BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001398
(1085 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WP44|HASTY_ARATH Protein HASTY 1 OS=Arabidopsis thaliana GN=HST1 PE=1 SV=1
Length = 1202
Score = 1437 bits (3721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/1073 (66%), Positives = 865/1073 (80%), Gaps = 19/1073 (1%)
Query: 14 VRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLRGL 73
VRREG + WQE+F L SLS++GP+QAELV M LRWLPEDIT++N+DLEGDRRRLLLRGL
Sbjct: 121 VRREGPDRWQEIFTLLTSLSAQGPLQAELVLMTLRWLPEDITIYNDDLEGDRRRLLLRGL 180
Query: 74 TQSLPEILPLLYSLLERHFGAALSEVGRQQLDVAKQHAATVTATLNAINAYAEWAPLPDL 133
TQSLPEILPLLY+LLERHFGAA+SE G Q D+AKQHA V A LNAI AY EWAP+PDL
Sbjct: 181 TQSLPEILPLLYNLLERHFGAAMSEAGMQHFDLAKQHADVVIACLNAIVAYTEWAPVPDL 240
Query: 134 AKYGIIHGCGFLLSSPDFRLHACEFFKLVSPRKGPADASASEFESAMHDVFQILMKVSGE 193
A+YGI+ GC FLLSS DFRLHACE FKLV RK P+DAS +EF+SA+ ++FQIL S E
Sbjct: 241 ARYGILSGCSFLLSSSDFRLHACEVFKLVCSRKRPSDASTAEFDSAISNLFQILTNASRE 300
Query: 194 FLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHCIAREDTILSMYLQQMLGYFQHFK 253
FL RS +S+ ID+++++FA +CESM SLG++NL I+ + ++++YLQQMLG+FQHFK
Sbjct: 301 FLCRSSSSSSVIDDNDYDFAVCMCESMASLGSTNLQSISSDGGVMAVYLQQMLGFFQHFK 360
Query: 254 IALHFQSLLFWLALMRDLMSKTKVAHSTGDGSTVNNADSGSGKVDSRKMRILSFLNDDIS 313
+ LHF++LLFWL+LMRDL+ K K A G + D S +VDS K + LS +NDDIS
Sbjct: 361 LGLHFEALLFWLSLMRDLLPKPKAATYPSGGGSSTGGDDSSSQVDSEKKKTLSLINDDIS 420
Query: 314 GAILDISFQRLVKREKAPG----TQGPLELWSDDFEGKGDFSQYRSRLLELVKFVASNKP 369
AILD+SFQR++K+EK P + GPLELWSD+FEGKGDF YRS+LLEL+K AS+KP
Sbjct: 421 SAILDVSFQRMLKKEKVPTGIALSLGPLELWSDEFEGKGDFGPYRSKLLELIKLTASHKP 480
Query: 370 LVAGVKVSERVMAIINSLLISTMPAQDLAVMESMQSALENVVSAVFDGSNQFGGANSEVQ 429
L++ K+SERV+ +I LL S P Q +AVM+S Q AL+ +V+ +FDGSN+F G +SEV
Sbjct: 481 LISSTKISERVITLIKHLLASPAPLQHVAVMDSQQLALDCIVATLFDGSNEFAGGSSEVH 540
Query: 430 LSLSRIFEGLLRQLLSLKWTEPPLVVALGHYLDALGPFLKYYPDAVGGVISKLFELLTSL 489
+L IFEGLL+QLLSLKW EP L+ HYLDA+GPFLKY+PDAVG +I+KLFELLTSL
Sbjct: 541 YALRGIFEGLLQQLLSLKWNEPELMKVHVHYLDAMGPFLKYFPDAVGSLINKLFELLTSL 600
Query: 490 PFVFKDPSTNSARHARLQICTSFIRIAKTSDKSILPHMKDIADTMAYLQREGRLLRGEHN 549
P V KDP+T+++R ARLQICTSFIRIAK ++KS+LPHMK IADTM YL +EG LLRGEHN
Sbjct: 601 PHVVKDPATSTSRAARLQICTSFIRIAKAAEKSVLPHMKGIADTMGYLAKEGTLLRGEHN 660
Query: 550 LLGEAFLVMASAAGIQQQQEVLAWLLEPLSQQWMQLEWQNNYLSEPLGLVRLCSDTSFMW 609
+LGEAFLVMAS+AG QQQQEVLAWLLEPLSQQW+Q EWQNNYLS+P+GLVRLCS+TSFMW
Sbjct: 661 ILGEAFLVMASSAGAQQQQEVLAWLLEPLSQQWIQPEWQNNYLSDPMGLVRLCSNTSFMW 720
Query: 610 SLFHTVTFFERALKRSGIRKANLNLQSSSAENSAVMHPMASHLSWMLPPLLKLLRAIHSI 669
S++HTVTFFE+ALKRSG RK+NLN S++ S HPMA HLSWMLPPLLKLLR +HS+
Sbjct: 721 SIYHTVTFFEKALKRSGYRKSNLNTTSATTPAS---HPMAHHLSWMLPPLLKLLRVLHSL 777
Query: 670 WSPSISQLLPGEIKAAMTMSDAEQFSLLGEGNPKFSRGAVAFADGSQLDTSKEGYGEPNE 729
WSPS+ Q LP E++AAMTM+DAE++SLLGE NPK S+G +ADGS + +KEG E +E
Sbjct: 778 WSPSVFQTLPPEMRAAMTMTDAERYSLLGEANPKLSKGVSVYADGS-FEGTKEGQAEASE 836
Query: 730 SDIRNWLKGVRDSGYNVLGLSATIGDPFFKSLDSGSVVVALMENIQSMEFRHIRQLVHSV 789
SDIRNWLKG+RD GYNVLGLS TIG+ FFK LD+ V +ALMEN+QSMEFRHIR +H+
Sbjct: 837 SDIRNWLKGIRDCGYNVLGLSTTIGETFFKCLDANYVAMALMENLQSMEFRHIRLFIHTF 896
Query: 790 LIHMVKFCPLDMWEFWLEKLLNPLFIHCQQVLSSSWSSLMHE-----------VAGSDLK 838
+ ++VK CP DMWE WL LL+PLFIHCQQ LSS+W L+ E +GSD+K
Sbjct: 897 ITYIVKSCPADMWESWLGVLLHPLFIHCQQALSSAWPGLLQEGRAKVPDLFGIQSGSDMK 956
Query: 839 VEVMEEKLLRDLTREICSLLSTMASSGLNNGIPPIEQSGHFYRVDVLSLKDLDAFASNSM 898
+EVMEEKLLRDLTREI +L STMAS GLN G+P +E SGH RVD+ +L DL AF SNSM
Sbjct: 957 LEVMEEKLLRDLTREIATLFSTMASPGLNTGVPVLEHSGHVGRVDMSTLTDLHAFRSNSM 1016
Query: 899 VGFLLKHKDLALPALQISLEAFTWTDGEAVTKVSSFCSAVVLLAIQSNNIELRQFVSKDL 958
VGFLL HK +ALPALQI LE FTWTDGEA TKV FC VVLLA +NN+ELR+FVSKD+
Sbjct: 1017 VGFLLNHKSVALPALQICLETFTWTDGEATTKVCYFCGVVVLLAKLTNNVELREFVSKDM 1076
Query: 959 FSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDAL 1018
FSA+IRGL +ESNA+ S DLV +CREIFIY+ DRDPAPRQVLLSLPC+TP DL AFE+A
Sbjct: 1077 FSAVIRGLGMESNAINSPDLVNICREIFIYLSDRDPAPRQVLLSLPCLTPNDLHAFEEAT 1136
Query: 1019 TKTASPREQKQHMRSLLVLGTGNNLKALAAQKSVNVITNVSTRPRSSDNAPES 1071
KT+SP+EQKQ MRSLL+LGTGNNLKALAAQKS NVITNV+ R R +APE+
Sbjct: 1137 AKTSSPKEQKQLMRSLLLLGTGNNLKALAAQKSQNVITNVTARTRLPASAPET 1189
>sp|Q54PQ8|XPO5_DICDI Exportin-5 OS=Dictyostelium discoideum GN=xpo5 PE=3 SV=1
Length = 1135
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 242/1096 (22%), Positives = 446/1096 (40%), Gaps = 176/1096 (16%)
Query: 14 VRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRWLPEDITVH----NEDLEGDRRRLL 69
++R+ W L SL+ +S Q ELV LP DI ++ L RR+ L
Sbjct: 119 IKRDWPQRWMNLLTSLIEISKISDTQTELVLSTFGLLPHDIIFDTGSTSQVLSDQRRKDL 178
Query: 70 LRGLTQSLPEILPLLYSLLERHFG--AALSEVGRQQLDVAKQHAATVTATLNAINAYAEW 127
+ G+ ++ + Y LLE + + KQ + L + +Y EW
Sbjct: 179 MAGINLAVTSLFEYFYQLLESKYTQYKQPTPATTTTPQQTKQVIHLINVLLTTLRSYIEW 238
Query: 128 APLPDLAKYGIIH-GCGFLLSSPDFRLHACEFFKLVSPRKGPADASASEFESAMHDVFQI 186
P + + + C +L P FR+ ACE L RKG D ++ + +
Sbjct: 239 VPSKVIFDHKLDQIFCQLILDVP-FRMGACENLILFLGRKGRPDERIELIQTPFNFMENF 297
Query: 187 L--MKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHCIAREDTI---LSMY 241
L +K++ +F E ++ F + I +++ LGT +L+ + I ++Y
Sbjct: 298 LNSIKINSDF------------EDDYSFHKRITQALTILGTVHLNAYDDKHKIPNNYNIY 345
Query: 242 LQQMLGYFQHFKIALHFQSLLFWLALMRDLMSKTKVAHSTGDGSTVNNADSGSGKVDSRK 301
LQ ML H I L L FW + KV+S +
Sbjct: 346 LQLMLQMVSHPSILLSSFVLPFWHTFI---------------------------KVESLE 378
Query: 302 MRILSFLNDDISGAILDISFQRLVKREKAPGTQ--------GPLELWSDDFEGKGDFSQY 353
+ L + I +L + F R+ EK+ Q G + WS+ F G
Sbjct: 379 LSYLEEVIKQIMETML-VKFVRIGDPEKSDSEQSKYSEIDFGTSKEWSNFFGG------V 431
Query: 354 RSRLLELVKFVASNKPLVAGVKVSERVMAIINSLL----ISTMPAQDLAVMESMQSALEN 409
R+R L+++K + + +A + ++ +V ++++L ++++ + V+ES L++
Sbjct: 432 RTRYLDIIKLITIQRREMAYIFIATKVADVLDALKANLNVASLSHEQTLVLESHSHILDS 491
Query: 410 VVSAVFD---GSNQFGGANSEVQLSLSRIFEGLLRQLLSLKWTEPPLVVALGHYLDALGP 466
++ + D S+ F + Q ++ ++ + +L L + TEP + +D L
Sbjct: 492 ILLNIKDFTPESSLFFNKEQQQQPNIIQLTDRVLNLLFEINSTEPNIT---SFQIDCLQA 548
Query: 467 FLKYY---PDAVGGVISKLFELLTSLPFV-FKDPS---TNSARHARLQICTSFIRIAKTS 519
++ YY P+++ +++K+ L +PF +P+ NS H R + +S I I+
Sbjct: 549 YILYYQTNPESIKFLLNKIVPL---IPFPGLDNPNRSFQNSVLHTRRRAISSLIGISTNI 605
Query: 520 DKSILPHMKDIADTMAYLQREGRLLRGEHNLLGEAFLVMASA-AGIQQQQEVLAWLLEPL 578
+ P+ + ++ L ++ + E +L +V ++ QQ + +L P+
Sbjct: 606 SHLMKPYFDILYKSVVELFQKNVVTETEKVMLFHLLIVFSNNLPSYQQTLDFYKGILTPI 665
Query: 579 SQQWMQLEWQNNYLSEPLGLVRLCSDTSFMWSLFHTVTFFERALKRSGIRKANLNLQ--- 635
+QW+ LE + LS P ++ S S T R R I+ LQ
Sbjct: 666 IEQWVSLE-MSTALSSPDAFIQYLG-LSIADSQNLDATLVSR---RKNIQYVASTLQIFW 720
Query: 636 -------SSSAE------NSAVMH----PMASHLSWMLPPLLKLLRAIHSIWSPSISQLL 678
+SS E ++ + + P++S + +LP +L L R +H +W P +
Sbjct: 721 KKSQIPTNSSDELFAPFISNGISYNGKWPISSFVKQVLPGVLSLTRTLHQLWMPEHRAKI 780
Query: 679 PGEIKAAMTMSDAEQFSLLGEGNPKFSRGAVAFADGSQLDTSKEGYGE-PNESDIRNWLK 737
+ + D+ LLG + KE E N + +RN L
Sbjct: 781 HPSLSTIFNLDDSITAPLLG------------------FEYHKEQKSESSNVTFLRNILD 822
Query: 738 GVRDSGYNVLGLSATIGDPFFK-SLDSGSVVVALMENIQSMEFRHIRQLVHSVLIHMVKF 796
+RD+ Y ++G D F ++ ++ ++S+E RH++ LV +L +++K
Sbjct: 823 CLRDACYEIVGYGFNHSDELFSLPDLPLVLLDSVFSYLESIENRHLKLLVKHILNYLIKN 882
Query: 797 CPLDMWEFWLEKLLNPLFIHCQQVLSSSWSSLM---HEVAGSDLKVEVMEEKLLRDLTRE 853
CP + E +L LF + + W + + + K E++E+K+LRD++ E
Sbjct: 883 CPTKLEHTIFEPILPLLFSVLFNRIKAGWELIKLRSQKGEKENEKNEIVEDKILRDVSME 942
Query: 854 ICSLLSTMASSGLNNGIPPIEQSGHFYRVDVLSLKDLDAFASNSMVGFLLKHKDLALPAL 913
S + + N F +DV++ + S+ ++ + P L
Sbjct: 943 FLMCCSNIITQSPNYI---------FSSIDVMT--PMVYGISSCLMA-------MDTPIL 984
Query: 914 QISLEAFT--WTDGEAVTKVSSFCSAVVLLAIQSNNIELRQFVSKDLFSAIIRGLALESN 971
+ SL T D E V N+ + + + ++F I+ L +
Sbjct: 985 KKSLIVSTQLLVDHEKV-----------------NDPKFFKLIGSEMFGCCIKILIVNKF 1027
Query: 972 AVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTKTASPREQKQHM 1031
A S D+ + R I++ P+++LLSLP ITP L AF L T S + QK
Sbjct: 1028 AEFSNDIQSIIRLIYMKYYQICNYPQEILLSLPNITPPILQAFNKDLISTRSEKSQKVLF 1087
Query: 1032 RSLL--VLGTG-NNLK 1044
+ LL V+G N LK
Sbjct: 1088 KKLLQDVIGIPLNKLK 1103
>sp|Q9HAV4|XPO5_HUMAN Exportin-5 OS=Homo sapiens GN=XPO5 PE=1 SV=1
Length = 1204
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 237/1161 (20%), Positives = 460/1161 (39%), Gaps = 173/1161 (14%)
Query: 14 VRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLRGL 73
++RE W ++ L +LS +G Q ELV +L L ED+ V + L RRR + + L
Sbjct: 124 IKREWPQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDV-VTFQTLPPQRRRDIQQTL 182
Query: 74 TQSLPEILPLLYSLLERHFGAALS-EVGRQQLDVAKQHAATVTATLNAINAYAEWAPLPD 132
TQ++ I L + L+ + + Q A+ + A LN + Y +W +
Sbjct: 183 TQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSH 242
Query: 133 LAKYGIIHGCGFLLSSPDFRLH------ACEFFKLVSPRKGPADASASEF----ESAMHD 182
+ C L A E + RKG + + AMH
Sbjct: 243 ITA----ENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHY 298
Query: 183 VFQILMKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHCIAREDTI----- 237
+ G G + E + F + +C+ + +LG + + +
Sbjct: 299 ILSAAQTADG----------GGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSN 348
Query: 238 LSMYLQQMLGYFQHFKIALHFQSLLFWLALMRDLMSKTKVAHSTGDGSTVNNADSGSGKV 297
YL+ L + H L + + W AL R ++
Sbjct: 349 FGKYLESFLAFTTHPSQFLRSSTQMTWGALFRH-------------------------EI 383
Query: 298 DSRKMRILSFLNDDISGAILDISFQRLVKREKAPGTQGP-LELWSDDFEGKGDFSQY--- 353
SR +L+ I L S LVK T P E DF+ DF+ +
Sbjct: 384 LSRDPLLLA-----IIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNS 438
Query: 354 -RSRLLELVKFVASNKPLVAGVKVSERVMAIINSLL-----------------ISTMPAQ 395
R++ E+++ P + E + +++ L + ++ +
Sbjct: 439 SRAQQGEVMRLACRLDPKTSFQMAGEWLKYQLSTFLDAGSVNSCSAVGTGEGSLCSVFSP 498
Query: 396 DLAVMESMQSALENVVSAVFDGSNQFGGANSEVQLSLSRIFEG--LLRQLLSLKWTEPPL 453
E+M LE+V++ +F N+ E+ ++ +G LL+ +L+ +P +
Sbjct: 499 SFVQWEAMTLFLESVITQMFRTLNR-----EEIPVN-----DGIELLQMVLNFDTKDPLI 548
Query: 454 VVALGHYLDALGPFLKYYPDAVGGVISKLFELLTSLPFVF----KDPSTNSARHARLQIC 509
+ + + AL PF+ Y P+ + V SKLF +S+ F K P T + R+ R C
Sbjct: 549 LSCVLTNVSALFPFVTYRPEFLPQVFSKLF---SSVTFETVEESKAPRTRAVRNVRRHAC 605
Query: 510 TSFIRIAKTSDKSILPHMKDIADTMA-YLQREGRLLRGEHNLLGEAFLVMASAAGIQQQQ 568
+S I++ + + +LP+ + + + L E L + E L EA +++++ ++Q
Sbjct: 606 SSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNELLLTQMEKCALMEALVLISNQFKNYERQ 665
Query: 569 EV-LAWLLEPLSQQWMQLEWQ--------------------NNYLSEPLGLVRLCSDTSF 607
+V L L+ P++ W+ + + L +P GL R
Sbjct: 666 KVFLEELMAPVASIWLSQDMHRVLSDVDAFIAYVGTDQKSCDPGLEDPCGLNR----ARM 721
Query: 608 MWSLFHTVTFFERALKRSGIRKANLN---LQSSSAENSAVMHPMASHLSWMLPPLLKLLR 664
+ ++ + +R + + +A + +S+ N +P + +L LL L+R
Sbjct: 722 SFCVYSILGVVKRTCWPTDLEEAKAGGFVVGYTSSGNPIFRNPCTEQILKLLDNLLALIR 781
Query: 665 AIHSIWSPSISQLLPGEIKAAMTMSDAEQFSLLGEGNPKFSRGAVAFADGSQLDTSKEGY 724
+++++P + + A+ M DAE+ ++LG P + D T E
Sbjct: 782 THNTLYAPEMLAKMAEPFTKALDMLDAEKSAILGLPQP-----LLELNDSPVFKTVLE-- 834
Query: 725 GEPNESDIRNWLKGVRDSGYNVLGLSA-TIGDPFFKSLD-SGSVVVALMENIQSMEFRHI 782
++ + + ++ +++LG + ++ F+ D + ++ + N+ ++ +
Sbjct: 835 ------RMQRFFSTLYENCFHILGKAGPSMQQDFYTVEDLATQLLSSAFVNLNNIPDYRL 888
Query: 783 RQLVHSVLIHMVKFCPLDMWEFWLEKLLNPLFIHCQQVLSSSWSSLMHE--VAGSDLKV- 839
R ++ + +V FCP + +E + +L PLF + LS W + + G D
Sbjct: 889 RPMLRVFVKPLVLFCPPEHYEALVSPILGPLFTYLHMRLSQKWQVINQRSLLCGEDEAAD 948
Query: 840 ------EVMEEKLLRDLTREICSLLSTMASS---GLNNGIPPIEQSGHFYRVDVLSLKDL 890
E++EE+L+R LTRE+ L++ S ++ PP + ++
Sbjct: 949 ENPESQEMLEEQLVRMLTREVMDLITVCCVSKKGADHSSAPPADGDDEEMMATEVT---P 1005
Query: 891 DAFASNSMVG-FLLKHKDLALPALQISLEAFTWTDGEAVTKVSSFCSAVVLLAIQSNNIE 949
A A + +G L+KH+D+ L + + W D + + +S +L + S +
Sbjct: 1006 SAMAELTDLGKCLMKHEDVCTALLITAFNSLAWKDTLSCQRTTSQLCWPLLKQVLSGTL- 1064
Query: 950 LRQFVSKDLFSAIIRGLALE-SNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITP 1008
L V+ LF+++++GL + + A LV L +I+ + R R V+ +P I
Sbjct: 1065 LADAVTW-LFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRPRYLEIRAVMEQIPEIQK 1123
Query: 1009 QDLLAFE-----DALTKTASPREQKQHMRSLLVLGTGNNLKALAAQKSVNVITNVSTRPR 1063
L F+ +L K A R + Q R L+ G +K V+ I N+ + +
Sbjct: 1124 DSLDQFDCKLLNPSLQKVADKRRKDQFKR--LIAGCIGKPLGEQFRKEVH-IKNLPSLFK 1180
Query: 1064 SSDNAPESRTEEGESIGLAAI 1084
+ E+ + + GLA I
Sbjct: 1181 KTKPMLETEVLDNDGGGLATI 1201
>sp|Q924C1|XPO5_MOUSE Exportin-5 OS=Mus musculus GN=Xpo5 PE=2 SV=1
Length = 1204
Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 243/1150 (21%), Positives = 456/1150 (39%), Gaps = 151/1150 (13%)
Query: 14 VRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLRGL 73
++RE W ++ L +L +G Q ELV +L L ED+ V + L RRR + + L
Sbjct: 124 IKREWPQHWPDMLMELDTLFRQGETQRELVMFILLRLAEDV-VTFQTLPTQRRRDIQQTL 182
Query: 74 TQSLPEILPLLYSLLERHFGAALS-EVGRQQLDVAKQHAATVTATLNAINAYAEWAPLPD 132
TQ++ IL L + L+ + + Q A+ + A LN + Y +W L
Sbjct: 183 TQNMERILNFLLNTLQENVNKYQQMKTDSSQEAEAQANCRVSVAALNTLAGYIDWVSLNH 242
Query: 133 LA--KYGIIHGCGFLLSSPDFRLHACEFFKLVSPRKGPADASASEF----ESAMHDVFQI 186
+ ++ LL+ + +L A E + RKG + + AMH +
Sbjct: 243 ITAENCKLVETLCLLLNEQELQLGAAECLLIAVSRKGKLEDRKRLMILFGDVAMHYILSA 302
Query: 187 LMKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHCIAREDTI-----LSMY 241
G G + E + F + +C+ + +LG +A + I MY
Sbjct: 303 AQTADG----------GGLVEKHYLFLKRLCQVLCALGNLLCALLALDANIQTPINFGMY 352
Query: 242 LQQMLGYFQHFKIALHFQSLLFWLALMRDLMSKTKVAHSTGDGSTVNNADSGSGKVDSRK 301
L+ L + H L + + W AL R +V SR
Sbjct: 353 LESFLAFTTHPSQFLRSSTHMTWGALFRH-------------------------EVLSRD 387
Query: 302 MRILSFLNDDISGAILDISFQRLVKREKAPGTQGP-LELWSDDFEGKGDFSQY----RSR 356
+L+ + L S LVK T P E DF+ DF+ + R++
Sbjct: 388 PALLAVI-----PKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQ 442
Query: 357 LLELVKFVASNKPLVAGVKVSERVMAIINSLLISTMPAQDLAVM---------------- 400
E+V+ V P + +E + + S I T P +
Sbjct: 443 HGEVVRCVCRLDPKTSFQMAAEWLKYQL-SASIDTGPVNSCSTAGTGEGGFCSIFSPSYV 501
Query: 401 --ESMQSALENVVSAVFDGSNQFGGANSEVQLSLSRIFEGLLRQLLSLKWTEPPLVVALG 458
E+M LE+V++ +F ++ +L +S E LL+ +L+ + +P ++ +
Sbjct: 502 QWEAMTFFLESVINQMFRTLDK-------EELPVSDGIE-LLQLVLNFEIKDPLVLSCVL 553
Query: 459 HYLDALGPFLKYYPDAVGGVISKLFELLTSLPF-VFKDPSTNSARHARLQICTSFIRIAK 517
+ AL PF+ Y P + V SKLF +T K P T + R+ R C+S ++ +
Sbjct: 554 TNVSALFPFVTYKPAFLPQVFSKLFSFVTFESVGESKAPRTRAVRNVRRHACSSINKMCR 613
Query: 518 TSDKSILPHMKDI-ADTMAYLQREGRLLRGEHNLLGEAFLVMASA-AGIQQQQEVLAWLL 575
+LP+ + + L E L + E L EA +++++ ++Q+ L L+
Sbjct: 614 DYPDLVLPNFDMLYSHVKQLLSNELLLTQMEKCALMEALVLVSNQFKDYERQKLFLEELM 673
Query: 576 EPLSQQWM--------------------QLEWQNNYLSEPLGLVRLCSDTSFMWSLFHTV 615
P+ W+ L+ + + +P GL R + SF ++ +
Sbjct: 674 APVVNIWLSEEMCRALSDIDSFIAYVGADLKSCDPAVEDPCGLNR--ARMSF--CVYSIL 729
Query: 616 TFFERALKRSGIRKANLN---LQSSSAENSAVMHPMASHLSWMLPPLLKLLRAIHSIWSP 672
R S + +A + + + N +P + +L LL L+R +++++P
Sbjct: 730 GVMRRTSWPSDLEEAKAGGFVVGYTPSGNPIFRNPCTEQILRLLDNLLALVRTHNTLYTP 789
Query: 673 SISQLLPGEIKAAMTMSDAEQFSLLGEGNPKFSRGAVAFADGSQLDTSKEGYGEPNESDI 732
+ + A+ + ++E+ ++LG P + F D T+ E +
Sbjct: 790 EMLTKMAEPFTKALDIVESEKTAILGLPQP-----LLEFNDHPVYRTTLE--------RM 836
Query: 733 RNWLKGVRDSGYNVLGLSA-TIGDPFFKSLDSGSVVV-ALMENIQSMEFRHIRQLVHSVL 790
+ + + ++ Y++LG + ++ F+ D S ++ + N+ ++ +R ++ +
Sbjct: 837 QRFFGILYENCYHILGKAGPSMQQDFYTVEDLASQLLGSAFVNLNNIPDFRLRSMLRVFV 896
Query: 791 IHMVKFCPLDMWEFWLEKLLNPLFIHCQQVLSSSWSSLMHE--VAGSD-------LKVEV 841
+V FCP + +E + +L PLF + LS W + + G D E+
Sbjct: 897 KPLVLFCPSEHYETLISPILGPLFTYLHMRLSQKWHVINQRSILCGEDEIAEDNPESQEM 956
Query: 842 MEEKLLRDLTREICSL-LSTMASSGLNNGIPPIEQSGHFYRVDVLSLKDLDAFASNSMVG 900
+EE+L+R LTRE L ++ S + G + + +
Sbjct: 957 LEEQLVRMLTREAMDLIMACCVSKKTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGK 1016
Query: 901 FLLKHKDLALPALQISLEAFTWTDGEAVTKVSSFCSAVVLLAIQSNNIELRQFVSKDLFS 960
L+KH+D+ L + + TW D + + ++ +L + S + L V+ LF+
Sbjct: 1017 CLMKHEDVCTALLITAFNSLTWKDTLSCQRATTQLCWPLLKQVMSGTL-LADAVTW-LFT 1074
Query: 961 AIIRGLALE-SNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDAL- 1018
++++GL + + A LV L +I+ + R R V+ +P I + L F+ L
Sbjct: 1075 SVLKGLQMHGQHDGCMASLVHLAFQIYEALRPRYLEIRAVMEQIPEINKESLDQFDCKLL 1134
Query: 1019 ---TKTASPREQKQHMRSLLVLGTGNNLKALAAQKSVNV-ITNVSTRPRSSDNAPESRTE 1074
+ A+ + +K H + L+ G K L Q V I N+ + E+
Sbjct: 1135 NPSLQKAADKRRKDHFKRLIAGCIG---KPLGEQFRKEVHIKNLPWLFKKPKPMLETEVL 1191
Query: 1075 EGESIGLAAI 1084
+ E GLA I
Sbjct: 1192 DSEEGGLATI 1201
>sp|O14116|YKX1_SCHPO Uncharacterized protein C328.01c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC328.01c PE=4 SV=2
Length = 1234
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 215/1133 (18%), Positives = 402/1133 (35%), Gaps = 191/1133 (16%)
Query: 15 RREGINLWQELFPS-LVSLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLRG- 72
+R+ N W+E F S L SL S +L S++LR + ED+ +++ + R +L
Sbjct: 129 KRDWYNTWREEFDSFLQSLWSLSLQHRQLSSLILRGIMEDLYQYDDPVASLRSHILFNAL 188
Query: 73 ---------LTQSLPEILPLLYSLLERHFGAALSEVGRQQLDVAKQHAATVTATLNAINA 123
L + P LP ++ + G + + A + L +
Sbjct: 189 ISILSSSSTLHKLYPSGLPYSVTIPSNNEGWLI------RWGNALESQDDALECLKCFKS 242
Query: 124 YAEWAPLPDLAKYGII-HGCGFLLSSPDF-RLHACEFFKLVSPRKGPADASASEF----- 176
W + + I+ H C L+ P F + HA + + R D E
Sbjct: 243 CLSWVATDSIREANIVSHICQILVQGPIFLKTHAIDCIYICVTRTMEIDDPLWEIVEEML 302
Query: 177 -ESAMHDVFQILMKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHCIARED 235
S+++ + Q+ S ++ +S E+ + + E++V+LG N R
Sbjct: 303 SPSSLYTLHQVYTATSESINIKTLSSTTP----EYILLKKLSETIVALGQYNYLDSNRRK 358
Query: 236 TI----LSMYLQQMLGYFQHFKIALHFQSLLFWLALMRD-LMSKTKVAHSTGDGSTVNNA 290
I L Y +L +H + + S FW+ +RD ++SK +
Sbjct: 359 CIKLTSLDTYSLLVLEIMKHPSLLISAISQHFWVLALRDPIISKHE-------------- 404
Query: 291 DSGSGKVDSRKMRILSFLNDDISGAILDISFQRLVKREKAPGTQGP----LELWSDDFEG 346
K +I + +L I+ +RL++ E A P + +D EG
Sbjct: 405 ----------KFQI-------VYPELLSIASERLLRFEDAVVELIPESATAKYLQEDVEG 447
Query: 347 KGDF----SQYRSRLLELVKFVASNKPLVAGVKVSERVMAIINSLLISTMPAQDLAVMES 402
+R + ++V+ S P+ + + R + + L ME
Sbjct: 448 VSAVHSFCGNFRRFMFDIVRLTVSITPIESLNWIQNRFQSTV------------LGNMED 495
Query: 403 MQSALE----------------NVVSAVFDGSNQFGGANSEVQLSLSRIFEGLL---RQL 443
+QS E + + A G ++ S+ + I + L +QL
Sbjct: 496 IQSQTEFFSKTSPLYLTMDVGFSTIEAFLHGVTRWNENTSDDPATYEIILQNLFLWCKQL 555
Query: 444 LSLKWTEPPLVVALGHYLDALGPFL-KYYPDAVGGVISKLFELLT----SLPFVFKDPST 498
+ + + +P L+ L L L + +G V+ K+ +T S + F D
Sbjct: 556 VEINFKDPMLITRLISVLVLFTSILARENTTLLGVVLEKIISAVTYDNTSASYGFSD--V 613
Query: 499 NSARHARLQICTSFIRIAKTSDKSILPHMKDIADTMAYLQREGRLLRGEHNLLGEAFLVM 558
R + C +R+ + ++ + + L L E +L V+
Sbjct: 614 QKINEMRSRCCFELVRLGELMPNPLMNIFDQLQSIIDQLDNATTLTGSEIVMLKTFLFVI 673
Query: 559 A--SAAGIQQQQEVLAWLLEPLSQQWMQLEWQNNYLSEPL---GLVRLCSDTSFMWSLFH 613
S I+ + E L+ P+ + W+ ++ N E L G ++ S +
Sbjct: 674 TQFSDVNIEVKNEYFEKLVGPVVKTWLDVQPPVNSPMEFLNHIGFPQMAEYLSAKYPYNA 733
Query: 614 TVTFFE----RALKRSGIRKAN--------LNLQSSSAENSAVMHPMASH---------L 652
T FE A +S + L + ++ +HP L
Sbjct: 734 DYTQFELDADAASYQSNLETGRKWLWPIKCLGRFCEATCSNKHIHPSEFEGQKNLWQVIL 793
Query: 653 SWMLPPLLKLLRAIHSIWSPSISQLLPGEIKAAMTMSDAEQFSLLGEGNPKFSRGAVAFA 712
++P LLKL+ +H + PS L + + S E+F L G + S+
Sbjct: 794 PNVVPNLLKLVEQLHCCYEPSFISGLGMHNSSILQKSIVERFWL--HGVSQISKNQF-LE 850
Query: 713 DGSQLDTSKEGYGEPNESDIRNWLKGVRDSGYNVLGLSATIGDPFFKSLD-SGSVVVALM 771
+ ++D S ++L+ +R+ Y + +G FF S + A
Sbjct: 851 ESYKMDVSANKLIH----SFGHFLRRLREYCYYAIASFMRLGQAFFCVPGLSKQFLTAFF 906
Query: 772 ENIQSMEFRHIRQLVHSVLIHMVKFCPLDMWEFWLEKLLNPLFIHCQQVLSSSWSS---- 827
+ + +V+ V+ CP ++ + L LL L L S W
Sbjct: 907 SHAAGLSLHQWTSMVNVVIKPYCVNCPAELRDECLLPLLPALLSELDHKLVSEWRRINDR 966
Query: 828 --LMHEVA-----GSDLKVEVMEEKLLRDLTREICSLLSTMASSGLNNGIPPIEQSGHFY 880
L+ E A DL E++EE LLR LT L++ I P + +
Sbjct: 967 GLLVEEDAEETGEDDDLSEEMIEESLLRHLTYATAKLITETFLQ-----ITPTQSRSN-- 1019
Query: 881 RVDVLSLKDLDAFASNSMVG------------FLLKHKDLALPALQISLEAFTWTDGEAV 928
S+S++G ++L + + P L D V
Sbjct: 1020 -------------VSSSLIGKETVEGPVKLSEYVLDNAIICEPLLCTLCHLLVIHDSRTV 1066
Query: 929 -TKVSSFCSAVVLLAIQSNNIELRQFVSKDLFSAIIRGLALESNAVISADLVGLCREIFI 987
V++F + LL + + +R+F+ + +F ++I + + +D + L I
Sbjct: 1067 GLVVNAFLAITPLLVSEQAHSLVREFICQQVFQSVILAIHDPYFESMQSDFIRLACIILS 1126
Query: 988 YMCDRDPAPRQVLLSLPCITPQDLL--AFEDALTKTASPREQKQHMRSLLVLG 1038
Y + Q+L S+P + Q+ L AF + + ++ + QK + LL G
Sbjct: 1127 YSQGITDSAFQLLASIPALANQENLVPAFFNKFREASTLKIQKALLTRLLNSG 1179
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 87 LLERHFGAALSEVGRQQLDVAKQHAATVTATLNAINAYAEWAPLPDLAKYGIIHGC 142
LL R GA++ + R DVA+ A + N + PDL YGI+ GC
Sbjct: 41 LLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGC 96
>sp|Q6C715|XPOT_YARLI Exportin-T OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=LOS1
PE=3 SV=1
Length = 1025
Score = 35.0 bits (79), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 114 VTATLNAINAYAEWAPLPDLAKYGIIHGCGFLLSSPDFRLHACEFFKLVSPRKGPADASA 173
V L I + WA L +A+ + LLSSP R+HAC+ + +K +A
Sbjct: 227 VNNALRVIGGWVSWAELTLIAEPEALEAIFNLLSSPKSRIHACDCLSEIVAKKMYPNAK- 285
Query: 174 SEFESAMHDVFQILMKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHCIAR 233
FQ++ ++ + + + + I EF E + + S+G+ +H +
Sbjct: 286 ----------FQLIQSLNLTSIIHTLSQSADI-----EFDERVAKLANSIGSELIHIVET 330
Query: 234 E 234
E
Sbjct: 331 E 331
>sp|P30822|XPO1_YEAST Exportin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CRM1 PE=1 SV=1
Length = 1084
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 87/212 (41%), Gaps = 26/212 (12%)
Query: 5 KSDSCPCRRVRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGD 64
KSD + +++E W E P L+ SS E ++L+ L E++ + +
Sbjct: 117 KSDLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQ 176
Query: 65 RRRLLLRG-LTQSLPEILPLLYSLLERHFGAALSEVGRQQLDVAKQHAATVTATLNAINA 123
+ L L+ +++ +I L + +LE+ ++L + ATL ++
Sbjct: 177 AKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSL-----------------IVATLESLLR 219
Query: 124 YAEWAPLPDLAKYGIIHGCGF-LLSSPDFRLHACEFFKLVSPRKGPADASASE------F 176
Y W P + + I+ ++SPD R + VS K P D + F
Sbjct: 220 YLHWIPYRYIYETNILELLSTKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFF 279
Query: 177 ESAMHDVFQILMKVSGEFLYRSGTSAGAIDES 208
++ + + +M V+ + L + +A D+S
Sbjct: 280 QNTLQQIATSVMPVTAD-LKATYANANGNDQS 310
>sp|Q0VNJ1|MUTS_ALCBS DNA mismatch repair protein MutS OS=Alcanivorax borkumensis (strain
SK2 / ATCC 700651 / DSM 11573) GN=mutS PE=3 SV=1
Length = 859
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 53/247 (21%)
Query: 353 YRSRLLELVKFVAS----NKPLVAGVKVSERVMAIINSLLISTMPAQDLAVMESMQSALE 408
Y +RL++L + VA P +A V +V+ I+ +S D A++E + +
Sbjct: 77 YLARLVKLGESVAIAEQIGDPALAKGPVERKVVRIVTPGTVS-----DEALLEERR---D 128
Query: 409 NVVSAVFDGSNQFGGANSEVQLSLSRIF----EGLLR-QLLSLKWTEPPLVVALGHYL-- 461
N++ AVFD +NQ+G A+ + L+ R EG + Q L +W+ L+++ H L
Sbjct: 129 NLLCAVFDHNNQYGCAS--LDLAAGRFLVTQVEGAEQLQALLERWSPAELLISEEHGLPG 186
Query: 462 ---DALG----PFLKYYPDAVGGVISKLFELLTSLPFVFKDPSTNSARHARLQICTSFIR 514
D G P ++ DA + + F++ F P SA + +
Sbjct: 187 RWSDRPGTRKRPSWEFDEDAARRQLCQQFQVQDLAGFGEPSPVAVSA-------AGALLG 239
Query: 515 IAKTSDKSILPHMKDIA-----DTMAYLQREGRLLRGEHNLLGEAFLVMASAAGIQQQQE 569
AK + + LPH+ + D +A R L L G Q+Q
Sbjct: 240 YAKETQRGELPHITGLTVESFDDAVAMDAATRRNLELTETLDG-------------QEQH 286
Query: 570 VLAWLLE 576
LAW+L+
Sbjct: 287 TLAWVLD 293
>sp|A0LJ24|COBQ_SYNFM Cobyric acid synthase OS=Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB) GN=cobQ PE=3 SV=1
Length = 514
Score = 33.5 bits (75), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 508 ICTSFIRIAKTSDKSILPHMKDIADTMAYLQREGRLLRGEHNLLGEAFLVMASAAGIQQQ 567
+ +F RI K S+ P +Y+ EG GE +G A +V A AAGI+
Sbjct: 22 LAAAFCRILKQDGYSVAPFKAQNMALNSYITPEG----GE---MGRAQVVQAEAAGIEPH 74
Query: 568 QEVLAWLLEPLSQQWMQL 585
++ LL+P SQ Q+
Sbjct: 75 VDMNPVLLKPTSQMGSQV 92
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 380,398,294
Number of Sequences: 539616
Number of extensions: 15369351
Number of successful extensions: 39029
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 38992
Number of HSP's gapped (non-prelim): 21
length of query: 1085
length of database: 191,569,459
effective HSP length: 128
effective length of query: 957
effective length of database: 122,498,611
effective search space: 117231170727
effective search space used: 117231170727
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)