFFSISGPEIVHKFYGESEANLRKIFEQAAQKAPSIIFLDEIDAIAPKRDQVVG--EV 295

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              R+++QLL  +DGL+ R  V VI ATN P+ ID AL RPGRFDR + +  P+   R EI
Sbjct: 296  EKRIVAQLLALMDGLNTRQKVIVIGATNLPNSIDSALRRPGRFDREISIAIPDRNGRLEI 355

Query: 954  FRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE---------------E 998
              IH R +P +SDV++  LA ++ G  GAD+ ++C+EAA++ +                E
Sbjct: 356  LEIHSRGMPLASDVDLNHLADITHGFVGADLEVLCKEAAMTCLRTIMPDINFALNTIPYE 415

Query: 999  NLDASRITMQHLKTAIRHVQPSEIH 1023
             L    I+M     A+  V+PS I 
Sbjct: 416  QLALLEISMSDFLNALCEVEPSVIR 440



 Score =  199 bits (505), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 148/234 (63%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +          LG+   KGVLL+GPPG+GKT +A+  AH++  +
Sbjct: 181 IGGLKPQLRRIREMIELPLRYPEVFERLGVDAPKGVLLYGPPGSGKTLIAKAIAHETDAS 240

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F+++GPE+V + YGESE  L ++F+ A+Q AP+++F+DE+DAIAP R     E+ +R+V
Sbjct: 241 FFSISGPEIVHKFYGESEANLRKIFEQAAQKAPSIIFLDEIDAIAPKRDQVVGEVEKRIV 300

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATN P+SI+ ALRRPGR DREI I              A+
Sbjct: 301 AQLLALMDGLNTRQKVIVIGATNLPNSIDSALRRPGRFDREISI--------------AI 346

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEIL     GM  +  D ++ +L+  THGFVGADL  LC EAA+ CLR
Sbjct: 347 PDRNGRLEILEIHSRGMPLA-SDVDLNHLADITHGFVGADLEVLCKEAAMTCLR 399



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 123/211 (58%), Gaps = 21/211 (9%)

Query: 440 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 499
           G+ P KG+LL G PG GKT LA+  A +SGVN  +V G  ++S+  G+SE+ + EVF+ A
Sbjct: 482 GIHPPKGILLVGSPGCGKTLLAKAVATESGVNFLSVKGSSLLSKYVGDSEKGVREVFNKA 541

Query: 500 SQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 557
            Q+AP ++F DE+DA+ P R+    E  + + +++  L   DG+   + VLV+ ATNR D
Sbjct: 542 RQAAPCIIFFDEIDALVPKRQHESTETHVMEGVLSQFLAEFDGIEELNNVLVLGATNRID 601

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLE--ILHALLSGMEHSLLDS 615
            ++PA+ RPGR D  IEI               +PS   R E  I+H     ++ ++   
Sbjct: 602 MLDPAVLRPGRFDELIEI--------------GIPSAVDRKEIFIVHTSKKPLKSNV--- 644

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           +++ L + T    GA+++++CN AAL  +RR
Sbjct: 645 KIDDLVLKTDQMSGAEISSICNRAALFAVRR 675


>gi|302687963|ref|XP_003033661.1| hypothetical protein SCHCODRAFT_75067 [Schizophyllum commune H4-8]
 gi|300107356|gb|EFI98758.1| hypothetical protein SCHCODRAFT_75067 [Schizophyllum commune H4-8]
          Length = 597

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 139/293 (47%), Positives = 206/293 (70%), Gaps = 7/293 (2%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            S  G   ++ L D + A + VRPSAMR + +E P+V++ DVGGQ  V  +L EAVEWP K
Sbjct: 296  SPSGSEPQITLDDLDHALLSVRPSAMRSLFVEAPRVRYADVGGQDAVIERLREAVEWPLK 355

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            H +AF+R+G +PP G+L++GPPGCSKT++ARA A E+G+NF+AVKGPEL +K+VGESE+A
Sbjct: 356  HPDAFRRLGVKPPKGVLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKYVGESERA 415

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            VR +F +ARA AP+IIFFDEID LA  R  ++      + V++ LL E+DG+ + + VT+
Sbjct: 416  VREIFRRARAAAPAIIFFDEIDALATSRDADA---RAHEGVLTSLLNEMDGVQELLGVTI 472

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
            I ATNRP+ +D AL+RPGR DRLLY+GPP++  R+ + RI    +  + D+N+ E+A L+
Sbjct: 473  IGATNRPEVLDSALMRPGRLDRLLYIGPPDQEGRQAVLRIKTAGMQTAPDLNVGEIARLT 532

Query: 977  EGCTGADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSY 1025
            +GC+GA+I+ +C+EAA+  ++ +L+A  +  +    A     R + P  I  +
Sbjct: 533  DGCSGAEIASLCQEAALLTMKRDLNAEYVPHEAFVQAAMKTKRQITPEVIQKF 585



 Score =  186 bits (471), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/240 (43%), Positives = 149/240 (62%), Gaps = 17/240 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GGL K+ A ++D++ I  +      + GL+  +G+LLHGPPGTGKT LAR  A  + 
Sbjct: 66  SSVGGLGKQIAEIRDLLEIPLTRPDLFRNFGLKSPRGLLLHGPPGTGKTHLARAIAAAAR 125

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 529
             +  VNGPE+ S  +GE+E  L  VF+ A+  +P +V +DE+DA+ P R+DGG E+  R
Sbjct: 126 AAVVVVNGPELSSAYHGETEGRLRAVFEDAAARSPCIVVLDEVDALVPRREDGGGEVEAR 185

Query: 530 MVATLLNLMDGVCRTDG--VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +VATLL L+DGV   D   V+V+A TNRP++I+PALRRPGR DREIEI            
Sbjct: 186 VVATLLTLLDGVQADDAGQVIVVATTNRPNAIDPALRRPGRFDREIEI------------ 233

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
              VP    R +IL  LLS   + +   +++ L+   HG+VGADL+++  EA    ++RY
Sbjct: 234 --GVPDVDARADILRILLSKTPNQIRPGDIQALAARAHGYVGADLSSVVREAGTAAIKRY 291



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/261 (39%), Positives = 147/261 (56%), Gaps = 12/261 (4%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            +  VGG  +   ++ + +E P    + F+  G + P G+L+ GPPG  KT +ARA+A+ A
Sbjct: 65   YSSVGGLGKQIAEIRDLLEIPLTRPDLFRNFGLKSPRGLLLHGPPGTGKTHLARAIAAAA 124

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
                + V GPEL S + GE+E  +R++F  A A +P I+  DE+D L   R  E  G  V
Sbjct: 125  RAAVVVVNGPELSSAYHGETEGRLRAVFEDAAARSPCIVVLDEVDALVPRR--EDGGGEV 182

Query: 894  SDRVMSQLLVELDGLH--QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
              RV++ LL  LDG+       V V+A TNRP+ IDPAL RPGRFDR + +G P+   R 
Sbjct: 183  EARVVATLLTLLDGVQADDAGQVIVVATTNRPNAIDPALRRPGRFDREIEIGVPDVDARA 242

Query: 952  EIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS------- 1003
            +I RI L K P      +I+ LA  + G  GAD+S + REA  +AI+  L A+       
Sbjct: 243  DILRILLSKTPNQIRPGDIQALAARAHGYVGADLSSVVREAGTAAIKRYLSAASPSGSEP 302

Query: 1004 RITMQHLKTAIRHVQPSEIHS 1024
            +IT+  L  A+  V+PS + S
Sbjct: 303  QITLDDLDHALLSVRPSAMRS 323



 Score =  140 bits (352), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 129/208 (62%), Gaps = 16/208 (7%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P KGVLL+GPPG  KT LAR CA +SGVN   V GPE++++  GESE+A+ E+F  
Sbjct: 363 LGVKPPKGVLLYGPPGCSKTVLARACACESGVNFVAVKGPELLNKYVGESERAVREIFRR 422

Query: 499 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDS 558
           A  +APA++F DE+DA+A +R D      + ++ +LLN MDGV    GV +I ATNRP+ 
Sbjct: 423 ARAAAPAIIFFDEIDALATSR-DADARAHEGVLTSLLNEMDGVQELLGVTIIGATNRPEV 481

Query: 559 IEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVE 618
           ++ AL RPGRLDR           LL   P   P    R  +L    +GM+ +  D  V 
Sbjct: 482 LDSALMRPGRLDR-----------LLYIGP---PDQEGRQAVLRIKTAGMQ-TAPDLNVG 526

Query: 619 YLSMATHGFVGADLAALCNEAALVCLRR 646
            ++  T G  GA++A+LC EAAL+ ++R
Sbjct: 527 EIARLTDGCSGAEIASLCQEAALLTMKR 554


>gi|391325494|ref|XP_003737268.1| PREDICTED: transitional endoplasmic reticulum ATPase TER94-like
            isoform 1 [Metaseiulus occidentalis]
          Length = 799

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 204/330 (61%), Gaps = 14/330 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F  A  K  PSA+RE ++EVP V WED+GG   VK +L E +++P +H + F
Sbjct: 443  SLAVSMENFRWAMGKSSPSALRETVVEVPNVSWEDIGGLEGVKQELQEMIQYPVEHPDKF 502

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G  PP G+L +GPPGC KTL+A+A+A+E   NF+++KGPEL S W GESE  VR +F
Sbjct: 503  LKFGMSPPKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLSMWFGESESNVRDIF 562

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KARA AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 563  DKARAAAPCVLFFDELDSIAKSRGGSVGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 622

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  R ++FR  LRK P + DV+I  LA ++ G +
Sbjct: 623  NRPDIIDPAILRPGRLDQLIYIPLPDEKSRMQVFRACLRKSPVAKDVDIGFLAKITSGFS 682

Query: 981  GADISLICREAAISAIEENL------DASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            GAD++ IC+ AA  AI E++      + SR    +         P     + E S KF R
Sbjct: 683  GADVTEICQRAAKIAISESIQKEIQREKSRAEGSNAMEMDEDPVPEIRRDHFEESMKFAR 742

Query: 1035 LVHSNAEADESGYQ-----LRPSKSIGSNM 1059
               S  E D   Y+     L+ S+  G+N 
Sbjct: 743  --KSVNENDVRKYEMFAQTLQQSRGFGNNF 770



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 107/231 (46%), Positives = 150/231 (64%), Gaps = 2/231 (0%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++D+GG R+    + E VE P +H   FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 199  EIGYDDIGGCRKQLALIKEMVELPLRHPSLFKTIGVKPPRGILLYGPPGTGKTLIARAVA 258

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DEID +A  R K    
Sbjct: 259  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKREKTHG- 317

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL QR +V V+AATNRP+ ID AL R GRFDR + +  P+ T R
Sbjct: 318  -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRFGRFDREVDISIPDATGR 376

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
             E+ RIH + +  + DV++ ++A  + G  GAD++ +C EAA+  I E +D
Sbjct: 377  LEVLRIHTKNMKLADDVDLEKIAAETHGFVGADLAALCSEAALQQIREKMD 427



 Score =  202 bits (514), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 167/260 (64%), Gaps = 22/260 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A++K+++ +     S   ++G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 205 IGGCRKQLALIKEMVELPLRHPSLFKTIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 264

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDE+DAIAP R+    E+ +R+V
Sbjct: 265 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKREKTHGEVERRIV 324

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ +   V+V+AATNRP+SI+ ALRR GR DRE++I              ++
Sbjct: 325 SQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRFGRFDREVDI--------------SI 370

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
           P    RLE+L      M+ +  D ++E ++  THGFVGADLAALC+EAAL  +R    + 
Sbjct: 371 PDATGRLEVLRIHTKNMKLA-DDVDLEKIAAETHGFVGADLAALCSEAALQQIREKMDVI 429

Query: 651 -----QTSSDVLHSTGTLFE 665
                Q  ++VL+S     E
Sbjct: 430 DLEDDQIDAEVLNSLAVSME 449



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 156/315 (49%), Gaps = 41/315 (13%)

Query: 344 ADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLRE----------GTLP 393
           A L +E +  Q+ E MD      VI+ E        LN+++ S+              L 
Sbjct: 411 AALCSEAALQQIREKMD------VIDLEDDQIDAEVLNSLAVSMENFRWAMGKSSPSALR 464

Query: 394 NAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPP 453
              +E  NV     +DI  L G+ +E   +    +    K      G+ P KGVL +GPP
Sbjct: 465 ETVVEVPNVSW---EDIGGLEGVKQELQEMIQYPVEHPDK--FLKFGMSPPKGVLFYGPP 519

Query: 454 GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
           G GKT LA+  A++   N  ++ GPE++S  +GESE  + ++FD A  +AP V+F DELD
Sbjct: 520 GCGKTLLAKAIANECQANFISIKGPELLSMWFGESESNVRDIFDKARAAAPCVLFFDELD 579

Query: 514 AIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
           +IA +R     D G   + R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRL
Sbjct: 580 SIAKSRGGSVGDAGGA-ADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRL 638

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 629
           D+ I I +              P    R+++  A L     +  D ++ +L+  T GF G
Sbjct: 639 DQLIYIPL--------------PDEKSRMQVFRACLRKSPVA-KDVDIGFLAKITSGFSG 683

Query: 630 ADLAALCNEAALVCL 644
           AD+  +C  AA + +
Sbjct: 684 ADVTEICQRAAKIAI 698


>gi|391325496|ref|XP_003737269.1| PREDICTED: transitional endoplasmic reticulum ATPase TER94-like
            isoform 2 [Metaseiulus occidentalis]
          Length = 798

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 204/330 (61%), Gaps = 14/330 (4%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F  A  K  PSA+RE ++EVP V WED+GG   VK +L E +++P +H + F
Sbjct: 442  SLAVSMENFRWAMGKSSPSALRETVVEVPNVSWEDIGGLEGVKQELQEMIQYPVEHPDKF 501

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G  PP G+L +GPPGC KTL+A+A+A+E   NF+++KGPEL S W GESE  VR +F
Sbjct: 502  LKFGMSPPKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLSMWFGESESNVRDIF 561

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KARA AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 562  DKARAAAPCVLFFDELDSIAKSRGGSVGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 621

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  R ++FR  LRK P + DV+I  LA ++ G +
Sbjct: 622  NRPDIIDPAILRPGRLDQLIYIPLPDEKSRMQVFRACLRKSPVAKDVDIGFLAKITSGFS 681

Query: 981  GADISLICREAAISAIEENL------DASRITMQHLKTAIRHVQPSEIHSYKELSAKFQR 1034
            GAD++ IC+ AA  AI E++      + SR    +         P     + E S KF R
Sbjct: 682  GADVTEICQRAAKIAISESIQKEIQREKSRAEGSNAMEMDEDPVPEIRRDHFEESMKFAR 741

Query: 1035 LVHSNAEADESGYQ-----LRPSKSIGSNM 1059
               S  E D   Y+     L+ S+  G+N 
Sbjct: 742  --KSVNENDVRKYEMFAQTLQQSRGFGNNF 769



 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 107/231 (46%), Positives = 150/231 (64%), Gaps = 2/231 (0%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++D+GG R+    + E VE P +H   FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 198  EIGYDDIGGCRKQLALIKEMVELPLRHPSLFKTIGVKPPRGILLYGPPGTGKTLIARAVA 257

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DEID +A  R K    
Sbjct: 258  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKREKTHG- 316

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL QR +V V+AATNRP+ ID AL R GRFDR + +  P+ T R
Sbjct: 317  -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRFGRFDREVDISIPDATGR 375

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
             E+ RIH + +  + DV++ ++A  + G  GAD++ +C EAA+  I E +D
Sbjct: 376  LEVLRIHTKNMKLADDVDLEKIAAETHGFVGADLAALCSEAALQQIREKMD 426



 Score =  202 bits (514), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 167/260 (64%), Gaps = 22/260 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A++K+++ +     S   ++G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 204 IGGCRKQLALIKEMVELPLRHPSLFKTIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 263

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDE+DAIAP R+    E+ +R+V
Sbjct: 264 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKREKTHGEVERRIV 323

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ +   V+V+AATNRP+SI+ ALRR GR DRE++I              ++
Sbjct: 324 SQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRFGRFDREVDI--------------SI 369

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
           P    RLE+L      M+ +  D ++E ++  THGFVGADLAALC+EAAL  +R    + 
Sbjct: 370 PDATGRLEVLRIHTKNMKLA-DDVDLEKIAAETHGFVGADLAALCSEAALQQIREKMDVI 428

Query: 651 -----QTSSDVLHSTGTLFE 665
                Q  ++VL+S     E
Sbjct: 429 DLEDDQIDAEVLNSLAVSME 448



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 156/315 (49%), Gaps = 41/315 (13%)

Query: 344 ADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLRE----------GTLP 393
           A L +E +  Q+ E MD      VI+ E        LN+++ S+              L 
Sbjct: 410 AALCSEAALQQIREKMD------VIDLEDDQIDAEVLNSLAVSMENFRWAMGKSSPSALR 463

Query: 394 NAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPP 453
              +E  NV     +DI  L G+ +E   +    +    K      G+ P KGVL +GPP
Sbjct: 464 ETVVEVPNVSW---EDIGGLEGVKQELQEMIQYPVEHPDK--FLKFGMSPPKGVLFYGPP 518

Query: 454 GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 513
           G GKT LA+  A++   N  ++ GPE++S  +GESE  + ++FD A  +AP V+F DELD
Sbjct: 519 GCGKTLLAKAIANECQANFISIKGPELLSMWFGESESNVRDIFDKARAAAPCVLFFDELD 578

Query: 514 AIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 569
           +IA +R     D G   + R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRL
Sbjct: 579 SIAKSRGGSVGDAGGA-ADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRL 637

Query: 570 DREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 629
           D+ I I +              P    R+++  A L     +  D ++ +L+  T GF G
Sbjct: 638 DQLIYIPL--------------PDEKSRMQVFRACLRKSPVA-KDVDIGFLAKITSGFSG 682

Query: 630 ADLAALCNEAALVCL 644
           AD+  +C  AA + +
Sbjct: 683 ADVTEICQRAAKIAI 697


>gi|255935935|ref|XP_002558994.1| Pc13g05600 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583614|emb|CAP91629.1| Pc13g05600 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 751

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 132/265 (49%), Positives = 184/265 (69%), Gaps = 4/265 (1%)

Query: 733 GMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVE 792
           G    E   +L+++  D   +  ++RP+AMREV LE PKV+W D+GGQ ++K +L +AVE
Sbjct: 448 GFSEDESAISLEIQETDILLSLQEIRPTAMREVFLETPKVRWSDIGGQHDIKKRLQQAVE 507

Query: 793 WPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGE 852
            P K+ +  +R+      G+L++GPPGCSKTL  +A+A+EAGLNFLAVKG E+ S +VGE
Sbjct: 508 RPLKYPQRMRRLNVNSKKGVLLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGE 567

Query: 853 SEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV 912
           SE+A+R +F KARA  PSIIFFDEID +AA R   S GV+    V++ LL E+DG+ +  
Sbjct: 568 SERALREIFRKARAARPSIIFFDEIDAIAARRSSSSGGVN----VLTTLLNEMDGIEELR 623

Query: 913 NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIREL 972
           NV VIAATN+PD +DPAL+RPGR D +LY+GPP+   R EI RI   K   + +V++  L
Sbjct: 624 NVLVIAATNKPDVLDPALMRPGRLDNILYIGPPDFEARREILRIWTNKSVVNPEVDLDNL 683

Query: 973 ACLSEGCTGADISLICREAAISAIE 997
           A L+EG +GA+I  IC  A  +A++
Sbjct: 684 ASLTEGYSGAEIVSICETAGDAALD 708



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 123/223 (55%), Gaps = 21/223 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L +   KGVLL+GPPG  KT   +  A ++G+N   V G E++S   GESE+AL E+
Sbjct: 516 MRRLNVNSKKGVLLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGESERALREI 575

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A  + P+++F DE+DAIA  R      ++  ++ TLLN MDG+     VLVIAATN+
Sbjct: 576 FRKARAARPSIIFFDEIDAIAARRSSSSGGVN--VLTTLLNEMDGIEELRNVLVIAATNK 633

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD ++PAL RPGRLD           ++L   P   P    R EIL    +    S+++ 
Sbjct: 634 PDVLDPALMRPGRLD-----------NILYIGP---PDFEARREILRIWTN---KSVVNP 676

Query: 616 EVEYLSMA--THGFVGADLAALCNEAALVCLRRYSKIQTSSDV 656
           EV+  ++A  T G+ GA++ ++C  A    L    + Q   DV
Sbjct: 677 EVDLDNLASLTEGYSGAEIVSICETAGDAALDEEEETQQEQDV 719



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 118/249 (47%), Gaps = 42/249 (16%)

Query: 406 VEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTK-----------GVLLHGPPG 454
           +E   + LGGLS++            +  +LS   + P K           G+LL+GP G
Sbjct: 201 IEVQPTGLGGLSRQI---------DDINESLSDFNVDPRKPAMPSFYENSRGILLYGPKG 251

Query: 455 TGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDA 514
           TGKTSL            F V G   + ++  E E  L  +F  A++S P+V+ ID+LD 
Sbjct: 252 TGKTSLLEQIEKAGWKQTFKV-GMSTLGRSTHEGEVKLRNIFQEAARSNPSVIIIDQLDF 310

Query: 515 IAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIE 574
           IAP R       S  + + L   +D + R   VLV+AAT  P+ ++ ALR P RL  EIE
Sbjct: 311 IAPKRTSIE---SHSLASVLCENLDAI-RNTSVLVVAATRHPNQVDDALRTPHRLGTEIE 366

Query: 575 IDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAA 634
           I               VP+   R EIL A+   +   L D  V+ L+  THG+VGADL A
Sbjct: 367 IQ--------------VPTAQDRAEILRAIRGPVSAGLTDELVDLLAEKTHGYVGADLFA 412

Query: 635 LCNEAALVC 643
           L     LVC
Sbjct: 413 LLQ---LVC 418



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 24/223 (10%)

Query: 811  GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
            GIL++GP G  KT +   +  +AG       G     +   E E  +R++F +A  + PS
Sbjct: 243  GILLYGPKGTGKTSLLEQI-EKAGWKQTFKVGMSTLGRSTHEGEVKLRNIFQEAARSNPS 301

Query: 871  IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVE-LDGLHQRVNVTVIAATNRPDKIDPA 929
            +I  D++D +A  R       S+    ++ +L E LD + +  +V V+AAT  P+++D A
Sbjct: 302  VIIIDQLDFIAPKR------TSIESHSLASVLCENLDAI-RNTSVLVVAATRHPNQVDDA 354

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGAD----I 984
            L  P R    + +  P   DR EI R     +    +D  +  LA  + G  GAD    +
Sbjct: 355  LRTPHRLGTEIEIQVPTAQDRAEILRAIRGPVSAGLTDELVDLLAEKTHGYVGADLFALL 414

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKE 1027
             L+CR+A            R  ++   TAI   QP     ++E
Sbjct: 415  QLVCRKA----------RQRQLVEQNSTAISASQPDPFSWHQE 447


>gi|448726352|ref|ZP_21708759.1| AAA family ATPase, partial [Halococcus morrhuae DSM 1307]
 gi|445795172|gb|EMA45703.1| AAA family ATPase, partial [Halococcus morrhuae DSM 1307]
          Length = 276

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 131/259 (50%), Positives = 182/259 (70%), Gaps = 5/259 (1%)

Query: 779  GQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFL 838
            G  + K +L EAVEWP    E F R+G  PP G+L++GPPG  KTLMA+AVA+E   NF+
Sbjct: 1    GLEDAKGELKEAVEWPLSSPERFSRLGIEPPAGVLLYGPPGTGKTLMAKAVANETNANFI 60

Query: 839  AVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVM 898
            +V+GP+L SKWVGESEKA+R  F KAR  +P++IFFDE+D LA  RG +  G +VS+RV+
Sbjct: 61   SVRGPQLLSKWVGESEKAIRQTFKKARQVSPTVIFFDELDSLAPSRGGDV-GSNVSERVV 119

Query: 899  SQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 958
            +QLL ELDGL    NV VIAATNRPD IDPAL+R GRFDRL+ VG P+   RE I  IH 
Sbjct: 120  NQLLTELDGLEDMKNVMVIAATNRPDMIDPALIRSGRFDRLVMVGQPSIEGRERILSIHT 179

Query: 959  RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
               P ++DV++RE+A +++G  G+D+  I REAAI A+ ++ DA+ + M+H ++A+  V+
Sbjct: 180  DDTPLAADVSLREIAEITDGYVGSDLESIAREAAIQALRDDPDANVVEMRHFRSALETVR 239

Query: 1019 PS----EIHSYKELSAKFQ 1033
            P+     +  Y  ++ +F+
Sbjct: 240  PTITEDILDYYDRMAEEFK 258



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 20/213 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S LG+ P  GVLL+GPPGTGKT +A+  A+++  N  +V GP+++S+  GESE+A+ + 
Sbjct: 23  FSRLGIEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 82

Query: 496 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           F  A Q +P V+F DELD++AP+R  D G  +S+R+V  LL  +DG+     V+VIAATN
Sbjct: 83  FKKARQVSPTVIFFDELDSLAPSRGGDVGSNVSERVVNQLLTELDGLEDMKNVMVIAATN 142

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PAL R GR DR + +                PS   R  IL       + + L 
Sbjct: 143 RPDMIDPALIRSGRFDRLVMV--------------GQPSIEGRERILSI---HTDDTPLA 185

Query: 615 SEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           ++V    +A  T G+VG+DL ++  EAA+  LR
Sbjct: 186 ADVSLREIAEITDGYVGSDLESIAREAAIQALR 218


>gi|429965912|gb|ELA47909.1| AAA family ATPase, CDC48 subfamily [Vavraia culicis 'floridensis']
          Length = 795

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 136/346 (39%), Positives = 211/346 (60%), Gaps = 26/346 (7%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +LK+   DF  A     PS++RE ++E P ++WED+GG + VK +L E V +P K  E +
Sbjct: 450  SLKVTTEDFTYAVDNTDPSSLRETVVETPNIQWEDIGGLQAVKDELRETVSYPIKFSEKY 509

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             ++G  P  GIL +GPPGC KTL+A+AVASE   NF++VKGPEL + WVGESE  VR +F
Sbjct: 510  VQLGMAPSRGILFYGPPGCGKTLLAKAVASECSANFISVKGPELLNMWVGESEANVRDIF 569

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
             KAR++AP +IFFDE+D +A  R   S    V+DRV++Q+L E+DG+  + NV VI ATN
Sbjct: 570  DKARSSAPCVIFFDELDSIAKSRSSGSSDAGVTDRVLNQMLTEMDGISAKKNVFVIGATN 629

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD++D ALLRPGR D+L+++  P++  R  IF+   RK P + DVN++ +A +++GC+G
Sbjct: 630  RPDQLDTALLRPGRLDQLIFIPLPDQDSRNSIFKATCRKTPLNRDVNLKAVAEMTKGCSG 689

Query: 982  ADISLICREAAISAIEENLDASRITMQHLK-------------------TAIRHVQPSEI 1022
            ADI+ I + A   A++E++      M++++                    ++RH Q S  
Sbjct: 690  ADIAEIVQRARKFALKESIQRDMDKMKNIRKKNGDVDEEDIELESEPLFVSLRHFQESLK 749

Query: 1023 HSYKELSAK-------FQRLVHSNAEADESGYQLRPSKSIGSNMWT 1061
            ++ + ++ K       F R ++ N     +  Q RP  +   +++ 
Sbjct: 750  NTRRSVTQKDMERYESFARSMNINLNLSNNERQERPENNNVEDLYN 795



 Score =  212 bits (540), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 112/267 (41%), Positives = 159/267 (59%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            + ++DVGG R    Q+ E +E P +H   +  +G  PP GIL+FGPPG  KTL+ARA+A+
Sbjct: 207  IGYDDVGGCRRQMAQVRELIELPLRHPSLYTSLGINPPRGILLFGPPGTGKTLIARAIAN 266

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G     V GPE+ SK  GESE  +R++F +A  NAPSIIF DEID +A  R K S G 
Sbjct: 267  ETGAFLYVVNGPEIMSKMSGESESNLRNVFKEAEKNAPSIIFIDEIDSIAPKREK-SHG- 324

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DG+ +  NV V+ ATNRP+ IDPAL R GRF R + +G P++  R 
Sbjct: 325  EVERRIVSQLLTLMDGIKKATNVIVLGATNRPNSIDPALRRYGRFGREIEIGIPDKIGRL 384

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI RIH R +  + DV++ ++A  + G  G+DI+ +C EAA+  I               
Sbjct: 385  EILRIHTRNMSLAEDVDLEKVANETHGFVGSDIASLCSEAAMQQIRRKMPKIDIESDKVD 444

Query: 998  -ENLDASRITMQHLKTAIRHVQPSEIH 1023
             E L + ++T +    A+ +  PS + 
Sbjct: 445  AEILSSLKVTTEDFTYAVDNTDPSSLR 471



 Score =  202 bits (514), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 108/245 (44%), Positives = 158/245 (64%), Gaps = 17/245 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  ++ A ++++I +     S  +SLG+ P +G+LL GPPGTGKT +AR  A+++G  
Sbjct: 212 VGGCRRQMAQVRELIELPLRHPSLYTSLGINPPRGILLFGPPGTGKTLIARAIANETGAF 271

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
           L+ VNGPE++S+  GESE  L  VF  A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 272 LYVVNGPEIMSKMSGESESNLRNVFKEAEKNAPSIIFIDEIDSIAPKREKSHGEVERRIV 331

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ +   V+V+ ATNRP+SI+PALRR GR  REIEI               +
Sbjct: 332 SQLLTLMDGIKKATNVIVLGATNRPNSIDPALRRYGRFGREIEI--------------GI 377

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR-YSKI 650
           P    RLEIL      M  +  D ++E ++  THGFVG+D+A+LC+EAA+  +RR   KI
Sbjct: 378 PDKIGRLEILRIHTRNMSLA-EDVDLEKVANETHGFVGSDIASLCSEAAMQQIRRKMPKI 436

Query: 651 QTSSD 655
              SD
Sbjct: 437 DIESD 441



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 141/280 (50%), Gaps = 35/280 (12%)

Query: 372 TKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSS 431
           T+ + Y   N    SLRE  +    I+++++           GGL      L++ + S  
Sbjct: 455 TEDFTYAVDNTDPSSLRETVVETPNIQWEDI-----------GGLQAVKDELRETV-SYP 502

Query: 432 VK--STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESE 489
           +K       LG+ P++G+L +GPPG GKT LA+  A +   N  +V GPE+++   GESE
Sbjct: 503 IKFSEKYVQLGMAPSRGILFYGPPGCGKTLLAKAVASECSANFISVKGPELLNMWVGESE 562

Query: 490 QALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGV 547
             + ++FD A  SAP V+F DELD+IA +R  G  +  ++ R++  +L  MDG+     V
Sbjct: 563 ANVRDIFDKARSSAPCVIFFDELDSIAKSRSSGSSDAGVTDRVLNQMLTEMDGISAKKNV 622

Query: 548 LVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSG 607
            VI ATNRPD ++ AL RPGRLD+ I I               +P    R  I  A    
Sbjct: 623 FVIGATNRPDQLDTALLRPGRLDQLIFI--------------PLPDQDSRNSIFKATC-- 666

Query: 608 MEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
              + L+ +V   ++A  T G  GAD+A +   A    L+
Sbjct: 667 -RKTPLNRDVNLKAVAEMTKGCSGADIAEIVQRARKFALK 705


>gi|328783535|ref|XP_392892.3| PREDICTED: transitional endoplasmic reticulum ATPase TER94 isoform 1
            [Apis mellifera]
          Length = 811

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 126/261 (48%), Positives = 184/261 (70%), Gaps = 1/261 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F+ A  K  PSA+RE I+EVP V W+D+GG + VK +L E V++P +H + F
Sbjct: 441  SLAVTMDNFKYAMTKSSPSALRETIVEVPTVTWDDIGGLQNVKMELQELVQYPVEHPDKF 500

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 501  LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVF 560

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KARA AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 561  DKARAAAPCVLFFDELDSIAKSRGGTLGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 620

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE IFR +LRK P + DV++  +A ++ G +
Sbjct: 621  NRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIFRANLRKSPVAKDVDLSYIAKVTHGFS 680

Query: 981  GADISLICREAAISAIEENLD 1001
            GADI+ IC+ A   AI ++++
Sbjct: 681  GADITEICQRACKLAIRQSIE 701



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 155/243 (63%), Gaps = 2/243 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P +H   FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 198  VGYDDIGGVRKQLAQIKEMVELPLRHPSLFKVIGVKPPRGILLYGPPGTGKTLIARAVAN 257

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K     
Sbjct: 258  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHG-- 315

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DG+ Q  +V V+AATNRP+ IDPAL R GRFD+ + +G P+ T R 
Sbjct: 316  EVERRIVSQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDIGIPDATGRL 375

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EI RIH + +  + DV + E+A  + G  GAD++ +C EAA+  I E +D   +  +H+ 
Sbjct: 376  EILRIHTKNMKLADDVELEEIAAETHGHVGADLASLCSEAALQQIREKMDLIDLEEEHID 435

Query: 1012 TAI 1014
              +
Sbjct: 436  AEV 438



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 157/234 (67%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +K+++ +     S    +G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 203 IGGVRKQLAQIKEMVELPLRHPSLFKVIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 262

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDELDAIAP R+    E+ +R+V
Sbjct: 263 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHGEVERRIV 322

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ ++  V+V+AATNRP+SI+PALRR GR D+EI+I               +
Sbjct: 323 SQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDI--------------GI 368

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEIL      M+ +  D E+E ++  THG VGADLA+LC+EAAL  +R
Sbjct: 369 PDATGRLEILRIHTKNMKLA-DDVELEEIAAETHGHVGADLASLCSEAALQQIR 421



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 20/212 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G++P++GVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + +VFD 
Sbjct: 503 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDK 562

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A  +AP V+F DELD+IA +R     D G   + R++  +L  MDG+     V +I ATN
Sbjct: 563 ARAAAPCVLFFDELDSIAKSRGGTLGDAGGA-ADRVINQILTEMDGMGAKKNVFIIGATN 621

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PA+ RPGRLD+ I I +              P    R  I  A L     +  D
Sbjct: 622 RPDIIDPAILRPGRLDQLIYIPL--------------PDEKSREAIFRANLRKSPVA-KD 666

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            ++ Y++  THGF GAD+  +C  A  + +R+
Sbjct: 667 VDLSYIAKVTHGFSGADITEICQRACKLAIRQ 698


>gi|386874673|ref|ZP_10116906.1| AAA family ATPase, CDC48 family protein [Candidatus Nitrosopumilus
            salaria BD31]
 gi|386807542|gb|EIJ66928.1| AAA family ATPase, CDC48 family protein [Candidatus Nitrosopumilus
            salaria BD31]
          Length = 728

 Score =  273 bits (697), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 135/289 (46%), Positives = 196/289 (67%), Gaps = 20/289 (6%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+KA ++V PS MREV +E P VKWEDVGG  +VK +L EAVEWP K+   + ++G + 
Sbjct: 424  DFQKALIEVTPSGMREVFIENPDVKWEDVGGLEDVKRELQEAVEWPMKYPGLYDKLGHKM 483

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+ GP G  KTL+A+AVA+++  NF++V+GPEL SKWVGESE+ +R +F +AR +A
Sbjct: 484  PRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFKRARQSA 543

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P ++FFDEID +A IRG   +  +V++RV+SQLL ELDG+     V V+AATNR D IDP
Sbjct: 544  PCVVFFDEIDSIAPIRGAGGE-TAVTERVVSQLLTELDGMENMHGVIVLAATNRADMIDP 602

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD------VNIRELACLSEGCTGA 982
            ALLRPGRFD+++ +  P++  R+ I +I+  KIP + D      V+I ++A L++G +GA
Sbjct: 603  ALLRPGRFDKIIQIPLPDKESRKSILKINAAKIPTNIDENDPQRVDIDKIAELTDGLSGA 662

Query: 983  DISLICREAAISAIEENLDA-------------SRITMQHLKTAIRHVQ 1018
            D + I   A    I E LD+             +++TM+H + A++ V+
Sbjct: 663  DTASIANTAVSIVIHEFLDSHPDVKDIEKNSMDAKVTMKHFEEAVKKVR 711



 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 116/272 (42%), Positives = 170/272 (62%), Gaps = 17/272 (6%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E +  VP+V +ED+GG      ++ E +E P +H E F+++G   P G+L++GPPG  KT
Sbjct: 166  ETLRGVPQVTYEDIGGISNEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKT 225

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+AVA+E+  +F+++ GPE+ SK+ GESE  +R +F +AR  APSIIF DEID +A  
Sbjct: 226  LLAKAVANESQAHFISISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPK 285

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            R +E  G  V  RV+SQ+L  +DGL  R  V VIAATNRP+ IDPAL RPGRFDR + + 
Sbjct: 286  R-EEVTG-EVERRVVSQMLSLMDGLEARGKVIVIAATNRPNAIDPALRRPGRFDREIEIK 343

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------ 997
             P++  R++I  IH R +P S DV+I +++ +S G  GAD+  +C+EAA+  +       
Sbjct: 344  VPDKKGRKDILSIHSRNMPLSDDVDIEKISAVSHGYVGADLEYLCKEAAMKCLRRLLPVL 403

Query: 998  ---------ENLDASRITMQHLKTAIRHVQPS 1020
                     E LD   +  +  + A+  V PS
Sbjct: 404  NLEEEKLPPETLDKLIVNHEDFQKALIEVTPS 435



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/235 (44%), Positives = 152/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+S E   ++++I +          LG+   KGVLL+GPPGTGKT LA+  A++S  +
Sbjct: 179 IGGISNEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKTLLAKAVANESQAH 238

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE  L E+F  A + AP+++F+DE+D+IAP R++   E+ +R+V
Sbjct: 239 FISISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPKREEVTGEVERRVV 298

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + +L+LMDG+     V+VIAATNRP++I+PALRRPGR DREIEI               V
Sbjct: 299 SQMLSLMDGLEARGKVIVIAATNRPNAIDPALRRPGRFDREIEI--------------KV 344

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R +IL      M  S  D ++E +S  +HG+VGADL  LC EAA+ CLRR
Sbjct: 345 PDKKGRKDILSIHSRNMPLS-DDVDIEKISAVSHGYVGADLEYLCKEAAMKCLRR 398



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 157/290 (54%), Gaps = 32/290 (11%)

Query: 364 NAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA--TVEQDISKLGGLSKEYA 421
           +  ++NHE   +    +      +RE  + N  +++++V     V++++ +      +Y 
Sbjct: 416 DKLIVNHED--FQKALIEVTPSGMREVFIENPDVKWEDVGGLEDVKRELQEAVEWPMKYP 473

Query: 422 ILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
            L D             LG +  +G+LLHGP GTGKT LA+  A  S  N  +V GPE++
Sbjct: 474 GLYD------------KLGHKMPRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELL 521

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE-LSQRMVATLLNLMDG 540
           S+  GESE+ + E+F  A QSAP VVF DE+D+IAP R  GGE  +++R+V+ LL  +DG
Sbjct: 522 SKWVGESERGIREIFKRARQSAPCVVFFDEIDSIAPIRGAGGETAVTERVVSQLLTELDG 581

Query: 541 VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQR 597
           +    GV+V+AATNR D I+PAL RPGR D+ I+I   D     S+LK + A +P+    
Sbjct: 582 MENMHGVIVLAATNRADMIDPALLRPGRFDKIIQIPLPDKESRKSILKINAAKIPTNID- 640

Query: 598 LEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
                      E+     +++ ++  T G  GAD A++ N A  + +  +
Sbjct: 641 -----------ENDPQRVDIDKIAELTDGLSGADTASIANTAVSIVIHEF 679


>gi|356483069|dbj|BAL14440.1| cell division cycle protein 48 homolog [Allium cepa]
          Length = 808

 Score =  273 bits (697), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 200/323 (61%), Gaps = 16/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 457  FKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 516

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF+++KGPEL + W GESE  VR +F KAR +AP
Sbjct: 517  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAP 576

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D     DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 577  CVLFFDELDSIATQRGSSVGDAGGAGDRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 636

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P + +V++  LA  ++G +GADI+ IC
Sbjct: 637  ALLRPGRLDQLIYIPLPDEASRLQIFKACLRKSPIAKEVDLNALAKYTQGFSGADITEIC 696

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSA-------KFQRLVHSNAE 1041
            + A   AI EN++   I M+  + A       ++    E+ A       K+ R   S ++
Sbjct: 697  QRACKYAIRENIEKD-IEMEKRREANPDSMEEDVEEVAEIKAVHFEESMKYAR--RSVSD 753

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+  GS  
Sbjct: 754  ADIRKYQAFAQTLQQSRGFGSEF 776



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 164/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 205  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 264

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G
Sbjct: 265  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG 323

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 324  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 382

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +    DV++  +A  + G  GAD++ +C EA +  I E +D         
Sbjct: 383  LEVLRIHTKNMKLPEDVDLERIAKDTHGYVGADLAALCTEAVLQCIREKMDVIDLEDDSI 442

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H KTA+    PS + 
Sbjct: 443  DAEILNSMAVTDEHFKTALGTSNPSALR 470



 Score =  201 bits (510), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/234 (43%), Positives = 153/234 (65%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 211 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 270

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 271 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 330

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 331 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 376

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+    D ++E ++  THG+VGADLAALC EA L C+R
Sbjct: 377 PDEIGRLEVLRIHTKNMKLP-EDVDLERIAKDTHGYVGADLAALCTEAVLQCIR 429



 Score =  150 bits (378), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 119/216 (55%), Gaps = 24/216 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  ++ GPE+++  +GESE  + E+
Sbjct: 508 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 567

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A  SAP V+F DELD+IA  R     D G     R++  LL  MDG+     V +I 
Sbjct: 568 FDKARGSAPCVLFFDELDSIATQRGSSVGDAG-GAGDRVLNQLLTEMDGMSAKKTVFIIG 626

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P  A RL+I  A L     S
Sbjct: 627 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDEASRLQIFKACL---RKS 669

Query: 612 LLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            +  EV+  ++A  T GF GAD+  +C  A    +R
Sbjct: 670 PIAKEVDLNALAKYTQGFSGADITEICQRACKYAIR 705


>gi|350426753|ref|XP_003494532.1| PREDICTED: transitional endoplasmic reticulum ATPase TER94-like
            [Bombus impatiens]
          Length = 811

 Score =  272 bits (696), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 126/261 (48%), Positives = 184/261 (70%), Gaps = 1/261 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F+ A  K  PSA+RE I+EVP V W+D+GG + VK +L E V++P +H + F
Sbjct: 441  SLAVTMDNFKYAMTKSSPSALRETIVEVPTVTWDDIGGLQNVKMELQELVQYPVEHPDKF 500

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 501  LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVF 560

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KARA AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 561  DKARAAAPCVLFFDELDSIAKSRGGTLGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 620

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE IFR +LRK P + DV++  +A ++ G +
Sbjct: 621  NRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIFRANLRKSPVAKDVDLSYIAKVTHGFS 680

Query: 981  GADISLICREAAISAIEENLD 1001
            GADI+ IC+ A   AI ++++
Sbjct: 681  GADITEICQRACKLAIRQSIE 701



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 155/243 (63%), Gaps = 2/243 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P +H   FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 198  VGYDDIGGVRKQLAQIKEMVELPLRHPSLFKVIGVKPPRGILLYGPPGTGKTLIARAVAN 257

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K     
Sbjct: 258  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHG-- 315

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DG+ Q  +V V+AATNRP+ IDPAL R GRFD+ + +G P+ T R 
Sbjct: 316  EVERRIVSQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDIGIPDATGRL 375

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EI RIH + +  + DV + E+A  + G  GAD++ +C EAA+  I E +D   +  +H+ 
Sbjct: 376  EILRIHTKNMKLADDVELEEIAAETHGHVGADLASLCSEAALQQIREKMDLIDLEEEHID 435

Query: 1012 TAI 1014
              +
Sbjct: 436  AEV 438



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 157/234 (67%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +K+++ +     S    +G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 203 IGGVRKQLAQIKEMVELPLRHPSLFKVIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 262

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDELDAIAP R+    E+ +R+V
Sbjct: 263 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHGEVERRIV 322

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ ++  V+V+AATNRP+SI+PALRR GR D+EI+I               +
Sbjct: 323 SQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDI--------------GI 368

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEIL      M+ +  D E+E ++  THG VGADLA+LC+EAAL  +R
Sbjct: 369 PDATGRLEILRIHTKNMKLA-DDVELEEIAAETHGHVGADLASLCSEAALQQIR 421



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 20/212 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G++P++GVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + +VFD 
Sbjct: 503 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDK 562

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A  +AP V+F DELD+IA +R     D G   + R++  +L  MDG+     V +I ATN
Sbjct: 563 ARAAAPCVLFFDELDSIAKSRGGTLGDAGGA-ADRVINQILTEMDGMGAKKNVFIIGATN 621

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PA+ RPGRLD+ I I +              P    R  I  A L     +  D
Sbjct: 622 RPDIIDPAILRPGRLDQLIYIPL--------------PDEKSREAIFRANLRKSPVA-KD 666

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            ++ Y++  THGF GAD+  +C  A  + +R+
Sbjct: 667 VDLSYIAKVTHGFSGADITEICQRACKLAIRQ 698


>gi|340722106|ref|XP_003399450.1| PREDICTED: transitional endoplasmic reticulum ATPase TER94-like
            [Bombus terrestris]
          Length = 811

 Score =  272 bits (696), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 126/261 (48%), Positives = 184/261 (70%), Gaps = 1/261 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F+ A  K  PSA+RE I+EVP V W+D+GG + VK +L E V++P +H + F
Sbjct: 441  SLAVTMDNFKYAMTKSSPSALRETIVEVPTVTWDDIGGLQNVKMELQELVQYPVEHPDKF 500

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 501  LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVF 560

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KARA AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 561  DKARAAAPCVLFFDELDSIAKSRGGTLGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 620

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE IFR +LRK P + DV++  +A ++ G +
Sbjct: 621  NRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIFRANLRKSPVAKDVDLSYIAKVTHGFS 680

Query: 981  GADISLICREAAISAIEENLD 1001
            GADI+ IC+ A   AI ++++
Sbjct: 681  GADITEICQRACKLAIRQSIE 701



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 155/243 (63%), Gaps = 2/243 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P +H   FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 198  VGYDDIGGVRKQLAQIKEMVELPLRHPSLFKVIGVKPPRGILLYGPPGTGKTLIARAVAN 257

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K     
Sbjct: 258  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHG-- 315

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DG+ Q  +V V+AATNRP+ IDPAL R GRFD+ + +G P+ T R 
Sbjct: 316  EVERRIVSQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDIGIPDATGRL 375

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EI RIH + +  + DV + E+A  + G  GAD++ +C EAA+  I E +D   +  +H+ 
Sbjct: 376  EILRIHTKNMKLADDVELEEIAAETHGHVGADLASLCSEAALQQIREKMDLIDLEEEHID 435

Query: 1012 TAI 1014
              +
Sbjct: 436  AEV 438



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 157/234 (67%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +K+++ +     S    +G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 203 IGGVRKQLAQIKEMVELPLRHPSLFKVIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 262

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDELDAIAP R+    E+ +R+V
Sbjct: 263 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHGEVERRIV 322

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ ++  V+V+AATNRP+SI+PALRR GR D+EI+I               +
Sbjct: 323 SQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDI--------------GI 368

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEIL      M+ +  D E+E ++  THG VGADLA+LC+EAAL  +R
Sbjct: 369 PDATGRLEILRIHTKNMKLA-DDVELEEIAAETHGHVGADLASLCSEAALQQIR 421



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 20/212 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G++P++GVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + +VFD 
Sbjct: 503 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDK 562

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A  +AP V+F DELD+IA +R     D G   + R++  +L  MDG+     V +I ATN
Sbjct: 563 ARAAAPCVLFFDELDSIAKSRGGTLGDAGGA-ADRVINQILTEMDGMGAKKNVFIIGATN 621

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PA+ RPGRLD+ I I +              P    R  I  A L     +  D
Sbjct: 622 RPDIIDPAILRPGRLDQLIYIPL--------------PDEKSREAIFRANLRKSPVA-KD 666

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            ++ Y++  THGF GAD+  +C  A  + +R+
Sbjct: 667 VDLSYIAKVTHGFSGADITEICQRACKLAIRQ 698


>gi|2492504|sp|Q96372.1|CDC48_CAPAN RecName: Full=Cell division cycle protein 48 homolog
 gi|1669660|emb|CAA70565.1| protein of AAA family [Capsicum annuum]
          Length = 805

 Score =  272 bits (696), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 126/253 (49%), Positives = 177/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +  E F++ G  P 
Sbjct: 456  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPS 515

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 516  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575

Query: 870  SIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG  S D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 576  CVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 635

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S D+++R LA  ++G +GAD++ IC
Sbjct: 636  ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEIC 695

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 696  QRACKYAIRENIE 708



 Score =  223 bits (568), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 162/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 204  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 264  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 323  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+  IH + +  + +V++  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 382  LEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTI 441

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 442  DAEVLNSMAVTNEHFQTALGTSNPSALR 469



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 103/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 375

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  + ++E +S  THG+VGADLAALC EAAL C+R
Sbjct: 376 PDEVGRLEVLGIHTKNMKLA-EEVDLERISKDTHGYVGADLAALCTEAALQCIR 428



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/216 (40%), Positives = 119/216 (55%), Gaps = 24/216 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSSGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 625

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P    R +I  A L     S
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDEDSRHQIFKACL---RKS 668

Query: 612 LLDSEVEYLSMATH--GFVGADLAALCNEAALVCLR 645
            L  +++  ++A H  GF GAD+  +C  A    +R
Sbjct: 669 PLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIR 704


>gi|167840344|ref|ZP_02467028.1| cell division control protein 48 ATPase of AAA family CDC48 subfamily
            [Burkholderia thailandensis MSMB43]
          Length = 622

 Score =  272 bits (696), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 136/276 (49%), Positives = 186/276 (67%), Gaps = 8/276 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L + + DF  A  ++ PSA+REV +EVP V+WEDVGG    K QL+EA+EWP K+ E   
Sbjct: 333  LVVNMDDFLSALAEIDPSAIREVFVEVPNVRWEDVGGLGNAKAQLIEALEWPLKYPELLT 392

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R G +P  GIL+ GPPGC KT +A+A A+E G+NF+ VKGPEL SK++GESEK VR +F 
Sbjct: 393  RAGAKPSKGILLVGPPGCGKTWLAKAAANECGVNFIPVKGPELMSKYIGESEKGVRDVFR 452

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP ++FFDEID LA  R + + G  V +R++SQ L E DG+ +   V V+AATNR
Sbjct: 453  KARHAAPCLLFFDEIDALAPRRSEGATGAHVPERLLSQFLAEFDGIEELKGVMVLAATNR 512

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             D +DPA+LRPGRFD ++ +  P+   R EIF +HLR+ P ++DV    +A  S G + A
Sbjct: 513  IDMLDPAVLRPGRFDEIIEIALPDPAARREIFDVHLRRKPLAADVASDRMAEESSGFSAA 572

Query: 983  DISLICREAAISAI-----EENLDASRITMQHLKTA 1013
            +I+ +CR AA+SA+     E+  D +R+   HL TA
Sbjct: 573  EIASVCRRAALSAVRRAVAEDIRDPARL---HLSTA 605



 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 108/269 (40%), Positives = 159/269 (59%), Gaps = 17/269 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P + +EDVGG +    ++ E +E P ++ E F+R+G   P G+L++GPPGC KTL+ARA+
Sbjct: 87   PSLSYEDVGGLKPQLMRIREMIELPLRYPEVFERLGVDAPKGVLLYGPPGCGKTLIARAI 146

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E    F +V GPE+  K+ GESE  +R +F +A   AP+I+F DE+D +A  R  E+ 
Sbjct: 147  AHECDAAFFSVSGPEVIHKFYGESEAHLRKIFEEAARKAPAIVFLDEVDAIAPKR--ETV 204

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V  RV++QLL  +DGL  R  V VIAATN P+ +DPAL RPGRFDR + +  P+   
Sbjct: 205  VGEVEKRVVAQLLALMDGLSGRQQVIVIAATNLPNTLDPALRRPGRFDREIAIPIPDRNG 264

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R E+  IH R +P ++DV++  LA ++ G  GAD+  +C+EAA+  +             
Sbjct: 265  RLEVLEIHSRGMPLAADVDLDRLADITHGFVGADLEALCKEAAMLCLRRLMSTLDLGLRS 324

Query: 998  ---ENLDASRITMQHLKTAIRHVQPSEIH 1023
               E LD   + M    +A+  + PS I 
Sbjct: 325  ISYEQLDRLVVNMDDFLSALAEIDPSAIR 353



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +          LG+   KGVLL+GPPG GKT +AR  AH+    
Sbjct: 94  VGGLKPQLMRIREMIELPLRYPEVFERLGVDAPKGVLLYGPPGCGKTLIARAIAHECDAA 153

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F+V+GPEV+ + YGESE  L ++F+ A++ APA+VF+DE+DAIAP R+    E+ +R+V
Sbjct: 154 FFSVSGPEVIHKFYGESEAHLRKIFEEAARKAPAIVFLDEVDAIAPKRETVVGEVEKRVV 213

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATN P++++PALRRPGR DREI I               +
Sbjct: 214 AQLLALMDGLSGRQQVIVIAATNLPNTLDPALRRPGRFDREIAI--------------PI 259

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    RLE+L     GM  +  D +++ L+  THGFVGADL ALC EAA++CLRR
Sbjct: 260 PDRNGRLEVLEIHSRGMPLA-ADVDLDRLADITHGFVGADLEALCKEAAMLCLRR 313



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 128/215 (59%), Gaps = 21/215 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           L+  G +P+KG+LL GPPG GKT LA+  A++ GVN   V GPE++S+  GESE+ + +V
Sbjct: 391 LTRAGAKPSKGILLVGPPGCGKTWLAKAAANECGVNFIPVKGPELMSKYIGESEKGVRDV 450

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG--GEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A  +AP ++F DE+DA+AP R +G  G  + +R+++  L   DG+    GV+V+AAT
Sbjct: 451 FRKARHAAPCLLFFDEIDALAPRRSEGATGAHVPERLLSQFLAEFDGIEELKGVMVLAAT 510

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NR D ++PA+ RPGR D  IEI              A+P PA R EI    L       L
Sbjct: 511 NRIDMLDPAVLRPGRFDEIIEI--------------ALPDPAARREIFDVHL---RRKPL 553

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
            ++V    MA  + GF  A++A++C  AAL  +RR
Sbjct: 554 AADVASDRMAEESSGFSAAEIASVCRRAALSAVRR 588


>gi|424906346|ref|ZP_18329847.1| cell division control protein 48 ATPase of AAA family CDC48 subfamily
            [Burkholderia thailandensis MSMB43]
 gi|390928268|gb|EIP85673.1| cell division control protein 48 ATPase of AAA family CDC48 subfamily
            [Burkholderia thailandensis MSMB43]
          Length = 713

 Score =  272 bits (696), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 136/276 (49%), Positives = 186/276 (67%), Gaps = 8/276 (2%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L + + DF  A  ++ PSA+REV +EVP V+WEDVGG    K QL+EA+EWP K+ E   
Sbjct: 424  LVVNMDDFLSALAEIDPSAIREVFVEVPNVRWEDVGGLGNAKAQLIEALEWPLKYPELLT 483

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            R G +P  GIL+ GPPGC KT +A+A A+E G+NF+ VKGPEL SK++GESEK VR +F 
Sbjct: 484  RAGAKPSKGILLVGPPGCGKTWLAKAAANECGVNFIPVKGPELMSKYIGESEKGVRDVFR 543

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            KAR  AP ++FFDEID LA  R + + G  V +R++SQ L E DG+ +   V V+AATNR
Sbjct: 544  KARHAAPCLLFFDEIDALAPRRSEGATGAHVPERLLSQFLAEFDGIEELKGVMVLAATNR 603

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             D +DPA+LRPGRFD ++ +  P+   R EIF +HLR+ P ++DV    +A  S G + A
Sbjct: 604  IDMLDPAVLRPGRFDEIIEIALPDPAARREIFDVHLRRKPLAADVASDRMAEESSGFSAA 663

Query: 983  DISLICREAAISAI-----EENLDASRITMQHLKTA 1013
            +I+ +CR AA+SA+     E+  D +R+   HL TA
Sbjct: 664  EIASVCRRAALSAVRRAVAEDIRDPARL---HLSTA 696



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 108/269 (40%), Positives = 159/269 (59%), Gaps = 17/269 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P + +EDVGG +    ++ E +E P ++ E F+R+G   P G+L++GPPGC KTL+ARA+
Sbjct: 178  PSLSYEDVGGLKPQLMRIREMIELPLRYPEVFERLGVDAPKGVLLYGPPGCGKTLIARAI 237

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A E    F +V GPE+  K+ GESE  +R +F +A   AP+I+F DE+D +A  R  E+ 
Sbjct: 238  AHECDAAFFSVSGPEVIHKFYGESEAHLRKIFEEAARKAPAIVFLDEVDAIAPKR--ETV 295

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V  RV++QLL  +DGL  R  V VIAATN P+ +DPAL RPGRFDR + +  P+   
Sbjct: 296  VGEVEKRVVAQLLALMDGLSGRQQVIVIAATNLPNTLDPALRRPGRFDREIAIPIPDRNG 355

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R E+  IH R +P ++DV++  LA ++ G  GAD+  +C+EAA+  +             
Sbjct: 356  RLEVLEIHSRGMPLAADVDLDRLADITHGFVGADLEALCKEAAMLCLRRLMSTLDLGLRS 415

Query: 998  ---ENLDASRITMQHLKTAIRHVQPSEIH 1023
               E LD   + M    +A+  + PS I 
Sbjct: 416  ISYEQLDRLVVNMDDFLSALAEIDPSAIR 444



 Score =  200 bits (508), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 150/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +          LG+   KGVLL+GPPG GKT +AR  AH+    
Sbjct: 185 VGGLKPQLMRIREMIELPLRYPEVFERLGVDAPKGVLLYGPPGCGKTLIARAIAHECDAA 244

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F+V+GPEV+ + YGESE  L ++F+ A++ APA+VF+DE+DAIAP R+    E+ +R+V
Sbjct: 245 FFSVSGPEVIHKFYGESEAHLRKIFEEAARKAPAIVFLDEVDAIAPKRETVVGEVEKRVV 304

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VIAATN P++++PALRRPGR DREI I               +
Sbjct: 305 AQLLALMDGLSGRQQVIVIAATNLPNTLDPALRRPGRFDREIAI--------------PI 350

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    RLE+L     GM  +  D +++ L+  THGFVGADL ALC EAA++CLRR
Sbjct: 351 PDRNGRLEVLEIHSRGMPLA-ADVDLDRLADITHGFVGADLEALCKEAAMLCLRR 404



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 128/215 (59%), Gaps = 21/215 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           L+  G +P+KG+LL GPPG GKT LA+  A++ GVN   V GPE++S+  GESE+ + +V
Sbjct: 482 LTRAGAKPSKGILLVGPPGCGKTWLAKAAANECGVNFIPVKGPELMSKYIGESEKGVRDV 541

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDG--GEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           F  A  +AP ++F DE+DA+AP R +G  G  + +R+++  L   DG+    GV+V+AAT
Sbjct: 542 FRKARHAAPCLLFFDEIDALAPRRSEGATGAHVPERLLSQFLAEFDGIEELKGVMVLAAT 601

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NR D ++PA+ RPGR D  IEI              A+P PA R EI    L       L
Sbjct: 602 NRIDMLDPAVLRPGRFDEIIEI--------------ALPDPAARREIFDVHL---RRKPL 644

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
            ++V    MA  + GF  A++A++C  AAL  +RR
Sbjct: 645 AADVASDRMAEESSGFSAAEIASVCRRAALSAVRR 679


>gi|332372578|gb|AEE61431.1| unknown [Dendroctonus ponderosae]
          Length = 424

 Score =  272 bits (695), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 143/373 (38%), Positives = 212/373 (56%), Gaps = 60/373 (16%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F  A  K  PSA+RE ++EVP V WED+GG   VK +L E V++P +H + F
Sbjct: 57   SLAVTMENFRYAMTKSSPSALRETVVEVPNVTWEDIGGLASVKNELQELVQYPVEHPDKF 116

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 117  LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIF 176

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR+ AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 177  DKARSAAPCVLFFDELDSIAKSRGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 236

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE+IFR +LRK P + DV++  +A ++ G +
Sbjct: 237  NRPDIIDPAILRPGRLDQLIYIPLPDEKSREQIFRANLRKSPVAKDVDLVYIAKVTHGFS 296

Query: 981  GADISLICREAAISAI--------------------------EENLDASRITMQHLKTAI 1014
            GAD++ IC+ A   AI                          +E+     IT  H + A+
Sbjct: 297  GADLTEICQRACKLAIRQSIEAEIRRERERAGNAASAAAMDLDEDDPVPEITRAHFEEAM 356

Query: 1015 RH----VQPSEIHSYKELSAKFQRLVHSNAEADESGYQLRPSKSIGSNMWTLIKSISLFL 1070
            R     V  ++I  Y+  +   Q+                 S+  G+N            
Sbjct: 357  RFARRSVSDNDIRKYEMFAQTLQQ-----------------SRGFGTNF----------- 388

Query: 1071 CRFPAGLSQSESG 1083
             RFPAG + ++ G
Sbjct: 389  -RFPAGQAAADQG 400



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 159/316 (50%), Gaps = 39/316 (12%)

Query: 344 ADLTNERSQPQVTESMD------HESNAFVINH---ETKVYLYPPLNAVSKSLREGTLPN 394
           A L +E +  Q+ E MD       + +A V+N      + + Y    +   +LRE     
Sbjct: 25  ASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVTMENFRYAMTKSSPSALRETV--- 81

Query: 395 AQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPG 454
             +E  NV     +DI  L  +  E   L    +    K      G++P++GVL +GPPG
Sbjct: 82  --VEVPNV---TWEDIGGLASVKNELQELVQYPVEHPDK--FLKFGMQPSRGVLFYGPPG 134

Query: 455 TGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDA 514
            GKT LA+  A++   N  +V GPE+++  +GESE  + ++FD A  +AP V+F DELD+
Sbjct: 135 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDS 194

Query: 515 IAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLD 570
           IA +R     D G   + R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRLD
Sbjct: 195 IAKSRGGNVGDAGGA-ADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLD 253

Query: 571 REIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGA 630
           + I I               +P    R +I  A L     +  D ++ Y++  THGF GA
Sbjct: 254 QLIYI--------------PLPDEKSREQIFRANLRKSPVA-KDVDLVYIAKVTHGFSGA 298

Query: 631 DLAALCNEAALVCLRR 646
           DL  +C  A  + +R+
Sbjct: 299 DLTEICQRACKLAIRQ 314



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 6/58 (10%)

Query: 614 DSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI------QTSSDVLHSTGTLFE 665
           D ++E ++  THG VGADLA+LC+EAAL  +R    +      Q  ++VL+S     E
Sbjct: 6   DVDLEQIAAETHGHVGADLASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVTME 63


>gi|383640147|ref|ZP_09952553.1| AAA ATPase [Sphingomonas elodea ATCC 31461]
          Length = 761

 Score =  272 bits (695), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 133/294 (45%), Positives = 191/294 (64%), Gaps = 4/294 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF +A  +V+PSAMREV+++ P V+WEDVGG  + + +L E VE P K  +AF+R+G RP
Sbjct: 449  DFLEALKRVQPSAMREVMVQAPTVRWEDVGGLDDAQMRLKEGVELPLKDPDAFRRLGIRP 508

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G L++GPPG  KTL+A+AVA EA  NF+A K  +L SKW GESE+ +  LFA+AR  A
Sbjct: 509  AKGFLLYGPPGTGKTLLAKAVAREAEANFIATKSSDLLSKWYGESEQQIARLFARARQVA 568

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P +IF DE+D L   RG       V++RV++ +L E+DGL +  +V VI ATNRP+ IDP
Sbjct: 569  PCVIFIDELDSLVPARGGAMGEPQVTERVVNTILAEMDGLEELQSVVVIGATNRPNLIDP 628

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+YVG P++  RE I RI   K+P ++DV++  +A  ++  TGAD+  + 
Sbjct: 629  ALLRPGRFDELVYVGVPDKAGRERILRIQTEKMPLAADVDLGAIAEQTQRYTGADLEDVV 688

Query: 989  REAAISAIEENLDASRITMQHLKTAIRH----VQPSEIHSYKELSAKFQRLVHS 1038
            R A + A+ ++L    +TM H + A++     V P   + Y  +  K ++   S
Sbjct: 689  RRAGLVALRQSLATREVTMAHFEDALKDSRATVTPEMENDYAAMQGKLKQQASS 742



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 116/267 (43%), Positives = 162/267 (60%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG      QL E VE P ++ E F+R+G  PP G+++ GPPG  KT +ARAVA+
Sbjct: 199  VTYDDIGGMAGTIDQLREMVELPLRYPELFQRLGVDPPKGVILHGPPGTGKTRLARAVAN 258

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+  +F  + GPE+     GESE+ +R +F +A  NAPSI+F DEID +A  RG+ +   
Sbjct: 259  ESDASFHLINGPEIMGSAYGESEQRLRQVFEEASKNAPSIVFIDEIDSIAPKRGQVTG-- 316

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                R+++QLL  +DGL  R N+ VIAATNRP+ ID AL RPGRFDR + VG P++  R 
Sbjct: 317  EAEKRLVAQLLTLMDGLEARANIVVIAATNRPEAIDEALRRPGRFDREIVVGVPDDRGRR 376

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI---------EEN--- 999
            EI  IH R +P + DV++ ELA  + G  GAD++ + REAAI A+         EE    
Sbjct: 377  EILGIHTRGMPLADDVDLPELARTTYGFVGADLAALTREAAIEAVRRIMPRLNLEEGTIP 436

Query: 1000 ---LDASRITMQHLKTAIRHVQPSEIH 1023
               LD   +T      A++ VQPS + 
Sbjct: 437  ADVLDTLSVTRDDFLEALKRVQPSAMR 463



 Score =  196 bits (499), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/261 (42%), Positives = 158/261 (60%), Gaps = 18/261 (6%)

Query: 389 EGTLPNAQIEFQNVQATVEQDIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTK 445
           E T    + E++  + +   D++   +GG++     L++++ +          LG+ P K
Sbjct: 178 ENTEVELRTEYEEAKESRRADVTYDDIGGMAGTIDQLREMVELPLRYPELFQRLGVDPPK 237

Query: 446 GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPA 505
           GV+LHGPPGTGKT LAR  A++S  +   +NGPE++   YGESEQ L +VF+ AS++AP+
Sbjct: 238 GVILHGPPGTGKTRLARAVANESDASFHLINGPEIMGSAYGESEQRLRQVFEEASKNAPS 297

Query: 506 VVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRR 565
           +VFIDE+D+IAP R     E  +R+VA LL LMDG+     ++VIAATNRP++I+ ALRR
Sbjct: 298 IVFIDEIDSIAPKRGQVTGEAEKRLVAQLLTLMDGLEARANIVVIAATNRPEAIDEALRR 357

Query: 566 PGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH 625
           PGR DREI +               VP    R EIL     GM  +  D ++  L+  T+
Sbjct: 358 PGRFDREIVV--------------GVPDDRGRREILGIHTRGMPLA-DDVDLPELARTTY 402

Query: 626 GFVGADLAALCNEAALVCLRR 646
           GFVGADLAAL  EAA+  +RR
Sbjct: 403 GFVGADLAALTREAAIEAVRR 423



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 128/237 (54%), Gaps = 18/237 (7%)

Query: 413 LGGLSKEYAILKD-IIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      LK+ + +          LG+RP KG LL+GPPGTGKT LA+  A ++  N
Sbjct: 477 VGGLDDAQMRLKEGVELPLKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAEAN 536

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD--GGEELSQR 529
                  +++S+ YGESEQ +  +F  A Q AP V+FIDELD++ PAR    G  ++++R
Sbjct: 537 FIATKSSDLLSKWYGESEQQIARLFARARQVAPCVIFIDELDSLVPARGGAMGEPQVTER 596

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V T+L  MDG+     V+VI ATNRP+ I+PAL RPGR D  + +              
Sbjct: 597 VVNTILAEMDGLEELQSVVVIGATNRPNLIDPALLRPGRFDELVYV-------------- 642

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            VP  A R  IL      M  +  D ++  ++  T  + GADL  +   A LV LR+
Sbjct: 643 GVPDKAGRERILRIQTEKMPLA-ADVDLGAIAEQTQRYTGADLEDVVRRAGLVALRQ 698


>gi|449477670|ref|XP_004155087.1| PREDICTED: cell division cycle protein 48 homolog [Cucumis sativus]
          Length = 728

 Score =  272 bits (695), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 126/255 (49%), Positives = 176/255 (69%), Gaps = 1/255 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V W+D+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 468  FQTALGSSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 527

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 528  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 587

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 588  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDP 647

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E+ R +IF+  LRK P + DVN+  LA  + G +GADI+ IC
Sbjct: 648  ALLRPGRLDQLIYIPLPDESSRLQIFKACLRKSPVAKDVNLSALAGYTHGFSGADITEIC 707

Query: 989  REAAISAIEENLDAS 1003
            + A   AI EN++ +
Sbjct: 708  QRACKYAIRENIEKN 722



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 162/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 216  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 275

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DE+D +A  R K    
Sbjct: 276  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHG- 334

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V +I ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 335  -EVERRIVSQLLTLMDGLKTRAHVIIIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 393

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+  IH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 394  LEVLSIHTKNMKLAEDVDLERVARDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 453

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  ++ +H +TA+    PS + 
Sbjct: 454  DAEVLNSMAVSNEHFQTALGSSNPSALR 481



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/344 (37%), Positives = 194/344 (56%), Gaps = 34/344 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 222 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 281

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDELD+IAP R+    E+ +R+V
Sbjct: 282 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIV 341

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V++I ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 342 SQLLTLMDGLKTRAHVIIIGATNRPNSIDPALRRFGRFDREIDI--------------GV 387

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
           P    RLE+L      M+ +  D ++E ++  THG+VGADLAALC EAAL C+R    + 
Sbjct: 388 PDEVGRLEVLSIHTKNMKLA-EDVDLERVARDTHGYVGADLAALCTEAALQCIREKMDVI 446

Query: 651 -----QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
                   ++VL+S     E   H  T L  S+ S     + R+ +      + D    L
Sbjct: 447 DLEDETIDAEVLNSMAVSNE---HFQTALGSSNPS-----ALRETVVEVPNVSWDDIGGL 498

Query: 706 LSSSLPLRGTVS---EIADNFHN-GVSDSSGGMFMSEKGCALKL 745
            +    L+ TV    E  + F   G+S S G +F    GC   L
Sbjct: 499 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 542



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 119/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 519 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 578

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 579 FDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA-ADRVLNQLLTEMDGMTAKKTVFIIG 637

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P  + RL+I  A L     +
Sbjct: 638 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDESSRLQIFKACLRKSPVA 683

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D  +  L+  THGF GAD+  +C  A    +R
Sbjct: 684 -KDVNLSALAGYTHGFSGADITEICQRACKYAIR 716


>gi|291297966|ref|YP_003509244.1| adenosinetriphosphatase [Stackebrandtia nassauensis DSM 44728]
 gi|290567186|gb|ADD40151.1| Adenosinetriphosphatase [Stackebrandtia nassauensis DSM 44728]
          Length = 749

 Score =  272 bits (695), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 131/284 (46%), Positives = 189/284 (66%), Gaps = 1/284 (0%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            +++G A  L+  DF  A   VRPS+M +  LE+ ++  +DVG   EVK  L EAV WP  
Sbjct: 449  AKEGGATALQPQDFTAALATVRPSSMADSTLELAQITLDDVGDMTEVKQTLTEAVLWPLT 508

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            + + F R+G   P G+L++GPPGC KT + +A+A     N ++VKG EL +KWVGESE +
Sbjct: 509  YPDTFTRLGIEAPRGVLLYGPPGCGKTYLVKAIAGSGRSNVMSVKGAELLNKWVGESEAS 568

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTV 916
            VR LF +AR  AP+++FFDE+D LA +RG++S+    +DRV++ LL ELDG+    NV V
Sbjct: 569  VRELFRRARQAAPTLLFFDELDALAPVRGQDSNS-GTADRVVASLLTELDGVESLRNVVV 627

Query: 917  IAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS 976
            I ATNRPD IDPALLRPGR +RL+YV PP+   R  I R   + +P +SDV++ +L    
Sbjct: 628  IGATNRPDMIDPALLRPGRLERLVYVPPPDAEARAAILRSASKDVPLASDVDLDDLGAAL 687

Query: 977  EGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            +  + AD + + RE+A+SA+ E++DAS +T +H+  A   V+PS
Sbjct: 688  DNYSAADCAALIRESALSAMRESMDASEVTREHVADARTRVRPS 731



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 144/264 (54%), Gaps = 32/264 (12%)

Query: 386 SLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTK 445
           S+ + TL  AQI   +V      D++++     +  + + ++   +   T + LG+   +
Sbjct: 473 SMADSTLELAQITLDDVG-----DMTEV-----KQTLTEAVLWPLTYPDTFTRLGIEAPR 522

Query: 446 GVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPA 505
           GVLL+GPPG GKT L +  A     N+ +V G E++++  GESE ++ E+F  A Q+AP 
Sbjct: 523 GVLLYGPPGCGKTYLVKAIAGSGRSNVMSVKGAELLNKWVGESEASVRELFRRARQAAPT 582

Query: 506 VVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
           ++F DELDA+AP R +D     + R+VA+LL  +DGV     V+VI ATNRPD I+PAL 
Sbjct: 583 LLFFDELDALAPVRGQDSNSGTADRVVASLLTELDGVESLRNVVVIGATNRPDMIDPALL 642

Query: 565 RPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLS 621
           RPGRL+R + +   D     ++L+++   VP  +                  D +++ L 
Sbjct: 643 RPGRLERLVYVPPPDAEARAAILRSASKDVPLAS------------------DVDLDDLG 684

Query: 622 MATHGFVGADLAALCNEAALVCLR 645
            A   +  AD AAL  E+AL  +R
Sbjct: 685 AALDNYSAADCAALIRESALSAMR 708



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 13/253 (5%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V +E++ G R    QL E ++    H+E    +GT    GIL+ GP G  K+ + R+VA 
Sbjct: 233  VDFEELAGVRAEAEQLRELLDLAFHHREVLATVGTEISLGILVTGPSGTGKSTLIRSVAK 292

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E   N + V  P++ +    ++  A+R   AK     P ++    ++ LA     ES  +
Sbjct: 293  EVKANLVHVWAPDIAALAANDANAALRRQVAK--LTPPGVLMVSGVEALAP--RDESTPM 348

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
            S   R   + ++E          +V+  T  P+ + P L + G  +  + +  P+   R+
Sbjct: 349  STVFRKTVRTILE-------AGHSVVCTTANPEAVSPELRQSGLLEHEIGIPMPDALARK 401

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--ASRITMQH 1009
            E+     + +  +++V++ E+A  + G   AD+S + REA + A     +  A+ +  Q 
Sbjct: 402  ELLTAFTQTMRLAAEVHLEEVAAKAPGFVAADLSTLVREAGVRAAMRAKEGGATALQPQD 461

Query: 1010 LKTAIRHVQPSEI 1022
               A+  V+PS +
Sbjct: 462  FTAALATVRPSSM 474



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 29/236 (12%)

Query: 409 DISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           D  +L G+  E   L++++ ++   +  L+++G   + G+L+ GP GTGK++L R  A +
Sbjct: 234 DFEELAGVRAEAEQLRELLDLAFHHREVLATVGTEISLGILVTGPSGTGKSTLIRSVAKE 293

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELS 527
              NL  V  P++ +    ++  AL      A  + P V+ +  ++A+AP  +D    +S
Sbjct: 294 VKANLVHVWAPDIAALAANDANAALRR--QVAKLTPPGVLMVSGVEALAP--RDESTPMS 349

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
                T+  +++      G  V+  T  P+++ P LR+ G L+ EI I M          
Sbjct: 350 TVFRKTVRTILEA-----GHSVVCTTANPEAVSPELRQSGLLEHEIGIPM---------- 394

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEV--EYLSMATHGFVGADLAALCNEAAL 641
               P    R E+L A    M    L +EV  E ++    GFV ADL+ L  EA +
Sbjct: 395 ----PDALARKELLTAFTQTMR---LAAEVHLEEVAAKAPGFVAADLSTLVREAGV 443


>gi|395491112|ref|ZP_10422691.1| AAA ATPase [Sphingomonas sp. PAMC 26617]
          Length = 760

 Score =  272 bits (695), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 133/290 (45%), Positives = 190/290 (65%), Gaps = 4/290 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V+PSAMREV++E P+V+W+DVGG    + +L E VE P K  +AF+R+G RP
Sbjct: 450  DFLDALKRVQPSAMREVMVEAPRVRWDDVGGLDSAQMRLKEGVELPLKDPDAFRRLGIRP 509

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G L++GPPG  KTL+A+AVA EA  NF+A K  +L SKW GESE+ +  LFA+AR  A
Sbjct: 510  AKGFLLYGPPGTGKTLLAKAVAREAQANFIATKSSDLLSKWYGESEQQIAKLFARARQVA 569

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P +IF DE+D L   RG       V++RV++ +L E+DGL +  +V VI ATNRP+ IDP
Sbjct: 570  PCVIFIDELDSLVPARGSGGGEPQVTERVVNTILAEMDGLEELQSVVVIGATNRPNLIDP 629

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+YVG P+   R+ I  I   K+P + DV++  +A  ++  TGAD+  + 
Sbjct: 630  ALLRPGRFDELIYVGVPDRAGRKRILTIQTGKMPLAEDVDLDVVAGRTDRFTGADLEDLV 689

Query: 989  REAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAKFQR 1034
            R A ++A+ E++  S++TM H K A+      V P     Y+ +SA+ ++
Sbjct: 690  RRAGLTALRESMSVSQVTMAHFKIALGDSRASVTPELEREYEAMSARLKQ 739



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 157/267 (58%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG      QL E VE P ++ E F+R+G  PP G+L+ GPPG  KT +ARAVA+
Sbjct: 200  VTYDDIGGMGPTIDQLREMVELPLRYPELFQRLGVDPPKGVLLHGPPGTGKTRLARAVAN 259

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+   F  + GPE+     GESE  +R +F +A   APSI+F DEID +A  RG+ S   
Sbjct: 260  ESAAEFFLINGPEIMGSAYGESEGKLRQVFEEAAKAAPSIVFIDEIDSIAPKRGQVSG-- 317

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                R+++QLL  +DGL  R NV VIAATNRP+ ID AL RPGRFDR + VG P+E  R 
Sbjct: 318  EAEKRLVAQLLTLMDGLESRANVVVIAATNRPEAIDEALRRPGRFDREIVVGVPDERGRR 377

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI  IH R +P    V++ ELA  + G  GAD++ + REAAI A+               
Sbjct: 378  EILGIHTRGMPLGDKVDLGELARTTYGFVGADLAALAREAAIEAVRKLMPRLNLSEGTIP 437

Query: 998  -ENLDASRITMQHLKTAIRHVQPSEIH 1023
             E LD   +T +    A++ VQPS + 
Sbjct: 438  PEILDTLAVTREDFLDALKRVQPSAMR 464



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 152/254 (59%), Gaps = 22/254 (8%)

Query: 398 EFQNVQATVEQDIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPG 454
           E++  +     D++   +GG+      L++++ +          LG+ P KGVLLHGPPG
Sbjct: 188 EYEEPKEARRADVTYDDIGGMGPTIDQLREMVELPLRYPELFQRLGVDPPKGVLLHGPPG 247

Query: 455 TGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDA 514
           TGKT LAR  A++S    F +NGPE++   YGESE  L +VF+ A+++AP++VFIDE+D+
Sbjct: 248 TGKTRLARAVANESAAEFFLINGPEIMGSAYGESEGKLRQVFEEAAKAAPSIVFIDEIDS 307

Query: 515 IAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIE 574
           IAP R     E  +R+VA LL LMDG+     V+VIAATNRP++I+ ALRRPGR DREI 
Sbjct: 308 IAPKRGQVSGEAEKRLVAQLLTLMDGLESRANVVVIAATNRPEAIDEALRRPGRFDREIV 367

Query: 575 IDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADL 632
           +               VP    R EIL     GM    L  +V+   L+  T+GFVGADL
Sbjct: 368 V--------------GVPDERGRREILGIHTRGMP---LGDKVDLGELARTTYGFVGADL 410

Query: 633 AALCNEAALVCLRR 646
           AAL  EAA+  +R+
Sbjct: 411 AALAREAAIEAVRK 424



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 130/236 (55%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKD-IIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      LK+ + +          LG+RP KG LL+GPPGTGKT LA+  A ++  N
Sbjct: 478 VGGLDSAQMRLKEGVELPLKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAQAN 537

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQR 529
                  +++S+ YGESEQ + ++F  A Q AP V+FIDELD++ PAR  GG E  +++R
Sbjct: 538 FIATKSSDLLSKWYGESEQQIAKLFARARQVAPCVIFIDELDSLVPARGSGGGEPQVTER 597

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V T+L  MDG+     V+VI ATNRP+ I+PAL RPGR D  I +              
Sbjct: 598 VVNTILAEMDGLEELQSVVVIGATNRPNLIDPALLRPGRFDELIYV-------------- 643

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            VP  A R  IL  + +G      D +++ ++  T  F GADL  L   A L  LR
Sbjct: 644 GVPDRAGRKRIL-TIQTGKMPLAEDVDLDVVAGRTDRFTGADLEDLVRRAGLTALR 698


>gi|356508699|ref|XP_003523092.1| PREDICTED: cell division cycle protein 48 homolog [Glycine max]
          Length = 814

 Score =  272 bits (695), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 149/350 (42%), Positives = 209/350 (59%), Gaps = 29/350 (8%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V W+D+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 464  FQTALSSSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 523

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 524  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 583

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 584  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDP 643

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E+ R +IF+  LRK P S DV++  LA  + G +GADI+ IC
Sbjct: 644  ALLRPGRLDQLIYIPLPDESSRLQIFKACLRKSPISKDVDLSALARFTHGFSGADITEIC 703

Query: 989  REAAISAIEENLDASRITMQHLK----TAIRHVQPSEIHSYK----ELSAKFQRLVHSNA 1040
            + A   AI E+++   I  +  K     A+      E+   K    E S KF R   S +
Sbjct: 704  QRACKYAIREDIEKG-IEKERRKRENPEAMEEDDTDEVPEIKPAHFEESMKFAR--RSVS 760

Query: 1041 EADESGYQ-----LRPSKSIGSNMWTLIKSISLFLCRFPAGLSQSESGSS 1085
            +AD   YQ     L+ S+  GS              RFP     + +G+S
Sbjct: 761  DADIRKYQLFAQTLQQSRGFGSEF------------RFPDQNENTAAGAS 798



 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 163/267 (61%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 213  VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 272

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+PSIIF DE+D +A  R K     
Sbjct: 273  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPSIIFIDELDSIAPKREKTHG-- 330

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R 
Sbjct: 331  EVERRIVSQLLTLMDGLKTRSHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 390

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD---------- 1001
            E+ RIH + +  S +V++ ++A  + G  GAD++ +C EAA+  I E +D          
Sbjct: 391  EVLRIHTKNMKLSDNVDLEKVARDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETID 450

Query: 1002 -----ASRITMQHLKTAIRHVQPSEIH 1023
                 +  +T +H +TA+    PS + 
Sbjct: 451  AEVLNSMAVTNEHFQTALSSSNPSALR 477



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/344 (37%), Positives = 194/344 (56%), Gaps = 34/344 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 218 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 277

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++P+++FIDELD+IAP R+    E+ +R+V
Sbjct: 278 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPSIIFIDELDSIAPKREKTHGEVERRIV 337

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 338 SQLLTLMDGLKTRSHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 383

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
           P    RLE+L      M+ S  + ++E ++  THG+VGADLAALC EAAL C+R    + 
Sbjct: 384 PDEVGRLEVLRIHTKNMKLS-DNVDLEKVARDTHGYVGADLAALCTEAALQCIREKMDVI 442

Query: 651 -----QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
                   ++VL+S     E   H  T L  S+ S     + R+ +      + D    L
Sbjct: 443 DLEDETIDAEVLNSMAVTNE---HFQTALSSSNPS-----ALRETVVEVPNVSWDDIGGL 494

Query: 706 LSSSLPLRGTVS---EIADNFHN-GVSDSSGGMFMSEKGCALKL 745
            +    L+ TV    E  + F   G+S S G +F    GC   L
Sbjct: 495 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 538



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 120/214 (56%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 515 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 574

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 575 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMTAKKTVFIIG 633

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P  + RL+I  A L     S
Sbjct: 634 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDESSRLQIFKACLRKSPIS 679

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  THGF GAD+  +C  A    +R
Sbjct: 680 -KDVDLSALARFTHGFSGADITEICQRACKYAIR 712


>gi|161528731|ref|YP_001582557.1| ATPase AAA [Nitrosopumilus maritimus SCM1]
 gi|160340032|gb|ABX13119.1| AAA family ATPase, CDC48 subfamily [Nitrosopumilus maritimus SCM1]
          Length = 721

 Score =  272 bits (695), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 133/280 (47%), Positives = 195/280 (69%), Gaps = 8/280 (2%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            ++K++L+DF  A  +V P+AMREV +E PKV W+DVGG  E+K  L + +         F
Sbjct: 419  SMKIKLIDFYDAMHEVVPTAMREVYVERPKVWWQDVGGLDEIKKSLTDNLILAMNEPGKF 478

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             ++G +PP G L++GPPGC KTL+ RA+A+E G N + V+GPE+ SKWVGESEKAVR +F
Sbjct: 479  TKMGIKPPKGALIYGPPGCGKTLLGRALATETGANMILVRGPEILSKWVGESEKAVREIF 538

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVEL-DGLHQRVNVTVIAAT 920
             KA+A++P ++ FDE+D LA  R K  +G  V + ++SQLL E+ DG+  R  V VI  T
Sbjct: 539  RKAKASSPCVVIFDELDSLA--RSKSGEG-GVGENILSQLLTEIEDGVSSR--VVVIGIT 593

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD +D +LLR GR D +LYV PP+E  R EI +I  +K+P +SDV ++E+A  ++  T
Sbjct: 594  NRPDVVDNSLLRTGRLDLVLYVEPPDEKGRLEIIKILTKKMPLTSDVKLQEIAVATQNYT 653

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            GAD++ +CREAA+ A++ N  A++I+ Q    +++HV+PS
Sbjct: 654  GADLAALCREAAVQAMQNN--ATKISSQDFANSLKHVRPS 691



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 112/230 (48%), Positives = 155/230 (67%), Gaps = 2/230 (0%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V +E+VGG  E    + E VE P +H E F R+G  P +GIL++GPPGC KTL+A+ +A
Sbjct: 175  RVTYEEVGGLGEKVKAMREIVELPLRHPELFSRLGIEPHSGILLYGPPGCGKTLLAKVMA 234

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            SE+  N   + GPE+ +K+ GE+E  +R +F +A+ N+PSIIF DEID +A  R +E+ G
Sbjct: 235  SESEANMFPINGPEIMNKYYGETEAKLRDIFKEAKDNSPSIIFIDEIDAIAPKR-EEAYG 293

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV++QLL  +DGL+ R NV V+ ATNRPD +DPAL RPGRFDR   +  PNE  R
Sbjct: 294  -DVEKRVVAQLLALMDGLNDRGNVIVLGATNRPDSVDPALRRPGRFDREFEISVPNEDGR 352

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 1000
             EI +IH R +P   D+++++LA    G TGADI  +CREAA+ +I   L
Sbjct: 353  IEILQIHTRGMPIDEDIDLKDLASELHGYTGADIKSLCREAAMKSIRRYL 402



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 103/251 (41%), Positives = 160/251 (63%), Gaps = 24/251 (9%)

Query: 400 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 458
           + V+ T E+    +GGL ++   +++I+ +        S LG+ P  G+LL+GPPG GKT
Sbjct: 172 RKVRVTYEE----VGGLGEKVKAMREIVELPLRHPELFSRLGIEPHSGILLYGPPGCGKT 227

Query: 459 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 518
            LA++ A +S  N+F +NGPE++++ YGE+E  L ++F  A  ++P+++FIDE+DAIAP 
Sbjct: 228 LLAKVMASESEANMFPINGPEIMNKYYGETEAKLRDIFKEAKDNSPSIIFIDEIDAIAPK 287

Query: 519 RKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMS 578
           R++   ++ +R+VA LL LMDG+     V+V+ ATNRPDS++PALRRPGR DRE EI   
Sbjct: 288 REEAYGDVEKRVVAQLLALMDGLNDRGNVIVLGATNRPDSVDPALRRPGRFDREFEI--- 344

Query: 579 FLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT--HGFVGADLAALC 636
                      +VP+   R+EIL     GM    +D +++   +A+  HG+ GAD+ +LC
Sbjct: 345 -----------SVPNEDGRIEILQIHTRGMP---IDEDIDLKDLASELHGYTGADIKSLC 390

Query: 637 NEAALVCLRRY 647
            EAA+  +RRY
Sbjct: 391 REAAMKSIRRY 401



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 155/280 (55%), Gaps = 31/280 (11%)

Query: 382 AVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKD-IIISSSVKSTLSSLG 440
            V  ++RE  +   ++ +Q+V           GGL +    L D +I++ +     + +G
Sbjct: 434 VVPTAMREVYVERPKVWWQDV-----------GGLDEIKKSLTDNLILAMNEPGKFTKMG 482

Query: 441 LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSAS 500
           ++P KG L++GPPG GKT L R  A ++G N+  V GPE++S+  GESE+A+ E+F  A 
Sbjct: 483 IKPPKGALIYGPPGCGKTLLGRALATETGANMILVRGPEILSKWVGESEKAVREIFRKAK 542

Query: 501 QSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLN-LMDGVCRTDGVLVIAATNRPDSI 559
            S+P VV  DELD++A + K G   + + +++ LL  + DGV  +  V+VI  TNRPD +
Sbjct: 543 ASSPCVVIFDELDSLARS-KSGEGGVGENILSQLLTEIEDGV--SSRVVVIGITNRPDVV 599

Query: 560 EPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEY 619
           + +L R GRLD  + ++               P    RLEI+  L   M  +  D +++ 
Sbjct: 600 DNSLLRTGRLDLVLYVEP--------------PDEKGRLEIIKILTKKMPLT-SDVKLQE 644

Query: 620 LSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHS 659
           +++AT  + GADLAALC EAA+  ++  +   +S D  +S
Sbjct: 645 IAVATQNYTGADLAALCREAAVQAMQNNATKISSQDFANS 684


>gi|115476404|ref|NP_001061798.1| Os08g0413000 [Oryza sativa Japonica Group]
 gi|37806195|dbj|BAC99698.1| putative cell division cycle protein [Oryza sativa Japonica Group]
 gi|113623767|dbj|BAF23712.1| Os08g0413000 [Oryza sativa Japonica Group]
 gi|125603399|gb|EAZ42724.1| hypothetical protein OsJ_27296 [Oryza sativa Japonica Group]
          Length = 848

 Score =  272 bits (695), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 139/304 (45%), Positives = 195/304 (64%), Gaps = 19/304 (6%)

Query: 748  VDFEKARMKV-RPSAMREV-ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIG 805
            +D  K  M+V +PSA+RE  I+EVPKV W+D+GG  EVK +L E V++P +H E F   G
Sbjct: 460  MDHLKFAMEVTKPSALRETGIVEVPKVSWDDIGGLGEVKRELQETVQYPVEHPEMFDLFG 519

Query: 806  TRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR 865
              P  G+L +GPPGC KT+MA+A+A E   NF+++KGPEL + W GESE  VR+LF KAR
Sbjct: 520  MSPSRGVLFYGPPGCGKTMMAKAIAKECKANFISIKGPELLTMWFGESEGNVRNLFDKAR 579

Query: 866  ANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
             +AP I+FFDE+D +A  RG    D     DRV++QLL E+DG++ +  V VI ATNRPD
Sbjct: 580  QSAPCILFFDELDSIAVKRGNSVGDAGGTPDRVLNQLLTEMDGINAKKTVFVIGATNRPD 639

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
             IDPA+LRPGR D+L+Y+  P+ + R EIFR +LRK P S  V++  +A  ++G +GADI
Sbjct: 640  IIDPAMLRPGRLDQLIYIPLPDASSRLEIFRANLRKAPMSRHVDLPAMAASTDGFSGADI 699

Query: 985  SLICREAAISAIEENLDAS------------RITMQHLKTAIRHVQPS----EIHSYKEL 1028
              IC+ A   A+ E +  S             +T+ H K+A++H + S    ++  Y+  
Sbjct: 700  KEICQRACKLAVREVVQKSTLVGKALAMAGAELTVDHFKSAMKHARKSVSELDVIKYEYF 759

Query: 1029 SAKF 1032
              KF
Sbjct: 760  KHKF 763



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/265 (46%), Positives = 165/265 (62%), Gaps = 17/265 (6%)

Query: 774  WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 833
            ++DVGG R+   Q+ E VE P +H + F+ +G RPP GIL++GPPG  KTL+ARA+A+E+
Sbjct: 214  YDDVGGVRKQLAQIRELVELPLRHPKLFQTLGVRPPKGILLYGPPGTGKTLLARAIAAES 273

Query: 834  GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 893
            G +F+ V GPE+ S   GESE  +R++FA+A A APSI+F DEID +A  R K      V
Sbjct: 274  GAHFVVVNGPEIMSGMPGESEANLRAVFAEADAAAPSIVFMDEIDSIAPSREKAHG--EV 331

Query: 894  SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 953
              RV+SQLL  +DGL  R  V VI ATNRP+ +DPAL R GRFDR L +G P+E  R EI
Sbjct: 332  ERRVVSQLLTLMDGLRPRAQVIVIGATNRPNSLDPALRRFGRFDRELDIGVPDELGRLEI 391

Query: 954  FRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRI-------- 1005
             RIH + +P S DV++  +   + G  G+D++ +C EAA+  I E LD   I        
Sbjct: 392  LRIHTKNMPLSDDVDLERVGKDTHGFVGSDLASLCSEAAMQCIREKLDIIDIENDTIDVE 451

Query: 1006 -------TMQHLKTAIRHVQPSEIH 1023
                   TM HLK A+   +PS + 
Sbjct: 452  ILNSLTVTMDHLKFAMEVTKPSALR 476



 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/234 (45%), Positives = 151/234 (64%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         +LG+RP KG+LL+GPPGTGKT LAR  A +SG +
Sbjct: 217 VGGVRKQLAQIRELVELPLRHPKLFQTLGVRPPKGILLYGPPGTGKTLLARAIAAESGAH 276

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
              VNGPE++S   GESE  L  VF  A  +AP++VF+DE+D+IAP+R+    E+ +R+V
Sbjct: 277 FVVVNGPEIMSGMPGESEANLRAVFAEADAAAPSIVFMDEIDSIAPSREKAHGEVERRVV 336

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+S++PALRR GR DRE++I               V
Sbjct: 337 SQLLTLMDGLRPRAQVIVIGATNRPNSLDPALRRFGRFDRELDI--------------GV 382

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEIL      M  S  D ++E +   THGFVG+DLA+LC+EAA+ C+R
Sbjct: 383 PDELGRLEILRIHTKNMPLS-DDVDLERVGKDTHGFVGSDLASLCSEAAMQCIR 435



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/214 (38%), Positives = 119/214 (55%), Gaps = 26/214 (12%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G+ P++GVL +GPPG GKT +A+  A +   N  ++ GPE+++  +GESE  +  +FD 
Sbjct: 518 FGMSPSRGVLFYGPPGCGKTMMAKAIAKECKANFISIKGPELLTMWFGESEGNVRNLFDK 577

Query: 499 ASQSAPAVVFIDELDAIAPARKD-----GGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 553
           A QSAP ++F DELD+IA  R +     GG     R++  LL  MDG+     V VI AT
Sbjct: 578 ARQSAPCILFFDELDSIAVKRGNSVGDAGGT--PDRVLNQLLTEMDGINAKKTVFVIGAT 635

Query: 554 NRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLL 613
           NRPD I+PA+ RPGRLD+ I I               +P  + RLEI  A    +  + +
Sbjct: 636 NRPDIIDPAMLRPGRLDQLIYI--------------PLPDASSRLEIFRA---NLRKAPM 678

Query: 614 DSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
              V+  +MA  T GF GAD+  +C  A  + +R
Sbjct: 679 SRHVDLPAMAASTDGFSGADIKEICQRACKLAVR 712


>gi|194336865|ref|YP_002018659.1| ATPase AAA [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309342|gb|ACF44042.1| AAA family ATPase, CDC48 subfamily [Pelodictyon phaeoclathratiforme
            BU-1]
          Length = 715

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 133/261 (50%), Positives = 184/261 (70%), Gaps = 4/261 (1%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L++ + +F  A  +V PSA+REV +EVP VKWEDVGG  E+K  L E VEWP K+ E FK
Sbjct: 424  LEVTMDNFLDAMKEVEPSAIREVFVEVPDVKWEDVGGLDEIKQALKETVEWPLKYAELFK 483

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
            +  T PP GI+++G PG  KT +A+A+ASE+G+NF++VKGP++ ++++GESEK VR LF 
Sbjct: 484  KTDTNPPKGIILYGKPGTGKTYLAKALASESGVNFISVKGPQILNRFIGESEKGVRELFR 543

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGV--SVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             A+ +AP+I+F DEID LA  R   +DGV   V DRV+SQ L E+DG+ +   VTV+AAT
Sbjct: 544  LAKQSAPTILFLDEIDSLAPRR--RNDGVESGVIDRVISQFLTEMDGIEELKGVTVLAAT 601

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NR D+IDPALLR GRFD +  V  P+ + RE IF+IH + +P    V++  LA  ++  T
Sbjct: 602  NRIDRIDPALLRSGRFDLMFEVPLPDLSTREMIFKIHTKNMPLKESVSLNALAEKTDNMT 661

Query: 981  GADISLICREAAISAIEENLD 1001
            GADI  IC++A + AI E +D
Sbjct: 662  GADIQFICQKAKMVAIRELID 682



 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 164/268 (61%), Gaps = 15/268 (5%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            K+ +ED+GG      ++ E +E P K+ E F+R+G  PP G+ ++GPPG  KTL+ RAVA
Sbjct: 177  KITYEDIGGLGNQVQRIREMIELPLKYPEIFERLGVEPPKGVFLYGPPGTGKTLIVRAVA 236

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
             E    F+ + GPE+  K+ GESE  VR++FA+A+++APSIIF DEID +A  R      
Sbjct: 237  QETDAYFINISGPEIMGKYYGESEARVRNIFAEAQSHAPSIIFIDEIDAIAPKREDMGGE 296

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV++QLL  +DGL  R  V VI ATN P+ IDPAL RPGRFDR + +  P++  R
Sbjct: 297  KQVEKRVVAQLLSLMDGLESRGKVIVIGATNIPNSIDPALRRPGRFDREISISIPDKKGR 356

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE-----NLDASRI 1005
             EI  IH R IP S DV++ ++A ++ G  GAD+  + REAA++A+ +     N + S I
Sbjct: 357  LEILHIHTRGIPLSEDVDMSKIADITHGFVGADLEALAREAAMTALRKILPRINFELSEI 416

Query: 1006 ----------TMQHLKTAIRHVQPSEIH 1023
                      TM +   A++ V+PS I 
Sbjct: 417  PYELLMQLEVTMDNFLDAMKEVEPSAIR 444



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 146/237 (61%), Gaps = 18/237 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  +   ++++I +          LG+ P KGV L+GPPGTGKT + R  A ++   
Sbjct: 183 IGGLGNQVQRIREMIELPLKYPEIFERLGVEPPKGVFLYGPPGTGKTLIVRAVAQETDAY 242

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD-GGE-ELSQR 529
              ++GPE++ + YGESE  +  +F  A   AP+++FIDE+DAIAP R+D GGE ++ +R
Sbjct: 243 FINISGPEIMGKYYGESEARVRNIFAEAQSHAPSIIFIDEIDAIAPKREDMGGEKQVEKR 302

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +VA LL+LMDG+     V+VI ATN P+SI+PALRRPGR DREI I              
Sbjct: 303 VVAQLLSLMDGLESRGKVIVIGATNIPNSIDPALRRPGRFDREISI-------------- 348

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           ++P    RLEILH    G+  S  D ++  ++  THGFVGADL AL  EAA+  LR+
Sbjct: 349 SIPDKKGRLEILHIHTRGIPLS-EDVDMSKIADITHGFVGADLEALAREAAMTALRK 404



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 121/205 (59%), Gaps = 17/205 (8%)

Query: 443 PTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQS 502
           P KG++L+G PGTGKT LA+  A +SGVN  +V GP+++++  GESE+ + E+F  A QS
Sbjct: 489 PPKGIILYGKPGTGKTYLAKALASESGVNFISVKGPQILNRFIGESEKGVRELFRLAKQS 548

Query: 503 APAVVFIDELDAIAPARKDGGEE--LSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 560
           AP ++F+DE+D++AP R++ G E  +  R+++  L  MDG+    GV V+AATNR D I+
Sbjct: 549 APTILFLDEIDSLAPRRRNDGVESGVIDRVISQFLTEMDGIEELKGVTVLAATNRIDRID 608

Query: 561 PALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYL 620
           PAL R GR D   E+ +  L            S  + +  +H     ++ S+    +  L
Sbjct: 609 PALLRSGRFDLMFEVPLPDL------------STREMIFKIHTKNMPLKESV---SLNAL 653

Query: 621 SMATHGFVGADLAALCNEAALVCLR 645
           +  T    GAD+  +C +A +V +R
Sbjct: 654 AEKTDNMTGADIQFICQKAKMVAIR 678


>gi|335437850|ref|ZP_08560608.1| AAA family ATPase, CDC48 subfamily protein [Halorhabdus tiamatea
            SARL4B]
 gi|335438139|ref|ZP_08560889.1| AAA family ATPase, CDC48 subfamily protein [Halorhabdus tiamatea
            SARL4B]
 gi|334892828|gb|EGM31055.1| AAA family ATPase, CDC48 subfamily protein [Halorhabdus tiamatea
            SARL4B]
 gi|334894011|gb|EGM32219.1| AAA family ATPase, CDC48 subfamily protein [Halorhabdus tiamatea
            SARL4B]
          Length = 731

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 136/281 (48%), Positives = 182/281 (64%), Gaps = 12/281 (4%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            D E A   + PS MREV  EVP V W+D+GG      +L E VEWP +  + F+++ T P
Sbjct: 439  DIESALQGIEPSGMREVFSEVPDVSWDDIGGLDHEIQRLQELVEWPIECPQMFEKLSTDP 498

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
             TG+L++GPPG  KT++A+AVA+E   NF++VKGPEL SKWVGES + VR +FAKAR NA
Sbjct: 499  STGVLLYGPPGTGKTMLAKAVANETSSNFISVKGPELQSKWVGESAEQVREIFAKARENA 558

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            PS++FFDE+D LA  R   SDG  V++ ++SQLL ELDGL +   V VI ATNRP  ID 
Sbjct: 559  PSVVFFDEVDALAGQRQDGSDGGGVTNSIVSQLLTELDGLSEVEPVVVIGATNRPKAIDE 618

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD  + V  P++  RE+IF+   R  P + DV+  +LA  +EG +GADI  IC
Sbjct: 619  ALLRPGRFDEHIKVDLPDKEGREQIFQAITRDKPVAEDVDFNQLAQETEGISGADIDSIC 678

Query: 989  REAAISA------------IEENLDASRITMQHLKTAIRHV 1017
            REAA+              ++E  D + +   H + AI++V
Sbjct: 679  REAAMEVARDYFQEVHPWTVDEIPDDTTVGEHHFRRAIQNV 719



 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 102/229 (44%), Positives = 157/229 (68%), Gaps = 2/229 (0%)

Query: 769 VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 828
           +P V++ED+GG  E    + E +E P +H E F ++G  PP G+L+ GPPG  KTL+A+A
Sbjct: 186 LPDVQYEDIGGLSEEIAHIREMIEVPMRHPELFNKLGVEPPRGVLLHGPPGTGKTLLAQA 245

Query: 829 VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 888
           VA+E   ++ ++ GPE+ SK+ GESE+ +R +F +A+ N P+I+F DE+D +A  R    
Sbjct: 246 VANEVDASYYSISGPEIMSKYHGESEEKLRDIFERAQQNEPAIVFMDEVDSIAPDR--TD 303

Query: 889 DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
           D   V  R++SQ+L  +DGL  R +V VIAATNRPD ID AL R GRFDR + +G P++ 
Sbjct: 304 DAGQVQKRIVSQMLTLMDGLEGRGDVVVIAATNRPDAIDEALRRGGRFDREIEIGVPDKN 363

Query: 949 DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            REEI ++H+R +P S D++I + A L+ G  GAD++ + +E+A++++E
Sbjct: 364 GREEILQVHMRGMPLSDDIDISQFAHLTHGFVGADLAELAKESAMNSLE 412



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/330 (37%), Positives = 185/330 (56%), Gaps = 39/330 (11%)

Query: 331 ISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLYP--PLNAVSKSLR 388
           I + + +G N+   D   +    Q ++ M       V+   T++ + P  P    S    
Sbjct: 128 IRMEIGVGPNQQDQDFPIQIKSTQPSDQM------VVVKESTQIQIKPGDPTTTSSSPED 181

Query: 389 EG-TLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKG 446
            G TLP+ Q E              +GGLS+E A ++++I +        + LG+ P +G
Sbjct: 182 AGDTLPDVQYE-------------DIGGLSEEIAHIREMIEVPMRHPELFNKLGVEPPRG 228

Query: 447 VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 506
           VLLHGPPGTGKT LA+  A++   + ++++GPE++S+ +GESE+ L ++F+ A Q+ PA+
Sbjct: 229 VLLHGPPGTGKTLLAQAVANEVDASYYSISGPEIMSKYHGESEEKLRDIFERAQQNEPAI 288

Query: 507 VFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRP 566
           VF+DE+D+IAP R D   ++ +R+V+ +L LMDG+     V+VIAATNRPD+I+ ALRR 
Sbjct: 289 VFMDEVDSIAPDRTDDAGQVQKRIVSQMLTLMDGLEGRGDVVVIAATNRPDAIDEALRRG 348

Query: 567 GRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHG 626
           GR DREIEI               VP    R EIL   + GM  S  D ++   +  THG
Sbjct: 349 GRFDREIEI--------------GVPDKNGREEILQVHMRGMPLS-DDIDISQFAHLTHG 393

Query: 627 FVGADLAALCNEAALVCLRRY-SKIQTSSD 655
           FVGADLA L  E+A+  L R  S I   +D
Sbjct: 394 FVGADLAELAKESAMNSLERIQSHIDPETD 423



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 133/238 (55%), Gaps = 18/238 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   L++++            L   P+ GVLL+GPPGTGKT LA+  A+++  N
Sbjct: 467 IGGLDHEIQRLQELVEWPIECPQMFEKLSTDPSTGVLLYGPPGTGKTMLAKAVANETSSN 526

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG--GEELSQR 529
             +V GPE+ S+  GES + + E+F  A ++AP+VVF DE+DA+A  R+DG  G  ++  
Sbjct: 527 FISVKGPELQSKWVGESAEQVREIFAKARENAPSVVFFDEVDALAGQRQDGSDGGGVTNS 586

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V+ LL  +DG+   + V+VI ATNRP +I+ AL RPGR D  I++D+            
Sbjct: 587 IVSQLLTELDGLSEVEPVVVIGATNRPKAIDEALLRPGRFDEHIKVDL------------ 634

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
             P    R +I  A+    +    D +   L+  T G  GAD+ ++C EAA+   R Y
Sbjct: 635 --PDKEGREQIFQAITRD-KPVAEDVDFNQLAQETEGISGADIDSICREAAMEVARDY 689


>gi|383861757|ref|XP_003706351.1| PREDICTED: transitional endoplasmic reticulum ATPase TER94-like
            isoform 1 [Megachile rotundata]
          Length = 801

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 125/261 (47%), Positives = 184/261 (70%), Gaps = 1/261 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F+ A  K  PSA+RE I+EVP V W+D+GG + VK +L E V++P +H + F
Sbjct: 442  SLAVTMDNFKYAMTKSSPSALRETIVEVPTVTWDDIGGLQNVKMELQELVQYPVEHPDKF 501

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 502  LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVF 561

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR+ AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 562  DKARSAAPCVLFFDELDSIAKSRGGTVGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 621

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE IFR +LRK P + DV++  +A ++ G +
Sbjct: 622  NRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIFRANLRKSPVAKDVDLSYIAKVTHGFS 681

Query: 981  GADISLICREAAISAIEENLD 1001
            GADI+ IC+ A   AI ++++
Sbjct: 682  GADITEICQRACKLAIRQSIE 702



 Score =  225 bits (574), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 111/243 (45%), Positives = 155/243 (63%), Gaps = 2/243 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P KH   FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 199  VGYDDIGGVRKQLAQIKEMVELPLKHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 258

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K     
Sbjct: 259  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHG-- 316

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DG+ Q  +V V+AATNRP+ IDPAL R GRFD+ + +G P+ T R 
Sbjct: 317  EVERRIVSQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDIGIPDATGRL 376

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EI RIH + +  + DV + E+A  + G  GAD++ +C EAA+  I E +D   +  +H+ 
Sbjct: 377  EILRIHTKNMKLADDVELEEIAAETHGHVGADLASLCSEAALQQIREKMDLIDLEEEHID 436

Query: 1012 TAI 1014
              +
Sbjct: 437  AEV 439



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 158/234 (67%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +K+++ +     S   ++G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 204 IGGVRKQLAQIKEMVELPLKHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 263

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDELDAIAP R+    E+ +R+V
Sbjct: 264 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHGEVERRIV 323

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ ++  V+V+AATNRP+SI+PALRR GR D+EI+I               +
Sbjct: 324 SQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDI--------------GI 369

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEIL      M+ +  D E+E ++  THG VGADLA+LC+EAAL  +R
Sbjct: 370 PDATGRLEILRIHTKNMKLA-DDVELEEIAAETHGHVGADLASLCSEAALQQIR 422



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 20/212 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G++P++GVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + +VFD 
Sbjct: 504 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDK 563

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A  +AP V+F DELD+IA +R     D G   + R++  +L  MDG+     V +I ATN
Sbjct: 564 ARSAAPCVLFFDELDSIAKSRGGTVGDAG-GAADRVINQILTEMDGMGAKKNVFIIGATN 622

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PA+ RPGRLD+ I I               +P    R  I  A L     +  D
Sbjct: 623 RPDIIDPAILRPGRLDQLIYI--------------PLPDEKSREAIFRANLRKSPVA-KD 667

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            ++ Y++  THGF GAD+  +C  A  + +R+
Sbjct: 668 VDLSYIAKVTHGFSGADITEICQRACKLAIRQ 699


>gi|356518956|ref|XP_003528141.1| PREDICTED: cell division cycle protein 48 homolog [Glycine max]
          Length = 814

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 141/309 (45%), Positives = 196/309 (63%), Gaps = 12/309 (3%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V W+D+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 464  FQTALSSSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 523

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 524  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 583

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 584  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDP 643

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E+ R +IF+  LRK P S DV++  LA  + G +GADI+ IC
Sbjct: 644  ALLRPGRLDQLIYIPLPDESSRLQIFKACLRKSPISKDVDLAALARFTHGFSGADITEIC 703

Query: 989  REAAISAIEENLDASRITMQHLK----TAIRHVQPSEIHSYK----ELSAKFQRLVHSNA 1040
            + A   AI E+++   I  +  K     A+      E+   K    E S KF R   S +
Sbjct: 704  QRACKYAIREDIEKD-IEKERRKRENPEAMEEDDTDEVPEIKPAHFEESMKFAR--RSVS 760

Query: 1041 EADESGYQL 1049
            +AD   YQL
Sbjct: 761  DADIRKYQL 769



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 114/268 (42%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 212  EIGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 271

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  N+PSIIF DE+D +A  R K    
Sbjct: 272  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPSIIFIDELDSIAPKREKTHG- 330

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 331  -EVERRIVSQLLTLMDGLKSRSHVVVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 389

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  S +V++ ++   + G  G+D++ +C EAA+  I E +D         
Sbjct: 390  LEVLRIHTKNMKLSDNVDLEKVGRDTHGYVGSDLAALCTEAALQCIREKMDVIDLEDETI 449

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 450  DAEVLNSMAVTNEHFQTALSSSNPSALR 477



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/344 (37%), Positives = 193/344 (56%), Gaps = 34/344 (9%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 218 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 277

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++P+++FIDELD+IAP R+    E+ +R+V
Sbjct: 278 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPSIIFIDELDSIAPKREKTHGEVERRIV 337

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 338 SQLLTLMDGLKSRSHVVVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 383

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
           P    RLE+L      M+ S  + ++E +   THG+VG+DLAALC EAAL C+R    + 
Sbjct: 384 PDEVGRLEVLRIHTKNMKLS-DNVDLEKVGRDTHGYVGSDLAALCTEAALQCIREKMDVI 442

Query: 651 -----QTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSL 705
                   ++VL+S     E   H  T L  S+ S     + R+ +      + D    L
Sbjct: 443 DLEDETIDAEVLNSMAVTNE---HFQTALSSSNPS-----ALRETVVEVPNVSWDDIGGL 494

Query: 706 LSSSLPLRGTVS---EIADNFHN-GVSDSSGGMFMSEKGCALKL 745
            +    L+ TV    E  + F   G+S S G +F    GC   L
Sbjct: 495 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 538



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 120/214 (56%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 515 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 574

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 575 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMTAKKTVFIIG 633

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P  + RL+I  A L     S
Sbjct: 634 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDESSRLQIFKACLRKSPIS 679

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  THGF GAD+  +C  A    +R
Sbjct: 680 -KDVDLAALARFTHGFSGADITEICQRACKYAIR 712


>gi|453083231|gb|EMF11277.1| AAA-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 787

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 194/593 (32%), Positives = 284/593 (47%), Gaps = 92/593 (15%)

Query: 447  VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA--P 504
            VLLHG  G GKT+L    A      +F +    +VS    +    + + F  A   A  P
Sbjct: 273  VLLHGYQGCGKTTLLDAIAESGFRKVFRLKRQVLVSGTLSKGRTEIQDTFQEAVLPANQP 332

Query: 505  AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 564
            +++ ID+LD +A A  D       +   TLL  +    R+  V+++AA     S+   L 
Sbjct: 333  SLIVIDDLDKLASADDD-------KFSDTLLEQIKQ-ARSSRVMIVAACRSLASLPDTLV 384

Query: 565  RPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV-EYLSMA 623
            R     + IEI               +P    R +I   L   ++  L+ S + + ++  
Sbjct: 385  RADGFSKHIEI--------------PIPDVTARQQISDVLCQKLD--LVKSNIPQQIASR 428

Query: 624  THGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNI 683
            THGF G DL  L  +A    L R  +        HS               +DSD     
Sbjct: 429  THGFTGDDLKQLYIQAVECALDRAER--------HSAD-------------RDSDI---- 463

Query: 684  TESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCAL 743
                                      LP   T SE      NG+S+S+     S      
Sbjct: 464  --------------------------LPGLPTYSEA-----NGLSESA--FHPSSTTAVY 490

Query: 744  KLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 803
             ++L DF++A   + P+A+REV  + PKVKW D+GG  +V+      +   Q+H+  F  
Sbjct: 491  DIKLEDFDRALTSIVPTALREVFTDKPKVKWSDIGGSDKVRDSFDHIIGQQQQHKALFAE 550

Query: 804  IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 863
               +P  G+L++GPPGCSKTL A+AVA+    NF+++KG EL SK+VG+SE  VR +F K
Sbjct: 551  FRRKPEKGVLLYGPPGCSKTLTAQAVATSYKFNFISIKGAELISKYVGDSEARVREVFQK 610

Query: 864  ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 923
            A+  AP +IFFDEID +AA R    +G      V++ LL E+DG     +V ++AATN+P
Sbjct: 611  AKTAAPCVIFFDEIDAIAASR---DEGSQSGLNVLTTLLTEMDGFEALKDVFILAATNKP 667

Query: 924  DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 983
            + +DPAL+RPGRFD  +Y+GPPN   R++IFRI    +P +  V    LA L++G +GA+
Sbjct: 668  EALDPALMRPGRFDSHVYLGPPNIAARQDIFRIACDGVPLAESVKFASLAGLTDGYSGAE 727

Query: 984  ISLIC---REAAISAIEENLDASR-ITMQHLKTAIRHVQPSEIHSYKELSAKF 1032
            I  IC   ++  +  I      SR ITM   K AIR V+        +  AKF
Sbjct: 728  IVRICDVAKDLTMRRIGLAEPGSRHITMDEFKAAIREVKKGITKEMLDAYAKF 780



 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 117/216 (54%), Gaps = 20/216 (9%)

Query: 433 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 492
           K+  +    +P KGVLL+GPPG  KT  A+  A     N  ++ G E++S+  G+SE  +
Sbjct: 545 KALFAEFRRKPEKGVLLYGPPGCSKTLTAQAVATSYKFNFISIKGAELISKYVGDSEARV 604

Query: 493 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
            EVF  A  +AP V+F DE+DAIA +R D G +    ++ TLL  MDG      V ++AA
Sbjct: 605 REVFQKAKTAAPCVIFFDEIDAIAASR-DEGSQSGLNVLTTLLTEMDGFEALKDVFILAA 663

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TN+P++++PAL RPGR D  + +                P+ A R +I      G+    
Sbjct: 664 TNKPEALDPALMRPGRFDSHVYL--------------GPPNIAARQDIFRIACDGVP--- 706

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
           L   V++ S+A  T G+ GA++  +C+ A  + +RR
Sbjct: 707 LAESVKFASLAGLTDGYSGAEIVRICDVAKDLTMRR 742


>gi|383861759|ref|XP_003706352.1| PREDICTED: transitional endoplasmic reticulum ATPase TER94-like
            isoform 2 [Megachile rotundata]
          Length = 811

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 125/261 (47%), Positives = 184/261 (70%), Gaps = 1/261 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F+ A  K  PSA+RE I+EVP V W+D+GG + VK +L E V++P +H + F
Sbjct: 441  SLAVTMDNFKYAMTKSSPSALRETIVEVPTVTWDDIGGLQNVKMELQELVQYPVEHPDKF 500

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 501  LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVF 560

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR+ AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 561  DKARSAAPCVLFFDELDSIAKSRGGTVGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 620

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE IFR +LRK P + DV++  +A ++ G +
Sbjct: 621  NRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIFRANLRKSPVAKDVDLSYIAKVTHGFS 680

Query: 981  GADISLICREAAISAIEENLD 1001
            GADI+ IC+ A   AI ++++
Sbjct: 681  GADITEICQRACKLAIRQSIE 701



 Score =  225 bits (574), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 111/243 (45%), Positives = 155/243 (63%), Gaps = 2/243 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P KH   FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 198  VGYDDIGGVRKQLAQIKEMVELPLKHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 257

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K     
Sbjct: 258  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHG-- 315

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DG+ Q  +V V+AATNRP+ IDPAL R GRFD+ + +G P+ T R 
Sbjct: 316  EVERRIVSQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDIGIPDATGRL 375

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EI RIH + +  + DV + E+A  + G  GAD++ +C EAA+  I E +D   +  +H+ 
Sbjct: 376  EILRIHTKNMKLADDVELEEIAAETHGHVGADLASLCSEAALQQIREKMDLIDLEEEHID 435

Query: 1012 TAI 1014
              +
Sbjct: 436  AEV 438



 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 158/234 (67%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +K+++ +     S   ++G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 203 IGGVRKQLAQIKEMVELPLKHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 262

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDELDAIAP R+    E+ +R+V
Sbjct: 263 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHGEVERRIV 322

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ ++  V+V+AATNRP+SI+PALRR GR D+EI+I               +
Sbjct: 323 SQLLTLMDGMKQSSHVIVMAATNRPNSIDPALRRFGRFDKEIDI--------------GI 368

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEIL      M+ +  D E+E ++  THG VGADLA+LC+EAAL  +R
Sbjct: 369 PDATGRLEILRIHTKNMKLA-DDVELEEIAAETHGHVGADLASLCSEAALQQIR 421



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 20/212 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G++P++GVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + +VFD 
Sbjct: 503 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDK 562

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A  +AP V+F DELD+IA +R     D G   + R++  +L  MDG+     V +I ATN
Sbjct: 563 ARSAAPCVLFFDELDSIAKSRGGTVGDAG-GAADRVINQILTEMDGMGAKKNVFIIGATN 621

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PA+ RPGRLD+ I I +              P    R  I  A L     +  D
Sbjct: 622 RPDIIDPAILRPGRLDQLIYIPL--------------PDEKSREAIFRANLRKSPVA-KD 666

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            ++ Y++  THGF GAD+  +C  A  + +R+
Sbjct: 667 VDLSYIAKVTHGFSGADITEICQRACKLAIRQ 698


>gi|297810407|ref|XP_002873087.1| hypothetical protein ARALYDRAFT_908201 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318924|gb|EFH49346.1| hypothetical protein ARALYDRAFT_908201 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 810

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 126/253 (49%), Positives = 174/253 (68%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F  A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 455  FHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 514

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 515  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 574

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 575  CVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 634

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R  IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 635  ALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEIC 694

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 695  QRACKYAIRENIE 707



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 165/267 (61%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 204  VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G 
Sbjct: 264  ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG- 321

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R 
Sbjct: 322  EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRL 381

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD---------- 1001
            E+ RIH + +  + DV++  ++  + G  GAD++ +C EAA+  I E +D          
Sbjct: 382  EVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSID 441

Query: 1002 -----ASRITMQHLKTAIRHVQPSEIH 1023
                 +  ++ +H  TA+ +  PS + 
Sbjct: 442  AEILNSMAVSNEHFHTALGNSNPSALR 468



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 209 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 268

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 328

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 329 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 374

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E +S  THG+VGADLAALC EAAL C+R
Sbjct: 375 PDEIGRLEVLRIHTKNMKLA-EDVDLERISKDTHGYVGADLAALCTEAALQCIR 427



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 118/215 (54%), Gaps = 22/215 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 565

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD-----GGEELSQRMVATLLNLMDGVCRTDGVLVI 550
           FD A QSAP V+F DELD+IA  R +     GG   + R++  LL  MDG+     V +I
Sbjct: 566 FDKARQSAPCVLFFDELDSIATQRGNSVGDAGG--AADRVLNQLLTEMDGMNAKKTVFII 623

Query: 551 AATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEH 610
            ATNRPD I+PAL RPGRLD+ I I +              P    RL I  A L     
Sbjct: 624 GATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEDSRLNIFKACLRKSPV 669

Query: 611 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           +  D +V  L+  T GF GAD+  +C  A    +R
Sbjct: 670 A-KDVDVTALAKYTQGFSGADITEICQRACKYAIR 703


>gi|448727296|ref|ZP_21709662.1| hypothetical protein C448_11486 [Halococcus morrhuae DSM 1307]
 gi|445791510|gb|EMA42150.1| hypothetical protein C448_11486 [Halococcus morrhuae DSM 1307]
          Length = 713

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 137/290 (47%), Positives = 185/290 (63%), Gaps = 15/290 (5%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L +   DFE A   V PSAMRE + E P   ++DVGG  + K  L EAVEWP  +   F+
Sbjct: 425  LAVTRADFETAMAAVDPSAMREYVAESPNAGFDDVGGLDDAKATLTEAVEWPLSYSALFE 484

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
               T PP G+L+ GPPG  KTL+ARA+A E+ +NF++V GPEL  ++VGESEKAVR +FA
Sbjct: 485  ATATDPPAGVLLHGPPGTGKTLLARALAGESDVNFISVAGPELLDRYVGESEKAVREVFA 544

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR  AP+I+FFDEID +A  RG+  +   V++RV+SQLL E+DGL +  N+ V+AATNR
Sbjct: 545  RARQAAPAIVFFDEIDAVAGGRGENHE---VTERVVSQLLTEIDGLAENPNLMVLAATNR 601

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             D IDPALLRPGR +  + V  P+E  R  IF +H    P + DV+I  LA  +EG +GA
Sbjct: 602  MDAIDPALLRPGRIETHIEVPAPDEAARRAIFAVHTDDKPVAEDVDIDRLAADAEGYSGA 661

Query: 983  DISLICREAAISAIEE------------NLDASRITMQHLKTAIRHVQPS 1020
            DI  +CR A+++AI E            + D  RIT +H + A   + P+
Sbjct: 662  DIEALCRAASMAAIREVAGEHSPEDATAHADEVRITAEHFEDAGESITPT 711



 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 111/257 (43%), Positives = 159/257 (61%), Gaps = 5/257 (1%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V +ED+GG  +   Q+ E +E P    E F+ +G  PP+G+L++GPPG  KTL+ARAVA
Sbjct: 194  RVTYEDIGGLDDELDQVREMIELPLSEPELFQELGIEPPSGVLLYGPPGTGKTLIARAVA 253

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
             E    F  + GPE+ SK+ GESE+ +R  F +A  NAPS++F DEID +A+ RG ++D 
Sbjct: 254  GEVDAFFTTISGPEIVSKYKGESEEKLREAFDRAEENAPSVVFIDEIDSIASARGDDAD- 312

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              +  RV++QLL  +DGL  R  V VI ATNR D IDPAL R GRFDR + +G P E  R
Sbjct: 313  --METRVVAQLLTLMDGLESRGQVVVIGATNRVDAIDPALRRGGRFDREIEIGAPGEAGR 370

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL--DASRITMQ 1008
             E+  +H R +P + DV++  LA  + G  GAD+  +  EAA++A+      D+  +T  
Sbjct: 371  REVLDVHTRSMPLAEDVDLDRLAARTHGFVGADLESLAVEAAMAALRHRTERDSLAVTRA 430

Query: 1009 HLKTAIRHVQPSEIHSY 1025
              +TA+  V PS +  Y
Sbjct: 431  DFETAMAAVDPSAMREY 447



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/254 (44%), Positives = 149/254 (58%), Gaps = 21/254 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL  E   ++++I +  S       LG+ P  GVLL+GPPGTGKT +AR  A +    
Sbjct: 200 IGGLDDELDQVREMIELPLSEPELFQELGIEPPSGVLLYGPPGTGKTLIARAVAGEVDAF 259

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE+VS+  GESE+ L E FD A ++AP+VVFIDE+D+IA AR D   ++  R+V
Sbjct: 260 FTTISGPEIVSKYKGESEEKLREAFDRAEENAPSVVFIDEIDSIASARGDDA-DMETRVV 318

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATNR D+I+PALRR GR DREIEI                
Sbjct: 319 AQLLTLMDGLESRGQVVVIGATNRVDAIDPALRRGGRFDREIEI--------------GA 364

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           P  A R E+L      M  +  D +++ L+  THGFVGADL +L  EAA+  LR     +
Sbjct: 365 PGEAGRREVLDVHTRSMPLA-EDVDLDRLAARTHGFVGADLESLAVEAAMAALRH----R 419

Query: 652 TSSDVLHSTGTLFE 665
           T  D L  T   FE
Sbjct: 420 TERDSLAVTRADFE 433



 Score =  159 bits (402), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/267 (37%), Positives = 148/267 (55%), Gaps = 23/267 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL    A L + +    S  +   +    P  GVLLHGPPGTGKT LAR  A +S VN
Sbjct: 459 VGGLDDAKATLTEAVEWPLSYSALFEATATDPPAGVLLHGPPGTGKTLLARALAGESDVN 518

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +V GPE++ +  GESE+A+ EVF  A Q+APA+VF DE+DA+A  R +   E+++R+V
Sbjct: 519 FISVAGPELLDRYVGESEKAVREVFARARQAAPAIVFFDEIDAVAGGRGE-NHEVTERVV 577

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL  +DG+     ++V+AATNR D+I+PAL RPGR++  IE+            PA  
Sbjct: 578 SQLLTEIDGLAENPNLMVLAATNRMDAIDPALLRPGRIETHIEV------------PA-- 623

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQ 651
           P  A R  I  A+ +  +    D +++ L+    G+ GAD+ ALC  A++  +R  +   
Sbjct: 624 PDEAARRAIF-AVHTDDKPVAEDVDIDRLAADAEGYSGADIEALCRAASMAAIREVAGEH 682

Query: 652 TSSDV------LHSTGTLFEFEGHSDT 672
           +  D       +  T   FE  G S T
Sbjct: 683 SPEDATAHADEVRITAEHFEDAGESIT 709


>gi|399216163|emb|CCF72851.1| unnamed protein product [Babesia microti strain RI]
          Length = 892

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 133/300 (44%), Positives = 190/300 (63%), Gaps = 18/300 (6%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F++A     PS++RE  +EVP+  W+D+GG  +VK +L+E V++P +H E FK+ G    
Sbjct: 590  FDRALSLCNPSSLRERSIEVPETTWDDIGGLEDVKRELIETVQYPVEHPEKFKKFGQSAS 649

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+ARA+A E   NF++VKGPEL + W GESE  VR LF KARA AP
Sbjct: 650  KGVLFYGPPGCGKTLLARAIAHECKANFISVKGPELLTMWFGESEANVRELFDKARAAAP 709

Query: 870  SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
             I+FFDE+D +A  RG    G   +DRV++Q+L E+DG+     + +I ATNRPD +DPA
Sbjct: 710  CILFFDEMDSIAKERGTSHGGGEAADRVINQILTEIDGVSSSKPIFIIGATNRPDILDPA 769

Query: 930  LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
            + RPGR D+L+Y+  P+   RE IF+  LR  P + DVNI+++A   EG +GADIS +C+
Sbjct: 770  ITRPGRLDQLIYIPLPDRDSRESIFKACLRNSPLAPDVNIKKMADDLEGYSGADISEVCK 829

Query: 990  EAAISAIEENLDASR--------------ITMQHLKTAI----RHVQPSEIHSYKELSAK 1031
             AA  AI E++ A                IT +H + A+    R ++ S+I  YK+   +
Sbjct: 830  RAAKEAIRESIAADTEGNMSEGESDKVPFITNKHFQAALASSRRSIRESDIQRYKDFKNR 889



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 147/241 (60%), Gaps = 4/241 (1%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            ++ ++D+GG +   +++ E +E P  H E F+ +G  PP GIL+ G PG  KTL+A+A+A
Sbjct: 333  EIGYDDIGGMKRQLSKIRELIELPLHHPEVFQAVGISPPKGILLHGLPGTGKTLIAKAIA 392

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G NF  + GPE+ SK  G+SE  +R +F  A  NAPSIIF DEID +   R K   G
Sbjct: 393  AETGANFYVINGPEIVSKHFGDSESNLRKIFETAEKNAPSIIFIDEIDSIGTKRDKL--G 450

Query: 891  VSVSDRVMSQLLVELDGLHQRV--NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 948
                 R++SQLL  +DGL+ +   NV V+AATNR + +D AL R GRFDR + +   +E 
Sbjct: 451  SEAERRIVSQLLTCMDGLYSKKVSNVLVLAATNRANALDSALRRFGRFDREIEITACDED 510

Query: 949  DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQ 1008
            +R EI  I  R +  S DV++R++A    G  GADIS +C EAA+  I ++   + I   
Sbjct: 511  ERFEILLIKTRDMKLSPDVDLRQIAKACHGYVGADISQLCFEAAMECIRQHFGKTDILFF 570

Query: 1009 H 1009
            H
Sbjct: 571  H 571



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 151/238 (63%), Gaps = 18/238 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ ++ + ++++I +         ++G+ P KG+LLHG PGTGKT +A+  A ++G N
Sbjct: 339 IGGMKRQLSKIRELIELPLHHPEVFQAVGISPPKGILLHGLPGTGKTLIAKAIAAETGAN 398

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            + +NGPE+VS+++G+SE  L ++F++A ++AP+++FIDE+D+I   R   G E  +R+V
Sbjct: 399 FYVINGPEIVSKHFGDSESNLRKIFETAEKNAPSIIFIDEIDSIGTKRDKLGSEAERRIV 458

Query: 532 ATLLNLMDGVC--RTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           + LL  MDG+   +   VLV+AATNR ++++ ALRR GR DREIEI              
Sbjct: 459 SQLLTCMDGLYSKKVSNVLVLAATNRANALDSALRRFGRFDREIEI-------------- 504

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
                 +R EIL      M+ S  D ++  ++ A HG+VGAD++ LC EAA+ C+R++
Sbjct: 505 TACDEDERFEILLIKTRDMKLS-PDVDLRQIAKACHGYVGADISQLCFEAAMECIRQH 561



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 130/253 (51%), Gaps = 33/253 (13%)

Query: 402 VQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 461
           V  T   DI  L  + +E  +++ +             G   +KGVL +GPPG GKT LA
Sbjct: 609 VPETTWDDIGGLEDVKRE--LIETVQYPVEHPEKFKKFGQSASKGVLFYGPPGCGKTLLA 666

Query: 462 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-- 519
           R  AH+   N  +V GPE+++  +GESE  + E+FD A  +AP ++F DE+D+IA  R  
Sbjct: 667 RAIAHECKANFISVKGPELLTMWFGESEANVRELFDKARAAAPCILFFDEMDSIAKERGT 726

Query: 520 KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDM-- 577
             GG E + R++  +L  +DGV  +  + +I ATNRPD ++PA+ RPGRLD+ I I +  
Sbjct: 727 SHGGGEAADRVINQILTEIDGVSSSKPIFIIGATNRPDILDPAITRPGRLDQLIYIPLPD 786

Query: 578 -----SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADL 632
                S   + L+NSP A                       D  ++ ++    G+ GAD+
Sbjct: 787 RDSRESIFKACLRNSPLAP----------------------DVNIKKMADDLEGYSGADI 824

Query: 633 AALCNEAALVCLR 645
           + +C  AA   +R
Sbjct: 825 SEVCKRAAKEAIR 837


>gi|429193185|ref|YP_007178863.1| AAA ATPase [Natronobacterium gregoryi SP2]
 gi|448324534|ref|ZP_21513961.1| Vesicle-fusing ATPase [Natronobacterium gregoryi SP2]
 gi|429137403|gb|AFZ74414.1| AAA+ family ATPase [Natronobacterium gregoryi SP2]
 gi|445618565|gb|ELY72126.1| Vesicle-fusing ATPase [Natronobacterium gregoryi SP2]
          Length = 738

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/249 (51%), Positives = 173/249 (69%), Gaps = 3/249 (1%)

Query: 750 FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
           F++A   V PSAMRE + E P+  + DVGG    K  L E+VEWP  +   F+   T+PP
Sbjct: 460 FDEALASVEPSAMREYVAESPETDFSDVGGLENAKATLRESVEWPLTYDRLFEETNTQPP 519

Query: 810 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
           +G+L++GPPG  KTL+ARA+A E  +NF+ V GPE+  ++VGESEKA+R +F +AR +AP
Sbjct: 520 SGVLLYGPPGTGKTLLARALAGETDVNFVRVDGPEIVDRYVGESEKAIREVFERARQSAP 579

Query: 870 SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 929
           SI+FFDEID + A RG+   G  V++RV+SQLL ELDG+ +  N+ V+AATNR D+IDPA
Sbjct: 580 SIVFFDEIDAITAARGE---GHEVTERVVSQLLTELDGMRENPNLVVLAATNRKDQIDPA 636

Query: 930 LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 989
           LLRPGR D  + VG P+   RE+I  +H R  P   D+N+RELA   EG TGAD+  + R
Sbjct: 637 LLRPGRLDTHVLVGDPDREAREKILEVHTRGKPLGEDINLRELAAELEGYTGADLEALVR 696

Query: 990 EAAISAIEE 998
           +A++ AI E
Sbjct: 697 DASMKAIRE 705



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/279 (44%), Positives = 168/279 (60%), Gaps = 16/279 (5%)

Query: 758  RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 817
            RPS   E  LE   V +ED+GG  E    + E +E P    E F+R+G  PP+G+L++GP
Sbjct: 202  RPSDT-EGELEQGGVTYEDIGGLDEELELVREMIELPLSEPELFQRLGVEPPSGVLLYGP 260

Query: 818  PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 877
            PG  KTL+ARAVA+E   NF  + GPE+ SK+ GESE+ +R +F +A  NAP+IIFFDEI
Sbjct: 261  PGTGKTLIARAVANEVDANFETISGPEIMSKYKGESEERLREVFERAEKNAPTIIFFDEI 320

Query: 878  DGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
            D +A  R  E D     +RV+ QLL  +DGL  R  V VI ATNR D IDPAL R GRFD
Sbjct: 321  DSIAGQRDDEGD---AENRVVGQLLTLMDGLDARGEVIVIGATNRVDTIDPALRRGGRFD 377

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI- 996
            R + +G P+E  R+EI  +H R +P S DV+I  +A  + G  GAD+  +  EAA++AI 
Sbjct: 378  REIQIGVPDEKGRKEILEVHTRGMPLSEDVDIDGIARRTHGFVGADLDAVASEAAMAAIR 437

Query: 997  ----------EENLDASRITMQHLKTAIRHVQPSEIHSY 1025
                      E N D + +  +H   A+  V+PS +  Y
Sbjct: 438  DRPTDTGDREEWNRDPA-VDKRHFDEALASVEPSAMREY 475



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/221 (44%), Positives = 136/221 (61%), Gaps = 17/221 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E  +++++I +  S       LG+ P  GVLL+GPPGTGKT +AR  A++   N
Sbjct: 220 IGGLDEELELVREMIELPLSEPELFQRLGVEPPSGVLLYGPPGTGKTLIARAVANEVDAN 279

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+  GESE+ L EVF+ A ++AP ++F DE+D+IA  R D G +   R+V
Sbjct: 280 FETISGPEIMSKYKGESEERLREVFERAEKNAPTIIFFDEIDSIAGQRDDEG-DAENRVV 338

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
             LL LMDG+     V+VI ATNR D+I+PALRR GR DREI+I               V
Sbjct: 339 GQLLTLMDGLDARGEVIVIGATNRVDTIDPALRRGGRFDREIQI--------------GV 384

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADL 632
           P    R EIL     GM  S  D +++ ++  THGFVGADL
Sbjct: 385 PDEKGRKEILEVHTRGMPLS-EDVDIDGIARRTHGFVGADL 424



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 142/254 (55%), Gaps = 19/254 (7%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 451
           P+A  E+  V  + E D S +GGL    A L++ +    +          +P  GVLL+G
Sbjct: 469 PSAMREY--VAESPETDFSDVGGLENAKATLRESVEWPLTYDRLFEETNTQPPSGVLLYG 526

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LAR  A ++ VN   V+GPE+V +  GESE+A+ EVF+ A QSAP++VF DE
Sbjct: 527 PPGTGKTLLARALAGETDVNFVRVDGPEIVDRYVGESEKAIREVFERARQSAPSIVFFDE 586

Query: 512 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 571
           +DAI  AR + G E+++R+V+ LL  +DG+     ++V+AATNR D I+PAL RPGRLD 
Sbjct: 587 IDAITAARGE-GHEVTERVVSQLLTELDGMRENPNLVVLAATNRKDQIDPALLRPGRLDT 645

Query: 572 EIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGAD 631
            + +                P    R +IL     G      D  +  L+    G+ GAD
Sbjct: 646 HVLV--------------GDPDREAREKILEVHTRGKPLG-EDINLRELAAELEGYTGAD 690

Query: 632 LAALCNEAALVCLR 645
           L AL  +A++  +R
Sbjct: 691 LEALVRDASMKAIR 704


>gi|320101978|ref|YP_004177569.1| AAA ATPase [Isosphaera pallida ATCC 43644]
 gi|319749260|gb|ADV61020.1| AAA family ATPase, CDC48 subfamily [Isosphaera pallida ATCC 43644]
          Length = 845

 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/255 (53%), Positives = 174/255 (68%), Gaps = 1/255 (0%)

Query: 743 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
           LK+ + DF+ A   + PSA+REV +EVP+V W DVGG  EV+ +L+EAVEWP +H + F 
Sbjct: 547 LKIGMEDFQLALRDIEPSAIREVFVEVPEVSWADVGGLAEVRQRLIEAVEWPLRHPDLFA 606

Query: 803 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
               RPP GIL+ GPPGC KTL+A+A+A E+  NF+ VKGP L SK+VG+SEKAVR +F 
Sbjct: 607 SFQARPPRGILLHGPPGCGKTLIAKAIARESQANFIPVKGPALLSKYVGDSEKAVREVFR 666

Query: 863 KARANAPSIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATN 921
           KAR  AP I+FFDEID L   RG+     S V++RV+ Q L ELDG+     V V+AATN
Sbjct: 667 KARQAAPCILFFDEIDALVPTRGEGGGSDSQVAERVVGQFLAELDGIEDLGGVLVLAATN 726

Query: 922 RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
           R D+IDPAL RPGRFD ++ V  PN  DR  I  I LR +P    V++ ELA +SEG TG
Sbjct: 727 RVDRIDPALRRPGRFDLIVEVPAPNRDDRRAILAIGLRDMPLDPAVSLDELAEVSEGLTG 786

Query: 982 ADISLICREAAISAI 996
           AD+  +C EAA   I
Sbjct: 787 ADLRAVCHEAARRVI 801



 Score =  211 bits (538), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/267 (41%), Positives = 165/267 (61%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V++EDVGG +    ++ E +E P +H E F+R+G  PP G+L+ GPPGC KTL+ARAVA+
Sbjct: 303  VRYEDVGGLKRELNRIRELIELPLRHPEVFQRLGIDPPQGVLLHGPPGCGKTLIARAVAA 362

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+   F AV GPE+  K+ GESE  +R +F +A  +APSIIF DEID +A  R  E+   
Sbjct: 363  ESDAAFFAVNGPEIVHKFYGESEAHLRRIFDEAARSAPSIIFLDEIDAIAPKR--ENAVG 420

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R+++QLL  +DG+++R  V V+AATN P+ +DPAL RPGRFDR + +  P+   R 
Sbjct: 421  EVEKRIVAQLLALMDGMNRRGRVLVLAATNLPNNLDPALRRPGRFDREIALPIPDREGRR 480

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEE------------- 998
            +I  +H R +P   DV++ +LA ++ G  GAD+  +CREAA+  +               
Sbjct: 481  DILDVHTRGMPLDDDVDLDQLAAITHGFVGADLEALCREAAMVRLRRLMPAIDFDSGALP 540

Query: 999  --NLDASRITMQHLKTAIRHVQPSEIH 1023
               L   +I M+  + A+R ++PS I 
Sbjct: 541  YNQLKTLKIGMEDFQLALRDIEPSAIR 567



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 147/235 (62%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P +GVLLHGPPG GKT +AR  A +S   
Sbjct: 308 VGGLKRELNRIRELIELPLRHPEVFQRLGIDPPQGVLLHGPPGCGKTLIARAVAAESDAA 367

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F VNGPE+V + YGESE  L  +FD A++SAP+++F+DE+DAIAP R++   E+ +R+V
Sbjct: 368 FFAVNGPEIVHKFYGESEAHLRRIFDEAARSAPSIIFLDEIDAIAPKRENAVGEVEKRIV 427

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+ R   VLV+AATN P++++PALRRPGR DREI +               +
Sbjct: 428 AQLLALMDGMNRRGRVLVLAATNLPNNLDPALRRPGRFDREIAL--------------PI 473

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R +IL     GM         +  ++ THGFVGADL ALC EAA+V LRR
Sbjct: 474 PDREGRRDILDVHTRGMPLDDDVDLDQLAAI-THGFVGADLEALCREAAMVRLRR 527



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/258 (37%), Positives = 146/258 (56%), Gaps = 28/258 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            +S   RP +G+LLHGPPG GKT +A+  A +S  N   V GP ++S+  G+SE+A+ EV
Sbjct: 605 FASFQARPPRGILLHGPPGCGKTLIAKAIARESQANFIPVKGPALLSKYVGDSEKAVREV 664

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGG---EELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A Q+AP ++F DE+DA+ P R +GG    ++++R+V   L  +DG+    GVLV+AA
Sbjct: 665 FRKARQAAPCILFFDEIDALVPTRGEGGGSDSQVAERVVGQFLAELDGIEDLGGVLVLAA 724

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS-GMEHS 611
           TNR D I+PALRRPGR D  +E+                  PA   +   A+L+ G+   
Sbjct: 725 TNRVDRIDPALRRPGRFDLIVEV------------------PAPNRDDRRAILAIGLRDM 766

Query: 612 LLDSEV--EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGH 669
            LD  V  + L+  + G  GADL A+C+EAA   +RR    Q  +  + +T TL +    
Sbjct: 767 PLDPAVSLDELAEVSEGLTGADLRAVCHEAARRVIRRIVA-QREAGSVATTTTLPKV--- 822

Query: 670 SDTMLQDSDCSRNITESS 687
           + T L D+  +R +  +S
Sbjct: 823 ARTDLLDAIAARKLDHAS 840


>gi|193617621|ref|XP_001949588.1| PREDICTED: transitional endoplasmic reticulum ATPase TER94-like
            [Acyrthosiphon pisum]
          Length = 804

 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 124/262 (47%), Positives = 183/262 (69%), Gaps = 1/262 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F  A  K  PSA+RE I+EVP + WED+GG   VK +L E V++P +H + F
Sbjct: 442  SLAVTMENFRYAMSKSSPSALRETIVEVPNITWEDIGGLANVKRELQELVQYPVEHPDKF 501

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 502  LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIF 561

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KARA AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 562  DKARAAAPCVLFFDELDSIAKSRGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 621

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE IF+ +LRK P + DV++  +A ++ G +
Sbjct: 622  NRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIFKANLRKSPVAKDVDLDYIAKVTHGYS 681

Query: 981  GADISLICREAAISAIEENLDA 1002
            GAD++ +C+ A   AI ++++A
Sbjct: 682  GADLTEVCQRACKLAIRQSIEA 703



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 106/230 (46%), Positives = 149/230 (64%), Gaps = 2/230 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P +H   FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 199  VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 258

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K     
Sbjct: 259  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADRNSPAIIFIDELDAIAPKREKTHG-- 316

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DGL    +V V+AATNRP+ ID AL R GRFDR + +G P+ T R 
Sbjct: 317  EVERRIVSQLLTLMDGLKSSSHVIVMAATNRPNSIDSALRRFGRFDREIDIGIPDATGRL 376

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
            E+ RIH + +  + +V++ ++A  + G  GAD++ +C EAA+  I E +D
Sbjct: 377  EVLRIHTKNMKLAEEVDLEQIAAETHGHVGADLASLCSEAALQQIREKMD 426



 Score =  196 bits (499), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/260 (41%), Positives = 164/260 (63%), Gaps = 22/260 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A +K+++ +     S   ++G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 204 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 263

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDELDAIAP R+    E+ +R+V
Sbjct: 264 FFLINGPEIMSKLAGESESNLRKAFEEADRNSPAIIFIDELDAIAPKREKTHGEVERRIV 323

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+  +  V+V+AATNRP+SI+ ALRR GR DREI+I               +
Sbjct: 324 SQLLTLMDGLKSSSHVIVMAATNRPNSIDSALRRFGRFDREIDI--------------GI 369

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI- 650
           P    RLE+L      M+ +  + ++E ++  THG VGADLA+LC+EAAL  +R    + 
Sbjct: 370 PDATGRLEVLRIHTKNMKLA-EEVDLEQIAAETHGHVGADLASLCSEAALQQIREKMDLI 428

Query: 651 -----QTSSDVLHSTGTLFE 665
                Q  ++VL+S     E
Sbjct: 429 DLEDDQIDAEVLNSLAVTME 448



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 132/243 (54%), Gaps = 22/243 (9%)

Query: 408 QDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHD 467
           +DI  L  + +E   L    +    K      G++P++GVL +GPPG GKT LA+  A++
Sbjct: 475 EDIGGLANVKRELQELVQYPVEHPDK--FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 532

Query: 468 SGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR----KDGG 523
              N  +V GPE+++  +GESE  + ++FD A  +AP V+F DELD+IA +R     D G
Sbjct: 533 CQANFISVKGPELLTMWFGESEANVRDIFDKARAAAPCVLFFDELDSIAKSRGGNVGDAG 592

Query: 524 EELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSL 583
              + R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRLD+ I I +      
Sbjct: 593 -GAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL------ 645

Query: 584 LKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVC 643
                   P    R  I  A L     +  D +++Y++  THG+ GADL  +C  A  + 
Sbjct: 646 --------PDEKSREAIFKANLRKSPVA-KDVDLDYIAKVTHGYSGADLTEVCQRACKLA 696

Query: 644 LRR 646
           +R+
Sbjct: 697 IRQ 699


>gi|357114006|ref|XP_003558792.1| PREDICTED: cell division control protein 48 homolog E-like
            [Brachypodium distachyon]
          Length = 811

 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/324 (44%), Positives = 202/324 (62%), Gaps = 17/324 (5%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 460  FKTALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 519

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 520  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARGSAP 579

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 580  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 639

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+   R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 640  ALLRPGRLDQLIYIPLPDVESRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEIC 699

Query: 989  REAAISAIEENLDASRITMQHLKT----AIRHVQPSEIHSYK----ELSAKFQRLVHSNA 1040
            + A   AI EN++   I M+  +     A+      EI   +    E S K+ R   S +
Sbjct: 700  QRACKYAIRENIEKD-IEMERRRKDNPEAMEEDVVDEIAEIRAAHFEESMKYAR--RSVS 756

Query: 1041 EADESGYQ-----LRPSKSIGSNM 1059
            +AD   YQ     L+ S+  GS  
Sbjct: 757  DADIRKYQAFAQTLQQSRGFGSEF 780



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/268 (44%), Positives = 164/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 208  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 267

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAP+IIF DEID +A  R K ++G
Sbjct: 268  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKREK-TNG 326

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 327  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 385

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV +  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 386  LEVLRIHTKNMKLAEDVELEHISKDTHGFVGADLAALCTEAALQCIREKMDIIDLEDETI 445

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H KTA+    PS + 
Sbjct: 446  DAEILNSMAVTNDHFKTALTTSNPSALR 473



 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 108/239 (45%), Positives = 157/239 (65%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 214 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 273

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++APA++FIDE+D+IAP R+    E+ +R+V
Sbjct: 274 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKREKTNGEVERRIV 333

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 334 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 379

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  D E+E++S  THGFVGADLAALC EAAL C+R    I
Sbjct: 380 PDEVGRLEVLRIHTKNMKLA-EDVELEHISKDTHGFVGADLAALCTEAALQCIREKMDI 437



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 511 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 570

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A  SAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 571 FDKARGSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 629

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    RL+I  A L     +
Sbjct: 630 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDVESRLQIFKACLRKSPVA 675

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 676 -KDVDLNALAKYTQGFSGADITEICQRACKYAIR 708


>gi|169784111|ref|XP_001826517.1| AAA family ATPase [Aspergillus oryzae RIB40]
 gi|238508844|ref|XP_002385604.1| AAA family ATPase, putative [Aspergillus flavus NRRL3357]
 gi|83775262|dbj|BAE65384.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|220688496|gb|EED44849.1| AAA family ATPase, putative [Aspergillus flavus NRRL3357]
 gi|391868519|gb|EIT77733.1| AAA+-type ATPase [Aspergillus oryzae 3.042]
          Length = 753

 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/300 (46%), Positives = 196/300 (65%), Gaps = 10/300 (3%)

Query: 722  NFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQR 781
             F +G SD       +++   L+++  D   A  + RP+AMREV LE PKV+W D+GGQ 
Sbjct: 441  KFTSGSSDD----LATKETVPLEVQEADVLTALQETRPTAMREVFLETPKVRWSDIGGQH 496

Query: 782  EVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVK 841
            ++K +L +AVE P KH E  +R+      GIL++GPPGCSKTL  +A+A+EAGLNF+AVK
Sbjct: 497  DIKRRLQKAVERPLKHPERMRRLNVNSKKGILLYGPPGCSKTLTVKALATEAGLNFMAVK 556

Query: 842  GPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQL 901
            G E+ S +VGESE+A+R +F KAR+  PSIIFFDEID +A+ R   S G      V++ L
Sbjct: 557  GAEILSMYVGESERALRDIFRKARSAKPSIIFFDEIDAIASKRSSTSQG---GVNVLTTL 613

Query: 902  LVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKI 961
            L E+DG+ +  +V V+AATN+P+ IDPAL+RPGR D +LY+GPP+   R+EI  I  RK 
Sbjct: 614  LNEMDGIEELKSVLVVAATNKPEVIDPALMRPGRLDNILYIGPPDFEARKEILNIWCRKS 673

Query: 962  PCSSDVNIRELACLSEGCTGADISLICREAAISAI---EENLDASRITMQHLKTAIRHVQ 1018
                 V++ ELA  +EG +GA+I  IC  A  +A+   EE   A  I  +H + A++ V+
Sbjct: 674  IVHPGVSLEELAWKTEGYSGAEIVSICETAGDAALDEEEETGQAQDIRWEHFELALKQVK 733



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 20/223 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L +   KG+LL+GPPG  KT   +  A ++G+N   V G E++S   GESE+AL ++
Sbjct: 516 MRRLNVNSKKGILLYGPPGCSKTLTVKALATEAGLNFMAVKGAEILSMYVGESERALRDI 575

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A  + P+++F DE+DAIA  R    +     ++ TLLN MDG+     VLV+AATN+
Sbjct: 576 FRKARSAKPSIIFFDEIDAIASKRSSTSQG-GVNVLTTLLNEMDGIEELKSVLVVAATNK 634

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P+ I+PAL RPGRLD           ++L   P   P    R EIL+        S++  
Sbjct: 635 PEVIDPALMRPGRLD-----------NILYIGP---PDFEARKEILNIWC---RKSIVHP 677

Query: 616 EV--EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDV 656
            V  E L+  T G+ GA++ ++C  A    L    +   + D+
Sbjct: 678 GVSLEELAWKTEGYSGAEIVSICETAGDAALDEEEETGQAQDI 720



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 129/256 (50%), Gaps = 28/256 (10%)

Query: 411 SKLGGLSKEYAILKDIIISSSVKSTLSSLG--LRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           S LGG+ ++   + + +   ++ S + ++      T+GVLL+GP GTGKT+L R      
Sbjct: 206 SGLGGMGRQIESINESLADFNIGSEIVAMPSFYEHTRGVLLYGPKGTGKTALLRQIQAAG 265

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
               F + G     +N GESE  L  +F  A +  P+VV ID++D IAP R       SQ
Sbjct: 266 WRKAFNI-GSSTFGRNIGESEAKLRNLFQDAIRCQPSVVVIDQVDFIAPKRTSLD---SQ 321

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            + + L   +D + R   VLV+AAT  P+ ++ ALR P RL  EIE+             
Sbjct: 322 SLTSVLCECLD-LVRGAMVLVVAATRHPNEVDDALRTPHRLATEIELH------------ 368

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL---- 644
             VP+   R EIL A+       L DS ++ ++  THG+VGADL AL     LVC     
Sbjct: 369 --VPTAYDRAEILRAICGYQSPVLSDSLIDMMAEKTHGYVGADLFALLQ---LVCRKARQ 423

Query: 645 RRYSKIQTSSDVLHST 660
           R+  K  ++S  LH T
Sbjct: 424 RQIEKADSNSWALHQT 439



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           G+L++GP G  KT + R + + AG       G   F + +GESE  +R+LF  A    PS
Sbjct: 243 GVLLYGPKGTGKTALLRQIQA-AGWRKAFNIGSSTFGRNIGESEAKLRNLFQDAIRCQPS 301

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
           ++  D++D +A  R       S+  + ++ +L E   L +   V V+AAT  P+++D AL
Sbjct: 302 VVVIDQVDFIAPKR------TSLDSQSLTSVLCECLDLVRGAMVLVVAATRHPNEVDDAL 355

Query: 931 LRPGRFDRLLYVGPPNETDREEIFR-IHLRKIPCSSDVNIRELACLSEGCTGAD----IS 985
             P R    + +  P   DR EI R I   + P  SD  I  +A  + G  GAD    + 
Sbjct: 356 RTPHRLATEIELHVPTAYDRAEILRAICGYQSPVLSDSLIDMMAEKTHGYVGADLFALLQ 415

Query: 986 LICREAAISAIEE 998
           L+CR+A    IE+
Sbjct: 416 LVCRKARQRQIEK 428


>gi|385302919|gb|EIF47024.1| protein afg2 [Dekkera bruxellensis AWRI1499]
          Length = 572

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/317 (43%), Positives = 207/317 (65%), Gaps = 11/317 (3%)

Query: 746  ELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIG 805
            EL+D   A  ++RPSAMRE++LE+PKV+W D+GGQ  +K +L E V+ P    + FKR+G
Sbjct: 148  ELLD---ALKEIRPSAMREIVLEMPKVRWSDIGGQEVLKRKLKEMVQLPLTAADTFKRLG 204

Query: 806  TRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR 865
               P G+L++GPPGCSKT+ A+A+A+E+GLNF+A+KGPE+F+K+VGESEK +R +F KAR
Sbjct: 205  ISAPKGLLLYGPPGCSKTMTAKALATESGLNFIAIKGPEIFNKYVGESEKKIREIFRKAR 264

Query: 866  ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDK 925
              APSIIF DEID LA  R + +D   V+ +V++ LL E+DG+ +   V ++ ATNRPB 
Sbjct: 265  LAAPSIIFIDEIDALATSR-ESADSGHVTKQVLNTLLNEIDGVEELRGVIIVGATNRPBA 323

Query: 926  IDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCTGADI 984
            IDPALLRPGR DR +YV PP+   R +IF  +  K      D  + +L  +++G +G++ 
Sbjct: 324  IDPALLRPGRLDRHVYVSPPDSDARXQIFXKNTSKFNLEDKDALLTKLVGMTDGFSGSEC 383

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSA--KFQRLVHS 1038
             L+C+EA ++AI  + +  ++   +   AI    +++ P  I  YKE +   K+Q+    
Sbjct: 384  VLLCQEAGLNAIMSDSNCRKVGESNFLAAINDISKNITPEMIQYYKEFARNHKWQKSELV 443

Query: 1039 NAEADESGYQLRPSKSI 1055
             +    SG   +  KSI
Sbjct: 444  ESRQQTSGLTFKWYKSI 460



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 150/277 (54%), Gaps = 32/277 (11%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
           S +GG       LK+++ +  +   T   LG+   KG+LL+GPPG  KT  A+  A +SG
Sbjct: 174 SDIGGQEVLKRKLKEMVQLPLTAADTFKRLGISAPKGLLLYGPPGCSKTMTAKALATESG 233

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK--DGGEELS 527
           +N   + GPE+ ++  GESE+ + E+F  A  +AP+++FIDE+DA+A +R+  D G  ++
Sbjct: 234 LNFIAIKGPEIFNKYVGESEKKIREIFRKARLAAPSIIFIDEIDALATSRESADSG-HVT 292

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           ++++ TLLN +DGV    GV+++ ATNRPB+I+PAL RPGRLDR + +           S
Sbjct: 293 KQVLNTLLNEIDGVEELRGVIIVGATNRPBAIDPALLRPGRLDRHVYV-----------S 341

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
           P   P    R +I     S       D+ +  L   T GF G++   LC EA L      
Sbjct: 342 P---PDSDARXQIFXKNTSKFNLEDKDALLTKLVGMTDGFSGSECVLLCQEAGL------ 392

Query: 648 SKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNIT 684
           + I + S+            G S+ +   +D S+NIT
Sbjct: 393 NAIMSDSNCRKV--------GESNFLAAINDISKNIT 421



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 51/161 (31%)

Query: 487 ESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG 546
           E  +   + F  A + +PA++ IDE+D++ P +K                          
Sbjct: 12  EQRRHFEDSFKEAVKYSPAIILIDEIDSLVPKQK-------------------------- 45

Query: 547 VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLS 606
                    P SI+ +LRRPGR D+E+EI               +P    R +IL   +S
Sbjct: 46  ---------PGSIDSSLRRPGRFDQELEI--------------PIPDADGRYDILIKQIS 82

Query: 607 GME--HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            M+   +L D E+  ++  THG+VGADL +L  EA ++C++
Sbjct: 83  RMQGRSTLTDDEIRXVANKTHGYVGADLVSLTREAVMMCIK 123



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 71/188 (37%), Gaps = 53/188 (28%)

Query: 852  ESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQR 911
            E  +     F +A   +P+II  DEID L                               
Sbjct: 12   EQRRHFEDSFKEAVKYSPAIILIDEIDSLVP----------------------------- 42

Query: 912  VNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS---DVN 968
                      +P  ID +L RPGRFD+ L +  P+   R +I    + ++   S   D  
Sbjct: 43   --------KQKPGSIDSSLRRPGRFDQELEIPIPDADGRYDILIKQISRMQGRSTLTDDE 94

Query: 969  IRELACLSEGCTGADISLICREAAISAIEENL-------------DASRITMQHLKTAIR 1015
            IR +A  + G  GAD+  + REA +  I+ NL              + ++    L  A++
Sbjct: 95   IRXVANKTHGYVGADLVSLTREAVMMCIKGNLXQFNGADLSEDAFKSVKLGYDELLDALK 154

Query: 1016 HVQPSEIH 1023
             ++PS + 
Sbjct: 155  EIRPSAMR 162


>gi|326527541|dbj|BAK08045.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 813

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 124/253 (49%), Positives = 176/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 460  FKTALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 519

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF+++KGPEL + W GESE  VR +F KAR +AP
Sbjct: 520  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAP 579

Query: 870  SIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG  S D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 580  CVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 639

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+   R +IF+  LRK P + D+++  LA  ++G +GADI+ IC
Sbjct: 640  ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEIC 699

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 700  QRACKYAIRENIE 712



 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 120/267 (44%), Positives = 163/267 (61%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL+FGPPG  KTL+ARAVA+
Sbjct: 209  VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLFGPPGSGKTLIARAVAN 268

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G 
Sbjct: 269  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG- 326

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R 
Sbjct: 327  EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 386

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD---------- 1001
            E+ RIH + +  + DV +  ++  + G  GAD++ +C EAA+  I E +D          
Sbjct: 387  EVLRIHTKNMKLAEDVELEHISRDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETID 446

Query: 1002 -----ASRITMQHLKTAIRHVQPSEIH 1023
                 +  +T  H KTA+    PS + 
Sbjct: 447  AEILNSMAVTNDHFKTALTTSNPSALR 473



 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 106/239 (44%), Positives = 156/239 (65%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL GPPG+GKT +AR  A+++G  
Sbjct: 214 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLFGPPGSGKTLIARAVANETGAF 273

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 274 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 333

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 334 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 379

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  D E+E++S  THG+VGADLAALC EAAL C+R    I
Sbjct: 380 PDEVGRLEVLRIHTKNMKLA-EDVELEHISRDTHGYVGADLAALCTEAALQCIREKMDI 437



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 116/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  ++ GPE+++  +GESE  + E+
Sbjct: 511 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 570

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A  SAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 571 FDKARGSAPCVLFFDELDSIATQRGSSSGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 629

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I               +P    R +I  A L     +
Sbjct: 630 ATNRPDIIDPALLRPGRLDQLIYI--------------PLPDVDSRHQIFKACLRKSPLA 675

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 676 -KDIDLSALAKYTQGFSGADITEICQRACKYAIR 708


>gi|357509251|ref|XP_003624914.1| Cell division control protein-like protein [Medicago truncatula]
 gi|355499929|gb|AES81132.1| Cell division control protein-like protein [Medicago truncatula]
          Length = 586

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/351 (43%), Positives = 214/351 (60%), Gaps = 18/351 (5%)

Query: 680  SRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEK 739
            +R I   S+D    A+ C   +   L    L    +  E +DN +  V+DSS        
Sbjct: 233  TRKIPRDSQDLEYVAASCNGYVGADLRDLCLEAVKSAIERSDNANKDVNDSS-------- 284

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
                 L + D++ AR  V+PS  R + +E+PKV W+D+GG ++VKT+L +A+EWP KH +
Sbjct: 285  -----LTMEDWKNARSLVQPSITRGITVEIPKVTWKDIGGLKDVKTKLEQAIEWPMKHPD 339

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
            AF R+G  P  GIL+ GPPGCSKT +A+A A+ A + F ++   ELFS +VG+ E  +R 
Sbjct: 340  AFSRLGITPIRGILLHGPPGCSKTTLAKAAANAANVPFFSLSCAELFSMYVGDGEGLLRE 399

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKESD-GVSVSDRVMSQLLVELDGLHQRVNVTVIA 918
            +F KAR    SIIFFDE D +A  RG  S  G  V +R++S LL E+DGL +   V V+A
Sbjct: 400  IFQKARLAGKSIIFFDEADIVAGKRGDSSSGGAVVGERLLSTLLTEMDGLEEAKGVLVLA 459

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEG 978
            ATNRP  ID AL+RPGRFD +LYV PP+   R EI ++H R +   SDV++R+LA  +E 
Sbjct: 460  ATNRPYAIDAALMRPGRFDLILYVPPPDLEGRFEILKVHTRGMNLGSDVDLRKLAEDTEL 519

Query: 979  CTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSY 1025
             TGA++  +C+E  I A+ EN+DAS +   H KTA   ++P+    EI SY
Sbjct: 520  FTGAELQGLCKEVGIVALRENIDASVVYDHHFKTAKNSLKPALTAEEIVSY 570



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 118/215 (54%), Gaps = 22/215 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S LG+ P +G+LLHGPPG  KT+LA+  A+ + V  F+++  E+ S   G+ E  L E+
Sbjct: 341 FSRLGITPIRGILLHGPPGCSKTTLAKAAANAANVPFFSLSCAELFSMYVGDGEGLLREI 400

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD---GGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A  +  +++F DE D +A  R D   GG  + +R+++TLL  MDG+    GVLV+AA
Sbjct: 401 FQKARLAGKSIIFFDEADIVAGKRGDSSSGGAVVGERLLSTLLTEMDGLEEAKGVLVLAA 460

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRP +I+ AL RPGR D            L+   P   P    R EIL     GM    
Sbjct: 461 TNRPYAIDAALMRPGRFD------------LILYVPP--PDLEGRFEILKVHTRGMN--- 503

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           L S+V+   +A  T  F GA+L  LC E  +V LR
Sbjct: 504 LGSDVDLRKLAEDTELFTGAELQGLCKEVGIVALR 538



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/247 (38%), Positives = 137/247 (55%), Gaps = 28/247 (11%)

Query: 445 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 504
           +G+LL+GPPGTGKTSL R    + G NL  ++   V S   GESE+ L E F  AS  A 
Sbjct: 81  RGLLLYGPPGTGKTSLVRAIVEECGANLTIISPNTVNSALAGESERNLREAFSEASSHAA 140

Query: 505 ----AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTD---GVLVIAATNRPD 557
               +V+FIDE+D + P R+D   EL  R+ + L  LMD    T    GV+V+A+TNR D
Sbjct: 141 LGKSSVIFIDEIDGLCP-RRDSIRELDVRIASQLCTLMDSNKATSSNPGVVVVASTNRVD 199

Query: 558 SIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEV 617
           +I+PALRR GR D E E+               VP+  +RL+IL      +     D  +
Sbjct: 200 AIDPALRRYGRFDIETEV--------------TVPNEEERLQILELYTRKIPRDSQD--L 243

Query: 618 EYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDS 677
           EY++ + +G+VGADL  LC EA    + R      + DV  S+ T+ +++ ++ +++Q S
Sbjct: 244 EYVAASCNGYVGADLRDLCLEAVKSAIERSD--NANKDVNDSSLTMEDWK-NARSLVQPS 300

Query: 678 DCSRNIT 684
             +R IT
Sbjct: 301 -ITRGIT 306



 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 123/226 (54%), Gaps = 19/226 (8%)

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P G+L++GPPG  KT + RA+  E G N   +    + S   GESE+ +R  F++A ++A
Sbjct: 80   PRGLLLYGPPGTGKTSLVRAIVEECGANLTIISPNTVNSALAGESERNLREAFSEASSHA 139

Query: 869  P----SIIFFDEIDGLAAIRGKESDGVSVSD-RVMSQLLVELD---GLHQRVNVTVIAAT 920
                 S+IF DEIDGL   R    D +   D R+ SQL   +D          V V+A+T
Sbjct: 140  ALGKSSVIFIDEIDGLCPRR----DSIRELDVRIASQLCTLMDSNKATSSNPGVVVVAST 195

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NR D IDPAL R GRFD    V  PNE +R +I  ++ RKIP  S  ++  +A    G  
Sbjct: 196  NRVDAIDPALRRYGRFDIETEVTVPNEEERLQILELYTRKIPRDSQ-DLEYVAASCNGYV 254

Query: 981  GADISLICREAAISAIE------ENLDASRITMQHLKTAIRHVQPS 1020
            GAD+  +C EA  SAIE      ++++ S +TM+  K A   VQPS
Sbjct: 255  GADLRDLCLEAVKSAIERSDNANKDVNDSSLTMEDWKNARSLVQPS 300


>gi|302770437|ref|XP_002968637.1| hypothetical protein SELMODRAFT_145748 [Selaginella moellendorffii]
 gi|300163142|gb|EFJ29753.1| hypothetical protein SELMODRAFT_145748 [Selaginella moellendorffii]
          Length = 809

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 198/323 (61%), Gaps = 15/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 462  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 521

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 522  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDKARQSAP 581

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 582  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 641

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++  L   ++G +GADI+ IC
Sbjct: 642  ALLRPGRLDQLIYIPLPDEASRLKIFQAALRKSPLSKDVDLEALGRYTQGFSGADITEIC 701

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKEL-------SAKFQRLVHSNAE 1041
            + A   AI EN++      +        +   E+    E+       + KF R   S ++
Sbjct: 702  QRACKYAIRENIEQDIEKERRRADNPEAMDEDEVDEIAEIRPAHFEEAMKFAR--RSVSD 759

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+  GS  
Sbjct: 760  ADIRKYQAFAQTLQQSRGFGSEF 782



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 117/268 (43%), Positives = 164/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 210  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 269

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 270  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQG- 328

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 329  -EVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 387

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++ +++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 388  LEVLRIHTKNMKLAEDVDLEKISHNTHGFVGADLAALCTEAALQCIREKMDVIDLEDETI 447

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 448  DAEVLSSMAVTNEHFQTALGTSNPSALR 475



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 216 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 275

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 276 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVERRIV 335

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 336 SQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 381

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E +S  THGFVGADLAALC EAAL C+R
Sbjct: 382 PDEVGRLEVLRIHTKNMKLA-EDVDLEKISHNTHGFVGADLAALCTEAALQCIR 434



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 119/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + +V
Sbjct: 513 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDV 572

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 573 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 631

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P  A RL+I  A L     S
Sbjct: 632 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEASRLKIFQAALRKSPLS 677

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++E L   T GF GAD+  +C  A    +R
Sbjct: 678 -KDVDLEALGRYTQGFSGADITEICQRACKYAIR 710


>gi|393722932|ref|ZP_10342859.1| AAA ATPase [Sphingomonas sp. PAMC 26605]
          Length = 760

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 133/290 (45%), Positives = 189/290 (65%), Gaps = 4/290 (1%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V+PSAMREV++E P+V+W+DVGG  + + +L E VE P K   AF+R+G RP
Sbjct: 450  DFVDALKRVQPSAMREVMVEAPRVRWDDVGGLDDAQMRLKEGVELPLKDPYAFRRLGIRP 509

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G L++GPPG  KTL+A+AVA EA  NF+A K  +L SKW GESE+ +  LFA+AR  A
Sbjct: 510  AKGFLLYGPPGTGKTLLAKAVAREAQANFIATKSSDLLSKWYGESEQQIAKLFARARQVA 569

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P +IF DE+D L   RG       V++RV++ +L E+DGL +  +V VI ATNRP+ IDP
Sbjct: 570  PCVIFIDELDSLVPTRGSGMGEPQVTERVVNTILAEMDGLEELQSVVVIGATNRPNLIDP 629

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+YVG P+   R  I  I   K+P + DV++  LA  ++  TGAD+  + 
Sbjct: 630  ALLRPGRFDELIYVGVPSRDGRARILAIQTAKMPIAEDVDLDVLAGRTDRFTGADLEDLV 689

Query: 989  REAAISAIEENLDASRITMQHLKTAIRH----VQPSEIHSYKELSAKFQR 1034
            R A ++A+ E+L  +++TM H +TA+      V P     Y+ + A+ ++
Sbjct: 690  RRAGLTALRESLQVTQVTMAHFETALADSRASVTPELEREYETMKARLKQ 739



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 157/267 (58%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG      QL E VE P ++ E F+R+G  PP G+L+ GPPG  KT +ARAVA+
Sbjct: 200  VTYDDIGGMGPTIDQLREMVELPLRYPELFQRLGVDPPKGVLLHGPPGTGKTRLARAVAN 259

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+   F  + GPE+     GESE  +R +F +A   APSI+F DEID +A  RG+ S   
Sbjct: 260  ESAAEFFLINGPEIMGSAYGESESKLRQVFEEAAKAAPSIVFIDEIDSIAPKRGQVSG-- 317

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                R+++QLL  +DGL  R NV VIAATNRP+ ID AL RPGRFDR + VG P+E  R 
Sbjct: 318  EAEKRLVAQLLTLMDGLEARANVVVIAATNRPEAIDEALRRPGRFDREIVVGVPDERGRR 377

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI  IH R +P    V++ ELA  + G  GAD++ + REAAI A+               
Sbjct: 378  EILGIHTRGMPLGDRVDLDELARTTYGFVGADLAALAREAAIEAVRKLMPRLNLSEGTIP 437

Query: 998  -ENLDASRITMQHLKTAIRHVQPSEIH 1023
             E LD   +T +    A++ VQPS + 
Sbjct: 438  PEILDTLAVTREDFVDALKRVQPSAMR 464



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/253 (43%), Positives = 153/253 (60%), Gaps = 20/253 (7%)

Query: 398 EFQNVQATVEQDIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPG 454
           E++  +     D++   +GG+      L++++ +          LG+ P KGVLLHGPPG
Sbjct: 188 EYEEPKEARRADVTYDDIGGMGPTIDQLREMVELPLRYPELFQRLGVDPPKGVLLHGPPG 247

Query: 455 TGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDA 514
           TGKT LAR  A++S    F +NGPE++   YGESE  L +VF+ A+++AP++VFIDE+D+
Sbjct: 248 TGKTRLARAVANESAAEFFLINGPEIMGSAYGESESKLRQVFEEAAKAAPSIVFIDEIDS 307

Query: 515 IAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIE 574
           IAP R     E  +R+VA LL LMDG+     V+VIAATNRP++I+ ALRRPGR DREI 
Sbjct: 308 IAPKRGQVSGEAEKRLVAQLLTLMDGLEARANVVVIAATNRPEAIDEALRRPGRFDREIV 367

Query: 575 IDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLA 633
           +               VP    R EIL     GM   L D  +++ L+  T+GFVGADLA
Sbjct: 368 V--------------GVPDERGRREILGIHTRGM--PLGDRVDLDELARTTYGFVGADLA 411

Query: 634 ALCNEAALVCLRR 646
           AL  EAA+  +R+
Sbjct: 412 ALAREAAIEAVRK 424



 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 132/244 (54%), Gaps = 29/244 (11%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG+RP KG LL+GPPGTGKT LA+  A ++  N       +++S+ YGESEQ + ++F  
Sbjct: 505 LGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANFIATKSSDLLSKWYGESEQQIAKLFAR 564

Query: 499 ASQSAPAVVFIDELDAIAPARKDG-GE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 556
           A Q AP V+FIDELD++ P R  G GE ++++R+V T+L  MDG+     V+VI ATNRP
Sbjct: 565 ARQVAPCVIFIDELDSLVPTRGSGMGEPQVTERVVNTILAEMDGLEELQSVVVIGATNRP 624

Query: 557 DSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSE 616
           + I+PAL RPGR D  I +               VPS   R  IL    + M  +  D +
Sbjct: 625 NLIDPALLRPGRFDELIYV--------------GVPSRDGRARILAIQTAKMPIA-EDVD 669

Query: 617 VEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQD 676
           ++ L+  T  F GADL  L   A L  LR    +Q +   +           H +T L D
Sbjct: 670 LDVLAGRTDRFTGADLEDLVRRAGLTALR--ESLQVTQVTM----------AHFETALAD 717

Query: 677 SDCS 680
           S  S
Sbjct: 718 SRAS 721


>gi|225456951|ref|XP_002281671.1| PREDICTED: cell division cycle protein 48 homolog [Vitis vinifera]
 gi|297733738|emb|CBI14985.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/309 (45%), Positives = 196/309 (63%), Gaps = 12/309 (3%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 461  FQTALGSSNPSALRETVVEVPNVSWEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPS 520

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 521  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 580

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 581  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDP 640

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++  LA  + G +GADI+ IC
Sbjct: 641  ALLRPGRLDQLIYIPLPDEASRLQIFKACLRKSPVSRDVDLVALARYTHGFSGADITEIC 700

Query: 989  REAAISAIEENLDASRITMQHLKT----AIRHVQPSEIHSYK----ELSAKFQRLVHSNA 1040
            + +   AI EN++   I  +  KT    A+      ++   K    E S KF R   S +
Sbjct: 701  QRSCKYAIRENIEKD-IERERKKTENPEAMEEDDVDDVPEIKAAHFEESMKFAR--RSVS 757

Query: 1041 EADESGYQL 1049
            +AD   YQL
Sbjct: 758  DADIRKYQL 766



 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 209  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 268

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DE+D +A  R K    
Sbjct: 269  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHG- 327

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 328  -EVERRIVSQLLTLMDGLKTRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 386

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  S DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 387  LEVLRIHTKNMKLSDDVDLERVAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 446

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 447  DAEVLNSMAVTNEHFQTALGSSNPSALR 474



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/234 (45%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 215 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 274

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDELD+IAP R+    E+ +R+V
Sbjct: 275 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIV 334

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 335 SQLLTLMDGLKTRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 380

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ S  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 381 PDEVGRLEVLRIHTKNMKLS-DDVDLERVAKDTHGYVGADLAALCTEAALQCIR 433



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/216 (41%), Positives = 123/216 (56%), Gaps = 24/216 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 512 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 571

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 572 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMTAKKTVFIIG 630

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P  A RL+I  A L     S
Sbjct: 631 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEASRLQIFKACL---RKS 673

Query: 612 LLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            +  +V+ +++A  THGF GAD+  +C  +    +R
Sbjct: 674 PVSRDVDLVALARYTHGFSGADITEICQRSCKYAIR 709


>gi|147782460|emb|CAN61919.1| hypothetical protein VITISV_038729 [Vitis vinifera]
          Length = 802

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/309 (45%), Positives = 196/309 (63%), Gaps = 12/309 (3%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 449  FQTALGSSNPSALRETVVEVPNVSWEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPS 508

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 509  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 568

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 569  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDP 628

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++  LA  + G +GADI+ IC
Sbjct: 629  ALLRPGRLDQLIYIPLPDEASRLQIFKACLRKSPVSRDVDLVALARYTHGFSGADITEIC 688

Query: 989  REAAISAIEENLDASRITMQHLKT----AIRHVQPSEIHSYK----ELSAKFQRLVHSNA 1040
            + +   AI EN++   I  +  KT    A+      ++   K    E S KF R   S +
Sbjct: 689  QRSCKYAIRENIEKD-IERERKKTENPEAMEEDDVDDVPEIKAAHFEESMKFAR--RSVS 745

Query: 1041 EADESGYQL 1049
            +AD   YQL
Sbjct: 746  DADIRKYQL 754



 Score =  229 bits (584), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 163/268 (60%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 197  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 256

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DE+D +A  R K    
Sbjct: 257  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHG- 315

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V VI ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 316  -EVERRIVSQLLTLMDGLKTRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 374

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  S DV++  +A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 375  LEVLRIHTKNMKLSDDVDLERVAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 434

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 435  DAEVLNSMAVTNEHFQTALGSSNPSALR 462



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/234 (45%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 203 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 262

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDELD+IAP R+    E+ +R+V
Sbjct: 263 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIV 322

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+VI ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 323 SQLLTLMDGLKTRAHVIVIGATNRPNSIDPALRRFGRFDREIDI--------------GV 368

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ S  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 369 PDEVGRLEVLRIHTKNMKLS-DDVDLERVAKDTHGYVGADLAALCTEAALQCIR 421



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/216 (41%), Positives = 123/216 (56%), Gaps = 24/216 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 500 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 559

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 560 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMTAKKTVFIIG 618

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P  A RL+I  A L     S
Sbjct: 619 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEASRLQIFKACL---RKS 661

Query: 612 LLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            +  +V+ +++A  THGF GAD+  +C  +    +R
Sbjct: 662 PVSRDVDLVALARYTHGFSGADITEICQRSCKYAIR 697


>gi|357623246|gb|EHJ74479.1| transitional endoplasmic reticulum ATPase TER94 [Danaus plexippus]
          Length = 1316

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 128/287 (44%), Positives = 192/287 (66%), Gaps = 5/287 (1%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F  A  K  PSA+RE ++EVP V W D+GG + VK +L E V++P +H + F
Sbjct: 953  SLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLQNVKRELQELVQYPVEHPDKF 1012

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 1013 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIF 1072

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR+ +P ++FFDE+D +A  RG   SD    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 1073 DKARSASPCVLFFDELDSIAKSRGGSVSDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 1132

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE I R +LRK P + DV++  +A +++G +
Sbjct: 1133 NRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFS 1192

Query: 981  GADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKE 1027
            GAD++ IC+ A   AI + ++A      H + A +  QP+ +    E
Sbjct: 1193 GADLTEICQRACKLAIRQAIEAE----IHRERARQQSQPAAVMDMDE 1235



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/230 (47%), Positives = 150/230 (65%), Gaps = 2/230 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P +H   FK IG +PP GILM+GPPG  KTL+ARAVA+
Sbjct: 710  VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 769

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K     
Sbjct: 770  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHG-- 827

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DG+ +  +V V+AATNRP+ IDPAL R GRFDR + +G P+ T R 
Sbjct: 828  EVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRL 887

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
            EI RIH + +    DV++ ++A  S G  GAD++ +C EAA+  I E +D
Sbjct: 888  EILRIHTKNMKLGDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMD 937



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 103/234 (44%), Positives = 156/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG  K+ A +K+++ +     S   ++G++P +G+L++GPPGTGKT +AR  A+++G  
Sbjct: 715 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAF 774

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDELDAIAP R+    E+ +R+V
Sbjct: 775 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV 834

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ ++  V+V+AATNRP+SI+PALRR GR DREI+I               +
Sbjct: 835 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI--------------GI 880

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEIL      M+    D ++E ++  +HG VGADLA+LC+EAAL  +R
Sbjct: 881 PDATGRLEILRIHTKNMKLG-DDVDLEQIAAESHGHVGADLASLCSEAALQQIR 933



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 158/316 (50%), Gaps = 39/316 (12%)

Query: 344  ADLTNERSQPQVTESMD------HESNAFVINH---ETKVYLYPPLNAVSKSLREGTLPN 394
            A L +E +  Q+ E MD       + +A V+N        + Y    +   +LRE     
Sbjct: 921  ASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETV--- 977

Query: 395  AQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPG 454
              +E  NV  T   DI  L  + +E   L    +    K      G++P++GVL +GPPG
Sbjct: 978  --VEVPNVTWT---DIGGLQNVKRELQELVQYPVEHPDK--FLKFGMQPSRGVLFYGPPG 1030

Query: 455  TGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDA 514
             GKT LA+  A++   N  +V GPE+++  +GESE  + ++FD A  ++P V+F DELD+
Sbjct: 1031 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDS 1090

Query: 515  IAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLD 570
            IA +R     D G   + R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRLD
Sbjct: 1091 IAKSRGGSVSDAGGA-ADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLD 1149

Query: 571  REIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGA 630
            + I I +              P    R  IL A L     +  D ++ Y++  T GF GA
Sbjct: 1150 QLIYIPL--------------PDEKSREAILRANLRKSPIA-KDVDLSYIAKVTQGFSGA 1194

Query: 631  DLAALCNEAALVCLRR 646
            DL  +C  A  + +R+
Sbjct: 1195 DLTEICQRACKLAIRQ 1210


>gi|448734971|ref|ZP_21717190.1| ATPase AAA [Halococcus salifodinae DSM 8989]
 gi|445799025|gb|EMA49407.1| ATPase AAA [Halococcus salifodinae DSM 8989]
          Length = 755

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 141/307 (45%), Positives = 196/307 (63%), Gaps = 16/307 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            A+++   D + A   + PSA+REV +EVP V WE VGG  + K +L E V+WP  + E F
Sbjct: 433  AMQVTREDVKGALKGIEPSALREVFVEVPDVTWESVGGLGDTKERLRETVQWPLDYPEVF 492

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
            + +      G++M+GPPG  KTL+A+AVA+EA  NF+++KGPEL +K+VGESEK VR +F
Sbjct: 493  EAMDMNAAKGVMMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVREVF 552

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 921
            +KAR NAP++IFFDEID +A  RG+      V +RV+SQLL ELDGL +  +V VIA +N
Sbjct: 553  SKARENAPTVIFFDEIDSIAGERGRNMGDSGVGERVVSQLLTELDGLEELEDVVVIATSN 612

Query: 922  RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 981
            RPD ID ALLRPGR DR ++V  P+E  RE IF +H R  P +  +++ +LA  ++G  G
Sbjct: 613  RPDLIDSALLRPGRLDRHVHVPVPDEDAREAIFEVHTRGKPLADGIDLADLARRTKGYVG 672

Query: 982  ADISLICREAAISA----IE----ENLDAS----RITMQHLKTAIRHVQPSEIHS----Y 1025
            ADI  + REAA++A    IE    E++D S    RI   H + A+  V  S        Y
Sbjct: 673  ADIEAVTREAAMAATREFIESVDPEDIDGSVGNVRIDESHFEDALSEVTASVTEETRERY 732

Query: 1026 KELSAKF 1032
             E+  +F
Sbjct: 733  DEIEERF 739



 Score =  222 bits (565), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 112/266 (42%), Positives = 170/266 (63%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 188  PSVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLIAKAV 247

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   +F  + GPE+ SK+ GESE+ +R +F +A  N P+IIF DEID +A  R + S 
Sbjct: 248  ANEIDAHFETISGPEIMSKYYGESEEQLREMFDEAEENEPAIIFIDEIDSIAPKRDETSG 307

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
               V  RV++QLL  +DGL +R  VTVIAATNR D IDPAL R GRFDR + +G P++  
Sbjct: 308  --DVERRVVAQLLSLMDGLEERGQVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDKGG 365

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EEN 999
            R+EI ++H R +P + D+++ + A  + G  G+DI  + +E+A++A+          EE 
Sbjct: 366  RKEILQVHTRGMPLADDIDLDQYAENTHGFVGSDIESLAKESAMNALRRIRPELDLDEEE 425

Query: 1000 LDAS-----RITMQHLKTAIRHVQPS 1020
            +DA      ++T + +K A++ ++PS
Sbjct: 426  VDAEVLEAMQVTREDVKGALKGIEPS 451



 Score =  196 bits (497), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 149/235 (63%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   +
Sbjct: 195 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAH 254

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L E+FD A ++ PA++FIDE+D+IAP R +   ++ +R+V
Sbjct: 255 FETISGPEIMSKYYGESEEQLREMFDEAEENEPAIIFIDEIDSIAPKRDETSGDVERRVV 314

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 315 AQLLSLMDGLEERGQVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 360

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM  +  D +++  +  THGFVG+D+ +L  E+A+  LRR
Sbjct: 361 PDKGGRKEILQVHTRGMPLA-DDIDLDQYAENTHGFVGSDIESLAKESAMNALRR 414



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 21/261 (8%)

Query: 435 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 494
              ++ +   KGV+++GPPGTGKT LA+  A+++  N  ++ GPE++++  GESE+ + E
Sbjct: 491 VFEAMDMNAAKGVMMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGESEKGVRE 550

Query: 495 VFDSASQSAPAVVFIDELDAIAP--ARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           VF  A ++AP V+F DE+D+IA    R  G   + +R+V+ LL  +DG+   + V+VIA 
Sbjct: 551 VFSKARENAPTVIFFDEIDSIAGERGRNMGDSGVGERVVSQLLTELDGLEELEDVVVIAT 610

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           +NRPD I+ AL RPGRLDR + +               VP    R  I      G    L
Sbjct: 611 SNRPDLIDSALLRPGRLDRHVHV--------------PVPDEDAREAIFEVHTRG--KPL 654

Query: 613 LDS-EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSD 671
            D  ++  L+  T G+VGAD+ A+  EAA+   R + +     D+  S G +   E H +
Sbjct: 655 ADGIDLADLARRTKGYVGADIEAVTREAAMAATREFIESVDPEDIDGSVGNVRIDESHFE 714

Query: 672 TMLQDSDCSRNITESSRDCLD 692
             L  S+ + ++TE +R+  D
Sbjct: 715 DAL--SEVTASVTEETRERYD 733


>gi|224069527|ref|XP_002326365.1| predicted protein [Populus trichocarpa]
 gi|222833558|gb|EEE72035.1| predicted protein [Populus trichocarpa]
          Length = 810

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 126/253 (49%), Positives = 175/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 458  FKTALGTSNPSALRETVVEVPNVSWEDIGGLETVKRELQETVQYPVEHPEKFEKFGMSPS 517

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF+++KGPEL + W GESE  VR +F KAR +AP
Sbjct: 518  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 577

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDP
Sbjct: 578  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 637

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R +IF+  LRK P S DV++  LA  ++G +GADI+ IC
Sbjct: 638  ALLRPGRLDQLIYIPLPDEESRFQIFKSCLRKSPVSKDVDLTALAKYTQGFSGADITEIC 697

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 698  QRACKYAIRENIE 710



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/277 (44%), Positives = 170/277 (61%), Gaps = 17/277 (6%)

Query: 762  MREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCS 821
            +RE    + +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  
Sbjct: 197  LREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 256

Query: 822  KTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA 881
            KTL+ARAVA+E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A
Sbjct: 257  KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 316

Query: 882  AIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLY 941
              R K ++G  V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + 
Sbjct: 317  PKREK-TNG-EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 374

Query: 942  VGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
            +G P+E  R E+ RIH + +  + DV++  +A  + G  GAD++ +C EAA+  I E +D
Sbjct: 375  IGVPDEVGRLEVLRIHTKNMRLAEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 434

Query: 1002 ---------------ASRITMQHLKTAIRHVQPSEIH 1023
                           +  +T +H KTA+    PS + 
Sbjct: 435  VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 471



 Score =  203 bits (516), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 103/234 (44%), Positives = 154/234 (65%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 212 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 271

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 272 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 331

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 332 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 377

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M  +  D ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 378 PDEVGRLEVLRIHTKNMRLA-EDVDLERIAKDTHGYVGADLAALCTEAALQCIR 430



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  ++ GPE+++  +GESE  + E+
Sbjct: 509 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 568

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 569 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 627

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  + L     S
Sbjct: 628 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEESRFQIFKSCLRKSPVS 673

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 674 -KDVDLTALAKYTQGFSGADITEICQRACKYAIR 706


>gi|224133614|ref|XP_002321618.1| predicted protein [Populus trichocarpa]
 gi|222868614|gb|EEF05745.1| predicted protein [Populus trichocarpa]
          Length = 813

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 125/244 (51%), Positives = 171/244 (70%), Gaps = 1/244 (0%)

Query: 759  PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 818
            PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P  G+L +GPP
Sbjct: 470  PSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPP 529

Query: 819  GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 878
            GC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP ++FFDE+D
Sbjct: 530  GCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELD 589

Query: 879  GLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 937
             +A  RG    D    +DRV++QLL E+DG+  +  V +I ATNRPD IDPALLRPGR D
Sbjct: 590  SIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLD 649

Query: 938  RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 997
            +L+Y+  P+E  R +IF+  LRK P S DV++  LA  + G +GADI+ IC+ A   AI 
Sbjct: 650  QLIYIPLPDEASRLQIFKACLRKSPVSKDVDLTALARYTNGFSGADITEICQRACKYAIR 709

Query: 998  ENLD 1001
            EN++
Sbjct: 710  ENIE 713



 Score =  227 bits (579), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 117/268 (43%), Positives = 164/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 209  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 268

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 269  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 327

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 328  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 386

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + +V++ ++A  + G  GAD++ +C EAA+  I E +D         
Sbjct: 387  LEVLRIHTKNMKLAEEVDLEKVAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDTI 446

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 447  DAEVLNSMAVTNEHFRTALGTSNPSALR 474



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/234 (43%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 215 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 274

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 275 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 334

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 335 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 380

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  + ++E ++  THG+VGADLAALC EAAL C+R
Sbjct: 381 PDEVGRLEVLRIHTKNMKLA-EEVDLEKVAKDTHGYVGADLAALCTEAALQCIR 433



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 120/214 (56%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 512 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 571

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 572 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMTAKKTVFIIG 630

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P  A RL+I  A L     S
Sbjct: 631 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEASRLQIFKACLRKSPVS 676

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T+GF GAD+  +C  A    +R
Sbjct: 677 -KDVDLTALARYTNGFSGADITEICQRACKYAIR 709


>gi|354610712|ref|ZP_09028668.1| AAA family ATPase, CDC48 subfamily [Halobacterium sp. DL1]
 gi|353195532|gb|EHB61034.1| AAA family ATPase, CDC48 subfamily [Halobacterium sp. DL1]
          Length = 758

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 139/309 (44%), Positives = 202/309 (65%), Gaps = 16/309 (5%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+ A   + PSA+REV +EVP V W+ VGG  E K +L E ++WP  + E F  +    
Sbjct: 442  DFKDALKGIEPSALREVFVEVPDVTWDQVGGLGETKERLRETIQWPLDYPEVFASMDLDS 501

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G+L++GPPG  KTL+A+AVA+EA  NF++VKGPEL +K+VGESEK VR +F KAR+NA
Sbjct: 502  AKGVLLYGPPGTGKTLLAKAVANEANSNFISVKGPELLNKYVGESEKGVREVFEKARSNA 561

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P+++FFDEID +A  RG+      V +RV+SQLL ELDG+ +  +V V+A TNRPD ID 
Sbjct: 562  PTVVFFDEIDSIAGERGRGMSDSGVGERVVSQLLTELDGIEELEDVVVVATTNRPDLIDN 621

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR DR ++V  P+E  R  I ++H R  P + DV++ +LA  ++G  GADI  + 
Sbjct: 622  ALLRPGRLDRHVHVPVPDEEARRAILKVHTRNKPLADDVDLDDLATRTDGYVGADIEALA 681

Query: 989  REAAISAIE------------ENLDASRITMQHLKTAIRHVQPS---EI-HSYKELSAKF 1032
            REA ++A              E++D  R+TM+H + A+  V+PS   E+   Y+E+ ++F
Sbjct: 682  REATMNATREFINSVDPEEAIESVDNVRVTMEHFENALGEVKPSVDEEVREEYQEIESRF 741

Query: 1033 QRLVHSNAE 1041
            ++    ++E
Sbjct: 742  EKAEAPDSE 750



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 113/266 (42%), Positives = 170/266 (63%), Gaps = 17/266 (6%)

Query: 770  PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
            P V +ED+GG      Q+ E +E P +H E F+++G  PP G+L+ GPPG  KTL+A+AV
Sbjct: 190  PNVAYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLIAKAV 249

Query: 830  ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESD 889
            A+E   NF  + GPE+ SK+ GESE+ +R +F +A  NAP+I+F DE+D +A  RG E+ 
Sbjct: 250  ANEIDANFQTISGPEIMSKYYGESEEKLREVFDEAEENAPAIVFIDELDSIAPKRG-ETQ 308

Query: 890  GVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETD 949
            G  V  RV++QLL  +DGL +R +VTVIAATNR D IDPAL R GRFDR + +G P++  
Sbjct: 309  G-DVERRVVAQLLSLMDGLEERGDVTVIAATNRVDAIDPALRRGGRFDREIEIGVPDQDG 367

Query: 950  REEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------ 997
            R+EI ++H R +P +  V++   +  + G  GAD+  + +EAA++A+             
Sbjct: 368  RKEILQVHTRGMPLADGVDLDSFSESTHGFVGADLESLAKEAAMNALRRIRPDIDLEANE 427

Query: 998  ---ENLDASRITMQHLKTAIRHVQPS 1020
               E L++ R+T +  K A++ ++PS
Sbjct: 428  IDAELLESIRVTERDFKDALKGIEPS 453



 Score =  206 bits (525), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/236 (48%), Positives = 151/236 (63%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL +E   ++++I +          LG+ P KGVLLHGPPGTGKT +A+  A++   N
Sbjct: 197 IGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTLIAKAVANEIDAN 256

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             T++GPE++S+ YGESE+ L EVFD A ++APA+VFIDELD+IAP R +   ++ +R+V
Sbjct: 257 FQTISGPEIMSKYYGESEEKLREVFDEAEENAPAIVFIDELDSIAPKRGETQGDVERRVV 316

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL+LMDG+     V VIAATNR D+I+PALRR GR DREIEI               V
Sbjct: 317 AQLLSLMDGLEERGDVTVIAATNRVDAIDPALRRGGRFDREIEI--------------GV 362

Query: 592 PSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R EIL     GM   L D  +++  S +THGFVGADL +L  EAA+  LRR
Sbjct: 363 PDQDGRKEILQVHTRGM--PLADGVDLDSFSESTHGFVGADLESLAKEAAMNALRR 416



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 137/240 (57%), Gaps = 18/240 (7%)

Query: 411 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 469
            ++GGL +    L++ I          +S+ L   KGVLL+GPPGTGKT LA+  A+++ 
Sbjct: 468 DQVGGLGETKERLRETIQWPLDYPEVFASMDLDSAKGVLLYGPPGTGKTLLAKAVANEAN 527

Query: 470 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LS 527
            N  +V GPE++++  GESE+ + EVF+ A  +AP VVF DE+D+IA  R  G  +  + 
Sbjct: 528 SNFISVKGPELLNKYVGESEKGVREVFEKARSNAPTVVFFDEIDSIAGERGRGMSDSGVG 587

Query: 528 QRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNS 587
           +R+V+ LL  +DG+   + V+V+A TNRPD I+ AL RPGRLDR + +            
Sbjct: 588 ERVVSQLLTELDGIEELEDVVVVATTNRPDLIDNALLRPGRLDRHVHV------------ 635

Query: 588 PAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
              VP    R  IL  + +  +    D +++ L+  T G+VGAD+ AL  EA +   R +
Sbjct: 636 --PVPDEEARRAILK-VHTRNKPLADDVDLDDLATRTDGYVGADIEALAREATMNATREF 692


>gi|357509249|ref|XP_003624913.1| Cell division control protein-like protein [Medicago truncatula]
 gi|124361206|gb|ABN09178.1| AAA ATPase, central region [Medicago truncatula]
 gi|355499928|gb|AES81131.1| Cell division control protein-like protein [Medicago truncatula]
          Length = 560

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 152/351 (43%), Positives = 214/351 (60%), Gaps = 18/351 (5%)

Query: 680  SRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEK 739
            +R I   S+D    A+ C   +   L    L    +  E +DN +  V+DSS        
Sbjct: 207  TRKIPRDSQDLEYVAASCNGYVGADLRDLCLEAVKSAIERSDNANKDVNDSS-------- 258

Query: 740  GCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQE 799
                 L + D++ AR  V+PS  R + +E+PKV W+D+GG ++VKT+L +A+EWP KH +
Sbjct: 259  -----LTMEDWKNARSLVQPSITRGITVEIPKVTWKDIGGLKDVKTKLEQAIEWPMKHPD 313

Query: 800  AFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRS 859
            AF R+G  P  GIL+ GPPGCSKT +A+A A+ A + F ++   ELFS +VG+ E  +R 
Sbjct: 314  AFSRLGITPIRGILLHGPPGCSKTTLAKAAANAANVPFFSLSCAELFSMYVGDGEGLLRE 373

Query: 860  LFAKARANAPSIIFFDEIDGLAAIRGKESD-GVSVSDRVMSQLLVELDGLHQRVNVTVIA 918
            +F KAR    SIIFFDE D +A  RG  S  G  V +R++S LL E+DGL +   V V+A
Sbjct: 374  IFQKARLAGKSIIFFDEADIVAGKRGDSSSGGAVVGERLLSTLLTEMDGLEEAKGVLVLA 433

Query: 919  ATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEG 978
            ATNRP  ID AL+RPGRFD +LYV PP+   R EI ++H R +   SDV++R+LA  +E 
Sbjct: 434  ATNRPYAIDAALMRPGRFDLILYVPPPDLEGRFEILKVHTRGMNLGSDVDLRKLAEDTEL 493

Query: 979  CTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSY 1025
             TGA++  +C+E  I A+ EN+DAS +   H KTA   ++P+    EI SY
Sbjct: 494  FTGAELQGLCKEVGIVALRENIDASVVYDHHFKTAKNSLKPALTAEEIVSY 544



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/263 (38%), Positives = 141/263 (53%), Gaps = 20/263 (7%)

Query: 773  KWEDV-GGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            K EDV GG  +    L E + +P+      K++G + P G+L++GPPG  KT + RA+  
Sbjct: 17   KAEDVVGGNAKAIQILRELITYPRLFTSEAKQLGLKFPRGLLLYGPPGTGKTSLVRAIVE 76

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP----SIIFFDEIDGLAAIRGKE 887
            E G N   +    + S   GESE+ +R  F++A ++A     S+IF DEIDGL   R   
Sbjct: 77   ECGANLTIISPNTVNSALAGESERNLREAFSEASSHAALGKSSVIFIDEIDGLCPRR--- 133

Query: 888  SDGVSVSD-RVMSQLLVELD---GLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
             D +   D R+ SQL   +D          V V+A+TNR D IDPAL R GRFD    V 
Sbjct: 134  -DSIRELDVRIASQLCTLMDSNKATSSNPGVVVVASTNRVDAIDPALRRYGRFDIETEVT 192

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------ 997
             PNE +R +I  ++ RKIP  S  ++  +A    G  GAD+  +C EA  SAIE      
Sbjct: 193  VPNEEERLQILELYTRKIPRDSQ-DLEYVAASCNGYVGADLRDLCLEAVKSAIERSDNAN 251

Query: 998  ENLDASRITMQHLKTAIRHVQPS 1020
            ++++ S +TM+  K A   VQPS
Sbjct: 252  KDVNDSSLTMEDWKNARSLVQPS 274



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/280 (37%), Positives = 154/280 (55%), Gaps = 29/280 (10%)

Query: 413 LGGLSKEYAILKDIIISSSV-KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG +K   IL+++I    +  S    LGL+  +G+LL+GPPGTGKTSL R    + G N
Sbjct: 22  VGGNAKAIQILRELITYPRLFTSEAKQLGLKFPRGLLLYGPPGTGKTSLVRAIVEECGAN 81

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAP----AVVFIDELDAIAPARKDGGEELS 527
           L  ++   V S   GESE+ L E F  AS  A     +V+FIDE+D + P R+D   EL 
Sbjct: 82  LTIISPNTVNSALAGESERNLREAFSEASSHAALGKSSVIFIDEIDGLCP-RRDSIRELD 140

Query: 528 QRMVATLLNLMDGVCRTD---GVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
            R+ + L  LMD    T    GV+V+A+TNR D+I+PALRR GR D E E+         
Sbjct: 141 VRIASQLCTLMDSNKATSSNPGVVVVASTNRVDAIDPALRRYGRFDIETEV--------- 191

Query: 585 KNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 644
                 VP+  +RL+IL      +     D  +EY++ + +G+VGADL  LC EA    +
Sbjct: 192 -----TVPNEEERLQILELYTRKIPRDSQD--LEYVAASCNGYVGADLRDLCLEAVKSAI 244

Query: 645 RRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNIT 684
            R      + DV  S+ T+ +++ ++ +++Q S  +R IT
Sbjct: 245 ERSD--NANKDVNDSSLTMEDWK-NARSLVQPS-ITRGIT 280



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 118/215 (54%), Gaps = 22/215 (10%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
            S LG+ P +G+LLHGPPG  KT+LA+  A+ + V  F+++  E+ S   G+ E  L E+
Sbjct: 315 FSRLGITPIRGILLHGPPGCSKTTLAKAAANAANVPFFSLSCAELFSMYVGDGEGLLREI 374

Query: 496 FDSASQSAPAVVFIDELDAIAPARKD---GGEELSQRMVATLLNLMDGVCRTDGVLVIAA 552
           F  A  +  +++F DE D +A  R D   GG  + +R+++TLL  MDG+    GVLV+AA
Sbjct: 375 FQKARLAGKSIIFFDEADIVAGKRGDSSSGGAVVGERLLSTLLTEMDGLEEAKGVLVLAA 434

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRP +I+ AL RPGR            F L+   P   P    R EIL     GM    
Sbjct: 435 TNRPYAIDAALMRPGR------------FDLILYVPP--PDLEGRFEILKVHTRGMN--- 477

Query: 613 LDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           L S+V+   +A  T  F GA+L  LC E  +V LR
Sbjct: 478 LGSDVDLRKLAEDTELFTGAELQGLCKEVGIVALR 512


>gi|145592820|ref|YP_001157117.1| microtubule-severing ATPase [Salinispora tropica CNB-440]
 gi|145302157|gb|ABP52739.1| Microtubule-severing ATPase [Salinispora tropica CNB-440]
          Length = 750

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 129/276 (46%), Positives = 180/276 (65%), Gaps = 1/276 (0%)

Query: 745  LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 804
            + + D + A   VRP+ M    LE+  V  +DVG   EVK  L E+V WP  +   F R+
Sbjct: 461  MTMADLDAALAVVRPTTMTASTLELASVTLDDVGDLTEVKQTLTESVLWPLTYPGTFARL 520

Query: 805  GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 864
            G +PP G+L++GPPGC KT +  A+A     N L+VKG EL SKWVGESE+AVR LF +A
Sbjct: 521  GVQPPRGVLLYGPPGCGKTYLVTALAGSGRANVLSVKGAELLSKWVGESERAVRELFRRA 580

Query: 865  RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 924
            R  AP+++F DE+D LA +RG+ +DG   +DRV++ LL ELDG+    NV V+ ATNRPD
Sbjct: 581  REAAPTLVFLDEVDALAPVRGQATDG-GTADRVVAALLTELDGVESLRNVVVVGATNRPD 639

Query: 925  KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 984
             +DPALLRPGR +RL+YV PP+E  R EI R   R +P + +V++  LA   +G + AD 
Sbjct: 640  LVDPALLRPGRMERLVYVPPPDEAGRAEILRAASRTVPLAPEVDLGALAGDLDGFSAADC 699

Query: 985  SLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
            + + REA ++A+ E+L A+ +T  H+  A   V+PS
Sbjct: 700  AALVREAVLAAMRESLAAATVTTAHVAVARARVRPS 735



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 148/272 (54%), Gaps = 31/272 (11%)

Query: 380 LNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSK-EYAILKDIIISSSVKSTLSS 438
           L+A    +R  T+  + +E  +V       +  +G L++ +  + + ++   +   T + 
Sbjct: 466 LDAALAVVRPTTMTASTLELASVT------LDDVGDLTEVKQTLTESVLWPLTYPGTFAR 519

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
           LG++P +GVLL+GPPG GKT L    A     N+ +V G E++S+  GESE+A+ E+F  
Sbjct: 520 LGVQPPRGVLLYGPPGCGKTYLVTALAGSGRANVLSVKGAELLSKWVGESERAVRELFRR 579

Query: 499 ASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           A ++AP +VF+DE+DA+AP R    DGG   + R+VA LL  +DGV     V+V+ ATNR
Sbjct: 580 AREAAPTLVFLDEVDALAPVRGQATDGGT--ADRVVAALLTELDGVESLRNVVVVGATNR 637

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           PD ++PAL RPGR++R + +                P  A R EIL A         L  
Sbjct: 638 PDLVDPALLRPGRMERLVYVPP--------------PDEAGRAEILRA---ASRTVPLAP 680

Query: 616 EVEYLSMA--THGFVGADLAALCNEAALVCLR 645
           EV+  ++A    GF  AD AAL  EA L  +R
Sbjct: 681 EVDLGALAGDLDGFSAADCAALVREAVLAAMR 712



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 11/252 (4%)

Query: 775  EDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAG 834
            E++ G R     L E ++    H    +R+GT    G+L+ GP G  K+ + RAVA++ G
Sbjct: 238  EELPGLRAQAEDLTELLDLGFHHGAVLRRLGTTVALGVLLDGPAGSGKSALVRAVAAQVG 297

Query: 835  LNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVS 894
                 V GPEL +     + + +R+  A  R + P+++   +++ L       +      
Sbjct: 298  ARVRPVWGPELAALTNSAAAERLRAAAAAVRTDGPAVLLVTDVEAL-----APAAAPGPV 352

Query: 895  DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIF 954
              V  Q++ E           V+  T+R D +DPAL  P      + +  P+   R+E  
Sbjct: 353  TTVFRQVVAE----TVAAGAAVVCTTSRLDAVDPALRTPDLLSLRVSIPLPDAALRQEQL 408

Query: 955  RIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI--EENLDASRITMQHLKT 1012
             +  R++  + DV + E+A  + G   AD++ + REA + A   ++ ++   +TM  L  
Sbjct: 409  EVLTRQVSLAEDVRLDEVAARTPGFVAADLAALIREAGVRAALRQKTVERPSMTMADLDA 468

Query: 1013 AIRHVQPSEIHS 1024
            A+  V+P+ + +
Sbjct: 469  ALAVVRPTTMTA 480



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 29/253 (11%)

Query: 406 VEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLC 464
           V   + +L GL  +   L +++ +     + L  LG     GVLL GP G+GK++L R  
Sbjct: 233 VTPTVEELPGLRAQAEDLTELLDLGFHHGAVLRRLGTTVALGVLLDGPAGSGKSALVRAV 292

Query: 465 AHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGE 524
           A   G  +  V GPE+ +     + + L     +     PAV+ + +++A+A        
Sbjct: 293 AAQVGARVRPVWGPELAALTNSAAAERLRAAAAAVRTDGPAVLLVTDVEALA-------P 345

Query: 525 ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLL 584
             +   V T+   +       G  V+  T+R D+++PALR P  L   + I +       
Sbjct: 346 AAAPGPVTTVFRQVVAETVAAGAAVVCTTSRLDAVDPALRTPDLLSLRVSIPL------- 398

Query: 585 KNSPAAVPSPAQR---LEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 641
                  P  A R   LE+L   +S  E    D  ++ ++  T GFV ADLAAL  EA +
Sbjct: 399 -------PDAALRQEQLEVLTRQVSLAE----DVRLDEVAARTPGFVAADLAALIREAGV 447

Query: 642 VCLRRYSKIQTSS 654
               R   ++  S
Sbjct: 448 RAALRQKTVERPS 460


>gi|393720040|ref|ZP_10339967.1| AAA ATPase [Sphingomonas echinoides ATCC 14820]
          Length = 762

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 141/314 (44%), Positives = 196/314 (62%), Gaps = 11/314 (3%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF  A  +V+PSAMREV++E P+V+W+DVGG    + +L E VE P K  +AF+R+G RP
Sbjct: 450  DFVDALKRVQPSAMREVMVEAPRVRWDDVGGLDSAQMRLKEGVELPLKDPDAFRRLGIRP 509

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
              G L++GPPG  KTL+A+AVA EA  NF+A +  +L SKW GESE+ +  LFA+AR  A
Sbjct: 510  AKGFLLYGPPGTGKTLLAKAVAREAQANFIATRSSDLLSKWYGESEQQIAKLFARARQVA 569

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P +IF DE+D L   RG       V++RV++ +L E+DGL +  +V VI ATNRP+ IDP
Sbjct: 570  PCVIFIDELDSLVPARGGGLGEPQVTERVVNTILAEMDGLEELQSVVVIGATNRPNLIDP 629

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGRFD L+YVG P+   R  I  I   K+P + DVN+ ELA  ++  TGAD+  + 
Sbjct: 630  ALLRPGRFDELIYVGVPSLDGRARILAIQTAKMPIAEDVNLDELARRTDRFTGADLEDLV 689

Query: 989  REAAISAIEENLDASRITMQHLKTAIRH----VQPSEIHSYKELSAKFQRLVHSNAEADE 1044
            R A ++A+ E+L  +++TM H + A+      V P     Y+ +S    RL    A    
Sbjct: 690  RRAGLTALRESLAVTQVTMAHFEIALGESRASVTPELEREYESMST---RLKQDAASLQP 746

Query: 1045 SGY----QLRPSKS 1054
             G+    QLRP + 
Sbjct: 747  IGFVSPGQLRPREG 760



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/267 (43%), Positives = 157/267 (58%), Gaps = 17/267 (6%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG      QL E VE P ++ E F+R+G  PP G+L+ GPPG  KT +ARAVA+
Sbjct: 200  VTYDDIGGMGPTIDQLREMVELPLRYPELFQRLGVDPPKGVLLHGPPGTGKTRLARAVAN 259

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E+   F  + GPE+     GESE  +R +F +A   APSI+F DEID +A  RG+ S   
Sbjct: 260  ESAAEFFLINGPEIMGSAYGESEGKLRQVFEEAAKAAPSIVFIDEIDSIAPKRGQVSG-- 317

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
                R+++QLL  +DGL  R NV VIAATNRP+ ID AL RPGRFDR + VG P+E  R 
Sbjct: 318  EAEKRLVAQLLTLMDGLEARANVVVIAATNRPEAIDEALRRPGRFDREIVVGVPDERGRR 377

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE-------------- 997
            EI  IH R +P    V++ ELA  + G  GAD++ + REAAI A+               
Sbjct: 378  EILGIHTRGMPLGDRVDLDELARTTYGFVGADLAALAREAAIEAVRKLMPRLNLSEGTIP 437

Query: 998  -ENLDASRITMQHLKTAIRHVQPSEIH 1023
             E LD   +T +    A++ VQPS + 
Sbjct: 438  PEILDTLAVTREDFVDALKRVQPSAMR 464



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/253 (43%), Positives = 153/253 (60%), Gaps = 20/253 (7%)

Query: 398 EFQNVQATVEQDIS--KLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPG 454
           E++  +     D++   +GG+      L++++ +          LG+ P KGVLLHGPPG
Sbjct: 188 EYEEPKEARRADVTYDDIGGMGPTIDQLREMVELPLRYPELFQRLGVDPPKGVLLHGPPG 247

Query: 455 TGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDA 514
           TGKT LAR  A++S    F +NGPE++   YGESE  L +VF+ A+++AP++VFIDE+D+
Sbjct: 248 TGKTRLARAVANESAAEFFLINGPEIMGSAYGESEGKLRQVFEEAAKAAPSIVFIDEIDS 307

Query: 515 IAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIE 574
           IAP R     E  +R+VA LL LMDG+     V+VIAATNRP++I+ ALRRPGR DREI 
Sbjct: 308 IAPKRGQVSGEAEKRLVAQLLTLMDGLEARANVVVIAATNRPEAIDEALRRPGRFDREIV 367

Query: 575 IDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVGADLA 633
           +               VP    R EIL     GM   L D  +++ L+  T+GFVGADLA
Sbjct: 368 V--------------GVPDERGRREILGIHTRGM--PLGDRVDLDELARTTYGFVGADLA 411

Query: 634 ALCNEAALVCLRR 646
           AL  EAA+  +R+
Sbjct: 412 ALAREAAIEAVRK 424



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/236 (40%), Positives = 130/236 (55%), Gaps = 18/236 (7%)

Query: 413 LGGLSKEYAILKD-IIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL      LK+ + +          LG+RP KG LL+GPPGTGKT LA+  A ++  N
Sbjct: 478 VGGLDSAQMRLKEGVELPLKDPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAQAN 537

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDG-GE-ELSQR 529
                  +++S+ YGESEQ + ++F  A Q AP V+FIDELD++ PAR  G GE ++++R
Sbjct: 538 FIATRSSDLLSKWYGESEQQIAKLFARARQVAPCVIFIDELDSLVPARGGGLGEPQVTER 597

Query: 530 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPA 589
           +V T+L  MDG+     V+VI ATNRP+ I+PAL RPGR D  I +              
Sbjct: 598 VVNTILAEMDGLEELQSVVVIGATNRPNLIDPALLRPGRFDELIYV-------------- 643

Query: 590 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            VPS   R  IL    + M  +  D  ++ L+  T  F GADL  L   A L  LR
Sbjct: 644 GVPSLDGRARILAIQTAKMPIA-EDVNLDELARRTDRFTGADLEDLVRRAGLTALR 698


>gi|326506470|dbj|BAJ86553.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 569

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 137/287 (47%), Positives = 190/287 (66%), Gaps = 3/287 (1%)

Query: 737  SEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQK 796
            SE G  L L + D+E AR +V+ S +R V  E P V W+D+GG +++K +L +AVEWP K
Sbjct: 261  SEDGKVLTLLMEDWESARSQVKASMIRGVTKEAPTVSWDDIGGLKDLKKKLQQAVEWPIK 320

Query: 797  HQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKA 856
            H  AF R+G  P  G+L+ GPPGCSKT +A+A A  A  +F ++ G EL+SK+VGE E  
Sbjct: 321  HAAAFARLGISPVRGVLLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSKYVGEGEAL 380

Query: 857  VRSLFAKARANAPSIIFFDEIDGLAAIR---GKESDGVSVSDRVMSQLLVELDGLHQRVN 913
            +R  F +AR ++PSIIFFDE D +A  R     ++   +V +R++S LL E+DGL     
Sbjct: 381  LRRTFQRARLSSPSIIFFDEADAIAPKRTGPSGDTGNATVGERLLSTLLTEMDGLELATG 440

Query: 914  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELA 973
            + V+AATNRP  ID ALLRPGRFD +LYV PP+   R+EI RIH RK+    DV++ E+A
Sbjct: 441  IIVLAATNRPKAIDAALLRPGRFDMVLYVPPPDAQGRQEILRIHTRKMKLGEDVDVGEIA 500

Query: 974  CLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPS 1020
              +E  TGAD+  +CREA ++A+  +L AS I   H + AIR ++PS
Sbjct: 501  ERTELFTGADLEGLCREAGMAALRADLSASSIHKAHFEAAIRSLRPS 547



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 138/244 (56%), Gaps = 25/244 (10%)

Query: 423 LKDIIISSSVKSTLSSL-GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
           L++++I   + +  S L GL+  +G+LL+GPPGTGKTSL +    +   +L  +N   V 
Sbjct: 40  LRELVIYPFLYARQSRLLGLKWPRGLLLYGPPGTGKTSLVQAMVRECNAHLTMINPYSVH 99

Query: 482 SQNYGESEQALHEVF----DSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNL 537
             + GE E+ L E F      ASQ  PA++FIDELDAI P R++   E   R+V  LL L
Sbjct: 100 KAHAGEGEKFLREAFSESYSQASQGRPAIIFIDELDAICP-RRNSRREQESRIVGQLLTL 158

Query: 538 MDGVCRTDG----VLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPS 593
           MDG  ++      V+V+A+TNR D+I+PALRRPGR D EIE+               VP+
Sbjct: 159 MDGNKKSSKKLPHVVVVASTNRVDAIDPALRRPGRFDSEIEV--------------TVPT 204

Query: 594 PAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTS 653
             +RL+IL  L S   H     +++ ++   +G+VGADL ALC EAA +  RR S     
Sbjct: 205 LEERLQILK-LYSKNLHLDESVDLQIIAGWCNGYVGADLEALCREAARLAYRRLSNSSED 263

Query: 654 SDVL 657
             VL
Sbjct: 264 GKVL 267



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 119/217 (54%), Gaps = 20/217 (9%)

Query: 434 STLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALH 493
           +  + LG+ P +GVLLHGPPG  KT+LA+  AH +  + F+++G E+ S+  GE E  L 
Sbjct: 323 AAFARLGISPVRGVLLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSKYVGEGEALLR 382

Query: 494 EVFDSASQSAPAVVFIDELDAIAPARKD-----GGEELSQRMVATLLNLMDGVCRTDGVL 548
             F  A  S+P+++F DE DAIAP R       G   + +R+++TLL  MDG+    G++
Sbjct: 383 RTFQRARLSSPSIIFFDEADAIAPKRTGPSGDTGNATVGERLLSTLLTEMDGLELATGII 442

Query: 549 VIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGM 608
           V+AATNRP +I+ AL RPGR D            +L   P   P    R EIL      M
Sbjct: 443 VLAATNRPKAIDAALLRPGRFD-----------MVLYVPP---PDAQGRQEILRIHTRKM 488

Query: 609 EHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           +    D +V  ++  T  F GADL  LC EA +  LR
Sbjct: 489 KLG-EDVDVGEIAERTELFTGADLEGLCREAGMAALR 524



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 121/231 (52%), Gaps = 14/231 (6%)

Query: 773 KW---EDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 829
           +W   E V G R     L E V +P  +    + +G + P G+L++GPPG  KT + +A+
Sbjct: 23  RWRAEEAVAGNRMALQALRELVIYPFLYARQSRLLGLKWPRGLLLYGPPGTGKTSLVQAM 82

Query: 830 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA----PSIIFFDEIDGLAAIRG 885
             E   +   +    +     GE EK +R  F+++ + A    P+IIF DE+D +   R 
Sbjct: 83  VRECNAHLTMINPYSVHKAHAGEGEKFLREAFSESYSQASQGRPAIIFIDELDAICPRRN 142

Query: 886 KESDGVSVSDRVMSQLLVELDGLHQRV----NVTVIAATNRPDKIDPALLRPGRFDRLLY 941
              +  S   R++ QLL  +DG  +      +V V+A+TNR D IDPAL RPGRFD  + 
Sbjct: 143 SRREQES---RIVGQLLTLMDGNKKSSKKLPHVVVVASTNRVDAIDPALRRPGRFDSEIE 199

Query: 942 VGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAA 992
           V  P   +R +I +++ + +     V+++ +A    G  GAD+  +CREAA
Sbjct: 200 VTVPTLEERLQILKLYSKNLHLDESVDLQIIAGWCNGYVGADLEALCREAA 250


>gi|302816419|ref|XP_002989888.1| hypothetical protein SELMODRAFT_269585 [Selaginella moellendorffii]
 gi|300142199|gb|EFJ08901.1| hypothetical protein SELMODRAFT_269585 [Selaginella moellendorffii]
          Length = 805

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 197/323 (60%), Gaps = 15/323 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 458  FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 517

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 518  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDKARQSAP 577

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 578  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 637

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R  IF+  LRK P S DV++  L   ++G +GADI+ IC
Sbjct: 638  ALLRPGRLDQLIYIPLPDEASRLRIFQAALRKSPLSKDVDLEALGRYTQGFSGADITEIC 697

Query: 989  REAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKEL-------SAKFQRLVHSNAE 1041
            + A   AI EN++      +        +   E+    E+       + KF R   S ++
Sbjct: 698  QRACKYAIRENIEKDIEKERRRADNPEAMDEDEVDEIAEIRPAHFEEAMKFAR--RSVSD 755

Query: 1042 ADESGYQ-----LRPSKSIGSNM 1059
            AD   YQ     L+ S+  GS  
Sbjct: 756  ADIRKYQAFAQTLQQSRGFGSEF 778



 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 117/268 (43%), Positives = 164/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 206  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 265

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K    
Sbjct: 266  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQG- 324

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 325  -EVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 383

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++ +++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 384  LEVLRIHTKNMKLAEDVDLEKISHNTHGFVGADLAALCTEAALQCIREKMDVIDLEDETI 443

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T +H +TA+    PS + 
Sbjct: 444  DAEVLSSMAVTNEHFQTALGTSNPSALR 471



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 212 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 271

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 272 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVERRIV 331

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 332 SQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 377

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E +S  THGFVGADLAALC EAAL C+R
Sbjct: 378 PDEVGRLEVLRIHTKNMKLA-EDVDLEKISHNTHGFVGADLAALCTEAALQCIR 430



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + +V
Sbjct: 509 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDV 568

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A QSAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 569 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 627

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P  A RL I  A L     S
Sbjct: 628 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDEASRLRIFQAALRKSPLS 673

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++E L   T GF GAD+  +C  A    +R
Sbjct: 674 -KDVDLEALGRYTQGFSGADITEICQRACKYAIR 706


>gi|326492542|dbj|BAK02054.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 593

 Score =  270 bits (690), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 123/253 (48%), Positives = 175/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 240  FKTALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 299

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF+++KGPEL + W GESE  VR +F KAR +AP
Sbjct: 300  KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAP 359

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 360  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 419

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+   R +IF+  LRK P + D+++  LA  ++G +GADI+ IC
Sbjct: 420  ALLRPGRLDQLIYIPLPDVDSRHQIFKACLRKSPLAKDIDLSALAKYTQGFSGADITEIC 479

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 480  QRACKYAIRENIE 492



 Score =  217 bits (553), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/253 (45%), Positives = 154/253 (60%), Gaps = 17/253 (6%)

Query: 786  QLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPEL 845
            Q+ E VE P +H + FK IG +PP GIL+FGPPG  KTL+ARAVA+E G  F  + GPE+
Sbjct: 3    QIRELVELPLRHPQLFKSIGVKPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEI 62

Query: 846  FSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVEL 905
             SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G  V  R++SQLL  +
Sbjct: 63   MSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG-EVERRIVSQLLTLM 120

Query: 906  DGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS 965
            DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R E+ RIH + +  + 
Sbjct: 121  DGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAE 180

Query: 966  DVNIRELACLSEGCTGADISLICREAAISAIEENLD---------------ASRITMQHL 1010
            DV +  ++  + G  GAD++ +C EAA+  I E +D               +  +T  H 
Sbjct: 181  DVELEHISRDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHF 240

Query: 1011 KTAIRHVQPSEIH 1023
            KTA+    PS + 
Sbjct: 241  KTALTTSNPSALR 253



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 15/215 (6%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
             S+G++P KG+LL GPPG+GKT +AR  A+++G   F +NGPE++S+  GESE  L + 
Sbjct: 18  FKSIGVKPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 77

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V+ LL LMDG+     V+V+ ATNR
Sbjct: 78  FEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNR 137

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P+SI+PALRR GR DREI+I               VP    RLE+L      M+ +  D 
Sbjct: 138 PNSIDPALRRFGRFDREIDI--------------GVPDEVGRLEVLRIHTKNMKLA-EDV 182

Query: 616 EVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           E+E++S  THG+VGADLAALC EAAL C+R    I
Sbjct: 183 ELEHISRDTHGYVGADLAALCTEAALQCIREKMDI 217



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 118/216 (54%), Gaps = 24/216 (11%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  ++ GPE+++  +GESE  + E+
Sbjct: 291 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 350

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A  SAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 351 FDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA-ADRVLNQLLTEMDGMNAKKTVFIIG 409

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    R +I  A L     S
Sbjct: 410 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDVDSRHQIFKACL---RKS 452

Query: 612 LLDSEVEYLSMA--THGFVGADLAALCNEAALVCLR 645
            L  +++  ++A  T GF GAD+  +C  A    +R
Sbjct: 453 PLAKDIDLSALAKYTQGFSGADITEICQRACKYAIR 488


>gi|226288483|gb|EEH43995.1| AAA family ATPase [Paracoccidioides brasiliensis Pb18]
          Length = 754

 Score =  270 bits (690), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 202/307 (65%), Gaps = 12/307 (3%)

Query: 725  NGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVK 784
            +G   SS  M   E    L++E +D   A  + RP+AMREV LE PKV+W D+GGQ ++K
Sbjct: 438  DGAVSSSDVMIPDEN--LLQIEDIDISLALQETRPTAMREVFLETPKVRWSDIGGQHKIK 495

Query: 785  TQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPE 844
             +L +AVE P K  +  KR+      GIL++GPPGCSKTL  +A+A+EAGLNFLAVKG E
Sbjct: 496  RRLQKAVERPLKFPDRMKRLNISGKKGILLYGPPGCSKTLTVKALATEAGLNFLAVKGAE 555

Query: 845  LFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLL 902
            + S +VGESE+A+R +F KAR+ +PSIIFFDEID +AA R  G    G++    V++ LL
Sbjct: 556  ILSMYVGESERALREIFRKARSASPSIIFFDEIDAIAARRNNGPSQGGIN----VLTTLL 611

Query: 903  VELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP 962
             E+DG+ +  NV V+AATN+P+ +DPAL+RPGR D +LYVGPP+   R+EI +I   K  
Sbjct: 612  NEMDGIEELKNVLVVAATNKPEVLDPALMRPGRLDNILYVGPPDLQARKEILKIWFSKSE 671

Query: 963  CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEI 1022
               +V+I  LA +++G +GA++  IC  AA  A++E  +    T Q  K A RH + +  
Sbjct: 672  VDDEVDIDRLAQVTDGYSGAEMVSICETAADGALDEEEE----TGQEQKIAWRHFEHALN 727

Query: 1023 HSYKELS 1029
              +K++S
Sbjct: 728  QVHKQIS 734



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 119/207 (57%), Gaps = 19/207 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L +   KG+LL+GPPG  KT   +  A ++G+N   V G E++S   GESE+AL E+
Sbjct: 512 MKRLNISGKKGILLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGESERALREI 571

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A  ++P+++F DE+DAIA  R +G  +    ++ TLLN MDG+     VLV+AATN+
Sbjct: 572 FRKARSASPSIIFFDEIDAIAARRNNGPSQGGINVLTTLLNEMDGIEELKNVLVVAATNK 631

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P+ ++PAL RPGRLD           ++L   P   P    R EIL    S  E   +D 
Sbjct: 632 PEVLDPALMRPGRLD-----------NILYVGP---PDLQARKEILKIWFSKSE---VDD 674

Query: 616 EVEY--LSMATHGFVGADLAALCNEAA 640
           EV+   L+  T G+ GA++ ++C  AA
Sbjct: 675 EVDIDRLAQVTDGYSGAEMVSICETAA 701



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 112/231 (48%), Gaps = 27/231 (11%)

Query: 413 LGGLSKEYAI----LKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           LGGL ++       L+D  I  + K T+ S   R + G+L++GP GTGK++L    A   
Sbjct: 207 LGGLGRQMTQINERLRDFTIQEN-KVTMPSF-YRNSGGILIYGPKGTGKSTLLSNLAAAG 264

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
              + T+N   V+++N G+ E  L + F  A QS P ++ ID+LD +AP        +S 
Sbjct: 265 WKKVLTINS-SVLNKNRGDGEVLLRKTFSEAVQSQPCLITIDQLDFLAPKNTSNDPSISS 323

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            +   L  + D       VLV A T  P+ ++  LR P R   EIE+             
Sbjct: 324 ALCEVLDTIQD-----TKVLVAACTRHPNDVDDGLRTPHRFGVEIEL------------- 365

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
             VP+   R EIL A + G      DS++  L+  THG+VGADL +L   A
Sbjct: 366 -PVPTAEGREEILLA-IRGTSAVPSDSQLAKLAERTHGYVGADLFSLLQLA 414



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 12/190 (6%)

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           GIL++GP G  K+ +   +A+ AG   +      + +K  G+ E  +R  F++A  + P 
Sbjct: 242 GILIYGPKGTGKSTLLSNLAA-AGWKKVLTINSSVLNKNRGDGEVLLRKTFSEAVQSQPC 300

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
           +I  D++D LA          + +D  +S  L E+    Q   V V A T  P+ +D  L
Sbjct: 301 LITIDQLDFLAPKN-------TSNDPSISSALCEVLDTIQDTKVLVAACTRHPNDVDDGL 353

Query: 931 LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD----ISL 986
             P RF   + +  P    REEI           SD  + +LA  + G  GAD    + L
Sbjct: 354 RTPHRFGVEIELPVPTAEGREEILLAIRGTSAVPSDSQLAKLAERTHGYVGADLFSLLQL 413

Query: 987 ICREAAISAI 996
            CR+A    I
Sbjct: 414 ACRKAQTRQI 423


>gi|345486620|ref|XP_001605497.2| PREDICTED: transitional endoplasmic reticulum ATPase TER94-like
            [Nasonia vitripennis]
          Length = 801

 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 125/262 (47%), Positives = 184/262 (70%), Gaps = 1/262 (0%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F+ A  K  PSA+RE I+EVP V WED+GG + VK +L E V++P +H + F
Sbjct: 442  SLAVSMDNFKYAMSKSSPSALRETIVEVPTVTWEDIGGLQNVKLELQELVQYPVEHPDKF 501

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 502  LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVF 561

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR+ AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 562  DKARSAAPCVLFFDELDSIAKSRGGSVGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 621

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE IF+ +LRK P + DV++  +A ++ G +
Sbjct: 622  NRPDIIDPAILRPGRLDQLIYIPLPDEKSRESIFKANLRKSPVAQDVDLTYIAKVTHGFS 681

Query: 981  GADISLICREAAISAIEENLDA 1002
            GADI+ IC+ A   AI + +++
Sbjct: 682  GADITEICQRACKLAIRQCIES 703



 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 109/230 (47%), Positives = 149/230 (64%), Gaps = 2/230 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P +H   FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 199  VGYDDIGGVRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 258

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K     
Sbjct: 259  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHG-- 316

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DG+ Q  +V V+AATNRP+ ID AL R GRFDR + +G P+ T R 
Sbjct: 317  EVERRIVSQLLTLMDGMKQSAHVIVMAATNRPNSIDGALRRFGRFDREIDIGIPDSTGRL 376

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
            EI RIH + +  + DV + E+A  + G  GAD++ +C EAA+  I E +D
Sbjct: 377  EILRIHTKNMKLAEDVELEEIAAETHGHVGADLASLCSEAALQQIREKMD 426



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 157/234 (67%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +K+++ +     S   ++G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 204 IGGVRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 263

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDELDAIAP R+    E+ +R+V
Sbjct: 264 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHGEVERRIV 323

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ ++  V+V+AATNRP+SI+ ALRR GR DREI+I               +
Sbjct: 324 SQLLTLMDGMKQSAHVIVMAATNRPNSIDGALRRFGRFDREIDI--------------GI 369

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEIL      M+ +  D E+E ++  THG VGADLA+LC+EAAL  +R
Sbjct: 370 PDSTGRLEILRIHTKNMKLA-EDVELEEIAAETHGHVGADLASLCSEAALQQIR 422



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 20/212 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G++P++GVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + +VFD 
Sbjct: 504 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDK 563

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A  +AP V+F DELD+IA +R     D G   + R++  +L  MDG+     V +I ATN
Sbjct: 564 ARSAAPCVLFFDELDSIAKSRGGSVGDAG-GAADRVINQILTEMDGMGAKKNVFIIGATN 622

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PA+ RPGRLD+ I I               +P    R  I  A L     +  D
Sbjct: 623 RPDIIDPAILRPGRLDQLIYI--------------PLPDEKSRESIFKANLRKSPVA-QD 667

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            ++ Y++  THGF GAD+  +C  A  + +R+
Sbjct: 668 VDLTYIAKVTHGFSGADITEICQRACKLAIRQ 699


>gi|407463915|ref|YP_006774797.1| ATPase AAA [Candidatus Nitrosopumilus sp. AR2]
 gi|407047103|gb|AFS81855.1| ATPase AAA [Candidatus Nitrosopumilus sp. AR2]
          Length = 728

 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 133/289 (46%), Positives = 194/289 (67%), Gaps = 20/289 (6%)

Query: 749  DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 808
            DF+KA ++V PS MREV +E P VKW+DVGG  +VK +L EAVEWP K+   + ++G   
Sbjct: 424  DFQKALIEVTPSGMREVFIENPDVKWDDVGGLEDVKRELQEAVEWPMKYPGLYDKLGHNM 483

Query: 809  PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 868
            P GIL+ GP G  KTL+A+AVA+++  NF++V+GPEL SKWVGESE+ +R +F +AR +A
Sbjct: 484  PRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFKRARQSA 543

Query: 869  PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
            P ++FFDEID +A IRG   +  +V++RV+SQLL ELDG+     V V+AATNR D IDP
Sbjct: 544  PCVVFFDEIDSIAPIRGAGGE-TAVTERVVSQLLTELDGMENMHGVIVLAATNRADMIDP 602

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD------VNIRELACLSEGCTGA 982
            ALLRPGRFD+++ +  P++  R+ I +I+  KIP  SD      ++  +L+ L++G +GA
Sbjct: 603  ALLRPGRFDKIIQIPLPDKESRKSILKINAEKIPTVSDEKDPQHIDFEKLSELTDGLSGA 662

Query: 983  DISLICREAAISAIEENLDA-------------SRITMQHLKTAIRHVQ 1018
            D + I   A    I E LD+             +++TM+H + A++ V+
Sbjct: 663  DTASIANTAVSLVIHEFLDSHPDVKDIEKSDVDAKVTMKHFEEAVKKVR 711



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/272 (42%), Positives = 170/272 (62%), Gaps = 17/272 (6%)

Query: 764  EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 823
            E +  VP+V +ED+GG      ++ E +E P +H E F+++G   P G+L++GPPG  KT
Sbjct: 166  ETLRGVPQVTYEDIGGISNEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKT 225

Query: 824  LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 883
            L+A+AVA+E+  +F+++ GPE+ SK+ GESE  +R +F +AR  APSIIF DEID +A  
Sbjct: 226  LLAKAVANESNAHFISISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPK 285

Query: 884  RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 943
            R +E  G  V  RV+SQ+L  +DGL  R  V VI+ATNRP+ IDPAL RPGRFDR + + 
Sbjct: 286  R-EEVTG-EVERRVVSQMLSLMDGLEARGKVIVISATNRPNAIDPALRRPGRFDREIEIK 343

Query: 944  PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------ 997
             P++  R++I  IH R +P S DVN+ +++ +S G  GAD+  +C+EAA+  +       
Sbjct: 344  VPDKKGRKDILAIHSRNMPLSDDVNMEKISSVSHGYVGADLEYLCKEAAMKCLRRLLPVL 403

Query: 998  ---------ENLDASRITMQHLKTAIRHVQPS 1020
                     E LD   +  +  + A+  V PS
Sbjct: 404  NLEEEKLPPETLDKLIVNHEDFQKALIEVTPS 435



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 151/235 (64%), Gaps = 16/235 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+S E   ++++I +          LG+   KGVLL+GPPGTGKT LA+  A++S  +
Sbjct: 179 IGGISNEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKTLLAKAVANESNAH 238

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
             +++GPE++S+ YGESE  L E+F  A + AP+++F+DE+D+IAP R++   E+ +R+V
Sbjct: 239 FISISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPKREEVTGEVERRVV 298

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + +L+LMDG+     V+VI+ATNRP++I+PALRRPGR DREIEI               V
Sbjct: 299 SQMLSLMDGLEARGKVIVISATNRPNAIDPALRRPGRFDREIEI--------------KV 344

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
           P    R +IL      M  S  D  +E +S  +HG+VGADL  LC EAA+ CLRR
Sbjct: 345 PDKKGRKDILAIHSRNMPLS-DDVNMEKISSVSHGYVGADLEYLCKEAAMKCLRR 398



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 154/290 (53%), Gaps = 32/290 (11%)

Query: 364 NAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQA--TVEQDISKLGGLSKEYA 421
           +  ++NHE   +    +      +RE  + N  +++ +V     V++++ +      +Y 
Sbjct: 416 DKLIVNHED--FQKALIEVTPSGMREVFIENPDVKWDDVGGLEDVKRELQEAVEWPMKYP 473

Query: 422 ILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVV 481
            L D             LG    +G+LLHGP GTGKT LA+  A  S  N  +V GPE++
Sbjct: 474 GLYD------------KLGHNMPRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELL 521

Query: 482 SQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE-LSQRMVATLLNLMDG 540
           S+  GESE+ + E+F  A QSAP VVF DE+D+IAP R  GGE  +++R+V+ LL  +DG
Sbjct: 522 SKWVGESERGIREIFKRARQSAPCVVFFDEIDSIAPIRGAGGETAVTERVVSQLLTELDG 581

Query: 541 VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEI---DMSFLFSLLKNSPAAVPSPAQR 597
           +    GV+V+AATNR D I+PAL RPGR D+ I+I   D     S+LK +   +P+ +  
Sbjct: 582 MENMHGVIVLAATNRADMIDPALLRPGRFDKIIQIPLPDKESRKSILKINAEKIPTVSDE 641

Query: 598 LEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 647
            +  H             + E LS  T G  GAD A++ N A  + +  +
Sbjct: 642 KDPQHI------------DFEKLSELTDGLSGADTASIANTAVSLVIHEF 679


>gi|389610937|dbj|BAM19079.1| spermatogenesis associated factor [Papilio polytes]
          Length = 476

 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 137/333 (41%), Positives = 209/333 (62%), Gaps = 17/333 (5%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F  A  K  PSA+RE ++EVP V W D+GG + VK +L E V++P +H + F
Sbjct: 113  SLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWSDIGGLQSVKRELQELVQYPVEHPDKF 172

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 173  LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIF 232

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR+ +P ++FFDE+D +A  RG   SD    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 233  DKARSASPCVLFFDELDSIAKSRGGSVSDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 292

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE I R +LRK P + DV++  +A +++G +
Sbjct: 293  NRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRSNLRKSPIAKDVDLSYIAKVTQGFS 352

Query: 981  GADISLICREAAISAIEENLDA----SRITMQHLKTAIRHVQ-----PSEIHSYKELSAK 1031
            GAD++ +C+ A   AI + ++A     R   Q    A+  +      P    ++ E + K
Sbjct: 353  GADLTEVCQRACKLAIRQAIEAEIQRERTRQQQTPAAVMDMDEEDPVPEISRAHFEEAMK 412

Query: 1032 FQRLVHSNAEADESGYQ-----LRPSKSIGSNM 1059
            F R   S ++ D   Y+     L+ S+  G+N 
Sbjct: 413  FAR--RSVSDNDIRKYEMFAQTLQQSRGFGTNF 443



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 159/323 (49%), Gaps = 53/323 (16%)

Query: 344 ADLTNERSQPQVTESMD------HESNAFVINH---ETKVYLYPPLNAVSKSLREGTLPN 394
           A L +E +  Q+ E MD       + +A V+N        + Y    +   +LRE     
Sbjct: 81  ASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETV--- 137

Query: 395 AQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPG 454
             +E  NV  +   DI  L  + +E   L    +    K      G++P++GVL +GPPG
Sbjct: 138 --VEVPNVTWS---DIGGLQSVKRELQELVQYPVEHPDK--FLKFGMQPSRGVLFYGPPG 190

Query: 455 TGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDA 514
            GKT LA+  A++   N  +V GPE+++  +GESE  + ++FD A  ++P V+F DELD+
Sbjct: 191 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDS 250

Query: 515 IAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLD 570
           IA +R     D G   + R++  +L  MDG+     V +I ATNRPD I+PA+ RPGRLD
Sbjct: 251 IAKSRGGSVSDAG-GAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLD 309

Query: 571 REIEIDM-------SFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA 623
           + I I +       + L S L+ SP A                       D ++ Y++  
Sbjct: 310 QLIYIPLPDEKSREAILRSNLRKSPIAK----------------------DVDLSYIAKV 347

Query: 624 THGFVGADLAALCNEAALVCLRR 646
           T GF GADL  +C  A  + +R+
Sbjct: 348 TQGFSGADLTEVCQRACKLAIRQ 370



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 65/97 (67%)

Query: 905  LDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS 964
            +DG+ +  +V V+AATNRP+ IDPAL R GRFDR + +G P+ T R EI RIH + +   
Sbjct: 1    MDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG 60

Query: 965  SDVNIRELACLSEGCTGADISLICREAAISAIEENLD 1001
             DV++ ++A  S G  GAD++ +C EAA+  I E +D
Sbjct: 61   DDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMD 97



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 21/128 (16%)

Query: 538 MDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQR 597
           MDG+ ++  V+V+AATNRP+SI+PALRR GR DREI+I               +P    R
Sbjct: 1   MDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI--------------GIPDATGR 46

Query: 598 LEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI------Q 651
           LEIL      M+    D ++E ++  +HG VGADLA+LC+EAAL  +R    +      Q
Sbjct: 47  LEILRIHTKNMKLG-DDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDQ 105

Query: 652 TSSDVLHS 659
             ++VL+S
Sbjct: 106 IDAEVLNS 113


>gi|357114004|ref|XP_003558791.1| PREDICTED: cell division control protein 48 homolog E-like
            [Brachypodium distachyon]
          Length = 811

 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 125/253 (49%), Positives = 175/253 (69%), Gaps = 1/253 (0%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F+ A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 460  FKTALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 519

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 520  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARGSAP 579

Query: 870  SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG    D    +DRV++QLL E+DG++ +  V +I ATNRPD IDP
Sbjct: 580  CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 639

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+   R +IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 640  ALLRPGRLDQLIYIPLPDVESRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEIC 699

Query: 989  REAAISAIEENLD 1001
            + A   AI EN++
Sbjct: 700  QRACKYAIRENIE 712



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 164/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL+FGPPG  KTL+ARAVA
Sbjct: 208  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLFGPPGSGKTLIARAVA 267

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAP+IIF DEID +A  R K ++G
Sbjct: 268  NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKREK-TNG 326

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 327  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 385

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV +  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 386  LEVLRIHTKNMKLAEDVELEHISKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETI 445

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  +T  H KTA+    PS + 
Sbjct: 446  DAEILNSMAVTNDHFKTALTTSNPSALR 473



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 107/239 (44%), Positives = 156/239 (65%), Gaps = 16/239 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL GPPG+GKT +AR  A+++G  
Sbjct: 214 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLFGPPGSGKTLIARAVANETGAF 273

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++APA++FIDE+D+IAP R+    E+ +R+V
Sbjct: 274 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKREKTNGEVERRIV 333

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 334 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 379

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI 650
           P    RLE+L      M+ +  D E+E++S  THG+VGADLAALC EAAL C+R    I
Sbjct: 380 PDEVGRLEVLRIHTKNMKLA-EDVELEHISKDTHGYVGADLAALCTEAALQCIREKMDI 437



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 117/214 (54%), Gaps = 20/214 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 511 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 570

Query: 496 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 551
           FD A  SAP V+F DELD+IA  R     D G   + R++  LL  MDG+     V +I 
Sbjct: 571 FDKARGSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 629

Query: 552 ATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHS 611
           ATNRPD I+PAL RPGRLD+ I I +              P    RL+I  A L     +
Sbjct: 630 ATNRPDIIDPALLRPGRLDQLIYIPL--------------PDVESRLQIFKACLRKSPVA 675

Query: 612 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
             D ++  L+  T GF GAD+  +C  A    +R
Sbjct: 676 -KDVDLNALAKYTQGFSGADITEICQRACKYAIR 708


>gi|225681355|gb|EEH19639.1| cell division cycle protein [Paracoccidioides brasiliensis Pb03]
          Length = 754

 Score =  270 bits (689), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 202/307 (65%), Gaps = 12/307 (3%)

Query: 725  NGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVK 784
            +G   SS  M   E    L++E +D   A  + RP+AMREV LE PKV+W D+GGQ ++K
Sbjct: 438  DGAVSSSDVMIPDEN--LLQIEDIDISLALQETRPTAMREVFLETPKVRWSDIGGQHKIK 495

Query: 785  TQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPE 844
             +L +AVE P K  +  KR+      GIL++GPPGCSKTL  +A+A+EAGLNFLAVKG E
Sbjct: 496  RRLQKAVERPLKFPDRMKRLNISGKKGILLYGPPGCSKTLTVKALATEAGLNFLAVKGAE 555

Query: 845  LFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLL 902
            + S +VGESE+A+R +F KAR+ +PSIIFFDEID +AA R  G    G++    V++ LL
Sbjct: 556  ILSMYVGESERALREIFRKARSASPSIIFFDEIDAIAARRSNGPSQGGIN----VLTTLL 611

Query: 903  VELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIP 962
             E+DG+ +  NV V+AATN+P+ +DPAL+RPGR D +LYVGPP+   R+EI +I   K  
Sbjct: 612  NEMDGIEELKNVLVVAATNKPEVLDPALMRPGRLDNILYVGPPDLQARKEILKIWFSKSE 671

Query: 963  CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEI 1022
               +V+I  LA +++G +GA++  IC  AA  A++E  +    T Q  K A RH + +  
Sbjct: 672  VDDEVDIDRLAQVTDGYSGAEMVSICETAADGALDEEEE----TGQEQKIAWRHFEHALN 727

Query: 1023 HSYKELS 1029
              +K++S
Sbjct: 728  QVHKQIS 734



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 119/207 (57%), Gaps = 19/207 (9%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
           +  L +   KG+LL+GPPG  KT   +  A ++G+N   V G E++S   GESE+AL E+
Sbjct: 512 MKRLNISGKKGILLYGPPGCSKTLTVKALATEAGLNFLAVKGAEILSMYVGESERALREI 571

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 555
           F  A  ++P+++F DE+DAIA  R +G  +    ++ TLLN MDG+     VLV+AATN+
Sbjct: 572 FRKARSASPSIIFFDEIDAIAARRSNGPSQGGINVLTTLLNEMDGIEELKNVLVVAATNK 631

Query: 556 PDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLDS 615
           P+ ++PAL RPGRLD           ++L   P   P    R EIL    S  E   +D 
Sbjct: 632 PEVLDPALMRPGRLD-----------NILYVGP---PDLQARKEILKIWFSKSE---VDD 674

Query: 616 EVEY--LSMATHGFVGADLAALCNEAA 640
           EV+   L+  T G+ GA++ ++C  AA
Sbjct: 675 EVDIDRLAQVTDGYSGAEMVSICETAA 701



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 112/231 (48%), Gaps = 27/231 (11%)

Query: 413 LGGLSKEYAI----LKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 468
           LGGL ++       L+D  I  + K T+ S   R + G+L++GP GTGK++L    A   
Sbjct: 207 LGGLGRQMTQINERLRDFTIQEN-KVTMPSF-YRNSGGILIYGPKGTGKSTLLSNLAAAG 264

Query: 469 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 528
              + T+N   V+++N G+ E  L + F  A QS P ++ ID+LD +AP        +S 
Sbjct: 265 WKKVLTINS-SVLNKNRGDGEVLLRKTFSEAVQSQPCLITIDQLDFLAPKNTSNDPSISS 323

Query: 529 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSP 588
            +   L  + D       VLV A T  P+ ++  LR P R   EIE+             
Sbjct: 324 ALCEVLDTIQD-----TKVLVAACTRHPNDVDDGLRTPHRFGVEIEL------------- 365

Query: 589 AAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEA 639
             VP+   R EIL A + G      DS++  L+  THG+VGADL +L   A
Sbjct: 366 -PVPTAEGREEILLA-IRGTSAVPSDSQLAKLAERTHGYVGADLFSLLQLA 414



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 12/190 (6%)

Query: 811 GILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 870
           GIL++GP G  K+ +   +A+ AG   +      + +K  G+ E  +R  F++A  + P 
Sbjct: 242 GILIYGPKGTGKSTLLSNLAA-AGWKKVLTINSSVLNKNRGDGEVLLRKTFSEAVQSQPC 300

Query: 871 IIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPAL 930
           +I  D++D LA          + +D  +S  L E+    Q   V V A T  P+ +D  L
Sbjct: 301 LITIDQLDFLAPKN-------TSNDPSISSALCEVLDTIQDTKVLVAACTRHPNDVDDGL 353

Query: 931 LRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD----ISL 986
             P RF   + +  P    REEI           SD  + +LA  + G  GAD    + L
Sbjct: 354 RTPHRFGVEIELPVPTAEGREEILLAIRGTSAVPSDSQLAKLAERTHGYVGADLFSLLQL 413

Query: 987 ICREAAISAI 996
            CR+A    I
Sbjct: 414 ACRKAQTRQI 423


>gi|148264882|ref|YP_001231588.1| ATPase AAA [Geobacter uraniireducens Rf4]
 gi|146398382|gb|ABQ27015.1| AAA family ATPase, CDC48 subfamily [Geobacter uraniireducens Rf4]
          Length = 701

 Score =  269 bits (688), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 128/276 (46%), Positives = 188/276 (68%), Gaps = 1/276 (0%)

Query: 743  LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 802
            L + + DF +A+ ++ P+AMRE  +++P V W++VGG + VK +L EAV WP  H + ++
Sbjct: 416  LNVTMEDFMRAQGEIEPTAMREFFVDIPNVTWDEVGGLQNVKKELNEAVVWPLVHADLYE 475

Query: 803  RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 862
                +PP GIL++GPPG  KTL+A+A+A+E+ +NF+++KGP L SK+VGESE+++R +F 
Sbjct: 476  FAKVKPPKGILLYGPPGTGKTLLAKALATESKVNFISIKGPALMSKYVGESERSIREVFK 535

Query: 863  KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 922
            +AR +AP I+FFDE+D +A  RG   D   VS+RV+SQLL E+DG  +   V ++ ATNR
Sbjct: 536  RARQSAPCILFFDEMDAIAPARGGGGDS-HVSERVISQLLTEIDGTEELKGVFILGATNR 594

Query: 923  PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 982
             D IDPALLRPGR D L+ + PP E  R EIF++H R  P   DV+++ +A  +EG  GA
Sbjct: 595  KDIIDPALLRPGRIDILVEIPPPGEDARLEIFKVHTRGKPLLKDVDLKSIAAETEGLVGA 654

Query: 983  DISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 1018
            DI  +CR+A I AI E ++      + LK +  H Q
Sbjct: 655  DIEFLCRKATIIAICEFVEKGADDPKTLKISAAHFQ 690



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/270 (42%), Positives = 165/270 (61%), Gaps = 17/270 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V +ED+GG  +   ++ E +E P +H + F+++G  PP G+L+ GPPG  KTL+ARAVA
Sbjct: 171  RVSYEDIGGLGKGIQKVREMIELPLRHPQIFEKLGIDPPKGLLLHGPPGTGKTLIARAVA 230

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E   +F +V GPE+  K+ GESE  +R+LF +AR NAPSIIF DEID +A  R  E   
Sbjct: 231  NETNASFYSVSGPEIIHKFYGESEAKLRNLFEEARKNAPSIIFLDEIDAIAPKR--EQVT 288

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  RV++QLL  +DGL +R  V VI ATN P+ +D AL RPGRFDR L +G P+   R
Sbjct: 289  GEVEKRVVAQLLALMDGLAERGQVIVIGATNIPNALDQALRRPGRFDRELEIGIPDVNGR 348

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE------------- 997
             EI  IH R +P + DVN+ +LA ++ G  GAD+  +CREAA+++I              
Sbjct: 349  MEILDIHTRGMPLTDDVNLLKLAQVTHGFVGADLEALCREAAMNSIRRIIPKIEFELEQI 408

Query: 998  --ENLDASRITMQHLKTAIRHVQPSEIHSY 1025
              E L    +TM+    A   ++P+ +  +
Sbjct: 409  PYELLQELNVTMEDFMRAQGEIEPTAMREF 438



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 149/237 (62%), Gaps = 20/237 (8%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GGL K    ++++I +          LG+ P KG+LLHGPPGTGKT +AR  A+++  +
Sbjct: 177 IGGLGKGIQKVREMIELPLRHPQIFEKLGIDPPKGLLLHGPPGTGKTLIARAVANETNAS 236

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            ++V+GPE++ + YGESE  L  +F+ A ++AP+++F+DE+DAIAP R+    E+ +R+V
Sbjct: 237 FYSVSGPEIIHKFYGESEAKLRNLFEEARKNAPSIIFLDEIDAIAPKREQVTGEVEKRVV 296

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           A LL LMDG+     V+VI ATN P++++ ALRRPGR DRE+EI               +
Sbjct: 297 AQLLALMDGLAERGQVIVIGATNIPNALDQALRRPGRFDRELEI--------------GI 342

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAALVCLRR 646
           P    R+EIL     GM    L  +V  L +A  THGFVGADL ALC EAA+  +RR
Sbjct: 343 PDVNGRMEILDIHTRGMP---LTDDVNLLKLAQVTHGFVGADLEALCREAAMNSIRR 396



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/256 (39%), Positives = 147/256 (57%), Gaps = 23/256 (8%)

Query: 393 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLG-LRPTKGVLLHG 451
           P A  EF      V  D  ++GGL      L + ++   V + L     ++P KG+LL+G
Sbjct: 432 PTAMREFFVDIPNVTWD--EVGGLQNVKKELNEAVVWPLVHADLYEFAKVKPPKGILLYG 489

Query: 452 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 511
           PPGTGKT LA+  A +S VN  ++ GP ++S+  GESE+++ EVF  A QSAP ++F DE
Sbjct: 490 PPGTGKTLLAKALATESKVNFISIKGPALMSKYVGESERSIREVFKRARQSAPCILFFDE 549

Query: 512 LDAIAPARKDGGE-ELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLD 570
           +DAIAPAR  GG+  +S+R+++ LL  +DG     GV ++ ATNR D I+PAL RPGR+D
Sbjct: 550 MDAIAPARGGGGDSHVSERVISQLLTEIDGTEELKGVFILGATNRKDIIDPALLRPGRID 609

Query: 571 REIEIDMSFLFSLLKNSPAAVPSPAQ--RLEILHALLSGMEHSLLDSEVEYLSMATHGFV 628
             +EI                P P +  RLEI      G +  L D +++ ++  T G V
Sbjct: 610 ILVEI----------------PPPGEDARLEIFKVHTRG-KPLLKDVDLKSIAAETEGLV 652

Query: 629 GADLAALCNEAALVCL 644
           GAD+  LC +A ++ +
Sbjct: 653 GADIEFLCRKATIIAI 668


>gi|307174120|gb|EFN64778.1| Transitional endoplasmic reticulum ATPase TER94 [Camponotus
            floridanus]
          Length = 801

 Score =  269 bits (688), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 200/322 (62%), Gaps = 29/322 (9%)

Query: 742  ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 801
            +L + + +F+ A  K  PSA+RE I+EVP V W+D+GG + VK +L E V++P +H + F
Sbjct: 442  SLAVTMENFKYAMTKSSPSALRETIVEVPTVTWDDIGGLQNVKMELQELVQYPVEHPDKF 501

Query: 802  KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 861
             + G +P  G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F
Sbjct: 502  LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVF 561

Query: 862  AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 920
             KAR+ AP ++FFDE+D +A  RG    D    +DRV++Q+L E+DG+  + NV +I AT
Sbjct: 562  DKARSAAPCVLFFDELDSIAKSRGGTVGDAGGAADRVINQILTEMDGMGAKKNVFIIGAT 621

Query: 921  NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 980
            NRPD IDPA+LRPGR D+L+Y+  P+E  RE IFR +LRK P + DV++  +A ++ G +
Sbjct: 622  NRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIFRANLRKSPVAKDVDLSYIAKVTHGFS 681

Query: 981  GADISLICREAAISAI------------------------EENLDASRITMQHLKTAIRH 1016
            GAD++ IC+ A   AI                        +E+     IT  H + A+R+
Sbjct: 682  GADLTEICQRACKLAIRQCIETEIRREKERASNPSASMDMDEDDPVPEITRAHFEEAMRY 741

Query: 1017 ----VQPSEIHSYKELSAKFQR 1034
                V  ++I  Y+  +   Q+
Sbjct: 742  ARRSVSDNDIRKYEMFAQTLQQ 763



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 154/243 (63%), Gaps = 2/243 (0%)

Query: 772  VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 831
            V ++D+GG R+   Q+ E VE P +H   FK IG +PP GIL++GPPG  KTL+ARAVA+
Sbjct: 199  VGYDDIGGVRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 258

Query: 832  EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 891
            E G  F  + GPE+ SK  GESE  +R  F +A  N+P+IIF DE+D +A  R K     
Sbjct: 259  ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHG-- 316

Query: 892  SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 951
             V  R++SQLL  +DG+ Q  +V V+AATNRP+ ID AL R GRFDR + +G P+ T R 
Sbjct: 317  EVERRIVSQLLTLMDGMKQSSHVIVMAATNRPNSIDGALRRFGRFDREIDIGIPDATGRL 376

Query: 952  EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLK 1011
            EI RIH + +  + DV++ E+A  + G  GAD++ +C EAA+  I E +D   +   H+ 
Sbjct: 377  EILRIHTKNMKLADDVDLEEIAAETHGHVGADLASLCSEAALQQIREKMDLIDLEDDHID 436

Query: 1012 TAI 1014
              +
Sbjct: 437  AEV 439



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 157/234 (67%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +K+++ +     S   ++G++P +G+LL+GPPGTGKT +AR  A+++G  
Sbjct: 204 IGGVRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 263

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A +++PA++FIDELDAIAP R+    E+ +R+V
Sbjct: 264 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKTHGEVERRIV 323

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+ ++  V+V+AATNRP+SI+ ALRR GR DREI+I               +
Sbjct: 324 SQLLTLMDGMKQSSHVIVMAATNRPNSIDGALRRFGRFDREIDI--------------GI 369

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLEIL      M+ +  D ++E ++  THG VGADLA+LC+EAAL  +R
Sbjct: 370 PDATGRLEILRIHTKNMKLA-DDVDLEEIAAETHGHVGADLASLCSEAALQQIR 422



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 20/212 (9%)

Query: 439 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 498
            G++P++GVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + +VFD 
Sbjct: 504 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVFDK 563

Query: 499 ASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 554
           A  +AP V+F DELD+IA +R     D G   + R++  +L  MDG+     V +I ATN
Sbjct: 564 ARSAAPCVLFFDELDSIAKSRGGTVGDAGGA-ADRVINQILTEMDGMGAKKNVFIIGATN 622

Query: 555 RPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSLLD 614
           RPD I+PA+ RPGRLD+ I I               +P    R  I  A L     +  D
Sbjct: 623 RPDIIDPAILRPGRLDQLIYI--------------PLPDEKSREAIFRANLRKSPVA-KD 667

Query: 615 SEVEYLSMATHGFVGADLAALCNEAALVCLRR 646
            ++ Y++  THGF GADL  +C  A  + +R+
Sbjct: 668 VDLSYIAKVTHGFSGADLTEICQRACKLAIRQ 699


>gi|11265361|pir||T48355 transitional endoplasmic reticulum ATPase - Arabidopsis thaliana
 gi|7378614|emb|CAB83290.1| transitional endoplasmic reticulum ATPase [Arabidopsis thaliana]
          Length = 843

 Score =  269 bits (687), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 143/324 (44%), Positives = 204/324 (62%), Gaps = 16/324 (4%)

Query: 750  FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 809
            F  A     PSA+RE ++EVP V WED+GG   VK +L E V++P +H E F++ G  P 
Sbjct: 488  FHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 547

Query: 810  TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 869
             G+L +GPPGC KTL+A+A+A+E   NF++VKGPEL + W GESE  VR +F KAR +AP
Sbjct: 548  KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 607

Query: 870  SIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 928
             ++FFDE+D +A  RG  + D    +DRV++QLL E+DG++ +  V +I ATNRPD ID 
Sbjct: 608  CVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDS 667

Query: 929  ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 988
            ALLRPGR D+L+Y+  P+E  R  IF+  LRK P + DV++  LA  ++G +GADI+ IC
Sbjct: 668  ALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEIC 727

Query: 989  REAAISAIEENLDAS----RITMQH---LKTAIRHVQPSEIH-SYKELSAKFQRLVHSNA 1040
            + A   AI EN++      R   Q+   ++  +   + SEI  ++ E S K+ R   S +
Sbjct: 728  QRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYAR--RSVS 785

Query: 1041 EADESGYQ-----LRPSKSIGSNM 1059
            +AD   YQ     L+ S+  GS  
Sbjct: 786  DADIRKYQAFAQTLQQSRGFGSEF 809



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/268 (43%), Positives = 166/268 (61%), Gaps = 17/268 (6%)

Query: 771  KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 830
            +V ++DVGG R+   Q+ E VE P +H + FK IG +PP GIL++GPPG  KTL+ARAVA
Sbjct: 236  EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 295

Query: 831  SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 890
            +E G  F  + GPE+ SK  GESE  +R  F +A  NAPSIIF DEID +A  R K ++G
Sbjct: 296  NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG 354

Query: 891  VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 950
              V  R++SQLL  +DGL  R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E  R
Sbjct: 355  -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 413

Query: 951  EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 1001
             E+ RIH + +  + DV++  ++  + G  GAD++ +C EAA+  I E +D         
Sbjct: 414  LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSI 473

Query: 1002 ------ASRITMQHLKTAIRHVQPSEIH 1023
                  +  ++ +H  TA+ +  PS + 
Sbjct: 474  DAEILNSMAVSNEHFHTALGNSNPSALR 501



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 155/234 (66%), Gaps = 16/234 (6%)

Query: 413 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 471
           +GG+ K+ A +++++ +         S+G++P KG+LL+GPPG+GKT +AR  A+++G  
Sbjct: 242 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 301

Query: 472 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 531
            F +NGPE++S+  GESE  L + F+ A ++AP+++FIDE+D+IAP R+    E+ +R+V
Sbjct: 302 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 361

Query: 532 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAV 591
           + LL LMDG+     V+V+ ATNRP+SI+PALRR GR DREI+I               V
Sbjct: 362 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI--------------GV 407

Query: 592 PSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
           P    RLE+L      M+ +  D ++E +S  THG+VGADLAALC EAAL C+R
Sbjct: 408 PDEIGRLEVLRIHTKNMKLA-EDVDLERISKDTHGYVGADLAALCTEAALQCIR 460



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 116/213 (54%), Gaps = 18/213 (8%)

Query: 436 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 495
               G+ P+KGVL +GPPG GKT LA+  A++   N  +V GPE+++  +GESE  + E+
Sbjct: 539 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 598

Query: 496 FDSASQSAPAVVFIDELDAIAPARKDGGEE---LSQRMVATLLNLMDGVCRTDGVLVIAA 552
           FD A QSAP V+F DELD+IA  R +   +    + R++  LL  MDG+     V +I A
Sbjct: 599 FDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGA 658

Query: 553 TNRPDSIEPALRRPGRLDREIEIDMSFLFSLLKNSPAAVPSPAQRLEILHALLSGMEHSL 612
           TNRPD I+ AL RPGRLD+ I I +              P    RL I  A L     + 
Sbjct: 659 TNRPDIIDSALLRPGRLDQLIYIPL--------------PDEDSRLNIFKACLRKSPVA- 703

Query: 613 LDSEVEYLSMATHGFVGADLAALCNEAALVCLR 645
            D +V  L+  T GF GAD+  +C  A    +R
Sbjct: 704 KDVDVTALAKYTQGFSGADITEICQRACKYAIR 736


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.130    0.369 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,944,724,072
Number of Sequences: 23463169
Number of extensions: 648321937
Number of successful extensions: 2267514
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 22413
Number of HSP's successfully gapped in prelim test: 6602
Number of HSP's that attempted gapping in prelim test: 2126188
Number of HSP's gapped (non-prelim): 71646
length of query: 1086
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 932
effective length of database: 8,745,867,341
effective search space: 8151148361812
effective search space used: 8151148361812
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.6 bits)