Query 001400
Match_columns 1085
No_of_seqs 723 out of 5074
Neff 8.0
Searched_HMMs 46136
Date Thu Mar 28 23:52:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001400.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001400hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 2E-191 3E-196 1723.0 70.3 1005 19-1077 12-1039(1391)
2 PLN03140 ABC transporter G fam 100.0 6E-176 1E-180 1702.8 106.4 1072 6-1077 24-1128(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 2E-136 4E-141 1340.8 99.7 955 77-1077 3-1010(1394)
4 KOG0061 Transporter, ABC super 100.0 1.7E-82 3.7E-87 768.6 57.3 585 97-758 21-608 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 1.6E-81 3.5E-86 769.9 59.0 569 145-757 35-612 (617)
6 PLN03211 ABC transporter G-25; 100.0 1.2E-80 2.6E-85 760.6 62.9 607 97-758 35-658 (659)
7 PLN03140 ABC transporter G fam 100.0 4.6E-79 1E-83 795.4 62.8 597 95-759 861-1467(1470)
8 KOG0055 Multidrug/pheromone ex 100.0 4.9E-75 1.1E-79 709.4 59.0 782 143-1054 361-1208(1228)
9 KOG0065 Pleiotropic drug resis 100.0 4.8E-77 1E-81 724.4 34.5 559 146-757 802-1382(1391)
10 KOG0054 Multidrug resistance-a 100.0 2.4E-73 5.2E-78 711.8 57.7 757 147-1056 533-1359(1381)
11 TIGR00956 3a01205 Pleiotropic 100.0 3E-73 6.5E-78 745.0 60.8 559 147-757 775-1389(1394)
12 TIGR01257 rim_protein retinal- 100.0 4.1E-71 8.9E-76 719.8 70.5 201 842-1054 1952-2154(2272)
13 PLN03130 ABC transporter C fam 100.0 2.6E-68 5.5E-73 705.0 60.3 211 816-1055 1237-1457(1622)
14 COG1123 ATPase components of v 100.0 1.8E-68 3.9E-73 613.1 49.1 475 148-1055 22-515 (539)
15 PLN03232 ABC transporter C fam 100.0 1.1E-67 2.4E-72 699.8 57.9 211 816-1055 1234-1454(1495)
16 PTZ00265 multidrug resistance 100.0 6.2E-65 1.4E-69 666.7 68.1 216 816-1054 1165-1447(1466)
17 TIGR00957 MRP_assoc_pro multi 100.0 3.4E-66 7.3E-71 686.5 56.0 211 816-1055 1284-1504(1522)
18 PRK13549 xylose transporter AT 100.0 3.3E-66 7.1E-71 624.0 48.1 469 148-1065 18-501 (506)
19 PRK10261 glutathione transport 100.0 2E-65 4.4E-70 628.4 50.7 488 148-1055 29-549 (623)
20 PRK10762 D-ribose transporter 100.0 2.5E-65 5.3E-70 615.6 49.4 451 148-1057 17-482 (501)
21 PRK09700 D-allose transporter 100.0 1.9E-65 4.1E-70 618.4 47.6 458 148-1054 18-493 (510)
22 PRK15134 microcin C ABC transp 100.0 8.2E-65 1.8E-69 615.1 50.0 463 148-1054 22-510 (529)
23 PRK15439 autoinducer 2 ABC tra 100.0 1.4E-64 3E-69 609.4 48.4 454 148-1056 24-489 (510)
24 TIGR02633 xylG D-xylose ABC tr 100.0 1.8E-64 3.9E-69 608.8 48.7 460 148-1055 14-488 (500)
25 TIGR03269 met_CoM_red_A2 methy 100.0 2.3E-64 4.9E-69 610.4 47.8 200 842-1054 297-512 (520)
26 PRK11288 araG L-arabinose tran 100.0 2.6E-64 5.6E-69 606.8 47.7 453 148-1058 17-484 (501)
27 TIGR01271 CFTR_protein cystic 100.0 4.2E-63 9.1E-68 654.9 62.0 209 816-1054 1217-1435(1490)
28 PTZ00243 ABC transporter; Prov 100.0 2.2E-63 4.7E-68 657.5 59.1 211 816-1055 1308-1529(1560)
29 PRK10982 galactose/methyl gala 100.0 2.8E-63 6.1E-68 596.7 47.2 451 148-1056 11-477 (491)
30 COG4172 ABC-type uncharacteriz 100.0 1.1E-61 2.3E-66 521.9 44.3 472 146-1055 21-512 (534)
31 PRK10938 putative molybdenum t 100.0 6E-62 1.3E-66 585.5 42.8 446 149-1051 17-484 (490)
32 PRK11819 putative ABC transpor 100.0 7.1E-60 1.5E-64 573.8 50.2 191 840-1054 335-528 (556)
33 PRK15064 ABC transporter ATP-b 100.0 1.7E-59 3.7E-64 568.7 49.7 188 839-1054 329-520 (530)
34 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.6E-59 7.7E-64 567.7 50.4 191 840-1054 333-526 (552)
35 PRK10636 putative ABC transpor 100.0 6.8E-57 1.5E-61 553.2 51.1 187 839-1054 322-512 (638)
36 PRK13409 putative ATPase RIL; 100.0 1.1E-57 2.4E-62 551.7 41.4 200 844-1072 354-557 (590)
37 PRK11147 ABC transporter ATPas 100.0 1E-56 2.3E-61 553.2 47.2 192 839-1054 329-523 (635)
38 COG1129 MglA ABC-type sugar tr 100.0 2E-56 4.3E-61 510.7 43.5 454 146-1055 19-486 (500)
39 COG0488 Uup ATPase components 100.0 5E-54 1.1E-58 505.5 42.4 219 147-395 15-238 (530)
40 PLN03073 ABC transporter F fam 100.0 2.8E-53 6E-58 521.8 50.1 185 842-1053 522-708 (718)
41 COG3845 ABC-type uncharacteriz 100.0 3.2E-51 6.9E-56 456.8 40.8 458 147-1056 16-489 (501)
42 COG1126 GlnQ ABC-type polar am 100.0 6.1E-47 1.3E-51 380.7 21.8 214 831-1055 4-221 (240)
43 KOG0927 Predicted transporter 100.0 6.4E-45 1.4E-49 406.7 30.1 204 814-1055 387-592 (614)
44 KOG0061 Transporter, ABC super 100.0 6.4E-45 1.4E-49 441.1 25.8 248 813-1075 22-270 (613)
45 COG1126 GlnQ ABC-type polar am 100.0 3.5E-44 7.7E-49 360.8 19.6 221 147-418 14-238 (240)
46 COG1135 AbcC ABC-type metal io 100.0 1.1E-43 2.4E-48 374.9 19.1 204 841-1056 18-228 (339)
47 COG1120 FepC ABC-type cobalami 100.0 2.6E-43 5.7E-48 374.5 21.8 226 832-1066 5-237 (258)
48 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.9E-43 1.7E-47 368.6 23.5 221 836-1066 11-236 (254)
49 COG1127 Ttg2A ABC-type transpo 100.0 4.5E-43 9.8E-48 358.3 20.4 232 830-1072 9-252 (263)
50 COG1125 OpuBA ABC-type proline 100.0 1.2E-42 2.7E-47 355.7 19.3 210 147-397 13-225 (309)
51 COG1135 AbcC ABC-type metal io 100.0 1.8E-42 3.9E-47 365.8 21.0 224 146-420 17-246 (339)
52 COG1116 TauB ABC-type nitrate/ 100.0 1.9E-42 4.2E-47 360.1 20.8 201 835-1048 9-211 (248)
53 COG1125 OpuBA ABC-type proline 100.0 1.5E-42 3.3E-47 355.1 19.4 213 832-1056 4-222 (309)
54 PLN03211 ABC transporter G-25; 100.0 1.1E-41 2.3E-46 417.6 29.7 252 814-1072 37-304 (659)
55 COG3638 ABC-type phosphate/pho 100.0 1.4E-42 3E-47 353.8 17.8 219 831-1058 5-236 (258)
56 COG1131 CcmA ABC-type multidru 100.0 1.1E-41 2.3E-46 379.1 23.8 219 833-1067 8-230 (293)
57 COG1118 CysA ABC-type sulfate/ 100.0 3.5E-42 7.7E-47 362.4 18.6 214 833-1056 6-224 (345)
58 COG3839 MalK ABC-type sugar tr 100.0 4.5E-42 9.7E-47 378.8 20.2 217 150-417 18-235 (338)
59 COG3842 PotA ABC-type spermidi 100.0 6.7E-42 1.5E-46 379.4 20.7 223 147-419 17-240 (352)
60 COG1118 CysA ABC-type sulfate/ 100.0 7.3E-42 1.6E-46 360.0 18.9 222 147-417 14-239 (345)
61 COG1136 SalX ABC-type antimicr 100.0 1.9E-41 4.1E-46 353.3 21.8 193 842-1046 18-219 (226)
62 COG1131 CcmA ABC-type multidru 100.0 3.1E-41 6.7E-46 375.4 22.7 212 147-401 17-230 (293)
63 COG1117 PstB ABC-type phosphat 100.0 1.3E-41 2.8E-46 340.2 17.1 214 834-1056 12-234 (253)
64 COG1120 FepC ABC-type cobalami 100.0 3E-41 6.5E-46 358.8 20.2 211 147-396 14-227 (258)
65 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.3E-41 2E-45 352.9 22.9 206 149-396 18-226 (254)
66 COG4555 NatA ABC-type Na+ tran 100.0 1.7E-41 3.6E-46 336.0 15.6 207 838-1056 10-219 (245)
67 COG1127 Ttg2A ABC-type transpo 100.0 8.4E-41 1.8E-45 341.7 20.9 211 146-397 19-235 (263)
68 COG1116 TauB ABC-type nitrate/ 100.0 5.3E-41 1.1E-45 349.3 19.5 194 148-386 16-211 (248)
69 COG3839 MalK ABC-type sugar tr 100.0 4.8E-41 1E-45 370.7 19.9 214 831-1056 5-220 (338)
70 COG4555 NatA ABC-type Na+ tran 100.0 6.8E-41 1.5E-45 331.6 17.0 207 147-397 14-222 (245)
71 TIGR00955 3a01204 The Eye Pigm 100.0 2.6E-40 5.6E-45 406.0 26.0 227 840-1072 36-264 (617)
72 COG3842 PotA ABC-type spermidi 100.0 6.1E-41 1.3E-45 371.8 18.2 215 831-1056 7-223 (352)
73 COG2884 FtsE Predicted ATPase 100.0 2.5E-40 5.4E-45 325.2 19.3 201 842-1054 15-221 (223)
74 COG3638 ABC-type phosphate/pho 100.0 3.5E-40 7.6E-45 336.2 20.3 216 147-397 16-237 (258)
75 COG1117 PstB ABC-type phosphat 100.0 2.6E-40 5.7E-45 330.8 17.0 221 148-416 20-248 (253)
76 PRK13537 nodulation ABC transp 100.0 1.9E-39 4.1E-44 364.7 24.6 209 835-1055 13-223 (306)
77 COG1137 YhbG ABC-type (unclass 100.0 2.8E-40 6E-45 326.9 15.0 215 832-1056 7-225 (243)
78 COG1136 SalX ABC-type antimicr 100.0 1.8E-39 3.8E-44 338.6 21.3 196 147-386 17-220 (226)
79 TIGR02314 ABC_MetN D-methionin 100.0 8.6E-39 1.9E-43 361.9 25.7 206 148-396 18-229 (343)
80 TIGR02314 ABC_MetN D-methionin 100.0 7.4E-39 1.6E-43 362.5 24.6 202 842-1055 18-226 (343)
81 KOG0062 ATPase component of AB 100.0 5.7E-39 1.2E-43 357.2 22.7 186 843-1053 378-563 (582)
82 COG0411 LivG ABC-type branched 100.0 4.5E-39 9.9E-44 331.5 19.5 225 831-1064 6-246 (250)
83 COG1124 DppF ABC-type dipeptid 100.0 3.5E-39 7.6E-44 331.9 18.6 200 843-1056 21-228 (252)
84 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-38 3.1E-43 346.0 24.3 205 839-1054 10-221 (235)
85 PRK11650 ugpC glycerol-3-phosp 100.0 1.2E-38 2.5E-43 364.0 24.1 205 840-1056 15-221 (356)
86 TIGR03265 PhnT2 putative 2-ami 100.0 1.5E-38 3.3E-43 362.6 24.6 207 837-1055 12-220 (353)
87 PRK13536 nodulation factor exp 100.0 1.9E-38 4.1E-43 360.0 25.0 212 832-1055 44-257 (340)
88 TIGR03258 PhnT 2-aminoethylpho 100.0 1.9E-38 4.1E-43 362.2 25.2 207 148-396 18-227 (362)
89 COG1124 DppF ABC-type dipeptid 100.0 1.2E-38 2.7E-43 327.9 21.1 205 149-397 21-231 (252)
90 PRK11650 ugpC glycerol-3-phosp 100.0 1.1E-38 2.3E-43 364.3 22.9 206 148-396 17-223 (356)
91 PRK11432 fbpC ferric transport 100.0 1.9E-38 4.1E-43 361.2 24.6 205 839-1055 16-222 (351)
92 PRK11432 fbpC ferric transport 100.0 1.6E-38 3.6E-43 361.6 23.2 206 148-396 19-225 (351)
93 COG1122 CbiO ABC-type cobalt t 100.0 1.2E-38 2.6E-43 339.7 20.6 201 842-1054 17-223 (235)
94 TIGR01188 drrA daunorubicin re 100.0 2.6E-38 5.6E-43 355.9 24.3 204 840-1055 4-209 (302)
95 TIGR03258 PhnT 2-aminoethylpho 100.0 2.8E-38 6E-43 360.8 24.4 205 839-1055 15-224 (362)
96 COG2884 FtsE Predicted ATPase 100.0 2E-38 4.4E-43 311.7 19.9 200 148-391 15-220 (223)
97 COG2274 SunT ABC-type bacterio 100.0 1.2E-38 2.6E-43 387.1 22.7 256 61-397 436-696 (709)
98 TIGR03265 PhnT2 putative 2-ami 100.0 1.9E-38 4.2E-43 361.8 22.9 206 148-396 17-223 (353)
99 KOG0058 Peptide exporter, ABC 100.0 7.5E-39 1.6E-43 372.7 19.8 214 142-397 475-691 (716)
100 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.6E-38 1E-42 338.5 24.5 200 842-1054 17-218 (220)
101 cd03259 ABC_Carb_Solutes_like 100.0 3.3E-38 7.1E-43 338.0 23.1 202 839-1052 10-213 (213)
102 PRK10851 sulfate/thiosulfate t 100.0 3.7E-38 8E-43 359.5 24.8 211 836-1055 9-222 (353)
103 TIGR01257 rim_protein retinal- 100.0 4E-36 8.8E-41 393.2 47.0 201 841-1054 942-1144(2272)
104 PRK13537 nodulation ABC transp 100.0 5.3E-38 1.1E-42 353.0 25.5 206 148-397 20-227 (306)
105 TIGR01186 proV glycine betaine 100.0 3.3E-38 7.2E-43 358.9 24.0 207 148-397 6-219 (363)
106 TIGR01186 proV glycine betaine 100.0 5.2E-38 1.1E-42 357.3 25.1 205 839-1055 3-215 (363)
107 TIGR01288 nodI ATP-binding ABC 100.0 4.9E-38 1.1E-42 353.9 24.5 210 834-1055 9-220 (303)
108 COG3840 ThiQ ABC-type thiamine 100.0 2.3E-38 5.1E-43 308.3 18.0 201 153-396 17-218 (231)
109 cd03265 ABC_DrrA DrrA is the A 100.0 6E-38 1.3E-42 337.6 23.2 205 838-1054 9-216 (220)
110 PRK09536 btuD corrinoid ABC tr 100.0 5.9E-38 1.3E-42 361.1 24.6 224 834-1066 8-237 (402)
111 COG4152 ABC-type uncharacteriz 100.0 1.3E-38 2.7E-43 324.2 16.7 234 830-1076 3-248 (300)
112 PRK09452 potA putrescine/sperm 100.0 4.2E-38 9.2E-43 360.5 23.1 206 148-396 27-233 (375)
113 COG4559 ABC-type hemin transpo 100.0 3.4E-38 7.5E-43 314.9 19.3 234 840-1083 12-256 (259)
114 cd03269 ABC_putative_ATPase Th 100.0 7.7E-38 1.7E-42 334.3 23.5 201 839-1052 10-210 (210)
115 COG2274 SunT ABC-type bacterio 100.0 2.1E-36 4.6E-41 367.5 38.7 215 813-1055 468-692 (709)
116 PRK09452 potA putrescine/sperm 100.0 7.5E-38 1.6E-42 358.5 24.7 204 840-1055 25-230 (375)
117 TIGR00960 3a0501s02 Type II (G 100.0 6.5E-38 1.4E-42 336.4 22.3 193 842-1045 16-214 (216)
118 cd03218 ABC_YhbG The ABC trans 100.0 9.9E-38 2.2E-42 338.9 23.6 206 838-1055 9-218 (232)
119 PRK10851 sulfate/thiosulfate t 100.0 1.4E-37 3E-42 354.7 25.6 210 148-396 15-225 (353)
120 COG1122 CbiO ABC-type cobalt t 100.0 8E-38 1.7E-42 333.3 22.0 207 148-397 17-228 (235)
121 TIGR03522 GldA_ABC_ATP gliding 100.0 1.1E-37 2.4E-42 350.4 24.3 210 834-1056 7-218 (301)
122 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-37 3.3E-42 338.3 24.0 207 839-1054 10-227 (236)
123 COG0410 LivF ABC-type branched 100.0 6.4E-38 1.4E-42 320.6 19.6 213 831-1056 5-223 (237)
124 PRK11000 maltose/maltodextrin 100.0 1.3E-37 2.9E-42 357.7 24.7 206 838-1055 12-219 (369)
125 cd03266 ABC_NatA_sodium_export 100.0 1.2E-37 2.6E-42 334.9 22.7 198 843-1052 19-218 (218)
126 cd03296 ABC_CysA_sulfate_impor 100.0 1.8E-37 3.9E-42 338.2 24.3 208 839-1055 12-222 (239)
127 PRK11607 potG putrescine trans 100.0 1.6E-37 3.4E-42 356.5 24.9 204 840-1055 30-235 (377)
128 cd03301 ABC_MalK_N The N-termi 100.0 1.7E-37 3.6E-42 332.6 23.5 201 840-1052 11-213 (213)
129 COG3840 ThiQ ABC-type thiamine 100.0 3.9E-38 8.4E-43 306.8 16.7 197 847-1055 17-215 (231)
130 PRK11153 metN DL-methionine tr 100.0 1.7E-37 3.6E-42 354.1 24.9 203 841-1055 17-226 (343)
131 cd03226 ABC_cobalt_CbiO_domain 100.0 9.5E-38 2.1E-42 332.3 21.3 192 842-1049 13-205 (205)
132 KOG0058 Peptide exporter, ABC 100.0 3.3E-36 7.1E-41 350.7 35.6 215 815-1054 464-686 (716)
133 cd03268 ABC_BcrA_bacitracin_re 100.0 1.4E-37 3.1E-42 331.8 22.3 198 839-1052 10-208 (208)
134 cd03260 ABC_PstB_phosphate_tra 100.0 1.8E-37 3.9E-42 335.6 23.1 206 839-1055 10-225 (227)
135 cd03256 ABC_PhnC_transporter A 100.0 1.6E-37 3.5E-42 339.3 22.5 205 842-1055 14-230 (241)
136 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.8E-37 3.8E-42 333.6 22.3 192 842-1045 17-216 (218)
137 cd03261 ABC_Org_Solvent_Resist 100.0 2.6E-37 5.6E-42 336.1 23.3 206 148-395 13-224 (235)
138 cd03258 ABC_MetN_methionine_tr 100.0 2.8E-37 6.1E-42 335.5 23.3 200 843-1054 19-225 (233)
139 PRK11607 potG putrescine trans 100.0 2.1E-37 4.5E-42 355.5 23.4 206 148-396 32-238 (377)
140 TIGR01188 drrA daunorubicin re 100.0 1.6E-37 3.4E-42 349.6 21.9 206 148-397 6-213 (302)
141 PRK11153 metN DL-methionine tr 100.0 4.1E-37 8.8E-42 351.0 25.5 206 148-396 18-229 (343)
142 COG0410 LivF ABC-type branched 100.0 2.1E-37 4.6E-42 316.7 20.4 206 148-397 16-226 (237)
143 PRK13637 cbiO cobalt transport 100.0 4.3E-37 9.3E-42 343.3 24.2 202 842-1055 20-230 (287)
144 PRK11248 tauB taurine transpor 100.0 5.3E-37 1.2E-41 336.8 24.4 203 839-1054 11-215 (255)
145 TIGR02673 FtsE cell division A 100.0 3E-37 6.6E-42 330.8 22.0 194 841-1045 14-213 (214)
146 PRK09493 glnQ glutamine ABC tr 100.0 5.1E-37 1.1E-41 334.9 24.0 205 840-1055 12-221 (240)
147 PRK11629 lolD lipoprotein tran 100.0 8.4E-37 1.8E-41 331.5 25.2 200 842-1054 22-229 (233)
148 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.6E-37 1.2E-41 339.5 24.2 211 833-1055 28-246 (269)
149 TIGR02315 ABC_phnC phosphonate 100.0 3.2E-37 6.9E-42 337.3 21.9 206 841-1055 14-231 (243)
150 PRK11000 maltose/maltodextrin 100.0 3.9E-37 8.5E-42 353.9 23.7 206 148-396 16-222 (369)
151 cd03263 ABC_subfamily_A The AB 100.0 5E-37 1.1E-41 330.6 22.8 200 842-1054 15-216 (220)
152 PRK11264 putative amino-acid A 100.0 6.3E-37 1.4E-41 336.4 24.1 206 839-1055 13-229 (250)
153 cd03224 ABC_TM1139_LivF_branch 100.0 5E-37 1.1E-41 331.1 22.7 202 839-1054 10-216 (222)
154 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.1E-37 1.3E-41 334.6 23.6 202 842-1055 14-221 (242)
155 cd03235 ABC_Metallic_Cations A 100.0 3.8E-37 8.3E-42 329.7 21.6 202 839-1052 9-213 (213)
156 KOG0057 Mitochondrial Fe/S clu 100.0 3.2E-37 6.9E-42 346.9 21.5 229 93-397 343-574 (591)
157 PRK11831 putative ABC transpor 100.0 8.6E-37 1.9E-41 338.2 24.7 217 840-1067 18-245 (269)
158 PRK13536 nodulation factor exp 100.0 5.9E-37 1.3E-41 347.8 23.8 206 148-397 54-261 (340)
159 cd03292 ABC_FtsE_transporter F 100.0 5.6E-37 1.2E-41 328.8 22.4 193 842-1045 14-212 (214)
160 COG0411 LivG ABC-type branched 100.0 1.8E-37 3.9E-42 319.7 17.4 221 146-397 15-239 (250)
161 PRK10895 lipopolysaccharide AB 100.0 7.3E-37 1.6E-41 333.9 23.3 207 838-1055 12-222 (241)
162 cd03225 ABC_cobalt_CbiO_domain 100.0 5.5E-37 1.2E-41 328.1 21.8 193 842-1045 14-210 (211)
163 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.2E-36 2.6E-41 331.0 24.5 204 839-1055 11-217 (236)
164 cd03264 ABC_drug_resistance_li 100.0 7.7E-37 1.7E-41 326.9 22.2 200 839-1052 10-211 (211)
165 KOG0066 eIF2-interacting prote 100.0 3.5E-36 7.6E-41 325.1 27.3 204 813-1056 583-788 (807)
166 PRK13651 cobalt transporter AT 100.0 8.1E-37 1.8E-41 342.6 23.2 203 842-1056 20-251 (305)
167 PRK13634 cbiO cobalt transport 100.0 8E-37 1.7E-41 341.6 23.0 202 842-1055 20-231 (290)
168 COG4988 CydD ABC-type transpor 100.0 3.3E-35 7.3E-40 336.7 36.6 215 813-1056 317-540 (559)
169 PRK10908 cell division protein 100.0 1.1E-36 2.3E-41 328.3 23.1 197 841-1049 14-216 (222)
170 PRK13647 cbiO cobalt transport 100.0 1E-36 2.2E-41 338.1 23.5 202 842-1055 18-223 (274)
171 cd03262 ABC_HisP_GlnQ_permease 100.0 9.3E-37 2E-41 326.8 22.0 197 839-1045 10-211 (213)
172 cd03234 ABCG_White The White s 100.0 2E-36 4.3E-41 327.0 24.6 205 842-1052 20-226 (226)
173 cd03296 ABC_CysA_sulfate_impor 100.0 2.3E-36 5.1E-41 329.4 25.2 209 148-395 15-224 (239)
174 cd03259 ABC_Carb_Solutes_like 100.0 1.1E-36 2.4E-41 326.2 21.9 200 148-390 13-213 (213)
175 TIGR03740 galliderm_ABC gallid 100.0 2.2E-36 4.8E-41 326.1 24.4 211 839-1067 10-220 (223)
176 PRK10619 histidine/lysine/argi 100.0 2.4E-36 5.2E-41 332.9 25.1 205 840-1055 16-237 (257)
177 PRK11300 livG leucine/isoleuci 100.0 1.6E-36 3.6E-41 334.1 23.7 209 839-1056 15-240 (255)
178 PRK13643 cbiO cobalt transport 100.0 2.5E-36 5.4E-41 337.3 25.2 224 149-416 20-255 (288)
179 PRK13646 cbiO cobalt transport 100.0 1.2E-36 2.7E-41 339.6 22.8 201 842-1055 20-231 (286)
180 cd03257 ABC_NikE_OppD_transpor 100.0 1.6E-36 3.5E-41 328.6 23.0 200 843-1052 19-228 (228)
181 PRK13637 cbiO cobalt transport 100.0 1.3E-36 2.8E-41 339.3 22.9 218 148-408 20-248 (287)
182 PRK13641 cbiO cobalt transport 100.0 1.7E-36 3.7E-41 338.6 23.7 202 842-1055 20-230 (287)
183 cd03265 ABC_DrrA DrrA is the A 100.0 1.2E-36 2.6E-41 327.4 21.7 204 148-394 13-218 (220)
184 PRK11247 ssuB aliphatic sulfon 100.0 1.6E-36 3.5E-41 332.3 22.8 196 840-1055 23-219 (257)
185 PRK13631 cbiO cobalt transport 100.0 1.7E-36 3.8E-41 341.9 23.5 201 842-1055 39-261 (320)
186 TIGR02211 LolD_lipo_ex lipopro 100.0 2.5E-36 5.5E-41 325.3 23.6 195 842-1049 18-220 (221)
187 TIGR00960 3a0501s02 Type II (G 100.0 1.1E-36 2.5E-41 326.8 20.8 195 148-386 16-216 (216)
188 PRK13643 cbiO cobalt transport 100.0 2E-36 4.3E-41 338.1 23.5 201 843-1056 20-230 (288)
189 PRK11231 fecE iron-dicitrate t 100.0 2.1E-36 4.6E-41 332.9 23.3 210 838-1056 11-224 (255)
190 TIGR03411 urea_trans_UrtD urea 100.0 3E-36 6.6E-41 329.3 24.4 207 839-1055 12-227 (242)
191 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.7E-36 5.9E-41 334.0 24.2 207 147-396 36-249 (269)
192 PRK11614 livF leucine/isoleuci 100.0 1.7E-36 3.7E-41 330.2 22.2 202 840-1055 16-222 (237)
193 TIGR00972 3a0107s01c2 phosphat 100.0 3E-36 6.5E-41 330.2 24.2 205 839-1054 11-227 (247)
194 TIGR01288 nodI ATP-binding ABC 100.0 1.8E-36 4E-41 341.0 23.1 206 148-397 17-224 (303)
195 COG4559 ABC-type hemin transpo 100.0 1E-36 2.2E-41 304.4 18.4 206 149-396 15-229 (259)
196 COG1137 YhbG ABC-type (unclass 100.0 1.8E-37 4E-42 307.0 12.9 209 147-397 16-228 (243)
197 PRK13650 cbiO cobalt transport 100.0 3.8E-36 8.3E-41 334.4 25.2 205 148-396 20-228 (279)
198 PRK13636 cbiO cobalt transport 100.0 2.4E-36 5.3E-41 336.7 23.6 204 841-1056 18-228 (283)
199 PRK11124 artP arginine transpo 100.0 3.1E-36 6.8E-41 329.1 23.8 205 839-1055 12-226 (242)
200 PRK10070 glycine betaine trans 100.0 2.9E-36 6.2E-41 346.9 24.5 205 839-1055 38-250 (400)
201 cd03219 ABC_Mj1267_LivG_branch 100.0 2.5E-36 5.4E-41 328.8 22.7 214 148-395 13-230 (236)
202 PRK14268 phosphate ABC transpo 100.0 4.3E-36 9.3E-41 330.9 24.6 208 840-1055 23-238 (258)
203 TIGR03005 ectoine_ehuA ectoine 100.0 3.8E-36 8.2E-41 330.4 24.1 205 840-1055 11-232 (252)
204 PRK13650 cbiO cobalt transport 100.0 2.5E-36 5.3E-41 336.0 22.8 201 842-1055 20-225 (279)
205 TIGR01978 sufC FeS assembly AT 100.0 4.6E-36 9.9E-41 328.3 24.4 210 839-1054 10-229 (243)
206 PRK15079 oligopeptide ABC tran 100.0 4.1E-36 8.8E-41 340.1 24.6 205 841-1055 33-247 (331)
207 PRK14247 phosphate ABC transpo 100.0 5.4E-36 1.2E-40 328.9 24.7 212 839-1055 13-230 (250)
208 PRK13548 hmuV hemin importer A 100.0 4.2E-36 9E-41 330.7 23.7 205 839-1055 12-226 (258)
209 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.7E-36 5.8E-41 324.4 21.6 195 148-386 17-218 (218)
210 cd03218 ABC_YhbG The ABC trans 100.0 3.5E-36 7.7E-41 326.7 22.7 204 148-395 13-220 (232)
211 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.4E-36 7.4E-41 321.9 22.2 194 847-1052 16-211 (211)
212 COG1245 Predicted ATPase, RNas 100.0 2.6E-35 5.6E-40 322.6 29.4 169 849-1043 361-530 (591)
213 PRK09984 phosphonate/organopho 100.0 4.3E-36 9.2E-41 331.8 23.7 222 839-1067 14-251 (262)
214 TIGR03410 urea_trans_UrtE urea 100.0 3.5E-36 7.6E-41 326.2 22.5 204 839-1057 10-219 (230)
215 cd03258 ABC_MetN_methionine_tr 100.0 2.9E-36 6.3E-41 327.5 21.9 204 149-395 19-228 (233)
216 TIGR03415 ABC_choXWV_ATP choli 100.0 5.1E-36 1.1E-40 342.4 24.9 206 839-1056 34-251 (382)
217 COG4988 CydD ABC-type transpor 100.0 2.1E-36 4.5E-41 346.6 21.6 200 149-397 335-543 (559)
218 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.3E-36 9.2E-41 323.2 22.8 200 148-392 17-218 (220)
219 cd03301 ABC_MalK_N The N-termi 100.0 3.7E-36 8E-41 322.1 22.1 199 149-390 14-213 (213)
220 PRK09473 oppD oligopeptide tra 100.0 6.7E-36 1.4E-40 338.6 25.4 213 148-396 29-250 (330)
221 cd03260 ABC_PstB_phosphate_tra 100.0 2.6E-36 5.7E-41 326.5 21.1 203 149-394 14-226 (227)
222 TIGR03522 GldA_ABC_ATP gliding 100.0 2.8E-36 6E-41 339.1 22.0 205 148-397 15-221 (301)
223 PRK13644 cbiO cobalt transport 100.0 3.8E-36 8.2E-41 333.6 22.8 201 842-1055 15-220 (274)
224 PRK13634 cbiO cobalt transport 100.0 2.8E-36 6.1E-41 337.2 21.9 218 148-408 20-249 (290)
225 PRK10575 iron-hydroxamate tran 100.0 4.4E-36 9.5E-41 332.0 23.2 208 840-1056 22-234 (265)
226 PRK11629 lolD lipoprotein tran 100.0 9.1E-36 2E-40 323.4 25.2 201 148-392 22-229 (233)
227 PRK10070 glycine betaine trans 100.0 3.8E-36 8.2E-41 345.9 23.3 206 148-396 41-253 (400)
228 cd03266 ABC_NatA_sodium_export 100.0 3.8E-36 8.2E-41 323.3 21.9 198 149-390 19-218 (218)
229 cd03263 ABC_subfamily_A The AB 100.0 3.2E-36 6.9E-41 324.3 20.9 203 148-395 15-219 (220)
230 PRK14267 phosphate ABC transpo 100.0 7.5E-36 1.6E-40 328.4 24.1 210 840-1055 15-233 (253)
231 COG4525 TauB ABC-type taurine 100.0 2.7E-36 5.8E-41 296.8 18.2 201 842-1055 18-220 (259)
232 PRK11831 putative ABC transpor 100.0 1.2E-35 2.6E-40 329.0 25.7 207 148-396 20-232 (269)
233 PRK13652 cbiO cobalt transport 100.0 7.2E-36 1.6E-40 332.1 23.9 202 842-1055 17-223 (277)
234 PRK13651 cobalt transporter AT 100.0 5.6E-36 1.2E-40 335.8 23.2 205 148-396 20-253 (305)
235 PRK13635 cbiO cobalt transport 100.0 5E-36 1.1E-40 333.3 22.6 201 842-1055 20-225 (279)
236 PRK09536 btuD corrinoid ABC tr 100.0 8.3E-36 1.8E-40 343.3 24.9 209 148-396 16-227 (402)
237 cd03269 ABC_putative_ATPase Th 100.0 4.1E-36 8.9E-41 321.0 20.8 198 148-390 13-210 (210)
238 PRK10253 iron-enterobactin tra 100.0 5.9E-36 1.3E-40 331.0 22.7 208 840-1056 18-230 (265)
239 PRK13631 cbiO cobalt transport 100.0 9.3E-36 2E-40 335.9 24.7 216 148-408 39-279 (320)
240 PRK13649 cbiO cobalt transport 100.0 7.8E-36 1.7E-40 332.9 23.9 201 842-1055 20-230 (280)
241 PRK13638 cbiO cobalt transport 100.0 5.7E-36 1.2E-40 332.2 22.6 205 839-1055 11-221 (271)
242 cd03224 ABC_TM1139_LivF_branch 100.0 5.2E-36 1.1E-40 323.2 21.7 202 148-395 13-219 (222)
243 COG4175 ProV ABC-type proline/ 100.0 1.6E-36 3.4E-41 319.5 17.0 203 842-1056 41-251 (386)
244 PRK14241 phosphate transporter 100.0 1.1E-35 2.4E-40 327.8 24.7 211 839-1055 14-238 (258)
245 TIGR03415 ABC_choXWV_ATP choli 100.0 6.4E-36 1.4E-40 341.5 23.3 208 146-396 35-253 (382)
246 TIGR03873 F420-0_ABC_ATP propo 100.0 7.1E-36 1.5E-40 328.9 22.9 209 839-1056 11-223 (256)
247 COG4181 Predicted ABC-type tra 100.0 3.6E-36 7.9E-41 289.8 17.8 200 838-1050 19-226 (228)
248 cd03256 ABC_PhnC_transporter A 100.0 6.7E-36 1.5E-40 326.5 22.4 213 148-395 14-232 (241)
249 COG0444 DppD ABC-type dipeptid 100.0 1.1E-35 2.3E-40 320.1 23.5 215 147-396 17-242 (316)
250 PRK10584 putative ABC transpor 100.0 1.4E-35 2.9E-40 321.2 24.4 196 842-1050 23-226 (228)
251 PRK14245 phosphate ABC transpo 100.0 1.3E-35 2.9E-40 325.7 24.6 210 839-1055 13-230 (250)
252 cd03232 ABC_PDR_domain2 The pl 100.0 7.9E-36 1.7E-40 313.7 21.8 173 842-1052 20-192 (192)
253 TIGR03608 L_ocin_972_ABC putat 100.0 8.4E-36 1.8E-40 317.7 22.3 192 839-1042 8-206 (206)
254 PRK13647 cbiO cobalt transport 100.0 8.4E-36 1.8E-40 330.8 23.1 203 149-395 19-225 (274)
255 PRK14273 phosphate ABC transpo 100.0 1E-35 2.2E-40 327.5 23.4 205 840-1055 18-234 (254)
256 cd03233 ABC_PDR_domain1 The pl 100.0 1E-35 2.2E-40 315.3 22.6 183 146-390 18-202 (202)
257 PRK11022 dppD dipeptide transp 100.0 1.4E-35 3.1E-40 335.7 25.2 208 842-1055 20-239 (326)
258 PRK14269 phosphate ABC transpo 100.0 1.2E-35 2.7E-40 325.0 23.8 213 837-1055 10-226 (246)
259 COG4175 ProV ABC-type proline/ 100.0 2.2E-36 4.7E-41 318.4 17.0 222 147-419 40-268 (386)
260 PRK13646 cbiO cobalt transport 100.0 1.2E-35 2.6E-40 331.7 24.0 205 148-396 20-234 (286)
261 PRK14256 phosphate ABC transpo 100.0 2.5E-35 5.4E-40 323.9 26.1 210 840-1055 15-232 (252)
262 cd03295 ABC_OpuCA_Osmoprotecti 100.0 9.4E-36 2E-40 325.3 22.6 206 148-396 14-224 (242)
263 cd03268 ABC_BcrA_bacitracin_re 100.0 7E-36 1.5E-40 318.7 21.0 195 148-390 13-208 (208)
264 PRK15079 oligopeptide ABC tran 100.0 9.4E-36 2E-40 337.1 23.1 209 147-396 33-250 (331)
265 PRK11022 dppD dipeptide transp 100.0 2.1E-35 4.5E-40 334.3 26.0 213 148-396 20-242 (326)
266 cd03226 ABC_cobalt_CbiO_domain 100.0 5.4E-36 1.2E-40 318.8 19.9 192 148-387 13-205 (205)
267 PRK11174 cysteine/glutathione 100.0 6.3E-36 1.4E-40 368.4 23.4 207 148-397 363-572 (588)
268 TIGR01184 ntrCD nitrate transp 100.0 1E-35 2.2E-40 322.0 22.2 198 845-1054 1-199 (230)
269 PRK11308 dppF dipeptide transp 100.0 1.6E-35 3.4E-40 335.1 24.6 203 842-1055 28-240 (327)
270 PRK13635 cbiO cobalt transport 100.0 1.4E-35 3E-40 329.8 23.7 216 148-407 20-242 (279)
271 TIGR02315 ABC_phnC phosphonate 100.0 7.6E-36 1.6E-40 326.5 21.1 213 148-395 15-233 (243)
272 PRK13547 hmuV hemin importer A 100.0 1.2E-35 2.6E-40 328.2 22.9 212 838-1056 10-241 (272)
273 TIGR02769 nickel_nikE nickel i 100.0 1.5E-35 3.3E-40 327.7 23.6 204 841-1055 23-236 (265)
274 PRK14242 phosphate transporter 100.0 2E-35 4.2E-40 325.1 24.4 209 840-1055 17-233 (253)
275 PRK10771 thiQ thiamine transpo 100.0 1E-35 2.2E-40 322.8 21.8 209 847-1067 17-229 (232)
276 cd03267 ABC_NatA_like Similar 100.0 2.1E-35 4.7E-40 320.8 24.3 202 839-1052 31-236 (236)
277 cd03300 ABC_PotA_N PotA is an 100.0 1.9E-35 4.2E-40 320.6 23.9 203 840-1054 11-215 (232)
278 PRK00349 uvrA excinuclease ABC 100.0 3.8E-34 8.1E-39 356.6 38.7 124 916-1055 791-923 (943)
279 TIGR02142 modC_ABC molybdenum 100.0 1.4E-35 3.1E-40 340.1 24.0 195 847-1055 15-217 (354)
280 TIGR01277 thiQ thiamine ABC tr 100.0 1.7E-35 3.7E-40 316.8 23.1 198 844-1053 13-212 (213)
281 PRK13639 cbiO cobalt transport 100.0 1.7E-35 3.7E-40 328.8 23.7 202 842-1055 15-222 (275)
282 PRK13549 xylose transporter AT 100.0 1.2E-35 2.7E-40 358.3 24.6 220 838-1064 14-238 (506)
283 cd03234 ABCG_White The White s 100.0 1.1E-35 2.5E-40 321.2 21.7 205 148-390 20-226 (226)
284 cd03297 ABC_ModC_molybdenum_tr 100.0 1.9E-35 4.1E-40 316.7 23.0 198 838-1052 9-214 (214)
285 PRK09473 oppD oligopeptide tra 100.0 2.2E-35 4.7E-40 334.4 24.7 210 841-1056 28-248 (330)
286 cd03257 ABC_NikE_OppD_transpor 100.0 2.9E-35 6.3E-40 318.7 24.6 201 149-390 19-228 (228)
287 TIGR00968 3a0106s01 sulfate AB 100.0 2.2E-35 4.9E-40 321.0 23.8 205 839-1055 10-216 (237)
288 KOG0055 Multidrug/pheromone ex 100.0 5.5E-36 1.2E-40 367.4 21.1 214 142-397 997-1213(1228)
289 PRK14250 phosphate ABC transpo 100.0 1.5E-35 3.2E-40 323.3 22.3 199 840-1055 14-217 (241)
290 PRK09493 glnQ glutamine ABC tr 100.0 1.5E-35 3.2E-40 323.4 22.3 205 148-396 14-224 (240)
291 PRK15093 antimicrobial peptide 100.0 2.4E-35 5.1E-40 335.0 24.8 211 841-1055 19-244 (330)
292 COG4525 TauB ABC-type taurine 100.0 1.2E-35 2.6E-40 292.2 19.1 206 148-398 18-225 (259)
293 PRK11308 dppF dipeptide transp 100.0 3.8E-35 8.2E-40 332.0 26.1 207 148-396 28-243 (327)
294 cd03233 ABC_PDR_domain1 The pl 100.0 3.3E-35 7.2E-40 311.4 23.9 196 816-1052 3-202 (202)
295 TIGR00972 3a0107s01c2 phosphat 100.0 3.9E-35 8.4E-40 321.4 25.2 206 149-396 15-231 (247)
296 PRK13645 cbiO cobalt transport 100.0 1.8E-35 3.9E-40 331.2 22.8 201 843-1055 25-236 (289)
297 PRK11264 putative amino-acid A 100.0 1.9E-35 4.2E-40 324.6 22.6 205 149-396 17-232 (250)
298 TIGR02211 LolD_lipo_ex lipopro 100.0 2.8E-35 6.1E-40 317.2 23.3 196 148-387 18-220 (221)
299 PRK00635 excinuclease ABC subu 100.0 6.7E-34 1.4E-38 366.8 40.2 135 913-1055 759-902 (1809)
300 PRK13636 cbiO cobalt transport 100.0 2.7E-35 5.8E-40 328.3 23.9 206 149-397 20-231 (283)
301 PRK14259 phosphate ABC transpo 100.0 1.9E-35 4.1E-40 327.3 22.4 208 840-1055 24-249 (269)
302 PRK15112 antimicrobial peptide 100.0 2.1E-35 4.6E-40 326.7 22.8 203 842-1055 26-235 (267)
303 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.7E-35 5.9E-40 320.4 23.3 206 148-397 14-221 (236)
304 PRK10744 pstB phosphate transp 100.0 2.8E-35 6.1E-40 324.8 23.7 204 841-1055 25-240 (260)
305 PRK11248 tauB taurine transpor 100.0 3.8E-35 8.3E-40 322.1 24.6 200 148-392 14-215 (255)
306 COG4604 CeuD ABC-type enteroch 100.0 1.7E-36 3.7E-41 298.9 12.4 226 831-1066 3-234 (252)
307 PRK14235 phosphate transporter 100.0 3.5E-35 7.6E-40 325.0 24.5 209 840-1054 30-246 (267)
308 PRK11247 ssuB aliphatic sulfon 100.0 3.1E-35 6.6E-40 322.3 23.7 194 149-393 26-219 (257)
309 cd03264 ABC_drug_resistance_li 100.0 1.3E-35 2.8E-40 317.4 20.2 197 148-390 13-211 (211)
310 PRK11144 modC molybdate transp 100.0 2.3E-35 4.9E-40 337.9 23.6 192 847-1056 16-215 (352)
311 PRK13640 cbiO cobalt transport 100.0 2E-35 4.4E-40 329.1 22.5 201 842-1055 20-228 (282)
312 PRK13633 cobalt transporter AT 100.0 2.3E-35 4.9E-40 328.6 22.8 201 842-1055 23-229 (280)
313 COG1129 MglA ABC-type sugar tr 100.0 2.7E-35 5.8E-40 337.4 23.8 228 830-1066 9-243 (500)
314 PRK13632 cbiO cobalt transport 100.0 2.4E-35 5.2E-40 327.0 22.7 202 841-1055 21-227 (271)
315 cd03299 ABC_ModC_like Archeal 100.0 4E-35 8.8E-40 318.6 23.8 200 844-1055 14-215 (235)
316 cd03267 ABC_NatA_like Similar 100.0 3.3E-35 7.2E-40 319.3 23.1 202 146-390 32-236 (236)
317 PRK13644 cbiO cobalt transport 100.0 2.6E-35 5.7E-40 326.8 22.7 203 149-396 16-223 (274)
318 PRK11144 modC molybdate transp 100.0 2.1E-35 4.5E-40 338.1 22.3 195 153-396 16-217 (352)
319 PRK13632 cbiO cobalt transport 100.0 3.4E-35 7.4E-40 325.8 23.3 205 148-396 22-230 (271)
320 PRK13648 cbiO cobalt transport 100.0 3.3E-35 7.1E-40 325.7 23.1 202 842-1056 22-228 (269)
321 COG4598 HisP ABC-type histidin 100.0 5.1E-36 1.1E-40 290.5 14.4 214 831-1055 8-237 (256)
322 PRK14274 phosphate ABC transpo 100.0 5.4E-35 1.2E-39 322.5 24.2 209 840-1055 23-239 (259)
323 cd03213 ABCG_EPDR ABCG transpo 100.0 3.3E-35 7.1E-40 309.4 21.5 171 842-1052 22-194 (194)
324 PRK14237 phosphate transporter 100.0 1.1E-34 2.4E-39 321.0 26.6 209 840-1055 31-247 (267)
325 PRK14242 phosphate transporter 100.0 1.2E-34 2.6E-39 318.8 26.6 210 149-396 20-236 (253)
326 PRK10619 histidine/lysine/argi 100.0 5.2E-35 1.1E-39 322.2 23.7 205 148-396 18-240 (257)
327 TIGR02673 FtsE cell division A 100.0 2.5E-35 5.4E-40 316.0 20.5 194 148-385 15-214 (214)
328 COG0444 DppD ABC-type dipeptid 100.0 4.4E-35 9.6E-40 315.4 22.4 211 841-1056 17-240 (316)
329 PRK14257 phosphate ABC transpo 100.0 5.6E-35 1.2E-39 330.5 24.4 211 148-396 95-312 (329)
330 PRK14244 phosphate ABC transpo 100.0 5.7E-35 1.2E-39 320.9 23.8 209 840-1054 16-232 (251)
331 cd03292 ABC_FtsE_transporter F 100.0 2.1E-35 4.5E-40 316.7 19.8 195 148-386 14-214 (214)
332 PRK14270 phosphate ABC transpo 100.0 6.6E-35 1.4E-39 320.4 24.1 208 840-1055 15-231 (251)
333 PRK10895 lipopolysaccharide AB 100.0 3.9E-35 8.5E-40 320.3 22.2 206 148-396 16-225 (241)
334 PRK14273 phosphate ABC transpo 100.0 9.5E-35 2.1E-39 319.7 25.4 206 149-396 21-237 (254)
335 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.4E-35 5.2E-40 368.8 23.3 205 148-397 466-673 (686)
336 PRK10762 D-ribose transporter 100.0 4.1E-35 8.9E-40 353.4 24.4 219 838-1065 13-237 (501)
337 TIGR03410 urea_trans_UrtE urea 100.0 4E-35 8.8E-40 317.9 21.9 202 148-395 13-219 (230)
338 PRK13641 cbiO cobalt transport 100.0 2.7E-35 5.8E-40 329.0 21.0 205 148-396 20-233 (287)
339 PRK14240 phosphate transporter 100.0 6.9E-35 1.5E-39 320.1 24.0 208 840-1054 14-229 (250)
340 PRK15093 antimicrobial peptide 100.0 9E-35 1.9E-39 330.3 25.6 217 148-396 20-247 (330)
341 PRK14272 phosphate ABC transpo 100.0 8.9E-35 1.9E-39 319.7 24.7 211 839-1055 14-232 (252)
342 TIGR02770 nickel_nikD nickel i 100.0 5.2E-35 1.1E-39 316.8 22.5 201 844-1054 1-210 (230)
343 PRK14239 phosphate transporter 100.0 7.7E-35 1.7E-39 320.2 24.0 208 840-1055 16-232 (252)
344 PRK13648 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 321.6 25.3 204 149-396 23-230 (269)
345 PRK10584 putative ABC transpor 100.0 1.1E-34 2.3E-39 314.1 24.6 198 148-389 23-227 (228)
346 PRK14271 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 321.1 26.1 225 840-1071 32-268 (276)
347 PRK13652 cbiO cobalt transport 100.0 6.6E-35 1.4E-39 324.4 23.4 205 149-396 18-226 (277)
348 PRK14263 phosphate ABC transpo 100.0 9E-35 1.9E-39 320.3 24.3 209 839-1055 18-241 (261)
349 TIGR02982 heterocyst_DevA ABC 100.0 7.1E-35 1.5E-39 313.6 22.8 195 842-1048 18-219 (220)
350 PRK11124 artP arginine transpo 100.0 6.4E-35 1.4E-39 318.8 22.5 203 149-395 16-228 (242)
351 PRK14260 phosphate ABC transpo 100.0 8.4E-35 1.8E-39 320.8 23.7 210 840-1055 18-239 (259)
352 PRK14249 phosphate ABC transpo 100.0 9.9E-35 2.1E-39 319.0 24.1 209 840-1055 15-231 (251)
353 PRK14258 phosphate ABC transpo 100.0 1.1E-34 2.5E-39 320.0 24.7 211 840-1055 18-241 (261)
354 PRK14253 phosphate ABC transpo 100.0 9.2E-35 2E-39 319.0 23.8 209 840-1055 14-229 (249)
355 PRK14250 phosphate ABC transpo 100.0 1E-34 2.2E-39 316.6 24.0 200 149-396 17-220 (241)
356 TIGR02142 modC_ABC molybdenum 100.0 6.7E-35 1.4E-39 334.5 23.5 199 153-396 15-220 (354)
357 TIGR02770 nickel_nikD nickel i 100.0 6.3E-35 1.4E-39 316.1 22.0 207 150-396 1-214 (230)
358 TIGR01184 ntrCD nitrate transp 100.0 4.8E-35 1E-39 316.8 21.0 201 151-394 1-201 (230)
359 PRK09700 D-allose transporter 100.0 5.9E-35 1.3E-39 353.0 24.0 210 838-1056 14-231 (510)
360 PRK11176 lipid transporter ATP 100.0 5.3E-35 1.2E-39 359.9 24.0 209 148-397 356-567 (582)
361 PRK14257 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 328.2 24.5 208 842-1056 95-310 (329)
362 PRK14248 phosphate ABC transpo 100.0 9E-35 2E-39 322.2 23.5 205 840-1055 32-248 (268)
363 cd03231 ABC_CcmA_heme_exporter 100.0 4.8E-35 1E-39 310.2 20.3 187 839-1042 10-198 (201)
364 PRK13640 cbiO cobalt transport 100.0 1.1E-34 2.3E-39 323.4 24.1 208 148-396 20-231 (282)
365 PRK14262 phosphate ABC transpo 100.0 1.1E-34 2.5E-39 318.4 24.0 208 840-1054 14-229 (250)
366 PRK11614 livF leucine/isoleuci 100.0 4.5E-35 9.7E-40 319.0 20.6 203 148-396 18-225 (237)
367 TIGR02769 nickel_nikE nickel i 100.0 8E-35 1.7E-39 322.0 22.9 207 148-396 24-239 (265)
368 TIGR03411 urea_trans_UrtD urea 100.0 8E-35 1.7E-39 318.1 22.6 211 148-395 15-229 (242)
369 COG1132 MdlB ABC-type multidru 100.0 4.8E-35 1E-39 358.5 23.2 209 147-397 341-552 (567)
370 PRK11701 phnK phosphonate C-P 100.0 1.3E-34 2.7E-39 319.4 24.2 205 840-1055 17-237 (258)
371 PRK13548 hmuV hemin importer A 100.0 8.1E-35 1.8E-39 320.4 22.6 206 148-396 15-229 (258)
372 TIGR03740 galliderm_ABC gallid 100.0 9.6E-35 2.1E-39 313.4 22.7 197 148-393 13-209 (223)
373 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.3E-33 2.9E-38 353.2 36.5 208 816-1054 451-668 (686)
374 PRK14237 phosphate transporter 100.0 2.9E-34 6.3E-39 317.7 27.1 211 148-396 33-250 (267)
375 PRK10908 cell division protein 100.0 6E-35 1.3E-39 314.7 21.1 196 148-387 15-216 (222)
376 PRK13543 cytochrome c biogenes 100.0 7.7E-35 1.7E-39 311.7 21.7 190 840-1043 22-211 (214)
377 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.4E-34 3E-39 311.8 23.7 200 832-1052 25-224 (224)
378 cd03230 ABC_DR_subfamily_A Thi 100.0 7E-35 1.5E-39 301.3 20.2 159 840-1045 11-171 (173)
379 PRK13642 cbiO cobalt transport 100.0 1.2E-34 2.6E-39 322.3 23.5 201 842-1055 20-225 (277)
380 PRK13538 cytochrome c biogenes 100.0 6.8E-35 1.5E-39 309.9 20.6 190 839-1042 11-202 (204)
381 PRK14269 phosphate ABC transpo 100.0 2.2E-34 4.7E-39 315.2 25.1 212 148-396 15-229 (246)
382 cd03298 ABC_ThiQ_thiamine_tran 100.0 8.5E-35 1.8E-39 311.1 21.3 195 153-390 16-211 (211)
383 TIGR03005 ectoine_ehuA ectoine 100.0 1E-34 2.3E-39 319.0 22.6 206 148-396 13-235 (252)
384 KOG0057 Mitochondrial Fe/S clu 100.0 2E-35 4.4E-40 332.3 17.2 211 814-1054 349-569 (591)
385 cd03225 ABC_cobalt_CbiO_domain 100.0 6.3E-35 1.4E-39 312.2 20.1 194 148-385 14-211 (211)
386 PRK14247 phosphate ABC transpo 100.0 1.6E-34 3.5E-39 317.2 23.8 213 148-396 16-233 (250)
387 PRK13649 cbiO cobalt transport 100.0 1.4E-34 3.1E-39 322.7 23.6 205 148-396 20-233 (280)
388 PRK10418 nikD nickel transport 100.0 1.3E-34 2.9E-39 318.3 22.9 202 842-1055 16-226 (254)
389 PRK11300 livG leucine/isoleuci 100.0 1.5E-34 3.3E-39 318.5 23.4 221 148-396 18-242 (255)
390 PRK14268 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 319.7 22.3 205 148-395 25-240 (258)
391 PRK13633 cobalt transporter AT 100.0 9.6E-35 2.1E-39 323.6 22.0 205 148-396 23-232 (280)
392 PRK14275 phosphate ABC transpo 100.0 1.8E-34 4E-39 321.9 24.2 208 840-1055 50-266 (286)
393 PRK10744 pstB phosphate transp 100.0 2.7E-34 6E-39 316.9 25.3 210 149-396 27-243 (260)
394 PRK10247 putative ABC transpor 100.0 7.1E-35 1.5E-39 314.5 20.1 198 840-1052 18-220 (225)
395 PRK10790 putative multidrug tr 100.0 1.2E-34 2.6E-39 357.1 24.9 206 149-397 355-563 (592)
396 PRK13639 cbiO cobalt transport 100.0 1.9E-34 4E-39 320.4 24.0 204 149-396 16-225 (275)
397 PRK13638 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 320.8 23.1 205 148-396 14-224 (271)
398 PRK14261 phosphate ABC transpo 100.0 2.2E-34 4.8E-39 316.6 24.1 209 840-1055 17-233 (253)
399 COG4987 CydC ABC-type transpor 100.0 3.4E-35 7.4E-40 330.5 17.9 202 147-397 350-561 (573)
400 TIGR01978 sufC FeS assembly AT 100.0 2E-34 4.4E-39 315.2 23.7 213 148-396 13-233 (243)
401 PRK10982 galactose/methyl gala 100.0 1.3E-34 2.9E-39 348.3 24.4 218 839-1065 8-230 (491)
402 PRK14251 phosphate ABC transpo 100.0 2.2E-34 4.7E-39 316.4 23.9 204 840-1054 15-230 (251)
403 PRK15056 manganese/iron transp 100.0 1.6E-34 3.4E-39 320.6 23.0 206 841-1056 19-227 (272)
404 cd03300 ABC_PotA_N PotA is an 100.0 2.2E-34 4.9E-39 312.2 23.6 206 148-396 13-219 (232)
405 PRK10419 nikE nickel transport 100.0 2.1E-34 4.6E-39 318.8 23.8 205 841-1056 24-238 (268)
406 cd03235 ABC_Metallic_Cations A 100.0 6.1E-35 1.3E-39 312.7 18.9 200 148-390 12-213 (213)
407 PRK14254 phosphate ABC transpo 100.0 2.2E-34 4.9E-39 320.8 24.1 202 840-1054 50-264 (285)
408 TIGR03873 F420-0_ABC_ATP propo 100.0 2E-34 4.2E-39 317.5 23.3 208 148-395 14-224 (256)
409 PRK13642 cbiO cobalt transport 100.0 3.2E-34 6.9E-39 318.9 25.2 205 148-396 20-228 (277)
410 PRK15439 autoinducer 2 ABC tra 100.0 1.2E-34 2.6E-39 349.6 23.6 201 840-1056 22-226 (510)
411 PRK14255 phosphate ABC transpo 100.0 3E-34 6.5E-39 315.4 24.7 209 840-1055 16-232 (252)
412 PRK14236 phosphate transporter 100.0 4.5E-34 9.8E-39 317.0 26.3 208 841-1055 37-252 (272)
413 TIGR02633 xylG D-xylose ABC tr 100.0 1.8E-34 3.9E-39 348.2 24.9 212 838-1056 10-227 (500)
414 PRK14265 phosphate ABC transpo 100.0 1.7E-34 3.8E-39 320.3 22.8 209 840-1056 31-255 (274)
415 PRK14245 phosphate ABC transpo 100.0 3.6E-34 7.9E-39 314.3 24.9 211 148-396 16-233 (250)
416 PRK11288 araG L-arabinose tran 100.0 1.7E-34 3.7E-39 348.0 24.3 206 839-1053 14-223 (501)
417 TIGR00630 uvra excinuclease AB 100.0 5.9E-33 1.3E-37 345.4 38.5 104 944-1054 808-920 (924)
418 cd03299 ABC_ModC_like Archeal 100.0 2.3E-34 4.9E-39 312.7 22.7 204 150-396 14-218 (235)
419 cd03252 ABCC_Hemolysin The ABC 100.0 6.7E-35 1.5E-39 317.7 18.5 196 842-1054 15-220 (237)
420 PRK10575 iron-hydroxamate tran 100.0 1.5E-34 3.2E-39 319.8 21.5 209 148-395 24-235 (265)
421 PRK09984 phosphonate/organopho 100.0 1.3E-34 2.8E-39 320.0 20.9 216 148-395 17-240 (262)
422 PRK10771 thiQ thiamine transpo 100.0 2.4E-34 5.1E-39 312.1 22.6 201 153-396 17-218 (232)
423 PRK14270 phosphate ABC transpo 100.0 5.6E-34 1.2E-38 313.0 25.8 211 148-396 17-234 (251)
424 CHL00131 ycf16 sulfate ABC tra 100.0 3.9E-34 8.4E-39 314.7 24.6 210 840-1055 18-237 (252)
425 TIGR01166 cbiO cobalt transpor 100.0 1.4E-34 2.9E-39 304.2 20.1 179 841-1029 4-188 (190)
426 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 9.9E-35 2.1E-39 365.0 22.5 206 148-397 492-700 (710)
427 PRK14267 phosphate ABC transpo 100.0 2.4E-34 5.1E-39 316.5 22.7 212 149-396 18-236 (253)
428 PRK14243 phosphate transporter 100.0 2.5E-34 5.4E-39 317.6 22.9 208 840-1055 21-244 (264)
429 COG4148 ModC ABC-type molybdat 100.0 2.6E-35 5.6E-40 305.2 13.9 195 153-396 16-217 (352)
430 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2E-32 4.3E-37 344.2 43.0 209 816-1054 477-695 (710)
431 PRK15112 antimicrobial peptide 100.0 2.2E-34 4.8E-39 318.6 22.4 207 148-396 26-238 (267)
432 PRK11160 cysteine/glutathione 100.0 1.6E-34 3.5E-39 353.3 23.5 200 149-397 354-562 (574)
433 PRK10253 iron-enterobactin tra 100.0 2.6E-34 5.5E-39 317.9 22.8 210 148-396 20-232 (265)
434 cd03262 ABC_HisP_GlnQ_permease 100.0 9.3E-35 2E-39 311.4 18.7 195 148-386 13-213 (213)
435 COG4618 ArpD ABC-type protease 100.0 1.2E-34 2.7E-39 322.6 20.1 235 92-399 325-562 (580)
436 TIGR01277 thiQ thiamine ABC tr 100.0 2.9E-34 6.3E-39 307.2 22.4 199 150-391 13-212 (213)
437 cd03229 ABC_Class3 This class 100.0 1.3E-34 2.7E-39 300.9 18.9 161 840-1045 11-177 (178)
438 PRK14264 phosphate ABC transpo 100.0 3.9E-34 8.4E-39 322.0 24.4 211 840-1055 56-285 (305)
439 TIGR03375 type_I_sec_LssB type 100.0 1.9E-34 4.1E-39 361.3 24.2 208 148-397 478-688 (694)
440 PRK14239 phosphate transporter 100.0 4.2E-34 9.1E-39 314.4 24.0 210 149-396 19-235 (252)
441 TIGR00958 3a01208 Conjugate Tr 100.0 2.4E-34 5.2E-39 359.6 25.0 206 148-397 494-702 (711)
442 TIGR01193 bacteriocin_ABC ABC- 100.0 2.5E-32 5.4E-37 342.9 43.3 210 816-1054 473-692 (708)
443 PRK14240 phosphate transporter 100.0 6.7E-34 1.5E-38 312.3 25.5 210 149-396 17-233 (250)
444 PRK11231 fecE iron-dicitrate t 100.0 1.9E-34 4E-39 317.5 21.2 209 148-396 15-226 (255)
445 PRK14256 phosphate ABC transpo 100.0 4.3E-34 9.3E-39 314.1 23.8 212 148-396 17-235 (252)
446 PRK14238 phosphate transporter 100.0 3.4E-34 7.4E-39 317.6 23.2 207 841-1055 36-251 (271)
447 PRK11174 cysteine/glutathione 100.0 1.3E-34 2.9E-39 356.6 22.0 209 816-1054 349-567 (588)
448 PRK13645 cbiO cobalt transport 100.0 1.8E-34 3.9E-39 323.1 21.0 205 149-396 25-239 (289)
449 PRK13539 cytochrome c biogenes 100.0 1.6E-34 3.4E-39 307.7 19.5 190 837-1043 10-199 (207)
450 PRK03695 vitamin B12-transport 100.0 4.1E-34 9E-39 312.9 23.3 198 844-1055 11-218 (248)
451 PRK14246 phosphate ABC transpo 100.0 4.2E-34 9.2E-39 314.2 23.5 209 838-1055 19-237 (257)
452 cd03251 ABCC_MsbA MsbA is an e 100.0 1E-34 2.2E-39 315.8 18.2 200 843-1054 16-220 (234)
453 TIGR00968 3a0106s01 sulfate AB 100.0 4.2E-34 9E-39 311.0 23.0 206 148-396 13-219 (237)
454 TIGR02323 CP_lyasePhnK phospho 100.0 4.3E-34 9.3E-39 314.4 23.1 205 839-1054 13-233 (253)
455 PRK14259 phosphate ABC transpo 100.0 4.7E-34 1E-38 316.1 23.1 209 148-396 26-252 (269)
456 PRK14235 phosphate transporter 100.0 4.9E-34 1.1E-38 315.9 23.2 212 148-396 32-250 (267)
457 cd03245 ABCC_bacteriocin_expor 100.0 1.8E-34 3.8E-39 310.8 19.2 195 842-1052 17-220 (220)
458 PRK14274 phosphate ABC transpo 100.0 4.7E-34 1E-38 315.0 22.9 210 149-396 26-242 (259)
459 PRK14266 phosphate ABC transpo 100.0 6E-34 1.3E-38 312.7 23.4 209 840-1055 14-230 (250)
460 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.8E-34 4E-39 318.2 19.1 197 842-1056 17-222 (275)
461 PRK14241 phosphate transporter 100.0 5.2E-34 1.1E-38 314.5 22.7 211 149-396 18-241 (258)
462 TIGR03375 type_I_sec_LssB type 100.0 1.8E-32 3.9E-37 343.4 39.5 211 816-1054 463-683 (694)
463 COG1132 MdlB ABC-type multidru 100.0 1.3E-34 2.8E-39 354.7 19.7 211 815-1054 327-547 (567)
464 COG4161 ArtP ABC-type arginine 100.0 2.2E-34 4.7E-39 274.3 16.7 212 832-1054 5-225 (242)
465 PRK14244 phosphate ABC transpo 100.0 5.3E-34 1.1E-38 313.2 22.4 212 148-396 18-236 (251)
466 PRK14248 phosphate ABC transpo 100.0 1.9E-33 4.2E-38 311.6 27.1 210 149-396 35-251 (268)
467 cd03252 ABCC_Hemolysin The ABC 100.0 4.2E-34 9.2E-39 311.4 21.4 205 148-396 15-224 (237)
468 PRK09580 sufC cysteine desulfu 100.0 7.9E-34 1.7E-38 311.5 23.7 210 839-1054 11-230 (248)
469 TIGR01189 ccmA heme ABC export 100.0 3.6E-34 7.9E-39 302.9 20.2 186 839-1041 10-197 (198)
470 KOG0056 Heavy metal exporter H 100.0 4.7E-35 1E-39 320.8 13.2 210 146-397 549-761 (790)
471 TIGR01193 bacteriocin_ABC ABC- 100.0 2.5E-34 5.4E-39 361.0 21.8 207 149-397 488-697 (708)
472 TIGR03771 anch_rpt_ABC anchore 100.0 5.8E-34 1.3E-38 306.8 21.4 211 850-1072 1-216 (223)
473 PRK13547 hmuV hemin importer A 100.0 1.1E-33 2.4E-38 312.6 24.1 213 148-396 14-243 (272)
474 cd03215 ABC_Carb_Monos_II This 100.0 4E-34 8.7E-39 298.2 19.3 159 844-1045 15-180 (182)
475 PRK14251 phosphate ABC transpo 100.0 1.4E-33 3.1E-38 309.9 24.7 211 148-396 17-234 (251)
476 PRK14271 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 314.0 24.0 211 148-396 34-250 (276)
477 PRK09544 znuC high-affinity zi 100.0 5.8E-34 1.3E-38 311.6 21.5 198 840-1065 15-217 (251)
478 PRK13545 tagH teichoic acids e 100.0 1.1E-33 2.5E-38 327.3 24.9 209 842-1072 37-245 (549)
479 PRK10418 nikD nickel transport 100.0 1.1E-33 2.3E-38 311.1 23.5 206 149-396 17-229 (254)
480 cd03289 ABCC_CFTR2 The CFTR su 100.0 6.1E-34 1.3E-38 314.0 21.3 198 149-397 18-225 (275)
481 PRK14252 phosphate ABC transpo 100.0 1.4E-33 3E-38 312.2 24.3 208 840-1055 27-245 (265)
482 PRK11701 phnK phosphonate C-P 100.0 1E-33 2.2E-38 312.1 23.0 206 149-396 20-240 (258)
483 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3E-34 6.5E-39 312.8 18.5 196 842-1054 16-221 (238)
484 PRK13540 cytochrome c biogenes 100.0 5E-34 1.1E-38 302.3 19.7 185 839-1040 11-197 (200)
485 cd03213 ABCG_EPDR ABCG transpo 100.0 1.4E-33 3E-38 297.0 22.9 170 148-390 22-194 (194)
486 cd03254 ABCC_Glucan_exporter_l 100.0 2.6E-34 5.6E-39 311.5 17.8 197 842-1054 16-221 (229)
487 cd03297 ABC_ModC_molybdenum_tr 100.0 7.3E-34 1.6E-38 304.5 21.1 192 153-390 16-214 (214)
488 PRK14262 phosphate ABC transpo 100.0 9.6E-34 2.1E-38 311.1 22.5 211 148-396 16-233 (250)
489 PRK14236 phosphate transporter 100.0 2.3E-33 5.1E-38 311.3 25.7 210 149-396 39-255 (272)
490 PRK14255 phosphate ABC transpo 100.0 2.8E-33 6.1E-38 307.8 25.9 211 148-396 18-235 (252)
491 COG3845 ABC-type uncharacteriz 100.0 1E-33 2.2E-38 316.8 22.1 215 830-1053 5-223 (501)
492 PRK13546 teichoic acids export 100.0 3.2E-33 7E-38 307.3 25.9 205 840-1066 35-239 (264)
493 PRK14265 phosphate ABC transpo 100.0 1.9E-33 4E-38 312.1 24.1 208 149-396 34-257 (274)
494 PRK14272 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 309.6 23.6 208 148-396 17-235 (252)
495 PRK14261 phosphate ABC transpo 100.0 1.4E-33 3.1E-38 310.2 23.0 211 148-396 19-236 (253)
496 PRK03695 vitamin B12-transport 100.0 1.1E-33 2.3E-38 309.7 21.8 200 150-395 11-220 (248)
497 TIGR02324 CP_lyasePhnL phospho 100.0 1.1E-33 2.4E-38 305.3 21.7 190 842-1042 21-222 (224)
498 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 6.8E-34 1.5E-38 310.0 20.2 206 148-397 16-226 (238)
499 PRK14253 phosphate ABC transpo 100.0 1.2E-33 2.7E-38 310.0 22.2 210 148-395 16-231 (249)
500 COG1123 ATPase components of v 100.0 8.2E-34 1.8E-38 327.1 21.6 210 146-396 302-518 (539)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-191 Score=1723.03 Aligned_cols=1005 Identities=53% Similarity=0.878 Sum_probs=936.1
Q ss_pred cchHHhhhHHHHhcCCChhhhhhccccc-cCCCeeeeeccccChHhhHHHHHHHhhcccCChHHHHHHHHHHHHhcCCCC
Q 001400 19 VEDEEALRWAALERLPTYARARRGIFKN-VVGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLEL 97 (1085)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (1085)
+||||+|+|||+|||||++| +++.+ .++ ++|+.++++.+++.+.++..+..++|+|+++.++|+|++++ ++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 44999999999999999999 55543 222 79999999999999999999999999999999999999998 89
Q ss_pred CCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeecccceeeEeCCeEEEEeCCCCCChhHH
Q 001400 98 PKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTL 177 (1085)
Q Consensus 98 ~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTL 177 (1085)
|.++++++++.++++++.| ||+.|...+..+..+...+.. ++...+||+|+||.++||+|++++||||||||||
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttl 157 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTL 157 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHH
Confidence 9999999999999999876 999999999988877665543 4556789999999999999999999999999999
Q ss_pred HHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhC
Q 001400 178 LLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAG 257 (1085)
Q Consensus 178 L~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~ 257 (1085)
|++|+|.++......|+|+|||++.+++.+++.++|++|+|+|+|+|||||+|+|+++|++++.|++ +..|+|+..
T Consensus 158 lkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~- 233 (1391)
T KOG0065|consen 158 LKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA- 233 (1391)
T ss_pred HHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH-
Confidence 9999999988777789999999999999999999999999999999999999999999999999988 556666542
Q ss_pred CCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCC
Q 001400 258 IKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGL 337 (1085)
Q Consensus 258 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgL 337 (1085)
.++|++++++||++|+||+|||+++||+||||||||+||++++++++++||||+|+||
T Consensus 234 ----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 234 ----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred ----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 2589999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHH
Q 001400 338 DSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQ 417 (1085)
Q Consensus 338 D~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~ 417 (1085)
|++|+.+|+++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||++
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt 371 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLT 371 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcCcccccCCCcccccCCCCCCcHHHHHHHHHHHHHH
Q 001400 418 EVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLL 497 (1085)
Q Consensus 418 ~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 497 (1085)
++++++++.++|.....|+.+.++++|.+.|.+++.++++..+++.++++++.++.++..++|.++.|+|++.|+.|+++
T Consensus 372 ~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~ 451 (1391)
T KOG0065|consen 372 EVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFL 451 (1391)
T ss_pred HhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcc
Q 001400 498 LMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHF 577 (1085)
Q Consensus 498 ~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~ 577 (1085)
+++||.+++++++++.+++|+++|++|+++.+ .+..++..+.|++||++++.+|++++++.++++++|||+|||+..|
T Consensus 452 l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~f 529 (1391)
T KOG0065|consen 452 LMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSF 529 (1391)
T ss_pred HHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccc
Confidence 99999999999999999999999999999985 5556677889999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHH
Q 001400 578 YPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFA 657 (1085)
Q Consensus 578 y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~ 657 (1085)
||+|+++++.+++++|+.++++.+|.+++||++|+.+++++||++++++++.+++++++||+++++++++.+|+++|++.
T Consensus 530 Y~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~ 609 (1391)
T KOG0065|consen 530 YPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGIL 609 (1391)
T ss_pred cChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCCcccccC------------CC---CCcchHHHHHhh
Q 001400 658 MLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKA------------GN---SNFSLGEAILRQ 722 (1085)
Q Consensus 658 ~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~~~~~~~------------~~---~~~~~g~~~l~~ 722 (1085)
++++.+++||+|++.+||+||+|++|++|++|+++++++|||++.+|.|.+ .. ...+.|..+++.
T Consensus 610 ~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g 689 (1391)
T KOG0065|consen 610 LLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSG 689 (1391)
T ss_pred HHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEec
Confidence 999999999999999999999999999999999999999999999999972 12 135778889988
Q ss_pred cCCC-----CCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhh-cCcchhHHHHhhhhccc
Q 001400 723 RSLF-----PESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRR-KGENVVIELREYLQRSS 796 (1085)
Q Consensus 723 ~~~~-----~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 796 (1085)
+++. +..+|+|+++|+++||.++|+++..+++.|+++..+.+..+..++..++.... ...... .+.
T Consensus 690 ~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~ 761 (1391)
T KOG0065|consen 690 RDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAGSSSE--------IEK 761 (1391)
T ss_pred ccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhcccccc--------ccc
Confidence 8887 78899999999999999999999999999999998888877665433221111 000000 000
Q ss_pred ccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhh
Q 001400 797 SLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLA 876 (1085)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~ 876 (1085)
.......+.+++++|+.|.+++++|+.|.+|+|.+++.+| +++++|+|||+.++||.++||||+|||||||||++|+
T Consensus 762 ~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA 838 (1391)
T KOG0065|consen 762 LDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLA 838 (1391)
T ss_pred cccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHh
Confidence 0011111456789999999999999999999999998877 7889999999999999999999999999999999999
Q ss_pred CCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc
Q 001400 877 GRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL 956 (1085)
Q Consensus 877 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 956 (1085)
||+++|.++|+|.|||+|+.+..|+|.+|||+|+|+|.+.+||+|+|.|+|++|+|++++.+++.+++|++++.++|.++
T Consensus 839 ~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~ 918 (1391)
T KOG0065|consen 839 GRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY 918 (1391)
T ss_pred cCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhcCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHh
Q 001400 957 SGALIGLPGINGLSTEQRKRLTIAVELVANP-SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES 1035 (1085)
Q Consensus 957 ~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p-~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~ 1035 (1085)
+|.++|.|| ++||++|||||+||++|++|| .||||||||||||++++..|++++|+++++|+|||||+||||.++++.
T Consensus 919 ~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~ 997 (1391)
T KOG0065|consen 919 ADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEA 997 (1391)
T ss_pred hhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHH
Confidence 999999999 899999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEecCcEEEEecCCCCchHHHHHHHHhccccccCCcc
Q 001400 1036 FDELLFMKRGGELIYAGPLGSKSCELIKYFEVESFMFKSPRI 1077 (1085)
Q Consensus 1036 ~d~il~l~~gG~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 1077 (1085)
||++++|++||++||+||+|++++++++|||+++|++++++.
T Consensus 998 FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~~~~~~ 1039 (1391)
T KOG0065|consen 998 FDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVKCISDE 1039 (1391)
T ss_pred HhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCccCCCCC
Confidence 999999999999999999999999999999999999977654
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=6.3e-176 Score=1702.78 Aligned_cols=1072 Identities=60% Similarity=1.009 Sum_probs=949.2
Q ss_pred ccccccCCCC-C---CCcchHHhhhHHHHhcCCChhhhhhcccccc-----CCC---eeeeeccccChHhhHHHHHHHhh
Q 001400 6 ENVFSRTSSF-R---DEVEDEEALRWAALERLPTYARARRGIFKNV-----VGD---VKEVDVSELAVQEQRLVLDRLVN 73 (1085)
Q Consensus 6 ~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~ 73 (1085)
+++|++.+.. + ..|||||+|+|||+||||||+|+|++++... .|+ ..++|+++|+.++++.+++++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (1470)
T PLN03140 24 EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFK 103 (1470)
T ss_pred hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHHHHHhhhc
Confidence 6788664322 2 3678999999999999999999999999653 122 23699999999999999999999
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeeccc
Q 001400 74 AVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDD 153 (1085)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 153 (1085)
++++|+++|++++++|.+++|+++|++||||+||+|++++.++++.+||++|.+.+.++.+...++....++.+++||+|
T Consensus 104 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~ 183 (1470)
T PLN03140 104 VAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKD 183 (1470)
T ss_pred ccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccC
Confidence 99999999999999999999999999999999999999999999999999999999888766544332334456789999
Q ss_pred ceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHHHHh
Q 001400 154 LSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFA 233 (1085)
Q Consensus 154 vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~ 233 (1085)
+|+.|+|||+++|+||||||||||||+|+|+++++..++|+|+|||+++++..+++.++||+|+|.|++++||+|||.|+
T Consensus 184 vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~ 263 (1470)
T PLN03140 184 ASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFS 263 (1470)
T ss_pred CeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHH
Confidence 99999999999999999999999999999999887678999999999987776778899999999999999999999999
Q ss_pred hhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhhhh
Q 001400 234 GQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKK 313 (1085)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkq 313 (1085)
++|++.+.++++..+..++++..++.|+.++|.+|++....+.+.+..++++|+.+||++|+||.||++++++|||||||
T Consensus 264 a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerk 343 (1470)
T PLN03140 264 ARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKK 343 (1470)
T ss_pred HHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccce
Confidence 99988777666666666777777788888999999998888877788899999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEecChh
Q 001400 314 RLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRV 393 (1085)
Q Consensus 314 Rvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G~~~ 393 (1085)
||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+||++
T Consensus 344 RVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~ 423 (1470)
T PLN03140 344 RVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRD 423 (1470)
T ss_pred eeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHH
Confidence 99999999999999999999999999999999999999988667899999999999999999999999999999999999
Q ss_pred hHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcCcccccCCCcc
Q 001400 394 SVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPA 473 (1085)
Q Consensus 394 ~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1085)
++.+||+++||+||+++|+|||+++++++++++++|.....|+++.++++|+++|++++.++.+.+++..+.++...++.
T Consensus 424 ~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 503 (1470)
T PLN03140 424 HILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKA 503 (1470)
T ss_pred HHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccc
Confidence 99999999999999999999999999999888788877677888889999999999999888888887777666555666
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHHHHHHHHHHHHH
Q 001400 474 ALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILF 553 (1085)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~ 553 (1085)
....++|..++++|++.|++|++++++||+..+++++++.+++|+++|++||+++++..+..++..+.|++||++++.++
T Consensus 504 ~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~ 583 (1470)
T PLN03140 504 ALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMF 583 (1470)
T ss_pred cccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 66667899999999999999999999999999999999999999999999999987765556778889999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHHHHHHHHHHHHH
Q 001400 554 NGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMS 633 (1085)
Q Consensus 554 ~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~ 633 (1085)
++++++..++.+||||+|||+..||++|+|+++++++++|+.++++++|++++|||+|+.+++.+||.+++++++.++++
T Consensus 584 ~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~ 663 (1470)
T PLN03140 584 NGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMA 663 (1470)
T ss_pred HHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCCcccccC-CCCC
Q 001400 634 IGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKA-GNSN 712 (1085)
Q Consensus 634 ~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~~~~~~~-~~~~ 712 (1085)
.++|++++++++++.+|+++++++++++++|+||++++++||+||+|++|+||++|+++++++|||.+..|.+.. .+..
T Consensus 664 ~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~ 743 (1470)
T PLN03140 664 AGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNS 743 (1470)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998886432 2335
Q ss_pred cchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcC-------cch-
Q 001400 713 FSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKG-------ENV- 784 (1085)
Q Consensus 713 ~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~- 784 (1085)
...|+.+|+.+++...+.|+|++++++++|+++|+++++++++|.++..........+........... ++.
T Consensus 744 ~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (1470)
T PLN03140 744 TRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGN 823 (1470)
T ss_pred cccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcccccccccccccccc
Confidence 678999999999999999999999999999999999999999999876655444332211100000000 000
Q ss_pred h---HHH---H-hhh---hcccc--cCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEE
Q 001400 785 V---IEL---R-EYL---QRSSS--LNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAF 852 (1085)
Q Consensus 785 ~---~~~---~-~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i 852 (1085)
. ... . ... ..... ......+.+++.+|+.|.+++|+|++|.++++.+.++.+..++++++|+|||+++
T Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i 903 (1470)
T PLN03140 824 NTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAF 903 (1470)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEE
Confidence 0 000 0 000 00000 0001123456778999999999999999999888777776667788999999999
Q ss_pred eCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC
Q 001400 853 RPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLP 932 (1085)
Q Consensus 853 ~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~ 932 (1085)
+||+++||+|||||||||||++|+|+.++|..+|+|.++|++.....+++.+|||+|+|.+++.+||+|+|.|++.++.+
T Consensus 904 ~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~ 983 (1470)
T PLN03140 904 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLP 983 (1470)
T ss_pred ECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCC
Confidence 99999999999999999999999999876678999999999876556678899999999999999999999999888776
Q ss_pred CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 001400 933 SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1085)
Q Consensus 933 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~ 1012 (1085)
.....+++.+.++++++.++|.++.+..++.+++++|||||||||+||++|+.+|+||||||||||||+.++..+++.|+
T Consensus 984 ~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~ 1063 (1470)
T PLN03140 984 KEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR 1063 (1470)
T ss_pred CCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 55555566678999999999999999998887778999999999999999999999999999999999999999999999
Q ss_pred HHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCchHHHHHHHHhccccccCCcc
Q 001400 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEVESFMFKSPRI 1077 (1085)
Q Consensus 1013 ~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 1077 (1085)
+++++|+|||||+|||+.++++.||++++|++||+++|.|+.+++++++++|||+++|+|+||+.
T Consensus 1064 ~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~ 1128 (1470)
T PLN03140 1064 NTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEK 1128 (1470)
T ss_pred HHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCC
Confidence 99988999999999999778899999999998899999999999999999999999999888764
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.8e-136 Score=1340.78 Aligned_cols=955 Identities=32% Similarity=0.518 Sum_probs=771.2
Q ss_pred CChHHHHHHHHHHHHhcCCCCC--CcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeecccc
Q 001400 77 DDPERFFDRMRKRCEAVDLELP--KIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDL 154 (1085)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 154 (1085)
.|++++++.++++.++.+...| +++|+|+||+|++ ...+...+||+.|.+.+........+. ..+++.+++||+|+
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 5677788776666666666555 9999999999999 445666789999998887654433321 12334567899999
Q ss_pred eeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC-CceeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCCHHHHHH
Q 001400 155 SGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMTVRETLD 231 (1085)
Q Consensus 155 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1085)
|+.++|||+++|+||||||||||||+|+|++.+. .+.+|+|.|||+++.+.. .++.++||+|+|.|++.+||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 9999999999999999999999999999987432 236999999999875432 3456999999999999999999999
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhh
Q 001400 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1085)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1085)
|+++++.+..+.... .+.++ .+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~~~---~~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPDGV---SREEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCCCC---CHHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 998876432111000 00000 0123577899999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEecC
Q 001400 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1085)
Q Consensus 312 kqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G~ 391 (1085)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999876678899999999999999999999999999999999
Q ss_pred hhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcCccccc---
Q 001400 392 RVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRR--- 468 (1085)
Q Consensus 392 ~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 468 (1085)
++++.+||+++||.||++.|+|||+++++++.++ +++... +.....++++++++|+++..++++.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~-e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGY-EKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccc-cccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999986543 222211 11123468899999999887766655543321110
Q ss_pred ------------CCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccc
Q 001400 469 ------------FNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDD 536 (1085)
Q Consensus 469 ------------~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~ 536 (1085)
...+.....++|..+++.|+..|++|+++.++||+..+..++++.+++|+++|++||+++.+. .+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hh
Confidence 000112234568889999999999999999999999999999999999999999999987543 23
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccH
Q 001400 537 GGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNV 616 (1085)
Q Consensus 537 ~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~ 616 (1085)
.....|++||++++.++.++.++..++.+||+|+|||..++|++++|++++++.++|+.++.+++|++++|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 45668999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHH
Q 001400 617 VRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASV 696 (1085)
Q Consensus 617 ~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~ 696 (1085)
.+||.+++++++...++.++++++++++++..+|+.+++++++++++|+||++++++||+||+|++|+||+.|+++++++
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCcccccC--C----------------------CCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 001400 697 NEFLGHSWDKKA--G----------------------NSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTF 752 (1085)
Q Consensus 697 nef~~~~~~~~~--~----------------------~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~ 752 (1085)
|||.+..+.|.. + +.....|+++|+. .+.....|+|.+++++++|+++|.++..+
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999998887631 0 0124578899985 34445568999999999999999999999
Q ss_pred HHHhcCCCCCcccccchhhhh--h-HhhhhcCcchhHHHHhhhhcccccCCccccc--CCccccc--ccceeeeccceee
Q 001400 753 FLSYLNPLGKQQAVVSKKELQ--E-RDRRRKGENVVIELREYLQRSSSLNGKYFKQ--KGMVLPF--QPLSMAFGNINYF 825 (1085)
Q Consensus 753 ~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~y~ 825 (1085)
+++|.++.............. . .......+......++.............+. .....|. ....+.++|++|.
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~ 768 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTYE 768 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEEE
Confidence 999988554332221111100 0 0000000000000000000000000000000 0000000 1124677887776
Q ss_pred eeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC-eeeeEEEEcCccCChhcccceE
Q 001400 826 VDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQETFARIS 904 (1085)
Q Consensus 826 v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~ 904 (1085)
++.. .+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ +.+|+|.+||++... .+++.+
T Consensus 769 ~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i 838 (1394)
T TIGR00956 769 VKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSI 838 (1394)
T ss_pred ecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcce
Confidence 5321 13467999999999999999999999999999999999987543 457999999998753 467889
Q ss_pred EEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHh
Q 001400 905 GYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV 984 (1085)
Q Consensus 905 gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~ 984 (1085)
|||+|++.+++.+||+|++.|++.++.+......++.+.++++++.+++.++.|..++.++. +|||||||||+||+||+
T Consensus 839 ~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~ 917 (1394)
T TIGR00956 839 GYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELV 917 (1394)
T ss_pred eeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHH
Confidence 99999999999999999999998888765555556667899999999999999988876543 79999999999999999
Q ss_pred cCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCchHHHHH
Q 001400 985 ANPS-IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIK 1063 (1085)
Q Consensus 985 ~~p~-illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~~~~~~~ 1063 (1085)
.+|+ ||||||||||||+.++..+++.|++++++|+|||||+|||+..+++.||++++|++||+++|.|+.+++++++++
T Consensus 918 ~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~ 997 (1394)
T TIGR00956 918 AKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIIN 997 (1394)
T ss_pred cCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHH
Confidence 9997 999999999999999999999999998889999999999996667889999999988899999999999999999
Q ss_pred HHHhccccccCCcc
Q 001400 1064 YFEVESFMFKSPRI 1077 (1085)
Q Consensus 1064 ~~~~~~g~~~~~~~ 1077 (1085)
||+++ |.++||+-
T Consensus 998 yf~~~-G~~~~p~~ 1010 (1394)
T TIGR00956 998 YFEKH-GAPKCPED 1010 (1394)
T ss_pred HHHhc-CCCCCCCC
Confidence 99975 88667764
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-82 Score=768.57 Aligned_cols=585 Identities=30% Similarity=0.484 Sum_probs=491.9
Q ss_pred CCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeecccceeeEeCCeEEEEeCCCCCChhH
Q 001400 97 LPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTT 176 (1085)
Q Consensus 97 ~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 176 (1085)
...++++|+|+++++... .+..+++|+||||.++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 346889999999987631 113468999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHh
Q 001400 177 LLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIA 256 (1085)
Q Consensus 177 LL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 256 (1085)
||++|+|+.+....++|+|++||++.+....++.+|||.|+|.++|++||+|+|.|+|+++.+... ..
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~-------~~----- 139 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSL-------SK----- 139 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCC-------CH-----
Confidence 999999999876678999999998887777788999999999999999999999999998765421 11
Q ss_pred CCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCC
Q 001400 257 GIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNG 336 (1085)
Q Consensus 257 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsg 336 (1085)
++.+.+|+++++.|||.+|+||+||+...||+||||||||+||..|+.+|+||||||||||
T Consensus 140 -------------------~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 140 -------------------EEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -------------------HHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 1224579999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHH
Q 001400 337 LDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1085)
Q Consensus 337 LD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl 416 (1085)
||+.++.++++.|+++|+. |+|+|+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcCcccccCCCcccccCCCCCCcHHHHHHHHHHHHH
Q 001400 417 QEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQL 496 (1085)
Q Consensus 417 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 496 (1085)
.++.+..++...... ..........++......+............ .........++|.|+..+++|.+
T Consensus 280 l~l~s~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~q~~~L~~R~~ 348 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEE------AVRIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGTSPSWWTQFKILLKRSL 348 (613)
T ss_pred HHHHccCCCchhHHh------HHHHHHHhhhccccchhhhhHHHHhhhcccc-----cccccccCCcHHHHHHHHHHHHh
Confidence 998874311000000 0000000111110000000000000000000 00001116789999999999999
Q ss_pred HHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhhhhhhcC
Q 001400 497 LLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFT-EVSMLVAKLPVLYKHRDL 575 (1085)
Q Consensus 497 ~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~-~~~~~~~~~~v~~k~r~~ 575 (1085)
....|++.++..|.++.+++++++|.+||+.+.+... .....|++||.+.+..+..+. .+..+..++++|.||+..
T Consensus 349 ~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~---~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~ 425 (613)
T KOG0061|consen 349 KNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKG---IQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETSS 425 (613)
T ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHH---HHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhc
Confidence 9999999999999999999999999999998654332 225578888888887666655 688999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHH
Q 001400 576 HFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGS 655 (1085)
Q Consensus 576 ~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~ 655 (1085)
++|+.++|++++.+.++|+.++.+++|.+++|||+|+.++..+|+.++++.++...++.+++.+++++.++...|.++++
T Consensus 426 ~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~ 505 (613)
T KOG0061|consen 426 GLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLGP 505 (613)
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCCcccccCC--CCCcchHHHHHhhcCCCCCCcchH
Q 001400 656 FAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAG--NSNFSLGEAILRQRSLFPESYWYW 733 (1085)
Q Consensus 656 ~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~~~~~~~~--~~~~~~g~~~l~~~~~~~~~~~~w 733 (1085)
+.++.+++++||+++.+.||.||.|+.|+|+..|+++++..|+|.+....|... ..+...+..+++..++...+ .|
T Consensus 506 ~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~ 583 (613)
T KOG0061|consen 506 VLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS--FW 583 (613)
T ss_pred HHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc--cc
Confidence 999999999999999999999999999999999999999999998733333222 34567888999988886654 58
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Q 001400 734 IGVGAMLGYTLLFNALFTFFLSYLN 758 (1085)
Q Consensus 734 ~~~g~ll~~~~~f~~l~~~~l~~~~ 758 (1085)
.++.+++++.++|.++.++++.+..
T Consensus 584 ~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 584 LDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8999999999999999999998754
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.6e-81 Score=769.92 Aligned_cols=569 Identities=24% Similarity=0.403 Sum_probs=479.6
Q ss_pred CcceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCC
Q 001400 145 RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 145 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 224 (1085)
+.++++|+|+|+.++|||+++|+|||||||||||++|+|+.++....+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34578999999999999999999999999999999999998765456899999999876544567899999999999999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc-
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM- 303 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 303 (1085)
||+|||.|+++++.+..... . +.+.+++++++.|||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~~~-------~------------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVTK-------K------------------------EKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCCH-------H------------------------HHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 99999999987764321100 0 112358999999999999999999864
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
.++|||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++. +.|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~~-g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQK-GKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 6899999999999999999999999999999999999999999999999864 789999999999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcC
Q 001400 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1085)
Q Consensus 384 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1085)
|+++|+|+++++.+||+++||+||++.|+|||+.++.+....... . .....+++.+.|+.+...++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998865322110 0 011234455666555444433322221
Q ss_pred ccccc--C-CCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhH
Q 001400 464 PFDRR--F-NHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLY 540 (1085)
Q Consensus 464 ~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~ 540 (1085)
..... . ..........+..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. ......
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 11100 0 00011122456788999999999999999999999999999999999999999999986433 233445
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHH
Q 001400 541 LGALYFSMVIILFNGF-TEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRF 619 (1085)
Q Consensus 541 ~g~lf~~l~~~~~~~~-~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f 619 (1085)
.|++|+.++..++..+ ..+..+..+|++|+||+..++|++++|++++.+.++|+.++.+++|.+++|||+|+.+++.+|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7889999888877765 456677789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhh
Q 001400 620 SRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEF 699 (1085)
Q Consensus 620 ~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef 699 (1085)
+.+++++++...++.+++.++++++++..+|..+++++.+++++|+||+++.++||+||+|++|+||+.|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-cccCCCC---CcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001400 700 LGHSW-DKKAGNS---NFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYL 757 (1085)
Q Consensus 700 ~~~~~-~~~~~~~---~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~ 757 (1085)
.+..+ .|...+. +...|+.+++.+++... ++|.+++++++++++|.++.+++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88765 3322111 23458999999988764 459999999999999999999999874
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.2e-80 Score=760.61 Aligned_cols=607 Identities=22% Similarity=0.324 Sum_probs=469.2
Q ss_pred CCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHH--HHHHHhHhcCCCcceeecccceeeEeCCeEEEEeCCCCCCh
Q 001400 97 LPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEA--LLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGK 174 (1085)
Q Consensus 97 ~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 174 (1085)
.++++++|+|+++.+.......+...+ .+.... -..++.. ...++++|+|+|++++|||+++|+|||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~---~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGK 107 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSNI----KRILGHKPKISDETR---QIQERTILNGVTGMASPGEILAVLGPSGSGK 107 (659)
T ss_pred CCceEEEEEeEEEEEccCCCccccccc----ccccccccccccccc---cCCCCeeeeCCEEEEECCEEEEEECCCCCCH
Confidence 357999999999997643111111111 111000 0011111 1124579999999999999999999999999
Q ss_pred hHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHH
Q 001400 175 TTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREK 254 (1085)
Q Consensus 175 STLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~ 254 (1085)
||||++|+|++++. ..+|+|.+||+++... ..+.++||+|++.+++.+||+||+.|++.++.+... ...
T Consensus 108 STLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~-------~~~-- 176 (659)
T PLN03211 108 STLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL-------TKQ-- 176 (659)
T ss_pred HHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC-------CHH--
Confidence 99999999998763 3599999999987532 235699999999999999999999998765422110 000
Q ss_pred HhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCC
Q 001400 255 IAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEIS 334 (1085)
Q Consensus 255 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEpt 334 (1085)
+...+++++++.+||++++||.||+...++|||||||||+||++|+.+|+||||||||
T Consensus 177 ----------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPt 234 (659)
T PLN03211 177 ----------------------EKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPT 234 (659)
T ss_pred ----------------------HHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCC
Confidence 0123478899999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEecChhhHHHHHHhCCCCCCCCCChhH
Q 001400 335 NGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVAD 414 (1085)
Q Consensus 335 sgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad 414 (1085)
+|||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++||.||++.||||
T Consensus 235 sgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpAD 313 (659)
T PLN03211 235 SGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPAD 313 (659)
T ss_pred CCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHH
Confidence 99999999999999999986 47888888888888899999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcCc-ccc--cC-----CCcc-cccCCCCCCcHH
Q 001400 415 FLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVP-FDR--RF-----NHPA-ALSTSKYGEKRS 485 (1085)
Q Consensus 415 fl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~-----~~~~-~~~~~~~~~~~~ 485 (1085)
|+.++.+...+.........+ .....+.+.|+.... +......... ... .. ..+. ......+..+++
T Consensus 314 f~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 389 (659)
T PLN03211 314 FLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWF 389 (659)
T ss_pred HHHHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHH
Confidence 999998754321100000001 011233334432111 1111110000 000 00 0000 001122456899
Q ss_pred HHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHHHHHHHHHHHHH-HHHHHHHHHHh
Q 001400 486 ELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILF-NGFTEVSMLVA 564 (1085)
Q Consensus 486 ~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~-~~~~~~~~~~~ 564 (1085)
.|+..+++|.+.. +|+..+...|+++.+++|+++|++||+.+ ..+.+...|++||++++.++ ..+..+..+..
T Consensus 390 ~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~ 463 (659)
T PLN03211 390 NQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQ 463 (659)
T ss_pred HHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887 78888888999999999999999999874 22345668999998777654 55678888889
Q ss_pred hhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHcc
Q 001400 565 KLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLG 644 (1085)
Q Consensus 565 ~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~ 644 (1085)
+|++|+|||..++|++++|++++++.++|+.++.+++|.+++|||+|+.+++.+|+.+++++++...++.+++.++++++
T Consensus 464 er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~ 543 (659)
T PLN03211 464 ERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAI 543 (659)
T ss_pred hhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCCcc-----cccCCCCCcchHHHH
Q 001400 645 RNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSW-----DKKAGNSNFSLGEAI 719 (1085)
Q Consensus 645 ~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~~~-----~~~~~~~~~~~g~~~ 719 (1085)
++..+|+++++++++++++|+||+++ +||+||+|++|+||+.|+++++++|||.+.+. .|..+.+....+..+
T Consensus 544 ~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~ 621 (659)
T PLN03211 544 MDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKF 621 (659)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCcc
Confidence 99999999999999999999999997 79999999999999999999999999976432 232211100011112
Q ss_pred HhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001400 720 LRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLN 758 (1085)
Q Consensus 720 l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~ 758 (1085)
+....+. ....|.+++++++++++|.++.++++++.+
T Consensus 622 ~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 622 VEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred chhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2222222 234788999999999999999999997654
No 7
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.6e-79 Score=795.40 Aligned_cols=597 Identities=23% Similarity=0.384 Sum_probs=496.2
Q ss_pred CCCCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeecccceeeEeCCeEEEEeCCCCCCh
Q 001400 95 LELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGK 174 (1085)
Q Consensus 95 ~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 174 (1085)
++...+.+.|+||+|+++...+.+. ....+.++.+|+|||+.++||++++|+|||||||
T Consensus 861 ~~~~~~~~~~~~v~y~v~~~~~~~~---------------------~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGK 919 (1470)
T PLN03140 861 LPFTPLAMSFDDVNYFVDMPAEMKE---------------------QGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGK 919 (1470)
T ss_pred cCCCcceEEEEEEEEEEccCccccc---------------------cccCcCCceEeeCcEEEEECCeEEEEECCCCCCH
Confidence 3455678999999999864311000 0111234579999999999999999999999999
Q ss_pred hHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHH
Q 001400 175 TTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREK 254 (1085)
Q Consensus 175 STLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~ 254 (1085)
||||++|+|+.++. ..+|+|.+||++.++...++.+|||+|+|.|++.+||+|||.|++.++.+... ...
T Consensus 920 TTLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~-------~~~-- 989 (1470)
T PLN03140 920 TTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEV-------SKE-- 989 (1470)
T ss_pred HHHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCC-------CHH--
Confidence 99999999986542 46899999998875444457799999999999999999999998765422110 000
Q ss_pred HhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCC
Q 001400 255 IAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEIS 334 (1085)
Q Consensus 255 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEpt 334 (1085)
+....++++++.+||.+++|+.||+..+++|||||||||+||++|+.+|++|||||||
T Consensus 990 ----------------------~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPT 1047 (1470)
T PLN03140 990 ----------------------EKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPT 1047 (1470)
T ss_pred ----------------------HHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCC
Confidence 0123488999999999999999998878899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC-CeEEEecCh----hhHHHHHHhC-CC-CCC
Q 001400 335 NGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE-GQIVYQGPR----VSVLDFFASM-GF-SCP 407 (1085)
Q Consensus 335 sgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~-G~iv~~G~~----~~~~~~f~~~-G~-~~p 407 (1085)
+|||+.++..+++.|+++++. ++|+|+++||+..+++++||++++|++ |+++|+|+. +++.+||+++ |+ +||
T Consensus 1048 sgLD~~~a~~v~~~L~~l~~~-g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p 1126 (1470)
T PLN03140 1048 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIK 1126 (1470)
T ss_pred CCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCC
Confidence 999999999999999999864 788899999988889999999999996 899999996 6899999998 66 599
Q ss_pred CCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcCcccccCCCcccccCCCCCCcHHHH
Q 001400 408 KRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSEL 487 (1085)
Q Consensus 408 ~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1085)
++.|||||+.++++..... ....++++.|+.+...++..+............+......+|..+++.|
T Consensus 1127 ~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 1194 (1470)
T PLN03140 1127 EKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQ 1194 (1470)
T ss_pred CCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHH
Confidence 9999999999997643211 0123678888887766555443321111000111111235688999999
Q ss_pred HHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHHHHHHHHHHHHHHHHHH-HHHHHhhh
Q 001400 488 LKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTE-VSMLVAKL 566 (1085)
Q Consensus 488 ~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~-~~~~~~~~ 566 (1085)
+..|++|+++.++|++.++..|+++.+++|+++|++||+.+.+..+.++.+...|++|+++++..++.+.. ++.+..+|
T Consensus 1195 ~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR 1274 (1470)
T PLN03140 1195 FKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVER 1274 (1470)
T ss_pred HHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998655555555566899999888877766544 46677799
Q ss_pred hhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHcccC
Q 001400 567 PVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRN 646 (1085)
Q Consensus 567 ~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~ 646 (1085)
++|+|||..++|++++|++++++.++|+.++.+++|.+++|||+||.+++..|+.++++.++...++.+++.++++++++
T Consensus 1275 ~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~ 1354 (1470)
T PLN03140 1275 TVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPN 1354 (1470)
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCCcccccCCCC-CcchHHHH-HhhcC
Q 001400 647 MIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAGNS-NFSLGEAI-LRQRS 724 (1085)
Q Consensus 647 ~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~~~~~~~~~~-~~~~g~~~-l~~~~ 724 (1085)
..+|..+++++..++++|+||+++++.||.||+|+||+||+.|++++++.|||.+....+.+++. +...+.++ +..+|
T Consensus 1355 ~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g 1434 (1470)
T PLN03140 1355 QQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYG 1434 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999887765554431 12345454 66778
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 001400 725 LFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNP 759 (1085)
Q Consensus 725 ~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~ 759 (1085)
+.. .|.|.+++++++|+++|.+++.+++++++.
T Consensus 1435 ~~~--~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1435 YDP--DFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred cCc--ccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 764 467899999999999999999999999875
No 8
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.9e-75 Score=709.40 Aligned_cols=782 Identities=19% Similarity=0.243 Sum_probs=406.5
Q ss_pred CCCcceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCC
Q 001400 143 GNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW 219 (1085)
Q Consensus 143 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~ 219 (1085)
+.+++..||+|+|+.|++|+.++|+|||||||||+++.|.+.++|. +|+|.++|.++.++.. +.++|.|+|+|.
T Consensus 361 PsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePv 437 (1228)
T KOG0055|consen 361 PSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPV 437 (1228)
T ss_pred CCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechh
Confidence 3445778999999999999999999999999999999999999987 9999999999987753 578999999997
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1085)
+|. .||+|||.|+-. ....+.+.++++.. + ..+. +..|++.+||.|
T Consensus 438 lF~-~tI~eNI~~G~~----dat~~~i~~a~k~a---n-----------------------a~~f---i~~lp~g~~T~v 483 (1228)
T KOG0055|consen 438 LFA-TTIRENIRYGKP----DATREEIEEAAKAA---N-----------------------AHDF---ILKLPDGYDTLV 483 (1228)
T ss_pred hhc-ccHHHHHhcCCC----cccHHHHHHHHHHc---c-----------------------HHHH---HHhhHHhhcccc
Confidence 655 699999998631 11111112222110 0 0122 345888999999
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
|++++ +|||||||||+|||||+.+|+|||||||||+||+.+...+.+.|.+..+ |+|+|+ +.|..+.+-+ +|+|+
T Consensus 484 ge~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTiv-VaHRLStIrn-aD~I~ 558 (1228)
T KOG0055|consen 484 GERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIV-VAHRLSTIRN-ADKIA 558 (1228)
T ss_pred cCCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEE-Eeeehhhhhc-cCEEE
Confidence 98766 5999999999999999999999999999999999999999999998754 667777 5677777766 99999
Q ss_pred EecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHH--HhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccch
Q 001400 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL--QEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNL 457 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (1085)
+|++|+|++.|+++|++.. ..-.++.+ |+.....+. ..+..... .+.....+.+......
T Consensus 559 v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~~~~~~-------~~~~~s~~~s~~~~~~ 620 (1228)
T KOG0055|consen 559 VMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEEEESLK-------EERSRSLKSSSSSPSL 620 (1228)
T ss_pred EEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-cccccchh-------hhhhhccccccccccc
Confidence 9999999999999999862 11112222 122221111 00000000 0000000000000000
Q ss_pred hhhh-cCcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHH-------HHHHHHHHHh---cC
Q 001400 458 SEEL-AVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLL-------IVALITMTVF---FR 526 (1085)
Q Consensus 458 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~-------~~ali~g~vf---~~ 526 (1085)
.... .........+.... ..+. ..+.....+.|-+...+.++.+.+...+..+ +.+.+++.++ +.
T Consensus 621 ~~~~~~~~~~~~~~~~e~~-~~~~---~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~ 696 (1228)
T KOG0055|consen 621 SRGSNRSNLLSVKPEGEDP-EEPV---SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYP 696 (1228)
T ss_pred cCCcccccccccccccccc-cccc---ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 0000 00000000000000 0000 0000112233333333444444333333222 2333333332 22
Q ss_pred CCCCCCccccchhHHHHHHHHHHHHHH----------HHHHHHHHHHhhhhhhhh--hhcCcccchHH--HHHH-HHHHH
Q 001400 527 TTMHHKTIDDGGLYLGALYFSMVIILF----------NGFTEVSMLVAKLPVLYK--HRDLHFYPSWV--YTIP-SWALS 591 (1085)
Q Consensus 527 ~~~~~~~~~~~~~~~g~lf~~l~~~~~----------~~~~~~~~~~~~~~v~~k--~r~~~~y~~~a--y~l~-~~~~~ 591 (1085)
.+. +........+..+|.++....+ .-+.+....-.+...|.+ ..+..||.--- -.+. ....+
T Consensus 697 ~~~--~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~D 774 (1228)
T KOG0055|consen 697 PDD--DELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATD 774 (1228)
T ss_pred CCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcc
Confidence 221 1111112224445544433221 112221111122222222 12333432111 1111 11111
Q ss_pred H---------HHHHHHHHHHhhhhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHcccCHHH---------HHHH
Q 001400 592 I---------PTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIV---------ANTF 653 (1085)
Q Consensus 592 i---------P~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~v---------a~~~ 653 (1085)
. .++.+-..+-.+++-..++|...+.--+.-+.+.-++........+++......... ...+
T Consensus 775 a~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai 854 (1228)
T KOG0055|consen 775 ASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAV 854 (1228)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 1 111111111111111111111000000000000001111111111222221111110 0001
Q ss_pred HHHHHHHHHHHhhccccC---CCchhH--HHHhHhhcHHHHHHHHHHHhhhcCCcccccCCCCCcchHHHHHhhcCCCCC
Q 001400 654 GSFAMLVVMALGGFIISR---DSIPKW--WIWGFWVSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPE 728 (1085)
Q Consensus 654 ~~~~~l~~~l~~Gf~i~~---~~ip~~--~~w~~~isp~~y~~~a~~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~ 728 (1085)
..+=.+..+..-..++.. ..-+++ ..+--+++-+.|++....+--..+. .+..|......-.+.+.
T Consensus 855 ~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~---------~f~~G~~Li~~g~~~~~ 925 (1228)
T KOG0055|consen 855 SNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYAL---------SFWYGARLISNGEMTFE 925 (1228)
T ss_pred HhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHhHHHHhcCCcCHH
Confidence 111000000000000000 000000 0111112222222211110000000 00000000000000000
Q ss_pred CcchHHHHHHHHHH-HHHHHH-HHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcchhHHHHhhhhcccccCCcccccC
Q 001400 729 SYWYWIGVGAMLGY-TLLFNA-LFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQK 806 (1085)
Q Consensus 729 ~~~~w~~~g~ll~~-~~~f~~-l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (1085)
. ++-.| ++.|.. ....+..|.....+..... ...-....+.+..++.. ..
T Consensus 926 ~--------~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa------------------~~iF~i~dr~~~i~~~~--~~ 977 (1228)
T KOG0055|consen 926 D--------VFRVFMALSFTAMALGQASSYAPDISKAKIAA------------------GSIFEILDRKPTIDPDS--TS 977 (1228)
T ss_pred H--------HHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHH------------------HHHHHHhcCCCCCCCCC--CC
Confidence 0 00000 001100 1111122221111000000 00000000000000000 11
Q ss_pred CcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeee
Q 001400 807 GMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEG 886 (1085)
Q Consensus 807 ~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G 886 (1085)
+...+-..-.+.|+|+.+.++.. ++.++|+|+|++|++|+.+||||||||||||.+.+|-+... +..|
T Consensus 978 ~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~G 1045 (1228)
T KOG0055|consen 978 GGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDAG 1045 (1228)
T ss_pred CCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCC
Confidence 11222223357888888888643 56789999999999999999999999999999999987655 6799
Q ss_pred EEEEcCccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcC-------CCcc
Q 001400 887 DIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-------LTSL 956 (1085)
Q Consensus 887 ~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~ 956 (1085)
.|.|||++++. ...|+++|.|.|+|.+|. -|++||+.|+. . +++. +.+.++.+..+ |.+-
T Consensus 1046 ~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~--~---~vs~----~eIi~Aak~ANaH~FI~sLP~G 1115 (1228)
T KOG0055|consen 1046 KVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS--E---EVSE----EEIIEAAKLANAHNFISSLPQG 1115 (1228)
T ss_pred eEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC--C---CCCH----HHHHHHHHHhhhHHHHhcCcCc
Confidence 99999998764 457889999999999985 59999999981 1 1222 12333333332 3333
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhc
Q 001400 957 SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESF 1036 (1085)
Q Consensus 957 ~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~ 1036 (1085)
.|..+|..| .+||||||||++||||+++||+||||||+||+||.++.+.|+++|++. ..|+|.|+|+|+++ .++.+
T Consensus 1116 yDT~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a-~~gRT~IvIAHRLS--TIqna 1191 (1228)
T KOG0055|consen 1116 YDTRVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRA-MEGRTTIVIAHRLS--TIQNA 1191 (1228)
T ss_pred ccCccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh-hcCCcEEEEecchh--hhhcC
Confidence 455555444 479999999999999999999999999999999999999999999996 47999999999986 67889
Q ss_pred CEEEEEecCcEEEEecCC
Q 001400 1037 DELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 1037 d~il~l~~gG~~~~~g~~ 1054 (1085)
|.|.|++ +|++++.|.-
T Consensus 1192 D~I~Vi~-~G~VvE~GtH 1208 (1228)
T KOG0055|consen 1192 DVIAVLK-NGKVVEQGTH 1208 (1228)
T ss_pred CEEEEEE-CCEEEecccH
Confidence 9999998 5799999873
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.8e-77 Score=724.40 Aligned_cols=559 Identities=26% Similarity=0.386 Sum_probs=475.3
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCC
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 225 (1085)
.++++|+||+|.++||.+|||||+|||||||||++||||... ..++|+|++||++.++...+|.+|||.|+|.|.+++|
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~-G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTG-GYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCccc-ceEEeEEEECCeeCchhhhccccceeecccccCcccc
Confidence 567899999999999999999999999999999999999754 3689999999999987778899999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|||.|.|+|.++.+.+. ++ .+....||+|++.|+|++++|.+||+.+ +
T Consensus 881 VrESL~fSA~LRlp~~v-----------------~~--------------~ek~~yVe~Vi~lleL~~~~daiVG~~G-~ 928 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKEV-----------------SD--------------EEKYEYVEEVIELLELKEYADALVGLPG-S 928 (1391)
T ss_pred hHHHHHHHHHHcCCCcC-----------------CH--------------HHHHHHHHHHHHHhCchhhhhhhccCCC-C
Confidence 99999999988754321 11 1123469999999999999999999877 9
Q ss_pred cCchhhhhHHHHHHHHhCCC-cEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec-C
Q 001400 306 GISGGQKKRLTTGELLVGPA-RVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS-E 383 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p-~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~-~ 383 (1085)
|||..||||++||-.|+.+| .||||||||||||+.++..|++.+|++++ .|+|++|+||||+.++++.||++++|. .
T Consensus 929 GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkrG 1007 (1391)
T KOG0065|consen 929 GLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKRG 1007 (1391)
T ss_pred CCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhcC
Confidence 99999999999999999999 99999999999999999999999999998 589999999999999999999999995 6
Q ss_pred CeEEEecChh----hHHHHHHhCC-CCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchh
Q 001400 384 GQIVYQGPRV----SVLDFFASMG-FSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLS 458 (1085)
Q Consensus 384 G~iv~~G~~~----~~~~~f~~~G-~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (1085)
|++||.||.. .+++||++.| .+||+..|||||..|+.+...+.. ...++++.|+.+..+++..
T Consensus 1008 GqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 1008 GQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred CeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHHH
Confidence 8999999974 4667999997 899999999999999987644321 1237899999999888877
Q ss_pred hhhc---CcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccc
Q 001400 459 EELA---VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTID 535 (1085)
Q Consensus 459 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~ 535 (1085)
+++. .+... .........+|..+.|.|++.|++|+++.+||++.+...|++..++.++++|..||+.+ .+.+
T Consensus 1076 e~v~~l~~~~~~--~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g---~~~q 1150 (1391)
T KOG0065|consen 1076 ELVKELSQPPPG--FSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVG---HNVQ 1150 (1391)
T ss_pred HHHHHHhcCCcc--CCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecC---CcHH
Confidence 6644 33322 12223334568999999999999999999999999999999999999999999999998 3455
Q ss_pred cchhHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccc
Q 001400 536 DGGLYLGALYFSMVIILFNGFT-EVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDP 614 (1085)
Q Consensus 536 ~~~~~~g~lf~~l~~~~~~~~~-~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~ 614 (1085)
+.++.++++|.++++...+... .......++-++||||..++|+.++|+++..++++|+.++.+.+|.+++||++||..
T Consensus 1151 ~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~ 1230 (1391)
T KOG0065|consen 1151 GLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYW 1230 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchh
Confidence 6677789988887776554443 455566788999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHH
Q 001400 615 NVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAA 694 (1085)
Q Consensus 615 ~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~ 694 (1085)
++.+|+.+++..++.......++.++.+++|+..+|..+.+++..++.+|+||++++..||.||+|+||+||+.|..+++
T Consensus 1231 ~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gl 1310 (1391)
T KOG0065|consen 1231 TASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGL 1310 (1391)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCcccccCCC-------CCcchHHHHHhhcC----CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001400 695 SVNEFLGHSWDKKAGN-------SNFSLGEAILRQRS----LFPESYWYWIGVGAMLGYTLLFNALFTFFLSYL 757 (1085)
Q Consensus 695 ~~nef~~~~~~~~~~~-------~~~~~g~~~l~~~~----~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~ 757 (1085)
....+.+..-.|.... ...+.|+.+...++ +..+... ...++.+.|.+.+..++.+..+|.
T Consensus 1311 i~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a--~~~c~~c~y~v~~~~l~~f~~~y~ 1382 (1391)
T KOG0065|consen 1311 ISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLA--TTACVYCAYTVADAFLAAFNIKYL 1382 (1391)
T ss_pred HHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcc--eeEEEEeeeehHHHHHHHHHHHHH
Confidence 9998887655553322 34566776665555 3222111 111223445666666666666654
No 10
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-73 Score=711.77 Aligned_cols=757 Identities=21% Similarity=0.265 Sum_probs=403.7
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCH
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 226 (1085)
..+.|+|||+.|++|++++|+||.|||||+||.+|.|.++. .+|+|.++| .++||||++|++ +.||
T Consensus 533 ~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~---~sG~v~v~g----------siaYv~Q~pWI~-ngTv 598 (1381)
T KOG0054|consen 533 PEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPK---LSGSVAVNG----------SVAYVPQQPWIQ-NGTV 598 (1381)
T ss_pred CcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccc---ccceEEEcC----------eEEEeccccHhh-CCcH
Confidence 34489999999999999999999999999999999999875 499999999 599999999955 5699
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
||||.|+.... ..||+.+.++|.+++|..+.|.+| .|.||++++ +
T Consensus 599 reNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGi-n 643 (1381)
T KOG0054|consen 599 RENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGI-N 643 (1381)
T ss_pred HHhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCcc-C
Confidence 99999987654 578999999999998888777776 499998766 7
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||++|||++++++|++||+|.|++|+++..+|++.+-. ..++++|+|.++| .-+..+.+|.|++|++|+|
T Consensus 644 LSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~--~~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I 720 (1381)
T KOG0054|consen 644 LSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIR--GLLRGKTVILVTH-QLQFLPHADQIIVLKDGKI 720 (1381)
T ss_pred CcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHH--hhhcCCEEEEEeC-chhhhhhCCEEEEecCCeE
Confidence 999999999999999999999999999999999999999986552 2344455555666 5677889999999999999
Q ss_pred EEecChhhHHH---HHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcC
Q 001400 387 VYQGPRVSVLD---FFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1085)
Q Consensus 387 v~~G~~~~~~~---~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1085)
+..|+.+++.+ +|+++ +.+....++.. .....+....+..+. +. +.........+. ..
T Consensus 721 ~~~Gty~el~~~~~~~~~l-------------~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~ 781 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAEL-------------AHEEESEQEEE---ASEKDLESGESSRES-ES-RSLESLSSEEEK-SK 781 (1381)
T ss_pred ecccCHHHHHhcchhHHHH-------------hhccchhhccc---cccccccccccccch-hh-hhhhhhcccccc-cc
Confidence 99999999973 23222 00000000000 000000000000000 00 000000000000 00
Q ss_pred cccccCCCcccccC---CCCCCcHHHHHHHHHHHHHHHHhhChHHHH-HHHHHHHHHHHHHHHHhcCCCC-CCC--cc--
Q 001400 464 PFDRRFNHPAALST---SKYGEKRSELLKTSFNWQLLLMKRNSFIYV-FKFIQLLIVALITMTVFFRTTM-HHK--TI-- 534 (1085)
Q Consensus 464 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~-~~~~~~~~~ali~g~vf~~~~~-~~~--~~-- 534 (1085)
..+ ..+..... ...+.-.| ...+.+........... ..+.+.....+.+++-||-..+ +.. ..
T Consensus 782 -~~~--~~~~~~~~~ee~~~G~v~~-----~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~ 853 (1381)
T KOG0054|consen 782 -DEK--EEEDKLVQEEERETGKVSW-----SVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT 853 (1381)
T ss_pred -ccc--chhhHHHHHHHHhcCEeeH-----HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 000 00000000 00011011 11122222211111111 1122222223333333332111 111 01
Q ss_pred -ccchhHHHHHHHHHHHH-HHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 001400 535 -DDGGLYLGALYFSMVII-LFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGY 612 (1085)
Q Consensus 535 -~~~~~~~g~lf~~l~~~-~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~ 612 (1085)
.+...|.+.+.+..+.. ++..+..+..+...... .+..| -.+-..+..-|+.++.+.--
T Consensus 854 ~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~a---S~~Lh------~~ml~~Ilrapm~FFdtTP~---------- 914 (1381)
T KOG0054|consen 854 TVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKA---SRKLH------DKLLNSILRAPMSFFDTTPT---------- 914 (1381)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH------HHHHHHHHhCcchhcCCCCc----------
Confidence 12222322221111111 11111111111100000 00000 00111222223333222111
Q ss_pred cccHHHHHHHHHH-----HHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHH
Q 001400 613 DPNVVRFSRQLLL-----YFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPL 687 (1085)
Q Consensus 613 ~~~~~~f~~~~l~-----~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~ 687 (1085)
-+-..||....-. -+.+..+...+..+++.+.-...+ +....+..+++ .++||.--.
T Consensus 915 GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~-~P~fli~~~pl-----------------~v~~~~~~~ 976 (1381)
T KOG0054|consen 915 GRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYV-TPWFLIAIIPL-----------------GVIYYFVQR 976 (1381)
T ss_pred cchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHH-hHHHHHHHHHH-----------------HHHHHHHHH
Confidence 0112333333211 111111111111111111000000 00000000000 111111112
Q ss_pred HHHHHHHHHhhhcC---------------CcccccCCCCCcchHHHHHhhcCCCCCCcc------hHHHHHH-HHHHHHH
Q 001400 688 MYAQNAASVNEFLG---------------HSWDKKAGNSNFSLGEAILRQRSLFPESYW------YWIGVGA-MLGYTLL 745 (1085)
Q Consensus 688 ~y~~~a~~~nef~~---------------~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~------~w~~~g~-ll~~~~~ 745 (1085)
+|...+--+....+ .......-+.....-.......+.+...++ .|.++-. +++..++
T Consensus 977 ~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v 1056 (1381)
T KOG0054|consen 977 YYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVV 1056 (1381)
T ss_pred HHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222111111111 111111111111111111111222222222 2443322 1111111
Q ss_pred HHHHHHHHHHhcCCCCCcccccc--hh-h----h----hhHhhhhcCcchhHHHHhhhh--------cccccCCcccccC
Q 001400 746 FNALFTFFLSYLNPLGKQQAVVS--KK-E----L----QERDRRRKGENVVIELREYLQ--------RSSSLNGKYFKQK 806 (1085)
Q Consensus 746 f~~l~~~~l~~~~~~~~~~~~~~--~~-~----~----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 806 (1085)
+.+.+...+..-.....+....+ .. . . ......+..-.+..+..++.. .....+++.||.+
T Consensus 1057 ~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~ 1136 (1381)
T KOG0054|consen 1057 LIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSK 1136 (1381)
T ss_pred HHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCC
Confidence 11111111111110101110000 00 0 0 000000000001111111111 1111145567777
Q ss_pred CcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeee
Q 001400 807 GMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEG 886 (1085)
Q Consensus 807 ~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G 886 (1085)
|.+ .|+++++. |.. +-..+|+||||+|+|||++||||++|||||||+++|.+... +.+|
T Consensus 1137 G~I-~f~~~~~R-----Yrp-------------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G 1195 (1381)
T KOG0054|consen 1137 GEI-EFEDLSLR-----YRP-------------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEG 1195 (1381)
T ss_pred CeE-EEEEeEEE-----eCC-------------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCC
Confidence 732 33333332 332 23469999999999999999999999999999999999876 4689
Q ss_pred EEEEcCccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccc-----
Q 001400 887 DIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSG----- 958 (1085)
Q Consensus 887 ~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~----- 958 (1085)
+|.|||.++.+ .+.|++++.+||+|.+|.+ |+|.|| ++..+..++.+++++|.++|.+.-.
T Consensus 1196 ~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG-TvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~ 1264 (1381)
T KOG0054|consen 1196 EILIDGVDISKIGLHDLRSRLSIIPQDPVLFSG-TVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGG 1264 (1381)
T ss_pred eEEEcCeecccccHHHHHhcCeeeCCCCceecC-cccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcC
Confidence 99999999764 5678999999999999876 888887 3334455677899999998865432
Q ss_pred --cccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhc
Q 001400 959 --ALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESF 1036 (1085)
Q Consensus 959 --~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~ 1036 (1085)
..+. +++.++|.||||.+|+||||+++++||+|||+|+++|+++...|+++||+-. +++|||+|+|+++ ....+
T Consensus 1265 Ld~~v~-egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F-~dcTVltIAHRl~--TVmd~ 1340 (1381)
T KOG0054|consen 1265 LDSEVS-EGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF-KDCTVLTIAHRLN--TVMDS 1340 (1381)
T ss_pred CCceec-CCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh-cCCeEEEEeeccc--hhhhc
Confidence 2222 3457899999999999999999999999999999999999999999999954 6899999999976 55678
Q ss_pred CEEEEEecCcEEEEecCCCC
Q 001400 1037 DELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 1037 d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|||+||++ |+++++|.+.+
T Consensus 1341 DrVlVld~-G~v~EfdsP~~ 1359 (1381)
T KOG0054|consen 1341 DRVLVLDA-GRVVEFDSPAE 1359 (1381)
T ss_pred CeEEEeeC-CeEeecCChHH
Confidence 99999986 68888887643
No 11
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3e-73 Score=745.03 Aligned_cols=559 Identities=24% Similarity=0.358 Sum_probs=460.8
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCH
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 226 (1085)
++.+|+|||+.++||++++|+|||||||||||++|+|+.++....+|+|.+||+++.. ..++.++||+|+|.+++.+||
T Consensus 775 ~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv 853 (1394)
T TIGR00956 775 KRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTV 853 (1394)
T ss_pred CcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCH
Confidence 3579999999999999999999999999999999999986433458999999998753 346789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+|||.|+++++.+... . .. +...+++++++.+||.+++|+.||+.. .+
T Consensus 854 ~E~L~~~a~l~~~~~~-~------~~------------------------~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~ 901 (1394)
T TIGR00956 854 RESLRFSAYLRQPKSV-S------KS------------------------EKMEYVEEVIKLLEMESYADAVVGVPG-EG 901 (1394)
T ss_pred HHHHHHHHHhCCCCCC-C------HH------------------------HHHHHHHHHHHHcCChhhCCCeeCCCC-CC
Confidence 9999998876532110 0 00 112358899999999999999998643 48
Q ss_pred CchhhhhHHHHHHHHhCCCc-EeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC-
Q 001400 307 ISGGQKKRLTTGELLVGPAR-VLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG- 384 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~-vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G- 384 (1085)
|||||||||+||++|+.+|+ ||||||||||||+.++..|++.|+++++ .+.|+|+++||+...+++.||++++|++|
T Consensus 902 LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~-~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 902 LNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLAD-HGQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 99999999999999999997 9999999999999999999999999976 36788888988888888999999999987
Q ss_pred eEEEecCh----hhHHHHHHhCCC-CCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhh
Q 001400 385 QIVYQGPR----VSVLDFFASMGF-SCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSE 459 (1085)
Q Consensus 385 ~iv~~G~~----~~~~~~f~~~G~-~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (1085)
+++|+|+. +++.+||+++|+ +||++.|||||+.++.+...... ...++.+.|+.+...+...+
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~ 1048 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKN 1048 (1394)
T ss_pred EEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHH
Confidence 99999997 678999999996 99999999999999876432110 01245566665554443332
Q ss_pred hhcC---cccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccc
Q 001400 460 ELAV---PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDD 536 (1085)
Q Consensus 460 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~ 536 (1085)
++.. +.............++|..+++.|+..+++|.++..+|++.+...|+++.+++|+++|++|++.+.+ ..+
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~ 1125 (1394)
T TIGR00956 1049 ELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQG 1125 (1394)
T ss_pred HHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHH
Confidence 2211 1111100001112246889999999999999999999999999999999999999999999998753 234
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccc
Q 001400 537 GGLYLGALYFSMVIILFNGFTEVSMLVAKLPVL-YKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPN 615 (1085)
Q Consensus 537 ~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~-~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~ 615 (1085)
.+...|++|+.+++..+.....++.++.+++++ +|||..++|+.++|++++++.++|+.++.+++|.+++|||+|+.++
T Consensus 1126 i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~ 1205 (1394)
T TIGR00956 1126 LQNQMFAVFMATVLFNPLIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWN 1205 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCc
Confidence 456688888877766555445566677777774 9999999999999999999999999999999999999999999887
Q ss_pred HHH-------HHHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHH
Q 001400 616 VVR-------FSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLM 688 (1085)
Q Consensus 616 ~~~-------f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ 688 (1085)
+.. |+.+++++++...++.+++.++++++++..+|..+++++..++++|+||++++++||.||+|++|+||+.
T Consensus 1206 ~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~ 1285 (1394)
T TIGR00956 1206 ASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFT 1285 (1394)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHH
Confidence 755 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCcccccCC-------------------------------C-------CCcchHHHHHhhcCCCCCCc
Q 001400 689 YAQNAASVNEFLGHSWDKKAG-------------------------------N-------SNFSLGEAILRQRSLFPESY 730 (1085)
Q Consensus 689 y~~~a~~~nef~~~~~~~~~~-------------------------------~-------~~~~~g~~~l~~~~~~~~~~ 730 (1085)
|++++++.|+|.+....|... + +....|+++|+.+++....
T Consensus 1286 y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~- 1364 (1394)
T TIGR00956 1286 YLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSG- 1364 (1394)
T ss_pred HHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccc-
Confidence 999999999998876544221 0 1145788999988876554
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001400 731 WYWIGVGAMLGYTLLFNALFTFFLSYL 757 (1085)
Q Consensus 731 ~~w~~~g~ll~~~~~f~~l~~~~l~~~ 757 (1085)
.|.+++++++|++++ ++.++++.|.
T Consensus 1365 -~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1365 -RWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred -cccchhhhhHHHHHH-HHHHHhhheE
Confidence 589999999999888 6666666664
No 12
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.1e-71 Score=719.83 Aligned_cols=201 Identities=28% Similarity=0.430 Sum_probs=176.4
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 919 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~~tv 919 (1085)
+.+|+||||.|++||++||+|+||||||||+++|+|... +.+|+|.++|+++.. ...++.+|||+|++.+++.+|+
T Consensus 1952 ~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~~LTv 2029 (2272)
T TIGR01257 1952 SPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTG 2029 (2272)
T ss_pred ceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEECcchHHHHhhhEEEEeccccCCCCCCH
Confidence 579999999999999999999999999999999999876 568999999988642 2345679999999999999999
Q ss_pred HHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Q 001400 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1085)
Q Consensus 920 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgL 999 (1085)
+|++.+.+.++. ...++.++.++++++.++|.+..+..+ +.|||||||||+||+||+.+|+||||||||+||
T Consensus 2030 ~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGqKqRLslA~ALi~~P~VLLLDEPTsGL 2101 (2272)
T TIGR01257 2030 REHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGM 2101 (2272)
T ss_pred HHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCC
Confidence 999998766543 223334556788999999988877664 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 1000 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|+.+++.+++.|++++++|+|||+|||+++ ++...|||+++|++ |+++..|+.
T Consensus 2102 Dp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs~ 2154 (2272)
T TIGR01257 2102 DPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGTI 2154 (2272)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999878999999999986 57788999999985 789988875
No 13
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.6e-68 Score=705.02 Aligned_cols=211 Identities=22% Similarity=0.301 Sum_probs=174.0
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 895 (1085)
.+.|+|+++.++. +..++|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEec
Confidence 4677777766521 12469999999999999999999999999999999999876 5689999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------ccccCCCC
Q 001400 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1085)
Q Consensus 896 ~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~ 965 (1085)
+. ..+|+.++||||++.++.+ |++|||.++. + ..++.++++++..++.+.. |..++. +
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~----~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge-~ 1371 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------E----HNDADLWESLERAHLKDVIRRNSLGLDAEVSE-A 1371 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------C----CCHHHHHHHHHHcCcHHHHHhCccccCccccC-C
Confidence 54 5678899999999999976 9999996531 1 1234577888887775432 333333 2
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 966 ~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
+.+||||||||+||||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|++|++
T Consensus 1372 G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~- 1447 (1622)
T PLN03130 1372 GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA- 1447 (1622)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999974 5899999999975 5677999999985
Q ss_pred cEEEEecCCC
Q 001400 1046 GELIYAGPLG 1055 (1085)
Q Consensus 1046 G~~~~~g~~~ 1055 (1085)
|++++.|+..
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 7999988753
No 14
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.8e-68 Score=613.08 Aligned_cols=475 Identities=26% Similarity=0.335 Sum_probs=358.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC-CceeeEEEECCccCCCCC-------CCceEEEEccCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDW 219 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~d~ 219 (1085)
..+++||||++.|||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++.... ..+.++|++|++.
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999999876 456899999998764432 2368999999974
Q ss_pred --CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccc
Q 001400 220 --QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1085)
Q Consensus 220 --~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1085)
+-|-+||.+.|.-..+.++...+ .+...++.++|+.+||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~~---------------------------------~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGSR---------------------------------AEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhccccH---------------------------------HHHHHHHHHHHHHcCCCChhhh
Confidence 56778999888765554432210 1123457889999999987654
Q ss_pred cccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCe
Q 001400 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1085)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1085)
+++.+.|||||||||.||+||+.+|++|++||||++||+.++.+|.+.|+++.++. ++.++.++|+..-+.+++|+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~-g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQREL-GMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHc-CcEEEEEcCCHHHHHHhcCe
Confidence 56788999999999999999999999999999999999999999999999998764 67777799999999999999
Q ss_pred EEEecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccch
Q 001400 378 VILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNL 457 (1085)
Q Consensus 378 ii~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (1085)
|+||++|++|+.|+.+++..- +..||+. . +
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~---------------------------------p~hpYT~---~--------------L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN---------------------------------PQHPYTR---G--------------L 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc---------------------------------cCCcccH---H--------------H
Confidence 999999999999999888531 1112210 0 0
Q ss_pred hhhhcCcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccc
Q 001400 458 SEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDG 537 (1085)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~ 537 (1085)
.+
T Consensus 255 l~------------------------------------------------------------------------------ 256 (539)
T COG1123 255 LA------------------------------------------------------------------------------ 256 (539)
T ss_pred Hh------------------------------------------------------------------------------
Confidence 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHH
Q 001400 538 GLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVV 617 (1085)
Q Consensus 538 ~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~ 617 (1085)
..|.....+.
T Consensus 257 ---------------------------a~p~~~~~~~------------------------------------------- 266 (539)
T COG1123 257 ---------------------------AVPRLGDEKI------------------------------------------- 266 (539)
T ss_pred ---------------------------hCCCcccccc-------------------------------------------
Confidence 0000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHh
Q 001400 618 RFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVN 697 (1085)
Q Consensus 618 ~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~n 697 (1085)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCcccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhh
Q 001400 698 EFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDR 777 (1085)
Q Consensus 698 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 777 (1085)
.+...
T Consensus 267 -----~~~~~---------------------------------------------------------------------- 271 (539)
T COG1123 267 -----IRLPR---------------------------------------------------------------------- 271 (539)
T ss_pred -----ccccc----------------------------------------------------------------------
Confidence 00000
Q ss_pred hhcCcchhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeE
Q 001400 778 RRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVL 857 (1085)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~ 857 (1085)
.... .....+..++++..| .....+. ....+...+++||||++++||+
T Consensus 272 -------------------~~~~----~~~~ll~V~~l~k~y-------~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~ 319 (539)
T COG1123 272 -------------------RGPL----RAEPLLSVRNLSKRY-------GSRKGLF--VRERGEVKAVDDVSFDLREGET 319 (539)
T ss_pred -------------------cccc----ccCceeEeeeeeeee-------ccccccc--cccccceeeeeeeeeEecCCCE
Confidence 0000 000011111122211 1110000 0002346799999999999999
Q ss_pred EEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC--C---hhcccceEEEEccCCC--CCCCCCHHHHHHHhhhhc
Q 001400 858 TALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK--R---QETFARISGYCEQNDI--HSPGLTVLESLLFSAWLR 930 (1085)
Q Consensus 858 ~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gy~~Q~~~--~~~~~tv~e~l~~~~~~~ 930 (1085)
+||+|+||||||||.++|+|+.+ +.+|.|.++|.+. + ....++.+-+++|+|. +.|.+||.+.+.-.....
T Consensus 320 lglVGeSGsGKSTlar~i~gL~~--P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~ 397 (539)
T COG1123 320 LGLVGESGSGKSTLARILAGLLP--PSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIH 397 (539)
T ss_pred EEEECCCCCCHHHHHHHHhCCCC--CCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhh
Confidence 99999999999999999999887 4689999999762 1 1234567788888864 579999999987654333
Q ss_pred CCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH
Q 001400 931 LPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMR 1009 (1085)
Q Consensus 931 ~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~ 1009 (1085)
.. ....+.++.+.++++.++|.. +.+.+ +.+||||||||++|||||+.+|++|++|||||.||+..++.|.+
T Consensus 398 ~~--~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~Vln 470 (539)
T COG1123 398 GG--GSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLN 470 (539)
T ss_pred cc--cchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHH
Confidence 22 224556677999999999985 33333 35899999999999999999999999999999999999999999
Q ss_pred HHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 1010 TVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 1010 ~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|+++.++ |.|.|+||||+.. +...|||+++|++ |+++..||..
T Consensus 471 Ll~~lq~e~g~t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~~ 515 (539)
T COG1123 471 LLKDLQEELGLTYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPTE 515 (539)
T ss_pred HHHHHHHHhCCEEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCHH
Confidence 99999765 9999999999874 7788999999985 7999999754
No 15
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-67 Score=699.76 Aligned_cols=211 Identities=21% Similarity=0.297 Sum_probs=174.0
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 895 (1085)
.+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 4677777766521 22469999999999999999999999999999999999876 5689999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------ccccCCCC
Q 001400 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1085)
Q Consensus 896 ~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~ 965 (1085)
++ ..++++++||||++.++++ |++|||.++. +. .++.++++++..++.+.. |..++. +
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~----sdeei~~al~~a~l~~~I~~lp~GLdt~v~e-~ 1368 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EH----NDADLWEALERAHIKDVIDRNPFGLDAEVSE-G 1368 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CC----CHHHHHHHHHHcCCHHHHHhCcCCCCceecC-C
Confidence 53 5678899999999999976 9999996431 11 234577888888775432 233333 2
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 966 ~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
+.+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|++|++
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~- 1444 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS- 1444 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999864 5899999999975 5667999999985
Q ss_pred cEEEEecCCC
Q 001400 1046 GELIYAGPLG 1055 (1085)
Q Consensus 1046 G~~~~~g~~~ 1055 (1085)
|++++.|+..
T Consensus 1445 G~ivE~Gt~~ 1454 (1495)
T PLN03232 1445 GQVLEYDSPQ 1454 (1495)
T ss_pred CEEEEECCHH
Confidence 7999988753
No 16
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=6.2e-65 Score=666.72 Aligned_cols=216 Identities=20% Similarity=0.325 Sum_probs=174.4
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC-------------
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------------- 882 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~------------- 882 (1085)
.+.|+|++|.++.. ++.++|+|+||+|+||+++||+|+||||||||+++|.|...+.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 47788888776321 2346999999999999999999999999999999999976531
Q ss_pred ---------------------------------------eeeeEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHH
Q 001400 883 ---------------------------------------IIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVL 920 (1085)
Q Consensus 883 ---------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~tv~ 920 (1085)
+.+|+|.+||.++++ ..+++.+|||+|++.+|. .|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHH
Confidence 148999999998753 567889999999999985 6999
Q ss_pred HHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------cccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 921 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
||+.|+. + +.. ++.++++++..++.+. .|..+|.. +..||||||||++|||||+++|+|||||
T Consensus 1314 eNI~~g~----~-~at----~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK----E-DAT----REDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999862 1 111 2346677777666443 34455533 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-HCCceEEEEecCccHHHHHhcCEEEEEecC---cE-EEEecCC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRG---GE-LIYAGPL 1054 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~il~l~~g---G~-~~~~g~~ 1054 (1085)
||||+||+++.+.|++.|+++. .+++|+|+|+|+++ ..+.||+|++|++| |+ ++..|+-
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999985 36899999999975 56789999999973 66 5577763
No 17
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.4e-66 Score=686.53 Aligned_cols=211 Identities=21% Similarity=0.253 Sum_probs=174.0
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 895 (1085)
.+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1284 ~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEEc
Confidence 4677777776631 12369999999999999999999999999999999999876 5689999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------ccccCCCC
Q 001400 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1085)
Q Consensus 896 ~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~ 965 (1085)
+. ..+|+.++||||++.++.+ |++|||.... + ..++.++++++.+++.+.- |..++. +
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~----~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e-~ 1418 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------Q----YSDEEVWWALELAHLKTFVSALPDKLDHECAE-G 1418 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------C----CCHHHHHHHHHHcCcHHHHhhCccCCCceecC-C
Confidence 54 5678899999999999976 9999995211 1 1234477888888875432 333433 2
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 966 ~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
+.+||||||||+||||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....+|+|++|++
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~- 1494 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK- 1494 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999864 5899999999975 5678999999985
Q ss_pred cEEEEecCCC
Q 001400 1046 GELIYAGPLG 1055 (1085)
Q Consensus 1046 G~~~~~g~~~ 1055 (1085)
|++++.|+..
T Consensus 1495 G~IvE~G~~~ 1504 (1522)
T TIGR00957 1495 GEVAEFGAPS 1504 (1522)
T ss_pred CEEEEECCHH
Confidence 7999998753
No 18
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-66 Score=623.96 Aligned_cols=469 Identities=21% Similarity=0.318 Sum_probs=347.1
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.+++. +.+|+|.++|.++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 36999999999999999999999999999999999998751 249999999998754321 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.|+......+. .+ . .....+++++++.+||++..+..+
T Consensus 97 ~tv~e~l~~~~~~~~~~~-~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-MD------Y------------------------DAMYLRAQKLLAQLKLDINPATPV---- 141 (506)
T ss_pred CcHHHHhhhcccccccCC-cC------H------------------------HHHHHHHHHHHHHcCCCCCcccch----
Confidence 999999988643210000 00 0 001224778899999987777655
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|+|++|++
T Consensus 142 -~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 142 -GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAH--GIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998653 45566688999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcC
Q 001400 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1085)
Q Consensus 384 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1085)
|++++.|+.+++.. .+.. +.+
T Consensus 219 G~i~~~~~~~~~~~---------------~~~~-----------------------------~~~--------------- 239 (506)
T PRK13549 219 GRHIGTRPAAGMTE---------------DDII-----------------------------TMM--------------- 239 (506)
T ss_pred CEEeeecccccCCH---------------HHHH-----------------------------HHh---------------
Confidence 99998886432200 0000 000
Q ss_pred cccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHHH
Q 001400 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1085)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1085)
.... .
T Consensus 240 -------------------------------------------------------------~~~~-----~--------- 244 (506)
T PRK13549 240 -------------------------------------------------------------VGRE-----L--------- 244 (506)
T ss_pred -------------------------------------------------------------hCcC-----c---------
Confidence 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHHH
Q 001400 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1085)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~ 623 (1085)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCCc
Q 001400 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1085)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~~ 703 (1085)
+
T Consensus 245 ---------------------------------------------------~---------------------------- 245 (506)
T PRK13549 245 ---------------------------------------------------T---------------------------- 245 (506)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred ccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcc
Q 001400 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1085)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1085)
. ..
T Consensus 246 ------~--------------~~--------------------------------------------------------- 248 (506)
T PRK13549 246 ------A--------------LY--------------------------------------------------------- 248 (506)
T ss_pred ------c--------------cc---------------------------------------------------------
Confidence 0 00
Q ss_pred hhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEcc
Q 001400 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1085)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~ 863 (1085)
+.. . .. . . ...+.++++++.++. .++..+|+||||+|++||++||+|+
T Consensus 249 --------~~~--~-~~---~-~-------~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~G~ 296 (506)
T PRK13549 249 --------PRE--P-HT---I-G-------EVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIAGL 296 (506)
T ss_pred --------ccc--c-cC---C-C-------CceEEEecCcccccc----------ccccccccceeeEEcCCcEEEEeCC
Confidence 000 0 00 0 0 001222333221100 0234589999999999999999999
Q ss_pred CCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHhhhhcCCC--c
Q 001400 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRLPS--E 934 (1085)
Q Consensus 864 nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~---~~~~~~tv~e~l~~~~~~~~~~--~ 934 (1085)
||||||||+++|+|...+ +.+|+|.++|.++.. ...++.+||++|++ .+++.+|+.||+.+........ .
T Consensus 297 NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 375 (506)
T PRK13549 297 VGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSR 375 (506)
T ss_pred CCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcc
Confidence 999999999999997641 258999999987532 12345689999985 4678899999998753211100 0
Q ss_pred ccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 001400 935 IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRN 1013 (1085)
Q Consensus 935 ~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~ 1013 (1085)
.......+.++++++.+++. +..+..+ ..|||||||||+|||||+.+|+||||||||+|||+.+++.+++.|++
T Consensus 376 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~ 450 (506)
T PRK13549 376 IDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQ 450 (506)
T ss_pred cChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHH
Confidence 12223345678899999985 3555443 57999999999999999999999999999999999999999999999
Q ss_pred HHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCch-HHHHHHH
Q 001400 1014 IVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKS-CELIKYF 1065 (1085)
Q Consensus 1014 ~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~~-~~~~~~~ 1065 (1085)
++++|+|||++|||++ ++.+.||++++|++ |+++..|+..+.. .++.+.+
T Consensus 451 l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~~~~~~~~~~ 501 (506)
T PRK13549 451 LVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHNLTQEQVMEAA 501 (506)
T ss_pred HHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEeccccCCHHHHHHHH
Confidence 9888999999999986 47788999999985 7888888776542 3344443
No 19
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-65 Score=628.38 Aligned_cols=488 Identities=20% Similarity=0.249 Sum_probs=346.4
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCC----------CCC-------CCce
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFK----------EFV-------PPRT 210 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~----------~~~-------~~~~ 210 (1085)
.++|+|||+.+++|++++|+||||||||||+++|+|.++|. +|+|.++|..+. ... ..+.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999876 899999986431 100 1246
Q ss_pred EEEEccCC--CCCCCCCHHHHHHHhhhhc-CCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHH
Q 001400 211 SAYVSQQD--WQVAEMTVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 287 (1085)
Q Consensus 211 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~ 287 (1085)
++||+|++ .+++.+||+||+.++.+.. +.. + .+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS-R---------------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 99999997 5788899999999875432 110 0 001234778899
Q ss_pred HhCCcc---cccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEE
Q 001400 288 ILGLDT---CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 364 (1085)
Q Consensus 288 ~lgL~~---~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~ 364 (1085)
.+||++ ..+. .+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++.. +++|+.+
T Consensus 152 ~~gL~~~~~~~~~-----~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSR-----YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHhC-----CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999964 2344 445799999999999999999999999999999999999999999999997643 4556678
Q ss_pred ecChhHHHhhcCeEEEecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHH
Q 001400 365 LQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKF 444 (1085)
Q Consensus 365 ~q~~~~~~~~~D~ii~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 444 (1085)
+|+..++.++||+|++|++|++++.|+++++.. -|.+....+++..+
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~~~------------------------- 272 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLAAV------------------------- 272 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhhcc-------------------------
Confidence 999999999999999999999999998765521 00000000000000
Q ss_pred HHHHHhCccccchhhhhcCcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHh
Q 001400 445 AEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVF 524 (1085)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf 524 (1085)
+
T Consensus 273 -------------------~------------------------------------------------------------ 273 (623)
T PRK10261 273 -------------------P------------------------------------------------------------ 273 (623)
T ss_pred -------------------C------------------------------------------------------------
Confidence 0
Q ss_pred cCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhh
Q 001400 525 FRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVA 604 (1085)
Q Consensus 525 ~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~ 604 (1085)
... .. .+ +. .|
T Consensus 274 -~~~----~~-~~-----------------------------------~~-----------------~~----------- 284 (623)
T PRK10261 274 -QLG----AM-KG-----------------------------------LD-----------------YP----------- 284 (623)
T ss_pred -ccc----cc-cc-----------------------------------cc-----------------CC-----------
Confidence 000 00 00 00 00
Q ss_pred hhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhh
Q 001400 605 VTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWV 684 (1085)
Q Consensus 605 i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~i 684 (1085)
. ..+.
T Consensus 285 ------------------------------------------------------------------~-~~~~-------- 289 (623)
T PRK10261 285 ------------------------------------------------------------------R-RFPL-------- 289 (623)
T ss_pred ------------------------------------------------------------------c-cccc--------
Confidence 0 0000
Q ss_pred cHHHHHHHHHHHhhhcCCcccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 001400 685 SPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQ 764 (1085)
Q Consensus 685 sp~~y~~~a~~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~ 764 (1085)
. ....+.
T Consensus 290 ---------------~---~~~~~~------------------------------------------------------- 296 (623)
T PRK10261 290 ---------------I---SLEHPA------------------------------------------------------- 296 (623)
T ss_pred ---------------c---cccccc-------------------------------------------------------
Confidence 0 000000
Q ss_pred cccchhhhhhHhhhhcCcchhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEE
Q 001400 765 AVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQL 844 (1085)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~ 844 (1085)
. . .. . ..... .+.. ...+.++|+++.++..... .....+...+
T Consensus 297 ----~----------~-~~--------~----~~~~~-~~~~-------~~~L~~~~l~~~y~~~~~~--~~~~~~~~~~ 339 (623)
T PRK10261 297 ----K----------Q-EP--------P----IEQDT-VVDG-------EPILQVRNLVTRFPLRSGL--LNRVTREVHA 339 (623)
T ss_pred ----c----------c-Cc--------c----ccccc-ccCC-------CceEEEeeeEEEEcCCCcc--ccccCCceEE
Confidence 0 0 00 0 00000 0000 0113444444433210000 0000012569
Q ss_pred eeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCC--CCCCC
Q 001400 845 LVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHSPG 916 (1085)
Q Consensus 845 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~--~~~~~ 916 (1085)
|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++ .+++.
T Consensus 340 l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~ 417 (623)
T PRK10261 340 VEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPR 417 (623)
T ss_pred EeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCC
Confidence 999999999999999999999999999999999876 468999999986532 12456799999997 47889
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
+||.|++.+....+.. .......+.+.++++.+++. ...+.. +.+|||||||||+|||||+.+|+|||||||
T Consensus 418 ~tv~~~l~~~~~~~~~--~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAraL~~~p~llllDEP 490 (623)
T PRK10261 418 QTVGDSIMEPLRVHGL--LPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARALALNPKVIIADEA 490 (623)
T ss_pred CCHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999875432211 11233446688999999995 444543 358999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+|||+.++..++++|++++++ |.|||++|||++ .+...||++++|++ |++++.|+..
T Consensus 491 ts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 491 VSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 9999999999999999999765 899999999987 47788999999985 7899988754
No 20
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.5e-65 Score=615.60 Aligned_cols=451 Identities=20% Similarity=0.312 Sum_probs=342.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC----CCceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1085)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999876 999999998875322 13569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.|+.........++ . .....+++++++.+||++..|..++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 140 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRID------W------------------------KKMYAEADKLLARLNLRFSSDKLVG--- 140 (501)
T ss_pred CcHHHHhhhccccccccCccC------H------------------------HHHHHHHHHHHHHcCCCCCccCchh---
Confidence 999999988643210000000 0 0012247788999999887776554
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+.+++.++||+|++|++
T Consensus 141 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 141 --ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQ--GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 59999999999999999999999999999999999999999999998653 45566688999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcC
Q 001400 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1085)
Q Consensus 384 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1085)
|+++..|+.+++.. ....+.+
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHHh---------------
Confidence 99998876432100 0000000
Q ss_pred cccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHHH
Q 001400 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1085)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1085)
+... .
T Consensus 238 -------------------------------------------------------------~~~~-----~--------- 242 (501)
T PRK10762 238 -------------------------------------------------------------VGRK-----L--------- 242 (501)
T ss_pred -------------------------------------------------------------cCCC-----c---------
Confidence 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHHH
Q 001400 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1085)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~ 623 (1085)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCCc
Q 001400 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1085)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~~ 703 (1085)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcc
Q 001400 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1085)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1085)
....
T Consensus 243 -~~~~--------------------------------------------------------------------------- 246 (501)
T PRK10762 243 -EDQY--------------------------------------------------------------------------- 246 (501)
T ss_pred -cccc---------------------------------------------------------------------------
Confidence 0000
Q ss_pred hhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEcc
Q 001400 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1085)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~ 863 (1085)
+.. . . + + .+..+.+++++ ..+|+|+||+|++||++||+|+
T Consensus 247 --------~~~--~--~---~------~-~~~~l~~~~l~------------------~~~l~~vsl~i~~Ge~~~liG~ 286 (501)
T PRK10762 247 --------PRL--D--K---A------P-GEVRLKVDNLS------------------GPGVNDVSFTLRKGEILGVSGL 286 (501)
T ss_pred --------ccc--c--c---C------C-CCcEEEEeCcc------------------cCCcccceEEEcCCcEEEEecC
Confidence 000 0 0 0 0 00012233322 1258899999999999999999
Q ss_pred CCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHhhhhcCCC---
Q 001400 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRLPS--- 933 (1085)
Q Consensus 864 nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~---~~~~~~tv~e~l~~~~~~~~~~--- 933 (1085)
||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++ .+++.+|+.||+.+........
T Consensus 287 NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 364 (501)
T PRK10762 287 MGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGG 364 (501)
T ss_pred CCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhccccc
Confidence 99999999999999866 468999999987532 12345799999996 4678899999998753211000
Q ss_pred cccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 001400 934 EIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1085)
Q Consensus 934 ~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~ 1012 (1085)
........+.++++++.+++. +..+... ..|||||||||+|||||+.+|+||||||||+|||+.++..+++.|+
T Consensus 365 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 439 (501)
T PRK10762 365 SLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLIN 439 (501)
T ss_pred ccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHH
Confidence 011223345678899999984 4555443 5799999999999999999999999999999999999999999999
Q ss_pred HHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc
Q 001400 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1085)
Q Consensus 1013 ~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~ 1057 (1085)
++.++|.|||++|||++ .+.+.||++++|++ |+++..|+..+.
T Consensus 440 ~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 482 (501)
T PRK10762 440 QFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQA 482 (501)
T ss_pred HHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEeccccC
Confidence 99878999999999986 47788999999985 789988887654
No 21
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-65 Score=618.35 Aligned_cols=458 Identities=19% Similarity=0.297 Sum_probs=341.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 36999999999999999999999999999999999998876 9999999988754332 2469999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.++..... ..+.. . ..+ . .+...+++++++.+||.+..++.++
T Consensus 95 ~tv~e~l~~~~~~~~--~~~~~-~----------~~~-~-------------~~~~~~~~~~l~~~gl~~~~~~~~~--- 144 (510)
T PRK09700 95 LTVLENLYIGRHLTK--KVCGV-N----------IID-W-------------REMRVRAAMMLLRVGLKVDLDEKVA--- 144 (510)
T ss_pred CcHHHHhhhcccccc--ccccc-c----------ccC-H-------------HHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999987532100 00000 0 000 0 0012347788999999877776654
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
+|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++..+||+|++|++
T Consensus 145 --~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 145 --NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE--GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 69999999999999999999999999999999999999999999998753 45566688999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcC
Q 001400 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1085)
Q Consensus 384 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1085)
|++++.|+++++.. .+.. +..
T Consensus 221 G~i~~~g~~~~~~~---------------~~~~-----------------------------~~~--------------- 241 (510)
T PRK09700 221 GSSVCSGMVSDVSN---------------DDIV-----------------------------RLM--------------- 241 (510)
T ss_pred CEEeeecchhhCCH---------------HHHH-----------------------------HHh---------------
Confidence 99999887543210 0000 000
Q ss_pred cccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHHH
Q 001400 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1085)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1085)
.... . .
T Consensus 242 -------------------------------------------------------------~~~~-----~-~------- 247 (510)
T PRK09700 242 -------------------------------------------------------------VGRE-----L-Q------- 247 (510)
T ss_pred -------------------------------------------------------------cCCC-----c-c-------
Confidence 0000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHHH
Q 001400 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1085)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~ 623 (1085)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCCc
Q 001400 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1085)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~~ 703 (1085)
+ .+
T Consensus 248 ----------------------------------------------~---------------------------~~---- 250 (510)
T PRK09700 248 ----------------------------------------------N---------------------------RF---- 250 (510)
T ss_pred ----------------------------------------------c---------------------------cc----
Confidence 0 00
Q ss_pred ccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcc
Q 001400 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1085)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1085)
. . ..
T Consensus 251 -~----~--------------~~--------------------------------------------------------- 254 (510)
T PRK09700 251 -N----A--------------MK--------------------------------------------------------- 254 (510)
T ss_pred -c----c--------------cc---------------------------------------------------------
Confidence 0 0 00
Q ss_pred hhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEcc
Q 001400 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1085)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~ 863 (1085)
+ ..... .. +..+.++|++.. ++ .+|+|+||+|++||++||+||
T Consensus 255 --------~----~~~~~---~~-------~~~l~~~~l~~~-------------~~--~~l~~isl~i~~Ge~~~l~G~ 297 (510)
T PRK09700 255 --------E----NVSNL---AH-------ETVFEVRNVTSR-------------DR--KKVRDISFSVCRGEILGFAGL 297 (510)
T ss_pred --------c----ccccC---CC-------CcEEEEeCcccc-------------CC--CcccceeEEEcCCcEEEEECC
Confidence 0 00000 00 001333333221 11 379999999999999999999
Q ss_pred CCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccC---CCCCCCCCHHHHHHHhhhhc---CCC
Q 001400 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQN---DIHSPGLTVLESLLFSAWLR---LPS 933 (1085)
Q Consensus 864 nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~---~~~~~~~tv~e~l~~~~~~~---~~~ 933 (1085)
||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|+ ..+++.+||+||+.+....+ ...
T Consensus 298 NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 375 (510)
T PRK09700 298 VGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKG 375 (510)
T ss_pred CCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccc
Confidence 99999999999999865 468999999986532 1234579999998 35778899999998753211 000
Q ss_pred --c-ccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH
Q 001400 934 --E-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMR 1009 (1085)
Q Consensus 934 --~-~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~ 1009 (1085)
. ......++.++++++.+++. +..+..+ ..|||||||||+|||||+.+|+||||||||+|||+.++..+++
T Consensus 376 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~ 450 (510)
T PRK09700 376 AMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYK 450 (510)
T ss_pred cccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHH
Confidence 0 01222334578899999986 5555543 5799999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 1010 TVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 1010 ~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
.|++++++|.|||++|||++ .+.+.||++++|++ |+++..++.
T Consensus 451 ~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 451 VMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999878999999999986 47788999999985 688887765
No 22
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=8.2e-65 Score=615.06 Aligned_cols=463 Identities=22% Similarity=0.307 Sum_probs=340.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCCCC-------CceEEEEccCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQD 218 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d 218 (1085)
+.+|+|+|+.|++||+++|+|||||||||||++|+|.++|. .+.+|+|.++|.++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999998752 1248999999998754321 24799999996
Q ss_pred C--CCCCCCHHHHHHHhhhhc-CCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcc--
Q 001400 219 W--QVAEMTVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-- 293 (1085)
Q Consensus 219 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 293 (1085)
. +++.+||+|++.+..... +.. . .....+++++++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------R------------------------EAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHCCCCChH
Confidence 4 567789999987643211 100 0 001234788899999975
Q ss_pred -cccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHH
Q 001400 294 -CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 372 (1085)
Q Consensus 294 -~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 372 (1085)
..+..+ ..|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++++.. +.+||.++|+...+.
T Consensus 148 ~~~~~~~-----~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDYP-----HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQEL-NMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhCC-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhc-CCeEEEEcCcHHHHH
Confidence 235444 5699999999999999999999999999999999999999999999987643 445666889999999
Q ss_pred hhcCeEEEecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCc
Q 001400 373 ELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYH 452 (1085)
Q Consensus 373 ~~~D~ii~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (1085)
.+||+|++|++|++++.|+++++... |.. ...
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~---------------------------------~~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH---------------------------------PYT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC---------------------------------HHH-------
Confidence 99999999999999999876554210 000 000
Q ss_pred cccchhhhhcCcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 001400 453 TGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHK 532 (1085)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~ 532 (1085)
+.+ +...
T Consensus 254 -----------------------------------------~~~----------------------------~~~~---- 260 (529)
T PRK15134 254 -----------------------------------------QKL----------------------------LNSE---- 260 (529)
T ss_pred -----------------------------------------HHH----------------------------HHhC----
Confidence 000 0000
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 001400 533 TIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGY 612 (1085)
Q Consensus 533 ~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~ 612 (1085)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHH
Q 001400 613 DPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQN 692 (1085)
Q Consensus 613 ~~~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~ 692 (1085)
+
T Consensus 261 --------------------------------------------------------------~----------------- 261 (529)
T PRK15134 261 --------------------------------------------------------------P----------------- 261 (529)
T ss_pred --------------------------------------------------------------c-----------------
Confidence 0
Q ss_pred HHHHhhhcCCcccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhh
Q 001400 693 AASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKEL 772 (1085)
Q Consensus 693 a~~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~ 772 (1085)
. . .. .
T Consensus 262 -----------------~-----~---------~~--------------------------------~------------ 266 (529)
T PRK15134 262 -----------------S-----G---------DP--------------------------------V------------ 266 (529)
T ss_pred -----------------c-----c---------cc--------------------------------c------------
Confidence 0 0 00 0
Q ss_pred hhHhhhhcCcchhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeecccc-ccccccccCCeEEeeeeeEE
Q 001400 773 QERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVE-LKQEGVLEDRLQLLVNVTGA 851 (1085)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~-~~~~~~~~~~~~~L~~vs~~ 851 (1085)
. . . . .... .+.++++++.++...+ .+ ...+++.+|+||||+
T Consensus 267 -------~-----------~----~--~----~~~~-------~l~~~~l~~~~~~~~~~~~---~~~~~~~il~~isl~ 308 (529)
T PRK15134 267 -------P-----------L----P--E----PASP-------LLDVEQLQVAFPIRKGILK---RTVDHNVVVKNISFT 308 (529)
T ss_pred -------c-----------c----C--C----CCCC-------cccccCcEEEeecCccccc---cccccceeeecceeE
Confidence 0 0 0 0 0000 1222233322210000 00 000135699999999
Q ss_pred EeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---h---cccceEEEEccCC--CCCCCCCHHHHH
Q 001400 852 FRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---E---TFARISGYCEQND--IHSPGLTVLESL 923 (1085)
Q Consensus 852 i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~---~~~~~~gy~~Q~~--~~~~~~tv~e~l 923 (1085)
|++||++||+|+||||||||+++|+|..+ .+|+|+++|.++.. . .+++.+||++|++ .+++.+||.||+
T Consensus 309 i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l 385 (529)
T PRK15134 309 LRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQII 385 (529)
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHH
Confidence 99999999999999999999999999763 47999999987532 1 1356799999997 367889999999
Q ss_pred HHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHH
Q 001400 924 LFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1085)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~ 1002 (1085)
.++...+.. .......++.++++++.+++. ...+.. +..|||||||||+|||||+.+|+||||||||+|||+.
T Consensus 386 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~ 459 (529)
T PRK15134 386 EEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKT 459 (529)
T ss_pred HHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHH
Confidence 886432211 112233445678899999996 344543 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 1003 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 1003 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
++..+++.|++++++ |.|||++|||++ .+.+.||++++|++ |+++..|+.
T Consensus 460 ~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 460 VQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999999999765 899999999986 47778999999985 688888864
No 23
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.4e-64 Score=609.39 Aligned_cols=454 Identities=19% Similarity=0.267 Sum_probs=339.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|. +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999998876 9999999988754321 2469999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.|.... .. .....++++++.+||++..+..++
T Consensus 101 ~tv~e~l~~~~~~------~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (510)
T PRK15439 101 LSVKENILFGLPK------RQ--------------------------------ASMQKMKQLLAALGCQLDLDSSAG--- 139 (510)
T ss_pred CcHHHHhhccccc------ch--------------------------------HHHHHHHHHHHHcCCCccccCChh---
Confidence 9999999875310 00 001236778999999877776554
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+.+++.++||+|++|++
T Consensus 140 --~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 140 --SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQ--GVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 69999999999999999999999999999999999999999999998753 45666688999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcC
Q 001400 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1085)
Q Consensus 384 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1085)
|++++.|+.+++... +.. +.+...
T Consensus 216 G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~~------------ 239 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------DII-----------------------------QAITPA------------ 239 (510)
T ss_pred CEEEEecChHHcCHH---------------HHH-----------------------------HHHhCc------------
Confidence 999999876543210 000 000000
Q ss_pred cccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHHH
Q 001400 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1085)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1085)
. .. . .....
T Consensus 240 ----~-~~-------------------------------------------------------~-----~~~~~------ 248 (510)
T PRK15439 240 ----A-RE-------------------------------------------------------K-----SLSAS------ 248 (510)
T ss_pred ----c-cc-------------------------------------------------------c-----ccccc------
Confidence 0 00 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHHH
Q 001400 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1085)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~ 623 (1085)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCCc
Q 001400 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1085)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~~ 703 (1085)
. .
T Consensus 249 ---------------------------------------------------~---------------------------~ 250 (510)
T PRK15439 249 ---------------------------------------------------Q---------------------------K 250 (510)
T ss_pred ---------------------------------------------------c---------------------------c
Confidence 0 0
Q ss_pred ccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcc
Q 001400 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1085)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1085)
.. ..+
T Consensus 251 ~~-----------------~~~---------------------------------------------------------- 255 (510)
T PRK15439 251 LW-----------------LEL---------------------------------------------------------- 255 (510)
T ss_pred cc-----------------ccc----------------------------------------------------------
Confidence 00 000
Q ss_pred hhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEcc
Q 001400 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1085)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~ 863 (1085)
+.. .... +. + +..+..++++. .+|+||||+|++|+++||+|+
T Consensus 256 --------~~~--~~~~---~~-~------~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~ 297 (510)
T PRK15439 256 --------PGN--RRQQ---AA-G------APVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGV 297 (510)
T ss_pred --------ccc--cccc---CC-C------CceEEEeCCCC------------------CCccceeEEEcCCcEEEEECC
Confidence 000 0000 00 0 00123333320 147899999999999999999
Q ss_pred CCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh----cccceEEEEccCC---CCCCCCCHHHHHHHhhhhcCCCccc
Q 001400 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESLLFSAWLRLPSEIE 936 (1085)
Q Consensus 864 nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gy~~Q~~---~~~~~~tv~e~l~~~~~~~~~~~~~ 936 (1085)
||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+......
T Consensus 298 NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~ 375 (510)
T PRK15439 298 VGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIK 375 (510)
T ss_pred CCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccC
Confidence 99999999999999865 4589999999865321 1345689999984 4778899999986421111010001
Q ss_pred HHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH
Q 001400 937 LETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIV 1015 (1085)
Q Consensus 937 ~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~ 1015 (1085)
....++.++++++.+++. +..+..+ ..|||||||||+|||||+.+|+||||||||+|||+.+++.+++.|++++
T Consensus 376 ~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~ 450 (510)
T PRK15439 376 PARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIA 450 (510)
T ss_pred hHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHH
Confidence 122335578899999986 5555543 5799999999999999999999999999999999999999999999998
Q ss_pred HCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 1016 NTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 1016 ~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
++|.|||++|||++ .+.+.||++++|++ |++++.|..++
T Consensus 451 ~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~~ 489 (510)
T PRK15439 451 AQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGAA 489 (510)
T ss_pred hCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcccc
Confidence 78999999999987 47788999999985 78998887654
No 24
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.8e-64 Score=608.84 Aligned_cols=460 Identities=20% Similarity=0.294 Sum_probs=339.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
+++|+|+|+.+++|++++|+|||||||||||++|+|.+++. +.+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 46999999999999999999999999999999999988751 238999999988754321 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccc-cccccCc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA-DTLVGDE 302 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg~~ 302 (1085)
+||+||+.++......+...+ . .....+++++++.+||.+.. ++.+
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMA------Y------------------------NAMYLRAKNLLRELQLDADNVTRPV--- 139 (500)
T ss_pred CcHHHHHHhhccccccccccC------H------------------------HHHHHHHHHHHHHcCCCCCcccCch---
Confidence 999999988643210000000 0 00122477889999997654 3334
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.++||+|++|+
T Consensus 140 --~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tviiitHd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 140 --GDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAH--GVACVYISHKLNEVKAVCDTICVIR 215 (500)
T ss_pred --hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 469999999999999999999999999999999999999999999998753 4556668899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhc
Q 001400 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1085)
+|++++.|+.+++.. ....+.
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 236 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDIITM--------------- 236 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHHHH---------------
Confidence 999987764321100 000000
Q ss_pred CcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHH
Q 001400 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1085)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g 542 (1085)
+....
T Consensus 237 -------------------------------------------------------------~~~~~-------------- 241 (500)
T TIGR02633 237 -------------------------------------------------------------MVGRE-------------- 241 (500)
T ss_pred -------------------------------------------------------------HhCcc--------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHH
Q 001400 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1085)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~ 622 (1085)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCC
Q 001400 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1085)
Q Consensus 623 ~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~ 702 (1085)
.+
T Consensus 242 ---------------------------------------------------~~--------------------------- 243 (500)
T TIGR02633 242 ---------------------------------------------------IT--------------------------- 243 (500)
T ss_pred ---------------------------------------------------cc---------------------------
Confidence 00
Q ss_pred cccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCc
Q 001400 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1085)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1085)
. ..
T Consensus 244 -------~--------------~~-------------------------------------------------------- 246 (500)
T TIGR02633 244 -------S--------------LY-------------------------------------------------------- 246 (500)
T ss_pred -------c--------------cc--------------------------------------------------------
Confidence 0 00
Q ss_pred chhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEc
Q 001400 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1085)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G 862 (1085)
+.. . .. ... ..+.++|+++.+. ..++..+|+|+||+|++||++||+|
T Consensus 247 ---------~~~--~-~~----~~~-------~~l~~~~l~~~~~----------~~~~~~~l~~is~~i~~Ge~~~l~G 293 (500)
T TIGR02633 247 ---------PHE--P-HE----IGD-------VILEARNLTCWDV----------INPHRKRVDDVSFSLRRGEILGVAG 293 (500)
T ss_pred ---------ccc--c-cC----CCC-------ceEEEeCCccccc----------ccccccccccceeEEeCCcEEEEeC
Confidence 000 0 00 000 0122333322110 0012458999999999999999999
Q ss_pred cCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHhhhhcCC--C
Q 001400 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRLP--S 933 (1085)
Q Consensus 863 ~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~---~~~~~~tv~e~l~~~~~~~~~--~ 933 (1085)
+||||||||+++|+|..++ +.+|+|.++|.++.. ...++.+||++|++ .+++.+||+||+.++..-... .
T Consensus 294 ~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~ 372 (500)
T TIGR02633 294 LVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKM 372 (500)
T ss_pred CCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCC
Confidence 9999999999999998652 247999999987532 23456799999995 478899999999875321110 0
Q ss_pred cccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 001400 934 EIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1085)
Q Consensus 934 ~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~ 1012 (1085)
........+.++++++.+++.+ ..+..+ ..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+
T Consensus 373 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 447 (500)
T TIGR02633 373 RIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLIN 447 (500)
T ss_pred cCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHH
Confidence 1122333456788999999853 344433 5799999999999999999999999999999999999999999999
Q ss_pred HHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 1013 ~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+++++|.|||++|||++ ++.+.||++++|++ |+++..++..
T Consensus 448 ~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 448 QLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred HHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99888999999999987 47788999999985 6888777654
No 25
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.3e-64 Score=610.42 Aligned_cols=200 Identities=25% Similarity=0.350 Sum_probs=164.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEc-Ccc---CCh------hcccceEEEEccCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYIS-GYP---KRQ------ETFARISGYCEQND 911 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~-g~~---~~~------~~~~~~~gy~~Q~~ 911 (1085)
..+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++ |.+ ... ...++.+||++|++
T Consensus 297 ~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~ 374 (520)
T TIGR03269 297 VKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEY 374 (520)
T ss_pred ceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCc
Confidence 469999999999999999999999999999999999865 468999996 532 111 12345699999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-----ccccccCCCCCCCCCHHHHHHHHHHHHHhcC
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-----LSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~ 986 (1085)
.+++.+||.||+.+...+. .......+.+.++++.+++.+ ..+.. +.+|||||||||+|||||+.+
T Consensus 375 ~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq~qrv~laral~~~ 445 (520)
T TIGR03269 375 DLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGERHRVALAQVLIKE 445 (520)
T ss_pred ccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHHHHHHHHHHHHhcC
Confidence 8889999999998753221 112223456788999999864 23333 357999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 987 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|+||||||||+|||+.+++.+++.|++++++ |.|||++|||++ .+.+.||++++|++ |+++..|+.
T Consensus 446 p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 446 PRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVKIGDP 512 (520)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999999999999999764 899999999987 47788999999985 688888764
No 26
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-64 Score=606.75 Aligned_cols=453 Identities=20% Similarity=0.293 Sum_probs=339.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC----CCceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1085)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999998776 999999998875322 24579999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.++......+. . +. .+...+++++++.+||++..+..+
T Consensus 94 ~tv~~~l~~~~~~~~~~~-~----------------~~--------------~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-V----------------NR--------------RLLNYEAREQLEHLGVDIDPDTPL---- 138 (501)
T ss_pred CCHHHHHHhcccccccCC-C----------------CH--------------HHHHHHHHHHHHHcCCCCCcCCch----
Confidence 999999988532100000 0 00 001224778899999987666554
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++..+||+|++|++
T Consensus 139 -~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 139 -KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAE--GRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998653 45566688999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhcC
Q 001400 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1085)
Q Consensus 384 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1085)
|+++..++.... . +..+..+.
T Consensus 216 G~i~~~~~~~~~------------------------------~-------------~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ------------------------------V-------------DRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc------------------------------C-------------CHHHHHHH----------------
Confidence 999865421000 0 00000000
Q ss_pred cccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHHH
Q 001400 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1085)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1085)
+.... .
T Consensus 237 ------------------------------------------------------------~~~~~-----~--------- 242 (501)
T PRK11288 237 ------------------------------------------------------------MVGRE-----I--------- 242 (501)
T ss_pred ------------------------------------------------------------hcCCC-----c---------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHHH
Q 001400 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1085)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~~ 623 (1085)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCCc
Q 001400 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1085)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~~ 703 (1085)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcc
Q 001400 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1085)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1085)
. . .. . .
T Consensus 243 -~----~--------------~~-------------------------------~------------------------~ 248 (501)
T PRK11288 243 -G----D--------------IY-------------------------------G------------------------Y 248 (501)
T ss_pred -c----c--------------cc-------------------------------c------------------------c
Confidence 0 0 00 0 0
Q ss_pred hhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEcc
Q 001400 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1085)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~ 863 (1085)
. + . . . .+..+.++++++ ..+++|+||+|++||++||+||
T Consensus 249 -~------~----~--~----~-------~~~~l~~~~~~~-----------------~~~l~~isl~i~~Ge~~~iiG~ 287 (501)
T PRK11288 249 -R------P----R--P----L-------GEVRLRLDGLKG-----------------PGLREPISFSVRAGEIVGLFGL 287 (501)
T ss_pred -c------c----c--C----C-------CCcEEEEecccc-----------------CCcccceeEEEeCCcEEEEEcC
Confidence 0 0 0 0 0 001123333321 1378999999999999999999
Q ss_pred CCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHhhhhcC-CCc-
Q 001400 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRL-PSE- 934 (1085)
Q Consensus 864 nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~---~~~~~~tv~e~l~~~~~~~~-~~~- 934 (1085)
||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++ .+++.+|+.||+.++..... +..
T Consensus 288 NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 365 (501)
T PRK11288 288 VGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGC 365 (501)
T ss_pred CCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhccccc
Confidence 99999999999999865 468999999986532 12346799999986 47888999999987532111 000
Q ss_pred -ccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 001400 935 -IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1085)
Q Consensus 935 -~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~ 1012 (1085)
......++.++++++.+++. +..+..+ ..|||||||||+|||+|+.+|+||||||||+|||+.++..+++.|+
T Consensus 366 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 440 (501)
T PRK11288 366 LINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIY 440 (501)
T ss_pred ccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHH
Confidence 01222335678899999984 4555543 5799999999999999999999999999999999999999999999
Q ss_pred HHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCch
Q 001400 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKS 1058 (1085)
Q Consensus 1013 ~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~~ 1058 (1085)
+++++|.|||++|||++ ++.+.||++++|++ |++++.|..++-+
T Consensus 441 ~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~~ 484 (501)
T PRK11288 441 ELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQAT 484 (501)
T ss_pred HHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccCC
Confidence 99888999999999987 47788999999984 7899999876543
No 27
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.2e-63 Score=654.89 Aligned_cols=209 Identities=20% Similarity=0.264 Sum_probs=173.2
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 895 (1085)
.+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|+|... .+|+|.|||.++
T Consensus 1217 ~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~di 1282 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVSW 1282 (1490)
T ss_pred eEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEc
Confidence 5777887776631 23579999999999999999999999999999999999864 479999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------ccccCCCC
Q 001400 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1085)
Q Consensus 896 ~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~ 965 (1085)
.. ..+++.++|+||++.++++ |++|||.... ...++.++++++.+++.+.. |..++. +
T Consensus 1283 ~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~----------~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e-~ 1350 (1490)
T TIGR01271 1283 NSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE----------QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD-G 1350 (1490)
T ss_pred ccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc----------CCCHHHHHHHHHHCCCHHHHHhCcccccccccc-C
Confidence 53 4578899999999999976 9999995321 11234578889888885432 333333 2
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 966 ~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
+.+||||||||+||||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|++|++
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~- 1426 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG- 1426 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999864 5899999999975 5677999999985
Q ss_pred cEEEEecCC
Q 001400 1046 GELIYAGPL 1054 (1085)
Q Consensus 1046 G~~~~~g~~ 1054 (1085)
|+++..|+.
T Consensus 1427 G~ivE~g~p 1435 (1490)
T TIGR01271 1427 SSVKQYDSI 1435 (1490)
T ss_pred CEEEEeCCH
Confidence 789888874
No 28
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.2e-63 Score=657.54 Aligned_cols=211 Identities=22% Similarity=0.274 Sum_probs=173.9
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 895 (1085)
.+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1308 ~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~di 1374 (1560)
T PTZ00243 1308 SLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGREI 1374 (1560)
T ss_pred eEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEc
Confidence 4677777766521 22459999999999999999999999999999999999876 5689999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------ccccCCCC
Q 001400 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1085)
Q Consensus 896 ~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~ 965 (1085)
.. ..+++.+||+||++.+|.+ |++|||.... +. .++.++++++.+++.+.. |..++. +
T Consensus 1375 ~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~~------~~----sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge-~ 1442 (1560)
T PTZ00243 1375 GAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPFL------EA----SSAEVWAALELVGLRERVASESEGIDSRVLE-G 1442 (1560)
T ss_pred ccCCHHHHHhcceEECCCCccccc-cHHHHhCccc------CC----CHHHHHHHHHHCCChHHHhhCcccccccccC-C
Confidence 53 5678899999999999876 9999995311 11 234578888888886542 333333 2
Q ss_pred CCCCCHHHHHHHHHHHHHhcC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEec
Q 001400 966 INGLSTEQRKRLTIAVELVAN-PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1085)
Q Consensus 966 ~~~LS~Gqrqrl~iA~aL~~~-p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~ 1044 (1085)
+.+||||||||+||||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|++|++
T Consensus 1443 G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd~ 1519 (1560)
T PTZ00243 1443 GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMDH 1519 (1560)
T ss_pred cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEEC
Confidence 357999999999999999996 89999999999999999999999999864 5899999999974 6678999999985
Q ss_pred CcEEEEecCCC
Q 001400 1045 GGELIYAGPLG 1055 (1085)
Q Consensus 1045 gG~~~~~g~~~ 1055 (1085)
|++++.|+..
T Consensus 1520 -G~VvE~Gt~~ 1529 (1560)
T PTZ00243 1520 -GAVAEMGSPR 1529 (1560)
T ss_pred -CEEEEECCHH
Confidence 7999988753
No 29
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-63 Score=596.69 Aligned_cols=451 Identities=18% Similarity=0.264 Sum_probs=336.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC----CCceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1085)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999998876 999999998875432 13579999999888899
Q ss_pred CCHHHHHHHhhh-hcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 224 MTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 224 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
+||+||+.++.. ..+.. .+ . .+....++++++.+||++..++.+
T Consensus 88 ~tv~~~l~~~~~~~~~~~--~~----------------~--------------~~~~~~~~~~l~~~~l~~~~~~~~--- 132 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF--VD----------------Q--------------DKMYRDTKAIFDELDIDIDPRAKV--- 132 (491)
T ss_pred CCHHHHhhcccccccccc--cC----------------H--------------HHHHHHHHHHHHHcCCCCCccCch---
Confidence 999999987531 11000 00 0 001124778899999987766655
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.+|+.++|+.+++..+||+|++|+
T Consensus 133 --~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 133 --ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKER--GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998653 4456668899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhc
Q 001400 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1085)
+|+++..|+.+++.. .+..+.+
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~-------------- 230 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAMM-------------- 230 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHHH--------------
Confidence 999998876432100 0000000
Q ss_pred CcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHH
Q 001400 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1085)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g 542 (1085)
....
T Consensus 231 --------------------------------------------------------------~~~~-------------- 234 (491)
T PRK10982 231 --------------------------------------------------------------VGRS-------------- 234 (491)
T ss_pred --------------------------------------------------------------hCCC--------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHH
Q 001400 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1085)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~ 622 (1085)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCC
Q 001400 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1085)
Q Consensus 623 ~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~ 702 (1085)
+
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred cccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCc
Q 001400 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1085)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1085)
. ..+
T Consensus 236 --~-----------------~~~--------------------------------------------------------- 239 (491)
T PRK10982 236 --T-----------------QRF--------------------------------------------------------- 239 (491)
T ss_pred --c-----------------ccc---------------------------------------------------------
Confidence 0 000
Q ss_pred chhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEc
Q 001400 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1085)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G 862 (1085)
+.. . .. + .+..+.++|+++. ...+|+||||+|++||++||+|
T Consensus 240 ---------~~~--~-~~---~--------~~~~i~~~~l~~~---------------~~~~l~~vsl~i~~Ge~~~l~G 281 (491)
T PRK10982 240 ---------PDK--E-NK---P--------GEVILEVRNLTSL---------------RQPSIRDVSFDLHKGEILGIAG 281 (491)
T ss_pred ---------ccc--c-CC---C--------CCcEEEEeCcccc---------------cCcccceeeEEEeCCcEEEEec
Confidence 000 0 00 0 0012334444332 1248999999999999999999
Q ss_pred cCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh----cccceEEEEccCC---CCCCCCCHHHHHHHhhh--hcCCC
Q 001400 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESLLFSAW--LRLPS 933 (1085)
Q Consensus 863 ~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gy~~Q~~---~~~~~~tv~e~l~~~~~--~~~~~ 933 (1085)
+||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|++ .+++.+|+.+|..+... .....
T Consensus 282 ~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (491)
T PRK10982 282 LVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKV 359 (491)
T ss_pred CCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccc
Confidence 999999999999999876 4689999999775421 2345689999985 35778888877433210 00000
Q ss_pred c-ccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 001400 934 E-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTV 1011 (1085)
Q Consensus 934 ~-~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l 1011 (1085)
. .......+.+.++++.+++. +..+.. +.+|||||||||+|||+|+.+|+||||||||+|||+.++..+++.|
T Consensus 360 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l 434 (491)
T PRK10982 360 GLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLI 434 (491)
T ss_pred cccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHH
Confidence 1 11222345567888888884 334433 3579999999999999999999999999999999999999999999
Q ss_pred HHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 1012 RNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 1012 ~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
+++.++|.|||++|||++ ++.+.||++++|++ |+++..++...
T Consensus 435 ~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~~ 477 (491)
T PRK10982 435 AELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTKT 477 (491)
T ss_pred HHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 999888999999999987 47788999999985 68887776543
No 30
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-61 Score=521.93 Aligned_cols=472 Identities=22% Similarity=0.316 Sum_probs=359.9
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCC--CCceeeEEEECCccCCCCCC-------CceEEEEcc
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEFVP-------PRTSAYVSQ 216 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q 216 (1085)
..+.++++|||.|++||.++|+|.||||||-..+.+.|+++. ....+|+|.|+|.++-.... ...|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999876 23458999999998744432 247999999
Q ss_pred CCC--CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccc
Q 001400 217 QDW--QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 294 (1085)
Q Consensus 217 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 294 (1085)
+|- +-|-.|+..-|.-..+++... .....+.++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg~---------------------------------~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRGL---------------------------------SRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhcc---------------------------------cHHHHHHHHHHHHHHcCCCch
Confidence 983 567678877776555543211 112234568889999999876
Q ss_pred ccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhh
Q 001400 295 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 374 (1085)
Q Consensus 295 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~ 374 (1085)
...+ +.++.+|||||||||.||.||+.+|++|+-||||++||...+.+|.+.|+++..++ +..++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~-gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAEL-GMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHh-CcEEEEEeccHHHHHHh
Confidence 5443 46788999999999999999999999999999999999999999999999998876 45666799999999999
Q ss_pred cCeEEEecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccc
Q 001400 375 FDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTG 454 (1085)
Q Consensus 375 ~D~ii~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (1085)
+|+|+||.+|+++++|+.+.+.. .|.+ ||+.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYTr---------------- 255 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYTR---------------- 255 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHHH----------------
Confidence 99999999999999998766531 1111 1100
Q ss_pred cchhhhhcCcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcc
Q 001400 455 KNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTI 534 (1085)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~ 534 (1085)
.+.+. .|. ..+
T Consensus 256 -~Ll~a--eP~----g~~-------------------------------------------------------------- 266 (534)
T COG4172 256 -KLLAA--EPS----GDP-------------------------------------------------------------- 266 (534)
T ss_pred -HHHhc--CCC----CCC--------------------------------------------------------------
Confidence 00000 000 000
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccc
Q 001400 535 DDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDP 614 (1085)
Q Consensus 535 ~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~ 614 (1085)
T Consensus 267 -------------------------------------------------------------------------------- 266 (534)
T COG4172 267 -------------------------------------------------------------------------------- 266 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHH
Q 001400 615 NVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAA 694 (1085)
Q Consensus 615 ~~~~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~ 694 (1085)
T Consensus 267 -------------------------------------------------------------------------------- 266 (534)
T COG4172 267 -------------------------------------------------------------------------------- 266 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcCCcccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhh
Q 001400 695 SVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQE 774 (1085)
Q Consensus 695 ~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 774 (1085)
T Consensus 267 -------------------------------------------------------------------------------- 266 (534)
T COG4172 267 -------------------------------------------------------------------------------- 266 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhcCcchhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeC
Q 001400 775 RDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRP 854 (1085)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~ 854 (1085)
.+ .+ +-.|.-+..+++.-..+....+- .-..+...++++||+++++
T Consensus 267 -------------------------~p-~~------~~~~~ll~~~~v~v~f~i~~g~~--~r~~~~~~AVd~isl~L~~ 312 (534)
T COG4172 267 -------------------------PP-LP------EDAPVLLEVEDLRVWFPIKGGFL--RRTVDHLRAVDGISLTLRR 312 (534)
T ss_pred -------------------------CC-CC------CCCCceEEecceEEEEecCCccc--cccchheEEeccceeEecC
Confidence 00 00 00001111111111111110000 0011346789999999999
Q ss_pred CeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCC--CCCCCCHHHHHHHh
Q 001400 855 GVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDI--HSPGLTVLESLLFS 926 (1085)
Q Consensus 855 Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~--~~~~~tv~e~l~~~ 926 (1085)
||.+||||.||||||||-.+|.++..+ +|+|.++|.++.. ...++.+-.|||+|. +.|.+||.+-+.-+
T Consensus 313 gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EG 389 (534)
T COG4172 313 GQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEG 389 (534)
T ss_pred CCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhh
Confidence 999999999999999999999998753 5999999998753 235678899999985 57999999998877
Q ss_pred hhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHH
Q 001400 927 AWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAI 1006 (1085)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~ 1006 (1085)
.....+ ..+..++++++.++|+.+||.+-.- ...| .++|||||||++|||||+.+|++++||||||+||-.-+.+
T Consensus 390 L~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r--~RYP--hEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQ 464 (534)
T COG4172 390 LRVHEP-KLSAAERDQRVIEALEEVGLDPATR--NRYP--HEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQ 464 (534)
T ss_pred hhhcCC-CCCHHHHHHHHHHHHHHcCCChhHh--hcCC--cccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHH
Confidence 665544 4567788899999999999976432 2233 5799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 1007 VMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 1007 i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|.++++++.+ .|.+-++||||+.. +...||+++||++ |+|++.||..
T Consensus 465 vv~LLr~LQ~k~~LsYLFISHDL~V-vrAl~~~viVm~~-GkiVE~G~~~ 512 (534)
T COG4172 465 VLDLLRDLQQKHGLSYLFISHDLAV-VRALCHRVIVMRD-GKIVEQGPTE 512 (534)
T ss_pred HHHHHHHHHHHhCCeEEEEeccHHH-HHHhhceEEEEeC-CEEeeeCCHH
Confidence 9999999975 59999999999864 6778999999985 7999999964
No 31
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=6e-62 Score=585.46 Aligned_cols=446 Identities=19% Similarity=0.267 Sum_probs=322.7
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCC--C--
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQ--V-- 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~--~-- 221 (1085)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 5999999999999999999999999999999999998876 999999997654322 12458999998542 1
Q ss_pred ----CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccc
Q 001400 222 ----AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1085)
Q Consensus 222 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1085)
..+||+|++.+.. ....+++++++.+||++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1467777764310 001236778999999887776
Q ss_pred cccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCe
Q 001400 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1085)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1085)
.++ .|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.++||+
T Consensus 132 ~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tvii~tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQS--GITLVLVLNRFDEIPDFVQF 204 (490)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHhhCCE
Confidence 654 69999999999999999999999999999999999999999999998753 44566688999999999999
Q ss_pred EEEecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccch
Q 001400 378 VILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNL 457 (1085)
Q Consensus 378 ii~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (1085)
|++|++|++++.|+++++.+- +.+..+..
T Consensus 205 v~~l~~G~i~~~~~~~~~~~~---------------~~~~~~~~------------------------------------ 233 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQQ---------------ALVAQLAH------------------------------------ 233 (490)
T ss_pred EEEEECCEEEEeCCHHHHhcc---------------hhhhhhhh------------------------------------
Confidence 999999999999876543210 00000000
Q ss_pred hhhhcCcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccc
Q 001400 458 SEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDG 537 (1085)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~ 537 (1085)
. .....
T Consensus 234 ------------------------------------~-------------------------------------~~~~~- 239 (490)
T PRK10938 234 ------------------------------------S-------------------------------------EQLEG- 239 (490)
T ss_pred ------------------------------------h-------------------------------------hccCc-
Confidence 0 00000
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHH
Q 001400 538 GLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVV 617 (1085)
Q Consensus 538 ~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~ 617 (1085)
T Consensus 240 -------------------------------------------------------------------------------- 239 (490)
T PRK10938 240 -------------------------------------------------------------------------------- 239 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHh
Q 001400 618 RFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVN 697 (1085)
Q Consensus 618 ~f~~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~n 697 (1085)
. ..|
T Consensus 240 ---------------------------------------------------~---~~~---------------------- 243 (490)
T PRK10938 240 ---------------------------------------------------V---QLP---------------------- 243 (490)
T ss_pred ---------------------------------------------------c---ccC----------------------
Confidence 0 000
Q ss_pred hhcCCcccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhh
Q 001400 698 EFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDR 777 (1085)
Q Consensus 698 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 777 (1085)
. ..
T Consensus 244 ------------~--------------------------------------------------------~~--------- 246 (490)
T PRK10938 244 ------------E--------------------------------------------------------PD--------- 246 (490)
T ss_pred ------------c--------------------------------------------------------cc---------
Confidence 0 00
Q ss_pred hhcCcchhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeE
Q 001400 778 RRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVL 857 (1085)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~ 857 (1085)
+. . ... . .+. ....+.++|+++. +++..+|+|+||+|++||+
T Consensus 247 ----~~-~------~~~----~---~~~-------~~~~l~~~~l~~~-------------~~~~~il~~vsl~i~~Ge~ 288 (490)
T PRK10938 247 ----EP-S------ARH----A---LPA-------NEPRIVLNNGVVS-------------YNDRPILHNLSWQVNPGEH 288 (490)
T ss_pred ----cc-c------ccc----c---cCC-------CCceEEEeceEEE-------------ECCeeEEeeceEEEcCCCE
Confidence 00 0 000 0 000 0011334444333 2345699999999999999
Q ss_pred EEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCCCCCC--CCCHHHHHHHhhhh--
Q 001400 858 TALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP--GLTVLESLLFSAWL-- 929 (1085)
Q Consensus 858 ~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~~~~~--~~tv~e~l~~~~~~-- 929 (1085)
+||+||||||||||+++|+|..+. ..+|+|+++|.+... ...++.+||++|++.+++ ..++.+++.+....
T Consensus 289 ~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~ 367 (490)
T PRK10938 289 WQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSI 367 (490)
T ss_pred EEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhcccccc
Confidence 999999999999999999996531 147999999976421 123567999999876543 35676666543211
Q ss_pred cCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHH
Q 001400 930 RLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVM 1008 (1085)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~ 1008 (1085)
....... ....+.++++++.+++.+ ..+..+ ..|||||||||+|||||+.+|+||||||||+|||+.++..++
T Consensus 368 ~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~ 441 (490)
T PRK10938 368 GIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVR 441 (490)
T ss_pred ccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHH
Confidence 0111111 223456788999999976 555443 579999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCC-ceEEEEecCccHHHHH-hcCEEEEEecCcEEEEe
Q 001400 1009 RTVRNIVNTG-RTIVCTIHQPSIDIFE-SFDELLFMKRGGELIYA 1051 (1085)
Q Consensus 1009 ~~l~~~~~~g-~tvi~~~H~~~~~~~~-~~d~il~l~~gG~~~~~ 1051 (1085)
+.|++++++| .|||++|||++ ++.+ .+|++++|++ |++++.
T Consensus 442 ~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 442 RFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred HHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 9999998776 46999999986 3555 4899999986 566554
No 32
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.1e-60 Score=573.81 Aligned_cols=191 Identities=19% Similarity=0.253 Sum_probs=155.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCC-CCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLT 918 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~-~~~~~~t 918 (1085)
+++.+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.+++. ..+||++|++ .+++.+|
T Consensus 335 ~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~~~t 404 (556)
T PRK11819 335 GDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET--------VKLAYVDQSRDALDPNKT 404 (556)
T ss_pred CCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--------eEEEEEeCchhhcCCCCC
Confidence 45679999999999999999999999999999999999866 46899998542 1589999986 6778899
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
|+|++.+....... ... .....++++.+++.+ ..+.. +..||||||||++|||||+.+|++|||||||+
T Consensus 405 v~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 474 (556)
T PRK11819 405 VWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGERNRLHLAKTLKQGGNVLLLDEPTN 474 (556)
T ss_pred HHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 99999876422111 111 122456888888853 33443 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEE-EecCC
Q 001400 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~-~~g~~ 1054 (1085)
|||+.++..+++.|+++ . .|||++|||++ .+...||++++|++||+++ +.|+.
T Consensus 475 ~LD~~~~~~l~~~l~~~--~-~tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g~~ 528 (556)
T PRK11819 475 DLDVETLRALEEALLEF--P-GCAVVISHDRW-FLDRIATHILAFEGDSQVEWFEGNF 528 (556)
T ss_pred CCCHHHHHHHHHHHHhC--C-CeEEEEECCHH-HHHHhCCEEEEEECCCeEEEecCCH
Confidence 99999999999999986 2 48999999986 4778899999998767776 55543
No 33
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-59 Score=568.75 Aligned_cols=188 Identities=19% Similarity=0.262 Sum_probs=154.6
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCC--CCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI--HSPG 916 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~--~~~~ 916 (1085)
+++..+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|. +.+||++|++. +.+.
T Consensus 329 ~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~--------~~i~~~~q~~~~~~~~~ 398 (530)
T PRK15064 329 FDNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN--------ANIGYYAQDHAYDFEND 398 (530)
T ss_pred eCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--------eEEEEEcccccccCCCC
Confidence 345579999999999999999999999999999999999865 46899999873 46899999864 4567
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
+|++|++.+.. ... ...+.++++++.+++. +..+.. +..||||||||++|||+|+.+|+|||||||
T Consensus 399 ~t~~~~~~~~~---~~~-----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~lllLDEP 465 (530)
T PRK15064 399 LTLFDWMSQWR---QEG-----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGGEKGRMLFGKLMMQKPNVLVMDEP 465 (530)
T ss_pred CcHHHHHHHhc---cCC-----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 89999986421 111 1124467889999884 444443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEE-EecCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~-~~g~~ 1054 (1085)
|+|||+.++..+++.|+++ +.|||++|||++ .+...||++++|++ |+++ +.|+.
T Consensus 466 t~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~g~~ 520 (530)
T PRK15064 466 TNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFSGTY 520 (530)
T ss_pred CCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcCCCH
Confidence 9999999999999999986 459999999986 47778999999986 5665 77753
No 34
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.6e-59 Score=567.70 Aligned_cols=191 Identities=19% Similarity=0.248 Sum_probs=154.8
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCC-CCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLT 918 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~-~~~~~~t 918 (1085)
++..+|+||||+|++|+++||+|+||||||||+++|+|... +.+|+|.+++. ..+||++|++ .+++.+|
T Consensus 333 ~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~~~t 402 (552)
T TIGR03719 333 GDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET--------VKLAYVDQSRDALDPNKT 402 (552)
T ss_pred CCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--------eEEEEEeCCccccCCCCc
Confidence 45679999999999999999999999999999999999865 46899998542 1589999986 4778899
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
++|++.+....... ... .....++++.+++.+ ..+.. +..|||||||||+|||+|+.+|++|||||||+
T Consensus 403 v~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe~qrv~la~al~~~p~lllLDEPt~ 472 (552)
T TIGR03719 403 VWEEISGGLDIIQL---GKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGERNRVHLAKTLKSGGNVLLLDEPTN 472 (552)
T ss_pred HHHHHHhhcccccc---Ccc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Confidence 99999876422111 111 122457888888853 33443 25799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEE-EecCC
Q 001400 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~-~~g~~ 1054 (1085)
|||+.++..+++.|+++ +.|||++|||++ .+...||++++|++||+++ +.|+.
T Consensus 473 ~LD~~~~~~l~~~l~~~---~~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g~~ 526 (552)
T TIGR03719 473 DLDVETLRALEEALLEF---AGCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEGNY 526 (552)
T ss_pred CCCHHHHHHHHHHHHHC---CCeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCCCH
Confidence 99999999999999987 248999999986 4777899999998767776 55543
No 35
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-57 Score=553.17 Aligned_cols=187 Identities=22% Similarity=0.343 Sum_probs=151.6
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCC--CCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND--IHSPG 916 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~--~~~~~ 916 (1085)
+++..+|+|+||+|++|+++||+||||||||||+++|+|... +.+|+|.+++. ..+||++|+. .+.+.
T Consensus 322 y~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~--------~~igy~~Q~~~~~l~~~ 391 (638)
T PRK10636 322 YGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG--------IKLGYFAQHQLEFLRAD 391 (638)
T ss_pred eCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--------EEEEEecCcchhhCCcc
Confidence 345679999999999999999999999999999999999876 46899998742 2589999974 34456
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.|+.+++.. .. + ......+.++++.+++.. ..+.. +..|||||||||+||++|+.+|+|||||||
T Consensus 392 ~~~~~~~~~---~~-~-----~~~~~~~~~~L~~~~l~~~~~~~~-----~~~LSgGekqRl~La~~l~~~p~lLlLDEP 457 (638)
T PRK10636 392 ESPLQHLAR---LA-P-----QELEQKLRDYLGGFGFQGDKVTEE-----TRRFSGGEKARLVLALIVWQRPNLLLLDEP 457 (638)
T ss_pred chHHHHHHH---hC-c-----hhhHHHHHHHHHHcCCChhHhcCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 678777531 11 1 112345678888888853 34443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEE-EecCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~-~~g~~ 1054 (1085)
|+|||+.+...+.++|+++ +.|||+||||+. .+...||++++|++ |+++ +.|+.
T Consensus 458 t~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~g~~ 512 (638)
T PRK10636 458 TNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFDGDL 512 (638)
T ss_pred CCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcCCCH
Confidence 9999999999999999987 349999999986 47788999999985 5665 77765
No 36
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.1e-57 Score=551.71 Aligned_cols=200 Identities=23% Similarity=0.212 Sum_probs=163.7
Q ss_pred EeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHH
Q 001400 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESL 923 (1085)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e~l 923 (1085)
.|+++||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++ ..+||++|+..+.+.+||+|++
T Consensus 354 ~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~----------~~i~y~~Q~~~~~~~~tv~e~l 421 (590)
T PRK13409 354 SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE----------LKISYKPQYIKPDYDGTVEDLL 421 (590)
T ss_pred EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----------eeEEEecccccCCCCCcHHHHH
Confidence 4889999999999999999999999999999999876 468999886 1489999998888899999999
Q ss_pred HHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHH
Q 001400 924 LFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARA 1003 (1085)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~ 1003 (1085)
.+..... .. ...++++++.+++.+..+..+ ..|||||||||+|||||+.+|+||||||||+|||+.+
T Consensus 422 ~~~~~~~-----~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~ 488 (590)
T PRK13409 422 RSITDDL-----GS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQ 488 (590)
T ss_pred HHHhhhc-----Ch---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHH
Confidence 8642111 11 124678999999987666543 5799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc---hHHHHHHHHhccccc
Q 001400 1004 AAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK---SCELIKYFEVESFMF 1072 (1085)
Q Consensus 1004 ~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~---~~~~~~~~~~~~g~~ 1072 (1085)
+..+++.|++++++ |.|||++|||+. .+...+|++++|+ | ++...|..... ...+-.+++.+ |+.
T Consensus 489 ~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~~~~~~~~~~~~~~l~~~-~i~ 557 (590)
T PRK13409 489 RLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHASGPMDMREGMNRFLKEL-GIT 557 (590)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeecCCchhHHHHHHHHHHHc-CCE
Confidence 99999999999764 899999999986 4677899999996 4 67666654332 13345566666 554
No 37
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1e-56 Score=553.18 Aligned_cols=192 Identities=22% Similarity=0.286 Sum_probs=153.8
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCC-CCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGL 917 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~-~~~~~~ 917 (1085)
+++..+|+|+||+|++|+++||+|+||||||||+++|+|... +.+|+|.+ |.+. .+||++|+. .+++.+
T Consensus 329 ~~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~-------~i~y~~q~~~~l~~~~ 398 (635)
T PRK11147 329 IDGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL-------EVAYFDQHRAELDPEK 398 (635)
T ss_pred ECCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc-------EEEEEeCcccccCCCC
Confidence 345679999999999999999999999999999999999865 46899998 5321 489999975 577899
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
||.|++.+..... ... .....+.++++.+++.. ..+.. +..|||||||||+||++|+.+|++|||||||
T Consensus 399 tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGekqRl~la~al~~~p~lLlLDEPt 468 (635)
T PRK11147 399 TVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTP-----VKALSGGERNRLLLARLFLKPSNLLILDEPT 468 (635)
T ss_pred CHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhCh-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 9999998753211 001 11234667788887752 33443 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEe-cCcEEEEecCC
Q 001400 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-RGGELIYAGPL 1054 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~-~gG~~~~~g~~ 1054 (1085)
+|||+.+...+.++|+++ +.|||+||||++ .+...||++++|. +|....|.|+.
T Consensus 469 ~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g~y 523 (635)
T PRK11147 469 NDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVGGY 523 (635)
T ss_pred CCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccCCH
Confidence 999999999999999885 469999999986 4677899999997 55445566654
No 38
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-56 Score=510.73 Aligned_cols=454 Identities=24% Similarity=0.369 Sum_probs=347.1
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCC
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQV 221 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 221 (1085)
...++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.++|.+..-..+ ..-|+.|.|+..++
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 3467999999999999999999999999999999999999887 9999999998765443 25689999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
|+|||.|||.++....... -.+. ......+...+|+.+|+....++.||+
T Consensus 96 p~LsVaeNifLgre~~~~~---g~id---------------------------~~~m~~~A~~~l~~lg~~~~~~~~v~~ 145 (500)
T COG1129 96 PNLSVAENIFLGREPTRRF---GLID---------------------------RKAMRRRARELLARLGLDIDPDTLVGD 145 (500)
T ss_pred CCccHHHHhhcccccccCC---CccC---------------------------HHHHHHHHHHHHHHcCCCCChhhhhhh
Confidence 9999999997764432110 0000 011133477889999997557888775
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
||+||||-|.||||+..++++++||||||+|+...+..+++.++++.. .+..||.++|..+|++++||+|.||
T Consensus 146 -----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i~DritVl 218 (500)
T COG1129 146 -----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEIADRITVL 218 (500)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHhcCEEEEE
Confidence 999999999999999999999999999999999999999999999975 4677888999999999999999999
Q ss_pred cCCeEEEecCh-hhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhh
Q 001400 382 SEGQIVYQGPR-VSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEE 460 (1085)
Q Consensus 382 ~~G~iv~~G~~-~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1085)
.||+.+..++. .+. +.++..
T Consensus 219 RDG~~v~~~~~~~~~--------------------------------------------~~~~lv--------------- 239 (500)
T COG1129 219 RDGRVVGTRPTAAET--------------------------------------------SEDELV--------------- 239 (500)
T ss_pred eCCEEeeecccccCC--------------------------------------------CHHHHH---------------
Confidence 99999977652 111 000000
Q ss_pred hcCcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhH
Q 001400 461 LAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLY 540 (1085)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~ 540 (1085)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHH
Q 001400 541 LGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFS 620 (1085)
Q Consensus 541 ~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~ 620 (1085)
-.|+|-.
T Consensus 240 ------------------------------------------------------------------~~MvGr~------- 246 (500)
T COG1129 240 ------------------------------------------------------------------RLMVGRE------- 246 (500)
T ss_pred ------------------------------------------------------------------HHhhCcc-------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhc
Q 001400 621 RQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFL 700 (1085)
Q Consensus 621 ~~~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~ 700 (1085)
T Consensus 247 -------------------------------------------------------------------------------- 246 (500)
T COG1129 247 -------------------------------------------------------------------------------- 246 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhc
Q 001400 701 GHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRK 780 (1085)
Q Consensus 701 ~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1085)
.. ..+
T Consensus 247 ---~~------------------~~~------------------------------------------------------ 251 (500)
T COG1129 247 ---LE------------------DLF------------------------------------------------------ 251 (500)
T ss_pred ---hh------------------hhc------------------------------------------------------
Confidence 00 000
Q ss_pred CcchhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEE
Q 001400 781 GENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTAL 860 (1085)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al 860 (1085)
+. . . .+. ..+..+..++++ ....++||||++++||++||
T Consensus 252 -----------~~-~---~---~~~------~~~~~l~v~~l~-----------------~~~~~~dvSf~vr~GEIlGi 290 (500)
T COG1129 252 -----------PE-P---P---EEG------IGEPVLEVRNLS-----------------GGGKVRDVSFTVRAGEILGI 290 (500)
T ss_pred -----------cc-c---c---ccC------CCCcEEEEecCC-----------------CCCceeCceeEEeCCcEEEE
Confidence 00 0 0 000 001112222211 11146799999999999999
Q ss_pred EccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccC---CCCCCCCCHHHHHHHhhhhcCC-
Q 001400 861 VGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQN---DIHSPGLTVLESLLFSAWLRLP- 932 (1085)
Q Consensus 861 ~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~---~~~~~~~tv~e~l~~~~~~~~~- 932 (1085)
.|-=|||+|-|+++|.|... ...|+|.++|.+... ...+..++||+.+ ..+++.+++.+|+.+....+..
T Consensus 291 aGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~ 368 (500)
T COG1129 291 AGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSR 368 (500)
T ss_pred eccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhcc
Confidence 99999999999999999654 458999999997642 3456679999987 4578899999999877322211
Q ss_pred C-cccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 001400 933 S-EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTV 1011 (1085)
Q Consensus 933 ~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l 1011 (1085)
. -.+....++.+++..+.+++..-... ..+..||||++||+.|||.|..+|+||||||||.|+|.-++..|.++|
T Consensus 369 ~~~i~~~~e~~~~~~~~~~l~Ik~~s~~----~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li 444 (500)
T COG1129 369 RGLIDRRKERALAERYIRRLRIKTPSPE----QPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLI 444 (500)
T ss_pred ccccChHHHHHHHHHHHHhcCcccCCcc----chhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHH
Confidence 1 24455566778888888887532211 124579999999999999999999999999999999999999999999
Q ss_pred HHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 1012 RNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 1012 ~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
++++++|.+||++|-++. ++...||||+||+ +|+++..=+.+
T Consensus 445 ~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~-~Gri~~e~~~~ 486 (500)
T COG1129 445 RELAAEGKAILMISSELP-ELLGLSDRILVMR-EGRIVGELDRE 486 (500)
T ss_pred HHHHHCCCEEEEEeCChH-HHHhhCCEEEEEE-CCEEEEEeccc
Confidence 999999999999999986 7999999999998 47887654444
No 39
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5e-54 Score=505.51 Aligned_cols=219 Identities=26% Similarity=0.298 Sum_probs=172.0
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCH
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 226 (1085)
.+++|+|+|+.+.+|+.++|+|+|||||||||++|+|.+.|+ +|+|...+ .-+++|++|++...+..||
T Consensus 15 ~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv 83 (530)
T COG0488 15 DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTV 83 (530)
T ss_pred CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccH
Confidence 457999999999999999999999999999999999999876 99998764 2369999999998888999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCc---hHHHHHHH-hhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDE---DLDIFMKS-FALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---d~~~~~~~-~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
.+.+.-+.. ..++...+..... ...+++ ..+.+... ..++++..+.+++.+|..||++.. ++.++
T Consensus 84 ~~~v~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~-- 152 (530)
T COG0488 84 LDYVIEGFG-----ELRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS-- 152 (530)
T ss_pred HHHHHhhhH-----HHHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh--
Confidence 999976532 1112221111111 111111 11111111 235567788899999999999887 66665
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
.||||||.||+||++|+.+|++|+|||||++||..+..++-+.|++. .+ ++|.++|+.....+.|++|+-++
T Consensus 153 ---~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 153 ---SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred ---hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEec
Confidence 59999999999999999999999999999999999999999999853 34 56668999999999999999999
Q ss_pred CCeEE-EecChhhH
Q 001400 383 EGQIV-YQGPRVSV 395 (1085)
Q Consensus 383 ~G~iv-~~G~~~~~ 395 (1085)
.|++. |.|..+..
T Consensus 225 ~g~l~~y~Gny~~~ 238 (530)
T COG0488 225 RGKLTPYKGNYSSY 238 (530)
T ss_pred CCceeEecCCHHHH
Confidence 99875 66765544
No 40
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.8e-53 Score=521.77 Aligned_cols=185 Identities=22% Similarity=0.312 Sum_probs=146.1
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e 921 (1085)
..+|+|+||+|++|++++|+||||||||||+++|+|... +.+|+|.+++. ..+||++|++. +.+++.+
T Consensus 522 ~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~--------~~igyv~Q~~~--~~l~~~~ 589 (718)
T PLN03073 522 PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK--------VRMAVFSQHHV--DGLDLSS 589 (718)
T ss_pred CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--------eeEEEEecccc--ccCCcch
Confidence 469999999999999999999999999999999999866 46899998752 35899999752 3455666
Q ss_pred HHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCC
Q 001400 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1085)
Q Consensus 922 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD 1000 (1085)
+..+......+ ... .+.+.++++.+++.+ ..+.. +..|||||||||+|||+|+.+|++|||||||+|||
T Consensus 590 ~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqkqRvaLAraL~~~p~lLLLDEPT~~LD 659 (718)
T PLN03073 590 NPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLD 659 (718)
T ss_pred hHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 54322111111 111 234678899998863 33333 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEE-EecC
Q 001400 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGP 1053 (1085)
Q Consensus 1001 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~-~~g~ 1053 (1085)
+.+...+++.++++ +.|||++|||+. .+...||++++|.+ |+++ +.|+
T Consensus 660 ~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 660 LDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 99999999888774 349999999986 47778999999985 6776 6665
No 41
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.2e-51 Score=456.81 Aligned_cols=458 Identities=21% Similarity=0.321 Sum_probs=350.6
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCC----ceEEEEccCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQVA 222 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 222 (1085)
...+++|||+.|++||+.+|+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|. .-||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 567999999999999999999999999999999999999987 99999999987654442 46899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
++||.|||..+..-.. +.+.+ -.....+++++.+.+||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~-~~~~~------------------------------~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSK-GGLID------------------------------RRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCcccc-ccccC------------------------------HHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 9999999988653210 00000 011234588899999999988888875
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
||=||||||.|-++|+.+|++|+|||||+-|-+....++++.|++++.. +.+||.++|-..|+.+++|++.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~--G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAE--GKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeccHHHHHHhhCeeEEEe
Confidence 9999999999999999999999999999999999999999999999863 4566669999999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhhhhc
Q 001400 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1085)
.|+++-.-++ . ++ .+.+++++.
T Consensus 215 ~Gkvvgt~~~--~--------------~~---------------------------~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDP--V--------------AE---------------------------TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecC--C--------------CC---------------------------CCHHHHHHH---------------
Confidence 9998643220 0 00 000000000
Q ss_pred CcccccCCCcccccCCCCCCcHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccchhHHH
Q 001400 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1085)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~vf~~~~~~~~~~~~~~~~~g 542 (1085)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccHHHHHHH
Q 001400 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1085)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~g~~~~~~~f~~~ 622 (1085)
|+|-
T Consensus 237 ------------------------------------------------------------------MvG~---------- 240 (501)
T COG3845 237 ------------------------------------------------------------------MVGR---------- 240 (501)
T ss_pred ------------------------------------------------------------------hcCC----------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHhHcccCHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHhHhhcHHHHHHHHHHHhhhcCC
Q 001400 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1085)
Q Consensus 623 ~l~~~~~~~~~~~l~~~i~~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~a~~~nef~~~ 702 (1085)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T COG3845 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCcchHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCc
Q 001400 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1085)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1085)
++.. . .
T Consensus 241 ---------------~v~~-----------------------------------------------~----------~-- 246 (501)
T COG3845 241 ---------------EVVL-----------------------------------------------R----------V-- 246 (501)
T ss_pred ---------------cccc-----------------------------------------------c----------c--
Confidence 0000 0 0
Q ss_pred chhHHHHhhhhcccccCCcccccCCcccccccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEc
Q 001400 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1085)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G 862 (1085)
. .... ..| +..+..++++-.. ..+...+++|||+|++||++||.|
T Consensus 247 --------------~-~~~~--~pg------~~vL~V~~L~v~~------------~~~~~~v~~vs~~Vr~GEIvGIAG 291 (501)
T COG3845 247 --------------V-KPPS--TPG------EVVLEVEDLSVKD------------RRGVTAVKDVSFEVRAGEIVGIAG 291 (501)
T ss_pred --------------c-cCCC--CCC------CeEEEEeeeEeec------------CCCCceeeeeeeEEecCcEEEEEe
Confidence 0 0000 000 1122333332211 112467889999999999999999
Q ss_pred cCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC----Ch-hcccceEEEEccCC---CCCCCCCHHHHHHHhhhhcCC--
Q 001400 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK----RQ-ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRLP-- 932 (1085)
Q Consensus 863 ~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~----~~-~~~~~~~gy~~Q~~---~~~~~~tv~e~l~~~~~~~~~-- 932 (1085)
..|-|-+.|+.+|+|..+ +..|+|.++|.+. +. ...+..+||+|.+. .+.+.+|+.||+.+....+.|
T Consensus 292 V~GNGQ~eL~eaisGlr~--~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~ 369 (501)
T COG3845 292 VAGNGQSELVEAISGLRK--PASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFS 369 (501)
T ss_pred cCCCCHHHHHHHHhCCCc--cCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccc
Confidence 999999999999999875 3469999999985 22 23445689999985 456899999999876432211
Q ss_pred --CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH
Q 001400 933 --SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRT 1010 (1085)
Q Consensus 933 --~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~ 1010 (1085)
.-......+++..++++.++....... .....||||++||+-+||+|.++|++|++.+||-|||..+.+.|.+.
T Consensus 370 ~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~ 445 (501)
T COG3845 370 RGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHER 445 (501)
T ss_pred cccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHH
Confidence 123445667788889998887622111 12457999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 1011 VRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 1011 l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|.+.++.|++|+++|-+++ +++..+|||.||.+ |+++...+..+
T Consensus 446 l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 446 LLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred HHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceeccccccc
Confidence 9999999999999999998 79999999999985 78888777654
No 42
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-47 Score=380.73 Aligned_cols=214 Identities=27% Similarity=0.380 Sum_probs=188.6
Q ss_pred cccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCC----hhcccceEEE
Q 001400 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR----QETFARISGY 906 (1085)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~----~~~~~~~~gy 906 (1085)
+++++.+.+++..+|+|||++|++||+++|+|||||||||||+||.++.. +.+|+|.++|.++. ....|+.+|+
T Consensus 4 ~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGm 81 (240)
T COG1126 4 EIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGM 81 (240)
T ss_pred EEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCe
Confidence 45666777889999999999999999999999999999999999999877 56999999997543 2457889999
Q ss_pred EccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcC
Q 001400 907 CEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1085)
Q Consensus 907 ~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~ 986 (1085)
|+|+..+||.+||.||+.++...- ...+.++.++...+.|+.+||.+.++.+. .+|||||||||+|||||+.+
T Consensus 82 VFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGGQqQRVAIARALaM~ 154 (240)
T COG1126 82 VFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMD 154 (240)
T ss_pred ecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcHHHHHHHHHHHHcCC
Confidence 999999999999999999875322 23456667777889999999998888763 58999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 987 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+++++|||||+|||+....+.+.+++++++|.|.||+||++.+ ..+.+||+++|+ +|+++..|+..
T Consensus 155 P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd-~G~iie~g~p~ 221 (240)
T COG1126 155 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMD-QGKIIEEGPPE 221 (240)
T ss_pred CCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEee-CCEEEEecCHH
Confidence 99999999999999999999999999999999999999999875 678899999998 57888888654
No 43
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=6.4e-45 Score=406.69 Aligned_cols=204 Identities=21% Similarity=0.287 Sum_probs=154.9
Q ss_pred cceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCc
Q 001400 814 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 893 (1085)
Q Consensus 814 ~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 893 (1085)
|..+.++|+.+.++ ++..++++++|.|.+++.+|+|||||+||||||+++.|... +..|.+.-.-+
T Consensus 387 ~pvi~~~nv~F~y~------------~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYS------------DNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCC------------CcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc
Confidence 34556666665442 22368889999999999999999999999999999999766 45777654332
Q ss_pred cCChhcccceEEEEccC--CCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001400 894 PKRQETFARISGYCEQN--DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLST 971 (1085)
Q Consensus 894 ~~~~~~~~~~~gy~~Q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~ 971 (1085)
. ++++..|+ +.+.-..++.|+++=. .+ + ..+.+.+..++..+||....... ..++||+
T Consensus 453 ~--------~~~~y~Qh~~e~ldl~~s~le~~~~~----~~-~---~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~ 512 (614)
T KOG0927|consen 453 N--------KLPRYNQHLAEQLDLDKSSLEFMMPK----FP-D---EKELEEMRSILGRFGLTGDAQVV----PMSQLSD 512 (614)
T ss_pred c--------cchhhhhhhHhhcCcchhHHHHHHHh----cc-c---cchHHHHHHHHHHhCCCcccccc----chhhccc
Confidence 1 23344443 2233355677766421 11 1 23345577888888988544332 2468999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEe
Q 001400 972 EQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1085)
Q Consensus 972 Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~ 1051 (1085)
|||+||.+|+.++..|.||+|||||+|||..+...+.++|.++ ..+||++|||..+ +-..++++.+..+++...+.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecC
Confidence 9999999999999999999999999999999999999999885 5699999999874 77889999999999999999
Q ss_pred cCCC
Q 001400 1052 GPLG 1055 (1085)
Q Consensus 1052 g~~~ 1055 (1085)
|...
T Consensus 589 G~i~ 592 (614)
T KOG0927|consen 589 GDIE 592 (614)
T ss_pred ccHH
Confidence 8764
No 44
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.4e-45 Score=441.14 Aligned_cols=248 Identities=44% Similarity=0.779 Sum_probs=227.6
Q ss_pred ccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC-eeeeEEEEc
Q 001400 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYIS 891 (1085)
Q Consensus 813 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~ 891 (1085)
.+..+.|+++++....+.. ..+++|+|||++++|||++|||||+||||||||++|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3556778888776643211 3578999999999999999999999999999999999988753 689999999
Q ss_pred CccCChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001400 892 GYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLST 971 (1085)
Q Consensus 892 g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~ 971 (1085)
|++.....+++.+|||.|+|.+.|.+||+|++.|+|.+|.|.....++++++++++++.++|.+++|.++|.++.+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999888889999999999999999999999999888889999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEe
Q 001400 972 EQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1085)
Q Consensus 972 Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~ 1051 (1085)
||||||+||.+|+.+|+||||||||||||+.++..++++|++++++|+|||||+|||+.++++.||++++|.+ |+++|.
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 599999
Q ss_pred cCCCCchHHHHHHHHhccccccCC
Q 001400 1052 GPLGSKSCELIKYFEVESFMFKSP 1075 (1085)
Q Consensus 1052 g~~~~~~~~~~~~~~~~~g~~~~~ 1075 (1085)
|+. .++.+||+.. |-| ||
T Consensus 253 G~~----~~~~~ff~~~-G~~-~P 270 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GFP-CP 270 (613)
T ss_pred cCH----HHHHHHHHhC-CCC-CC
Confidence 995 5899999987 777 44
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-44 Score=360.81 Aligned_cols=221 Identities=27% Similarity=0.381 Sum_probs=187.9
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC----CCCceEEEEccCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF----VPPRTSAYVSQQDWQVA 222 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~----~~~~~~~yv~Q~d~~~~ 222 (1085)
+..+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..++.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 457999999999999999999999999999999999998776 99999999765322 24678999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
++||-||+..+...-. .....+.+....++|+.+||.+.+|.+
T Consensus 91 HlTvleNv~lap~~v~---------------------------------~~~k~eA~~~A~~lL~~VGL~~ka~~y---- 133 (240)
T COG1126 91 HLTVLENVTLAPVKVK---------------------------------KLSKAEAREKALELLEKVGLADKADAY---- 133 (240)
T ss_pred cchHHHHHHhhhHHHc---------------------------------CCCHHHHHHHHHHHHHHcCchhhhhhC----
Confidence 9999999988643210 011112234577889999999998865
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
+.+|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++. +.|++.++|....+.+.+|||+.|+
T Consensus 134 -P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~VadrviFmd 210 (240)
T COG1126 134 -PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFAREVADRVIFMD 210 (240)
T ss_pred -ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHHhhheEEEee
Confidence 4579999999999999999999999999999999999999999999999974 5666668899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHh
Q 001400 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQE 418 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~ 418 (1085)
+|+++.+|+++++ |..|.+....+|+..
T Consensus 211 ~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 211 QGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred CCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999998876 456776667777754
No 46
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=374.94 Aligned_cols=204 Identities=25% Similarity=0.364 Sum_probs=183.4
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~~~ 914 (1085)
...+|+|||++|++||++||+|+||||||||++++.++.. |.+|+|.++|.++.. ..+|+.||++||+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 4679999999999999999999999999999999999877 579999999976532 35788899999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
...||.||+.|...+.. .++++.++++.++++.+||.+.++.+. .+|||||||||+|||||+.+|+||+.||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999876653 456778889999999999998877653 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|||+|||++.+.|.+.|+++.++ |.||++|||+++. +-+.|||+.+|+ .|+++..|++.+
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~V-vk~ic~rVavm~-~G~lvE~G~v~~ 228 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEMEV-VKRICDRVAVLD-QGRLVEEGTVSE 228 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHhhhheEee-CCEEEEeccHHH
Confidence 99999999999999999999765 9999999999874 778899999998 579999998765
No 47
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.6e-43 Score=374.49 Aligned_cols=226 Identities=26% Similarity=0.390 Sum_probs=192.4
Q ss_pred ccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEc
Q 001400 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCE 908 (1085)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~ 908 (1085)
+++++..|+++.+|+|+||++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+++.+||+|
T Consensus 5 ~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i~~~~~kelAk~ia~vp 82 (258)
T COG1120 5 VENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDIASLSPKELAKKLAYVP 82 (258)
T ss_pred EEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCchhhcCHHHHhhhEEEec
Confidence 3444555678899999999999999999999999999999999999776 568999999998653 56889999999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 909 QNDIHSPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 909 Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
|.+...+.+||+|-+.++..-+.. .....+++.+.++++++.+++.++++..+ ..||||||||+.|||||+++|
T Consensus 83 Q~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGGerQrv~iArALaQ~~ 157 (258)
T COG1120 83 QSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGGERQRVLIARALAQET 157 (258)
T ss_pred cCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChhHHHHHHHHHHHhcCC
Confidence 999888899999999988432211 11224455567999999999999998865 589999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC--chHHHHHH
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS--KSCELIKY 1064 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~--~~~~~~~~ 1064 (1085)
+||+||||||+||...+..++++++++.+ +|.|||++.||++. ...+||++++|++ |++++.|+..+ ..+.+-+.
T Consensus 158 ~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a~G~p~evlT~e~l~~V 235 (258)
T COG1120 158 PILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVAQGTPEEVLTEENLREV 235 (258)
T ss_pred CEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEeecCcchhcCHHHHHHH
Confidence 99999999999999999999999999984 59999999999985 7889999999985 79999998765 24455556
Q ss_pred HH
Q 001400 1065 FE 1066 (1085)
Q Consensus 1065 ~~ 1066 (1085)
|.
T Consensus 236 yg 237 (258)
T COG1120 236 YG 237 (258)
T ss_pred hC
Confidence 63
No 48
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-43 Score=368.61 Aligned_cols=221 Identities=27% Similarity=0.403 Sum_probs=184.2
Q ss_pred ccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCC--C
Q 001400 836 GVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI--H 913 (1085)
Q Consensus 836 ~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~--~ 913 (1085)
++.|++.++|+||||+|++|++++|+||||||||||+|+|.|..+ +.+|+|.+.|.+.....-+.++|||||... .
T Consensus 11 ~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~ 88 (254)
T COG1121 11 TVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPVRKRRKRLRIGYVPQKSSVDR 88 (254)
T ss_pred EEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccccccccCCeEEEcCcccccCC
Confidence 333454469999999999999999999999999999999999766 568999999998765544678999999642 2
Q ss_pred CCCCCHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 914 SPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
...+||+|-+..+.+.+.. .....+.+++.++++|+.+|+.++++..++ +|||||+||+.|||||+++|++|+|
T Consensus 89 ~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGGQ~QRV~lARAL~~~p~lllL 163 (254)
T COG1121 89 SFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGGQKQRVLLARALAQNPDLLLL 163 (254)
T ss_pred CCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcHHHHHHHHHHHhccCCCEEEe
Confidence 3457999999887443321 111233446789999999999999998764 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc--hHHHHHHHH
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK--SCELIKYFE 1066 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~--~~~~~~~~~ 1066 (1085)
||||+|+|+.++..++++|++++++|+||++|+||++ .+.+.||+++.|+ +++++.|+..+. .+++..-|.
T Consensus 164 DEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G~~~~~~~~~~l~~~~g 236 (254)
T COG1121 164 DEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASGPPEEVLTEENLEKAFG 236 (254)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEeccChhhccCHHHHHHHhC
Confidence 9999999999999999999999988999999999998 5889999999997 479999998763 234555454
No 49
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.5e-43 Score=358.28 Aligned_cols=232 Identities=25% Similarity=0.333 Sum_probs=198.5
Q ss_pred ccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccce
Q 001400 830 VELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARI 903 (1085)
Q Consensus 830 ~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~ 903 (1085)
++++++.+.++++.+++|||++|++||+++|||+||+||||||++|.|... +.+|+|.++|.++.+ ...+++
T Consensus 9 I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i~~ls~~~~~~ir~r 86 (263)
T COG1127 9 IEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDIPQLSEEELYEIRKR 86 (263)
T ss_pred EEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcchhccCHHHHHHHHhh
Confidence 345555666789999999999999999999999999999999999999877 569999999998642 246788
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHH
Q 001400 904 SGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVE 982 (1085)
Q Consensus 904 ~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~a 982 (1085)
+|+++|+-.+|..+||+||+.|.. |.....+....++.+..-++++||... .+.. +.+||||++||++||||
T Consensus 87 ~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsELSGGM~KRvaLARA 159 (263)
T COG1127 87 MGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSELSGGMRKRVALARA 159 (263)
T ss_pred eeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chhhcchHHHHHHHHHH
Confidence 999999999999999999999864 333445566667778888888998876 4443 36899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC----c
Q 001400 983 LVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS----K 1057 (1085)
Q Consensus 983 L~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~----~ 1057 (1085)
++.+|+|||+||||+||||.+...+-++|+++.++ |.|++++|||.+ .++..||++++|.+ |+++..|+..+ +
T Consensus 160 ialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gkv~~~Gt~~el~~sd 237 (263)
T COG1127 160 IALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GKVIAEGTPEELLASD 237 (263)
T ss_pred HhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CEEEEeCCHHHHHhCC
Confidence 99999999999999999999999999999999876 999999999997 58899999999985 79999999865 2
Q ss_pred hHHHHHHHHhccccc
Q 001400 1058 SCELIKYFEVESFMF 1072 (1085)
Q Consensus 1058 ~~~~~~~~~~~~g~~ 1072 (1085)
..-+-+||.+..+=|
T Consensus 238 ~P~v~qf~~G~~~gp 252 (263)
T COG1127 238 DPWVRQFFNGIRDGP 252 (263)
T ss_pred CHHHHHHhcCCCCCc
Confidence 335778888775544
No 50
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=355.73 Aligned_cols=210 Identities=26% Similarity=0.369 Sum_probs=184.9
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 223 (1085)
++.+++|+|++|++||+++++|||||||||+||+|.+++.|+ +|+|.+||.++.+.. .+|.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 457999999999999999999999999999999999999887 999999999987754 47899999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||.|||.+-..+.+-. .++.+.+++++|+.+||+.. ...+++
T Consensus 90 ~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 99999998866554321 12234569999999999752 122456
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
+..|||||+|||.+||||+.+|+|++||||+++||+-++.++.+.++++.+..++| |+.++|+.+|++.++|||++|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kT-ivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKT-IVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCE-EEEEecCHHHHHhhhceEEEecC
Confidence 77899999999999999999999999999999999999999999999998887655 55588999999999999999999
Q ss_pred CeEEEecChhhHHH
Q 001400 384 GQIVYQGPRVSVLD 397 (1085)
Q Consensus 384 G~iv~~G~~~~~~~ 397 (1085)
|+++..+++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999874
No 51
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-42 Score=365.85 Aligned_cols=224 Identities=26% Similarity=0.374 Sum_probs=194.5
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCC
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDW 219 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~ 219 (1085)
....+|+|||+.|++|++++|+|+||||||||++++.++-.|+ +|+|.++|.++.... .++.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999988876 999999998876653 3578999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1085)
++...||.||++|..+..+..+ .+.+.++.++|+.+||++.+|..
T Consensus 94 LLssrTV~~NvA~PLeiag~~k----------------------------------~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVPK----------------------------------AEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhccC-
Confidence 9999999999999887765221 12245699999999999888755
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
+.+|||||||||+|||||+.+|+||++|||||+|||.|+..|.+.|+++.+++| .||+.++|-++-+-.+||||.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lg-lTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELG-LTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHhhhhe
Confidence 457999999999999999999999999999999999999999999999998775 556668899999999999999
Q ss_pred EecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhhc
Q 001400 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVT 420 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~ 420 (1085)
+|++|+++++|+..++ |..|.+.-..+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999887 44566655666666544
No 52
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-42 Score=360.06 Aligned_cols=201 Identities=25% Similarity=0.378 Sum_probs=176.4
Q ss_pred cccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCC
Q 001400 835 EGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS 914 (1085)
Q Consensus 835 ~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~ 914 (1085)
.++.++...+|+|||++|.+||+++|+|||||||||||++|+|..+ +.+|+|.++|.++. .....+|||+|++.++
T Consensus 9 v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v~--~p~~~~~~vFQ~~~Ll 84 (248)
T COG1116 9 VSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPVT--GPGPDIGYVFQEDALL 84 (248)
T ss_pred eEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCcccC--CCCCCEEEEeccCccc
Confidence 3344566889999999999999999999999999999999999887 56899999998863 2355689999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
|-+||+||+.|+...+. ....+..+.++++++.+||.+..++.. .+|||||||||+|||||+.+|+||+|||
T Consensus 85 PW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQRVaiARAL~~~P~lLLlDE 156 (248)
T COG1116 85 PWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQRVAIARALATRPKLLLLDE 156 (248)
T ss_pred chhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999999999876543 344556668999999999999988763 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecC-cEE
Q 001400 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG-GEL 1048 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~g-G~~ 1048 (1085)
|+++||+.++..+++.+.++.+ .++|||+||||.+ +....+|||++|.++ |++
T Consensus 157 PFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 157 PFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred CcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCCCcce
Confidence 9999999999999999999975 5899999999997 677788999999875 444
No 53
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=355.11 Aligned_cols=213 Identities=25% Similarity=0.343 Sum_probs=187.5
Q ss_pred ccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEc
Q 001400 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCE 908 (1085)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~ 908 (1085)
+++.++.|+++.+++|+|++|++||+++++|||||||||+|++|.++.. +.+|+|+|+|.++.. ...||.+|||-
T Consensus 4 ~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~~~d~~~LRr~IGYvi 81 (309)
T COG1125 4 FENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDISDLDPVELRRKIGYVI 81 (309)
T ss_pred eeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecccCCHHHHHHhhhhhh
Confidence 3444556678899999999999999999999999999999999999877 579999999998764 46789999999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCCCHHHHHHHHHHHHHhcC
Q 001400 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS--LSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1085)
Q Consensus 909 Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~ 986 (1085)
|.-.+||++||.||+.+-..+. .++.+..+++++|+|++++|.+ +.+.+ +.+|||||+||+.+||||+++
T Consensus 82 QqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAad 153 (309)
T COG1125 82 QQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAAD 153 (309)
T ss_pred hhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcC
Confidence 9999999999999998765543 4566777888999999999975 55554 368999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 987 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|+||+||||+++|||-++..+++.++++.++ |+|||++|||++ +.++.+||+.+|+ +|+++..++..+
T Consensus 154 P~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q~~~P~~ 222 (309)
T COG1125 154 PPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQYDTPDE 222 (309)
T ss_pred CCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEEeCCHHH
Confidence 9999999999999999999999999999765 999999999997 6889999999998 578887776543
No 54
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.1e-41 Score=417.58 Aligned_cols=252 Identities=35% Similarity=0.573 Sum_probs=216.2
Q ss_pred cceeeeccceeeeeccc----------------cccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhC
Q 001400 814 PLSMAFGNINYFVDVPV----------------ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAG 877 (1085)
Q Consensus 814 ~~~~~~~~~~y~v~~~~----------------~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g 877 (1085)
+.++.|.++.|.+.... ..++..+.++++.+|+|||+++++||++||+||||||||||+++|+|
T Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG 116 (659)
T PLN03211 37 PITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAG 116 (659)
T ss_pred ceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhC
Confidence 67888999999886542 12233445667889999999999999999999999999999999999
Q ss_pred CCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc
Q 001400 878 RKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS 957 (1085)
Q Consensus 878 ~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 957 (1085)
+..++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|.+.++.+.....++..+.++++++.++|.+..
T Consensus 117 ~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 195 (659)
T PLN03211 117 RIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCE 195 (659)
T ss_pred CCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhc
Confidence 866434689999999876533 3456899999999999999999999988776554444455567789999999999988
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcC
Q 001400 958 GALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFD 1037 (1085)
Q Consensus 958 ~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 1037 (1085)
+..++....++||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.||
T Consensus 196 ~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D 275 (659)
T PLN03211 196 NTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFD 275 (659)
T ss_pred CceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Confidence 88777655678999999999999999999999999999999999999999999999988899999999999866889999
Q ss_pred EEEEEecCcEEEEecCCCCchHHHHHHHHhccccc
Q 001400 1038 ELLFMKRGGELIYAGPLGSKSCELIKYFEVESFMF 1072 (1085)
Q Consensus 1038 ~il~l~~gG~~~~~g~~~~~~~~~~~~~~~~~g~~ 1072 (1085)
++++|+ +|++++.|+. +++++||+++ |.+
T Consensus 276 ~iilL~-~G~iv~~G~~----~~~~~~f~~~-G~~ 304 (659)
T PLN03211 276 SVLVLS-EGRCLFFGKG----SDAMAYFESV-GFS 304 (659)
T ss_pred eEEEec-CCcEEEECCH----HHHHHHHHHC-CCC
Confidence 999998 4799999985 5899999998 655
No 55
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=353.82 Aligned_cols=219 Identities=27% Similarity=0.377 Sum_probs=185.8
Q ss_pred ccccccccc-CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccce
Q 001400 831 ELKQEGVLE-DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARI 903 (1085)
Q Consensus 831 ~~~~~~~~~-~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~ 903 (1085)
+++++.+.| +++++|+|||++|++||++||+|+|||||||||++|.|... +.+|+|.++|.++.. ..+++.
T Consensus 5 ~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i~~~~~k~lr~~r~~ 82 (258)
T COG3638 5 EVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQITKLKGKELRKLRRD 82 (258)
T ss_pred EEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccchhccchHHHHHHHHh
Confidence 344445555 67899999999999999999999999999999999999765 568999999976432 356788
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhhhhcCC-----CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHH
Q 001400 904 SGYCEQNDIHSPGLTVLESLLFSAWLRLP-----SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLT 978 (1085)
Q Consensus 904 ~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~ 978 (1085)
+||++|++.+.+.++|.+|++.+..-+.+ .....++.+..+-++++.+|+.+.+-... +.|||||+|||+
T Consensus 83 iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra-----~~LSGGQQQRVa 157 (258)
T COG3638 83 IGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA-----STLSGGQQQRVA 157 (258)
T ss_pred ceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh-----ccCCcchhHHHH
Confidence 99999999999999999999877432211 23344566677788999999987766554 479999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc
Q 001400 979 IAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1085)
Q Consensus 979 iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~ 1057 (1085)
|||||+++|+||+.|||+++|||.+++.||+.|+++.+ .|.|||+..|+.++ ..++|||++-|++ |+++|+||..+.
T Consensus 158 IARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~~-G~ivfDg~~~el 235 (258)
T COG3638 158 IARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLKA-GRIVFDGPASEL 235 (258)
T ss_pred HHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEecC-CcEEEeCChhhh
Confidence 99999999999999999999999999999999999975 59999999999875 6788999999985 799999998764
Q ss_pred h
Q 001400 1058 S 1058 (1085)
Q Consensus 1058 ~ 1058 (1085)
.
T Consensus 236 ~ 236 (258)
T COG3638 236 T 236 (258)
T ss_pred h
Confidence 3
No 56
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-41 Score=379.11 Aligned_cols=219 Identities=32% Similarity=0.441 Sum_probs=189.2
Q ss_pred cccccccC-CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEcc
Q 001400 833 KQEGVLED-RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQ 909 (1085)
Q Consensus 833 ~~~~~~~~-~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q 909 (1085)
+++.+.++ ++.+|+||||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|
T Consensus 8 ~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~~~~~~~~~~igy~~~ 85 (293)
T COG1131 8 RNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVVKEPAKVRRRIGYVPQ 85 (293)
T ss_pred cceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCccCHHHHHhheEEEcc
Confidence 34455567 5899999999999999999999999999999999999877 468999999987654 467788999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 910 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
++.+++.+||+|++.|.+.++.+.. ....+.++++++.++|.+..+..+ ++||+||||||.||+||+++|++
T Consensus 86 ~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~kqrl~ia~aL~~~P~l 157 (293)
T COG1131 86 EPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKV-----RTLSGGMKQRLSIALALLHDPEL 157 (293)
T ss_pred CCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998886532 344567899999999998554433 57999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHCC-ceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCchHHHHHHHHh
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTG-RTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEV 1067 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~~~~~~~~~~~ 1067 (1085)
|||||||+||||.++..+++.|++++++| +||+++||.++ ++...||++++|++ |++++.|+.. ++.+.+..
T Consensus 158 liLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~~~----~l~~~~~~ 230 (293)
T COG1131 158 LILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGTPE----ELKEKFGG 230 (293)
T ss_pred EEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCCHH----HHHHhhcc
Confidence 99999999999999999999999999887 89999999997 67788999999985 7999999653 35555443
No 57
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-42 Score=362.42 Aligned_cols=214 Identities=29% Similarity=0.412 Sum_probs=189.3
Q ss_pred cccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCc---cCCh-hcccceEEEEc
Q 001400 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY---PKRQ-ETFARISGYCE 908 (1085)
Q Consensus 833 ~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gy~~ 908 (1085)
.+..+..+...+++|||++|+.||++||+|||||||||||++|+|+.+ +..|.|.++|. +... ....|++||++
T Consensus 6 ~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvF 83 (345)
T COG1118 6 NNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVF 83 (345)
T ss_pred hhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEE
Confidence 333445567789999999999999999999999999999999999987 56999999998 5444 34568899999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 001400 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1085)
Q Consensus 909 Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ 988 (1085)
|+..+|+.+||.+|+.|+...+ ....+..+.+.++++++++++|.++.+.+. .+||||||||+++||||+.+|+
T Consensus 84 Q~YALF~HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----~QLSGGQrQRVALARALA~eP~ 157 (345)
T COG1118 84 QHYALFPHMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYP-----AQLSGGQRQRVALARALAVEPK 157 (345)
T ss_pred echhhcccchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCc-----hhcChHHHHHHHHHHHhhcCCC
Confidence 9999999999999999998766 233455677888999999999999988763 5899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 989 illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
+|+||||+++||+.-+..+.+.|+++.++ |.|+|+||||++ +..+.+||+++|++ |+|+..|+..+
T Consensus 158 vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~e 224 (345)
T COG1118 158 VLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPDE 224 (345)
T ss_pred eEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHHH
Confidence 99999999999999999999999999876 999999999987 79999999999985 78998888653
No 58
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-42 Score=378.79 Aligned_cols=217 Identities=29% Similarity=0.419 Sum_probs=193.5
Q ss_pred ecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCHHH
Q 001400 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVRE 228 (1085)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 228 (1085)
+|+|+|+.|++||+++|+|||||||||||++|||+..++ +|+|.++|.++++..| +|.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 999999999999999999999999999999999999887 9999999999998776 489999999999999999999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCc
Q 001400 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1085)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1085)
||.|+.+.++... .+.+.+++++.+.|+|++..|.. +++||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~-----P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRK-----PLQLS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 9999988764321 11245699999999999988865 45799
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEE
Q 001400 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1085)
Q Consensus 309 GGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~ 388 (1085)
|||||||++||||+.+|++++||||+|.||+..+.++...++++.+.++ +++|.++|+..|+..++|+|++|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~-~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLG-TTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcC-CcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999999877664 556668999999999999999999999999
Q ss_pred ecChhhHHHHHHhCCCCCCCCCChhHHHH
Q 001400 389 QGPRVSVLDFFASMGFSCPKRKNVADFLQ 417 (1085)
Q Consensus 389 ~G~~~~~~~~f~~~G~~~p~~~~~adfl~ 417 (1085)
.|++.++ |..|.+.-+|.|+-
T Consensus 215 ~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred cCChHHH--------hhCccchhhhhhcC
Confidence 9999998 44677766777753
No 59
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-42 Score=379.39 Aligned_cols=223 Identities=31% Similarity=0.435 Sum_probs=196.9
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 225 (1085)
+..+|+|+|+.|++||+++|+|||||||||||++|||+..|+ +|+|.++|.++....+ +|.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 467999999999999999999999999999999999999887 9999999999988766 588999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.|+.+.+.... + .+.+.+++++|+.++|++.++.. +.
T Consensus 94 V~~NVafGLk~~~~~~-------------------~--------------~~i~~rv~e~L~lV~L~~~~~R~-----p~ 135 (352)
T COG3842 94 VEENVAFGLKVRKKLK-------------------K--------------AEIKARVEEALELVGLEGFADRK-----PH 135 (352)
T ss_pred HHHHhhhhhhhcCCCC-------------------H--------------HHHHHHHHHHHHHcCchhhhhhC-----hh
Confidence 9999999987432111 0 11234699999999999977754 45
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
+|||||+|||+|||||+.+|++|+||||.|+||..-+.++...|+++.+.. +.+.|.++|+..|++.++|||++|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCc
Confidence 799999999999999999999999999999999999999999999999887 4556668999999999999999999999
Q ss_pred EEEecChhhHHHHHHhCCCCCCCCCChhHHHHhh
Q 001400 386 IVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEV 419 (1085)
Q Consensus 386 iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v 419 (1085)
|...|+++++ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 4578777888887653
No 60
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-42 Score=360.02 Aligned_cols=222 Identities=31% Similarity=0.448 Sum_probs=188.6
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCc---cCCCCC-CCceEEEEccCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGH---GFKEFV-PPRTSAYVSQQDWQVA 222 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~---~~~~~~-~~~~~~yv~Q~d~~~~ 222 (1085)
...+++|||+.|+.||+++|+|||||||||||++|||+..|+ +|.|.+||. +.+... ..|.+|||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 456899999999999999999999999999999999999887 999999999 555533 3489999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
+|||.+||.|+.+++... |+ ..+.+.+++++|+.+.|++.++ +
T Consensus 91 HmtVa~NIAFGl~~~~~~-------------------p~-------------~~~~r~rv~elL~lvqL~~la~-----r 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKER-------------------PS-------------EAEIRARVEELLRLVQLEGLAD-----R 133 (345)
T ss_pred cchHHhhhhhcccccccC-------------------CC-------------hhhHHHHHHHHHHHhcccchhh-----c
Confidence 999999999998765110 00 1122446889999999988766 4
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
++.+|||||||||++||||+..|++|+||||+++||...+..+-+.|+++....+.|++ .++|+..|++++||+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttv-fVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTV-FVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEE-EEeCCHHHHHhhcceEEEec
Confidence 56789999999999999999999999999999999999999999999999876655555 58899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHH
Q 001400 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQ 417 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~ 417 (1085)
+|+|...||+.++- ..|...-++.|+-
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G 239 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLG 239 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceecccc
Confidence 99999999999984 3455444555543
No 61
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.9e-41 Score=353.35 Aligned_cols=193 Identities=30% Similarity=0.450 Sum_probs=166.3
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------h-cccceEEEEccCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------E-TFARISGYCEQNDIHS 914 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~-~~~~~~gy~~Q~~~~~ 914 (1085)
..+|++|||+|++||++||||||||||||||++|.|... +.+|.+.++|.++.. . -+++.+||++|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~--pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDK--PTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 689999999999999999999999999999999999877 468999999977542 1 2355799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccc-cccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSG-ALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
|.+||+||+.+...+... ........++++++.+++.+..+ .. +.+|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999986544422 11245566788999999986655 33 3589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCc
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGG 1046 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG 1046 (1085)
|||.+||.++.+.|+++++++.++ |+|||++|||+ .+...|||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999765 99999999997 4778999999999754
No 62
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.1e-41 Score=375.39 Aligned_cols=212 Identities=32% Similarity=0.473 Sum_probs=185.3
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC--CCCceEEEEccCCCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 224 (1085)
++.+|+|||+.|++|++++|+||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 467999999999999999999999999999999999999886 99999999887552 3457899999999999999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||+|||.|.+++.+.... ....+++++++.+||++..++ .+
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~-----~~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANK-----KV 134 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCc-----ch
Confidence 999999999888754310 012358899999999985444 44
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
++||+||||||+||.||+++|++|||||||+|||+.++.++++.|+++++. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 679999999999999999999999999999999999999999999999875 4366666889999999999999999999
Q ss_pred eEEEecChhhHHHHHHh
Q 001400 385 QIVYQGPRVSVLDFFAS 401 (1085)
Q Consensus 385 ~iv~~G~~~~~~~~f~~ 401 (1085)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999887765543
No 63
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=340.23 Aligned_cols=214 Identities=25% Similarity=0.339 Sum_probs=181.9
Q ss_pred ccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCC---CCCeeeeEEEEcCccCCh-----hcccceEE
Q 001400 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGIIEGDIYISGYPKRQ-----ETFARISG 905 (1085)
Q Consensus 834 ~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~---~~~~~~G~i~i~g~~~~~-----~~~~~~~g 905 (1085)
++.+.|+.+++|+|||+.|++++++||+|||||||||||+++.+.. ++-..+|+|.++|.++.. ...|+.+|
T Consensus 12 ~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vG 91 (253)
T COG1117 12 DLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVG 91 (253)
T ss_pred ceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHhe
Confidence 3334457889999999999999999999999999999999999843 344678999999987643 45789999
Q ss_pred EEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHh
Q 001400 906 YCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELV 984 (1085)
Q Consensus 906 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~aL~ 984 (1085)
+|+|.|.-|| +|++||+.|+..+....+ ++.++.+++.++...|++- .|.+. .. ..+|||||+|||||||||+
T Consensus 92 MVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~-~s-a~~LSGGQQQRLcIARalA 165 (253)
T COG1117 92 MVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLH-KS-ALGLSGGQQQRLCIARALA 165 (253)
T ss_pred eeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhh-CC-ccCCChhHHHHHHHHHHHh
Confidence 9999999998 899999999987664433 5667889999999888754 33332 22 2469999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 985 ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 985 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
.+|+||+||||||+|||.+...|.++|.+++ +.-|||++||.+. ...+..|+..++.. |++++.|+..+
T Consensus 166 v~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~LvE~g~T~~ 234 (253)
T COG1117 166 VKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GELVEFGPTDK 234 (253)
T ss_pred cCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cEEEEEcCHHh
Confidence 9999999999999999999999999999996 5799999999986 57788999999985 69999998764
No 64
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3e-41 Score=358.76 Aligned_cols=211 Identities=32% Similarity=0.443 Sum_probs=180.8
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 223 (1085)
++.||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+... .|.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 357999999999999999999999999999999999999887 9999999999877653 4789999999887888
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+|.+.++..-... .+ . ....+....+++.|+.+|+.+.++..+.
T Consensus 91 ~tV~d~V~~GR~p~~~--~~----------------~------------~~~~~D~~~v~~aL~~~~~~~la~r~~~--- 137 (258)
T COG1120 91 LTVYELVLLGRYPHLG--LF----------------G------------RPSKEDEEIVEEALELLGLEHLADRPVD--- 137 (258)
T ss_pred cEEeehHhhcCCcccc--cc----------------c------------CCCHhHHHHHHHHHHHhCcHHHhcCccc---
Confidence 9999999887432100 00 0 0001112358899999999999987764
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
.|||||||||.|||||+++|++|+||||||+||...+.++++.++++++.. +.++|+++|+...+..+||++++|++
T Consensus 138 --~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk~ 214 (258)
T COG1120 138 --ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLKD 214 (258)
T ss_pred --ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 599999999999999999999999999999999999999999999999764 45566678999999999999999999
Q ss_pred CeEEEecChhhHH
Q 001400 384 GQIVYQGPRVSVL 396 (1085)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1085)
|+++++|++++++
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999998875
No 65
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.3e-41 Score=352.91 Aligned_cols=206 Identities=28% Similarity=0.437 Sum_probs=175.8
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccC---CCCCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQ---DWQVAEMT 225 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~---d~~~~~lT 225 (1085)
++|+|||+.+++|++++|+||||||||||+|+|.|++.|. +|+|.++|.+......+..+|||||. |+-|| +|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-IT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cC
Confidence 4999999999999999999999999999999999999887 99999999988776667789999994 56566 69
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+|.+..+..-+. ..... . ..+....++++|+.+||.+.+|..+|+
T Consensus 94 V~d~V~~g~~~~~--g~~~~---~-------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~~---- 139 (254)
T COG1121 94 VKDVVLLGRYGKK--GWFRR---L-------------------------NKKDKEKVDEALERVGMEDLRDRQIGE---- 139 (254)
T ss_pred HHHHHHccCcccc--ccccc---c-------------------------cHHHHHHHHHHHHHcCchhhhCCcccc----
Confidence 9999987632110 00000 0 011134599999999999999988875
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.++ +.+|++++|+...+.++||+|+.|+ ++
T Consensus 140 -LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln-~~ 215 (254)
T COG1121 140 -LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLN-RH 215 (254)
T ss_pred -cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEc-Ce
Confidence 9999999999999999999999999999999999999999999999876 4556668999999999999999995 67
Q ss_pred EEEecChhhHH
Q 001400 386 IVYQGPRVSVL 396 (1085)
Q Consensus 386 iv~~G~~~~~~ 396 (1085)
+++.|+++++.
T Consensus 216 ~~~~G~~~~~~ 226 (254)
T COG1121 216 LIASGPPEEVL 226 (254)
T ss_pred eEeccChhhcc
Confidence 89999998875
No 66
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=336.01 Aligned_cols=207 Identities=27% Similarity=0.373 Sum_probs=184.8
Q ss_pred ccCCe-EEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCC--hhcccceEEEEccCCCCC
Q 001400 838 LEDRL-QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR--QETFARISGYCEQNDIHS 914 (1085)
Q Consensus 838 ~~~~~-~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~--~~~~~~~~gy~~Q~~~~~ 914 (1085)
.|+.. ++++||||+++.||++||+|+|||||||+|++|+++.. |.+|.|+++|.+.. +...++.+|.++.+..++
T Consensus 10 ~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY 87 (245)
T COG4555 10 SYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLY 87 (245)
T ss_pred hccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChh
Confidence 33433 48999999999999999999999999999999999877 56999999999864 345788999999888889
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
..+|++||+.|.+.+. +....+.+++++++.+.++|.++.|..++ +||.|+||||+|||||+++|++++|||
T Consensus 88 ~RlT~rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDE 159 (245)
T COG4555 88 ARLTARENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDE 159 (245)
T ss_pred hhhhHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcC
Confidence 9999999999988776 34456667889999999999999998874 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
||||||..+.+.+.+.++++.+.|++||++||.++ ++.+.||+++++++ |++++.|+...
T Consensus 160 P~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~~ 219 (245)
T COG4555 160 PTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIEA 219 (245)
T ss_pred CCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHHH
Confidence 99999999999999999999888999999999986 68889999999996 68999998754
No 67
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.4e-41 Score=341.66 Aligned_cols=211 Identities=24% Similarity=0.341 Sum_probs=180.3
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCC
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDW 219 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~ 219 (1085)
.++.||+|||+.|++||+++|+|||||||||||++|.|++.|+ +|+|.+.|.++.... .++++|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 3467999999999999999999999999999999999999987 999999999886653 2467999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1085)
+|..+||+||+.|..+-+.. .|+.. .+..+..-|+..||... +
T Consensus 96 LFssltV~eNVafplre~~~-------------------lp~~~--------------i~~lv~~KL~~VGL~~~----~ 138 (263)
T COG1127 96 LFSSLTVFENVAFPLREHTK-------------------LPESL--------------IRELVLMKLELVGLRGA----A 138 (263)
T ss_pred cccccchhHhhheehHhhcc-------------------CCHHH--------------HHHHHHHHHHhcCCChh----h
Confidence 99999999999997653211 11111 12235556788999765 2
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
.+.++..||||++||+++|||++.+|+++|+||||+||||.++..+.++++++.+.++-| +++++|+.++++..+|+|+
T Consensus 139 ~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T-~i~VTHDl~s~~~i~Drv~ 217 (263)
T COG1127 139 ADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLT-VIMVTHDLDSLLTIADRVA 217 (263)
T ss_pred hhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCE-EEEEECChHHHHhhhceEE
Confidence 235667899999999999999999999999999999999999999999999999887655 4558899999999999999
Q ss_pred EecCCeEEEecChhhHHH
Q 001400 380 LLSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~~ 397 (1085)
+|.+|+|+.+|+++++.+
T Consensus 218 ~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 218 VLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEeCCEEEEeCCHHHHHh
Confidence 999999999999999864
No 68
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-41 Score=349.32 Aligned_cols=194 Identities=25% Similarity=0.376 Sum_probs=171.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1085)
..+|+|+|++|.+||+++|+|||||||||||++|+|+..|+ +|+|.++|.++ ..+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHH
Confidence 57999999999999999999999999999999999999887 99999999987 34667899999999999999999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccC
Q 001400 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1085)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1085)
||+.|+....+... .+...+++++|+.+||.+..|.. +.+|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~~~-----P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFEDKY-----PHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhhcC-----cccc
Confidence 99999887654211 01123588899999999988754 5679
Q ss_pred chhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC--Ce
Q 001400 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE--GQ 385 (1085)
Q Consensus 308 SGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~--G~ 385 (1085)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+..+ .+++.++|+.+|+..++|||++|++ |+
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~-~TvllVTHdi~EAv~LsdRivvl~~~P~~ 210 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETR-KTVLLVTHDVDEAVYLADRVVVLSNRPGR 210 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHhhhCEEEEecCCCcc
Confidence 99999999999999999999999999999999999999999999887654 5566689999999999999999998 44
Q ss_pred E
Q 001400 386 I 386 (1085)
Q Consensus 386 i 386 (1085)
|
T Consensus 211 i 211 (248)
T COG1116 211 I 211 (248)
T ss_pred e
Confidence 4
No 69
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-41 Score=370.68 Aligned_cols=214 Identities=28% Similarity=0.370 Sum_probs=189.6
Q ss_pred cccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEcc
Q 001400 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQ 909 (1085)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q 909 (1085)
+++++.+.+++..+|+|||++|+.||+++|+|||||||||||++|+|+.. +.+|+|.|+|.+.+. ....|.+|+|||
T Consensus 5 ~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ 82 (338)
T COG3839 5 ELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQ 82 (338)
T ss_pred EEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeC
Confidence 34455555666559999999999999999999999999999999999887 579999999998775 345688999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 910 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
+..++|++||+||+.|+..++. ...++.+++++++.+.+++.++.+... .+|||||||||+|||||+++|++
T Consensus 83 ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQrQRVAlaRAlVr~P~v 154 (338)
T COG3839 83 NYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQRQRVALARALVRKPKV 154 (338)
T ss_pred CccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhHHHHHHHHHHhcCCCE
Confidence 9999999999999999987653 345667788999999999999988763 58999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
++||||.|+||++.+..+...|+++.++ |.|+|.+|||.. +.+..+||+++|+ +|++...|...+
T Consensus 155 ~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~p~e 220 (338)
T COG3839 155 FLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGTPLE 220 (338)
T ss_pred EEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCChHH
Confidence 9999999999999999999999998765 899999999974 7888999999998 689999887654
No 70
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-41 Score=331.64 Aligned_cols=207 Identities=29% Similarity=0.354 Sum_probs=183.3
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC--CCCceEEEEccCCCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 224 (1085)
..++++||||.++.|++++|+|||||||||+|++|++++.|+ +|.|+++|.+.... ..++.+|.++.+..++..|
T Consensus 14 ~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~Rl 90 (245)
T COG4555 14 KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARL 90 (245)
T ss_pred HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhh
Confidence 445999999999999999999999999999999999999887 99999999987543 3468899999888889999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
|++|||.|.+++.+.. + .+.+.+++++.+.|+|..|.|+.+|+
T Consensus 91 T~rEnl~~Fa~L~~l~----------~------------------------~~~kari~~l~k~l~l~~~~~rRv~~--- 133 (245)
T COG4555 91 TARENLKYFARLNGLS----------R------------------------KEIKARIAELSKRLQLLEYLDRRVGE--- 133 (245)
T ss_pred hHHHHHHHHHHHhhhh----------h------------------------hHHHHHHHHHHHHhChHHHHHHHHhh---
Confidence 9999999988775422 1 12245689999999999999999874
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
+|-|+||||+|||||+.+|+++++||||||||..+...+.+.++++... +.+|+..+|..+|+..+||+|++|++|
T Consensus 134 --~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~e--gr~viFSSH~m~EvealCDrvivlh~G 209 (245)
T COG4555 134 --FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNE--GRAVIFSSHIMQEVEALCDRVIVLHKG 209 (245)
T ss_pred --hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcC--CcEEEEecccHHHHHHhhheEEEEecC
Confidence 9999999999999999999999999999999999999999999988653 456666789999999999999999999
Q ss_pred eEEEecChhhHHH
Q 001400 385 QIVYQGPRVSVLD 397 (1085)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1085)
++++.|+.+++.+
T Consensus 210 evv~~gs~~~l~~ 222 (245)
T COG4555 210 EVVLEGSIEALDA 222 (245)
T ss_pred cEEEcCCHHHHHH
Confidence 9999999988754
No 71
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.6e-40 Score=406.03 Aligned_cols=227 Identities=41% Similarity=0.692 Sum_probs=204.1
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC-eeeeEEEEcCccCChhcccceEEEEccCCCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999986542 357999999998776667888999999999999999
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPG-INGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
|+||+.|++.++.+.....+++++.++++++.+++.+.+|..++.++ ..+||||||||++||+||+.+|+||+|||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999988877665666777789999999999999999887543 45799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCchHHHHHHHHhccccc
Q 001400 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEVESFMF 1072 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~~~~~~~~~~~~~g~~ 1072 (1085)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.|+. +++.+||+++ |-+
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g~~ 264 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-GHP 264 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-CCC
Confidence 9999999999999999988899999999999877899999999998 5799999995 5789999998 544
No 72
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-41 Score=371.77 Aligned_cols=215 Identities=26% Similarity=0.382 Sum_probs=190.2
Q ss_pred cccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEcc
Q 001400 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQ 909 (1085)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q 909 (1085)
+++++.+.+++..+|+|||++|++||+++|+|||||||||||++|+|... +.+|+|.++|.++.. ...+|.+|+|||
T Consensus 7 ~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i~~lpp~kR~ig~VFQ 84 (352)
T COG3842 7 EIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDITDVPPEKRPIGMVFQ 84 (352)
T ss_pred EEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhhcccceeec
Confidence 44556667788999999999999999999999999999999999999887 569999999998765 345788999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 910 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
+..+||++||+||+.|+..++. ....++.++++++++++++|.++.+... .+|||||||||+|||||+.+|++
T Consensus 85 ~YALFPHltV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQqQRVALARAL~~~P~v 157 (352)
T COG3842 85 SYALFPHMTVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQQRVALARALVPEPKV 157 (352)
T ss_pred CcccCCCCcHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHHHHHHHHHHhhcCcch
Confidence 9999999999999999976432 2344556778999999999999887753 58999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|+||||.|+||..-+..+...++++.+ .|.|.|++|||.+ +.+..+|||.+|++ |+++..|+..+
T Consensus 158 LLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gtP~e 223 (352)
T COG3842 158 LLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGTPEE 223 (352)
T ss_pred hhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCCHHH
Confidence 999999999999999999999999975 4999999999986 68889999999984 79998887764
No 73
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.5e-40 Score=325.20 Aligned_cols=201 Identities=27% Similarity=0.352 Sum_probs=173.8
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~~~~ 915 (1085)
..+|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.. .-.+|+||+|+|+.-+.+
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~ 92 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLP 92 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecccccccccchhhheeeeEeeeccccc
Confidence 569999999999999999999999999999999999766 568999999998643 236789999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
..||+||+.|...... ....+.++.+.++++.+||.+..+.+. .+||||||||++||||++.+|++|+.|||
T Consensus 93 ~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~lP-----~~LSGGEQQRvaIARAiV~~P~vLlADEP 164 (223)
T COG2884 93 DRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARALP-----SQLSGGEQQRVAIARAIVNQPAVLLADEP 164 (223)
T ss_pred cchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcCc-----cccCchHHHHHHHHHHHccCCCeEeecCC
Confidence 9999999999865543 344566678899999999988877653 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|.+|||.....||+++.++...|.|||+.|||.++ +...-.|++.+.+ |+++.+...
T Consensus 165 TGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~d~~~ 221 (223)
T COG2884 165 TGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVRDESR 221 (223)
T ss_pred CCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEecccc
Confidence 99999999999999999998889999999999653 4444468888875 688776543
No 74
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-40 Score=336.25 Aligned_cols=216 Identities=25% Similarity=0.356 Sum_probs=180.8
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQ 220 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~ 220 (1085)
.+++|+|||+.|++|||++|+|||||||||||++|.|+.++. +|+|.+||.++.... .++.+||++|+..+
T Consensus 16 ~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 16 GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 457999999999999999999999999999999999988776 999999998776543 24789999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
.+.+||.+|+..+..-+ .+.+ ....+..+..| +.+.-+.|+.+||.+.+-+..+
T Consensus 93 v~r~sv~~NVl~grl~~--~s~~---------~slfglfsk~d---------------k~~Al~aLervgi~~~A~qra~ 146 (258)
T COG3638 93 VPRLSVLENVLLGRLGY--TSTW---------RSLFGLFSKED---------------KAQALDALERVGILDKAYQRAS 146 (258)
T ss_pred ccccHHHHHHHhhhccc--chHH---------HHHhCCCCHHH---------------HHHHHHHHHHcCcHHHHHHHhc
Confidence 99999999998864321 1111 11122222222 3346678999999988877665
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+|||||+|||+|||||+.+|++++-|||+++||+.++.++++.|++++...|.|+|+ .+|..+-+.++||||+-
T Consensus 147 -----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~-nLH~vdlA~~Y~~Riig 220 (258)
T COG3638 147 -----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIV-NLHQVDLAKKYADRIIG 220 (258)
T ss_pred -----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEE-EechHHHHHHHHhhheE
Confidence 599999999999999999999999999999999999999999999999876556555 56778999999999999
Q ss_pred ecCCeEEEecChhhHHH
Q 001400 381 LSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~~ 397 (1085)
|++|+|+|.||++++.+
T Consensus 221 l~~G~ivfDg~~~el~~ 237 (258)
T COG3638 221 LKAGRIVFDGPASELTD 237 (258)
T ss_pred ecCCcEEEeCChhhhhH
Confidence 99999999999988654
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=330.81 Aligned_cols=221 Identities=25% Similarity=0.375 Sum_probs=180.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhC--CCCceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
+.+|+|||+.|+++++||++|||||||||||++|....+ +..+++|+|.|+|+++.+. ..++.+|+|+|.|.-
T Consensus 20 ~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnP 99 (253)
T COG1117 20 KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNP 99 (253)
T ss_pred hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCC
Confidence 469999999999999999999999999999999987643 3557899999999987554 246899999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcc-cccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTLV 299 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 299 (1085)
|| +|++||+.|+.+.+|... +.+ +.+|+..|+.-+|-+ ..|.+
T Consensus 100 Fp-~SIydNVayG~r~~g~~~--~~l--------------------------------deiVe~sLk~AaLWdEVKDrL- 143 (253)
T COG1117 100 FP-MSIYDNVAYGLRLHGIKD--KEL--------------------------------DEIVESSLKKAALWDEVKDRL- 143 (253)
T ss_pred CC-chHHHHHHHhHHhhccch--HHH--------------------------------HHHHHHHHHHhHhHHHhHHHh-
Confidence 99 899999999999886533 111 123444444444432 22222
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
++...+|||||+||++|||||+-+|+||+||||||+|||.++..|-+++.++.+ .-+|++++|...++....|+..
T Consensus 144 -~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~ta 219 (253)
T COG1117 144 -HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTA 219 (253)
T ss_pred -hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhh
Confidence 123457999999999999999999999999999999999999999999999875 3456668999999999999999
Q ss_pred EecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHH
Q 001400 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl 416 (1085)
.+..|+++++|+.+++ |..|.++.+.||+
T Consensus 220 Ff~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 220 FFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 9999999999999887 4467776666665
No 76
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.9e-39 Score=364.71 Aligned_cols=209 Identities=28% Similarity=0.371 Sum_probs=179.2
Q ss_pred cccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCC
Q 001400 835 EGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDI 912 (1085)
Q Consensus 835 ~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~ 912 (1085)
+++.+++..+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|+++.. ...++.+||++|++.
T Consensus 13 l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~ 90 (306)
T PRK13537 13 VEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPVPSRARHARQRVGVVPQFDN 90 (306)
T ss_pred EEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEecccchHHHHhcEEEEeccCc
Confidence 3334456789999999999999999999999999999999999876 568999999998643 345678999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+++.+|++||+.|.+.++. ....+....++++++.+++.+..+..+ .+||+|||||++||+||+.+|++|||
T Consensus 91 ~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~aL~~~P~lllL 162 (306)
T PRK13537 91 LDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGMKRRLTLARALVNDPDVLVL 162 (306)
T ss_pred CCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 9999999999987665432 222333456788999999987776654 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 163 DEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~~~ 223 (306)
T PRK13537 163 DEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGAPH 223 (306)
T ss_pred eCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999999999877999999999987 57788999999985 7899998754
No 77
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.8e-40 Score=326.93 Aligned_cols=215 Identities=21% Similarity=0.324 Sum_probs=188.7
Q ss_pred ccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEE
Q 001400 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYC 907 (1085)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~ 907 (1085)
.+++.+.|++++++++||++|++||++||+|||||||||.+.++.|... +.+|.|.+||.+++. ...+..+||+
T Consensus 7 a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYL 84 (243)
T COG1137 7 AENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYL 84 (243)
T ss_pred ehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccc
Confidence 4556677889999999999999999999999999999999999999877 568999999998764 2334569999
Q ss_pred ccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 908 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 908 ~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
||++..|..+||+||++.-...+.. +....+++..++++++.+++.++++... ..||||||+|+.|||||+.+|
T Consensus 85 pQE~SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P 158 (243)
T COG1137 85 PQEASIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANP 158 (243)
T ss_pred cccchHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCC
Confidence 9999999999999999866555532 2233456667889999999999988753 479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
+.++||||++|+||-+...|+++++.++++|..|++|-|... +....|||.+++.+ |++.+.|...+
T Consensus 159 ~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~e 225 (243)
T COG1137 159 KFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPEE 225 (243)
T ss_pred CEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHHH
Confidence 999999999999999999999999999999999999999987 78899999999985 79999998765
No 78
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.8e-39 Score=338.61 Aligned_cols=196 Identities=27% Similarity=0.429 Sum_probs=166.9
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-------CceEEEEccCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1085)
..++|+++|+.|++||+++|+|||||||||||++|+|+..|+ +|.|.++|.++..... ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 368999999999999999999999999999999999998876 9999999988876532 367999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccc-cc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCAD-TL 298 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d-t~ 298 (1085)
++|++||+||+..+....+.... .....++.+++.+||.+..+ ..
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~ 139 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKK 139 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCC
Confidence 99999999999987665543211 01234788899999987655 43
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
+..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++++.. ++++++++|+ +++...|||+
T Consensus 140 -----p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~-g~tii~VTHd-~~lA~~~dr~ 212 (226)
T COG1136 140 -----PSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKER-GKTIIMVTHD-PELAKYADRV 212 (226)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhc-CCEEEEEcCC-HHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999998765 4555557676 5677899999
Q ss_pred EEecCCeE
Q 001400 379 ILLSEGQI 386 (1085)
Q Consensus 379 i~L~~G~i 386 (1085)
+.|.+|++
T Consensus 213 i~l~dG~~ 220 (226)
T COG1136 213 IELKDGKI 220 (226)
T ss_pred EEEeCCee
Confidence 99999994
No 79
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=8.6e-39 Score=361.95 Aligned_cols=206 Identities=22% Similarity=0.335 Sum_probs=177.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC------CceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 221 (1085)
+++|+|+|++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999876 9999999998865432 46799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||+||+.|+....+... .+...++.++++.+||.+..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998654332100 001234778999999998777654
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..|||||||||+|||||+.+|++|+|||||||||+.++..+.+.|+++.+..+ .+|+.++|..+.+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 56999999999999999999999999999999999999999999999987544 45556889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988874
No 80
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.4e-39 Score=362.48 Aligned_cols=202 Identities=26% Similarity=0.323 Sum_probs=175.4
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh------cccceEEEEccCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSP 915 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gy~~Q~~~~~~ 915 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+..+++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~ 95 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLS 95 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccc
Confidence 579999999999999999999999999999999999876 5689999999876431 24668999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
..||+||+.|...... ....+.++.+.++++.+++.+..+... .+||||||||++|||||+.+|++|+||||
T Consensus 96 ~~tv~eni~~~~~~~~---~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LSgGqkQRV~IARAL~~~P~iLLlDEP 167 (343)
T TIGR02314 96 SRTVFGNVALPLELDN---TPKDEIKRKVTELLALVGLGDKHDSYP-----SNLSGGQKQRVAIARALASNPKVLLCDEA 167 (343)
T ss_pred cCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 9999999998754321 233445567889999999988777653 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|+ +|++++.|+..
T Consensus 168 ts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~-~G~iv~~g~~~ 226 (343)
T TIGR02314 168 TSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVIS-NGELIEQGTVS 226 (343)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 9999999999999999999765 999999999986 4778899999998 47999998754
No 81
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.7e-39 Score=357.22 Aligned_cols=186 Identities=22% Similarity=0.214 Sum_probs=139.3
Q ss_pred EEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHH
Q 001400 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLES 922 (1085)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e~ 922 (1085)
+++.++++.+..-..++++|+||+||||+++++.|..+ +..|-+.+.+ +++++|..|...-+..+.|-+-
T Consensus 378 ~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~--------r~ri~~f~Qhhvd~l~~~v~~v 447 (582)
T KOG0062|consen 378 QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP--------RLRIKYFAQHHVDFLDKNVNAV 447 (582)
T ss_pred hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc--------cceecchhHhhhhHHHHHhHHH
Confidence 67889999999999999999999999999999998654 3567666654 4678999997554433333332
Q ss_pred HHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHH
Q 001400 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1085)
Q Consensus 923 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~ 1002 (1085)
- +-...+ | .. ..+.+++-+..+|+..-. ...+ +.+||||||-||++|.....+|.+|+|||||+.||..
T Consensus 448 d-~~~~~~-p-G~----~~ee~r~hl~~~Gl~g~l---a~~s-i~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~d 516 (582)
T KOG0062|consen 448 D-FMEKSF-P-GK----TEEEIRRHLGSFGLSGEL---ALQS-IASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRD 516 (582)
T ss_pred H-HHHHhC-C-CC----CHHHHHHHHHhcCCCchh---hhcc-ccccCCcchhHHHHHHHhcCCCcEEEecCCCccccHH
Confidence 2 111111 1 11 123355667777776422 2112 4679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecC
Q 001400 1003 AAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1085)
Q Consensus 1003 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~ 1053 (1085)
+-..+-++|+++ +..|||||||.++ +-..|+++++.++|...-..|.
T Consensus 517 sl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 517 SLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred HHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeecc
Confidence 999999999885 5689999999764 6778999999997654445554
No 82
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-39 Score=331.53 Aligned_cols=225 Identities=28% Similarity=0.388 Sum_probs=190.5
Q ss_pred cccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEE
Q 001400 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGY 906 (1085)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy 906 (1085)
+.+++++.++...+++||||++++||++||+||||||||||+|+|+|..+ +.+|+|.++|.++.. +..+..++.
T Consensus 6 ~v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~R 83 (250)
T COG0411 6 EVRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIAR 83 (250)
T ss_pred eeccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhcccee
Confidence 34556667788999999999999999999999999999999999999877 568999999998753 234556889
Q ss_pred EccCCCCCCCCCHHHHHHHhhhhc--------CCCc-ccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHH
Q 001400 907 CEQNDIHSPGLTVLESLLFSAWLR--------LPSE-IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRL 977 (1085)
Q Consensus 907 ~~Q~~~~~~~~tv~e~l~~~~~~~--------~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl 977 (1085)
-||...+|+++||.||++.++..+ .+.. ....+..+.+.++++.++|.+.++...+ +||+||||||
T Consensus 84 TFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~L 158 (250)
T COG0411 84 TFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRL 158 (250)
T ss_pred ecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHH
Confidence 999999999999999998875422 1111 1234556778899999999999988763 7999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 978 TIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 978 ~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
.|||||+.+|++|+||||.+||.+.....+.+.|+++.+ .|.||++|-||++. ++..|||++||+. |++++.|+..+
T Consensus 159 EIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~e 236 (250)
T COG0411 159 EIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPEE 236 (250)
T ss_pred HHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHHH
Confidence 999999999999999999999999999999999999987 47999999999985 8999999999985 79999998765
Q ss_pred --chHHHHHH
Q 001400 1057 --KSCELIKY 1064 (1085)
Q Consensus 1057 --~~~~~~~~ 1064 (1085)
+...+++-
T Consensus 237 V~~dp~VieA 246 (250)
T COG0411 237 VRNNPRVIEA 246 (250)
T ss_pred HhcCHHhHHH
Confidence 23344443
No 83
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-39 Score=331.94 Aligned_cols=200 Identities=27% Similarity=0.373 Sum_probs=168.8
Q ss_pred EEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh----cccceEEEEccCCC--CCCC
Q 001400 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDI--HSPG 916 (1085)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gy~~Q~~~--~~~~ 916 (1085)
.+|+||||+|.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.... .+.+.+.+|||+|. +-|.
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~ 98 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPR 98 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCcccCccccchhhccceeEEecCCccccCcc
Confidence 49999999999999999999999999999999999877 5689999999875432 46788999999986 4588
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.||.+.|.-.... ......+ +.+.++++.+||.+- .+.. +.+||||||||+||||||+.+|++||+|||
T Consensus 99 ~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~eLSGGQ~QRiaIARAL~~~PklLIlDEp 168 (252)
T COG1124 99 RTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHELSGGQRQRIAIARALIPEPKLLILDEP 168 (252)
T ss_pred hhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chhcChhHHHHHHHHHHhccCCCEEEecCc
Confidence 9999988654332 1222222 238899999999653 2322 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
||+||+..++.|++++.++.+ .+.|.|+||||.+. +...|||+++|++ |++++.++.++
T Consensus 169 tSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ivE~~~~~~ 228 (252)
T COG1124 169 TSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQIVEIGPTEE 228 (252)
T ss_pred hhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-CeEEEeechhh
Confidence 999999999999999999975 48899999999874 7788999999985 79999998765
No 84
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-38 Score=346.03 Aligned_cols=205 Identities=26% Similarity=0.367 Sum_probs=172.8
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDI 912 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~ 912 (1085)
+++..+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~ 87 (235)
T cd03261 10 FGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGA 87 (235)
T ss_pred ECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccChhhHHHHhcceEEEccCcc
Confidence 345679999999999999999999999999999999999876 468999999987542 234667999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+++.+||+||+.+...... ........+.++++++.+++.+..+..+ ..||||||||++|||||+.+|+||||
T Consensus 88 ~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llll 160 (235)
T cd03261 88 LFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLY 160 (235)
T ss_pred cCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 8999999999987643221 1223334456788999999977665543 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 161 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 221 (235)
T cd03261 161 DEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVAEGTP 221 (235)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEEecCH
Confidence 9999999999999999999998764 899999999986 47778999999985 788888874
No 85
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=364.02 Aligned_cols=205 Identities=25% Similarity=0.358 Sum_probs=177.9
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEccCCCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
++..+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|.+|
T Consensus 15 ~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~t 92 (356)
T PRK11650 15 GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMS 92 (356)
T ss_pred CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCccccCCCC
Confidence 44679999999999999999999999999999999999876 568999999987643 223578999999999999999
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsg 998 (1085)
|+||+.|+...+. ....+..+.++++++.+++.++.+... .+|||||||||+|||||+.+|+||+||||||+
T Consensus 93 v~eNi~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvalARAL~~~P~llLLDEP~s~ 164 (356)
T PRK11650 93 VRENMAYGLKIRG---MPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQRVAMGRAIVREPAVFLFDEPLSN 164 (356)
T ss_pred HHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999998764321 233444567889999999988777653 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 999 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
||+.++..+.+.|+++.++ |.|+|++|||++ ++.+.+|++++|+ +|+++..|+..+
T Consensus 165 LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~-~G~i~~~g~~~~ 221 (356)
T PRK11650 165 LDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMN-GGVAEQIGTPVE 221 (356)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEECCHHH
Confidence 9999999999999998765 999999999986 5888999999997 579999987643
No 86
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.5e-38 Score=362.59 Aligned_cols=207 Identities=26% Similarity=0.373 Sum_probs=179.9
Q ss_pred cccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEccCCCCCC
Q 001400 837 VLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSP 915 (1085)
Q Consensus 837 ~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q~~~~~~ 915 (1085)
+.+++..+|+|+||++++||+++|+|||||||||||++|+|... +.+|+|.++|.+... ...+|.+|||+|++.++|
T Consensus 12 ~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp 89 (353)
T TIGR03265 12 KRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDITRLPPQKRDYGIVFQSYALFP 89 (353)
T ss_pred EEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCC
Confidence 33455679999999999999999999999999999999999876 568999999987643 234678999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.+||+||+.|+...+ .....+.++.++++++.++|.++.+... .+|||||||||+|||||+.+|++|+||||
T Consensus 90 ~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~QRvaLARaL~~~P~llLLDEP 161 (353)
T TIGR03265 90 NLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQQRVALARALATSPGLLLLDEP 161 (353)
T ss_pred CCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 999999999986533 2233445667899999999988877653 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||+||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|+..
T Consensus 162 ~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~~~ 220 (353)
T TIGR03265 162 LSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGTPQ 220 (353)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999999998765 899999999986 67889999999985 7899998764
No 87
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-38 Score=360.04 Aligned_cols=212 Identities=25% Similarity=0.341 Sum_probs=180.6
Q ss_pred ccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEcc
Q 001400 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQ 909 (1085)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q 909 (1085)
++++++.+++..+|+||||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|
T Consensus 44 i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~~~~~~~~~~~~ig~v~q 121 (340)
T PRK13536 44 LAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVPVPARARLARARIGVVPQ 121 (340)
T ss_pred EEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEECCcchHHHhccEEEEeC
Confidence 3444455567789999999999999999999999999999999999876 568999999988643 245678999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 910 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
++.+++.+|+.||+.|.+..+. ....+..+.++++++.+++.+..+..+ .+||+|||||++||+||+.+|++
T Consensus 122 ~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~kqrv~lA~aL~~~P~l 193 (340)
T PRK13536 122 FDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGMKRRLTLARALINDPQL 193 (340)
T ss_pred CccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999987554332 122333455778899999987777654 47999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||||+|||+.++..++++|+++.++|.|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 194 LiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~~~ 257 (340)
T PRK13536 194 LILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGRPH 257 (340)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999999999999999878999999999987 57788999999985 7999998764
No 88
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.9e-38 Score=362.17 Aligned_cols=207 Identities=25% Similarity=0.347 Sum_probs=179.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCcee--eEEEECCccCCCCCC-CceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVS--GKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~--G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 224 (1085)
..+|+|+|++|++|++++|+|||||||||||++|+|+++|+ + |+|.++|.++....+ ++.++||+|+..+|+++
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35999999999999999999999999999999999998876 7 999999998765433 46799999999999999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||+||+.|+.+..+... .+.+.+++++++.+||++..|+.+
T Consensus 95 tv~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~----- 135 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP----- 135 (362)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----
Confidence 99999999765432110 001234788999999998877655
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
+.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 136 ~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 136 AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999876543556677889999999999999999999
Q ss_pred eEEEecChhhHH
Q 001400 385 QIVYQGPRVSVL 396 (1085)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1085)
+++..|+++++.
T Consensus 216 ~i~~~g~~~~~~ 227 (362)
T TIGR03258 216 RLAAHGEPQALY 227 (362)
T ss_pred EEEEEcCHHHHH
Confidence 999999998874
No 89
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=327.93 Aligned_cols=205 Identities=25% Similarity=0.319 Sum_probs=176.6
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC----CCceEEEEccCCC--CCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDW--QVA 222 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~--~~~ 222 (1085)
++|+|||++|.+||.++|+|+||||||||.++|+|+..|+ +|+|.++|.+..... ..+.+-+|+||+. +-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999887 999999998765543 3578899999974 678
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
..||++.|.-+.+..+.. +.+.++.++|+.+||+...- ++
T Consensus 98 ~~tv~~~l~Epl~~~~~~------------------------------------~~~~~i~~~L~~VgL~~~~l----~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLS------------------------------------KSQQRIAELLDQVGLPPSFL----DR 137 (252)
T ss_pred chhHHHHHhhhhccCCcc------------------------------------HHHHHHHHHHHHcCCCHHHH----hc
Confidence 899999997655432211 11233788999999986432 34
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
.+..|||||||||+|||||..+|++|++|||||+||++.+.+|++.|.++.+.. +.+.+.++|+..-+..+||||++|+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~-~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKER-GLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhc-CceEEEEeCcHHHHHHHhhheeeee
Confidence 566799999999999999999999999999999999999999999999998765 4566779999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 001400 383 EGQIVYQGPRVSVLD 397 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1085)
+|++++.++.+++.+
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999998864
No 90
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=364.26 Aligned_cols=206 Identities=27% Similarity=0.366 Sum_probs=178.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1085)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 35999999999999999999999999999999999998876 9999999998865443 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.|+.+..+... .+...+++++++.+||++..+..+ +.
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMPK----------------------------------AEIEERVAEAARILELEPLLDRKP-----RE 134 (356)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hh
Confidence 999999765322100 001234788999999988777654 56
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||+|||||+.+|++|+||||||+||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999987654 45566688999999999999999999999
Q ss_pred EEecChhhHH
Q 001400 387 VYQGPRVSVL 396 (1085)
Q Consensus 387 v~~G~~~~~~ 396 (1085)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999998874
No 91
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=361.15 Aligned_cols=205 Identities=24% Similarity=0.392 Sum_probs=178.7
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh-cccceEEEEccCCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGL 917 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gy~~Q~~~~~~~~ 917 (1085)
+++..+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... ..+|.+|||+|++.++|++
T Consensus 16 ~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~ 93 (351)
T PRK11432 16 FGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHM 93 (351)
T ss_pred ECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCC
Confidence 345679999999999999999999999999999999999876 5689999999876532 2357899999999999999
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
||+||+.|+...+. ....+..+.++++++.+++.++.+... ..|||||||||+|||||+.+|++|+||||||
T Consensus 94 tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s 165 (351)
T PRK11432 94 SLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQQRVALARALILKPKVLLFDEPLS 165 (351)
T ss_pred CHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCcc
Confidence 99999999865432 233455667899999999988776653 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+||+.++..+.+.|+++.++ |.|+|++|||++ ++.+.+|++++|++ |+++..|+..
T Consensus 166 ~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~~~ 222 (351)
T PRK11432 166 NLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGSPQ 222 (351)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 99999999999999999765 899999999986 57888999999985 7899888764
No 92
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=361.64 Aligned_cols=206 Identities=24% Similarity=0.373 Sum_probs=178.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1085)
..+|+|+|+.+++||+++|+|||||||||||++|+|+++++ +|+|.++|.++....+ +|.++||+|+..+||++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999876 9999999998866544 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.|+.+.++... .+.+.+++++++.+||.+..+.. ++.
T Consensus 96 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----VDQ 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhh
Confidence 999999865432110 01123478899999998877654 457
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+ ++++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFN-ITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876544 4566688999999999999999999999
Q ss_pred EEecChhhHH
Q 001400 387 VYQGPRVSVL 396 (1085)
Q Consensus 387 v~~G~~~~~~ 396 (1085)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 93
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=339.65 Aligned_cols=201 Identities=26% Similarity=0.376 Sum_probs=178.1
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCC----hhcccceEEEEccCCCC-CCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR----QETFARISGYCEQNDIH-SPG 916 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~----~~~~~~~~gy~~Q~~~~-~~~ 916 (1085)
..+|+++|++|++|+.++|+|+||||||||+++|+|... +.+|.|.++|.+.. ...+++.+|||+|+|.. +..
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~ 94 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFG 94 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeeccchhhHHHhhcceEEEEECccccccc
Confidence 589999999999999999999999999999999999877 46899999999855 45678899999999865 457
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
-||.|.+.|+.... ..+.++.+++++++++.+++.++++... ..|||||||||+||.+|+.+|++|+|||||
T Consensus 95 ~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----~~LSGGqkqRvaIA~vLa~~P~iliLDEPt 166 (235)
T COG1122 95 PTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRPP-----FNLSGGQKQRVAIAGVLAMGPEILLLDEPT 166 (235)
T ss_pred CcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCCc-----cccCCcceeeHHhhHHHHcCCCEEEEcCCC
Confidence 79999999986533 3444567788999999999998877643 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
||||+.+++.+++.++++.++ |.|||++|||.+ .+.+.+|++++|++ |++++.|+.
T Consensus 167 a~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~~g~p 223 (235)
T COG1122 167 AGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILADGDP 223 (235)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEeecCCH
Confidence 999999999999999999877 689999999987 47788999999985 799999974
No 94
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.6e-38 Score=355.90 Aligned_cols=204 Identities=27% Similarity=0.379 Sum_probs=175.8
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~~ 917 (1085)
++..+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++.+++.+
T Consensus 4 ~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 81 (302)
T TIGR01188 4 GDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDL 81 (302)
T ss_pred CCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCC
Confidence 45679999999999999999999999999999999999876 568999999987643 23466799999999999999
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
||+||+.+.+.++. .......+.++++++.+++.+..+..+ ..||||||||++||+||+.+|++|||||||+
T Consensus 82 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 82 TGRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999988665432 222334456789999999987766654 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+.++..+++.|+++.++|.|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~~ 209 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTPE 209 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 99999999999999999877999999999986 57788999999985 7899888753
No 95
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.8e-38 Score=360.84 Aligned_cols=205 Identities=27% Similarity=0.336 Sum_probs=177.8
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeee--eEEEEcCccCCh-hcccceEEEEccCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIE--GDIYISGYPKRQ-ETFARISGYCEQNDIHSP 915 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~--G~i~i~g~~~~~-~~~~~~~gy~~Q~~~~~~ 915 (1085)
+++..+|+|+||+|++||+++|+|||||||||||++|+|... +.+ |+|.++|.++.. ...++.+||++|++.++|
T Consensus 15 ~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p 92 (362)
T TIGR03258 15 YGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADRDLTHAPPHKRGLALLFQNYALFP 92 (362)
T ss_pred ECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCEECCCCCHHHCCEEEEECCcccCC
Confidence 345679999999999999999999999999999999999876 457 999999987643 224577999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.+||+||+.|+...+ .....+.++.++++++.++|.++.+... .+|||||||||+|||||+.+|++|+||||
T Consensus 93 ~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvaLARAL~~~P~llLLDEP 164 (362)
T TIGR03258 93 HLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGGMQQRIAIARAIAIEPDVLLLDEP 164 (362)
T ss_pred CCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 999999999876433 2233445567899999999988877654 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC--CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT--GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+|||+..+..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|+..
T Consensus 165 ~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~~g~~~ 224 (362)
T TIGR03258 165 LSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAAHGEPQ 224 (362)
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999999999875 799999999986 57888999999985 7999998754
No 96
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2e-38 Score=311.71 Aligned_cols=200 Identities=26% Similarity=0.378 Sum_probs=177.1
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1085)
..+|+|||+.|++||++.|+||||||||||||+|.+...|+ +|+|.+||+++.... .+|.||+|+|+.-++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 56999999999999999999999999999999999998876 999999999986543 368999999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
++.||.||++|+.+..|... .+.+.++.++|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcC---
Confidence 99999999999987765322 11244688999999999988754
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
+..|||||||||+||||++.+|++|+.||||-+||+..+.+|++.+.++.+. +|+|++.+|+..-+..+--+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~--GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRL--GTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhc--CcEEEEEeccHHHHHhccCcEEEE
Confidence 4579999999999999999999999999999999999999999999998763 677777889999898999999999
Q ss_pred cCCeEEEecC
Q 001400 382 SEGQIVYQGP 391 (1085)
Q Consensus 382 ~~G~iv~~G~ 391 (1085)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999997653
No 97
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.2e-38 Score=387.05 Aligned_cols=256 Identities=29% Similarity=0.429 Sum_probs=201.1
Q ss_pred hHhhHHHHHHHhhcccCChHHHHHHHHHHHHhcCCCCCC--cEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHH
Q 001400 61 VQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPK--IEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQL 138 (1085)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 138 (1085)
.++-+...+|+.++.+.++|.-.. +.....|+ =+++|+|+++.=
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~-------~~~~~~~~~~g~I~~~nvsf~y--------------------------- 481 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGD-------KTLIHLPKLQGEIEFENVSFRY--------------------------- 481 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccc-------cccccccccCceEEEEEEEEEe---------------------------
Confidence 456788888999998888873111 11123333 479999998542
Q ss_pred hHhcCCCcceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEc
Q 001400 139 RIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVS 215 (1085)
Q Consensus 139 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~ 215 (1085)
...+..+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||+++++..+ ++.++||+
T Consensus 482 -----~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~ 553 (709)
T COG2274 482 -----GPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVL 553 (709)
T ss_pred -----CCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEc
Confidence 112236999999999999999999999999999999999999887 9999999999887754 68999999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccc
Q 001400 216 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 295 (1085)
Q Consensus 216 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 295 (1085)
|++.+|. .||+||+.++.. ....+.+.+++ ...+. .+ .+..++..+
T Consensus 554 Q~~~Lf~-gSI~eNi~l~~p----~~~~e~i~~A~---------------------~~ag~-----~~---fI~~lP~gy 599 (709)
T COG2274 554 QDPFLFS-GSIRENIALGNP----EATDEEIIEAA---------------------QLAGA-----HE---FIENLPMGY 599 (709)
T ss_pred ccchhhc-CcHHHHHhcCCC----CCCHHHHHHHH---------------------HHhCc-----HH---HHHhccccc
Confidence 9998555 599999988532 11112222222 11111 11 134689999
Q ss_pred cccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhc
Q 001400 296 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 375 (1085)
Q Consensus 296 dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~ 375 (1085)
||.||+ +..+||||||||++|||||+.+|+||+||||||+||+.+...|.+.|.++.+ ++|+|++. |. ..+...|
T Consensus 600 ~t~v~E-~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~Ia-HR-l~ti~~a 674 (709)
T COG2274 600 DTPVGE-GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIA-HR-LSTIRSA 674 (709)
T ss_pred cccccc-CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEE-cc-chHhhhc
Confidence 999996 4568999999999999999999999999999999999999999999999864 45666544 43 4578899
Q ss_pred CeEEEecCCeEEEecChhhHHH
Q 001400 376 DDVILLSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 376 D~ii~L~~G~iv~~G~~~~~~~ 397 (1085)
|+|++|++|+++.+|+.+++++
T Consensus 675 drIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 675 DRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred cEEEEccCCceeccCCHHHHHH
Confidence 9999999999999999999986
No 98
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.9e-38 Score=361.79 Aligned_cols=206 Identities=25% Similarity=0.394 Sum_probs=178.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1085)
+.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ +|.++||+|+..+||++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999998876 9999999998865433 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.|+.+.++... .+...+++++++.+||++..|..+ ..
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~L~~~~~~~~-----~~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMGR----------------------------------AEVAERVAELLDLVGLPGSERKYP-----GQ 134 (353)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCCchhhCCh-----hh
Confidence 999999765322100 001234888999999998877654 57
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||+|||||+.+|++++||||+++||..++.++.+.|+++.+..+ ++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~-~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLG-VTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876544 4556688999999999999999999999
Q ss_pred EEecChhhHH
Q 001400 387 VYQGPRVSVL 396 (1085)
Q Consensus 387 v~~G~~~~~~ 396 (1085)
++.|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (353)
T TIGR03265 214 EQVGTPQEIY 223 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 99
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.5e-39 Score=372.71 Aligned_cols=214 Identities=26% Similarity=0.424 Sum_probs=176.4
Q ss_pred cCCCcceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCC
Q 001400 142 RGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQD 218 (1085)
Q Consensus 142 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d 218 (1085)
++.+++.+||+|+|++|+|||.+||+|||||||||+.+.|-.+++|. +|+|++||+|+.+..+ ++.+|+|.|+|
T Consensus 475 YP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEP 551 (716)
T KOG0058|consen 475 YPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEP 551 (716)
T ss_pred cCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccc
Confidence 34456788999999999999999999999999999999999999887 9999999999988764 58999999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccc
Q 001400 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1085)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1085)
.+|.. ||+|||.|+.. ....+.+..+++ .++ ..+. +.++++.+||.
T Consensus 552 vLFs~-sI~eNI~YG~~----~~t~e~i~~AAk---~AN-----------------------ah~F---I~~~p~gY~T~ 597 (716)
T KOG0058|consen 552 VLFSG-SIRENIAYGLD----NATDEEIEAAAK---MAN-----------------------AHEF---ITNFPDGYNTV 597 (716)
T ss_pred eeecc-cHHHHHhcCCC----CCCHHHHHHHHH---HhC-----------------------hHHH---HHhCccccccc
Confidence 98775 99999999754 111121211111 111 0122 34689999999
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
||+++. +||||||||++|||||+.+|.||+|||.||+||+.+...+.+.|.+..+ ++| +++|.|.. .+.+.+|+|
T Consensus 598 VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rT-VlvIAHRL-STV~~Ad~I 672 (716)
T KOG0058|consen 598 VGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRT-VLVIAHRL-STVRHADQI 672 (716)
T ss_pred cCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCe-EEEEehhh-hHhhhccEE
Confidence 998654 7999999999999999999999999999999999999999999988754 344 45466655 566889999
Q ss_pred EEecCCeEEEecChhhHHH
Q 001400 379 ILLSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~~ 397 (1085)
+++++|++++.|+++++++
T Consensus 673 vvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 673 VVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEcCCeEEecccHHHHhh
Confidence 9999999999999999875
No 100
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-38 Score=338.47 Aligned_cols=200 Identities=28% Similarity=0.427 Sum_probs=170.8
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e 921 (1085)
..+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.++.. .++.++|++|++.+++..|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 579999999999999999999999999999999999865 468999999987642 3567999999998888899999
Q ss_pred HHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCH
Q 001400 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1085)
Q Consensus 922 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~ 1001 (1085)
|+.+....+. .......+.++++++.+++.+..+... ..||||||||++|||||+.+|++|||||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9987653321 122333456788999999976655543 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEec-CcEEEEecCC
Q 001400 1002 RAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 1054 (1085)
Q Consensus 1002 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~-gG~~~~~g~~ 1054 (1085)
.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ .|+++..+++
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999986 46788999999985 4899887765
No 101
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-38 Score=337.96 Aligned_cols=202 Identities=30% Similarity=0.422 Sum_probs=169.3
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh-cccceEEEEccCCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGL 917 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gy~~Q~~~~~~~~ 917 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+
T Consensus 10 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~ 87 (213)
T cd03259 10 YGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHL 87 (213)
T ss_pred eCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCC
Confidence 344679999999999999999999999999999999999866 5689999999876432 2346799999999888899
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
|++||+.+...... .......+.++++++.+++.+..+... ..||||||||++|||||+.+|++|||||||+
T Consensus 88 tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~ 159 (213)
T cd03259 88 TVAENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLS 159 (213)
T ss_pred cHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987643221 122333456788999999977665543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 998 GLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
|||+.++..+++.|+++++ .|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 160 ~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 160 ALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999876 4899999999986 46788999999986 6777654
No 102
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.7e-38 Score=359.46 Aligned_cols=211 Identities=27% Similarity=0.373 Sum_probs=178.9
Q ss_pred ccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEccCCCCC
Q 001400 836 GVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 836 ~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q~~~~~ 914 (1085)
.+.+++..+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.++
T Consensus 9 ~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~ 86 (353)
T PRK10851 9 KKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVSRLHARDRKVGFVFQHYALF 86 (353)
T ss_pred EEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHCCEEEEecCcccC
Confidence 333455679999999999999999999999999999999999876 568999999987643 22356799999999999
Q ss_pred CCCCHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 915 PGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
|.+||+||+.|+...+.. ......+..+.++++++.+++.+..+... .+||||||||++|||||+.+|++||||
T Consensus 87 p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~QRvalArAL~~~P~llLLD 161 (353)
T PRK10851 87 RHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQKQRVALARALAVEPQILLLD 161 (353)
T ss_pred CCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999987543210 11233445567889999999987776653 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+|||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |++++.|+..
T Consensus 162 EP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~~~ 222 (353)
T PRK10851 162 EPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGTPD 222 (353)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 999999999999999999999765 899999999986 57888999999985 7899988754
No 103
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4e-36 Score=393.21 Aligned_cols=201 Identities=26% Similarity=0.375 Sum_probs=174.8
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|+++.. ...++.+|||+|++.+++.+|
T Consensus 942 ~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LT 1019 (2272)
T TIGR01257 942 GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLT 1019 (2272)
T ss_pred CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCC
Confidence 4679999999999999999999999999999999999876 568999999988643 235677999999999999999
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsg 998 (1085)
|+||+.|.+.++. ....+.++.++++++.++|.+..+..+ .+|||||||||+||+||+.+|+||||||||+|
T Consensus 1020 V~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGGqKQRLsLArALi~~PkVLLLDEPTSG 1091 (2272)
T TIGR01257 1020 VAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSG 1091 (2272)
T ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcC
Confidence 9999998765542 222334456889999999988777654 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 999 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
||+.+++.++++|++++ +|+|||+|||+++ ++...+||+++|++ |+++..|+.
T Consensus 1092 LDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~Gs~ 1144 (2272)
T TIGR01257 1092 VDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSGTP 1144 (2272)
T ss_pred CCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999984 6999999999986 46678999999985 788888864
No 104
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.3e-38 Score=352.98 Aligned_cols=206 Identities=29% Similarity=0.378 Sum_probs=177.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1085)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999876 999999999875432 3467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.|.++..+... .+...+++++++.+||.+.+++.++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 137 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG----- 137 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----
Confidence 9999998655432110 0012246788999999988887764
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
+|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++++. +++|+.++|..+++.++||+|++|++|+
T Consensus 138 ~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~--g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 138 ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLAR--GKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999998643 4566668899999999999999999999
Q ss_pred EEEecChhhHHH
Q 001400 386 IVYQGPRVSVLD 397 (1085)
Q Consensus 386 iv~~G~~~~~~~ 397 (1085)
+++.|+++++..
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999988754
No 105
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.3e-38 Score=358.91 Aligned_cols=207 Identities=22% Similarity=0.303 Sum_probs=178.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1085)
+.+|+|+|++|++||+++|+|||||||||||++|+|+++|. +|+|.++|.++....+ ++.++||+|++.+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 46999999999999999999999999999999999999876 9999999998876543 5689999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++++||+||+.|+.+..+... .+...++.++++.+||++..++.+
T Consensus 83 ~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p- 127 (363)
T TIGR01186 83 FPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP- 127 (363)
T ss_pred CCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh-
Confidence 999999999999765432110 001234788899999987777655
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
..|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.++++.+..+ .+|+.++|+.+++..++|+|++
T Consensus 128 ----~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~-~Tii~vTHd~~ea~~~~drI~v 202 (363)
T TIGR01186 128 ----DELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQ-KTIVFITHDLDEAIRIGDRIVI 202 (363)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEE
Confidence 46999999999999999999999999999999999999999999999876444 4566688999999999999999
Q ss_pred ecCCeEEEecChhhHHH
Q 001400 381 LSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~~ 397 (1085)
|++|+++..|+++++..
T Consensus 203 l~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 203 MKAGEIVQVGTPDEILR 219 (363)
T ss_pred EeCCEEEeeCCHHHHHh
Confidence 99999999999988753
No 106
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=5.2e-38 Score=357.32 Aligned_cols=205 Identities=23% Similarity=0.308 Sum_probs=177.3
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcc----cceEEEEccCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETF----ARISGYCEQND 911 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~----~~~~gy~~Q~~ 911 (1085)
++++.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+ ++.+|||+|++
T Consensus 3 ~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 3 TGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred cCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 355679999999999999999999999999999999999877 568999999988653 222 56899999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.++|.+||+||+.|+.... .....+..+.+.++++.++|.+..+... .+|||||||||+|||||+.+|+|||
T Consensus 81 ~l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLL 152 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILL 152 (363)
T ss_pred cCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999876443 2234455667889999999987766543 5799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||++||+.++..+++.++++.++ |+|||++|||++ ++.+.+|++++|++ |+++..|+..
T Consensus 153 lDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 153 MDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 99999999999999999999999754 899999999986 47788999999975 7899988754
No 107
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.9e-38 Score=353.86 Aligned_cols=210 Identities=26% Similarity=0.340 Sum_probs=175.9
Q ss_pred ccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCC
Q 001400 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQND 911 (1085)
Q Consensus 834 ~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~ 911 (1085)
++++.+++..+|+||||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++
T Consensus 9 ~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~ 86 (303)
T TIGR01288 9 GVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPVPSRARLARVAIGVVPQFD 86 (303)
T ss_pred eEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcccHHHHhhcEEEEeccc
Confidence 33334455679999999999999999999999999999999999866 468999999987532 23467799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++.+|++||+.+.+..+. .......+.++++++.+++.+..+..+ ..||||||||++||+||+.+|++||
T Consensus 87 ~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lll 158 (303)
T TIGR01288 87 NLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGMKRRLTLARALINDPQLLI 158 (303)
T ss_pred cCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 98899999999986543321 122333445678899999887666543 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+++.|++++++|.|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 159 LDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 220 (303)
T TIGR01288 159 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGRPH 220 (303)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 99999999999999999999999878999999999987 57788999999985 7899888753
No 108
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-38 Score=308.35 Aligned_cols=201 Identities=25% Similarity=0.363 Sum_probs=173.5
Q ss_pred cceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCHHHHHH
Q 001400 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVRETLD 231 (1085)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1085)
.+++.|++||+++|+||||||||||||.++|...|. +|+|.+||.+.....| +|-+++++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 477899999999999999999999999999999876 9999999999876655 588999999999999999999998
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhh
Q 001400 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1085)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1085)
++.. ++-+.. ...+..++.++..+||..+.+.+.+ +|||||
T Consensus 94 LGl~---P~LkL~-------------------------------a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLS---PGLKLN-------------------------------AEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCC---cccccC-------------------------------HHHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 8642 111110 0113358899999999999887654 699999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEecC
Q 001400 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1085)
Q Consensus 312 kqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G~ 391 (1085)
||||++||+|+.+-+||+||||+|+||+.-+.++...+.+++.+.+.|++ +++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tll-mVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLL-MVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEE-EEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 99999999999999999999999999999999999999999887655554 46677789999999999999999999999
Q ss_pred hhhHH
Q 001400 392 RVSVL 396 (1085)
Q Consensus 392 ~~~~~ 396 (1085)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 87764
No 109
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-38 Score=337.56 Aligned_cols=205 Identities=27% Similarity=0.359 Sum_probs=172.7
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSP 915 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~ 915 (1085)
.+++..+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 9 ~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~ 86 (220)
T cd03265 9 KYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDD 86 (220)
T ss_pred EECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCcChHHHhhcEEEecCCccccc
Confidence 3345679999999999999999999999999999999999865 468999999986532 234567999999998889
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.+|++||+.+....+. ....+..+.++++++.+++.+..+... ..||+|||||++||+||+.+|++|+||||
T Consensus 87 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~la~al~~~p~llllDEP 158 (220)
T cd03265 87 ELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRRRLEIARSLVHRPEVLFLDEP 158 (220)
T ss_pred cCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999988654331 122333456788999999977655543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 159 t~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 159 TIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 9999999999999999999876 899999999986 47778999999985 688887764
No 110
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.9e-38 Score=361.09 Aligned_cols=224 Identities=27% Similarity=0.350 Sum_probs=184.1
Q ss_pred ccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccC
Q 001400 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQN 910 (1085)
Q Consensus 834 ~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~ 910 (1085)
++++.++++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+++.+||++|+
T Consensus 8 nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~ 85 (402)
T PRK09536 8 DLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVEALSARAASRRVASVPQD 85 (402)
T ss_pred eEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcCcCCHHHHhcceEEEccC
Confidence 33344566789999999999999999999999999999999999876 568999999987643 3456789999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 911 DIHSPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 911 ~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
+.+++.+||+||+.++...+.. .........+.++++++.+++.++.+..+ .+||+|||||+.|||||+++|+|
T Consensus 86 ~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSgGerQRv~IArAL~~~P~i 160 (402)
T PRK09536 86 TSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSGGERQRVLLARALAQATPV 160 (402)
T ss_pred CCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCE
Confidence 9988999999999876421110 01012334567899999999988777654 57999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC--chHHHHHHHH
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS--KSCELIKYFE 1066 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~--~~~~~~~~~~ 1066 (1085)
|||||||+|||+.++..++++|+++.++|.|||+++|+++ ++.+.||++++|++ |++++.|+..+ ....+.+.|.
T Consensus 161 LLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G~~~ev~~~~~l~~~~~ 237 (402)
T PRK09536 161 LLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAGPPADVLTADTLRAAFD 237 (402)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEecCHHHHhCcHHHHHHhC
Confidence 9999999999999999999999999877999999999987 47789999999985 78899987653 1223555554
No 111
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.3e-38 Score=324.21 Aligned_cols=234 Identities=23% Similarity=0.334 Sum_probs=203.8
Q ss_pred ccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEcc
Q 001400 830 VELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQ 909 (1085)
Q Consensus 830 ~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q 909 (1085)
++++++.+.++++.+++||||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+++.. ...+|||.|.
T Consensus 3 L~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPE 79 (300)
T COG4152 3 LEIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPE 79 (300)
T ss_pred eEEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChh
Confidence 345566677889999999999999999999999999999999999999877 5699999999987654 3567999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 910 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
+..+++.+||.|.|.|.|.+. .++.++....+..+|+.+++.....+.+ .+||-|++|++.+-.+++++|++
T Consensus 80 ERGLy~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeL 151 (300)
T COG4152 80 ERGLYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPEL 151 (300)
T ss_pred hhccCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCE
Confidence 999999999999999998876 4556677778899999999998877765 57999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc------------
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK------------ 1057 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~------------ 1057 (1085)
+|||||+|||||.+.+.+.+.+.+++++|.|||++||+++ .+-+.||++++|++ |+.|..|++...
T Consensus 152 lILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~~ir~~~Gkk~~~ie 229 (300)
T COG4152 152 LILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVEDIRRSFGKKRLVIE 229 (300)
T ss_pred EEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHHHHHHhcCCceEEEe
Confidence 9999999999999999999999999999999999999997 68899999999985 688888877431
Q ss_pred hHHHHHHHHhccccccCCc
Q 001400 1058 SCELIKYFEVESFMFKSPR 1076 (1085)
Q Consensus 1058 ~~~~~~~~~~~~g~~~~~~ 1076 (1085)
+..-.+-.+.+||+-++..
T Consensus 230 s~~s~eeL~~ipgi~~~~~ 248 (300)
T COG4152 230 SDLSLEELANIPGILKITE 248 (300)
T ss_pred ccCchHHHhcCCCceeeee
Confidence 2223345788899987663
No 112
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.2e-38 Score=360.53 Aligned_cols=206 Identities=26% Similarity=0.354 Sum_probs=178.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1085)
.++|+|+|+.+++|++++|+|||||||||||++|+|+++++ +|+|.++|.++....+ +|.++||+|++.+||++||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999876 9999999998865433 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.|+.+..+... .+.+.+++++++.+||++..+..+ ..
T Consensus 104 ~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRKP-----HQ 144 (375)
T ss_pred HHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999764322100 001234788999999998777654 57
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||+|||||+.+|++|+||||+++||..++.++.+.|+++.+..+ +++|.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g-~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLG-ITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999887544 5566688999999999999999999999
Q ss_pred EEecChhhHH
Q 001400 387 VYQGPRVSVL 396 (1085)
Q Consensus 387 v~~G~~~~~~ 396 (1085)
+..|+++++.
T Consensus 224 ~~~g~~~~i~ 233 (375)
T PRK09452 224 EQDGTPREIY 233 (375)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 113
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-38 Score=314.85 Aligned_cols=234 Identities=24% Similarity=0.358 Sum_probs=194.4
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~ 916 (1085)
.++++|++||++++|||++||+|||||||||||+.|+|... +.+|++.++|.+... ...++..+.++|+..+...
T Consensus 12 ~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFp 89 (259)
T COG4559 12 AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFP 89 (259)
T ss_pred ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChhhCCHHHHHHHhhhcccCcccccc
Confidence 56789999999999999999999999999999999999876 458999999998754 4567778999999988878
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhc------CCCEE
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA------NPSIV 990 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~------~p~il 990 (1085)
.||+|-+.++..-... .....+..+.++++|+..++.+++.... ..|||||||||.+||.|++ ++++|
T Consensus 90 Ftv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGEqQRVqlARvLaQl~~~v~~~r~L 163 (259)
T COG4559 90 FTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGEQQRVQLARVLAQLWPPVPSGRWL 163 (259)
T ss_pred eEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchHHHHHHHHHHHHHccCCCCCCceE
Confidence 8999999998532111 1112244556789999999998887654 4799999999999999975 34699
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC--chHHHHHHHHhc
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS--KSCELIKYFEVE 1068 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~--~~~~~~~~~~~~ 1068 (1085)
|||||||+||...+..++++.|+++++|..|++|-||++. ...+|||+++|+ +|+++..|+..+ ..+.+-..|..-
T Consensus 164 ~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~-~Grv~a~g~p~~vlt~Etl~~vyg~~ 241 (259)
T COG4559 164 FLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLH-QGRVIASGSPQDVLTDETLERVYGAD 241 (259)
T ss_pred EecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeee-CCeEeecCCHHHhcCHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999986 778999999998 579999998766 345666677654
Q ss_pred cccccCCccceeeee
Q 001400 1069 SFMFKSPRIFYCQIL 1083 (1085)
Q Consensus 1069 ~g~~~~~~~~~~~~~ 1083 (1085)
-.|.+-|.-..++|+
T Consensus 242 ~~V~~~P~~~~P~V~ 256 (259)
T COG4559 242 IRVGRHPARNIPLVL 256 (259)
T ss_pred eeeeeccCCCCCeee
Confidence 466677776766665
No 114
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-38 Score=334.33 Aligned_cols=201 Identities=24% Similarity=0.432 Sum_probs=169.8
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
+++..+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..++.++|++|++.+++.+|
T Consensus 10 ~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~t 86 (210)
T cd03269 10 FGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMK 86 (210)
T ss_pred ECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCc
Confidence 345679999999999999999999999999999999999865 468999999987643 34567999999998888999
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsg 998 (1085)
++||+.+....+. .......+.++++++.+++.+..+... .+||+|||||++||+||+.+|++|+|||||+|
T Consensus 87 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~~lllDEP~~~ 158 (210)
T cd03269 87 VIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKVQFIAAVIHDPELLILDEPFSG 158 (210)
T ss_pred HHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999987654332 122333456788999999876655433 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 999 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 159 LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 159 LDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999998777899999999986 46678999999985 6777653
No 115
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.1e-36 Score=367.54 Aligned_cols=215 Identities=27% Similarity=0.436 Sum_probs=174.2
Q ss_pred ccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcC
Q 001400 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1085)
Q Consensus 813 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g 892 (1085)
.+-.+.++|++|.++. .+..+|+|+|++|+|||.+||+|+||||||||+|+|.|... +..|+|.+||
T Consensus 468 ~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~dg 534 (709)
T COG2274 468 LQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILLDG 534 (709)
T ss_pred cCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECC
Confidence 3446888888887742 23479999999999999999999999999999999999877 5799999999
Q ss_pred ccCC---hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-------ccccccC
Q 001400 893 YPKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIG 962 (1085)
Q Consensus 893 ~~~~---~~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~ 962 (1085)
+++. ...+|+.+|||+|++.++.+ |++||+.++. | +.+ .+.+.++.+..+..+ -.+..++
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~g-SI~eNi~l~~----p-~~~----~e~i~~A~~~ag~~~fI~~lP~gy~t~v~ 604 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFSG-SIRENIALGN----P-EAT----DEEIIEAAQLAGAHEFIENLPMGYDTPVG 604 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhcC-cHHHHHhcCC----C-CCC----HHHHHHHHHHhCcHHHHHhcccccccccc
Confidence 9865 46789999999999988755 9999998753 2 111 122333333333322 1233344
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEE
Q 001400 963 LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1085)
Q Consensus 963 ~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l 1042 (1085)
.. +.+||||||||++|||||+++|+||+||||||+||+++++.|++.|.++. .|+|+|+++|+++ .++.||+++||
T Consensus 605 E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl 680 (709)
T COG2274 605 EG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVL 680 (709)
T ss_pred cC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEc
Confidence 33 45799999999999999999999999999999999999999999999974 6899999999985 67899999999
Q ss_pred ecCcEEEEecCCC
Q 001400 1043 KRGGELIYAGPLG 1055 (1085)
Q Consensus 1043 ~~gG~~~~~g~~~ 1055 (1085)
+ +|+++..|+-.
T Consensus 681 ~-~Gkiv~~gs~~ 692 (709)
T COG2274 681 D-QGKIVEQGSHE 692 (709)
T ss_pred c-CCceeccCCHH
Confidence 8 57999999853
No 116
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.5e-38 Score=358.49 Aligned_cols=204 Identities=24% Similarity=0.348 Sum_probs=176.9
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEccCCCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
++..+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...+|.+||++|++.++|.+|
T Consensus 25 ~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~lt 102 (375)
T PRK09452 25 DGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMT 102 (375)
T ss_pred CCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHCCEEEEecCcccCCCCC
Confidence 44679999999999999999999999999999999999876 568999999987643 223577999999999999999
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsg 998 (1085)
|+||+.|+...+. ....+..+.++++++.+++.++.+... .+|||||||||+|||||+.+|++|||||||++
T Consensus 103 v~eNi~~~l~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~ 174 (375)
T PRK09452 103 VFENVAFGLRMQK---TPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQQRVAIARAVVNKPKVLLLDESLSA 174 (375)
T ss_pred HHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCc
Confidence 9999998754331 233444566889999999988777653 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 999 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||+..+..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|+..
T Consensus 175 LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~~~ 230 (375)
T PRK09452 175 LDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGTPR 230 (375)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999999764 999999999986 57888999999985 7999888754
No 117
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.5e-38 Score=336.41 Aligned_cols=193 Identities=25% Similarity=0.325 Sum_probs=164.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~~~~ 915 (1085)
..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 469999999999999999999999999999999999866 468999999987532 124567999999999889
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.+||+||+.+....+. .......+.++++++.+++.+..+... .+||||||||++|||||+.+|++||||||
T Consensus 94 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP 165 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLSGGEQQRVAIARAIVHKPPLLLADEP 165 (216)
T ss_pred cccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999988654321 122334456788999999977665543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
|+|||+.++..+.+.|++++++|.|||++||+++ .+.+.||++++|++|
T Consensus 166 t~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 166 TGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999998777999999999986 466789999999864
No 118
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.9e-38 Score=338.87 Aligned_cols=206 Identities=24% Similarity=0.337 Sum_probs=172.9
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hc-ccceEEEEccCCCC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ET-FARISGYCEQNDIH 913 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~-~~~~~gy~~Q~~~~ 913 (1085)
.+++..+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+... .. .++.++|++|++.+
T Consensus 9 ~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~ 86 (232)
T cd03218 9 RYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITKLPMHKRARLGIGYLPQEASI 86 (232)
T ss_pred EeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccCCHhHHHhccEEEecCCccc
Confidence 3445679999999999999999999999999999999999876 468999999987532 12 23569999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
++.+|++||+.+....+. .........++++++.+++.+..+... ..||+|||||++|||||+.+|++|+||
T Consensus 87 ~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllD 158 (232)
T cd03218 87 FRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGERRRVEIARALATNPKFLLLD 158 (232)
T ss_pred cccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEec
Confidence 999999999987643221 122333456788999999876655543 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+|||+.+++.+.+.|+++.++|.|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 159 EPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 218 (232)
T cd03218 159 EPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGTPE 218 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeCHH
Confidence 999999999999999999998777999999999986 57888999999985 7888888754
No 119
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=354.71 Aligned_cols=210 Identities=27% Similarity=0.382 Sum_probs=177.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1085)
+.+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|+++|+++....+ ++.++||+|++.+++++||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999998876 9999999998765433 3679999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.|+.+......... . .+...+++++++.+||++..|..+ ..
T Consensus 92 ~eni~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRERPN------A------------------------AAIKAKVTQLLEMVQLAHLADRYP-----AQ 136 (353)
T ss_pred HHHHHhhhhhcccccCCC------H------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999754311000000 0 001234788999999988776554 56
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEEL-KFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 45566688999999999999999999999
Q ss_pred EEecChhhHH
Q 001400 387 VYQGPRVSVL 396 (1085)
Q Consensus 387 v~~G~~~~~~ 396 (1085)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 120
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-38 Score=333.33 Aligned_cols=207 Identities=27% Similarity=0.377 Sum_probs=180.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCC----CCCCCceEEEEccCC-CCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFK----EFVPPRTSAYVSQQD-WQVA 222 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 222 (1085)
..+|+|+|+.|++|+.++|+||||||||||+++|+|++.|. +|+|.++|.+.. ....++.+|||+|++ .++.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999886 899999999865 223468899999996 4577
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
.-||.|.++|+....+.... +...+++++++.+||.+.++..
T Consensus 94 ~~tV~~evafg~~n~g~~~~----------------------------------e~~~rv~~~l~~vgl~~~~~r~---- 135 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPRE----------------------------------EIEERVAEALELVGLEELLDRP---- 135 (235)
T ss_pred cCcHHHHHhhchhhcCCCHH----------------------------------HHHHHHHHHHHHcCchhhccCC----
Confidence 78999999999876653210 1234689999999999987754
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
+..|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++.+.. +.++|.++|+.+.+.+++|++++|+
T Consensus 136 -p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~-~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 136 -PFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEG-GKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred -ccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcC-CCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999998753 4556668899999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 001400 383 EGQIVYQGPRVSVLD 397 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1085)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877653
No 121
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.1e-37 Score=350.36 Aligned_cols=210 Identities=25% Similarity=0.360 Sum_probs=178.4
Q ss_pred ccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCC
Q 001400 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQND 911 (1085)
Q Consensus 834 ~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~ 911 (1085)
+.++.+++..+|+|+||++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++
T Consensus 7 ~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~ 84 (301)
T TIGR03522 7 SLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVLQNPKEVQRNIGYLPEHN 84 (301)
T ss_pred EEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccChHHHHhceEEecCCC
Confidence 33444456789999999999999999999999999999999999876 568999999987643 23466799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++.+|+.||+.+.+.++. ....+..+.++++++.+++.+..+..+ ..||+|||||++||+||+.+|++||
T Consensus 85 ~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lli 156 (301)
T TIGR03522 85 PLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYRQRVGLAQALIHDPKVLI 156 (301)
T ss_pred CCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999988765432 122333456789999999988776654 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|||||+|||+.++..+++.|++++ +++|||++||+++ ++.+.||++++|++ |++++.|+..+
T Consensus 157 LDEPt~gLD~~~~~~l~~~l~~~~-~~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~~~ 218 (301)
T TIGR03522 157 LDEPTTGLDPNQLVEIRNVIKNIG-KDKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKLDE 218 (301)
T ss_pred EcCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCHHH
Confidence 999999999999999999999986 4799999999986 57788999999985 79999888653
No 122
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-37 Score=338.32 Aligned_cols=207 Identities=29% Similarity=0.381 Sum_probs=171.9
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh---c-ccceEEEEccCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHS 914 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gy~~Q~~~~~ 914 (1085)
+++..+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.++
T Consensus 10 ~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~ 87 (236)
T cd03219 10 FGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLF 87 (236)
T ss_pred ECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccc
Confidence 344679999999999999999999999999999999999866 4689999999876431 2 235699999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCc-------ccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 915 PGLTVLESLLFSAWLRLPSE-------IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
+.+||+||+.+......... .......+.++++++.+++.+..+... ..||||||||++|||||+.+|
T Consensus 88 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p 162 (236)
T cd03219 88 PELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA-----GELSYGQQRRLEIARALATDP 162 (236)
T ss_pred cCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987653321110 012333456788999999876655543 579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |+++..|+.
T Consensus 163 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (236)
T cd03219 163 KLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-GRVIAEGTP 227 (236)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEeecCH
Confidence 999999999999999999999999998777999999999987 46778999999985 688888764
No 123
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-38 Score=320.59 Aligned_cols=213 Identities=27% Similarity=0.377 Sum_probs=177.1
Q ss_pred cccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEE
Q 001400 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGY 906 (1085)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy 906 (1085)
+++++...|++.++|++|||++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.+++. +..++.++|
T Consensus 5 ~v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit~~p~~~r~r~Gi~~ 82 (237)
T COG0410 5 EVENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDITGLPPHERARLGIAY 82 (237)
T ss_pred eEEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecCCCCHHHHHhCCeEe
Confidence 44556667888999999999999999999999999999999999999876 458999999998753 345677999
Q ss_pred EccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcC-CCcccccccCCCCCCCCCHHHHHHHHHHHHHhc
Q 001400 907 CEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-LTSLSGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1085)
Q Consensus 907 ~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~ 985 (1085)
|||....||.+||+|||..++..+... ......++++.+++- |.+.++... ..|||||||.|+|||||+.
T Consensus 83 VPegR~iF~~LTVeENL~~g~~~~~~~----~~~~~~~e~v~~lFP~Lker~~~~a-----G~LSGGEQQMLAiaRALm~ 153 (237)
T COG0410 83 VPEGRRIFPRLTVEENLLLGAYARRDK----EAQERDLEEVYELFPRLKERRNQRA-----GTLSGGEQQMLAIARALMS 153 (237)
T ss_pred CcccccchhhCcHHHHHhhhhhccccc----ccccccHHHHHHHChhHHHHhcCcc-----cCCChHHHHHHHHHHHHhc
Confidence 999999999999999999886544221 111122566666653 333444433 4799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 986 ~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
+|++|+|||||.||-|.-.+.|.++|+++.++ |.||+++-++... ..+.+||.++|.+ |++++.|+..+
T Consensus 154 ~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~-Al~iaDr~yvle~-Griv~~G~~~e 223 (237)
T COG0410 154 RPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARF-ALEIADRGYVLEN-GRIVLSGTAAE 223 (237)
T ss_pred CCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHH-HHHhhCEEEEEeC-CEEEEecCHHH
Confidence 99999999999999999999999999999866 7799999998764 7788999999985 79999998654
No 124
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-37 Score=357.72 Aligned_cols=206 Identities=27% Similarity=0.376 Sum_probs=176.3
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEccCCCCCCC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q~~~~~~~ 916 (1085)
.+++..+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.
T Consensus 12 ~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~ 89 (369)
T PRK11000 12 AYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRMNDVPPAERGVGMVFQSYALYPH 89 (369)
T ss_pred EeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHhHCCEEEEeCCcccCCC
Confidence 3455679999999999999999999999999999999999876 468999999987643 1234679999999999999
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
+||+||+.|+...+. ....+..+.++++++.+++.+..+... .+|||||||||+|||||+.+|++|||||||
T Consensus 90 ~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~QRvaLAraL~~~P~lLLLDEPt 161 (369)
T PRK11000 90 LSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQRQRVAIGRTLVAEPSVFLLDEPL 161 (369)
T ss_pred CCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999998754332 223344567889999999987766543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||+.++..+.+.|+++.++ |.|||++|||++ ++...+|++++|++ |+++..|+..
T Consensus 162 s~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~~~ 219 (369)
T PRK11000 162 SNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGKPL 219 (369)
T ss_pred ccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 999999999999999998764 899999999986 57788999999985 7899888754
No 125
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.2e-37 Score=334.89 Aligned_cols=198 Identities=28% Similarity=0.428 Sum_probs=169.0
Q ss_pred EEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCCCCHH
Q 001400 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTVL 920 (1085)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~~tv~ 920 (1085)
.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++.+|++
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 69999999999999999999999999999999999866 468999999987642 23467799999999888889999
Q ss_pred HHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCC
Q 001400 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1085)
Q Consensus 921 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD 1000 (1085)
||+.+....+. .......+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||+|||
T Consensus 97 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 97 ENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 99987543321 222334456788999999977666543 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 1001 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 99999999999999777999999999986 47778999999985 6777643
No 126
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-37 Score=338.15 Aligned_cols=208 Identities=27% Similarity=0.374 Sum_probs=171.8
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh-cccceEEEEccCCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGL 917 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gy~~Q~~~~~~~~ 917 (1085)
+++..+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++.+++..
T Consensus 12 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~ 89 (239)
T cd03296 12 FGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDATDVPVQERNVGFVFQHYALFRHM 89 (239)
T ss_pred ECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCccccceEEEecCCcccCCC
Confidence 345679999999999999999999999999999999999866 4689999999875432 2245799999999888899
Q ss_pred CHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 918 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
||+||+.+....+.. .........+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||
T Consensus 90 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP~ 164 (239)
T cd03296 90 TVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEPF 164 (239)
T ss_pred CHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999876432211 00112233455788899999876655543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 165 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 222 (239)
T cd03296 165 GALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGTPD 222 (239)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecCHH
Confidence 999999999999999999765 899999999986 46778999999985 7888888753
No 127
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=356.51 Aligned_cols=204 Identities=25% Similarity=0.365 Sum_probs=176.9
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEccCCCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
++..+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...+|.+||++|++.++|.+|
T Consensus 30 ~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~lt 107 (377)
T PRK11607 30 DGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMT 107 (377)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCC
Confidence 44679999999999999999999999999999999999876 568999999987643 235678999999999999999
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsg 998 (1085)
|.||+.|+...+. ....+..+.++++++.+++.++.+... .+|||||||||+|||||+.+|++|+|||||++
T Consensus 108 v~eNi~~~l~~~~---~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~ 179 (377)
T PRK11607 108 VEQNIAFGLKQDK---LPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQRQRVALARSLAKRPKLLLLDEPMGA 179 (377)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999998754331 233445567889999999987776653 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 999 LDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 999 LD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||+.++..+.+.|+++.+ .|.|+|++|||++ ++...+|++++|++ |+++..|+..
T Consensus 180 LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~~~ 235 (377)
T PRK11607 180 LDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGEPE 235 (377)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcCHH
Confidence 999999999999999865 4899999999986 57889999999985 7999998754
No 128
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.7e-37 Score=332.57 Aligned_cols=201 Identities=27% Similarity=0.389 Sum_probs=169.0
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh-cccceEEEEccCCCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gy~~Q~~~~~~~~t 918 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++..|
T Consensus 11 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (213)
T cd03301 11 GNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMT 88 (213)
T ss_pred CCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCcccceEEEEecChhhccCCC
Confidence 44579999999999999999999999999999999999865 4689999999876432 22457999999998888899
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsg 998 (1085)
++||+.+....+. ....+..+.++++++.+++.+..+..+ ..||+|||||++|||||+.+|++|+|||||+|
T Consensus 89 v~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~ 160 (213)
T cd03301 89 VYDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSN 160 (213)
T ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999987643221 122334456788899999876665543 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 999 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
||+.++..+++.|++++++ |.|||++||+++ ++...+|++++|++ |++++.|
T Consensus 161 LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 161 LDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 9999999999999999764 899999999986 46778999999985 6887765
No 129
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.9e-38 Score=306.82 Aligned_cols=197 Identities=28% Similarity=0.363 Sum_probs=172.8
Q ss_pred eeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHHHHHHH
Q 001400 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLESLLF 925 (1085)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q~~~~~~~~tv~e~l~~ 925 (1085)
..+++|.+||++||+||||||||||+++|+|... +.+|+|.|+|.+... ....|-+++++|+.++|..+||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 5677899999999999999999999999999887 569999999998654 3456778999999999999999999988
Q ss_pred hhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHH
Q 001400 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1085)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~ 1005 (1085)
+.. |.-.-..+.++.++.+...+|+.++.+.+. .+||||||||+++||+|+++-+|++||||+|+|||.-+.
T Consensus 95 Gl~---P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLS---PGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCC---cccccCHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 743 211123456677899999999998887764 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 1006 IVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 1006 ~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
.+..++.++++ ++.|++++||+|+ +....+|+++++++ |+|.+.|+..
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~~ 215 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGSTQ 215 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccHH
Confidence 99999999985 5999999999998 78999999999985 7999999864
No 130
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=354.14 Aligned_cols=203 Identities=26% Similarity=0.337 Sum_probs=173.5
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~~~ 914 (1085)
+..+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 17 ~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 17 TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 3579999999999999999999999999999999999876 468999999987642 12356799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+.+||+||+.+....+. .......+.++++++.+++.+..+... .+||||||||++|||||+.+|+||||||
T Consensus 95 ~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~qRv~lAraL~~~p~iLlLDE 166 (343)
T PRK11153 95 SSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLSGGQKQRVAIARALASNPKVLLCDE 166 (343)
T ss_pred CCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 99999999988754331 223334456788999999987666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 167 Pts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~~~g~~~ 226 (343)
T PRK11153 167 ATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLVEQGTVS 226 (343)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 99999999999999999999764 899999999986 47778999999985 7899888754
No 131
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.5e-38 Score=332.25 Aligned_cols=192 Identities=28% Similarity=0.387 Sum_probs=162.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCC-CCCCCCHH
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI-HSPGLTVL 920 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~-~~~~~tv~ 920 (1085)
..+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.....++.+||++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 579999999999999999999999999999999999876 568999999987654445667999999974 33467999
Q ss_pred HHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCC
Q 001400 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1085)
Q Consensus 921 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD 1000 (1085)
||+.+...... .....++++++.+++.+..+..+ ..||+|||||++|||||+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKELD-------AGNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhcC-------ccHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 99987543211 01245788999999987666543 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 001400 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1085)
Q Consensus 1001 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~ 1049 (1085)
+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999986 46678999999986 5653
No 132
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.3e-36 Score=350.71 Aligned_cols=215 Identities=26% Similarity=0.430 Sum_probs=176.6
Q ss_pred ceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCcc
Q 001400 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1085)
Q Consensus 815 ~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 894 (1085)
-.+.|+|++|.++.. ++.++|+|+||+|+|||.+|||||||+||||+.++|.+... |.+|+|.+||+|
T Consensus 464 G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~~ 531 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGVP 531 (716)
T ss_pred ceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCee
Confidence 368888988888643 46789999999999999999999999999999999998766 679999999999
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHH-----HHHHHHHHHHHcCCCcccccccCCCCC
Q 001400 895 KRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELET-----QRAFVEEVMELVELTSLSGALIGLPGI 966 (1085)
Q Consensus 895 ~~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~~~ 966 (1085)
+++ ..+++++|+|.|+|.+|.. ||+||+.|+.. ....++ +.+.+.+.+. ++.+-.+..+|..|
T Consensus 532 i~~~~~~~lr~~Ig~V~QEPvLFs~-sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~--~~p~gY~T~VGEkG- 602 (716)
T KOG0058|consen 532 ISDINHKYLRRKIGLVGQEPVLFSG-SIRENIAYGLD-----NATDEEIEAAAKMANAHEFIT--NFPDGYNTVVGEKG- 602 (716)
T ss_pred hhhcCHHHHHHHeeeeeccceeecc-cHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHH--hCccccccccCCcc-
Confidence 764 4578899999999999865 99999999853 112111 1112222222 34445566666554
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCc
Q 001400 967 NGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGG 1046 (1085)
Q Consensus 967 ~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG 1046 (1085)
.+||||||||++|||||++||.||||||+||+||+++...|+++|.++. +++|||+|+|+++ ..+.+|+|+++++ |
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~-~~rTVlvIAHRLS--TV~~Ad~Ivvi~~-G 678 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLM-QGRTVLVIAHRLS--TVRHADQIVVIDK-G 678 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhh-cCCeEEEEehhhh--HhhhccEEEEEcC-C
Confidence 4799999999999999999999999999999999999999999999876 4699999999976 6788999999985 7
Q ss_pred EEEEecCC
Q 001400 1047 ELIYAGPL 1054 (1085)
Q Consensus 1047 ~~~~~g~~ 1054 (1085)
++++.|.-
T Consensus 679 ~V~E~G~h 686 (716)
T KOG0058|consen 679 RVVEMGTH 686 (716)
T ss_pred eEEecccH
Confidence 99998853
No 133
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.4e-37 Score=331.77 Aligned_cols=198 Identities=27% Similarity=0.408 Sum_probs=168.2
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEccCCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGL 917 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q~~~~~~~~ 917 (1085)
+++..+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++..
T Consensus 10 ~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 87 (208)
T cd03268 10 YGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNL 87 (208)
T ss_pred ECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccC
Confidence 345679999999999999999999999999999999999866 568999999987543 23456799999999888899
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
|++||+.+....+. . ..+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||+
T Consensus 88 tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~ 155 (208)
T cd03268 88 TARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTN 155 (208)
T ss_pred cHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcc
Confidence 99999987643221 1 1245678899999977665543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
|||+.++..+++.|+++.++|+|||++||+++ .+.+.+|++++|++ |++++.|
T Consensus 156 ~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 156 GLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999998777899999999986 46678999999985 6887654
No 134
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.8e-37 Score=335.65 Aligned_cols=206 Identities=25% Similarity=0.308 Sum_probs=170.0
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCC-----CCCeeeeEEEEcCccCCh-----hcccceEEEEc
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK-----TGGIIEGDIYISGYPKRQ-----ETFARISGYCE 908 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~-----~~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~ 908 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|.. . +.+|+|.++|.++.. ..+++.+||++
T Consensus 10 ~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~ 87 (227)
T cd03260 10 YGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVF 87 (227)
T ss_pred cCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEe
Confidence 34557999999999999999999999999999999999976 4 568999999987532 23456799999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 001400 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1085)
Q Consensus 909 Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ 988 (1085)
|++.++ .+||+||+.+....+.. .......+.++++++.+++.+..+... .+.+||||||||++|||||+.+|+
T Consensus 88 q~~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~---~~~~LSgG~~qrv~la~al~~~p~ 161 (227)
T cd03260 88 QKPNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRL---HALGLSGGQQQRLCLARALANEPE 161 (227)
T ss_pred cCchhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccC---CcccCCHHHHHHHHHHHHHhcCCC
Confidence 998887 79999999876433211 111223456788999999876554431 025799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 989 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||||||+|||+.++..+++.|++++++ .|||++||+++ .+.+.||++++|++ |++++.|+..
T Consensus 162 llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 225 (227)
T cd03260 162 VLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GRLVEFGPTE 225 (227)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEecCcc
Confidence 99999999999999999999999999776 99999999986 46778999999985 6888888753
No 135
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-37 Score=339.30 Aligned_cols=205 Identities=28% Similarity=0.376 Sum_probs=169.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~~~~ 915 (1085)
..+|+|+||+|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 579999999999999999999999999999999999865 468999999987542 234567999999998888
Q ss_pred CCCHHHHHHHhhhhc-----CCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 916 GLTVLESLLFSAWLR-----LPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
.+||+||+.+..... ...........+.+.++++.+++.+..+.. +.+||+|||||++|||||+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 899999998753210 000111123345677889999987665543 3579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||||+|||+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |++++.|+..
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 230 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPPA 230 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCHH
Confidence 999999999999999999999998764 899999999987 47778999999985 7888888753
No 136
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.8e-37 Score=333.63 Aligned_cols=192 Identities=31% Similarity=0.449 Sum_probs=163.1
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh------c-ccceEEEEccCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------T-FARISGYCEQNDIHS 914 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~-~~~~~gy~~Q~~~~~ 914 (1085)
..+|+|+||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 579999999999999999999999999999999999876 4689999999875421 1 245799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+.+|++||+.+....+. .......+.++++++.+++.+..+... ..||+|||||++|||||+.+|+||||||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999988654332 122233456788999999977665543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
||+|||+.++..+.+.|+++.+ .|+|||++||+++. + +.||++++|++|
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~G 216 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRDG 216 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeCC
Confidence 9999999999999999999976 58999999999863 4 489999999864
No 137
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-37 Score=336.10 Aligned_cols=206 Identities=25% Similarity=0.353 Sum_probs=172.4
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1085)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++||+|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 46999999999999999999999999999999999998876 999999998875432 245799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||+||+.++......... ......++++++.+||.+..++.+
T Consensus 90 ~~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (235)
T cd03261 90 DSLTVFENVAFPLREHTRLSE---------------------------------EEIREIVLEKLEAVGLRGAEDLYP-- 134 (235)
T ss_pred CCCcHHHHHHHHHhhccCCCH---------------------------------HHHHHHHHHHHHHcCCchhhcCCh--
Confidence 999999999886432100000 001123677899999987666655
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..++|+|++|
T Consensus 135 ---~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 135 ---AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKEL-GLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhcCEEEEE
Confidence 4699999999999999999999999999999999999999999999987533 455666889999999999999999
Q ss_pred cCCeEEEecChhhH
Q 001400 382 SEGQIVYQGPRVSV 395 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1085)
++|++++.|+.+++
T Consensus 211 ~~G~i~~~g~~~~~ 224 (235)
T cd03261 211 YDGKIVAEGTPEEL 224 (235)
T ss_pred ECCeEEEecCHHHH
Confidence 99999999988765
No 138
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-37 Score=335.46 Aligned_cols=200 Identities=27% Similarity=0.348 Sum_probs=170.3
Q ss_pred EEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh------cccceEEEEccCCCCCCC
Q 001400 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gy~~Q~~~~~~~ 916 (1085)
.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 79999999999999999999999999999999999876 4689999999876421 235679999999999999
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
+|++||+.+....+. .......+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999987643321 122333456788999999977665543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
+|||+.++..+.+.|+++.++ |+|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 225 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVVEEGTV 225 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999998765 899999999986 46778999999985 788888764
No 139
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=355.53 Aligned_cols=206 Identities=21% Similarity=0.301 Sum_probs=178.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1085)
..+|+|+|+.+++|++++|+|||||||||||++|+|+.+++ +|+|.++|.++....+ +|.++||+|++.+||++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999876 9999999998765433 5789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
.||+.|+.+..+... .+...+++++++.+||.+..+..+ .+
T Consensus 109 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~~-----~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRKP-----HQ 149 (377)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999999765322100 001234788999999987766554 57
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||+|||||+.+|++|+|||||++||..++.++.+.|+++.+..+ .+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999998876554 5566688999999999999999999999
Q ss_pred EEecChhhHH
Q 001400 387 VYQGPRVSVL 396 (1085)
Q Consensus 387 v~~G~~~~~~ 396 (1085)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 140
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.6e-37 Score=349.60 Aligned_cols=206 Identities=27% Similarity=0.387 Sum_probs=176.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1085)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999876 999999998875321 2457999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.|.++..+... .....+++++++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998655432110 0011247789999999987777654
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++. +++|+.++|..+++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~--g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE--GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999998753 4566668899999999999999999999
Q ss_pred EEEecChhhHHH
Q 001400 386 IVYQGPRVSVLD 397 (1085)
Q Consensus 386 iv~~G~~~~~~~ 397 (1085)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999888754
No 141
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-37 Score=350.98 Aligned_cols=206 Identities=24% Similarity=0.368 Sum_probs=175.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC------CceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 221 (1085)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999876 9999999998765321 46799999999989
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||+||+.|.....+... .+...+++++++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998654322100 001124778899999988777654
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
+.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999987643 455666889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988774
No 142
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=316.75 Aligned_cols=206 Identities=26% Similarity=0.384 Sum_probs=171.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
.++|+|||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|.+++...+ ++-++||||....|+.
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 68999999999999999999999999999999999998875 9999999999987755 3678999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhC-CcccccccccCc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-LDTCADTLVGDE 302 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 302 (1085)
|||+|||..++........ . ...+|.+.+.|= |..-.+..-|
T Consensus 93 LTVeENL~~g~~~~~~~~~-----------------~------------------~~~~e~v~~lFP~Lker~~~~aG-- 135 (237)
T COG0410 93 LTVEENLLLGAYARRDKEA-----------------Q------------------ERDLEEVYELFPRLKERRNQRAG-- 135 (237)
T ss_pred CcHHHHHhhhhhccccccc-----------------c------------------cccHHHHHHHChhHHHHhcCccc--
Confidence 9999999987543211000 0 000233333332 3333444433
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
+|||||+|-++|||||+++|++|+|||||.||-|.-..+|++.++++.+.. +.+|+.+.|+...+.+++||.++|.
T Consensus 136 ---~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~-g~tIlLVEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 136 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEG-GMTILLVEQNARFALEIADRGYVLE 211 (237)
T ss_pred ---CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcC-CcEEEEEeccHHHHHHhhCEEEEEe
Confidence 599999999999999999999999999999999999999999999998653 4677789999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 001400 383 EGQIVYQGPRVSVLD 397 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1085)
+|++++.|+.+++.+
T Consensus 212 ~Griv~~G~~~eL~~ 226 (237)
T COG0410 212 NGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999988853
No 143
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-37 Score=343.26 Aligned_cols=202 Identities=24% Similarity=0.342 Sum_probs=169.7
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-----hcccceEEEEccCCC-CCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HSP 915 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~-~~~ 915 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++. .+.
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 97 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLF 97 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECCCcCccHHHHhhceEEEecCchhccc
Confidence 469999999999999999999999999999999999876 568999999988643 245678999999874 334
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC--cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT--SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
..||+||+.|+.... .....+..+.++++++.+++. +..+.. +..||||||||++|||||+.+|++||||
T Consensus 98 ~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~LSgGq~qrv~iAraL~~~P~llllD 169 (287)
T PRK13637 98 EETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFELSGGQKRRVAIAGVVAMEPKILILD 169 (287)
T ss_pred cccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 579999999865332 223344456688999999996 444443 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+|||+.++..+++.|++++++ |.|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 170 EPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~i~~~g~~~ 230 (287)
T PRK13637 170 EPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GKCELQGTPR 230 (287)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999765 899999999986 46678999999985 7888888754
No 144
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-37 Score=336.78 Aligned_cols=203 Identities=26% Similarity=0.343 Sum_probs=170.8
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
+++..+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+... ..+.+||++|++.+++..|
T Consensus 11 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~t 86 (255)
T PRK11248 11 YGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRN 86 (255)
T ss_pred eCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCC--CCCcEEEEeCCCccCCCCc
Confidence 345679999999999999999999999999999999999865 468999999987643 2345899999998888899
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsg 998 (1085)
++||+.+....+. .......+.++++++.+++.+..+.. +..||||||||++|||||+.+|++|||||||+|
T Consensus 87 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qrl~laral~~~p~lllLDEPt~~ 158 (255)
T PRK11248 87 VQDNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQRVGIARALAANPQLLLLDEPFGA 158 (255)
T ss_pred HHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 9999987643221 22233345678899999997665543 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEec-CcEEEEecCC
Q 001400 999 LDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 1054 (1085)
Q Consensus 999 LD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~-gG~~~~~g~~ 1054 (1085)
||+.++..+.+.|+++++ .|+|||++||+++ .+...||++++|++ +|+++..++.
T Consensus 159 LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 159 LDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999854 5899999999987 47788999999985 5899888754
No 145
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3e-37 Score=330.78 Aligned_cols=194 Identities=26% Similarity=0.342 Sum_probs=164.4
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~~~ 914 (1085)
+..+|+|+||+|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.++
T Consensus 14 ~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 14 GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 3569999999999999999999999999999999999865 468999999987642 12456799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+..|+.||+.+....+. .......+.++++++.+++.+..+..+ ..||+|||||++|||||+.+|++|||||
T Consensus 92 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~lllLDE 163 (214)
T TIGR02673 92 PDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLSGGEQQRVAIARAIVNSPPLLLADE 163 (214)
T ss_pred cCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 89999999988643321 122333456788999999876555433 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
||+|||+.++..+.+.|+++.++|+|||++||+++ ++...||++++|++|
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 164 PTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999998777999999999986 477789999999864
No 146
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.1e-37 Score=334.89 Aligned_cols=205 Identities=25% Similarity=0.373 Sum_probs=172.6
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-----hcccceEEEEccCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~~~ 914 (1085)
++..+|+|+||++++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++.++
T Consensus 12 ~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 89 (240)
T PRK09493 12 GPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLF 89 (240)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChhHHHHhhceEEEecccccC
Confidence 44679999999999999999999999999999999999865 568999999987642 23456799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+.+||+||+.+...... ........+.+.++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||
T Consensus 90 ~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDE 162 (240)
T PRK09493 90 PHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSGGQQQRVAIARALAVKPKLMLFDE 162 (240)
T ss_pred CCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 89999999987532111 1222334456788999999876655543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 163 P~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 221 (240)
T PRK09493 163 PTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAEDGDPQ 221 (240)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeCCHH
Confidence 99999999999999999998777999999999986 46678999999985 7899888754
No 147
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-37 Score=331.55 Aligned_cols=200 Identities=28% Similarity=0.400 Sum_probs=167.6
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh------cc-cceEEEEccCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TF-ARISGYCEQNDIHS 914 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~-~~~~gy~~Q~~~~~ 914 (1085)
..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++... .+ ++.++|++|++.++
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~ 99 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLL 99 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccC
Confidence 469999999999999999999999999999999999866 5689999999876431 12 25699999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+.+|++||+.+....+. ......++.++++++.+++.+..+... .+||||||||++|||||+.+|+||||||
T Consensus 100 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDE 171 (233)
T PRK11629 100 PDFTALENVAMPLLIGK---KKPAEINSRALEMLAAVGLEHRANHRP-----SELSGGERQRVAIARALVNNPRLVLADE 171 (233)
T ss_pred CCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 89999999988643221 122334456788999999977655543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
||+|||+.++..+.+.|+++++ .|.|||++||+++. + +.+|++++|++ |+++..+++
T Consensus 172 Pt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~-~-~~~~~~~~l~~-G~i~~~~~~ 229 (233)
T PRK11629 172 PTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL-A-KRMSRQLEMRD-GRLTAELSL 229 (233)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HhhCEEEEEEC-CEEEEEecc
Confidence 9999999999999999999875 58999999999863 4 45689999974 789888875
No 148
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-37 Score=339.50 Aligned_cols=211 Identities=23% Similarity=0.271 Sum_probs=176.1
Q ss_pred cccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hc----ccceEE
Q 001400 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ET----FARISG 905 (1085)
Q Consensus 833 ~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~----~~~~~g 905 (1085)
++..+.+++..+|+|+||+|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. .. .++.+|
T Consensus 28 ~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~ 105 (269)
T cd03294 28 EEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKIS 105 (269)
T ss_pred hhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEE
Confidence 345556677889999999999999999999999999999999999876 468999999987542 11 235799
Q ss_pred EEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhc
Q 001400 906 YCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1085)
Q Consensus 906 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~ 985 (1085)
|++|++.+++.+|++||+.+...... .......+.++++++.+++.+..+..+ .+||+|||||++|||||+.
T Consensus 106 ~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~ 177 (269)
T cd03294 106 MVFQSFALLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAV 177 (269)
T ss_pred EEecCcccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhc
Confidence 99999998889999999987643221 122333456788999999977666543 4799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 986 ~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|+||||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 178 ~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~~ 246 (269)
T cd03294 178 DPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTPE 246 (269)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999999999998754 899999999986 46788999999985 7888888754
No 149
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.2e-37 Score=337.35 Aligned_cols=206 Identities=27% Similarity=0.338 Sum_probs=169.7
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~~~ 914 (1085)
+..+|+|+||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 14 ~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 14 GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 4569999999999999999999999999999999999876 468999999987542 12456799999999888
Q ss_pred CCCCHHHHHHHhhhhcC-----CCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 915 PGLTVLESLLFSAWLRL-----PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
+.+|++||+.+...... ..........+.+.++++.+++.+..+.. +..||||||||++|||||+.+|++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~l 166 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR-----ADQLSGGQQQRVAIARALAQQPDL 166 (243)
T ss_pred ccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 89999999976431100 00011123345678889999987665543 357999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ .+.+.||++++|++ |++++.|+..
T Consensus 167 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 231 (243)
T TIGR02315 167 ILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA-GEIVFDGAPS 231 (243)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecCCHH
Confidence 9999999999999999999999998764 899999999986 46678999999985 7888888754
No 150
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-37 Score=353.90 Aligned_cols=206 Identities=25% Similarity=0.388 Sum_probs=176.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1085)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 36999999999999999999999999999999999998876 9999999998765432 4679999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.|+.+..+... .+...+++++++.+||++..++.+ ..
T Consensus 93 ~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KA 133 (369)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hh
Confidence 999998754322100 001224788899999988777655 46
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 44566688999999999999999999999
Q ss_pred EEecChhhHH
Q 001400 387 VYQGPRVSVL 396 (1085)
Q Consensus 387 v~~G~~~~~~ 396 (1085)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999988774
No 151
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5e-37 Score=330.58 Aligned_cols=200 Identities=30% Similarity=0.448 Sum_probs=169.3
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 919 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~~tv 919 (1085)
..+|+||||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++..|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 579999999999999999999999999999999999866 468999999987642 2345679999999988889999
Q ss_pred HHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Q 001400 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1085)
Q Consensus 920 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgL 999 (1085)
+||+.+....+. .......+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999987654331 122233455788999999876655543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 1000 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|+.++..+.+.|+++++ ++|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999865 699999999986 46678999999985 688888764
No 152
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.3e-37 Score=336.39 Aligned_cols=206 Identities=27% Similarity=0.366 Sum_probs=171.8
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-----------hcccceEEEE
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----------ETFARISGYC 907 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----------~~~~~~~gy~ 907 (1085)
+++..+|+|+||+|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|+
T Consensus 13 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v 90 (250)
T PRK11264 13 FHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFV 90 (250)
T ss_pred ECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccccccchhhHHHHhhhhEEEE
Confidence 344579999999999999999999999999999999999866 468999999987532 2345679999
Q ss_pred ccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 908 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 908 ~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
+|++.+++..|++||+.+...... ........+.++++++.+++.+..+.. +..||+|||||++|||||+.+|
T Consensus 91 ~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~Gq~qrv~la~al~~~p 163 (250)
T PRK11264 91 FQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY-----PRRLSGGQQQRVAIARALAMRP 163 (250)
T ss_pred ecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----hhhCChHHHHHHHHHHHHhcCC
Confidence 999988889999999987532111 112233445678889999987665543 3579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
++|||||||+|||+.++..+++.|+++.++|.|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 164 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 229 (250)
T PRK11264 164 EVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ-GRIVEQGPAK 229 (250)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999999999999999877999999999986 46778999999985 7888888753
No 153
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=5e-37 Score=331.12 Aligned_cols=202 Identities=28% Similarity=0.409 Sum_probs=167.0
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh---c-ccceEEEEccCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHS 914 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gy~~Q~~~~~ 914 (1085)
+++..+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.++
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 87 (222)
T cd03224 10 YGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIF 87 (222)
T ss_pred cCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccC
Confidence 345679999999999999999999999999999999999876 4689999999875421 1 245699999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
+.+|++||+.+....+. .......+.++++.+ ++.+..+.. +..||+|||||++|||||+.+|++|+||
T Consensus 88 ~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllD 157 (222)
T cd03224 88 PELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLD 157 (222)
T ss_pred CCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 99999999987653321 112233456677776 455444433 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|||+|||+.++..+++.|++++++|+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 158 EPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 158 EPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 999999999999999999998777899999999986 46788999999985 788888764
No 154
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-37 Score=334.59 Aligned_cols=202 Identities=28% Similarity=0.404 Sum_probs=170.8
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
..+|+|+||+|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 569999999999999999999999999999999999866 468999999987542 234567999999999999999
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS--LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
++||+.+....+. .......+.++++++.+++.+ ..+.. +.+||+|||||++|||||+.+|++|||||||
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999987643321 122334456788999999875 44443 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 221 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTPD 221 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999764 899999999986 47788999999985 7888888753
No 155
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.8e-37 Score=329.70 Aligned_cols=202 Identities=27% Similarity=0.427 Sum_probs=164.3
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCC--CC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PG 916 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~--~~ 916 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++. ..++.++|++|++.+. +.
T Consensus 9 ~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~ 84 (213)
T cd03235 9 YGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFP 84 (213)
T ss_pred ECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCC
Confidence 344679999999999999999999999999999999999865 46899999998653 3456799999998763 34
Q ss_pred CCHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 917 LTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.|++||+.+....... .........+.++++++.+++.+..+... ..||||||||++|||||+.+|++||||||
T Consensus 85 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEP 159 (213)
T cd03235 85 ISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEP 159 (213)
T ss_pred CcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 7999999875322110 00111223456788999999876655443 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
|+|||+.++..+.+.|++++++|.|||++||+++ ++.+.+|++++|++ | +++.|
T Consensus 160 t~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 160 FAGVDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999998777899999999986 46778999999974 4 55543
No 156
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.2e-37 Score=346.88 Aligned_cols=229 Identities=24% Similarity=0.373 Sum_probs=186.8
Q ss_pred cCCCCCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeecccceeeEeCCeEEEEeCCCCC
Q 001400 93 VDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSS 172 (1085)
Q Consensus 93 ~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 172 (1085)
..+..|.=.|+|+|++.+-. ++++||+++||+|++|+.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 46667777899999986531 234599999999999999999999999
Q ss_pred ChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHH
Q 001400 173 GKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITEL 249 (1085)
Q Consensus 173 GKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 249 (1085)
||||+|++|.+.++ + +|+|.+||.++++..+ ++.||||||+..+|.+ ||.+||.++.. ...++.+.+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn~----sas~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGNP----SASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCCC----CcCHHHHHHH
Confidence 99999999999987 4 9999999999887653 6889999999987765 99999999742 2233444455
Q ss_pred HHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhhhhHHHHHHHHhCCCcEeE
Q 001400 250 ARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLF 329 (1085)
Q Consensus 250 ~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vll 329 (1085)
|++- ++ .|. ...|++.++|.||+++. -|||||||||++|||++.+|+|++
T Consensus 461 ~k~a---~~-----------------------hd~---i~~l~~GY~T~VGerG~-~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRA---GL-----------------------HDV---ISRLPDGYQTLVGERGL-MLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHc---Cc-----------------------HHH---HHhccccchhhHhhccc-ccccchHHHHHHHHHHhcCCCeEE
Confidence 5432 11 111 34588999999998765 599999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEecChhhHHH
Q 001400 330 MDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 330 lDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G~~~~~~~ 397 (1085)
+|||||+||+.|..+|++.+.... .++|+|+ +.|.. .+..-||+|++|++|++...|+.++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~--~~rTvI~-IvH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVM--SGRTVIM-IVHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhc--CCCeEEE-EEecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 999999999999999999999842 3455554 55655 4567899999999999999999999976
No 157
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=8.6e-37 Score=338.21 Aligned_cols=217 Identities=18% Similarity=0.285 Sum_probs=176.5
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh------cccceEEEEccCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIH 913 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gy~~Q~~~~ 913 (1085)
++..+|+||||+|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+
T Consensus 18 ~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 95 (269)
T PRK11831 18 GNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGAL 95 (269)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccChhhHHHHhhcEEEEeccccc
Confidence 45679999999999999999999999999999999999876 4689999999875421 235679999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
++.+|+.||+.+...... ........+.+.++++.+++.+..+..+ ..||||||||++|||||+.+|++||||
T Consensus 96 ~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLD 168 (269)
T PRK11831 96 FTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SELSGGMARRAALARAIALEPDLIMFD 168 (269)
T ss_pred CCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 889999999987532211 1122333455778899999977665543 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc----hHHHHHHHHh
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK----SCELIKYFEV 1067 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~----~~~~~~~~~~ 1067 (1085)
|||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+..+. ...+-.|++.
T Consensus 169 EPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~~~~~~~~~~~~~~~~~~ 245 (269)
T PRK11831 169 EPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKIVAHGSAQALQANPDPRVRQFLDG 245 (269)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEEEEeCCHHHHhcCCcHHHHHHHHH
Confidence 999999999999999999998765 899999999986 47788999999985 789988875431 1234556654
No 158
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5.9e-37 Score=347.84 Aligned_cols=206 Identities=28% Similarity=0.372 Sum_probs=176.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1085)
+.+|+|+|++|++|++++|+||||||||||+++|+|.+.|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 46999999999999999999999999999999999999886 999999999875432 3467999999999899999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.|.+...+... .+....++++++.+||++.+++.++
T Consensus 131 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~----- 171 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS----- 171 (340)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----
Confidence 9999987554332100 0011236678899999988887765
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
+|||||||||+||+||+.+|++|+|||||+|||+.++.++++.|++++.. +++|+.++|..+++.++||+|++|++|+
T Consensus 172 ~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~--g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 172 DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR--GKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999998753 4566668899999999999999999999
Q ss_pred EEEecChhhHHH
Q 001400 386 IVYQGPRVSVLD 397 (1085)
Q Consensus 386 iv~~G~~~~~~~ 397 (1085)
++++|+.+++..
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999988764
No 159
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.6e-37 Score=328.81 Aligned_cols=193 Identities=27% Similarity=0.357 Sum_probs=164.1
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~~~~ 915 (1085)
+.+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999865 468999999987542 124567999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.+|++||+.+....+. .......+.++++++.+++.+..+... .+||+|||||++|||||+.+|++|+||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988643321 122334456788999999876655443 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
|+|||+.++..+.+.|+++.++|.|||++||+++ .+.+.+|++++|++|
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999998777999999999986 466779999999854
No 160
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-37 Score=319.73 Aligned_cols=221 Identities=23% Similarity=0.355 Sum_probs=186.8
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCC----ceEEEEccCCCCC
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQV 221 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 221 (1085)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...+. .-++.-+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 3467999999999999999999999999999999999999987 99999999999877653 4678899999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
++|||-||+..++..+.. +.......+.. ....+...+..++|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~~~~~-------------------~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGRPRAR-------------------KEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhccccch-------------------hhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999988664421 00000000000 00112234578899999999999998875
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+. ++.+|+.+-|+..-++.+||||+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~-~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDR-GGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhc-CCcEEEEEEeccHHHhhhccEEEec
Confidence 9999999999999999999999999999999999999999999999864 4577777999999999999999999
Q ss_pred cCCeEEEecChhhHHH
Q 001400 382 SEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~~ 397 (1085)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999863
No 161
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-37 Score=333.91 Aligned_cols=207 Identities=24% Similarity=0.350 Sum_probs=172.6
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCCCC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIH 913 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~~~ 913 (1085)
.++++.+|+|+||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+
T Consensus 12 ~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~ 89 (241)
T PRK10895 12 AYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDISLLPLHARARRGIGYLPQEASI 89 (241)
T ss_pred EeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHHhCeEEeccCCcc
Confidence 3345679999999999999999999999999999999999866 468999999987642 1235679999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
++.+|++||+.+....+. ..........++++++.+++.+..+.. +..||+|||||++|||||+.+|++|+||
T Consensus 90 ~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllD 162 (241)
T PRK10895 90 FRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGGERRRVEIARALAANPKFILLD 162 (241)
T ss_pred cccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 888999999987542221 112233445678889999887655443 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+|||+.++..+.+.++++.++|.|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 163 EPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 222 (241)
T PRK10895 163 EPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHGTPT 222 (241)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeCCHH
Confidence 999999999999999999998777999999999986 57788999999985 6888888754
No 162
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.5e-37 Score=328.08 Aligned_cols=193 Identities=28% Similarity=0.393 Sum_probs=161.6
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~-~~~~~ 917 (1085)
..+|+|+||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++. .++..
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 679999999999999999999999999999999999866 468999999987532 334567999999975 35678
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
|++||+.+....+. .........++++++.+++.+..+... ..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENLG---LPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987543221 122233445788899999876555443 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
|||+.++..+++.|+++.++|+|||++||+++ ++...||++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 466779999999864
No 163
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.2e-36 Score=331.01 Aligned_cols=204 Identities=27% Similarity=0.406 Sum_probs=169.2
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~ 916 (1085)
+++..+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ....+.++|++|++.+++.
T Consensus 11 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~ 88 (236)
T TIGR03864 11 YGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLD 88 (236)
T ss_pred ECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcccCChhhhhhEEEeCCCCCCccc
Confidence 345679999999999999999999999999999999999866 468999999987542 1223579999999988889
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
.|++||+.+....+. .......+.++++++.+++.+..+... ..||+|||||++|||||+.+|+||||||||
T Consensus 89 ~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~ 160 (236)
T TIGR03864 89 LSVRQNLRYHAALHG---LSRAEARERIAALLARLGLAERADDKV-----RELNGGHRRRVEIARALLHRPALLLLDEPT 160 (236)
T ss_pred CcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999987643321 122333456788899999876655443 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 997 SGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||+.++..+.+.|+++++ +|.|||++||+++. + +.+|++++|++ |++++.|+..
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~~~ 217 (236)
T TIGR03864 161 VGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGAAA 217 (236)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCCHH
Confidence 99999999999999999875 58999999999863 4 45999999985 6888887653
No 164
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-37 Score=326.88 Aligned_cols=200 Identities=33% Similarity=0.481 Sum_probs=167.5
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~ 916 (1085)
+++..+|+|+||++++| +++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.
T Consensus 10 ~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 86 (211)
T cd03264 10 YGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPN 86 (211)
T ss_pred ECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCccccc
Confidence 34557999999999999 999999999999999999999866 468999999987543 2345679999999999999
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
+|+.||+.+....+. ....+..+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|||||||
T Consensus 87 ~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt 158 (211)
T cd03264 87 FTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRRRVGIAQALVGDPSILIVDEPT 158 (211)
T ss_pred CCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999987654331 122233456788999999976655433 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
+|||+.++..+.+.|+++++ +.|||++||+++ .+.+.+|++++|++ |++++.|
T Consensus 159 ~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 159 AGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred ccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999875 699999999986 46678999999985 6777654
No 165
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.5e-36 Score=325.12 Aligned_cols=204 Identities=19% Similarity=0.282 Sum_probs=152.0
Q ss_pred ccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcC
Q 001400 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1085)
Q Consensus 813 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g 892 (1085)
.|..+-.++++|.++ +.++++++++|-|.--..+|||||||.||||||++|.|... +..|+..-+
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~--P~~GE~RKn- 647 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLD--PNDGELRKN- 647 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCC--CCcchhhcc-
Confidence 344455566655432 56788999999999999999999999999999999999776 446664322
Q ss_pred ccCChhcccceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001400 893 YPKRQETFARISGYCEQNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLS 970 (1085)
Q Consensus 893 ~~~~~~~~~~~~gy~~Q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS 970 (1085)
.+-+||+..|... +-..-|.-|.|.-.. ..+. +.....+-.+||...++.+- +..||
T Consensus 648 -------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~F------Nlpy----q~ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 648 -------HRLRIGWFDQHANEALNGEETPVEYLQRKF------NLPY----QEARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred -------ceeeeechhhhhHHhhccccCHHHHHHHhc------CCCh----HHHHHHhhhhhhhhccceEe----eeecC
Confidence 2345888887643 334456777664221 1122 22346677788877666543 45799
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 001400 971 TEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 1050 (1085)
Q Consensus 971 ~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~ 1050 (1085)
||||-||++|-.-+..|+||||||||++||.++...+-++|+++ ...||++|||..+ +.+.-..++|+.+.|.-..
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhc
Confidence 99999999999999999999999999999999999999999986 5689999999764 5565567888887776566
Q ss_pred ecCCCC
Q 001400 1051 AGPLGS 1056 (1085)
Q Consensus 1051 ~g~~~~ 1056 (1085)
.|...+
T Consensus 783 dGdFeD 788 (807)
T KOG0066|consen 783 DGDFED 788 (807)
T ss_pred cccHHH
Confidence 666543
No 166
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-37 Score=342.57 Aligned_cols=203 Identities=25% Similarity=0.331 Sum_probs=169.4
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCC-------------------------
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR------------------------- 896 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~------------------------- 896 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKI 97 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceeccccccccccccccccccccccccccc
Confidence 359999999999999999999999999999999999876 45899999986531
Q ss_pred --hhcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHH
Q 001400 897 --QETFARISGYCEQNDI-HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTE 972 (1085)
Q Consensus 897 --~~~~~~~~gy~~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~G 972 (1085)
....++.+||++|++. .+...||+||+.|+.... ........+.++++++.++|. ++.+.. +..||||
T Consensus 98 ~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgG 169 (305)
T PRK13651 98 KKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYIELVGLDESYLQRS-----PFELSGG 169 (305)
T ss_pred chHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hhhCCHH
Confidence 1234677999999862 344579999999875432 223344456788999999996 555543 3579999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 973 qrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
||||++||++|+.+|++|||||||+|||+.++..+++.|+++.+.|.|||++|||++ .+.+.||++++|++ |++++.|
T Consensus 170 qkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~-~~~~~adrv~vl~~-G~i~~~g 247 (305)
T PRK13651 170 QKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLD-NVLEWTKRTIFFKD-GKIIKDG 247 (305)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999986 47788999999985 6899988
Q ss_pred CCCC
Q 001400 1053 PLGS 1056 (1085)
Q Consensus 1053 ~~~~ 1056 (1085)
+..+
T Consensus 248 ~~~~ 251 (305)
T PRK13651 248 DTYD 251 (305)
T ss_pred CHHH
Confidence 7643
No 167
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-37 Score=341.59 Aligned_cols=202 Identities=25% Similarity=0.318 Sum_probs=168.7
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------hcccceEEEEccCCC-C
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-H 913 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gy~~Q~~~-~ 913 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|+++.. ..+++.+|||+|++. .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQ 97 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhhEEEEeeCchhh
Confidence 469999999999999999999999999999999999876 468999999987631 235667999999863 2
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+...||+||+.|+.... .....+..+.++++++.++|. ...+.. +..||+|||||++|||||+.+|++|||
T Consensus 98 l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~lAraL~~~P~llll 169 (290)
T PRK13634 98 LFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PFELSGGQMRRVAIAGVLAMEPEVLVL 169 (290)
T ss_pred hhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 33579999998875322 122333445688999999996 455543 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||+|||+.++..+++.|+++.++ |.|||++|||++ ++.+.||++++|+ +|++++.|+..
T Consensus 170 DEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~-~G~i~~~g~~~ 231 (290)
T PRK13634 170 DEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMH-KGTVFLQGTPR 231 (290)
T ss_pred ECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 9999999999999999999999764 999999999987 4778899999998 57899988754
No 168
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-35 Score=336.69 Aligned_cols=215 Identities=27% Similarity=0.478 Sum_probs=177.9
Q ss_pred ccceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcC
Q 001400 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1085)
Q Consensus 813 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g 892 (1085)
.+..+..++++|.++ +++++++|+|+++++|+++||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 345555566666542 23389999999999999999999999999999999999877 4689999999
Q ss_pred ccCC---hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccccc------ccCC
Q 001400 893 YPKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGA------LIGL 963 (1085)
Q Consensus 893 ~~~~---~~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~------~~~~ 963 (1085)
.+.. ...+++.++||+|+|.++++ |++||+.++. + +. .++.+.++++..++.+..+. .++.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~----~-~~----s~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLAR----P-DA----SDEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccC----C-cC----CHHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 56789999999999999876 9999998752 1 11 23456788888888766554 2332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEe
Q 001400 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1085)
Q Consensus 964 ~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~ 1043 (1085)
++.+|||||+|||++||||+.+++++++||||++||.++.+.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 3467999999999999999999999999999999999999999999999875 699999999974 567889999998
Q ss_pred cCcEEEEecCCCC
Q 001400 1044 RGGELIYAGPLGS 1056 (1085)
Q Consensus 1044 ~gG~~~~~g~~~~ 1056 (1085)
+ |+++..|...+
T Consensus 529 ~-G~l~~~g~~~~ 540 (559)
T COG4988 529 N-GRLVEQGTHEE 540 (559)
T ss_pred C-CceeccCCHHH
Confidence 4 78999887543
No 169
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.1e-36 Score=328.30 Aligned_cols=197 Identities=26% Similarity=0.323 Sum_probs=165.7
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---h---cccceEEEEccCCCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---E---TFARISGYCEQNDIHS 914 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~---~~~~~~gy~~Q~~~~~ 914 (1085)
+..+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. . .+++.++|++|++.++
T Consensus 14 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 14 GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 3569999999999999999999999999999999999876 568999999987532 1 2456799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+..|++||+.+....+. ....+....++++++.+++.+..+.. +..||+|||||++|||||+.+|++|+|||
T Consensus 92 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDE 163 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAG---ASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLSGGEQQRVGIARAVVNKPAVLLADE 163 (222)
T ss_pred ccccHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----chhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 89999999988654321 22233344577889999987665543 25799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~ 1049 (1085)
||+|||+.++..+.+.|+++.++|.|||++||+++ ++...+|++++|++ |+++
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 164 PTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 99999999999999999998777899999999986 46677999999986 5653
No 170
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=338.15 Aligned_cols=202 Identities=25% Similarity=0.325 Sum_probs=169.8
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~-~~~~~ 917 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++. .++..
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 469999999999999999999999999999999999876 468999999987643 234567999999873 34568
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
||.||+.|+.... ........+.++++++.+++.+..+... ..||||||||++|||||+.+|++|||||||+
T Consensus 96 tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~ 167 (274)
T PRK13647 96 TVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMA 167 (274)
T ss_pred cHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 9999998764321 1223333456788999999977666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+.++..+++.|++++++|.|||++||+++ .+.+.||++++|++ |++++.|+..
T Consensus 168 ~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 223 (274)
T PRK13647 168 YLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAEGDKS 223 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 99999999999999999877999999999986 46688999999985 7888888753
No 171
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9.3e-37 Score=326.84 Aligned_cols=197 Identities=26% Similarity=0.362 Sum_probs=165.5
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-----hcccceEEEEccCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~~ 913 (1085)
+++..+|+++||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+
T Consensus 10 ~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 87 (213)
T cd03262 10 FGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNL 87 (213)
T ss_pred ECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEeccccc
Confidence 344679999999999999999999999999999999999876 468999999987631 2346789999999998
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
++.+|++||+.+...... ........+.++++++.+++.+..+... .+||+|||||++|||||+.+|++||||
T Consensus 88 ~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllD 160 (213)
T cd03262 88 FPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMNPKVMLFD 160 (213)
T ss_pred CCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 889999999987542111 1122334456788899999876655543 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
|||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++|
T Consensus 161 EP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 161 EPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999877899999999986 466789999999864
No 172
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2e-36 Score=327.03 Aligned_cols=205 Identities=38% Similarity=0.712 Sum_probs=169.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC-CCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHH
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT-GGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 920 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~-~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~ 920 (1085)
+.+|+|+||+|++||+++|+||||||||||+++|+|... +.+.+|+|.++|.+.....+++.++|++|++.+++.+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 99 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVR 99 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcHH
Confidence 579999999999999999999999999999999999754 1246899999998775555677899999999999999999
Q ss_pred HHHHHhhhhcCCCcccHHHHHHHHHH-HHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Q 001400 921 ESLLFSAWLRLPSEIELETQRAFVEE-VMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1085)
Q Consensus 921 e~l~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgL 999 (1085)
||+.|......+...........+++ .++.+++.+..+.. +..||+|||||++|||+|+.+|++|+|||||+||
T Consensus 100 enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~illlDEP~~gL 174 (226)
T cd03234 100 ETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGL 174 (226)
T ss_pred HHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCC
Confidence 99998654332221111222233445 78888887665543 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 1000 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
|+.++..+.+.++++.++|.|||++||++..++.+.+|++++|++ |++++.|
T Consensus 175 D~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 175 DSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999998777899999999974357889999999985 7888764
No 173
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=329.37 Aligned_cols=209 Identities=29% Similarity=0.394 Sum_probs=172.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1085)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 36999999999999999999999999999999999998776 9999999988754322 4579999999988888999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.|+....+...+.+ . ......++.+++.+||++..++.+ ..
T Consensus 92 ~e~l~~~~~~~~~~~~~~-----------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSERPP-----------------E-------------AEIRAKVHELLKLVQLDWLADRYP-----AQ 136 (239)
T ss_pred HHHHhhhhhhccccccCC-----------------H-------------HHHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 999988643221100000 0 001123677899999987666554 46
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++..++|++++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDEL-HVTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 99999999999999999999999999999999999999999999987643 34566677888889999999999999999
Q ss_pred EEecChhhH
Q 001400 387 VYQGPRVSV 395 (1085)
Q Consensus 387 v~~G~~~~~ 395 (1085)
++.|+.+++
T Consensus 216 ~~~~~~~~~ 224 (239)
T cd03296 216 EQVGTPDEV 224 (239)
T ss_pred EEecCHHHH
Confidence 999988765
No 174
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-36 Score=326.19 Aligned_cols=200 Identities=31% Similarity=0.432 Sum_probs=167.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-CCceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 226 (1085)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999998876 999999998875432 24579999999888889999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.++....+.. . . .....++++++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~--~--------~------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (213)
T cd03259 90 AENIAFGLKLRGVP--K--------A------------------------EIRARVRELLELVGLEGLLNRYP-----HE 130 (213)
T ss_pred HHHHHhHHHHcCCC--H--------H------------------------HHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 99998764321100 0 0 00123677889999987776655 46
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQREL-GITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987533 45566688888999999999999999999
Q ss_pred EEec
Q 001400 387 VYQG 390 (1085)
Q Consensus 387 v~~G 390 (1085)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 175
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.2e-36 Score=326.11 Aligned_cols=211 Identities=25% Similarity=0.361 Sum_probs=174.9
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
+++..+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++..|
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t 86 (223)
T TIGR03740 10 FGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLT 86 (223)
T ss_pred ECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCC
Confidence 345679999999999999999999999999999999999866 56899999998764322 357999999998888899
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsg 998 (1085)
++||+.+....+. .. ...+.++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||+|
T Consensus 87 ~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~ 154 (223)
T TIGR03740 87 ARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNG 154 (223)
T ss_pred HHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccC
Confidence 9999987643321 11 234678889999987665543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCchHHHHHHHHh
Q 001400 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEV 1067 (1085)
Q Consensus 999 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~~~~~~~~~~~ 1067 (1085)
||+.++..+++.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++.|+..+ ...+-+.|..
T Consensus 155 LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~~-~~~~~~~~~~ 220 (223)
T TIGR03740 155 LDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKINK-SENLEKLFVE 220 (223)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChhh-cccHHHHHHH
Confidence 9999999999999999777999999999986 46788999999985 78999888653 2334444443
No 176
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=332.86 Aligned_cols=205 Identities=22% Similarity=0.312 Sum_probs=170.9
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----------------hcccce
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----------------ETFARI 903 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~ 903 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (257)
T PRK10619 16 GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTR 93 (257)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccccccccccccccchHHHHHhhc
Confidence 44679999999999999999999999999999999999876 468999999986531 234567
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCCHHHHHHHHHHHH
Q 001400 904 SGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVE 982 (1085)
Q Consensus 904 ~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~LS~Gqrqrl~iA~a 982 (1085)
++|++|++.+++.+|++||+.+...... ........+.+.++++.+++.+.. +.. +..||+|||||++||||
T Consensus 94 i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~G~~qrv~lara 166 (257)
T PRK10619 94 LTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQGKY-----PVHLSGGQQQRVSIARA 166 (257)
T ss_pred eEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHH
Confidence 9999999999989999999987532111 112233455678899999987643 332 35799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 983 LVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 983 L~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+...||++++|++ |++++.|+..
T Consensus 167 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 237 (257)
T PRK10619 167 LAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSHVIFLHQ-GKIEEEGAPE 237 (257)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999999999999999777999999999986 46677999999985 7888888753
No 177
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=334.09 Aligned_cols=209 Identities=22% Similarity=0.253 Sum_probs=171.1
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh---c-ccceEEEEccCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHS 914 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gy~~Q~~~~~ 914 (1085)
+++..+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++... . .+..++|++|++.++
T Consensus 15 ~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (255)
T PRK11300 15 FGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLF 92 (255)
T ss_pred ECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEECCCCCHHHHHhcCeEEeccCcccC
Confidence 345679999999999999999999999999999999999866 5689999999876421 1 234589999999999
Q ss_pred CCCCHHHHHHHhhhhcCC----------C--cccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHH
Q 001400 915 PGLTVLESLLFSAWLRLP----------S--EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVE 982 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~----------~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~a 982 (1085)
+.+|++||+.++...... . .....+....++++++.+++.+..+... ..||+|||||++||+|
T Consensus 93 ~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~a 167 (255)
T PRK11300 93 REMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQA-----GNLAYGQQRRLEIARC 167 (255)
T ss_pred CCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCCh-----hhCCHHHHHHHHHHHH
Confidence 999999999876421100 0 0011123345678888888876655543 5799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 983 LVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 983 L~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|+.+|++|||||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.||++++|++ |++++.|+..+
T Consensus 168 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 240 (255)
T PRK11300 168 MVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDRIYVVNQ-GTPLANGTPEE 240 (255)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEecCCHHH
Confidence 99999999999999999999999999999999765 899999999986 47788999999985 78898887643
No 178
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=337.29 Aligned_cols=224 Identities=27% Similarity=0.361 Sum_probs=180.4
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-------CCCceEEEEccCC-CC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQD-WQ 220 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 220 (1085)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999876 99999999987421 1245799999986 23
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-ccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLV 299 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 299 (1085)
+...||.||+.|+....+... . +...++.++++.+||. ...++.
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~L~~~~~~~~- 141 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------E------------------------KAEKIAAEKLEMVGLADEFWEKS- 141 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCChhhccCC-
Confidence 444699999998754322100 0 0122477889999996 344543
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+. +.+|+.++|+.+++.++||+|+
T Consensus 142 ----~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~--g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 142 ----PFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQS--GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ----cccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCHHHHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999988653 4566668899999999999999
Q ss_pred EecCCeEEEecChhhHH---HHHHhCCCCCCCCCChhHHH
Q 001400 380 LLSEGQIVYQGPRVSVL---DFFASMGFSCPKRKNVADFL 416 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~---~~f~~~G~~~p~~~~~adfl 416 (1085)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999998874 34556677776654444433
No 179
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=339.61 Aligned_cols=201 Identities=22% Similarity=0.343 Sum_probs=168.2
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------hcccceEEEEccCC--C
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 912 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gy~~Q~~--~ 912 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.++.. ..+++.+|||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQ 97 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhheEEEecChHhc
Confidence 469999999999999999999999999999999999876 468999999987632 23567899999986 3
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
+++ .|+.||+.|+.... ........+.+.++++.+++. +..+.. +..||+|||||++|||||+.+|+|||
T Consensus 98 l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~laraL~~~p~ill 168 (286)
T PRK13646 98 LFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----PFQMSGGQMRKIAIVSILAMNPDIIV 168 (286)
T ss_pred cch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 444 59999998864322 123334455678899999986 455543 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++.+ .|.|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 169 lDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~-G~i~~~g~~~ 231 (286)
T PRK13646 169 LDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE-GSIVSQTSPK 231 (286)
T ss_pred EECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999999999975 4899999999986 46788999999985 7899888754
No 180
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.6e-36 Score=328.58 Aligned_cols=200 Identities=25% Similarity=0.309 Sum_probs=162.0
Q ss_pred EEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCC--CCC
Q 001400 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHS 914 (1085)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~--~~~ 914 (1085)
.+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.+||++|++ .+.
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999866 568999999987643 23456899999998 456
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
+.+|++||+.+........ .........++++++.+++. ...+.. +..||+|||||++|||||+.+|++||||
T Consensus 97 ~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PHELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----chhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 7899999998764332211 11111112235788888884 344433 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
|||+|||+.++..+.+.|++++++ |+|||++||+++ .+...+|++++|++ |+++..|
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 228 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-GKIVEEG 228 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-CEEEecC
Confidence 999999999999999999999765 899999999986 46668999999985 6777654
No 181
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=339.34 Aligned_cols=218 Identities=27% Similarity=0.397 Sum_probs=177.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-----CCceEEEEccCCC-CC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDW-QV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 221 (1085)
+++|+|||++|++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999876 999999999876532 2467999999863 34
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc--ccccccc
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD--TCADTLV 299 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 299 (1085)
..+||+||+.|+....+.. + .+...+++++++.+||+ +..|+.
T Consensus 97 ~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~- 141 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS-E---------------------------------EEIENRVKRAMNIVGLDYEDYKDKS- 141 (287)
T ss_pred ccccHHHHHHhHHHHCCCC-H---------------------------------HHHHHHHHHHHHHcCCCchhhccCC-
Confidence 4679999998864322110 0 00122478889999996 445544
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
++.||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++++.. +++|+.++|+.+++..+||+|+
T Consensus 142 ----~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 142 ----PFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEY-NMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 45799999999999999999999999999999999999999999999987643 4566678899999999999999
Q ss_pred EecCCeEEEecChhhHHH---HHHhCCCCCCC
Q 001400 380 LLSEGQIVYQGPRVSVLD---FFASMGFSCPK 408 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 408 (1085)
+|++|++++.|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23345555544
No 182
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=338.63 Aligned_cols=202 Identities=25% Similarity=0.319 Sum_probs=168.9
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------hcccceEEEEccCCC-C
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-H 913 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gy~~Q~~~-~ 913 (1085)
+.+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++. .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQ 97 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhceEEEEeChhhh
Confidence 469999999999999999999999999999999999876 568999999987532 234567999999973 2
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+..+|+.||+.|+...+ ........+.++++++.+++. +..+... ..||+|||||++|||||+.+|++|||
T Consensus 98 ~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lLlL 169 (287)
T PRK13641 98 LFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP-----FELSGGQMRRVAIAGVMAYEPEILCL 169 (287)
T ss_pred hccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 33579999998764322 122334445678999999996 5555543 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||+|||+.++..+.+.|+++.++|.|||++||+++ .+.+.||++++|++ |++++.|+..
T Consensus 170 DEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~~ 230 (287)
T PRK13641 170 DEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GKLIKHASPK 230 (287)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999999777999999999986 47788999999985 7888888754
No 183
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=327.45 Aligned_cols=204 Identities=29% Similarity=0.382 Sum_probs=171.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC--CCCceEEEEccCCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 225 (1085)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999998776 99999999876432 12357999999998899999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.+.....+... .+....++++++.+||++..++.+ .
T Consensus 90 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (220)
T cd03265 90 GWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLV-----K 130 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh-----h
Confidence 9999988643321100 001224778899999987777665 4
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|++++|.+|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEF-GMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999987643 4556668899999999999999999999
Q ss_pred EEEecChhh
Q 001400 386 IVYQGPRVS 394 (1085)
Q Consensus 386 iv~~G~~~~ 394 (1085)
+++.|++++
T Consensus 210 i~~~~~~~~ 218 (220)
T cd03265 210 IIAEGTPEE 218 (220)
T ss_pred EEEeCChHH
Confidence 999988765
No 184
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=332.34 Aligned_cols=196 Identities=22% Similarity=0.301 Sum_probs=166.8
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv 919 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+++..||
T Consensus 23 ~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~l~~~~tv 98 (257)
T PRK11247 23 GERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPLA--EAREDTRLMFQDARLLPWKKV 98 (257)
T ss_pred CCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEHH--HhhCceEEEecCccCCCCCcH
Confidence 34579999999999999999999999999999999999866 46899999987643 345679999999988888999
Q ss_pred HHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Q 001400 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1085)
Q Consensus 920 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgL 999 (1085)
+||+.+... . .....+.++++.+++.+..+.. +..||||||||++|||+|+.+|++|||||||+||
T Consensus 99 ~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~L 164 (257)
T PRK11247 99 IDNVGLGLK-----G----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQRVALARALIHRPGLLLLDEPLGAL 164 (257)
T ss_pred HHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 999987421 0 1124567889999997765554 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 1000 DARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 1000 D~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+.++..+.+.|+++.+ .|.|||++||+++ .+.+.+|++++|++ |++++.++..
T Consensus 165 D~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 219 (257)
T PRK11247 165 DALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTVD 219 (257)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecccc
Confidence 99999999999999865 4899999999986 46778999999985 6888888653
No 185
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=341.85 Aligned_cols=201 Identities=23% Similarity=0.318 Sum_probs=167.9
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------------------hcccc
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------------------ETFAR 902 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------------------~~~~~ 902 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRR 116 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEcccccccccccccccccccchHHHHHh
Confidence 469999999999999999999999999999999999876 568999999976532 23567
Q ss_pred eEEEEccCC--CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHH
Q 001400 903 ISGYCEQND--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTI 979 (1085)
Q Consensus 903 ~~gy~~Q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~i 979 (1085)
.+|||+|++ .+++ .|++||+.|+.... .....+....+.++++.+++. +..+.. +.+||||||||++|
T Consensus 117 ~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGqkqRvai 187 (320)
T PRK13631 117 RVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLDDSYLERS-----PFGLSGGQKRRVAI 187 (320)
T ss_pred cEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----cccCCHHHHHHHHH
Confidence 899999987 3454 59999998864322 122333445678899999986 444443 35799999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 980 AVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 980 A~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||+.+|+||||||||+|||+.++..+++.|+++.++|+|||++||+++ .+.+.||++++|++ |+++..|+..
T Consensus 188 AraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~~~adri~vl~~-G~i~~~g~~~ 261 (320)
T PRK13631 188 AGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVLEVADEVIVMDK-GKILKTGTPY 261 (320)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999999999999999998777999999999986 46788999999985 7899988754
No 186
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.5e-36 Score=325.33 Aligned_cols=195 Identities=27% Similarity=0.395 Sum_probs=162.4
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh---c---cc-ceEEEEccCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T---FA-RISGYCEQNDIHS 914 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~---~~-~~~gy~~Q~~~~~ 914 (1085)
..+|+|+||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++... . ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 579999999999999999999999999999999999866 5689999999875421 1 22 5799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+..|++||+.+....+. .......+.+.++++.+++.+..+... ..||+|||||++|||+|+.+|+||||||
T Consensus 96 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDE 167 (221)
T TIGR02211 96 PDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SELSGGERQRVAIARALVNQPSLVLADE 167 (221)
T ss_pred CCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 89999999987643321 122233455778999999976655543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 001400 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~ 1049 (1085)
||+|||+.++..+.+.|+++++ .|.|||++||+++ .+ +.+|++++|++ |+++
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i~ 220 (221)
T TIGR02211 168 PTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQLF 220 (221)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEec
Confidence 9999999999999999999875 4899999999986 34 55899999985 5654
No 187
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.1e-36 Score=326.80 Aligned_cols=195 Identities=25% Similarity=0.364 Sum_probs=163.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1085)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999998876 999999998775432 235799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||+||+.++.+..+... ......++++++.+||++..++.+
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 136 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP-- 136 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 99999999988654321100 001224678899999987776654
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. +++|+.++|+.+++..++|++++|
T Consensus 137 ---~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 137 ---MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRR--GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 455666888889999999999999
Q ss_pred cCCeE
Q 001400 382 SEGQI 386 (1085)
Q Consensus 382 ~~G~i 386 (1085)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99975
No 188
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=338.06 Aligned_cols=201 Identities=27% Similarity=0.369 Sum_probs=169.0
Q ss_pred EEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------hcccceEEEEccCC--CC
Q 001400 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--IH 913 (1085)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gy~~Q~~--~~ 913 (1085)
.+|+||||+|.+||++||+|+||||||||+++|+|... +.+|+|+++|.++.. ..+++.+||++|++ .+
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l 97 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQL 97 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECccccccccHHHHHhhEEEEecCcchhc
Confidence 59999999999999999999999999999999999876 568999999987631 23567899999987 34
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+ ..||.||+.|+.... .....+.++.+.++++.+++. .+.+.. +..||+|||||++|||+|+.+|+||||
T Consensus 98 ~-~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~~LSgGqkqrvaiA~aL~~~p~illL 168 (288)
T PRK13643 98 F-EETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----PFELSGGQMRRVAIAGILAMEPEVLVL 168 (288)
T ss_pred c-cchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----cccCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 4 469999999875332 123344456678999999985 344443 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
||||+|||+.++..+.+.|++++++|.|||++||+++ ++.+.||++++|++ |++++.|+..+
T Consensus 169 DEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G~i~~~g~~~~ 230 (288)
T PRK13643 169 DEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-GHIISCGTPSD 230 (288)
T ss_pred ECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHHH
Confidence 9999999999999999999999877999999999986 46788999999985 78999987643
No 189
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=332.88 Aligned_cols=210 Identities=25% Similarity=0.370 Sum_probs=172.6
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~ 914 (1085)
.+++..+|+||||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.++
T Consensus 11 ~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (255)
T PRK11231 11 GYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPISMLSSRQLARRLALLPQHHLTP 88 (255)
T ss_pred EECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhHHCCHHHHhhheEEecccCCCC
Confidence 3455679999999999999999999999999999999999865 468999999986532 23456799999998888
Q ss_pred CCCCHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 915 PGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
+.+|+.||+.++...... ...........++++++.+++.+..+... ..||+|||||++|||||+.+|++||||
T Consensus 89 ~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllD 163 (255)
T PRK11231 89 EGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGGQRQRAFLAMVLAQDTPVVLLD 163 (255)
T ss_pred CCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 889999999875311000 01111223455788899999876665543 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |+++..|+..+
T Consensus 164 EP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 224 (255)
T PRK11231 164 EPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQGTPEE 224 (255)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEcCHHH
Confidence 999999999999999999998777999999999986 57788999999985 68888887654
No 190
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3e-36 Score=329.31 Aligned_cols=207 Identities=24% Similarity=0.325 Sum_probs=170.6
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh----cccceEEEEccCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHS 914 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gy~~Q~~~~~ 914 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++.++
T Consensus 12 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 89 (242)
T TIGR03411 12 FDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVF 89 (242)
T ss_pred cCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecCCCCHHHHHhcCeeEeccccccC
Confidence 345679999999999999999999999999999999999865 4689999999875421 1345699999999999
Q ss_pred CCCCHHHHHHHhhhhcCC-----CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 915 PGLTVLESLLFSAWLRLP-----SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
+.+|++||+.+....... ...........++++++.+++.+..+... ..||+|||||++|||||+.+|++
T Consensus 90 ~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrv~laral~~~p~~ 164 (242)
T TIGR03411 90 ENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----GLLSHGQKQWLEIGMLLMQDPKL 164 (242)
T ss_pred CCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999875321100 00112233456788999999877655543 57999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |+++..|+..
T Consensus 165 lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~~~~~~~~~ 227 (242)
T TIGR03411 165 LLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GSVLAEGSLD 227 (242)
T ss_pred EEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEeeCCHH
Confidence 999999999999999999999999865 799999999986 46778999999985 7888888754
No 191
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-36 Score=334.04 Aligned_cols=207 Identities=23% Similarity=0.320 Sum_probs=174.1
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-------CceEEEEccCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1085)
.+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 357999999999999999999999999999999999999876 9999999988754321 357999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1085)
+++.+||+||+.+.....+... ......++++++.+||++..++.+
T Consensus 113 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 158 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKYP 158 (269)
T ss_pred cCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCc
Confidence 8989999999988643321100 000123677899999987777665
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
+ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+++
T Consensus 159 ~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiii~tH~~~~~~~~~d~v~ 232 (269)
T cd03294 159 D-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAEL-QKTIVFITHDLDEALRLGDRIA 232 (269)
T ss_pred c-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEE
Confidence 4 699999999999999999999999999999999999999999999987543 4556667888899999999999
Q ss_pred EecCCeEEEecChhhHH
Q 001400 380 LLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~ 396 (1085)
+|++|++++.|+.+++.
T Consensus 233 ~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 233 IMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999987764
No 192
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=330.16 Aligned_cols=202 Identities=21% Similarity=0.317 Sum_probs=167.4
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh----cccceEEEEccCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 915 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gy~~Q~~~~~~ 915 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++
T Consensus 16 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (237)
T PRK11614 16 GKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFS 93 (237)
T ss_pred CCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEecCCCCHHHHHHhCEEEeccCcccCC
Confidence 44579999999999999999999999999999999999866 4689999999875431 24567999999998888
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
..||.||+.+..... . .....+.++++++.+ ++.+..+.. +..||+|||||++|||||+.+|+||+|||
T Consensus 94 ~~tv~~~l~~~~~~~---~--~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~illlDE 163 (237)
T PRK11614 94 RMTVEENLAMGGFFA---E--RDQFQERIKWVYELFPRLHERRIQR-----AGTMSGGEQQMLAIGRALMSQPRLLLLDE 163 (237)
T ss_pred CCcHHHHHHHhhhcc---C--hhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 899999998754211 1 112233456677766 355444332 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 222 (237)
T PRK11614 164 PSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVLEDTGD 222 (237)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEeeCCHH
Confidence 99999999999999999998877999999999986 57889999999985 7899998764
No 193
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3e-36 Score=330.21 Aligned_cols=205 Identities=27% Similarity=0.336 Sum_probs=168.6
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCCh-----hcccceEEEEccC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQN 910 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~ 910 (1085)
+++..+++|+||+|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.++.. ...++.++|++|+
T Consensus 11 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~ 90 (247)
T TIGR00972 11 YGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQK 90 (247)
T ss_pred ECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecC
Confidence 34457999999999999999999999999999999999986521 128999999987642 2345679999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC----cccccccCCCCCCCCCHHHHHHHHHHHHHhcC
Q 001400 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT----SLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1085)
Q Consensus 911 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~ 986 (1085)
+.+++ .|++||+.+....+. ........+.++++++.+++. +..+.. +..||+|||||++|||||+.+
T Consensus 91 ~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~ 162 (247)
T TIGR00972 91 PNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS-----ALGLSGGQQQRLCIARALAVE 162 (247)
T ss_pred cccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC-----cccCCHHHHHHHHHHHHHhcC
Confidence 88888 999999987653321 112233445678899999986 333332 357999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 987 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|++|||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 163 p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (247)
T TIGR00972 163 PEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD-GELVEYGPT 227 (247)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999876 589999999986 47788999999985 688888875
No 194
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.8e-36 Score=341.04 Aligned_cols=206 Identities=30% Similarity=0.387 Sum_probs=174.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1085)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 36999999999999999999999999999999999998876 999999998764321 2467999999998889999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.+.....+... . .....++.+++.+||++..++.++
T Consensus 94 v~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMST----------R------------------------EIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHCCChhHhcCchh-----
Confidence 9999986543221100 0 001236678899999888777664
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~--g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR--GKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999998753 4566668899999999999999999999
Q ss_pred EEEecChhhHHH
Q 001400 386 IVYQGPRVSVLD 397 (1085)
Q Consensus 386 iv~~G~~~~~~~ 397 (1085)
+++.|+.+++..
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999888753
No 195
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-36 Score=304.37 Aligned_cols=206 Identities=28% Similarity=0.465 Sum_probs=173.7
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCC---ceEEEEccCCCCCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP---RTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lT 225 (1085)
.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++++||.+++.+.+. +.-+..+|+..+-+..|
T Consensus 15 ~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFt 91 (259)
T COG4559 15 RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFT 91 (259)
T ss_pred eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceE
Confidence 5999999999999999999999999999999999999887 99999999999877543 56689999977766679
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+|-+.++..-.+.+.. |. +....++.+|...++.+.+... .+
T Consensus 92 v~eVV~mGr~p~~~g~~-----------------~~---------------e~~~i~~~ala~~d~~~la~R~-----y~ 134 (259)
T COG4559 92 VQEVVQMGRIPHRSGRE-----------------PE---------------EDERIAAQALAATDLSGLAGRD-----YR 134 (259)
T ss_pred HHHHHHhcccccccCCC-----------------ch---------------hhHHHHHHHHHHcChhhhhccc-----hh
Confidence 99999998654322211 00 1123477788888888776543 45
Q ss_pred cCchhhhhHHHHHHHHhC------CCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 306 GISGGQKKRLTTGELLVG------PARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~------~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
.|||||||||.+||.|+. ++++||||||||+||...+..+++..|++++. +..|+.++|+.+-+..++|+|+
T Consensus 135 ~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDriv 212 (259)
T COG4559 135 TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRIV 212 (259)
T ss_pred hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhheee
Confidence 799999999999999985 44699999999999999999999999999985 3556668899999999999999
Q ss_pred EecCCeEEEecChhhHH
Q 001400 380 LLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~ 396 (1085)
+|++||++..|++++++
T Consensus 213 ll~~Grv~a~g~p~~vl 229 (259)
T COG4559 213 LLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeCCeEeecCCHHHhc
Confidence 99999999999998886
No 196
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.8e-37 Score=306.96 Aligned_cols=209 Identities=20% Similarity=0.344 Sum_probs=180.0
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVA 222 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 222 (1085)
++++++|||+.+++||+++++|||||||||...++.|+..|+ +|+|.++|.+++.+.. +.-+||+||++..|-
T Consensus 16 kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 16 KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 457999999999999999999999999999999999999988 9999999999987654 246899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
.+||+|||.-....+....+ ..+.+.+.+.+|+.|.|.|+++..-
T Consensus 93 ~LtV~dNi~~vlE~~~~d~~--------------------------------~~~~~~~l~~LL~ef~i~hlr~~~a--- 137 (243)
T COG1137 93 KLTVEDNIMAVLEIREKDLK--------------------------------KAERKEELDALLEEFHITHLRDSKA--- 137 (243)
T ss_pred cCcHHHHHHHHHhhhhcchh--------------------------------HHHHHHHHHHHHHHhchHHHhcCcc---
Confidence 99999999866543321000 0011335789999999999998653
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
-.||||||+|+.|||||+.+|+.++||||++|+||-+..+|.+.++++... +.-|++.-|...|+..++||.++++
T Consensus 138 --~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~r--giGvLITDHNVREtL~i~dRaYIi~ 213 (243)
T COG1137 138 --YSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDR--GIGVLITDHNVRETLDICDRAYIIS 213 (243)
T ss_pred --cccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhC--CceEEEccccHHHHHhhhheEEEEe
Confidence 369999999999999999999999999999999999999999999999763 4445557799999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 001400 383 EGQIVYQGPRVSVLD 397 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1085)
+|++..+|+++++.+
T Consensus 214 ~G~vla~G~p~ei~~ 228 (243)
T COG1137 214 DGKVLAEGSPEEIVN 228 (243)
T ss_pred cCeEEecCCHHHHhc
Confidence 999999999998863
No 197
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=334.44 Aligned_cols=205 Identities=23% Similarity=0.320 Sum_probs=170.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCC-CCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1085)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++||+|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35999999999999999999999999999999999999876 999999999875432 2357999999973 6778
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+|||.|+....+... .+...+++++++.+||++..+..+
T Consensus 97 ~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~---- 138 (279)
T PRK13650 97 ATVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP---- 138 (279)
T ss_pred ccHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 899999988643221100 001224778899999987776654
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++ ..+|+|++|++
T Consensus 139 -~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 139 -ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDY-QMTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999987643 45555577888887 58999999999
Q ss_pred CeEEEecChhhHH
Q 001400 384 GQIVYQGPRVSVL 396 (1085)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1085)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (279)
T PRK13650 216 GQVESTSTPRELF 228 (279)
T ss_pred CEEEEECCHHHHH
Confidence 9999999988765
No 198
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=336.71 Aligned_cols=204 Identities=26% Similarity=0.353 Sum_probs=170.9
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCC-----hhcccceEEEEccCCCC-C
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR-----QETFARISGYCEQNDIH-S 914 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~-----~~~~~~~~gy~~Q~~~~-~ 914 (1085)
+..+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.. ...+++.+||++|++.. .
T Consensus 18 ~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 18 GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 3569999999999999999999999999999999999876 56899999998763 12356789999998742 3
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
...|++||+.+..... ........+.++++++.+++.+..+... ..||+|||||++|||||+.+|+||+|||
T Consensus 96 ~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrl~laraL~~~p~lLilDE 167 (283)
T PRK13636 96 FSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCLSFGQKKRVAIAGVLVMEPKVLVLDE 167 (283)
T ss_pred ccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4679999998764322 1223334456789999999987666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.|+..+
T Consensus 168 Pt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i~~~g~~~~ 228 (283)
T PRK13636 168 PTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRVILQGNPKE 228 (283)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCHHH
Confidence 99999999999999999999765 899999999986 46678999999985 68999987643
No 199
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-36 Score=329.13 Aligned_cols=205 Identities=26% Similarity=0.346 Sum_probs=170.7
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCC---------hhcccceEEEEcc
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---------QETFARISGYCEQ 909 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~---------~~~~~~~~gy~~Q 909 (1085)
+++..+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++. ....++.++|++|
T Consensus 12 ~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q 89 (242)
T PRK11124 12 YGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQ 89 (242)
T ss_pred ECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecccccccchhhHHHHHhheEEEec
Confidence 344579999999999999999999999999999999999876 56899999998642 1234567999999
Q ss_pred CCCCCCCCCHHHHHHHhh-hhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 001400 910 NDIHSPGLTVLESLLFSA-WLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1085)
Q Consensus 910 ~~~~~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ 988 (1085)
++.+++.+|+.||+.+.. ... ..........+.++++.+++.+..+... ..||+|||||++|||||+.+|+
T Consensus 90 ~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~ 161 (242)
T PRK11124 90 QYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP-----LHLSGGQQQRVAIARALMMEPQ 161 (242)
T ss_pred CccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999997532 111 1122233456788899999876665543 5799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 989 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 162 llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 226 (242)
T PRK11124 162 VLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-GHIVEQGDAS 226 (242)
T ss_pred EEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999999998777999999999986 46678999999985 7888888754
No 200
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-36 Score=346.92 Aligned_cols=205 Identities=24% Similarity=0.297 Sum_probs=174.1
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh---c----ccceEEEEccCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T----FARISGYCEQND 911 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gy~~Q~~ 911 (1085)
++...+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++... . .++.+||++|++
T Consensus 38 ~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~ 115 (400)
T PRK10070 38 TGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSF 115 (400)
T ss_pred cCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCC
Confidence 345568999999999999999999999999999999999876 5689999999876421 1 235799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++.+||+||+.|....+. .......+.++++++.+++.+..+... .+||||||||++|||||+.+|+|||
T Consensus 116 ~l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLL 187 (400)
T PRK10070 116 ALMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILL 187 (400)
T ss_pred cCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999998754332 222334456788999999987766543 5799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 188 LDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~~ 250 (400)
T PRK10070 188 MDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTPD 250 (400)
T ss_pred EECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCHH
Confidence 9999999999999999999999875 5899999999986 57788999999985 7898888654
No 201
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.5e-36 Score=328.77 Aligned_cols=214 Identities=26% Similarity=0.370 Sum_probs=173.1
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 46999999999999999999999999999999999998876 9999999998765432 3469999999998999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.+.....+...... .. . ... .......++++++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~~~~----~~------~-~~~-------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (236)
T cd03219 90 LTVLENVMVAAQARTGSGLLL----AR------A-RRE-------------EREARERAEELLERVGLADLADRPA---- 141 (236)
T ss_pred CCHHHHHHHHHhhcccccccc----cc------c-ccc-------------HHHHHHHHHHHHHHcCccchhhCCh----
Confidence 999999988654321100000 00 0 000 0011234778899999987666554
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
+.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++ . +++|+.++|+.+++.+++|++++|++
T Consensus 142 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 142 -GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999999875 3 44566688889999999999999999
Q ss_pred CeEEEecChhhH
Q 001400 384 GQIVYQGPRVSV 395 (1085)
Q Consensus 384 G~iv~~G~~~~~ 395 (1085)
|++++.|+++++
T Consensus 219 G~i~~~~~~~~~ 230 (236)
T cd03219 219 GRVIAEGTPDEV 230 (236)
T ss_pred CEEEeecCHHHh
Confidence 999999988765
No 202
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-36 Score=330.89 Aligned_cols=208 Identities=26% Similarity=0.304 Sum_probs=167.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|.++.. ..+++.+||++|++
T Consensus 23 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 102 (258)
T PRK14268 23 GEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKP 102 (258)
T ss_pred CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCC
Confidence 445799999999999999999999999999999999997642 1358999999987532 23456799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++ .|++||+.|....+. .......+.++++++.+++.+........ .+..||+|||||++|||||+.+|+|||
T Consensus 103 ~~~~-~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LSgG~~qrv~laral~~~p~lll 177 (258)
T PRK14268 103 NPFP-MSIYDNVAYGPRIHG---ANKKDLDGVVENALRSAALWDETSDRLKS-PALSLSGGQQQRLCIARTLAVKPKIIL 177 (258)
T ss_pred ccCc-ccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcchhhhhcC-ChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 8877 899999988643221 12233345578889988874321111111 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+++.|+++. +|+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 178 lDEPt~~LD~~~~~~l~~~l~~l~-~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 238 (258)
T PRK14268 178 FDEPTSALDPISTARIEDLIMNLK-KDYTIVIVTHNMQ-QAARISDYTGFFLM-GELIEFGQTR 238 (258)
T ss_pred EeCCCcccCHHHHHHHHHHHHHHh-hCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999999999986 4899999999986 46678999999984 7899988753
No 203
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.8e-36 Score=330.42 Aligned_cols=205 Identities=24% Similarity=0.319 Sum_probs=171.5
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----------------hcccce
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----------------ETFARI 903 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~ 903 (1085)
++..+|+||||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (252)
T TIGR03005 11 GILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNK 88 (252)
T ss_pred CCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccccccchhHHHHHhhC
Confidence 44579999999999999999999999999999999999876 468999999986532 134667
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHH
Q 001400 904 SGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVEL 983 (1085)
Q Consensus 904 ~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL 983 (1085)
++|++|++.+++..|+.||+.+..... .........+.++++++.+++.+..+.. +..||+|||||++|||||
T Consensus 89 i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~laral 161 (252)
T TIGR03005 89 IGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM-----PAQLSGGQQQRVAIARAL 161 (252)
T ss_pred eEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC-----hhhcCHHHHHHHHHHHHH
Confidence 999999999889999999998753211 1122233445678899999987665543 257999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 984 VANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 984 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|++ |++++.|+..
T Consensus 162 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 232 (252)
T TIGR03005 162 AMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFDK-GRIVEQGKPD 232 (252)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999999999999998764 899999999986 46678999999985 7898888754
No 204
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=335.98 Aligned_cols=201 Identities=25% Similarity=0.325 Sum_probs=170.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~-~~~~~ 917 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 459999999999999999999999999999999999876 568999999987642 335668999999974 56778
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
||+||+.|+.... .....+..+.++++++.+++.+..+... ..||+|||||++|||||+.+|+||+|||||+
T Consensus 98 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~ 169 (279)
T PRK13650 98 TVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSGGQKQRVAIAGAVAMRPKIIILDEATS 169 (279)
T ss_pred cHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcc
Confidence 9999998864322 2233444566889999999987666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+.++..+++.|++++++ |+|||++||+++ .+ ..||++++|++ |+++..|+..
T Consensus 170 ~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~~g~~~ 225 (279)
T PRK13650 170 MLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVESTSTPR 225 (279)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEEECCHH
Confidence 99999999999999999865 999999999986 34 67999999975 7899888754
No 205
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.6e-36 Score=328.25 Aligned_cols=210 Identities=21% Similarity=0.284 Sum_probs=167.6
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcc-cceEEEEccCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETF-ARISGYCEQNDIHS 914 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~-~~~~gy~~Q~~~~~ 914 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|.....+.+|+|.++|.+... ... +..++|++|++.++
T Consensus 10 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 10 VEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred ECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 34567999999999999999999999999999999999974111568999999987543 122 33489999999999
Q ss_pred CCCCHHHHHHHhhhhcCCC----cccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 915 PGLTVLESLLFSAWLRLPS----EIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
+.+|++|++.+........ ........+.++++++.+++. ...+.... ..||+|||||++|||||+.+|++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~l 165 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKL 165 (243)
T ss_pred CCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCE
Confidence 9999999998754321110 011222345678889999986 34443321 24999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHh-cCEEEEEecCcEEEEecCC
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~il~l~~gG~~~~~g~~ 1054 (1085)
|||||||+|||+.++..+.+.|+++.++|.|||++||+++ .+... +|++++|++ |++++.|+.
T Consensus 166 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~i~~~g~~ 229 (243)
T TIGR01978 166 AILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GRIVKSGDV 229 (243)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CEEEEecCH
Confidence 9999999999999999999999999777899999999986 35566 799999985 788888764
No 206
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.1e-36 Score=340.09 Aligned_cols=205 Identities=22% Similarity=0.274 Sum_probs=171.5
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCC--C
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--I 912 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~--~ 912 (1085)
...+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++ .
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 3579999999999999999999999999999999999876 468999999987642 12456799999997 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
++|.+|+.||+.+......+ .....+.++.+.++++.+++. ...+.. +.+||||||||++|||||+.+|++||
T Consensus 111 l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p~~LSgG~~QRv~iArAL~~~P~lli 184 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----PHEFSGGQCQRIGIARALILEPKLII 184 (331)
T ss_pred cCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 78899999999876433211 123344556778999999984 334443 35899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+||||+|||+.++..+++.|+++.++ |.|||+||||++ .+.+.+|++++|.+ |++++.|+..
T Consensus 185 lDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~-G~ive~g~~~ 247 (331)
T PRK15079 185 CDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL-GHAVELGTYD 247 (331)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 99999999999999999999999764 999999999986 46678999999985 7999998754
No 207
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-36 Score=328.88 Aligned_cols=212 Identities=24% Similarity=0.288 Sum_probs=169.9
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCCh---hcccceEEEEccCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ---ETFARISGYCEQNDI 912 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~ 912 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.++.. ..+++.+||++|++.
T Consensus 13 ~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~ 92 (250)
T PRK14247 13 FGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPN 92 (250)
T ss_pred ECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCc
Confidence 34457999999999999999999999999999999999976421 368999999987642 345667999999998
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+++.+|+.||+.+....+... ....+..+.++++++.+++.+....... ..+.+||||||||++|||||+.+|+||+|
T Consensus 93 ~~~~~tv~enl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgG~~qrv~laral~~~p~lllL 170 (250)
T PRK14247 93 PIPNLSIFENVALGLKLNRLV-KSKKELQERVRWALEKAQLWDEVKDRLD-APAGKLSGGQQQRLCIARALAFQPEVLLA 170 (250)
T ss_pred cCCCCcHHHHHHHHHHhcccc-CCHHHHHHHHHHHHHHcCCCcchhhhhc-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 888999999998764322110 1223334567889999988542111111 11357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||+|||+.++..+.+.|+++. +|+|||++||+++ .+.+.+|++++|++ |+++..|+..
T Consensus 171 DEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 230 (250)
T PRK14247 171 DEPTANLDPENTAKIESLFLELK-KDMTIVLVTHFPQ-QAARISDYVAFLYK-GQIVEWGPTR 230 (250)
T ss_pred cCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhcCEEEEEEC-CeEEEECCHH
Confidence 99999999999999999999985 4899999999986 46778999999985 7888888754
No 208
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-36 Score=330.68 Aligned_cols=205 Identities=26% Similarity=0.390 Sum_probs=170.8
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSP 915 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~ 915 (1085)
+++..+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 12 ~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (258)
T PRK13548 12 LGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLADWSPAELARRRAVLPQHSSLSF 89 (258)
T ss_pred eCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcccCCHHHhhhheEEEccCCcCCC
Confidence 345679999999999999999999999999999999999865 568999999986532 234567999999988878
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHh------cCCCE
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV------ANPSI 989 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~------~~p~i 989 (1085)
.+|++||+.+...... .........++++++.+++.+..+... ..||||||||++|||||+ .+|++
T Consensus 90 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe~qrv~la~al~~~~~~~~~p~l 161 (258)
T PRK13548 90 PFTVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGEQQRVQLARVLAQLWEPDGPPRW 161 (258)
T ss_pred CCCHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhcccccCCCCCE
Confidence 8999999987532111 111223345788999999977665543 579999999999999999 59999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHH-HCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+|||||+|||+.++..+.+.|+++. ++|.|||++||+++ .+...||++++|++ |++++.|+..
T Consensus 162 llLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 226 (258)
T PRK13548 162 LLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-GRLVADGTPA 226 (258)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-CEEEeeCCHH
Confidence 99999999999999999999999987 57999999999986 46778999999985 6888888754
No 209
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.7e-36 Score=324.45 Aligned_cols=195 Identities=25% Similarity=0.383 Sum_probs=162.4
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-------CCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~d~~ 220 (1085)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999998876 999999998875432 13579999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++.+||+||+.++....+... ......++++++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999988654321100 000123678899999987666554
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++. ++|++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEA-GTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHh-hhcEEEE
Confidence 4699999999999999999999999999999999999999999999987533 445666778888876 9999999
Q ss_pred ecCCeE
Q 001400 381 LSEGQI 386 (1085)
Q Consensus 381 L~~G~i 386 (1085)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 210
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.5e-36 Score=326.71 Aligned_cols=204 Identities=21% Similarity=0.342 Sum_probs=171.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999998876 9999999987754321 2469999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.+.....+... ......++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 131 (232)
T cd03218 90 LTVEENILAVLEIRGLSK----------------------------------KEREEKLEELLEEFHITHLRKSKA---- 131 (232)
T ss_pred CcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh----
Confidence 999999987543221000 001124678899999987766654
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++.+++|++++|++
T Consensus 132 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 132 -SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDR--GIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999988752 45566688888899999999999999
Q ss_pred CeEEEecChhhH
Q 001400 384 GQIVYQGPRVSV 395 (1085)
Q Consensus 384 G~iv~~G~~~~~ 395 (1085)
|++++.|+.+++
T Consensus 209 G~i~~~~~~~~~ 220 (232)
T cd03218 209 GKVLAEGTPEEI 220 (232)
T ss_pred CeEEEEeCHHHh
Confidence 999999988765
No 211
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-36 Score=321.89 Aligned_cols=194 Identities=27% Similarity=0.379 Sum_probs=162.4
Q ss_pred eeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHHHHH
Q 001400 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLESLLF 925 (1085)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gy~~Q~~~~~~~~tv~e~l~~ 925 (1085)
|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 5689999999876431 234679999999998899999999987
Q ss_pred hhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHH
Q 001400 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1085)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~ 1005 (1085)
....+. .. ....++.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 532111 11 1223456788999999977665543 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 1006 IVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 1006 ~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
.+++.|+++++ .|.|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999875 4899999999986 46678999999985 6777543
No 212
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2.6e-35 Score=322.55 Aligned_cols=169 Identities=24% Similarity=0.303 Sum_probs=133.2
Q ss_pred eEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHhhh
Q 001400 849 TGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAW 928 (1085)
Q Consensus 849 s~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~ 928 (1085)
.++|..||+++++||||-||||+.++|+|..+ +.+|+ .. .-.++|-||--.-....||.+.+.-...
T Consensus 361 ~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~~~~ 427 (591)
T COG1245 361 EGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRSAIR 427 (591)
T ss_pred CCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHHHhhh
Confidence 35778899999999999999999999999766 45665 11 1246788886544467899997753221
Q ss_pred hcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHH
Q 001400 929 LRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVM 1008 (1085)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~ 1008 (1085)
-+.. ..-+..++.+-++|..+.+..+ .+|||||.|||+||.+|.++.++.+||||++.||.+.+-.+-
T Consensus 428 ~~~~-------~s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~va 495 (591)
T COG1245 428 SAFG-------SSYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVA 495 (591)
T ss_pred hhcc-------cchhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHH
Confidence 1111 1123457888888888887765 479999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEe
Q 001400 1009 RTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1085)
Q Consensus 1009 ~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~ 1043 (1085)
+.||++.. .++|.+++-||..+ +--..||++|..
T Consensus 496 kvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 496 KVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 99999975 58999999999764 445578888875
No 213
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4.3e-36 Score=331.83 Aligned_cols=222 Identities=27% Similarity=0.360 Sum_probs=176.7
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC-eeeeEEEEcCccCCh--------hcccceEEEEcc
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQ--------ETFARISGYCEQ 909 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~~~~--------~~~~~~~gy~~Q 909 (1085)
+++..+|+|+||++++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.++.. ...++.++|++|
T Consensus 14 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q 93 (262)
T PRK09984 14 FNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQ 93 (262)
T ss_pred eCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEcc
Confidence 34567999999999999999999999999999999999986532 236999999987532 223567999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCC-----cccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHh
Q 001400 910 NDIHSPGLTVLESLLFSAWLRLPS-----EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV 984 (1085)
Q Consensus 910 ~~~~~~~~tv~e~l~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~ 984 (1085)
++.+++.+|++||+.+......+. ..........++++++.+++.+..+... ..||+|||||++|||||+
T Consensus 94 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~ 168 (262)
T PRK09984 94 QFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV-----STLSGGQQQRVAIARALM 168 (262)
T ss_pred ccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc-----cccCHHHHHHHHHHHHHh
Confidence 999889999999998753210000 0111233456788999999976665543 579999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc-hHHHH
Q 001400 985 ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK-SCELI 1062 (1085)
Q Consensus 985 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~-~~~~~ 1062 (1085)
.+|++|||||||+|||+.++..+++.|+++.+ .|.|||++||+++ .+.+.+|++++|.+ |++++.|+..+. ...+.
T Consensus 169 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-g~i~~~g~~~~~~~~~~~ 246 (262)
T PRK09984 169 QQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIVALRQ-GHVFYDGSSQQFDNERFD 246 (262)
T ss_pred cCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHHHhccHHHH
Confidence 99999999999999999999999999999975 4899999999986 47788999999985 688888876542 22344
Q ss_pred HHHHh
Q 001400 1063 KYFEV 1067 (1085)
Q Consensus 1063 ~~~~~ 1067 (1085)
+.|..
T Consensus 247 ~~~~~ 251 (262)
T PRK09984 247 HLYRS 251 (262)
T ss_pred HHHhh
Confidence 44544
No 214
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.5e-36 Score=326.20 Aligned_cols=204 Identities=27% Similarity=0.335 Sum_probs=167.2
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh----cccceEEEEccCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHS 914 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gy~~Q~~~~~ 914 (1085)
+++..+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.++
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 87 (230)
T TIGR03410 10 YGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIF 87 (230)
T ss_pred eCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCccc
Confidence 345679999999999999999999999999999999999876 5689999999875421 1345799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcC-CCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-LTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
+.+|++||+.+....+.. . ..+..+++++.++ +.+..+.. +..||+|||||++|||||+.+|++|+||
T Consensus 88 ~~~tv~~~l~~~~~~~~~---~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlD 156 (230)
T TIGR03410 88 PRLTVEENLLTGLAALPR---R---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLD 156 (230)
T ss_pred CCCcHHHHHHHHHHhcCc---c---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEec
Confidence 999999999876432211 1 1223466777765 34444443 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~ 1057 (1085)
|||+|||+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+..+.
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~~~~~~~ 219 (230)
T TIGR03410 157 EPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVASGAGDEL 219 (230)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHHHc
Confidence 999999999999999999998764 899999999986 46668999999985 789998886543
No 215
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-36 Score=327.51 Aligned_cols=204 Identities=25% Similarity=0.369 Sum_probs=172.0
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC------CceEEEEccCCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQVA 222 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 222 (1085)
++|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999876 9999999998754321 357999999999899
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
.+||+||+.+.....+... ......++++++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 9999999987643221100 000123677899999987766554
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINREL-GLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999987543 4556667888889999999999999
Q ss_pred CCeEEEecChhhH
Q 001400 383 EGQIVYQGPRVSV 395 (1085)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1085)
+|++++.|+.+++
T Consensus 216 ~G~i~~~~~~~~~ 228 (233)
T cd03258 216 KGEVVEEGTVEEV 228 (233)
T ss_pred CCEEEEecCHHHH
Confidence 9999999987765
No 216
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=5.1e-36 Score=342.36 Aligned_cols=206 Identities=21% Similarity=0.309 Sum_probs=175.2
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCc----cCCh---h---cc-cceEEEE
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY----PKRQ---E---TF-ARISGYC 907 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~----~~~~---~---~~-~~~~gy~ 907 (1085)
++...+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|+++|. ++.. . .+ ++.++|+
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 456789999999999999999999999999999999999876 56899999996 3221 1 12 2579999
Q ss_pred ccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 908 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 908 ~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
+|++.+++.+||+||+.|+...+ .....+..+.++++++.++|.+..+... .+||||||||++|||||+.+|
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999875433 1233445567889999999987766643 479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
+||||||||+|||+.++..+++.|+++.++ |+|||++|||++ ++.+.+|++++|++ |+++..|+..+
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~e 251 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPEE 251 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHHH
Confidence 999999999999999999999999999764 999999999987 47788999999985 78999887643
No 217
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-36 Score=346.59 Aligned_cols=200 Identities=30% Similarity=0.436 Sum_probs=166.7
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1085)
++++|+|++++||+.++|+|+||||||||+++|+|+++++ +|+|.+||.+..+.. ++++++||+|++.+|+ .|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6999999999999999999999999999999999999886 999999999987765 5689999999998666 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCC------cccccccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL------DTCADTLV 299 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~v 299 (1085)
+||||.++.... . ++.+.++++.-|| +...||.+
T Consensus 411 ireNi~l~~~~~----s------------------------------------~e~i~~al~~a~l~~~v~~p~GLdt~i 450 (559)
T COG4988 411 IRENILLARPDA----S------------------------------------DEEIIAALDQAGLLEFVPKPDGLDTVI 450 (559)
T ss_pred HHHHhhccCCcC----C------------------------------------HHHHHHHHHHhcHHHhhcCCCcccchh
Confidence 999999863210 0 0112233333333 45779999
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
|+ ..++|||||+|||++|||++.+++++++||||++||..|...|.+.|.++++ ++|+++ ++|.. +...-+|+|+
T Consensus 451 ge-~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itHrl-~~~~~~D~I~ 525 (559)
T COG4988 451 GE-GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITHRL-EDAADADRIV 525 (559)
T ss_pred cc-CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEcCh-HHHhcCCEEE
Confidence 96 4678999999999999999999999999999999999999999999999986 345554 55554 4556789999
Q ss_pred EecCCeEEEecChhhHHH
Q 001400 380 LLSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~~ 397 (1085)
+|++|+++++|.++++.+
T Consensus 526 vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 526 VLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EecCCceeccCCHHHHhh
Confidence 999999999999998853
No 218
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-36 Score=323.20 Aligned_cols=200 Identities=30% Similarity=0.389 Sum_probs=168.4
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1085)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999998776 9999999988753 346799999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccC
Q 001400 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1085)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1085)
||+.++....+... ......++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99988643321100 000123678899999987766654 469
Q ss_pred chhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec--CCe
Q 001400 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS--EGQ 385 (1085)
Q Consensus 308 SGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~--~G~ 385 (1085)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRET-GKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999999999999999886533 4456667888889999999999999 799
Q ss_pred EEEecCh
Q 001400 386 IVYQGPR 392 (1085)
Q Consensus 386 iv~~G~~ 392 (1085)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988764
No 219
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.7e-36 Score=322.15 Aligned_cols=199 Identities=31% Similarity=0.399 Sum_probs=167.7
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-CCceEEEEccCCCCCCCCCHH
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVR 227 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~ 227 (1085)
++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 5999999999999999999999999999999999998776 999999998875432 235799999999888899999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccC
Q 001400 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1085)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1085)
||+.+.....+... .+....++++++.+||++..+..+ +.|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKP-----KQL 131 (213)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCCh-----hhC
Confidence 99988643321100 001123677899999987777655 469
Q ss_pred chhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEE
Q 001400 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1085)
Q Consensus 308 SGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv 387 (1085)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLG-TTTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999876433 45666778889999999999999999999
Q ss_pred Eec
Q 001400 388 YQG 390 (1085)
Q Consensus 388 ~~G 390 (1085)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 220
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=6.7e-36 Score=338.56 Aligned_cols=213 Identities=20% Similarity=0.258 Sum_probs=175.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-------CceEEEEccCC--
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQD-- 218 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d-- 218 (1085)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++....+|+|.++|.++..... .+.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999987642348999999998765431 24799999997
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccc
Q 001400 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1085)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1085)
.+.+.+||.+++.+......... . .+...++.++|+.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~---------~------------------------~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMS---------K------------------------AEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC---------H------------------------HHHHHHHHHHHHHcCCCChHHH-
Confidence 67899999999976543221000 0 0012246778899999764332
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
. +..+.+|||||||||+||+||+.+|++|++||||+|||..++.+|.+.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF-NTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEECCHHHHHHhCCEE
Confidence 2 35667899999999999999999999999999999999999999999999987643 466777899999999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 001400 379 ILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~ 396 (1085)
++|++|++++.|+.+++.
T Consensus 233 ~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVF 250 (330)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998875
No 221
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.6e-36 Score=326.52 Aligned_cols=203 Identities=24% Similarity=0.325 Sum_probs=168.4
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhh-----CCCCceeeEEEECCccCCCCC-----CCceEEEEccCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL-----GHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQD 218 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l-----~~~~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d 218 (1085)
++|+|+|++|++|++++|+||||||||||+++|+|.+ ++. +|+|.++|.++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 6999999999999999999999999999999999998 554 999999998865432 245799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccc
Q 001400 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1085)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1085)
.++ .+||+||+.++....+.... .....+++++++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhcc
Confidence 877 79999999886543211000 00112367789999998766554
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
+. +..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. ++|+.++|+.+++.+++|++
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~---~tii~~sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE---YTIVIVTHNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC---cEEEEEeccHHHHHHhCCEE
Confidence 30 3579999999999999999999999999999999999999999999998653 56666888999999999999
Q ss_pred EEecCCeEEEecChhh
Q 001400 379 ILLSEGQIVYQGPRVS 394 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~ 394 (1085)
++|++|++++.|++++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998654
No 222
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.8e-36 Score=339.06 Aligned_cols=205 Identities=25% Similarity=0.366 Sum_probs=176.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1085)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999998876 999999998875421 2457999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.|.++..+... .+...+++++++.+||++..++.+ +
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~ 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKI-----G 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCch-----h
Confidence 9999998665432110 001224778899999998887765 4
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.|||||||||+||+||+++|++|+|||||+|||+.++.++++.|++++. + ++|+.++|..+++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--D-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998853 4 566778899999999999999999999
Q ss_pred EEEecChhhHHH
Q 001400 386 IVYQGPRVSVLD 397 (1085)
Q Consensus 386 iv~~G~~~~~~~ 397 (1085)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999988754
No 223
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=333.61 Aligned_cols=201 Identities=24% Similarity=0.332 Sum_probs=169.4
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCCC-CCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDI-HSPG 916 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~~-~~~~ 916 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .+..
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 469999999999999999999999999999999999866 568999999987642 234567999999975 3567
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
.|+.||+.|..... ........+.++++++.+++.+..+... ..||+|||||++|||||+.+|+||||||||
T Consensus 93 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt 164 (274)
T PRK13644 93 RTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSGGQGQCVALAGILTMEPECLIFDEVT 164 (274)
T ss_pred chHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998764322 1223334456788999999987666543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||+.++..+++.|+++.++|.|||++||+++ ++ +.+|++++|++ |++++.|+..
T Consensus 165 ~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~g~~~ 220 (274)
T PRK13644 165 SMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLEGEPE 220 (274)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999998777999999999986 34 66999999985 6888888754
No 224
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=337.15 Aligned_cols=218 Identities=23% Similarity=0.327 Sum_probs=175.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-------CCCceEEEEccCCC-
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDW- 219 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------~~~~~~~yv~Q~d~- 219 (1085)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 35999999999999999999999999999999999998876 99999999987531 12357999999862
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-cccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1085)
.+...||+||+.|+....+... .+...+++++++.+||. ...++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 3445799999998644321100 00112478889999996 455654
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++... +++|+.++|+.+++.+++|+|
T Consensus 143 ~-----~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~-g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 P-----FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEK-GLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEE
Confidence 4 5699999999999999999999999999999999999999999999987643 456666889999999999999
Q ss_pred EEecCCeEEEecChhhHH---HHHHhCCCCCCC
Q 001400 379 ILLSEGQIVYQGPRVSVL---DFFASMGFSCPK 408 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~---~~f~~~G~~~p~ 408 (1085)
++|++|++++.|+++++. ..+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 999999999999988764 223344544443
No 225
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-36 Score=332.00 Aligned_cols=208 Identities=28% Similarity=0.395 Sum_probs=171.0
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCC---hhcccceEEEEccCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---QETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~---~~~~~~~~gy~~Q~~~~~~~ 916 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++. ...+++.++|++|++.+++.
T Consensus 22 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (265)
T PRK10575 22 PGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEG 99 (265)
T ss_pred CCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEehhhCCHHHHhhheEEeccCCCCCCC
Confidence 44679999999999999999999999999999999999866 56899999998753 23345679999999888888
Q ss_pred CCHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 917 LTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
+|+.||+.+....... .........+.++++++.+++.+..+... ..||||||||++|||||+.+|+|||||||
T Consensus 100 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~lllLDEP 174 (265)
T PRK10575 100 MTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSGGERQRAWIAMLVAQDSRCLLLDEP 174 (265)
T ss_pred ccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999875321100 00111223455788999999876555543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.+|++++|++ |+++..|+..+
T Consensus 175 t~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~~~~~~~ 234 (265)
T PRK10575 175 TSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIAQGTPAE 234 (265)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecCHHH
Confidence 9999999999999999998765 899999999986 47788999999985 78888887543
No 226
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-36 Score=323.44 Aligned_cols=201 Identities=20% Similarity=0.305 Sum_probs=166.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1085)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|+++|.++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999998776 9999999998765432 2569999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++.+||+||+.+.....+... .+.+.+++++++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 999999999988643221000 001224678899999987666554
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
..|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQ-GTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhC-CCEEEEEeCCHHHHHh-hCEEEE
Confidence 4699999999999999999999999999999999999999999999986533 4556667788888766 589999
Q ss_pred ecCCeEEEecCh
Q 001400 381 LSEGQIVYQGPR 392 (1085)
Q Consensus 381 L~~G~iv~~G~~ 392 (1085)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 227
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=345.91 Aligned_cols=206 Identities=20% Similarity=0.281 Sum_probs=175.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1085)
..+|+|+|++|++||+++|+|||||||||||++|+|+++|. +|+|.++|.++..... ++.++||+|++.+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 46899999999999999999999999999999999999876 9999999998765432 3479999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++.+||+||+.|+....+... .+...+++++++.+||++..++.+
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc-
Confidence 999999999998754332110 001124678899999987766554
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++..++|+|++
T Consensus 163 ----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 163 ----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEEE
Confidence 5699999999999999999999999999999999999999999999987543 44566688999999999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999988764
No 228
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.8e-36 Score=323.28 Aligned_cols=198 Identities=28% Similarity=0.435 Sum_probs=166.6
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC--CCCceEEEEccCCCCCCCCCH
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV 226 (1085)
++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999998876 99999999887532 124679999999988898999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.+.....+... ......++++++.+||++..+..+ ..
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 999987543221100 001224678899999987776654 46
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. +.+++.++|+.+++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRAL--GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998642 44566688888999999999999999999
Q ss_pred EEec
Q 001400 387 VYQG 390 (1085)
Q Consensus 387 v~~G 390 (1085)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 229
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.2e-36 Score=324.31 Aligned_cols=203 Identities=29% Similarity=0.426 Sum_probs=171.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC--CCCceEEEEccCCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 225 (1085)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999998876 99999999887532 12456999999998888999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.+..+..+... + .....++++++.+||++..++.+ .
T Consensus 92 v~~~l~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 132 (220)
T cd03263 92 VREHLRFYARLKGLPK--S--------------------------------EIKEEVELLLRVLGLTDKANKRA-----R 132 (220)
T ss_pred HHHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHcCCHHHHhChh-----h
Confidence 9999988654322100 0 00123677899999987777655 4
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + ++++.++|+.+++.+++|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 566668888889999999999999999
Q ss_pred EEEecChhhH
Q 001400 386 IVYQGPRVSV 395 (1085)
Q Consensus 386 iv~~G~~~~~ 395 (1085)
+++.|+.+++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999987653
No 230
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-36 Score=328.38 Aligned_cols=210 Identities=26% Similarity=0.273 Sum_probs=168.9
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCC-----hhcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-----QETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~-----~~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.++. ...+++.++|++|++
T Consensus 15 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 94 (253)
T PRK14267 15 GSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYP 94 (253)
T ss_pred CCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCC
Confidence 4457999999999999999999999999999999999986532 35899999998763 123456799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
.+++.+|+.||+.+....+.. ........+.++++++.+++... .+.... .+..||+|||||++|||||+.+|++|
T Consensus 95 ~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~~~LS~G~~qrv~laral~~~p~ll 171 (253)
T PRK14267 95 NPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLND--YPSNLSGGQRQRLVIARALAMKPKIL 171 (253)
T ss_pred ccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhcc--ChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999876432211 01122334457788888887532 111111 13579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+...+|++++|++ |++++.|+..
T Consensus 172 llDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 233 (253)
T PRK14267 172 LMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL-GKLIEVGPTR 233 (253)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999999864 799999999986 46778999999985 7899888754
No 231
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-36 Score=296.79 Aligned_cols=201 Identities=28% Similarity=0.392 Sum_probs=177.6
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e 921 (1085)
..+|+|+|++|.+||.++++|||||||||||++++|..+ +..|+|.+||.++..... .-|.|+|++.++|-+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 348999999999999999999999999999999999887 568999999998754322 2389999999999999999
Q ss_pred HHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCH
Q 001400 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1085)
Q Consensus 922 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~ 1001 (1085)
|+.|+..++ .+.+.++.+.+.+.+..++|.+..++.+ .+||||||||+.|||||+.+|+.|+||||+++||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998877 4567888889999999999998887654 58999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecC-cEEEEecCCC
Q 001400 1002 RAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG-GELIYAGPLG 1055 (1085)
Q Consensus 1002 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~g-G~~~~~g~~~ 1055 (1085)
-+++.++++|-++.+ +|+.+++|||+.+. ..-.+++++||..| |+++..-+++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ieE-AlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIEE-ALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHHH-HHhhhheeEEecCCCceeeEecCCC
Confidence 999999999999875 69999999999874 44467999999854 7888877764
No 232
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.2e-35 Score=329.02 Aligned_cols=207 Identities=21% Similarity=0.342 Sum_probs=172.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1085)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35999999999999999999999999999999999998876 999999998775432 135699999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||.||+.+....... .+ .. .....+..+++.+||++..++.+
T Consensus 97 ~~~tv~enl~~~~~~~~~---~~------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~-- 141 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---LP------AP------------------------LLHSTVMMKLEAVGLRGAAKLMP-- 141 (269)
T ss_pred CCCCHHHHHHHHHHHccC---CC------HH------------------------HHHHHHHHHHHHcCChhhhhCCh--
Confidence 999999999875321100 00 00 00123677889999988777655
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|
T Consensus 142 ---~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 142 ---SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSAL-GVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhhCEEEEE
Confidence 4699999999999999999999999999999999999999999999987533 455666889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999987764
No 233
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-36 Score=332.07 Aligned_cols=202 Identities=25% Similarity=0.355 Sum_probs=169.8
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~-~~~~~ 917 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.+||++|++. .+...
T Consensus 17 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 17 KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 459999999999999999999999999999999999866 568999999987542 345667999999974 33467
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
||.||+.+..... ........+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|||||||+
T Consensus 95 tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrl~laraL~~~p~llilDEPt~ 166 (277)
T PRK13652 95 TVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTA 166 (277)
T ss_pred cHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998764322 1233334456788999999977666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+.++..+.+.++++.++ |.|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 167 gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~g~~~ 223 (277)
T PRK13652 167 GLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAYGTVE 223 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEECCHH
Confidence 99999999999999999765 899999999986 47788999999985 6889988754
No 234
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=335.79 Aligned_cols=205 Identities=25% Similarity=0.358 Sum_probs=169.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC----------------------
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF---------------------- 205 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~---------------------- 205 (1085)
..+|+|+|+.|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999876 89999998754210
Q ss_pred -----CCCceEEEEccCC-CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchh
Q 001400 206 -----VPPRTSAYVSQQD-WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTS 279 (1085)
Q Consensus 206 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~ 279 (1085)
..++.++||+|++ ..+...||+|||.|+....+... ....
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 1245799999985 34556799999998654322100 0012
Q ss_pred HHHHHHHHHhCCc-ccccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCC
Q 001400 280 LVVEYIMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDG 358 (1085)
Q Consensus 280 ~~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~ 358 (1085)
.+++++++.+||+ +..++. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 2477889999996 555554 457999999999999999999999999999999999999999999999874 3 4
Q ss_pred EEEEEEecChhHHHhhcCeEEEecCCeEEEecChhhHH
Q 001400 359 TTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 359 t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G~~~~~~ 396 (1085)
++|+.++|+.+++.+++|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 55666889999999999999999999999999988864
No 235
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-36 Score=333.26 Aligned_cols=201 Identities=27% Similarity=0.335 Sum_probs=169.8
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~-~~~~~ 917 (1085)
+.+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 469999999999999999999999999999999999876 468999999987643 234567999999974 56678
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
||.||+.+..... .....+..+.++++++.++|.+..+... ..||+|||||++|||||+.+|+||||||||+
T Consensus 98 tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt~ 169 (279)
T PRK13635 98 TVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGGQKQRVAIAGVLALQPDIIILDEATS 169 (279)
T ss_pred cHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998764332 1223344556789999999987666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+.++..+++.|+++.++ |.|||++||+++. + ..+|++++|.+ |++++.|+..
T Consensus 170 gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~i~~l~~-G~i~~~g~~~ 225 (279)
T PRK13635 170 MLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADRVIVMNK-GEILEEGTPE 225 (279)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCEEEEEEC-CEEEEECCHH
Confidence 99999999999999999875 8999999999863 4 46999999985 6889988754
No 236
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.3e-36 Score=343.31 Aligned_cols=209 Identities=27% Similarity=0.423 Sum_probs=175.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1085)
+++|+|+|+.|++||+++|+||||||||||||+|+|.++|. +|+|.++|.++.... .++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999876 999999999876543 246799999999888999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||+||+.++..... .++.. . ......+++++++.+||.+..++.+
T Consensus 93 tv~e~v~~~~~~~~--~~~~~-------------~---------------~~~~~~~v~~~le~vgl~~~~~~~~----- 137 (402)
T PRK09536 93 DVRQVVEMGRTPHR--SRFDT-------------W---------------TETDRAAVERAMERTGVAQFADRPV----- 137 (402)
T ss_pred CHHHHHHhccchhc--ccccC-------------C---------------CHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999988532110 00000 0 0011235788999999988777654
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
+.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++++ . +++|+.++|+.+++.++||++++|++|
T Consensus 138 ~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 138 TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999975 3 456666889999999999999999999
Q ss_pred eEEEecChhhHH
Q 001400 385 QIVYQGPRVSVL 396 (1085)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1085)
++++.|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998764
No 237
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-36 Score=320.99 Aligned_cols=198 Identities=25% Similarity=0.377 Sum_probs=167.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1085)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 36999999999999999999999999999999999998776 9999999987653 2346799999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccC
Q 001400 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1085)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1085)
||+.+.....+... ......++++++.+||++..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EEL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhC
Confidence 99987643321100 001123677899999987776654 469
Q ss_pred chhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEE
Q 001400 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1085)
Q Consensus 308 SGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv 387 (1085)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +.+|+.++|+.+++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARA--GKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999988653 456666889999999999999999999998
Q ss_pred Eec
Q 001400 388 YQG 390 (1085)
Q Consensus 388 ~~G 390 (1085)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 238
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-36 Score=330.99 Aligned_cols=208 Identities=24% Similarity=0.346 Sum_probs=171.8
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~ 916 (1085)
++..+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.
T Consensus 18 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~ 95 (265)
T PRK10253 18 GKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGD 95 (265)
T ss_pred CCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCC
Confidence 45679999999999999999999999999999999999876 468999999987532 2345679999999988888
Q ss_pred CCHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 917 LTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.|++||+.+......+ .....+.....++++++.+++.+..+... ..||+|||||++|||||+.+|++|+||||
T Consensus 96 ~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEP 170 (265)
T PRK10253 96 ITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSGGQRQRAWIAMVLAQETAIMLLDEP 170 (265)
T ss_pred CcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCChHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 9999999875211100 00011223456788999999976655543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|+|||+.++..+.+.|+++.++ |.|||++||+++ .+.+.+|++++|++ |++++.|+..+
T Consensus 171 t~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~~ 230 (265)
T PRK10253 171 TTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVAQGAPKE 230 (265)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHHH
Confidence 9999999999999999998764 899999999986 47888999999985 78888887653
No 239
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-36 Score=335.95 Aligned_cols=216 Identities=22% Similarity=0.384 Sum_probs=173.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-------------------CCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------------------VPP 208 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------------------~~~ 208 (1085)
..+|+|+|++|++|++++|+||||||||||+++|+|+++|. +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999876 99999999876432 124
Q ss_pred ceEEEEccCC--CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHH
Q 001400 209 RTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIM 286 (1085)
Q Consensus 209 ~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l 286 (1085)
+.++||+|++ .+++ .||+||+.|+....+.. . .....++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhcccc-chHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHH
Confidence 6799999986 4454 59999998864321110 0 00112467789
Q ss_pred HHhCCc-ccccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEe
Q 001400 287 KILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLL 365 (1085)
Q Consensus 287 ~~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~ 365 (1085)
+.+||+ ...++ .+.+|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++... +++|++++
T Consensus 161 ~~~gL~~~~~~~-----~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~--g~Tiiivt 233 (320)
T PRK13631 161 NKMGLDDSYLER-----SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKAN--NKTVFVIT 233 (320)
T ss_pred HHcCCChhHhcC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEe
Confidence 999996 34443 34579999999999999999999999999999999999999999999988653 45666688
Q ss_pred cChhHHHhhcCeEEEecCCeEEEecChhhHH---HHHHhCCCCCCC
Q 001400 366 QPAPEAYELFDDVILLSEGQIVYQGPRVSVL---DFFASMGFSCPK 408 (1085)
Q Consensus 366 q~~~~~~~~~D~ii~L~~G~iv~~G~~~~~~---~~f~~~G~~~p~ 408 (1085)
|+.+++..++|+|++|++|++++.|+++++. +.++..|+.+|.
T Consensus 234 Hd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 234 HTMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred cCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 9999999999999999999999999998764 234445555544
No 240
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-36 Score=332.86 Aligned_cols=201 Identities=26% Similarity=0.353 Sum_probs=165.9
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------hcccceEEEEccCC--C
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 912 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gy~~Q~~--~ 912 (1085)
..+|+||||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++ .
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 359999999999999999999999999999999999866 468999999987532 23456799999986 3
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
++ ..|++||+.+...... .......+.++++++.+++.. ..+.. +..||+|||||++|||||+.+|++||
T Consensus 98 ~~-~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lll 168 (280)
T PRK13649 98 LF-EETVLKDVAFGPQNFG---VSQEEAEALAREKLALVGISESLFEKN-----PFELSGGQMRRVAIAGILAMEPKILV 168 (280)
T ss_pred hc-cccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 44 4699999987643221 122333455778899998863 44433 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|++ |++++.|+..
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 230 (280)
T PRK13649 169 LDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-GKLVLSGKPK 230 (280)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999999777999999999986 46678999999985 7888888754
No 241
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-36 Score=332.18 Aligned_cols=205 Identities=25% Similarity=0.338 Sum_probs=169.1
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-----hcccceEEEEccCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~~ 913 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++..
T Consensus 11 ~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 88 (271)
T PRK13638 11 YQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQ 88 (271)
T ss_pred cCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcccccCCHHHHHhheEEEeeChhh
Confidence 344569999999999999999999999999999999999876 568999999987531 2345679999998753
Q ss_pred -CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 914 -SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 914 -~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
....|+.||+.+....+ ........+.++++++.+++.+..+.. +..||||||||++|||||+.+|+||||
T Consensus 89 ~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrl~laraL~~~p~lllL 160 (271)
T PRK13638 89 QIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLSHGQKKRVAIAGALVLQARYLLL 160 (271)
T ss_pred ccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 34568999998754322 112233345578899999987766553 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||+|||+.++..+.+.|+++.++|.|||++||+++ .+.+.+|++++|++ |++++.|+..
T Consensus 161 DEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 221 (271)
T PRK13638 161 DEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILTHGAPG 221 (271)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999998777999999999986 46678999999985 7888888753
No 242
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=5.2e-36 Score=323.21 Aligned_cols=202 Identities=26% Similarity=0.400 Sum_probs=168.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 36999999999999999999999999999999999998876 9999999988754332 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHh-CCcccccccccCc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-GLDTCADTLVGDE 302 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 302 (1085)
+||+||+.+.....+ . . +....++.+++.+ ++++..++.+
T Consensus 90 ~t~~~~l~~~~~~~~--~--~--------------------------------~~~~~~~~~l~~~~~l~~~~~~~~--- 130 (222)
T cd03224 90 LTVEENLLLGAYARR--R--A--------------------------------KRKARLERVYELFPRLKERRKQLA--- 130 (222)
T ss_pred CcHHHHHHHHhhhcC--c--h--------------------------------hHHHHHHHHHHHHHhhhhhhhCch---
Confidence 999999988643221 0 0 0011245566666 4666555544
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|++++. . +++|+.++|+.+++.+++|++++|+
T Consensus 131 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 131 --GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEee
Confidence 46999999999999999999999999999999999999999999999875 3 4566668888999999999999999
Q ss_pred CCeEEEecChhhH
Q 001400 383 EGQIVYQGPRVSV 395 (1085)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1085)
+|++++.|+.+++
T Consensus 207 ~G~i~~~~~~~~~ 219 (222)
T cd03224 207 RGRVVLEGTAAEL 219 (222)
T ss_pred CCeEEEeCCHHHH
Confidence 9999999987765
No 243
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=319.48 Aligned_cols=203 Identities=24% Similarity=0.312 Sum_probs=182.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------hcccceEEEEccCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gy~~Q~~~~~ 914 (1085)
..-++|+||+|+.||++.|||-||||||||+++|.++.. +..|+|.++|.++.. .-+++.+++|||+..++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 446789999999999999999999999999999999877 679999999987532 22456799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
|..||.||+.|+..++ .++.+++++.+.++++.+||.+..+.+. ++||||+||||.|||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999997765 4667888899999999999999988764 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|+|+|||--+..+++.|.++.++ ++|||+||||++ +.++.-|||.+|+ +|+++..|...+
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~e 251 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPEE 251 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHHH
Confidence 99999999999999999998754 899999999997 6889999999998 589999998754
No 244
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=327.76 Aligned_cols=211 Identities=22% Similarity=0.277 Sum_probs=169.7
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCC-----hhcccceEEEEccC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-----QETFARISGYCEQN 910 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~-----~~~~~~~~gy~~Q~ 910 (1085)
+++..+|+|+||+|++||++||+|+||||||||+++|+|..++. +.+|+|.++|.++. ...+++.+||++|+
T Consensus 14 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~ 93 (258)
T PRK14241 14 YGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQR 93 (258)
T ss_pred ECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccc
Confidence 34457999999999999999999999999999999999976421 25899999998753 12345679999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 911 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
+.+++.+|++||+.+....+. .......++.++++++.+++.+. .+... ..+.+||+|||||++|||||+.+|++
T Consensus 94 ~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--~~~~~LS~G~~qrv~laral~~~p~l 169 (258)
T PRK14241 94 PNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLD--KPGGGLSGGQQQRLCIARAIAVEPDV 169 (258)
T ss_pred cccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhh--CCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 988999999999987653321 11223344567888988887421 11111 12357999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEec-----CcEEEEecCCC
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR-----GGELIYAGPLG 1055 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~-----gG~~~~~g~~~ 1055 (1085)
|||||||+|||+.++..+.+.|++++ +++|||++||+++ ++.+.+|++++|++ .|++++.|+..
T Consensus 170 lllDEPt~~LD~~~~~~l~~~l~~~~-~~~tviivsH~~~-~~~~~~d~i~~l~~~~~~~~g~i~~~~~~~ 238 (258)
T PRK14241 170 LLMDEPCSALDPISTLAIEDLINELK-QDYTIVIVTHNMQ-QAARVSDQTAFFNLEATGKPGRLVEIDDTE 238 (258)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhCCEEEEEecccCCCCceEEecCCHH
Confidence 99999999999999999999999985 4789999999986 47788999999973 57999988753
No 245
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=6.4e-36 Score=341.54 Aligned_cols=208 Identities=22% Similarity=0.279 Sum_probs=175.5
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCc----cCCCCCC-------CceEEEE
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGH----GFKEFVP-------PRTSAYV 214 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~----~~~~~~~-------~~~~~yv 214 (1085)
....+|+|+|+.|++||+++|+||||||||||+++|+|.++|. +|+|+++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 3467999999999999999999999999999999999999876 999999996 3322211 2479999
Q ss_pred ccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccc
Q 001400 215 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 294 (1085)
Q Consensus 215 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 294 (1085)
+|++.+++.+||+||+.|+....+... .+.+..++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999998754332110 0012247788999999887
Q ss_pred ccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhh
Q 001400 295 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 374 (1085)
Q Consensus 295 ~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~ 374 (1085)
.|..+ ..|||||||||+|||||+.+|+||+|||||+|||+.++.++.+.|+++.+..+ ++|+.++|+.+++.++
T Consensus 158 ~~~~~-----~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~-~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKP-----GELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLN-KTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHh
Confidence 77655 46999999999999999999999999999999999999999999999876444 5566688999999999
Q ss_pred cCeEEEecCCeEEEecChhhHH
Q 001400 375 FDDVILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 375 ~D~ii~L~~G~iv~~G~~~~~~ 396 (1085)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999988774
No 246
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=7.1e-36 Score=328.90 Aligned_cols=209 Identities=27% Similarity=0.378 Sum_probs=171.8
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSP 915 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~ 915 (1085)
+++..+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 11 ~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (256)
T TIGR03873 11 AGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAV 88 (256)
T ss_pred ECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcccCCHHHHhhheEEecccCccCC
Confidence 345679999999999999999999999999999999999866 468999999987542 234557999999987778
Q ss_pred CCCHHHHHHHhhh-hcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 916 GLTVLESLLFSAW-LRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 916 ~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
..||+||+.+... .+...........+.+.++++.+++.+..+... ..||+|||||++|||||+.+|++++|||
T Consensus 89 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDE 163 (256)
T TIGR03873 89 PLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGGERQRVHVARALAQEPKLLLLDE 163 (256)
T ss_pred CCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 8999999987521 100000111223346788999999876665543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
||+|||+.++..+++.|+++.++|.|||++||+++ .+.+.+|++++|++ |+++..|+..+
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~~ 223 (256)
T TIGR03873 164 PTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAGPPRE 223 (256)
T ss_pred ccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEecCHHH
Confidence 99999999999999999999777899999999987 47788999999985 68888887653
No 247
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.6e-36 Score=289.82 Aligned_cols=200 Identities=30% Similarity=0.397 Sum_probs=170.8
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------hcccceEEEEccC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQN 910 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gy~~Q~ 910 (1085)
..+...+|++|++.|++||.+||+|||||||||||-+|+|... +.+|+|.+.|++... .-+.+.+|+|+|.
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQS 96 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQS 96 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEe
Confidence 3466789999999999999999999999999999999999877 568999999998642 1245679999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 911 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
..+.|++|..||+.....++... .........+.++.+||.+..+.+. .+|||||+|||+||||++..|+||
T Consensus 97 F~Lip~ltAlENV~lPleL~ge~---~~~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vL 168 (228)
T COG4181 97 FHLIPNLTALENVALPLELRGES---SADSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVL 168 (228)
T ss_pred eeccccchhhhhccchhhhcCCc---cccHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEE
Confidence 99999999999999887776421 1223344678899999987665543 589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 1050 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~ 1050 (1085)
|.||||-+||.++...|.+++-.+.. .|.|.|++||||. +...|||.+-|.+ |+++.
T Consensus 169 fADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 169 FADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred eccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 99999999999999999999998864 5999999999985 6778999999986 67764
No 248
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-36 Score=326.52 Aligned_cols=213 Identities=27% Similarity=0.395 Sum_probs=172.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1085)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999998776 999999998876432 135799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||+||+.++..... .... . ..+... ......++.+++.+||.+..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~~~---~------~~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--STWR---S------LFGLFP---------------KEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc--hhhh---h------hcccCc---------------HHHHHHHHHHHHHcCChhhhCCCc--
Confidence 99999999987532110 0000 0 000000 001234677899999987666544
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..++|++++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREE-GITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 5699999999999999999999999999999999999999999999987543 445666888899999999999999
Q ss_pred cCCeEEEecChhhH
Q 001400 382 SEGQIVYQGPRVSV 395 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1085)
++|++++.|+++++
T Consensus 219 ~~G~i~~~~~~~~~ 232 (241)
T cd03256 219 KDGRIVFDGPPAEL 232 (241)
T ss_pred ECCEEEeecCHHHh
Confidence 99999999998775
No 249
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=320.14 Aligned_cols=215 Identities=22% Similarity=0.310 Sum_probs=179.4
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhC-C-CCceeeEEEECCccCCCCC-------CCceEEEEccC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG-H-HLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQ 217 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~-~-~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~ 217 (1085)
...+++||||.+++||+++|+|.|||||||+.++|+|+++ + ....+|+|.++|.++-.+. ..+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 3457899999999765443 23589999999
Q ss_pred C--CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccc
Q 001400 218 D--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 295 (1085)
Q Consensus 218 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 295 (1085)
+ .+.|.+||.+.+.-..+.+.... . ..+...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------~------------------------~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------S------------------------KKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------h------------------------hHHHHHHHHHHHHHcCCCCHH
Confidence 6 57888999998866544321100 0 011233577889999998743
Q ss_pred cccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhc
Q 001400 296 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 375 (1085)
Q Consensus 296 dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~ 375 (1085)
. +-+.+..+|||||||||.||.||+.+|++|+.||||++||..++.+|++.|+++.++ .+++++.++|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e-~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQRE-KGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhc
Confidence 2 235677899999999999999999999999999999999999999999999999885 4677888999999999999
Q ss_pred CeEEEecCCeEEEecChhhHH
Q 001400 376 DDVILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 376 D~ii~L~~G~iv~~G~~~~~~ 396 (1085)
|||+||+.|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999998874
No 250
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.4e-35 Score=321.17 Aligned_cols=196 Identities=27% Similarity=0.381 Sum_probs=163.7
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh---c---c-cceEEEEccCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T---F-ARISGYCEQNDIHS 914 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~---~-~~~~gy~~Q~~~~~ 914 (1085)
..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.... . . ++.++|++|++.++
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 369999999999999999999999999999999999866 4689999999875421 1 1 35799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+.+|+.||+.+....+. .......+.+.++++.+++.+..+..+ ..||+|||||++|||||+.+|++|||||
T Consensus 101 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrl~la~al~~~p~llllDE 172 (228)
T PRK10584 101 PTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQLSGGEQQRVALARAFNGRPDVLFADE 172 (228)
T ss_pred CCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 89999999987643321 122334456788999999876655443 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 1050 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~ 1050 (1085)
||+|||+.++..+.+.|++++++ |.|||++||+++ .+ +.+|++++|++ |++++
T Consensus 173 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~i~~ 226 (228)
T PRK10584 173 PTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQLQE 226 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEe
Confidence 99999999999999999998754 899999999986 34 56999999985 67754
No 251
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=325.72 Aligned_cols=210 Identities=23% Similarity=0.288 Sum_probs=166.9
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCC---CCCeeeeEEEEcCccCCh-----hcccceEEEEccC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQN 910 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~---~~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~ 910 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|.. ++.+.+|+|.++|.++.. ..+++.++|++|+
T Consensus 13 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~ 92 (250)
T PRK14245 13 YGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQR 92 (250)
T ss_pred ECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecC
Confidence 34567999999999999999999999999999999999952 211247999999987642 2345679999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 911 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
+.+++ .|++||+.+....+.. .......+.++++++.+++.+........ .+..||+|||||++|||||+.+|++|
T Consensus 93 ~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~G~~qrv~laral~~~p~ll 168 (250)
T PRK14245 93 PNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKE-SAFALSGGQQQRLCIARAMAVSPSVL 168 (250)
T ss_pred CccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhC-CcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 88876 5999999876433211 11122345578889988885421111111 23579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 169 lLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~~~~~~~~~ 230 (250)
T PRK14245 169 LMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GEMVEYDDTK 230 (250)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999999999985 5899999999986 47788999999985 7899998754
No 252
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-36 Score=313.70 Aligned_cols=173 Identities=61% Similarity=0.993 Sum_probs=151.0
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e 921 (1085)
..+|+|+||++++||+++|+|+||||||||+++|+|.....+.+|+|.++|.++. ..+++.++|++|++.+++.+|++|
T Consensus 20 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~-~~~~~~i~~~~q~~~~~~~~tv~~ 98 (192)
T cd03232 20 RQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD-KNFQRSTGYVEQQDVHSPNLTVRE 98 (192)
T ss_pred eEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH-HHhhhceEEecccCccccCCcHHH
Confidence 5699999999999999999999999999999999996432246899999998764 345667999999998889999999
Q ss_pred HHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCH
Q 001400 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1085)
Q Consensus 922 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~ 1001 (1085)
|+.+.... + .||+|||||++|||||+.+|++|+|||||+|||+
T Consensus 99 ~l~~~~~~-------------------~------------------~LSgGe~qrv~la~al~~~p~vlllDEP~~~LD~ 141 (192)
T cd03232 99 ALRFSALL-------------------R------------------GLSVEQRKRLTIGVELAAKPSILFLDEPTSGLDS 141 (192)
T ss_pred HHHHHHHH-------------------h------------------cCCHHHhHHHHHHHHHhcCCcEEEEeCCCcCCCH
Confidence 99864210 0 4999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 1002 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 1002 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
.++..+++.|+++++.|+|||++||+++.++.+.+|++++|+++|++++.|
T Consensus 142 ~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 142 QAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999877799999999998633567899999998657888765
No 253
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=8.4e-36 Score=317.72 Aligned_cols=192 Identities=23% Similarity=0.357 Sum_probs=161.8
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCC---h----hcccceEEEEccCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---Q----ETFARISGYCEQND 911 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gy~~Q~~ 911 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++. . ...++.++|++|++
T Consensus 8 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~ 85 (206)
T TIGR03608 8 FGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNF 85 (206)
T ss_pred ECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecch
Confidence 345679999999999999999999999999999999999876 56899999998742 1 12456799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++..|++||+.+....+ ........+.++++++.+++.+..+... .+||+|||||++|||||+.+|++||
T Consensus 86 ~~~~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~lll 157 (206)
T TIGR03608 86 ALIENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLIL 157 (206)
T ss_pred hhccCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9888899999998864322 1222334456788999999977666543 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEE
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l 1042 (1085)
|||||+|||+.++..+.+.|+++.++|.|||++||+++ ..+.+|++++|
T Consensus 158 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 158 ADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred EeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999999998777999999999985 34679999875
No 254
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-36 Score=330.82 Aligned_cols=203 Identities=28% Similarity=0.306 Sum_probs=170.1
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCC-CCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1085)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5999999999999999999999999999999999999876 999999999875432 1357999999963 45678
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||+||+.|+....+... ......++++++.+||.+..++.+
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 136 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPP----- 136 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCh-----
Confidence 99999988643221100 001224778899999987777655
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+.+++.+++|+|++|++|
T Consensus 137 ~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 137 YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ--GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 469999999999999999999999999999999999999999999998753 455666889999999999999999999
Q ss_pred eEEEecChhhH
Q 001400 385 QIVYQGPRVSV 395 (1085)
Q Consensus 385 ~iv~~G~~~~~ 395 (1085)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 255
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=327.45 Aligned_cols=205 Identities=22% Similarity=0.270 Sum_probs=166.1
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.+||++|++
T Consensus 18 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 97 (254)
T PRK14273 18 TDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTP 97 (254)
T ss_pred CCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecc
Confidence 3456999999999999999999999999999999999976531 247999999987531 23466799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc----ccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
.+++ .||+||+.+....... .......+.++++++.+++.+ ..+. .+.+||||||||++|||||+.+|
T Consensus 98 ~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LSgG~~qrv~laral~~~p 169 (254)
T PRK14273 98 NPFL-MSIYDNISYGPKIHGT--KDKKKLDEIVEQSLKKSALWNEVKDKLNT-----NALSLSGGQQQRLCIARTLAIEP 169 (254)
T ss_pred cccc-CcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhCCchhhHHHHhC-----CcccCCHHHHHHHHHHHHHHcCC
Confidence 8774 8999999886433211 112233456778888888732 2222 23579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
++|||||||+|||+.++..+++.|+++. ++.|||++||+++ .+.+.+|++++|++ |+++..|+..
T Consensus 170 ~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 234 (254)
T PRK14273 170 NVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFLN-GCIEEESSTD 234 (254)
T ss_pred CEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999999999985 4799999999986 46788999999985 7898888753
No 256
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-35 Score=315.27 Aligned_cols=183 Identities=46% Similarity=0.768 Sum_probs=156.4
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC--CCCceEEEEccCCCCCCC
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~ 223 (1085)
.++.+|+|+|+.|++|++++|+|||||||||||++|+|.+++..+.+|+|.++|+++... ..++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 345799999999999999999999999999999999999873223599999999987543 234679999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.++.+.. . +..
T Consensus 98 ~tv~~~l~~~~~~~---------------------------------------------------------~-----~~~ 115 (202)
T cd03233 98 LTVRETLDFALRCK---------------------------------------------------------G-----NEF 115 (202)
T ss_pred CcHHHHHhhhhhhc---------------------------------------------------------c-----ccc
Confidence 99999998753210 1 123
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
+..||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++.+..+.++++++||+.+++.+++|++++|++
T Consensus 116 ~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 116 VRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred hhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 34699999999999999999999999999999999999999999999987644556777778888899999999999999
Q ss_pred CeEEEec
Q 001400 384 GQIVYQG 390 (1085)
Q Consensus 384 G~iv~~G 390 (1085)
|++++.|
T Consensus 196 G~i~~~g 202 (202)
T cd03233 196 GRQIYYG 202 (202)
T ss_pred CEEEecC
Confidence 9998765
No 257
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=335.65 Aligned_cols=208 Identities=17% Similarity=0.243 Sum_probs=168.9
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC--CeeeeEEEEcCccCCh---hc----ccceEEEEccCC-
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQ---ET----FARISGYCEQND- 911 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~--~~~~G~i~i~g~~~~~---~~----~~~~~gy~~Q~~- 911 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|...+ .+.+|+|.++|.++.. .. +++.++|++|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 5799999999999999999999999999999999997542 2468999999987642 11 224699999998
Q ss_pred -CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 912 -IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 912 -~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
.+.|.+|+.+++........ .....+..+.+.++++.++|.+..+..... +.+||||||||++|||||+.+|+||
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~--p~~LSgGq~QRv~iArAL~~~P~ll 175 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY--PHQLSGGMSQRVMIAMAIACRPKLL 175 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--chhCCHHHHHHHHHHHHHHhCCCEE
Confidence 46788999988865433221 123344556788999999997532211112 3589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+||||+|||+.++..+++.|+++.+ .|.|||+||||++ .+.+.+|++++|.+ |++++.|+..
T Consensus 176 ilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~~-G~ive~g~~~ 239 (326)
T PRK11022 176 IADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMYA-GQVVETGKAH 239 (326)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 99999999999999999999999976 5999999999986 36678999999985 7999998754
No 258
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=325.01 Aligned_cols=213 Identities=22% Similarity=0.304 Sum_probs=169.2
Q ss_pred cccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC-CeeeeEEEEcCccCCh---hcccceEEEEccCCC
Q 001400 837 VLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-GIIEGDIYISGYPKRQ---ETFARISGYCEQNDI 912 (1085)
Q Consensus 837 ~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~-~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~ 912 (1085)
+.+++..+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 10 ~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~ 89 (246)
T PRK14269 10 LFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPN 89 (246)
T ss_pred EEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCc
Confidence 334456799999999999999999999999999999999997531 2468999999987643 234667999999988
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+++ .|++||+.+....+.... ......+.++++++.+++.+....... ..+..||+|||||++|||||+.+|++|+|
T Consensus 90 l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lllL 166 (246)
T PRK14269 90 VFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGGQQQRLCIARALAIKPKLLLL 166 (246)
T ss_pred ccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 886 699999987643321100 112334457788999998532111111 12357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 167 DEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 226 (246)
T PRK14269 167 DEPTSALDPISSGVIEELLKELS-HNLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFGESK 226 (246)
T ss_pred cCCcccCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEECCHH
Confidence 99999999999999999999986 4899999999986 47788999999985 7899888753
No 259
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-36 Score=318.42 Aligned_cols=222 Identities=23% Similarity=0.328 Sum_probs=193.6
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-------CceEEEEccCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1085)
...-++|+|+.|+.||+..|||=||||||||+++|.++..|+ +|+|.++|.++..... ++.+++|+|+-.
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 356789999999999999999999999999999999999886 9999999998765532 468999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1085)
++|+.||.||..|+...+|.+.. +.+.+..+.|+..||+...+.++
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcCc
Confidence 99999999999999998876421 11234778899999999888655
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
.+||||+||||.|||||+.+|+||+||||+|+|||--+.++.+.|.++...+++| |+.++|+.+|++.+.|||.
T Consensus 163 -----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KT-IvFitHDLdEAlriG~rIa 236 (386)
T COG4175 163 -----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKT-IVFITHDLDEALRIGDRIA 236 (386)
T ss_pred -----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCe-EEEEecCHHHHHhccceEE
Confidence 5699999999999999999999999999999999999999999999998877665 5558999999999999999
Q ss_pred EecCCeEEEecChhhHHHHHHhCCCCCCCCCChhHHHHhh
Q 001400 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEV 419 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v 419 (1085)
+|.+|+|+..|++++++. .|...-+++|...+
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 35555566676654
No 260
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=331.69 Aligned_cols=205 Identities=20% Similarity=0.280 Sum_probs=169.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-------CCceEEEEccCC--
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQD-- 218 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~d-- 218 (1085)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999876 999999999875421 245799999986
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-ccccc
Q 001400 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADT 297 (1085)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 297 (1085)
.+++ .||.||+.|+....+... .+...+++++++.+||. ...++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhC
Confidence 3444 599999988643211100 00122477889999996 55555
Q ss_pred cccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCe
Q 001400 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1085)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1085)
. ++.|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++.+. .+++|+.++|+.+++.+++|+
T Consensus 142 ~-----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dr 215 (286)
T PRK13646 142 S-----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADE 215 (286)
T ss_pred C-----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCE
Confidence 4 4579999999999999999999999999999999999999999999998754 346666788999999999999
Q ss_pred EEEecCCeEEEecChhhHH
Q 001400 378 VILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 378 ii~L~~G~iv~~G~~~~~~ 396 (1085)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 261
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-35 Score=323.94 Aligned_cols=210 Identities=21% Similarity=0.295 Sum_probs=168.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC--CC-eeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--GG-IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||++||+|+||||||||+++|+|..+ +. +.+|+|.++|.++.. ..+++.++|++|++
T Consensus 15 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 94 (252)
T PRK14256 15 GKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKP 94 (252)
T ss_pred CCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCC
Confidence 44579999999999999999999999999999999999753 21 257999999987632 23567799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++..|++||+.+...... ........+.++++++.+++......... ..+..||+|||||++|||||+.+|++|+
T Consensus 95 ~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrl~laral~~~p~lll 171 (252)
T PRK14256 95 NPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAMELSGGQQQRLCIARTIAVKPEVIL 171 (252)
T ss_pred CCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 98988999999987543221 11122233457788888887532111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.||++++|. +|+++..|+..
T Consensus 172 lDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~~ 232 (252)
T PRK14256 172 MDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY-MGDLVECGETK 232 (252)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE-CCEEEEeCCHH
Confidence 9999999999999999999999865 689999999986 4678899999997 47899888754
No 262
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-36 Score=325.25 Aligned_cols=206 Identities=28% Similarity=0.390 Sum_probs=171.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1085)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 45999999999999999999999999999999999998876 999999998775432 245789999999989999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcc--cccccccCc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT--CADTLVGDE 302 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 302 (1085)
||+||+.+.....+... ......+.++++.+||+. ..++.
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~~---- 132 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADRY---- 132 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhcC----
Confidence 99999987643221100 001223677899999975 44443
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|+
T Consensus 133 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 133 -PHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQEL-GKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999987533 4556667888889999999999999
Q ss_pred CCeEEEecChhhHH
Q 001400 383 EGQIVYQGPRVSVL 396 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1085)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999887653
No 263
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=7e-36 Score=318.73 Aligned_cols=195 Identities=26% Similarity=0.415 Sum_probs=165.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-CCCceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-VPPRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 226 (1085)
.++|+|+|+.+++|++++|+|||||||||||++|+|.+++. +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999998776 99999999876432 124579999999988989999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.+.....+. .+..++++++.+||++..++.+ ..
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKV-----KG 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhH-----hh
Confidence 9999875432110 0123677889999987776654 46
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ . +.+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-Q-GITVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998875 3 34566678888999999999999999999
Q ss_pred EEec
Q 001400 387 VYQG 390 (1085)
Q Consensus 387 v~~G 390 (1085)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 264
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9.4e-36 Score=337.15 Aligned_cols=209 Identities=20% Similarity=0.248 Sum_probs=174.4
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCC--
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD-- 218 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d-- 218 (1085)
...+|+|||++|++||+++|+|+||||||||+++|+|++++. +|+|.++|.++.+.. .++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 357999999999999999999999999999999999999875 999999999876543 245799999997
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-ccccc
Q 001400 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADT 297 (1085)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 297 (1085)
.+++.+||.||+.+..+....... . .+....++++++.+||. ...++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~~~--------~------------------------~~~~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPKLS--------R------------------------QEVKDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCC--------H------------------------HHHHHHHHHHHHHcCCChHHhcC
Confidence 578899999999886442210000 0 00122467889999994 34454
Q ss_pred cccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCe
Q 001400 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1085)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1085)
.+..|||||||||+||+||+.+|++|++||||+|||..++.+|.+.|+++.+.. +++++.++|+...+.+++|+
T Consensus 158 -----~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-~~til~iTHdl~~~~~~~dr 231 (331)
T PRK15079 158 -----YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREM-GLSLIFIAHDLAVVKHISDR 231 (331)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCE
Confidence 445799999999999999999999999999999999999999999999987643 45677789999999999999
Q ss_pred EEEecCCeEEEecChhhHH
Q 001400 378 VILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 378 ii~L~~G~iv~~G~~~~~~ 396 (1085)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999988774
No 265
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=334.28 Aligned_cols=213 Identities=19% Similarity=0.238 Sum_probs=172.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCC-ceeeEEEECCccCCCCCC-------CceEEEEccCC-
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-QVSGKITYNGHGFKEFVP-------PRTSAYVSQQD- 218 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d- 218 (1085)
..+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999986421 358999999998765431 24699999997
Q ss_pred -CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccc
Q 001400 219 -WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1085)
Q Consensus 219 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1085)
.+.|.+||.+++........... . .+...+++++|+.+||++..+.
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------~------------------------~~~~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------K------------------------KTRRQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------H------------------------HHHHHHHHHHHHHCCCCChHHH
Confidence 47889999999876543211000 0 0012347888999999752211
Q ss_pred cccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCe
Q 001400 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1085)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1085)
-+.....|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+.. +.+++.++|+...+.+++|+
T Consensus 147 --l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~-g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 147 --LDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKE-NMALVLITHDLALVAEAAHK 223 (326)
T ss_pred --HhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCE
Confidence 123456799999999999999999999999999999999999999999999987644 45667788999999999999
Q ss_pred EEEecCCeEEEecChhhHH
Q 001400 378 VILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 378 ii~L~~G~iv~~G~~~~~~ 396 (1085)
|++|++|++++.|+.+++.
T Consensus 224 i~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998875
No 266
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.4e-36 Score=318.75 Aligned_cols=192 Identities=30% Similarity=0.353 Sum_probs=161.4
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCC-CCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDW-QVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 226 (1085)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999998876 9999999988754333467999999974 3456899
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.+.....+ .....++++++.+||.+..++.+ ..
T Consensus 90 ~e~l~~~~~~~~--------------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (205)
T cd03226 90 REELLLGLKELD--------------------------------------AGNEQAETVLKDLDLYALKERHP-----LS 126 (205)
T ss_pred HHHHhhhhhhcC--------------------------------------ccHHHHHHHHHHcCCchhcCCCc-----hh
Confidence 999987532110 00123677899999988777655 46
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++. +.+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQ--GKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998653 44566678888999999999999999997
Q ss_pred E
Q 001400 387 V 387 (1085)
Q Consensus 387 v 387 (1085)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 267
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.3e-36 Score=368.35 Aligned_cols=207 Identities=26% Similarity=0.395 Sum_probs=166.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1085)
.++|+|+|++|+||+.++|+||||||||||+++|+|.+ |. +|+|.+||.++.+... ++.++||+|++++|. .
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-G 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-c
Confidence 35999999999999999999999999999999999998 65 8999999999877653 578999999999776 5
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
|++|||.++.. ....+.+.++++. + ..++.+ -.|++..||.||+. .
T Consensus 438 TI~eNI~~g~~----~~~~eei~~al~~------------------a---------~l~~~i--~~lp~G~dT~vge~-G 483 (588)
T PRK11174 438 TLRDNVLLGNP----DASDEQLQQALEN------------------A---------WVSEFL--PLLPQGLDTPIGDQ-A 483 (588)
T ss_pred CHHHHhhcCCC----CCCHHHHHHHHHH------------------h---------CHHHHH--HhcccccccccccC-C
Confidence 99999988521 0111111111110 0 012222 24677889999986 4
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
.+||||||||++||||++++|+||+||||||+||+.++..|.+.|+++.+ ++|+|+ ++|.. +....||+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvIi-ItHrl-~~i~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTLM-VTHQL-EDLAQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEEE-EecCh-HHHHhCCEEEEEeCC
Confidence 57999999999999999999999999999999999999999999998753 456555 55554 456779999999999
Q ss_pred eEEEecChhhHHH
Q 001400 385 QIVYQGPRVSVLD 397 (1085)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1085)
+++..|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999998864
No 268
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1e-35 Score=321.99 Aligned_cols=198 Identities=26% Similarity=0.354 Sum_probs=164.7
Q ss_pred eeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHH
Q 001400 845 LVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLL 924 (1085)
Q Consensus 845 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e~l~ 924 (1085)
|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.... ...+|++|++.+++.+|+.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 469999999999999999999999999999999876 56899999998764322 12489999999999999999998
Q ss_pred HhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHH
Q 001400 925 FSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAA 1004 (1085)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~ 1004 (1085)
+......+ ........+.+.++++.+++.+..+... ..||||||||++|||||+.+|++|||||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 1222334456788999999976655543 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 1005 AIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 1005 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 47788999999985 688888764
No 269
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=335.14 Aligned_cols=203 Identities=26% Similarity=0.295 Sum_probs=170.3
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCC--CC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IH 913 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~--~~ 913 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++ .+
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l 105 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSL 105 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhc
Confidence 579999999999999999999999999999999999876 468999999987642 23466799999998 57
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
.|.+|+.+++.+..... ......+..+.+.++++.+++.+ ..+.. +.+||||||||++|||||+.+|+|||+
T Consensus 106 ~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p~~LSgGq~QRv~iArAL~~~P~lLil 178 (327)
T PRK11308 106 NPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----PHMFSGGQRQRIAIARALMLDPDVVVA 178 (327)
T ss_pred CCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----CccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 78899999987653322 11233445567889999999953 33433 358999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||++||..++..|+++|+++.++ |.|||+||||++ .+.+.+|++++|.+ |++++.|+..
T Consensus 179 DEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~-G~ive~g~~~ 240 (327)
T PRK11308 179 DEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL-GRCVEKGTKE 240 (327)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999999999764 999999999986 36678999999985 7999999754
No 270
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=329.79 Aligned_cols=216 Identities=25% Similarity=0.357 Sum_probs=175.4
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCC-CCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1085)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35999999999999999999999999999999999999876 999999999876432 2457999999973 5777
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||.|||.++....+... .+...+++++++.+||++..++.+
T Consensus 97 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~---- 138 (279)
T PRK13635 97 ATVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREP---- 138 (279)
T ss_pred ccHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc----
Confidence 899999988643221100 001224788899999988777655
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~-~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 139 -HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQK-GITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999987643 455666778878876 5999999999
Q ss_pred CeEEEecChhhHHH---HHHhCCCCCC
Q 001400 384 GQIVYQGPRVSVLD---FFASMGFSCP 407 (1085)
Q Consensus 384 G~iv~~G~~~~~~~---~f~~~G~~~p 407 (1085)
|++++.|+.+++.. .+...|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999887653 3334454443
No 271
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=7.6e-36 Score=326.46 Aligned_cols=213 Identities=24% Similarity=0.334 Sum_probs=171.4
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1085)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999998776 999999998875432 245799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||+||+.++..... .... .. .+..+ .....+++++++.+||.+..+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~~---~~------~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 143 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTWR---SL------LGRFS---------------EEDKERALSALERVGLADKAYQRA-- 143 (243)
T ss_pred ccccHHHHHhhcccccc--cchh---hh------hcccc---------------HHHHHHHHHHHHHcCcHhhhcCCc--
Confidence 99999999987532100 0000 00 00000 001234778899999987666544
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.++||++++|
T Consensus 144 ---~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 144 ---DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKED-GITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEE
Confidence 5699999999999999999999999999999999999999999999986543 455666888889999999999999
Q ss_pred cCCeEEEecChhhH
Q 001400 382 SEGQIVYQGPRVSV 395 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1085)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999988764
No 272
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=328.24 Aligned_cols=212 Identities=25% Similarity=0.388 Sum_probs=170.8
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC------eeeeEEEEcCccCCh---hcccceEEEEc
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------IIEGDIYISGYPKRQ---ETFARISGYCE 908 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~------~~~G~i~i~g~~~~~---~~~~~~~gy~~ 908 (1085)
.+++..+|+|+||+|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.+... ..+++.++|++
T Consensus 10 ~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~ 89 (272)
T PRK13547 10 ARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLP 89 (272)
T ss_pred EECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEec
Confidence 345567999999999999999999999999999999999976521 127999999987542 33456689999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcC-CCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHh---
Q 001400 909 QNDIHSPGLTVLESLLFSAWLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV--- 984 (1085)
Q Consensus 909 Q~~~~~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~--- 984 (1085)
|++..++.+|++||+.+...... ..........+.++++++.+++.+..+.. +..||+|||||++|||||+
T Consensus 90 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~~ 164 (272)
T PRK13547 90 QAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----VTTLSGGELARVQFARVLAQLW 164 (272)
T ss_pred ccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhccc
Confidence 99876667899999987532111 00111123345678899999997765543 3579999999999999999
Q ss_pred ------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 985 ------ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 985 ------~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.||++++|++ |++++.|+..+
T Consensus 165 ~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~~ 241 (272)
T PRK13547 165 PPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLAD-GAIVAHGAPAD 241 (272)
T ss_pred cccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEEecCHHH
Confidence 599999999999999999999999999998765 899999999986 46678999999985 78998887643
No 273
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.5e-35 Score=327.74 Aligned_cols=204 Identities=24% Similarity=0.340 Sum_probs=168.7
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh------cccceEEEEccCC--C
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQND--I 912 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gy~~Q~~--~ 912 (1085)
++.+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++... .+++.++|++|++ .
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 3579999999999999999999999999999999999876 5689999999876421 2356799999997 4
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
+.+..|++||+.+...... ........+.++++++.+++. ...+.. +..||+|||||++|||||+.+|++||
T Consensus 101 ~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LSgGe~qrv~laral~~~p~ill 173 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PRQLSGGQLQRINIARALAVKPKLIV 173 (265)
T ss_pred cCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 5678999999976532111 112223345678899999985 455543 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++.++ |.|||++||+++ .+.+.+|++++|++ |++++.|+..
T Consensus 174 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 236 (265)
T TIGR02769 174 LDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-GQIVEECDVA 236 (265)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-CEEEEECCHH
Confidence 99999999999999999999998764 899999999986 46678999999984 7899988764
No 274
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=325.06 Aligned_cols=209 Identities=26% Similarity=0.345 Sum_probs=165.9
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC---CCeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~---~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|... +.+.+|+|.++|.++.. ..+++.++|++|++
T Consensus 17 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 96 (253)
T PRK14242 17 GDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKP 96 (253)
T ss_pred CCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCC
Confidence 34569999999999999999999999999999999999642 11358999999987632 23456799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++ .|++||+.+....+.. .......+.++++++.+++.+....... ..+..||||||||++|||||+.+|+|||
T Consensus 97 ~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgGq~qrv~laral~~~p~lll 172 (253)
T PRK14242 97 NPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ESALGLSGGQQQRLCIARALAVEPEVLL 172 (253)
T ss_pred CCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8887 5999999886433211 1122334557788888888542111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 173 lDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~~ 233 (253)
T PRK14242 173 MDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-GKLIEVGPTE 233 (253)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999999999985 4799999999986 46788999999985 6888887653
No 275
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=322.82 Aligned_cols=209 Identities=23% Similarity=0.267 Sum_probs=170.6
Q ss_pred eeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHHHHH
Q 001400 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLESLLF 925 (1085)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gy~~Q~~~~~~~~tv~e~l~~ 925 (1085)
||||++++|+++||+|+||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 8999999999999999999999999999999866 5689999999875432 224579999999999999999999986
Q ss_pred hhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHH
Q 001400 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1085)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~ 1005 (1085)
...... . ......+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|||||||+|||+.++.
T Consensus 95 ~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~ 166 (232)
T PRK10771 95 GLNPGL--K-LNAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQ 166 (232)
T ss_pred cccccc--C-CCHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 532110 1 11233456788999999977666543 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC--chHHHHHHHHh
Q 001400 1006 IVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS--KSCELIKYFEV 1067 (1085)
Q Consensus 1006 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~--~~~~~~~~~~~ 1067 (1085)
.+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+..+ ....+.++|..
T Consensus 167 ~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~~~~~~~~~~~~~~~~ 229 (232)
T PRK10771 167 EMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPTDELLSGKASASALLG 229 (232)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCHHHHHhChhHHHHhhc
Confidence 999999998754 899999999986 46778999999985 78998887643 22344555533
No 276
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.1e-35 Score=320.78 Aligned_cols=202 Identities=28% Similarity=0.409 Sum_probs=167.2
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEc-cCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCE-QNDIHSP 915 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~-Q~~~~~~ 915 (1085)
++.+.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |.+.+++
T Consensus 31 ~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 31 YREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 355789999999999999999999999999999999999866 468999999986432 23456799997 5566778
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.+|++|++.+....+. ....+..+.++++++.+++.+..+..+ ..||+|||||++||+||+.+|++|+||||
T Consensus 109 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 180 (236)
T cd03267 109 DLPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEP 180 (236)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 8999999987643321 122333445678899999877666543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
|+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 181 t~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 181 TIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999998764 899999999986 46788999999985 6777654
No 277
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=320.58 Aligned_cols=203 Identities=27% Similarity=0.390 Sum_probs=171.4
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh-cccceEEEEccCCCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gy~~Q~~~~~~~~t 918 (1085)
+++.+++|+||++++|++++|+|+||||||||+++|+|..+ +..|+|.++|.+.... ..++.+||++|++..++.+|
T Consensus 11 ~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (232)
T cd03300 11 GGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLT 88 (232)
T ss_pred CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcceEEEecccccCCCCc
Confidence 44579999999999999999999999999999999999876 4689999999876431 23467999999999888899
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsg 998 (1085)
++||+.+....+. .......+.++++++.+++.+..+... ..||+|||||++|||||+.+|++++|||||+|
T Consensus 89 ~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~g 160 (232)
T cd03300 89 VFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQRVAIARALVNEPKVLLLDEPLGA 160 (232)
T ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999987644331 122333456788999999987666543 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 999 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 161 LD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 161 LDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 9999999999999998764 899999999986 46788999999985 688888763
No 278
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=3.8e-34 Score=356.64 Aligned_cols=124 Identities=25% Similarity=0.363 Sum_probs=100.3
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhcCC---CEEE
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANP---SIVF 991 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p---~ill 991 (1085)
.+|+.|++.|...+. . .....+.++.++|..+ .+.. +..||||||||+.||++|+.+| +++|
T Consensus 791 ~ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 367888887754321 1 1123567888888653 3332 2579999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEe-----cCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~-----~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.....+++.|+++.++|.|||+++|+++ ..+.+|+++.|. +||++++.|+..
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~ 923 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTPE 923 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCHH
Confidence 99999999999999999999999888999999999975 446799999994 579999998753
No 279
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.4e-35 Score=340.11 Aligned_cols=195 Identities=27% Similarity=0.398 Sum_probs=167.3
Q ss_pred eeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------hcccceEEEEccCCCCCCCCCH
Q 001400 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 919 (1085)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gy~~Q~~~~~~~~tv 919 (1085)
|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 9999999999999999999999999999999876 468999999987532 1245679999999999999999
Q ss_pred HHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Q 001400 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1085)
Q Consensus 920 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgL 999 (1085)
+||+.|+.... ......+.++++++.+++.+..+... .+||||||||++|||||+.+|++|||||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998864321 11233456788999999987766543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 1000 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+.++..+++.|+++.++ |.|||++||+++ ++...+|++++|++ |+++..|+..
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 217 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPIA 217 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCHH
Confidence 999999999999999765 899999999986 57788999999985 7888888753
No 280
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.7e-35 Score=316.76 Aligned_cols=198 Identities=24% Similarity=0.298 Sum_probs=165.6
Q ss_pred EeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHHHH
Q 001400 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLES 922 (1085)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gy~~Q~~~~~~~~tv~e~ 922 (1085)
.++|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|++||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3569999999999999999999999999999999876 468999999987643 2345679999999999989999999
Q ss_pred HHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHH
Q 001400 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1085)
Q Consensus 923 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~ 1002 (1085)
+.+...... . ........++++++.+++.+..+... ..||+|||||++|||||+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 976532111 1 11123445778999999976665543 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecC
Q 001400 1003 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1085)
Q Consensus 1003 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~ 1053 (1085)
++..+.+.|+++.++ |.|||++||+++ .+.+.+|++++|++ |+++..|+
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999986 46678999999974 78888765
No 281
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=328.76 Aligned_cols=202 Identities=28% Similarity=0.354 Sum_probs=169.0
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-----hcccceEEEEccCCC-CCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HSP 915 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~-~~~ 915 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 469999999999999999999999999999999999866 468999999987631 234567999999863 334
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
..||.||+.+..... .....+..+.+.++++.+++.+..+... ..||+|||||++|||||+.+|++|+||||
T Consensus 93 ~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEP 164 (275)
T PRK13639 93 APTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLSGGQKKRVAIAGILAMKPEIIVLDEP 164 (275)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 579999998764321 1223334456788999999987766543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+|||+.++..+++.|+++.++|.|||++||+++ .+.+.||++++|++ |++++.|+..
T Consensus 165 t~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (275)
T PRK13639 165 TSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIKEGTPK 222 (275)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999777999999999986 46778999999985 6888888754
No 282
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=358.28 Aligned_cols=220 Identities=22% Similarity=0.316 Sum_probs=179.1
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh----cccceEEEEccCCCC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIH 913 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gy~~Q~~~~ 913 (1085)
.+++..+|+||||+|++||++||+||||||||||+++|+|..++++.+|+|.++|.++... ..++.+||++|++.+
T Consensus 14 ~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (506)
T PRK13549 14 TFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAGIAIIHQELAL 93 (506)
T ss_pred EeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCCeEEEEecccc
Confidence 3455679999999999999999999999999999999999865333689999999876431 234669999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
++.+||+||+.+....+...........+.++++++.+++.+..+..+ .+||||||||++|||||+.+|+|||||
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLD 168 (506)
T PRK13549 94 VKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGLGQQQLVEIAKALNKQARLLILD 168 (506)
T ss_pred CCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 899999999988643221111122333456788999999977666543 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc-hHHHHHH
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK-SCELIKY 1064 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~-~~~~~~~ 1064 (1085)
|||+|||+.++..+++.|+++.++|.|||++|||++ .+.+.||++++|++ |++++.|+..+. ..++++.
T Consensus 169 EPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~~~~~~~~~ 238 (506)
T PRK13549 169 EPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGTRPAAGMTEDDIITM 238 (506)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeeecccccCCHHHHHHH
Confidence 999999999999999999999877999999999986 46778999999985 689998887653 2334443
No 283
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.1e-35 Score=321.15 Aligned_cols=205 Identities=33% Similarity=0.506 Sum_probs=164.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1085)
+++|+|+|++|++||+++|+||||||||||+++|+|.+++..+.+|+|.++|+++.....++.++|++|++.+++.+||+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 99 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVR 99 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcHH
Confidence 57999999999999999999999999999999999998721123999999998875434467899999999989999999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHH-HHHHhCCcccccccccCccccc
Q 001400 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY-IMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
||+.|+.......... .+ .....++. .++.+++++..++. ++.
T Consensus 100 enl~~~~~~~~~~~~~---~~----------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~ 143 (226)
T cd03234 100 ETLTYTAILRLPRKSS---DA----------------------------IRKKRVEDVLLRDLALTRIGGNL-----VKG 143 (226)
T ss_pred HHHHHHHHhhcccccc---hH----------------------------HHHHHHHHHHHHhhcchhhhccc-----ccC
Confidence 9999865432211000 00 00112344 78888887665554 456
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecCh-hHHHhhcCeEEEecCCe
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA-PEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~-~~~~~~~D~ii~L~~G~ 385 (1085)
|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.++++.+. +.|+++ ++|.. .++.+++|++++|++|+
T Consensus 144 LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~-~~tiii-~sh~~~~~~~~~~d~i~~l~~G~ 221 (226)
T cd03234 144 ISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR-NRIVIL-TIHQPRSDLFRLFDRILLLSSGE 221 (226)
T ss_pred cCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEE-EecCCCHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999988653 455555 55555 68999999999999999
Q ss_pred EEEec
Q 001400 386 IVYQG 390 (1085)
Q Consensus 386 iv~~G 390 (1085)
+++.|
T Consensus 222 i~~~g 226 (226)
T cd03234 222 IVYSG 226 (226)
T ss_pred EEecC
Confidence 99875
No 284
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=316.75 Aligned_cols=198 Identities=26% Similarity=0.364 Sum_probs=164.8
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------hcccceEEEEccC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQN 910 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gy~~Q~ 910 (1085)
.++++.+ ||||+|++ |+++|+|+||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|+
T Consensus 9 ~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~ 83 (214)
T cd03297 9 RLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQ 83 (214)
T ss_pred ecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecC
Confidence 3455555 99999999 9999999999999999999999866 468999999987531 1245679999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 911 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
+.+++.+|++||+.+..... .....++.++++++.+++.+..+.. +..||+|||||++|||||+.+|++|
T Consensus 84 ~~~~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 153 (214)
T cd03297 84 YALFPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELL 153 (214)
T ss_pred CccCCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 98888999999998764221 1223345678899999987655543 3579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
+|||||+|||+.+++.+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 154 LLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999999999999765 899999999986 46678999999985 6877654
No 285
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.2e-35 Score=334.37 Aligned_cols=210 Identities=20% Similarity=0.254 Sum_probs=170.3
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC-eeeeEEEEcCccCCh---hc---c-cceEEEEccCC-
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQ---ET---F-ARISGYCEQND- 911 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~~~~---~~---~-~~~~gy~~Q~~- 911 (1085)
...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.++.. .. + ++.++|++|++
T Consensus 28 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 107 (330)
T PRK09473 28 DVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPM 107 (330)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCch
Confidence 357999999999999999999999999999999999986531 238999999987642 11 2 24799999998
Q ss_pred -CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 912 -IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 912 -~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
.+.|.+|+.+++.+...... .....+..+.+.++++.+++.+..+.... .+.+||||||||++|||||+.+|+||
T Consensus 108 ~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~~~--~p~~LSgG~~QRv~IArAL~~~P~ll 183 (330)
T PRK09473 108 TSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRMKM--YPHEFSGGMRQRVMIAMALLCRPKLL 183 (330)
T ss_pred hhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHhcC--CcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 57789999999876543321 12334445667888999988653322212 23689999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|+||||++||+.++..+++.|+++.++ |.|||+||||++ .+.+.+|++++|. .|++++.|+..+
T Consensus 184 ilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~-~G~ive~g~~~~ 248 (330)
T PRK09473 184 IADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMY-AGRTMEYGNARD 248 (330)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCHHH
Confidence 999999999999999999999999765 899999999986 3667899999998 479999997543
No 286
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.9e-35 Score=318.74 Aligned_cols=201 Identities=28% Similarity=0.353 Sum_probs=162.7
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCC--CC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--WQ 220 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 220 (1085)
++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999998776 999999999875432 245799999998 45
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-ccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLV 299 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 299 (1085)
++.+||+||+.+.....+.... + + ......+++++.+||. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~-~--------~-----------------------~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSK-K--------E-----------------------ARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcH-H--------H-----------------------HHHHHHHHHHHHCCCChhHhhCCc
Confidence 6789999999876433211000 0 0 0011134678888985 4455444
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..++|+++
T Consensus 144 -----~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 -----HELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEEL-GLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEE
Confidence 4699999999999999999999999999999999999999999999987532 3456667888889999999999
Q ss_pred EecCCeEEEec
Q 001400 380 LLSEGQIVYQG 390 (1085)
Q Consensus 380 ~L~~G~iv~~G 390 (1085)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 287
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.2e-35 Score=320.99 Aligned_cols=205 Identities=29% Similarity=0.395 Sum_probs=172.5
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh-cccceEEEEccCCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGL 917 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gy~~Q~~~~~~~~ 917 (1085)
+++..+|+|+||++.+||+++|+|+||||||||+++|+|..+ +..|+|.++|.++... ..++.++|++|++.+++..
T Consensus 10 ~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 87 (237)
T TIGR00968 10 FGSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHL 87 (237)
T ss_pred ECCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCC
Confidence 345679999999999999999999999999999999999866 4689999999876532 2346799999999888899
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
|+.||+.+....+. .......+.++++++.+++.+..+... ..||+||+||++|||+|+.+|++++|||||+
T Consensus 88 t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~ 159 (237)
T TIGR00968 88 TVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFG 159 (237)
T ss_pred cHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987654321 122233456788999999876666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.+
T Consensus 160 ~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 216 (237)
T TIGR00968 160 ALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSPD 216 (237)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCHH
Confidence 99999999999999998765 899999999986 46788999999984 7888888754
No 288
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.5e-36 Score=367.44 Aligned_cols=214 Identities=26% Similarity=0.400 Sum_probs=177.3
Q ss_pred cCCCcceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCC
Q 001400 142 RGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQD 218 (1085)
Q Consensus 142 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d 218 (1085)
++.+++.+||+|+|+.|++|+.+||||||||||||.+.+|-..++|. +|.|.++|+++++... ++.+|.|+|+|
T Consensus 997 YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQEP 1073 (1228)
T KOG0055|consen 997 YPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQEP 1073 (1228)
T ss_pred CCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccCc
Confidence 44567889999999999999999999999999999999999999886 9999999999988764 58899999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccc
Q 001400 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1085)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1085)
.+|.. |+||||.|+... -..+.+.++++. ++ ..+. +.+|++++||.
T Consensus 1074 ~LF~~-TIrENI~YG~~~----vs~~eIi~Aak~---AN-----------------------aH~F---I~sLP~GyDT~ 1119 (1228)
T KOG0055|consen 1074 VLFNG-TIRENIAYGSEE----VSEEEIIEAAKL---AN-----------------------AHNF---ISSLPQGYDTR 1119 (1228)
T ss_pred hhhcc-cHHHHHhccCCC----CCHHHHHHHHHH---hh-----------------------hHHH---HhcCcCcccCc
Confidence 97764 999999997211 111222222211 11 1112 45799999999
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
||+++. +||||||||++||||++.||+||+|||.||+||+.+...+.+.|.+... ++|+|++. |- ..+..-+|.|
T Consensus 1120 vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~--gRT~IvIA-HR-LSTIqnaD~I 1194 (1228)
T KOG0055|consen 1120 VGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAME--GRTTIVIA-HR-LSTIQNADVI 1194 (1228)
T ss_pred cCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhc--CCcEEEEe-cc-hhhhhcCCEE
Confidence 998665 7999999999999999999999999999999999999999999998753 57777644 43 4567889999
Q ss_pred EEecCCeEEEecChhhHHH
Q 001400 379 ILLSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~~ 397 (1085)
+|+++|+|+++|++++++.
T Consensus 1195 ~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1195 AVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred EEEECCEEEecccHHHHHh
Confidence 9999999999999999975
No 289
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=323.25 Aligned_cols=199 Identities=25% Similarity=0.343 Sum_probs=165.8
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~ 916 (1085)
++..+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 14 ~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~- 90 (241)
T PRK14250 14 FGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE- 90 (241)
T ss_pred CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcChHHhhhcEEEEecCchhch-
Confidence 44579999999999999999999999999999999999865 468999999987532 234567999999988776
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.|++||+.+....+ . .....++++++.+++. +..+.. +..||+|||||++|||||+.+|++||||||
T Consensus 91 ~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEP 158 (241)
T PRK14250 91 GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSGGEAQRVSIARTLANNPEVLLLDEP 158 (241)
T ss_pred hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 69999997653221 1 1123567888999985 444443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 159 t~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 217 (241)
T PRK14250 159 TSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVEYAKTY 217 (241)
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEeCCHH
Confidence 9999999999999999998764 999999999986 46778999999985 6888887754
No 290
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.5e-35 Score=323.42 Aligned_cols=205 Identities=20% Similarity=0.337 Sum_probs=171.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-----CCCceEEEEccCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQVA 222 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 222 (1085)
+.+|+|+|+++++||+++|+||||||||||+++|+|.+++. +|+|.++|.++... ..++.++|++|++..++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 36999999999999999999999999999999999998776 99999999887542 12457999999998888
Q ss_pred CCCHHHHHHHhhhh-cCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 223 EMTVRETLDFAGQC-QGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
.+||+||+.|+... .+.. . ......++++++.+||+...+..+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~-- 134 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------K------------------------EEAEKQARELLAKVGLAERAHHYP-- 134 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChHHHhcCh--
Confidence 99999999875321 1100 0 001123678899999987666544
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
+.|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.+. +++|+.++|+.+++..++|++++|
T Consensus 135 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 135 ---SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEE--GMTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred ---hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999988643 455666788889999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999987764
No 291
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=335.02 Aligned_cols=211 Identities=16% Similarity=0.218 Sum_probs=168.1
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC--CeeeeEEEEcCccCCh---hc----ccceEEEEccCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQ---ET----FARISGYCEQND 911 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~--~~~~G~i~i~g~~~~~---~~----~~~~~gy~~Q~~ 911 (1085)
...+|+||||+|++||++||+|+||||||||+++|+|.... .+.+|+|.++|.++.. .. +++.++|++|++
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~ 98 (330)
T PRK15093 19 WVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEP 98 (330)
T ss_pred CEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCc
Confidence 46799999999999999999999999999999999997642 2468999999987532 11 234799999997
Q ss_pred C--CCCCCCHHHHHHHhhhhcCCCc---ccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcC
Q 001400 912 I--HSPGLTVLESLLFSAWLRLPSE---IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1085)
Q Consensus 912 ~--~~~~~tv~e~l~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~ 986 (1085)
. +.|.+||.+++.+......... ....+..+.+.++++.++|.+..+..... +.+|||||||||+|||||+.+
T Consensus 99 ~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~--p~~LSgG~~QRv~iArAL~~~ 176 (330)
T PRK15093 99 QSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSF--PYELTEGECQKVMIAIALANQ 176 (330)
T ss_pred chhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCC--chhCCHHHHHHHHHHHHHHCC
Confidence 6 5688999999975322110000 01123345678999999997532211112 358999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 987 p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+||||||||+|||+.++..++++|+++.++ |.|||+||||++ .+.+.+|++++|.+ |++++.|+..
T Consensus 177 P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~vm~~-G~ive~g~~~ 244 (330)
T PRK15093 177 PRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKINVLYC-GQTVETAPSK 244 (330)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999999999999999764 999999999986 46688999999984 7999998754
No 292
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=292.22 Aligned_cols=206 Identities=25% Similarity=0.361 Sum_probs=177.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1085)
+.+|+|+|+.|.+|+.++++||||||||||||+++|..+|. .|+|.+||.+++- |...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 56999999999999999999999999999999999999886 9999999998764 333458999999999999999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccC
Q 001400 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1085)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1085)
+|++|+.++.|..+. .| ..++.+.+...||+...+.. +-+|
T Consensus 93 dNvafgL~l~Gi~k~-------~R---------------------------~~~a~q~l~~VgL~~~~~~~-----i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QR---------------------------REIAHQMLALVGLEGAEHKY-----IWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HH---------------------------HHHHHHHHHHhCcccccccc-----eEee
Confidence 999999998876432 11 22467788999999876654 4579
Q ss_pred chhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec--CCe
Q 001400 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS--EGQ 385 (1085)
Q Consensus 308 SGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~--~G~ 385 (1085)
||||||||.|||||..+|+.|+||||+.+||.-++.++.+.|-++.+..++. ++.++|+.+|+.-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~-~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQ-VLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCe-EEEEeccHHHHHhhhheeEEecCCCce
Confidence 9999999999999999999999999999999999999999999988776554 5558899999999999999997 489
Q ss_pred EEEecChhhHHHH
Q 001400 386 IVYQGPRVSVLDF 398 (1085)
Q Consensus 386 iv~~G~~~~~~~~ 398 (1085)
|+..=+.+-...|
T Consensus 213 vv~~~~~df~rR~ 225 (259)
T COG4525 213 VVERLPLDFARRY 225 (259)
T ss_pred eeEecCCCHHHHh
Confidence 9987776644443
No 293
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=332.01 Aligned_cols=207 Identities=20% Similarity=0.228 Sum_probs=174.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCC--C
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 219 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d--~ 219 (1085)
+.+|+|||+.|++||+++|+|+||||||||+++|+|.+++. +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999998775 899999999876542 245799999997 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcc-ccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTL 298 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 298 (1085)
+.+.+||.+++.+..+...... . .+...++.++++.+||+. .+++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLS---------A------------------------AERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCC---------H------------------------HHHHHHHHHHHHHCCCChHHhcCC
Confidence 7889999999977543321000 0 001234788999999963 45554
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
+..|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+.. +++++.++|+...+..++|+|
T Consensus 152 -----p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 -----PHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQEL-GLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred -----CccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 45799999999999999999999999999999999999999999999987643 456777899999999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 001400 379 ILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~ 396 (1085)
++|++|++++.|+.+++.
T Consensus 226 ~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999998875
No 294
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-35 Score=311.37 Aligned_cols=196 Identities=31% Similarity=0.580 Sum_probs=160.2
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC-eeeeEEEEcCcc
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYP 894 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~ 894 (1085)
.++|+|++|.++.. .++..+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 46788888877432 13567999999999999999999999999999999999976522 568999999987
Q ss_pred CCh--hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001400 895 KRQ--ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTE 972 (1085)
Q Consensus 895 ~~~--~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~G 972 (1085)
... ...++.++|++|++.+++.+||+||+.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 235667999999999999999999997653110 1111 2479999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEe
Q 001400 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1085)
Q Consensus 973 qrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~ 1051 (1085)
||||++|||||+.+|++|||||||+|||+.+++.+++.|+++.++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999998765 677777665532357788999999985 688765
Q ss_pred c
Q 001400 1052 G 1052 (1085)
Q Consensus 1052 g 1052 (1085)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 295
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.9e-35 Score=321.42 Aligned_cols=206 Identities=23% Similarity=0.365 Sum_probs=169.3
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
.+|+|+|++|++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5999999999999999999999999999999999998753 12389999999987542 1246799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc----ccccc
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 297 (1085)
+ +||+||+.+.....+.... ......++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 9999999886433210000 00112367788999997 44454
Q ss_pred cccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCe
Q 001400 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1085)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1085)
. ++.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+..++.+++|+
T Consensus 141 ~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 S-----ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 3 457999999999999999999999999999999999999999999999865 3 4566688999999999999
Q ss_pred EEEecCCeEEEecChhhHH
Q 001400 378 VILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 378 ii~L~~G~iv~~G~~~~~~ 396 (1085)
+++|++|++++.|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999987763
No 296
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=331.18 Aligned_cols=201 Identities=20% Similarity=0.287 Sum_probs=165.0
Q ss_pred EEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCC--------hhcccceEEEEccCCCC-
Q 001400 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR--------QETFARISGYCEQNDIH- 913 (1085)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~--------~~~~~~~~gy~~Q~~~~- 913 (1085)
.+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++. ...+++.++|++|++..
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~ 102 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQ 102 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEccccccccccHHHHhccEEEEEeCcchh
Confidence 59999999999999999999999999999999999876 46899999998752 12345679999999742
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
....|++||+.|..... ........+.++++++.+++. +..+.. +..||+|||||++|||||+.+|++|||
T Consensus 103 ~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~lLlL 174 (289)
T PRK13645 103 LFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS-----PFELSGGQKRRVALAGIIAMDGNTLVL 174 (289)
T ss_pred hhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 23469999998764322 112233345577888988884 455543 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 175 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 236 (289)
T PRK13645 175 DEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE-GKVISIGSPF 236 (289)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999999999876 4899999999986 47788999999985 6888888753
No 297
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.9e-35 Score=324.61 Aligned_cols=205 Identities=21% Similarity=0.308 Sum_probs=170.3
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-----------CCCceEEEEccC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----------VPPRTSAYVSQQ 217 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----------~~~~~~~yv~Q~ 217 (1085)
.+|+|+|++|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++... ..++.++|++|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5999999999999999999999999999999999998776 99999999876532 123579999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccc
Q 001400 218 DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1085)
Q Consensus 218 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1085)
+.+++.+||+||+.++..... +... ......++++++.+||+...|+
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~-~~~~--------------------------------~~~~~~~~~~l~~~gl~~~~~~ 140 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVK-GEPK--------------------------------EEATARARELLAKVGLAGKETS 140 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhc-CCCH--------------------------------HHHHHHHHHHHHHcCCcchhhC
Confidence 988888999999987532110 0000 0011236778899999876665
Q ss_pred cccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCe
Q 001400 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1085)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1085)
.+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. +.+|+.++|+.+++.+++|+
T Consensus 141 ~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tvi~~tH~~~~~~~~~d~ 213 (250)
T PRK11264 141 YP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQE--KRTMVIVTHEMSFARDVADR 213 (250)
T ss_pred Ch-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHhcCE
Confidence 44 569999999999999999999999999999999999999999999998753 44566688999999999999
Q ss_pred EEEecCCeEEEecChhhHH
Q 001400 378 VILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 378 ii~L~~G~iv~~G~~~~~~ 396 (1085)
+++|++|++++.|+.+++.
T Consensus 214 i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 214 AIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999987663
No 298
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.8e-35 Score=317.22 Aligned_cols=196 Identities=20% Similarity=0.337 Sum_probs=161.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1085)
+++|+|+|+.+++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999998876 9999999988755322 1469999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++.+||+||+.+......... . +....+.++++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------K------------------------EAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------H------------------------HHHHHHHHHHHHcCChhhhhCCh-
Confidence 889999999988543211000 0 00123667889999987666554
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
..|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++++..+ .+|+.++|+..++. .+|++++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELN-TSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHh-hcCEEEE
Confidence 46999999999999999999999999999999999999999999999875434 45555777777775 4799999
Q ss_pred ecCCeEE
Q 001400 381 LSEGQIV 387 (1085)
Q Consensus 381 L~~G~iv 387 (1085)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 299
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=6.7e-34 Score=366.78 Aligned_cols=135 Identities=21% Similarity=0.331 Sum_probs=105.8
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHh---cCCC
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELV---ANPS 988 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~aL~---~~p~ 988 (1085)
.+...||.|+|.++..-.........+..+.+ ++++.+++..+ .+.. +..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44578999999876532111111122333445 47888888765 4443 2579999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEe-----cCcEEEEecCCC
Q 001400 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPLG 1055 (1085)
Q Consensus 989 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~-----~gG~~~~~g~~~ 1055 (1085)
++||||||+|||+.+...+++.|++++++|.|||+++|+++. + +.+|++++|. .||++++.|+..
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~-i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHV-V-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 999999999999999999999999998889999999999863 4 8899999995 368999998764
No 300
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=328.34 Aligned_cols=206 Identities=26% Similarity=0.350 Sum_probs=171.0
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-----CCCceEEEEccCCC-CCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDW-QVA 222 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~~ 222 (1085)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|. +|+|.++|+++... ..++.++|++|++. .+.
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 5999999999999999999999999999999999998876 99999999987421 12357999999973 345
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
..||+||+.+.....+... . .....++++++.+||.+..++.+
T Consensus 97 ~~tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~gL~~~~~~~~--- 139 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLPE----------D------------------------EVRKRVDNALKRTGIEHLKDKPT--- 139 (283)
T ss_pred cccHHHHHHhHHHHcCCCH----------H------------------------HHHHHHHHHHHHCCChhhhhCCc---
Confidence 6799999988543221100 0 01124788899999987776554
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..+||++++|+
T Consensus 140 --~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 140 --HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKEL-GLTIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 5699999999999999999999999999999999999999999999987643 4556668899999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 001400 383 EGQIVYQGPRVSVLD 397 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1085)
+|++++.|+.+++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999887753
No 301
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=327.34 Aligned_cols=208 Identities=23% Similarity=0.279 Sum_probs=165.6
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCC-----hhcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKR-----QETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~-----~~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|.... .+.+|+|.++|.++. ...+++.++|++|++
T Consensus 24 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 103 (269)
T PRK14259 24 GTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQP 103 (269)
T ss_pred CCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCC
Confidence 445799999999999999999999999999999999997541 136899999998753 223456799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++. |++||+.+....+. .. ....+.++++++.+++......... ..+..||+|||||++|||||+.+|++||
T Consensus 104 ~l~~~-tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~G~~qrl~laral~~~p~lll 177 (269)
T PRK14259 104 NPFPK-SIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLN-ESGYSLSGGQQQRLCIARTIAIEPEVIL 177 (269)
T ss_pred ccchh-hHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhC-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88874 99999987653321 11 1223456677888876421111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEec----------CcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR----------GGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~----------gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..++++|++++ ++.|||++||+++ ++.+.||++++|++ +|++++.|+.+
T Consensus 178 LDEPt~gLD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~i~~l~~~~~~~~~~g~~g~~~~~~~~~ 249 (269)
T PRK14259 178 MDEPCSALDPISTLKIEETMHELK-KNFTIVIVTHNMQ-QAVRVSDMTAFFNAEEVEGGSGGKVGYLVEFNETK 249 (269)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhcCEEEEEeccccccccccccceEEEeCCHH
Confidence 999999999999999999999985 4799999999986 57789999999985 36789988764
No 302
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.1e-35 Score=326.71 Aligned_cols=203 Identities=21% Similarity=0.310 Sum_probs=167.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCC--CCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI--HSPG 916 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~--~~~~ 916 (1085)
..+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++. +++.
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 103 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPR 103 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCchhhHhccEEEEecCchhhcCcc
Confidence 469999999999999999999999999999999999876 568999999987642 123457999999875 5678
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
+|+.+++.+...... ........+.++++++.+++. ...+.. +..||+|||||++|||||+.+|+|||||||
T Consensus 104 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLDEP 176 (267)
T PRK15112 104 QRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLAPGQKQRLGLARALILRPKVIIADEA 176 (267)
T ss_pred hhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcCHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 899999987643321 112233345678899999984 444433 257999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|+|||+.++..+.+.|+++.++ |.|||++||+++ ++...||++++|++ |++++.|+..
T Consensus 177 t~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 235 (267)
T PRK15112 177 LASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVVERGSTA 235 (267)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCHH
Confidence 9999999999999999999764 899999999986 46677999999985 7888888754
No 303
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.7e-35 Score=320.38 Aligned_cols=206 Identities=25% Similarity=0.386 Sum_probs=170.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC--CceEEEEccCCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP--PRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 225 (1085)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999998876 9999999987754321 257999999988888999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.+.....+... ......++++++.+||++..++.++
T Consensus 91 ~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 131 (236)
T TIGR03864 91 VRQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR----- 131 (236)
T ss_pred HHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----
Confidence 9999987543221000 0001236778889999877776554
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++++.++|..+++.. +|++++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~-~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQ-GLSVLWATHLVDEIEA-DDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecChhhHhh-CCEEEEEeCCe
Confidence 699999999999999999999999999999999999999999999987533 3456667788888864 99999999999
Q ss_pred EEEecChhhHHH
Q 001400 386 IVYQGPRVSVLD 397 (1085)
Q Consensus 386 iv~~G~~~~~~~ 397 (1085)
+++.|+.+++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999998877643
No 304
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=324.78 Aligned_cols=204 Identities=24% Similarity=0.289 Sum_probs=166.2
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC--C-CeeeeEEEEcCccCCh-----hcccceEEEEccCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~ 912 (1085)
+..+|+|+||+|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 25 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 104 (260)
T PRK10744 25 KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPT 104 (260)
T ss_pred CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCc
Confidence 4569999999999999999999999999999999999753 1 1358999999987631 234677999999988
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc----ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ 988 (1085)
+++ .|++||+.+...... ........+.++++++.+++.+ ..+.. +.+||+|||||++|||||+.+|+
T Consensus 105 ~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~ 176 (260)
T PRK10744 105 PFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS-----GYSLSGGQQQRLCIARGIAIRPE 176 (260)
T ss_pred cCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC-----CCCCCHHHHHHHHHHHHHHCCCC
Confidence 777 799999987643221 1222333456788999988743 22222 35799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 989 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||||||+|||+.++..+.+.|+++. ++.|||++||+++ .+.+.+|++++|++ |+++..|+..
T Consensus 177 lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 240 (260)
T PRK10744 177 VLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFMYL-GELIEFGNTD 240 (260)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999999999999985 4789999999986 46678999999985 7888888753
No 305
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=322.07 Aligned_cols=200 Identities=27% Similarity=0.381 Sum_probs=167.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1085)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.. ..+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999998876 9999999988753 234689999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccC
Q 001400 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1085)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1085)
||+.+.....+... . .....++++++.+||++..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~gl~~~~~~~~-----~~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVEK----------M------------------------QRLEIAHQMLKKVGLEGAEKRYI-----WQL 129 (255)
T ss_pred HHHHhHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 99987543221000 0 01124778899999987666544 469
Q ss_pred chhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec--CCe
Q 001400 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS--EGQ 385 (1085)
Q Consensus 308 SGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~--~G~ 385 (1085)
||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..++|+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 9999999999999999999999999999999999999999999985433 4556668899999999999999998 599
Q ss_pred EEEecCh
Q 001400 386 IVYQGPR 392 (1085)
Q Consensus 386 iv~~G~~ 392 (1085)
++..++.
T Consensus 209 i~~~~~~ 215 (255)
T PRK11248 209 VVERLPL 215 (255)
T ss_pred EEEEecC
Confidence 9998864
No 306
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-36 Score=298.94 Aligned_cols=226 Identities=23% Similarity=0.363 Sum_probs=193.7
Q ss_pred cccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEE
Q 001400 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYC 907 (1085)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~ 907 (1085)
++++.++.++.+.+|+++|+.|++|.+++++|||||||||||.+++++.. ..+|+|+++|.++.. ...++.++..
T Consensus 3 ~i~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSIL 80 (252)
T COG4604 3 TIENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSIL 80 (252)
T ss_pred eehhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHH
Confidence 34556667789999999999999999999999999999999999998766 568999999998643 4567788888
Q ss_pred ccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 908 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 908 ~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
-|+......+||+|-+.|+..-. .......+.+..++++++.++|.++.+... .+||||||||.-||+.|+++.
T Consensus 81 kQ~N~i~~rlTV~dLv~FGRfPY-SqGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdT 154 (252)
T COG4604 81 KQENHINSRLTVRDLVGFGRFPY-SQGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDT 154 (252)
T ss_pred HhhchhhheeEHHHHhhcCCCcc-cCCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccC
Confidence 89887778999999999984321 223345667788999999999999999875 579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC--chHHHHHH
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS--KSCELIKY 1064 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~--~~~~~~~~ 1064 (1085)
+.++||||.++||......+|+.+++++++ |+|||++.||.++ ..-.+|+|+-|++ |+++..|+..+ ..+.+-+-
T Consensus 155 dyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~eii~~~~L~ei 232 (252)
T COG4604 155 DYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDEIIQPEILSEI 232 (252)
T ss_pred cEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHHhcCHHHHHHH
Confidence 999999999999999999999999999876 9999999999885 5567799999985 79999999876 34556666
Q ss_pred HH
Q 001400 1065 FE 1066 (1085)
Q Consensus 1065 ~~ 1066 (1085)
|+
T Consensus 233 yd 234 (252)
T COG4604 233 YD 234 (252)
T ss_pred hc
Confidence 65
No 307
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-35 Score=324.99 Aligned_cols=209 Identities=23% Similarity=0.281 Sum_probs=166.6
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++.. ..+++.+||++|++
T Consensus 30 ~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 109 (267)
T PRK14235 30 GEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKP 109 (267)
T ss_pred CCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCC
Confidence 345799999999999999999999999999999999997542 1368999999987632 23466799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++. |+.||+.+....+.. ........+.++++++.+++.+....... ..+..||+|||||++|||||+.+|++||
T Consensus 110 ~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgGq~qrv~laral~~~p~lll 186 (267)
T PRK14235 110 NPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGTGLSGGQQQRLCIARAIAVSPEVIL 186 (267)
T ss_pred CCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 88775 999999886533211 01122334557888999988542111111 1135799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+...+|++++|++ |+++..|+.
T Consensus 187 LDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 246 (267)
T PRK14235 187 MDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GNLVEVGDT 246 (267)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999864 789999999986 46678999999985 788888864
No 308
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=322.30 Aligned_cols=194 Identities=23% Similarity=0.285 Sum_probs=165.2
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHH
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRE 228 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 228 (1085)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5999999999999999999999999999999999998876 9999999976532 2467999999998888899999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCc
Q 001400 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1085)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1085)
|+.+... . . ....++.+++.+||.+..+..+ ..||
T Consensus 101 nl~~~~~----~-~-----------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~LS 135 (257)
T PRK11247 101 NVGLGLK----G-Q-----------------------------------WRDAALQALAAVGLADRANEWP-----AALS 135 (257)
T ss_pred HHHhccc----c-h-----------------------------------HHHHHHHHHHHcCChhHhcCCh-----hhCC
Confidence 9987421 0 0 0113567888999987666544 5699
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEE
Q 001400 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1085)
Q Consensus 309 GGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~ 388 (1085)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+ .+|+.++|+..++..++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHG-FTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999999999999999999999998865433 456668888889999999999999999999
Q ss_pred ecChh
Q 001400 389 QGPRV 393 (1085)
Q Consensus 389 ~G~~~ 393 (1085)
.|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88753
No 309
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=317.42 Aligned_cols=197 Identities=28% Similarity=0.428 Sum_probs=166.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1085)
.++|+|+|+++++| +++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 36999999999999 99999999999999999999998876 999999998765432 2467999999999899999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.+.....+... . +....++.+++.+||++..++.+ .
T Consensus 89 v~~~l~~~~~~~~~~~--------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 129 (211)
T cd03264 89 VREFLDYIAWLKGIPS--------------------K--------------EVKARVDEVLELVNLGDRAKKKI-----G 129 (211)
T ss_pred HHHHHHHHHHHhCCCH--------------------H--------------HHHHHHHHHHHHCCCHHHHhCch-----h
Confidence 9999987543321100 0 00123678899999987777655 4
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ + ++++.++|+.+++.+++|++++|++|+
T Consensus 130 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 130 SLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 566678899999999999999999999
Q ss_pred EEEec
Q 001400 386 IVYQG 390 (1085)
Q Consensus 386 iv~~G 390 (1085)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 310
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-35 Score=337.85 Aligned_cols=192 Identities=23% Similarity=0.365 Sum_probs=166.3
Q ss_pred eeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-------hcccceEEEEccCCCCCCCCCH
Q 001400 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 919 (1085)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gy~~Q~~~~~~~~tv 919 (1085)
|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 568999999987532 2245789999999999999999
Q ss_pred HHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Q 001400 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1085)
Q Consensus 920 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgL 999 (1085)
+||+.|+.. ....+.++++++.+++.+..+... .+||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987531 112345788999999987766543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 1000 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|+.++..+++.|+++.++ |.|||++|||++ ++...+|++++|++ |+++..|+..+
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~~ 215 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLEE 215 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHHH
Confidence 999999999999999765 899999999986 57788999999985 78998887543
No 311
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=329.15 Aligned_cols=201 Identities=23% Similarity=0.302 Sum_probs=168.3
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeee---eEEEEcCccCCh---hcccceEEEEccCCC-CC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIE---GDIYISGYPKRQ---ETFARISGYCEQNDI-HS 914 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~---G~i~i~g~~~~~---~~~~~~~gy~~Q~~~-~~ 914 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|...+ .+ |+|.++|.++.. ...++.+||++|++. .+
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p--~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~ 97 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLP--DDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQF 97 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCC--CCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhh
Confidence 4599999999999999999999999999999999998652 34 899999988643 234567999999974 56
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+..||+||+.|....+ .....+..+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|||||
T Consensus 98 ~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~G~~qrv~laral~~~P~llllDE 169 (282)
T PRK13640 98 VGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLSGGQKQRVAIAGILAVEPKIIILDE 169 (282)
T ss_pred ccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 7789999998764322 1223344456788999999987666543 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||+|||+.++..+++.|++++++ |.|||++||+++. + +.||++++|++ |++++.|+..
T Consensus 170 Pt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~~~g~~~ 228 (282)
T PRK13640 170 STSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLLAQGSPV 228 (282)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999998764 8999999999863 4 57999999985 7899888764
No 312
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=328.62 Aligned_cols=201 Identities=24% Similarity=0.302 Sum_probs=168.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCCCC-CCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIH-SPG 916 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~~~-~~~ 916 (1085)
+.+|+||||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++.. +..
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVA 100 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeccccccHHHHhhheEEEecChhhhhcc
Confidence 469999999999999999999999999999999999876 568999999987642 2346789999999742 335
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
.|+.|++.|..... .....+.++.++++++.+++.+..+... ..||+|||||++|||+|+.+|++|||||||
T Consensus 101 ~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 172 (280)
T PRK13633 101 TIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLSGGQKQRVAIAGILAMRPECIIFDEPT 172 (280)
T ss_pred ccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 69999998865322 1223344566889999999987766543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 997 SGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||+.++..+.+.|+++.+ .|.|||++||+++. +. .+|++++|++ |++++.|+..
T Consensus 173 ~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~~-~~d~v~~l~~-G~i~~~g~~~ 229 (280)
T PRK13633 173 AMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-AV-EADRIIVMDS-GKVVMEGTPK 229 (280)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-Hh-cCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999976 49999999999873 44 4999999985 7888888754
No 313
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-35 Score=337.35 Aligned_cols=228 Identities=25% Similarity=0.379 Sum_probs=193.2
Q ss_pred ccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEE
Q 001400 830 VELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISG 905 (1085)
Q Consensus 830 ~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g 905 (1085)
+++++.++.++..++|+||||++++||++||+|.||||||||+|+|+|..+ +.+|+|.++|.+... ......|+
T Consensus 9 l~~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~~~~sp~~A~~~GI~ 86 (500)
T COG1129 9 LELRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPVAFSSPRDALAAGIA 86 (500)
T ss_pred eeeecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEccCCCHHHHHhCCcE
Confidence 345666777888999999999999999999999999999999999999876 579999999987542 33556799
Q ss_pred EEccCCCCCCCCCHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHh
Q 001400 906 YCEQNDIHSPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV 984 (1085)
Q Consensus 906 y~~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~ 984 (1085)
.|.|+..+.|++||.||+.++...+.+ .-++.+...+...++|+.+++....+..+ .+||.||||.|.|||||.
T Consensus 87 ~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v-----~~LsiaqrQ~VeIArAl~ 161 (500)
T COG1129 87 TVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLV-----GDLSIAQRQMVEIARALS 161 (500)
T ss_pred EEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhh-----hhCCHHHHHHHHHHHHHh
Confidence 999999999999999999887554331 23455666777889999998853344443 579999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecC-CCC-chHHHH
Q 001400 985 ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP-LGS-KSCELI 1062 (1085)
Q Consensus 985 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~-~~~-~~~~~~ 1062 (1085)
.+++|||||||||+|+....+.+.+.+++++++|.+||+|||+++ ++++.|||+.||.+ |+.+...+ .++ ...+++
T Consensus 162 ~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~~~~~~~~~~~~~lv 239 (500)
T COG1129 162 FDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVGTRPTAAETSEDELV 239 (500)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEeeecccccCCCHHHHH
Confidence 999999999999999999999999999999999999999999997 79999999999986 68888888 354 344566
Q ss_pred HHHH
Q 001400 1063 KYFE 1066 (1085)
Q Consensus 1063 ~~~~ 1066 (1085)
+..-
T Consensus 240 ~~Mv 243 (500)
T COG1129 240 RLMV 243 (500)
T ss_pred HHhh
Confidence 5543
No 314
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=327.03 Aligned_cols=202 Identities=24% Similarity=0.338 Sum_probs=168.8
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCC-CCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPG 916 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~-~~~~ 916 (1085)
++.+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.+||++|++. .++.
T Consensus 21 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 21 ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 3568999999999999999999999999999999999876 468999999987643 235677999999974 5677
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
.|++||+.+..... ..........++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||
T Consensus 99 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~lllLDEP~ 170 (271)
T PRK13632 99 ATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSGGQKQRVAIASVLALNPEIIIFDEST 170 (271)
T ss_pred ccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998764321 1122333456788999999977666543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||+.++..+++.|+++.++ ++|||++||+++. + ..+|++++|++ |+++..|+..
T Consensus 171 ~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~~g~~~ 227 (271)
T PRK13632 171 SMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIAQGKPK 227 (271)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999998766 5999999999863 4 47999999985 6888888754
No 315
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-35 Score=318.56 Aligned_cols=200 Identities=27% Similarity=0.376 Sum_probs=169.0
Q ss_pred EeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHH
Q 001400 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLES 922 (1085)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gy~~Q~~~~~~~~tv~e~ 922 (1085)
+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|+++|.++... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999866 5689999999876431 234679999999988889999999
Q ss_pred HHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHH
Q 001400 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1085)
Q Consensus 923 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~ 1002 (1085)
+.+..... ........+.+.++++.+++.+..+..+ ..||+|||||++|||||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764322 1122333455678899999877666543 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 1003 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 1003 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+++.+.+.|+++..+ |+|||++||++. ++.+.+|++++|++ |++++.|+..
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 215 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKPE 215 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999998764 999999999986 46778999999985 7888888743
No 316
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.3e-35 Score=319.31 Aligned_cols=202 Identities=25% Similarity=0.315 Sum_probs=166.8
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC--CCCceEEEEc-cCCCCCC
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVS-QQDWQVA 222 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~ 222 (1085)
..+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 3457999999999999999999999999999999999998876 99999999865332 2245799997 5566778
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
.+||+|++.+.....+... .+....++.+++.+||++..|+.++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-- 152 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPVR-- 152 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCChh--
Confidence 8999999988643321100 0011236778889999988887654
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|+
T Consensus 153 ---~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 153 ---QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRER-GTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHHHhCCEEEEEe
Confidence 599999999999999999999999999999999999999999999987643 4456667888889999999999999
Q ss_pred CCeEEEec
Q 001400 383 EGQIVYQG 390 (1085)
Q Consensus 383 ~G~iv~~G 390 (1085)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 317
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=326.83 Aligned_cols=203 Identities=25% Similarity=0.355 Sum_probs=168.9
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC----CCceEEEEccCCC-CCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDW-QVAE 223 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~~ 223 (1085)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++. .+..
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 5999999999999999999999999999999999998876 999999999875432 2357999999975 4667
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||.||+.|.....+.. . .+....++++++.+||++..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl~~~~~~~~---- 134 (274)
T PRK13644 93 RTVEEDLAFGPENLCLP-P---------------------------------IEIRKRVDRALAEIGLEKYRHRSP---- 134 (274)
T ss_pred chHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHHHhcCCc----
Confidence 89999998864322110 0 001123778899999988777655
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++... +++|+.++|+..++ ..+|+|++|++
T Consensus 135 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~--g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 135 -KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEK--GKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhC--CCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998652 45566677888887 56999999999
Q ss_pred CeEEEecChhhHH
Q 001400 384 GQIVYQGPRVSVL 396 (1085)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1085)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999987764
No 318
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=338.14 Aligned_cols=195 Identities=25% Similarity=0.405 Sum_probs=169.4
Q ss_pred cceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-------CCCceEEEEccCCCCCCCCC
Q 001400 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1085)
|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++++|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999998876 99999999876431 12467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.|+.+.. ...+++++++.+||++..+..+ .
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998753100 0123678899999987777654 4
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+.+++..++|++++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999987643 4556668899999999999999999999
Q ss_pred EEEecChhhHH
Q 001400 386 IVYQGPRVSVL 396 (1085)
Q Consensus 386 iv~~G~~~~~~ 396 (1085)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999998874
No 319
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=325.82 Aligned_cols=205 Identities=26% Similarity=0.358 Sum_probs=168.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCC-CCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1085)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999998876 999999999875432 2467999999974 5778
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.+.....+... .+....++++++.+||++..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVPP----------------------------------KKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 999999987543211000 001224778899999987777655
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++. ++++|+.++|+.+++. .+|++++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998753 3345555667777774 7999999999
Q ss_pred CeEEEecChhhHH
Q 001400 384 GQIVYQGPRVSVL 396 (1085)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1085)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999887654
No 320
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=325.74 Aligned_cols=202 Identities=25% Similarity=0.336 Sum_probs=168.9
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~-~~~~~ 917 (1085)
..+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. .++..
T Consensus 22 ~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 22 SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 358999999999999999999999999999999999876 468999999987642 345677999999975 67788
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
|+.+|+.|..... ........+.++++++.+++.+..+.. +..||+|||||++|||||+.+|++|||||||+
T Consensus 100 ~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~lllLDEPt~ 171 (269)
T PRK13648 100 IVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSGGQKQRVAIAGVLALNPSVIILDEATS 171 (269)
T ss_pred cHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998764322 112233345678899999987766554 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|||+.++..+++.|+++.++ |.|||++||+++. +. .+|++++|++ |++++.|+..+
T Consensus 172 ~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~-~~-~~d~i~~l~~-G~i~~~g~~~~ 228 (269)
T PRK13648 172 MLDPDARQNLLDLVRKVKSEHNITIISITHDLSE-AM-EADHVIVMNK-GTVYKEGTPTE 228 (269)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH-Hh-cCCEEEEEEC-CEEEEecCHHH
Confidence 99999999999999998764 8999999999873 54 4999999985 78998887653
No 321
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-36 Score=290.54 Aligned_cols=214 Identities=22% Similarity=0.320 Sum_probs=180.9
Q ss_pred cccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCC-------------h
Q 001400 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR-------------Q 897 (1085)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~-------------~ 897 (1085)
+++++.+.++...+|++||++.+.|+.+.|+|.|||||||+|+||.=+.+ +..|.|.++|..++ .
T Consensus 8 ~v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~ 85 (256)
T COG4598 8 EVEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADK 85 (256)
T ss_pred ehhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCH
Confidence 44566677888999999999999999999999999999999999997666 56899999996531 0
Q ss_pred ---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001400 898 ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQR 974 (1085)
Q Consensus 898 ---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqr 974 (1085)
...+.+.|+|+|+.+++..+||.||+.-..-.- ...++.+..+..+..+..+|+.+.++.+. ..|||||+
T Consensus 86 ~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhV--Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQ 158 (256)
T COG4598 86 RQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHV--LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQ 158 (256)
T ss_pred HHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHh--hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHH
Confidence 124456899999999999999999997543211 13345566677788899999988877653 47999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 975 KRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 975 qrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
||++|||||+.+|+++++|||||+|||+-.-.+.+.+++++++|+|.+++||.+.+ ..+...++++|.+ |++...|+.
T Consensus 159 QR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P 236 (256)
T COG4598 159 QRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPP 236 (256)
T ss_pred HHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCCh
Confidence 99999999999999999999999999999999999999999999999999999864 5667789999985 799999987
Q ss_pred C
Q 001400 1055 G 1055 (1085)
Q Consensus 1055 ~ 1055 (1085)
.
T Consensus 237 ~ 237 (256)
T COG4598 237 E 237 (256)
T ss_pred H
Confidence 5
No 322
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-35 Score=322.48 Aligned_cols=209 Identities=22% Similarity=0.292 Sum_probs=166.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC--CC-eeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--GG-IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.++.. ...++.+||++|++
T Consensus 23 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 102 (259)
T PRK14274 23 GQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKG 102 (259)
T ss_pred CCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCC
Confidence 34579999999999999999999999999999999999754 11 147999999987632 23456799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++. |++||+.+....+.. ....+..+.++++++.+++.+....... ..+.+||+|||||++|||+|+.+|+|||
T Consensus 103 ~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~LS~Gq~qrv~laral~~~p~lll 178 (259)
T PRK14274 103 NPFPQ-SIFDNVAYGPRIHGT--KNKKKLQEIVEKSLKDVALWDEVKDRLH-TQALSLSGGQQQRLCIARALATNPDVLL 178 (259)
T ss_pred ccccc-CHHHHHHhHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88875 999999876432211 1122334456788888887532111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+++.|+++.+ ++|||++||+++ .+.+.+|++++|++ |+++..|+..
T Consensus 179 lDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 239 (259)
T PRK14274 179 MDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GELVECNDTN 239 (259)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999999999864 799999999986 47788999999974 7899888754
No 323
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=3.3e-35 Score=309.37 Aligned_cols=171 Identities=54% Similarity=0.908 Sum_probs=151.1
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCC--CCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK--TGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~--~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv 919 (1085)
..+|+|+||++++||+++|+|+||||||||+++|+|.. . +.+|+|.++|.+......++.++|++|++.+++.+|+
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t~ 99 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLTV 99 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCEeCchHhhhheEEEccCcccCCCCCcH
Confidence 56999999999999999999999999999999999986 5 5689999999987654556789999999988889999
Q ss_pred HHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Q 001400 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1085)
Q Consensus 920 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgL 999 (1085)
+||+.+.... . .||+|||||++|||||+.+|++|+|||||+||
T Consensus 100 ~~~i~~~~~~---------------~----------------------~LS~G~~qrv~laral~~~p~illlDEP~~~L 142 (194)
T cd03213 100 RETLMFAAKL---------------R----------------------GLSGGERKRVSIALELVSNPSLLFLDEPTSGL 142 (194)
T ss_pred HHHHHHHHHh---------------c----------------------cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCC
Confidence 9999754210 0 49999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 1000 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
|+.+++.+.+.|+++.++|+|||++||+++.++.+.+|++++|++ |++++.|
T Consensus 143 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 143 DSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 999999999999998777999999999986457778999999985 6777653
No 324
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=321.04 Aligned_cols=209 Identities=22% Similarity=0.253 Sum_probs=167.7
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
+++.+|+||||++++||++||+|+||||||||+++|+|...+ .+.+|+|.++|.++.. ...++.++|++|++
T Consensus 31 ~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 110 (267)
T PRK14237 31 GKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRP 110 (267)
T ss_pred CCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCC
Confidence 345799999999999999999999999999999999997642 1468999999987632 23466799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++ .|++||+.+...... ........+.++++++.+++.+..+..... .+..||+|||||++|||||+.+|++|+
T Consensus 111 ~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~~~LS~G~~qrl~laral~~~p~lll 186 (267)
T PRK14237 111 NPFA-KSIYENITFALERAG--VKDKKVLDEIVETSLKQAALWDQVKDDLHK-SALTLSGGQQQRLCIARAIAVKPDILL 186 (267)
T ss_pred cccc-ccHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCchhhhhhcC-CcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8877 599999987643211 112223345677888888885321111111 245899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 187 LDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 247 (267)
T PRK14237 187 MDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFYL-GDLIEYDKTR 247 (267)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999999999985 5799999999987 47788999999984 7899988764
No 325
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=318.83 Aligned_cols=210 Identities=24% Similarity=0.311 Sum_probs=166.2
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhC--CCCceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++ +..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 59999999999999999999999999999999999864 1112489999999887532 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+ .||+||+.|+....+.... + .....++.+++.+||.+...+.. +
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK-A--------------------------------YLAERVERSLRHAALWDEVKDRL-H 144 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 5999999886432211000 0 00123666788888854221222 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~tH~~~~~~~~~d~v~~l 221 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--R-YTIIIVTHNMQQAARVSDVTAFF 221 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CeEEEEEecHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999999843 3 45666888899999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 222 YMGKLIEVGPTEQIF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987663
No 326
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=322.21 Aligned_cols=205 Identities=22% Similarity=0.272 Sum_probs=169.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC----------------CCCceE
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF----------------VPPRTS 211 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~----------------~~~~~~ 211 (1085)
+++|+|+|+.|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 36999999999999999999999999999999999998775 89999999876421 113579
Q ss_pred EEEccCCCCCCCCCHHHHHHHhhh-hcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhC
Q 001400 212 AYVSQQDWQVAEMTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 290 (1085)
Q Consensus 212 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 290 (1085)
+|++|++.+++.+||+||+.++.. ..+.. . .....++.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~-------~---------------------------~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS-------K---------------------------QEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC-------H---------------------------HHHHHHHHHHHHHcC
Confidence 999999998999999999987532 11100 0 001224677899999
Q ss_pred Ccccc-cccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChh
Q 001400 291 LDTCA-DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 369 (1085)
Q Consensus 291 L~~~~-dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~ 369 (1085)
|.+.. +. ....|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. +.+|+.++|+..
T Consensus 141 l~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~--g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEE--GKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHH
Confidence 97653 43 34579999999999999999999999999999999999999999999998653 455666888899
Q ss_pred HHHhhcCeEEEecCCeEEEecChhhHH
Q 001400 370 EAYELFDDVILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 370 ~~~~~~D~ii~L~~G~iv~~G~~~~~~ 396 (1085)
++..+||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999987763
No 327
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.5e-35 Score=316.01 Aligned_cols=194 Identities=27% Similarity=0.397 Sum_probs=162.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1085)
..+|+|+|+.|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 35999999999999999999999999999999999998776 999999999876432 235799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||+||+.++....+... ...+..++++++.+||++..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP-- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 89999999988643221000 001123678899999987666554
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +++|+.++|+.+++.+++|++++|
T Consensus 136 ---~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 136 ---EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKR--GTTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred ---hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhcCEEEEe
Confidence 469999999999999999999999999999999999999999999998653 445666788889999999999999
Q ss_pred cCCe
Q 001400 382 SEGQ 385 (1085)
Q Consensus 382 ~~G~ 385 (1085)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 328
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-35 Score=315.40 Aligned_cols=211 Identities=23% Similarity=0.368 Sum_probs=172.9
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC---CCeeeeEEEEcCccCC---hh----cccceEEEEccC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISGYPKR---QE----TFARISGYCEQN 910 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~---~~~~~G~i~i~g~~~~---~~----~~~~~~gy~~Q~ 910 (1085)
..++++||||++++||++||+|.|||||||+.+.|.|..+ ....+|+|.++|.++- .+ -+.+.++|++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4689999999999999999999999999999999999764 2356789999998642 22 134579999999
Q ss_pred CC--CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 001400 911 DI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1085)
Q Consensus 911 ~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ 988 (1085)
+. +.|-+||.+.+.-......... ..++..+.+.++++.+++.+-.......| .+|||||||||.||.||+.+|+
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~YP--helSGGMrQRV~IAmala~~P~ 173 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKSYP--HELSGGMRQRVMIAMALALNPK 173 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhhCC--cccCCcHHHHHHHHHHHhCCCC
Confidence 75 5688899887764433221110 23445667888999999876543333333 5899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 989 IVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 989 illlDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
+||.||||++||...+++|+++|+++.+ .|.|+|+||||+.. +.+.||||.||. .|++++.|+..+
T Consensus 174 LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VMY-aG~iVE~g~~~~ 240 (316)
T COG0444 174 LLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVMY-AGRIVEEGPVEE 240 (316)
T ss_pred EEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEEE-CcEEEEeCCHHH
Confidence 9999999999999999999999999986 69999999999975 889999999998 589999998754
No 329
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-35 Score=330.51 Aligned_cols=211 Identities=21% Similarity=0.286 Sum_probs=171.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
..+|+|+|+.|++|++++|+|||||||||||++|+|...+. .+.+|+|.++|.++... ..++.++||+|++++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35999999999999999999999999999999999987531 13489999999988532 235679999999997
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
+. .||+|||.|+....+... .+ ..+..++.+++.++|.+..++.++
T Consensus 175 ~~-~ti~eNi~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 FE-MSIFDNVAYGPRNNGIND-RK--------------------------------ILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred CC-CcHHHHHHhHHHhcCCCh-HH--------------------------------HHHHHHHHHHHHcCCcchhhhhhh
Confidence 75 799999998643221100 00 001125566777777655556665
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
. ...+|||||||||+|||||+.+|+||+|||||+|||+.+...+.+.|+++.+ + .++++++|....+.+++|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEE
Confidence 3 5668999999999999999999999999999999999999999999998864 3 5666788999999999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|+++..|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998874
No 330
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-35 Score=320.87 Aligned_cols=209 Identities=21% Similarity=0.291 Sum_probs=166.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC--C-eeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|.++.. ..+++.++|++|++
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 95 (251)
T PRK14244 16 GSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKP 95 (251)
T ss_pred CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCc
Confidence 345799999999999999999999999999999999997531 1 358999999987532 13466799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++. |++||+.+....+.. .......++.++++++.+++.+........ .+.+||+|||||++|||||+.+|+|||
T Consensus 96 ~~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~Gq~qrv~laral~~~p~lll 172 (251)
T PRK14244 96 NPFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFELSGGQQQRLCIARAIAVKPTMLL 172 (251)
T ss_pred ccccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88875 999999876432211 111223345577889999886421111111 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 173 lDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 173 MDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999985 5899999999986 46778999999985 688888764
No 331
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.1e-35 Score=316.68 Aligned_cols=195 Identities=27% Similarity=0.379 Sum_probs=163.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1085)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 36999999999999999999999999999999999998776 999999998875432 235799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||+||+.+.....+.. .+ .....++++++.+||++..++.+
T Consensus 91 ~~~t~~~~l~~~~~~~~~~--~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-- 134 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP--PR--------------------------------EIRKRVPAALELVGLSHKHRALP-- 134 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC--HH--------------------------------HHHHHHHHHHHHcCCHHHhhCCh--
Confidence 9999999998864332110 00 01123677899999987776654
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
.+||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +++++.++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 135 ---AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKA--GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ---hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 455666888889999999999999
Q ss_pred cCCeE
Q 001400 382 SEGQI 386 (1085)
Q Consensus 382 ~~G~i 386 (1085)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 332
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-35 Score=320.36 Aligned_cols=208 Identities=23% Similarity=0.277 Sum_probs=166.7
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.++.. ...++.+||++|++
T Consensus 15 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 94 (251)
T PRK14270 15 GEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKP 94 (251)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCC
Confidence 4457999999999999999999999999999999999975421 257999999987632 23456799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
.+++ .|++||+.|....... .........++++++.+++.+. .+.. . ..+..||+|||||++|||||+.+|+||
T Consensus 95 ~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-~-~~~~~LS~G~~qrv~laral~~~p~ll 169 (251)
T PRK14270 95 NPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDL-K-KSALKLSGGQQQRLCIARTIAVKPDVI 169 (251)
T ss_pred CcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHh-h-CCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 8887 8999999876433211 1122334456788888887421 1111 1 123579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 170 llDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 231 (251)
T PRK14270 170 LMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFLM-GDLIEFNKTE 231 (251)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEEC-CeEEEeCCHH
Confidence 99999999999999999999999865 689999999986 47788999999985 7888888754
No 333
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=320.26 Aligned_cols=206 Identities=19% Similarity=0.332 Sum_probs=170.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|+++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999998776 9999999988754322 3579999999988888
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.+..+...... . ......++++++.+||++..+..
T Consensus 93 ~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 134 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLS---------A------------------------EQREDRANELMEEFHIEHLRDSM----- 134 (241)
T ss_pred CcHHHHHhhhhhcccccC---------H------------------------HHHHHHHHHHHHHcCCHHHhhcc-----
Confidence 999999987533211000 0 00122467789999998765554
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
.+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.++.++. . +.+++.++|+..++.+++|++++|++
T Consensus 135 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 135 GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 456999999999999999999999999999999999999999999998864 2 44566677888899999999999999
Q ss_pred CeEEEecChhhHH
Q 001400 384 GQIVYQGPRVSVL 396 (1085)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1085)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999987763
No 334
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-35 Score=319.70 Aligned_cols=206 Identities=23% Similarity=0.303 Sum_probs=166.3
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
.+|+|+|++|++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 5899999999999999999999999999999999998752 12489999999876421 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc----ccccc
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 297 (1085)
+ +||+||+.|+....+.... ......++.+++.+|+. +..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 4 8999999886432211000 00112356677777773 33454
Q ss_pred cccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCe
Q 001400 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1085)
Q Consensus 298 ~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1085)
. ++.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ + ++++.++|+.+++.+++|+
T Consensus 147 ~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 N-----ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--S-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCE
Confidence 3 457999999999999999999999999999999999999999999999853 3 5566688888999999999
Q ss_pred EEEecCCeEEEecChhhHH
Q 001400 378 VILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 378 ii~L~~G~iv~~G~~~~~~ 396 (1085)
+++|++|+++..|+.+++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 335
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.4e-35 Score=368.83 Aligned_cols=205 Identities=27% Similarity=0.369 Sum_probs=165.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1085)
.++|+|+|++|+|||.++|+||||||||||+|+|+|.++|. +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 46999999999999999999999999999999999999886 9999999999887653 578999999998776 5
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
|++|||.++.. ...+.+.++++ ..+ .++.+ -.|++..||.+|+. .
T Consensus 542 TI~eNi~~~~~-----~~~e~i~~al~---~a~------------------------l~~~i--~~lp~G~dt~ige~-G 586 (686)
T TIGR03797 542 SIFENIAGGAP-----LTLDEAWEAAR---MAG------------------------LAEDI--RAMPMGMHTVISEG-G 586 (686)
T ss_pred cHHHHHhcCCC-----CCHHHHHHHHH---HcC------------------------cHHHH--HhccccccccccCC-C
Confidence 99999987522 01111111110 000 11111 23677889999975 4
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
.+||||||||++||||++++|++|+||||||+||+.++.+|.+.|+++ ++|+|+ ++|.. +....+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCEEEEEECC
Confidence 689999999999999999999999999999999999999999999875 345554 55655 455779999999999
Q ss_pred eEEEecChhhHHH
Q 001400 385 QIVYQGPRVSVLD 397 (1085)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1085)
+++++|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998864
No 336
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.1e-35 Score=353.35 Aligned_cols=219 Identities=26% Similarity=0.348 Sum_probs=178.7
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCCCC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIH 913 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~~~ 913 (1085)
.+++..+|+|+||+|.+||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+
T Consensus 13 ~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 90 (501)
T PRK10762 13 AFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVTFNGPKSSQEAGIGIIHQELNL 90 (501)
T ss_pred EeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHhCCEEEEEcchhc
Confidence 3455679999999999999999999999999999999999876 468999999987532 1134579999999988
Q ss_pred CCCCCHHHHHHHhhhhcCC-CcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 914 SPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
++.+||+||+.|+...+.. ........++.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|||
T Consensus 91 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllL 165 (501)
T PRK10762 91 IPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSIGEQQMVEIAKVLSFESKVIIM 165 (501)
T ss_pred cCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8999999999886432110 11122333456788999999987766543 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc-hHHHHHHH
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK-SCELIKYF 1065 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~-~~~~~~~~ 1065 (1085)
||||+|||+.++..+++.|+++.+.|.|||++|||++ ++...||++++|++ |+++..|+..+. ...+.+++
T Consensus 166 DEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~~~~~~~~~~~ 237 (501)
T PRK10762 166 DEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAEREVADLTEDSLIEMM 237 (501)
T ss_pred eCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEecCcCcCCHHHHHHHh
Confidence 9999999999999999999999877999999999986 47788999999985 789988887653 23344443
No 337
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4e-35 Score=317.91 Aligned_cols=202 Identities=26% Similarity=0.316 Sum_probs=167.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 36999999999999999999999999999999999999876 9999999988754322 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhC-CcccccccccCc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-LDTCADTLVGDE 302 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 302 (1085)
+||+||+.++....+.. .....+.+++.++ +.+..++.
T Consensus 90 ~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~~---- 128 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPVLKEMLGRR---- 128 (230)
T ss_pred CcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHhHHHHhhCC----
Confidence 99999998764321100 0011345566665 45444544
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
++.||||||||++||+||+.+|++++|||||+|||+.++.++.+.|+++++.. +++++.++|+.+++..++|+|++|+
T Consensus 129 -~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 129 -GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEG-GMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcC-CcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 45699999999999999999999999999999999999999999999987532 4556668888999999999999999
Q ss_pred CCeEEEecChhhH
Q 001400 383 EGQIVYQGPRVSV 395 (1085)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1085)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998765
No 338
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=329.02 Aligned_cols=205 Identities=24% Similarity=0.321 Sum_probs=169.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-------CCceEEEEccCCC-
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDW- 219 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~d~- 219 (1085)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999876 999999998875321 1357999999962
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-cccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1085)
.+..+||+||+.|+....+... .+...+++++++.+||+ ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFSE----------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 3446899999988643221100 00122477889999996 455555
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.++||++
T Consensus 143 ~-----~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 P-----FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999999864 2566667889999999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 001400 379 ILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~ 396 (1085)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 339
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-35 Score=320.12 Aligned_cols=208 Identities=24% Similarity=0.316 Sum_probs=165.0
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|.... .+.+|+|.++|.++.. ...++.++|++|++
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 93 (250)
T PRK14240 14 GDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQP 93 (250)
T ss_pred CCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCC
Confidence 345699999999999999999999999999999999996431 1257999999987642 23466799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++ .|++||+.+....+.. .......+.++++++.+++.+........ .+..||+|||||++|||||+.+|++|+
T Consensus 94 ~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~~LS~G~~qrv~laral~~~p~lll 169 (250)
T PRK14240 94 NPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKK-SALGLSGGQQQRLCIARALAVEPEVLL 169 (250)
T ss_pred ccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhc-CCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8877 8999999886433211 11223345677888888764211111111 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|||||+|||+.++..+.+.|+++. ++.|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 170 lDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (250)
T PRK14240 170 MDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFLN-GEIVEFGDT 229 (250)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999985 4899999999986 47788999999985 688888764
No 340
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-35 Score=330.28 Aligned_cols=217 Identities=16% Similarity=0.199 Sum_probs=172.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC-CceeeEEEECCccCCCCCC-------CceEEEEccCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1085)
..+|+|||++|++||+++|+|+||||||||+++|+|++++. ...+|+|.++|.++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 56999999999999999999999999999999999998642 2358999999998765432 246999999975
Q ss_pred --CCCCCCHHHHHHHhhhhcCC-CCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccc
Q 001400 220 --QVAEMTVRETLDFAGQCQGV-GSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCAD 296 (1085)
Q Consensus 220 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 296 (1085)
+.+.+||.+++.+....... +..+ ... .+....+.++|+.+||.+..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~~~-------------~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------QRF-------------GWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------ccH-------------HHHHHHHHHHHHHCCCCChHH
Confidence 57889999999764221100 0000 000 001234778999999975321
Q ss_pred ccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcC
Q 001400 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1085)
Q Consensus 297 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1085)
. -+..+..|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+.. +++++.++|+...+.+++|
T Consensus 151 ~--~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 A--MRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNN-NTTILLISHDLQMLSQWAD 227 (330)
T ss_pred H--HhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCC
Confidence 1 123456799999999999999999999999999999999999999999999987643 4567778999999999999
Q ss_pred eEEEecCCeEEEecChhhHH
Q 001400 377 DVILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 377 ~ii~L~~G~iv~~G~~~~~~ 396 (1085)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999988764
No 341
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-35 Score=319.75 Aligned_cols=211 Identities=25% Similarity=0.302 Sum_probs=165.6
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCe---eeeEEEEcCccCCh-----hcccceEEEEccC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGI---IEGDIYISGYPKRQ-----ETFARISGYCEQN 910 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~---~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~ 910 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|..++.+ .+|+|.++|.++.. ..+++.++|++|+
T Consensus 14 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 93 (252)
T PRK14272 14 YGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQK 93 (252)
T ss_pred ECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEecc
Confidence 345679999999999999999999999999999999999764322 37999999987532 2345679999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 911 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
+.+++..|+.||+.+....... ...+...+.++++++.+++......... ..+..||+|||||++|||||+.+|+||
T Consensus 94 ~~~~~~~t~~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~ll 170 (252)
T PRK14272 94 PNPFPTMSVFDNVVAGLKLAGI--RDRDHLMEVAERSLRGAALWDEVKDRLK-TPATGLSGGQQQRLCIARALAVEPEIL 170 (252)
T ss_pred CccCcCCCHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCcchhhhhhhc-CCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9989889999999875432211 1122223445666666665321111111 123579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|||||+|||+.++..+.+.|++++ ++.|||++||+++ .+.+.+|++++|++ |++++.|+..
T Consensus 171 llDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 232 (252)
T PRK14272 171 LMDEPTSALDPASTARIEDLMTDLK-KVTTIIIVTHNMH-QAARVSDTTSFFLV-GDLVEHGPTD 232 (252)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999999986 4799999999986 47778999999985 6888888754
No 342
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=5.2e-35 Score=316.75 Aligned_cols=201 Identities=25% Similarity=0.311 Sum_probs=164.4
Q ss_pred EeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC--CeeeeEEEEcCccCChhcc-cceEEEEccCCC--CCCCCC
Q 001400 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQETF-ARISGYCEQNDI--HSPGLT 918 (1085)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~--~~~~G~i~i~g~~~~~~~~-~~~~gy~~Q~~~--~~~~~t 918 (1085)
+|+|+||+|++|++++|+|+||||||||+++|+|..++ .+.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 46899999999999999999999999999999998652 0168999999987654332 357999999974 556789
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc---ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS---LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
+.|++.+....... ......+.++++++.+++.+ ..+.. +..||+|||||++|||||+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999765432211 11233456788999999873 33332 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999986 47778999999985 788888864
No 343
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=320.22 Aligned_cols=208 Identities=25% Similarity=0.310 Sum_probs=164.8
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC--C-CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|.++.. ..+++.++|++|++
T Consensus 16 ~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 95 (252)
T PRK14239 16 NKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQP 95 (252)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCC
Confidence 34579999999999999999999999999999999999632 1 1247999999987632 23456799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
.+++ .|++||+.+....+.. .......+.++++++.+++.+. .+.... .+..||+|||||++|||||+.+|+||
T Consensus 96 ~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~~~LS~G~~qrv~laral~~~p~ll 170 (252)
T PRK14239 96 NPFP-MSIYENVVYGLRLKGI--KDKQVLDEAVEKSLKGASIWDEVKDRLHD--SALGLSGGQQQRVCIARVLATSPKII 170 (252)
T ss_pred ccCc-CcHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCchhHHHHHhc--CcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 8876 7999999876432211 1122234556778888887431 111111 23579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 171 llDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 232 (252)
T PRK14239 171 LLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD-GDLIEYNDTK 232 (252)
T ss_pred EEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999999864 699999999986 47788999999985 6888888754
No 344
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=321.58 Aligned_cols=204 Identities=25% Similarity=0.326 Sum_probs=168.3
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCC-CCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1085)
.+|+|+|++|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 5899999999999999999999999999999999998876 999999998875432 2457999999975 67888
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
|+++|+.|.....+.. .+ .....++.+++.+||.+..++.+
T Consensus 100 ~v~~~~~~~~~~~~~~--~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVP--YD--------------------------------EMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCC--HH--------------------------------HHHHHHHHHHHHcCCchhhhCCc-----
Confidence 9999998864322110 00 00123677899999987766554
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEH-NITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCchHHhc-CCEEEEEECC
Confidence 5699999999999999999999999999999999999999999999986533 3455557777777775 9999999999
Q ss_pred eEEEecChhhHH
Q 001400 385 QIVYQGPRVSVL 396 (1085)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1085)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 345
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.1e-34 Score=314.13 Aligned_cols=198 Identities=25% Similarity=0.359 Sum_probs=162.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1085)
..+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35999999999999999999999999999999999998876 9999999998765322 2469999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++.+||.||+.+.....+.. . ......++++++.+||.+..+..+
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~---~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 144 (228)
T PRK10584 100 IPTLNALENVELPALLRGES---S-------------------------------RQSRNGAKALLEQLGLGKRLDHLP- 144 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCC---H-------------------------------HHHHHHHHHHHHHcCCHhHhhCCh-
Confidence 89999999998754322100 0 001224778899999987766654
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++ +.+|++++
T Consensus 145 ----~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~-~~~d~i~~ 218 (228)
T PRK10584 145 ----AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHG-TTLILVTHDLQLA-ARCDRRLR 218 (228)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHH-HhCCEEEE
Confidence 46999999999999999999999999999999999999999999999865434 4555577777776 55999999
Q ss_pred ecCCeEEEe
Q 001400 381 LSEGQIVYQ 389 (1085)
Q Consensus 381 L~~G~iv~~ 389 (1085)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 346
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=321.13 Aligned_cols=225 Identities=22% Similarity=0.285 Sum_probs=175.3
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh----hcccceEEEEccCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ----ETFARISGYCEQNDI 912 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~~ 912 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|.++.. ...++.++|++|++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~ 111 (276)
T PRK14271 32 AGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPN 111 (276)
T ss_pred CCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCc
Confidence 456799999999999999999999999999999999997542 1468999999987532 234667999999988
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+++ .|++||+.+...... .....+....+.++++.+++......... ..+..||+|||||++|||||+.+|+||||
T Consensus 112 l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~LSgGq~qrl~LAral~~~p~lllL 187 (276)
T PRK14271 112 PFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFRLSGGQQQLLCLARTLAVNPEVLLL 187 (276)
T ss_pred cCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 887 799999987542211 11222333456778888888643211111 12457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc-----hHHHHHHHHh
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK-----SCELIKYFEV 1067 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~-----~~~~~~~~~~ 1067 (1085)
||||+|||+.+++.+.+.|+++.+ +.|||++||+++ ++.+.+|++++|++ |+++..|+..+. ......|+++
T Consensus 188 DEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i~~~g~~~~~~~~~~~~~~~~~~~~ 264 (276)
T PRK14271 188 DEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRLVEEGPTEQLFSSPKHAETARYVAG 264 (276)
T ss_pred cCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHHHHHhCcCcHHHHHHHhh
Confidence 999999999999999999999865 589999999986 47788999999985 789988875431 1234566676
Q ss_pred cccc
Q 001400 1068 ESFM 1071 (1085)
Q Consensus 1068 ~~g~ 1071 (1085)
.+|-
T Consensus 265 ~~~~ 268 (276)
T PRK14271 265 LSGD 268 (276)
T ss_pred cCCc
Confidence 6553
No 347
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-35 Score=324.40 Aligned_cols=205 Identities=24% Similarity=0.361 Sum_probs=171.2
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCC-CCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1085)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... ..+.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4999999999999999999999999999999999998876 999999998775422 2356899999963 34568
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||.||+.+.....+... ......++++++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 99999987543211100 001224778899999988777655
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|+|++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETY-GMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999987643 456666888899999999999999999
Q ss_pred eEEEecChhhHH
Q 001400 385 QIVYQGPRVSVL 396 (1085)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1085)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999988774
No 348
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-35 Score=320.27 Aligned_cols=209 Identities=22% Similarity=0.246 Sum_probs=169.4
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQN 910 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~ 910 (1085)
+++..+|+|+||++++||++||+|+||||||||+++|+|...+ .+.+|+|.++|.++.. ..+++.++|++|+
T Consensus 18 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 97 (261)
T PRK14263 18 YGNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQ 97 (261)
T ss_pred eCCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecC
Confidence 4567899999999999999999999999999999999997642 1258999999987532 2345679999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 911 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
+.++ .+|+.||+.+....+.. .....+.++++++.+++.+....... ..+..||+|||||++|||||+.+|++|
T Consensus 98 ~~~~-~~tv~enl~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv~laral~~~p~ll 171 (261)
T PRK14263 98 PNPF-SMSIFDNVAFGLRLNRY----KGDLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRLCIARAIATEPEVL 171 (261)
T ss_pred Cccc-cccHHHHHHHHHhhcCc----hHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 8877 58999999887543211 12233567888898888542221111 124579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEe-------cCcEEEEecCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-------RGGELIYAGPLG 1055 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~-------~gG~~~~~g~~~ 1055 (1085)
||||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.+|++++|+ ++|+++..|+..
T Consensus 172 llDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~~ 241 (261)
T PRK14263 172 LLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPTA 241 (261)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCHH
Confidence 9999999999999999999999985 4799999999986 4778899999996 468999998754
No 349
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=7.1e-35 Score=313.59 Aligned_cols=195 Identities=28% Similarity=0.418 Sum_probs=165.0
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~~~~ 915 (1085)
..+|+|+||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLLG 95 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhcC
Confidence 679999999999999999999999999999999999866 568999999987532 134678999999998888
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
..|+.||+.+...... .....+....++++++.+++.+..+... ..||+|||||++|||+|+.+|++|+||||
T Consensus 96 ~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrv~laral~~~p~illlDEP 168 (220)
T TIGR02982 96 FLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLSGGQKQRVAIARALVHRPKLVLADEP 168 (220)
T ss_pred CCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 8999999987643221 1223334456789999999976665543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEE
Q 001400 996 TSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 1048 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~ 1048 (1085)
|+|||+.++..+.+.|+++.+ .|+|||++||+++ ..+.+|++++|++ |++
T Consensus 169 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 169 TAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 999999999999999999876 4899999999975 4578999999985 453
No 350
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-35 Score=318.79 Aligned_cols=203 Identities=26% Similarity=0.307 Sum_probs=168.1
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCC------C---CCCceEEEEccCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE------F---VPPRTSAYVSQQDW 219 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~------~---~~~~~~~yv~Q~d~ 219 (1085)
.+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5999999999999999999999999999999999998776 9999999987521 0 12357999999998
Q ss_pred CCCCCCHHHHHHHhh-hhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccc
Q 001400 220 QVAEMTVRETLDFAG-QCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1085)
+++.+||.||+.+.. ...+... .+....++++++.+||+...++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLSK----------------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 899999999997531 1111000 00112367888999998766655
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
+ +.|||||||||+||||++.+|++++|||||+|||+.++..+.+.|+++.+ . +++++.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEE
Confidence 4 46999999999999999999999999999999999999999999998864 2 455666888889999999999
Q ss_pred EEecCCeEEEecChhhH
Q 001400 379 ILLSEGQIVYQGPRVSV 395 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~ 395 (1085)
++|.+|++++.|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999987654
No 351
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-35 Score=320.81 Aligned_cols=210 Identities=22% Similarity=0.274 Sum_probs=167.5
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC-e--eeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-I--IEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~--~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..++. + .+|+|.++|.++.. ...++.++|++|++
T Consensus 18 ~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 97 (259)
T PRK14260 18 NTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRP 97 (259)
T ss_pred CCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEeccc
Confidence 3457999999999999999999999999999999999975421 2 47999999987532 23456799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++ .|++||+.+....+.. .......+.++++++.+++.+....... ..+..||+|||||++|||||+.+|++|+
T Consensus 98 ~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~lll 173 (259)
T PRK14260 98 NPFP-MSIYENVAYGVRISAK--LPQADLDEIVESALKGAALWQEVKDKLN-KSALGLSGGQQQRLCIARALAIKPKVLL 173 (259)
T ss_pred ccCC-ccHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHcCCcchhhhHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8887 8999999876433211 1222334456788888887421111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEec----CcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR----GGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~----gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+. .|++++.|+..
T Consensus 174 LDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~~~~~~~G~i~~~~~~~ 239 (259)
T PRK14260 174 MDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFSTDESRIGQMVEFGVTT 239 (259)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEeccCCCCceEEEeCCHH
Confidence 9999999999999999999999864 699999999987 57788999999974 48999998754
No 352
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-35 Score=318.99 Aligned_cols=209 Identities=23% Similarity=0.291 Sum_probs=165.4
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|.+|+++||+|+||||||||+++|+|..++. +..|+|.++|.++.. ..+++.++|++|++
T Consensus 15 ~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 94 (251)
T PRK14249 15 HKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQP 94 (251)
T ss_pred CCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCC
Confidence 4457999999999999999999999999999999999976521 236999999987532 23467799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++. |++||+.+....+... ..+...+.++++++.+++.+....... ..+..||+|||||++|||||+.+|++||
T Consensus 95 ~~~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~Gq~qrv~laral~~~p~lll 170 (251)
T PRK14249 95 NPFPK-SIFDNVAFGPRMLGTT--AQSRLDEVVEKSLRQAALWDEVKDNLH-KSGLALSGGQQQRLCIARVLAIEPEVIL 170 (251)
T ss_pred ccCcC-cHHHHHhhHHHhcCCC--hhhHHHHHHHHHHHHhCCchhhhhHhh-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88875 9999998865432111 112223446677787776532111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++. ++.|||++||+++ .+.+.+|++++|++ |++++.|+..
T Consensus 171 LDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 231 (251)
T PRK14249 171 MDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GDLVEYGRTG 231 (251)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-CeEEEeCCHH
Confidence 999999999999999999999984 6899999999986 47778999999985 6888888754
No 353
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=319.98 Aligned_cols=211 Identities=23% Similarity=0.253 Sum_probs=168.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||++++||++||+|+||||||||+++|+|...+. ...|+|.++|.++.. ...++.++|++|++
T Consensus 18 ~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 97 (261)
T PRK14258 18 DTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKP 97 (261)
T ss_pred CCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCC
Confidence 3446999999999999999999999999999999999976531 136999999987531 23466799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++ .|++||+.+....... ....+..+.+.++++.+++.+..+..... .+..||+|||||++|||+|+.+|++|+
T Consensus 98 ~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LSgGq~qrv~laral~~~p~vll 173 (261)
T PRK14258 98 NLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SALDLSGGQQQRLCIARALAVKPKVLL 173 (261)
T ss_pred ccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-CcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8887 8999999876432211 11223345678889998875422111111 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecC----cEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG----GELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~g----G~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++++ .|.|||++||+++ ++.+.||++++|++| |++++.|+..
T Consensus 174 LDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~~~~G~i~~~~~~~ 241 (261)
T PRK14258 174 MDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNENRIGQLVEFGLTK 241 (261)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCCCcCceEEEeCCHH
Confidence 9999999999999999999999865 4899999999986 577889999999863 7999988754
No 354
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-35 Score=318.95 Aligned_cols=209 Identities=24% Similarity=0.258 Sum_probs=165.8
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCC----hhcccceEEEEccCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR----QETFARISGYCEQNDI 912 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~----~~~~~~~~gy~~Q~~~ 912 (1085)
+++.+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.++. ....++.++|++|++.
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~ 93 (249)
T PRK14253 14 GENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPN 93 (249)
T ss_pred CCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCC
Confidence 4567999999999999999999999999999999999975521 35899999998753 1234567999999998
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+++ .|+.||+.+....... .......+.+.++++.+++.+........ .+.+||+|||||++|||||+.+|+||||
T Consensus 94 ~~~-~tv~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~LS~G~~qrv~laral~~~p~llll 169 (249)
T PRK14253 94 PFP-MSIYENVAYGLRAQGI--KDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFGLSGGQQQRLCIARTIAMEPDVILM 169 (249)
T ss_pred cCc-ccHHHHHHhHHHhcCC--CchHHHHHHHHHHHHHcCCchhhhHHhhc-CcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 887 7999999876432111 11222334567778888775321111111 2357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||+|||+.++..+++.|+++.+ +.|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 170 DEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 229 (249)
T PRK14253 170 DEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GELVEHDDTQ 229 (249)
T ss_pred eCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999999999865 689999999986 47788999999985 7899888753
No 355
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=316.63 Aligned_cols=200 Identities=25% Similarity=0.379 Sum_probs=166.8
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1085)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5999999999999999999999999999999999998876 999999998775432 2457999999988776 69
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-ccccccccCccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLVGDEML 304 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 304 (1085)
|+||+.+.....+ . ...+++.+++.+||+ +..++. .
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATRD-----V 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhCC-----c
Confidence 9999976432110 0 011356788889996 444443 4
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
..|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMN-LTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 56999999999999999999999999999999999999999999999875333 45666888999999999999999999
Q ss_pred eEEEecChhhHH
Q 001400 385 QIVYQGPRVSVL 396 (1085)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1085)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999887763
No 356
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=6.7e-35 Score=334.53 Aligned_cols=199 Identities=27% Similarity=0.457 Sum_probs=169.9
Q ss_pred cceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-------CCCceEEEEccCCCCCCCCC
Q 001400 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1085)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999998876 99999999887432 12467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.|+.+... . . ....+++++++.+||++..++.+ .
T Consensus 92 v~enl~~~~~~~~--~----------~------------------------~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------S------------------------ERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h----------h------------------------HHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999988643110 0 0 01224778899999988777654 4
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+.+++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999987643 4556668899999999999999999999
Q ss_pred EEEecChhhHH
Q 001400 386 IVYQGPRVSVL 396 (1085)
Q Consensus 386 iv~~G~~~~~~ 396 (1085)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988764
No 357
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=6.3e-35 Score=316.14 Aligned_cols=207 Identities=21% Similarity=0.276 Sum_probs=167.7
Q ss_pred ecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC-CceeeEEEECCccCCCCCC-CceEEEEccCCC--CCCCCC
Q 001400 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-PRTSAYVSQQDW--QVAEMT 225 (1085)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~lT 225 (1085)
+|+|+|+.|++|++++|+||||||||||+++|+|.++|. .+.+|+|.++|+++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 589999999999999999999999999999999998761 0139999999988754432 257999999974 556789
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcc---cccccccCc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT---CADTLVGDE 302 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vg~~ 302 (1085)
+.|++.+.....+... ......++++++.+||++ ..+.
T Consensus 81 ~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 121 (230)
T TIGR02770 81 MGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDPEEVLKK----- 121 (230)
T ss_pred HHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCchHHHHhC-----
Confidence 9999977543211000 001224778899999973 3343
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
.+..|||||||||+||+||+.+|++|+|||||+|||..+...+.+.|+++++.. +++|+.++|..+++..++|++++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLF-GTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 345799999999999999999999999999999999999999999999987532 4566668888899999999999999
Q ss_pred CCeEEEecChhhHH
Q 001400 383 EGQIVYQGPRVSVL 396 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1085)
+|+++..|+.+++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999987764
No 358
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=4.8e-35 Score=316.78 Aligned_cols=201 Identities=26% Similarity=0.307 Sum_probs=165.7
Q ss_pred cccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHH
Q 001400 151 LDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETL 230 (1085)
Q Consensus 151 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 230 (1085)
|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999998776 9999999988765322 248999999889999999999
Q ss_pred HHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchh
Q 001400 231 DFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGG 310 (1085)
Q Consensus 231 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 310 (1085)
.+........ .+ . ......++++++.+||++..++.+ ..||||
T Consensus 76 ~~~~~~~~~~--~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--LS------K------------------------SERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcccC--CC------H------------------------HHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 8753210000 00 0 001123677899999987777655 469999
Q ss_pred hhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEec
Q 001400 311 QKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 390 (1085)
Q Consensus 311 qkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G 390 (1085)
|||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +.+|+.++|+.+++.+++|+|++|++|++++.|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEH-RVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 9999999999999999999999999999999999999999987643 445666888889999999999999999999988
Q ss_pred Chhh
Q 001400 391 PRVS 394 (1085)
Q Consensus 391 ~~~~ 394 (1085)
+..+
T Consensus 198 ~~~~ 201 (230)
T TIGR01184 198 QILE 201 (230)
T ss_pred Ccee
Confidence 6543
No 359
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-35 Score=353.04 Aligned_cols=210 Identities=27% Similarity=0.316 Sum_probs=174.0
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh----cccceEEEEccCCCC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIH 913 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gy~~Q~~~~ 913 (1085)
.+++..+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++... ..++.+||++|++.+
T Consensus 14 ~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~ 91 (510)
T PRK09700 14 SFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINYNKLDHKLAAQLGIGIIYQELSV 91 (510)
T ss_pred EcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEECCCCCHHHHHHCCeEEEeecccc
Confidence 3455679999999999999999999999999999999999876 4689999999876421 123569999999988
Q ss_pred CCCCCHHHHHHHhhhhc----CCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 914 SPGLTVLESLLFSAWLR----LPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
++.+||+||+.++.... ........+..+.++++++.+++.+..+..+ .+||||||||++|||||+.+|+|
T Consensus 92 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~l 166 (510)
T PRK09700 92 IDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----ANLSISHKQMLEIAKTLMLDAKV 166 (510)
T ss_pred cCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCE
Confidence 89999999998753211 0000112233456788999999987666543 57999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|||||||+|||+.++..+++.|++++++|.|||++|||++ .+...||++++|++ |++++.|+..+
T Consensus 167 llLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~i~~~g~~~~ 231 (510)
T PRK09700 167 IIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GSSVCSGMVSD 231 (510)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEeeecchhh
Confidence 9999999999999999999999999878999999999986 46778999999985 78899887654
No 360
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=359.91 Aligned_cols=209 Identities=22% Similarity=0.361 Sum_probs=166.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1085)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 46999999999999999999999999999999999999886 9999999999876543 578999999998776 5
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
|++|||.++..- ....+.+.+++ +... .++.+ -.|++..||.+|+. .
T Consensus 432 Ti~~Ni~~~~~~---~~~~~~i~~al------------------~~~~---------l~~~i--~~lp~Gldt~ig~~-g 478 (582)
T PRK11176 432 TIANNIAYARTE---QYSREQIEEAA------------------RMAY---------AMDFI--NKMDNGLDTVIGEN-G 478 (582)
T ss_pred hHHHHHhcCCCC---CCCHHHHHHHH------------------HHhC---------cHHHH--HhcccccCceeCCC-C
Confidence 999999875210 00011111110 0000 11112 12677889999975 4
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
..||||||||++|||||+++|++|+||||||+||+.++..+.+.|+++.. ++|+|+ ++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~tvI~-VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRTSLV-IAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCEEEE-Eecch-HHHHhCCEEEEEECC
Confidence 67999999999999999999999999999999999999999999998743 445555 55655 566789999999999
Q ss_pred eEEEecChhhHHH
Q 001400 385 QIVYQGPRVSVLD 397 (1085)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1085)
+++..|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999988864
No 361
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=328.24 Aligned_cols=208 Identities=23% Similarity=0.287 Sum_probs=166.4
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~~ 913 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|.... .+.+|+|.++|.++.. ...++.++||+|++.+
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 4699999999999999999999999999999999997531 2458999999998742 2456789999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
++ .|++||+.|+...... ...+...+.++++++.+++.+-.+..++. .+.+||||||||++|||||+.+|+||+||
T Consensus 175 ~~-~ti~eNi~~~~~~~~~--~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~~~LSgGqkqRl~LARAl~~~p~IlLLD 250 (329)
T PRK14257 175 FE-MSIFDNVAYGPRNNGI--NDRKILEKIVEKSLKSAALWDEVKDDLDK-AGNALSGGQQQRLCIARAIALEPEVLLMD 250 (329)
T ss_pred CC-CcHHHHHHhHHHhcCC--ChHHHHHHHHHHHHHHcCCcchhhhhhhC-CcccCCHHHHHHHHHHHHHHhCCCEEEEe
Confidence 75 7999999986432111 11122234467788888874322222222 24579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|||+|||+.+...+.+.|+++.+ ++|||++||+++ .+.+.||++++|++ |+++..|+..+
T Consensus 251 EPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G~i~e~g~~~~ 310 (329)
T PRK14257 251 EPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-GWIEEAGETKT 310 (329)
T ss_pred CCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHHH
Confidence 99999999999999999999864 799999999986 36677999999985 79999987653
No 362
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-35 Score=322.22 Aligned_cols=205 Identities=21% Similarity=0.280 Sum_probs=164.3
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC--C-CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|.++.. ..+++.++|++|++
T Consensus 32 ~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 111 (268)
T PRK14248 32 GEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKP 111 (268)
T ss_pred CCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCC
Confidence 34579999999999999999999999999999999999632 1 1468999999987642 23456799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc----ccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
.+++. |++||+.+...... .......++.+.++++.+++.. ..+. .+..||+|||||++|||||+.+|
T Consensus 112 ~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LSgGq~qrl~laral~~~p 183 (268)
T PRK14248 112 NPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHS-----SALSLSGGQQQRLCIARTLAMKP 183 (268)
T ss_pred ccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhc-----CcccCCHHHHHHHHHHHHHhCCC
Confidence 88875 99999987532211 1111223345677888887742 2222 23579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
++|||||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 184 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 248 (268)
T PRK14248 184 AVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFLN-GDLVEYDQTE 248 (268)
T ss_pred CEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999999999854 789999999986 47788999999985 7899888753
No 363
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=4.8e-35 Score=310.20 Aligned_cols=187 Identities=27% Similarity=0.333 Sum_probs=159.9
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~ 916 (1085)
+++..+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.
T Consensus 10 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 87 (201)
T cd03231 10 RDGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTT 87 (201)
T ss_pred eCCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccccHHhhhheEEeccccccCCC
Confidence 345679999999999999999999999999999999999876 468999999987532 3456789999999988889
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
.|++||+.+.... . ..+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||
T Consensus 88 ~tv~e~l~~~~~~------~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt 153 (201)
T cd03231 88 LSVLENLRFWHAD------H---SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQRRVALARLLLSGRPLWILDEPT 153 (201)
T ss_pred cCHHHHHHhhccc------c---cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999874211 0 2345688899999987665543 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEE
Q 001400 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l 1042 (1085)
+|||+.++..+++.|+++.++|+|+|++||++. +....+++++++
T Consensus 154 ~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 154 TALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999998777999999999976 577788998776
No 364
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=323.38 Aligned_cols=208 Identities=26% Similarity=0.351 Sum_probs=169.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCC-CCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1085)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|....+|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999875222399999999875432 2357999999974 5778
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.|..+..+.. . .+...+++.+++.+||++..++.+
T Consensus 100 ~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~~~---- 141 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------R------------------------PEMIKIVRDVLADVGMLDYIDSEP---- 141 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------H------------------------HHHHHHHHHHHHHCCChhHhcCCc----
Confidence 99999998754322100 0 001224778899999987666554
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++ ..+|++++|++
T Consensus 142 -~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 142 -ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKN-NLTVISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 5799999999999999999999999999999999999999999999987543 44555577777777 57999999999
Q ss_pred CeEEEecChhhHH
Q 001400 384 GQIVYQGPRVSVL 396 (1085)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1085)
|++++.|+++++.
T Consensus 219 G~i~~~g~~~~~~ 231 (282)
T PRK13640 219 GKLLAQGSPVEIF 231 (282)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988774
No 365
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=318.42 Aligned_cols=208 Identities=27% Similarity=0.366 Sum_probs=165.7
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++.. ...++.++|++|++
T Consensus 14 ~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~ 93 (250)
T PRK14262 14 GEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKP 93 (250)
T ss_pred CCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCC
Confidence 345799999999999999999999999999999999997542 1258999999987532 23456799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++ .|++||+.+....... .......+.++++++.+++.+..+.... ..+.+||+|||||++|||||+.+|+||+
T Consensus 94 ~~~~-~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~Gq~qr~~la~al~~~p~lll 169 (250)
T PRK14262 94 TPFP-MSIYDNVAFGPRIHGV--KSKHKLDRIVEESLKKAALWDEVKSELN-KPGTRLSGGQQQRLCIARALAVEPEVIL 169 (250)
T ss_pred ccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCchhHHHHh-CChhhcCHHHHHHHHHHHHHhCCCCEEE
Confidence 8877 8999999876432211 1122334456788888887532111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|||||+|||+.++..+++.|+++.+ ++|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 170 lDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (250)
T PRK14262 170 LDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GELIEYGPT 229 (250)
T ss_pred EeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 9999999999999999999999864 799999999986 47788999999985 688888864
No 366
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-35 Score=318.98 Aligned_cols=203 Identities=26% Similarity=0.388 Sum_probs=166.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC----CCceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1085)
+.+|+|+|+.|++||+++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999998876 999999998876543 23569999999988998
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHh-CCcccccccccCc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-GLDTCADTLVGDE 302 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 302 (1085)
+||+||+.++..... . + + ....++.+++.+ ++.+..++.
T Consensus 95 ~tv~~~l~~~~~~~~---~-~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~---- 134 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D---Q-----------------------------FQERIKWVYELFPRLHERRIQR---- 134 (237)
T ss_pred CcHHHHHHHhhhccC---h-h---H-----------------------------HHHHHHHHHHHHHHHHHHHhCc----
Confidence 999999987532110 0 0 0 011244556666 465544443
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
...|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. + ++|+.++|+.+++.+++|++++|+
T Consensus 135 -~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~-~tiii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 135 -AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQ-G-MTIFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred -hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHC-C-CEEEEEeCcHHHHHhhCCEEEEEe
Confidence 3569999999999999999999999999999999999999999999998653 4 455557888899999999999999
Q ss_pred CCeEEEecChhhHH
Q 001400 383 EGQIVYQGPRVSVL 396 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1085)
+|++++.|+.+++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999987763
No 367
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=8e-35 Score=321.96 Aligned_cols=207 Identities=23% Similarity=0.318 Sum_probs=170.4
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCC--C
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 219 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d--~ 219 (1085)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 56999999999999999999999999999999999998876 999999998875432 235699999996 4
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-cccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1085)
+++.+||+||+.+....... .. + ......++++++.+||. ...+..
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~------------------~~--~-------------~~~~~~~~~~l~~~gl~~~~~~~~ 147 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTS------------------LD--E-------------SEQKARIAELLDMVGLRSEDADKL 147 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcC------------------CC--H-------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 56789999999765321100 00 0 00122467889999996 555554
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
+ +.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+...+.+++|++
T Consensus 148 ~-----~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~i 221 (265)
T TIGR02769 148 P-----RQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQRV 221 (265)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhcEE
Confidence 4 5699999999999999999999999999999999999999999999987543 455666889999999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 001400 379 ILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~ 396 (1085)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 222 AVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEeCCEEEEECCHHHHc
Confidence 999999999999988764
No 368
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8e-35 Score=318.10 Aligned_cols=211 Identities=24% Similarity=0.352 Sum_probs=171.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 36999999999999999999999999999999999998876 9999999987754321 3469999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.++..... ..+..... .. .......++++++.+||++..++.+
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~----------~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFF----------RL--------------SAEEKDRIEEVLETIGLADEADRLA---- 141 (242)
T ss_pred CCHHHHHHHhhhccc--cccccccc----------cc--------------HHHHHHHHHHHHHHcCCchhhcCCh----
Confidence 999999988543110 00000000 00 0001234788899999987766655
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
+.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+.+++.++||+|++|++
T Consensus 142 -~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 142 -GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999864 3 4566688889999999999999999
Q ss_pred CeEEEecChhhH
Q 001400 384 GQIVYQGPRVSV 395 (1085)
Q Consensus 384 G~iv~~G~~~~~ 395 (1085)
|++++.|+.+++
T Consensus 218 g~~~~~~~~~~~ 229 (242)
T TIGR03411 218 GSVLAEGSLDQV 229 (242)
T ss_pred CeEEeeCCHHHH
Confidence 999999987765
No 369
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.8e-35 Score=358.54 Aligned_cols=209 Identities=28% Similarity=0.391 Sum_probs=170.6
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 223 (1085)
++++|+|+|+.++|||.++|+||||||||||++.|+|.+++. +|+|.+||.++++.. .++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 346999999999999999999999999999999999999886 999999999988765 3588999999999887
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
.||+|||.++..- ...+.+.++++.. ...+.+ ..|++++||.||++
T Consensus 417 ~TI~~NI~~g~~~----at~eei~~a~k~a---------------------------~~~d~I--~~lp~g~dt~vge~- 462 (567)
T COG1132 417 GTIRENIALGRPD----ATDEEIEEALKLA---------------------------NAHEFI--ANLPDGYDTIVGER- 462 (567)
T ss_pred ccHHHHHhcCCCC----CCHHHHHHHHHHh---------------------------ChHHHH--HhCcccccceecCC-
Confidence 7999999986321 0111122211110 012222 23577899999954
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
...||||||||++||||++.+|+||+||||||+||+.+...|.+.++++.+ ++|+++ +.|..+.+.+ +|+|++|++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~ii-IaHRlsti~~-aD~IiVl~~ 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLI-IAHRLSTIKN-ADRIIVLDN 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEE-EeccHhHHHh-CCEEEEEEC
Confidence 457999999999999999999999999999999999999999999997753 457766 6676655555 999999999
Q ss_pred CeEEEecChhhHHH
Q 001400 384 GQIVYQGPRVSVLD 397 (1085)
Q Consensus 384 G~iv~~G~~~~~~~ 397 (1085)
|++++.|++++++.
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999875
No 370
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.3e-34 Score=319.38 Aligned_cols=205 Identities=26% Similarity=0.302 Sum_probs=165.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCcc-----CCh---hc----ccceEEEE
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP-----KRQ---ET----FARISGYC 907 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~-----~~~---~~----~~~~~gy~ 907 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+ +.. .. .++.++|+
T Consensus 17 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v 94 (258)
T PRK11701 17 GPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFV 94 (258)
T ss_pred CCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccccccccccCCHHHHHHHhhcceEEE
Confidence 34579999999999999999999999999999999999866 468999999986 432 11 24569999
Q ss_pred ccCCC--CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHh
Q 001400 908 EQNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELV 984 (1085)
Q Consensus 908 ~Q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~ 984 (1085)
+|++. +.+.+|+.||+.+....... .........+.++++.+++.+ ..+.. +..||+|||||++|||||+
T Consensus 95 ~q~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~Gq~qrl~laral~ 167 (258)
T PRK11701 95 HQHPRDGLRMQVSAGGNIGERLMAVGA--RHYGDIRATAGDWLERVEIDAARIDDL-----PTTFSGGMQQRLQIARNLV 167 (258)
T ss_pred eeCcccccCccccHHHHHHHHHHHhcc--CcHHHHHHHHHHHHHHcCCChhHHhCC-----CccCCHHHHHHHHHHHHHh
Confidence 99974 56778999998764321111 111223455778899998863 33432 3579999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 985 ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 985 ~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
.+|+||||||||+|||+.++..+++.|+++.++ |.|||++||+++ .+...+|++++|++ |++++.|+..
T Consensus 168 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 237 (258)
T PRK11701 168 THPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRLLVMKQ-GRVVESGLTD 237 (258)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999999999999999998764 899999999986 46668999999985 7899888753
No 371
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=320.43 Aligned_cols=206 Identities=29% Similarity=0.463 Sum_probs=170.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1085)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999998776 999999998765432 235689999998877889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||+||+.+.....+. .. ......++++++.+||++..++.+
T Consensus 92 tv~e~l~~~~~~~~~--~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 132 (258)
T PRK13548 92 TVEEVVAMGRAPHGL--SR--------------------------------AEDDALVAAALAQVDLAHLAGRDY----- 132 (258)
T ss_pred CHHHHHHhhhcccCC--Cc--------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----
Confidence 999999875321110 00 001123677899999987666655
Q ss_pred ccCchhhhhHHHHHHHHh------CCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 305 KGISGGQKKRLTTGELLV------GPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~------~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
..|||||||||+||+||+ .+|++|+|||||+|||+.++..+.+.|+++++.. +.+|+.++|+..++..++|+|
T Consensus 133 ~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 133 PQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred ccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEE
Confidence 469999999999999999 5999999999999999999999999999987333 445666788899999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 001400 379 ILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~ 396 (1085)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999887664
No 372
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=9.6e-35 Score=313.36 Aligned_cols=197 Identities=26% Similarity=0.367 Sum_probs=167.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1085)
.++|+|+|+.+++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999998876 999999998765322 35799999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccC
Q 001400 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1085)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1085)
||+.+.....+. .+..+..+++.+||++..|..+ ..|
T Consensus 89 ~~~~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL--------------------------------------PDSRIDEVLNIVDLTNTGKKKA-----KQF 125 (223)
T ss_pred HHHHHHHHHcCC--------------------------------------CHHHHHHHHHHcCCcHHHhhhH-----hhC
Confidence 999875432110 0113667888999987766554 469
Q ss_pred chhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEE
Q 001400 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1085)
Q Consensus 308 SGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv 387 (1085)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++. +.+|+.++|+..++.+++|++++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQ--GITVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999998652 445666778888999999999999999999
Q ss_pred EecChh
Q 001400 388 YQGPRV 393 (1085)
Q Consensus 388 ~~G~~~ 393 (1085)
+.|+..
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999764
No 373
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.3e-33 Score=353.19 Aligned_cols=208 Identities=28% Similarity=0.389 Sum_probs=173.2
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 895 (1085)
.+.++|++|.++. .+..+|+|+||+|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 5778888777631 23569999999999999999999999999999999999877 5689999999987
Q ss_pred C---hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------ccccCCCC
Q 001400 896 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1085)
Q Consensus 896 ~---~~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~ 965 (1085)
+ ...+++.+|||+|++.++++ |++||+.++. + .+ ++.++++++..++.+.. +..++..
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~- 585 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMSG-SIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG- 585 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCcc-cHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 5 35678899999999998865 9999998752 1 11 23467788888776533 2333333
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 966 ~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
+.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|++||+++ ..+.+|++++|++
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~- 659 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA- 659 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999886 689999999975 5678999999985
Q ss_pred cEEEEecCC
Q 001400 1046 GELIYAGPL 1054 (1085)
Q Consensus 1046 G~~~~~g~~ 1054 (1085)
|+++..|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 799999984
No 374
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=317.67 Aligned_cols=211 Identities=22% Similarity=0.275 Sum_probs=169.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35999999999999999999999999999999999998642 13599999999887532 124579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++ .||+||+.++....+... + ......+.++++.+||..+.+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD--K-------------------------------KVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC--H-------------------------------HHHHHHHHHHHHHcCCCchhhhhh-
Confidence 77 699999988643211100 0 001123667788888864322222
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+..++.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.++||++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--N-YTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhcCEEEE
Confidence 245568999999999999999999999999999999999999999999998853 3 5566678888899999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988763
No 375
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=6e-35 Score=314.73 Aligned_cols=196 Identities=22% Similarity=0.322 Sum_probs=164.1
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1085)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++++ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 36999999999999999999999999999999999998776 999999998875432 235799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||+||+.+.....+... .+....++.+++.+||.+..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP-- 135 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc--
Confidence 89999999988643321100 000123667888999987666544
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. +++++.++|+.+++..++|+|++|
T Consensus 136 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 136 ---IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV--GVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 456666889999999999999999
Q ss_pred cCCeEE
Q 001400 382 SEGQIV 387 (1085)
Q Consensus 382 ~~G~iv 387 (1085)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 376
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.7e-35 Score=311.72 Aligned_cols=190 Identities=24% Similarity=0.310 Sum_probs=162.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv 919 (1085)
++..+++++||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.....++.++|++|++.+++.+|+
T Consensus 22 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i~~~~~~~~i~~~~q~~~~~~~~t~ 99 (214)
T PRK13543 22 NEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTATRGDRSRFMAYLGHLPGLKADLST 99 (214)
T ss_pred CCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEccchhhhhceEEeecCcccccCCcH
Confidence 34569999999999999999999999999999999999876 4689999999876543345679999999988888999
Q ss_pred HHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Q 001400 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1085)
Q Consensus 920 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgL 999 (1085)
+||+.+....+. . ...+.++++++.+++.+..+... ..||+|||||++|||+++.+|++|+|||||+||
T Consensus 100 ~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~L 168 (214)
T PRK13543 100 LENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKKRLALARLWLSPAPLWLLDEPYANL 168 (214)
T ss_pred HHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999987643321 1 12234678888899876665543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEe
Q 001400 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1085)
Q Consensus 1000 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~ 1043 (1085)
|+.+++.+++.++++.++|.|||++||+++ ++.+.+|+++++.
T Consensus 169 D~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 169 DLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999998878999999999987 5788999999885
No 377
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=1.4e-34 Score=311.75 Aligned_cols=200 Identities=24% Similarity=0.336 Sum_probs=162.9
Q ss_pred ccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCC
Q 001400 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND 911 (1085)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~ 911 (1085)
+.+..+.++++.+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+..
T Consensus 25 ~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~ 93 (224)
T cd03220 25 ILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGG 93 (224)
T ss_pred hhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccc
Confidence 4455556777889999999999999999999999999999999999866 568999999976421 11123
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+.+.+||+||+.+....+. ......++.++++++.+++.+..+..+ .+||+|||||++|||+|+.+|++||
T Consensus 94 ~~~~~~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~lll 165 (224)
T cd03220 94 GFNPELTGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILL 165 (224)
T ss_pred cCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 34567899999987653321 122333456778889999877666543 5799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
|||||+|||+.++..+++.|+++.++|.|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 166 lDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 166 IDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999998777899999999986 46678999999985 6887654
No 378
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-35 Score=301.35 Aligned_cols=159 Identities=29% Similarity=0.447 Sum_probs=142.9
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~~ 917 (1085)
++..+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++..
T Consensus 11 ~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (173)
T cd03230 11 GKKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENL 88 (173)
T ss_pred CCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCC
Confidence 34569999999999999999999999999999999999866 468999999987543 24456799999999888888
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
|+.||+. ||+|||||++|||||+.+|++|+|||||+
T Consensus 89 tv~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~ 124 (173)
T cd03230 89 TVRENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTS 124 (173)
T ss_pred cHHHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999873 89999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
|||+.++..+.+.|+++.++|.|||++||+++ .+.+.+|++++|++|
T Consensus 125 ~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 125 GLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877899999999986 466789999999865
No 379
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=322.35 Aligned_cols=201 Identities=26% Similarity=0.314 Sum_probs=168.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~-~~~~~ 917 (1085)
..+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGA 97 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccC
Confidence 359999999999999999999999999999999999876 568999999987643 235678999999974 56778
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
||.||+.++.... ........+.++++++.+++.+..+.. +..||+|||||++|||||+.+|+||||||||+
T Consensus 98 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~lAraL~~~p~llllDEPt~ 169 (277)
T PRK13642 98 TVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSGGQKQRVAVAGIIALRPEIIILDESTS 169 (277)
T ss_pred CHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998764322 112233345678899999997766553 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+.++..+++.|++++++ |.|||++||+++. + ..+|++++|++ |+++..|+..
T Consensus 170 ~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~~g~~~ 225 (277)
T PRK13642 170 MLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIKEAAPS 225 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999765 9999999999863 4 46999999985 6888888754
No 380
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.8e-35 Score=309.89 Aligned_cols=190 Identities=23% Similarity=0.309 Sum_probs=158.1
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~ 916 (1085)
+++..+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.
T Consensus 11 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (204)
T PRK13538 11 RDERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTE 88 (204)
T ss_pred ECCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcccchHHhhhheEEeCCccccCcC
Confidence 345679999999999999999999999999999999999876 468999999987542 2345679999999988888
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
+|+.||+.+....+. . ...+.++++++.+++.+..+.. +..||+|||||++|||||+.+|++|+|||||
T Consensus 89 ~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt 157 (204)
T PRK13538 89 LTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQRRVALARLWLTRAPLWILDEPF 157 (204)
T ss_pred CcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 999999987643221 1 1234578899999997666554 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEE
Q 001400 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l 1042 (1085)
+|||+.++..+++.|+++.++|.|||++||+++ .+....+|++++
T Consensus 158 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 158 TAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 999999999999999998777899999999986 354444566554
No 381
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=315.20 Aligned_cols=212 Identities=19% Similarity=0.275 Sum_probs=169.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1085)
+.+|+|+|+++++|++++|+||||||||||+++|+|.+++..+.+|+|+++|+++.+.. .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 36999999999999999999999999999999999987532245999999999876432 2457999999988777 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||+||+.++....+.... . .....+++.+++.+||........ ++..
T Consensus 94 tv~eni~~~~~~~~~~~~-------------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKN-------------------K-------------DEEEALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCcccC-------------------h-------------HHHHHHHHHHHHHcCCChhhhHHh-cCCc
Confidence 999999886433211000 0 001123677888999853211111 2345
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++.++|+.+++.+++|++++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH--N-LSMIMVTHNMQQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEecCHHHHHhhCcEEEEEECC
Confidence 67999999999999999999999999999999999999999999998753 3 55666888999999999999999999
Q ss_pred eEEEecChhhHH
Q 001400 385 QIVYQGPRVSVL 396 (1085)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1085)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999987763
No 382
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-35 Score=311.08 Aligned_cols=195 Identities=24% Similarity=0.333 Sum_probs=163.5
Q ss_pred cceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-CCceEEEEccCCCCCCCCCHHHHHH
Q 001400 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRETLD 231 (1085)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1085)
|+|+.|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999998876 999999998875432 2357999999999899999999998
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhh
Q 001400 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1085)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1085)
++..... .. . ...+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~-~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KL--T-------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred ccccccc-Cc--c-------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7532110 00 0 001224778899999987777654 4699999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEec
Q 001400 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 390 (1085)
Q Consensus 312 kqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G 390 (1085)
|||++||+||+.+|++++|||||+|||..++..+.+.|+++++.. +.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAET-KMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999999999999987533 455666889999999999999999999998764
No 383
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1e-34 Score=318.98 Aligned_cols=206 Identities=23% Similarity=0.316 Sum_probs=171.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC----------------CCceE
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----------------PPRTS 211 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----------------~~~~~ 211 (1085)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 36999999999999999999999999999999999998876 999999998774321 24579
Q ss_pred EEEccCCCCCCCCCHHHHHHHhhhh-cCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhC
Q 001400 212 AYVSQQDWQVAEMTVRETLDFAGQC-QGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 290 (1085)
Q Consensus 212 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 290 (1085)
+|++|++.+++.+||.||+.++... .+.. .. .....++++++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA--------------------RA--------------EAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC--------------------HH--------------HHHHHHHHHHHHcC
Confidence 9999999889999999999875321 0000 00 00123677889999
Q ss_pred CcccccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhH
Q 001400 291 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 370 (1085)
Q Consensus 291 L~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 370 (1085)
|++..+..+ ..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+.++
T Consensus 136 l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHMP-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEH-DLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHH
Confidence 987666543 5699999999999999999999999999999999999999999999987643 4566668888899
Q ss_pred HHhhcCeEEEecCCeEEEecChhhHH
Q 001400 371 AYELFDDVILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 371 ~~~~~D~ii~L~~G~iv~~G~~~~~~ 396 (1085)
+..++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999987663
No 384
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-35 Score=332.34 Aligned_cols=211 Identities=23% Similarity=0.382 Sum_probs=168.9
Q ss_pred cceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCc
Q 001400 814 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 893 (1085)
Q Consensus 814 ~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 893 (1085)
+-++.|+|+.+++. +++++|+++||+|++||++||+|+|||||||++++|.+... .+|+|.|||+
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 34578888877662 34569999999999999999999999999999999999765 4799999999
Q ss_pred cCC---hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------ccccCC
Q 001400 894 PKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGL 963 (1085)
Q Consensus 894 ~~~---~~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~ 963 (1085)
++. .+..|+.||||||+..++. -||.+|+.|+.. +... +.+-++.+..++.+.- ...+|.
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn~-----sas~----eeV~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGNP-----SASD----EEVVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCCC-----CcCH----HHHHHHHHHcCcHHHHHhccccchhhHhh
Confidence 864 4668899999999887774 599999998731 2222 2233444444443321 222333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEe
Q 001400 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1085)
Q Consensus 964 ~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~ 1043 (1085)
.| ..|||||||||+||||++.+|+|+++|||||+||.++.+.+++.+.+. ..|+|+|+|.|+. ++.+.||+|++|+
T Consensus 484 rG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~ 559 (591)
T KOG0057|consen 484 RG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLD 559 (591)
T ss_pred cc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEE
Confidence 33 459999999999999999999999999999999999999999999994 4699999999996 4788999999998
Q ss_pred cCcEEEEecCC
Q 001400 1044 RGGELIYAGPL 1054 (1085)
Q Consensus 1044 ~gG~~~~~g~~ 1054 (1085)
+ |++...|+-
T Consensus 560 n-G~v~e~gth 569 (591)
T KOG0057|consen 560 N-GTVKEYGTH 569 (591)
T ss_pred C-CeeEEeccH
Confidence 6 678877764
No 385
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.3e-35 Score=312.18 Aligned_cols=194 Identities=31% Similarity=0.447 Sum_probs=160.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCC-CCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1085)
+++|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999998876 999999998775432 2357899999974 4677
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.++....+... ......++++++.+||++..++.+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 899999987543211000 000123677889999987666554
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++..++|+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE--GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 469999999999999999999999999999999999999999999998763 45666688889999999999999999
Q ss_pred Ce
Q 001400 384 GQ 385 (1085)
Q Consensus 384 G~ 385 (1085)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 386
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=317.20 Aligned_cols=213 Identities=24% Similarity=0.308 Sum_probs=170.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCCC---CCceEEEEccCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVA 222 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 222 (1085)
..+|+|+|++|++|++++|+||||||||||+++|+|.+++. .+.+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35999999999999999999999999999999999998642 135999999998875432 2467999999998889
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
.+||+||+.++.+....... . .+....++++++.+||.+..+... +.
T Consensus 96 ~~tv~enl~~~~~~~~~~~~------------------~--------------~~~~~~~~~~l~~~~l~~~~~~~~-~~ 142 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKS------------------K--------------KELQERVRWALEKAQLWDEVKDRL-DA 142 (250)
T ss_pred CCcHHHHHHHHHHhccccCC------------------H--------------HHHHHHHHHHHHHcCCCcchhhhh-cC
Confidence 99999999886432210000 0 001123677888899854211111 23
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++++.++|+.+++.+++|++++|+
T Consensus 143 ~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l~ 219 (250)
T PRK14247 143 PAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--D-MTIVLVTHFPQQAARISDYVAFLY 219 (250)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCEEEEEE
Confidence 3457999999999999999999999999999999999999999999999853 3 556668888889999999999999
Q ss_pred CCeEEEecChhhHH
Q 001400 383 EGQIVYQGPRVSVL 396 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1085)
+|++++.|+.+++.
T Consensus 220 ~G~i~~~g~~~~~~ 233 (250)
T PRK14247 220 KGQIVEWGPTREVF 233 (250)
T ss_pred CCeEEEECCHHHHH
Confidence 99999999987763
No 387
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=322.73 Aligned_cols=205 Identities=21% Similarity=0.299 Sum_probs=167.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-------CCceEEEEccCCC-
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDW- 219 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-------~~~~~~yv~Q~d~- 219 (1085)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999998876 999999998875421 2356999999962
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcc-ccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTL 298 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 298 (1085)
.+...||+||+.|.....+... .+....++++++.+||.. ..+..
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 2334799999987543221100 000123677888999963 44544
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++.+++|++
T Consensus 143 -----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 -----PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQS--GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeccHHHHHHhCCEE
Confidence 4569999999999999999999999999999999999999999999998653 455666788888999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 001400 379 ILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~ 396 (1085)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 388
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.3e-34 Score=318.29 Aligned_cols=202 Identities=22% Similarity=0.255 Sum_probs=164.2
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC--CeeeeEEEEcCccCChhcc-cceEEEEccCCC--CCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQETF-ARISGYCEQNDI--HSPG 916 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~--~~~~G~i~i~g~~~~~~~~-~~~~gy~~Q~~~--~~~~ 916 (1085)
..+|+|+||+|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|.++..... ++.++|++|++. +.+.
T Consensus 16 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~ 95 (254)
T PRK10418 16 QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPL 95 (254)
T ss_pred cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCcc
Confidence 3589999999999999999999999999999999998652 1168999999987653322 357999999974 4466
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc---cccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL---SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlD 993 (1085)
.|+.+++.+.+..... .. ..+.++++++.+++.+. .+.. +..||+|||||++|||||+.+|+|||||
T Consensus 96 ~~~~~~~~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~lLlLD 165 (254)
T PRK10418 96 HTMHTHARETCLALGK---PA--DDATLTAALEAVGLENAARVLKLY-----PFEMSGGMLQRMMIALALLCEAPFIIAD 165 (254)
T ss_pred ccHHHHHHHHHHHcCC---Ch--HHHHHHHHHHHcCCCChhhhhhcC-----CcccCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7999988664322211 11 22457889999998752 2332 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 166 EPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 226 (254)
T PRK10418 166 EPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-GRIVEQGDVE 226 (254)
T ss_pred CCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999998764 899999999986 46678999999985 7899888754
No 389
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=318.45 Aligned_cols=221 Identities=19% Similarity=0.256 Sum_probs=172.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1085)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999998876 9999999988754321 2358999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
+||+||+.++....... +........ ....+ . ..+....++.+++.+||++..++.+
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~~~---~~~~~--~-----------~~~~~~~~~~~l~~~gl~~~~~~~~---- 151 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLLKT---PAFRR--A-----------ESEALDRAATWLERVGLLEHANRQA---- 151 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhccc---ccccc--c-----------hhHHHHHHHHHHHhCChhhhhhCCh----
Confidence 99999999864311000 000000000 00000 0 0011234677889999987666554
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
+.|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|++
T Consensus 152 -~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 152 -GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEH-NVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999987533 45666688899999999999999999
Q ss_pred CeEEEecChhhHH
Q 001400 384 GQIVYQGPRVSVL 396 (1085)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1085)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999987653
No 390
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=319.67 Aligned_cols=205 Identities=20% Similarity=0.295 Sum_probs=166.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
+.+|+|+|++|++|++++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 35999999999999999999999999999999999988641 12499999999876432 124579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc----cccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCAD 296 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 296 (1085)
++ +||+||+.|..+..+... + .....++++++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGANK--K--------------------------------DLDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHcCCCcchhhhhc
Confidence 77 899999988643221100 0 0012367788888884 2334
Q ss_pred ccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcC
Q 001400 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1085)
Q Consensus 297 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1085)
+ .+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|
T Consensus 150 ~-----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~-~tiiivsH~~~~~~~~~d 221 (258)
T PRK14268 150 S-----PALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--D-YTIVIVTHNMQQAARISD 221 (258)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHHhCC
Confidence 3 3457999999999999999999999999999999999999999999998853 3 566668889999999999
Q ss_pred eEEEecCCeEEEecChhhH
Q 001400 377 DVILLSEGQIVYQGPRVSV 395 (1085)
Q Consensus 377 ~ii~L~~G~iv~~G~~~~~ 395 (1085)
+|++|++|++++.|+.+++
T Consensus 222 ~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred EEEEEECCEEEEeCCHHHH
Confidence 9999999999999998776
No 391
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-35 Score=323.60 Aligned_cols=205 Identities=23% Similarity=0.331 Sum_probs=169.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC----CCceEEEEccCCC-CCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDW-QVA 222 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 222 (1085)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++++ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999876 999999999875421 2467999999974 234
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
..||.|++.|+....+... ......++++++.+||+...++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 5699999988643221100 001224788999999988777765
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKY-GITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecChHHHhc-CCEEEEEE
Confidence 4699999999999999999999999999999999999999999999987543 4555557788888765 99999999
Q ss_pred CCeEEEecChhhHH
Q 001400 383 EGQIVYQGPRVSVL 396 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1085)
+|++++.|+.+++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999988875
No 392
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=321.91 Aligned_cols=208 Identities=23% Similarity=0.328 Sum_probs=164.7
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC--C-CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|.++.. ..+++.+||++|++
T Consensus 50 ~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 129 (286)
T PRK14275 50 GEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKP 129 (286)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcEEEECCCC
Confidence 44569999999999999999999999999999999999632 1 1258999999987532 13456799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
.+++. |++||+.+....+... ......+.+.++++.+++.. +.+... ..+..||||||||++|||||+.+|++|
T Consensus 130 ~l~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~~--~~~~~LSgGq~qrv~LAraL~~~p~ll 204 (286)
T PRK14275 130 NPFPK-SIFDNIAYGPRLHGIN--DKKQLEEIVEKSLRKAALWDEVSDRLD--KNALGLSGGQQQRLCVARTLAVEPEIL 204 (286)
T ss_pred CCCcc-CHHHHHHhHHHhcCCC--cHHHHHHHHHHHHHHhCCccchhhHhh--CChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 88775 9999998864322111 12223455677888887742 111111 123579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.+|++++|++ |+++..|+..
T Consensus 205 lLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~~-G~i~~~g~~~ 266 (286)
T PRK14275 205 LLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFYE-GVLVEHAPTA 266 (286)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999999864 689999999986 46778999999985 7898888753
No 393
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=316.91 Aligned_cols=210 Identities=20% Similarity=0.252 Sum_probs=166.3
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhC--CCCceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
++|+|+|+.|++|++++|+||||||||||+++|+|.++ |..+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 59999999999999999999999999999999999986 2223589999999887421 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+ +||+||+.+.......... . ....+++++++.+||........ +
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~~-------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~-~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLSR-------------------A--------------EMDERVEWALTKAALWNEVKDKL-H 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCCH-------------------H--------------HHHHHHHHHHHHcCCChhhHHHH-h
Confidence 7 8999999876432110000 0 00123677888888743111111 1
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
.....|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+ + ++|+.++|+..++.+++|++++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--D-YTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999853 3 45666888888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|+++..|+.+++.
T Consensus 229 ~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 229 YLGELIEFGNTDTIF 243 (260)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987764
No 394
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=7.1e-35 Score=314.52 Aligned_cols=198 Identities=22% Similarity=0.336 Sum_probs=160.1
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~ 916 (1085)
++..+++|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 18 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~- 94 (225)
T PRK10247 18 GDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDISTLKPEIYRQQVSYCAQTPTLFG- 94 (225)
T ss_pred CCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEcCcCCHHHHHhccEEEeccccccc-
Confidence 44579999999999999999999999999999999999765 568999999986532 234567999999988876
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.|++||+.+....+.. . .....++++++.+++. ...+.. +..||+|||||++|||||+.+|++|+||||
T Consensus 95 ~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 164 (225)
T PRK10247 95 DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSGGEKQRISLIRNLQFMPKVLLLDEI 164 (225)
T ss_pred ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 4999999875433211 1 1123467889999985 344443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-CCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 996 TSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
|+|||+.++..+.+.|+++.+ .|.|||++||+++. + +.+|++++|.+.+..+..|
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~~~ 220 (225)
T PRK10247 165 TSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQEA 220 (225)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHhhh
Confidence 999999999999999999875 48999999999863 4 5699999995333334333
No 395
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-34 Score=357.08 Aligned_cols=206 Identities=22% Similarity=0.309 Sum_probs=165.9
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1085)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|. +|+|.+||.++++..+ ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5999999999999999999999999999999999999887 9999999999876543 5789999999998875 9
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
++|||.++.. ...+.+.+++ +... .++.++ .|++..||.+|+. ..
T Consensus 431 i~~NI~~~~~-----~~d~~i~~a~------------------~~~g---------l~~~i~--~lp~Gldt~i~e~-g~ 475 (592)
T PRK10790 431 FLANVTLGRD-----ISEEQVWQAL------------------ETVQ---------LAELAR--SLPDGLYTPLGEQ-GN 475 (592)
T ss_pred HHHHHHhCCC-----CCHHHHHHHH------------------HHcC---------cHHHHH--hccccccccccCC-CC
Confidence 9999988521 0001111111 1000 111222 2567789999974 45
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
+||||||||++|||||+.+|+|++||||||+||+.++..|.+.|+++.. ++|+|+ ++|.. +....||+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIi-vtHr~-~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVV-IAHRL-STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEE-Eecch-HHHHhCCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999998753 456555 55554 4566799999999999
Q ss_pred EEEecChhhHHH
Q 001400 386 IVYQGPRVSVLD 397 (1085)
Q Consensus 386 iv~~G~~~~~~~ 397 (1085)
++..|+++++.+
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 396
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=320.45 Aligned_cols=204 Identities=28% Similarity=0.377 Sum_probs=169.4
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-----CCceEEEEccCCC-CCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDW-QVA 222 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~~ 222 (1085)
.+|+|+|++|++||+++|+||||||||||+++|+|.+++. +|+|+++|.++.... .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5999999999999999999999999999999999998876 999999998874211 2457999999963 344
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
.+||.||+.|+....+. .+ . .....+.++++.+||.+..++.+
T Consensus 93 ~~tv~e~i~~~~~~~~~-~~---------~------------------------~~~~~~~~~l~~~~L~~~~~~~~--- 135 (275)
T PRK13639 93 APTVEEDVAFGPLNLGL-SK---------E------------------------EVEKRVKEALKAVGMEGFENKPP--- 135 (275)
T ss_pred cccHHHHHHHHHHHcCC-CH---------H------------------------HHHHHHHHHHHHCCCchhhcCCh---
Confidence 57999999875321110 00 0 01123677899999988777665
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
+.||||||||++||+||+.+|++++|||||+|||+.++.++.+.|+++++. +++|+.++|+.+++.++||++++|+
T Consensus 136 --~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~--~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 136 --HHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKE--GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998753 4556668899999999999999999
Q ss_pred CCeEEEecChhhHH
Q 001400 383 EGQIVYQGPRVSVL 396 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1085)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988774
No 397
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=320.78 Aligned_cols=205 Identities=26% Similarity=0.343 Sum_probs=168.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-----CCCceEEEEccCCC-CC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDW-QV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~ 221 (1085)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++... ..++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35999999999999999999999999999999999999876 99999999987421 12357999999975 34
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
...|+.||+.+.....+... . +....++.+++.+||.+..++.+
T Consensus 91 ~~~~~~~~l~~~~~~~~~~~--------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~-- 134 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVPE--------------------A--------------EITRRVDEALTLVDAQHFRHQPI-- 134 (271)
T ss_pred ccccHHHHHHHHHHHcCCCH--------------------H--------------HHHHHHHHHHHHcCCHhHhcCCc--
Confidence 55689999987543221100 0 00123677889999987776654
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++.. +++|+.++|+..++.+++|++++|
T Consensus 135 ---~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 135 ---QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQ--GNHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998753 445666889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999987764
No 398
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=316.61 Aligned_cols=209 Identities=25% Similarity=0.278 Sum_probs=165.6
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..... +.+|+|.++|.++.. ...++.++|++|++
T Consensus 17 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 96 (253)
T PRK14261 17 GEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRP 96 (253)
T ss_pred CCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCC
Confidence 4467999999999999999999999999999999999964321 247999999987642 23456799999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++. ||+||+.|....+.. ......++.+.++++.+++.+........ .+..||+|||||++|||||+.+|++++
T Consensus 97 ~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~~LS~G~~qrv~laral~~~p~lll 172 (253)
T PRK14261 97 NPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHD-SALSLSGGQQQRLCIARTLAVNPEVIL 172 (253)
T ss_pred ccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhc-ChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88875 999999886543211 11223345577788888774311111111 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.+|++++|++ |+++..|+..
T Consensus 173 LDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~i~~~g~~~ 233 (253)
T PRK14261 173 MDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GKLIEFDKTT 233 (253)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CEEEEcCCHH
Confidence 9999999999999999999999865 689999999986 46678999999985 7888888753
No 399
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-35 Score=330.47 Aligned_cols=202 Identities=26% Similarity=0.375 Sum_probs=165.9
Q ss_pred ceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCC
Q 001400 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAE 223 (1085)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 223 (1085)
+.++|+|+|+++++||.++|+|++|||||||++.|+|-++++ +|+|+.||.++..... ++.+++++|...+| .
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF-~ 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRVHLF-S 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccchHHH-H
Confidence 457999999999999999999999999999999999999887 9999999998876654 46889999988544 5
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCC-------ccccc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL-------DTCAD 296 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~d 296 (1085)
.|+|+||..+...- + .+.+-++++..|| ++..|
T Consensus 426 ~Tlr~NL~lA~~~A---s-------------------------------------DEel~~aL~qvgL~~l~~~~p~gl~ 465 (573)
T COG4987 426 GTLRDNLRLANPDA---S-------------------------------------DEELWAALQQVGLEKLLESAPDGLN 465 (573)
T ss_pred HHHHHHHhhcCCCC---C-------------------------------------HHHHHHHHHHcCHHHHHHhChhhhh
Confidence 69999998753210 0 0113334444444 34678
Q ss_pred ccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcC
Q 001400 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1085)
Q Consensus 297 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1085)
|.+|+ +.+.||||||||++|||+|+.++++++|||||.|||+.|..++++.+.+.++ ++| ++.++|+...+ +.||
T Consensus 466 t~lge-~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~--~kT-ll~vTHrL~~l-e~~d 540 (573)
T COG4987 466 TWLGE-GGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE--GKT-LLMVTHRLRGL-ERMD 540 (573)
T ss_pred chhcc-CCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc--CCe-EEEEecccccH-hhcC
Confidence 89986 5668999999999999999999999999999999999999999999987654 455 44566766554 6789
Q ss_pred eEEEecCCeEEEecChhhHHH
Q 001400 377 DVILLSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 377 ~ii~L~~G~iv~~G~~~~~~~ 397 (1085)
+|++|++|+++++|.+.+++.
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999998864
No 400
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2e-34 Score=315.23 Aligned_cols=213 Identities=21% Similarity=0.252 Sum_probs=168.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhh--CCCCceeeEEEECCccCCCCCC----CceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~i~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 221 (1085)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.+ +|. +|+|.++|.++..... +..++|++|++.++
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999985 444 9999999988754322 23489999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcc-ccccccc
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTLVG 300 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg 300 (1085)
+.+|++|++.+............ ... ..+....++.+++.+||+. ..++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~~~-------------~~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARGEE-------------PLD--------------LLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhcccccc-------------ccc--------------HHHHHHHHHHHHHHcCCchhhcccccc
Confidence 99999999987543211000000 000 0001234788899999974 4554442
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhh-cCeEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL-FDDVI 379 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~-~D~ii 379 (1085)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+.+++... +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-P-DRSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CcEEEEEEecHHHHHhhcCCeEE
Confidence 24999999999999999999999999999999999999999999999864 2 45566688888888888 89999
Q ss_pred EecCCeEEEecChhhHH
Q 001400 380 LLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~ 396 (1085)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999987543
No 401
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=348.28 Aligned_cols=218 Identities=24% Similarity=0.315 Sum_probs=177.2
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~~~~ 914 (1085)
+++..+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++.++
T Consensus 8 ~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 85 (491)
T PRK10982 8 FPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLV 85 (491)
T ss_pred eCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccc
Confidence 345679999999999999999999999999999999999866 468999999987542 22356799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+.+||+||+.+................+.++++++.+++.+..+..+ .+|||||||||+|||||+.+|++|||||
T Consensus 86 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDE 160 (491)
T PRK10982 86 LQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDE 160 (491)
T ss_pred cCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 89999999987532110100122333456788999999876655543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc-hHHHHHHH
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK-SCELIKYF 1065 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~-~~~~~~~~ 1065 (1085)
||+|||+.++..+++.|++++++|.|||++||+++ ++...||++++|++ |+++..|+..+. ..++.+.+
T Consensus 161 Pt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~~~~~~~~~~~ 230 (491)
T PRK10982 161 PTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAGLTMDKIIAMM 230 (491)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhhCCHHHHHHHH
Confidence 99999999999999999999878999999999986 47788999999985 789998876553 23344433
No 402
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=316.40 Aligned_cols=204 Identities=25% Similarity=0.336 Sum_probs=164.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC--C-eeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
+...+|+|+||+|++||++||+|+||||||||+++|+|...+ . +.+|+|.++|.++.. ...++.++|++|++
T Consensus 15 ~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~ 94 (251)
T PRK14251 15 GNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQP 94 (251)
T ss_pred CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCC
Confidence 445799999999999999999999999999999999997541 1 358999999987532 23456799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc----ccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
.+++ .|++||+.+....+.. .......+.++++++.+++.. ..+. .+.+||+|||||++|||||+.+|
T Consensus 95 ~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~Gq~qr~~laral~~~p 166 (251)
T PRK14251 95 TPFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLDR-----NAQAFSGGQQQRICIARALAVRP 166 (251)
T ss_pred ccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhcc-----ChhhCCHHHHHHHHHHHHHhcCC
Confidence 8775 7999999875432211 111223345678888888742 1222 23579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
++|||||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 167 ~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 230 (251)
T PRK14251 167 KVVLLDEPTSALDPISSSEIEETLMELK-HQYTFIMVTHNLQ-QAGRISDQTAFLMN-GDLIEAGPT 230 (251)
T ss_pred CEEEecCCCccCCHHHHHHHHHHHHHHH-cCCeEEEEECCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999985 4799999999986 46778999999985 688888775
No 403
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=320.64 Aligned_cols=206 Identities=24% Similarity=0.406 Sum_probs=164.4
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCC--CCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGLT 918 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~--~~~t 918 (1085)
++.+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+......++.++|++|++.+. ...+
T Consensus 19 ~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~i~~v~q~~~~~~~~~~~ 96 (272)
T PRK15056 19 GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPTRQALQKNLVAYVPQSEEVDWSFPVL 96 (272)
T ss_pred CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEhHHhhccceEEEeccccccccCCCcc
Confidence 3569999999999999999999999999999999999866 46899999998764332334699999997652 2347
Q ss_pred HHHHHHHhhhhcC-CCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 919 VLESLLFSAWLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 919 v~e~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
+.+++.++..... ..........+.++++++.+++.+..+..+ ..||+|||||++|||||+.+|+||+|||||+
T Consensus 97 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~ 171 (272)
T PRK15056 97 VEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGGQKKRVFLARAIAQQGQVILLDEPFT 171 (272)
T ss_pred hhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 8888865321100 000111223345678899999977665543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|+++++ + |++++.|+..+
T Consensus 172 ~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g~~~~ 227 (272)
T PRK15056 172 GVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASGPTET 227 (272)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHHh
Confidence 99999999999999999777999999999986 477889998766 4 78998887654
No 404
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-34 Score=312.23 Aligned_cols=206 Identities=26% Similarity=0.332 Sum_probs=172.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-CCceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 226 (1085)
+++|+|+|+.++||++++|+||||||||||+++|+|.+++. +|+|+++|+++.+.. .++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999876 899999999876432 24679999999988888999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.+.....+.. .. .....++++++.+||++..++.+ ..
T Consensus 90 ~~nl~~~~~~~~~~--~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (232)
T cd03300 90 FENIAFGLRLKKLP--KA--------------------------------EIKERVAEALDLVQLEGYANRKP-----SQ 130 (232)
T ss_pred HHHHHHHHHhcCCC--HH--------------------------------HHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 99998764332110 00 01123678899999987776654 46
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++..+ .+|+.++|...++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~-~tiii~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELG-ITFVFVTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999875334 4555577888889999999999999999
Q ss_pred EEecChhhHH
Q 001400 387 VYQGPRVSVL 396 (1085)
Q Consensus 387 v~~G~~~~~~ 396 (1085)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999876653
No 405
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.1e-34 Score=318.78 Aligned_cols=205 Identities=25% Similarity=0.350 Sum_probs=168.8
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh------hcccceEEEEccCCC--
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDI-- 912 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy~~Q~~~-- 912 (1085)
++.+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 24 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 24 HQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred ceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 3579999999999999999999999999999999999865 568999999987542 124567999999973
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
+.+..|+.|++.+..... ...........++++++.+++. ...+.. +..||+|||||++|||||+.+|+|||
T Consensus 102 ~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~Ge~qrl~laral~~~p~lll 174 (268)
T PRK10419 102 VNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PPQLSGGQLQRVCLARALAVEPKLLI 174 (268)
T ss_pred cCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----CccCChHHHHHHHHHHHHhcCCCEEE
Confidence 567789999987643211 1122333445678899999885 344443 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|||||+|||+.++..+.+.|+++.++ |.|||++||+++ .+.+.+|++++|+ +|++++.|+..+
T Consensus 175 LDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~~ 238 (268)
T PRK10419 175 LDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMD-NGQIVETQPVGD 238 (268)
T ss_pred EeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEE-CCEEeeeCChhh
Confidence 99999999999999999999998764 899999999986 4667899999998 478999987655
No 406
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=6.1e-35 Score=312.69 Aligned_cols=200 Identities=27% Similarity=0.399 Sum_probs=161.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCCCceEEEEccCCCCC--CCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQV--AEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 225 (1085)
.++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. ..+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999998876 9999999986542 345799999997653 3489
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.++...... .+.. .. ......++.+++.+||++..++.+ .
T Consensus 87 v~e~l~~~~~~~~~--~~~~--------------~~--------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 131 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR--------------LS--------------KADKAKVDEALERVGLSELADRQI-----G 131 (213)
T ss_pred HHHHHHhccccccc--cccC--------------CC--------------HHHHHHHHHHHHHcCCHHHHhCCc-----c
Confidence 99999875321100 0000 00 001224778899999987666654 4
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++++.++|+.+++.+++|++++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999999875 3 455666889999999999999999886
Q ss_pred EEEec
Q 001400 386 IVYQG 390 (1085)
Q Consensus 386 iv~~G 390 (1085)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66554
No 407
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=320.81 Aligned_cols=202 Identities=23% Similarity=0.290 Sum_probs=163.5
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++.. ...++.++|++|++
T Consensus 50 ~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~~~~~~~i~~v~q~~ 129 (285)
T PRK14254 50 GDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDPVALRRRIGMVFQKP 129 (285)
T ss_pred CCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccchHhhhccEEEEecCC
Confidence 445799999999999999999999999999999999997542 1358999999987532 23567899999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc----ccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
.+++. |+.||+.+....+.. .. ...+.++++++.+++.. ..+.. +..||+|||||++|||||+.+|
T Consensus 130 ~l~~~-tv~enl~~~~~~~~~---~~-~~~~~~~~~l~~~~l~~~i~~~~~~~-----~~~LSgGe~qrv~LAraL~~~p 199 (285)
T PRK14254 130 NPFPK-SIYDNVAYGLKIQGY---DG-DIDERVEESLRRAALWDEVKDQLDSS-----GLDLSGGQQQRLCIARAIAPDP 199 (285)
T ss_pred ccCcC-CHHHHHHHHHHHcCC---cH-HHHHHHHHHHHHcCCCchhHHHHhCC-----cccCCHHHHHHHHHHHHHHcCC
Confidence 87775 999999876433211 11 23345788888888753 22222 3579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEE-EecCcEEEEecCC
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLF-MKRGGELIYAGPL 1054 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~-l~~gG~~~~~g~~ 1054 (1085)
+||||||||+|||+.++..+.+.|+++++ +.|||++||+++ .+...+|++++ |+ .|+++..|+.
T Consensus 200 ~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l~-~G~i~~~g~~ 264 (285)
T PRK14254 200 EVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFLT-GGELVEFDDT 264 (285)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEee-CCEEEEeCCH
Confidence 99999999999999999999999999875 489999999986 46678999764 56 5788888874
No 408
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2e-34 Score=317.47 Aligned_cols=208 Identities=28% Similarity=0.407 Sum_probs=170.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1085)
..+|+|+|+.+++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 36999999999999999999999999999999999998876 9999999988755321 34689999998778889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||+||+.++..... . . .. .+. .+....++++++.+||.+..++.+
T Consensus 91 tv~e~l~~~~~~~~--~-------~------~~-~~~--------------~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (256)
T TIGR03873 91 TVRDVVALGRIPHR--S-------L------WA-GDS--------------PHDAAVVDRALARTELSHLADRDM----- 135 (256)
T ss_pred CHHHHHHhcchhhh--h-------h------cc-CCC--------------HHHHHHHHHHHHHcCcHhhhcCCc-----
Confidence 99999987421000 0 0 00 000 001124677889999987666654
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.+. +++|+.++|+.+++.+++|+|++|++|
T Consensus 136 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 136 STLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAAT--GVTVVAALHDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 469999999999999999999999999999999999999999999998642 456666888899999999999999999
Q ss_pred eEEEecChhhH
Q 001400 385 QIVYQGPRVSV 395 (1085)
Q Consensus 385 ~iv~~G~~~~~ 395 (1085)
+++..|+.+++
T Consensus 214 ~i~~~g~~~~~ 224 (256)
T TIGR03873 214 RVVAAGPPREV 224 (256)
T ss_pred CEEEecCHHHh
Confidence 99999988765
No 409
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=318.89 Aligned_cols=205 Identities=20% Similarity=0.287 Sum_probs=169.4
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCC-CCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1085)
..+|+|+|++|++||+++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999876 999999998875422 2467999999974 5778
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcc
Q 001400 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1085)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1085)
.||.||+.++....+.. + . ....+++++++.+||.+..++.+
T Consensus 97 ~tv~eni~~~~~~~~~~-~---------~------------------------~~~~~~~~~l~~~~l~~~~~~~~---- 138 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R---------E------------------------EMIKRVDEALLAVNMLDFKTREP---- 138 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H---------H------------------------HHHHHHHHHHHHCCCHhHhhCCc----
Confidence 89999998754321110 0 0 00123678889999987666654
Q ss_pred cccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecC
Q 001400 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1085)
Q Consensus 304 ~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~ 383 (1085)
..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 139 -ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKY-QLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999987643 445566788888886 6999999999
Q ss_pred CeEEEecChhhHH
Q 001400 384 GQIVYQGPRVSVL 396 (1085)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1085)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 410
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.2e-34 Score=349.59 Aligned_cols=201 Identities=22% Similarity=0.332 Sum_probs=171.3
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hc-ccceEEEEccCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ET-FARISGYCEQNDIHSP 915 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~-~~~~~gy~~Q~~~~~~ 915 (1085)
++..+|+|+||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.++.. .. .++.+||++|++.+++
T Consensus 22 ~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 99 (510)
T PRK15439 22 SGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFP 99 (510)
T ss_pred CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEeccCccCC
Confidence 45679999999999999999999999999999999999866 468999999987542 11 2346999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Q 001400 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEP 995 (1085)
.+||+||+.|.... .....+.++++++.+++.+..+..+ ..|||||||||+|||||+.+|+|||||||
T Consensus 100 ~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~aL~~~p~lllLDEP 167 (510)
T PRK15439 100 NLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSA-----GSLEVADRQIVEILRGLMRDSRILILDEP 167 (510)
T ss_pred CCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 99999999875311 1223456788999999987666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 996 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|+|||+.++..+++.|++++++|.|||++|||++ .+.+.||++++|++ |++++.|+..+
T Consensus 168 t~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~~ 226 (510)
T PRK15439 168 TASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALSGKTAD 226 (510)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecChHH
Confidence 9999999999999999999878999999999986 47788999999985 68888887654
No 411
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=315.44 Aligned_cols=209 Identities=22% Similarity=0.290 Sum_probs=163.6
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC--C-CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|.+||++||+|+||||||||+++|+|... + .+.+|+|.++|.++.. ...++.+||++|++
T Consensus 16 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 95 (252)
T PRK14255 16 GKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQP 95 (252)
T ss_pred CCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCC
Confidence 44679999999999999999999999999999999999643 1 1247999999987631 23456799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++ .|++||+.+....+... ......+.+.+.++.+++......... ..+..||+|||||++|||||+.+|++|+
T Consensus 96 ~~~~-~tv~~nl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~Gq~qrv~laral~~~p~lll 171 (252)
T PRK14255 96 NPFP-FSIYENVIYGLRLAGVK--DKAVLDEAVETSLKQAAIWDEVKDHLH-ESALSLSGGQQQRVCIARVLAVKPDVIL 171 (252)
T ss_pred ccCC-CcHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHHcCCccchhhHHh-cCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8887 69999998764332111 112223345667777776421111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.+|++++|++ |+++..|+..
T Consensus 172 lDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 232 (252)
T PRK14255 172 LDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-GNLIEFADTK 232 (252)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999999865 589999999986 47788999999985 7888888653
No 412
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=317.01 Aligned_cols=208 Identities=25% Similarity=0.290 Sum_probs=165.9
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~ 912 (1085)
+..+|+|+||+|++||+++|+|+||||||||+++|+|.... .+.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 37 ~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~ 116 (272)
T PRK14236 37 DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPN 116 (272)
T ss_pred CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCc
Confidence 45799999999999999999999999999999999997542 1368999999987642 234678999999988
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+++. |++||+.+....... .......+.++++++.+++.+........ .+..||+|||||++|||||+.+|+||||
T Consensus 117 l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~Gq~qrv~laral~~~p~lllL 192 (272)
T PRK14236 117 PFPK-SIYENVVYGLRLQGI--NNRRVLDEAVERSLRGAALWDEVKDRLHE-NAFGLSGGQQQRLVIARAIAIEPEVLLL 192 (272)
T ss_pred cCcc-cHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCChhHHHHhhC-CcccCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 8876 999999876432211 11122334577888888875311111111 1357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||+|||+.++..+++.|+++.+ +.|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 193 DEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 252 (272)
T PRK14236 193 DEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-GKLVEYGDTD 252 (272)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-CEEEecCCHH
Confidence 999999999999999999999865 799999999986 46778999999985 7898888754
No 413
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.8e-34 Score=348.21 Aligned_cols=212 Identities=22% Similarity=0.359 Sum_probs=173.4
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChh----cccceEEEEccCCCC
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIH 913 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gy~~Q~~~~ 913 (1085)
.+++..+|+||||++++||++||+|+||||||||+++|+|..++++.+|+|.++|.++... ..++.+||++|++.+
T Consensus 10 ~~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 89 (500)
T TIGR02633 10 TFGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTL 89 (500)
T ss_pred EeCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeecccc
Confidence 3455679999999999999999999999999999999999865323589999999876431 134569999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCC-cccHHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 914 SPGLTVLESLLFSAWLRLPS-EIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 914 ~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
++.+||.||+.+....+... ........+.++++++.+++.+.. +.. +..|||||||||+|||||+.+|+|||
T Consensus 90 ~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~iA~al~~~p~lll 164 (500)
T TIGR02633 90 VPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYGGGQQQLVEIAKALNKQARLLI 164 (500)
T ss_pred CCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEE
Confidence 89999999998764322110 012233345678899999987543 222 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
|||||+|||+.++..+.+.|++++++|.|||++|||++ .+.+.||++++|++ |++++.|+..+
T Consensus 165 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 227 (500)
T TIGR02633 165 LDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVATKDMST 227 (500)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEeeecCccc
Confidence 99999999999999999999999878999999999986 47778999999985 68888887654
No 414
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=320.28 Aligned_cols=209 Identities=22% Similarity=0.268 Sum_probs=164.9
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|.... .+.+|+|.++|.++.. ..+++.++|++|++
T Consensus 31 ~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~i~~v~q~~ 110 (274)
T PRK14265 31 GGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQVGMVFQRP 110 (274)
T ss_pred CCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhcEEEEccCC
Confidence 445799999999999999999999999999999999997431 1247999999987532 23466899999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++. |+.||+.+....+. .. ....+.++++++.+++.......... .+..||+|||||++|||||+.+|++||
T Consensus 111 ~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~~LSgGq~qrv~LAraL~~~p~lll 184 (274)
T PRK14265 111 NPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKE-KGTALSGGQQQRLCIARAIAMKPDVLL 184 (274)
T ss_pred ccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcC-CcccCCHHHHHHHHHHHHHhhCCCEEE
Confidence 87764 99999987643221 11 11223456777777764211111111 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEe--------cCcEEEEecCCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK--------RGGELIYAGPLGS 1056 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~--------~gG~~~~~g~~~~ 1056 (1085)
|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.+|++++|+ +.|++++.|+..+
T Consensus 185 LDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~~~~~~~~~G~~~~~g~~~~ 255 (274)
T PRK14265 185 MDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTEIDEYGKRRGKLVEFSPTEQ 255 (274)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEecccccccccCceEEEeCCHHH
Confidence 9999999999999999999999864 789999999987 4778899999997 2589999998753
No 415
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=314.30 Aligned_cols=211 Identities=20% Similarity=0.263 Sum_probs=167.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhC--CCCceeeEEEECCccCCCCC-----CCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1085)
+++|+|+|+.+++|++++|+||||||||||+++|+|..+ +..+.+|+|.++|.++.... .++.++|++|++.+
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 359999999999999999999999999999999999732 21124899999999875421 23579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++ .||+||+.++....+.... + .....++++++.+||.+...+..
T Consensus 96 ~~-~tv~~nl~~~~~~~~~~~~--------------------~-------------~~~~~~~~~l~~~~l~~~~~~~~- 140 (250)
T PRK14245 96 FP-KSIFENVAYGLRVNGVKDN--------------------A-------------FIRQRVEETLKGAALWDEVKDKL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH--------------------H-------------HHHHHHHHHHHHcCCCcchhhhh-
Confidence 76 6999999876432211000 0 00123677888899865322222
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|++++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~v~~ 217 (250)
T PRK14245 141 KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--D-YTIVIVTHNMQQAARVSDKTAF 217 (250)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhCCEEEE
Confidence 234567999999999999999999999999999999999999999999999843 3 4566688888999999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|++++.|+.+++.
T Consensus 218 l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 218 FYMGEMVEYDDTKKIF 233 (250)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999988774
No 416
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=348.01 Aligned_cols=206 Identities=27% Similarity=0.334 Sum_probs=170.7
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~~~~ 914 (1085)
+++..+|+||||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 14 ~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~ 91 (501)
T PRK11288 14 FPGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEMRFASTTAALAAGVAIIYQELHLV 91 (501)
T ss_pred ECCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHhCCEEEEEechhcc
Confidence 345679999999999999999999999999999999999866 468999999987532 22456799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+.+||.||+.+................+.++++++.+++.+..+.. +..||||||||++|||||+.+|+||||||
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGq~qrv~laral~~~p~lllLDE 166 (501)
T PRK11288 92 PEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSIGQRQMVEIAKALARNARVIAFDE 166 (501)
T ss_pred CCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 9999999998753211111112233345678899999997655543 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~ 1053 (1085)
||+|||+.++..+++.|+++.++|.|||++|||++ .+...||++++|++ |+++..++
T Consensus 167 Pt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~ 223 (501)
T PRK11288 167 PTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVATFD 223 (501)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecC
Confidence 99999999999999999999878999999999986 47788999999985 67776654
No 417
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=5.9e-33 Score=345.36 Aligned_cols=104 Identities=23% Similarity=0.387 Sum_probs=88.6
Q ss_pred HHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCc
Q 001400 944 VEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVA---NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGR 1019 (1085)
Q Consensus 944 ~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~---~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~ 1019 (1085)
..++++.++|..+ .+.. ...|||||+||+.||++|+. +|++++|||||+|||+.....+++.|+++.++|.
T Consensus 808 ~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~ 882 (924)
T TIGR00630 808 KLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGN 882 (924)
T ss_pred HHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 3567777888643 2332 35799999999999999997 5999999999999999999999999999988899
Q ss_pred eEEEEecCccHHHHHhcCEEEEEe-----cCcEEEEecCC
Q 001400 1020 TIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 1054 (1085)
Q Consensus 1020 tvi~~~H~~~~~~~~~~d~il~l~-----~gG~~~~~g~~ 1054 (1085)
|||+++|+++ ..+.+|++++|. +||++++.|+.
T Consensus 883 TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 883 TVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 9999999975 346799999994 57999999875
No 418
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-34 Score=312.68 Aligned_cols=204 Identities=27% Similarity=0.402 Sum_probs=171.5
Q ss_pred ecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-CCceEEEEccCCCCCCCCCHHH
Q 001400 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRE 228 (1085)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 228 (1085)
+|+|+|++|+||++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999998876 999999998876532 2457999999998899999999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCc
Q 001400 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1085)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1085)
|+.++....+.. . .+ ....+.++++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~--~------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVD--K------------------KE--------------IERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCC--H------------------HH--------------HHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 998764321100 0 00 0123667888999987777655 4699
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEE
Q 001400 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1085)
Q Consensus 309 GGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~ 388 (1085)
|||||||+||+|++.+|++++|||||+|||+.++.++.+.|++++...+ ++++.++|..+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFG-VTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999865434 456667788899999999999999999999
Q ss_pred ecChhhHH
Q 001400 389 QGPRVSVL 396 (1085)
Q Consensus 389 ~G~~~~~~ 396 (1085)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987664
No 419
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=6.7e-35 Score=317.68 Aligned_cols=196 Identities=26% Similarity=0.414 Sum_probs=153.8
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
..+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 468999999999999999999999999999999999876 468999999987532 335667999999987764 69
Q ss_pred HHHHHHHhhhhcCCCcccHHHHH-----HHHHHHHHHc--CCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 919 VLESLLFSAWLRLPSEIELETQR-----AFVEEVMELV--ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
|.||+.+.... ....... ...++.++.+ ++....+. .+.+||+|||||++|||||+.+|++|+
T Consensus 92 v~~nl~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-----~~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADPG-----MSMERVIEAAKLAGAHDFISELPEGYDTIVGE-----QGAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhCcccccchhhc-----CCCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 99999764310 1111100 0112223322 22222222 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|||||+|||+.++..+.+.|+++. +|+|||++||+++. + +.+|++++|++ |++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLST-V-KNADRIIVMEK-GRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999986 48999999999863 4 56999999985 789988874
No 420
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=319.79 Aligned_cols=209 Identities=27% Similarity=0.372 Sum_probs=171.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1085)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999998776 999999998764432 235799999998788889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||.||+.++..... . .. + ... ......++.+++.+||++..++.++
T Consensus 101 tv~e~l~~~~~~~~-~-~~-------------~-~~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 146 (265)
T PRK10575 101 TVRELVAIGRYPWH-G-AL-------------G-RFG--------------AADREKVEEAISLVGLKPLAHRLVD---- 146 (265)
T ss_pred cHHHHHHhCccccc-c-cc-------------c-CCC--------------HHHHHHHHHHHHHcCCHHHhcCCcc----
Confidence 99999987532100 0 00 0 000 0012246788999999876676554
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
.|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|++|
T Consensus 147 -~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~-~~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 147 -SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQER-GLTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 699999999999999999999999999999999999999999999987543 455666888899999999999999999
Q ss_pred eEEEecChhhH
Q 001400 385 QIVYQGPRVSV 395 (1085)
Q Consensus 385 ~iv~~G~~~~~ 395 (1085)
++++.|+.+++
T Consensus 225 ~i~~~~~~~~~ 235 (265)
T PRK10575 225 EMIAQGTPAEL 235 (265)
T ss_pred eEEEecCHHHh
Confidence 99999988765
No 421
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=320.02 Aligned_cols=216 Identities=22% Similarity=0.301 Sum_probs=172.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC--------CCceEEEEccCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--------PPRTSAYVSQQDW 219 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~--------~~~~~~yv~Q~d~ 219 (1085)
..+|+|+|+.+++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 35999999999999999999999999999999999998775334699999998764321 1356899999998
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1085)
+++.+||+||+.+...... . . ... ..+.. ..+.+.+++++++.+||++..|..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~-~------~~~--~~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--P-F------WRT--CFSWF---------------TREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--c-c------hhh--hcccc---------------cHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 8999999999987532100 0 0 000 00000 0011234788999999987777655
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
..|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++..++|+|+
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4699999999999999999999999999999999999999999999987543 4566668888899999999999
Q ss_pred EecCCeEEEecChhhH
Q 001400 380 LLSEGQIVYQGPRVSV 395 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~ 395 (1085)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999987654
No 422
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=312.15 Aligned_cols=201 Identities=21% Similarity=0.366 Sum_probs=168.6
Q ss_pred cceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-CCceEEEEccCCCCCCCCCHHHHHH
Q 001400 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRETLD 231 (1085)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1085)
|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+||.||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999998876 999999998875432 2357999999998899999999998
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhh
Q 001400 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1085)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1085)
+.... ... .. . .....++++++.+||++..++.+ ..|||||
T Consensus 94 ~~~~~-~~~--~~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--LN---A----------------------------AQREKLHAIARQMGIEDLLARLP-----GQLSGGQ 134 (232)
T ss_pred ccccc-ccC--CC---H----------------------------HHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHH
Confidence 75321 000 00 0 01224778899999987777665 4699999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEecC
Q 001400 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1085)
Q Consensus 312 kqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G~ 391 (1085)
||||+||+|++.+|++++|||||+|||..++..+.+.|+++.+.. +++++.++|+..++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999987543 4456668888899999999999999999999999
Q ss_pred hhhHH
Q 001400 392 RVSVL 396 (1085)
Q Consensus 392 ~~~~~ 396 (1085)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 87764
No 423
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=313.03 Aligned_cols=211 Identities=19% Similarity=0.308 Sum_probs=167.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCCC-----CCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1085)
+.+|+|+|++|++|++++|+|||||||||||++|+|.+++. .+.+|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35999999999999999999999999999999999987642 125899999999875321 24569999999987
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++ +||+||+.|.....+.... .....+++.+++.+||........
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDL- 141 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-
Confidence 77 8999999886433211000 000123566788888742111111
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+...+.||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.+ + ++++.++|+..++.+++|++++
T Consensus 142 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~ 218 (251)
T PRK14270 142 KKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEE
Confidence 234467999999999999999999999999999999999999999999999864 3 4566677888899999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|++++.|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 219 FLMGDLIEFNKTEKIF 234 (251)
T ss_pred EECCeEEEeCCHHHHh
Confidence 9999999999988764
No 424
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=3.9e-34 Score=314.67 Aligned_cols=210 Identities=24% Similarity=0.330 Sum_probs=165.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccc-eEEEEccCCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFAR-ISGYCEQNDIHSP 915 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~-~~gy~~Q~~~~~~ 915 (1085)
++..+|+||||++++||++||+|+||||||||+++|+|.....+.+|+|.++|.++.. ...++ .++|++|++.+++
T Consensus 18 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~q~~~~~~ 97 (252)
T CHL00131 18 NENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLGIFLAFQYPIEIP 97 (252)
T ss_pred CCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheeeEEEEeccccccc
Confidence 3457999999999999999999999999999999999962112568999999987643 12222 4789999999999
Q ss_pred CCCHHHHHHHhhhhcCC----CcccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Q 001400 916 GLTVLESLLFSAWLRLP----SEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1085)
Q Consensus 916 ~~tv~e~l~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~il 990 (1085)
.+|+.+++.+....... .........+.+.++++.+++. ...+... ...||+|||||++|||||+.+|+||
T Consensus 98 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~~LSgG~~qrv~la~al~~~p~ll 173 (252)
T CHL00131 98 GVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNV----NEGFSGGEKKRNEILQMALLDSELA 173 (252)
T ss_pred cccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhcccc----ccCCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999998764321110 0111122234567888888886 3444332 1249999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHh-cCEEEEEecCcEEEEecCCC
Q 001400 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 991 llDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~il~l~~gG~~~~~g~~~ 1055 (1085)
||||||+|||+.++..+.+.|+++.++|+|||++||+++. +... +|++++|+ +|++++.|+..
T Consensus 174 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~-~G~i~~~~~~~ 237 (252)
T CHL00131 174 ILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQ-NGKIIKTGDAE 237 (252)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEe-CCEEEEecChh
Confidence 9999999999999999999999987779999999999763 4444 79999997 57999988753
No 425
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.4e-34 Score=304.20 Aligned_cols=179 Identities=25% Similarity=0.316 Sum_probs=149.1
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-----hcccceEEEEccCCC-CC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HS 914 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~-~~ 914 (1085)
+..+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 4569999999999999999999999999999999999876 468999999987531 134567999999973 23
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
...|++||+.+..... ........+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999998864322 1122333456788999999977666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCcc
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPS 1029 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1029 (1085)
||+|||+.++..+.+.|+++.++|+|||++||+++
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999777999999999975
No 426
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=9.9e-35 Score=364.98 Aligned_cols=206 Identities=23% Similarity=0.330 Sum_probs=164.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1085)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|.+||.++.+.. .++.++||+|++.+|. .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 46999999999999999999999999999999999999886 999999999987664 3678999999998775 5
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
|++|||.++.. ....+.+.++++ ..+ .++.+ -.|+...||.+|+. .
T Consensus 568 Ti~eNi~l~~~----~~~~~~i~~al~---~~~------------------------l~~~i--~~lp~gl~t~i~e~-G 613 (710)
T TIGR03796 568 TVRDNLTLWDP----TIPDADLVRACK---DAA------------------------IHDVI--TSRPGGYDAELAEG-G 613 (710)
T ss_pred cHHHHhhCCCC----CCCHHHHHHHHH---HhC------------------------CHHHH--HhCcCcccceeccC-C
Confidence 99999987421 111111111110 000 11111 23667889999975 4
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
.+||||||||++||||++++|++|+||||||+||+.++..|.+.|++ .++|+|+ ++|..+ ....+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl~-~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRLS-TIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCHH-HHHhCCEEEEEeCC
Confidence 68999999999999999999999999999999999999999999985 2455555 556554 45669999999999
Q ss_pred eEEEecChhhHHH
Q 001400 385 QIVYQGPRVSVLD 397 (1085)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1085)
+++..|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999864
No 427
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=316.47 Aligned_cols=212 Identities=22% Similarity=0.311 Sum_probs=168.6
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCC--C---CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKE--F---VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~--~---~~~~~~~yv~Q~d~~~ 221 (1085)
++|+|+|++|++||+++|+||||||||||+++|+|.++|. .+.+|+|+++|+++.. . ..++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5999999999999999999999999999999999998762 1348999999998752 1 1245799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||.||+.++....+.....+ .....++++++.+||........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSKK--------------------------------ELDERVEWALKKAALWDEVKDRL-N 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCHH--------------------------------HHHHHHHHHHHHcCCccchhhhh-c
Confidence 99999999987643221100000 00123667788888743211111 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
.....|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++..++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999999864 3 45666888889999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987764
No 428
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=317.65 Aligned_cols=208 Identities=21% Similarity=0.233 Sum_probs=164.0
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCC-----hhcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKR-----QETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~-----~~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||++||+|+||||||||+++|+|.... .+.+|+|.++|.++. ...+++.+||++|++
T Consensus 21 ~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 100 (264)
T PRK14243 21 GSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVEVRRRIGMVFQKP 100 (264)
T ss_pred CCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHHHhhhEEEEccCC
Confidence 445799999999999999999999999999999999996431 125799999998753 223466799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++ .|+.||+.+....+. .. ....+.++++++.+++....+.... ..+..||+|||||++|||||+.+|+|||
T Consensus 101 ~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LSgGq~qrv~laral~~~p~lll 174 (264)
T PRK14243 101 NPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGLSLSGGQQQRLCIARAIAVQPEVIL 174 (264)
T ss_pred cccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8877 499999987643221 11 1223445667777776421111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEec--------CcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR--------GGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~--------gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ .|++++.|+..
T Consensus 175 LDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~~~ 244 (264)
T PRK14243 175 MDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELTEGGGRYGYLVEFDRTE 244 (264)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccccccccCceEEEeCCHH
Confidence 9999999999999999999999865 589999999987 57889999999972 57999998753
No 429
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-35 Score=305.16 Aligned_cols=195 Identities=27% Similarity=0.422 Sum_probs=170.7
Q ss_pred cceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-----C--CCceEEEEccCCCCCCCCC
Q 001400 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----V--PPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----~--~~~~~~yv~Q~d~~~~~lT 225 (1085)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+. . .+|.+|||+|+..+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 567777775899999999999999999999999987 99999999865332 1 2589999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+-||.|+.... .....|++...||++|..+.+ +.
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~-----P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRY-----PG 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhC-----CC
Confidence 999999974321 011267889999999988754 45
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.|||||||||+|||||++.|++|+||||.+.||-....+|+-+|.++.++. +.-|+.++|...|+..++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 799999999999999999999999999999999999999999999998875 4556778999999999999999999999
Q ss_pred EEEecChhhHH
Q 001400 386 IVYQGPRVSVL 396 (1085)
Q Consensus 386 iv~~G~~~~~~ 396 (1085)
+...|+.+++.
T Consensus 207 V~A~g~~e~v~ 217 (352)
T COG4148 207 VKASGPLEEVW 217 (352)
T ss_pred EEecCcHHHHh
Confidence 99999998875
No 430
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2e-32 Score=344.19 Aligned_cols=209 Identities=30% Similarity=0.422 Sum_probs=171.7
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 895 (1085)
.+.++|++|.++. .++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 477 ~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 543 (710)
T TIGR03796 477 YVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIPR 543 (710)
T ss_pred eEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEeH
Confidence 5777888776631 23469999999999999999999999999999999999876 5689999999986
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------ccccCCCC
Q 001400 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1085)
Q Consensus 896 ~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~ 965 (1085)
++ ..+++.+|||+|++.++.+ |++||+.++. + +.+ ++.++++++..++.+.. +..++..
T Consensus 544 ~~~~~~~lr~~i~~v~Q~~~lf~g-Ti~eNi~l~~----~-~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~- 612 (710)
T TIGR03796 544 EEIPREVLANSVAMVDQDIFLFEG-TVRDNLTLWD----P-TIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG- 612 (710)
T ss_pred HHCCHHHHHhheeEEecCChhhhc-cHHHHhhCCC----C-CCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC-
Confidence 43 4578899999999998854 9999998641 1 111 23466777777765432 3334333
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 966 ~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
+.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|++ .++|+|++||+++ ....+|++++|++
T Consensus 613 G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~- 686 (710)
T TIGR03796 613 GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER- 686 (710)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 357999999999999999999999999999999999999999999986 4899999999975 5577999999985
Q ss_pred cEEEEecCC
Q 001400 1046 GELIYAGPL 1054 (1085)
Q Consensus 1046 G~~~~~g~~ 1054 (1085)
|+++..|+.
T Consensus 687 G~i~~~G~~ 695 (710)
T TIGR03796 687 GKVVQRGTH 695 (710)
T ss_pred CEEEEecCH
Confidence 799998874
No 431
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.2e-34 Score=318.61 Aligned_cols=207 Identities=22% Similarity=0.264 Sum_probs=169.7
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCC--CCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW--QVA 222 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~--~~~ 222 (1085)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999876 999999998875321 1346999999974 567
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-ccccccccC
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLVGD 301 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 301 (1085)
.+||.+++.+..+...... . ......++.+++.+||. ...++.+
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 147 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------P------------------------EQREKQIIETLRQVGLLPDHASYYP-- 147 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------H------------------------HHHHHHHHHHHHHcCCChHHHhcCc--
Confidence 8899999987543211000 0 00112367889999994 5555443
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..+||++++|
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 148 ---HMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred ---hhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 4699999999999999999999999999999999999999999999987533 455666888899999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999887764
No 432
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.6e-34 Score=353.29 Aligned_cols=200 Identities=28% Similarity=0.439 Sum_probs=165.2
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1085)
++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|++||.++.+... ++.++||+|++.+|+ .|
T Consensus 354 ~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~t 429 (574)
T PRK11160 354 PVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-AT 429 (574)
T ss_pred cceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-cc
Confidence 5999999999999999999999999999999999999886 9999999999877643 567999999998776 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCC------cccccccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL------DTCADTLV 299 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~v 299 (1085)
++|||.++.. .... ..+.++++..|+ +++.||.|
T Consensus 430 i~~Ni~~~~~----~~~~------------------------------------~~i~~al~~~~l~~~i~~p~GldT~v 469 (574)
T PRK11160 430 LRDNLLLAAP----NASD------------------------------------EALIEVLQQVGLEKLLEDDKGLNAWL 469 (574)
T ss_pred HHHHhhcCCC----ccCH------------------------------------HHHHHHHHHcCCHHHHcCccccCchh
Confidence 9999987531 0000 012233333333 56789999
Q ss_pred cCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
|+. ...||||||||++||||++.+|++|+||||||+||+.++..|.+.|++..+ ++|+|+ ++|..+.+ ..+|+|+
T Consensus 470 ge~-g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~--~~tvii-itHr~~~~-~~~d~i~ 544 (574)
T PRK11160 470 GEG-GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ--NKTVLM-ITHRLTGL-EQFDRIC 544 (574)
T ss_pred cCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC--CCEEEE-EecChhHH-HhCCEEE
Confidence 975 567999999999999999999999999999999999999999999998753 456555 55555444 5699999
Q ss_pred EecCCeEEEecChhhHHH
Q 001400 380 LLSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~~~ 397 (1085)
+|++|++++.|+++++++
T Consensus 545 ~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 545 VMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEeCCeEEEeCCHHHHHh
Confidence 999999999999998864
No 433
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=317.92 Aligned_cols=210 Identities=24% Similarity=0.356 Sum_probs=171.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1085)
..+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 36999999999999999999999999999999999998876 9999999988754321 35699999999888889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||+||+.++..-.. . ... ..+ ......++++++.+||++..++.+
T Consensus 97 tv~~~~~~~~~~~~-~-~~~-------------~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (265)
T PRK10253 97 TVQELVARGRYPHQ-P-LFT-------------RWR---------------KEDEEAVTKAMQATGITHLADQSV----- 141 (265)
T ss_pred cHHHHHHhCccccc-c-ccc-------------CCC---------------HHHHHHHHHHHHHcCCHHHhcCCc-----
Confidence 99999987521000 0 000 000 001224678899999987666554
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|++++|++|
T Consensus 142 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 142 DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5699999999999999999999999999999999999999999999987533 455666888889999999999999999
Q ss_pred eEEEecChhhHH
Q 001400 385 QIVYQGPRVSVL 396 (1085)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1085)
++++.|+.+++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999987764
No 434
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9.3e-35 Score=311.36 Aligned_cols=195 Identities=24% Similarity=0.356 Sum_probs=162.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-----CCCceEEEEccCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQVA 222 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 222 (1085)
..+|+++|+.++||++++|+|||||||||||++|+|.+++. +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 36999999999999999999999999999999999998876 99999999877421 12467999999998888
Q ss_pred CCCHHHHHHHhhh-hcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 223 EMTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 223 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
.+||+||+.++.. ..+.. . .+....++++++.+||++..++.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~------~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 133 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS------K----------------------------AEAEERALELLEKVGLADKADAYP-- 133 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC------H----------------------------HHHHHHHHHHHHHcCCHhHhhhCc--
Confidence 9999999987532 11100 0 001123677889999987666654
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|++++|
T Consensus 134 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~--~~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 134 ---AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998752 445666889999999999999999
Q ss_pred cCCeE
Q 001400 382 SEGQI 386 (1085)
Q Consensus 382 ~~G~i 386 (1085)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 435
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=322.65 Aligned_cols=235 Identities=27% Similarity=0.393 Sum_probs=186.9
Q ss_pred hcCCCCCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeecccceeeEeCCeEEEEeCCCC
Q 001400 92 AVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPS 171 (1085)
Q Consensus 92 ~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~G 171 (1085)
+..++-|+-.+..|++++- + ...++++|+|+||.+.+|+-++|+||||
T Consensus 325 ~m~LP~P~g~L~Ve~l~~~-------------------------------P-Pg~~~pil~~isF~l~~G~~lgIIGPSg 372 (580)
T COG4618 325 RMPLPAPQGALSVERLTAA-------------------------------P-PGQKKPILKGISFALQAGEALGIIGPSG 372 (580)
T ss_pred CCCCCCCCceeeEeeeeec-------------------------------C-CCCCCcceecceeEecCCceEEEECCCC
Confidence 4556666778888888851 1 1234689999999999999999999999
Q ss_pred CChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHH
Q 001400 172 SGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITE 248 (1085)
Q Consensus 172 sGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 248 (1085)
||||||.++|.|..+|. +|.|.++|.+++...+ .+.+||.||+--+|+ .||.|||. |+.. ...-+.+.+
T Consensus 373 SGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---Rf~~-~~d~~kIie 444 (580)
T COG4618 373 SGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---RFGE-EADPEKVIE 444 (580)
T ss_pred ccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---hccc-cCCHHHHHH
Confidence 99999999999988775 9999999999877654 478999999988777 49999994 2211 111111222
Q ss_pred HHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCchhhhhHHHHHHHHhCCCcEe
Q 001400 249 LARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVL 328 (1085)
Q Consensus 249 ~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vl 328 (1085)
.++ ..+ +.++ ++.|++.+||.||+. ..+||||||||+++|||++++|.++
T Consensus 445 AA~---------------------lAg------vHel--Il~lP~GYdT~iG~~-G~~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 445 AAR---------------------LAG------VHEL--ILRLPQGYDTRIGEG-GATLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred HHH---------------------HcC------hHHH--HHhCcCCccCccCCC-CCCCCchHHHHHHHHHHHcCCCcEE
Confidence 221 111 1222 567999999999975 4589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEEecChhhHHHHH
Q 001400 329 FMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFF 399 (1085)
Q Consensus 329 llDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~~G~~~~~~~~f 399 (1085)
+||||-|+||+.....+.+.+.+... .|+++|+ ++| .+.+...+|+|++|++|++..+|++++++...
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvv-iaH-RPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVV-IAH-RPSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEE-Eec-CHHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 99999999999999999999998765 3555555 433 56789999999999999999999999998754
No 436
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.9e-34 Score=307.25 Aligned_cols=199 Identities=21% Similarity=0.310 Sum_probs=166.0
Q ss_pred ecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC-CCceEEEEccCCCCCCCCCHHH
Q 001400 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRE 228 (1085)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 228 (1085)
+++|+|+++++|++++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999998876 999999999875432 3467999999999899999999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccccCc
Q 001400 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1085)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1085)
|+.+...... ... ...+..++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Ccc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9986432100 000 001223677899999987666654 4699
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeEEE
Q 001400 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1085)
Q Consensus 309 GGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~iv~ 388 (1085)
||||||++||+|++.+|++++|||||+|||..++..+.+.|+++.+.. +++|+.++|+.+++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSER-QRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 999999999999999999999999999999999999999999987532 4566668888899999999999999999998
Q ss_pred ecC
Q 001400 389 QGP 391 (1085)
Q Consensus 389 ~G~ 391 (1085)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 437
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=300.89 Aligned_cols=161 Identities=30% Similarity=0.444 Sum_probs=143.7
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh-----hcccceEEEEccCCCCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHS 914 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~~~ 914 (1085)
++..+++|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.++
T Consensus 11 ~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (178)
T cd03229 11 GQKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALF 88 (178)
T ss_pred CCeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccC
Confidence 44579999999999999999999999999999999999866 468999999987532 34567899999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Q 001400 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDE 994 (1085)
+..|++||+.+. ||+|||||++|||||+.+|++++|||
T Consensus 89 ~~~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDE 126 (178)
T cd03229 89 PHLTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDE 126 (178)
T ss_pred CCCCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 889999987531 89999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 995 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
||+|||+.++..+++.|++++++ |+|+|++||+++ .+.+.+|++++|++|
T Consensus 127 P~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 127 PTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 99999999999999999999876 899999999986 466689999999864
No 438
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=322.02 Aligned_cols=211 Identities=24% Similarity=0.315 Sum_probs=164.6
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCC---CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+++||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++.. ...++.++|++|++
T Consensus 56 ~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~~~~~~~i~~v~q~~ 135 (305)
T PRK14264 56 GDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNLVELRKRVGMVFQSP 135 (305)
T ss_pred CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccHHHHhhceEEEccCC
Confidence 446799999999999999999999999999999999997531 2468999999987532 23456799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCC---------ccc-HHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHH
Q 001400 912 IHSPGLTVLESLLFSAWLRLPS---------EIE-LETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAV 981 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~---------~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~ 981 (1085)
.+++ .|++||+.+....+... ... .....+.++++++.+++.+....... ..+.+||+|||||++|||
T Consensus 136 ~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgGq~qrv~LAr 213 (305)
T PRK14264 136 NPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLD-DNALGLSGGQQQRLCIAR 213 (305)
T ss_pred cccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhc-CccccCCHHHHHHHHHHH
Confidence 8777 49999998764321100 011 12234567788888887421111111 123579999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEE-EEecCcEEEEecCCC
Q 001400 982 ELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL-FMKRGGELIYAGPLG 1055 (1085)
Q Consensus 982 aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il-~l~~gG~~~~~g~~~ 1055 (1085)
||+.+|+||||||||+|||+.++..+++.|+++++ +.|||++||+++ .+.+.+|+++ +|+ .|++++.|+..
T Consensus 214 aL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d~i~~~l~-~G~i~~~g~~~ 285 (305)
T PRK14264 214 CLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISDQTAVFLT-GGELVEYDDTD 285 (305)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcCEEEEEec-CCEEEEeCCHH
Confidence 99999999999999999999999999999999875 589999999986 4678899975 566 57999988754
No 439
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.9e-34 Score=361.28 Aligned_cols=208 Identities=25% Similarity=0.399 Sum_probs=167.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1085)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|.+||.++++... ++.++||+|++.+|. .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35999999999999999999999999999999999999886 9999999999877643 578999999998776 5
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
|++|||.++.. ....+.+.+.+ +.. + .++.+ -.|++..||.+|+. .
T Consensus 554 TI~eNi~~~~~----~~~~~~i~~a~------------------~~~---~------l~~~i--~~lp~gl~T~i~e~-G 599 (694)
T TIGR03375 554 TLRDNIALGAP----YADDEEILRAA------------------ELA---G------VTEFV--RRHPDGLDMQIGER-G 599 (694)
T ss_pred hHHHHHhCCCC----CCCHHHHHHHH------------------HHc---C------hHHHH--HhCcccccceecCC-C
Confidence 99999987521 00011111111 100 0 11112 24677889999975 4
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
.+||||||||++||||++.+|++++||||||+||+.+...|.+.|+++.+ ++|+|+ ++|..+ ....||+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~--~~T~ii-ItHrl~-~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA--GKTLVL-VTHRTS-LLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CCEEEE-EecCHH-HHHhCCEEEEEeCC
Confidence 67999999999999999999999999999999999999999999998753 455555 555554 56789999999999
Q ss_pred eEEEecChhhHHH
Q 001400 385 QIVYQGPRVSVLD 397 (1085)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1085)
++++.|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999998865
No 440
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-34 Score=314.40 Aligned_cols=210 Identities=22% Similarity=0.317 Sum_probs=166.1
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhC--CCCceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
.+|+|+|++|++||+++|+|||||||||||++|+|..+ |....+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 59999999999999999999999999999999999853 4222489999999887431 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+ +||+||+.+.....+... +. .....++++++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~--~~-------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKD--KQ-------------------------------VLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCc--HH-------------------------------HHHHHHHHHHHHcCCchhHHHHH-h
Confidence 7 899999988643221100 00 00123566777888743211111 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998854 3 45666888889999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 441
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.4e-34 Score=359.61 Aligned_cols=206 Identities=24% Similarity=0.370 Sum_probs=161.4
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1085)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|. +|+|.+||.++++.. .++.++||+|++.+|. .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46999999999999999999999999999999999999886 999999999987664 3578999999998765 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
|+||||.++... ...+.+.+++ +... .++.++ .|++..||.+|+. .
T Consensus 570 TIreNI~~g~~~----~~~e~i~~al------------------~~a~---------l~~~i~--~lp~GldT~ige~-G 615 (711)
T TIGR00958 570 SVRENIAYGLTD----TPDEEIMAAA------------------KAAN---------AHDFIM--EFPNGYDTEVGEK-G 615 (711)
T ss_pred CHHHHHhcCCCC----CCHHHHHHHH------------------HHcC---------CHHHHH--hCCCccCCcccCC-C
Confidence 999999885311 0001111110 0000 111111 3567789999975 4
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
.+||||||||++||||++++|+|++||||||+||+.+...|.+ ... ..++ +++.++|..+ ....+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~-TvIiItHrl~-~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASR-TVLLIAHRLS-TVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCC-eEEEEeccHH-HHHhCCEEEEEECC
Confidence 6799999999999999999999999999999999999999888 221 2234 4555666654 45779999999999
Q ss_pred eEEEecChhhHHH
Q 001400 385 QIVYQGPRVSVLD 397 (1085)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1085)
+++.+|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999998864
No 442
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.5e-32 Score=342.87 Aligned_cols=210 Identities=22% Similarity=0.404 Sum_probs=171.8
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 895 (1085)
.+.++|++|.++ ++..+|+|+|++|++|+++||+|+||||||||+++|+|... +.+|+|.+||.++
T Consensus 473 ~I~~~~vsf~y~------------~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYG------------YGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcC------------CCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEEH
Confidence 567778777653 12469999999999999999999999999999999999876 5689999999886
Q ss_pred C---hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------ccccCCCC
Q 001400 896 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1085)
Q Consensus 896 ~---~~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~ 965 (1085)
+ ...+++.+|||+|++.++++ |++||+.++.. + +.+ ++.++++++..++.+.. +..++..
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~---~-~~~----~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~- 608 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK---E-NVS----QDEIWAACEIAEIKDDIENMPLGYQTELSEE- 608 (708)
T ss_pred HHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC---C-CCC----HHHHHHHHHHhCCHHHHHhcccccCcEecCC-
Confidence 4 35678899999999998865 99999987521 1 111 23356677766664422 3334433
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 966 ~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
+.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ +|+|+|++||+++ ..+.+|++++|++
T Consensus 609 G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~- 683 (708)
T TIGR01193 609 GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH- 683 (708)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999985 5899999999986 5678999999985
Q ss_pred cEEEEecCC
Q 001400 1046 GELIYAGPL 1054 (1085)
Q Consensus 1046 G~~~~~g~~ 1054 (1085)
|+++..|+-
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 789988873
No 443
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-34 Score=312.30 Aligned_cols=210 Identities=24% Similarity=0.357 Sum_probs=165.2
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCC--CCceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
++|+|+|++|++||+++|+|||||||||||++|+|.+++ ..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 599999999999999999999999999999999998753 212589999999987531 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+ +||+||+.++....+.... . .....++++++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~-------------------~--------------~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK-------------------K--------------KLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH-------------------H--------------HHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 8999999886433221000 0 00123566677777643211111 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|++++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--D-YTIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEEeCHHHHHhhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998853 3 45666788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 444
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=317.46 Aligned_cols=209 Identities=25% Similarity=0.370 Sum_probs=170.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1085)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++.... .++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999998775 999999998765432 235699999998888889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1085)
||.||+.++..... ..+. ..+ ......++++++.+||++..++.+
T Consensus 92 tv~~~i~~~~~~~~--~~~~-------------~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~----- 136 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLWG-------------RLS---------------AEDNARVNQAMEQTRINHLADRRL----- 136 (255)
T ss_pred cHHHHHHhccchhh--hhcc-------------CCC---------------HHHHHHHHHHHHHcCCHHHHcCCc-----
Confidence 99999987531000 0000 000 001224678899999987777654
Q ss_pred ccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCC
Q 001400 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1085)
Q Consensus 305 ~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G 384 (1085)
..|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++... +++++.++|+.+++.+++|++++|++|
T Consensus 137 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~--~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 137 TDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQ--GKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 469999999999999999999999999999999999999999999988653 455666888899999999999999999
Q ss_pred eEEEecChhhHH
Q 001400 385 QIVYQGPRVSVL 396 (1085)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1085)
++++.|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999887653
No 445
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=314.12 Aligned_cols=212 Identities=20% Similarity=0.261 Sum_probs=169.0
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhC--CCCceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++ |..+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999875 3212489999999887432 224679999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++.+||+||+.++.+..+.... . .....++++++.+||........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~-------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVNR-------------------S--------------EADEIVESSLKRVALWDEVKDRL- 142 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCCH-------------------H--------------HHHHHHHHHHHHcCCchhhhHHh-
Confidence 9999999999875432110000 0 00123677788888854211111
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+..+..|||||||||+||+||+.+|++++|||||+|||..++.++.+.|+++++ + ++|+.++|+.+++.++||++++
T Consensus 143 ~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEE
Confidence 123557999999999999999999999999999999999999999999999864 3 4566688889999999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|+++..|+.+++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 220 FYMGDLVECGETKKIF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999987763
No 446
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=317.61 Aligned_cols=207 Identities=23% Similarity=0.259 Sum_probs=162.6
Q ss_pred CeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC---CCeeeeEEEEcCccCCh-----hcccceEEEEccCCC
Q 001400 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1085)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~---~~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~~ 912 (1085)
+..+|+|+||+|++||++||+|+||||||||+++|+|... ..+.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 36 ~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 115 (271)
T PRK14238 36 EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVEELRTNVGMVFQKPN 115 (271)
T ss_pred CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHHHHhhhEEEEecCCc
Confidence 3468999999999999999999999999999999999753 11368999999987631 234667999999988
Q ss_pred CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 913 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
+++ .|++||+.+....+.. .........+.++++.+++.. +.+.... .+..||+|||||++|||+|+.+|+|||
T Consensus 116 ~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~~LSgGe~qrv~laraL~~~p~lll 190 (271)
T PRK14238 116 PFP-KSIYDNVTYGPKIHGI--KDKKTLDEIVEKSLRGAAIWDELKDRLHD--NAYGLSGGQQQRLCIARCLAIEPDVIL 190 (271)
T ss_pred ccc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchHHHHHhc--CcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 877 4999999876432211 111222344566676665421 2111111 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.+|++++|++ |++++.|+..
T Consensus 191 LDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~ 251 (271)
T PRK14238 191 MDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFLN-GYVNEYDDTD 251 (271)
T ss_pred EeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999999865 799999999986 46778999999985 6888888754
No 447
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.3e-34 Score=356.57 Aligned_cols=209 Identities=26% Similarity=0.419 Sum_probs=171.4
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 895 (1085)
.+.++|+++... ++.++|+|+||+|+||+++||+|+||||||||+++|+|.. + .+|+|.+||.++
T Consensus 349 ~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 577888865431 2356999999999999999999999999999999999976 3 489999999886
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------cccccCCCC
Q 001400 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1085)
Q Consensus 896 ~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~ 965 (1085)
.+ ..+++.++||+|++.++.+ |++||+.++. + +.. ++.++++++..++.+. .+..++..|
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~----~-~~~----~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN----P-DAS----DEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC----C-CCC----HHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 53 5678899999999998865 9999998752 1 112 2345667777666542 234444433
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 966 ~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
.+||||||||++|||||+++|+||+||||||+||+++++.|++.|+++. +++|+|++||+++ ..+.+|++++|++
T Consensus 484 -~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~- 558 (588)
T PRK11174 484 -AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD- 558 (588)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC-
Confidence 4699999999999999999999999999999999999999999999874 6899999999985 5678999999985
Q ss_pred cEEEEecCC
Q 001400 1046 GELIYAGPL 1054 (1085)
Q Consensus 1046 G~~~~~g~~ 1054 (1085)
|+++..|+-
T Consensus 559 G~i~e~G~~ 567 (588)
T PRK11174 559 GQIVQQGDY 567 (588)
T ss_pred CeEeecCCH
Confidence 789988874
No 448
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=323.10 Aligned_cols=205 Identities=19% Similarity=0.309 Sum_probs=166.6
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCC----C----CCCceEEEEccCCC-
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE----F----VPPRTSAYVSQQDW- 219 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~----~----~~~~~~~yv~Q~d~- 219 (1085)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5999999999999999999999999999999999998876 9999999987642 1 12457999999974
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-cccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1085)
.+...||+||+.|+....+.. . . .....++.+++.++|+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~--~--------~------------------------~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN--K--------Q------------------------EAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC--H--------H------------------------HHHHHHHHHHHHcCCChhHhcCC
Confidence 233469999998864321100 0 0 0012366788899995 455554
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
+ ..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|..+++.+++|++
T Consensus 148 ~-----~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 P-----FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEY-KKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred h-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEE
Confidence 4 5699999999999999999999999999999999999999999999987543 455666888899999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 001400 379 ILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~ 396 (1085)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999987763
No 449
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-34 Score=307.73 Aligned_cols=190 Identities=28% Similarity=0.357 Sum_probs=157.3
Q ss_pred cccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCC
Q 001400 837 VLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 837 ~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~ 916 (1085)
+.+++..+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.....+++.++|++|++.+++.
T Consensus 10 ~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 87 (207)
T PRK13539 10 CVRGGRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPA 87 (207)
T ss_pred EEECCeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCcchhhHhhcEEecCCCcCCCC
Confidence 33445679999999999999999999999999999999999866 4689999999875422256678999998888888
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
.|+.||+.+....+. .. .+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|||||||
T Consensus 88 ~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 155 (207)
T PRK13539 88 LTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRRVALARLLVSNRPIWILDEPT 155 (207)
T ss_pred CcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999987543221 11 134678999999976554432 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEe
Q 001400 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~ 1043 (1085)
+|||+.++..+++.|++++++|+|||++||+++ ++ .. |+++.+.
T Consensus 156 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~-~~-~~~~~~~ 199 (207)
T PRK13539 156 AALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GL-PG-ARELDLG 199 (207)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hh-cc-CcEEeec
Confidence 999999999999999998778999999999975 23 33 8887774
No 450
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=4.1e-34 Score=312.93 Aligned_cols=198 Identities=25% Similarity=0.385 Sum_probs=166.4
Q ss_pred EeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHH
Q 001400 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVL 920 (1085)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~tv~ 920 (1085)
+|+||||++++|++++|+|+||||||||+++|+|..+ .+|+|.++|.++.. ..+++.+||++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7899999999999999999999999999999999764 37999999987642 23445689999998888889999
Q ss_pred HHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhc-------CCCEEEEe
Q 001400 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA-------NPSIVFMD 993 (1085)
Q Consensus 921 e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~-------~p~illlD 993 (1085)
||+.+..... .......+.++++++.+++.+..+... ..||+|||||++||+||+. +|++||||
T Consensus 88 ~nl~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPDK----TRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCccC----CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 9998753211 112223456788999999876655543 5799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 994 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999777999999999986 47788999999985 7899888754
No 451
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-34 Score=314.18 Aligned_cols=209 Identities=25% Similarity=0.320 Sum_probs=165.5
Q ss_pred ccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeee------eEEEEcCccCC---hhcccceEEEEc
Q 001400 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIE------GDIYISGYPKR---QETFARISGYCE 908 (1085)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~------G~i~i~g~~~~---~~~~~~~~gy~~ 908 (1085)
.+++..+|+|+||++.+||+++|+|+||||||||+++|+|... +.+ |++.++|.+.. ...+++.++|++
T Consensus 19 ~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~--~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~~~~ 96 (257)
T PRK14246 19 YINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIE--IYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVGMVF 96 (257)
T ss_pred ecCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCcCceeEcCEEEECCcccccCCHHHHhcceEEEc
Confidence 3456779999999999999999999999999999999999755 234 55555555542 223567799999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001400 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1085)
Q Consensus 909 Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p 987 (1085)
|++.+++.+|++||+.+....... ....+..+.++++++.+++.+.. +.... .+..||+|||||++|||||+.+|
T Consensus 97 q~~~~~~~~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~LS~G~~qrl~laral~~~P 172 (257)
T PRK14246 97 QQPNPFPHLSIYDNIAYPLKSHGI--KEKREIKKIVEECLRKVGLWKEVYDRLNS--PASQLSGGQQQRLTIARALALKP 172 (257)
T ss_pred cCCccCCCCcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCCccchhhhcC--CcccCCHHHHHHHHHHHHHHcCC
Confidence 999998999999999876432111 11233345678889998885321 11111 13579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 988 ~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.||++++|++ |+++..|+..
T Consensus 173 ~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~-g~i~~~g~~~ 237 (257)
T PRK14246 173 KVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN-GELVEWGSSN 237 (257)
T ss_pred CEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 99999999999999999999999999864 799999999986 46688999999985 7898888754
No 452
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-34 Score=315.77 Aligned_cols=200 Identities=27% Similarity=0.382 Sum_probs=155.0
Q ss_pred EEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCCCCH
Q 001400 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTV 919 (1085)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~tv 919 (1085)
.+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|+
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 68999999999999999999999999999999999876 468999999986532 334667999999988776 699
Q ss_pred HHHHHHhhhhcCCCcccHHHHHHHHHHHHHHc--CCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELV--ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 920 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
+||+.+..................+++.++.+ ++....+.. +..||+|||||++|||||+.+|++|+|||||+
T Consensus 93 ~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllLDEP~~ 167 (234)
T cd03251 93 AENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILILDEATS 167 (234)
T ss_pred HHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 99998753211000000000011223444443 333333322 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|||+.++..+.+.|+++. ++.|||++||+++ ++ +.||++++|++ |+++..|+.
T Consensus 168 ~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 168 ALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred cCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 999999999999999986 5899999999986 35 45999999986 688887764
No 453
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.2e-34 Score=311.03 Aligned_cols=206 Identities=27% Similarity=0.397 Sum_probs=171.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1085)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999998776 9999999988754332 4679999999988888999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.+.....+... . .....++++++.++|....++.+ +.
T Consensus 90 ~enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHPK--A--------------------------------KIKARVEELLELVQLEGLGDRYP-----NQ 130 (237)
T ss_pred HHHHHhHHHhcCCCH--H--------------------------------HHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 999987643221100 0 00123677888999976666554 46
Q ss_pred CchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCeE
Q 001400 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~i 386 (1085)
||||||||++||++|+.+|++++|||||+|||..+...+.+.|++++... +.+++.++|...++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~-~~tvli~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEV-HVTTVFVTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHhhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999886532 34555577888889999999999999999
Q ss_pred EEecChhhHH
Q 001400 387 VYQGPRVSVL 396 (1085)
Q Consensus 387 v~~G~~~~~~ 396 (1085)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999987764
No 454
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.3e-34 Score=314.41 Aligned_cols=205 Identities=26% Similarity=0.295 Sum_probs=163.6
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCcc-----CCh---h----cccceEEE
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP-----KRQ---E----TFARISGY 906 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~-----~~~---~----~~~~~~gy 906 (1085)
+++..+|+|+||+|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+ +.. . ..++.++|
T Consensus 13 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 90 (253)
T TIGR02323 13 YGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGAELELYQLSEAERRRLMRTEWGF 90 (253)
T ss_pred eCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccccccccccCCHHHHHHhhhcceEE
Confidence 344568999999999999999999999999999999999876 468999999976 321 1 12356899
Q ss_pred EccCCC--CCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHH
Q 001400 907 CEQNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVEL 983 (1085)
Q Consensus 907 ~~Q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL 983 (1085)
++|++. ..+..|+.+|+.+....... .........++++++.+++.+ ..+.. +..||+|||||++|||||
T Consensus 91 ~~q~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~l~~l~l~~~~~~~~-----~~~LSgG~~qrv~laral 163 (253)
T TIGR02323 91 VHQNPRDGLRMRVSAGANIGERLMAIGA--RHYGNIRAAAHDWLEEVEIDPTRIDDL-----PRAFSGGMQQRLQIARNL 163 (253)
T ss_pred EEeCcccccCccccHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHcCCChhhhhcC-----chhcCHHHHHHHHHHHHH
Confidence 999875 34567899998654211110 011123356788899999863 44443 357999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 984 VANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 984 ~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
+.+|++|||||||+|||+.++..+++.|+++.++ |.|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 164 VTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLLVMQQ-GRVVESGLT 233 (253)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEECCH
Confidence 9999999999999999999999999999998654 899999999986 46678999999985 788888874
No 455
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=316.15 Aligned_cols=209 Identities=20% Similarity=0.285 Sum_probs=164.2
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCC--ceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
..+|+|+|++|++|++++|+|||||||||||++|+|.+++.. +.+|+|.++|.++... ..++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 359999999999999999999999999999999999876311 2499999999876421 123569999999987
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++ .||+||+.+.+...+.. + + ....++.+++.+++....+...
T Consensus 106 ~~-~tv~enl~~~~~~~~~~---~---~-----------------------------~~~~~~~~l~~~~l~~~l~~~~- 148 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYT---G---D-----------------------------MDELVERSLRKAAVWDECKDKL- 148 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCc---H---H-----------------------------HHHHHHHHHHHhCCcchhhhhh-
Confidence 87 59999998865432110 0 0 0112455667776642111111
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+..+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ + ++|+.++|+..++.++||++++
T Consensus 149 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~i~~ 225 (269)
T PRK14259 149 NESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--N-FTIVIVTHNMQQAVRVSDMTAF 225 (269)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCEEEE
Confidence 234467999999999999999999999999999999999999999999998853 3 5566688999999999999999
Q ss_pred ecC-----------CeEEEecChhhHH
Q 001400 381 LSE-----------GQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~-----------G~iv~~G~~~~~~ 396 (1085)
|++ |++++.|+++++.
T Consensus 226 l~~~~~~~~~~g~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 226 FNAEEVEGGSGGKVGYLVEFNETKKIF 252 (269)
T ss_pred EeccccccccccccceEEEeCCHHHHH
Confidence 996 6789999988874
No 456
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=315.86 Aligned_cols=212 Identities=21% Similarity=0.296 Sum_probs=167.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
..+|+|+|+.|+||++++|+|||||||||||++|+|.+++. .+.+|+|+++|.++... ..++.++|++|++..
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 35999999999999999999999999999999999998641 12489999999887531 124579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++. ||.||+.|+....+.... .. .....++++++.+||.+......
T Consensus 112 ~~~-tv~enl~~~~~~~~~~~~------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~- 157 (267)
T PRK14235 112 FPK-SIYENVAYGPRIHGLARS------------------KA--------------ELDEIVETSLRKAGLWEEVKDRL- 157 (267)
T ss_pred CCC-cHHHHHHHHHHhcccccc------------------hH--------------HHHHHHHHHHHHcCCchhhhHHh-
Confidence 774 999999886533211000 00 00123677888899864211111
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+..++.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++..++|++++
T Consensus 158 ~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v~~ 234 (267)
T PRK14235 158 HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRTAF 234 (267)
T ss_pred hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEEEE
Confidence 233457999999999999999999999999999999999999999999999854 3 4566678888999999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|+++.+|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 235 FHLGNLVEVGDTEKMF 250 (267)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999887663
No 457
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.8e-34 Score=310.78 Aligned_cols=195 Identities=27% Similarity=0.436 Sum_probs=157.7
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
..+|+|+||+|++|++++|+||||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 469999999999999999999999999999999999865 468999999987532 234567999999988776 69
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccC------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIG------LPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~------~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+.||+.+.... .. ...+.++++.+++.+..+.... ...+..||||||||++|||||+.+|++|+|
T Consensus 94 v~e~l~~~~~~-----~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llll 164 (220)
T cd03245 94 LRDNITLGAPL-----AD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLL 164 (220)
T ss_pred HHHHhhcCCCC-----CC----HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999764211 11 1234567777787665544321 012357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEec
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g 1052 (1085)
||||+|||+.++..+++.|+++++ +.|||++||+++. .+.+|++++|++ |++++.|
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~--~~~~d~v~~l~~-g~i~~~~ 220 (220)
T cd03245 165 DEPTSAMDMNSEERLKERLRQLLG-DKTLIIITHRPSL--LDLVDRIIVMDS-GRIVADG 220 (220)
T ss_pred eCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHH--HHhCCEEEEEeC-CeEeecC
Confidence 999999999999999999999865 4899999999863 478999999985 6777643
No 458
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=315.03 Aligned_cols=210 Identities=20% Similarity=0.310 Sum_probs=166.2
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCC--CCceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++ ..+.+|+|+++|.++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 599999999999999999999999999999999999863 222489999999987421 1245799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+. ||+||+.|.....+.... .+...+++.+++.+||.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 999999876432211000 000123566788888853211111 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
...+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+.+++.+++|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--K-YTIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEEcCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999999853 3 45666778888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999988763
No 459
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-34 Score=312.69 Aligned_cols=209 Identities=24% Similarity=0.313 Sum_probs=166.0
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCC--C-CeeeeEEEEcCccCCh-----hcccceEEEEccCC
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gy~~Q~~ 911 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|.++.. ...++.++|++|++
T Consensus 14 ~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 93 (250)
T PRK14266 14 DDAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVELRKKVGMVFQKP 93 (250)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHHhhheEEEecCC
Confidence 44679999999999999999999999999999999999642 1 1358999999987642 23466799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 912 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
.+++. |+.||+.+....... .......+.+.++++.+++.+........ .+..||+|||||++|||||+.+|+||+
T Consensus 94 ~~~~~-t~~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~~LS~Gq~qrv~laral~~~p~lll 169 (250)
T PRK14266 94 NPFPK-SIFDNVAYGLRIHGE--DDEDFIEERVEESLKAAALWDEVKDKLDK-SALGLSGGQQQRLCIARTIAVSPEVIL 169 (250)
T ss_pred ccCcc-hHHHHHHhHHhhcCC--CCHHHHHHHHHHHHHHcCCchhHHHHHhC-CcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 88875 999999875422211 11222345677888888875321111111 235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
|||||+|||+.++..+.+.|++++ ++.|||++||+++ ++...+|++++|++ |++++.|+..
T Consensus 170 lDEP~~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~-~~~~~~~~i~~l~~-G~i~~~g~~~ 230 (250)
T PRK14266 170 MDEPCSALDPISTTKIEDLIHKLK-EDYTIVIVTHNMQ-QATRVSKYTSFFLN-GEIIESGLTD 230 (250)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEECCHH-HHHhhcCEEEEEEC-CeEEEeCCHH
Confidence 999999999999999999999985 4899999999986 57888999999975 7898888753
No 460
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.8e-34 Score=318.17 Aligned_cols=197 Identities=21% Similarity=0.295 Sum_probs=162.0
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
..+|+||||+|++||+++|+|+||||||||+++|+|... .+|+|+++|.++.. ...++.++|++|++.+++. |
T Consensus 17 ~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~~-t 92 (275)
T cd03289 17 NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFSG-T 92 (275)
T ss_pred CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEhhhCCHHHHhhhEEEECCCcccchh-h
Confidence 458999999999999999999999999999999999864 37999999987642 3456789999999998875 9
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCC------CCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGL------PGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~------~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
+++|+..... .. .+.++++++.+++.+..+..... .+...||+|||||++|||||+.+|+||+|
T Consensus 93 v~~nl~~~~~------~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~illl 162 (275)
T cd03289 93 FRKNLDPYGK------WS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLL 162 (275)
T ss_pred HHHHhhhccC------CC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999953210 11 13467788888887655443221 12346999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~ 1056 (1085)
||||++||+.+...+++.|+++. .++|||+|||+++ ....||++++|++ |++++.|+..+
T Consensus 163 DEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G~i~~~g~~~~ 222 (275)
T cd03289 163 DEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-NKVRQYDSIQK 222 (275)
T ss_pred ECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-CeEeecCCHHH
Confidence 99999999999999999999874 5899999999985 3356999999985 78999987644
No 461
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-34 Score=314.47 Aligned_cols=211 Identities=23% Similarity=0.316 Sum_probs=167.6
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCC--ceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
.+|+|+|+.|++|++++|+|||||||||||++|+|.+.|.. +.+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 59999999999999999999999999999999999986421 2499999999876421 1245799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+.+||+||+.++....+.... ......++.+++.+||........ +
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRL-D 143 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 999999999876432210000 001123677788888842111111 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+..++.+++|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~i~~l 220 (258)
T PRK14241 144 KPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQTAFF 220 (258)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999853 3 45666888899999999999999
Q ss_pred c------CCeEEEecChhhHH
Q 001400 382 S------EGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~------~G~iv~~G~~~~~~ 396 (1085)
+ +|++++.|+.+++.
T Consensus 221 ~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 221 NLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred ecccCCCCceEEecCCHHHHH
Confidence 7 79999999987764
No 462
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.8e-32 Score=343.40 Aligned_cols=211 Identities=28% Similarity=0.473 Sum_probs=173.4
Q ss_pred eeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC
Q 001400 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1085)
Q Consensus 816 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 895 (1085)
.+.++|++|.++. .+..+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 463 ~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~l 529 (694)
T TIGR03375 463 EIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVDI 529 (694)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEh
Confidence 5778888877631 23469999999999999999999999999999999999876 5689999999986
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------ccccCCCC
Q 001400 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1085)
Q Consensus 896 ~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~ 965 (1085)
++ ..+++.++||+|++.++.+ |++||+.++. + +.+ ++.++++++..++.+.. +..++..
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~~-TI~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~- 598 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFYG-TLRDNIALGA----P-YAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGER- 598 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhhh-hHHHHHhCCC----C-CCC----HHHHHHHHHHcChHHHHHhCcccccceecCC-
Confidence 53 4678899999999998865 9999998652 1 111 23456777777665432 3333333
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 966 ~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
+.+||||||||++|||||+++|+||+||||||+||+++++.+++.|+++. +++|+|++||+++ ..+.||++++|++
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~- 674 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN- 674 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 35799999999999999999999999999999999999999999999975 5899999999986 5678999999985
Q ss_pred cEEEEecCC
Q 001400 1046 GELIYAGPL 1054 (1085)
Q Consensus 1046 G~~~~~g~~ 1054 (1085)
|++++.|+-
T Consensus 675 G~i~e~G~~ 683 (694)
T TIGR03375 675 GRIVADGPK 683 (694)
T ss_pred CEEEeeCCH
Confidence 789988873
No 463
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.3e-34 Score=354.75 Aligned_cols=211 Identities=27% Similarity=0.426 Sum_probs=173.1
Q ss_pred ceeeeccceeeeeccccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCcc
Q 001400 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1085)
Q Consensus 815 ~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 894 (1085)
..+.|+|++|.++. ++++|+|+||+++|||++||+||||||||||+++|.|... +.+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCEe
Confidence 34777887776631 5679999999999999999999999999999999999876 468999999988
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-------ccccccCCC
Q 001400 895 KRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGLP 964 (1085)
Q Consensus 895 ~~~---~~~~~~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~ 964 (1085)
+++ ...++.++||+|++.++. -|++||+.++.. +.. ++.++++++..++.+ -.|..+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~-----~at----~eei~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRP-----DAT----DEEIEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccceecCC
Confidence 653 567889999999999987 699999998631 111 123455555444332 345555533
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEec
Q 001400 965 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1085)
Q Consensus 965 ~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~ 1044 (1085)
+..||||||||++||||++++|+||+||||||+||+++...|++.++++. +++|+|+++|+++ ..+.+|+|++|++
T Consensus 463 -G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 463 -GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999876 6789999999986 4566999999985
Q ss_pred CcEEEEecCC
Q 001400 1045 GGELIYAGPL 1054 (1085)
Q Consensus 1045 gG~~~~~g~~ 1054 (1085)
|++++.|+-
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 689999875
No 464
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-34 Score=274.26 Aligned_cols=212 Identities=25% Similarity=0.354 Sum_probs=178.3
Q ss_pred ccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccC--C----h---hcccc
Q 001400 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK--R----Q---ETFAR 902 (1085)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~--~----~---~~~~~ 902 (1085)
+++.+..|+..++|-||+++...||.+.|+||||||||||+++|.-... +.+|+..|-|... + . ...++
T Consensus 5 v~~in~~yg~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~--p~sg~l~ia~~~fd~s~~~~~k~i~~lr~ 82 (242)
T COG4161 5 LNGINCFYGAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFDFSKTPSDKAIRDLRR 82 (242)
T ss_pred EcccccccccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhC--CCCCeEEecccccccccCccHHHHHHHHH
Confidence 3444455677899999999999999999999999999999999986554 4589988877431 1 1 24677
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHH
Q 001400 903 ISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVE 982 (1085)
Q Consensus 903 ~~gy~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~a 982 (1085)
.+|+|+|+-.++|.+||.|||.-... +. ...++++.+....++++.+.|.+++|... -.|||||+||++||||
T Consensus 83 ~vgmvfqqy~lwphltv~enlieap~-kv-~gl~~~qa~~~a~ellkrlrl~~~adr~p-----lhlsggqqqrvaiara 155 (242)
T COG4161 83 NVGMVFQQYNLWPHLTVQENLIEAPC-RV-LGLSKDQALARAEKLLKRLRLKPYADRYP-----LHLSGGQQQRVAIARA 155 (242)
T ss_pred hhhhhhhhhccCchhHHHHHHHhhhH-HH-hCCCHHHHHHHHHHHHHHhccccccccCc-----eecccchhhhHHHHHH
Confidence 89999999999999999999965432 21 23455666777889999999999998753 3699999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 983 LVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 983 L~~~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|+.+|++|++||||++|||+-...+.++|+++...|.|-+++||..+. ..+.+.+++.|.+ |+++..|+-
T Consensus 156 lmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~v-a~k~as~vvyme~-g~ive~g~a 225 (242)
T COG4161 156 LMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEV-ARKTASRVVYMEN-GHIVEQGDA 225 (242)
T ss_pred HhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhH-HHhhhhheEeeec-CeeEeecch
Confidence 999999999999999999999999999999999999999999998764 5567899999985 789998864
No 465
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=313.21 Aligned_cols=212 Identities=21% Similarity=0.298 Sum_probs=167.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhC--CCCceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
+++|+|+|+.|++|++++|+||||||||||+++|+|... +..+.+|+|+++|.++... ..++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999875 2213589999999876432 124579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++. ||+||+.+.....+.....+ .....++++++.+||.+...+.+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~- 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNKK--------------------------------KLDEIVEKSLTSVGLWEELGDRL- 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCHH--------------------------------HHHHHHHHHHHHcCCCchhhhHh-
Confidence 875 99999987633221100000 00123667888999865322222
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|...++.+++|+|++
T Consensus 144 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 144 KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK--N-FTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhcCEEEE
Confidence 234567999999999999999999999999999999999999999999998843 3 5566688888999999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|++++.|+.+++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999987663
No 466
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=311.57 Aligned_cols=210 Identities=20% Similarity=0.261 Sum_probs=163.7
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhC--CCCceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++ +..+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 114 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNPF 114 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCccC
Confidence 59999999999999999999999999999999999764 2113489999999887532 1245799999999878
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+. ||+||+.+.....+.. ... ..+..+..+++.+++........ +
T Consensus 115 ~~-tv~enl~~~~~~~~~~--~~~-------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 159 (268)
T PRK14248 115 PK-SIYNNITHALKYAGER--RKS-------------------------------VLDEIVEESLTKAALWDEVKDRL-H 159 (268)
T ss_pred cc-cHHHHHHHHHHhcCCC--cHH-------------------------------HHHHHHHHHHHHcCCCcchHHHH-h
Confidence 75 9999998754321100 000 00112455677777742111111 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|+|++|
T Consensus 160 ~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v~~l 236 (268)
T PRK14248 160 SSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRTAFF 236 (268)
T ss_pred cCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999999854 3 45666788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 237 ~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 237 LNGDLVEYDQTEQIF 251 (268)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 467
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.2e-34 Score=311.39 Aligned_cols=205 Identities=26% Similarity=0.392 Sum_probs=158.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1085)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-R 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-c
Confidence 45999999999999999999999999999999999999876 999999998765332 2457999999987664 7
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHh--CCcccccccccCc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL--GLDTCADTLVGDE 302 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 302 (1085)
||+||+.+... . ...+...+.. + ....+..++.+ |++...+ .
T Consensus 91 tv~~nl~~~~~--~--~~~~~~~~~~------------------~---------~~~~~~~l~~l~~~~~~~~~-----~ 134 (237)
T cd03252 91 SIRDNIALADP--G--MSMERVIEAA------------------K---------LAGAHDFISELPEGYDTIVG-----E 134 (237)
T ss_pred hHHHHhhccCC--C--CCHHHHHHHH------------------H---------HcCcHHHHHhCcccccchhh-----c
Confidence 99999987431 1 0000000000 0 00123344444 4443333 3
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++ ..+|++++|+
T Consensus 135 ~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~-~~~d~v~~l~ 210 (237)
T cd03252 135 QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA--G-RTVIIIAHRLSTV-KNADRIIVME 210 (237)
T ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC--C-CEEEEEeCCHHHH-HhCCEEEEEE
Confidence 4467999999999999999999999999999999999999999999998852 4 4555577777777 4699999999
Q ss_pred CCeEEEecChhhHH
Q 001400 383 EGQIVYQGPRVSVL 396 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1085)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (237)
T cd03252 211 KGRIVEQGSHDELL 224 (237)
T ss_pred CCEEEEEcCHHHHH
Confidence 99999999987764
No 468
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=7.9e-34 Score=311.50 Aligned_cols=210 Identities=24% Similarity=0.312 Sum_probs=161.4
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hc-ccceEEEEccCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ET-FARISGYCEQNDIHS 914 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~-~~~~~gy~~Q~~~~~ 914 (1085)
+++..+|+|+||+|++|++++|+|+||||||||+++|+|.....+.+|+|.++|.++.. .. .++.++|++|++.++
T Consensus 11 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (248)
T PRK09580 11 VEDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGIFMAFQYPVEI 90 (248)
T ss_pred eCCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcceEEEecCchhc
Confidence 34457999999999999999999999999999999999974211568999999987542 11 235699999998888
Q ss_pred CCCCHHHHHHHhhh-hcC--CCc-ccHHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 915 PGLTVLESLLFSAW-LRL--PSE-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 915 ~~~tv~e~l~~~~~-~~~--~~~-~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
+.+|+.+++.+... ++. ... .......+.++++++.+++. +..+... ...||+|||||++|||||+.+|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~~LS~G~~qrv~laral~~~p~i 166 (248)
T PRK09580 91 PGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NVGFSGGEKKRNDILQMAVLEPEL 166 (248)
T ss_pred cchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CCCCCHHHHHHHHHHHHHHcCCCE
Confidence 87777766543211 110 000 11112245567788888884 3333322 126999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHh-cCEEEEEecCcEEEEecCC
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~il~l~~gG~~~~~g~~ 1054 (1085)
|+|||||+|||+.++..+.+.|+++.+.|+|||++||+++. +... +|++++|+ +|++++.|+.
T Consensus 167 llLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~i~~l~-~g~i~~~g~~ 230 (248)
T PRK09580 167 CILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDYVHVLY-QGRIVKSGDF 230 (248)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCEEEEEE-CCeEEEeCCH
Confidence 99999999999999999999999987778999999999763 4444 79999997 4788888864
No 469
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.6e-34 Score=302.91 Aligned_cols=186 Identities=25% Similarity=0.304 Sum_probs=154.5
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~ 916 (1085)
+++..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.
T Consensus 10 ~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 87 (198)
T TIGR01189 10 RGERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPE 87 (198)
T ss_pred ECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccC
Confidence 345679999999999999999999999999999999999865 468999999987532 2345679999999888888
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
+|+.||+.+....+.. . .+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||
T Consensus 88 ~tv~~~l~~~~~~~~~-----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt 155 (198)
T TIGR01189 88 LSALENLHFWAAIHGG-----A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPT 155 (198)
T ss_pred CcHHHHHHHHHHHcCC-----c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999875432211 1 234678899999877655443 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEE
Q 001400 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLF 1041 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~ 1041 (1085)
+|||+.++..+++.|+++.++|.|||++||++. ++ .+++++.
T Consensus 156 ~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~--~~~~~~~ 197 (198)
T TIGR01189 156 TALDKAGVALLAGLLRAHLARGGIVLLTTHQDL-GL--VEARELR 197 (198)
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc-cc--cceEEee
Confidence 999999999999999998777999999999974 22 3466543
No 470
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-35 Score=320.84 Aligned_cols=210 Identities=24% Similarity=0.384 Sum_probs=171.6
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC---CCCceEEEEccCCCCCC
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF---VPPRTSAYVSQQDWQVA 222 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~---~~~~~~~yv~Q~d~~~~ 222 (1085)
+.+++|+||||++.||+.+|++||||+||||+++.|-...+-. +|.|+++|+++... ..++.||.||||..+|.
T Consensus 549 p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFN 625 (790)
T KOG0056|consen 549 PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFN 625 (790)
T ss_pred CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceeec
Confidence 3457999999999999999999999999999999999988765 99999999998654 34678999999999777
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCc
Q 001400 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1085)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1085)
+ |+..||.|+-. +..-+.+.+++ |++ ...| +++++++.++|+||++
T Consensus 626 d-TI~yNIryak~----~AsneevyaAA------------------kAA--------~IHd---rIl~fPegY~t~VGER 671 (790)
T KOG0056|consen 626 D-TILYNIRYAKP----SASNEEVYAAA------------------KAA--------QIHD---RILQFPEGYNTRVGER 671 (790)
T ss_pred c-eeeeheeecCC----CCChHHHHHHH------------------HHh--------hHHH---HHhcCchhhhhhhhhc
Confidence 6 99999988631 11111111111 110 1122 3688999999999998
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
+.+ |||||||||+|||+++..|.+++|||.||+||..+..+|..+|.+++. ++|+|+.. |..+ +.--+|.|++++
T Consensus 672 GLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvA-HRLS-TivnAD~ILvi~ 746 (790)
T KOG0056|consen 672 GLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVA-HRLS-TIVNADLILVIS 746 (790)
T ss_pred ccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe-eeeh-heecccEEEEEe
Confidence 886 999999999999999999999999999999999999999999999985 57777744 4333 344679999999
Q ss_pred CCeEEEecChhhHHH
Q 001400 383 EGQIVYQGPRVSVLD 397 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1085)
+|+|++.|.+++++.
T Consensus 747 ~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 747 NGRIVERGRHEELLK 761 (790)
T ss_pred CCeEeecCcHHHHHh
Confidence 999999999999874
No 471
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.5e-34 Score=360.95 Aligned_cols=207 Identities=27% Similarity=0.366 Sum_probs=165.1
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1085)
++|+|+|++|+||+.++|+||||||||||+++|+|+++|. +|+|++||.++.+... ++.++||+|++.+|+ .|
T Consensus 488 ~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gT 563 (708)
T TIGR01193 488 NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-GS 563 (708)
T ss_pred cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-HH
Confidence 5999999999999999999999999999999999999886 9999999998876643 578999999998776 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+|||.++.+. ....+.+.+++ +.+. .++.+ ..|+...||.||+. ..
T Consensus 564 I~eNi~l~~~~---~~~~~~i~~a~------------------~~a~---------l~~~i--~~lp~gldt~i~e~-G~ 610 (708)
T TIGR01193 564 ILENLLLGAKE---NVSQDEIWAAC------------------EIAE---------IKDDI--ENMPLGYQTELSEE-GS 610 (708)
T ss_pred HHHHHhccCCC---CCCHHHHHHHH------------------HHhC---------CHHHH--HhcccccCcEecCC-CC
Confidence 99999875211 00011111111 0000 11111 24677889999974 46
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
+||||||||++||||++.+|++|+||||||+||+.+...+.+.|+++ .++|+|+ ++|..+ +...+|+|++|++|+
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~Ii-itHr~~-~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIF-VAHRLS-VAKQSDKIIVLDHGK 685 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEE-EecchH-HHHcCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999874 2455544 556554 567899999999999
Q ss_pred EEEecChhhHHH
Q 001400 386 IVYQGPRVSVLD 397 (1085)
Q Consensus 386 iv~~G~~~~~~~ 397 (1085)
+++.|+++++++
T Consensus 686 i~~~G~~~~L~~ 697 (708)
T TIGR01193 686 IIEQGSHDELLD 697 (708)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 472
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=5.8e-34 Score=306.83 Aligned_cols=211 Identities=24% Similarity=0.334 Sum_probs=167.8
Q ss_pred EEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCC--CCCCHHHHHHHhh
Q 001400 850 GAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGLTVLESLLFSA 927 (1085)
Q Consensus 850 ~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~--~~~tv~e~l~~~~ 927 (1085)
|+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... .++.++|++|++.++ ...|+.||+.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIP--PAKGTVKVAGASPGK--GWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccchH--hhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 4688999999999999999999999999866 468999999987532 356799999998664 3479999998753
Q ss_pred hhcC-CCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHH
Q 001400 928 WLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAI 1006 (1085)
Q Consensus 928 ~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~~~~~~ 1006 (1085)
.... ............+.++++.+++.+..+..+ .+||+|||||++|||||+.+|++|||||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPV-----GELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 2110 000011223345788999999976665543 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCC--chHHHHHHHHhccccc
Q 001400 1007 VMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS--KSCELIKYFEVESFMF 1072 (1085)
Q Consensus 1007 i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~--~~~~~~~~~~~~~g~~ 1072 (1085)
+.+.|+++.++|.|||++||+++ ++.+.+|+++++ + |++++.|+..+ .++.+.+.|...||-|
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQQLQDPAPWMTTFGVSDSSP 216 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHHHhcChHHHHHHhCCCCcch
Confidence 99999998777999999999986 477889999998 5 79999887654 3455666676555554
No 473
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=312.65 Aligned_cols=213 Identities=27% Similarity=0.372 Sum_probs=169.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC-----CceeeEEEECCccCCCCC---CCceEEEEccCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-----LQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW 219 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-----~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~ 219 (1085)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.+++. ...+|+|.++|.++.... .++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 36999999999999999999999999999999999998763 012899999998875432 2346899999987
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccc
Q 001400 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1085)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1085)
.++.+||+||+.++...... ... ... ......++.+++.+||+...++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~~~-------------~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--RAG-------------ALT---------------HRDGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhccccccc--ccc-------------cCC---------------HHHHHHHHHHHHHcCcHhhhcCCc
Confidence 66679999999875311000 000 000 001224678899999987655544
Q ss_pred cCcccccCchhhhhHHHHHHHHh---------CCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhH
Q 001400 300 GDEMLKGISGGQKKRLTTGELLV---------GPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 370 (1085)
Q Consensus 300 g~~~~~~LSGGqkqRvsia~al~---------~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 370 (1085)
..|||||||||+||+||+ .+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.++
T Consensus 144 -----~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tviiisH~~~~ 217 (272)
T PRK13547 144 -----TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDW-NLGVLAIVHDPNL 217 (272)
T ss_pred -----ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHH
Confidence 569999999999999999 5999999999999999999999999999987533 4556667888889
Q ss_pred HHhhcCeEEEecCCeEEEecChhhHH
Q 001400 371 AYELFDDVILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 371 ~~~~~D~ii~L~~G~iv~~G~~~~~~ 396 (1085)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 99999999999999999999987663
No 474
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=4e-34 Score=298.22 Aligned_cols=159 Identities=25% Similarity=0.457 Sum_probs=141.4
Q ss_pred EeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEEEEccCC---CCCCC
Q 001400 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPG 916 (1085)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy~~Q~~---~~~~~ 916 (1085)
+|+++||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++ .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 8999999999999999999999999999999999876 468999999987643 23456799999985 46788
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
.|++||+.+... ||+|||||++|||||+.+|++|||||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999875310 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecC
Q 001400 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~g 1045 (1085)
+|||+.++..+++.++++.++|+|||++||+++ ++.+.+|++++|++|
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~G 180 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYEG 180 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecCC
Confidence 999999999999999998777899999999986 577889999999864
No 475
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=309.94 Aligned_cols=211 Identities=22% Similarity=0.323 Sum_probs=165.8
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCC--CCceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
+++|+|+|+.|++||+++|+||||||||||+++|+|.+++ ..+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14251 17 YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTP 96 (251)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCcc
Confidence 3599999999999999999999999999999999999862 113599999999876431 124579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++ .||+||+.++....+.... + ..+..++++++.+||........
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~--------------------~-------------~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14251 97 FP-FSVYDNVAYGLKIAGVKDK--------------------E-------------LIDQRVEESLKQAAIWKETKDNL- 141 (251)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH--------------------H-------------HHHHHHHHHHHHcCCCcchHHHh-
Confidence 75 7999999875432211000 0 00123566778888842110001
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+....+||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++.+ + ++|+.++|..+++.+++|+|++
T Consensus 142 ~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiiiisH~~~~~~~~~d~i~~ 218 (251)
T PRK14251 142 DRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH--Q-YTFIMVTHNLQQAGRISDQTAF 218 (251)
T ss_pred ccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc--C-CeEEEEECCHHHHHhhcCEEEE
Confidence 234467999999999999999999999999999999999999999999998853 3 5666688899999999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|+++..|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 219 LMNGDLIEAGPTEEMF 234 (251)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999987763
No 476
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=314.05 Aligned_cols=211 Identities=23% Similarity=0.304 Sum_probs=168.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCC----CCCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~----~~~~~~~yv~Q~d~~~ 221 (1085)
+++|+|+|+.|++|++++|+|||||||||||++|+|.++|. .+.+|+|.++|.++.+. ..++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 46999999999999999999999999999999999998751 12499999999887543 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+ +||+||+.++........ .. +....+..+++.+||....++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~-------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKLVP-------------------RK--------------EFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccCCC-------------------HH--------------HHHHHHHHHHHHcCCCchhhhHh-h
Confidence 7 899999987543211000 00 00113566788888865432222 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998864 3 46666889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988774
No 477
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=5.8e-34 Score=311.55 Aligned_cols=198 Identities=24% Similarity=0.352 Sum_probs=161.9
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCC--C
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPG--L 917 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~--~ 917 (1085)
++..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|. +.++|++|++.+++. .
T Consensus 15 ~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~l~~ 84 (251)
T PRK09544 15 GQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK--------LRIGYVPQKLYLDTTLPL 84 (251)
T ss_pred CCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc--------cCEEEeccccccccccCh
Confidence 34579999999999999999999999999999999999866 46899999872 358999999877665 4
Q ss_pred CHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Q 001400 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1085)
Q Consensus 918 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPts 997 (1085)
|+.+++.+.. ... .+.+.++++.+++.+..+... ..||+|||||++|||||+.+|++|||||||+
T Consensus 85 ~~~~~~~~~~------~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDEPt~ 149 (251)
T PRK09544 85 TVNRFLRLRP------GTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGETQRVLLARALLNRPQLLVLDEPTQ 149 (251)
T ss_pred hHHHHHhccc------ccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 7788765321 111 234678899999887666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCc--hHHHHHHH
Q 001400 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK--SCELIKYF 1065 (1085)
Q Consensus 998 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~--~~~~~~~~ 1065 (1085)
|||+.++..+++.|+++.++ |.|||++||+++ ++.+.+|++++|+ + +++..|+..+. ...+.++|
T Consensus 150 ~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g~~~~~~~~~~~~~~~ 217 (251)
T PRK09544 150 GVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSGTPEVVSLHPEFISMF 217 (251)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeCCHHHHhCCHHHHHHh
Confidence 99999999999999998765 899999999986 4778899999995 4 58888875431 23455566
No 478
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=327.31 Aligned_cols=209 Identities=19% Similarity=0.277 Sum_probs=167.5
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv~e 921 (1085)
+.+|+||||+|++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+. ++.+.+.+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 469999999999999999999999999999999999876 4689999999641 1222344567789999
Q ss_pred HHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCH
Q 001400 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1085)
Q Consensus 922 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgLD~ 1001 (1085)
|+.+...... .......+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|||||||+|||+
T Consensus 105 nL~l~~~~~~---~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMMG---LTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhcC---CCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 9987543221 122333455678899999877665543 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCchHHHHHHHHhccccc
Q 001400 1002 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEVESFMF 1072 (1085)
Q Consensus 1002 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~~~~~~~~~~~~~g~~ 1072 (1085)
.++..+++.|++++++|+|||++||+++ .+.+.||++++|.+ |++++.|+..+...+.-.|++..++.+
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~el~~~~~~~~~~~~~~~ 245 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIKEVVDHYDEFLKKYNQMS 245 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHHHHHhhHHHHHHHHhhcC
Confidence 9999999999998777999999999986 47788999999985 789988876543334445665554443
No 479
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.1e-33 Score=311.08 Aligned_cols=206 Identities=20% Similarity=0.243 Sum_probs=167.1
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCC-ceeeEEEECCccCCCCCC-CceEEEEccCCC--CCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-QVSGKITYNGHGFKEFVP-PRTSAYVSQQDW--QVAEM 224 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~i~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 224 (1085)
++|+|+|++|++|++++|+||||||||||+++|+|.+++.. +.+|+|.++|.++..... ++.++||+|++. +.+.+
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 58999999999999999999999999999999999987611 149999999988753322 357999999974 44668
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcc---cccccccC
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT---CADTLVGD 301 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vg~ 301 (1085)
|+.+++.+.+...+.. .....++++++.+||.+ ..++
T Consensus 97 ~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (254)
T PRK10418 97 TMHTHARETCLALGKP------------------------------------ADDATLTAALEAVGLENAARVLKL---- 136 (254)
T ss_pred cHHHHHHHHHHHcCCC------------------------------------hHHHHHHHHHHHcCCCChhhhhhc----
Confidence 9999986643221100 00123677888999975 2343
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
....|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|
T Consensus 137 -~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~til~~sH~~~~~~~~~d~v~~l 214 (254)
T PRK10418 137 -YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKR-ALGMLLVTHDMGVVARLADDVAVM 214 (254)
T ss_pred -CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhCCEEEEE
Confidence 345799999999999999999999999999999999999999999999987543 456666888889999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999987764
No 480
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.1e-34 Score=314.04 Aligned_cols=198 Identities=25% Similarity=0.279 Sum_probs=160.9
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1085)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++ . +|+|.++|.++.... .++.++||+|++.+|+ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 58999999999999999999999999999999999985 3 899999999875542 2467999999999887 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc-------cccccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-------TCADTL 298 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-------~~~dt~ 298 (1085)
|+||+.+... ...+ .+.+.++.+||. ...||.
T Consensus 93 v~~nl~~~~~-----~~~~------------------------------------~~~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGK-----WSDE------------------------------------EIWKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccC-----CCHH------------------------------------HHHHHHHHcCCHHHHHhCcccccce
Confidence 9999963211 0000 122233344443 345666
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
+++ ....||||||||++|||||+.+|+|++|||||++||+.+...+.+.|++..+ +++|++++|..+.+.. +|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~~---~~tii~isH~~~~i~~-~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFA---DCTVILSEHRIEAMLE-CQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhcC---CCEEEEEECCHHHHHh-CCEE
Confidence 765 4568999999999999999999999999999999999999999999997632 4556667788877754 9999
Q ss_pred EEecCCeEEEecChhhHHH
Q 001400 379 ILLSEGQIVYQGPRVSVLD 397 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~~ 397 (1085)
++|++|++++.|++++++.
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999864
No 481
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=312.20 Aligned_cols=208 Identities=25% Similarity=0.269 Sum_probs=164.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCC---eeeeEEEEcCccCC-------hhcccceEEEEcc
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-------QETFARISGYCEQ 909 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~~~~-------~~~~~~~~gy~~Q 909 (1085)
+++.+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.+.. ...+++.+||++|
T Consensus 27 ~~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q 106 (265)
T PRK14252 27 GGYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEVDPIEVRMRISMVFQ 106 (265)
T ss_pred CCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccccccCHHHHhccEEEEcc
Confidence 3457999999999999999999999999999999999975421 26899999987642 1234667999999
Q ss_pred CCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 001400 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1085)
Q Consensus 910 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ 988 (1085)
++.+++. |++||+.+....... . .....++.++++++.+++.+ +.+.... .+..||+|||||++|||||+.+|+
T Consensus 107 ~~~~~~~-tv~eni~~~~~~~~~-~-~~~~~~~~~~~~l~~~~l~~~l~~~~~~--~~~~LS~G~~qrv~laral~~~p~ 181 (265)
T PRK14252 107 KPNPFPK-SIFENVAYGLRIRGV-K-RRSILEERVENALRNAALWDEVKDRLGD--LAFNLSGGQQQRLCIARALATDPE 181 (265)
T ss_pred CCcCCcc-hHHHHHHhHHHHcCC-C-hHHHHHHHHHHHHHHcCCchhhhHHHhC--CcccCCHHHHHHHHHHHHHHcCCC
Confidence 9988876 999999876432211 0 11122345677788777642 1111111 135799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCC
Q 001400 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1085)
Q Consensus 989 illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~ 1055 (1085)
+|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 182 llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 245 (265)
T PRK14252 182 ILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAYMYM-GELIEFGATD 245 (265)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999999999865 799999999986 47788999999974 7888888753
No 482
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1e-33 Score=312.12 Aligned_cols=206 Identities=25% Similarity=0.349 Sum_probs=167.6
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCcc-----CCCCCC-------CceEEEEcc
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHG-----FKEFVP-------PRTSAYVSQ 216 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~-----~~~~~~-------~~~~~yv~Q 216 (1085)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 5999999999999999999999999999999999998876 9999999987 544321 346999999
Q ss_pred CCC--CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcc-
Q 001400 217 QDW--QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT- 293 (1085)
Q Consensus 217 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 293 (1085)
++. +++.+|+.||+.+.....+.. .+ + .....++++++.+|+..
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~------------------~--------------~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGAR-HY------------------G--------------DIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccC-cH------------------H--------------HHHHHHHHHHHHcCCChh
Confidence 973 577789999997642211000 00 0 00123677889999964
Q ss_pred cccccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHh
Q 001400 294 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 373 (1085)
Q Consensus 294 ~~dt~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 373 (1085)
..++.+ ..|||||||||+|||||+.+|++|+|||||+|||+.+...+.+.|+++.+.. +.+|+.++|+..++.+
T Consensus 144 ~~~~~~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDDLP-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVREL-GLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhCCC-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHH
Confidence 445443 5699999999999999999999999999999999999999999999886533 4566778899999999
Q ss_pred hcCeEEEecCCeEEEecChhhHH
Q 001400 374 LFDDVILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 374 ~~D~ii~L~~G~iv~~G~~~~~~ 396 (1085)
++|+|++|++|++++.|+++++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999987763
No 483
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3e-34 Score=312.78 Aligned_cols=196 Identities=28% Similarity=0.397 Sum_probs=153.7
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
..+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 469999999999999999999999999999999999865 468999999987532 234567999999987775 69
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccccc-------ccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGA-------LIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~ill 991 (1085)
++||+.+....+ ... ..++.++..++.+..+. ... ..+..||+|||||++|||||+.+|++|+
T Consensus 93 v~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999998753211 111 11222333332221111 111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 992 lDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.||++++|++ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999986 7999999999986 34 47999999986 688888774
No 484
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5e-34 Score=302.26 Aligned_cols=185 Identities=22% Similarity=0.281 Sum_probs=155.2
Q ss_pred cCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh--hcccceEEEEccCCCCCCC
Q 001400 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1085)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gy~~Q~~~~~~~ 916 (1085)
+++..+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|+++|.++.. ..+++.++|++|++.+++.
T Consensus 11 ~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 88 (200)
T PRK13540 11 YHDQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIKKDLCTYQKQLCFVGHRSGINPY 88 (200)
T ss_pred eCCeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccccCHHHHHhheEEeccccccCcC
Confidence 345679999999999999999999999999999999999876 568999999987642 3456789999999888889
Q ss_pred CCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Q 001400 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1085)
Q Consensus 917 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPt 996 (1085)
.||+||+.+.... .. . ...++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||
T Consensus 89 ~tv~~~~~~~~~~--~~----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~~lilDEP~ 155 (200)
T PRK13540 89 LTLRENCLYDIHF--SP----G--AVGITELCRLFSLEHLIDYPC-----GLLSSGQKRQVALLRLWMSKAKLWLLDEPL 155 (200)
T ss_pred CCHHHHHHHHHhc--Cc----c--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999876321 11 1 135678899988876555432 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEE
Q 001400 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL 1040 (1085)
Q Consensus 997 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il 1040 (1085)
+|||+.++..+.+.|+++.++|.|||++||+++ ....+|...
T Consensus 156 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 156 VALDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred cccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 999999999999999998777999999999975 445567544
No 485
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.4e-33 Score=297.02 Aligned_cols=170 Identities=38% Similarity=0.634 Sum_probs=147.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhh--CCCCceeeEEEECCccCCCCCCCceEEEEccCCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~i~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 225 (1085)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ ++. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 46999999999999999999999999999999999998 665 9999999998764334567999999998889999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999763110 0
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChh-HHHhhcCeEEEecCC
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP-EAYELFDDVILLSEG 384 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~-~~~~~~D~ii~L~~G 384 (1085)
.||||||||++|||||+.+|++++|||||+|||..++..+.+.|+++.+. +.|+|+ ++|+.+ ++.+++|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~-~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADT-GRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 49999999999999999999999999999999999999999999998653 445444 556654 788999999999999
Q ss_pred eEEEec
Q 001400 385 QIVYQG 390 (1085)
Q Consensus 385 ~iv~~G 390 (1085)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 486
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-34 Score=311.48 Aligned_cols=197 Identities=26% Similarity=0.380 Sum_probs=154.9
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gy~~Q~~~~~~~~t 918 (1085)
..+++|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++. |
T Consensus 16 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~-t 92 (229)
T cd03254 16 KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDIRDISRKSLRSMIGVVLQDTFLFSG-T 92 (229)
T ss_pred CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeHHHcCHHHHhhhEEEecCCchhhhh-H
Confidence 458999999999999999999999999999999999876 468999999987532 3456679999999887765 9
Q ss_pred HHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccc------CCCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q 001400 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALI------GLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1085)
Q Consensus 919 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~------~~~~~~~LS~Gqrqrl~iA~aL~~~p~illl 992 (1085)
++||+.+.... .. ...++++++.+++.+..+... ....+..||+|||||++|||||+.+|++|||
T Consensus 93 v~~~~~~~~~~-----~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~llll 163 (229)
T cd03254 93 IMENIRLGRPN-----AT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILIL 163 (229)
T ss_pred HHHHHhccCCC-----CC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999764211 01 112333444444433222110 0012457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCC
Q 001400 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1085)
Q Consensus 993 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~ 1054 (1085)
||||+|||+.++..+++.|+++. +|+|||++||+++. + +.+|++++|++ |++++.|+.
T Consensus 164 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~i~~l~~-g~~~~~~~~ 221 (229)
T cd03254 164 DEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLST-I-KNADKILVLDD-GKIIEEGTH 221 (229)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCEEEEEeC-CeEEEeCCH
Confidence 99999999999999999999985 58999999999863 4 56999999985 688887763
No 487
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-34 Score=304.49 Aligned_cols=192 Identities=27% Similarity=0.411 Sum_probs=160.8
Q ss_pred cceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-------CCCceEEEEccCCCCCCCCC
Q 001400 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1085)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1085)
|+|++|++ ++++|+|||||||||||++|+|.++|. +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999998876 99999999876421 12457999999998888999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCcccc
Q 001400 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1085)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1085)
|+||+.+..... . . . .....++++++.+||++..++.+ .
T Consensus 92 ~~~~l~~~~~~~---~--~------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (214)
T cd03297 92 VRENLAFGLKRK---R--N------R-------------------------EDRISVDELLDLLGLDHLLNRYP-----A 130 (214)
T ss_pred HHHHHHHHHhhC---C--H------H-------------------------HHHHHHHHHHHHcCCHhHhhcCc-----c
Confidence 999998753210 0 0 0 00123677889999987666544 5
Q ss_pred cCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEecCCe
Q 001400 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1085)
Q Consensus 306 ~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~~G~ 385 (1085)
.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999987643 4556668899999999999999999999
Q ss_pred EEEec
Q 001400 386 IVYQG 390 (1085)
Q Consensus 386 iv~~G 390 (1085)
++..|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98765
No 488
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-34 Score=311.07 Aligned_cols=211 Identities=24% Similarity=0.353 Sum_probs=167.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 35999999999999999999999999999999999998641 12589999999876532 124679999999987
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++ +||+||+.+.....+.... + ..+..+++.++.+|+....+.. .
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~-~ 140 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKSK-H--------------------------------KLDRIVEESLKKAALWDEVKSE-L 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCCchhHHH-H
Confidence 77 8999999886432211000 0 0012256677778875321111 1
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+..+.+||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++.+ + ++++.++|+.+++.+++|++++
T Consensus 141 ~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d~i~~ 217 (250)
T PRK14262 141 NKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIADYIAF 217 (250)
T ss_pred hCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCCEEEE
Confidence 334567999999999999999999999999999999999999999999999853 3 4566678888889999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|+++..|+.+++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 218 MYRGELIEYGPTREIV 233 (250)
T ss_pred EECCEEEEecCHHHHH
Confidence 9999999999987764
No 489
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=311.28 Aligned_cols=210 Identities=22% Similarity=0.293 Sum_probs=166.6
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
.+|+|+|+.|++|++++|+||||||||||+++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 5999999999999999999999999999999999997631 13599999999987531 1246799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+. ||+||+.+.....+... + + ..+..++++++.+|+.....+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~--~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINN--R---R----------------------------VLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCc--H---H----------------------------HHHHHHHHHHHHcCCChhHHHHh-h
Confidence 75 99999987643321100 0 0 00123566777788753211111 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
.....|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + .+++.++|+.+++.+++|++++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--K-YTIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEeCCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999999864 3 45666788889999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001400 382 SEGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1085)
++|++++.|+.+++.
T Consensus 241 ~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 241 YMGKLVEYGDTDTLF 255 (272)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999887653
No 490
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=307.77 Aligned_cols=211 Identities=20% Similarity=0.272 Sum_probs=163.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhC--CCCceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
+.+|+|+|++|++|++++|+|||||||||||++|+|..+ +....+|+|.++|.++... ..++.++|++|++.+
T Consensus 18 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (252)
T PRK14255 18 FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNP 97 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCcc
Confidence 359999999999999999999999999999999999864 3212489999999877421 124579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++ .||+||+.+.....+.... +. ....+.+.++.+++........
T Consensus 98 ~~-~tv~~nl~~~~~~~~~~~~-~~--------------------------------~~~~~~~~l~~~~l~~~i~~~~- 142 (252)
T PRK14255 98 FP-FSIYENVIYGLRLAGVKDK-AV--------------------------------LDEAVETSLKQAAIWDEVKDHL- 142 (252)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH-HH--------------------------------HHHHHHHHHHHcCCccchhhHH-
Confidence 87 6999999886433221000 00 0112344556666532111111
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+..+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++++.++|+..++.+++|+|++
T Consensus 143 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~ 219 (252)
T PRK14255 143 HESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTAF 219 (252)
T ss_pred hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEEE
Confidence 233457999999999999999999999999999999999999999999999864 3 4566688888999999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|+++..|+..++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 220 FLTGNLIEFADTKQMF 235 (252)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999887653
No 491
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1e-33 Score=316.77 Aligned_cols=215 Identities=24% Similarity=0.331 Sum_probs=185.8
Q ss_pred ccccccccccCCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCCh----hcccceEE
Q 001400 830 VELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISG 905 (1085)
Q Consensus 830 ~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g 905 (1085)
+++++..+.++...+++||||+|++||+.||+|.|||||||||++|.|... |.+|+|.++|++.+- ...+..||
T Consensus 5 l~~~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~--P~~GeI~v~G~~v~~~sP~dA~~~GIG 82 (501)
T COG3845 5 LEMRGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQ--PDSGEIRVDGKEVRIKSPRDAIRLGIG 82 (501)
T ss_pred EEEeccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCccc--CCcceEEECCEEeccCCHHHHHHcCCc
Confidence 345566667788899999999999999999999999999999999999877 579999999997542 34566799
Q ss_pred EEccCCCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhc
Q 001400 906 YCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1085)
Q Consensus 906 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~ 985 (1085)
+|.|+..+.|++||.||+..+..-......+.....+.++++.+..++.--.+..+ ..||.||||||.|-++|.+
T Consensus 83 MVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V-----~dLsVG~qQRVEIlKaLyr 157 (501)
T COG3845 83 MVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKV-----ADLSVGEQQRVEILKALYR 157 (501)
T ss_pred EEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcccee-----ecCCcchhHHHHHHHHHhc
Confidence 99999999999999999998753222223355666778999999999987667665 4799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecC
Q 001400 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1085)
Q Consensus 986 ~p~illlDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~ 1053 (1085)
+|++|||||||+-|-|.....+++++++++++|+|||+|||.+. ++.+.|||+-||.+ |+++-.-+
T Consensus 158 ~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~-Ev~~iaDrvTVLR~-Gkvvgt~~ 223 (501)
T COG3845 158 GARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLK-EVMAIADRVTVLRR-GKVVGTVD 223 (501)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhhCeeEEEeC-CeEEeeec
Confidence 99999999999999999999999999999999999999999997 79999999999985 67765544
No 492
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-33 Score=307.29 Aligned_cols=205 Identities=20% Similarity=0.284 Sum_probs=167.2
Q ss_pred CCeEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 001400 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1085)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gy~~Q~~~~~~~~tv 919 (1085)
....+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|. +++++|...+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCE----------EeEEecccCCCCCCcH
Confidence 45679999999999999999999999999999999999876 46899999985 3567777777778999
Q ss_pred HHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Q 001400 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1085)
Q Consensus 920 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~illlDEPtsgL 999 (1085)
.||+.+...... .........++++++.+++.+..+.. +..||+|||||++||+||+.+|+||||||||+||
T Consensus 103 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCMG---FKRKEIKAMTPKIIEFSELGEFIYQP-----VKKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----cccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 999987543221 12233344567788888887665543 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEEecCcEEEEecCCCCchHHHHHHHH
Q 001400 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFE 1066 (1085)
Q Consensus 1000 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l~~gG~~~~~g~~~~~~~~~~~~~~ 1066 (1085)
|+.++..+++.|+++.+.|+|||++||+++ .+.+.+|++++|+ +|+++..|+..+......+||.
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~~~~~~~~~~~~ 239 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIE-GGKLKDYGELDDVLPKYEAFLN 239 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEE-CCEEEEeCCHHHHHHHhHHHHH
Confidence 999999999999998777999999999976 4677899999998 4788888876543334444443
No 493
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=312.07 Aligned_cols=208 Identities=22% Similarity=0.282 Sum_probs=163.0
Q ss_pred eecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCC--ceeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 001400 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1085)
.+|+|+|+.|++||+++|+|||||||||||++|+|.+++.. +.+|+|.++|+++... ..++.++|++|++.++
T Consensus 34 ~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~i~~v~q~~~l~ 113 (274)
T PRK14265 34 LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQVGMVFQRPNPF 113 (274)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhcEEEEccCCccc
Confidence 59999999999999999999999999999999999875321 2489999999876431 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+. ||.||+.++....+... + .+..++..++.+++........ +
T Consensus 114 ~~-tv~~nl~~~~~~~~~~~------~-----------------------------~~~~~~~~l~~~~l~~~l~~~~-~ 156 (274)
T PRK14265 114 PK-SIYENIAFAPRANGYKG------N-----------------------------LDELVEDSLRRAAIWEEVKDKL-K 156 (274)
T ss_pred cc-cHHHHHHhHHHhcCchH------H-----------------------------HHHHHHHHHHHcccchhhHHHh-c
Confidence 64 99999987543211000 0 0011344556666532111111 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
..+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|++++|
T Consensus 157 ~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 233 (274)
T PRK14265 157 EKGTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE--Q-YTIIMVTHNMQQASRVADWTAFF 233 (274)
T ss_pred CCcccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999853 3 56677889999999999999999
Q ss_pred c---------CCeEEEecChhhHH
Q 001400 382 S---------EGQIVYQGPRVSVL 396 (1085)
Q Consensus 382 ~---------~G~iv~~G~~~~~~ 396 (1085)
+ +|++++.|+.+++.
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~~~~~ 257 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPTEQMF 257 (274)
T ss_pred ecccccccccCceEEEeCCHHHHH
Confidence 7 89999999998874
No 494
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=309.61 Aligned_cols=208 Identities=24% Similarity=0.298 Sum_probs=165.5
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCC--ceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 369999999999999999999999999999999999986531 1489999999887531 124579999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCc----cccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCAD 296 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 296 (1085)
++.+|+.||+.++....+.. ..+. ....++.+++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~-~~~~--------------------------------~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIR-DRDH--------------------------------LMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCC-CHHH--------------------------------HHHHHHHHHHHcCcchhhhhhhc
Confidence 99999999998754322110 0000 011234445555543 2334
Q ss_pred ccccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcC
Q 001400 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1085)
Q Consensus 297 t~vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1085)
+ .++.||||||||++||+||+.+|++|+|||||+|||..++..+.+.|+++++ + ++++.++|+..++.+++|
T Consensus 144 ~-----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 T-----PATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--V-TTIIIVTHNMHQAARVSD 215 (252)
T ss_pred C-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCC
Confidence 3 3457999999999999999999999999999999999999999999998853 3 566668888899999999
Q ss_pred eEEEecCCeEEEecChhhHH
Q 001400 377 DVILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 377 ~ii~L~~G~iv~~G~~~~~~ 396 (1085)
++++|++|++++.|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 495
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=310.21 Aligned_cols=211 Identities=23% Similarity=0.304 Sum_probs=166.6
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCC--ceeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1085)
+.+|+|+|++|++|++++|+||||||||||+++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 98 (253)
T PRK14261 19 KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNP 98 (253)
T ss_pred eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCcc
Confidence 359999999999999999999999999999999999875321 2489999999987542 124579999999987
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccccc
Q 001400 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1085)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1085)
++. ||+||+.|..+..+.... . ..+..++.+++.++|.+...+..
T Consensus 99 ~~~-tv~eni~~~~~~~~~~~~-------------------~--------------~~~~~~~~~l~~~~l~~~l~~~~- 143 (253)
T PRK14261 99 FPK-SIYENVAYGPRIHGEKNK-------------------K--------------TLDTIVEKSLKGAALWDEVKDRL- 143 (253)
T ss_pred Ccc-cHHHHHHhhHHhcCCCCH-------------------H--------------HHHHHHHHHHHHhcCchhhHHHh-
Confidence 874 999999986543211000 0 00123556677777743211111
Q ss_pred CcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEE
Q 001400 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1085)
Q Consensus 301 ~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~ 380 (1085)
+...+.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++.+++|++++
T Consensus 144 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~ 220 (253)
T PRK14261 144 HDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGF 220 (253)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEE
Confidence 234567999999999999999999999999999999999999999999998864 3 4566688888999999999999
Q ss_pred ecCCeEEEecChhhHH
Q 001400 381 LSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1085)
|++|+++..|+.+++.
T Consensus 221 l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 221 MYLGKLIEFDKTTQIF 236 (253)
T ss_pred EECCEEEEcCCHHHHH
Confidence 9999999999987763
No 496
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.1e-33 Score=309.74 Aligned_cols=200 Identities=27% Similarity=0.396 Sum_probs=166.6
Q ss_pred ecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCCH
Q 001400 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTV 226 (1085)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 226 (1085)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999874 2 8999999988754332 3468999999887888999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccCccccc
Q 001400 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1085)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1085)
+||+.+.... .. .. ......++++++.+||.+..++.+ +.
T Consensus 87 ~~nl~~~~~~-~~-~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (248)
T PRK03695 87 FQYLTLHQPD-KT-RT---------------------------------EAVASALNEVAEALGLDDKLGRSV-----NQ 126 (248)
T ss_pred HHHHHhcCcc-CC-Cc---------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----cc
Confidence 9999875211 00 00 000123678899999987666554 46
Q ss_pred CchhhhhHHHHHHHHhC-------CCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEE
Q 001400 307 ISGGQKKRLTTGELLVG-------PARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1085)
Q Consensus 307 LSGGqkqRvsia~al~~-------~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii 379 (1085)
||||||||++||+||+. +|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+..++..++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~--~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQ--GIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 67999999999999999999999999998653 4566668899999999999999
Q ss_pred EecCCeEEEecChhhH
Q 001400 380 LLSEGQIVYQGPRVSV 395 (1085)
Q Consensus 380 ~L~~G~iv~~G~~~~~ 395 (1085)
+|++|++++.|+.+++
T Consensus 205 ~l~~G~i~~~g~~~~~ 220 (248)
T PRK03695 205 LLKQGKLLASGRRDEV 220 (248)
T ss_pred EEECCEEEEECCHHHH
Confidence 9999999999987765
No 497
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.1e-33 Score=305.34 Aligned_cols=190 Identities=25% Similarity=0.298 Sum_probs=155.3
Q ss_pred eEEeeeeeEEEeCCeEEEEEccCCCChhHHHhhhhCCCCCCeeeeEEEEc--Cc--cCCh---hc----ccceEEEEccC
Q 001400 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYIS--GY--PKRQ---ET----FARISGYCEQN 910 (1085)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~--g~--~~~~---~~----~~~~~gy~~Q~ 910 (1085)
..+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++ |. +... .. .++.+||++|+
T Consensus 21 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 98 (224)
T TIGR02324 21 LPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAWVDLAQASPREVLEVRRKTIGYVSQF 98 (224)
T ss_pred eEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCccchhhcCHHHHHHHHhcceEEEecc
Confidence 579999999999999999999999999999999999866 468999998 42 3221 11 23569999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhcCCCE
Q 001400 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1085)
Q Consensus 911 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~LS~Gqrqrl~iA~aL~~~p~i 989 (1085)
+.+++.+|+.|++.+..... ........+.+.++++.+++.+. .+.. +.+||+|||||++|||||+.+|++
T Consensus 99 ~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~laral~~~p~l 170 (224)
T TIGR02324 99 LRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP-----PATFSGGEQQRVNIARGFIADYPI 170 (224)
T ss_pred cccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 98999999999998754322 11222334567788999888652 2332 357999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHCCceEEEEecCccHHHHHhcCEEEEE
Q 001400 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1085)
Q Consensus 990 lllDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~il~l 1042 (1085)
|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ .+...+|+++.+
T Consensus 171 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~ 222 (224)
T TIGR02324 171 LLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDV 222 (224)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEec
Confidence 9999999999999999999999999777999999999965 355689998876
No 498
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=6.8e-34 Score=309.99 Aligned_cols=206 Identities=24% Similarity=0.339 Sum_probs=157.9
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1085)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++ .
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPT---SGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-G 91 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCC---CCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-h
Confidence 46999999999999999999999999999999999998776 999999998765332 1356999999987665 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHh--CCcccccccccCc
Q 001400 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL--GLDTCADTLVGDE 302 (1085)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 302 (1085)
||+||+.+...... .+ +..... +. ......++.+ |+....+ .
T Consensus 92 tv~e~l~~~~~~~~----~~---~~~~~~---------------~~---------~~~~~~~~~l~~~~~~~~~-----~ 135 (238)
T cd03249 92 TIAENIRYGKPDAT----DE---EVEEAA---------------KK---------ANIHDFIMSLPDGYDTLVG-----E 135 (238)
T ss_pred hHHHHhhccCCCCC----HH---HHHHHH---------------HH---------cChHHHHHhhccccceeec-----c
Confidence 99999987532110 00 000000 00 0012223333 3433333 2
Q ss_pred ccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEec
Q 001400 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1085)
Q Consensus 303 ~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L~ 382 (1085)
.++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+.+++. .||++++|+
T Consensus 136 ~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~--~g-~~vi~~sh~~~~~~-~~d~v~~l~ 211 (238)
T cd03249 136 RGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM--KG-RTTIVIAHRLSTIR-NADLIAVLQ 211 (238)
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc--CC-CEEEEEeCCHHHHh-hCCEEEEEE
Confidence 346799999999999999999999999999999999999999999999874 24 45555777778875 899999999
Q ss_pred CCeEEEecChhhHHH
Q 001400 383 EGQIVYQGPRVSVLD 397 (1085)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1085)
+|++++.|+.+++.+
T Consensus 212 ~G~i~~~~~~~~~~~ 226 (238)
T cd03249 212 NGQVVEQGTHDELMA 226 (238)
T ss_pred CCEEEEeCCHHHHhh
Confidence 999999999877654
No 499
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=309.99 Aligned_cols=210 Identities=22% Similarity=0.306 Sum_probs=165.3
Q ss_pred eeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCC--CceeeEEEECCccCCC-C---CCCceEEEEccCCCCC
Q 001400 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKE-F---VPPRTSAYVSQQDWQV 221 (1085)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~i~~~G~~~~~-~---~~~~~~~yv~Q~d~~~ 221 (1085)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.+++. .+.+|+|.++|.++.. . ..++.++|++|++.++
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 95 (249)
T PRK14253 16 NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPF 95 (249)
T ss_pred eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcC
Confidence 46999999999999999999999999999999999987642 1248999999987642 1 1245799999999878
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCcccccccccC
Q 001400 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1085)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1085)
+ .||.||+.++....+.... . .....+++.++.+|+.+...... +
T Consensus 96 ~-~tv~~~l~~~~~~~~~~~~-------------------~--------------~~~~~~~~~~~~~~l~~~~~~~~-~ 140 (249)
T PRK14253 96 P-MSIYENVAYGLRAQGIKDK-------------------K--------------VLDEVVERSLRGAALWDEVKDRL-K 140 (249)
T ss_pred c-ccHHHHHHhHHHhcCCCch-------------------H--------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 8999999876432111000 0 00123556677777653221111 2
Q ss_pred cccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeEEEe
Q 001400 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1085)
Q Consensus 302 ~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ii~L 381 (1085)
.....|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+..++.+++|++++|
T Consensus 141 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l 217 (249)
T PRK14253 141 SHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFF 217 (249)
T ss_pred cCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999999864 3 45666788889999999999999
Q ss_pred cCCeEEEecChhhH
Q 001400 382 SEGQIVYQGPRVSV 395 (1085)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1085)
++|++++.|+.+++
T Consensus 218 ~~G~i~~~g~~~~~ 231 (249)
T PRK14253 218 LMGELVEHDDTQVI 231 (249)
T ss_pred ECCEEEEeCCHHHH
Confidence 99999999987765
No 500
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.2e-34 Score=327.13 Aligned_cols=210 Identities=28% Similarity=0.361 Sum_probs=177.0
Q ss_pred cceeecccceeeEeCCeEEEEeCCCCCChhHHHHHHHhhhCCCCceeeEEEECCccCCCC-----CCCceEEEEccCC--
Q 001400 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQD-- 218 (1085)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~i~~~G~~~~~~-----~~~~~~~yv~Q~d-- 218 (1085)
....+++||||.+++||+++|+|+||||||||.++|+|+++|. +|+|.++|.+.+.. ..++.+-+|+|++
T Consensus 302 ~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~ 378 (539)
T COG1123 302 GEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYS 378 (539)
T ss_pred cceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCccc
Confidence 4568999999999999999999999999999999999999886 99999999872211 1235677888886
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchHHHHHHHhhhcCcchhHHHHHHHHHhCCccccccc
Q 001400 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1085)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1085)
.+.|.+||+++|.......+... ..+.+.+++++++..||+..
T Consensus 379 SLnPr~tV~~~i~epL~~~~~~~---------------------------------~~~~~~rv~~ll~~VgL~~~---- 421 (539)
T COG1123 379 SLNPRMTVGDILAEPLRIHGGGS---------------------------------GAERRARVAELLELVGLPPE---- 421 (539)
T ss_pred ccCccccHHHHHHhHHhhhcccc---------------------------------hHHHHHHHHHHHHHcCCCHH----
Confidence 57899999999987665433211 01123358999999999842
Q ss_pred ccCcccccCchhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCEEEEEEecChhHHHhhcCeE
Q 001400 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1085)
Q Consensus 299 vg~~~~~~LSGGqkqRvsia~al~~~p~vlllDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~i 378 (1085)
..++++..|||||||||+|||||+.+|+++++|||||+||++++.++.++|+++.++.+ .+.+.++|+..-+..+||||
T Consensus 422 ~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g-~t~lfISHDl~vV~~i~drv 500 (539)
T COG1123 422 FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELG-LTYLFISHDLAVVRYIADRV 500 (539)
T ss_pred HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhC-CEEEEEeCCHHHHHhhCceE
Confidence 33466778999999999999999999999999999999999999999999999988764 56667999999999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 001400 379 ILLSEGQIVYQGPRVSVL 396 (1085)
Q Consensus 379 i~L~~G~iv~~G~~~~~~ 396 (1085)
++|++|+||..||.+++.
T Consensus 501 ~vm~~G~iVE~G~~~~v~ 518 (539)
T COG1123 501 AVMYDGRIVEEGPTEKVF 518 (539)
T ss_pred EEEECCeEEEeCCHHHHh
Confidence 999999999999998884
Done!