BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001405
(1083 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255539477|ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
gi|223549918|gb|EEF51405.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
Length = 1100
Score = 1542 bits (3993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 795/1111 (71%), Positives = 901/1111 (81%), Gaps = 39/1111 (3%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPK----IAATVSFSPAKRKVVSS 56
MGKQKQQVISRFFAPK T+ S+ S P T P I ATVSFSPAKRK++S+
Sbjct: 1 MGKQKQQVISRFFAPKPKTTSPSTPPSPSASPPPTTPTPSSPKITATVSFSPAKRKLLST 60
Query: 57 LFPPKTPKKPKLSPHTLNPIPTPSSQ---------------------TTHNKKYTPLEQQ 95
TPKKPKLS N IPTPSS +++ +KYTPLE+Q
Sbjct: 61 HLT-STPKKPKLSD---NDIPTPSSSLHQKFLNKFLEPSSPEIPQPPSSYPRKYTPLEKQ 116
Query: 96 VVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVR 155
V++LKTKYPDVLLMIEVGYK+RFFGEDAE+A +VLGIYAH DHNFMTASIPTFRLNVHVR
Sbjct: 117 VLDLKTKYPDVLLMIEVGYKYRFFGEDAEIAGRVLGIYAHKDHNFMTASIPTFRLNVHVR 176
Query: 156 RLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGE 215
RLV+AG+KVGVVKQTETAAIKAHG KAGPF RGLSALYTKATLEAAEDVGG E+GC GE
Sbjct: 177 RLVSAGYKVGVVKQTETAAIKAHGDNKAGPFCRGLSALYTKATLEAAEDVGGREEGCCGE 236
Query: 216 SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVL 275
SNYL CVVD I NGV GFD R+G VAVEISTGDVVYGEFNDGFLRSGLEAV+
Sbjct: 237 SNYLCCVVDKS-----IENGV-DSGFDTRIGFVAVEISTGDVVYGEFNDGFLRSGLEAVV 290
Query: 276 LSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGE 335
LSL PAELLLG PLSKQTEK+LLAYAGP+SNVRVE AS F GGALAEV+ LYENMGE
Sbjct: 291 LSLMPAELLLGDPLSKQTEKLLLAYAGPSSNVRVERASGHHFNDGGALAEVILLYENMGE 350
Query: 336 DTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR 395
++E+Q M+ Q AIEGIMNMPDLAVQALALTI HLKQFG E+I+ LGASFR
Sbjct: 351 HKAEDDENQMMERTHQDISYLAIEGIMNMPDLAVQALALTISHLKQFGFEQILRLGASFR 410
Query: 396 SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDR 455
L+ ++EM LSANTLQQLEVLRNNSNGS+ G+L +IMNHTLTI GSRLLR WVTHPLCDR
Sbjct: 411 PLTSNVEMNLSANTLQQLEVLRNNSNGSDSGSLFNIMNHTLTISGSRLLRHWVTHPLCDR 470
Query: 456 NLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDI 515
N+ISARLDAVSEIAESMGSY+ ++ G DE++SDV I++P FY++LS+VL LGRSPDI
Sbjct: 471 NMISARLDAVSEIAESMGSYKALQNTGDFDEEDSDVAIIQPDFYHLLSTVLEMLGRSPDI 530
Query: 516 QRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK-VTSKTLHSALLKRLIL 574
QRGITRIFHRTAT SEFIAV+QAIL AGKQL++L I+ E K V +KT+ S LLK+LIL
Sbjct: 531 QRGITRIFHRTATASEFIAVIQAILIAGKQLRRLQIEEEQNNKRVQAKTVRSVLLKKLIL 590
Query: 575 TASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLI 634
T SS +V+G AAKLLST+NKEAA+ GDL NL++ISNGQF EVA + KAV AKE+LDSLI
Sbjct: 591 TVSSSSVVGHAAKLLSTLNKEAAEHGDLTNLIVISNGQFPEVASSNKAVHLAKEKLDSLI 650
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
N+ RKQL MR+LEFMSVSG THLIELPA+ KVPLNW K+NSTKK IRYH PEVLTALDQL
Sbjct: 651 NLYRKQLKMRSLEFMSVSGTTHLIELPADVKVPLNWVKINSTKKMIRYHPPEVLTALDQL 710
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
ALANEEL +VCRAAWDSFL+ F +YAEFQA +QALAALDCLH+LA LS+NKN+VRPVFV
Sbjct: 711 ALANEELMVVCRAAWDSFLRSFAKHYAEFQAVIQALAALDCLHSLAILSKNKNYVRPVFV 770
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
DD+EPVQIHI SGRHPVL+TILLDNFVPNDT LH + E+CQ++TGPNMGGKSCYIRQVAL
Sbjct: 771 DDNEPVQIHISSGRHPVLETILLDNFVPNDTCLHVDGEHCQVVTGPNMGGKSCYIRQVAL 830
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
I +MAQVGSFVPASSA+LHVLDGIYTRMGASDSIQQGRSTFLEEL+E S+ILR CT SL
Sbjct: 831 IVMMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILRKCTGYSL 890
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVS 934
VI+DELGRGTSTHDG AIAYATL +LLE K+CMVLFVTHYPKIA+I+T F SVG YHVS
Sbjct: 891 VIIDELGRGTSTHDGEAIAYATLCHLLEQKRCMVLFVTHYPKIANIRTGFLNSVGAYHVS 950
Query: 935 YLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
YL + K DSK D +DVTYLYK+VPGVSE SFGFKVAQLAQLP SCI RATV+AA+L
Sbjct: 951 YLMAEKNNDATDSKFDNEDVTYLYKLVPGVSERSFGFKVAQLAQLPTSCIERATVMAARL 1010
Query: 994 EAEVSSRVQNRSAKRDLLVKLS-DQEQEAQENMPVSPESFYLGRVEASEDLISAYRDLFL 1052
E +S R++NR K LL L DQ QE QE +P SP +F+ R+E E+L + Y FL
Sbjct: 1011 EEAISCRIRNRLDKSQLLKALQIDQLQEIQEKIPESPGNFHDKRIENYEELNNTYEKFFL 1070
Query: 1053 NLKFATHDDNPAKSFQFLKHARSIAKELIIR 1083
N K A D+ AKSFQ+L++ARSIA+ LI R
Sbjct: 1071 NFKSALLGDD-AKSFQYLENARSIARALIKR 1100
>gi|359490375|ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 1475 bits (3818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 767/1121 (68%), Positives = 897/1121 (80%), Gaps = 52/1121 (4%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPK----------IAATVSFSPAK 50
MGKQKQQVISRFFAPK ++SSS+ P P I+ TV+FSP+K
Sbjct: 1 MGKQKQQVISRFFAPKPKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK 60
Query: 51 RKVVSSLFPP-KTPKKPKLSPHTLNP---------IPTPSSQTTH-----NKKYTPLEQQ 95
R S + P K PK PK+S H ++P + PSS T KYTPLEQQ
Sbjct: 61 RLPSSHVSPSTKPPKAPKIS-HPIDPSLHQKFVQKLLEPSSSTPTKLPLPTTKYTPLEQQ 119
Query: 96 VVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVR 155
VV+LK KYPDVLLM+EVGY++RFFGEDAE+AA+VLGIYAH+DHNF+TASIPTFRLNVHVR
Sbjct: 120 VVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLGIYAHVDHNFLTASIPTFRLNVHVR 179
Query: 156 RLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGE 215
RLV+AGFKVGVVKQTETAAIKAHG K GPF RGLSALYTKATLEAAE+VGGGE+ CG
Sbjct: 180 RLVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAEEVGGGEEECGSY 239
Query: 216 SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVL 275
+NYLVCVV+ +V ++ G GFDVR+G+VAVE+STGDVV+GEFND F+R+GLEAV+
Sbjct: 240 NNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGEFNDNFMRAGLEAVI 299
Query: 276 LSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGE 335
LS+SPAELLLG PLSKQTEK+LLAYAGPASNVRVE SRDCF GGALAEVMSLYEN+ E
Sbjct: 300 LSMSPAELLLGYPLSKQTEKLLLAYAGPASNVRVERTSRDCFSDGGALAEVMSLYENLSE 359
Query: 336 DTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR 395
++ ++++ N +V EQ NH AIEGIM+MPDLAVQALALTIRHLKQFGLERI+C+GASFR
Sbjct: 360 NSRADHQVDNTEVMEQENHCLAIEGIMSMPDLAVQALALTIRHLKQFGLERILCMGASFR 419
Query: 396 SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDR 455
S +MEMTLSAN LQQLEVL N+S+GSE G+LLH MNHTLTI+GSRLLR WV+HPLCD
Sbjct: 420 PFSSNMEMTLSANALQQLEVLNNHSDGSESGSLLHTMNHTLTIFGSRLLRHWVSHPLCDS 479
Query: 456 NLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDI 515
N+ISARLDAVSEI SMGS + S++ G DE +SDVT V+P+ Y+LSSVLT+LGRSPDI
Sbjct: 480 NMISARLDAVSEIVMSMGSCKASQNFGGIDEGDSDVTYVQPEVNYLLSSVLTTLGRSPDI 539
Query: 516 QRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI-DGEYREKVTSKTLHSALLKRLIL 574
QRG+TRIFHRTAT SEFI+V QAIL+AGKQLQ+LHI + + EK S+++ S LL++LIL
Sbjct: 540 QRGLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQSRSVRSVLLRKLIL 599
Query: 575 TASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLI 634
TASS +IG AAKLLST+NKEAAD+GDL NL IIS+GQF EVA+AR VQSAKE+LD LI
Sbjct: 600 TASSSGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQFPEVAKARSLVQSAKEKLDLLI 659
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
+ RKQL M NLEFMSVSG THLIELP + KVP NW KVNSTKKT+RYH PEVL+ALDQL
Sbjct: 660 GLYRKQLRMNNLEFMSVSGTTHLIELPVDVKVPSNWVKVNSTKKTVRYHPPEVLSALDQL 719
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
+LANEEL I CR AWDSFL+ F Y++EFQAAVQALA LDCLH+LA LSRNKN+VRPVFV
Sbjct: 720 SLANEELMIACRGAWDSFLRAFDKYFSEFQAAVQALATLDCLHSLAILSRNKNYVRPVFV 779
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
D EPVQ+HICSGRHPVL+T+L DNFVPNDTNLHA+ EYC+I+TGPNMGGKSCYIRQVAL
Sbjct: 780 GDSEPVQMHICSGRHPVLETVLQDNFVPNDTNLHADGEYCEIVTGPNMGGKSCYIRQVAL 839
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
I IMAQVGSFVPASSA+L VLDGI+TRMG+SDSIQQGRSTFLEEL+EAS+I+ NCT++SL
Sbjct: 840 IAIMAQVGSFVPASSAKLCVLDGIHTRMGSSDSIQQGRSTFLEELSEASHIIHNCTSRSL 899
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVS 934
VI+DELGRGTSTHDGVAIAYATL YLLEHK+CMVLFVTHYPKI D+K +F GSVG YHVS
Sbjct: 900 VIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPKIVDVKNEFPGSVGAYHVS 959
Query: 935 YLTSHKVMGPM--------------DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPP 980
Y+ S + M + +DVTYLYK+VPGVSE SFGFKVAQLAQLP
Sbjct: 960 YMMSQRAMDMDTDTDKTDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPS 1019
Query: 981 SCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRVEAS 1040
SCI RA V+AA+LEA + SRV+N SA++ L Q +Q+++ + ++
Sbjct: 1020 SCIRRANVMAAELEAMIVSRVKNSSAQKTL--------QGSQQSISIQSGCSRAEQIGLE 1071
Query: 1041 EDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELI 1081
ED A R+ FL+LK A + +P +S QFLKHARSIAKELI
Sbjct: 1072 ED---ACREFFLDLKSALGNADPERSLQFLKHARSIAKELI 1109
>gi|224136986|ref|XP_002322465.1| predicted protein [Populus trichocarpa]
gi|222869461|gb|EEF06592.1| predicted protein [Populus trichocarpa]
Length = 1092
Score = 1444 bits (3737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 767/1134 (67%), Positives = 877/1134 (77%), Gaps = 93/1134 (8%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAAT----VSFSPAKRKVVSS 56
MGKQKQQ+ISRFFAPKS TT S P PPQ P + V+FSP+KR ++S+
Sbjct: 1 MGKQKQQIISRFFAPKSKPTTTSPPPPPPPPPQTAPSSSSSPKITTTVAFSPSKRNLLST 60
Query: 57 LFPPKTPKKPKLSPHTLNPIPTPSSQTTHN------------------KKYTPLEQQVVE 98
TPK+PKLSPHT NP+P+ + +K+TPLEQQVV+
Sbjct: 61 RIT-STPKRPKLSPHTQNPLPSLHKKFVDKLLEPQTPQTPQPQNTQNTQKFTPLEQQVVD 119
Query: 99 LKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLV 158
LK +YPDVLLMIEVGYKFRFFGEDAE+AA+VLGIYAH DHNFMTAS
Sbjct: 120 LKQRYPDVLLMIEVGYKFRFFGEDAEIAARVLGIYAHKDHNFMTAS-------------- 165
Query: 159 NAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNY 218
+KVGVVKQTETAAIKAHG K+GPF RGLSALYTKATLEAAE+VGG E+ CGGESNY
Sbjct: 166 ---YKVGVVKQTETAAIKAHGENKSGPFCRGLSALYTKATLEAAENVGGEEEECGGESNY 222
Query: 219 LVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSL 278
L CVV+ + GV G FDVR+GVVAVEISTGDVVYGEFNDGF+RSGLEA +LSL
Sbjct: 223 LCCVVEKG-----LDCGVEGGVFDVRVGVVAVEISTGDVVYGEFNDGFMRSGLEAFVLSL 277
Query: 279 SPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTL 338
+PAELLLG PLSKQTEK+LLAY+GP+SNVRVE SRDCF GGALA+VMSLYENM ED L
Sbjct: 278 APAELLLGDPLSKQTEKLLLAYSGPSSNVRVERVSRDCFSDGGALADVMSLYENMIEDNL 337
Query: 339 SNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLS 398
+NE Q D EQG+ AIEG++ MPDLAV+ALALT+RHLKQFG +R++CLGASFR S
Sbjct: 338 GDNEKQMTDAKEQGSCHLAIEGVIKMPDLAVEALALTVRHLKQFGFDRMLCLGASFRPFS 397
Query: 399 GSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLI 458
+MEM LSANTLQQLEVLRNNS+GSE G+LLHIMNHTLTIYGSRLLR WVTHPLCDRN+I
Sbjct: 398 SNMEMNLSANTLQQLEVLRNNSDGSESGSLLHIMNHTLTIYGSRLLRHWVTHPLCDRNMI 457
Query: 459 SARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRG 518
SARLDAVSEIAE MG + S+ V + DE +S+V IV+P YY+LS+VLT+LGRSPDI+RG
Sbjct: 458 SARLDAVSEIAECMGFSKDSQRVSELDEDDSEVAIVQPDLYYLLSAVLTALGRSPDIERG 517
Query: 519 ITRIFHRTATPSEF---------------------------IAVMQAILYAGKQLQQLHI 551
ITRIFHRTAT SEF IAV QAIL AGKQL++L I
Sbjct: 518 ITRIFHRTATASEFLLMFLIMYLTYLSSFSSPIAVLVWLWFIAVFQAILAAGKQLKRLCI 577
Query: 552 DGEYR-EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN 610
E+ + V SKT+ S LLKRLIL ASS +V+G AAKLLST+NKEAA+QGDL NL+IIS+
Sbjct: 578 QEEHNYDGVGSKTVKSVLLKRLILAASSSSVVGNAAKLLSTLNKEAAEQGDLTNLIIISD 637
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNW 670
QF EVARAR+AVQ AKE+LDSLI + RKQL MRNLEFMSVSG THLIELP +FKVPLNW
Sbjct: 638 DQFPEVARAREAVQFAKEKLDSLIGLYRKQLQMRNLEFMSVSGTTHLIELPLDFKVPLNW 697
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
KVNSTKK IRYH PEVLTALDQL LANEEL IV RAAWDSFL+ FG YYAEF+ AVQAL
Sbjct: 698 VKVNSTKKMIRYHPPEVLTALDQLLLANEELMIVSRAAWDSFLRGFGIYYAEFRGAVQAL 757
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAE 790
A LDCL + ATL +NKN+VRP+FVDD EP+QI+ICSGRHPVL+TIL DNFVPNDTNL A+
Sbjct: 758 ATLDCLFSFATLLKNKNYVRPMFVDDSEPLQINICSGRHPVLETILQDNFVPNDTNLCAD 817
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+EYCQI+TGPNMGGKSCYIRQVALI +MAQVGSFVPA SA+LHVLDGIYTRMGASDSIQQ
Sbjct: 818 KEYCQIVTGPNMGGKSCYIRQVALIALMAQVGSFVPALSAKLHVLDGIYTRMGASDSIQQ 877
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
GRSTFLEEL QSLVI+DELGRGTST+DG AIAYATL +LL+ K+CMVLF
Sbjct: 878 GRSTFLEELT-----------QSLVIIDELGRGTSTYDGEAIAYATLYHLLDQKRCMVLF 926
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFG 969
VTHYPKI +IKT+F GSVG YHVSYLTS K G ++S D +DVTYLYK+VPGVSE SFG
Sbjct: 927 VTHYPKIVEIKTEFPGSVGAYHVSYLTSEKSEGAIESTCDTEDVTYLYKLVPGVSEKSFG 986
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSP 1029
FKVAQLA+LPPSCI RAT++AA+LEA +SSR+ N L V+ Q++EAQENM S
Sbjct: 987 FKVAQLAELPPSCIRRATIMAARLEAVLSSRLGNEQLLETLPVQ---QQEEAQENMLRSD 1043
Query: 1030 ESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELIIR 1083
R+E SED AYR+ F NLK A DD+ A+S QFL+ ARSIAKE + +
Sbjct: 1044 V-----RIEKSEDSTVAYREFFSNLKSAMFDDDVARSSQFLEKARSIAKEFLAK 1092
>gi|356575955|ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
Length = 1070
Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 736/1101 (66%), Positives = 863/1101 (78%), Gaps = 54/1101 (4%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
MGKQKQQVISRFFAPK KI+ATV+FSPAKR++ S+
Sbjct: 1 MGKQKQQVISRFFAPKPKSPPPPPPPPP----------KISATVTFSPAKRRLTSNFTTS 50
Query: 61 KTPKKPKLSPHTLNPIP---------------TPSSQTTHNKK---YTPLEQQVVELKTK 102
+ K PKLSPHT NP+P TP + K YTPLEQQV++LK K
Sbjct: 51 R--KHPKLSPHTQNPVPPSLHQRFLQKLLEPSTPQQHPASSSKPPTYTPLEQQVLDLKAK 108
Query: 103 YPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGF 162
+PDVLLM+EVGYK+RFFG+DAE A++VLGIYAH+DHNF+TASIPTFRLNVHVRRLV AG+
Sbjct: 109 HPDVLLMVEVGYKYRFFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNVHVRRLVTAGY 168
Query: 163 KVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCV 222
KVGVVKQTETAAIKAHG ++ PF RGLSALYTKATLEAA D+GG EDGCGGESNYL+CV
Sbjct: 169 KVGVVKQTETAAIKAHGSNRSAPFERGLSALYTKATLEAAPDLGGAEDGCGGESNYLLCV 228
Query: 223 VDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAE 282
V+ +V + GV D R+G+VAVEISTGDVV+GEF DGFLRS LEAV+L+LSPAE
Sbjct: 229 VEK--SVLDEKGGV-----DARIGIVAVEISTGDVVFGEFCDGFLRSALEAVVLNLSPAE 281
Query: 283 LLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNE 342
LLLG PLSKQTEK+LL +AGPASNVRVE SRDCFI GGALAEVM+LYENM D+ S++
Sbjct: 282 LLLGDPLSKQTEKLLLDFAGPASNVRVERFSRDCFIDGGALAEVMTLYENMHIDSPSDSI 341
Query: 343 DQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME 402
N D+ E + + I+ +MNMPDLAVQALALTIRHLK+FG ERI+C GAS R S + E
Sbjct: 342 QSN-DLTENRSQKLIIKEVMNMPDLAVQALALTIRHLKEFGFERILCSGASIRPFSSNTE 400
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
MTLSAN LQQLEVL+NNS+GSE G+LL IMN TLTI+GSRLLR WV+HPLCD+ LISARL
Sbjct: 401 MTLSANALQQLEVLKNNSDGSEIGSLLQIMNRTLTIFGSRLLRHWVSHPLCDQTLISARL 460
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
AVSEIA+SMGS + +++ + +E + DV IV+P+ Y LS VLT+LGR+PDIQRGITRI
Sbjct: 461 HAVSEIAQSMGSCNSVKNLVRVEE-DPDVAIVQPELAYTLSLVLTTLGRAPDIQRGITRI 519
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
FH TATPSEF+AV+QAIL AGKQLQQL+I GE + TL LLK+LILTASS +VI
Sbjct: 520 FHCTATPSEFVAVIQAILSAGKQLQQLNI-GEG----NNNTLRPNLLKKLILTASSDSVI 574
Query: 583 GKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
G AAK+LS++N ++AD GDL L+I S GQF EV ++R+A + A E+LDS+I+ RKQLG
Sbjct: 575 GNAAKMLSSLNIDSADLGDLTKLIIASEGQFPEVCQSREAFKLAVEQLDSMIDFYRKQLG 634
Query: 643 MRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
M+NLEF+S+SG THLIEL + KVP NW KVNSTKKTIRYH PEVLT LD+L+LA EELT
Sbjct: 635 MKNLEFISISGTTHLIELSTDVKVPSNWVKVNSTKKTIRYHPPEVLTTLDKLSLAKEELT 694
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQI 762
+ CRAAW++FL +F +YAEFQAAVQALAALDCLH+LA LSRNK +V PVFVDDHEPVQI
Sbjct: 695 VACRAAWNNFLTDFSKHYAEFQAAVQALAALDCLHSLAILSRNKGYVCPVFVDDHEPVQI 754
Query: 763 HICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVG 822
I SGRHPVL+T L DNFVPNDTN+HA+ EYCQI+TGPNMGGKSCYIRQVALI IMAQVG
Sbjct: 755 QISSGRHPVLETTLQDNFVPNDTNMHADGEYCQIVTGPNMGGKSCYIRQVALIVIMAQVG 814
Query: 823 SFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGR 882
SFVPASSA+LHVLD IYTRMGASDSIQ GRSTFLEEL+E S+IL +CT SLVI+DELGR
Sbjct: 815 SFVPASSAKLHVLDRIYTRMGASDSIQLGRSTFLEELSETSHILNSCTEHSLVIIDELGR 874
Query: 883 GTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVM 942
GTSTHDG+AIA+ATL YLL+ K+ MVLFVTHYPKIA + T+F GSV YHVS+L SH
Sbjct: 875 GTSTHDGMAIAHATLHYLLKQKRSMVLFVTHYPKIASLATEFPGSVAAYHVSHLISHD-- 932
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+S D DVTYLYK+VPGVSE SFGFKVAQLAQLP CISRA V+A+KLEA V+SR+
Sbjct: 933 ASKNSNLDHDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRIH 992
Query: 1003 NRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRVEASEDLISAYRDLFLNLKFATHDDN 1062
RS K +LL+ QE ++ M S L R D+ AY+D +LNLK AT DD+
Sbjct: 993 GRSTK-ELLLDTLVIGQEKEQLMAQS-----LDRPHKEFDM--AYKDFYLNLKAATEDDD 1044
Query: 1063 PAKSFQFLKHARSIAKELIIR 1083
AKSF L+HARSIAK+LI R
Sbjct: 1045 WAKSFHLLEHARSIAKKLIGR 1065
>gi|30686920|ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein MSH3; Short=AtMSH3;
AltName: Full=MutS protein homolog 3
gi|3319876|emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana]
gi|332659675|gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
Length = 1081
Score = 1395 bits (3611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/1110 (64%), Positives = 851/1110 (76%), Gaps = 61/1110 (5%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
MGKQKQQ ISRFFAPK T +P TPPPKI+ATVSFSP+KRK++S
Sbjct: 1 MGKQKQQTISRFFAPKPKSPT---HEPNPVAESSTPPPKISATVSFSPSKRKLLSDHLAA 57
Query: 61 KTPKKPKLSPHTLNPIPTPS------------------SQTTHNKKYTPLEQQVVELKTK 102
+PKKPKLSPHT NP+P P+ +T+ ++KYTPLEQQVVELK+K
Sbjct: 58 ASPKKPKLSPHTQNPVPDPNLHQRFLQRFLEPSPEEYVPETSSSRKYTPLEQQVVELKSK 117
Query: 103 YPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGF 162
YPDV+LM+EVGY++RFFGEDAE+AA+VLGIYAH+DHNFMTAS+PTFRLN HVRRLVNAG+
Sbjct: 118 YPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNFHVRRLVNAGY 177
Query: 163 KVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCG---GESNYL 219
K+GVVKQTETAAIK+HG + GPF RGLSALYTKATLEAAED+ GG G +SN+L
Sbjct: 178 KIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDISGGCGGEEGFGSQSNFL 237
Query: 220 VCVVDDDGNVGKIRNGVFGDG----FDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVL 275
VCVVD+ ++++ G G FDVR+GVV VEISTG+VVY EFND F+RSGLEAV+
Sbjct: 238 VCVVDE-----RVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFNDNFMRSGLEAVI 292
Query: 276 LSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGE 335
LSLSPAELLLGQPLS+QTEK L+A+AGP SNVRVE AS DCF G A+ EV+SL E +
Sbjct: 293 LSLSPAELLLGQPLSQQTEKFLVAHAGPTSNVRVERASLDCFSNGNAVDEVISLCEKISA 352
Query: 336 DTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR 395
L ++++ ++ E+G + IMNMP L VQALALT HLKQFG ERI+ GASFR
Sbjct: 353 GNLEDDKEMKLEAAEKGMSCLTVHTIMNMPHLTVQALALTFCHLKQFGFERILYQGASFR 412
Query: 396 SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDR 455
SLS + EMTLSANTLQQLEV++NNS+GSE G+L H MNHTLT+YGSRLLR WVTHPLCDR
Sbjct: 413 SLSSNTEMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDR 472
Query: 456 NLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDI 515
NLISARLDAVSEI+ MGS+ +S+ + E+ S+ IV P+FY +LSSVLT++ RS DI
Sbjct: 473 NLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDI 532
Query: 516 QRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI--DGEYREKVTSKTLHSALLKRLI 573
QRGITRIFHRTA +EFIAVM+AIL AGKQ+Q+L I D E R + S T+ S LL++LI
Sbjct: 533 QRGITRIFHRTAKATEFIAVMEAILLAGKQIQRLGIKQDSEMR-SMQSATVRSTLLRKLI 591
Query: 574 LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSL 633
SSP V+ A KLLS +NKEAA +GDLL+++I S+ QF E+A AR+AV +E+LDS
Sbjct: 592 SVISSPVVVDNAGKLLSALNKEAAVRGDLLDILITSSDQFPELAEARQAVLVIREKLDSS 651
Query: 634 INMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQ 693
I RK+L +RNLEF+ VSGITHLIELP + KVP+NW KVNSTKKTIRYH PE++ LD+
Sbjct: 652 IASFRKKLAIRNLEFLQVSGITHLIELPVDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDE 711
Query: 694 LALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVF 753
LALA E L IV RA+WDSFLK F YY +F+AAVQALAALDCLH+L+TLSRNKN+VRP F
Sbjct: 712 LALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSRNKNYVRPEF 771
Query: 754 VDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
VDD EPV+I+I SGRHPVL+TIL DNFVPNDT LHAE EYCQIITGPNMGGKSCYIRQVA
Sbjct: 772 VDDCEPVEINIQSGRHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVA 831
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
LI IMAQVGSFVPAS A+LHVLDG++TRMGASDSIQ GRSTFLEEL+EAS+I+R C+++S
Sbjct: 832 LISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRS 891
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHV 933
LVI+DELGRGTSTHDGVAIAYATL +LL K+C+VLFVTHYP+IA+I F GSVGTYHV
Sbjct: 892 LVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHV 951
Query: 934 SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
SYLT K G D DVTYLYK+V G+ SFGFKVAQLAQ+PPSCI RA +AAKL
Sbjct: 952 SYLTLQKDKGSYD---HDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKL 1008
Query: 994 EAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRVEASEDLISAYRDLFLN 1053
EAEV +R +N E E E +E+ ISA DLF +
Sbjct: 1009 EAEVRARERNTRMG----------EPEGHEE------------PRGAEESISALGDLFAD 1046
Query: 1054 LKFATHDDNPAKSFQFLKHARSIAKELIIR 1083
LKFA +++P K+F+FLKHA IA ++ ++
Sbjct: 1047 LKFALSEEDPWKAFEFLKHAWKIAGKIRLK 1076
>gi|297799442|ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata]
gi|297313441|gb|EFH43864.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata]
Length = 1078
Score = 1378 bits (3566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 712/1101 (64%), Positives = 848/1101 (77%), Gaps = 51/1101 (4%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
MGKQKQQ ISRFFAPK T + P P TPPPKI+ATVSFSP+KRK++S
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTQEPN---PVPESSTPPPKISATVSFSPSKRKLLSDHLAA 57
Query: 61 KTPKKPKLSPHTLNPIPTPS-------------------SQTTHNKKYTPLEQQVVELKT 101
+PKKPKLSPHT NPIP P+ ++ ++KYTPLEQQVVELK
Sbjct: 58 ASPKKPKLSPHTQNPIPDPNLHQRFLQRFLEPSPEESVPETSSSSRKYTPLEQQVVELKR 117
Query: 102 KYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAG 161
KYPDV+LM+EVGY++RFFGEDAE+AA+VLGIYAH+DH+FMTAS+PTFRLN HVRRLVNAG
Sbjct: 118 KYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASVPTFRLNFHVRRLVNAG 177
Query: 162 FKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCG---GESNY 218
+K+GVVKQTETAAIK+HG ++GPF RGLSALYTKATLEAAED+ GG G +SN+
Sbjct: 178 YKIGVVKQTETAAIKSHGANRSGPFFRGLSALYTKATLEAAEDISGGGGGEEGFGAQSNF 237
Query: 219 LVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSL 278
LVCVVD+ N G+ FDVR+GVV VEISTG+VVYGEFND F+RSGLEAV+LS
Sbjct: 238 LVCVVDERVNT---ETGI-EMSFDVRVGVVGVEISTGEVVYGEFNDNFMRSGLEAVILSF 293
Query: 279 SPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTL 338
SPAELLLGQPLS++TEK LLA+AGP SN+RVE AS D F G A+ EV+SL E + L
Sbjct: 294 SPAELLLGQPLSQKTEKFLLAHAGPTSNIRVERASLDRFGNGNAVDEVISLCEKISASNL 353
Query: 339 SNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLS 398
++++ ++ E+G + IMNMP L VQALAL HLKQFG ERI+ GASFRSLS
Sbjct: 354 EDDKEIKVEAAEEGMSCLTVHTIMNMPHLTVQALALIFCHLKQFGFERILYQGASFRSLS 413
Query: 399 GSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLI 458
S EMTLSANTLQQLEV+RNNS+GSE G+L H MNHTLT+YGSRLLR WVTHPLC+RNLI
Sbjct: 414 SSTEMTLSANTLQQLEVVRNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCNRNLI 473
Query: 459 SARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRG 518
SARLDAVSEIA MGS+ +S++ + E S+ TIV P+FY +LSSVLT+L RS DIQRG
Sbjct: 474 SARLDAVSEIAACMGSHSSSQNSDELVEDGSERTIVSPEFYLVLSSVLTALSRSSDIQRG 533
Query: 519 ITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI--DGEYREKVTSKTLHSALLKRLILTA 576
ITRIFHRTA +EFIAVM+AIL AGKQ ++L I D E R + S T+ S+LLK+LI A
Sbjct: 534 ITRIFHRTAKATEFIAVMEAILLAGKQFKRLGIKQDCEMR-SMQSATVQSSLLKKLISVA 592
Query: 577 SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
+SPAV+ AAKLLS +NKE A +GDLL+++I S+ QF E+A AR+AV KE+LDSLI+
Sbjct: 593 ASPAVVDNAAKLLSALNKEGAVRGDLLDILITSSDQFPELAEARQAVLVIKEKLDSLISS 652
Query: 637 CRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLAL 696
RK+L +RNLEF+ VSGITHLIELP + KVP+NW KVNSTKKTIRYH PE++ LD+LAL
Sbjct: 653 FRKKLAIRNLEFLQVSGITHLIELPVDAKVPMNWVKVNSTKKTIRYHPPEIVAGLDELAL 712
Query: 697 ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDD 756
A E L IV RA+WDSFL+ F YY +FQAAVQALAALDCLH+LATLS+NK +V PVFVDD
Sbjct: 713 ATEHLAIVNRASWDSFLESFSRYYTDFQAAVQALAALDCLHSLATLSKNKKYVCPVFVDD 772
Query: 757 HEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIG 816
EPV+I+I SGRHPVL+T+L DNFVPNDT+LHAE EYCQIITGPNMGGKSCYIRQVALI
Sbjct: 773 CEPVEINIQSGRHPVLETLLQDNFVPNDTSLHAEGEYCQIITGPNMGGKSCYIRQVALIS 832
Query: 817 IMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVI 876
IMAQVGSFVPASS +LHVLDG++TRMGASDSIQ GRSTFLEEL+EAS+I+R C+++SLVI
Sbjct: 833 IMAQVGSFVPASSVKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVI 892
Query: 877 VDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL 936
+DELGRGTSTHDGVAIAYATL +LL K+C+VLFVTHYP+IA+I F GSVGTYHVSYL
Sbjct: 893 LDELGRGTSTHDGVAIAYATLQHLLLEKRCLVLFVTHYPEIAEISNGFRGSVGTYHVSYL 952
Query: 937 TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
TS K D DVTYLYK+V G+ SFGFKVAQLAQ+P SCI RA + AKLEAE
Sbjct: 953 TSQKKKSGFD---HDDVTYLYKLVRGLCSRSFGFKVAQLAQIPSSCIRRAISMGAKLEAE 1009
Query: 997 VSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRVEASEDLISAYRDLFLNLKF 1056
V +R +N ++ + E + P G +E+ ISA DLF +LKF
Sbjct: 1010 VGARERN--------TRMGEAEGHEEHGAP--------GDWTGAEESISALGDLFADLKF 1053
Query: 1057 ATHDDNPAKSFQFLKHARSIA 1077
A +++P K+F+FL HA IA
Sbjct: 1054 ALSEEDPWKAFEFLNHAWKIA 1074
>gi|449446175|ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 1094
Score = 1373 bits (3555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/1117 (63%), Positives = 849/1117 (76%), Gaps = 57/1117 (5%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKR----KVVSS 56
MGKQKQQVISRFFAPK + SSS+SSP K++ATV+FSP+KR + S
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSLSSSSSSPA--------KVSATVTFSPSKRLISSAIASQ 52
Query: 57 LFPPKTPKKPKLSPHTLNPIPTPSSQTTHNK----------------------------- 87
L PPK+ K+PKLSPHT NP+P+ + + H +
Sbjct: 53 LTPPKSSKRPKLSPHTHNPLPSIPNPSLHQRFLDKLLEPTDDSFQPSNQNPRTSNGADPK 112
Query: 88 -KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
KYTPLEQQVV+LK +YPDVLLM+EVGY++RFFG+DA +AA+VLGIYAHLDHNFMTASIP
Sbjct: 113 YKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYAHLDHNFMTASIP 172
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
TFRLNVHVRRLV+AG+KVGVVKQTETAAIKAHG K GPF RGLSALYTKATLEAA+D+G
Sbjct: 173 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQDLG 232
Query: 207 GGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGF 266
G E+GC GESNYL C+V++ +V + + +G DV++G+VA+EISTGDV+YGE++D F
Sbjct: 233 GAEEGCAGESNYLFCLVENSMSVQNV-DCRIENGVDVKIGMVAMEISTGDVIYGEYDDNF 291
Query: 267 LRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEV 326
+R+GLEA+LLSLSPAELLLG P+SK TEK+LL YAGPA NVRVE S DCF G ALAEV
Sbjct: 292 MRNGLEAMLLSLSPAELLLGDPISKPTEKLLLGYAGPALNVRVERVSGDCFKDGSALAEV 351
Query: 327 MSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER 386
MSLYEN+ ++ + + + + Q ++RSAI+ I+NMP+LA+QALALTIRHLKQFGLER
Sbjct: 352 MSLYENIDQNNFTEDNNPEKVLVGQKSNRSAIKEIVNMPNLALQALALTIRHLKQFGLER 411
Query: 387 IMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
I+ L +SFR S MEMTLS NTL QLEVL+NN +GSE G+LLH MNHTLTI+GSRLLR+
Sbjct: 412 IVSLASSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETGSLLHCMNHTLTIFGSRLLRQ 471
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
W+THPLCDRN+I AR +AVSEIA SM S + S + DE+ SDV ++EP+ YILSSVL
Sbjct: 472 WITHPLCDRNMIIARQEAVSEIAASMVSSKVSPNNRALDEEYSDVIVIEPELNYILSSVL 531
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHS 566
T+LGR+PDIQRGITRIFHRTA PSEFIAV+QAIL+AGKQLQQ HID E + + S
Sbjct: 532 TTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILFAGKQLQQFHIDEEDDNCSSESIIGS 591
Query: 567 ALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSA 626
LL++LIL+ASS +I AAKLLST++KEAADQGD NLMII + QF +VARARK QSA
Sbjct: 592 KLLRKLILSASSSGLINIAAKLLSTISKEAADQGDFPNLMIIYSDQFPKVARARKEAQSA 651
Query: 627 KEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPE 686
+E+LD+LI RKQLGMR LEF SVSG THLIEL + KVP W K+NSTKKT+RYH PE
Sbjct: 652 REKLDALITFYRKQLGMRKLEFTSVSGTTHLIELAIDVKVPSQWVKINSTKKTVRYHPPE 711
Query: 687 VLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNK 746
VL ALD+L+LANEEL + R AWD FL+ F YYAEFQAAVQALA++DCL++LA LSRNK
Sbjct: 712 VLAALDELSLANEELMVASRDAWDDFLRGFSRYYAEFQAAVQALASIDCLYSLAILSRNK 771
Query: 747 NFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKS 806
N+ RP FV D EP QIH+CSGRHPVL+ L NFVPNDTNL A E+CQI+TGPNMGGKS
Sbjct: 772 NYARPEFVPDDEPAQIHLCSGRHPVLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKS 831
Query: 807 CYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYIL 866
CYIRQVALI +M+QVGSFVPA SA+LHVLDGIYTRMGASDSIQQGRSTFLEE+ E S+IL
Sbjct: 832 CYIRQVALIALMSQVGSFVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHIL 891
Query: 867 RNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTG 926
R+ +++SLVI+DELGRGTSTHDGVAIAYA L LL+ KKC+VLFVTHYPK+A+I +F
Sbjct: 892 RHSSSRSLVIIDELGRGTSTHDGVAIAYAALHSLLQQKKCLVLFVTHYPKVAEIAKEFPA 951
Query: 927 SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRA 986
S G YHVSYLTSHK KS +DVTYLYK++ GV+ESSFGFKVAQLAQ+P SCI+RA
Sbjct: 952 SAGVYHVSYLTSHKSPSLSGPKSTEDVTYLYKLISGVAESSFGFKVAQLAQIPLSCIARA 1011
Query: 987 TVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRVEASEDLISA 1046
T + LE V+ R Q +S ++ L + S + E Q S +SF + I
Sbjct: 1012 TEMGVWLEEIVTRRAQRKSTEQH-LAEASVKGLEWQ-----SFQSFL--------ERIDG 1057
Query: 1047 YRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELIIR 1083
Y + FL LK + + ARS+A +L+ R
Sbjct: 1058 YEEFFLFLKATVRSADVGTWCHQIYQARSMAMDLLGR 1094
>gi|7269404|emb|CAB81364.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 1076
Score = 1301 bits (3368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/1140 (60%), Positives = 819/1140 (71%), Gaps = 126/1140 (11%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
MGKQKQQ ISRFFAPK T +P TPPPKI+ATVSFSP+KRK++S
Sbjct: 1 MGKQKQQTISRFFAPKPKSPT---HEPNPVAESSTPPPKISATVSFSPSKRKLLSDHLAA 57
Query: 61 KTPKKPKLSPHTLNPIPTPS------------------SQTTHNKKYTPLEQQVVELKTK 102
+PKKPKLSPHT NP+P P+ +T+ ++KYTPLEQQVVELK+K
Sbjct: 58 ASPKKPKLSPHTQNPVPDPNLHQRFLQRFLEPSPEEYVPETSSSRKYTPLEQQVVELKSK 117
Query: 103 YPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGF 162
YPDV+LM+EVGY++RFFGEDAE+AA+VLGIYAH+DHNFMTA G+
Sbjct: 118 YPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTA-----------------GY 160
Query: 163 KVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCG---GESNYL 219
K+GVVKQTETAAIK+HG + GPF RGLSALYTKATLEAAED+ GG G +SN+L
Sbjct: 161 KIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDISGGCGGEEGFGSQSNFL 220
Query: 220 VCVVDDDGNVGKIRNGVFGDG----FDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVL 275
VCVVD+ ++++ G G FDVR+GVV VEISTG+VVY EFND F+RSGLEAV+
Sbjct: 221 VCVVDE-----RVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFNDNFMRSGLEAVI 275
Query: 276 LSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGE 335
LSLSPAELLLGQPLS+QTEK L+A+AGP SNVRVE AS DCF G A+ EV+SL E +
Sbjct: 276 LSLSPAELLLGQPLSQQTEKFLVAHAGPTSNVRVERASLDCFSNGNAVDEVISLCEKISA 335
Query: 336 DTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR 395
L ++++ ++ E+G ++ IMNMP L VQALALT HLKQFG ERI+ GASFR
Sbjct: 336 GNLEDDKEMKLEAAEKGMSCLTVQTIMNMPHLTVQALALTFCHLKQFGFERILYQGASFR 395
Query: 396 SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDR 455
SLS + EMTLSANTLQQLEV++NNS+GSE G+L H MNHTLT+YGSRLLR WVTHPLCDR
Sbjct: 396 SLSSNTEMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDR 455
Query: 456 NLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDI 515
NLISARLDAVSEI+ MGS+ +S+ + E+ S+ IV P+FY +LSSVLT++ RS DI
Sbjct: 456 NLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDI 515
Query: 516 QRGITRIFHRTATPSE------------------------------FIAVMQAILYAGKQ 545
QRGITRIFHRTA +E FIAVM+AIL AGKQ
Sbjct: 516 QRGITRIFHRTAKATEVKIWPVLCPLMYVPGSSSPGLRVLNFLDEKFIAVMEAILLAGKQ 575
Query: 546 LQQLHI--DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+Q+L I D E R + S T+ S LL++LI SSP V+ A KLLS +NKEAA +GDLL
Sbjct: 576 IQRLGIKQDSEMR-SMQSATVRSTLLRKLISVISSPVVVDNAGKLLSALNKEAAVRGDLL 634
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
+++I S+ QF E+A AR+AV +E+LDS I RK+L +RNLEF+ VSGITHLIELP +
Sbjct: 635 DILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIELPVD 694
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
KVP+NW KVNSTKKTIRYH PE++ LD+LALA E L IV RA+WDSFLK F YY +F
Sbjct: 695 SKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDF 754
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
+AAVQALAALDCLH+L+TLSRNKN+VRP FVDD EPV+I+I SGRHPVL+TIL DNFVPN
Sbjct: 755 KAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVPN 814
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT LHAE EYCQIITGPNMGGKSCYIRQVALI IMAQVGSFVPAS A+LHVLDG++TRMG
Sbjct: 815 DTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMG 874
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASDSIQ GRSTFLEEL DELGRGTSTHDGVAIAYATL +LL
Sbjct: 875 ASDSIQHGRSTFLEEL------------------DELGRGTSTHDGVAIAYATLQHLLAE 916
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K+C+VLFVTHYP+IA+I F GSVGTYHVSYLT K G D DVTYLYK+V G+
Sbjct: 917 KRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKDKGSYD---HDDVTYLYKLVRGL 973
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQE 1023
SFGFKVAQLAQ+PPSCI RA +AAKLEAEV +R +N E E E
Sbjct: 974 CSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARERNTRMG----------EPEGHE 1023
Query: 1024 NMPVSPESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELIIR 1083
+E+ ISA DLF +LKFA +++P K+F+FLKHA IA ++ ++
Sbjct: 1024 E------------PRGAEESISALGDLFADLKFALSEEDPWKAFEFLKHAWKIAGKIRLK 1071
>gi|2980796|emb|CAA18172.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 1076
Score = 1297 bits (3357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/1140 (60%), Positives = 817/1140 (71%), Gaps = 126/1140 (11%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
MGKQKQQ ISRFFAPK T + P TPPPKI+ATVSFSP+KRK++S
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTHEPN---PVAESSTPPPKISATVSFSPSKRKLLSDHLAA 57
Query: 61 KTPKKPKLSPHTLNPIPTPS------------------SQTTHNKKYTPLEQQVVELKTK 102
+PKKPKLSPHT NP+P P+ +T+ ++KYTPLEQQVVELK+K
Sbjct: 58 ASPKKPKLSPHTQNPVPDPNLHQRFLQRFLEPSPEEYVPETSSSRKYTPLEQQVVELKSK 117
Query: 103 YPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGF 162
YPDV+LM+EVGY++RFFGEDAE+AA+VLGIYAH+DHNFMTA +
Sbjct: 118 YPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTAR-----------------Y 160
Query: 163 KVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCG---GESNYL 219
K+GVVKQTETAAIK+HG + GPF RGLSALYTKATLEAAED+ GG G +SN+L
Sbjct: 161 KIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDISGGCGGEEGFGSQSNFL 220
Query: 220 VCVVDDDGNVGKIRNGVFGDG----FDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVL 275
VCVVD+ ++++ G G FDVR+GVV VEISTG+VVY EFND F+RSGLEAV+
Sbjct: 221 VCVVDE-----RVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFNDNFMRSGLEAVI 275
Query: 276 LSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGE 335
LSLSPAELLLGQPLS+QTEK L+A+AGP SNVRVE AS DCF G A+ EV+SL E +
Sbjct: 276 LSLSPAELLLGQPLSQQTEKFLVAHAGPTSNVRVERASLDCFSNGNAVDEVISLCEKISA 335
Query: 336 DTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR 395
L ++++ ++ E+G + IMNMP L VQALALT HLKQFG ERI+ GASFR
Sbjct: 336 GNLEDDKEMKLEAAEKGMSCLTVHTIMNMPHLTVQALALTFCHLKQFGFERILYQGASFR 395
Query: 396 SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDR 455
SLS + EMTLSANTLQQLEV++NNS+GSE G+L H MNHTLT+YGSRLLR WVTHPLCDR
Sbjct: 396 SLSSNTEMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDR 455
Query: 456 NLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDI 515
NLISARLDAVSEI+ MGS+ +S+ + E+ S+ IV P+FY +LSSVLT++ RS DI
Sbjct: 456 NLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDI 515
Query: 516 QRGITRIFHRTATPSE------------------------------FIAVMQAILYAGKQ 545
QRGITRIFHRTA +E FIAVM+AIL AGKQ
Sbjct: 516 QRGITRIFHRTAKATEVKIWPVLCPLMYVPVSSSPGLRVLNFLDEKFIAVMEAILLAGKQ 575
Query: 546 LQQLHI--DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+Q+L I D E R + S T+ S LL++LI SSP V+ A KLLS +NKEAA +GDLL
Sbjct: 576 IQRLGIKQDSEMR-SMQSATVRSTLLRKLISVISSPVVVDNAGKLLSALNKEAAVRGDLL 634
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
+++I S+ QF E+A AR+AV +E+LDS I RK+L +RNLEF+ VSGITHLIELP +
Sbjct: 635 DILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIELPVD 694
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
KVP+NW KVNSTKKTIRYH PE++ LD+LALA E L IV RA+WDSFLK F YY +F
Sbjct: 695 SKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDF 754
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
+AAVQALAALDCLH+L+TLSRNKN+VRP FVDD EPV+I+I SGRHPVL+TIL DNFVPN
Sbjct: 755 KAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVPN 814
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT LHAE EYCQIITGPNMGGKSCYIRQVALI IMAQVGSFVPAS A+LHVLDG++TRMG
Sbjct: 815 DTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMG 874
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASDSIQ GRSTFLEELN ELGRGTSTHDGVAIAYATL +LL
Sbjct: 875 ASDSIQHGRSTFLEELN------------------ELGRGTSTHDGVAIAYATLQHLLAE 916
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K+C+VLFVTHYP+IA+I F GSVGTYHVSYLT K G D DVTYLYK+V G+
Sbjct: 917 KRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKDKGSYD---HDDVTYLYKLVRGL 973
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQE 1023
SFGFKVAQLAQ+PPSCI RA +AAKLEAEV +R +N E E E
Sbjct: 974 CSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARERNTRMG----------EPEGHE 1023
Query: 1024 NMPVSPESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELIIR 1083
+E+ ISA DLF +LKFA +++P K+F+FLKHA IA ++ ++
Sbjct: 1024 E------------PRGAEESISALGDLFADLKFALSEEDPWKAFEFLKHAWKIAGKIRLK 1071
>gi|449523049|ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 966
Score = 1284 bits (3323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/967 (65%), Positives = 759/967 (78%), Gaps = 44/967 (4%)
Query: 1 MGKQKQQVISRFFAPKSNQTTAS--------SSASSPRPPQQT-PPPKIAATVSFSPAKR 51
MGKQKQQVISRFFAPK + S ++A+ PP Q P K++ATV+FSP+KR
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSLSSSSSSSSSATAADITPPTQPFSPAKVSATVTFSPSKR 60
Query: 52 ----KVVSSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNK-------------------- 87
+ S L PPK+ K+PKLSPHT NP+P+ + + H +
Sbjct: 61 LISSAIASQLTPPKSSKRPKLSPHTHNPLPSIPNPSLHQRFLDRLLEPTDDSFQPSNQNP 120
Query: 88 ----------KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLD 137
KYTPLEQQVV+LK +YPDVLLM+EVGY++RFFG+DA +AA+VLGIYAHLD
Sbjct: 121 RTSNGADPKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYAHLD 180
Query: 138 HNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKA 197
HNFMTASIPTFRLNVHVRRLV+AG+KVGVVKQTETAAIKAHG K GPF RGLSALYTKA
Sbjct: 181 HNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKA 240
Query: 198 TLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
TLEAA+D+GG E+GC GESNYL C+V++ +V + + +G DV++G+VA+EISTGDV
Sbjct: 241 TLEAAQDLGGAEEGCAGESNYLFCLVENSMSVQNV-DCRIENGVDVKIGMVAMEISTGDV 299
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
+YGE++D F+R+GLEA+LLSLSPAELLLG P+SK TEK+LL YAGPA NVRVE S D F
Sbjct: 300 IYGEYDDNFMRNGLEAMLLSLSPAELLLGDPISKPTEKLLLGYAGPALNVRVERVSGDFF 359
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
G ALAEVMSLYEN+ ++ + + + Q ++RSAI+ I+NMP+LA+QALALTIR
Sbjct: 360 KDGSALAEVMSLYENIDQNNFTEDNSPEKVLVGQKSNRSAIKEIVNMPNLALQALALTIR 419
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
HLKQFGLERI+ L +SFR S MEMTLS NTL QLEVL+NN +GSE G+LLH MNHTLT
Sbjct: 420 HLKQFGLERIVSLASSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETGSLLHCMNHTLT 479
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
I+GSRLLR+W+THPLCDRN+I AR +AVSEIA SM S + S + DE+ SDV ++EP+
Sbjct: 480 IFGSRLLRQWITHPLCDRNMIIARQEAVSEIAASMVSSKVSPNNRALDEEYSDVIVIEPE 539
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
YILSSVLT+LGR+PDIQRGITRIFHRTA PSEFIAV+QAIL+AGKQLQQ HID E
Sbjct: 540 LNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILFAGKQLQQFHIDEEDDN 599
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
+ + S LL++LIL+ASS +I AAKLLST++KEAADQGD NLMII + QF +VA
Sbjct: 600 CSSESIIGSKLLRKLILSASSSGLINIAAKLLSTISKEAADQGDFPNLMIIYSDQFPKVA 659
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTK 677
RARK QSA+E+LD+LI RKQLGMR LEF SVSG THLIEL + KVP W K+NSTK
Sbjct: 660 RARKEAQSAREKLDALITFYRKQLGMRKLEFTSVSGTTHLIELAIDVKVPSQWVKINSTK 719
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
KT+RYH PEVL ALD+L+LANEEL + R AWD FL+ F YYAEFQAAVQALA++DCL+
Sbjct: 720 KTVRYHPPEVLAALDELSLANEELMVASRDAWDDFLRGFSRYYAEFQAAVQALASIDCLY 779
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQII 797
+LA LSRNKN+ RP FV D EP QI ICSGRHPVL+ L NFVPNDTNL A E+CQI+
Sbjct: 780 SLAILSRNKNYARPEFVPDDEPAQIRICSGRHPVLEGTLQGNFVPNDTNLDANGEHCQIV 839
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNMGGKSCYIRQVALI +M+QVGSFVPA SA+LHVLDGIYTRMGASDSIQQGRSTFLE
Sbjct: 840 TGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLE 899
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
E+ E S+ILR+ +++SLVI+DELGRGTSTHDGVAIAYA L LL+ KKC+VLFVTHYPK+
Sbjct: 900 EMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAALHSLLQQKKCLVLFVTHYPKV 959
Query: 918 ADIKTKF 924
A+I +F
Sbjct: 960 AEIAKEF 966
>gi|297741050|emb|CBI31781.3| unnamed protein product [Vitis vinifera]
Length = 903
Score = 1273 bits (3293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/921 (70%), Positives = 748/921 (81%), Gaps = 57/921 (6%)
Query: 109 MIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVK 168
M+EVGY++RFFGEDAE+AA+VLGIYAH+DHNF+TASIPTFRLNVHVRRLV+AGFKVGVVK
Sbjct: 1 MVEVGYRYRFFGEDAEIAARVLGIYAHVDHNFLTASIPTFRLNVHVRRLVSAGFKVGVVK 60
Query: 169 QTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN 228
QTETAAIKAHG K GPF RGLSALYTKATLEAAE+VGGGE+ CG +NYLVCVV+ +
Sbjct: 61 QTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAEEVGGGEEECGSYNNYLVCVVEKGIS 120
Query: 229 VGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP 288
V ++ G GFDVR+G+VAVE+STGDVV+GEFND F+R+GLEAV+LS+SPAELLLG P
Sbjct: 121 VENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGEFNDNFMRAGLEAVILSMSPAELLLGYP 180
Query: 289 LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
LSKQTEK+LLAYAGPASNVRVE SRDCF GGALAEVMSLYEN+ E++ ++++ N +V
Sbjct: 181 LSKQTEKLLLAYAGPASNVRVERTSRDCFSDGGALAEVMSLYENLSENSRADHQVDNTEV 240
Query: 349 PEQGNHRSAIE--------------------GIMNMPDLAVQALALTIRHLKQFGLERIM 388
EQ NH AIE GIM+MPDLAVQALALTIRHLKQFGLERI+
Sbjct: 241 MEQENHCLAIEPPTTSYVKFVSVHYGSGIALGIMSMPDLAVQALALTIRHLKQFGLERIL 300
Query: 389 CLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWV 448
C+GASFR S +MEMTLSAN LQQLEVL N+S+GSE G+LLH MNHTLTI+GSRLLR WV
Sbjct: 301 CMGASFRPFSSNMEMTLSANALQQLEVLNNHSDGSESGSLLHTMNHTLTIFGSRLLRHWV 360
Query: 449 THPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTS 508
+HPLCD N+ISARLDAVSEI SMGS + S++
Sbjct: 361 SHPLCDSNMISARLDAVSEIVMSMGSCKASQN---------------------------- 392
Query: 509 LGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID-GEYREKVTSKTLHSA 567
GRSPDIQRG+TRIFHRTAT SEFI+V QAIL+AGKQLQ+LHI+ + EK S+++ S
Sbjct: 393 FGRSPDIQRGLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQSRSVRSV 452
Query: 568 LLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAK 627
LL++LILTASS +IG AAKLLST+NKEAAD+GDL NL IIS+GQF EVA+AR VQSAK
Sbjct: 453 LLRKLILTASSSGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQFPEVAKARSLVQSAK 512
Query: 628 EELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEV 687
E+LD LI + RKQL M NLEFMSVSG THLIELP + KVP NW KVNSTKKT+RYH PEV
Sbjct: 513 EKLDLLIGLYRKQLRMNNLEFMSVSGTTHLIELPVDVKVPSNWVKVNSTKKTVRYHPPEV 572
Query: 688 LTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN 747
L+ALDQL+LANEEL I CR AWDSFL+ F Y++EFQAAVQALA LDCLH+LA LSRNKN
Sbjct: 573 LSALDQLSLANEELMIACRGAWDSFLRAFDKYFSEFQAAVQALATLDCLHSLAILSRNKN 632
Query: 748 FVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSC 807
+VRPVFV D EPVQ+HICSGRHPVL+T+L DNFVPNDTNLHA+ EYC+I+TGPNMGGKSC
Sbjct: 633 YVRPVFVGDSEPVQMHICSGRHPVLETVLQDNFVPNDTNLHADGEYCEIVTGPNMGGKSC 692
Query: 808 YIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILR 867
YIRQVALI IMAQVGSFVPASSA+L VLDGI+TRMG+SDSIQQGRSTFLEEL+EAS+I+
Sbjct: 693 YIRQVALIAIMAQVGSFVPASSAKLCVLDGIHTRMGSSDSIQQGRSTFLEELSEASHIIH 752
Query: 868 NCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGS 927
NCT++SLVI+DELGRGTSTHDGVAIAYATL YLLEHK+CMVLFVTHYPKI +
Sbjct: 753 NCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPKIR--------A 804
Query: 928 VGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
+ + T K + +DVTYLYK+VPGVSE SFGFKVAQLAQLP SCI RA
Sbjct: 805 MDMDTDTDKTDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRAN 864
Query: 988 VIAAKLEAEVSSRVQNRSAKR 1008
V+AA+LEA + SRV+N SA++
Sbjct: 865 VMAAELEAMIVSRVKNSSAQK 885
>gi|32488645|emb|CAE03438.1| OSJNBa0032F06.21 [Oryza sativa Japonica Group]
Length = 1085
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1106 (56%), Positives = 781/1106 (70%), Gaps = 49/1106 (4%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
MGK KQQV+SRFF+PK + +++ P PP+ P +AA VSFSPAKR S+ P
Sbjct: 1 MGKPKQQVLSRFFSPKPRPSAPATADDPPPPPRPPAEPPVAAVVSFSPAKRARALSVSPK 60
Query: 61 KTPKKPKLSPHTLNPIPTP----------SSQTTHNKKYTPLEQQVVELKTKYPDVLLMI 110
T K+ K SP + + ++ K YTPLEQQVV+LK ++PDVLLM+
Sbjct: 61 TTAKRAKPSPPPSDYVRRRLLEPPRPPPPAAVNPSGKAYTPLEQQVVDLKARHPDVLLMV 120
Query: 111 EVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQT 170
EVGY+FRFFGEDA +AA VLGI AH DH+F+TASIPTFRL HVRRLV AG KVGVV+QT
Sbjct: 121 EVGYRFRFFGEDAAVAASVLGIIAHPDHSFLTASIPTFRLGFHVRRLVAAGHKVGVVRQT 180
Query: 171 ETAAIKAHGPGKAG--PFGRGLSALYTKATLEAA--EDVGGGEDGCGGESNYLVCVVDDD 226
ETAAIKA G A PF RGLSA+YT+AT+EAA E GGG G S YLVCVVD
Sbjct: 181 ETAAIKAAHGGGAAGTPFARGLSAVYTRATIEAAAGELEGGGAPDEG--SRYLVCVVD-- 236
Query: 227 GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLG 286
K + + +GF+V++GVVA+E+STG+VV+GEF DG R+GLEAVLL L+P E++LG
Sbjct: 237 ----KEVDAMGTEGFEVKIGVVAIEVSTGEVVHGEFMDGVSRNGLEAVLLGLAPVEVILG 292
Query: 287 QPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLS-NNEDQN 345
P+S TEK+++AYAGP SNVRVE SR CF GGALAE++SL+E G D + N
Sbjct: 293 TPISSATEKLMVAYAGPTSNVRVERTSRLCFSEGGALAELLSLFEKSGVDAPTVENGRHL 352
Query: 346 MDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTL 405
M++ E+ N+ IEGIM MP+L + ALAL++R+LK FG++RI+C G+SF+ + + EM+L
Sbjct: 353 MEMNEENNNPRGIEGIMAMPELVIHALALSVRYLKGFGMDRIICFGSSFQPFTANTEMSL 412
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
SANTLQQLEVL+N+S+GS G+L MN+T T +GSRL R W+THPLCDRN I R DAV
Sbjct: 413 SANTLQQLEVLKNHSDGSLDGSLFQTMNNTCTAFGSRLFRHWLTHPLCDRNQICTRHDAV 472
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
SEI+ES+GS + S + Q + S + V ILSSVL L + DIQRGITRIFH
Sbjct: 473 SEISESIGSQQYSTNNLQDEVDMSCSSSVRSDLSTILSSVLRMLAGTLDIQRGITRIFHC 532
Query: 526 TATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
AT EF+ V+QAIL AGKQLQ+L ++ +T+HS LL+RLI TASS V+ A
Sbjct: 533 KATAKEFVGVVQAILTAGKQLQKLVLEDTDTMSSQHRTVHSPLLRRLINTASSCTVLANA 592
Query: 586 AKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
A L+S +NK+AADQGD+LNL I S QF EVA V+ AK++L+ LI RKQLG+RN
Sbjct: 593 ATLVSCLNKDAADQGDMLNLFIASVDQFPEVAEGHATVEMAKQKLELLITEYRKQLGVRN 652
Query: 646 LEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
LEF +V+G THLIELP + KVP +W KVNSTKKTIRYH+PEV L+ L LA E+L ++C
Sbjct: 653 LEFKTVAGTTHLIELPVDRKVPSSWMKVNSTKKTIRYHTPEVSKNLENLLLAKEKLAVIC 712
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHIC 765
R W++FL +FG YYA+FQA V++LA LDCL++LATL++ +VRP FV ++E QIHI
Sbjct: 713 RTTWNNFLMDFGRYYAQFQATVKSLATLDCLYSLATLAKQNKYVRPNFVRENEASQIHIK 772
Query: 766 SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
GRHPVL+++L NFVPNDT LHA EYCQI+TGPNMGGKSCYIRQVALI +MAQVGSFV
Sbjct: 773 DGRHPVLESLLGVNFVPNDTELHANSEYCQIVTGPNMGGKSCYIRQVALITLMAQVGSFV 832
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PASSA LH +DGIYTRMGASDSIQ G STF EEL+EAS IL NC+++SLVI+DELGRGTS
Sbjct: 833 PASSATLHAVDGIYTRMGASDSIQHGTSTFYEELSEASNILHNCSSRSLVIIDELGRGTS 892
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK----- 940
THDGVAIAYATL YLL+ KKCMV+FVTHYPKI +I +F GSVG YHVSYL + K
Sbjct: 893 THDGVAIAYATLHYLLKEKKCMVIFVTHYPKILNILREFEGSVGAYHVSYLATRKLLEVA 952
Query: 941 ----VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
V+ ++K ++T+LYK+V G S+ SFG VA LAQLP SCI RA+V+AAKL+ E
Sbjct: 953 DRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIERASVMAAKLQQE 1012
Query: 997 VSSRVQNRSAKRDLLVKLSDQEQEAQ-ENMPVSPESFYLGRVEASEDLISAYRDLFLNLK 1055
+S R +N+ +L D +E+ + + P Y G EA +R LF N+
Sbjct: 1013 LSEREKNK------FCRLMDVPRESSPKELCAQP---YQGLAEA------CHRILF-NVT 1056
Query: 1056 FATHDDNPAKSFQFLKHARSIAKELI 1081
A +D + L+ AR IA + I
Sbjct: 1057 SAQSNDELTDTLSSLREAREIALKAI 1082
>gi|218195849|gb|EEC78276.1| hypothetical protein OsI_17972 [Oryza sativa Indica Group]
Length = 2246
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/1126 (54%), Positives = 765/1126 (67%), Gaps = 86/1126 (7%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
MGK KQQV+SRFF+PK + +++ P PP+ P +AA VSFSPAKR S+ P
Sbjct: 1 MGKPKQQVLSRFFSPKPRPSAPATADDPPPPPRPPAEPPVAAVVSFSPAKRARALSVSPK 60
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTT----------HNKKYTPLEQQVVELKTKYPDVLLMI 110
T K+ K SP + + + K YTPLEQQVV+LK ++PDVLLM+
Sbjct: 61 TTAKRAKPSPPPSDYVRRRLLEPPRPPPPAALNPSGKGYTPLEQQVVDLKARHPDVLLMV 120
Query: 111 EVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQT 170
EVGY+FRFFGEDA +AA VLGI AH DH+F+TASIPTFRL HVRRLV AG KVGVV+QT
Sbjct: 121 EVGYRFRFFGEDAAVAASVLGIIAHPDHSFLTASIPTFRLGFHVRRLVAAGHKVGVVRQT 180
Query: 171 ETAAIKAHGPGKAG--PFGRGLSALYTKATLEAA--EDVGGGEDGCGGESNYLVCVVDDD 226
ETAAIKA G A PF RGLSA+YT+AT+EAA E GGG G S YLVCVVD
Sbjct: 181 ETAAIKAAHGGGAAGTPFARGLSAVYTRATIEAAAGELEGGGAPDEG--SRYLVCVVD-- 236
Query: 227 GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLG 286
K + + +GF+V++GVVA+E+STG+VV+GEF DG R+GLEAVLL L+P E++LG
Sbjct: 237 ----KEVDAMGTEGFEVKIGVVAIEVSTGEVVHGEFMDGVSRNGLEAVLLGLAPVEVILG 292
Query: 287 QPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLS-NNEDQN 345
P+S TEK+++AYAGP SNVRVE SR CF GGALAE++SL+E G D + N
Sbjct: 293 TPISSATEKLMVAYAGPTSNVRVERTSRLCFSEGGALAELLSLFEKSGVDAPTVENGRHL 352
Query: 346 MDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTL 405
M++ E+ N+ IEGIM MP+L + ALAL++R+LK FG++RI+C G+SF+ + + EM+L
Sbjct: 353 MEMNEENNNPRGIEGIMAMPELVIHALALSVRYLKGFGMDRIICFGSSFQPFTANTEMSL 412
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
SANTLQQLEVL+N+S+GS G+L MN+T T +GSRL R W+THPLCDRN I R DAV
Sbjct: 413 SANTLQQLEVLKNHSDGSLDGSLFQTMNNTCTAFGSRLFRHWLTHPLCDRNQICTRHDAV 472
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
SEI+ES+GS + S + Q + S + V ILSSVL L + DIQRGITRIFH
Sbjct: 473 SEISESIGSQQYSTNNLQDEVDMSCSSSVRSDLSTILSSVLRMLAGTLDIQRGITRIFHC 532
Query: 526 TATP--------------------SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH 565
AT EF+ V+QAIL AGKQLQ+L ++ +T+H
Sbjct: 533 KATAKEGTSNDTPFGLIILVVLDKDEFVGVVQAILTAGKQLQKLVLEDTDTMSSQHRTVH 592
Query: 566 SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQS 625
S LL+RLI TASS V+ AA L+S +NK+AADQGD+LNL I S QF EVA V+
Sbjct: 593 SPLLRRLINTASSCTVLANAATLVSCLNKDAADQGDMLNLFIASVDQFPEVAEGHATVEM 652
Query: 626 AKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSP 685
AK++L+ LI RKQLG LP + KVP +W KVNSTKKTIRYH+P
Sbjct: 653 AKQKLELLITEYRKQLG-----------------LPVDRKVPSSWMKVNSTKKTIRYHTP 695
Query: 686 EVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN 745
EV L+ L LA E+L ++CR W++FL +FG YYA+FQA V++LA LDCL++LATL++
Sbjct: 696 EVSKNLENLLLAKEKLAVICRTTWNNFLMDFGRYYAQFQATVKSLATLDCLYSLATLAKQ 755
Query: 746 KNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGK 805
+VRP FV ++E QIHI GRHPVL+++L NFVPNDT LHA EYCQI+TGPNMGGK
Sbjct: 756 NKYVRPNFVRENEASQIHIKDGRHPVLESLLGVNFVPNDTELHANSEYCQIVTGPNMGGK 815
Query: 806 SCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYI 865
SCYIRQVALI +MAQVGSFVPASSA LH +DGIYTRMGASDSIQ G STF EEL+EAS I
Sbjct: 816 SCYIRQVALITLMAQVGSFVPASSATLHAVDGIYTRMGASDSIQHGTSTFYEELSEASNI 875
Query: 866 LRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFT 925
L NC+++SLVI+DELGRGTSTHDGVAIAYATL YLL+ KKCMV+FVTHYPKI +I +F
Sbjct: 876 LHNCSSRSLVIIDELGRGTSTHDGVAIAYATLHYLLKEKKCMVIFVTHYPKILNILREFE 935
Query: 926 GSVGTYHVSYLTSHK---------VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
GSVG YHVSYL + K V+ ++K ++T+LYK+V G S+ SFG VA LA
Sbjct: 936 GSVGAYHVSYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLA 995
Query: 977 QLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQ-ENMPVSPESFYLG 1035
QLP SCI RA+V+AAKL+ E+S R +N+ +L D +E+ + + P Y G
Sbjct: 996 QLPSSCIERASVMAAKLQQELSEREKNK------FCRLMDVPRESSPKELCAQP---YQG 1046
Query: 1036 RVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELI 1081
EA +R LF N+ A +D + L+ AR IA + I
Sbjct: 1047 LAEA------CHRILF-NVTSAQSNDELTDTLSSLREAREIALKAI 1085
>gi|49615728|gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 846
Score = 1072 bits (2771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/842 (64%), Positives = 660/842 (78%), Gaps = 18/842 (2%)
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STGDVVYGEFND F+R+GLEA++L L PAELL+G+P+SKQTEK+LLAYAGPASNVRVE
Sbjct: 12 STGDVVYGEFNDNFMRAGLEAMILDLLPAELLVGRPISKQTEKLLLAYAGPASNVRVEDV 71
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSN-NEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
S D F GGAL+EVMSLYE + E+ L N +E + +V ++SAI+GI+ MPDLAVQA
Sbjct: 72 SSDRFSDGGALSEVMSLYEGVRENYLLNVHEREEAEVKMHEQNQSAIQGILAMPDLAVQA 131
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
LAL IRHLKQFG+ER++CLGASFR S +MEMTLSAN LQQLEVL+NN +GSE G+L+H
Sbjct: 132 LALIIRHLKQFGMERVLCLGASFRPFSSNMEMTLSANALQQLEVLKNNFDGSESGSLMHC 191
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
MN TLT++GSRLLR WVTHPL DRN+I ARLDAV+EIA+SM + +TS+ + +DV
Sbjct: 192 MNQTLTVFGSRLLRHWVTHPLRDRNMIDARLDAVAEIADSMKTCQTSDL----KVEGADV 247
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
TI +P+ ++++SS L+SLGRSPDIQRGITRIFHR AT SE V+QAIL A KQL QL +
Sbjct: 248 TISQPEIHHLISSALSSLGRSPDIQRGITRIFHRNATASE---VIQAILIAAKQLHQLSL 304
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
+ + + +TL S LL++LI ASS VI AAKLLS +NKEAAD DL NL +IS+G
Sbjct: 305 EEDKSVNLQRQTLRSVLLRKLISIASSSTVINAAAKLLSALNKEAADSRDLHNLFMISDG 364
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWA 671
+F +VA R+ V+ A E+LDSLI + RKQL +RNLE+ SV+GITHLIELP + KVP +W
Sbjct: 365 KFPQVAEGRRRVELANEKLDSLIVVYRKQLHIRNLEYTSVAGITHLIELPLDTKVPPDWV 424
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
KV+STKK IRYH EV+ ALD+LALANE+LT++CR+AW++FL FGGY+AEFQAAVQALA
Sbjct: 425 KVSSTKKAIRYHPSEVVVALDELALANEQLTVICRSAWNNFLAGFGGYFAEFQAAVQALA 484
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAER 791
+LDCL++LA LSRNKN+VRP+FV D E VQIHICSGRHPVL+T+L DNFV NDT+LHAER
Sbjct: 485 SLDCLNSLAILSRNKNYVRPLFVKDDEAVQIHICSGRHPVLETVLQDNFVSNDTDLHAER 544
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
EYCQI+TGPNMGGKSCYIRQVALI +MAQVGSFVPA SA+LHVLDGIYTRMGASDSIQQG
Sbjct: 545 EYCQIVTGPNMGGKSCYIRQVALIALMAQVGSFVPAFSAKLHVLDGIYTRMGASDSIQQG 604
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFV 911
RSTFLEEL+EAS IL+ C+A SLVI+DELGRGTSTHDGVAIA+ATL YLLEHKKCMVLFV
Sbjct: 605 RSTFLEELSEASDILKKCSASSLVILDELGRGTSTHDGVAIAFATLQYLLEHKKCMVLFV 664
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSH-KVMG------PMDSKSDQDVTYLYKVVPGVS 964
THYP+I +K +F GSVG YHVSYLTS V G M+ + +D+TYLYK+ PGV+
Sbjct: 665 THYPEIVSVKNEFPGSVGPYHVSYLTSQGDVTGDCRSNEKMNYINSEDITYLYKLAPGVA 724
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQEN 1024
E SFGFKVAQLAQLP +CI RA VIA +LEA V + + +R + ++ E
Sbjct: 725 ERSFGFKVAQLAQLPVACIQRAIVIAGRLEAAVCNYTEQSRIRRSYSINYRQDGCKSSEP 784
Query: 1025 MP--VSPESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPA-KSFQFLKHARSIAKELI 1081
+ + P G V ++ YR+LFLN+ FA ++N + FQFL A+S+A +LI
Sbjct: 785 VDDVLEPYLSSAGSVNCIDNSSELYRELFLNINFALLEENGGDRRFQFLMQAKSLAAQLI 844
Query: 1082 IR 1083
R
Sbjct: 845 SR 846
>gi|168010740|ref|XP_001758062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690939|gb|EDQ77304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1109
Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1049 (53%), Positives = 735/1049 (70%), Gaps = 62/1049 (5%)
Query: 4 QKQQVISRFFAPKS--------NQTTASSSASSP------------RPPQQTPPPKI--- 40
++QQVISRFF PKS + T ++S+AS P RP + PP +
Sbjct: 2 KRQQVISRFFTPKSVAASPATPSPTASTSTASKPAGAKQSSSGSGTRPLVRIPPASLEPA 61
Query: 41 ------AATVSFSPA-----KRKVVSSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKY 89
A + + PA RK V L +++ + PS + T Y
Sbjct: 62 GPRGWAANSATVIPAVDPDRHRKFVDKLL---ARNNERITEEEIRYGKPPSGKLT----Y 114
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TPLE QV+ELK +YPDVLLMIEVGYKFRFFG DAE AA+VLGI+A+ +HNF++ASIPTFR
Sbjct: 115 TPLELQVLELKERYPDVLLMIEVGYKFRFFGNDAETAARVLGIFAYYNHNFLSASIPTFR 174
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG- 208
L+VHVRRLV AG+KVGVV+QTETAAIKAHG K+GPF RGLSALYT+ATLEAAED+GG
Sbjct: 175 LHVHVRRLVEAGYKVGVVRQTETAAIKAHGTNKSGPFTRGLSALYTRATLEAAEDLGGDT 234
Query: 209 EDGCGGESNYLVCVVDDD--GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGF 266
ED G +YL+C+ +D +G ++G + D RLGVVAV+ +TGDV++G+F D
Sbjct: 235 EDHVGRLHSYLMCIAEDPILQGLGSSKSGYY----DARLGVVAVDPATGDVMFGDFKDSV 290
Query: 267 LRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEV 326
+R+ LEA+LL+ +PAELLL PLS TEK+++ +AGPAS+VR+E SRDCF GGALAEV
Sbjct: 291 MRNELEALLLTCAPAELLLATPLSAATEKLVIEHAGPASDVRIERISRDCFRDGGALAEV 350
Query: 327 MSLYENMGEDTLSNN-EDQNMD----VPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++ Y++ GED +++ ED+ +D V +M MPD+ +Q+LAL +R+L+Q
Sbjct: 351 IAFYKSKGEDDAADSVEDEKVDPGLEVLFLFTSPIYFTAVMAMPDIVMQSLALALRYLRQ 410
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
FG+E+++ LGASFR +G EM+LS N L+QLE+LRNN++G+ GTLL +M+HT T++G+
Sbjct: 411 FGMEKVLKLGASFRRFAGHSEMSLSPNALRQLEILRNNADGTNKGTLLWLMDHTHTLFGA 470
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RL+R WVTHPL D LI+ARLDAV+EIAESMGS ++ G V Q +
Sbjct: 471 RLMRHWVTHPLQDEGLIAARLDAVTEIAESMGSVGVAQGHGSFPGSGRGGGNVGKQ--GL 528
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE---- 557
L S+L SLG+ PD++RGITRIF RTAT +EF++V+Q ++ A +QL+QLH D + +
Sbjct: 529 LVSLLMSLGKLPDVERGITRIFLRTATAAEFVSVVQGLIKASRQLRQLHFDHKDSDMELD 588
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
V K++ S+L++RL+ ASS +V AA+LLS+++ +AA GD L L +G+F EV
Sbjct: 589 DVHPKSVKSSLMRRLVAAASSVSVSEPAAQLLSSLDTDAAASGDKLKLFHCRDGKFPEVK 648
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTK 677
R A+++ +++L+ L+ RK L LE+MSVSG THLI++P +VP NW KVNSTK
Sbjct: 649 NCRLAIEAIEQQLEDLLPNIRKVLKSPRLEYMSVSGTTHLIQMPVAHRVPANWIKVNSTK 708
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
RYH PEVL ALD L LA EEL+I C AWD+FL EF +Y F+AAVQALAALDCLH
Sbjct: 709 AMHRYHPPEVLEALDALTLAKEELSIACGRAWDAFLAEFASHYVAFRAAVQALAALDCLH 768
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQII 797
+LA +SRN+ +VRP FV +P Q+ I +GRHPVLD L D FVPNDT L A++E CQII
Sbjct: 769 SLAIVSRNQGYVRPEFVGKCDPSQLLITAGRHPVLDATLQDGFVPNDTYLQADKERCQII 828
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNMGGKSCYIRQVALI IMAQVGS+VPA+SA+LHV D ++TRMGASDSIQ+G STF E
Sbjct: 829 TGPNMGGKSCYIRQVALITIMAQVGSYVPATSAKLHVCDAVFTRMGASDSIQKGSSTFFE 888
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
EL+E S ILR T++SLVI+DELGRGTSTHDGVAIAYATL +LL+ +C+ FVTHYP+I
Sbjct: 889 ELSETSSILRRATSRSLVIIDELGRGTSTHDGVAIAYATLHHLLKEIRCLTFFVTHYPRI 948
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
AD+K +F G+V Y+VSYL ++ Q +T+LYK+VPGV+ SFG VA+LAQ
Sbjct: 949 ADLKDEFPGNVSPYYVSYLAEELRYA---EEATQKITFLYKLVPGVASRSFGLHVARLAQ 1005
Query: 978 LPPSCISRATVIAAKLEAEVSSRVQNRSA 1006
LP C+ +A AAKLE EV+SR SA
Sbjct: 1006 LPEVCVLQAAAKAAKLEEEVNSRTAAASA 1034
>gi|90399078|emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]
Length = 2505
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/1151 (51%), Positives = 741/1151 (64%), Gaps = 147/1151 (12%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
MGK KQQV+SRFF+PK + +++ P PP+ P +AA VSFSPAKR S+ P
Sbjct: 246 MGKPKQQVLSRFFSPKPRPSAPATADDPPPPPRPPAEPPVAAVVSFSPAKRARALSVSPK 305
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTT----------HNKKYTPLEQQVVELKTKYPDVLLMI 110
T K+ K SP + + + K YTPLEQQVV+LK ++PDVLLM+
Sbjct: 306 TTAKRAKPSPPPSDYVRRRLLEPPRPPPPAALNPSGKGYTPLEQQVVDLKARHPDVLLMV 365
Query: 111 EVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQT 170
EVGY+FRFFGEDA +AA VLGI AH DH+F+TASIPTFRL HVRRLV AG KVGVV+QT
Sbjct: 366 EVGYRFRFFGEDAAVAASVLGIIAHPDHSFLTASIPTFRLGFHVRRLVAAGHKVGVVRQT 425
Query: 171 ETAAIKAHGPGKAG--PFGRGLSALYTKATLEAA--EDVGGGEDGCGGESNYLVCVVDDD 226
ETAAIKA G A PF RGLSA+YT+AT+EAA E GGG G S YLVCVVD
Sbjct: 426 ETAAIKAAHGGGAAGTPFARGLSAVYTRATIEAAAGELEGGGAPDEG--SRYLVCVVD-- 481
Query: 227 GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLG 286
K + + +GF+V++GVVA+E+STG+VV+GEF DG R+GLEAVLL L+P E++LG
Sbjct: 482 ----KEVDAMGTEGFEVKIGVVAIEVSTGEVVHGEFMDGVSRNGLEAVLLGLAPVEVILG 537
Query: 287 QPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLS-NNEDQN 345
P+S TEK+++AYAGP SNVRVE SR CF GGALAE++SL+E G D + N
Sbjct: 538 TPISSATEKLMVAYAGPTSNVRVERTSRLCFSEGGALAELLSLFEKSGVDAPTVENGRHL 597
Query: 346 MDVPEQGNHRSAIE----------------------GIMNMPDLAVQALALTIRHLKQFG 383
M++ E+ N+ IE GIM MP+L + ALAL++R+LK FG
Sbjct: 598 MEMNEENNNPRGIEVPLSSSELTVIAPYDWVSICSLGIMAMPELVIHALALSVRYLKGFG 657
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
++RI+C G+SF+ + + EM+LSANTLQQLE+
Sbjct: 658 MDRIICFGSSFQPFTANTEMSLSANTLQQLEL---------------------------- 689
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
THPLCDRN I R DAVSEI+ES+GS + S + Q + S + V ILS
Sbjct: 690 -----THPLCDRNQICTRHDAVSEISESIGSQQYSTNNLQDEVDMSCSSSVRSDLSTILS 744
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATP--------------------SEFIAVMQAILYAG 543
SVL L + DIQRGITRIFH AT EF+ V+QAIL AG
Sbjct: 745 SVLRMLAGTLDIQRGITRIFHCKATAKEGTSNDTPFGLIILVVLDKDEFVGVVQAILTAG 804
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
KQLQ+L ++ +T+HS LL+RLI TASS V+ AA L+S +NK+AADQGD+L
Sbjct: 805 KQLQKLVLEDTDTMSSQHRTVHSPLLRRLINTASSCTVLANAATLVSCLNKDAADQGDML 864
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
NL I S QF EVA V+ AK++L+ LI RKQLG LP +
Sbjct: 865 NLFIASVDQFPEVAEGHATVEMAKQKLELLITEYRKQLG-----------------LPVD 907
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
KVP +W KVNSTKKTIRYH+PEV L+ L LA E+L ++CR W++FL +FG YYA+F
Sbjct: 908 RKVPSSWMKVNSTKKTIRYHTPEVSKNLENLLLAKEKLAVICRTTWNNFLMDFGRYYAQF 967
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
QA V++LA LDCL++LATL++ +VRP FV ++E QIHI GRHPVL+++L NFVPN
Sbjct: 968 QATVKSLATLDCLYSLATLAKQNKYVRPNFVRENEASQIHIKDGRHPVLESLLGVNFVPN 1027
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT LHA EYCQI+TGPNMGGKSCYIRQVALI +MAQVGSFVPASSA LH +DGIYTRMG
Sbjct: 1028 DTELHANSEYCQIVTGPNMGGKSCYIRQVALITLMAQVGSFVPASSATLHAVDGIYTRMG 1087
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASDSIQ G STF EEL+EAS IL NC+++SLVI+DELGRGTSTHDGVAIAYATL YLL+
Sbjct: 1088 ASDSIQHGTSTFYEELSEASNILHNCSSRSLVIIDELGRGTSTHDGVAIAYATLHYLLKE 1147
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK---------VMGPMDSKSDQDVT 954
KKCMV+FVTHYPKI +I +F GSVG YHVSYL + K V+ ++K ++T
Sbjct: 1148 KKCMVIFVTHYPKILNILREFEGSVGAYHVSYLATRKLLEVADRQMVINNTETKDLGEIT 1207
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKL 1014
+LYK+V G S+ SFG VA LAQLP SCI RA+V+AAKL+ E+S R +N+ +L
Sbjct: 1208 FLYKLVAGASDRSFGLNVALLAQLPSSCIERASVMAAKLQQELSEREKNK------FCRL 1261
Query: 1015 SDQEQEAQENMPVSPESF----YLGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFL 1070
D +E+ SP+ Y G EA +R LF N+ A +D + L
Sbjct: 1262 MDVPRES------SPKELCAQPYQGLAEA------CHRILF-NVTSAQSNDELTDTLSSL 1308
Query: 1071 KHARSIAKELI 1081
+ AR IA + I
Sbjct: 1309 REAREIALKAI 1319
>gi|222629796|gb|EEE61928.1| hypothetical protein OsJ_16670 [Oryza sativa Japonica Group]
Length = 2115
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/1008 (53%), Positives = 674/1008 (66%), Gaps = 109/1008 (10%)
Query: 109 MIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVK 168
M+EVGY+FRFFGEDA +AA VLGI AH DH+F+TASIPTFRL HVRRLV AG KVGVV+
Sbjct: 1 MVEVGYRFRFFGEDAAVAASVLGIIAHPDHSFLTASIPTFRLGFHVRRLVAAGHKVGVVR 60
Query: 169 QTETAAIKAHGPGKAG--PFGRGLSALYTKATLEAA--EDVGGGEDGCGGESNYLVCVVD 224
QTETAAIKA G A PF RGLSA+YT+AT+EAA E GGG G S YLVCVVD
Sbjct: 61 QTETAAIKAAHGGGAAGTPFARGLSAVYTRATIEAAAGELEGGGAPDEG--SRYLVCVVD 118
Query: 225 DDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELL 284
K + + +GF+V++GVVA+E+STG+VV+GEF DG R+GLEAVLL L+P E++
Sbjct: 119 ------KEVDAMGTEGFEVKIGVVAIEVSTGEVVHGEFMDGVSRNGLEAVLLGLAPVEVI 172
Query: 285 LGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLS-NNED 343
LG P+S TEK+++AYAGP SNVRVE SR CF GGALAE++SL+E G D + N
Sbjct: 173 LGTPISSATEKLMVAYAGPTSNVRVERTSRLCFSEGGALAELLSLFEKSGVDAPTVENGR 232
Query: 344 QNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEM 403
M++ E+ N+ IEGIM MP+L + ALAL++R+LK FG++RI+C G+SF+ + + EM
Sbjct: 233 HLMEMNEENNNPRGIEGIMAMPELVIHALALSVRYLKGFGMDRIICFGSSFQPFTANTEM 292
Query: 404 TLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLD 463
+LSANTLQQLE+ THPLCDRN I R D
Sbjct: 293 SLSANTLQQLEL---------------------------------THPLCDRNQICTRHD 319
Query: 464 AVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIF 523
AVSEI+ES+GS + S + Q + S + V ILSSVL L + DIQRGITRIF
Sbjct: 320 AVSEISESIGSQQYSTNNLQDEVDMSCSSSVRSDLSTILSSVLRMLAGTLDIQRGITRIF 379
Query: 524 HRTATP--------------------SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
H AT EF+ V+QAIL AGKQLQ+L ++ +T
Sbjct: 380 HCKATAKEGTSNDTPFGLIILVVLDKDEFVGVVQAILTAGKQLQKLVLEDTDTMSSQHRT 439
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
+HS LL+RLI TASS V+ AA L+S +NK+AADQGD+LNL I S QF EVA V
Sbjct: 440 VHSPLLRRLINTASSCTVLANAATLVSCLNKDAADQGDMLNLFIASVDQFPEVAEGHATV 499
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYH 683
+ AK++L+ LI RKQLG LP + KVP +W KVNSTKKTIRYH
Sbjct: 500 EMAKQKLELLITEYRKQLG-----------------LPVDRKVPSSWMKVNSTKKTIRYH 542
Query: 684 SPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLS 743
+PEV L+ L LA E+L ++CR W++FL +FG YYA+FQA V++LA LDCL++LATL+
Sbjct: 543 TPEVSKNLENLLLAKEKLAVICRTTWNNFLMDFGRYYAQFQATVKSLATLDCLYSLATLA 602
Query: 744 RNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMG 803
+ +VRP FV ++E QIHI GRHPVL+++L NFVPNDT LHA EYCQI+TGPNMG
Sbjct: 603 KQNKYVRPNFVRENEASQIHIKDGRHPVLESLLGVNFVPNDTELHANSEYCQIVTGPNMG 662
Query: 804 GKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEAS 863
GKSCYIRQVALI +MAQVGSFVPASSA LH +DGIYTRMGASDSIQ G STF EEL+EAS
Sbjct: 663 GKSCYIRQVALITLMAQVGSFVPASSATLHAVDGIYTRMGASDSIQHGTSTFYEELSEAS 722
Query: 864 YILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTK 923
IL NC+++SLVI+DELGRGTSTHDGVAIAYATL YLL+ KKCMV+FVTHYPKI +I +
Sbjct: 723 NILHNCSSRSLVIIDELGRGTSTHDGVAIAYATLHYLLKEKKCMVIFVTHYPKILNILRE 782
Query: 924 FTGSVGTYHVSYLTSHK---------VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
F GSVG YHVSYL + K V+ ++K ++T+LYK+V G S+ SFG VA
Sbjct: 783 FEGSVGAYHVSYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVAL 842
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQ-ENMPVSPESFY 1033
LAQLP SCI RA+V+AAKL+ E+S R +N+ +L D +E+ + + P Y
Sbjct: 843 LAQLPSSCIERASVMAAKLQQELSEREKNK------FCRLMDVPRESSPKELCAQP---Y 893
Query: 1034 LGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELI 1081
G EA +R LF N+ A +D + L+ AR IA + I
Sbjct: 894 QGLAEA------CHRILF-NVTSAQSNDELTDTLSSLREAREIALKAI 934
>gi|302772959|ref|XP_002969897.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
gi|300162408|gb|EFJ29021.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
Length = 876
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/924 (53%), Positives = 633/924 (68%), Gaps = 61/924 (6%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TPLEQQ+VELK K+PDVLLM+EVGYKFRFFGEDAE AA VLGI A+ HNF+TAS+PTFR
Sbjct: 1 TPLEQQIVELKKKFPDVLLMVEVGYKFRFFGEDAEKAANVLGIVAYYSHNFLTASVPTFR 60
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGE 209
L+VHVRRLV AG+KVGVVKQTETAAIKAHG KAGPF R LSALYTKATLEA E +GG E
Sbjct: 61 LHVHVRRLVEAGYKVGVVKQTETAAIKAHGTNKAGPFSRDLSALYTKATLEAGEFLGGEE 120
Query: 210 ----DGCGGESNYLVCVVDD-----DGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
DG S+Y++CVV++ N GK + V G FD R GVVAVE STGDV+YG
Sbjct: 121 SGERDGPIRLSSYIMCVVEEAITEHKANAGK--DEVRGS-FDARFGVVAVETSTGDVMYG 177
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
F D R+ LE+ LL+ +PAELLL LS T+K+L+ YA A++VRVE + F G
Sbjct: 178 HFMDTVTRTELESRLLACAPAELLLSASLSASTKKLLMDYA-VAADVRVEKTPENSFENG 236
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
G +A + Y ++ + D+ +D + +E +M MP++ V A A +LK
Sbjct: 237 GTVAALADFYGSLA-SSKKGCLDEKVD--------AGLEALMTMPEIVVAAFAHIFAYLK 287
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
QF LE ++ LGA FR +G EMTLS NT++QLE+L N ++G+E G+L +MNHT T +G
Sbjct: 288 QFNLENVLRLGALFRPFAGQQEMTLSPNTIRQLEILHNQTDGTENGSLFWLMNHTKTAFG 347
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+RLL+ WVTHPL DR LIS RLDAV+EIAES+G +K T+
Sbjct: 348 ARLLKYWVTHPLRDRMLISQRLDAVAEIAESIG------------DKGRGTTVAT----- 390
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L+S L LG+ PD++RGITRI+H+TAT EFI V+ AI+ A Q Q++
Sbjct: 391 -LASTLLLLGKLPDLERGITRIYHKTATTYEFINVINAIMKAASQFQRV----------- 438
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
+ SALL RLI +S +VI A KL++++N EAA GD +NL + GQF EV +
Sbjct: 439 -RDARSALLSRLISAVTSTSVIDHANKLVTSLNAEAAAAGDKINLFVA--GQFPEVDECK 495
Query: 621 KAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTI 680
+ ++S +E+L+S + RK L NLE++SVSG + L+E+P +VP +W K+NSTKK
Sbjct: 496 ENIKSIEEDLESFLPSYRKLLKCSNLEYLSVSGTSFLVEVPCVQRVPADWVKINSTKKAN 555
Query: 681 RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA 740
RYH PEVL A +++ALA E+L I C AWD FL +F Y+ EF+AAVQALAALDCL++LA
Sbjct: 556 RYHPPEVLEASERMALAKEQLNISCAKAWDMFLTDFTSYHMEFRAAVQALAALDCLYSLA 615
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGP 800
+S N+ +VRP FVD E + I GRHPVLD+ L D FVPNDT L E E QIITGP
Sbjct: 616 VVSCNQGYVRPEFVD--EACLLKIEGGRHPVLDSTLQDAFVPNDTVLSGEGERSQIITGP 673
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKSCYIRQVALI IM+Q+GS+VPA++A+LHV D ++TRMGA D IQ+G STF EEL+
Sbjct: 674 NMGGKSCYIRQVALITIMSQIGSYVPAATAKLHVFDAVFTRMGAMDRIQRGSSTFFEELS 733
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
EAS IL T++SLV++DELGRGTSTHDGVAIAYATL +LL+ +C LFVTHY + ++
Sbjct: 734 EASTILHKATSRSLVVIDELGRGTSTHDGVAIAYATLHHLLQEVQCFTLFVTHYLNVTEV 793
Query: 921 KTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD----VTYLYKVVPGVSESSFGFKVAQLA 976
F G V YH+SYL + G +D S Q+ VT+LYK+ PG + SFG VA+LA
Sbjct: 794 VKLFPGRVQAYHMSYL-AESPEGDLDKSSVQEAAQKVTFLYKLQPGAASRSFGINVARLA 852
Query: 977 QLPPSCISRATVIAAKLEAEVSSR 1000
++P SC++RA AA E E+SSR
Sbjct: 853 KVPESCVARAAEKAAAFEDEMSSR 876
>gi|315259983|gb|ADT92190.1| DNA mismatch repair protein [Zea mays]
Length = 981
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/1119 (46%), Positives = 679/1119 (60%), Gaps = 176/1119 (15%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSA------------SSPRPPQQTPPPKIAATVSFSP 48
MGK KQQV+SRFF+PK +S++ S+ PP ++ SFSP
Sbjct: 1 MGKPKQQVLSRFFSPKPAPVLSSAAPDPPPPLPPNPKPSAAHPP-------VSTVASFSP 53
Query: 49 AKRKVVSSLFPPKTP--KKPKLSP---------HTLNPI----PTPSSQTTHNKKYTPLE 93
AKR SL PK+P K+P +P L P+ P T K YTPLE
Sbjct: 54 AKRARALSL-SPKSPAAKRPNPTPPPSRDAVRRRLLEPLHQEPPRLLDPTGGGKGYTPLE 112
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVH 153
QQVV+LK ++PDVLLM+EVGY+FRFFGEDA +AA VLGI AH D +F+TAS+P FRL H
Sbjct: 113 QQVVDLKARHPDVLLMVEVGYRFRFFGEDAAVAAAVLGIVAHPDRSFLTASVPNFRLGFH 172
Query: 154 VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA--EDVGGGEDG 211
VRRLV A A G G A PF RGLSA+YT+AT+EAA E GGG
Sbjct: 173 VRRLV---------AAGHKARAAARGVGGA-PFSRGLSAVYTRATIEAAAGELEGGGAAA 222
Query: 212 CGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGL 271
S+YLVC+VD + +G V++G+VA+E+STG+VV+GEF D RSGL
Sbjct: 223 PEEGSSYLVCIVDKEVEAAG------REGLQVKVGLVAIEVSTGEVVHGEFLDSDSRSGL 276
Query: 272 EAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYE 331
EA+LL L+P E++LG PLS TEK+++AY GP SNVRVE S + F ALAE+++L+E
Sbjct: 277 EALLLGLAPVEVILGTPLSFATEKIMMAYVGPTSNVRVERVSCEWFGKDAALAELITLFE 336
Query: 332 NMGEDTLSNNEDQNM-DVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCL 390
+ +D+ + + + N+ IEGIM MP+L VQALAL++R+LK FG+ERI+C
Sbjct: 337 KSVNNASRAEDDRKLIETNDDNNNFHGIEGIMAMPELVVQALALSVRYLKGFGMERIICF 396
Query: 391 GASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTH 450
G+SFR S E +LSAN LQQLEV+ ++ + L+ I TI S++ R
Sbjct: 397 GSSFRPFSADAEFSLSANALQQLEVVFCSTFKVKVPVLIFI-----TIL-SQVFR----- 445
Query: 451 PLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLG 510
NSD T E + I+++ TS G
Sbjct: 446 ------------------------------------NNSDGT-TEGSLFQIMNNTCTSFG 468
Query: 511 RSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLK 570
+R+ + F+ V+Q+IL +GKQLQ+L ++ K++HS LL+
Sbjct: 469 ---------SRLLR-----NWFVGVIQSILTSGKQLQKLVLEDIGIVSSPHKSVHSPLLR 514
Query: 571 RLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEEL 630
RLI TASS ++ A KLLS +NK+AADQGD+LNL + S QF E
Sbjct: 515 RLINTASSSTILNSAVKLLSCLNKDAADQGDMLNLFMASVDQFPE--------------- 559
Query: 631 DSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTA 690
LP + +VP NW K+NSTKK IRYH+PE+L
Sbjct: 560 -----------------------------LPVDRRVPSNWIKINSTKKAIRYHTPEILKN 590
Query: 691 LDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVR 750
LD+L LA EEL ++CR+ W FL +FG YYA+FQA V++LAALDCL++LA L++ N++R
Sbjct: 591 LDKLLLAKEELAVICRSMWHKFLTDFGKYYAQFQAVVESLAALDCLYSLAVLAKQNNYIR 650
Query: 751 PVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIR 810
P+FV D+EP QIHI GRHPVL+++L DNFVPNDT LHA+ EYCQI+TGPNMGGKSCYIR
Sbjct: 651 PIFVHDNEPSQIHIKDGRHPVLESLLGDNFVPNDTELHADGEYCQIVTGPNMGGKSCYIR 710
Query: 811 QVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCT 870
QVALI +MAQVGSFVPASSA LHV+DGIYTRMGASDSIQQG STF EE+NEAS IL NC+
Sbjct: 711 QVALITMMAQVGSFVPASSAMLHVVDGIYTRMGASDSIQQGISTFHEEMNEASNILHNCS 770
Query: 871 AQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGT 930
++SLVI+DELGRGTSTHDGVAIAY+TL YLL+ KKC+V+FVTHYPKI DI+ +F GSVG
Sbjct: 771 SRSLVIIDELGRGTSTHDGVAIAYSTLHYLLKEKKCIVIFVTHYPKILDIQREFEGSVGA 830
Query: 931 YHVSYLTSHKVMGPMDSKSDQ--------DVTYLYKVVPGVSESSFGFKVAQLAQLPPSC 982
YHVSYL + K++ D + + ++ +LYK+V G S+ SFG VA LAQLP C
Sbjct: 831 YHVSYLATRKLLEVTDKQVETSPEANDLGEIIFLYKLVAGASDRSFGLNVALLAQLPSRC 890
Query: 983 ISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRVEASED 1042
I RA+V+AAKL+ E+S R + + +R + D E+ + + Y +
Sbjct: 891 IKRASVMAAKLQEELSPREEIK-LRRTTDAQTVDGPSESSAEVGLFCAHPY-------QR 942
Query: 1043 LISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELI 1081
L R + LN+ A +++ + LK+A+ IA++ I
Sbjct: 943 LAETCRRILLNITLAQSNNDVTNTLPSLKNAQEIAQKTI 981
>gi|302823252|ref|XP_002993280.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
gi|300138950|gb|EFJ05701.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
Length = 942
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/959 (51%), Positives = 637/959 (66%), Gaps = 80/959 (8%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASI 145
+K TPLEQQ+VELK K+PD I+VGYKFRFFGEDAE AA VLGI A+ HNF+TAS+
Sbjct: 3 KEKLTPLEQQIVELKKKFPD----IQVGYKFRFFGEDAEKAANVLGIVAYYSHNFLTASV 58
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDV 205
PTFRL+VHVRRLV AG+KVGVVKQTETAAIKAHG KAGPF R LSALYTKATLEA E +
Sbjct: 59 PTFRLHVHVRRLVEAGYKVGVVKQTETAAIKAHGTNKAGPFSRDLSALYTKATLEAGEFL 118
Query: 206 GGGE----DGCGGESNYLVCVVDD-----DGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
GG E DG S+Y++CVV++ N GK + V G FD R GVVAVE STGD
Sbjct: 119 GGEESGERDGPIRLSSYIMCVVEEAITEHKANAGK--DEVRG-SFDARFGVVAVETSTGD 175
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDC 316
V+YG F D R+ LE+ LL+ +PAELLL LS T+K+L+ YAG A++VRVE +
Sbjct: 176 VMYGHFMDTVTRTELESRLLACAPAELLLSASLSASTKKLLMDYAG-AADVRVEKTPENS 234
Query: 317 FIGGGALAEVMSLYENMG---EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA 373
F GG +A + Y ++ + L D ++V ++ +M MP++ V A A
Sbjct: 235 FDNGGTVAALADFYGSLASSKKGCLDEKVDGGLEVI------FYLQALMTMPEIVVAAFA 288
Query: 374 LTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
+LKQF LE ++ LGA FR +G EMTLS NT++QLE+L N ++G+E G L +MN
Sbjct: 289 HIFAYLKQFNLENVLRLGALFRPFAGQQEMTLSPNTIRQLEILHNQTDGTENGCLFWLMN 348
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G+RLL+ WVTHPL DR LIS RLDAV+EIAES+G +K T+
Sbjct: 349 HTKTAFGARLLKYWVTHPLRDRMLISQRLDAVAEIAESIG------------DKGRGTTV 396
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT---------------PSEFIAVMQA 538
L+S L LG+ PD++RGITRI+H+TAT FI V+ A
Sbjct: 397 AT------LASTLLLLGKLPDLERGITRIYHKTATYEAPFLFCNPVVILSDRNFINVINA 450
Query: 539 ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAAD 598
I+ A Q Q++ + SALL RLI +S +VI A KL++++N EAA
Sbjct: 451 IMKAASQFQRV------------RDARSALLSRLISAVTSTSVIDHANKLVTSLNAEAAA 498
Query: 599 QGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLI 658
GD +NL + GQF EV ++ ++S +E+L+S + RK L NLE++SVSG + L+
Sbjct: 499 AGDKINLFVA--GQFPEVDECKENIKSIEEDLESFLPSYRKLLKCSNLEYLSVSGTSFLV 556
Query: 659 ELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG 718
E+P +VP +W K+NSTKK RYH PEVL A +++ALA E+L I C AWD FL +F
Sbjct: 557 EVPCAQRVPADWVKINSTKKANRYHPPEVLEASERMALAKEQLNISCAKAWDMFLTDFTS 616
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
Y+ EF+AAVQALAALDCL++LA +S N+ +VRP FVD E + I GRHPVLD+ L D
Sbjct: 617 YHMEFRAAVQALAALDCLYSLAVVSCNQGYVRPEFVD--EACLLKIEGGRHPVLDSTLQD 674
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
FVPNDT L E E QIITGPNMGGKSCYIRQVALI IM+Q+GS+VPA++A+LHV D +
Sbjct: 675 AFVPNDTVLSGEGERSQIITGPNMGGKSCYIRQVALITIMSQIGSYVPAATAKLHVFDAV 734
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TRMGA D IQ+G STF EEL+EAS IL T++SLV++DELGRGTSTHDGVAIAYATL
Sbjct: 735 FTRMGAMDRIQRGSSTFFEELSEASTILHKATSRSLVVIDELGRGTSTHDGVAIAYATLH 794
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD----VT 954
+LL+ +C LFVTHY + ++ F G V YH+SYL + G +D S Q+ VT
Sbjct: 795 HLLQEVQCFTLFVTHYLNVTEVVKLFPGRVQAYHMSYL-AESPEGDLDKSSVQEAAQKVT 853
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVK 1013
+LYK+ PG + SFG VA+LA++P SC++RA AA E E+SSR + S ++ L++
Sbjct: 854 FLYKLQPGAASRSFGINVARLAKVPESCVARAAEKAAAFEDEMSSRHSSNSREKQKLLE 912
>gi|115461400|ref|NP_001054300.1| Os04g0682900 [Oryza sativa Japonica Group]
gi|113565871|dbj|BAF16214.1| Os04g0682900 [Oryza sativa Japonica Group]
Length = 813
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/821 (53%), Positives = 567/821 (69%), Gaps = 37/821 (4%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
MGK KQQV+SRFF+PK + +++ P PP+ P +AA VSFSPAKR S+ P
Sbjct: 1 MGKPKQQVLSRFFSPKPRPSAPATADDPPPPPRPPAEPPVAAVVSFSPAKRARALSVSPK 60
Query: 61 KTPKKPKLSPHTLNPIPTP----------SSQTTHNKKYTPLEQQVVELKTKYPDVLLMI 110
T K+ K SP + + ++ K YTPLEQQVV+LK ++PDVLLM+
Sbjct: 61 TTAKRAKPSPPPSDYVRRRLLEPPRPPPPAAVNPSGKAYTPLEQQVVDLKARHPDVLLMV 120
Query: 111 EVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQT 170
EVGY+FRFFGEDA +AA VLGI AH DH+F+TASIPTFRL HVRRLV AG KVGVV+QT
Sbjct: 121 EVGYRFRFFGEDAAVAASVLGIIAHPDHSFLTASIPTFRLGFHVRRLVAAGHKVGVVRQT 180
Query: 171 ETAAIKAHGPGKAG--PFGRGLSALYTKATLEAA--EDVGGGEDGCGGESNYLVCVVDDD 226
ETAAIKA G A PF RGLSA+YT+AT+EAA E GGG G S YLVCVVD
Sbjct: 181 ETAAIKAAHGGGAAGTPFARGLSAVYTRATIEAAAGELEGGGAPDEG--SRYLVCVVD-- 236
Query: 227 GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLG 286
K + + +GF+V++GVVA+E+STG+VV+GEF DG R+GLEAVLL L+P E++LG
Sbjct: 237 ----KEVDAMGTEGFEVKIGVVAIEVSTGEVVHGEFMDGVSRNGLEAVLLGLAPVEVILG 292
Query: 287 QPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLS-NNEDQN 345
P+S TEK+++AYAGP SNVRVE SR CF GGALAE++SL+E G D + N
Sbjct: 293 TPISSATEKLMVAYAGPTSNVRVERTSRLCFSEGGALAELLSLFEKSGVDAPTVENGRHL 352
Query: 346 MDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTL 405
M++ E+ N+ IEGIM MP+L + ALAL++R+LK FG++RI+C G+SF+ + + EM+L
Sbjct: 353 MEMNEENNNPRGIEGIMAMPELVIHALALSVRYLKGFGMDRIICFGSSFQPFTANTEMSL 412
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
SANTLQQLEVL+N+S+GS G+L MN+T T +GSRL R W+THPLCDRN I R DAV
Sbjct: 413 SANTLQQLEVLKNHSDGSLDGSLFQTMNNTCTAFGSRLFRHWLTHPLCDRNQICTRHDAV 472
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
SEI+ES+GS + S + Q + S + V ILSSVL L + DIQRGITRIFH
Sbjct: 473 SEISESIGSQQYSTNNLQDEVDMSCSSSVRSDLSTILSSVLRMLAGTLDIQRGITRIFHC 532
Query: 526 TATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
AT EF+ V+QAIL AGKQLQ+L ++ +T+HS LL+RLI TASS V+ A
Sbjct: 533 KATAKEFVGVVQAILTAGKQLQKLVLEDTDTMSSQHRTVHSPLLRRLINTASSCTVLANA 592
Query: 586 AKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
A L+S +NK+AADQGD+LNL I S QF EVA V+ AK++L+ LI RKQLG+RN
Sbjct: 593 ATLVSCLNKDAADQGDMLNLFIASVDQFPEVAEGHATVEMAKQKLELLITEYRKQLGVRN 652
Query: 646 LEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
LEF +V+G THLIELP + KVP +W KVNSTKKTIRYH+PEV L+ L LA E+L ++C
Sbjct: 653 LEFKTVAGTTHLIELPVDRKVPSSWMKVNSTKKTIRYHTPEVSKNLENLLLAKEKLAVIC 712
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHIC 765
R W++FL +FG YYA+FQA V++LA LDCL++LATL++ +VRP FV ++E QIHI
Sbjct: 713 RTTWNNFLMDFGRYYAQFQATVKSLATLDCLYSLATLAKQNKYVRPNFVRENEASQIHIK 772
Query: 766 SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKS 806
GRHPV++ ++ YC T N G+S
Sbjct: 773 DGRHPVVNMKII--------------FYCATDTISNTTGRS 799
>gi|384253208|gb|EIE26683.1| hypothetical protein COCSUDRAFT_64608 [Coccomyxa subellipsoidea
C-169]
Length = 1168
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/1009 (42%), Positives = 596/1009 (59%), Gaps = 129/1009 (12%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
+K TPLE+QV ELK K+P VLL+IEVGYKFRFFGEDAE+AA+ I+ + D NFMTASIP
Sbjct: 180 QKRTPLEEQVYELKRKHPGVLLVIEVGYKFRFFGEDAEIAARECNIFCYPDRNFMTASIP 239
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED-- 204
RL+V+VRRLV AGFKVG+V+QTETAA+K G + PF R L+ALYT+ATLEA +
Sbjct: 240 VPRLHVYVRRLVEAGFKVGIVRQTETAALKKAGDNRNAPFTRQLTALYTRATLEAGDKDH 299
Query: 205 VGGG-------EDGCG-----GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
VG G E G G S+YLVCVV+ G N G V +G+VA+E
Sbjct: 300 VGEGRGSTFSSEAGTASWTNEGLSSYLVCVVE-----GTAENAPQG---AVDIGIVAIET 351
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STGDV++ +F DG +R+ LEA L+ +P+ELL+ P+S ++++L A+ + +R + A
Sbjct: 352 STGDVLHAQFRDGMMRTELEARLVFAAPSELLIATPISSASQRLLGAFTSQSRGLRSQTA 411
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
R + GGA+A V + Y + G VPE A+E ++ +P L V+AL
Sbjct: 412 PRARYSSGGAVAAVTAFYAHAG-------------VPE-----GALEAVLALPHLVVEAL 453
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
A I +LK +G+E ++ + ASFR + EM+LS NTL QLE+L NN +G E G+LL ++
Sbjct: 454 AFAIDYLKPYGMEAVLRVAASFRPFNTQHEMSLSPNTLSQLEILHNNDDGRERGSLLWLL 513
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+HT T +GSRLLR WV HPL D + I+ RLDAV E+A ++G +
Sbjct: 514 DHTRTPFGSRLLRSWVAHPLRDADRIAERLDAVEELARAIGGMEGAAGC----------- 562
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
+VE LT LG D++RGITR H TA P+EF +++A+ +L + D
Sbjct: 563 VVE---------ALTGLG---DLERGITRSLHGTAAPAEFSRMLRALSTVAPKL-GVQAD 609
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+ + L S LL+RL A+S V A ++LS +++EAA + ++L IS +
Sbjct: 610 ADLSSDAALEGLSSCLLQRLFRAAASREVAEAAYEMLSVMDEEAAAANNKIDL-FISEER 668
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI-THLIELPANFK-VPLNW 670
F EV AR+ V A E L L+ + RK LG+ L+++SV LIE+PA+ + +P +W
Sbjct: 669 FPEVFEARQEVADADEGLAKLLPVLRKTLGLPRLDYVSVQNQGDFLIEVPADRQDIPRDW 728
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
K++ TKK R+ PEV AL L L+ E L + AW +F+++FG Y+ F++AVQAL
Sbjct: 729 EKISGTKKVNRFRPPEVRNALAALELSRERLQLAADQAWKAFMRDFGSLYSPFRSAVQAL 788
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNL-H 788
AALD L +LA+L+ + +VRP V + E Q+ I GRHPVL ++ + VPNDT L
Sbjct: 789 AALDALQSLASLAIDPEYVRPEIVGEEEQPQLVIRGGRHPVLAAMMAEAQVVPNDTLLGG 848
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
A IITGPNMGGKSCYIRQ ALI IMAQVGSFVPA SA +HV D ++TRMGASD++
Sbjct: 849 ATGPRACIITGPNMGGKSCYIRQAALIAIMAQVGSFVPAESARMHVFDSVHTRMGASDNL 908
Query: 849 QQGRSTFLE-------------ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
GRSTFLE EL+E S IL + T +SLVI+DELGRGT+THDG+AIA+A
Sbjct: 909 AMGRSTFLEASPLAYTPCTSDSELSETSEILAHATPRSLVIIDELGRGTATHDGLAIAHA 968
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG-PMDSKSDQD-- 952
TL +L+ +C+ LFV A ++ + V T+++SY+ G P+ S Q
Sbjct: 969 TLQHLVTTTRCLTLFV------ASLQQDYPALVSTFYMSYIQQDPDDGQPLPGSSPQPKA 1022
Query: 953 ----------------------------------VTYLYKVVPGVSESSFGFKVAQLAQL 978
+ +LYK+ GV++ SFG VA++A L
Sbjct: 1023 GARGRQALQALPSTGASVDVAADDADQPAVSVPRIVFLYKLAAGVADKSFGLNVARMAHL 1082
Query: 979 PPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPV 1027
PPS I +A V AA++E++ R+ A D + + EA ++P+
Sbjct: 1083 PPSVIKQAGVRAAQMESDTLRRLSRPRAADD----TEENDIEAGRDVPL 1127
>gi|145345455|ref|XP_001417225.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577452|gb|ABO95518.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 916
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/927 (43%), Positives = 549/927 (59%), Gaps = 89/927 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TPLEQ V K KYP +LMIEVGYK+ F+G+DA A+KVLGI+A+ N++TAS+P R
Sbjct: 2 TPLEQSVKTFKAKYPGTMLMIEVGYKYHFYGDDARDASKVLGIFAYQSRNYLTASVPVVR 61
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGP--GKAGPFGRGLSALYTKATLEAAEDVG- 206
LNV+VRRLV AG++VGVVKQTETAA+KA G K+G F R L LYTKATL+A +
Sbjct: 62 LNVYVRRLVKAGYRVGVVKQTETAALKASGETGNKSGLFERKLVGLYTKATLDAGAALSD 121
Query: 207 GGEDG------CGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
G+DG G SN+L+CV +D ++ G R+G+ A+E STGDV+ G
Sbjct: 122 AGDDGEKSSMASGVLSNHLLCVAED-----RVAGGA-STSASTRVGLAAIETSTGDVLSG 175
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-RVECASRDCFIG 319
EF D R GLE+ LL +SPAE++L +P+S+ T +++ A G +N RVE +RD G
Sbjct: 176 EFMDTMQRPGLESRLLCISPAEIVLVEPISEPTARLIKAMYGSGANAARVERVTRDELTG 235
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
++L E+ L AL ++L
Sbjct: 236 -------VTLTGTKAEEATP---------------------------LVHTALCAGAKYL 261
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
++FG I+ L A+FR L G+ EM LS N L+QLEVL +S G+ G+LL +MNHT+T
Sbjct: 262 REFGQADILHLDAAFRPLEGADEMKLSPNVLRQLEVL-TSSAGTYKGSLLWLMNHTVTPM 320
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G RLLR WV+HPL ++ I RLDAV + E + S+ S+ HD+ + +
Sbjct: 321 GGRLLRHWVSHPLRSKSAIEGRLDAVDALRE-LTSFEEG-SMMDHDKVSHNT-------- 370
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
+ + L + PD++R + R+FH TATP EF+ + ++ + + R V
Sbjct: 371 --FNGLKIQLKQLPDLERSLARVFHGTATPGEFVGALTSLAKFSESCAAM------RASV 422
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA--DQGDLLNLMIISNG--QFSE 615
+ + + S LL+ I + P + A + L+ +N E A D+ + + + F +
Sbjct: 423 SGE-IKSTLLEAQIEAVTDPLLHALADQFLNALNLEIACVDKPSKTKIGLFKDDAESFPD 481
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT---HLIELPANFKVPLNWAK 672
+ A AV+ AK +D L+ R++LGM L + +V G+ LIE+P + P W K
Sbjct: 482 LHAATAAVEEAKRAMDDLLPELRRKLGMPRLGYTTVGGVGGGEWLIEVPMDRSCPTTWIK 541
Query: 673 V--NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
V N +KK +RYH PEV A L ANE AAW FL F YA F++A A+
Sbjct: 542 VSSNKSKKVVRYHPPEVTEAAAALECANERHMFAADAAWKEFLSSFRDNYAAFRSATSAV 601
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAE 790
A LD LHALA LSRN+ +VRP +DD P +H+ GRHPVLD LLD+FVPN +LH +
Sbjct: 602 ATLDALHALAILSRNEGYVRPELLDDSAPPSLHVVDGRHPVLDAHLLDDFVPNSIDLHGD 661
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
R +ITGPNMGGKSCYIRQVAL+ +MAQVGSFVPA A L VLD IYTRMGASD++
Sbjct: 662 RTRALVITGPNMGGKSCYIRQVALLSVMAQVGSFVPAKQARLTVLDAIYTRMGASDNLAM 721
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G STFLEE++EAS IL CT +SLVI+DELGRGTSTHDGVAIA ATL++L+ KC LF
Sbjct: 722 GSSTFLEEMSEASNILEMCTPRSLVIMDELGRGTSTHDGVAIAAATLEHLVRDAKCFTLF 781
Query: 911 VTHYPKIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ--DVTYLYKVVPGVSESS 967
VTHYP +A D++ K+ + SY+ ++ S++ + +LYK+ PGV+ S
Sbjct: 782 VTHYPSVARDVQAKYPTHCASCFTSYVE-------LEGSSEEMPRIQFLYKLTPGVAHRS 834
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLE 994
FG VA++A LPP+ I A V A++LE
Sbjct: 835 FGLNVARMACLPPAVIQSAGVKASELE 861
>gi|308802850|ref|XP_003078738.1| DNA mismatch repair protein MSH3 (ISS) [Ostreococcus tauri]
gi|116057191|emb|CAL51618.1| DNA mismatch repair protein MSH3 (ISS) [Ostreococcus tauri]
Length = 1062
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/933 (43%), Positives = 541/933 (57%), Gaps = 101/933 (10%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
+K TPLE V K KYP LLMIEVGYKF F+G+DA A+K LGI+A+ N++TAS+P
Sbjct: 155 QKMTPLELSVKAFKAKYPGTLLMIEVGYKFHFYGDDARDASKTLGIFAYQSRNYLTASVP 214
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG----KAGPFGRGLSALYTKATLEAA 202
RLNV+VRRLV AGF+VGVV+QTETAA+KA G K+G F R L LYTKATL+A
Sbjct: 215 VVRLNVYVRRLVKAGFRVGVVRQTETAALKASGESGSGNKSGLFERQLVGLYTKATLDAG 274
Query: 203 ---EDVGG-GEDGCGGE---SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTG 255
D G GE G + SN+L+CV ++ VG G VR+G+ A+E STG
Sbjct: 275 AALSDAGDDGERPSGTQERLSNHLLCVAEE--RVG---------GSKVRIGLAAIETSTG 323
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLA-YAGPASNVRVECASR 314
DV+ GEF D R+ LE+ LL +SPAE+++ +P+S+QT +++ A Y A RVE +R
Sbjct: 324 DVLNGEFTDTMQRAELESRLLCISPAEIVIVEPISEQTTRLIKALYGSGADAARVEHLTR 383
Query: 315 DCFIG---GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
D GA AE S L A
Sbjct: 384 DTIESVELTGAKAEQAS-------------------------------------PLVHTA 406
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
L ++L FG I+ L A+FR L G EM LS N L+QLEVL +S G+ G+LL +
Sbjct: 407 LRAGAKYLSDFGQADILQLDAAFRPLEGVNEMKLSPNVLRQLEVL-TSSAGAYKGSLLWL 465
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
MNHT T G RLLR WV+HPL + I RLDAV + + TS G D++N
Sbjct: 466 MNHTATAMGGRLLRHWVSHPLHSKVAIERRLDAVEALRD-----LTSFEEGDLDKRN--- 517
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
+ + + L + PD+ R + R+FH TATPSEF++ + ++ G+
Sbjct: 518 -------HSTFNGLKMQLKQLPDLDRQLARVFHGTATPSEFVSALTSLSRFGEAC----- 565
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA--DQGDLLNLMIIS 609
G RE V L S LL LI + P++ A +S +N + A D+ + +
Sbjct: 566 -GNMREGVEGD-LTSTLLVELISAIADPSLRVLAETFMSALNLDVACVDKPSKTKIGLFK 623
Query: 610 NG--QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT---HLIELPANF 664
+ +F E++ AV AK+ L L+ RK+LG+ LE+ +V G+ LIE+P +
Sbjct: 624 DDPERFPELSATVAAVNDAKQALADLLPELRKKLGIPRLEYTTVGGVGGGEWLIEVPMDK 683
Query: 665 KVPLNWAKV--NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
P+ W KV N +KK +RYH PEV A+ L ANE + AAW FL F YA
Sbjct: 684 SCPVTWIKVSSNKSKKVVRYHPPEVTEAVAALERANERHMMSADAAWKEFLSSFRENYAT 743
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVP 782
F+AA ++A+LD LHALA ++RN +VRP VDD ++ GRHPVLD LLD+FVP
Sbjct: 744 FRAATSSIASLDALHALAIVARNDGYVRPELVDDTATPVLYFEEGRHPVLDAHLLDSFVP 803
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
N +L A+R +ITGPNMGGKSCYIRQ+AL+ IMAQVGSFVPA A L VLD +YTRM
Sbjct: 804 NGVDLAADRTRALVITGPNMGGKSCYIRQIALLSIMAQVGSFVPAKCARLTVLDAVYTRM 863
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD++ G STFLEE++EAS IL CT +SLVI+DELGRGTSTHDGVAIA ATL++L+
Sbjct: 864 GASDNLAMGSSTFLEEMSEASNILEACTPKSLVIMDELGRGTSTHDGVAIAAATLEHLVR 923
Query: 903 HKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
KC LFVTHYP +A D++ K + + SY V P S + +LYK+ P
Sbjct: 924 DAKCFTLFVTHYPSVARDVEAKHAANCASCFTSY-----VELPGSSDDVPRIQFLYKITP 978
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
GV+ SFG VA++A LP I A+V A++LE
Sbjct: 979 GVAHRSFGLNVARMAGLPTEVIQSASVKASELE 1011
>gi|410948910|ref|XP_003981170.1| PREDICTED: DNA mismatch repair protein Msh3 [Felis catus]
Length = 1126
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 371/947 (39%), Positives = 545/947 (57%), Gaps = 88/947 (9%)
Query: 77 PTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL 136
P PS++ T + YTPLE Q +ELK + D +L +E GYK+RFFGEDAE+AA+ L IY HL
Sbjct: 209 PKPSNKRTKSI-YTPLELQYIELKQQQKDAILCVECGYKYRFFGEDAEVAARELNIYCHL 267
Query: 137 DHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTK 196
DHNFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK
Sbjct: 268 DHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSLFSRKLTALYTK 327
Query: 197 ATLEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLG 246
+TL EDV E +N+L+C+ +D NV + G ++ +G
Sbjct: 328 STL-IGEDVNPLVKLDDAINVDEIVTDNSTNFLLCICEDQENVKDKKKG------NIFIG 380
Query: 247 VVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA-- 304
+V V+ +TG+VV+ F D R LE +L L P ELLL LS+QTE ML+ A A
Sbjct: 381 MVGVQPATGEVVFDSFQDSASRLELETRILCLQPVELLLPSHLSEQTE-MLIHRATAARV 439
Query: 305 --SNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
+RVE F A V Y +D + D+ QG+ + GI+
Sbjct: 440 RDDRIRVERMDNMYFEYSHAFQAVTEFY---AKDVV--------DI--QGSQ--SFSGII 484
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSN 421
N+ + +LA IR+LK+F LE+++ +F+ LSG ME MT++ TL+ LE+++N ++
Sbjct: 485 NLEKTVICSLAAIIRYLKEFNLEKVLSKPKNFKQLSGEMEFMTINGTTLRNLEIIQNQTD 544
Query: 422 GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESV 481
G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 545 MKTKGSLLWVLDHTKTSFGKRKLKKWVTQPLLKLREINARLDAVSEVLHSESS------- 597
Query: 482 GQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY 541
+ + L + PDI+RG+ I+H+ + EF +++ LY
Sbjct: 598 -------------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY 637
Query: 542 AGKQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
H+ E++ + + H S LL+ IL P ++ + L +N++AA
Sbjct: 638 --------HLKSEFQALIPAVNSHVRSDLLQTFILEI--PELLSPVERFLKLLNEQAAKS 687
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIE 659
GD L F + + + +Q + + RK L + ++++VSG +IE
Sbjct: 688 GDKTELFK-DLSDFPLIKKRKDEIQEVTHRIQIHLQDIRKILKNPSAQYVTVSGQEFMIE 746
Query: 660 LP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+ A +P +W KV STK R+HSP ++ +L E+L + C A W FL++F
Sbjct: 747 IKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRRLNQLREQLVLDCSAEWLDFLEDFS 806
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL- 776
+Y AV LA +DC+ +LA +++ N+ RP E +I I +GRHPV+D +L
Sbjct: 807 EHYHSLCKAVHHLATVDCIFSLAKVAKQGNYCRPTL---QEERKIMIKNGRHPVIDVLLG 863
Query: 777 -LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
D +VPN TNL + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++
Sbjct: 864 EQDQYVPNSTNLSGDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIV 923
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
DGI+TRMGA+D+I +G+STF+EEL + + I++ T+QSLVI+DELGRGTSTHDG+AIAYA
Sbjct: 924 DGIFTRMGAADNIYKGQSTFMEELTDTAEIIKQATSQSLVILDELGRGTSTHDGIAIAYA 983
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQDV 953
TL++ ++ K + LFVTHYP + +++ + VG YH+ +L + P + + V
Sbjct: 984 TLEHFIKDVKSLTLFVTHYPPVCELEKSYLQQVGNYHMGFLVNEDESKEDPGEEQVPDFV 1043
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
T+LY++ G++ S+G VA+LA +P + +A + +LE V+ +
Sbjct: 1044 TFLYQITRGIAARSYGLNVAKLADVPEEILKKAASKSKELEGLVNMK 1090
>gi|351706766|gb|EHB09685.1| DNA mismatch repair protein Msh3, partial [Heterocephalus glaber]
Length = 1071
Score = 637 bits (1642), Expect = e-179, Method: Compositional matrix adjust.
Identities = 374/950 (39%), Positives = 549/950 (57%), Gaps = 87/950 (9%)
Query: 79 PSSQTTHNKK----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA 134
PS NK+ YTPLE Q +E+K ++PD +L +E GYK+RFFGEDAE+AA+ L IY
Sbjct: 146 PSDPRALNKRSKSVYTPLELQYLEVKQQHPDAVLCVECGYKYRFFGEDAEIAARELNIYC 205
Query: 135 HLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY 194
HLDH+FMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G ++ PF R L+ALY
Sbjct: 206 HLDHSFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAVGDSRSSPFARKLTALY 265
Query: 195 TKATLEAAED----------------VGGGEDGCGGESNYLVCVVDD-DGNVGKIRNGVF 237
TK+TL ED VG E + YL+C+ +D D GK + VF
Sbjct: 266 TKSTL-IGEDILSEWNFSLIKLDDGAVGVDEVTTDASAGYLLCICEDKDSAKGKRKGSVF 324
Query: 238 GDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML 297
+GVVAV+ +TG+++ F D LR LE L SL AELLL + LS+
Sbjct: 325 -------IGVVAVQPATGELLLDAFQDTALRLELETRLCSLQLAELLLPERLSE------ 371
Query: 298 LAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA 357
++ P + V C RD I + V Y + + +DV +G+ +
Sbjct: 372 --WSHPTVSHPVLCHLRDDRIRVERMDNVYFEYSHAFQVVTEFYTKDPVDV--RGSQ--S 425
Query: 358 IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVL 416
GI+N+ + LA IR+LK+F LE+I+ +F+ LS ME MT++ TL+ LE+L
Sbjct: 426 FSGIINLEKPVICCLAAIIRYLKEFNLEKILSKPENFKQLSSEMELMTMNGTTLRNLEIL 485
Query: 417 RNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYR 476
+N ++G G+LL +++HT T +G RLLR+WVTHPL + I+ARL AVSE+ S S
Sbjct: 486 QNQTDGKSKGSLLWVLDHTHTAFGRRLLRKWVTHPLLRLSEINARLCAVSEVLGSESS-- 543
Query: 477 TSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVM 536
+ + + + L + PD++RG+ I+HR + EF ++
Sbjct: 544 ------------------------VFAQIESLLQKLPDMERGLGSIYHRKCSTQEFFLIV 579
Query: 537 QAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA 596
+ + + +LQ L V + + S LL+ ++L P ++ L ++++A
Sbjct: 580 RTLCHLKSELQVLM-------PVVNSHVQSDLLRMIVLEI--PELLSPVEHYLKILSEQA 630
Query: 597 ADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
A GD L F + + + +Q ++ + + RK L + ++++VSG
Sbjct: 631 AKIGDKTELFK-DLSDFPLIKKRKDEIQDVTAKIQTHLQEIRKILKNPSAQYVTVSGQEF 689
Query: 657 LIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
+IE+ A +P +W KV STK R+HSP V+ + L E+L + C A W FL+
Sbjct: 690 MIEVKNSAVSCIPPDWVKVGSTKAVSRFHSPLVVESYRLLQQLREQLVLDCNAEWLRFLE 749
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
FG +Y AV+ LA +DC+ +LA +++ ++ RP+ ++ +I I +GRHPV+D
Sbjct: 750 SFGEHYHSLCKAVRHLATIDCIFSLAKVAKQGDYCRPMVKEER---KIIIKNGRHPVIDV 806
Query: 775 IL--LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
+L D +VPN T L + E I+TGPNMGGKS YI+QVALI +MAQVGS+VPA A +
Sbjct: 807 LLGEQDQYVPNSTRLSEDSERVMIVTGPNMGGKSSYIKQVALITLMAQVGSYVPAEEATV 866
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
++DGIYTRMGA+DSI QGRSTF+EEL + + I+R T +SLVI+DELGRGTSTHDG+AI
Sbjct: 867 GIVDGIYTRMGAADSIYQGRSTFMEELTDTAEIIRKATPRSLVILDELGRGTSTHDGIAI 926
Query: 893 AYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK--VMGPMDSKSD 950
AYATL+Y + K + LFVTHYP + +++ + G VG YH+ +L + GP +
Sbjct: 927 AYATLEYFIRDIKSLTLFVTHYPPLCELERSYPGQVGNYHMGFLVTKDEGQAGPGKEEVP 986
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
VT+LY++ GV+ S+G VA+LA +P + +A + +LE ++ +
Sbjct: 987 DFVTFLYQITRGVAARSYGLNVAKLADVPGEVLKKAAHKSKELEGLINMK 1036
>gi|355750038|gb|EHH54376.1| hypothetical protein EGM_15199, partial [Macaca fascicularis]
Length = 1121
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 365/934 (39%), Positives = 541/934 (57%), Gaps = 86/934 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 215 YTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 274
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDV--G 206
RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL ED+ G
Sbjct: 275 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDILFG 333
Query: 207 GGEDGCGGE-------SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
+D + ++YL+C+ ++ NV + G+ V +G+V V+ +TG+VV+
Sbjct: 334 QLDDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGI------VFIGIVGVQPATGEVVF 387
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASRD 315
F D RS LE + +L P ELLL LS+QTE ML+ A S +RVE
Sbjct: 388 DSFQDSASRSELETRMSNLQPVELLLPSALSEQTE-MLIHRATSVSVQDDRIRVERMDNI 446
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
F A V Y +DT+ Q I GI+N+ + +LA
Sbjct: 447 YFEYSHAFQAVTEFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAI 491
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
I++LK+F LE+++ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++H
Sbjct: 492 IKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDH 551
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 552 TKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS-------------------- 591
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+ + L + PDI+RG+ I+H+ + EF +++ + H+ E
Sbjct: 592 ------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLY---------HLKSE 636
Query: 555 YREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
++ + + H S LL+ +IL P ++ L +N++AA GD L
Sbjct: 637 FQAIIPAVNSHVQSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSD 693
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNW 670
F + + + +Q +++ + RK L + ++++VSG +IE+ A +P +W
Sbjct: 694 FPLIKKRKDEIQGVSDKIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDW 753
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
KV STK R+HSP V+ L E+L + C A W FL++F +Y AV L
Sbjct: 754 VKVGSTKAVSRFHSPFVVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHYLCKAVHHL 813
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLH 788
A +DC+ +LA +++ N+ RP E +I I +GRHPV+D +L D +VPN T+L
Sbjct: 814 ATVDCIFSLAKVAKQGNYCRPTV---QEERKIIIKNGRHPVIDVLLGEQDQYVPNSTDLS 870
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I
Sbjct: 871 EDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNI 930
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
+GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K +
Sbjct: 931 YKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLT 990
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LFVTHYP + +++ ++ VG YH+ +L S + P + + VT+LY++ G++
Sbjct: 991 LFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESKLDPGEEQVPDFVTFLYQITRGIAAR 1050
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA +P + +A + +LE ++++
Sbjct: 1051 SYGLNVAKLADIPGEILKKAAHKSKELEGLINTK 1084
>gi|403256359|ref|XP_003920848.1| PREDICTED: DNA mismatch repair protein Msh3 [Saimiri boliviensis
boliviensis]
Length = 1123
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 365/935 (39%), Positives = 541/935 (57%), Gaps = 87/935 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 216 YTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 275
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV
Sbjct: 276 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPL 334
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E ++YL+C+ +++ NV G +V +G+V V+ +TG+VV
Sbjct: 335 IKLDDAVNVDEVMTDTSTSYLLCISENNENVRDKNKG------NVFIGIVGVQPATGEVV 388
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D RS LE + SL P ELLL LSKQTE ML+ A S +RVE
Sbjct: 389 FDSFQDSASRSELETRMSSLQPVELLLPSALSKQTE-MLIHRATSVSVRDDRIRVERMDN 447
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y +DT V +G+ I GI+N+ + +LA
Sbjct: 448 TYFEYSHAFQAVTEFY---AKDT----------VDFKGS--KIISGIINLEKSVICSLAA 492
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
I++L++F LE+++ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++
Sbjct: 493 IIKYLREFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLD 552
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 553 HTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS------------------- 593
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PDI+RG+ I+H+ + EF +++ + H+
Sbjct: 594 -------VFGQIENHLHKLPDIERGLCSIYHKKCSTQEFFLIVKTLY---------HLKS 637
Query: 554 EYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
E++ + + H S LL+ +IL P ++ L +N++AA GD L
Sbjct: 638 EFQAIIPAVNSHVQSDLLRTIILEI--PELLSTVEHYLKILNEQAAKVGDKTELFK-DLS 694
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLN 669
F + + + +Q +++ + RK L + ++++VSG +IE+ A +P +
Sbjct: 695 DFPLIKKRKDEIQGVSDKIRIHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTD 754
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W KV STK R+H+P ++ L E+L + C A W FL++F +Y AV
Sbjct: 755 WVKVGSTKAVSRFHTPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVDH 814
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNL 787
LA +DC+ +LA +++ ++ RP E +I I +GRHPV+D +L D +VPN T+L
Sbjct: 815 LATIDCIFSLAKVAKQGDYCRPTV---QEERKILIKNGRHPVIDVLLGEQDQYVPNSTDL 871
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+
Sbjct: 872 SEDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADN 931
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K +
Sbjct: 932 IYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSL 991
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LFVTHYP + +++ ++ VG YH+ +L S + P + + VT+LY++ G++E
Sbjct: 992 TLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESRLPPGEEQVPDFVTFLYQITRGIAE 1051
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA +P + +A + +LE ++++
Sbjct: 1052 RSYGLNVAKLADVPGEILKKAAHKSKELEGLINTK 1086
>gi|109077790|ref|XP_001110439.1| PREDICTED: DNA mismatch repair protein Msh3 [Macaca mulatta]
Length = 1124
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 365/935 (39%), Positives = 538/935 (57%), Gaps = 87/935 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 217 YTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 276
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV
Sbjct: 277 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPL 335
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E ++YL+C+ ++ NV + G+ V +G+V V+ +TG+VV
Sbjct: 336 IKLDDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGI------VFIGIVGVQPATGEVV 389
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D RS LE + +L P ELLL LS+QTE ML+ A S +RVE
Sbjct: 390 FDSFQDSASRSELETRMSNLQPVELLLPSALSEQTE-MLIHRATSVSVQDDRIRVERMDN 448
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y +DT+ Q I GI+N+ + +LA
Sbjct: 449 IYFEYSHAFQAVTEFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAA 493
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
I++LK+F LE+++ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++
Sbjct: 494 IIKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLD 553
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 554 HTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS------------------- 594
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PDI+RG+ I+H+ + EF +++ + H+
Sbjct: 595 -------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLY---------HLKS 638
Query: 554 EYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
E++ + + H S LL+ +IL P ++ L +N++AA GD L
Sbjct: 639 EFQAIIPAVNSHVQSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLS 695
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLN 669
F + + + +Q +++ + RK L + ++++VSG +IE+ A +P +
Sbjct: 696 DFPLIKKRKDEIQGVSDKIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTD 755
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W KV STK R+HSP V+ L E+L + C A W FL++F +Y AV
Sbjct: 756 WVKVGSTKAVSRFHSPFVVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHYLCKAVHH 815
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNL 787
LA +DC+ +LA +++ N+ RP E +I I +GRHPV+D +L D +VPN T+L
Sbjct: 816 LATVDCIFSLAKVAKQGNYCRPTV---QEERKIIIKNGRHPVIDVLLGEQDQYVPNSTDL 872
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+
Sbjct: 873 SEDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADN 932
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K +
Sbjct: 933 IYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSL 992
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LFVTHYP + +++ ++ VG YH+ +L S + P + + VT+LY++ G++
Sbjct: 993 TLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESKLDPGEEQVPDFVTFLYQITRGIAA 1052
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA +P + +A + +LE ++++
Sbjct: 1053 RSYGLNVAKLADIPGEILKKAAHKSKELEGLINTK 1087
>gi|149727014|ref|XP_001503905.1| PREDICTED: DNA mismatch repair protein Msh3 [Equus caballus]
Length = 1128
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 372/951 (39%), Positives = 540/951 (56%), Gaps = 99/951 (10%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
PS++ T + YTPLE Q +E+K + D +L +E GYK+RFFGEDAE+AA+ L IY HLDH
Sbjct: 212 PSNKRTKSI-YTPLELQYIEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDH 270
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
NFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+T
Sbjct: 271 NFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSLFSRKLTALYTKST 330
Query: 199 LEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
L EDV E ++YL+C+ ++ NV + G ++ +G+V
Sbjct: 331 L-IGEDVNPLVKLDDAVNVDEIITDTSTSYLLCICENKENVKDKKKG------NIFIGLV 383
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS--- 305
V+ +TG+VV+ F D RS LE +LSL P ELLL LS+QTE +L+ A S
Sbjct: 384 GVQPATGEVVFDSFQDSASRSELETRILSLQPVELLLPSTLSEQTE-LLIRRATAVSVRD 442
Query: 306 -NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
+RVE F A V Y +D + Q + GI+N+
Sbjct: 443 DRIRVERMDNMYFEYSHAFQMVTEFY---AKDVVDVKGSQ------------SFSGIINL 487
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGS 423
+ +LA IR+LK F LE+++ +F+ SG ME MT++ TL+ LE+L+N ++
Sbjct: 488 EKAVICSLAAIIRYLKDFNLEKVLSKPKNFKQFSGEMEFMTINGTTLRNLEILQNQTDMK 547
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ Y S GQ
Sbjct: 548 TKGSLLWVLDHTKTAFGRRKLKKWVTQPLLKIRDINARLDAVSEVL-----YSESSVFGQ 602
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
+ L + PDI+RG+ I+H+ + EF +++ +
Sbjct: 603 ---------------------IENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLH--- 638
Query: 544 KQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
H+ E++ V + H S LL+ IL P ++ + L +N++AA GD
Sbjct: 639 ------HLKSEFQALVPAVNSHVQSDLLRTFILEI--PELLSPVERYLKILNEQAAKIGD 690
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
L F + + + +Q + + RK + + ++++VSG LIE+
Sbjct: 691 KTELFK-DLSDFPLIKKRKDEIQEVTHRIQRHLQEIRKIIKNPSAQYVTVSGQEFLIEVK 749
Query: 662 --ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
A +P +W K+ STK R+HSP V+ L E+L + C A W FL+ F +
Sbjct: 750 NSAVSCIPTDWVKIGSTKAVSRFHSPFVVENYRHLNQLREQLVLDCSAEWLEFLENFSEH 809
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--L 777
Y AV LA +DC+ +LA +++ ++ RP E +I I +GRHPV+D +L
Sbjct: 810 YHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPTL---QEERKILIKNGRHPVIDVLLGEQ 866
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D +VPN TNL + E IITGPNMGGKS YI+QVALI +MAQ+GS+VPA A + ++DG
Sbjct: 867 DQYVPNSTNLSGDSERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIVDG 926
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TRMGA+D+I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL
Sbjct: 927 IFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATL 986
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD----- 952
++ + K + LFVTHYP + +++ ++ VG YH+ +L + DSK DQ
Sbjct: 987 EHFIRDVKSLTLFVTHYPPVCELERSYSQQVGNYHMGFLVNED-----DSKPDQGEEEQV 1041
Query: 953 ---VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
VT+LY++ G++ S+G VA+LA +P + +A + +LE V+ +
Sbjct: 1042 PDFVTFLYQITKGIAARSYGLNVAKLADVPGEILKKAASKSKELEGLVNMK 1092
>gi|281350300|gb|EFB25884.1| hypothetical protein PANDA_004330 [Ailuropoda melanoleuca]
Length = 1074
Score = 633 bits (1633), Expect = e-178, Method: Compositional matrix adjust.
Identities = 362/944 (38%), Positives = 540/944 (57%), Gaps = 84/944 (8%)
Query: 77 PTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL 136
P PS++ T + YTPLE Q +ELK + D +L +E GYK+RFFGEDAE+AA+ L IY HL
Sbjct: 194 PKPSNKRTKSI-YTPLELQYIELKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHL 252
Query: 137 DHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTK 196
DHNFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+ALYTK
Sbjct: 253 DHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAVGDNRSSLFSRKLTALYTK 312
Query: 197 ATLEAAEDVGGGEDGCG-------GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
+TL + + +D +++L+C+ ++ N+ + G ++ +G+V
Sbjct: 313 STLIGEDILFKVDDAVNVDEIITDSSTSFLLCICENKENIKDKKKG------NIFIGIVG 366
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS---- 305
V+ +TG+VV+ F D RS LE +L L P ELLL LS+QTE L+ A AS
Sbjct: 367 VQPATGEVVFDSFQDSASRSELETRILCLQPVELLLPSHLSEQTE-ALIHRATAASVRDD 425
Query: 306 NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP 365
+RVE F A V Y D ++ + GI+N+
Sbjct: 426 RIRVERMDNMYFDYSHAFQAVTEFYAKDAVDIQASQ---------------SFSGIINLE 470
Query: 366 DLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSE 424
+ +LA IR+LK+F LE+++ +F+ LSG ME MT++ TL+ LE+L+N ++
Sbjct: 471 KPVICSLAAIIRYLKEFNLEKVLSKPKNFKQLSGEMEFMTINGTTLRNLEILQNQTDMKT 530
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 531 KGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS---------- 580
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+ + L + PDI+RG+ I+H+ + EF +++ LY
Sbjct: 581 ----------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--- 620
Query: 545 QLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
H+ E++ + + H S LL+ IL P ++ L +N++AA GD
Sbjct: 621 -----HLKSEFQALIPAVNSHVRSDLLQTFILEI--PELLSPVEHYLRILNEQAAKTGDK 673
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP- 661
L F + + + +Q +++ + RK L ++ +++VSG +IE+
Sbjct: 674 TELFK-DLTDFPLIKKRKDEIQEVTDKIQIHLQEIRKILKNPSIRYVTVSGQEFMIEMKN 732
Query: 662 -ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
A +P +W KV STK R+HSP ++ L E+L + C A W FL+ F +Y
Sbjct: 733 SAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFSEHY 792
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LD 778
AV LA +DC+ +LA +++ ++ RP E +I I +GRHPV+D +L D
Sbjct: 793 HSLCKAVHHLATIDCIFSLAKVAKQGDYCRPTL---QEERKIVIKNGRHPVIDVLLGEQD 849
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
+VPN TNL + E IITGPNMGGKS YI+QVALI +MAQ+GS+VPA A + ++DGI
Sbjct: 850 QYVPNSTNLSGDSERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIVDGI 909
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TRMGA+D+I +G+STF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+
Sbjct: 910 FTRMGAADNIYKGQSTFMEELTDTAEIIRQATSQSLVILDELGRGTSTHDGIAIAYATLE 969
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQDVTYL 956
+ + K + LFVTHYP + +++ + VG YH+ +L + P + + VT+L
Sbjct: 970 HFIRDVKSLTLFVTHYPPVCELEKSYLQQVGNYHMGFLVNEDESKEDPGEEQVPDFVTFL 1029
Query: 957 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
Y++ G++ S+G VA+LA +P +++A + +LE V+ +
Sbjct: 1030 YQITRGIAARSYGLNVAKLADVPGEILTKAASKSKELEGLVNMK 1073
>gi|301761694|ref|XP_002916275.1| PREDICTED: DNA mismatch repair protein Msh3-like, partial [Ailuropoda
melanoleuca]
Length = 1123
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 365/947 (38%), Positives = 540/947 (57%), Gaps = 88/947 (9%)
Query: 77 PTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL 136
P PS++ T + YTPLE Q +ELK + D +L +E GYK+RFFGEDAE+AA+ L IY HL
Sbjct: 206 PKPSNKRTKSI-YTPLELQYIELKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHL 264
Query: 137 DHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTK 196
DHNFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+ALYTK
Sbjct: 265 DHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAVGDNRSSLFSRKLTALYTK 324
Query: 197 ATLEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLG 246
+TL EDV E +++L+C+ ++ N+ + G ++ +G
Sbjct: 325 STL-IGEDVNPLVKVDDAVNVDEIITDSSTSFLLCICENKENIKDKKKG------NIFIG 377
Query: 247 VVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS- 305
+V V+ +TG+VV+ F D RS LE +L L P ELLL LS+QTE L+ A AS
Sbjct: 378 IVGVQPATGEVVFDSFQDSASRSELETRILCLQPVELLLPSHLSEQTE-ALIHRATAASV 436
Query: 306 ---NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
+RVE F A V Y D ++ + GI+
Sbjct: 437 RDDRIRVERMDNMYFDYSHAFQAVTEFYAKDAVDIQASQ---------------SFSGII 481
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSN 421
N+ + +LA IR+LK+F LE+++ +F+ LSG ME MT++ TL+ LE+L+N ++
Sbjct: 482 NLEKPVICSLAAIIRYLKEFNLEKVLSKPKNFKQLSGEMEFMTINGTTLRNLEILQNQTD 541
Query: 422 GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESV 481
G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 542 MKTKGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS------- 594
Query: 482 GQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY 541
+ + L + PDI+RG+ I+H+ + EF +++ LY
Sbjct: 595 -------------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY 634
Query: 542 AGKQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
H+ E++ + + H S LL+ IL P ++ L +N++AA
Sbjct: 635 --------HLKSEFQALIPAVNSHVRSDLLQTFILEI--PELLSPVEHYLRILNEQAAKT 684
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIE 659
GD L F + + + +Q +++ + RK L ++ +++VSG +IE
Sbjct: 685 GDKTELFK-DLTDFPLIKKRKDEIQEVTDKIQIHLQEIRKILKNPSIRYVTVSGQEFMIE 743
Query: 660 LP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+ A +P +W KV STK R+HSP ++ L E+L + C A W FL+ F
Sbjct: 744 MKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFS 803
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL- 776
+Y AV LA +DC+ +LA +++ ++ RP E +I I +GRHPV+D +L
Sbjct: 804 EHYHSLCKAVHHLATIDCIFSLAKVAKQGDYCRPTL---QEERKIVIKNGRHPVIDVLLG 860
Query: 777 -LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
D +VPN TNL + E IITGPNMGGKS YI+QVALI +MAQ+GS+VPA A + ++
Sbjct: 861 EQDQYVPNSTNLSGDSERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIV 920
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
DGI+TRMGA+D+I +G+STF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYA
Sbjct: 921 DGIFTRMGAADNIYKGQSTFMEELTDTAEIIRQATSQSLVILDELGRGTSTHDGIAIAYA 980
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQDV 953
TL++ + K + LFVTHYP + +++ + VG YH+ +L + P + + V
Sbjct: 981 TLEHFIRDVKSLTLFVTHYPPVCELEKSYLQQVGNYHMGFLVNEDESKEDPGEEQVPDFV 1040
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
T+LY++ G++ S+G VA+LA +P +++A + +LE V+ +
Sbjct: 1041 TFLYQITRGIAARSYGLNVAKLADVPGEILTKAASKSKELEGLVNMK 1087
>gi|426230068|ref|XP_004009104.1| PREDICTED: DNA mismatch repair protein Msh3 [Ovis aries]
Length = 1119
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 362/943 (38%), Positives = 535/943 (56%), Gaps = 83/943 (8%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
PS++ T + YTPLE Q +E+K + D +L +E GYK+RFFGEDAE+AA+ L IY HLDH
Sbjct: 207 PSNKRTKSI-YTPLELQYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDH 265
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
NFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+T
Sbjct: 266 NFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSLFSRKLTALYTKST 325
Query: 199 LEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
L EDV E ++YL+C+ ++ NV + G +V +G+V
Sbjct: 326 L-IGEDVNPLVKLDDAVNVDEVMTDTSTSYLLCICENKENVKDKKKG------NVSIGIV 378
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPAS 305
V+ +TG+VV+ F D RS LE +L L P ELLL LS+QTE ++ A +
Sbjct: 379 GVQPATGEVVFDSFQDSASRSELETRILCLQPVELLLPSDLSEQTETLIHRVTAMSVRDD 438
Query: 306 NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP 365
+RVE F A EV Y +D + + Q + I+N+
Sbjct: 439 RIRVERMKNVYFEYSHAFQEVTEFY---AKDVVDIKDSQ------------SFSDIINLE 483
Query: 366 DLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSE 424
+ +LA IR+LK+F LE+++ +F+ LSG ME MT++ TL+ LE+L+N ++
Sbjct: 484 KPVICSLAAIIRYLKEFNLEKVLSKPKNFKQLSGEMEFMTINGTTLRNLEILQNQTDMKT 543
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 544 KGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS---------- 593
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+ + L + PDI+RG+ I+H+ + EF +++ + +
Sbjct: 594 ----------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLYHLKS 637
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+ Q L V + + S LL+ IL P ++ L +N++AA GD
Sbjct: 638 EFQALI-------PVVNSHVESELLQTFILEI--PELLSPVEHYLKILNEQAAKTGDKTE 688
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--A 662
L F + + + +Q ++ + + RK L + ++++VSG +IE+ A
Sbjct: 689 LFK-DLSDFPLIKKRKDEIQDVTNKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKNSA 747
Query: 663 NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
+P +W KV STK R+HSP ++ L E+L + C A W +FL+ F +Y
Sbjct: 748 VSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLAFLENFSEHYHT 807
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNF 780
AV LA +DC+ +LA +++ + RP E +I I +GRHPV+D +L D F
Sbjct: 808 LCKAVHHLATIDCIFSLAKVAKQGVYCRPTL---QEERKILIKNGRHPVIDVLLGEQDQF 864
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPN T+L + E IITGPNMGGKS YI+QVALI +MAQVGS+VPA A + ++DGI+T
Sbjct: 865 VPNSTDLSGDSERVMIITGPNMGGKSSYIKQVALITVMAQVGSYVPAEEATIGIVDGIFT 924
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA+D+I +G+STF+EEL + + I+R T QSLVI+DELGRGTSTHDG+AIAYATL++
Sbjct: 925 RMGAADNIYKGQSTFMEELTDTAEIIRKATPQSLVILDELGRGTSTHDGIAIAYATLEHF 984
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ---DVTYLY 957
+ + + LFVTHYP + +++ ++ VG YH+ +L + + DQ V +LY
Sbjct: 985 IRDVESLTLFVTHYPPVCELEKSYSQQVGNYHMGFLVNEDESKQDAGEEDQVPDSVIFLY 1044
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
++ G++ S+G VA+LA +P + +A + +LE V+ +
Sbjct: 1045 QITRGIAARSYGLNVAKLADVPGEILKKAASKSKELEGLVNMK 1087
>gi|397503403|ref|XP_003822314.1| PREDICTED: DNA mismatch repair protein Msh3 [Pan paniscus]
Length = 1131
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 368/960 (38%), Positives = 545/960 (56%), Gaps = 96/960 (10%)
Query: 69 SPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAK 128
S L + S+ YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+
Sbjct: 203 SHENLQKTASKSANKWSKSIYTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAAR 262
Query: 129 VLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
L IY HLDHNFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R
Sbjct: 263 ELNIYCHLDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSR 322
Query: 189 GLSALYTKATLEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFG 238
L+ALYTK+TL EDV E ++YL+C+ ++ NV + G
Sbjct: 323 KLTALYTKSTL-IGEDVNPLIKLDDAVNVDEIMTDTSTSYLLCISENKENVRDKKKG--- 378
Query: 239 DGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML- 297
++ +G+V V+ +TG+VV+ F D RS LE + SL P ELLL LS+QTE ++
Sbjct: 379 ---NIFIGIVGVQPATGEVVFDSFQDSASRSELETRMSSLQPVELLLPSALSEQTEALIH 435
Query: 298 --LAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
+ + +RVE F A V Y +DT+ Q
Sbjct: 436 RATSVSVQDDRIRVERMDNIYFEYSHAFQAVTEFY---AKDTVDIKGSQ----------- 481
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLE 414
I GI+N+ + +LA I++LK+F LE+++ +F+ LS ME MT++ TL+ LE
Sbjct: 482 -IISGIVNLEKPVICSLAAIIKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLE 540
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGS 474
+L+N ++ G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 541 ILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS 600
Query: 475 YRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA 534
+ + L + PDI+RG+ I+H+ + EF
Sbjct: 601 --------------------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFL 634
Query: 535 VMQAILYAGKQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTV 592
+++ LY H+ E++ + + H S LL+ +IL P ++ L +
Sbjct: 635 IVKT-LY--------HLKSEFQAIIPAVNSHIQSDLLRTVILEI--PELLSPVEHYLKIL 683
Query: 593 NKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
N++AA GD L F + + + +Q +E+ + RK L + ++++VS
Sbjct: 684 NEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQGVIDEIRMHLQEIRKILKNPSAQYVTVS 742
Query: 653 GITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
G +IE+ A +P +W KV STK R+HSP ++ L E+L + C A W
Sbjct: 743 GQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWL 802
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
FL++F +Y AV LA +DC+ +LA +++ ++ RP E +I I +GRHP
Sbjct: 803 DFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPTV---QEERKIVIKNGRHP 859
Query: 771 VLDTIL--LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
V+D +L D +VPN+T+L + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA
Sbjct: 860 VIDVLLGEQDQYVPNNTDLSEDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAE 919
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
A + ++DGI+TRMGA+D+I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHD
Sbjct: 920 EATIGIVDGIFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHD 979
Query: 889 GVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
G+AIAYATL+Y + K + LFVTHYP + +++ ++ VG YH+ +L S +SK
Sbjct: 980 GIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSED-----ESK 1034
Query: 949 SDQD--------VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
D D VT+LY++ G++ S+G VA+LA +P + +A + +LE ++++
Sbjct: 1035 LDPDAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLINTK 1094
>gi|197097574|ref|NP_001125043.1| DNA mismatch repair protein Msh3 [Pongo abelii]
gi|55726784|emb|CAH90153.1| hypothetical protein [Pongo abelii]
Length = 1023
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 362/936 (38%), Positives = 540/936 (57%), Gaps = 88/936 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 115 YTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 174
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV
Sbjct: 175 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPL 233
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E ++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV
Sbjct: 234 IKLDDAVNVDEIMTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVV 287
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRD 315
+ F D RS LE + SL P ELLL LS+QTE ++ + + +RVE
Sbjct: 288 FDSFQDSASRSELETRMSSLQPVELLLPSALSEQTEALIHRTTSVSVQDDRIRVERMDNI 347
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
F A V Y +DT+ Q I GI+N+ + +LA
Sbjct: 348 YFEYSHAFQAVTEFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAI 392
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
I++LK+F LE+++ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++H
Sbjct: 393 IKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDH 452
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 453 TKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS-------------------- 492
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+ + L + PDI+RG+ I+H+ + EF +++ LY H+ E
Sbjct: 493 ------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--------HLKSE 537
Query: 555 YREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
++ + + H S LL+ +IL P ++ L +N++AA GD L
Sbjct: 538 FQAIIPAVNSHIQSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSD 594
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNW 670
F + + + +Q +E+ + RK L + ++++VSG +IE+ A +P +W
Sbjct: 595 FPLIKKRKDEIQGVIDEIQMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDW 654
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
KV STK R+HSP ++ L E+L + C A W FL++F +Y AV L
Sbjct: 655 VKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHL 714
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLH 788
A +DC+ +LA +++ ++ RP E +I I +GRHPV+D +L D +VPN+T+L
Sbjct: 715 ATVDCIFSLAKVAKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLS 771
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I
Sbjct: 772 EDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNI 831
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
+GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K +
Sbjct: 832 YKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLT 891
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD----VTYLYKVVPGVS 964
LFVTHYP + +++ ++ VG YH+ +L S +D +++ VT+LY++ G++
Sbjct: 892 LFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDA-SKLDPGTEEQVPDFVTFLYQITRGIA 950
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA +P + +A + +LE ++++
Sbjct: 951 ARSYGLNVAKLADVPGEILKKAAHKSKELEGLINTK 986
>gi|344272419|ref|XP_003408029.1| PREDICTED: DNA mismatch repair protein Msh3 [Loxodonta africana]
Length = 1111
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/949 (38%), Positives = 538/949 (56%), Gaps = 83/949 (8%)
Query: 72 TLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLG 131
TL P PS++ T + YTPLE Q +E+K ++ DV+L +E GYK+RFFG+DAE+AA+ L
Sbjct: 190 TLTSDPKPSNKRTKSI-YTPLELQYIEMKQQHKDVILFVECGYKYRFFGDDAEIAARELN 248
Query: 132 IYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS 191
IY HLDHNFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+
Sbjct: 249 IYCHLDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSTVFSRKLT 308
Query: 192 ALYTKATLEAAEDVG---GGEDGCGGE-------SNYLVCVVDDDGNVGKIRNGVFGDGF 241
ALYTK+TL EDV +D + +NYL+C+ ++ V + G
Sbjct: 309 ALYTKSTL-IGEDVNPLIKLDDAVNVDEIITDTYTNYLLCICENRDTVKDKKKGT----- 362
Query: 242 DVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYA 301
+ +G+V V+ +TG+VV+ F D RS LE +L L P ELLL LS+QT ++
Sbjct: 363 -ISIGIVGVQPATGEVVFDSFQDSASRSELETRILCLQPVELLLPSGLSEQTATLIRRVT 421
Query: 302 GPA---SNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAI 358
+ +RVE F A V+ Y D + QN
Sbjct: 422 AASVRDDRIRVERMDNIYFEYSCAFQTVIDFY---AYDIVDAKGSQNFS----------- 467
Query: 359 EGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLR 417
GIMN+ + +LA IR+LK+F LE+++ +F+ LS ME MT++ TL+ LE+L+
Sbjct: 468 -GIMNLEKPVICSLAAIIRYLKEFNLEKMLSKPKNFKQLSSEMEFMTINGTTLRNLEILQ 526
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N +N +G+LL +++HT T +G R L++WVT PL I+ RLDAVSE+ S +
Sbjct: 527 NQANMKTHGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINTRLDAVSEVLHSEST--- 583
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
+ + L + PDI+RG+ I+H+ + EF +++
Sbjct: 584 -----------------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVK 620
Query: 538 AILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA 597
+ + + Q L + + S LL+ IL P ++ L +N+ AA
Sbjct: 621 TLYHLMLEFQSLI-------PAANSHIQSQLLQTFILEI--PELLSPVEHYLKILNEHAA 671
Query: 598 DQGDLLNLMI-ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
GD L +SN F + + ++ +Q ++ + R+ L + ++++VSG
Sbjct: 672 KIGDKTELFKDLSN--FPLIKKRKEEIQEITNKIQIHLQEIRRILKNPSAQYVTVSGQEF 729
Query: 657 LIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
+IE+ A +P +W KV STK R+HSP ++ L E+L + C W FL+
Sbjct: 730 MIEVKNSALSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSTEWLGFLE 789
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
F +Y AV LA +DC+ +LA +++ N+ RP E +I I +GRHPV+D
Sbjct: 790 NFNEHYHSLCNAVYHLATIDCIFSLANVAKQGNYCRPTL---QEGRKIIIKNGRHPVIDM 846
Query: 775 ILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHV 834
+L + +VPN+TNL + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + +
Sbjct: 847 LLGEQYVPNNTNLSGDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATVGI 906
Query: 835 LDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAY 894
+DGI+TRMGA+D+I +G+STF+EEL E + I+R T+QSLVI+DELGRGTSTHDG+AIAY
Sbjct: 907 VDGIFTRMGAADNICKGQSTFMEELTETAEIIRKATSQSLVILDELGRGTSTHDGIAIAY 966
Query: 895 ATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ--- 951
ATL++ + K + LFVTHYP + +++ ++ VG YH+ +L + K +Q
Sbjct: 967 ATLEHFIRDVKSLTLFVTHYPPVCELEKSYSQQVGNYHMGFLVNEDESKEDPGKEEQIPS 1026
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
VT+LY++ G++ S+G VA+LA +P + A + LE V+ +
Sbjct: 1027 SVTFLYQITRGIAGRSYGLNVAKLADVPGEILKTAARKSKDLEGLVNMK 1075
>gi|410297266|gb|JAA27233.1| mutS homolog 3 [Pan troglodytes]
Length = 1131
Score = 630 bits (1626), Expect = e-177, Method: Compositional matrix adjust.
Identities = 366/955 (38%), Positives = 545/955 (57%), Gaps = 86/955 (9%)
Query: 69 SPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAK 128
S L + S+ YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+
Sbjct: 203 SHENLQKTASKSANKRSKSIYTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAAR 262
Query: 129 VLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
L IY HLDHNFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R
Sbjct: 263 ELNIYCHLDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSR 322
Query: 189 GLSALYTKATLEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFG 238
L+ALYTK+TL EDV E ++YL+C+ ++ NV + G
Sbjct: 323 KLTALYTKSTL-IGEDVNPLIKLDDAVNVDEIMTDTSTSYLLCISENKENVRDKKKG--- 378
Query: 239 DGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML- 297
++ +G+V V+ +TG+VV+ F D RS LE + SL P ELLL LS+QTE ++
Sbjct: 379 ---NIFIGIVGVQPATGEVVFDSFQDSASRSELETRMSSLQPVELLLPSALSEQTEALIH 435
Query: 298 --LAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
+ + +RVE F A V Y +DT+ Q
Sbjct: 436 RATSVSVQDDRIRVERMDNIYFEYSHAFQAVTEFY---AKDTVDIKGSQ----------- 481
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLE 414
I GI+N+ + +LA I++LK+F LE+++ +F+ LS ME MT++ TL+ LE
Sbjct: 482 -IISGIVNLEKPVICSLAAIIKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLE 540
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGS 474
+L+N ++ G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 541 ILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS 600
Query: 475 YRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA 534
+ + L + PDI+RG+ I+H+ + EF
Sbjct: 601 --------------------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFL 634
Query: 535 VMQAILYAGKQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTV 592
+++ LY H+ E++ + + H S LL+ +IL P ++ L +
Sbjct: 635 IVKT-LY--------HLKSEFQAIIPAVNSHIQSDLLRTVILEI--PELLSPVEHYLKIL 683
Query: 593 NKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
N++AA GD L F + + + +Q +E+ + RK L + ++++VS
Sbjct: 684 NEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQGVIDEIRMHLQEIRKILKNPSAQYVTVS 742
Query: 653 GITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
G +IE+ A +P +W KV STK R+HSP ++ L E+L + C A W
Sbjct: 743 GQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWL 802
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
FL++F +Y AV LA +DC+ +LA +++ ++ RP E +I I +GRHP
Sbjct: 803 DFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPTV---QEERKIVIKNGRHP 859
Query: 771 VLDTIL--LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
V+D +L D +VPN+T+L + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA
Sbjct: 860 VIDVLLGEQDQYVPNNTDLSEDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAE 919
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
A + ++DGI+TRMGA+D+I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHD
Sbjct: 920 EATIGIVDGIFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHD 979
Query: 889 GVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMD 946
G+AIAYATL+Y + K + LFVTHYP + +++ ++ VG YH+ +L S + P
Sbjct: 980 GIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESKLDPGA 1039
Query: 947 SKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
++ D VT+LY++ G++ S+G VA+LA +P + +A + +LE ++++
Sbjct: 1040 AEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLINTK 1094
>gi|120660370|gb|AAI30435.1| MutS homolog 3 (E. coli) [Homo sapiens]
Length = 1137
Score = 630 bits (1626), Expect = e-177, Method: Compositional matrix adjust.
Identities = 372/983 (37%), Positives = 556/983 (56%), Gaps = 89/983 (9%)
Query: 44 VSFSPAKRKVV---SSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELK 100
VS +KR++ ++LF S L + S+ YTPLE Q +E+K
Sbjct: 181 VSSEDSKRQINQKDTTLFDLSQFGSSNTSHENLQKTASKSANKRSKSIYTPLELQYIEMK 240
Query: 101 TKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNA 160
++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT RL VHVRRLV
Sbjct: 241 QQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAK 300
Query: 161 GFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG----------GED 210
G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV E
Sbjct: 301 GYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPLIKLDDAVNVDEI 359
Query: 211 GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV+ F D RS
Sbjct: 360 MTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVVFDSFQDSASRSE 413
Query: 271 LEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE + SL P ELLL LS+QTE ++ + + +RVE F A V
Sbjct: 414 LETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYFEYSHAFQAVT 473
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
Y +DT+ Q I GI+N+ + +LA I++LK+F LE++
Sbjct: 474 EFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAIIKYLKEFNLEKM 518
Query: 388 MCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
+ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++HT T +G R L++
Sbjct: 519 LSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKK 578
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
WVT PL I+ARLDAVSE+ S S + +
Sbjct: 579 WVTQPLLKLREINARLDAVSEVLHSESS--------------------------VFGQIE 612
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH- 565
L + PDI+RG+ I+H+ + EF +++ LY H+ E++ + + H
Sbjct: 613 NHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--------HLKSEFQAIIPAVNSHI 663
Query: 566 -SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
S LL+ +IL P ++ L +N++AA GD L F + + + +Q
Sbjct: 664 QSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQ 720
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRY 682
+E+ + RK L + ++++VSG +IE+ A +P +W KV STK R+
Sbjct: 721 GVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRF 780
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
HSP ++ L E+L + C A W FL++F +Y AV LA +DC+ +LA +
Sbjct: 781 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKV 840
Query: 743 SRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGP 800
++ ++ RP E +I I +GRHPV+D +L D +VPN+T+L + E IITGP
Sbjct: 841 AKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGP 897
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +GRSTF+EEL
Sbjct: 898 NMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEELT 957
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
+ + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LFVTHYP + ++
Sbjct: 958 DTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCEL 1017
Query: 921 KTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQ 977
+ ++ VG YH+ +L S + P ++ D VT+LY++ G++ S+G VA+LA
Sbjct: 1018 EKNYSHQVGNYHMGFLVSEDESKLDPGTAEQVPDFVTFLYQITRGIAARSYGLNVAKLAD 1077
Query: 978 LPPSCISRATVIAAKLEAEVSSR 1000
+P + +A + +LE ++++
Sbjct: 1078 VPGEILKKAAHKSKELEGLINTK 1100
>gi|30089006|gb|AAP13535.1| mutS homolog 3 (E. coli) [Homo sapiens]
Length = 1140
Score = 630 bits (1626), Expect = e-177, Method: Compositional matrix adjust.
Identities = 370/983 (37%), Positives = 555/983 (56%), Gaps = 89/983 (9%)
Query: 44 VSFSPAKRKVV---SSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELK 100
VS +KR++ ++LF S L + S+ YTPLE Q +E+K
Sbjct: 184 VSSEDSKRQINQKDTTLFDLSQFGSSNTSHENLQKTASKSANKRSKSIYTPLELQYIEMK 243
Query: 101 TKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNA 160
++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT RL VHVRRLV
Sbjct: 244 QQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAK 303
Query: 161 GFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG----------GED 210
G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV E
Sbjct: 304 GYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPLIKLDDAVNVDEI 362
Query: 211 GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV+ F D RS
Sbjct: 363 MTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVVFDSFQDSASRSE 416
Query: 271 LEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE + SL P ELLL LS+QTE ++ + + +RVE F A V
Sbjct: 417 LETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYFEYSHAFQAVT 476
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
Y +DT+ Q I GI+N+ + +LA I++LK+F LE++
Sbjct: 477 EFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAIIKYLKEFNLEKM 521
Query: 388 MCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
+ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++HT T +G R L++
Sbjct: 522 LSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKK 581
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
WVT PL I+ARLDAVSE+ S S + +
Sbjct: 582 WVTQPLLKLREINARLDAVSEVLHSESS--------------------------VFGQIE 615
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH- 565
L + PDI+RG+ I+H+ + EF +++ + H+ E++ + + H
Sbjct: 616 NHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLY---------HLKSEFQAIIPAVNSHI 666
Query: 566 -SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
S LL+ +IL P ++ L +N++AA GD L F + + + +Q
Sbjct: 667 QSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQ 723
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRY 682
+E+ + RK L + ++++VSG +IE+ A +P +W KV STK R+
Sbjct: 724 GVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRF 783
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
HSP ++ L E+L + C A W FL++F +Y AV LA +DC+ +LA +
Sbjct: 784 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKV 843
Query: 743 SRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGP 800
++ ++ RP E +I I +GRHPV+D +L D +VPN+T+L + E IITGP
Sbjct: 844 AKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGP 900
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +GRSTF+EEL
Sbjct: 901 NMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEELT 960
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
+ + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LFVTHYP + ++
Sbjct: 961 DTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCEL 1020
Query: 921 KTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQ 977
+ ++ VG YH+ +L S + P ++ D VT+LY++ G++ S+G VA+LA
Sbjct: 1021 EKNYSHQVGNYHMGFLVSEDESKLDPGTAEQVPDFVTFLYQITRGIAARSYGLNVAKLAD 1080
Query: 978 LPPSCISRATVIAAKLEAEVSSR 1000
+P + +A + +LE ++++
Sbjct: 1081 VPGEILKKAAHKSKELEGLINTK 1103
>gi|158260735|dbj|BAF82545.1| unnamed protein product [Homo sapiens]
Length = 1128
Score = 630 bits (1625), Expect = e-177, Method: Compositional matrix adjust.
Identities = 372/983 (37%), Positives = 556/983 (56%), Gaps = 89/983 (9%)
Query: 44 VSFSPAKRKVV---SSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELK 100
VS +KR++ ++LF S L + S+ YTPLE Q +E+K
Sbjct: 172 VSSEDSKRQINQKDTTLFDLSQFGSSNTSHENLQKTASKSANKRSKSIYTPLELQYIEMK 231
Query: 101 TKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNA 160
++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT RL VHVRRLV
Sbjct: 232 QQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAK 291
Query: 161 GFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG----------GED 210
G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV E
Sbjct: 292 GYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPLIKLDDAVNVDEI 350
Query: 211 GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV+ F D RS
Sbjct: 351 MTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVVFDSFQDSASRSE 404
Query: 271 LEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE + SL P ELLL LS+QTE ++ + + +RVE F A V
Sbjct: 405 LETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYFEYSHAFQAVT 464
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
Y +DT+ Q I GI+N+ + +LA I++LK+F LE++
Sbjct: 465 EFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAIIKYLKEFNLEKM 509
Query: 388 MCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
+ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++HT T +G R L++
Sbjct: 510 LSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKK 569
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
WVT PL I+ARLDAVSE+ S S + +
Sbjct: 570 WVTQPLLKLREINARLDAVSEVLHSESS--------------------------VFGQIE 603
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH- 565
L + PDI+RG+ I+H+ + EF +++ LY H+ E++ + + H
Sbjct: 604 NHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--------HLKSEFQAIIPAVNSHI 654
Query: 566 -SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
S LL+ +IL P ++ L +N++AA GD L F + + + +Q
Sbjct: 655 QSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQ 711
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRY 682
+E+ + RK L + ++++VSG +IE+ A +P +W KV STK R+
Sbjct: 712 GVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRF 771
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
HSP ++ L E+L + C A W FL++F +Y AV LA +DC+ +LA +
Sbjct: 772 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKV 831
Query: 743 SRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGP 800
++ ++ RP E +I I +GRHPV+D +L D +VPN+T+L + E IITGP
Sbjct: 832 AKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGP 888
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +GRSTF+EEL
Sbjct: 889 NMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEELT 948
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
+ + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LFVTHYP + ++
Sbjct: 949 DTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCEL 1008
Query: 921 KTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQ 977
+ ++ VG YH+ +L S + P ++ D VT+LY++ G++ S+G VA+LA
Sbjct: 1009 EKNYSHQVGNYHMGFLVSEDESKLDPGTAEQVPDFVTFLYQITRGIAARSYGLNVAKLAD 1068
Query: 978 LPPSCISRATVIAAKLEAEVSSR 1000
+P + +A + +LE ++++
Sbjct: 1069 VPGEILKKAAHKSKELEGLINTK 1091
>gi|120660058|gb|AAI30437.1| MutS homolog 3 (E. coli) [Homo sapiens]
Length = 1137
Score = 630 bits (1625), Expect = e-177, Method: Compositional matrix adjust.
Identities = 372/983 (37%), Positives = 556/983 (56%), Gaps = 89/983 (9%)
Query: 44 VSFSPAKRKVV---SSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELK 100
VS +KR++ ++LF S L + S+ YTPLE Q +E+K
Sbjct: 181 VSSEDSKRQINQKDTTLFDLSQFGSSNTSHENLQKTASKSANKRSKSIYTPLELQYIEMK 240
Query: 101 TKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNA 160
++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT RL VHVRRLV
Sbjct: 241 QQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAK 300
Query: 161 GFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG----------GED 210
G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV E
Sbjct: 301 GYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPLIKLDDAVNVDEI 359
Query: 211 GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV+ F D RS
Sbjct: 360 MTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVVFDSFQDSASRSE 413
Query: 271 LEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE + SL P ELLL LS+QTE ++ + + +RVE F A V
Sbjct: 414 LETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYFEYSHAFQAVT 473
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
Y +DT+ Q I GI+N+ + +LA I++LK+F LE++
Sbjct: 474 EFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAIIKYLKEFNLEKM 518
Query: 388 MCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
+ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++HT T +G R L++
Sbjct: 519 LSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKK 578
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
WVT PL I+ARLDAVSE+ S S + +
Sbjct: 579 WVTQPLLKLREINARLDAVSEVLHSESS--------------------------VFGQIE 612
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH- 565
L + PDI+RG+ I+H+ + EF +++ LY H+ E++ + + H
Sbjct: 613 NHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--------HLKSEFQAIIPAVNSHI 663
Query: 566 -SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
S LL+ +IL P ++ L +N++AA GD L F + + + +Q
Sbjct: 664 QSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQ 720
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRY 682
+E+ + RK L + ++++VSG +IE+ A +P +W KV STK R+
Sbjct: 721 GVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRF 780
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
HSP ++ L E+L + C A W FL++F +Y AV LA +DC+ +LA +
Sbjct: 781 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKV 840
Query: 743 SRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGP 800
++ ++ RP E +I I +GRHPV+D +L D +VPN+T+L + E IITGP
Sbjct: 841 AKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGP 897
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +GRSTF+EEL
Sbjct: 898 NMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEELT 957
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
+ + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LFVTHYP + ++
Sbjct: 958 DTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCEL 1017
Query: 921 KTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQ 977
+ ++ VG YH+ +L S + P ++ D VT+LY++ G++ S+G VA+LA
Sbjct: 1018 EKNYSHQVGNYHMGFLVSEDESKLDPGTAEQVPDFVTFLYQITRGIAARSYGLNVAKLAD 1077
Query: 978 LPPSCISRATVIAAKLEAEVSSR 1000
+P + +A + +LE ++++
Sbjct: 1078 VPGEILKKAAHKSKELEGLINTK 1100
>gi|1490521|gb|AAB06045.1| hMSH3 [Homo sapiens]
gi|119616268|gb|EAW95862.1| mutS homolog 3 (E. coli), isoform CRA_b [Homo sapiens]
Length = 1128
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 372/983 (37%), Positives = 556/983 (56%), Gaps = 89/983 (9%)
Query: 44 VSFSPAKRKVV---SSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELK 100
VS +KR++ ++LF S L + S+ YTPLE Q +E+K
Sbjct: 172 VSSEDSKRQINQKDTTLFDLSQFGSSNTSHENLQKTASKSANKRSKSIYTPLELQYIEMK 231
Query: 101 TKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNA 160
++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT RL VHVRRLV
Sbjct: 232 QQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAK 291
Query: 161 GFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG----------GED 210
G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV E
Sbjct: 292 GYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPLIKLDDAVNVDEI 350
Query: 211 GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV+ F D RS
Sbjct: 351 MTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVVFDSFQDSASRSE 404
Query: 271 LEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE + SL P ELLL LS+QTE ++ + + +RVE F A V
Sbjct: 405 LETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYFEYSHAFQAVT 464
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
Y +DT+ Q I GI+N+ + +LA I++LK+F LE++
Sbjct: 465 EFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAIIKYLKEFNLEKM 509
Query: 388 MCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
+ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++HT T +G R L++
Sbjct: 510 LSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKK 569
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
WVT PL I+ARLDAVSE+ S S + +
Sbjct: 570 WVTQPLLKLREINARLDAVSEVLHSESS--------------------------VFGQIE 603
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH- 565
L + PDI+RG+ I+H+ + EF +++ LY H+ E++ + + H
Sbjct: 604 NHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--------HLKSEFQAIIPAVNSHI 654
Query: 566 -SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
S LL+ +IL P ++ L +N++AA GD L F + + + +Q
Sbjct: 655 QSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQ 711
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRY 682
+E+ + RK L + ++++VSG +IE+ A +P +W KV STK R+
Sbjct: 712 GVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRF 771
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
HSP ++ L E+L + C A W FL++F +Y AV LA +DC+ +LA +
Sbjct: 772 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKV 831
Query: 743 SRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGP 800
++ ++ RP E +I I +GRHPV+D +L D +VPN+T+L + E IITGP
Sbjct: 832 AKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGP 888
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +GRSTF+EEL
Sbjct: 889 NMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEELT 948
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
+ + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LFVTHYP + ++
Sbjct: 949 DTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCEL 1008
Query: 921 KTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQ 977
+ ++ VG YH+ +L S + P ++ D VT+LY++ G++ S+G VA+LA
Sbjct: 1009 EKNYSHQVGNYHMGFLVSEDESKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLAD 1068
Query: 978 LPPSCISRATVIAAKLEAEVSSR 1000
+P + +A + +LE ++++
Sbjct: 1069 VPGEILKKAAHKSKELEGLINTK 1091
>gi|345798537|ref|XP_536307.3| PREDICTED: DNA mismatch repair protein Msh3 [Canis lupus familiaris]
Length = 1066
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 367/949 (38%), Positives = 538/949 (56%), Gaps = 88/949 (9%)
Query: 75 PIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA 134
P P PS++ T + YTPLE Q +ELK + D +L +E GYK+RFFGEDAE+AA+ L IY
Sbjct: 147 PDPKPSNKRTKSI-YTPLELQYIELKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYC 205
Query: 135 HLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY 194
HLDHNFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALY
Sbjct: 206 HLDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAVGDNKSSLFSRKLTALY 265
Query: 195 TKATLEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR 244
TK+TL EDV E +++L+C+ +++ NV + G ++
Sbjct: 266 TKSTL-IGEDVNPLVKLDDAINVDEVMTDTSTSFLLCICENEENVKDKKKG------NIF 318
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA 304
+G+V V+ TG+VV+ F D RS LE +L L P E+LL LS+QTE L+ A A
Sbjct: 319 IGIVGVQPVTGEVVFDSFQDSASRSELETRILCLQPVEMLLPSRLSEQTE-TLVHRATAA 377
Query: 305 S----NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
S +RVE F A V Y D ++ + G
Sbjct: 378 SVRDDRIRVERMDNVYFEYSHAFQAVTEFYAKDAVDIQASQ---------------SFSG 422
Query: 361 IMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNN 419
I+N+ + +LA IR+LK+F LE+++ +F+ SG ME MT++ TL+ LE+L+N
Sbjct: 423 IINLEKPVICSLAAVIRYLKEFNLEKVLSKPKNFKQFSGEMEFMTINGTTLRNLEILQNQ 482
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
++ G+LL +++HT T +G R L++WV PL I+ARLDAVSE+ S S
Sbjct: 483 TDMKTKGSLLWVLDHTKTSFGRRKLKKWVVQPLLKLREINARLDAVSEVLHSESS----- 537
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI 539
+ + L + PDI+RG+ I+H+ + EF +++
Sbjct: 538 ---------------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT- 575
Query: 540 LYAGKQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAA 597
LY H+ E++ + + H S LL+ IL P ++ L +N++AA
Sbjct: 576 LY--------HLKSEFQALIPAVNSHVQSDLLRTFILEI--PELLSPVEHYLRILNEQAA 625
Query: 598 DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL 657
GD L F + + + +Q +++ + RK L +L++++VSG +
Sbjct: 626 KIGDKTELFK-DLTDFPLIKKRKDEIQEVTDKIQMHLQEIRKILKNPSLQYVTVSGQEFM 684
Query: 658 IELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
IE+ A +P +W KV STK R+HSP ++ L E+L + C A W FL+
Sbjct: 685 IEIKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEN 744
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
F +Y AV LA +DC+ +LA +++ ++ RP E +I I +GRHPV+D +
Sbjct: 745 FSAHYHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPSL---QEERKIVIKNGRHPVIDVL 801
Query: 776 L--LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
L D +VPN TNL + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A +
Sbjct: 802 LGEQDQYVPNSTNLSGDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIG 861
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
++DGI+TRMGA+D+I +G+STF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIA
Sbjct: 862 IVDGIFTRMGAADNIYKGQSTFMEELMDTAEIIRQATSQSLVILDELGRGTSTHDGIAIA 921
Query: 894 YATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQ 951
YATL++ + K + LFVTHYP + +++ + VG YH+ +L + P +
Sbjct: 922 YATLEHFIRDVKSLTLFVTHYPPVCELEKSYLQEVGNYHMGFLVNEDENKEDPGEEPVPD 981
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
VT+LY++ G++ S+G VA+LA +P + +A + +LE V+ +
Sbjct: 982 FVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAASKSKELEGLVNMK 1030
>gi|426384231|ref|XP_004058675.1| PREDICTED: DNA mismatch repair protein Msh3 [Gorilla gorilla gorilla]
Length = 1128
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 365/948 (38%), Positives = 546/948 (57%), Gaps = 90/948 (9%)
Query: 80 SSQTTHNKK----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH 135
+S + NK+ YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY H
Sbjct: 207 TSSKSANKRSKSIYTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCH 266
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LDHNFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+ALYT
Sbjct: 267 LDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYT 326
Query: 196 KATLEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRL 245
K+TL EDV E ++YL+C+ ++ N+ + G ++ +
Sbjct: 327 KSTL-IGEDVNPLIKLDDAVNVDEIMTDTSTSYLLCISENKENIRDKKKG------NIFI 379
Query: 246 GVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAG 302
G+V V+ +TG+VV+ F D RS LE + SL P ELLL LS+QTE ++ + +
Sbjct: 380 GIVGVQPATGEVVFDSFQDSASRSELETRMSSLQPVELLLPSALSEQTETLIHRATSVSV 439
Query: 303 PASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
+RVE F A V Y +DT+ Q I GI+
Sbjct: 440 QDDRIRVERMDNIYFEYSHAFQAVTEFY---AKDTVDIKGSQ------------IISGIV 484
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSN 421
N+ + +LA I++LK+F LE+++ +F+ LS ME MT++ TL+ LE+L+N ++
Sbjct: 485 NLEKPVICSLAAIIKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTD 544
Query: 422 GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESV 481
G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 545 MKTKGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS------- 597
Query: 482 GQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY 541
+ + L + PDI+RG+ I+H+ + EF +++ LY
Sbjct: 598 -------------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY 637
Query: 542 AGKQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
H+ E++ + + H S LL+ +IL P ++ L +N++AA
Sbjct: 638 --------HLKSEFQAIIPAVNSHIQSDLLRTVILEI--PELLSPVEHYLKILNEQAAKV 687
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIE 659
GD L F + + + +Q +E+ + RK L + ++++VSG +IE
Sbjct: 688 GDKTELFK-DLSDFPLIKKRKDEIQGVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIE 746
Query: 660 LP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+ A +P +W KV STK R+HSP ++ L E+L + C A W FL++F
Sbjct: 747 IKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFS 806
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL- 776
+Y AV LA +DC+ +LA +++ ++ RP E +I I +GRHPV+D +L
Sbjct: 807 EHYHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLG 863
Query: 777 -LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
D +VPN+T+L + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++
Sbjct: 864 EQDQYVPNNTDLSEDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIV 923
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
DGI+TRMGA+D+I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYA
Sbjct: 924 DGIFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYA 983
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQD- 952
TL+Y + K + LFVTHYP + +++ ++ VG YH+ +L S + P ++ D
Sbjct: 984 TLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESKLDPGAAEQVPDF 1043
Query: 953 VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
VT+LY++ G++ S+G VA+LA +P + +A + +LE ++++
Sbjct: 1044 VTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLINTK 1091
>gi|364506056|pdb|3THW|B Chain B, Human Mutsbeta Complexed With An Idl Of 4 Bases (Loop4) And
Adp
gi|364506059|pdb|3THX|B Chain B, Human Mutsbeta Complexed With An Idl Of 3 Bases (Loop3) And
Adp
gi|364506063|pdb|3THY|B Chain B, Human Mutsbeta Complexed With An Idl Of 2 Bases (Loop2) And
Adp
gi|364506067|pdb|3THZ|B Chain B, Human Mutsbeta Complexed With An Idl Of 6 Bases (Loop6) And
Adp
Length = 918
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 364/946 (38%), Positives = 543/946 (57%), Gaps = 87/946 (9%)
Query: 79 PSSQTTHNKK-YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLD 137
P S +K YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLD
Sbjct: 2 PKSANKRSKSIYTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLD 61
Query: 138 HNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKA 197
HNFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+
Sbjct: 62 HNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKS 121
Query: 198 TLEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGV 247
TL EDV E ++YL+C+ ++ NV + G ++ +G+
Sbjct: 122 TL-IGEDVNPLIKLDDAVNVDEIMTDTSTSYLLCISENKENVRDKKKG------NIFIGI 174
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPA 304
V V+ +TG+VV+ F D RS LE + SL P ELLL LS+QTE ++ + +
Sbjct: 175 VGVQPATGEVVFDSFQDSASRSELETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQD 234
Query: 305 SNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
+RVE F A V Y +DT+ Q I GI+N+
Sbjct: 235 DRIRVERMDNIYFEYSHAFQAVTEFY---AKDTVDIKGSQ------------IISGIVNL 279
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGS 423
+ +LA I++LK+F LE+++ +F+ LS ME MT++ TL+ LE+L+N ++
Sbjct: 280 EKPVICSLAAIIKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMK 339
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 340 TKGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS--------- 390
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
+ + L + PDI+RG+ I+H+ + EF +++ +
Sbjct: 391 -----------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLY--- 430
Query: 544 KQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
H+ E++ + + H S LL+ +IL P ++ L +N++AA GD
Sbjct: 431 ------HLKSEFQAIIPAVNSHIQSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGD 482
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
L F + + + +Q +E+ + RK L + ++++VSG +IE+
Sbjct: 483 KTELFK-DLSDFPLIKKRKDEIQGVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIK 541
Query: 662 --ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
A +P +W KV STK R+HSP ++ L E+L + C A W FL++F +
Sbjct: 542 NSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEH 601
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--L 777
Y AV LA +DC+ +LA +++ ++ RP E +I I +GRHPV+D +L
Sbjct: 602 YHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQ 658
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D +VPN+T+L + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DG
Sbjct: 659 DQYVPNNTDLSEDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDG 718
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TRMGA+D+I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL
Sbjct: 719 IFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATL 778
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQD-VT 954
+Y + K + LFVTHYP + +++ ++ VG YH+ +L S + P ++ D VT
Sbjct: 779 EYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESKLDPGAAEQVPDFVT 838
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+LY++ G++ S+G VA+LA +P + +A + +LE ++++
Sbjct: 839 FLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLINTK 884
>gi|354491562|ref|XP_003507924.1| PREDICTED: DNA mismatch repair protein Msh3 [Cricetulus griseus]
Length = 1075
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 366/935 (39%), Positives = 531/935 (56%), Gaps = 86/935 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +++K K+ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 173 YTPLELQYIDVKQKHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 232
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQ ETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 233 RLFVHVRRLVAKGYKVGVVKQMETAALKAIGDNKSSVFSRKLTALYTKSTL-IGEDVNPL 291
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E ++YL+C+ ++ N + G ++ +G+V V+ +TG+VV
Sbjct: 292 IRLDDSVNIDEVMTETSTSYLLCIYEEKENSKDKKKG------NISIGIVGVQPATGEVV 345
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
Y F D R LE + SL P ELLL LS+ TE ML+ A S +RVE
Sbjct: 346 YDCFQDSASRLELETRISSLQPVELLLPSHLSELTE-MLIHRATAVSIRDDRIRVERMDN 404
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y + + + QN GI+N+ + +LA
Sbjct: 405 TYFEYSHAFQAVTEFY---AREVVDSKGSQNFS------------GIINLEKPVICSLAA 449
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
IR+LK+F LE+I+ +F+ LS ME M ++ TL+ LE+L+N ++ G+LL +++
Sbjct: 450 IIRYLKEFNLEKILSKPENFKQLSSGMEFMRINGTTLRNLEILQNQTDMKTKGSLLWVLD 509
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L++WVT PL I+ARLDA+S++ S S
Sbjct: 510 HTKTSFGRRKLKKWVTQPLLKLRDINARLDAISDVLHSESS------------------- 550
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PDI+RG+ I+H+ + EF +++++ + +LQ L
Sbjct: 551 -------VFEQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKSLSHLKSELQALI--- 600
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
S + S LL+ LIL +PA++ L +N++AA GD L F
Sbjct: 601 ----PAVSSLVQSDLLQTLIL--ETPALLSPVEHYLKILNEQAAKVGDKTELFK-DLTDF 653
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWA 671
+ + + +Q + + + RK L +L++++VSG +IE+ A +P +W
Sbjct: 654 PLIKKRKDEIQEVTQSIQMHLQELRKMLNRPSLQYVTVSGQEFMIEIKNSAVSCIPADWV 713
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
KV STK R+H P ++ +L E+L + C A W FL+ FG +Y AV LA
Sbjct: 714 KVGSTKAVSRFHPPFIVENYRRLNQLREQLVLDCSAEWLDFLENFGEHYHTLCKAVNHLA 773
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHA 789
+DC+ +LA +++ N+ RP E +I I +GRHP++D +L D FVPN T+L
Sbjct: 774 TVDCIFSLAKVAKQGNYCRPTL---QEEKKIVIKNGRHPMIDVLLGEQDQFVPNSTSLSQ 830
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++D I+TRMGA+D+I
Sbjct: 831 DSERVMIITGPNMGGKSSYIKQVALIAIMAQIGSYVPAEEATIGIVDAIFTRMGAADNIY 890
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF+EEL + + I+R T QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + L
Sbjct: 891 KGRSTFMEELTDTAEIIRKATPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTL 950
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
FVTHYP + +++ + VG YH+ +L S + G M+ D VT+LY++ G++
Sbjct: 951 FVTHYPPVCELEKCYPEQVGNYHMGFLVDEDESKQESGNMEQVPD-SVTFLYQITRGIAS 1009
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA +P + +A + +LE V+ R
Sbjct: 1010 RSYGLNVAKLADVPGEILKKAAHKSKELEGLVNLR 1044
>gi|181842|gb|AAB47281.1| MSH3 [Homo sapiens]
gi|49615092|dbj|BAD27111.1| hMSH3 protein [Homo sapiens]
Length = 1137
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 370/983 (37%), Positives = 554/983 (56%), Gaps = 89/983 (9%)
Query: 44 VSFSPAKRKVV---SSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELK 100
VS +KR++ ++LF S L + S+ YTPLE Q +E+K
Sbjct: 181 VSSEDSKRQINQKDTTLFDLSQFGSSNTSHENLQKTASKSANKRSKSIYTPLELQYIEMK 240
Query: 101 TKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNA 160
++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT RL VHVRRLV
Sbjct: 241 QQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAK 300
Query: 161 GFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG----------GED 210
G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV E
Sbjct: 301 GYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPLIKLDDAVNVDEI 359
Query: 211 GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV+ F D RS
Sbjct: 360 MTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVVFDSFQDSASRSE 413
Query: 271 LEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE + SL P ELLL LS+QTE ++ + + +RVE F A V
Sbjct: 414 LETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYFEYSHAFQAVT 473
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
Y +DT+ Q I GI+N+ + +LA I++LK+F LE++
Sbjct: 474 EFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAIIKYLKEFNLEKM 518
Query: 388 MCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
+ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++HT T +G R L++
Sbjct: 519 LSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKK 578
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
WVT PL I+ARLDAVSE+ S S + +
Sbjct: 579 WVTQPLLKLREINARLDAVSEVLHSESS--------------------------VFGQIE 612
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH- 565
L + PDI RG+ I+H+ + EF +++ + H+ E++ + + H
Sbjct: 613 NHLRKLPDIGRGLCSIYHKKCSTQEFFLIVKTLY---------HLKSEFQAIIPAVNSHI 663
Query: 566 -SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
S LL+ +IL P ++ L +N++AA GD L F + + + +Q
Sbjct: 664 QSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQ 720
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRY 682
+E+ + RK L + ++++VSG +IE+ A +P +W KV STK R+
Sbjct: 721 GVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRF 780
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
HSP ++ L E+L + C A W FL++F +Y AV LA +DC+ +LA +
Sbjct: 781 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKV 840
Query: 743 SRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGP 800
++ ++ RP E +I I +GRHPV+D +L D +VPN+T+L + E IITGP
Sbjct: 841 AKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGP 897
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +GRSTF+EEL
Sbjct: 898 NMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEELT 957
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
+ + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LFVTHYP + ++
Sbjct: 958 DTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCEL 1017
Query: 921 KTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQ 977
+ ++ VG YH+ +L S + P ++ D VT+LY++ G++ S+G VA+LA
Sbjct: 1018 EKNYSHQVGNYHMGFLVSEDESKLDPGTAEQVPDFVTFLYQITRGIAARSYGLNVAKLAD 1077
Query: 978 LPPSCISRATVIAAKLEAEVSSR 1000
+P + +A + +LE ++++
Sbjct: 1078 VPGEILKKAAHKSKELEGLINTK 1100
>gi|284813531|ref|NP_002430.3| DNA mismatch repair protein Msh3 [Homo sapiens]
gi|317373576|sp|P20585.4|MSH3_HUMAN RecName: Full=DNA mismatch repair protein Msh3; Short=hMSH3; AltName:
Full=Divergent upstream protein; Short=DUP; AltName:
Full=Mismatch repair protein 1; Short=MRP1
Length = 1137
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 371/983 (37%), Positives = 556/983 (56%), Gaps = 89/983 (9%)
Query: 44 VSFSPAKRKVV---SSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELK 100
VS +KR++ ++LF S L + S+ YTPLE Q +E+K
Sbjct: 181 VSSEDSKRQINQKDTTLFDLSQFGSSNTSHENLQKTASKSANKRSKSIYTPLELQYIEMK 240
Query: 101 TKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNA 160
++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT RL VHVRRLV
Sbjct: 241 QQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAK 300
Query: 161 GFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG----------GED 210
G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV E
Sbjct: 301 GYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPLIKLDDAVNVDEI 359
Query: 211 GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV+ F D RS
Sbjct: 360 MTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVVFDSFQDSASRSE 413
Query: 271 LEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE + SL P ELLL LS+QTE ++ + + +RVE F A V
Sbjct: 414 LETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYFEYSHAFQAVT 473
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
Y +DT+ Q I GI+N+ + +LA I++LK+F LE++
Sbjct: 474 EFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAIIKYLKEFNLEKM 518
Query: 388 MCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
+ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++HT T +G R L++
Sbjct: 519 LSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKK 578
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
WVT PL I+ARLDAVSE+ S S + +
Sbjct: 579 WVTQPLLKLREINARLDAVSEVLHSESS--------------------------VFGQIE 612
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH- 565
L + PDI+RG+ I+H+ + EF +++ LY H+ E++ + + H
Sbjct: 613 NHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--------HLKSEFQAIIPAVNSHI 663
Query: 566 -SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
S LL+ +IL P ++ L +N++AA GD L F + + + +Q
Sbjct: 664 QSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQ 720
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRY 682
+E+ + RK L + ++++VSG +IE+ A +P +W KV STK R+
Sbjct: 721 GVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRF 780
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
HSP ++ L E+L + C A W FL++F +Y AV LA +DC+ +LA +
Sbjct: 781 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKV 840
Query: 743 SRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGP 800
++ ++ RP E +I I +GRHPV+D +L D +VPN+T+L + E IITGP
Sbjct: 841 AKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGP 897
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +G+STF+EEL
Sbjct: 898 NMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEELT 957
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
+ + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LFVTHYP + ++
Sbjct: 958 DTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCEL 1017
Query: 921 KTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQ 977
+ ++ VG YH+ +L S + P ++ D VT+LY++ G++ S+G VA+LA
Sbjct: 1018 EKNYSHQVGNYHMGFLVSEDESKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLAD 1077
Query: 978 LPPSCISRATVIAAKLEAEVSSR 1000
+P + +A + +LE ++++
Sbjct: 1078 VPGEILKKAAHKSKELEGLINTK 1100
>gi|332224846|ref|XP_003261579.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3
[Nomascus leucogenys]
Length = 1125
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 360/936 (38%), Positives = 539/936 (57%), Gaps = 88/936 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 217 YTPLELQYIEMKQQHRDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 276
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+A+YTK+TL EDV
Sbjct: 277 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTAIYTKSTL-IGEDVNPL 335
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E ++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV
Sbjct: 336 IKLDDAVNVDEIMTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVV 389
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRD 315
+ F D RS LE + SL P ELLL LS+QTE ++ + + +RVE
Sbjct: 390 FDSFQDSASRSELETRMSSLQPVELLLPSALSEQTEALVHRATSVSVQDDRIRVERMDNI 449
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
F A V Y +DT+ Q I GI+N+ + +LA
Sbjct: 450 YFEYSHAFQAVTEFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAI 494
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
I++LK+F LE+++ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++H
Sbjct: 495 IKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDH 554
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 555 TKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS-------------------- 594
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+ + L + PDI+RG+ I+H+ + EF +++ LY H+ E
Sbjct: 595 ------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--------HLKSE 639
Query: 555 YREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
++ + + H S LL+ +IL P ++ L +N++AA GD L
Sbjct: 640 FQAIIPAVNSHIQSDLLRTIILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSD 696
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNW 670
F + + + +Q +E+ + R+ L + ++++VSG +IE+ A +P +W
Sbjct: 697 FPSIKKRKDEIQGVIDEIRMHLQEIRRILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDW 756
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
KV STK R+HSP ++ L E+L + C A W FL++F +Y AV L
Sbjct: 757 VKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHL 816
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLH 788
A +DC+ +LA +++ ++ RP E +I I +GRHPV+D +L D +VPN T+L
Sbjct: 817 ATVDCIFSLAKVAKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNSTDLS 873
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I
Sbjct: 874 EDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNI 933
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
+GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K +
Sbjct: 934 YKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLT 993
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD----VTYLYKVVPGVS 964
LFVTHYP + +++ ++ VG YH+ +L S +D +++ VT+LY++ G++
Sbjct: 994 LFVTHYPPVCELEKNYSHQVGNYHMGFLVSED-ESKLDPGAEEQVPDFVTFLYQITRGIA 1052
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA +P + +A + +LE ++++
Sbjct: 1053 ARSYGLNVAKLADVPGEILKKAAHKSKELEGLINTK 1088
>gi|390459821|ref|XP_002744847.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3
[Callithrix jacchus]
Length = 1126
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 365/933 (39%), Positives = 539/933 (57%), Gaps = 81/933 (8%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 217 YTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 276
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG-- 206
RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV
Sbjct: 277 RLFVHVRRLVAKGYKVGVVKQTETAALKAVGDNRSSLFSRKLTALYTKSTL-IGEDVNPL 335
Query: 207 -GGEDGCGGE-------SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+D + ++YL+C+ +++ NV + G +V +G+V V+ +TG+VV
Sbjct: 336 IKLDDAVNVDAIMTDTSTSYLLCISENNENVRDKKKG------NVFIGIVGVQPATGEVV 389
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D RS LE + SL P ELLL LSKQTE ML+ A S +RVE
Sbjct: 390 FDSFQDSASRSELETRMSSLQPVELLLPLALSKQTE-MLIHRATSVSVRDDRIRVERMDD 448
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y +DT V +G+ I GI+N+ + +LA
Sbjct: 449 TYFEYSHAFQAVTEFY---AKDT----------VDFKGS--KIISGIINLEKPVICSLAA 493
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
I++LK+F LE+++ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++
Sbjct: 494 IIKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLD 553
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 554 HTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS------------------- 594
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PD++RG+ I+H+ + E + A + L L D
Sbjct: 595 -------VFGQIENHLHKLPDVERGLCSIYHKKVSVIEIYXKL-----AVQNLIHLKSDQ 642
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ + + +L+ +IL P ++G L +N++AA GD L F
Sbjct: 643 YAIVPIIKSHVLAPMLRTIILEI--PELLGPVEHYLKILNEQAAKVGDKTELFK-DLSDF 699
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWA 671
+ + + +Q +++ + RK L + ++++VSG +IE+ A +P +W
Sbjct: 700 PLIKKRKDEIQGVSDKIRIHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWV 759
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
KV STK R+HSP ++ L E+L + C A W FL++F +Y AV LA
Sbjct: 760 KVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLA 819
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHA 789
+DC+ +LA +++ + RP E +I I +GRHPV+D +L D +VPN T+L
Sbjct: 820 TIDCIFSLAKVAKQGEYCRPTV---QEERKILIKNGRHPVIDVLLGEQDQYVPNSTDLSE 876
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I
Sbjct: 877 DSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIY 936
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + L
Sbjct: 937 KGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTL 996
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
FVTHYP + +++ ++ VG YH+ +L S + P + + VT+LY++ G++E S
Sbjct: 997 FVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESRLPPGEEQVPDFVTFLYQITRGIAERS 1056
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+G VA+LA +P + +A + +LE ++++
Sbjct: 1057 YGLNVAKLADVPGEILKKAAHKSKELEGLINTK 1089
>gi|291394958|ref|XP_002713953.1| PREDICTED: mutS homolog 3 [Oryctolagus cuniculus]
Length = 1057
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 363/940 (38%), Positives = 534/940 (56%), Gaps = 96/940 (10%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNF+TASIPT
Sbjct: 155 YTPLELQFLEVKRQHQDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFLTASIPTH 214
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 215 RLFVHVRRLVAKGYKVGVVKQTETAALKAVGDNKSSLFSRKLTALYTKSTL-IGEDVNPL 273
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E SNYL+C+ ++ + G + +GVV V+ +TG+VV
Sbjct: 274 IKLDGAMNVDEIMTDASSNYLLCICENKEKAKDKKKG------SIFIGVVGVQPATGEVV 327
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRD 315
Y F D RS LE + +L P ELLL LS+QTE+++ A + +RVE
Sbjct: 328 YDSFQDSASRSELETRISALQPVELLLPSHLSEQTERLIHRATAVSVRDDRMRVERMEDV 387
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
F A V Y +D+ QG ++ GI+N+ V +LA
Sbjct: 388 HFEYSHAFQMVTEFYA----------KDET-----QGKCSQSLSGILNLEKPVVCSLAAV 432
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
IR+LK+F LE+++ +F+ LS +E MT++ TL+ LE+L+N ++ G+L +++H
Sbjct: 433 IRYLKEFNLEKMLSKPENFKQLSSEVEFMTINGTTLRNLEILQNQTDMKTKGSLFWVLDH 492
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 493 TKTSFGRRKLKKWVTQPLLKLRDINARLDAVSEVLHSESS-------------------- 532
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+ + L + PDI+RG+ I+H+ + EF +++ + + + Q L
Sbjct: 533 ------VFGQIENHLNKLPDIERGLCSIYHKKCSTQEFFLIVKTLCHLKSEFQAL----- 581
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+ +HS LL+ L P ++ A + L +N++AA GD L F
Sbjct: 582 --VPAVNSQVHSDLLRTCALDI--PELLRPAERYLQVLNEQAAKIGDKTELFK-DLSDFP 636
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAK 672
+ + + +Q E++ + RK L + ++++VSG +IE+ + +P +W K
Sbjct: 637 LIKKRKNEIQEVTEKIQVHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSSLSCIPADWIK 696
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
V STK R+HSP ++ +L E+L + C A W FL+ F G++ AV LA
Sbjct: 697 VGSTKAVSRFHSPFIVENYRRLNQLREQLALDCGAEWLGFLETFSGHHDSLCKAVHHLAT 756
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAE 790
+DC+ +L +++ N+ RP E +I I +GRHPV+D +L D +VPN TNL +
Sbjct: 757 VDCIFSLTKVAKQGNYCRPAL---QEERKIIIKNGRHPVIDVLLGEQDQYVPNSTNLSGD 813
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
E IITGPNMGGKS YI+QVALI +MAQ+GS+VPA A L ++DGI+TRMGA+D+I +
Sbjct: 814 AERVMIITGPNMGGKSSYIKQVALIAVMAQIGSYVPAEEATLGIVDGIFTRMGAADNIYK 873
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
GRSTF+EEL + + I+R T QSLVI+DELGRGTSTHDG+AIAYATL+Y + + + LF
Sbjct: 874 GRSTFMEELTDTAEIIRQATPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVQSLTLF 933
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD----------VTYLYKVV 960
VTHYP + +++ ++ VG YH+ +L + + +S QD VT+LY++
Sbjct: 934 VTHYPPVCELEKHYSQQVGNYHMGFLVT-------EDESKQDPGGEEPVPDFVTFLYQIT 986
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA +P + +A + +LE V+++
Sbjct: 987 QGVAARSYGLNVAKLADVPGEVLRKAARKSQELEGLVNAK 1026
>gi|68299763|ref|NP_034959.2| DNA mismatch repair protein Msh3 [Mus musculus]
Length = 1095
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 367/945 (38%), Positives = 535/945 (56%), Gaps = 86/945 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +++K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 187 YTPLELQYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTL-IGEDVNPL 305
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E +NYL+C+ ++ N+ + G ++ +G+V V+ +TG+VV
Sbjct: 306 IRLDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKG------NLSVGIVGVQPATGEVV 359
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D R LE + SL P ELLL LS TE ML+ A S +RVE +
Sbjct: 360 FDCFQDSASRLELETRISSLQPVELLLPSDLSVPTE-MLIQRATNVSVRDDRIRVERMNN 418
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y D+ QG+ ++ G++N+ + ALA
Sbjct: 419 TYFEYSHAFQTVTEFYAREIVDS-------------QGSQ--SLSGVINLEKPVICALAA 463
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
IR+LK+F LE+++ SF+ LS ME M ++ TL+ LE+L+N ++ G+LL +++
Sbjct: 464 VIRYLKEFNLEKMLSKPESFKQLSSGMEFMRINGTTLRNLEILQNQTDMKTKGSLLWVLD 523
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L+ WVT PL I+ARLDAVS++ S S
Sbjct: 524 HTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESS------------------- 564
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PD++RG+ I+H+ + EF +++++ +LQ L
Sbjct: 565 -------VFEQIENLLRKLPDVERGLCSIYHKKCSTQEFFLIVKSLCQLKSELQALM--- 614
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ + S LL+ LI+ A P ++ L +N AA GD L F
Sbjct: 615 ----PAVNSHVQSDLLRALIVEA--PELLSPVEHYLKVLNGPAAKVGDKTELFK-DLSDF 667
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWA 671
+ + + +Q + + RK L + +L++++VSG +IE+ A +P +W
Sbjct: 668 PLIKKRKNEIQEVIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWV 727
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
KV STK R+H P ++ + +L E+L + C A W FL+ FG +Y AV LA
Sbjct: 728 KVGSTKAVSRFHPPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLA 787
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHA 789
+DC+ +LA +++ N+ RP E +I I +GRHP++D +L D FVPN T+L
Sbjct: 788 TVDCIFSLAKVAKQGNYCRPTL---QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSLSQ 844
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNMGGKS YI+QVAL+ IMAQ+GS+VPA A + ++DGI+TRMGA+D+I
Sbjct: 845 DSERVMIITGPNMGGKSSYIKQVALVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIY 904
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF+EEL + + I+R + QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + L
Sbjct: 905 KGRSTFMEELTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTL 964
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
FVTHYP + +++ + VG YH+ +L S + G M+ D VT+LY++ G++
Sbjct: 965 FVTHYPPVCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPD-SVTFLYQITRGIAA 1023
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
S+G VA+LA +P + +A + +LE VS R + DL
Sbjct: 1024 RSYGLNVAKLADVPREVLQKAAHKSKELEGLVSLRRKRLECFTDL 1068
>gi|187956273|gb|AAI50760.1| MutS homolog 3 (E. coli) [Mus musculus]
Length = 1095
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 368/945 (38%), Positives = 535/945 (56%), Gaps = 86/945 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +++K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 187 YTPLELQYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTL-IGEDVNPL 305
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E +NYL+C+ ++ N+ + G ++ +GVV V+ +TG+VV
Sbjct: 306 IRLDDSVNIDEVMTDISTNYLLCIYEEKENIKDKKKG------NLSVGVVGVQPATGEVV 359
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D R LE + SL P ELLL LS TE ML+ A S +RVE +
Sbjct: 360 FDCFQDSASRLELETRISSLQPVELLLPSDLSVPTE-MLIQRATNVSVRDDRIRVERMNN 418
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y D+ QG+ ++ G++N+ + ALA
Sbjct: 419 TYFEYSHAFQTVTEFYAREIVDS-------------QGSQ--SLSGVINLEKPVICALAA 463
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
IR+LK+F LE+++ SF+ LS ME M ++ TL+ LE+L+N ++ G+LL +++
Sbjct: 464 VIRYLKEFNLEKMLSKPESFKQLSSGMEFMRINGTTLRNLEILQNQTDMKTKGSLLWVLD 523
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L+ WVT PL I+ARLDAVS++ S S
Sbjct: 524 HTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESS------------------- 564
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PD++RG+ I+H+ + EF +++++ +LQ L
Sbjct: 565 -------VFEQIENLLRKLPDVERGLCSIYHKKCSTQEFFLIVKSLCQLKSELQALM--- 614
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ + S LL+ LI+ A P ++ L +N AA GD L F
Sbjct: 615 ----PAVNSHVQSDLLRALIVEA--PELLSPVEHYLKVLNGPAAKVGDKTELFK-DLSDF 667
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWA 671
+ + + +Q + + RK L + +L++++VSG +IE+ A +P +W
Sbjct: 668 PLIKKRKNEIQEVIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWV 727
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
KV STK R+H P ++ + +L E+L + C A W FL+ FG +Y AV LA
Sbjct: 728 KVGSTKAVSRFHPPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLA 787
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHA 789
+DC+ +LA +++ N+ RP E +I I +GRHP++D +L D FVPN T+L
Sbjct: 788 TVDCIFSLAKVAKQGNYCRPTL---QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSLSQ 844
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNMGGKS YI+QVAL+ IMAQ+GS+VPA A + ++DGI+TRMGA+D+I
Sbjct: 845 DSERVMIITGPNMGGKSSYIKQVALVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIY 904
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF+EEL + + I+R + QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + L
Sbjct: 905 KGRSTFMEELTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTL 964
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
FVTHYP + +++ + VG YH+ +L S + G M+ D VT+LY++ G++
Sbjct: 965 FVTHYPPVCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPD-SVTFLYQITRGIAA 1023
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
S+G VA+LA +P + +A + +LE VS R + DL
Sbjct: 1024 RSYGLNVAKLADVPREVLQKAAHKSKELEGLVSLRRKRLECFTDL 1068
>gi|348527286|ref|XP_003451150.1| PREDICTED: DNA mismatch repair protein Msh3-like [Oreochromis
niloticus]
Length = 1114
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 380/958 (39%), Positives = 547/958 (57%), Gaps = 101/958 (10%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
+TPLEQQV++LK ++ D LL +E GYK+RFFGEDAE+AAK L I HLDHNFMT SIPT
Sbjct: 218 FTPLEQQVIQLKQQHKDALLAVECGYKYRFFGEDAEIAAKELNIVCHLDHNFMTCSIPTH 277
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDV--- 205
RL VHVRRLV+ G KVGVVKQTET+AIKA G + F R LSALYTK+TL EDV
Sbjct: 278 RLFVHVRRLVSHGHKVGVVKQTETSAIKASGANRNALFTRQLSALYTKSTL-VGEDVNPV 336
Query: 206 --------GGGEDGCGGESN-YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
GG +D + +L+C+ + N K++ + G+VAV+ STGD
Sbjct: 337 CRLGDVEEGGCDDVVSDPPDSFLICISE---NWDKLKKRLTA-------GLVAVQPSTGD 386
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML--LAYAGPASNVRVECASR 314
V+ F DG RS LE +L ++P E+L+ LS+QTE++L + A ++ RV R
Sbjct: 387 VLLDCFPDGPSRSELECRVLKINPVEILVPSDLSEQTERLLHSITNASAQADDRVRVERR 446
Query: 315 DC--FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D F A+ + S Y + Q ++ + ++ + L
Sbjct: 447 DSAEFEFASAMNTLTSFYCHT-----------------QAKGSRSLSSVASLESPVISCL 489
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
I++L++F LER++ +SFR L+ E MTLSA+TL+ LE+L N ++GS G+LL +
Sbjct: 490 GPLIQYLQEFNLERVLRSESSFRRLTCESEIMTLSASTLRNLEILNNQTDGSVKGSLLWV 549
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++HT T +G RL+R+WV+ PL D IS R DAV EI ES
Sbjct: 550 LDHTRTPFGRRLMRKWVSQPLTDLQSISERQDAVQEILESDS------------------ 591
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
L+S+ + L R PD++RGI I+H+ ++ EF + ++ G +LQ L
Sbjct: 592 --------LTLNSIRSLLSRLPDLERGICSIYHKKSSTQEFYVISSSLSRLGLELQTLL- 642
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
R +++S L S +P + A L +N++AA G+ L +G
Sbjct: 643 -PAMRSQISSVLLRSL-------LLDTPDQLIPAQSFLKVLNEKAAKSGNKTELFSDLSG 694
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN 669
F + R+ +Q+ E+ R L LE+ +VSG LIE+ + VP +
Sbjct: 695 -FPVLQERREQIQTVLREIQDHRKDIRLILKAPALEYTTVSGQEFLIEVKNSVSSIVPPD 753
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W K++STK RYHSP ++ +L E+L + C+ W +FL +FG +Y + A+
Sbjct: 754 WVKISSTKAVSRYHSPFLVDRYKKLQQLREQLMLDCQREWTNFLDQFGEHYHTMKRAISH 813
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNL 787
LA +DCL +LA +++ ++ RP D+ QI I GRHP +D ++ + +VPN T L
Sbjct: 814 LATMDCLFSLAEVAKQGDYCRPEVCDNKH--QITIRDGRHPAIDLLMGEHNQYVPNHTEL 871
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ IITGPNMGGKS YIRQVALI +MAQ+GS+VPAS+A + +LDGIYTRMGASD+
Sbjct: 872 QGDGRRTMIITGPNMGGKSSYIRQVALICVMAQMGSYVPASAACVGILDGIYTRMGASDN 931
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
I +GRSTF+EEL EAS I+ T QSLVI+DELGRGTSTHDG+AIAYATL+Y ++ K +
Sbjct: 932 IYKGRSTFMEELTEASDIISRATKQSLVILDELGRGTSTHDGIAIAYATLEYFIKDVKAL 991
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD--------VTYLYKV 959
LFVTHYP + +++ + V YH+++L + D +D D +T+LY++
Sbjct: 992 TLFVTHYPPLCELERVYPEHVSNYHMAFL-----LNEPDISADTDDGEVQPEFITFLYQL 1046
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
G + S+G VA+LA +P + A A +LE V +R +N+ DL ++SD+
Sbjct: 1047 TEGAAGRSYGLNVARLADIPDPILHTAAHKARELEKMVEARRKNKKLLLDLW-RISDR 1103
>gi|300794684|ref|NP_001178886.1| DNA mismatch repair protein Msh3 [Rattus norvegicus]
Length = 1105
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 360/935 (38%), Positives = 531/935 (56%), Gaps = 86/935 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +++K + D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 187 YTPLELQYLDVKQLHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTL-IGEDVNPL 305
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E +NYL+C+ ++ N+ + G ++ G+V V+ +TG+VV
Sbjct: 306 IRLDDSVNIDEAVTDTSTNYLLCIYEEKENIKDKKKG------NISFGIVGVQPATGEVV 359
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D R LE SL P ELLL LS+ TE ML+ A S +RVE +
Sbjct: 360 FDCFQDSASRLELETRTASLQPVELLLPSQLSEPTE-MLIRRATAVSVGDDRIRVERMNN 418
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A VM Y DT QG+ ++ G++++ + ALA
Sbjct: 419 THFEYSHAFQTVMEFYARETVDT-------------QGSQ--SLSGVIHLEKPVICALAA 463
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
IR+LK+F L++++ +F+ LS ME M ++ TL+ LE+L+N ++ G+LL +++
Sbjct: 464 IIRYLKEFNLDKVLSKPENFKQLSSGMEFMRINGTTLRNLEILQNQTDMKTRGSLLWVLD 523
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L++WVT PL I+ARLDA+S++ S S
Sbjct: 524 HTKTSFGRRKLKKWVTQPLLKLRDINARLDAISDVLHSESS------------------- 564
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PD++RG+ I+H+ + EF +++ + +LQ L
Sbjct: 565 -------VFEQIENLLRKLPDVERGLCSIYHKKCSTQEFFLIVKNLCQLKSELQALM--- 614
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ + S LL+ +L P ++ L +N++AA GD L F
Sbjct: 615 ----PAVNSHVQSDLLRARVLEV--PELLSPVEPYLKVLNEQAAKAGDKTELFK-DLSDF 667
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWA 671
+ + + +Q + + RK L + +L++++VSG ++E+ A VP +W
Sbjct: 668 PLIKKRKNEIQEVIHSIQMHLQELRKILKLPSLQYVTVSGQEFMVEIKNSAVSCVPTDWV 727
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
KV STK R+HSP V+ +L E+L + C A W FL+ FG +Y AV LA
Sbjct: 728 KVGSTKAVSRFHSPFVVENYRRLNQLREQLVLDCNAEWLDFLENFGEHYHTLCKAVDHLA 787
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHA 789
+DC+ +LA +++ ++ RP E +I I +GRHP++D +L D FVPN TNL
Sbjct: 788 TVDCIFSLAKVAKQGSYCRPTL---QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTNLSQ 844
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNMGGKS YI+QVAL+ IMAQ+GS+VPA A + ++DGI+TR GA+D+I
Sbjct: 845 DSERVMIITGPNMGGKSSYIKQVALVVIMAQIGSYVPAEEATIGIVDGIFTRRGAADNIY 904
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF+EEL + + I++ T +SLVI+DELGRGTSTHDG+AIAYATL+Y + K + L
Sbjct: 905 KGRSTFMEELTDTAEIIQKATQRSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTL 964
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
FVTHYP + +++ ++ VG YH+ +L S + G M+ D VT+LY++ G++
Sbjct: 965 FVTHYPPVCELEKRYPEQVGNYHMGFLVNEDGSKQDSGDMEQMPD-SVTFLYQITRGIAA 1023
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA +P + +A + +LE V+ R
Sbjct: 1024 RSYGLNVAKLADVPREILQKAAHKSKELEGLVNLR 1058
>gi|395825567|ref|XP_003785999.1| PREDICTED: DNA mismatch repair protein Msh3 [Otolemur garnettii]
Length = 1126
Score = 620 bits (1600), Expect = e-174, Method: Compositional matrix adjust.
Identities = 362/940 (38%), Positives = 529/940 (56%), Gaps = 96/940 (10%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +ELK ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 218 YTPLELQYIELKQQHKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 277
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 278 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSLFSRKLTALYTKSTL-IGEDVNPL 336
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E + YL+C+ ++ NV + G ++ +G+V V+ +TG+VV
Sbjct: 337 IKLDDAVNVDEIVTDTSTGYLLCICENKENVKDKKKG------NIFIGIVGVQPATGEVV 390
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRD 315
+ F D RS LE + L P ELLL LS+QTE ++ A + +RVE
Sbjct: 391 FDSFQDSASRSELETRISCLQPVELLLPSALSEQTETLIHRATAVSVRDDRIRVERMDNV 450
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
F A VM Y +D + Q +I GI+N+ + +LA
Sbjct: 451 YFEYSHAFQAVMEFY---AKDVVDIKGSQ------------SISGIINLTKPVICSLASL 495
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
IR+LK+F LE+++ +F+ LS E MT++ TL+ LE+L+N ++ G+LL +++H
Sbjct: 496 IRYLKEFNLEKVLSKPENFKQLSSEKEFMTINGTTLRNLEILQNQTDMKTRGSLLWVLDH 555
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T +G R L+ WVT PL I+ARLDAVSE+ S
Sbjct: 556 TKTAFGRRKLKSWVTQPLLKLREINARLDAVSEVLHSESG-------------------- 595
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+ + L + PDI+RG+ I+H+ + EF +++ + + + Q L
Sbjct: 596 ------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLHHLKSEFQALI---- 645
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+ + S LL+ +IL P ++ L +N++AA GD L F
Sbjct: 646 ---PAVNSHIQSDLLRTVILEI--PELLSPVEHYLKILNEQAAKIGDKTELFQ-DLSDFP 699
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAK 672
+ + + +Q +++ + RK L + ++++VSG +IE+ A VP +W K
Sbjct: 700 LIKKRKDEIQEVTDKIRIHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCVPTDWVK 759
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
V STK R+HSP ++ L E+L + C A W FL++F +Y A LA
Sbjct: 760 VGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSDHYHSLCKATHHLAT 819
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAE 790
+DC+ +LA +++ ++ RP E +I I +GRHPV+D +L D +VPN T+L
Sbjct: 820 VDCIFSLAKVAKQGDYCRPTV---QEEKKILIKNGRHPVIDMLLGEQDQYVPNGTSLSDN 876
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +
Sbjct: 877 SERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYK 936
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LF
Sbjct: 937 GRSTFMEELTDTAEIIRRATSQSLVILDELGRGTSTHDGIAIAYATLEYFITDVKSLTLF 996
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD----------VTYLYKVV 960
VTHYP + +++ + VG YH+ +L S + +S+QD VT+LY++
Sbjct: 997 VTHYPPVCELEKSYPQQVGNYHMGFLVS-------EDESEQDPGKEEQVPDFVTFLYQIT 1049
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
G++ S+G VA+LA +P + +A + +LE V+ +
Sbjct: 1050 RGIAARSYGLNVAKLADVPGEILQKAAHKSKELEGLVNMK 1089
>gi|387849|gb|AAB60711.1| MutS homologue; major mRNA product contains exon 1a and exon 9b;
alternative protein produced from exon 1b and exon 9b
[Mus musculus]
Length = 1091
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 367/947 (38%), Positives = 536/947 (56%), Gaps = 90/947 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +++K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 187 YTPLELQYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTL-IGEDVNPL 305
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E +NYL+C+ ++ N+ + G ++ +GVV V+ +TG+VV
Sbjct: 306 IRLDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKG------NLSVGVVGVQPATGEVV 359
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D R LE + SL P ELLL LS+ TE ML+ A S +RVE +
Sbjct: 360 FDCFQDSASRLELETRISSLQPVELLLPSDLSEPTE-MLIQRATNVSVRDDRIRVERMNN 418
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y D+ QG+ ++ G++N+ + ALA
Sbjct: 419 TYFEYSHAFQTVTEFYAREIVDS-------------QGSQ--SLSGVINLEKPVICALAA 463
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
IR+LK+F LE+++ SF+ LS ME M ++ TL+ LE+L+N ++ G+LL +++
Sbjct: 464 VIRYLKEFNLEKMLSKPESFKQLSSGMEFMRINGTTLRNLEILQNQTDMKTKGSLLWVLD 523
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L+ WVT PL I+ARLDAVS++ S S
Sbjct: 524 HTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESS------------------- 564
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PD++RG+ I+H+ + EF +++++ +LQ L
Sbjct: 565 -------VFEQIENLLRKLPDVERGLCSIYHKKCSTQEFFLIVKSLCQLKSELQALM--- 614
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ + S LL+ LI+ SP L +N AA GD L F
Sbjct: 615 ----PAVNSHVQSDLLRALIVELLSPV-----EHYLKVLNGPAAKVGDKTELFK-DLSDF 664
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWA 671
+ + + +Q + + RK L + +L++++VSG +IE+ A +P +W
Sbjct: 665 PLIKKRKNEIQEVIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWV 724
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
KV STK R+H P ++ + +L E+L + C A W FL+ FG +Y AV LA
Sbjct: 725 KVGSTKAVSRFHPPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLA 784
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHA 789
+DC+ +LA +++ N+ RP E +I I +GRHP++D +L D FVPN T+L +
Sbjct: 785 TVDCIFSLAKVAKQGNYCRPTL---QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSL-S 840
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNMGGKS YI+QVAL+ IMAQ+GS+VPA A + ++DGI+TRMGA+D+I
Sbjct: 841 DSERVMIITGPNMGGKSSYIKQVALVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIY 900
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF+E+L + + I+R + QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + L
Sbjct: 901 KGRSTFMEQLTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTL 960
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
FVTHYP + +++ + VG YH+ +L S + G M+ D VT+LY++ G++
Sbjct: 961 FVTHYPPVCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPD-SVTFLYQITRGIAA 1019
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLV 1012
S+G VA+LA +P + +A + +LE VS R + DL +
Sbjct: 1020 RSYGLNVAKLADVPREVLQKAAHKSKELEGLVSLRRKRLECFTDLWM 1066
>gi|405960067|gb|EKC26017.1| DNA mismatch repair protein Msh3 [Crassostrea gigas]
Length = 1104
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 366/960 (38%), Positives = 546/960 (56%), Gaps = 92/960 (9%)
Query: 80 SSQTTHNK----KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH 135
S +T+ NK KYTPLEQQ +ELK KYPD LL +E GYK+RFFGEDAE AA VL IY H
Sbjct: 200 SGKTSVNKRTKTKYTPLEQQYIELKEKYPDTLLFVECGYKYRFFGEDAENAAHVLKIYCH 259
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
DHNFMTASIP RL VHVRRLV AG+KVGVVKQ ETAA+KA G K+GPF R L+A+YT
Sbjct: 260 QDHNFMTASIPVHRLFVHVRRLVAAGYKVGVVKQMETAALKACGDNKSGPFTRQLTAMYT 319
Query: 196 KATL--EAAEDVGGG---EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR---LGV 247
K+TL +E++ G E+ C E YL+CV D V D DV+ +G+
Sbjct: 320 KSTLFVNFSEELQGEINVEESCSSE--YLMCVYD-----------VPCDR-DVKHQTIGI 365
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN- 306
+AV+ STGDV+Y F D LRS LE +L + P ELL + LS T+K+L A S
Sbjct: 366 LAVQPSTGDVIYDSFEDSDLRSQLETRILHIQPVELLSSKTLSDATQKLLSDIATMRSTD 425
Query: 307 ---VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
+R E + F A V Y+ G+D S ++ ++N
Sbjct: 426 DDRLRQEFCDDEVFEFRSAFTRVSDFYKKHGKDP------------------SVLQLVIN 467
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLS-GSMEMTLSANTLQQLEVLRNNSNG 422
+P + LA + +L+ FGL++ + ++F S S + L NT++ LE+ N ++G
Sbjct: 468 LPYAVISCLAAVLNYLENFGLQKALQDTSNFSQFSEKSKYLCLPGNTVRNLELFSNQNDG 527
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
E ++ +MN T+T YGSR L+ W+ PL D I R +AV+ I +++
Sbjct: 528 KEKNSVYWLMNQTVTKYGSRKLKAWLACPLKDNKEILQRQEAVNTILDNLNCS------- 580
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
+L+ + + LG+SPD++RG+ I+H + E V +++ A
Sbjct: 581 ------------------VLTKLRSVLGKSPDLERGLCSIYHEKCSVQELYVVCRSLSAA 622
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
+++ + +K ++ S LL L P ++ + +N+ A D
Sbjct: 623 LCEVEAM-------KKWLTENSCSLLLS---LFNEIPDLLSDVKQFKEALNEAAVKANDK 672
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP- 661
N+ + F ++ + + +++ + E+ R L +L++++V G+ +LIE+
Sbjct: 673 TNIFT-NEDDFPDIRKRKNQIETVRREIVDHRREVRIALRQPSLDYVTVMGVEYLIEVKN 731
Query: 662 ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
A+ VP +W K+NSTK R+HSP + + +L+ E+L + +AAW SFL++F +
Sbjct: 732 AHMNLVPKDWFKINSTKAVGRFHSPFIQDKVKELSQLQEQLVLDSQAAWLSFLQQFNDGF 791
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-- 778
++ AV LA DCL +LA++++ + F RP V D ++I GRHPV+ ++ +
Sbjct: 792 RRYKKAVDHLACFDCLFSLASVAKGQGFCRPQLVADDMCIEIK--QGRHPVIQHLIGEGG 849
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
+V NDT+L E IITGPNMGGKS YI+QVA+I I+AQ+GS+VPA SA L LD +
Sbjct: 850 QYVANDTDLQGSAERVMIITGPNMGGKSSYIKQVAIICILAQIGSYVPADSARLGTLDAV 909
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TRMGA+D I GRSTF+ EL E S IL T++SLVI+DELGRGTSTHDGVAIAYATLD
Sbjct: 910 FTRMGAADEIFSGRSTFMVELQETSDILSQATSRSLVILDELGRGTSTHDGVAIAYATLD 969
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
Y + + + LFVTHYP +A+ + + +VG +H+ ++ + D + Q +T+LY+
Sbjct: 970 YFISKIQSLTLFVTHYPILAEYEKLYPTNVGNFHMGFIVNETDTSASDDRK-QTITFLYQ 1028
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQE 1018
+V G++ S+G VA+LA + I A +++++LE + R A ++L+ DQE
Sbjct: 1029 LVQGMAARSYGLNVARLAGIHHDIIQGAELLSSQLEERIQKRRFQLEAFQNLMSTTRDQE 1088
>gi|449514801|ref|XP_002190416.2| PREDICTED: DNA mismatch repair protein Msh3 [Taeniopygia guttata]
Length = 963
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 363/971 (37%), Positives = 552/971 (56%), Gaps = 85/971 (8%)
Query: 80 SSQTTHNKK----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH 135
SS+T N++ YTPLE Q +E+K KY D +L +E GYK+RFFG+DAE+AAK L IY H
Sbjct: 42 SSETNLNRRTKSIYTPLELQFIEMKKKYKDAVLCVECGYKYRFFGQDAEIAAKELNIYCH 101
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LDHNFMTASIP+ RL VHVRRLV G KVGV+KQ ETAA+KA G K+ F R L+ALYT
Sbjct: 102 LDHNFMTASIPSHRLFVHVRRLVAKGHKVGVIKQMETAALKAAGENKSSLFSRKLTALYT 161
Query: 196 KATLEAAEDVG---GGEDGCGGE-------SNYLVCVVDDDGNVGKIRNGVFGDGFDVRL 245
K+TL EDV +D E NYL+C+ ++ ++ + G D+
Sbjct: 162 KSTL-IGEDVNPLLKLDDAVDVEEVTADVPDNYLLCICENGDSLKDRKKG------DIVT 214
Query: 246 GVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG--- 302
G+VA++ +TG+V++ F D RS LE+ +L L P E++L LS Q+EK++ +
Sbjct: 215 GIVAIQPTTGEVIFDSFRDCASRSELESRVLRLQPVEIILPSRLSDQSEKLIHSITSMRL 274
Query: 303 PASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
+R+E F A +V Y ++ QN+ V I+
Sbjct: 275 QDDRIRIERMENLNFEYSHAFQKVTDFY---AKEVPGTAGPQNLSV------------IL 319
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSN 421
++ + +LA I +LK+F LE+++ ++F+ LS E MTL+ T++ LE+L+N ++
Sbjct: 320 SLDKPVICSLAAVITYLKEFNLEKMLYNPSNFKQLSSEAEYMTLNGTTMKNLEILQNQTD 379
Query: 422 GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESV 481
G+LL +++HT T +G R L++WVT PL + I+ARLDAVSEI S S
Sbjct: 380 MKTKGSLLWVLDHTKTSFGRRRLKKWVTQPLLKLSEINARLDAVSEILLSESS------- 432
Query: 482 GQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY 541
+ + L + PD++RG+ +FH+ + EF ++
Sbjct: 433 -------------------VFGQIQNLLCKLPDLERGLCSVFHKKCSTQEFFLIVST--- 470
Query: 542 AGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
L +L ++ + V + S LLK +L P ++ + L +N+EAA GD
Sbjct: 471 ----LSRLDLEIQAFVPVIQSHVRSPLLKNALLEI--PELLSPVKQYLKILNEEAAKTGD 524
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
L F + + ++ +Q ++ + RKQ+ + E+++VSG LIE+
Sbjct: 525 KTQLFK-DLTDFPAIRKKKEEIQDVLSKIQLHLPDIRKQIKNPSAEYVAVSGQEFLIEVK 583
Query: 662 ANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
+ K VP +W V+ST+ R+HSP V L E+L + C A W FL F +
Sbjct: 584 NSHKSSVPSDWVMVSSTRAVSRFHSPLVTENYRVLQRLREQLGLACSAEWLCFLDHFSEH 643
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--L 777
Y A+ LA +DCL +LA +++ ++ RP D+ +I I +GRHPV+D +L
Sbjct: 644 YHPVSKAICHLATVDCLFSLAQVAKQGDYCRPTVQDNRR--EIIIKNGRHPVIDVLLGEQ 701
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D +VPN T+L + E IITGPNMGGKS YI+QVALI +MAQ+GSFVPA A + V+DG
Sbjct: 702 DQYVPNTTSLSGDGERVMIITGPNMGGKSSYIKQVALITVMAQIGSFVPAEEATIGVVDG 761
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TRMGA+D+I +GRSTF+EEL + + I+R T++SLVI+DELGRGTSTHDG+AIAYATL
Sbjct: 762 IFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSRSLVILDELGRGTSTHDGIAIAYATL 821
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD---VT 954
++ + + + LFVTHYP + +++ ++ +VG YH+++L S + G + +++ +T
Sbjct: 822 EHFIRDVQALTLFVTHYPSVCELQQRYPHAVGNYHMAFLLSEEDAGQHTGQLEENPEFIT 881
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKL 1014
+LY++ GVS S+G VA+LA +P + A + +LE V+ + + + +
Sbjct: 882 FLYQITKGVSARSYGLNVAKLADIPEEILKNAAHKSKELERIVNMKRRKMKSFAEAWNIN 941
Query: 1015 SDQEQEAQENM 1025
QE + +NM
Sbjct: 942 DSQELQKWKNM 952
>gi|400971|sp|P13705.3|MSH3_MOUSE RecName: Full=DNA mismatch repair protein Msh3; AltName: Full=Protein
repair-1; Short=REP-1; AltName: Full=Protein repair-3;
Short=REP-3
gi|200706|gb|AAA40052.1| Citations 2 and 3 contain revisions to the original sequence in
Citation 1. The name of the gene was changed after
Citation 1 from Rep-1 to Rep-3 to avoid naming conflict
with an unrelated gene.; complete cds of major mRNA [Mus
musculus]
Length = 1091
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 365/947 (38%), Positives = 535/947 (56%), Gaps = 90/947 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +++K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 187 YTPLELQYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTL-IGEDVNPL 305
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E +NYL+C+ ++ N+ + G ++ +GVV V+ +TG+VV
Sbjct: 306 IRLDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKG------NLSVGVVGVQPATGEVV 359
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D R LE + SL P ELLL LS+ TE ML+ A S +RVE +
Sbjct: 360 FDCFQDSASRLELETRISSLQPVELLLPSDLSEPTE-MLIQRATNVSVRDDRIRVERMNN 418
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y D+ QG+ ++ G++N+ + ALA
Sbjct: 419 TYFEYSHAFQTVTEFYAREIVDS-------------QGSQ--SLSGVINLEKPVICALAA 463
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
IR+LK+F LE+++ SF+ LS ME M ++ TL+ LE+++N ++ G+LL +++
Sbjct: 464 VIRYLKEFNLEKMLSKPESFKQLSSGMEFMRINGTTLRNLEMVQNQTDMKTKGSLLWVLD 523
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L+ WVT PL I+ARLDAVS++ S S
Sbjct: 524 HTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESS------------------- 564
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PD++RG+ I+H+ + EF +++++ +LQ L
Sbjct: 565 -------VFEQIENLLRKLPDVERGLCSIYHKKCSTQEFFLIVKSLCQLKSELQALM--- 614
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ + S LL+ LI+ SP L +N AA GD L F
Sbjct: 615 ----PAVNSHVQSDLLRALIVELLSPV-----EHYLKVLNGPAAKVGDKTELFK-DLSDF 664
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWA 671
+ + + +Q + + RK L + +L++++VSG +IE+ A +P +W
Sbjct: 665 PLIKKRKNEIQEVIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWV 724
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
KV STK R+H P ++ + +L E+L + C A W FL+ FG +Y AV LA
Sbjct: 725 KVGSTKAVSRFHPPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLA 784
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHA 789
+DC+ +LA +++ N+ RP E +I I +GRHP++D +L D FVPN T+L +
Sbjct: 785 TVDCIFSLAKVAKQGNYCRPTL---QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSL-S 840
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNMGGKS YI+QV L+ IMAQ+GS+VPA A + ++DGI+TRMGA+D+I
Sbjct: 841 DSERVMIITGPNMGGKSSYIKQVTLVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIY 900
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF+E+L + + I+R + QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + L
Sbjct: 901 KGRSTFMEQLTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTL 960
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
FVTHYP + +++ + VG YH+ +L S + G M+ D VT+LY++ G++
Sbjct: 961 FVTHYPPVCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPD-SVTFLYQITRGIAA 1019
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLV 1012
S+G VA+LA +P + +A + +LE VS R + DL +
Sbjct: 1020 RSYGLNVAKLADVPREVLQKAAHKSKELEGLVSLRRKRLECFTDLWM 1066
>gi|395511357|ref|XP_003759926.1| PREDICTED: DNA mismatch repair protein Msh3 [Sarcophilus harrisii]
Length = 1038
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 355/954 (37%), Positives = 538/954 (56%), Gaps = 90/954 (9%)
Query: 77 PTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL 136
P P+++ T + YTPLE Q +E+K ++ D +L IE GYK+RFFGEDAE+AA+ L IY HL
Sbjct: 127 PKPTNRRTKSI-YTPLELQYLEMKEQHKDAILCIECGYKYRFFGEDAEIAARELNIYCHL 185
Query: 137 DHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTK 196
DHNFMTASIPT RL VHVRRLV G KVGVVKQTETAA+KA G K+ F R L+ALYTK
Sbjct: 186 DHNFMTASIPTHRLFVHVRRLVAKGHKVGVVKQTETAALKAIGENKSSLFTRKLTALYTK 245
Query: 197 ATLEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLG 246
+TL EDV E +NYL+C+ ++ N+ + G ++ +G
Sbjct: 246 STL-IGEDVNPLIKLDDPVNVEEITSDTSNNYLLCICENKENMKDKQKG------NITIG 298
Query: 247 VVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA-- 304
+V V+ +TG+VV+ F D RS LE + L P ELLL +S TE+ + + +
Sbjct: 299 IVGVQPTTGEVVFDSFQDSVSRSELETRISKLQPVELLLPSEMSDHTERFIRSITSVSVQ 358
Query: 305 -SNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
+RVE F A ++ Y + +D+ + GI+N
Sbjct: 359 DDRIRVERMDNLYFEYSHAFQQITEFYAEV------------LDIKAS----QSFSGILN 402
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNG 422
+ + +LA IR+LK+F LE+++ + + LS +E MT++ L+ LE+L+N ++
Sbjct: 403 LDKPVICSLAAVIRYLKEFNLEKMLHNPRNLKKLSSELEFMTINGTALKNLEILQNQTDS 462
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
G+LL +++HT T +G R L++WVT PL I+ARLDAVSEI S S
Sbjct: 463 KFRGSLLWVLDHTKTPFGRRKLKKWVTQPLLKSREINARLDAVSEIILSESS-------- 514
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
+ + L + PDI+RG+ I+H+ + EF +++A+ +
Sbjct: 515 ------------------VFGHIQNHLCKLPDIERGLCSIYHKKCSTQEFFLIVKALCHL 556
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
+++Q L +TS+ + S LLK+ +L P + + +N++AA GD
Sbjct: 557 KREIQAL------IPAITSQ-IKSDLLKQFLLEI--PEHLNPVEHYFNILNEQAAKIGDK 607
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA 662
L F +++ ++ +Q +++ + R+ L + F +V G LIE+
Sbjct: 608 TELFK-DLTDFPSISKRKEEIQVVTTKINLHLQEIRRILKSPSAHFKTVLGQEFLIEVKN 666
Query: 663 NF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+ +P +W K+ STK R+HSP ++ L E+L + C W +FL F +Y
Sbjct: 667 SLVSSIPSDWVKIGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCNTEWLNFLDHFSEHY 726
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LD 778
AV LA +DC+ +LA +++ ++ RP+ E +I I +GRHPV+D +L D
Sbjct: 727 HSLCKAVHHLATVDCIFSLAKVAKQGDYCRPIL---QEERKIVIKNGRHPVIDVLLGEQD 783
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
+VPN T L + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI
Sbjct: 784 QYVPNSTYLSGDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEQATIGIVDGI 843
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TRMGA+D+I +G+STF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+
Sbjct: 844 FTRMGAADNIYKGQSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLE 903
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD----VT 954
+ + + + LFVTHYP + +++ + VG YH+ +L + + D++ VT
Sbjct: 904 HFIRDVESLTLFVTHYPPVCELEKTYPQWVGNYHMGFLVNEDESTQKPGQEDEEIPDFVT 963
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
+LY++ GV+ S+G VA+LA +P + +A + +LE R+ N KR
Sbjct: 964 FLYQITRGVASRSYGLNVAKLADVPEEILKKAAYKSKELE-----RLVNVKRKR 1012
>gi|348587534|ref|XP_003479522.1| PREDICTED: DNA mismatch repair protein Msh3-like [Cavia porcellus]
Length = 1122
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 370/947 (39%), Positives = 541/947 (57%), Gaps = 96/947 (10%)
Query: 79 PSSQTTHNKK----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA 134
PS NK+ YTPLE Q +ELK +YPD +L +E GYK+RFFGEDAE+AA+ L IY
Sbjct: 197 PSDPKAVNKRSKSVYTPLELQYLELKEQYPDAILCVECGYKYRFFGEDAEVAARELNIYC 256
Query: 135 HLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY 194
HLDH+FMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G + F R L+ALY
Sbjct: 257 HLDHSFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAVGDSRGSLFARKLTALY 316
Query: 195 TKATLEAAEDVGGGEDG---CG-----GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLG 246
TK+TL ED+ C +NYL+C + + G + LG
Sbjct: 317 TKSTL-IGEDILFQRSFSLICDRVDTVTATNYLLCAQEWREHEGHLV-----------LG 364
Query: 247 VVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGP 303
+ AV+ +TG+V+ F D RS LE + SL PAELLL LS+ TE ++ +A +
Sbjct: 365 LTAVQPATGEVLLDSFRDTVTRSELETRVCSLQPAELLLPACLSEPTEALVCRAMASSVR 424
Query: 304 ASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
+RVE F A V Y +D + + QG GI+N
Sbjct: 425 DDRIRVERMDNVYFEHSHAFQAVTQFY---AKDPVGS----------QG-----FSGIIN 466
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNG 422
+ + LA IR+LK+F LE+I+ + + LS +E MT++ TL+ LE+L+N ++G
Sbjct: 467 LEKPVICCLAAIIRYLKEFNLEKILSKPENLKQLSSELELMTVNGATLRNLEILQNQTDG 526
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
G+LL +++HT T +G R L++WVT PL + I+ARLDA+SE+ Y S +G
Sbjct: 527 KTRGSLLWVLDHTKTAFGKRQLKKWVTQPLLKVSQINARLDAISEVL-----YTGSSVLG 581
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
Q +E Q L + PD++RG++ I+H+ + EF +++ + +
Sbjct: 582 Q----------IESQ-----------LQKLPDLERGLSSIYHKKCSTQEFFLIVKTLCHL 620
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
+LQ L S + S LL+ IL P ++ L +N+ AA GD
Sbjct: 621 KSELQAL-------TPAVSSHVQSDLLQVCILEI--PELLNPVEHYLKILNEPAAKIGDK 671
Query: 603 LNLM-IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
L +SN F + + +Q ++ + + RK L + ++++VSG LIE+
Sbjct: 672 TELFNDLSN--FPIIKERKDEIQEVTVKIQTHLQEIRKILKNPSAQYVTVSGQEFLIEVK 729
Query: 662 --ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
A +P +W K+ STK R+ P V+ L E+L + C A W FL+ F +
Sbjct: 730 NSAVSSIPADWVKIGSTKAVSRFRPPLVMENYRHLQQLREQLVLDCGAEWLRFLESFNEH 789
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--L 777
AV+ LA +DC+ +LA +++ N+ RP ++ +I I +GRHPV+D +L
Sbjct: 790 CHSLCKAVRHLATVDCIFSLAKVAKQGNYCRPTLKEER---KILIKNGRHPVIDVLLGEH 846
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D +VPN T+L + E IITGPNMGGKS YI+QVALI +MAQVGS+VPA A + V+DG
Sbjct: 847 DQYVPNSTSLSEDSERVMIITGPNMGGKSSYIKQVALITLMAQVGSYVPAEEATIGVVDG 906
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
IYTRMGA+D+I GRSTF+EEL + S I+R TA+SLVI+DELGRGTSTHDG+AIAYATL
Sbjct: 907 IYTRMGAADNIYTGRSTFMEELTDTSEIIRKATARSLVILDELGRGTSTHDGIAIAYATL 966
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD----V 953
+Y + K + LFVTHYP + +++ + G VG +H+ +L + + G D + ++ V
Sbjct: 967 EYFIRDVKALTLFVTHYPPVCELERSYPGQVGNHHMGFLVT-EAEGETDPGAAEEVPDFV 1025
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
T+LY++ G++ S+G VA+LA +P + +A + + +LE ++++
Sbjct: 1026 TFLYQITRGIAARSYGLNVAKLADVPGEILKKAALKSKELEGLINTK 1072
>gi|390334498|ref|XP_001193092.2| PREDICTED: DNA mismatch repair protein Msh3-like [Strongylocentrotus
purpuratus]
Length = 1242
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 370/1000 (37%), Positives = 547/1000 (54%), Gaps = 120/1000 (12%)
Query: 20 TTASSSASSPRPPQQ-TPPPKIAATVSFSPAKRKVVSSLFPPKTPKKPKLSPHTLNPIPT 78
T A+S +S PR P + + + K K S T P++S L+ +
Sbjct: 329 TPATSMSSKPRTPSNGAQVTRCKGSPKLTALKNKF-SRHSGSSTTSSPRVSSTGLSDNVS 387
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
+ +YTPLEQQ +++K Y D +L++E GY++RFFGEDAE+A++ L I+ HLDH
Sbjct: 388 GKTSRVKKSQYTPLEQQFMKIKESYTDTVLLVECGYRYRFFGEDAEIASRDLNIFCHLDH 447
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
NFMTASIPT RL VHVRRLV G KVGVVKQ ETAA+KA G K PF R L+ALYTK+T
Sbjct: 448 NFMTASIPTHRLFVHVRRLVAKGHKVGVVKQMETAALKAAGDNKGQPFERKLTALYTKST 507
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
L V+ +TGDV+
Sbjct: 508 L-------------------------------------------------IVQPATGDVI 518
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY---AGPASNVRVECASRD 315
Y F+D S L+ L + P ELLL + LS +TEK+L + + +R+E D
Sbjct: 519 YDSFHDNGHLSELDTRLHHIQPVELLLPETLSDKTEKLLKDFRMSSQTEDRIRIERLPAD 578
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
F A+ EV S Y N E Q ++ ++++P + LA
Sbjct: 579 VFQYTSAVEEVSSFYGNQTE--------------TQSAKTGVLQSVLSLPKPVICCLAAL 624
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
+++LK+F L RI+ ++ R+ + S + + L A + LE+ +N +GSE GTLL ++NH
Sbjct: 625 LKYLKEFNLHRILQATSNMRAFNSSQDTLRLDACAFRNLEIFQNQVDGSEKGTLLWVLNH 684
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T YG R L +W++ PL D I +RL+AV+E+ +S S
Sbjct: 685 TKTRYGKRQLMKWLSQPLTDVQDIDSRLEAVTELLDSDSSSLDK---------------- 728
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
L V + RSP+++RG+ I+H+ +P+EF+ V +A+ ++ L
Sbjct: 729 -------LCQVFS---RSPNVERGLCSIYHKKCSPAEFVTVTRALSRLSLTVKTL----- 773
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
RE V K S LLK +++ P+++ L+++N++A GD L QF
Sbjct: 774 -RESVDIK---SVLLKDILIQM--PSLLEGIDSFLASINEKAVRDGDKTKL-FADPSQFP 826
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAK 672
V + + +++ K ++ RK++ M ++++VSG ++IE+ + KVP +W +
Sbjct: 827 SVHQCMQDIEAVKSKMAEHRQRLRKEVAMPTADYVTVSGNEYMIEVKNSQVKKVPKDWLQ 886
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
++ TK+ RY P V + +L E+L C+ AW FL+ FG Y ++ AVQ LA+
Sbjct: 887 ISGTKQVSRYRPPYVEESFKRLCQLREQLAADCQNAWLEFLESFGENYFSYRRAVQHLAS 946
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD--NFVPNDTNLHAE 790
DCL +LAT+S+ + RP D P +I I GRHPV+ T+ D +VPNDT+++ +
Sbjct: 947 FDCLLSLATVSKQDGYCRPTIHDG--PCKIDIKGGRHPVVSTLKADGDQYVPNDTSINVD 1004
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
C IITGPNMGGKS YI+QVALI IMAQ+G +VPA SA + +D I+TRMGASD I +
Sbjct: 1005 GLNCMIITGPNMGGKSSYIKQVALITIMAQLGCYVPAESASIGAVDAIFTRMGASDDIFR 1064
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
RSTF+ EL EAS I+ T +SLVI+DELGRGTSTHDGVAIA+AT +L+E KC+ LF
Sbjct: 1065 NRSTFMSELLEASDIMAKATCRSLVIMDELGRGTSTHDGVAIAFATARHLIEEVKCLTLF 1124
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
VTHYP +A++ + VG +H+S+L + D + +T+LY++V GV+ S+G
Sbjct: 1125 VTHYPPLAELSDHYPTQVGNFHMSFL----LHDAEDEDPVEKLTFLYQLVDGVAGRSYGL 1180
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
VA+LA +P + + +A+ + LE V+ RSAK D
Sbjct: 1181 NVARLADIPDAILEKASSKSHDLEKSVTVM---RSAKEDF 1217
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 62 TPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGE 121
T P++S L+ + + +YTPLEQQ +++K Y D +L++E GY++RFFGE
Sbjct: 148 TTSSPRVSSTGLSDNVSGKTSRVKKSQYTPLEQQFMKIKESYTDTVLLVECGYRYRFFGE 207
Query: 122 DAEM 125
DAE+
Sbjct: 208 DAEI 211
>gi|302799220|ref|XP_002981369.1| hypothetical protein SELMODRAFT_20623 [Selaginella moellendorffii]
gi|300150909|gb|EFJ17557.1| hypothetical protein SELMODRAFT_20623 [Selaginella moellendorffii]
Length = 655
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 342/696 (49%), Positives = 456/696 (65%), Gaps = 44/696 (6%)
Query: 244 RLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGP 303
R GVVAVE ST DV+YG F D R+ LE+ LL+ +PAELLL LS T+K+L+ YAG
Sbjct: 1 RFGVVAVETSTRDVMYGHFLDTVTRTELESRLLACAPAELLLSASLSTSTKKLLMDYAG- 59
Query: 304 ASNVRVECASRDCFIGGGALAEVMSLYENMG---EDTLSNNEDQNMDVPEQGNHRSAIEG 360
A++VR E + F GG +A + Y ++ + L D ++V ++
Sbjct: 60 AADVRAEKTPENSFENGGTVAALADFYGSLASSKKGCLDEKVDAGLEVI------FYLQA 113
Query: 361 IMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNS 420
+M MP++ V A A +LKQF LE ++ LGA FR +G EMTLS NT++QLE+L N +
Sbjct: 114 LMTMPEIVVAAFAHIFAYLKQFNLENVLRLGALFRPFAGQQEMTLSPNTIRQLEILHNQT 173
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
+G+E G+L +MNHT T +G+RLL+ WV HPL DR LIS RLDAV+EIAES+G
Sbjct: 174 DGTENGSLFWLMNHTKTAFGARLLKYWVAHPLRDRMLISQRLDAVAEIAESIG------- 226
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
+K T+ +S L LG+ PD++RGITRI+H+TAT EFI V+ AI+
Sbjct: 227 -----DKGRGTTVATL------ASTLLLLGKLPDLERGITRIYHKTATTYEFINVINAIM 275
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG 600
A Q Q++ + SALL RLI +S +VI A KL++++N EAA G
Sbjct: 276 KAASQFQRV------------RDARSALLIRLISAVTSTSVIDHANKLVTSLNAEAAAAG 323
Query: 601 DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL 660
D +NL + GQ+ EV ++ ++S +E+L+S + RK L NLE++SVSG++ L+E+
Sbjct: 324 DKINLFV--AGQYPEVYECKENIKSIEEDLESFLPSYRKLLKCSNLEYLSVSGMSFLVEV 381
Query: 661 PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
P +VP +W K+NSTKK RYH PEVL A +++ALA E+L I C AWD FL F Y+
Sbjct: 382 PCAQRVPADWVKINSTKKANRYHPPEVLEASERMALAKEQLNISCAKAWDMFLTGFTSYH 441
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
EF+AAVQALAALDCL++LA +S N+ +VRP FVD E + I GRHPVLD+ L D F
Sbjct: 442 MEFRAAVQALAALDCLYSLAVVSCNQGYVRPEFVD--EACLLKIEGGRHPVLDSTLQDAF 499
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPNDT L E E QIITGPNMGGKSCYIRQVALI IM+Q+G +VPA++A+LHV ++T
Sbjct: 500 VPNDTVLSGEGERSQIITGPNMGGKSCYIRQVALITIMSQIGLYVPAATAKLHVFVAVFT 559
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA D IQ+G STF EEL+EAS IL T++SLV++DEL RGTSTHD +AIAYATL +L
Sbjct: 560 RMGAMDRIQRGSSTFFEELSEASTILHKATSRSLVVIDELERGTSTHDSLAIAYATLHHL 619
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL 936
L+ +C LFVTHY + ++ F V H+SYL
Sbjct: 620 LQEVQCFTLFVTHYLNVTEVVKLFPSRVQACHMSYL 655
>gi|126321607|ref|XP_001369923.1| PREDICTED: DNA mismatch repair protein Msh3-like [Monodelphis
domestica]
Length = 1236
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 352/942 (37%), Positives = 531/942 (56%), Gaps = 89/942 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K ++ D +L IE GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 300 YTPLELQYLEMKEQHKDAILCIECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 359
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 360 RLFVHVRRLVAKGHKVGVVKQTETAALKALGENKSSLFTRKLTALYTKSTL-IGEDVNPL 418
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E +NYL+C+ ++ N+ + +V +G+V V+ +TG+VV
Sbjct: 419 IKLDDPVNVEEIASDTSNNYLLCICENKENLKDKQKR------NVTIGIVGVQPATGEVV 472
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA---SNVRVECASRD 315
+ F D RS LE +L L P ELLL +S TEK + + + +R+E
Sbjct: 473 FDSFQDSISRSELETRILKLQPVELLLPSEMSDHTEKFIKSVTSVSVRDDRIRIERMDNL 532
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
F A + Y + +DV + GI+N+ L + +LA
Sbjct: 533 YFEYSHAFQLITEFYAEV------------LDVKAS----QSFSGILNLDKLVISSLAAI 576
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
IR+LK+F LE+++ +F+ S ME MT++ L+ LE+L+N + G+LL +++H
Sbjct: 577 IRYLKEFNLEKMLYNPRNFKKFSSEMEFMTINGTALKNLEILQNQVDSKFRGSLLWVLDH 636
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 637 TKTPFGRRKLKKWVTQPLLKSKEINARLDAVSEVLLSESS-------------------- 676
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+L+ + L + PD++RG+ I+H+ + EF +++A+ + ++Q L
Sbjct: 677 ------VLAHIQNHLCKLPDLERGLCSIYHKKCSTQEFFIIVKALCHLKIEIQALI---- 726
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+ + S LLK+ +L P ++ + ++++AA GD L F
Sbjct: 727 ---PAINSQVKSDLLKKFLLEI--PELLDPVEHYFNILSEQAAKIGDKTELFK-DLSDFP 780
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAK 672
++ ++ +Q +++ + R+ L ++ + +V G LIE+ + +P +W K
Sbjct: 781 SISTRKEEIQMVTAKVNLHLQEIRRLLKNPSVHYKTVLGQEFLIEVKNSLTSSIPSDWVK 840
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ STK R+HSP ++ L E+L + C W +FL F +Y AV LA
Sbjct: 841 IGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCNTEWLNFLDHFSEHYHSLCKAVHHLAT 900
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAE 790
+DC+ +LA +++ ++ RPV E +I I +GRHPV+D +L D +VPN T L +
Sbjct: 901 IDCIFSLAKVAKQGDYCRPVL---QEERKIVIKNGRHPVIDMLLGEQDQYVPNSTYLSGD 957
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +
Sbjct: 958 SERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYK 1017
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL++ + + + LF
Sbjct: 1018 GQSTFMEELADTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEHFIRDVQSLTLF 1077
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD----VTYLYKVVPGVSES 966
VTHYP + +++ ++ VG YH+ +L + + + D++ VT+LY++ GV+
Sbjct: 1078 VTHYPPVCELEKIYSRWVGNYHMGFLVNEEESTQEPGQEDEEIPDFVTFLYQITRGVASR 1137
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
S+G VA+LA +P + +A + +LE R+ N KR
Sbjct: 1138 SYGLNVAKLADVPGEILKKAAYKSKELE-----RLVNVKRKR 1174
>gi|345568137|gb|EGX51038.1| hypothetical protein AOL_s00054g774 [Arthrobotrys oligospora ATCC
24927]
Length = 1161
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 352/948 (37%), Positives = 544/948 (57%), Gaps = 99/948 (10%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------------- 133
KK TPLEQQVV++K KY D +L++EVGYK+RFFGEDA +AA VL I
Sbjct: 257 KKLTPLEQQVVDIKEKYADTVLVVEVGYKYRFFGEDARIAASVLSIVCIPGRMKFTYDPS 316
Query: 134 -AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
AHLD F +ASIP RL+VHV+RL+ AG+KVGVV+Q ETAA+KA G + PF R L+
Sbjct: 317 EAHLD-KFASASIPVHRLHVHVKRLITAGYKVGVVRQLETAALKAAGDNRNAPFVRKLTN 375
Query: 193 LYTKATLEAAEDVGGGED--------GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR 244
LYTK T +D+ G ++ G + YL+C+ + G G G V+
Sbjct: 376 LYTKGTY--IDDIDGVDEHDAVGAGSGGAASTGYLLCITEKLG-------GGAGADEKVK 426
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA 304
+G++AV+ STGD++Y EF+DGF+R+ +E LL ++P ELL+ LSK T+K++ AG
Sbjct: 427 VGILAVQPSTGDIIYDEFDDGFMRTEIETRLLHIAPCELLILGELSKATDKLVTHLAGST 486
Query: 305 SNV-----RVECASRDCFIGGGALAEVMSLY-ENMGEDTLSNNEDQNMDVPEQGNHRSAI 358
+NV RVE R + + V Y E + + + +D +D+
Sbjct: 487 NNVFGDGVRVEKVERPKKMQTTSPIHVSEFYAEKLKSEAAALPQDL-LDI---------- 535
Query: 359 EGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN 418
+ +PDL L+ I HL +GLE + L F+S S M L+ NTL LE+ RN
Sbjct: 536 --VTQLPDLVTICLSAMITHLTAYGLEHVFDLTKYFKSFSARSHMLLNGNTLSSLEIYRN 593
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
++ SE G+L ++HT T +G RLLR+WV PL DR+ + AR++AV E+ S TS
Sbjct: 594 QTDFSEKGSLFWTLDHTSTRFGRRLLRKWVGRPLLDRSQLEARINAVEEMLSS-----TS 648
Query: 479 ESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA 538
E Q L ++LT++ D+++G+ RI++ AT E ++
Sbjct: 649 ERTQQ------------------LKNLLTTV--RYDLEKGLIRIYYGKATRPEVFNILNT 688
Query: 539 ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAAD 598
+L K + +++ + S ++ A+ AS P ++ LS + +AA
Sbjct: 689 LLRIAKTFR--NVESPEQCGYDSPLINGAM-------ASLPTILETVEGYLSKFDHKAAT 739
Query: 599 QGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLI 658
+ D + + ++ + ++ A++ + +L + K + +NL++++VSGI +L+
Sbjct: 740 KDDKYSFFKEVD-EYDYILDSKMAIKGVEFDLQEHLPDAAKAVKKKNLDYVTVSGIDYLV 798
Query: 659 ELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF 716
E+ + VP +W K++ TKK R+H+PEVL L + E L C A+ F+ +
Sbjct: 799 EVENSGIKNVPASWVKISGTKKVSRFHTPEVLRLLRERDQRKETLANNCDRAFKDFMLQI 858
Query: 717 GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL 776
G Y E++ VQ+LA LDCL +LA +++ + +P DD ++I + GRHP+++ +L
Sbjct: 859 AGQYQEYRDVVQSLATLDCLVSLANVAQLPGYCKPTITDD---IEIKVKQGRHPMVEQLL 915
Query: 777 LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
++ +VPND +L A++ ++TGPNMGGKS Y+RQ+ALI IMAQ+GS+VPA SA++ +LD
Sbjct: 916 IETYVPNDIDLGADQRRTLLVTGPNMGGKSSYVRQIALIAIMAQIGSYVPADSAKIGLLD 975
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
++TRMGA D++ G STF+ EL+E S IL+ T +SLVI+DELGRGTSTHDGVAIAY+
Sbjct: 976 AVFTRMGAFDNMMTGESTFMVELSETSDILKQATPRSLVILDELGRGTSTHDGVAIAYSV 1035
Query: 897 LDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
LDY++ K M LFVTHYP +A ++ + V H+ + + + +D+T+L
Sbjct: 1036 LDYMVSSIKAMTLFVTHYPILAQMEKAYPREVVNAHMRFEEA--------TDGSEDITFL 1087
Query: 957 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNR 1004
Y++ G + S+G VA+LA +P + + A V + +LE E+ R R
Sbjct: 1088 YQIAEGTAHRSYGLNVAKLANVPQAVLDTAAVKSKELEVEIKGRETAR 1135
>gi|345304732|ref|XP_001512218.2| PREDICTED: DNA mismatch repair protein Msh3 [Ornithorhynchus
anatinus]
Length = 1057
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 356/935 (38%), Positives = 533/935 (57%), Gaps = 84/935 (8%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 155 YTPLELQFMEMKQQHKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 214
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG-- 206
RL VHVRRLV G KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 215 RLFVHVRRLVANGHKVGVVKQTETAALKAIGENKSSLFTRKLTALYTKSTL-IGEDVNPL 273
Query: 207 ------GGED-GCGGESNYLVCVVDDDG--NVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
ED SNYL+C+ ++ NV + +F +G+V V+ +TG+V
Sbjct: 274 TLDDTVDVEDTAIDTSSNYLLCICENQNQENVKDKKGAIF-------IGIVGVQPATGEV 326
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASR 314
V+ F D RS LE +L + P ELLL LS Q+EK + + +RVE
Sbjct: 327 VFDSFQDSGSRSELETRILRMQPVELLLPSHLSDQSEKCINRITSICVRDDRIRVERMDS 386
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A + Y +D L QG + GI+++ + +LA
Sbjct: 387 LHFEYSQAFQLMTEFY---SKDVLGI----------QGP--PSFSGILDLDKPVICSLAA 431
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
I++LK+F LE+ + +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++
Sbjct: 432 VIKYLKEFNLEKTLYNTRNFKQLSSEMEYMTINGTTLKNLEILQNQTDLKTKGSLLWVLD 491
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L++WVT PL I+ARLDAVSE+ Y +S
Sbjct: 492 HTKTPFGRRRLKKWVTQPLLKSREINARLDAVSEVL----LYESS--------------- 532
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L R PD++RG+ I+H+ + EF +++ + ++Q L
Sbjct: 533 -------MFGQLQNHLCRLPDLERGLCSIYHKKCSTQEFYLIVKNLCRLKTEIQPLI--- 582
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ S+LL++L L P ++ L +N++AA GD +L F
Sbjct: 583 ----PAIHSNVKSSLLRKLFLEI--PELLDPVEYYLKILNEQAAKTGDKTHLFQ-DLTDF 635
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWA 671
+ + + +Q ++ + + R+ L + ++++VSG +IE+ + +P +WA
Sbjct: 636 PSIRKRKDEIQDVTSQIHAHLQEIRRILKNPSAQYVTVSGQEFMIEVKNSLTSSIPSDWA 695
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
KV STK R+HSP ++ L E+L + C W +FL F +Y AV LA
Sbjct: 696 KVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCNTEWLNFLDHFSEHYHSLCKAVHHLA 755
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHA 789
+DC+ +LA +++ ++ RP D E +I I +GRHPV+D +L D +VPN T+L
Sbjct: 756 TVDCIFSLAKVAKQGDYCRPTVED--EGRKIVIKNGRHPVIDVLLKEQDQYVPNSTHLSG 813
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNMGGKS YI+QVALI +MAQ+GS+VPA A + ++DG++TRMGA+D+I
Sbjct: 814 DSERVMIITGPNMGGKSSYIKQVALITLMAQIGSYVPAEEASIGIVDGVFTRMGAADNIY 873
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF+EEL + + I++ T+QSLVI+DELGRGTSTHDG+AIAYATL+Y ++ + L
Sbjct: 874 KGRSTFMEELTDTAEIIQKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIKAVTSLTL 933
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVM----GPMDSKSDQDVTYLYKVVPGVSE 965
FVTHYP + +++ + VG YH+ +L + + G D ++ + VT+LY++ GV+
Sbjct: 934 FVTHYPPVCELEKSYPQEVGNYHMGFLVNEEECEQSPGSEDEQTPEFVTFLYQLTRGVAA 993
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA +P + +A + +LE V+ +
Sbjct: 994 RSYGLNVAKLADVPGEILKKAAHKSKELEELVNMK 1028
>gi|410923475|ref|XP_003975207.1| PREDICTED: DNA mismatch repair protein Msh3-like [Takifugu rubripes]
Length = 1084
Score = 607 bits (1565), Expect = e-170, Method: Compositional matrix adjust.
Identities = 378/972 (38%), Positives = 559/972 (57%), Gaps = 95/972 (9%)
Query: 74 NPIPTPSSQTTHNKK------YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAA 127
N +P P +++ +K YTPLEQQVV+LK ++ D LL +E GYK+RFFGEDAE+AA
Sbjct: 169 NLLPNPVAKSRRSKNVHATRVYTPLEQQVVQLKEQHKDALLAVECGYKYRFFGEDAEIAA 228
Query: 128 KVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFG 187
KVL I+ HLDHNFMT SIPT RL VHVRRLV+ G KVGV+KQTET AIKA G + F
Sbjct: 229 KVLNIFCHLDHNFMTCSIPTHRLFVHVRRLVSHGHKVGVIKQTETTAIKASGTSRNTLFT 288
Query: 188 RGLSALYTKATLEAAEDV------GGGEDGCGGES------NYLVCVVDDDGNVGKIRNG 235
R LS LYTK+TL EDV E+G G++ ++L+CV + K+R
Sbjct: 289 RQLSGLYTKSTL-VGEDVNPVCKLADVEEGSSGDAALDPPESFLLCVSE---TWDKLRK- 343
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEK 295
+ +G+V ++ STGDV++ F DG RS LE+ ++ ++P E+L+ S +T +
Sbjct: 344 ------QLTVGLVVIQPSTGDVLFDCFPDGPSRSELESRVVKINPVEILVPSDASPETHR 397
Query: 296 ML--LAYAGPASNVRVECASRDC--FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQ 351
++ +A A ++ RV RDC F A+ V Y + E+
Sbjct: 398 LVQSIANASTQADDRVRVEKRDCGQFEFASAMNTVTEFYCH----------------SEE 441
Query: 352 GNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTL 410
RS + + ++ + L I++L++F LER++ +SF+ LS + E M L+A TL
Sbjct: 442 KGCRS-LSSVASLESPVICCLGPLIQYLREFNLERVLRSESSFQRLSRASEGMRLNAATL 500
Query: 411 QQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE 470
+ LE+L N ++G G+LL +++HT T +G RLLRRWV PL D +S RLDAV EI E
Sbjct: 501 RNLEILNNQTDGGAKGSLLWVLDHTRTHFGRRLLRRWVGQPLTDSESVSQRLDAVQEILE 560
Query: 471 SMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPS 530
S + VT L+ V + L PD+ RGI I+HR ++
Sbjct: 561 S-----------------NSVT---------LNPVRSLLSHLPDLDRGIGSIYHRKSSTQ 594
Query: 531 EFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLS 590
EF + + L +L ++ E + S+LL L+L +P ++ A L
Sbjct: 595 EFYIICSS-------LARLSLELEALLPAIQSQVRSSLLTGLLL--DTPNLLAPAQNFLK 645
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
+N++AA G+ L F + ++ +Q +E+ + R L + ++ +
Sbjct: 646 MLNEKAAKSGNKTELFS-DLAAFPVLKERKEQIQDVIDEIHNHRQEIRLTLKVPTFDYTT 704
Query: 651 VSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
VSG LIE+ + VP W KV+STK RYH+P ++ +L E+L + C++
Sbjct: 705 VSGQEFLIEVKNSLSSSVPPEWVKVSSTKAVSRYHTPFLVERYRKLLQLREQLLLDCQSE 764
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGR 768
W FL +FG +Y + A+ LA LDCL +LA +++ ++ RP V H QI I GR
Sbjct: 765 WIHFLDQFGEHYHLMKRAISHLATLDCLFSLAEVAKQGDYCRPE-VSKHRR-QIVIRDGR 822
Query: 769 HPVLDTILLDN--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
HP +D ++ +N +VPN T L + + IITGPNMGGKS YIRQVALI +MAQ+GS+VP
Sbjct: 823 HPAIDLLMGENNQYVPNVTELQGDGKRAMIITGPNMGGKSSYIRQVALICLMAQMGSYVP 882
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
AS A+L +LDGIY RMGASD+I Q RSTF+EEL+EAS I+ T +SLVI+DELGRGTST
Sbjct: 883 ASQAQLGILDGIYVRMGASDNIFQRRSTFMEELSEASEIVSRATERSLVILDELGRGTST 942
Query: 887 HDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH-KVMGPM 945
HDG+AIA+ATL++ + K + LFVTHYP + +++ + V YH+++L + +
Sbjct: 943 HDGIAIAHATLEHFIRDVKALTLFVTHYPPLCELEHVYPEHVSNYHMAFLLNEPDIAADA 1002
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRS 1005
D + + +T+LY++ G + S+G VA+LA +P + A A +LE+ V++R + +
Sbjct: 1003 DEVTPEFITFLYQLTEGAAGRSYGLNVARLADIPDPILHTAAGKARELESAVNARRKKKK 1062
Query: 1006 AKRDLLVKLSDQ 1017
RDL ++SD+
Sbjct: 1063 LLRDLW-RVSDR 1073
>gi|255076489|ref|XP_002501919.1| DNA mismatch repair protein MSH3 [Micromonas sp. RCC299]
gi|226517183|gb|ACO63177.1| DNA mismatch repair protein MSH3 [Micromonas sp. RCC299]
Length = 1200
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 386/986 (39%), Positives = 553/986 (56%), Gaps = 90/986 (9%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH--LD 137
+S+ + + K TPLE+QV + K +P VLL+IEVGYKF F+GEDAE+A+KVL I+A+ D
Sbjct: 191 TSKASASVKLTPLEEQVKKCKADHPGVLLLIEVGYKFHFYGEDAEIASKVLNIFAYHPKD 250
Query: 138 HNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP---GKAGPFGRGLSALY 194
++TAS+P RL+++VRRLV+AG KVGV++QTETAA+KA G GK+G F R L LY
Sbjct: 251 RLYLTASVPVPRLHIYVRRLVDAGHKVGVIRQTETAALKAAGETEGGKSGVFERRLVGLY 310
Query: 195 TKATLEA----AEDVGGGEDG------CGGESNYLVCVVDDDGNVGKIRNGVFGDGFD-- 242
T++TLEA A + ++G G S YL+CV + G+ DG D
Sbjct: 311 TRSTLEAGVAIASETSTNDEGESAAAQDGRTSAYLLCVAERPGDEND-------DGSDRG 363
Query: 243 VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLA-YA 301
R+GV A++ STGDV + EF D +R GLEA L+ SP E+L+ +P+S T KM+ A Y
Sbjct: 364 TRIGVAAIDASTGDVRHDEFVDTRMRPGLEARLILTSPQEVLVVEPVSSATSKMIDAMYG 423
Query: 302 GPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN----HRSA 357
G S VRVE +R G A ++ P GN
Sbjct: 424 GSTSGVRVERVARGSGYEDGGAAAAVAAATAEFAARSGGRSGGVGATPAGGNVGEDAGDN 483
Query: 358 IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR 417
+ +N+P+ +A+A+ L+QFGL+ ++ L +FR +S + EM L+ N L+QLE+LR
Sbjct: 484 VGDALNLPEQTTRAVAVAFDWLRQFGLDGMLLLAPTFRPMSAAGEMNLAPNVLRQLEMLR 543
Query: 418 NNSNGSEYGTLLHIMNH-TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYR 476
+G G+LL +++ T T G+R +RRWV+HPL + + I RLDAV E+ R
Sbjct: 544 TR-DGKHRGSLLWLLDDGTRTAAGARAIRRWVSHPLTNGDAIRTRLDAVEEL-------R 595
Query: 477 TSESVGQHDEKNSDVTIVEPQFYYILS--SVLTSLGRSPDIQRGITRIFHRTATPSEFIA 534
T G +EP F + D++R + RIFH TATP+E +A
Sbjct: 596 TEADAG---------GALEPVFESLAKYHGARAGGKGGGDVERYLGRIFHGTATPAELVA 646
Query: 535 VMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
+ A+ K++ D R + L + L+ A PAV+ +LLS V+
Sbjct: 647 ALSAVGGFAKEIVSAGGDSLGR---------TGLTRELLAAACDPAVVHTCDELLSRVDV 697
Query: 595 EAADQGDLLNLMII--SNGQFSEVARARKAVQSAKEELDSLINMCRKQL----------- 641
EAA G ++ +F ++ R R+AV SA+ L L+ R+++
Sbjct: 698 EAARAGRATAATVLLPDPVKFPQLERTREAVASAERALQDLLPALRQKIIDNSKGGGKPQ 757
Query: 642 -----GMR---NLEFMSV----SGITHLIELPANFK-VPLNWAKV--NSTKKTIRYHSPE 686
G++ L + SV S + HLIELP +P NW +V N +KK +RYH PE
Sbjct: 758 AGGKGGLQLTPRLTYTSVRQGSSQVEHLIELPDTLPGIPTNWIRVSTNKSKKVVRYHPPE 817
Query: 687 VLTALDQLALANEELTIVCRAAWDSFL-KEFGGYYAEFQAAVQALAALDCLHALATLSRN 745
VL A L + E + C AAW FL + G + E +AA +A A LD L +LA+++R
Sbjct: 818 VLDAAATLEQSRERHSAACAAAWRGFLADDAAGAFLELRAATRAAAGLDALASLASVARL 877
Query: 746 KNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQIITGPNMGG 804
+V+P + D P I GRHP L+ +L +FVPN +L + +ITGPNMGG
Sbjct: 878 DGYVKPTLLPDGHPPTIRFVDGRHPTLEAVLDPGSFVPNSVDLRNDAVRALVITGPNMGG 937
Query: 805 KSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASY 864
KSC+IRQ AL+ +MAQ+GS+VPA+ AEL VLDG+YTRMGASD++ G STFLEE++E S
Sbjct: 938 KSCFIRQTALLALMAQMGSYVPATVAELTVLDGVYTRMGASDNLAMGSSTFLEEMSECSS 997
Query: 865 ILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTK 923
ILR+ T +SLV++DELGRGTSTHDGVA+A+ATLDY++ K M LFVTHYP +A D+ K
Sbjct: 998 ILRSATEKSLVVLDELGRGTSTHDGVAVAHATLDYIISDLKPMCLFVTHYPDVARDLARK 1057
Query: 924 FTGSVGTYHVSYL-TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSC 982
T + SY+ + +LY++ PGV+ S+G VA++A +P
Sbjct: 1058 HRKHCDTQYPSYVEVDENDENGGAEGGAGRIEFLYRLTPGVAHRSYGLNVARMAGVPADV 1117
Query: 983 ISRATVIAAKLEAEVSSRVQNRSAKR 1008
++ A A ++E V++R R R
Sbjct: 1118 VAAAASKAREMEEAVAARAMARDVAR 1143
>gi|327263145|ref|XP_003216381.1| PREDICTED: DNA mismatch repair protein Msh3-like [Anolis
carolinensis]
Length = 986
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 361/945 (38%), Positives = 537/945 (56%), Gaps = 95/945 (10%)
Query: 80 SSQTTHNKK----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH 135
SS T+ NK YTPLE Q +E+K +Y D +L +E GYK+RFFGEDAE+AAK L IY H
Sbjct: 68 SSITSINKSTKGGYTPLELQFLEMKNQYKDAILCVECGYKYRFFGEDAEIAAKELNIYCH 127
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
+HNFM+ASIPT RL VHVRRLV G+KVGVVKQ ETAA+KA G ++ F R L+ALYT
Sbjct: 128 KNHNFMSASIPTHRLFVHVRRLVAKGYKVGVVKQIETAALKAAGENRSSLFARKLTALYT 187
Query: 196 KATLEAAEDVGG-------------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD 242
K+T+ EDV D C NYL+C+ + N+ + +N D
Sbjct: 188 KSTI-LGEDVNPLLKLNNLVDAEEIPSDVC---DNYLLCISESKENI-RDKNQ------D 236
Query: 243 VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG 302
V +GVVAV+ +TG+V++ F D R LE+++L L P E++L + +S QTE ++ A
Sbjct: 237 VHIGVVAVQPTTGEVIFDSFQDSAARLELESLILRLQPVEIILPKDVSDQTENIISAVTS 296
Query: 303 ---PASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE 359
+R+E F A + Y N D+ G+H A+
Sbjct: 297 LRLQDDRIRIERMENKLFENSSAFQLITDFYSNQVLDS-------------TGSH--ALS 341
Query: 360 GIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRN 418
++ + + + +LA I +LKQF LERI+ ++F+ LS E MTL+ TL+ LE+L+N
Sbjct: 342 VLVKLDKIVLCSLAAVIVYLKQFNLERILYNPSNFKMLSSEPEYMTLNGITLKNLEILQN 401
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
S+ G+L I++HT T +G R L++WVT PL + I++RLDAVSE+ S S
Sbjct: 402 QSDMKSNGSLFWILDHTKTSFGRRRLKKWVTQPLLKSSEINSRLDAVSEVLMSESS---- 457
Query: 479 ESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA 538
+L + T L + PD++RGI I+H+ + EF ++
Sbjct: 458 ----------------------VLIQIKTLLHKMPDVERGICSIYHKKCSTQEFFLIVST 495
Query: 539 ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAAD 598
L QL + +ALL++ +L S ++ K LS +N+EAA
Sbjct: 496 -------LSQLEASITALVPAIQTQVQAALLRKNLLEISD--LLSPVKKYLSILNEEAAK 546
Query: 599 QGDLLNLMIISNGQFSEVARARK-AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL 657
GD L + Q + R+RK +Q+ ++ + RK L +++VSG
Sbjct: 547 SGDKTQLF--KDLQDFPLIRSRKDEIQAVLYQIQMHLQDIRKILKCSFAGYVTVSGQEFQ 604
Query: 658 IELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
IE+ + F VP +W +V+STK R+H+P ++ L E+L + C A W FL +
Sbjct: 605 IEVKNSLVFSVPSDWIQVSSTKAVSRFHTPFIVENYRHLNQLREQLVLDCNAEWLRFLDD 664
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
F +Y AV LA +DC+ +LA +++ ++ RPV D +I I +G+HPV+D +
Sbjct: 665 FSDHYYSISKAVGHLATVDCIFSLAEVAKQGDYCRPVVKDGRS--EIMIKNGKHPVIDVL 722
Query: 776 L--LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
L + +VPNDT++ + + IITGPNMGGKS YI+QVALI +MAQ+GS+VPA +
Sbjct: 723 LGEQEQYVPNDTHIVCDGQRAMIITGPNMGGKSSYIKQVALITLMAQIGSYVPAEEVRVG 782
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
++DGI+TRMGA+D+I +G STF+EEL + + I+R T+ SLVI+DELGRGTSTHDG+AIA
Sbjct: 783 IVDGIFTRMGATDNIFKGHSTFMEELTDTADIIRKATSHSLVILDELGRGTSTHDGIAIA 842
Query: 894 YATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKS 949
YATL+Y + + LFVTHYP + +++ + VG YH+++L S + G D ++
Sbjct: 843 YATLEYFIRDVGSLTLFVTHYPPLCELERAYPRQVGNYHMAFLVNEDDSEQKRGMKDEEN 902
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ VT+LY++ V+ S+G VA+LA +P + +A + +LE
Sbjct: 903 PEFVTFLYQIKKEVAARSYGLNVAKLADVPEEILKKAAHKSKELE 947
>gi|157841276|ref|NP_001103184.1| DNA mismatch repair protein Msh3 [Danio rerio]
gi|123232732|emb|CAM16159.1| novel protein similar to vertebrate mutS homolog 3 (E. coli) (MSH3)
[Danio rerio]
Length = 1083
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 364/938 (38%), Positives = 538/938 (57%), Gaps = 97/938 (10%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q +E+K ++ D +L +E GYK+RFFGEDAE+AAK L I HLDHNFMTASIPT
Sbjct: 188 YTPLEEQYMEIKKQHVDTVLCVECGYKYRFFGEDAEIAAKELNITCHLDHNFMTASIPTH 247
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE----- 203
RL VHVRRLV+ G+KVGVVKQTET AIKA K+ F R L ALYTK+TL +
Sbjct: 248 RLFVHVRRLVSQGYKVGVVKQTETTAIKASSANKSSLFSRQLHALYTKSTLVGEDVNPLL 307
Query: 204 ---DVGGGEDGCGGE-SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
D+ ED +NYL+CV + K ++ +G+V V+ S GDV+
Sbjct: 308 KLGDLEQAEDVVQDSGNNYLMCVSESFDKQSK----------ELTVGMVVVQPSIGDVMV 357
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML----LAYAGPASNVRVECASRD 315
F D S LE+ +L + P E+L+ LS+ TE++L L+ +R+E
Sbjct: 358 DCFKDNMSHSELESRILRIQPVEILVPSDLSETTERLLRNIALSSVQADDRIRIEKRESA 417
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
F AL+ + Y N+E + + M + + L
Sbjct: 418 MFEYPTALSIIKDFYRGGPHSAARNHEKGSYSI------------CMGLESPIICCLGPV 465
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
I++L +F LE+I+ +SF+ LS + M LSA T++ LE+L N + GS G+LL +++H
Sbjct: 466 IQYLTEFKLEKILLCSSSFKRLSSDPDHMLLSAATMKNLEILCNQTTGSVKGSLLWVLDH 525
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T++G RLLR+WV+ PL I AR +AV+EI S S
Sbjct: 526 TQTLFGKRLLRKWVSQPLKSVIDIQARQEAVAEILSSESS-------------------- 565
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+L S+ + L R PD++RG+ I+H+ EF ++ ++ +LQ L
Sbjct: 566 ------VLPSIQSLLTRLPDLERGLCSIYHK----REFYLIISSLSRLNVELQALM---- 611
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
L S LLK L+L +P ++ A L +N++AA G+ M + F
Sbjct: 612 ---PAIQSQLSSPLLKTLLL--DTPQLLSPAHNFLKVLNEKAAKTGNKTE-MFVDLTDFP 665
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRN--LEFMSVSGITHLIELPANFK--VPLNW 670
+ + ++ ++S LD + + +L ++N L++ +VSG LIE+ + VP +W
Sbjct: 666 VIRKTKEEIESVL--LDIMEHRREVRLLLKNPSLDYTTVSGQQFLIEVKNSMLSIVPADW 723
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
K++STK RYH+P ++ +L E+L I C W +FL+ FG +Y + AV L
Sbjct: 724 VKISSTKVFGRYHTPFIVEKHRRLQQLREQLVIDCNHEWINFLQLFGDHYYILRKAVCHL 783
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLH 788
A +DCL +LA +++ N+ RP ++ E QI I +G+HPV+ +++ D +VPNDT+L
Sbjct: 784 ATMDCLFSLAQVAKENNYCRPEVLE--EKSQILITAGKHPVITSLMGDQDQYVPNDTHLQ 841
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ + IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA A + ++DGIY RMGASD+I
Sbjct: 842 GDGKRAMIITGPNMGGKSSYIRQVALVTIMAQLGSFVPAREASVGIVDGIYVRMGASDNI 901
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
+GRSTF+EEL E S +L T++SLVI+DELGRGTSTHDG+AIAYATL+ + +CM
Sbjct: 902 SRGRSTFMEELLETSDVLACATSRSLVILDELGRGTSTHDGIAIAYATLESFIREVRCMT 961
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD------VTYLYKVVPG 962
LFVTHYP + +++ + VG YH+++L + +S SD++ +T+LY+++ G
Sbjct: 962 LFVTHYPPLCELEHLYPQHVGNYHMAFL-----LNEPESTSDEEEAQPEFITFLYQLIEG 1016
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ S+G VA+LA++P S + A + +LEA V+SR
Sbjct: 1017 AAARSYGLNVARLAEIPESILRTAAFKSKELEALVNSR 1054
>gi|326668008|ref|XP_003198705.1| PREDICTED: DNA mismatch repair protein Msh3-like [Danio rerio]
Length = 1083
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 365/938 (38%), Positives = 537/938 (57%), Gaps = 97/938 (10%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q +E+K ++ D +L +E GYK+RFFGEDAE+AAK L I HLDHNFMTASIPT
Sbjct: 188 YTPLEEQYMEIKKQHVDTVLCVECGYKYRFFGEDAEIAAKELNITCHLDHNFMTASIPTH 247
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE----- 203
RL VHVRRLV+ G+KVGVVKQTET AIKA K+ F R L ALYTK+TL +
Sbjct: 248 RLFVHVRRLVSQGYKVGVVKQTETTAIKASSANKSSLFSRQLHALYTKSTLVGEDVNPLL 307
Query: 204 ---DVGGGEDGCGGE-SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
D+ ED +NYL+CV + K ++ +G+V V+ S GDV+
Sbjct: 308 KLGDLEQAEDVVQDSGNNYLMCVSESFDKQSK----------ELTVGMVVVQPSIGDVMV 357
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML----LAYAGPASNVRVECASRD 315
F D S LE+ +L + P E+L+ LS+ TE++L L+ +R+E
Sbjct: 358 DCFKDNTSHSALESRILRIQPVEILVPSDLSETTERLLRNIALSSVQADDRIRIEKRESA 417
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
F AL+ + Y N+E + + M + + L
Sbjct: 418 MFEYPTALSIIKDFYRGGPHSAAGNHE------------KGSYSLCMGLESPIICCLGPV 465
Query: 376 IRHLKQFGLERIMCLGASFRSLSG-SMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
I++L +F LE+I+ +SF+ LS S M LSA T++ LE+L N + GS G+LL +++H
Sbjct: 466 IQYLTEFKLEKILLCSSSFKRLSSDSDHMLLSAATMKNLEILCNQTTGSVKGSLLWVLDH 525
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T++G RLLR+WV+ PL I AR +AV+EI S S
Sbjct: 526 TQTLFGKRLLRKWVSQPLKSVIDIQARQEAVAEILSSESS-------------------- 565
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+L S+ + L R PD++RG+ I+H+ EF ++ ++ +LQ L
Sbjct: 566 ------VLPSIQSLLTRLPDLERGLCSIYHK----KEFYLIISSLSRLNVELQALM---- 611
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
L S LLK L+L +P ++ A L +N++AA G+ M + F
Sbjct: 612 ---PAIQSQLSSPLLKTLLL--DTPQLLSPAHNFLKVLNEKAAKTGNKTE-MFVDLTDFP 665
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRN--LEFMSVSGITHLIELPANFK--VPLNW 670
+ + ++ ++S LD + + +L ++N L++ +VSG LIE+ + VP +W
Sbjct: 666 VIRKTKEEIESVL--LDIMEHRREVRLLLKNPSLDYTTVSGQQFLIEVKNSMSSIVPADW 723
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
K++STK RYH+P ++ +L E+L I C W +FL+ FG +Y + AV L
Sbjct: 724 VKISSTKVFGRYHTPFIVEKHRRLQQLREQLVIDCNHEWINFLQLFGDHYYILRKAVCHL 783
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLH 788
A +DCL +LA +++ N+ RP ++ E QI I +G+HPV+ +++ D +VPNDT+L
Sbjct: 784 ATMDCLFSLAQVAKENNYCRPEVLE--EKSQILITAGKHPVITSLMGDQDQYVPNDTHLQ 841
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ + IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA A + ++DGIY RMGASD+I
Sbjct: 842 GDGKRAMIITGPNMGGKSSYIRQVALVTIMAQLGSFVPAREASVGIVDGIYVRMGASDNI 901
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
+GRSTF+EEL E S +L T++SLVI+DELGRGTSTHDG+AIAYATL+ + CM
Sbjct: 902 SRGRSTFMEELLETSDVLACATSRSLVILDELGRGTSTHDGIAIAYATLESFIREVGCMT 961
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD------VTYLYKVVPG 962
LFVTHYP + +++ + VG YH+++L + +S SD++ +T+LY+++ G
Sbjct: 962 LFVTHYPPLCELEHLYPQHVGNYHMAFL-----LNEPESTSDEEEAQPEFITFLYQLIEG 1016
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ S+G VA+LA++P S + A + +LEA V+SR
Sbjct: 1017 AAARSYGLNVARLAEIPESILRTAAFKSKELEALVNSR 1054
>gi|302799226|ref|XP_002981372.1| hypothetical protein SELMODRAFT_114371 [Selaginella moellendorffii]
gi|300150912|gb|EFJ17560.1| hypothetical protein SELMODRAFT_114371 [Selaginella moellendorffii]
Length = 696
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 353/752 (46%), Positives = 478/752 (63%), Gaps = 68/752 (9%)
Query: 220 VCVVDD-----DGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAV 274
+CVV++ N GK + V G FD R GVVAVE STGDV+YG F D R+ LE+
Sbjct: 1 MCVVEEAITEHKANAGK--DEVRG-SFDARFGVVAVETSTGDVMYGHFLDTVTRTELESR 57
Query: 275 LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMG 334
LL+ +PAELLL LS T+K+L+ YAG A++VRVE + F GG +A + Y ++
Sbjct: 58 LLACAPAELLLSASLSASTKKLLMDYAG-AADVRVEKTPENSFENGGTVAALADFYGSLA 116
Query: 335 ---EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLG 391
+ L D ++V ++ +M MP++ V A A +LKQF LE ++ LG
Sbjct: 117 SSKKGCLDEKVDAGLEVI------FYLQALMTMPEIVVAAFAHIFAYLKQFNLENVLRLG 170
Query: 392 ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHP 451
A FR +G EMTLS NT++QLE+L N ++G+E G L +MNHT T +G+RLL+ WVTHP
Sbjct: 171 ALFRPFAGQQEMTLSPNTIRQLEILHNQTDGTENGYLFWLMNHTKTAFGARLLKYWVTHP 230
Query: 452 LCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGR 511
L DR LIS RLDAV+EIAES+G +K T+ +S L LG+
Sbjct: 231 LRDRMLISQRLDAVAEIAESIG------------DKGRGTTVATL------ASTLLLLGK 272
Query: 512 SPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKR 571
PD++RGITRI+H+TAT EFI V+ AI+ A Q Q++ + SALL R
Sbjct: 273 LPDLERGITRIYHKTATTYEFINVINAIMKAASQFQRV------------RDARSALLSR 320
Query: 572 LILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELD 631
LI +S +VI A KL++++N EAA GD +NL + GQF EV ++ ++S +++L+
Sbjct: 321 LISAVTSTSVIDHANKLVTSLNAEAAAAGDKINLFV--AGQFPEVYECKETIKSIEKDLE 378
Query: 632 SLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTAL 691
S + R+ L NLE++SVSG + L+E+ + + NW K+NSTKK RYH PEVL A
Sbjct: 379 SFLPSYRELLKCSNLEYLSVSGTSFLVEVLSFSQ--FNWVKINSTKKANRYHPPEVLEAS 436
Query: 692 DQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRP 751
+++ALA E+L I C AWD FL +F Y+ EF+AAVQALAALDCL++LA +S N+ +VRP
Sbjct: 437 ERMALAKEQLNISCAKAWDMFLTDFTSYHMEFRAAVQALAALDCLYSLAVVSCNQGYVRP 496
Query: 752 VFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQ 811
FVD+ ++I HPVLD+ L D FVPNDT + E E QIITGP MGGKSCYI Q
Sbjct: 497 EFVDEACLLKIG-----HPVLDSTLQDAFVPNDTVVSGEGERSQIITGPKMGGKSCYIGQ 551
Query: 812 VALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTA 871
VALI IM+Q+G +VPA++A+LHV D ++TRMGA D IQ+G STF EEL+EAS IL T+
Sbjct: 552 VALITIMSQIGLYVPAATAKLHVFDAVFTRMGAMDRIQRGSSTFFEELSEASTILHKATS 611
Query: 872 QSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTY 931
+SLV++DELGRGTSTHDG+ IAYA L +LL+ THY + ++ F V Y
Sbjct: 612 RSLVVIDELGRGTSTHDGITIAYAMLHHLLQEVH------THYLNVTEVVKLFPSQVQAY 665
Query: 932 HVSYLTSHKVMGPMDSKSDQD----VTYLYKV 959
H+SYL + G +D S Q+ VT+LYK+
Sbjct: 666 HMSYLV-ESLEGDLDKSSVQEVVQKVTFLYKL 696
>gi|320166046|gb|EFW42945.1| DNA mismatch repair protein Msh3 [Capsaspora owczarzaki ATCC 30864]
Length = 1139
Score = 593 bits (1530), Expect = e-166, Method: Compositional matrix adjust.
Identities = 356/957 (37%), Positives = 538/957 (56%), Gaps = 88/957 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
+T LEQQ +++K ++PD +L +E GYKFRFFG+DAE+AAK L I HNFMTASIPT
Sbjct: 230 FTQLEQQYIDVKVQHPDAVLFVECGYKFRFFGDDAEIAAKELSIGCFPSHNFMTASIPTH 289
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
RL VHV+RLVN G+KVGVV+QTETAA+KA G K+ PF R L+ LYT+ATL +D+
Sbjct: 290 RLPVHVKRLVNLGYKVGVVRQTETAALKAAGDNKSAPFDRKLTGLYTRATL-IGDDIEAE 348
Query: 209 EDGC---GGESNYLVCVVDDDGNVGKIRNGVFGDGFDV----RLGVVAVEISTGDVVYGE 261
D G S+YL+ + + + R+ +VAV STGD++Y E
Sbjct: 349 NDSAEDETGSSHYLMSIFELVAADNSALAAAERHSSPLTPATRIAIVAVRPSTGDIIYDE 408
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
F+DG RS LE L L P EL+L LS +TE+++ A A GGG
Sbjct: 409 FSDGLTRSELETRLAHLRPTELILPMQLSTRTEQLIAALA----------------YGGG 452
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ +L E G+ T + + +A+ ++N+ V+ +R+L
Sbjct: 453 --RKHATLMEIDGQATSTTDG------------AAALNLVLNLSQGIVRCFGALLRYLSD 498
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
FGL++++ L ++ M L+ TL LEV RN ++G GTL ++NHT+T +G
Sbjct: 499 FGLDQVLLLTSNLHHFHQRNHMLLNGLTLSNLEVFRNETDGGSTGTLFALLNHTVTPFGR 558
Query: 442 RLLRRWVTHPLCDRNL--------ISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
RLLR W+ PL DR L S L + S ++ + ++
Sbjct: 559 RLLRTWIAQPLLDRRLGDSFAKCTCSLLLRFFPPPRSHLHVLFLSSAILNRQDAIEELLT 618
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
E + +L S+G D+ +G+ RI+++ +PSEF+ ++ A + G
Sbjct: 619 SEAPMFAKTKKMLQSVG---DLDKGLCRIYYQKCSPSEFLMLLHAF---------NRMSG 666
Query: 554 EYR---------EKVTSK----TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG 600
E+R E +++ +H+ LLK++ S+ + A+ ++ ++ + A +
Sbjct: 667 EFRFWCPPEGTGEVFSTRHSLSRVHAVLLKQIC--ESNIQISDTIAEFVTRLDSKGAKEK 724
Query: 601 DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL 660
+L + S S V R + A+ + +L + RK LG +LE+++V +LI++
Sbjct: 725 HKRSLFVPSQEPRS-VTRGKLAIAEVEAQLQQHLREVRKLLGTPSLEYLTVLTEEYLIDV 783
Query: 661 --PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG 718
P+ VP +W K++ TK T+R+HSP V T L +L E+L C AW L EF
Sbjct: 784 KKPSLKLVPRDWLKMSETKATVRFHSPVVATKLRELNQLREQLDTDCERAWAGMLSEFAQ 843
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
+Y F+ V LA LDCL+ALA +++ N+VRPV + + I + GRHP++D +L
Sbjct: 844 HYDTFRKVVDRLAQLDCLYALAEVAKLDNYVRPV-ISTEDVALIDVKQGRHPMVDVLLSG 902
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
FVPND +LH C+I+TGPNMGGKSCYIRQVAL+ I+AQ+GS+VPA SA + ++D I
Sbjct: 903 QFVPNDVHLHQPSLRCRIVTGPNMGGKSCYIRQVALLAILAQIGSWVPAESARIGIIDAI 962
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
TRMGA+D IQ+G STF+ E+ E S IL++ T +SLVI+DELGRGTST DG+AIA+ATLD
Sbjct: 963 CTRMGAADHIQRGFSTFMVEMQETSRILKDATNRSLVILDELGRGTSTFDGLAIAHATLD 1022
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS-HKVMGPMD----SKSD--Q 951
YL+ K + LFVTHYP + + + + V +H++++ + H P D S+SD Q
Sbjct: 1023 YLIAESKPLTLFVTHYPALGEFASTYPRHVSNHHMAFVDNGHTDEEPEDANPPSESDDIQ 1082
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
+ +LY++ GV+ S+G VA+LA LP ++ +A++ AE+ ++ RSA +
Sbjct: 1083 SIAFLYQLANGVAHRSYGLNVARLAGLPHDVLA----LASRKSAELEKLIKQRSAAK 1135
>gi|363744798|ref|XP_003643127.1| PREDICTED: DNA mismatch repair protein Msh3-like [Gallus gallus]
Length = 1090
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 354/935 (37%), Positives = 531/935 (56%), Gaps = 84/935 (8%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K +Y D +L +E GYK+RFFGEDAE+A+K L I H DHNFMTASIPT
Sbjct: 181 YTPLELQFIEMKKRYKDAILCVECGYKYRFFGEDAEIASKELNICCHQDHNFMTASIPTH 240
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG-- 206
RL VHVRRLV G KVGV+KQ ETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 241 RLFVHVRRLVAKGHKVGVIKQMETAALKAAGENKSSLFSRKLTALYTKSTL-IGEDVNPL 299
Query: 207 -GGEDGCGGES-------NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+D E NYL+C+ ++ NV + G D+ +GV+A++ +TG+VV
Sbjct: 300 LKLDDSVDVEEVTTDVPDNYLLCICENGENVKNRKKG------DIVIGVMAIQPTTGEVV 353
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG---PASNVRVECASRD 315
+ F D R LE+ LL L P EL+L LS Q+EK++ + +RVE
Sbjct: 354 FDSFGDCASRLELESRLLRLQPVELILPSSLSDQSEKLINSVTSMRLRDDRIRVERMKNY 413
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE-QGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y +VP+ G + ++ I+++ + ALA
Sbjct: 414 HFEYSNAFQLVTDFYAK--------------EVPDITGPQKLSV--ILSLDKPVICALAA 457
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
I +LK+F LE+++ ++F+ LS E MT++ T++ LE+L+N ++ G+LL +++
Sbjct: 458 VITYLKEFNLEKMLYNPSNFKQLSSETEYMTINGTTMKNLEILQNQTDLKTKGSLLWVLD 517
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L++WV PL + I+ARLDAVSEI S S
Sbjct: 518 HTKTSFGRRRLKKWVIQPLMKCSEINARLDAVSEILLSESS------------------- 558
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PD++RG+ +FH+ + EF ++ + ++Q L
Sbjct: 559 -------VFGQIQNLLCKLPDLERGLCSVFHKKCSTQEFFLIVSTLSRLDSEIQAL---- 607
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
V + S LL+ +L P ++ L +N+EAA GD L F
Sbjct: 608 ---VPVIHSHVKSPLLQNALLEI--PELLSPVKHYLKILNEEAAKTGDKTQLFK-DLTDF 661
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWA 671
+ + ++ + ++ + RKQ+ + E+++VSG L+E+ + VP NW
Sbjct: 662 PVIRKKKEEILDVLSKIQLHLLEIRKQIKNPSAEYVTVSGQEFLVEVKNSHISSVPSNWV 721
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
V+STK R+HSP + L E+L + C A W FL F +Y A+ LA
Sbjct: 722 MVSSTKAVSRFHSPFITENYRHLNQLREQLVLDCGAEWLRFLDHFSEHYHTVSKAIGHLA 781
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHA 789
+DCL +LA ++ ++ RPV D+ + +I I +GRHPV+D +L D +VPN TNL
Sbjct: 782 TIDCLFSLAQAAKQGDYCRPVVKDNQQ--EIIIKNGRHPVIDVLLGEQDQYVPNTTNLSR 839
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNMGGKS YI+QVALI +MAQ+GS+VPA + + ++DGI+TRMGA+D+I
Sbjct: 840 DGERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEESTVGIVDGIFTRMGAADNIY 899
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF+EEL + + I+R T++SLVI+DELGRGTSTHDG+AIAYATL++ + + + L
Sbjct: 900 KGRSTFMEELTDTAEIIRRATSRSLVILDELGRGTSTHDGIAIAYATLEHFITDVESLTL 959
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
FVTHYP + +++ + G VG YH+++L S + G + ++ + VT+LY++ GV+
Sbjct: 960 FVTHYPSVCELENVYPGKVGNYHMAFLVNKEESAEQKGSEEEENPEFVTFLYQITKGVTA 1019
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA +P + +A + +LE V+ +
Sbjct: 1020 RSYGLNVAKLADIPEEILKKAAHKSKELERLVNVK 1054
>gi|432873486|ref|XP_004072240.1| PREDICTED: DNA mismatch repair protein Msh3-like [Oryzias latipes]
Length = 1090
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 381/971 (39%), Positives = 543/971 (55%), Gaps = 92/971 (9%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
K K +L P + P+ S++T YTP+EQQV++LK + D LL +E GYK+RFFG
Sbjct: 168 KGEKGAELGPLSGPCAPSKGSKSTST--YTPMEQQVIQLKQQQKDALLAVECGYKYRFFG 225
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
+DAE+AAK L I HLDHNFMT SIP+ RL VHVRRLV+ G KVGVVKQTETAAIKA G
Sbjct: 226 DDAEIAAKELNITCHLDHNFMTCSIPSHRLFVHVRRLVSHGHKVGVVKQTETAAIKASGA 285
Query: 181 GKAGPFGRGLSALYTKATLE--------AAEDVGGGEDG---CGGESNYLVCVVDDDGNV 229
+ F R LSALYTK+TL + EDV G G ++L+C+ + N
Sbjct: 286 NRNALFTRQLSALYTKSTLVGEDVNQICSLEDVDEGSHGDVMVDPPDSFLLCISE---NW 342
Query: 230 GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPL 289
K+R + +G+VAV+ STGDV F DG RS LE+ +L ++P E+L+ L
Sbjct: 343 DKLRK-------QLTVGLVAVQPSTGDVFLDCFPDGSSRSELESRILKINPVEILVPSDL 395
Query: 290 SKQTEKMLLAYAGPA----SNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQN 345
S++T ++LL+ + RVE F A+ V Y S ED
Sbjct: 396 SEETCRLLLSVTNGSFQADDRARVERRDSAQFEYTSAINTVTQFY------CRSQQEDSR 449
Query: 346 MDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MT 404
++ + + + L I++L++F LER++ +SF+ LS E M
Sbjct: 450 -----------SLWRVASFESPVICCLGPLIQYLQEFNLERVLRSESSFQRLSCESEAMI 498
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L+A TL+ LE+L N ++ G+L +++H+ T +G RL+R+WV+ PL D IS R DA
Sbjct: 499 LNAATLRNLEILNNQTDRGVRGSLFWVLDHSRTPFGRRLMRKWVSQPLTDLQRISERQDA 558
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
V EI ES IL SV + L R PD++RGI I+H
Sbjct: 559 VQEIMESDSP--------------------------ILDSVKSLLPRLPDLERGICSIYH 592
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
+ ++ EF + + G QLQ + + S+T S LL+ ++L +P ++
Sbjct: 593 KKSSTQEFYLISSHLSRLGLQLQS------WIPAIRSQT-RSVLLRSVLL--DTPDLLAP 643
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
A L+ +N++AA G+ L +G F + K + E+ + R L
Sbjct: 644 AHTFLNVLNEKAARSGNKTELFSDLSG-FPVLQERTKQIHFVLSEIQEHLKDIRMVLKAP 702
Query: 645 NLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
L +++VSG LIE+ + VP +W K++STK RYHSP ++ +L E+L
Sbjct: 703 TLNYITVSGQEFLIEVKNSLSSTVPSDWVKISSTKAVGRYHSPLLVERYKKLQQLREQLL 762
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQI 762
+ C+ W FL +FG +Y + A+ LA +DCL +LA +++ + RP +D QI
Sbjct: 763 LDCQREWTDFLDQFGEHYHTMKRAISHLATIDCLFSLAEVAQQGGYCRPKVCEDQP--QI 820
Query: 763 HICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
I GRHP +D ++ + FVPN T+L + + IITGPNMGGKS YIRQVALI IMAQ
Sbjct: 821 MIRDGRHPAIDLLMGEQNQFVPNHTDLQGDGKRTMIITGPNMGGKSSYIRQVALICIMAQ 880
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+GSFVPAS A L +LDGIYTRMGASD+I +GRSTF+EEL EAS I+ T +SLVI+DEL
Sbjct: 881 IGSFVPASEACLGLLDGIYTRMGASDNIYKGRSTFMEELTEASEIISRATERSLVILDEL 940
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTSTHDG+AIAYATL+Y + H K LFVTHYP + +++ + V +H+++L +
Sbjct: 941 GRGTSTHDGIAIAYATLEYFIRHVKSFTLFVTHYPPLCELERMYPDHVSNFHMAFLLNET 1000
Query: 941 VMGPMDSKSD---QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEV 997
+ D + +T+LY + G + S+G VA+LA +P + A A +LE+ V
Sbjct: 1001 HISSDTKDGDVQPEFITFLYNLTEGAAGQSYGLNVAKLADVPDPILCTAARKAQELESAV 1060
Query: 998 SSRVQNRSAKR 1008
+R RS KR
Sbjct: 1061 EAR--RRSKKR 1069
>gi|440795835|gb|ELR16949.1| MutS domain V domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1281
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 356/936 (38%), Positives = 534/936 (57%), Gaps = 99/936 (10%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
KYTPLEQQ V +K K PDVLL++E GY+ RFFGEDAE+A+KVL I HNFM ASIPT
Sbjct: 351 KYTPLEQQFVAVKEKNPDVLLIVECGYRCRFFGEDAEIASKVLHIACFQAHNFMNASIPT 410
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT-----LEAA 202
RL++H + + G+KVG+VKQTETAAIKA G K+GPF R LSA+YTKAT +E
Sbjct: 411 NRLHIHTK---HQGYKVGLVKQTETAAIKAAGATKSGPFARELSAIYTKATYIPEDVETI 467
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD-VRLGVVAVEISTGDVVYGE 261
VGG NYL+C+ + + D D V ++A+++STGD+VY +
Sbjct: 468 ATVGG----TASSPNYLMCLYEQ----------LNEDNTDSVHFSILAIQLSTGDIVYDD 513
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
F+D F R LE +L L PAEL+L Q L+ QT ++L +R C
Sbjct: 514 FDDDFAREALETRILHLQPAELILQQTLTPQTTRLL---------------NRLC-PSEA 557
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPE----QGNHRSAIEGIM-----NMPDLAVQAL 372
L +L EN+ ED L + + E + R ++ G+ +P+ V L
Sbjct: 558 TLGINKTLVENL-EDYLWDYDSAIGTAMEFYAVSPSKRPSLHGVKFGSGEALPNGVVICL 616
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
++ I L++ LE ++ L ++FR + + M++S T LE N NG G+L +M
Sbjct: 617 SMMIGRLEKCQLEDVLRLTSNFRHFTRASTMSVSGITATNLEFFNNQDNGHYKGSLYWLM 676
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
NHT T +G+RLLR+W+ PL ++ I RLDAV+E+ E+
Sbjct: 677 NHTQTAFGARLLRKWLQQPLLEKKFIDERLDAVAELMETSA------------------- 717
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
P +L V+ +L PD++RG+ + ++ +P F++++Q+ K++ +
Sbjct: 718 ---PAIKLMLD-VVKAL---PDLERGLVQCHYKRCSPQAFLSLLQSF----KKVSKCAPP 766
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
E+ TL +LL P + L+ ++ +AA G L + S+ Q
Sbjct: 767 RAALEQQVKSTLLRSLL-------HYPDMCDDVDYFLNAMSTKAAQTGKKRKLFVDSD-Q 818
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNW 670
F EVA+ +++ K++L + R +L M +L++++ S +LIEL A K +P +W
Sbjct: 819 FPEVAKYHSEIENVKKKLHDHLAEVRDELNMPSLDYVTRSNAKYLIELTLAKAKSIPKDW 878
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
VN T K RY +P+++ + ++AL E+LTI AWD+FL EF Y F ++ L
Sbjct: 879 VLVNGTTKLGRYQTPKIVGLMQKMALNKEKLTIAAEQAWDAFLGEFKAKYDVFHEVMRKL 938
Query: 731 AALDCLHALATLSRNK-NFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHA 789
ALDCL +LA L++ + +VRP+ DD E ++ I GRHPV++ ++ D FVPN ++ +
Sbjct: 939 GALDCLDSLAALAKGRPGYVRPIICDD-EHRKLEIVDGRHPVVEALMTDPFVPNAISMRS 997
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ + C ++TGPNMGGK+ YI+QVALI MAQ+GSFVPA SA L +D I+TRMGASD+++
Sbjct: 998 DAQRCMVLTGPNMGGKTSYIKQVALIVAMAQIGSFVPAESACLSPVDAIHTRMGASDNLE 1057
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+G+STF EL E S IL+ T +SLVI+DELGRGTSTHDGVAIAYATLD+ + +C +
Sbjct: 1058 RGQSTFYVELQETSSILQKATDRSLVILDELGRGTSTHDGVAIAYATLDHTIRSIRCFTI 1117
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
FVTHYP +A ++ + VG YH++++ K D + +T+LYK+ G ++ S+G
Sbjct: 1118 FVTHYPLLAQLEEVYPSVVGNYHMAFMEHEKERKEDDPST--TITFLYKLTEGAAKKSYG 1175
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRS 1005
LP I+ A+ + +LE V + + R+
Sbjct: 1176 L------NLPSEVIAVASKKSHELEESVKQKAERRN 1205
>gi|301626456|ref|XP_002942407.1| PREDICTED: DNA mismatch repair protein Msh3-like [Xenopus
(Silurana) tropicalis]
Length = 1016
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 341/929 (36%), Positives = 528/929 (56%), Gaps = 83/929 (8%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q +E+K+ + D +L +E GYK+RFFGEDAE+A++ L IY H+DHNFMTASIP
Sbjct: 115 YTPLEEQYMEIKSHHTDAILCVECGYKYRFFGEDAEIASRELNIYCHMDHNFMTASIPAH 174
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG-- 206
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 175 RLFVHVRRLVAKGYKVGVVKQTETAALKAAGESKSSLFTRQLTALYTKSTL-IGEDVSPL 233
Query: 207 -GGEDGCGGE-------SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+D E S+YL+C+ + N+ + +N D G+VAV+ STG+V+
Sbjct: 234 INIDDSLEVECIMADVPSSYLLCIFE---NIDRTKNKKSADAV---FGLVAVQPSTGEVM 287
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA----SNVRVECASR 314
Y F+D R+ LE +L L P E+LL +S TE+++ + + +R+E +
Sbjct: 288 YDRFHDTKSRTELETRILRLQPVEILLPSDISDCTERLISSLTSASLRDDDRIRIERMDK 347
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A + Y ++Q++ Q + I+ + +LA
Sbjct: 348 SHFEYSQAFQLISEFY----------GQEQHISAGSQ-----KLTEILTFDKSVICSLAA 392
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
TI++LK+F LE+I+ ++F +S E + ++ TL+ LE+L+N ++ G+L+ +++
Sbjct: 393 TIKYLKEFHLEKILYNSSNFTQMSSKNECLRMNGTTLKNLEILQNQTDLKTKGSLIWVLD 452
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R +++WVT PL + I+ARL+AVSE+ S S
Sbjct: 453 HTRTCFGRRKIKQWVTQPLVNTREINARLEAVSEVLLSDSS------------------- 493
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + V + L + PD++RG+ I+H+ + EF ++ + ++ L
Sbjct: 494 -------VFTQVRSHLSKLPDLERGVCSIYHKKCSTQEFFLIVSTLCNISNNMEALI--- 543
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ S LL+ + A P ++ K L+ +N+ AA G+ L F
Sbjct: 544 ----PAIKSQVKSPLLQTIF--AEIPQMLEPMHKFLNVLNESAARTGNKTELFK-DLTDF 596
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWA 671
+++ + +Q +L++ + RK L + SV G LIE+ + VP +W
Sbjct: 597 PKISARKLEIQEMLLKLEAHLGDIRKILKNPAASYTSVYGQEFLIEVKNSLGSVVPPDWI 656
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
V+STK R+HSP ++ L E+L + C W FL +FG Y ++ LA
Sbjct: 657 TVSSTKAVSRFHSPFIVENYRHLNQLREKLVLDCNTEWLHFLDKFGENYHSVCKSINHLA 716
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNLHA 789
DC+ +LA +++ + RP D +I I +GRHPV+D +L + FVPN T+L A
Sbjct: 717 TADCIFSLAEVAKQDGYCRPAVHDSGS--EIIIKNGRHPVIDLLLEEQSQFVPNSTSLMA 774
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
++E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA + + ++DGI+TRMGA+D+I
Sbjct: 775 DKERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEAVTVGIVDGIFTRMGAADNIY 834
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF++EL + + IL+N T +SLVI+DELGRGTSTHDG+AIAY+TL+Y+++ + L
Sbjct: 835 KGRSTFMDELLDTAEILKNATPRSLVILDELGRGTSTHDGIAIAYSTLEYIIKSVTSLTL 894
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV---MGPMDS-KSDQDVTYLYKVVPGVSE 965
FVTHYP + +++ + VG YH+++ + G +S + Q VT+LY++ G++
Sbjct: 895 FVTHYPSLCELEKAYAEQVGNYHMAFFVDEEEDTDSGLSESLQQPQHVTFLYQITQGIAA 954
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLE 994
S+G VA+LA +P S ++RA + LE
Sbjct: 955 RSYGLNVAKLADIPHSVVTRAACKSKALE 983
>gi|134080992|emb|CAK41506.1| unnamed protein product [Aspergillus niger]
Length = 1104
Score = 583 bits (1504), Expect = e-163, Method: Compositional matrix adjust.
Identities = 336/928 (36%), Positives = 533/928 (57%), Gaps = 76/928 (8%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP+E+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L I +HLD F +ASIP
Sbjct: 206 KLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVSHLD-RFASASIPV 264
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT-LEAAEDVG 206
RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ LYTK T ++ AE +G
Sbjct: 265 HRLHVHVKRLVAAGHKVGVVRQIETAALKAAGDNRNAPFVRKLTNLYTKGTYIDDAEGLG 324
Query: 207 G----GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
G G + YL+C+ + + +G+ V++G+VAV+ +TGD+VY +F
Sbjct: 325 GPMPAASGGASPATGYLLCITETNAKG-------WGNDEKVQVGIVAVQPATGDIVYDDF 377
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-----RVECASRDCF 317
DGF+RS +E LL ++P ELL+ LSK TEK++ +G NV RVE +
Sbjct: 378 EDGFMRSEIETRLLHIAPCELLIVGELSKATEKLVQHLSGSKLNVFGDKTRVERVLKSKT 437
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
+ + V S Y + + ++ Q + ++ ++N+P+ L+ I
Sbjct: 438 AAAESHSHVSSFYAGKMKTASAADDAQASSL---------LQKVLNLPEQVTICLSSMIE 488
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
H+K++GLE + L F+ S M L+ NTL LE+ +N ++ + G+L ++ T T
Sbjct: 489 HMKEYGLEYVFELTKYFQHFSSRSHMLLNGNTLMSLEIYQNQTDHTTKGSLFWTLDRTQT 548
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
+G R+LR+WV PL D++ + R++AV E+ KN + T++ +
Sbjct: 549 RFGQRMLRKWVGRPLLDKSRLEERVNAVEEL------------------KNPEKTVMVER 590
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+L V D+++ + RI++ T E + V+Q + ++ + +
Sbjct: 591 LKGLLGKV------KSDLEKSLIRIYYGKCTRPELLTVLQTMQMIAQEFSDVKSPADT-- 642
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
S ++ A+ P ++ L +N AA D + + +++
Sbjct: 643 GFASTAINEAI-------TCLPTILEDVVAFLDKINMHAAKSDDKYAFFREAE-ETEDIS 694
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL---PANFK-VPLNWAKV 673
+ + S + EL+ ++ ++LG + +E+ SV+GI +LIE+ A+ K VP +W KV
Sbjct: 695 DQKLGIASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVENSSASIKRVPASWVKV 754
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ TKK R+H+PEV+ + Q E L C A+ S L + Y F+ +VQALA L
Sbjct: 755 SGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIATKYQPFRDSVQALATL 814
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
DCL ALAT++ +V+P + D H +Q+ GRHP+++ +LLD++VPND +L +++
Sbjct: 815 DCLIALATIASQPGYVKPEYTD-HTCIQVD--QGRHPMVEQLLLDSYVPNDIDLDSDKTR 871
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA+L +LD ++TRMGA D++ G S
Sbjct: 872 ALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLDAVFTRMGAFDNMLAGES 931
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY++ + + LF+TH
Sbjct: 932 TFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRSIRSLTLFITH 991
Query: 914 YPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
Y ++ + F + H+ + S + +D+++T+LY+V GV+ S+G V
Sbjct: 992 YQHLSSMVHSFADQELRNVHMRFTES-------GTGTDEEITFLYEVGEGVAHRSYGLNV 1044
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSR 1000
A+LA LP + + +A + +LE ++ R
Sbjct: 1045 ARLANLPGALLDQARQKSKELEEKIRRR 1072
>gi|407921660|gb|EKG14801.1| hypothetical protein MPH_08076 [Macrophomina phaseolina MS6]
Length = 1135
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 340/944 (36%), Positives = 522/944 (55%), Gaps = 86/944 (9%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+Q+++LK +PD +L++EVGYKFRFFGEDA +AAK LGI
Sbjct: 242 KLTPMERQIIDLKQSHPDTILVVEVGYKFRFFGEDARVAAKELGIVCIPGKFRFDEHLSE 301
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHLD F AS PT RL+VHV+RLV AG KVGVV+Q ETAA+K G + PF R L+ L
Sbjct: 302 AHLD-RFAGASFPTHRLHVHVKRLVAAGHKVGVVRQLETAALKKAGDNRNAPFVRKLTNL 360
Query: 194 YTKAT----LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
YTKAT +E E G + Y++C+ + + +G V +GVVA
Sbjct: 361 YTKATYIDDVEGLEGAGANASSNSPATGYILCLTESNAKG-------WGTDEKVHIGVVA 413
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-- 307
V+ +TGD++Y +F DGF+RS +E LL ++P+E L+ +SK TEK++ +G NV
Sbjct: 414 VQPATGDIIYDDFEDGFMRSEIETRLLHIAPSEFLIVGDVSKATEKIVHHLSGSKRNVFG 473
Query: 308 ---RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
RVE + + A + + + Y + + ++E + ++ + +
Sbjct: 474 DQARVERVEKPKTMAAQAYSHISNFYADKMKSADEHSESAA----------TVLDKVHAL 523
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
+ L+ I H+ ++GLE + L +F++ S M L+ NTL LE+ +N ++ +
Sbjct: 524 SEHVTICLSALITHMTEYGLEHVFDLTKNFQAFSARSHMMLNGNTLSSLEIYQNQTDHTV 583
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L M+ T T +G RLLR+WV PL ++ + R+ AV E+
Sbjct: 584 KGSLFWTMDRTKTRFGQRLLRKWVGRPLLNKEKLEERIGAVEEL---------------- 627
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+N D +V + +LS V T D+++ + RI+++ T E +AV+Q +
Sbjct: 628 --RNGDKVVVLEKLKRLLSQVKT------DLEKSLIRIYYQKCTRPELLAVLQTLQRIAS 679
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+ H+ + +S L A+ AS P + L +N +AA D
Sbjct: 680 EYA--HVTSPEKAGFSSPILQEAI-------ASLPLISKDVVGFLDRINLQAAKDDDKYT 730
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN- 663
+ + ++ + + S + +L K+LG +++++ SGI LIE+P
Sbjct: 731 FFREEH-ETEDITDHKMGIVSVEHDLKEHKKEIAKKLGKSKIDYVTKSGIEFLIEVPNAE 789
Query: 664 -FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
KVP +WAK++ TK+ R+H+PEV+ L + E L C A+ L E G Y
Sbjct: 790 VKKVPASWAKISGTKQVSRFHTPEVIRLLRERDQHKEALAAACDVAFKDLLVEIGTKYQP 849
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVP 782
F+ VQ+LA LDCL +LA +S +V+P + DD V+I + GRHP+++ +LL+ +VP
Sbjct: 850 FRDCVQSLATLDCLLSLAEISNQPGYVKPAYTDD---VRIDVSGGRHPMVEQLLLEAYVP 906
Query: 783 NDTNLHAERE----YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
NDT+L + +ITGPNMGGKS ++RQVALI IMAQVGS+VPASSA L +LD +
Sbjct: 907 NDTHLSSTSSSGTPRALLITGPNMGGKSSFVRQVALICIMAQVGSYVPASSATLGMLDAV 966
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA+A LD
Sbjct: 967 LTRMGAFDNMMAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAHAVLD 1026
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKS-DQDVTYL 956
Y++ + + LF+THY +A + F G++ H+ + + K +++T+L
Sbjct: 1027 YVVRDLRALTLFITHYQNLARLADAFPDGALRNVHMRFEEKEGGGAGRNKKGVGEEITFL 1086
Query: 957 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
Y+V GV+ S+G VA+LA +P + + A V +A+LE E+ R
Sbjct: 1087 YEVGEGVAHRSYGLNVARLANVPDAVLEVAAVKSAELEEEMRRR 1130
>gi|378725732|gb|EHY52191.1| DNA mismatch repair protein msh3 [Exophiala dermatitidis NIH/UT8656]
Length = 1108
Score = 577 bits (1488), Expect = e-161, Method: Compositional matrix adjust.
Identities = 350/975 (35%), Positives = 531/975 (54%), Gaps = 100/975 (10%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+QV+E+K + D LL++EVGYKFRFFGEDA +AA+ LGI
Sbjct: 189 KLTPMEKQVIEIKKAHMDTLLVVEVGYKFRFFGEDARIAARELGIVCIPGKYRFDEHPSE 248
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHLD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ L
Sbjct: 249 AHLDR-FASASIPVHRLHVHVKRLVAAGHKVGVVRQLETAALKAVGDNRNAPFVRKLTNL 307
Query: 194 YTKATLEAAEDVGGGEDGCGGE-------SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLG 246
YTK T +D+ G ED G + +L+C+ +++ +G+ V +G
Sbjct: 308 YTKGTY--IDDIEGIEDNGRGSPTPQSPSTGFLLCMTEEN-------TKGYGNDEKVHVG 358
Query: 247 VVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN 306
+VAV+ +TGD++Y +F DGF+R +E LL ++P E L+ LS+ TEK+++ +G +N
Sbjct: 359 LVAVQPATGDIIYDDFEDGFMRGEIETRLLHIAPCEFLIVGELSRATEKLVMHLSGSKTN 418
Query: 307 V-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI 361
V RVE + + A + S Y + +++ +++E + I
Sbjct: 419 VFGDKIRVERTPKPKTMAAQAHGHISSFYADKLKESPADHEKAT----------KVFDKI 468
Query: 362 MNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSN 421
+ +P+ L+ I HL +GLE + L F+ S M L++NTL LE+ +N ++
Sbjct: 469 LGLPENVSICLSAMIDHLSDYGLEHVFQLTKYFQPFSARSHMLLNSNTLTSLEIYQNQTD 528
Query: 422 GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESV 481
S G+L +M+ T T +G RLLR+WV PL DR I RL AV E+ +
Sbjct: 529 HSTKGSLYWMMDRTQTRFGGRLLRKWVGRPLLDRQGIEERLAAVEELLDP---------- 578
Query: 482 GQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY 541
+ T VE + + LS + T D+++ + RI++ T E + V+QA+ +
Sbjct: 579 -------AKATYVE-KLRHALSRLKT------DLEKSLIRIYYGKCTRPELLNVLQALQF 624
Query: 542 AGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
+ Y S S L+ + P+V+ + L +N +AA D
Sbjct: 625 LANEFA-------YVTDAASTNFSSELISSAMTPL--PSVLTEVVGYLDKINLQAAKSDD 675
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM-RNLEFMSVSGITHLIEL 660
N + + + + + + +LD + ++LG R +E+ +V+GI +L+E+
Sbjct: 676 KYNFFQ-EGAENDTITEHKFGIAAVEHDLDEFRAIAAEKLGKKRPVEYATVAGIDYLVEV 734
Query: 661 PANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF 716
N KVP +W K++ TKK R+H+PEV+ L + E L C A+ L +
Sbjct: 735 DNNSAMIKKVPASWTKISGTKKISRFHAPEVVKLLRERDQHKESLAAACDKAYKDLLADI 794
Query: 717 GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL 776
Y F+ VQ LA LDCL +LA ++ +VRP F E + + GRHP+++ +L
Sbjct: 795 STKYQLFRDTVQNLARLDCLLSLANVASQPGYVRPRFT---EGTVVEVEGGRHPMVEQLL 851
Query: 777 LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
+D +VPND ++ + ++TGPNMGGKS Y+R VALI IMAQ+GSFVPA+SA L +LD
Sbjct: 852 IDTYVPNDISISRDTTRALLVTGPNMGGKSSYVRSVALISIMAQIGSFVPATSATLGILD 911
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
++TRMGA D++ G STF+ EL+E S IL+ T +SLV++DELGRGTSTHDGVAIA +
Sbjct: 912 AVFTRMGARDNMMSGESTFMVELSETSDILKLATDRSLVVLDELGRGTSTHDGVAIAASV 971
Query: 897 LDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
LDYL+ +KC+ LF+THY +A + F G + H+ + D++V +
Sbjct: 972 LDYLVRDRKCLTLFITHYQMLARMANGFPNGELKNVHMRFR----------EDDDENVAF 1021
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLS 1015
LY+V GV+ S+G VA+LA + S I A +A+LE E +R Q + R LL S
Sbjct: 1022 LYEVAEGVAHRSYGLNVARLANISESVIDVARQKSAELETETKAR-QLSALARMLLAADS 1080
Query: 1016 DQEQEAQENMPVSPE 1030
+ A + + PE
Sbjct: 1081 NGGTGAGHSSKLDPE 1095
>gi|302799222|ref|XP_002981370.1| hypothetical protein SELMODRAFT_420792 [Selaginella moellendorffii]
gi|300150910|gb|EFJ17558.1| hypothetical protein SELMODRAFT_420792 [Selaginella moellendorffii]
Length = 662
Score = 577 bits (1488), Expect = e-161, Method: Compositional matrix adjust.
Identities = 333/704 (47%), Positives = 447/704 (63%), Gaps = 67/704 (9%)
Query: 220 VCVVDD-----DGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAV 274
+CVV++ GN GK + V G FD R GVVAVE STGDV+YG F D R+ LE+
Sbjct: 1 MCVVEEAITEHKGNAGK--DEVRGS-FDARFGVVAVETSTGDVMYGHFMDTVTRTELESR 57
Query: 275 LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMG 334
LL+ +PAEL L LS T+K+L+ YAG A++VR E + F GG +A + Y ++
Sbjct: 58 LLACAPAELFLSASLSTSTKKLLMDYAG-AADVRAEKTPENSFENGGTVAALADFYGSLA 116
Query: 335 EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
D+ +D + +E +M MP++ V A A +LKQF LE ++ LGA F
Sbjct: 117 SSK-KGCLDEKVD--------AGLEALMTMPEIVVAAFAHIFAYLKQFHLENVLRLGALF 167
Query: 395 RSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCD 454
R +G EMTLS NT++QLE+L N ++G+E G+L +MNHT T +G RLL+ WVTHPL D
Sbjct: 168 RPFAGQQEMTLSPNTIRQLEILHNQTDGTENGSLFWLMNHTKTAFGVRLLKYWVTHPLRD 227
Query: 455 RNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPD 514
R LIS RLDAV+EIAES+G +K T+ L+S L LG+ PD
Sbjct: 228 RMLISQRLDAVAEIAESIG------------DKGRGTTVAT------LASTLLLLGKLPD 269
Query: 515 IQRGITRIFHRTAT-PSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLI 573
++RGITRI+H+TAT + F+ ++ + + Q++ + SALL RLI
Sbjct: 270 LERGITRIYHKTATYEAPFLFCNPVVILSDRNFQRV------------RDTRSALLSRLI 317
Query: 574 LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSL 633
+S +VI A KL++++N EAA GD +NL + GQ+ EV ++ ++S +E+L+S
Sbjct: 318 SAVTSTSVIDHANKLVTSLNAEAAVAGDKINLFVA--GQYPEVDECKENIKSIEEDLESF 375
Query: 634 INMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQ 693
+ RK L NLE++SV + L+E+ TKK RYH PEVL A ++
Sbjct: 376 LPSYRKLLKCSNLEYLSVLETSFLVEI--------------GTKKANRYHPPEVLEASER 421
Query: 694 LALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVF 753
+ALA E+L I C AWD FL +F Y+ EF+AAVQALAALDCL +LA +S N+ +VRP F
Sbjct: 422 MALAKEQLNISCAKAWDMFLTDFTSYHMEFRAAVQALAALDCLDSLAVVSCNQGYVRPEF 481
Query: 754 VDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
VD E + I GRHPVLD+ L D FVPNDT L E E QIITGPNMGGKSCYIRQVA
Sbjct: 482 VD--EACLLKIEGGRHPVLDSTLQDAFVPNDTVLSGEGERSQIITGPNMGGKSCYIRQVA 539
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
LI IM+Q+GS+VPA +A+LHV D ++TRMGA D IQ+G STF EEL+E S IL T++S
Sbjct: 540 LITIMSQIGSYVPAVTAKLHVFDAVFTRMGAMDRIQRGSSTFFEELSETSTILHKATSRS 599
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
LV++ ELGRGTSTH+GVAIAYAT+ +LL+ +C LF+THY +
Sbjct: 600 LVVIIELGRGTSTHNGVAIAYATVHHLLQEVQCFTLFITHYLNV 643
>gi|281210061|gb|EFA84229.1| DNA mismatch repair protein [Polysphondylium pallidum PN500]
Length = 1354
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 346/951 (36%), Positives = 532/951 (55%), Gaps = 105/951 (11%)
Query: 83 TTHNK-KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFM 141
+ +NK KYTPLEQQV+E+K +YPD +LM+E GYKF+FFG DAE+A +VL IY+++ NF+
Sbjct: 406 SNNNKIKYTPLEQQVIEIKKQYPDTVLMVECGYKFKFFGNDAEIATRVLNIYSYVAKNFL 465
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
AS+P RL H+RRLV AG+KVGVV+Q ETAA+KA K+ PF R L+ LYT +T
Sbjct: 466 NASVPVQRLYFHLRRLVYAGYKVGVVEQIETAALKAVSSSKSQPFERKLTRLYTASTF-- 523
Query: 202 AEDVGGGE-DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+D+ E D NYLV + + + VAV ISTG+++
Sbjct: 524 IDDIDINENDPVNISPNYLVSFTEQ-----------YKTEDLTEISFVAVSISTGEIICD 572
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLL------------------GQP----LSKQTEKMLL 298
F D LR+ LE L L P E+LL P LS T+K +
Sbjct: 573 TFKDDVLRTHLETRLTHLKPTEVLLPPERTIEKQQQDTTTTTVVSPPYLYLSNLTKKCIK 632
Query: 299 AYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAI 358
Y +NVRV+ + + + AL+ ++ YE + + +N +
Sbjct: 633 TYCK-LNNVRVQTMTEELYDYDRALSSLVEFYE--ADKSTAN----------------TL 673
Query: 359 EGIMNMPDLAVQALALTIRHLKQF-GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR 417
+M +P V L + + +LK+F ++ + +F++ + + L +T++ LE+L+
Sbjct: 674 SSVMMLPKAQVICLNIQLSYLKEFIQFTSLLKVSTNFKTFTLQNHLILPHSTIENLEILK 733
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N + SE G+L ++N T TI G RL+ W+ PL LI R DAV+E+ T
Sbjct: 734 NEWDKSEKGSLFWVLNQTQTIAGRRLIVEWLCKPLMKLELIKERQDAVNELI-------T 786
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT-ATPSEFIAVM 536
S H+ ++S+ L G PD+QR +++I++++ P +F++ M
Sbjct: 787 STKTTSHN---------------LISTFLK--GSIPDLQRNLSKIYYQSQCLPKDFLSTM 829
Query: 537 QAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL-LSTVNKE 595
++ ++L QL ++E K L S LL + S + + LS+++
Sbjct: 830 KSF----QKLDQL-----FKEVSGLKELKSKLLNDIFTNEQSNTKFNERLQFYLSSIDHT 880
Query: 596 AADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS--VSG 653
AA + + NL SN + + ++ +++ +EEL + RK LG LE++ +
Sbjct: 881 AASKDEKENLWSHSNI-YPLIVETQEKIKTVQEELSDHLRKIRKDLGKPTLEYLHQPKNN 939
Query: 654 ITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+ +LIELP NFK VP +W KVN+T+K RYH P V+T L L E LTI + +W F
Sbjct: 940 LEYLIELPINFKSVPKDWLKVNATQKLARYHVPAVVTTLKLLQQNRELLTIRAKESWLDF 999
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVL 772
L +F Y+ F + LA LDCL++L+ + + +VRP F ++ I I +GRHP++
Sbjct: 1000 LSKFSEDYSLFSNVISKLANLDCLYSLSVVGKQAGYVRPEFTENS---GIEIVNGRHPIV 1056
Query: 773 DTILL-DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
+ +L + +VPN L + E IITGPNMGGKS +IRQ +LI IMAQ+GS VPA+S
Sbjct: 1057 EHLLQGEQYVPNSVRLSPDAERAMIITGPNMGGKSSFIRQTSLIVIMAQIGSNVPAASCR 1116
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
L V+D IYTRMGA D+I++G STF EL E S IL+ T +SLVI+DELGRGTSTHDGVA
Sbjct: 1117 LGVVDAIYTRMGAHDNIEKGSSTFFVELQETSAILQQATPRSLVILDELGRGTSTHDGVA 1176
Query: 892 IAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL-TSHKVMGPMDSKSD 950
IAY++L Y++E K+C LFVTHYP +A+++ ++ +V YH+ ++ + P K
Sbjct: 1177 IAYSSLRYIIEKKQCFCLFVTHYPLLAELENQYPTTVANYHMGFIEQKQEDYTPAIPK-- 1234
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
V +LY+V G +++S+G VA++A LP S + ++ + +L+ ++++V
Sbjct: 1235 --VIFLYQVTKGAAKNSYGLNVARIADLPKSVLMISSAKSDELKHSITNKV 1283
>gi|317034255|ref|XP_001396245.2| DNA mismatch repair protein MSH3 [Aspergillus niger CBS 513.88]
Length = 1118
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 337/942 (35%), Positives = 534/942 (56%), Gaps = 90/942 (9%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 206 KLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEHPSE 265
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHLD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ L
Sbjct: 266 AHLD-RFASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAALKAAGDNRNAPFVRKLTNL 324
Query: 194 YTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
YTK T ++ AE +GG G + YL+C+ + + +G+ V++G+V
Sbjct: 325 YTKGTYIDDAEGLGGPMPAASGGASPATGYLLCITETNAKG-------WGNDEKVQVGIV 377
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TGD+VY +F DGF+RS +E LL ++P ELL+ LSK TEK++ +G NV
Sbjct: 378 AVQPATGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGELSKATEKLVQHLSGSKLNVF 437
Query: 308 ----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
RVE + + + V S Y + + ++ Q + ++ ++N
Sbjct: 438 GDKTRVERVLKSKTAAAESHSHVSSFYAGKMKTASAADDAQASSL---------LQKVLN 488
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I H+K++GLE + L F+ S M L+ NTL LE+ +N ++ +
Sbjct: 489 LPEQVTICLSSMIEHMKEYGLEYVFELTKYFQHFSSRSHMLLNGNTLMSLEIYQNQTDHT 548
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L ++ T T +G R+LR+WV PL D++ + R++AV E+
Sbjct: 549 TKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEEL--------------- 593
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
KN + T++ + +L V + D+++ + RI++ T E + V+Q +
Sbjct: 594 ---KNPEKTVMVERLKGLLGKVKS------DLEKSLIRIYYGKCTRPELLTVLQTMQMIA 644
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
++ + + S ++ A+ P ++ L +N AA D
Sbjct: 645 QEFSDVKSPADT--GFASTAINEAI-------TCLPTILEDVVAFLDKINMHAAKSDDKY 695
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL--- 660
+ + +++ + + S + EL+ ++ ++LG + +E+ SV+GI +LIE+
Sbjct: 696 AFFREAE-ETEDISDQKLGIASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVENS 754
Query: 661 PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
A+ K VP +W KV+ TKK R+H+PEV+ + Q E L C A+ S L +
Sbjct: 755 SASIKRVPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIATK 814
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
Y F+ +VQALA LDCL ALAT++ +V+P + D H +Q+ GRHP+++ +LLD+
Sbjct: 815 YQPFRDSVQALATLDCLIALATIASQPGYVKPEYTD-HTCIQVD--QGRHPMVEQLLLDS 871
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
+VPND +L +++ ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA+L +LD ++
Sbjct: 872 YVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLDAVF 931
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY
Sbjct: 932 TRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDY 991
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
++ + + LF+THY ++ + F + H+ + S + +D+++T+LY+
Sbjct: 992 MVRSIRSLTLFITHYQHLSSMVHSFADQELRNVHMRFTES-------GTGTDEEITFLYE 1044
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
V GV+ S+G VA+LA LP + + +A + +LE ++ R
Sbjct: 1045 VGEGVAHRSYGLNVARLANLPGALLDQARQKSKELEEKIRRR 1086
>gi|156377857|ref|XP_001630862.1| predicted protein [Nematostella vectensis]
gi|156217891|gb|EDO38799.1| predicted protein [Nematostella vectensis]
Length = 886
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 358/938 (38%), Positives = 531/938 (56%), Gaps = 86/938 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLEQQ +E+K + D +L IE GYKF+FFG+DAE+AAK L I +DHNFM ASIPT
Sbjct: 8 YTPLEQQFMEIKARNSDAVLFIECGYKFKFFGDDAEIAAKELNIMCFMDHNFMVASIPTH 67
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL--EAAEDVG 206
RL++HV+RLVN G+KVGVVKQ ETAA+KA K+ F R L ALYTK+TL E E +
Sbjct: 68 RLHIHVKRLVNKGYKVGVVKQMETAALKAASDNKSNVFTRELHALYTKSTLVGEDMEVLR 127
Query: 207 GGEDGCGGES-------NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
G ED GG+ YL+CV ++D G + G+VAV+ STG+++Y
Sbjct: 128 GKEDAAGGDEVSLEAHGGYLMCVHEEDS----------GAKTGITYGIVAVQPSTGEIIY 177
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDC 316
F D S LE L LSP+ELL+ LS++T L +Y A +R E
Sbjct: 178 DYFPDSPSCSELETRLEHLSPSELLIHDTLSERTRSFLDVFSSYYKSADPIRTERIPDPL 237
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
+++ + N ++T ++ N + + + L VQ +++
Sbjct: 238 PSSQSDANQILQEFCNSTDETFGSS---------SPNSQETLLQTLLTLPLPVQKCFISL 288
Query: 377 -RHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
++LK F L++++ L +F S + M L+ LQ LE+L++ GS G+LL I++H
Sbjct: 289 QKYLKDFKLDKVLKLAGNFEKFSTIAKFMKLNGCALQNLEILKSQC-GSRKGSLLGILDH 347
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T +G RLL+RW+T PL ++ I RL AVS + S ++
Sbjct: 348 TSTPFGKRLLKRWITQPLLEKREIEERLKAVSCL--------------------SALSSD 387
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+P +L S+ L PD+++G+ I+++ + EF+++ +A L +LH + +
Sbjct: 388 QP----LLKSIHRLLSHIPDLEKGLCAIYYKKCSTVEFLSIAKA-------LSKLHDELK 436
Query: 555 YREKVTSKTLH-SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
E ++K L S++L R P ++ L+ ++++AA GD L +F
Sbjct: 437 STELNSAKELAGSSILSRTF--TEVPDLLSGVEDFLNQIDEKAAKCGDKTKLFT-DPSKF 493
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIE-----LPANFKVPL 668
V + + EL + R+ + ++++ +VSG LIE LP+ VP
Sbjct: 494 PPVLTCIQEIDGLTAELKEHRSEIRRTIQHPSVDYCTVSGNEFLIEVRNAKLPS---VPA 550
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
+W K+++TK+ R+ +P V + E+L C+ AW FL F Y F AV+
Sbjct: 551 DWIKISATKQICRFRTPFVEEKFKSICQWREKLAQACQEAWLEFLDIFSTSYTRFHRAVK 610
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTN 786
+A LDC+ +LAT++R +V PV + E + I GRHPV+D +L ++ +VPN+T
Sbjct: 611 LVANLDCIMSLATVARQPGYVCPVIKKETEASSVLITQGRHPVIDVLLQEHAQYVPNNTE 670
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L+ E C IITGPNMGGKS YI+QVALI +MAQ+GSFVPA S EL LD IYTRMGASD
Sbjct: 671 LNTEGPRCMIITGPNMGGKSSYIKQVALIVLMAQMGSFVPAHSVELTPLDAIYTRMGASD 730
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
+I +GRSTF+ EL E S IL T +SLVI+DELGRGTSTHDGVAIAYATL + ++
Sbjct: 731 NIYKGRSTFMVELQETSEILAQATRRSLVILDELGRGTSTHDGVAIAYATLRHFIDQTHS 790
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS----HKVMGPMDSKSDQDVTYLYKVVPG 962
+ LFVTHYP +A+++ F G V H++++TS MD+ + VT+LY++V G
Sbjct: 791 LTLFVTHYPSLAELERIFPGHVTNNHMAFMTSDGDTELASVAMDTPA---VTFLYELVRG 847
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
V+ S+G VA+LA +P + ++ A + LE+E+++R
Sbjct: 848 VAARSYGLNVARLAGIPINIVAMAAGKSHDLESEIANR 885
>gi|190359868|sp|A2R1F6.2|MSH3_ASPNC RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
Length = 1119
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 336/943 (35%), Positives = 534/943 (56%), Gaps = 91/943 (9%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 206 KLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEHPSE 265
Query: 134 -AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
+HLD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+
Sbjct: 266 ASHLD-RFASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAALKAAGDNRNAPFVRKLTN 324
Query: 193 LYTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGV 247
LYTK T ++ AE +GG G + YL+C+ + + +G+ V++G+
Sbjct: 325 LYTKGTYIDDAEGLGGPMPAASGGASPATGYLLCITETNAKG-------WGNDEKVQVGI 377
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
VAV+ +TGD+VY +F DGF+RS +E LL ++P ELL+ LSK TEK++ +G NV
Sbjct: 378 VAVQPATGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGELSKATEKLVQHLSGSKLNV 437
Query: 308 -----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
RVE + + + V S Y + + ++ Q + ++ ++
Sbjct: 438 FGDKTRVERVLKSKTAAAESHSHVSSFYAGKMKTASAADDAQASSL---------LQKVL 488
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
N+P+ L+ I H+K++GLE + L F+ S M L+ NTL LE+ +N ++
Sbjct: 489 NLPEQVTICLSSMIEHMKEYGLEYVFELTKYFQHFSSRSHMLLNGNTLMSLEIYQNQTDH 548
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
+ G+L ++ T T +G R+LR+WV PL D++ + R++AV E+
Sbjct: 549 TTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEEL-------------- 594
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
KN + T++ + +L V + D+++ + RI++ T E + V+Q +
Sbjct: 595 ----KNPEKTVMVERLKGLLGKVKS------DLEKSLIRIYYGKCTRPELLTVLQTMQMI 644
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
++ + + S ++ A+ P ++ L +N AA D
Sbjct: 645 AQEFSDVKSPADT--GFASTAINEAI-------TCLPTILEDVVAFLDKINMHAAKSDDK 695
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-- 660
+ + +++ + + S + EL+ ++ ++LG + +E+ SV+GI +LIE+
Sbjct: 696 YAFFREAE-ETEDISDQKLGIASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVEN 754
Query: 661 -PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG 718
A+ K VP +W KV+ TKK R+H+PEV+ + Q E L C A+ S L +
Sbjct: 755 SSASIKRVPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIAT 814
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
Y F+ +VQALA LDCL ALAT++ +V+P + D H +Q+ GRHP+++ +LLD
Sbjct: 815 KYQPFRDSVQALATLDCLIALATIASQPGYVKPEYTD-HTCIQVD--QGRHPMVEQLLLD 871
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
++VPND +L +++ ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA+L +LD +
Sbjct: 872 SYVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLDAV 931
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LD
Sbjct: 932 FTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLD 991
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLY 957
Y++ + + LF+THY ++ + F + H+ + S + +D+++T+LY
Sbjct: 992 YMVRSIRSLTLFITHYQHLSSMVHSFADQELRNVHMRFTES-------GTGTDEEITFLY 1044
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+V GV+ S+G VA+LA LP + + +A + +LE ++ R
Sbjct: 1045 EVGEGVAHRSYGLNVARLANLPGALLDQARQKSKELEEKIRRR 1087
>gi|212536476|ref|XP_002148394.1| DNA mismatch repair protein Msh3 [Talaromyces marneffei ATCC 18224]
gi|210070793|gb|EEA24883.1| DNA mismatch repair protein Msh3 [Talaromyces marneffei ATCC 18224]
Length = 1116
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 338/941 (35%), Positives = 521/941 (55%), Gaps = 89/941 (9%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+QV+++K K+ D LL++EVGYKFRFFGEDA AAK L I
Sbjct: 203 KLTPMEKQVIDIKRKHMDTLLVVEVGYKFRFFGEDARTAAKELSIVCIPGKMRFDEHPSE 262
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHLD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ +
Sbjct: 263 AHLDR-FASASIPVHRLHVHVKRLVTAGHKVGVVRQLETAALKAAGDNRNAPFVRKLTNV 321
Query: 194 YTKAT-LEAAEDVGGGEDGCGGES---NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
YTK T ++ AE + G + YL+C+ + + + G V +G+VA
Sbjct: 322 YTKGTYIDDAEGLSTPAAASAGATPATGYLLCITESNTS---------GSDERVHVGIVA 372
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-- 307
V+ +TGD++Y EF DGF+R +E LL ++P E+L+ L+K T+K++ +G NV
Sbjct: 373 VQPATGDIIYDEFEDGFMRGEIETRLLHIAPCEILIVGELTKATDKLVKHLSGSKMNVFG 432
Query: 308 ---RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
RVE +R + V S Y + T D + G + +E ++ +
Sbjct: 433 DKVRVERVARSKTAAAEGHSRVSSFYAQKLKST---------DAGDDGKASALLEKVLQL 483
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
PD LA I HL ++GLE + L F+S S M L+ NTL LE+ +N ++ S
Sbjct: 484 PDQVTVCLASMIDHLSEYGLEHVFDLTKYFQSFSARSHMLLNGNTLTSLEIYQNQTDYSS 543
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L M+ T T +G RLLR+WV PL D+ + R+DAV E+
Sbjct: 544 KGSLFWTMDRTRTRFGQRLLRKWVGRPLLDKRQLEERVDAVEELL--------------- 588
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
NS+ + + +LS V + D++R + RI++ T E + V+Q +
Sbjct: 589 ---NSEQNQLTEKLKDLLSKVRS------DLERSLIRIYYGKCTRPELLTVLQTLQMIAN 639
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+HI S + A+ A+ P + L +N AA D
Sbjct: 640 TF--VHIKSAGDTGFESTMISEAI-------AALPMIQEDVVMFLEKINMHAAKNDDKYE 690
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN- 663
S + ++ + + S + +L+ +++ + LG + +++++ +GI +LIE+ N
Sbjct: 691 FFRESE-ESDDITEQKLGIASVEHDLEQHLSVAAEVLGKKKVDYVTSAGIEYLIEVDNNS 749
Query: 664 --FK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
FK VP +WAK++ TKK R+H+P+V+ + Q E L C A+ L E Y
Sbjct: 750 AQFKRVPASWAKISGTKKLSRFHTPDVVQLIRQRDQHKEALAAACDKAYIRLLGEISTRY 809
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
F+ +Q+LA LDCL +LA ++ + +P + ++ +I + GRHP+++ +LLD++
Sbjct: 810 QSFRDCIQSLALLDCLFSLAAIATQPGYTKPQYTNE---TRIVVEQGRHPMVEQLLLDSY 866
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPNDTNL + ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA L +LD ++T
Sbjct: 867 VPNDTNLATDETRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAKSATLGMLDAVFT 926
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA+A LDY+
Sbjct: 927 RMGAFDNMLTGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAHAVLDYM 986
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTGS-VGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
+ + + LF+THY ++ + F+ + + H+ + S D + ++++T+LY+V
Sbjct: 987 VRSIRSLTLFITHYQNLSVMTKSFSNNELRNVHMRFTESGG-----DKEGEEEITFLYEV 1041
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA LP S + A + + +LE ++ R
Sbjct: 1042 GEGVAHRSYGLNVARLANLPHSVLDLARLKSRELEEKIKRR 1082
>gi|358373072|dbj|GAA89672.1| DNA mismatch repair protein Msh3 [Aspergillus kawachii IFO 4308]
Length = 1117
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 336/942 (35%), Positives = 532/942 (56%), Gaps = 90/942 (9%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 205 KLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEHPSE 264
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHLD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ L
Sbjct: 265 AHLD-RFASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAALKAAGDNRNAPFVRKLTNL 323
Query: 194 YTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
YTK T ++ AE + G G + YL+C+ + + +G+ V++G+V
Sbjct: 324 YTKGTYIDDAEGLEGPMPAASGGASPATGYLLCITETNAKG-------WGNDEKVQVGIV 376
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TGD+VY +F DGF+RS +E LL ++P ELL+ LSK TEK++ +G NV
Sbjct: 377 AVQPATGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGELSKATEKLVQHLSGSKLNVF 436
Query: 308 ----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
RVE + + + V S Y + + ++ Q + ++ ++N
Sbjct: 437 GDKTRVERVPKSKTAAAESHSHVSSFYAGKMKTASAADDAQASSL---------LQKVLN 487
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I H+K++GLE + L F+ S M L+ NTL LE+ +N ++ +
Sbjct: 488 LPEQVTICLSSMIEHMKEYGLEYVFELTKYFQHFSSRSHMLLNGNTLMSLEIYQNQTDHT 547
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L ++ T T +G R+LR+WV PL D++ + R++AV E+
Sbjct: 548 TKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEEL--------------- 592
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
KN + T++ + +L V + D+++ + RI++ T E + V+Q +
Sbjct: 593 ---KNPEKTVMVERLKGLLGKVKS------DLEKSLIRIYYGKCTRPELLTVLQTMQMIA 643
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
++ + + SA + I P ++ L +N AA D
Sbjct: 644 QEFSDV-------KSPADTGFASAAINEAITCL--PTILEDVIAFLDKINMHAAKSDDKY 694
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL--- 660
+ + +++ + + S + EL+ +++ ++LG + +E+ SV+GI +LIE+
Sbjct: 695 AFFRETE-ETEDISDQKLGIASVEHELEEHLSVAGQKLGKKTVEYKSVAGIDYLIEVENS 753
Query: 661 PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
A+ K VP +W KV+ TKK R+H+PEV+ + Q E L C A+ S L +
Sbjct: 754 SASIKRVPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDKAFISLLADIATK 813
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
Y F+ +VQALA LDCL ALAT++ +V+P + D H +Q+ GRHP+++ +LLD+
Sbjct: 814 YQPFRDSVQALATLDCLIALATIASQPGYVKPEYTD-HTCIQVD--QGRHPMVEQLLLDS 870
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
+VPND +L +++ ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA+L +LD ++
Sbjct: 871 YVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLDAVF 930
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY
Sbjct: 931 TRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDY 990
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
++ + + LF+THY ++ + F + H+ + S + +++++T+LY+
Sbjct: 991 MVRSIRSLTLFITHYQHLSSMVHTFADHELRNVHMRFTES-------GTGTNEEITFLYE 1043
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
V GV+ S+G VA+LA LP + +A + +LE ++ R
Sbjct: 1044 VGEGVAHRSYGLNVARLANLPGPLLDQARQKSKELEEKIRRR 1085
>gi|302498746|ref|XP_003011370.1| hypothetical protein ARB_02429 [Arthroderma benhamiae CBS 112371]
gi|291174920|gb|EFE30730.1| hypothetical protein ARB_02429 [Arthroderma benhamiae CBS 112371]
Length = 1141
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 345/976 (35%), Positives = 542/976 (55%), Gaps = 100/976 (10%)
Query: 74 NPIPTP---SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL 130
+P P P +++ K TP+E+Q++E+K K+ D +L+I+VGYK++F+GEDA +AAKVL
Sbjct: 214 SPPPAPKGRAAKKAGGSKLTPMERQIMEIKNKHLDAVLLIQVGYKYQFYGEDARIAAKVL 273
Query: 131 GIY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK 176
I AHL F +AS+P RL+VHV+RLV AG+KVGVVKQ ETAA+K
Sbjct: 274 SIVCIPGKLRFDEHPSEAHLTR-FASASVPIHRLHVHVKRLVAAGYKVGVVKQLETAALK 332
Query: 177 AHGPGKAGPFGRGLSALYTKATL---EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
A G + PF R L+ +YTKAT +A ++ G + G YL+C+ + G G+
Sbjct: 333 AAGDNRNAPFVRKLTNMYTKATYIEDDAELELSGALEPSTG---YLLCLTES-GAKGQ-- 386
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT 293
GDG V++G+VAV+ +TG+V+Y F DGF+RS +E LL ++P ELLL LS T
Sbjct: 387 ----GDGEKVQIGIVAVQPATGNVIYDSFEDGFMRSEIETRLLHIAPCELLLVGDLSAAT 442
Query: 294 EKMLLAYAGP-----ASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
K++ A +VR+E + A + + S Y T S
Sbjct: 443 NKLVQHLAKGRMTTFGDSVRIERREKSKTAAAEAHSHISSFYAGKMAATGS--------- 493
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSAN 408
PE N + ++ ++ +PD L+ I+HL ++GLE + L F+S S M L+ N
Sbjct: 494 PEDTNASNLLDQVLKLPDDVTICLSAMIKHLTEYGLEHVFDLTKYFQSFSARSHMLLNGN 553
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL LE+ +N ++ S G+L MN T T +G RLLRRWV PL D+ + R +AV+E+
Sbjct: 554 TLTNLEIYQNQTDYSSKGSLFWSMNRTRTKFGQRLLRRWVGRPLLDKAKLEERTEAVTEL 613
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
+S S T Y L + L+ + D+++ + R+++ +
Sbjct: 614 LDSDKSTLT----------------------YNLGATLSQV--RVDLEKALIRVYYGKCS 649
Query: 529 PSEFIAVMQAILYAGKQLQQLH--IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
E + +++++ + D ++ + S+++ A+L P +
Sbjct: 650 RPELLTMLKSMQSIAASFAHVKSPADSAFKSPILSESI--AIL---------PTMHDDVV 698
Query: 587 KLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
L+ +N+ AA + D + S + E+ R + + + EL + + LG + +
Sbjct: 699 SYLNKINETAAKKDDKYDFFRESE-ESEEIGEHRLMIGTIEYELKDHLKSIAETLGKKKV 757
Query: 647 EFMSVSGITHLIELP----ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
+++SV+GI +L+E+ A KVP +W K++ TKK R+H+PEV+ + + E L
Sbjct: 758 QYVSVAGIDYLVEVENSQGALKKVPASWRKISGTKKVSRFHTPEVVKMMRERDQQKESLA 817
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQI 762
C A+ L + Y F+ +QALA +D LH+L+ ++ +V+P + DD I
Sbjct: 818 AACDTAFLKLLSDISTKYQLFRDCIQALATIDALHSLSVIAAQPGYVKPKYTDD---TII 874
Query: 763 HICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVG 822
+I GRHP+++ +L+D++VPNDT L + +ITGPNMGGKS Y+RQ+ALI IM Q+G
Sbjct: 875 NITQGRHPMVEKVLIDSYVPNDTQLSTDETRALLITGPNMGGKSSYVRQIALICIMGQIG 934
Query: 823 SFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGR 882
S+VPA SA L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGR
Sbjct: 935 SYVPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGR 994
Query: 883 GTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFT-GSVGTYHVSYLTSHKV 941
GTSTHDGVAIA A LDY++ + + + LF+THY ++ + + F G + H+ + S
Sbjct: 995 GTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSRLASAFPGGELRNVHMKFTES--- 1051
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
QD+T+LY++ GV+ S+G VA+LA +P + A V + +LEA++ SR
Sbjct: 1052 -----GDHGQDITFLYEIGEGVAHRSYGLNVAKLANIPAGILEVAQVKSQELEAKI-SRK 1105
Query: 1002 QNRSAKRDLLVKLSDQ 1017
+ R + LSD+
Sbjct: 1106 KMGGVLRGMFQTLSDE 1121
>gi|391864666|gb|EIT73961.1| mismatch repair MSH3 [Aspergillus oryzae 3.042]
Length = 1111
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 343/951 (36%), Positives = 532/951 (55%), Gaps = 106/951 (11%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------------- 133
+K TP+E+QV+++K K+ D +L++EVGYKFRFFGEDA AAK L I
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 134 -AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
AHLD F +ASIP RL+VHV+RLV+AG KVGVV+Q ETAA+KA G + PFGR L+
Sbjct: 256 EAHLD-RFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAALKAAGDNRNAPFGRKLTN 314
Query: 193 LYTKATLEAAEDVGGGE--------DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR 244
LYTK T +D+ G E G + Y++C+ + + +G+ V
Sbjct: 315 LYTKGTY--IDDMEGLEGSTASMSATGTSMATGYMLCITETN-------TKGWGNDEKVL 365
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA 304
+G+VAV+ +TGD+VY EF DGF+RS +E LL L+P E+L+ LSK TEK++ +G
Sbjct: 366 VGIVAVQPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGDLSKATEKLVQHLSGNK 425
Query: 305 SN-----VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE 359
+N +RVE A + + + V S Y + + N+ Q S ++
Sbjct: 426 TNAFGDEIRVERAPKAKTAAAESHSHVSSFYAERMKKVNATNDVQA---------SSLLQ 476
Query: 360 GIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNN 419
++N+ + A L+ I+H+ ++GLE + L F+ S M L+ANTL LE+ N
Sbjct: 477 KVLNLSEQATICLSSMIKHMSEYGLEHVFQLTKYFQHFSSRSHMLLNANTLNSLEIYHNQ 536
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
++ S G+L ++ T T +G R+LR+WV PL ++ + R+DAV E+
Sbjct: 537 TDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEEL----------- 585
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---- 535
KN + + Q +L + T D+++ + R+++ T E + +
Sbjct: 586 -------KNLERVALAEQMKCLLGRIKT------DLEKSLIRVYYGKCTRPELLTLLQTL 632
Query: 536 -MQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
M A +AG Q D + + SK + AS P ++ + L +N
Sbjct: 633 QMIAQEFAGVQSPA---DTGFSSPLISKAV-----------ASLPTILEDVVRFLDKINM 678
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
AA D S + E+ + + + + +L+ + + LG R +++++V+GI
Sbjct: 679 HAAKNDDKYEFFRESE-ETDEITEHKLGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGI 737
Query: 655 THLIEL----PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+LI + P+ KVP +W K++ TK R+H+PEV+ L Q E L C A+
Sbjct: 738 EYLIAVENKSPSIKKVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYA 797
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+FL E Y F+ +VQ+LA LDCL +LAT++ +V+P + + H +Q+ GRHP
Sbjct: 798 TFLAEISASYQSFRDSVQSLATLDCLISLATIANQPGYVKPEYTN-HTCIQVD--QGRHP 854
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++ +LLD++VPND +L +++ ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA
Sbjct: 855 MVEQLLLDSYVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPARSA 914
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
+L +LD ++TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGV
Sbjct: 915 KLGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGV 974
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKS 949
AIA A LDY++ + + LF+THY ++ + F + H+ + S GP +
Sbjct: 975 AIAQAVLDYMIRSIRSLTLFITHYQHLSSMVHSFPDHELRNVHMRFTES----GP----T 1026
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
++++T+LY+V GV+ S+G VA+LA LP I A +A+LE ++ R
Sbjct: 1027 EEEITFLYEVREGVAHRSYGLNVARLANLPAPLIELAKQKSAELEQKIHRR 1077
>gi|169765552|ref|XP_001817247.1| DNA mismatch repair protein MSH3 [Aspergillus oryzae RIB40]
gi|121806689|sp|Q2UT70.1|MSH3_ASPOR RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|83765102|dbj|BAE55245.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1111
Score = 571 bits (1471), Expect = e-159, Method: Compositional matrix adjust.
Identities = 343/951 (36%), Positives = 532/951 (55%), Gaps = 106/951 (11%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------------- 133
+K TP+E+QV+++K K+ D +L++EVGYKFRFFGEDA AAK L I
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 134 -AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
AHLD F +ASIP RL+VHV+RLV+AG KVGVV+Q ETAA+KA G + PFGR L+
Sbjct: 256 EAHLD-RFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAALKAAGDNRNAPFGRKLTN 314
Query: 193 LYTKATLEAAEDVGGGE--------DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR 244
LYTK T +D+ G E G + Y++C+ + + +G+ V
Sbjct: 315 LYTKGTY--IDDMEGLEGSTASMSATGTSMATGYMLCITETN-------TKGWGNDEKVL 365
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA 304
+G+VAV+ +TGD+VY EF DGF+RS +E LL L+P E+L+ LSK TEK++ +G
Sbjct: 366 VGIVAVQPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGDLSKATEKLVQHLSGNK 425
Query: 305 SN-----VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE 359
+N +RVE A + + + V S Y + + N+ Q S ++
Sbjct: 426 TNAFGDEIRVERAPKAKTAAAESHSHVSSFYAERMKKVNATNDVQA---------SSLLQ 476
Query: 360 GIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNN 419
++N+ + A L+ I+H+ ++GLE + L F+ S M L+ANTL LE+ N
Sbjct: 477 KVLNLSEQATICLSSMIKHMSEYGLEHVFQLTKYFQHFSSRSHMLLNANTLNSLEIYHNQ 536
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
++ S G+L ++ T T +G R+LR+WV PL ++ + R+DAV E+
Sbjct: 537 TDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEEL----------- 585
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---- 535
KN + + Q +L + T D+++ + R+++ T E + +
Sbjct: 586 -------KNLERVALVEQMKCLLGRIKT------DLEKSLIRVYYGKCTRPELLTLLQTL 632
Query: 536 -MQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
M A +AG Q D + + SK + AS P ++ + L +N
Sbjct: 633 QMIAQEFAGVQSPA---DTGFSSPLISKAV-----------ASLPTILEDVVRFLDKINM 678
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
AA D S + E+ + + + + +L+ + + LG R +++++V+GI
Sbjct: 679 HAAKNDDKYEFFRESE-ETDEITEHKLGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGI 737
Query: 655 THLIEL----PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+LI + P+ KVP +W K++ TK R+H+PEV+ L Q E L C A+
Sbjct: 738 EYLIAVENKSPSIKKVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYA 797
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+FL E Y F+ +VQ+LA LDCL +LAT++ +V+P + + H +Q+ GRHP
Sbjct: 798 TFLAEISASYQSFRDSVQSLATLDCLISLATIANQPGYVKPEYTN-HTCIQVD--QGRHP 854
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++ +LLD++VPND +L +++ ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA
Sbjct: 855 MVEQLLLDSYVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPARSA 914
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
+L +LD ++TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGV
Sbjct: 915 KLGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGV 974
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKS 949
AIA A LDY++ + + LF+THY ++ + F + H+ + S GP +
Sbjct: 975 AIAQAVLDYMIRSIRSLTLFITHYQHLSSMVHSFPDHELRNVHMRFTES----GP----T 1026
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
++++T+LY+V GV+ S+G VA+LA LP I A +A+LE ++ R
Sbjct: 1027 EEEITFLYEVREGVAHRSYGLNVARLANLPAPLIELAKQKSAELEQKIHRR 1077
>gi|190359867|sp|Q5B6T1.2|MSH3_EMENI RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
Length = 1105
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 337/940 (35%), Positives = 526/940 (55%), Gaps = 92/940 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E+QV+E+K K+ D +L+IEVGYKFRFFGEDA +AAK L I AH
Sbjct: 196 TPMEKQVIEIKKKHMDTILLIEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEHPSEAH 255
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ +YT
Sbjct: 256 LD-RFASASIPVQRLHVHVKRLVAAGHKVGVVRQLETAALKAAGDNRNAPFVRKLTNVYT 314
Query: 196 KAT-LEAAEDVGGGEDGCGGES--NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
K+T ++ E + G G G S Y++C+ + + +G+ V +G+VAV+
Sbjct: 315 KSTYIDDIESLEGSTAGASGASATGYILCITETNARG-------WGNDEKVHVGIVAVQP 367
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV----- 307
+TGD+VY EF+DGF+RS +E LL ++P E+L+ LSK TEK++ +G NV
Sbjct: 368 TTGDIVYDEFDDGFMRSEIETRLLHIAPCEMLIVGELSKATEKLVQHLSGSKMNVFGDKV 427
Query: 308 RVECASRDCFIGGGALAEVMSLY-ENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
RVE A + + + V S Y E M ++ D + + ++ ++ +PD
Sbjct: 428 RVERAPKAKTAAAESHSHVSSFYAEKM----------KSADAADDEVASNLLQKVLGLPD 477
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
L+ I+H+ ++GLE ++ L F+ S M L+ NTL LE+ +N ++ S G
Sbjct: 478 QVTICLSAMIKHMTEYGLEHVLQLTKYFQHFSSRSHMLLNGNTLTSLEIYQNQTDYSSKG 537
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L ++ T T +G R+LR+WV PL DR + R++AV E+ + +R
Sbjct: 538 SLFWTLDRTQTRFGQRMLRKWVGRPLLDRRQLEDRVNAVEELKD----FR---------- 583
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGR-SPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
+V +VE + LG+ D+++G+ RI++ + E + ++Q + ++
Sbjct: 584 ---NVVMVE--------RIKGLLGKIKHDLEKGLIRIYYGKCSRPELLTILQTMQMIAQE 632
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
+ E S + + I+ S P ++ L+ +N AA D
Sbjct: 633 FADI-------ESPADTGFSSPAISQAIM--SLPTILKDVVFFLNKINMHAARNDDKYEF 683
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL----P 661
+ + + + EL+ + + LG + + ++SV+GI +L+E+ P
Sbjct: 684 FREEEETEEISEH-KLGIGAVEHELEEHRPVAGEALGKKMVTYVSVAGIDYLVEVENNSP 742
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
A +VP +W K++ TKK R+H+PEV+ + Q E L C A+ + E Y
Sbjct: 743 AIKRVPASWMKISGTKKVSRFHTPEVVKMIRQRDQHREALAAACDKAFLALQAEIATNYQ 802
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
+ VQ+LA LDCL +LATL+ +V+P + E IH+ GRHP+++ +LLD++V
Sbjct: 803 ALRDCVQSLATLDCLVSLATLASQPGYVKPEYT---EETCIHVEQGRHPMVEQLLLDSYV 859
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND NL + + ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA +A+L +LD ++TR
Sbjct: 860 PNDINLDSSKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQAAKLGMLDAVFTR 919
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
MGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY++
Sbjct: 920 MGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMV 979
Query: 902 EHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
+ + LF+THY ++ + F G + H+ + S + +D+D+T+LY++
Sbjct: 980 RSIRSLTLFITHYQHLSAMVHSFPDGELRNVHMRFSES-------GTGADEDITFLYEIG 1032
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA LP + A +A+LE ++ R
Sbjct: 1033 EGVAHRSYGLNVARLANLPAPLLEMAKQKSAELEEKIRRR 1072
>gi|315046776|ref|XP_003172763.1| DNA mismatch repair protein Msh3 [Arthroderma gypseum CBS 118893]
gi|311343149|gb|EFR02352.1| DNA mismatch repair protein Msh3 [Arthroderma gypseum CBS 118893]
Length = 1140
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 342/957 (35%), Positives = 530/957 (55%), Gaps = 95/957 (9%)
Query: 74 NPIPTP---SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL 130
+P P P S++ K TP+E+Q++E+K K+ D +L+I+VGYK++F+GEDA +AAKVL
Sbjct: 213 SPPPQPKGKSAKKVGGSKLTPMEKQIIEIKNKHLDAVLLIQVGYKYQFYGEDARIAAKVL 272
Query: 131 GIY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK 176
I AHL F +AS+P RL+VHV+RLV AG+KVGVVKQ ETAA+K
Sbjct: 273 SIVCIPGKLRFDEHPSEAHLTR-FASASVPIHRLHVHVKRLVAAGYKVGVVKQLETAALK 331
Query: 177 AHGPGKAGPFGRGLSALYTKATL---EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
A G + PF R L+ +YTKAT +A ++ G + G YL+C+ + G G+
Sbjct: 332 AAGDNRNAPFVRKLTNMYTKATYIEDDAELELSGSLEPSTG---YLLCLTES-GAKGQ-- 385
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT 293
GDG V++G+VAV+ +TG+V++ F DGF+RS +E LL ++P ELLL LS T
Sbjct: 386 ----GDGEKVQIGIVAVQPATGNVIHDSFEDGFMRSEIETRLLHIAPCELLLVGELSSAT 441
Query: 294 EKMLLAYAGP-----ASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
K++ + +VR+E + A + + S Y T
Sbjct: 442 NKLVQHLSKGRMTTFGDSVRIERREKTKTAAAEAHSHISSFYAGKMAAT---------GA 492
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSAN 408
PE + ++ ++ +PD L+ I+HL ++GLE + L F+S S M L+ N
Sbjct: 493 PEDTKSSTLLDQVLQLPDDVSVCLSAMIKHLTEYGLEHVFDLTKYFQSFSARSHMMLNGN 552
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL LE+ +N S+ S G+L MN T T +G RLLRRWV PL D+ + R +AV+E+
Sbjct: 553 TLTNLEIYQNQSDYSSKGSLFWSMNRTRTKFGQRLLRRWVGRPLLDKAKLEERTEAVTEL 612
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
+S S T Y L S LT + D+++ + R+++ T
Sbjct: 613 LDSDKSTLT----------------------YNLGSTLTQV--KIDLEKALIRVYYGKCT 648
Query: 529 PSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL 588
E + ++ K +Q + + + + S +L I A P +
Sbjct: 649 RPELLTML-------KSMQSIAMSFAHVKSPADTGYSSPILSESI--AILPTMHDDVVSY 699
Query: 589 LSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEF 648
L+ +N+ AA + D + S + E+ R + + + EL + + LG + +++
Sbjct: 700 LNKINETAAKKDDKYDFFRESE-ESEEIGEHRLMIGTIEYELKDHLKSIAETLGKKKVQY 758
Query: 649 MSVSGITHLIELP----ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIV 704
+SV+GI +L+E+ A KVP +W K++ TKK R+H+PEV+ + + E L
Sbjct: 759 VSVAGIDYLVEVENSQGALKKVPASWRKISGTKKVSRFHTPEVVKMMRERDQQKESLAAA 818
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHI 764
C A+ L + Y F+ +QALA +D LH+L+ ++ +V+P + DD I+I
Sbjct: 819 CDTAFLRLLSDISTKYQLFRDCIQALATIDALHSLSVIAAQPGYVKPKYTDD---TIINI 875
Query: 765 CSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
GRHP+++ IL+D++VPNDT L + ++TGPNMGGKS Y+RQ+ALI IM Q+GS+
Sbjct: 876 SQGRHPMVEKILIDSYVPNDTQLSTDETRALLVTGPNMGGKSSYVRQIALICIMGQIGSY 935
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA SA L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGT
Sbjct: 936 VPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGT 995
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFT-GSVGTYHVSYLTSHKVMG 943
STHDGVAIA A LDY++ + + + LF+THY ++ + + F G + H+ + +
Sbjct: 996 STHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSRLASAFPGGELRNVHMKFTET----- 1050
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
QD+T+LY++ GV+ S+G VA+LA +P + A V + +LEA++S +
Sbjct: 1051 ---GDQGQDITFLYEIGEGVAHRSYGLNVAKLANIPAGILEVAQVKSEELEAKISRK 1104
>gi|238482111|ref|XP_002372294.1| DNA mismatch repair protein Msh3 [Aspergillus flavus NRRL3357]
gi|220700344|gb|EED56682.1| DNA mismatch repair protein Msh3 [Aspergillus flavus NRRL3357]
Length = 1386
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 343/951 (36%), Positives = 532/951 (55%), Gaps = 106/951 (11%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------------- 133
+K TP+E+QV+++K K+ D +L++EVGYKFRFFGEDA AAK L I
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 134 -AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
AHLD F +ASIP RL+VHV+RLV+AG KVGVV+Q ETAA+KA G + PFGR L+
Sbjct: 256 EAHLDR-FASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAALKAAGDNRNAPFGRKLTN 314
Query: 193 LYTKATLEAAEDVGGGE--------DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR 244
LYTK T +D+ G E G + Y++C+ + + +G+ V
Sbjct: 315 LYTKGTY--IDDMEGLEGSTASMSATGTSMATGYMLCITETN-------TKGWGNDEKVL 365
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA 304
+G+VAV+ +TGD+VY EF DGF+RS +E LL L+P E+L+ LSK TEK++ +G
Sbjct: 366 VGIVAVQPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGDLSKATEKLVQHLSGNK 425
Query: 305 SN-----VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE 359
+N +RVE A + + + V S Y + + N+ Q S ++
Sbjct: 426 TNAFGDEIRVERAPKAKTAAAESHSHVSSFYAERMKKVNATNDVQA---------SSLLQ 476
Query: 360 GIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNN 419
++N+ + A L+ I+H+ ++GLE + L F+ S M L+ANTL LE+ N
Sbjct: 477 KVLNLSEQATICLSSMIKHMSEYGLEHVFQLTKYFQHFSSRSHMLLNANTLNSLEIYHNQ 536
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
++ S G+L ++ T T +G R+LR+WV PL ++ + R+DAV E+
Sbjct: 537 TDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEEL----------- 585
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---- 535
KN + + Q +L + T D+++ + R+++ T E + +
Sbjct: 586 -------KNLERVALVEQMKCLLGRIKT------DLEKSLIRVYYGKCTRPELLTLLQTL 632
Query: 536 -MQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
M A +AG Q D + + SK + AS P ++ + L +N
Sbjct: 633 QMIAQEFAGVQSPA---DTGFSSPLISKAV-----------ASLPTILEDVVRFLDKINM 678
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
AA D S + E+ + + + + +L+ + + LG R +++++V+GI
Sbjct: 679 HAAKNDDKYEFFRESE-ETDEITEHKLGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGI 737
Query: 655 THLIEL----PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+LI + P+ KVP +W K++ TK R+H+PEV+ L Q E L C A+
Sbjct: 738 EYLIAVENKSPSIKKVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYA 797
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+FL E Y F+ +VQ+LA LDCL +LAT++ +V+P + + H +Q+ GRHP
Sbjct: 798 TFLAEISASYQSFRDSVQSLATLDCLISLATIANQPGYVKPEYTN-HTCIQVD--QGRHP 854
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++ +LLD++VPND +L +++ ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA
Sbjct: 855 MVEQLLLDSYVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPARSA 914
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
+L +LD ++TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGV
Sbjct: 915 KLGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGV 974
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKS 949
AIA A LDY++ + + LF+THY ++ + F + H+ + S GP +
Sbjct: 975 AIAQAVLDYMIRSIRSLTLFITHYQHLSSMVHSFPDHELRNVHMRFTES----GP----T 1026
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
++++T+LY+V GV+ S+G VA+LA LP I A +A+LE ++ R
Sbjct: 1027 EEEITFLYEVREGVAHRSYGLNVARLANLPAPLIELAKQKSAELEQKIHRR 1077
>gi|357162750|ref|XP_003579511.1| PREDICTED: DNA mismatch repair protein Msh3-like [Brachypodium
distachyon]
Length = 968
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 302/599 (50%), Positives = 392/599 (65%), Gaps = 80/599 (13%)
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
KN+ VE + +++ T+ G +R+F F+ V++AIL AGKQL
Sbjct: 436 KNNSDGSVEGSLFQAMNNTCTAFG---------SRLFRHW-----FVGVIEAILTAGKQL 481
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
Q+L ++ K++HS+LL+RLI TASS V+ A KLLS +NK+AADQGD+LN+
Sbjct: 482 QKLVLEDTDTVSSQRKSVHSSLLRRLISTASSSTVLSNAVKLLSCLNKDAADQGDMLNIF 541
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKV 666
I S QF E LP + +V
Sbjct: 542 IASVDQFPE--------------------------------------------LPVDRRV 557
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P NW KVNSTKKTIRYH+PE++ LD L LA EEL ++CR W +FL +FG YYA+FQA
Sbjct: 558 PSNWMKVNSTKKTIRYHTPEIVKNLDNLVLAKEELAVICRTTWHTFLMDFGKYYAQFQAT 617
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
V++LAALDCL++LATL++ N+V+P FV ++E QIHI GRHPVL+++L DNFVPNDT+
Sbjct: 618 VESLAALDCLYSLATLAKQNNYVQPNFVPENEASQIHIKDGRHPVLESLLGDNFVPNDTD 677
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L A+ EYCQI+TGPNMGGKSCYIRQVALI IMAQVGSFVPASSA LHV+DGIYTRMGASD
Sbjct: 678 LQADEEYCQIVTGPNMGGKSCYIRQVALITIMAQVGSFVPASSARLHVVDGIYTRMGASD 737
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
SIQQG STF EELNEAS IL NC+++SLVI+DELGRGTSTHDGVAIAYATL YLL+ KKC
Sbjct: 738 SIQQGTSTFYEELNEASNILHNCSSRSLVIIDELGRGTSTHDGVAIAYATLQYLLKEKKC 797
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD--------QDVTYLYK 958
+V+FVTHYPKI DI+ +F GSVG YHVSYL++ K++ D K + ++T+LYK
Sbjct: 798 IVIFVTHYPKILDIQREFEGSVGAYHVSYLSTRKLLEITDEKMEIGTETEDLGEITFLYK 857
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQE 1018
+V G S+ SFG VA LAQLP SCI RA+V+AAKL+ E+S R +N+ + L+ K +
Sbjct: 858 LVAGASDRSFGLNVALLAQLPLSCIRRASVMAAKLQEELSEREENKVGR--LMEKPAGHS 915
Query: 1019 QEAQENMPVSPESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIA 1077
+A V Y G L+ A R + +++ ++ + L++A+ IA
Sbjct: 916 PKA-----VCAAQPYQG-------LMEACRRILGDMRCVESSNDLTDTLSHLRNAKEIA 962
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 247/496 (49%), Positives = 309/496 (62%), Gaps = 79/496 (15%)
Query: 1 MGKQ-KQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSF-SPAKRKVVSSLF 58
MGKQ KQQV+SRFFAP + ++ + A+TV+F SPAKR S
Sbjct: 1 MGKQPKQQVLSRFFAPSAAPKPPAALPPN----------PPASTVAFFSPAKRARALSR- 49
Query: 59 PPKTPKKPKLS-----------------PHTLNPIPT-----PSSQ-----TTHNKKYTP 91
PKTP K+ P + P PT P+S + K YTP
Sbjct: 50 SPKTPDAKKIQTLPAPARDAVRRRLLEPPLSALPAPTAVPRLPASNPSSSGSGSGKGYTP 109
Query: 92 LEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLN 151
LEQQVV+LK ++PDVLLM+EVGY++RFFGEDA AA VLGI AH D +F+TAS+PTFRL
Sbjct: 110 LEQQVVDLKARHPDVLLMVEVGYRYRFFGEDAAAAASVLGIVAHPDRSFLTASVPTFRLG 169
Query: 152 VHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA--EDVGGG- 208
HVRRLV AG KVGV AA RGLSA+YT+AT+EA+ E GGG
Sbjct: 170 FHVRRLVAAGHKVGVAAHGGAAAGAPFA--------RGLSAVYTRATIEASAGELEGGGA 221
Query: 209 -EDGCGGESNYLVCVVDDDGN-VGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGF 266
E+G S YLVCVVD + VG+ +GF+V++GVVAVE+STG+VV+GEF DG
Sbjct: 222 PEEG----SRYLVCVVDREAEAVGR-------EGFEVKVGVVAVEVSTGEVVHGEFMDGA 270
Query: 267 LRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEV 326
RSGLEAVLL L+P E++LG PLS TEK++ AYAGPASNVRVEC R CF GALAE+
Sbjct: 271 SRSGLEAVLLGLAPVEVILGTPLSFATEKLMRAYAGPASNVRVECTPRMCFGEAGALAEL 330
Query: 327 MSLYE-------------NMGEDTLSNNEDQNMDVPEQG--NHRSAIEGIMNMPDLAVQA 371
+S +E M E + ++N +D QG N IEGIM +P+L VQA
Sbjct: 331 LSFFEKSEVNSPTIENNRQMIEISEADNSCHGIDNNRQGIDNDLHGIEGIMALPELVVQA 390
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+AL +R+LK FG+ER++C G+SFR S + EM+LSAN LQQLEVL+NNS+GS G+L
Sbjct: 391 MALIVRYLKGFGMERLICFGSSFRPFSANTEMSLSANALQQLEVLKNNSDGSVEGSLFQA 450
Query: 432 MNHTLTIYGSRLLRRW 447
MN+T T +GSRL R W
Sbjct: 451 MNNTCTAFGSRLFRHW 466
>gi|326471384|gb|EGD95393.1| DNA mismatch repair protein Msh3 [Trichophyton tonsurans CBS 112818]
Length = 1040
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 361/1059 (34%), Positives = 563/1059 (53%), Gaps = 121/1059 (11%)
Query: 14 APKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSL-------------FPP 60
+P N SS++ + R Q+ P + SPA+RK L P
Sbjct: 28 SPMPNMEPQSSASRAERFRFQSSPVQPQTDEQISPAERKKKDQLHQKFVRRLGGPDCLPS 87
Query: 61 KTPKK--PKLSP----------HTLNPIPTP---SSQTTHNKKYTPLEQQVVELKTKYPD 105
P P++ P +P P P +++ K TP+E+Q++E+K K+ D
Sbjct: 88 FNPHDGAPEVDPVAEGAASDEEEDDSPPPAPKGRAAKKAGGSKLTPMERQIMEIKNKHLD 147
Query: 106 VLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AHLDHNFMTASIPTFRLN 151
+L+I+VGYK++F+GEDA AAKVL I AHL F +AS+P RL+
Sbjct: 148 AVLLIQVGYKYQFYGEDARTAAKVLSIVCIPGKLRFDDHPSEAHLT-RFASASVPIHRLH 206
Query: 152 VHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL---EAAEDVGGG 208
VHV+RLV AG+KVGVVKQ ETAA+KA G + PF R L+ +YTKAT +A ++ G
Sbjct: 207 VHVKRLVAAGYKVGVVKQLETAALKAAGDNRNAPFVRKLTNMYTKATYIEDDAELELSGA 266
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+ G YL+C+ + G G+ GDG V++G+VAV+ +TG+V++ F DGF+R
Sbjct: 267 LEASTG---YLLCLTES-GAKGQ------GDGEKVQIGIVAVQPATGNVIHDSFEDGFMR 316
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGP-----ASNVRVECASRDCFIGGGAL 323
S +E LL +SP ELLL LS T K++ + NVR+E + A
Sbjct: 317 SEIETRLLHISPCELLLVGDLSAATNKLVQHLSKGRMTTFGDNVRIERKEKSKTAAAEAH 376
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
+ + S Y T S PE + ++ ++ +PD L+ I+HL ++G
Sbjct: 377 SHISSFYAGKLAATGS---------PEDAKASNLLDQVLKLPDDVTVCLSAMIKHLTEYG 427
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
LE + L F+S S M L+ NTL LE+ +N ++ S G+L MN T T +G RL
Sbjct: 428 LEHVFDLTKYFQSFSARSHMLLNGNTLTNLEIYQNQTDYSSKGSLFWSMNRTRTKFGQRL 487
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LRRWV PL ++ + R +AV+E+ +S S T Y L
Sbjct: 488 LRRWVGRPLLEKAKLEERTEAVTELLDSDKSTLT----------------------YNLG 525
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
S L+ + D+++ + R+++ + E + ++ K +Q + + + +
Sbjct: 526 STLSQV--RVDLEKALIRVYYGKCSRPELLTML-------KSMQSIAVSFAHVKSPADSG 576
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
S +L I A P + L+ +N+ AA + D + S + E+ R +
Sbjct: 577 FKSPILSESI--AILPTMHDDVVSYLNKINETAAKKDDKYDFFRESE-ESEEIGEHRLMI 633
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP----ANFKVPLNWAKVNSTKKT 679
+ + EL + + LG + ++++SV+GI +L+E+ A KVP +W K++ TKK
Sbjct: 634 GTIEYELKDHLKSIAETLGKKKVQYVSVAGIDYLVEVENSQGALKKVPASWRKISGTKKV 693
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
R+H+PEV+ + + E L C AA+ L + Y F+ +QALA +D LH+L
Sbjct: 694 SRFHTPEVVKMMRERDQQKESLAAACDAAFLKLLSDISTKYQLFRDCIQALATIDALHSL 753
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITG 799
+ ++ +V+P + DD I+I GRHP+++ +L+D++VPNDT L + ++TG
Sbjct: 754 SVIAAQPGYVKPKYTDD---TVINISQGRHPMVEKVLIDSYVPNDTQLSTDETRALLVTG 810
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNMGGKS Y+RQ+ALI IM Q+GS+VPA SA L +LD +YTRMGA D++ G STF+ EL
Sbjct: 811 PNMGGKSSYVRQIALICIMGQIGSYVPAESATLGMLDAVYTRMGAFDNMLAGESTFMVEL 870
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD 919
+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY++ + + + LF+THY ++
Sbjct: 871 SETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSR 930
Query: 920 IKTKFT-GSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQL 978
+ + F G + H+ + + QD+T+LY++ GV+ S+G VA+LA +
Sbjct: 931 LASAFPGGELRNVHMKFTET--------GDQGQDITFLYEIGEGVAHRSYGLNVAKLANI 982
Query: 979 PPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
P + A V + +LEA++ R + R + LSD+
Sbjct: 983 PAGILDVAQVKSQELEAKI-GRKKMGGVLRGIFQTLSDE 1020
>gi|326484465|gb|EGE08475.1| DNA mismatch repair protein Msh3 [Trichophyton equinum CBS 127.97]
Length = 1148
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 362/1062 (34%), Positives = 563/1062 (53%), Gaps = 121/1062 (11%)
Query: 11 RFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSL------------- 57
R +P N SS++ + R Q+ P + SPA+RK L
Sbjct: 133 RPSSPMPNMEPQSSASRAERFRFQSSPVQPQTDEQISPAERKKKDQLHQKFVRRLGGPDC 192
Query: 58 FPPKTPKK--PKLSP----------HTLNPIPTP---SSQTTHNKKYTPLEQQVVELKTK 102
P P P++ P +P P P +++ K TP+E+Q++E+K K
Sbjct: 193 LPSFNPHDGAPEVDPVAEGAASDEEEDDSPPPAPKGRAAKKAGGSKLTPMERQIMEIKNK 252
Query: 103 YPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AHLDHNFMTASIPTF 148
+ D +L+I+VGYK++F+GEDA AAKVL I AHL F +AS+P
Sbjct: 253 HLDAVLLIQVGYKYQFYGEDARTAAKVLSIVCIPGKLRFDDHPSEAHLTR-FASASVPIH 311
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL---EAAEDV 205
RL+VHV+RLV AG+KVGVVKQ ETAA+KA G + PF R L+ +YTKAT +A ++
Sbjct: 312 RLHVHVKRLVAAGYKVGVVKQLETAALKAAGDNRNAPFVRKLTNMYTKATYIEDDAELEL 371
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
G + G YL+C+ + G G+ GDG V++G+VAV+ +TG+V++ F DG
Sbjct: 372 SGALEASTG---YLLCLTES-GAKGQ------GDGEKVQIGIVAVQPATGNVIHDSFEDG 421
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGP-----ASNVRVECASRDCFIGG 320
F+RS +E LL +SP ELLL LS T K++ + NVR+E +
Sbjct: 422 FMRSEIETRLLHISPCELLLVGDLSAATNKLVQHLSKGRMTTFGDNVRIERKEKSKTAAA 481
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A + + S Y T S PE + ++ ++ +PD L+ I+HL
Sbjct: 482 EAHSHISSFYAGKLAATGS---------PEDAKASNLLDQVLKLPDDVTVCLSAMIKHLT 532
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
++GLE + L F+S S M L+ NTL LE+ +N ++ S G+L MN T T +G
Sbjct: 533 EYGLEHVFDLTKYFQSFSARSHMLLNGNTLTNLEIYQNQTDYSSKGSLFWSMNRTRTKFG 592
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLRRWV PL ++ + R +AV+E+ +S S T Y
Sbjct: 593 QRLLRRWVGRPLLEKAKLEERTEAVTELLDSDKSTLT----------------------Y 630
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L S L+ + D+++ + R+++ + E + ++ K +Q + + + +
Sbjct: 631 NLGSTLSQV--RVDLEKALIRVYYGKCSRPELLTML-------KSMQSIAVSFAHVKSPA 681
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
S +L I A P + L+ +N AA + D + S + E+ R
Sbjct: 682 DSGFKSPILSESI--AILPTMHDDVVSYLNKINDTAAKKDDKYDFFRESE-ESEEIGEHR 738
Query: 621 KAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP----ANFKVPLNWAKVNST 676
+ + + EL + + LG + ++++SV+GI +L+E+ A KVP +W K++ T
Sbjct: 739 LMIGTIEYELKDHLKSIAETLGKKKVQYVSVAGIDYLVEVENSQGALKKVPASWRKISGT 798
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
KK R+H+PEV+ + + E L C AA+ L + Y F+ +QALA +D L
Sbjct: 799 KKVSRFHTPEVVKMMRERDQQKESLAAACDAAFLKLLSDISTKYQLFRDCIQALATIDAL 858
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQI 796
H+L+ ++ +V+P + DD I+I GRHP+++ +L+D++VPNDT L + +
Sbjct: 859 HSLSVIAAQPGYVKPKYTDD---TVINISQGRHPMVEKVLIDSYVPNDTQLSTDETRALL 915
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
+TGPNMGGKS Y+RQ+ALI IM Q+GS+VPA SA L +LD +YTRMGA D++ G STF+
Sbjct: 916 VTGPNMGGKSSYVRQIALICIMGQIGSYVPAESATLGMLDAVYTRMGAFDNMLAGESTFM 975
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY++ + + + LF+THY
Sbjct: 976 VELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQN 1035
Query: 917 IADIKTKFT-GSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ + + F G + H+ + + QD+T+LY++ GV+ S+G VA+L
Sbjct: 1036 LSRLASAFPGGELRNVHMKFTET--------GDQGQDITFLYEIGEGVAHRSYGLNVAKL 1087
Query: 976 AQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
A +P + A V + +LEA++ R + R + LSD+
Sbjct: 1088 ANIPAGILDVAQVKSQELEAKI-GRKKMGGVLRGIFQTLSDE 1128
>gi|327305653|ref|XP_003237518.1| DNA mismatch repair protein Msh3 [Trichophyton rubrum CBS 118892]
gi|326460516|gb|EGD85969.1| DNA mismatch repair protein Msh3 [Trichophyton rubrum CBS 118892]
Length = 1145
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 344/974 (35%), Positives = 538/974 (55%), Gaps = 96/974 (9%)
Query: 74 NPIPTP---SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL 130
+P P P +++ K TP+E+Q++E+K K+ D +L+I+VGYK++F+GEDA +AAK+L
Sbjct: 218 SPPPAPKGRAAKKAGGSKLTPMERQIMEIKNKHLDAVLLIQVGYKYQFYGEDARIAAKIL 277
Query: 131 GIY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK 176
I AHL F +AS+P RL+VHV+RLV AG+KVGVVKQ ETAA+K
Sbjct: 278 SIVCIPGKLRFDEHPSEAHLTR-FASASVPIHRLHVHVKRLVAAGYKVGVVKQLETAALK 336
Query: 177 AHGPGKAGPFGRGLSALYTKATL---EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
A G + PF R L+ +YTKAT +A ++ G + G YL+C+ + G G+
Sbjct: 337 AAGDNRNAPFVRKLTNMYTKATYIEDDAELELSGALEPSTG---YLLCLTES-GAKGQ-- 390
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT 293
GDG V++G+VAV+ +TG+VVY F DGF+RS +E LL ++P ELLL LS T
Sbjct: 391 ----GDGEKVQIGIVAVQPATGNVVYDSFEDGFMRSEIETRLLHIAPCELLLVGDLSTAT 446
Query: 294 EKMLLAYAGP-----ASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
+K++ + +VR+E + A + + S Y T S
Sbjct: 447 DKLVQHLSKGRMTTFGDSVRIEWREKSQTAAAEAHSHISSFYAGKMAATGS--------- 497
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSAN 408
E S ++ ++ +PD L+ I+HL ++GLE + L F+S S M L+ N
Sbjct: 498 AEDAKASSLLDQVLKLPDDVTVCLSAMIKHLTEYGLEHVFDLTKYFQSFSARSHMLLNGN 557
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL LE+ +N ++ S G+L MN T T +G RLLRRWV PL D+ + R +AV+E+
Sbjct: 558 TLMNLEIYQNQTDYSSKGSLFWSMNRTRTKFGQRLLRRWVGRPLLDKAKLEERTEAVTEL 617
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
+S S T Y L S L+ + D+++ + R+++ +
Sbjct: 618 LDSDKSTLT----------------------YNLGSTLSQV--RVDLEKALIRVYYGKCS 653
Query: 529 PSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL 588
E + ++ K +Q + + + + S +L I A P +
Sbjct: 654 RPELLTML-------KSMQSIAVSFAHVKSPADSGFKSPILSESI--AILPTMRDDVVSY 704
Query: 589 LSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEF 648
L+ +N+ AA + D + S + E+ R + + + EL + + LG + +++
Sbjct: 705 LNKINETAAKKDDKYDFFRESE-ESEEIGEHRLMIGTIEYELKDHLKSIAETLGKKKVQY 763
Query: 649 MSVSGITHLIELP----ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIV 704
+SV+GI +L+E+ A KVP +W K++ TKK R+H+PEV+ + + E L
Sbjct: 764 VSVAGIDYLVEVENSQGALKKVPASWRKISGTKKVSRFHTPEVVKMMRERDQQKESLAAA 823
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHI 764
C A+ L + Y F+ +QALA +D LH+L+ ++ +V+P + DD I+I
Sbjct: 824 CDTAFLRLLSDISTKYQLFRDCIQALATIDALHSLSVIAAQPGYVKPKYTDD---TIINI 880
Query: 765 CSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
GRHP+++ +L+D++VPNDT L + ++TGPNMGGKS Y+RQ+ALI IM Q+GS+
Sbjct: 881 SQGRHPMVEKVLIDSYVPNDTQLSTDETRALLVTGPNMGGKSSYVRQIALICIMGQIGSY 940
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA SA L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGT
Sbjct: 941 VPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGT 1000
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFT-GSVGTYHVSYLTSHKVMG 943
STHDGVAIA A LDY++ + + + LF+THY ++ + + F G + H+ + +
Sbjct: 1001 STHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSRLASAFPGGELRNVHMRFTET----- 1055
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
QD+T+LY++ GV+ S+G VA+LA +P + A V + +LEA++ SR +
Sbjct: 1056 ---GDEGQDITFLYEIGEGVAHRSYGLNVAKLANIPTGILEVAQVKSQELEAKI-SRKKM 1111
Query: 1004 RSAKRDLLVKLSDQ 1017
R + LSD+
Sbjct: 1112 GGVLRGIFQTLSDE 1125
>gi|431907876|gb|ELK11483.1| DNA mismatch repair protein Msh3 [Pteropus alecto]
Length = 1080
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 339/935 (36%), Positives = 510/935 (54%), Gaps = 114/935 (12%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
PS++ T + YTPLE Q +E+K + D +L +E GYK+RFFGEDAE+AA+ L IY HLDH
Sbjct: 211 PSNKRTKSI-YTPLESQYIEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDH 269
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
NFMTASIP RL VHVRRLV G+K+
Sbjct: 270 NFMTASIPAHRLFVHVRRLVAKGYKLD--------------------------------- 296
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ V E ++YL+C+ ++ N+ + + G + +G+V V+ +TG+VV
Sbjct: 297 ----DAVNVDEIMTDTSTSYLLCICENKENLKEKKKG------SIFIGIVGVQPATGEVV 346
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D RS LE +LSL P ELLL LS+QTE ML+ A S +RVE
Sbjct: 347 FDSFQDSASRSELETRILSLQPVELLLPSHLSEQTE-MLIHRATAVSVRDDRIRVERMDN 405
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y N DV + +S GI+N+ + +LA
Sbjct: 406 MYFEYSHAFQMVTEFYSN--------------DVVDIKGSQS-FSGIINLEKPVICSLAA 450
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
IR+LK+F LE+++ +F+ LSG ME MT++ TL+ LE+L+N ++ G+L +++
Sbjct: 451 IIRYLKEFNLEKVLSKPKNFKQLSGDMEFMTINGTTLRNLEILQNQTDKKTKGSLFWVLD 510
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L++WVT PL I+ RLDAVSE+ S S
Sbjct: 511 HTKTSFGRRKLKKWVTQPLLKLRKINDRLDAVSEVLHSESS------------------- 551
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PDI+RG+ I+H+ + EF +++A+ H+
Sbjct: 552 -------VFDQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKALY---------HLKS 595
Query: 554 EYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
E++ + + H S LL+ IL P ++ L +N++AA GD L
Sbjct: 596 EFQALIPAVNSHVQSDLLQTFILEI--PELLSPVEHYLKILNEQAAKIGDKTELFK-DLS 652
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLN 669
F + R + +Q +++ + RK L + ++++VSG +IE+ A +P +
Sbjct: 653 DFPLIKRRKDEIQEVTDKIQIHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPAD 712
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W KV STK R+HSP V+ L E+L + C A W FL+ F +Y AV
Sbjct: 713 WIKVGSTKAVSRFHSPFVVENYRHLNQLREQLVLDCNAEWLDFLENFSEHYHSLCKAVHH 772
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNL 787
LA +DC+ +LA +++ ++ RP E +I I +GRHPV+D +L D +VPN TNL
Sbjct: 773 LATIDCIFSLAKVAKQGDYCRPTL---QEERKIMIKNGRHPVIDVLLGEQDQYVPNSTNL 829
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + +++GI+TRMGA+D+
Sbjct: 830 SGDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVNGIFTRMGAADN 889
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
I +G STF+EEL + + I+R T++SLVI+DELGRGTSTHDG+AIAYATL++ + K +
Sbjct: 890 IYKGHSTFMEELTDTAEIIRKATSRSLVIMDELGRGTSTHDGIAIAYATLEHFIRDVKSL 949
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK--VMGPMDSKSDQDVTYLYKVVPGVSE 965
LFVTHYP + +++ ++ VG YH+ +L + P + + + VT+LY++ G++
Sbjct: 950 TLFVTHYPPVCELEKSYSQQVGNYHMGFLVNENESKQDPGEEEVPEFVTFLYQITRGIAA 1009
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA +P + +A + +LE V+ +
Sbjct: 1010 RSYGLNVAKLADVPEEILKKAASKSKELEGLVNMK 1044
>gi|190359869|sp|A6R7S1.2|MSH3_AJECN RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
Length = 1166
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 337/956 (35%), Positives = 525/956 (54%), Gaps = 92/956 (9%)
Query: 75 PIPTPS--SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI 132
P+P + T K TP+E+Q++++K K+ D LL++EVGYKFRFFGEDA +AAK L I
Sbjct: 236 PVPQKGRGGKKTTTGKLTPMERQIIDIKKKHMDTLLVVEVGYKFRFFGEDARVAAKELSI 295
Query: 133 Y--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH 178
AHL F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA
Sbjct: 296 VCIPGKLRFDEHPSEAHLSR-FASASIPVHRLHVHVKRLVEAGYKVGVVRQLETAALKAA 354
Query: 179 GPGKAGPFGRGLSALYTKAT----LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRN 234
G + PF R L+ LYTK T +E E+ G + YL+C+ + +
Sbjct: 355 GENRNAPFVRKLTNLYTKGTYIDDVEGLEESSGNSGSASTSTGYLLCMAESNAKG----- 409
Query: 235 GVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE 294
+G+ V +G+VAV+ +TGDV+Y +F DGF+RS +E LL ++P E L+ +SK TE
Sbjct: 410 --WGNDEKVHVGIVAVQPATGDVIYDDFEDGFMRSEIEMRLLHIAPCEFLIVGEMSKATE 467
Query: 295 KMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVP 349
K++ +G +NV RVE S+ + + V S Y N + DV
Sbjct: 468 KLVQHLSGSKTNVFGDKIRVERVSKSKTAAAESHSHVSSFYAGR-----MNAKGTTGDVA 522
Query: 350 EQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANT 409
+ +E ++ +P+ L+ I+H+ +FGLE + L F+ S M L+ NT
Sbjct: 523 AS----NLLEKVLTLPEDVTICLSSMIKHMSEFGLEYVFDLTKYFQPFSARSHMLLNGNT 578
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+ +N ++ + G+L ++ T T +G RLLR+WV PL D+ + R+ AV E+
Sbjct: 579 LTNLEIYQNQTDHTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKTELEERVSAVEEL- 637
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
++ T+ + +LS + D+++ + RI++ T
Sbjct: 638 -----------------QDPSKTVQIERLKGLLSKI------RADLEKSLIRIYYGRCTR 674
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
E + V+Q + + +H+ +S T+ +A+ A+ PA+ L
Sbjct: 675 PELLTVLQTLQLIADEY--VHLKSPADLGFSSPTITTAI-------AALPAIRDDVVTYL 725
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ +N+EAA + D + E+ + + + L + + LG + +++
Sbjct: 726 NKINEEAAKKDDKY-CFFREVEETDEITESNLGIADVQHRLQEHCAVAAEILGKKKVQYT 784
Query: 650 SVSGITHLIEL---PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+V+GI +LIE+ P N K VP +W K++ TKK R+H+PEV+ + + E L C
Sbjct: 785 TVAGIEYLIEVENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQYMRERDQYKEALAAAC 844
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHIC 765
A+ + L + Y F+ + ALA LDCL +LA ++ +++P + D +I +
Sbjct: 845 DKAFHALLADISTKYQSFRDCILALATLDCLLSLANIASQPGYIKPAYTD---KTRISVQ 901
Query: 766 SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
GRHP+++ +LLD +VPND LH + ++TGPNMGGKS Y+RQVALI IM Q+GS+V
Sbjct: 902 RGRHPMVEQLLLDTYVPNDIELHTDETRALLVTGPNMGGKSSYVRQVALISIMGQIGSYV 961
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PA SA L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTS
Sbjct: 962 PADSATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTS 1021
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGP 944
THDGVAIA A LDY++ + + + LF+THY ++ + +F G + H+ + S
Sbjct: 1022 THDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPKGELRNVHMKFTES-----G 1076
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
MD QD+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1077 MDG---QDITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELEEKIRKK 1129
>gi|328872398|gb|EGG20765.1| mutS like protein [Dictyostelium fasciculatum]
Length = 1237
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 345/977 (35%), Positives = 525/977 (53%), Gaps = 95/977 (9%)
Query: 65 KPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAE 124
K K P + +S+ KYTPLEQQ V++K +YPD +LM+E GYK++FFG DAE
Sbjct: 283 KTKKKPAAAGKGKSSTSKAAAKVKYTPLEQQYVDIKKQYPDTVLMVECGYKYKFFGNDAE 342
Query: 125 MAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
+A KVL IY+++ NF+ ASIPT RL H+RRLV AG+KVGVV+Q ETAA+KA K G
Sbjct: 343 VANKVLNIYSYVVKNFLNASIPTVRLYHHLRRLVQAGYKVGVVEQIETAALKAVSDSKGG 402
Query: 185 PFGRGLSALYTKATL--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD 242
PF R L+ LYT +T + ++ D NYLV +D + KI D
Sbjct: 403 PFERKLTRLYTTSTFIDDQVDESNNTLDFSNISPNYLVAFYED-TQIKKI------DSPT 455
Query: 243 VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQ---------- 292
R+ VA+ +STG+++Y F+D LRS LE L L P E+LL P KQ
Sbjct: 456 TRISFVAISVSTGEIIYDSFDDDLLRSHLETRLTHLKPTEILLP-PEYKQKQDDGTDHFI 514
Query: 293 -------TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQN 345
T K + Y +NVRV+ + +++ + LY D NN++
Sbjct: 515 YSKFTRLTSKTIKQYCK-TNNVRVQLMKESLYDKDLSVSNITDLY-----DQFENNQET- 567
Query: 346 MDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG-LERIMCLGASFRSLSGSMEMT 404
++A+ + + + L++ +LK F I+ + ++F++ S +
Sbjct: 568 ---------QTALSAALTLDSSQIVCLSVLTTYLKDFNQFNSILKVASNFKAFKISNHLI 618
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L +T+ LE+L+N SE G+L +MN T TI G RL W+ PL D LI R ++
Sbjct: 619 LPRSTIDNLEILQNEDTKSEKGSLYWVMNRTQTIAGKRLFLNWICKPLIDLELIKLRQES 678
Query: 465 VSEIAESM-GSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIF 523
V E+ + ++ E +G ++ SS+ PD+QR ++++F
Sbjct: 679 VKELLNCIVERVKSIELIGS----------------FLKSSI-------PDLQRNLSKVF 715
Query: 524 HRT-ATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPA-- 580
+++ P +F++ M++ L + GE++ KV LK L A
Sbjct: 716 YKSQCKPKDFLSTMKSFQRLSTLLSDVSRLGEFKSKV---------LKELFGINDEWAGE 766
Query: 581 -VIGKAAKLLSTVNKEAADQG--DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMC 637
V K+ +T+ + D+ + + ++ ++ + ++ +++LD +
Sbjct: 767 RVEKFRVKVDTTLKAISHDEATSNCKENIWTDETRYPKLVETKAHIKEIQDKLDQYLKKV 826
Query: 638 RKQLGMRNLEFMSVSGI--THLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
RK++G LE++ + +LIELP FK VP +W K+N+T+K RYH+P ++ + L
Sbjct: 827 RKEVGKPTLEYLHQPRLHLEYLIELPVAFKQVPKDWLKINATQKLSRYHTPYIIENVKLL 886
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
A E LT++ AW FL + G Y + + + LA LDCL +LA L + +V P
Sbjct: 887 AQHRERLTLLANEAWLDFLGKVGNDYTLYSSMITKLALLDCLMSLAKLGMSAGYVLPEL- 945
Query: 755 DDHEPVQIHICSGRHPVLDTILLD---NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQ 811
EP I++ GRHP+++ L ++VPN L + E IITGPNMGGKS +IRQ
Sbjct: 946 -SSEP-GINVVEGRHPIVEMTLGQKGGSYVPNSIKLSSAEERAMIITGPNMGGKSSFIRQ 1003
Query: 812 VALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTA 871
+LI IMAQ+GS+VPA S + V D IYTRMGA D+I+ G STF EL E S IL T
Sbjct: 1004 TSLIVIMAQMGSYVPAESCTMGVFDAIYTRMGARDNIEHGSSTFFVELQETSQILAEATP 1063
Query: 872 QSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTY 931
++LVI+DELGRGTSTHDGVAIAY++L Y++E KC LFVTHYP ++ I+ + +V Y
Sbjct: 1064 RTLVILDELGRGTSTHDGVAIAYSSLLYIVEQLKCFCLFVTHYPLLSQIENMYPQNVSNY 1123
Query: 932 HVSYLTSHKVMGPMDSKSDQD--VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVI 989
H+S+L + P + + Q V +LYKVV G +++S+G VA LA LP I AT+
Sbjct: 1124 HMSFLEEQQ-NNPDNGQYQQQPKVIFLYKVVRGAAKNSYGINVATLANLPQPVIQSATLK 1182
Query: 990 AAKLEAEVSSRVQNRSA 1006
+ +L+ ++ ++ N +
Sbjct: 1183 SNELKQSITKKIFNNDS 1199
>gi|350638948|gb|EHA27303.1| hypothetical protein ASPNIDRAFT_50853 [Aspergillus niger ATCC 1015]
Length = 1107
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 337/942 (35%), Positives = 526/942 (55%), Gaps = 101/942 (10%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 206 KLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEHPSE 265
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHLD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ L
Sbjct: 266 AHLD-RFASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAALKAAGDNRNAPFVRKLTNL 324
Query: 194 YTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
YTK T ++ AE +GG G + YL+C+ + + +G+ V++G+V
Sbjct: 325 YTKGTYIDDAEGLGGPMPAASGGASPATGYLLCITETNAKG-------WGNDEKVQVGIV 377
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TGD+VY +F DGF+RS +E LL ++P ELL+ LSK TEK++ +G NV
Sbjct: 378 AVQPATGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGELSKATEKLVQHLSGSKLNVF 437
Query: 308 ----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
RVE + + + V S Y + + ++ Q + ++ ++N
Sbjct: 438 GDKTRVERVLKSKTAAAESHSHVSSFYAGKMKTASAADDAQASSL---------LQKVLN 488
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I H+K++GLE + L F+ S M L+ NTL LE+ +N ++ +
Sbjct: 489 LPEQVTICLSSMIEHMKEYGLEYVFELTKYFQHFSSRSHMLLNGNTLMSLEIYQNQTDHT 548
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L ++ T T +G R+LR+WV PL D++ + R++AV E+
Sbjct: 549 TKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEEL--------------- 593
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
KN + T++ + +L V + D+++ + RI Y G
Sbjct: 594 ---KNPEKTVMVERLKGLLGKVKS------DLEKSLIRI------------------YYG 626
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
K +Q + + + S + I P ++ L +N AA D
Sbjct: 627 KTMQMIAQEFSDVKSPADTGFASTAINEAITCL--PTILEDVVAFLDKINMHAAKSDDKY 684
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL--- 660
+ + +++ + + S + EL+ ++ ++LG + +E+ SV+GI +LIE+
Sbjct: 685 AFFREAE-ETEDISDQKLGIASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVENS 743
Query: 661 PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
A+ K VP +W KV+ TKK R+H+PEV+ + Q E L C A+ S L +
Sbjct: 744 SASIKRVPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIATK 803
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
Y F+ +VQALA LDCL ALAT++ +V+P + D H +Q+ GRHP+++ +LLD+
Sbjct: 804 YQPFRDSVQALATLDCLIALATIASQPGYVKPEYTD-HTCIQVD--QGRHPMVEQLLLDS 860
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
+VPND +L +++ ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA+L +LD ++
Sbjct: 861 YVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLDAVF 920
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY
Sbjct: 921 TRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDY 980
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
++ + + LF+THY ++ + F + H+ + S + +D+++T+LY+
Sbjct: 981 MVRSIRSLTLFITHYQHLSSMDHSFADQELRNVHMRFTES-------GTGTDEEITFLYE 1033
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
V GV+ S+G VA+LA LP + +A + +LE ++ R
Sbjct: 1034 VGEGVAHRSYGLNVARLANLPGPLLDQARQKSKELEEKIRRR 1075
>gi|225556119|gb|EEH04409.1| DNA mismatch repair protein msh3 [Ajellomyces capsulatus G186AR]
Length = 1166
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 336/956 (35%), Positives = 524/956 (54%), Gaps = 92/956 (9%)
Query: 75 PIPTPS--SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI 132
P+P + T K TP+E+Q++++K K+ D LL++EVGYKFRFFGEDA +AAK L I
Sbjct: 236 PVPQKGRGGKRTTTGKLTPMERQIIDIKKKHMDTLLVVEVGYKFRFFGEDARVAAKELSI 295
Query: 133 Y--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH 178
AHL F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA
Sbjct: 296 VCIPGKLRFDEHPSEAHLT-RFASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAALKAA 354
Query: 179 GPGKAGPFGRGLSALYTKAT----LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRN 234
G + PF R L+ LYTK T +E E+ G + YL+C+ + +
Sbjct: 355 GENRNAPFVRKLTNLYTKGTYIDDVEGLEESSGNSGSASTSTGYLLCMTESNAKG----- 409
Query: 235 GVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE 294
+G+ V +G+VAV+ +TGDV+Y +F DGFLRS +E LL ++P E L+ +SK T+
Sbjct: 410 --WGNDEKVHVGIVAVQPATGDVIYDDFEDGFLRSEIEMRLLHIAPCEFLIVGEMSKATK 467
Query: 295 KMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVP 349
K++ +G +NV RVE S+ + + V S Y N + DV
Sbjct: 468 KLVQHLSGSKTNVFGDKVRVERVSKSKTAAAESHSHVSSFYAGR-----MNAKGTTGDVA 522
Query: 350 EQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANT 409
+ +E ++ +P+ L+ I+H+ +FGLE + L F+ S M L+ NT
Sbjct: 523 AS----NLLEKVLKLPEDVTICLSSMIKHMSEFGLEYVFDLTKYFQPFSARSHMLLNGNT 578
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+ +N ++ + G+L ++ T T +G RLLR+WV PL D+ + R+ AV E+
Sbjct: 579 LTNLEIYQNQTDHTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKTELEERVSAVEEL- 637
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
++ T+ + +LS + D+++ + RI++ T
Sbjct: 638 -----------------QDPSKTVQIERLKGLLSKI------RADLEKSLIRIYYGRCTR 674
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
E + V+Q + + +H+ +S T+ +A+ A+ PA+ L
Sbjct: 675 PELLTVLQTLQLIADEY--VHLKSPADLGFSSPTITTAI-------AALPAIRDDVVTYL 725
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ +N EAA + D + E+ + + + L + + LG + +++
Sbjct: 726 NKINAEAAKKDDKY-CFFREVEETDEITESNLGIADVQHRLQEHCTVAAEILGKKKVQYT 784
Query: 650 SVSGITHLIEL---PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+V+GI +LIE+ P N K VP +W K++ TKK R+H+PEV+ + + E L C
Sbjct: 785 TVAGIEYLIEVENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQYMRERDQYKEALAAAC 844
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHIC 765
A+ + L + Y F+ + ALA LDCL +LA ++ +++P + D ++ +
Sbjct: 845 DKAFHALLADISTKYQSFRDCILALATLDCLLSLANIASQPGYIKPAYTD---KTRVSVQ 901
Query: 766 SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
GRHP+++ +LLD +VPND LH + ++TGPNMGGKS Y+RQVALI IM Q+GS+V
Sbjct: 902 RGRHPMVEQLLLDTYVPNDIELHTDETRALLVTGPNMGGKSSYVRQVALISIMGQIGSYV 961
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PA SA L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTS
Sbjct: 962 PADSATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTS 1021
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFT-GSVGTYHVSYLTSHKVMGP 944
THDGVAIA A LDY++ + + + LF+THY ++ + +F G + H+ + S
Sbjct: 1022 THDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPGGELRNVHMKFTES-----G 1076
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
MD QD+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1077 MDG---QDITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELEEKIRKK 1129
>gi|119482682|ref|XP_001261369.1| DNA mismatch repair protein Msh3, putative [Neosartorya fischeri NRRL
181]
gi|190359847|sp|A1DCB2.1|MSH3_NEOFI RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|119409524|gb|EAW19472.1| DNA mismatch repair protein Msh3, putative [Neosartorya fischeri NRRL
181]
Length = 1117
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 343/923 (37%), Positives = 523/923 (56%), Gaps = 98/923 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TPLE+QV+E+K K+ D +L+IEVGYKFRFFGEDA +AAK L I AH
Sbjct: 205 TPLEKQVIEIKRKHMDTVLVIEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEHPSEAH 264
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL+VHV+RLV+AG+KVGVV+Q ETAA+KA G + PF R L+ LYT
Sbjct: 265 LDR-FASASIPVHRLHVHVKRLVSAGYKVGVVRQLETAALKAVGDNRNAPFSRKLTNLYT 323
Query: 196 KAT-LEAAEDVGGGEDGCGG----ESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
K T ++ E + G G + Y++C+ + + +G+ V +G+VAV
Sbjct: 324 KGTYVDDVEGLDGATPAASGGASPATGYMLCITETNAKG-------WGNDEKVHVGIVAV 376
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN---- 306
+ +TGD++Y +F DGF+RS +EA LL ++P EL++ LSK TEK++ +G N
Sbjct: 377 QPNTGDIIYDDFEDGFMRSEVEARLLHIAPCELVIVGELSKATEKLVQHLSGSKLNTFGD 436
Query: 307 -VRVECASRDCFIGGGALAEVMSLYENMGEDTL--SNNEDQNMDVPEQGNHRSAIEGIMN 363
VRV+ ++ A+AE S N L +N D D P + ++ ++N
Sbjct: 437 KVRVDRVAKK----KTAVAESHSHVANFYAAKLKAANTAD---DAPAS----NLLQKVLN 485
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I HL ++GLE I L F+ S M L+ANTL LE+ +N ++ S
Sbjct: 486 LPEQVTVCLSAMIEHLTEYGLEHIFELTKYFQHFSSRSHMLLNANTLVSLEIYQNQTDHS 545
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L ++ T T +G RLLR+WV PL D+ + R++AV E+
Sbjct: 546 AKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKERLEERVNAVEEL--------------- 590
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
K+ D T+ + +L + + D+++ + RI++ T E + V+Q +
Sbjct: 591 ---KSPDRTVQVERLKILLGRIKS------DLEKNLIRIYYGKCTRPELLTVLQTL---- 637
Query: 544 KQLQQLHIDGEYREK--VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
+ + Q ++D + E TS L A+ A P+++ K L+ +N AA D
Sbjct: 638 QTIAQEYVDVKTPEDSGFTSPILGEAI-------ARVPSILEDVVKFLNKINMHAARNDD 690
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL- 660
S + ++ + + S + EL+ ++ L + +++ SGI +LIE+
Sbjct: 691 KYEFFRESE-ETEGISEHKCGIASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLIEVE 749
Query: 661 ---PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
A +VP +W KV+ TKK R+H+PEV+ L Q E L C A+ + L E
Sbjct: 750 NTAAAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLAEIA 809
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y F+ +VQ+LA LDCL +LA ++ +V+P + D IH+ GRHP+++ +LL
Sbjct: 810 TNYQSFRDSVQSLATLDCLLSLAAIASQPGYVKPEYTDQ---TCIHVEQGRHPMVEQLLL 866
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D++VPND +L ++R ++TGPNMGGKS Y+RQ+ALI IMAQ+GS+VPA SA+L +LD
Sbjct: 867 DSYVPNDIDLDSDRTRALLVTGPNMGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLDA 926
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
++TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A L
Sbjct: 927 VFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVL 986
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
DY++ + + LF+THY ++++ F + H+ + S S D+++T+L
Sbjct: 987 DYMVRTIRSLTLFITHYQHLSNMAQSFPNHELRNVHMRFTES-------GSGKDEEITFL 1039
Query: 957 YKVVPGVSESSFGFKVAQLAQLP 979
Y+V GV+ S+G VA+LA LP
Sbjct: 1040 YEVGEGVAHRSYGLNVARLANLP 1062
>gi|325090698|gb|EGC44008.1| DNA mismatch repair protein [Ajellomyces capsulatus H88]
Length = 1166
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 336/956 (35%), Positives = 524/956 (54%), Gaps = 92/956 (9%)
Query: 75 PIPTPS--SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI 132
P+P + T K TP+E+Q++++K K+ D LL++EVGYKFRFFGEDA +AAK L I
Sbjct: 236 PVPQKGRGGKKTTTGKLTPMERQIIDIKKKHMDTLLVVEVGYKFRFFGEDARVAAKELSI 295
Query: 133 Y--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH 178
AHL F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA
Sbjct: 296 VCIPGKLRFDEHPSEAHLT-RFASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAALKAA 354
Query: 179 GPGKAGPFGRGLSALYTKAT----LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRN 234
G + PF R L+ LYTK T +E E+ G + YL+C+ + +
Sbjct: 355 GENRNAPFVRKLTNLYTKGTYIDDVEGLEESSGNSGSASTSTGYLLCMTESNAKG----- 409
Query: 235 GVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE 294
+G+ V +G+VAV+ +TGDV++ +F DGF+RS +E LL ++P E L+ +SK TE
Sbjct: 410 --WGNDEKVHVGIVAVQPATGDVIHDDFEDGFMRSEIEMRLLHIAPCEFLIVGEMSKATE 467
Query: 295 KMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVP 349
K++ +G +NV RVE S+ + + V S Y N + DV
Sbjct: 468 KLVQHLSGSKTNVFGDKVRVERVSKSKTAAAESHSHVSSFYAGR-----MNAKGTTGDVA 522
Query: 350 EQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANT 409
+ +E ++ +P+ L+ I+H+ +FGLE + L F+ S M L+ NT
Sbjct: 523 AS----NLLEKVLKLPEDVTICLSSMIKHMSEFGLEYVFDLTKYFQPFSARSHMLLNGNT 578
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+ +N ++ + G+L ++ T T +G RLLR+WV PL D+ + R+ AV E+
Sbjct: 579 LTNLEIYQNQTDHTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKTELEERVSAVEEL- 637
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
++ T+ + +LS + D+++ + RI++ T
Sbjct: 638 -----------------QDPSKTVQIERLKGLLSKI------RADLEKSLIRIYYGRCTR 674
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
E + V+Q + + +H+ +S T+ +A+ A+ PA+ L
Sbjct: 675 PELLTVLQTLQLIADEY--VHLKSPADLGFSSPTITTAI-------AALPAIRDDVVTYL 725
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ +N EAA + D + E+ + + + L + + LG + +++
Sbjct: 726 NKINAEAAKKDDKY-CFFREVEETDEITESNLGIADVQHRLQEHCAVAAEILGKKKVQYT 784
Query: 650 SVSGITHLIEL---PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+V+GI +LIE+ P N K VP +W K++ TKK R+H+PEV+ + + E L C
Sbjct: 785 TVAGIEYLIEVENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQYMRERDQYKEALAAAC 844
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHIC 765
A+ + L + Y F+ + ALA LDCL +LA ++ +++P + D +I +
Sbjct: 845 DKAFHALLADISTKYQSFRDFILALATLDCLLSLANIASQPGYIKPAYTD---KTRISVQ 901
Query: 766 SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
GRHP+++ +LLD +VPND LH + ++TGPNMGGKS Y+RQVALI IM Q+GS+V
Sbjct: 902 RGRHPMVEQLLLDTYVPNDIELHTDETRALLVTGPNMGGKSSYVRQVALISIMGQIGSYV 961
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PA SA L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTS
Sbjct: 962 PADSATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTS 1021
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGP 944
THDGVAIA A LDY++ + + + LF+THY ++ + +F G + H+ + S
Sbjct: 1022 THDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPKGELRNVHMKFTES-----G 1076
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
MD QD+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1077 MDG---QDITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELEEKIRKK 1129
>gi|70987164|ref|XP_749062.1| DNA mismatch repair protein Msh3 [Aspergillus fumigatus Af293]
gi|74668576|sp|Q4WGB7.1|MSH3_ASPFU RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|190359852|sp|B0YCF6.1|MSH3_ASPFC RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|66846692|gb|EAL87024.1| DNA mismatch repair protein Msh3 [Aspergillus fumigatus Af293]
gi|159123167|gb|EDP48287.1| DNA mismatch repair protein Msh3, putative [Aspergillus fumigatus
A1163]
Length = 1123
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 340/923 (36%), Positives = 524/923 (56%), Gaps = 98/923 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TPLE+QV+E+K K+ D +L++EVGYKFRFFGEDA +AAK L I AH
Sbjct: 211 TPLEKQVIEIKRKHMDTILVVEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEHPSEAH 270
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL+VHV+RLV+AG+KVGVV+Q ETAA+KA G + PF R L+ LYT
Sbjct: 271 LDR-FASASIPVHRLHVHVKRLVSAGYKVGVVRQLETAALKAAGDNRNAPFSRKLTNLYT 329
Query: 196 KAT-LEAAEDVGGGEDGCGG----ESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
K T ++ E + G G + Y++C+ + + +G+ V +G+VAV
Sbjct: 330 KGTYVDDVEGLDGATPAASGGASPATGYMLCITETNAKG-------WGNDEKVHVGIVAV 382
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN---- 306
+ +TGDV+Y +F+DGF+RS +E LL ++P EL++ LSK TEK++ +G N
Sbjct: 383 QPNTGDVIYDDFDDGFMRSEVETRLLHIAPCELVIVGELSKATEKLVQHLSGSKLNTFGD 442
Query: 307 -VRVECASRDCFIGGGALAEVMSLYENMGEDTL--SNNEDQNMDVPEQGNHRSAIEGIMN 363
VRV+ ++ A+AE S N L +N D D P + ++ ++N
Sbjct: 443 KVRVDRVAKK----KTAVAESHSHVANFYAAKLKAANTAD---DAPAS----NLLQKVLN 491
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I+HL ++GLE I L F+ S M L+ANTL LE+ +N ++ S
Sbjct: 492 LPEQVTVCLSAMIQHLTEYGLEHIFELTKYFQHFSSRSHMLLNANTLVSLEIYQNQTDHS 551
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L ++ T T +G RLLR+WV PL D+ + R++AV E+
Sbjct: 552 AKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKERLEERVNAVEEL--------------- 596
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
K+ + T+ + +L + + D+++ + RI++ T E + V+Q +
Sbjct: 597 ---KSPERTVQAERLKIMLGKIKS------DLEKNLIRIYYGKCTRPELLTVLQTL---- 643
Query: 544 KQLQQLHIDGEYREK--VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
+ + Q ++D + + TS L A+ A P+++G K L+ +N AA D
Sbjct: 644 QTIAQEYVDVKTPQDSGFTSPILGEAI-------ARVPSILGDVVKFLNKINMHAARNDD 696
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL- 660
S + ++ + + S + EL+ ++ L + +++ SGI +LIE+
Sbjct: 697 KYEFFRESE-ETEGISEHKCGIASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLIEVE 755
Query: 661 ---PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
A +VP +W KV+ TKK R+H+PEV+ L Q E L C A+ + L E
Sbjct: 756 NSAAAIKRVPASWVKVSGTKKVSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLAEIA 815
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y F+ VQ+LA LDCL +LA ++ +V+P + D IH+ GRHP+++ +LL
Sbjct: 816 SNYQSFRDCVQSLATLDCLLSLAAIASQPGYVKPEYTDQ---TCIHVEQGRHPMVEQLLL 872
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D++VPND +L +++ ++TGPNMGGKS Y+RQ+ALI IMAQ+GS+VPA SA+L +LD
Sbjct: 873 DSYVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLDA 932
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
++TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A L
Sbjct: 933 VFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVL 992
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
DY++ + + LF+THY ++++ F + H+ + S S D+++T+L
Sbjct: 993 DYMVRTIRSLTLFITHYQHLSNMAQSFPDHELRNVHMRFTES-------GSGKDEEITFL 1045
Query: 957 YKVVPGVSESSFGFKVAQLAQLP 979
Y+V GV+ S+G VA+LA LP
Sbjct: 1046 YEVGEGVAHRSYGLNVARLANLP 1068
>gi|115395500|ref|XP_001213513.1| hypothetical protein ATEG_04335 [Aspergillus terreus NIH2624]
gi|121739057|sp|Q0CPP9.1|MSH3_ASPTN RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|114193082|gb|EAU34782.1| hypothetical protein ATEG_04335 [Aspergillus terreus NIH2624]
Length = 1117
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 334/941 (35%), Positives = 529/941 (56%), Gaps = 94/941 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E+Q++++K K+ D +L ++VGYKFRFFGEDA +AAK L I AH
Sbjct: 207 TPMERQIIDMKRKHMDKILAVQVGYKFRFFGEDARVAAKELSIVCIPGKFRFDEHPSEAH 266
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP +L+VHV+RL+ AG KVG+V+Q ETAA+KA G + PF R L+ +YT
Sbjct: 267 LD-RFASASIPVHKLHVHVKRLITAGHKVGIVRQIETAALKAAGDNRNAPFVRKLTNVYT 325
Query: 196 KATLEAAEDVGGGEDGCGGESN-----YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
K T +D+ G E G Y++C+ + + +G+ V +G+VAV
Sbjct: 326 KGTY--IDDMEGLEGPTAGAGTTAATGYMLCITETNAKG-------WGNDEKVHVGIVAV 376
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV--- 307
+ +TGD+V+ +F DGF+RS +E LL L+P ELL+ LSK ++K++ AG NV
Sbjct: 377 QPATGDIVFDDFEDGFMRSEIETRLLHLAPCELLIVGDLSKASDKLVQHLAGSKMNVFGD 436
Query: 308 --RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP 365
RVE ++ A + V S Y + + ++++ Q ++ ++ ++N+P
Sbjct: 437 KVRVERTTKSKTAAAEAHSHVSSFYADKVKSANASDDTQASNL---------LQKVLNLP 487
Query: 366 DLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEY 425
+ L+ I+H+ ++GLE + L F+ S M L+ NTL LE+ +N ++ S
Sbjct: 488 EQVSICLSSMIKHMTEYGLEHVFDLTKYFQHFSSRSHMLLNGNTLMSLEIYQNQTDHSSR 547
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
G+L ++ T T +G RLLR+WV PL D++ + R++A+ E+ +SM
Sbjct: 548 GSLFWTLDRTQTRFGQRLLRKWVGRPLLDKSKLEERVNAIEEL-KSM------------- 593
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSP-DIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
V +VE L VL G++ D+++ + RI++ T E + +Q + +
Sbjct: 594 ---EKVAMVER-----LKGVL---GKAKCDLEKILIRIYYGRCTRPELLTGLQTLQMIAQ 642
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+ + T+ L+ A+ AS P ++ L+ +N AA D
Sbjct: 643 EFGD--VKSPEDSGFTTPILNEAI-------ASLPTILEDVLSFLNKINLHAARNDDKYE 693
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
+ + +++ + + S + EL ++ K LG +++++V+GI +LIE+ N
Sbjct: 694 FFREAE-ETEDISEHKLGIASVEHELREYQSVAGKILGRSKIQYVTVAGIDYLIEVENNS 752
Query: 665 ----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+VP +W K++ TKK R+HSPEV+ L Q E L C A+ S L E Y
Sbjct: 753 SYLKRVPASWVKISGTKKLSRFHSPEVIKLLRQRDQHKEALAAACDHAYASLLAEIAANY 812
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
F+ VQ+LA +DCL +L++++ +V+P + D+ IH+ GRHP+++ +LLD++
Sbjct: 813 QPFRDCVQSLATIDCLLSLSSIANQPGYVKPEYADN---TCIHVEQGRHPMVEQLLLDSY 869
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPND NL +E ++TGPNMGGKS Y+RQ+ALI IM QVGS+VPA SA+L +LD ++T
Sbjct: 870 VPNDINLDSEETRALLVTGPNMGGKSSYVRQIALIAIMGQVGSYVPAQSAKLGMLDAVFT 929
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY+
Sbjct: 930 RMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYM 989
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
+ + + LF+THY ++ + F + H+ + S S D+++T+LY+V
Sbjct: 990 VRSLRSLTLFITHYQHLSSMVHSFPNHELRNVHMRFTES-------GSGQDEEITFLYEV 1042
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA LP I A +A+LE ++ R
Sbjct: 1043 GEGVAHRSYGLNVARLANLPVPLIEVAKQKSAELEQKIRRR 1083
>gi|296805561|ref|XP_002843605.1| DNA mismatch repair protein Msh3 [Arthroderma otae CBS 113480]
gi|238844907|gb|EEQ34569.1| DNA mismatch repair protein Msh3 [Arthroderma otae CBS 113480]
Length = 1134
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 333/941 (35%), Positives = 517/941 (54%), Gaps = 95/941 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---------------- 133
TP+E+Q++E+K K+ D +L+I+VGYKF+F+GEDA +AAKVL I
Sbjct: 223 TPMEKQILEIKNKHLDAVLLIQVGYKFQFYGEDARIAAKVLSIVCIPGKLRFDELTTDPS 282
Query: 134 -AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
AHL F +AS+P RL+VHV+RLV AG+KVGVVKQ ETAA+KA G + PF R L+
Sbjct: 283 EAHLTR-FASASVPIHRLHVHVKRLVTAGYKVGVVKQLETAALKAAGDNRNAPFVRKLTN 341
Query: 193 LYTKATL---EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
+YTKAT +A ++ G + G YL+C+ + G G+ G+G V++G+VA
Sbjct: 342 MYTKATYVEDDAENELSGALEPSTG---YLLCLTES-GAKGQ------GNGEKVQIGIVA 391
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGP-----A 304
V+ +TG+V+Y F DGF+RS +E LL ++P ELLL LS T K++ +
Sbjct: 392 VQPATGNVIYDNFEDGFMRSEIETRLLHIAPCELLLVGDLSAATNKLVKHLSKGRMTTFG 451
Query: 305 SNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
NVR+E + A + + S Y T PE + ++ +
Sbjct: 452 DNVRIEQMEKSKTAAAEAHSHISSFYAGKMAST---------GTPEDERASGLFDQVLKL 502
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
PD L+ I+HL ++GLE + L F+S S M L+ NTL LE+ +N ++ S
Sbjct: 503 PDDVTICLSAMIKHLTEYGLEHVFDLTKYFQSFSARSHMLLNGNTLTNLEIYQNQTDYSS 562
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L MN T T +G RLLRRWV PL D+ + R++AV+E+ E S T
Sbjct: 563 RGSLFWSMNRTRTKFGQRLLRRWVGRPLLDKAKLEERIEAVAELLEPDKSTLT------- 615
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+ L S+L+ + D+++ + R+++ T E + ++ K
Sbjct: 616 ---------------HNLGSILSQV--KIDLEKALIRVYYGKCTRPELLTML-------K 651
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+Q + + + + S +L I A P + L+ +N+ AA + D N
Sbjct: 652 SMQSIAMGFAHVKSPADTGFTSHILSESI--AILPTIYDGVVAYLNKINEAAARKDDKYN 709
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN- 663
S R + + + EL + + LG + +++SV+GI +L+E+ +
Sbjct: 710 FFRESEETEEIGEH-RLMIGTIEYELKDHLKSIAETLGKKKAQYVSVAGIDYLVEVENSQ 768
Query: 664 ---FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
KVP +W K++ TKK R+H+PEV+ + + E L C A+ L + Y
Sbjct: 769 STLKKVPASWRKISGTKKVSRFHTPEVVKMMRERDQQKESLAAACDKAFLDLLADISTKY 828
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
F+ +QALA +D LH+L+ ++ +V+P + D+ I+I GRHP+++ +L+D++
Sbjct: 829 QLFRDCIQALATIDALHSLSVIAAQPGYVKPKYTDE---TVINISQGRHPMVEKVLIDSY 885
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPNDT L + ++TGPNMGGKS Y+RQ+ALI IM Q+GS+VPA SA L +LD +YT
Sbjct: 886 VPNDTRLSTDETRALLVTGPNMGGKSSYVRQIALICIMGQIGSYVPAESATLGMLDSVYT 945
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY+
Sbjct: 946 RMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYM 1005
Query: 901 LEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
+ + + + LF+THY ++ + + F G + H+ + + QD+T+LY+V
Sbjct: 1006 VRNLRSLTLFITHYQNLSRLASTFPAGELRNVHMKFTET--------GDQGQDITFLYEV 1057
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA +P + A + + +LEA++S +
Sbjct: 1058 GEGVAHRSYGLNVARLANIPSGILEVARIKSGELEAKISRK 1098
>gi|67526583|ref|XP_661353.1| hypothetical protein AN3749.2 [Aspergillus nidulans FGSC A4]
gi|40740767|gb|EAA59957.1| hypothetical protein AN3749.2 [Aspergillus nidulans FGSC A4]
gi|259481704|tpe|CBF75474.1| TPA: DNA mismatch repair protein msh3 (MutS protein homolog 3)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B6T1] [Aspergillus
nidulans FGSC A4]
Length = 1091
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 337/940 (35%), Positives = 519/940 (55%), Gaps = 106/940 (11%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E+QV+E+K K+ D +L+IEVGYKFRFFGEDA +AAK L I AH
Sbjct: 196 TPMEKQVIEIKKKHMDTILLIEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEHPSEAH 255
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ +YT
Sbjct: 256 LD-RFASASIPVQRLHVHVKRLVAAGHKVGVVRQLETAALKAAGDNRNAPFVRKLTNVYT 314
Query: 196 KAT-LEAAEDVGGGEDGCGGES--NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
K+T ++ E + G G G S Y++C+ + + +G+ V +G+VAV+
Sbjct: 315 KSTYIDDIESLEGSTAGASGASATGYILCITETNARG-------WGNDEKVHVGIVAVQP 367
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV----- 307
+TGD+VY EF+DGF+RS +E LL ++P E+L+ LSK TEK++ +G NV
Sbjct: 368 TTGDIVYDEFDDGFMRSEIETRLLHIAPCEMLIVGELSKATEKLVQHLSGSKMNVFGDKV 427
Query: 308 RVECASRDCFIGGGALAEVMSLY-ENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
RVE A + + + V S Y E M ++ D + + ++ ++ +PD
Sbjct: 428 RVERAPKAKTAAAESHSHVSSFYAEKM----------KSADAADDEVASNLLQKVLGLPD 477
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
L+ I+H+ ++GLE ++ L F+ S M L+ NTL LE+ +N ++ S G
Sbjct: 478 QVTICLSAMIKHMTEYGLEHVLQLTKYFQHFSSRSHMLLNGNTLTSLEIYQNQTDYSSKG 537
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L ++ T T +G R+LR+WV PL DR + R++AV E+ + +R
Sbjct: 538 SLFWTLDRTQTRFGQRMLRKWVGRPLLDRRQLEDRVNAVEELKD----FR---------- 583
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGR-SPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
+V +VE + LG+ D+++G+ RI++ EF +
Sbjct: 584 ---NVVMVE--------RIKGLLGKIKHDLEKGLIRIYYGKMIAQEFADI---------- 622
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
E S + + I+ S P ++ L+ +N AA D
Sbjct: 623 -----------ESPADTGFSSPAISQAIM--SLPTILKDVVFFLNKINMHAARNDDKYEF 669
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL----P 661
+ + + + EL+ + + LG + + ++SV+GI +L+E+ P
Sbjct: 670 FREEEETEEISEH-KLGIGAVEHELEEHRPVAGEALGKKMVTYVSVAGIDYLVEVENNSP 728
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
A +VP +W K++ TKK R+H+PEV+ + Q E L C A+ + E Y
Sbjct: 729 AIKRVPASWMKISGTKKVSRFHTPEVVKMIRQRDQHREALAAACDKAFLALQAEIATNYQ 788
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
+ VQ+LA LDCL +LATL+ +V+P + E IH+ GRHP+++ +LLD++V
Sbjct: 789 ALRDCVQSLATLDCLVSLATLASQPGYVKPEYT---EETCIHVEQGRHPMVEQLLLDSYV 845
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND NL + + ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA +A+L +LD ++TR
Sbjct: 846 PNDINLDSSKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQAAKLGMLDAVFTR 905
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
MGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY++
Sbjct: 906 MGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMV 965
Query: 902 EHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
+ + LF+THY ++ + F G + H+ + S + +D+D+T+LY++
Sbjct: 966 RSIRSLTLFITHYQHLSAMVHSFPDGELRNVHMRFSES-------GTGADEDITFLYEIG 1018
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA LP + A +A+LE ++ R
Sbjct: 1019 EGVAHRSYGLNVARLANLPAPLLEMAKQKSAELEEKIRRR 1058
>gi|258564442|ref|XP_002582966.1| hypothetical protein UREG_07739 [Uncinocarpus reesii 1704]
gi|237908473|gb|EEP82874.1| hypothetical protein UREG_07739 [Uncinocarpus reesii 1704]
Length = 1123
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 336/943 (35%), Positives = 517/943 (54%), Gaps = 93/943 (9%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TPLE+QV+++K + D LL++EVGYKFRFFGEDA +AAK L I
Sbjct: 211 KLTPLEKQVIDIKNNHKDTLLVVEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEHPSE 270
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHL+ F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ L
Sbjct: 271 AHLNR-FASASIPVHRLHVHVKRLVRAGHKVGVVRQLETAALKAAGDNRNAPFERKLTNL 329
Query: 194 YTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
YTK T ++ E++ G G + + YL+C+ + + +G+ V++G+V
Sbjct: 330 YTKGTYIDDTEELEGLNAPGANNAAPATGYLLCMTESNAKG-------WGNNEKVQVGIV 382
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TG++++ F DGF+R+ +E LL ++P E LL ++K T+K++ +G NV
Sbjct: 383 AVQPATGNIIHDSFEDGFMRTEIETRLLHIAPCEFLLVGNVTKATDKLVQHLSGSKMNVF 442
Query: 308 ----RVECASRDCFIGGGALAEVMSLYE-NMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
RVE S+ G + V S Y M ++++E + + +E ++
Sbjct: 443 GDKVRVERVSKPKTAGAESHNHVSSFYAGRMKATGITHDERAS----------TLLEKVL 492
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
++P+ L+ I+HL ++ LE + L F+S S M L+ NTL LE+ N ++
Sbjct: 493 SLPEDVTICLSAMIKHLTEYKLENVFDLTKYFQSFSARSHMLLNGNTLTNLEIYHNQTDH 552
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
+ G+L ++ T T +G RLLR+WV PL D+ + R+ AV+E+
Sbjct: 553 TSKGSLFWSLDRTKTKFGQRLLRKWVGRPLLDKKELEDRVTAVTEL-------------- 598
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
K+SD T + +LS V T D+++ + RI++ T E + V+ +
Sbjct: 599 ----KDSDSTPRVGRLKTLLSKVKT------DLEKNLLRIYYGKCTRPELLTVLHTLQLI 648
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
+ HI TS T++ A+ A+ P V+ L+ +N AA D
Sbjct: 649 ATEFA--HIKSPADAGFTSSTINEAI-------ATLPVVLDDVNSYLNKINLHAAKTDDK 699
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA 662
+ E+ + + S + EL+ + LG + + + + +GI +LIE+
Sbjct: 700 FTFFQ-ELEETDEITEQKLGIGSVEHELEEYRTAAAEILGKKKVHYSTTAGIEYLIEVEN 758
Query: 663 NF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG 718
+ K+P +W K++ TKK R+H PEV++ + Q E L C A+ S L +
Sbjct: 759 SSYQLKKIPASWRKISGTKKVSRFHPPEVVSLMRQRDQHKEALAAACDKAFISLLADISS 818
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
Y F+ +QALA LDCL +LA ++ + RP + D+ +I + GRHP+++ +LLD
Sbjct: 819 KYQPFRDCIQALATLDCLMSLAAIAAQPGYSRPTYTDE---TRISVREGRHPMVEQLLLD 875
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
+VPND L +ITGPNMGGKS Y+RQVALI IM Q+GS+VPA SA L +LD +
Sbjct: 876 AYVPNDIELSTNETRALLITGPNMGGKSSYVRQVALIAIMGQIGSYVPAESATLGMLDAV 935
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
YTRMGA D++ G STF+ EL+E S IL+ T +SLVI+DELGRGTSTHDGVAIA A LD
Sbjct: 936 YTRMGAFDNMLAGESTFMVELSETSDILKQATPRSLVILDELGRGTSTHDGVAIAQAVLD 995
Query: 899 YLLEHKKCMVLFVTHYPKIADI-KTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLY 957
Y++ + + + LF+THY ++ + +T G + H+ + + QD+T+LY
Sbjct: 996 YMVRNIRSLTLFITHYQNLSSLARTYPNGELRNVHMKFTEA--------GNDGQDITFLY 1047
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+V GV+ S+G VA+LA +P S I A +A+LE + +
Sbjct: 1048 EVGEGVAHRSYGLNVARLANVPSSVIDVARTKSAELEERIKRK 1090
>gi|440639711|gb|ELR09630.1| hypothetical protein GMDG_04121 [Geomyces destructans 20631-21]
Length = 1129
Score = 560 bits (1444), Expect = e-156, Method: Compositional matrix adjust.
Identities = 328/946 (34%), Positives = 518/946 (54%), Gaps = 87/946 (9%)
Query: 77 PTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--- 133
P ++ K TP+E Q +++K K+ D +L++EVGYKF+FFGEDA +AAK LGI
Sbjct: 209 PAKGARKGAKSKLTPMEIQFLDIKRKHLDAILIVEVGYKFKFFGEDARVAAKELGIVCIP 268
Query: 134 -----------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGK 182
HLD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G +
Sbjct: 269 GKYRFDEHPSEGHLDR-FASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNR 327
Query: 183 AGPFGRGLSALYTKATL----EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFG 238
PF R L+ LYTK T E D G G + YL+C+ + ++ +G
Sbjct: 328 NTPFVRKLTNLYTKGTYIDDTEGLGDATAGTPGGAPATGYLLCITE-------AKSKGWG 380
Query: 239 DGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLL 298
V +G++AV+ TGDV+Y F DGF+RS +E LL +SP E L+ L+K TEK++
Sbjct: 381 TDEKVDVGILAVQPGTGDVIYDSFEDGFMRSEIETRLLHISPCEFLIVGELTKATEKLVQ 440
Query: 299 AYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 353
+ ++NV R+E ++ + + A V Y + ++ ++++ ++
Sbjct: 441 HLSSSSTNVFGDKIRIERVEKEKTVSAESYAHVAQFYARNIKAHGNSTDERSTNL----- 495
Query: 354 HRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQL 413
++ ++ +P+ L+ I+H+ ++GLE + L F+S M L+ NTL L
Sbjct: 496 ----LDKVLKLPESVTICLSSMIKHMSEYGLEHVFDLTKYFQSFGARSNMLLNGNTLTSL 551
Query: 414 EVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMG 473
E+ N ++ +E G+L ++ T T +G RLLR+WV PL D+ + R+ AV E+ +
Sbjct: 552 EIYHNQTDHAEKGSLFWTLDKTQTRFGKRLLRKWVGRPLIDKERLEERVAAVEELKDGNQ 611
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFI 533
+ + + L S+L + D++R + RI++ T E
Sbjct: 612 ATQVDK----------------------LKSLLMKI--KSDLERSLIRIYYGKCTRPELF 647
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN 593
V+Q +Q++ + + + S+LL + A+ P + L +N
Sbjct: 648 TVLQT-------MQRISNEFAHVKSPADAGFKSSLLNDAV--AALPTIGDAITDFLGKIN 698
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
EAA D + S + ++ + + S + +LD + ++ N+ +++ +G
Sbjct: 699 AEAARNDDKYAFFLESE-ETEDIGDHKLGIASVEHDLDEHRPIAAAKIKKTNIRYVTSAG 757
Query: 654 ITHLIELP-ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
I LIE+ N K VP +W KV+ TKK R+H+PE++ + + E L C A+ +
Sbjct: 758 IEFLIEVDNTNLKHVPASWVKVSGTKKLSRFHTPEIIKMIRERDQHKEALAAACDVAFSN 817
Query: 712 FLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPV 771
L + +Y F+ V +LA LDCL +LAT++ +V+P + D E I + GRHP+
Sbjct: 818 LLSDIAAHYQAFRDCVASLATLDCLLSLATVASQPGYVKPEYTGDTE---IAVVGGRHPM 874
Query: 772 LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
+ +LLD++VPNDT+L A+ +ITGPNMGGKS Y+R VALI IMAQ+GS+VPA SA
Sbjct: 875 AEQLLLDSYVPNDTSLSADGTRALLITGPNMGGKSSYVRHVALICIMAQIGSYVPAESAR 934
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
L +LD ++TRMGA D++ G STF+ EL+E + IL+ T SLVI+DELGRGTSTHDGVA
Sbjct: 935 LGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPWSLVILDELGRGTSTHDGVA 994
Query: 892 IAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSD 950
IA A LDY++ KC+ LF+THY +A + F +G + H+ + T H +G D
Sbjct: 995 IAQAVLDYVVRDLKCLTLFITHYQTLAGVARAFGSGELRNVHMKF-TEHGRVG------D 1047
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+D+T+L+++ GV+ S+G VA+LA++P + A ++++E E
Sbjct: 1048 EDITFLFQIGEGVAHRSYGLNVARLARIPKGVLEVAKEKSSRMEEE 1093
>gi|119177119|ref|XP_001240377.1| hypothetical protein CIMG_07540 [Coccidioides immitis RS]
Length = 1181
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 332/958 (34%), Positives = 526/958 (54%), Gaps = 96/958 (10%)
Query: 77 PTPSSQTTHNKK-----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLG 131
P PS++ +K TPLE+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L
Sbjct: 253 PPPSTKARGARKAASTKLTPLEKQVIDIKNKHKDAILVVEVGYKFRFFGEDARIAAKELS 312
Query: 132 IY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA 177
I AHL+ F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA
Sbjct: 313 IVCIPGKLRFDEHPSEAHLNR-FASASIPVHRLHVHVKRLVRAGHKVGVVRQLETAALKA 371
Query: 178 HGPGKAGPFGRGLSALYTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKI 232
G + PF R L+ LYTK T ++ E++ G G + + YL+C+ + +
Sbjct: 372 AGDNRNAPFERKLTHLYTKGTYIDDTEELEGLNAVGANSAAPATGYLLCMTESNAKG--- 428
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQ 292
+G+ V++G++AV+ +TG++++ F DGF+R+ +E LL ++P E LL +S+
Sbjct: 429 ----WGNDEKVQVGILAVQPATGNIIHDSFEDGFMRTEIETRLLHIAPCEFLLIGDVSRA 484
Query: 293 TEKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD 347
T+K++ +G NV RVE S+ + + V S Y + T + +++ D
Sbjct: 485 TDKLVQHLSGSKMNVFGDKVRVERVSKSKTAAAESHSHVSSFYAGRMKATSTTQDERARD 544
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSA 407
+ ++ ++N+P+ L+ I+HLK++ LE + L F+ S M L+
Sbjct: 545 L---------LDKVLNLPEDVTICLSAMIKHLKEYNLENVFDLTKYFQPFSARSHMLLNG 595
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
NTL LE+ +N + + G+L ++ T T +G RLLR+WV PL D+ + R+ AV+E
Sbjct: 596 NTLINLEIYQNQTEQTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKQELEDRVAAVTE 655
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
+ K+SD T + +LS V T D+++ + RI++
Sbjct: 656 L------------------KDSDATPRVGRLKTLLSKVKT------DLEKNLLRIYYGKC 691
Query: 528 TPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK 587
T E + V+Q + + H+ S ++ A+ + P V+
Sbjct: 692 TRPELLTVLQTLQLIATEFS--HVKSPADAGFDSPVINEAI-------SQLPVVLDDVVS 742
Query: 588 LLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
L+ +N +A D + S + E+ + + S + +L+ N + L + +
Sbjct: 743 YLNKINLHSAKADDKFSFFQESE-ETDEITEQKLGIGSVEHDLEEYRNTAAEILCKKKVC 801
Query: 648 FMSVSGITHLIELPANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+++ +GI +LIE+ + K+P +W K++ TKK R+H PEV+ + + E L
Sbjct: 802 YVTNAGIEYLIEVENSSLQMKKIPASWRKISGTKKVSRFHPPEVVNLMRERDQHKEALAA 861
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIH 763
C A+ L + Y F+ +QALA LDC +LA ++ +VRP + D+ +I
Sbjct: 862 ACDKAFLGLLADISTKYQPFRDCIQALATLDCFMSLAAVAAQPGYVRPTYADE---ARIS 918
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
+ GRHP+++ +LLD +VPNDT L + ++TGPNMGGKS Y+RQVALI IM Q+GS
Sbjct: 919 VRGGRHPMVEQLLLDTYVPNDTELGTDGTRALLVTGPNMGGKSSYVRQVALISIMGQIGS 978
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
+VPA SA L +LD +YTRMGA D++ G STF+ EL+E S IL+ T +SLVI+DELGRG
Sbjct: 979 YVPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETSDILKQATPRSLVILDELGRG 1038
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVM 942
TSTHDGVAIA A LDY++ + + LF+THY ++++ F G + H+ + S
Sbjct: 1039 TSTHDGVAIAQAVLDYMVRDIRSLTLFITHYQHLSNLARTFPNGELRNVHMKFTES---- 1094
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
K QD+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1095 ----GKDGQDITFLYEVGEGVAHRSYGLNVARLANIPSSVLDVAYTKSAELEEKIKRK 1148
>gi|442570230|sp|Q1DQ73.2|MSH3_COCIM RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|392867658|gb|EAS29089.2| DNA mismatch repair protein MSH3 [Coccidioides immitis RS]
Length = 1125
Score = 557 bits (1436), Expect = e-155, Method: Compositional matrix adjust.
Identities = 332/958 (34%), Positives = 526/958 (54%), Gaps = 96/958 (10%)
Query: 77 PTPSSQTTHNKK-----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLG 131
P PS++ +K TPLE+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L
Sbjct: 197 PPPSTKARGARKAASTKLTPLEKQVIDIKNKHKDAILVVEVGYKFRFFGEDARIAAKELS 256
Query: 132 IY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA 177
I AHL+ F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA
Sbjct: 257 IVCIPGKLRFDEHPSEAHLNR-FASASIPVHRLHVHVKRLVRAGHKVGVVRQLETAALKA 315
Query: 178 HGPGKAGPFGRGLSALYTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKI 232
G + PF R L+ LYTK T ++ E++ G G + + YL+C+ + +
Sbjct: 316 AGDNRNAPFERKLTHLYTKGTYIDDTEELEGLNAVGANSAAPATGYLLCMTESNAKG--- 372
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQ 292
+G+ V++G++AV+ +TG++++ F DGF+R+ +E LL ++P E LL +S+
Sbjct: 373 ----WGNDEKVQVGILAVQPATGNIIHDSFEDGFMRTEIETRLLHIAPCEFLLIGDVSRA 428
Query: 293 TEKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD 347
T+K++ +G NV RVE S+ + + V S Y + T + +++ D
Sbjct: 429 TDKLVQHLSGSKMNVFGDKVRVERVSKSKTAAAESHSHVSSFYAGRMKATSTTQDERARD 488
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSA 407
+ ++ ++N+P+ L+ I+HLK++ LE + L F+ S M L+
Sbjct: 489 L---------LDKVLNLPEDVTICLSAMIKHLKEYNLENVFDLTKYFQPFSARSHMLLNG 539
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
NTL LE+ +N + + G+L ++ T T +G RLLR+WV PL D+ + R+ AV+E
Sbjct: 540 NTLINLEIYQNQTEQTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKQELEDRVAAVTE 599
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
+ K+SD T + +LS V T D+++ + RI++
Sbjct: 600 L------------------KDSDATPRVGRLKTLLSKVKT------DLEKNLLRIYYGKC 635
Query: 528 TPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK 587
T E + V+Q + + H+ S ++ A+ + P V+
Sbjct: 636 TRPELLTVLQTLQLIATEFS--HVKSPADAGFDSPVINEAI-------SQLPVVLDDVVS 686
Query: 588 LLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
L+ +N +A D + S + E+ + + S + +L+ N + L + +
Sbjct: 687 YLNKINLHSAKADDKFSFFQESE-ETDEITEQKLGIGSVEHDLEEYRNTAAEILCKKKVC 745
Query: 648 FMSVSGITHLIELPANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+++ +GI +LIE+ + K+P +W K++ TKK R+H PEV+ + + E L
Sbjct: 746 YVTNAGIEYLIEVENSSLQMKKIPASWRKISGTKKVSRFHPPEVVNLMRERDQHKEALAA 805
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIH 763
C A+ L + Y F+ +QALA LDC +LA ++ +VRP + D+ +I
Sbjct: 806 ACDKAFLGLLADISTKYQPFRDCIQALATLDCFMSLAAVAAQPGYVRPTYADE---ARIS 862
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
+ GRHP+++ +LLD +VPNDT L + ++TGPNMGGKS Y+RQVALI IM Q+GS
Sbjct: 863 VRGGRHPMVEQLLLDTYVPNDTELGTDGTRALLVTGPNMGGKSSYVRQVALISIMGQIGS 922
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
+VPA SA L +LD +YTRMGA D++ G STF+ EL+E S IL+ T +SLVI+DELGRG
Sbjct: 923 YVPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETSDILKQATPRSLVILDELGRG 982
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVM 942
TSTHDGVAIA A LDY++ + + LF+THY ++++ F G + H+ + S
Sbjct: 983 TSTHDGVAIAQAVLDYMVRDIRSLTLFITHYQHLSNLARTFPNGELRNVHMKFTES---- 1038
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
K QD+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1039 ----GKDGQDITFLYEVGEGVAHRSYGLNVARLANIPSSVLDVAYTKSAELEEKIKRK 1092
>gi|121711343|ref|XP_001273287.1| DNA mismatch repair protein Msh3, putative [Aspergillus clavatus NRRL
1]
gi|190359844|sp|A1CDD4.1|MSH3_ASPCL RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|119401438|gb|EAW11861.1| DNA mismatch repair protein Msh3, putative [Aspergillus clavatus NRRL
1]
Length = 1130
Score = 557 bits (1435), Expect = e-155, Method: Compositional matrix adjust.
Identities = 345/962 (35%), Positives = 532/962 (55%), Gaps = 110/962 (11%)
Query: 77 PTPSSQTTHNKK-----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLG 131
P P+++ +KK TPLE+QV+E+K K+ D +L+IEVGYK+RFFGEDA +AAK L
Sbjct: 201 PAPAAKGRGSKKAGGGKLTPLEKQVIEIKRKHMDTVLVIEVGYKYRFFGEDARIAAKELS 260
Query: 132 IY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA 177
I AHLD F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA
Sbjct: 261 IVCIPGKMRFDEHPSEAHLD-RFASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAALKA 319
Query: 178 HGPGKAGPFGRGLSALYTKATLEAAEDVGGGED----GCGGES---NYLVCVVDDDGNVG 230
G + PF R L+ LYTK T +DV G E GG S YL+C+ + +
Sbjct: 320 AGDNRNAPFSRKLTNLYTKGTY--VDDVEGLEGPTPAASGGASPATGYLLCITETNAKG- 376
Query: 231 KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLS 290
+G+ V +G+VAV+ +TGD++Y +F DGF+RS +E LL ++P EL++ LS
Sbjct: 377 ------WGNDERVHVGIVAVQPNTGDIIYDDFEDGFMRSEVETRLLHIAPCELVIVGELS 430
Query: 291 KQTEKMLLAYAGPASN-----VRVECASRDCFIGGGALAEVMSLY-ENMGEDTLSNNEDQ 344
K TEK++ +G N VRVE + + + V + Y + ++ + +
Sbjct: 431 KATEKLVQHLSGSKLNTFGDKVRVERVGKKKTAVAESHSHVANFYASKLKAASVDDTQTS 490
Query: 345 NMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT 404
N+ ++ ++ +P+ L+ I H+ ++GLE I L F+ S M
Sbjct: 491 NL-----------LQKVLTLPEQVTVCLSAMIEHMTEYGLEHIFQLTKYFQHFSSRSHML 539
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L+ANTL LE+ +N ++ S G+L ++ T T +G RLLR+WV PL D++ + R++A
Sbjct: 540 LNANTLVSLEIYQNQTDHSTKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKSRLEERVNA 599
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
V E+ KN + T+ + +L + + D+++ + RI++
Sbjct: 600 VEEL------------------KNPEKTVQVERLKRLLGRIKS------DLEKNLIRIYY 635
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
T E + V+Q + + + Q + D + E S +L + AS P ++
Sbjct: 636 GKCTRPELLTVLQTL----QTIAQEYADVKSPE---DNGFASPVLGEAV--ASLPTILKD 686
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
L+ +N AA D S + E++ + + S + EL+ + L
Sbjct: 687 VVAFLNKINMHAARSDDKYEFFRESE-ETDEISEHKLGIASVEHELEEHRAVAAGILKWP 745
Query: 645 NLEFMSVSGITHLIELP----ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
+ +++ SGI +LIE+ A +VP +W KV+ TKK R+H+PEV+ L Q E
Sbjct: 746 KVVYVTSSGIEYLIEVENTSNAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEA 805
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV 760
L C A+ + L E Y F+ VQALA LDCL +LA ++ +V+P + D
Sbjct: 806 LAAACDKAFAALLAEIAVNYQLFRDCVQALATLDCLLSLAAIASQPGYVKPEYTD----- 860
Query: 761 QIHIC----SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIG 816
H C GRHP+++ +LLD++VPNDT+L ++ ++TGPNMGGKS Y+RQVALI
Sbjct: 861 --HTCICVEQGRHPMVEQLLLDSYVPNDTDLDTDQTRALLVTGPNMGGKSSYVRQVALIA 918
Query: 817 IMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVI 876
IM Q+GS+VPA SA+L +LD ++TRMGA D++ G STF+ EL+E + IL+ T +SLVI
Sbjct: 919 IMGQIGSYVPARSAKLGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVI 978
Query: 877 VDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSY 935
+DELGRGTSTHDGVAIA A LDY++ + + LF+THY ++++ F + H+ +
Sbjct: 979 LDELGRGTSTHDGVAIAQAVLDYMVRTIRSLTLFITHYQHLSNMTQSFPDHELRNVHMRF 1038
Query: 936 LTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
S + D+++T+LY+V GV+ S+G VA+LA LP + A + +A+LE
Sbjct: 1039 TES-------GAGQDEEITFLYEVGEGVAHRSYGLNVARLANLPAPLLDVAKLKSAELEE 1091
Query: 996 EV 997
++
Sbjct: 1092 QI 1093
>gi|303316169|ref|XP_003068089.1| DNA mismatch repair family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107765|gb|EER25944.1| DNA mismatch repair family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 1125
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 333/958 (34%), Positives = 527/958 (55%), Gaps = 96/958 (10%)
Query: 77 PTPSSQTTHNKK-----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLG 131
P PS++ +K TPLE+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L
Sbjct: 197 PPPSTKARGARKAASTKLTPLEKQVIDIKNKHKDAILVVEVGYKFRFFGEDARIAAKELS 256
Query: 132 IY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA 177
I AHL+ F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA
Sbjct: 257 IVCIPGKLRFDEHPSEAHLNR-FASASIPVHRLHVHVKRLVRAGHKVGVVRQLETAALKA 315
Query: 178 HGPGKAGPFGRGLSALYTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKI 232
G + PF R L+ LYTK T ++ E++ G G + + YL+C+ + +
Sbjct: 316 AGDNRNAPFERKLTHLYTKGTYIDDTEELEGLNAVGANSAAPATGYLLCMTESNAKG--- 372
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQ 292
+G+ V++G++AV+ +TG++++ F DGF+R+ +E LL ++P E LL +S+
Sbjct: 373 ----WGNDEKVQVGILAVQPATGNIIHDSFEDGFMRTEIETRLLHIAPCEFLLIGDVSRA 428
Query: 293 TEKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD 347
T+K++ +G NV RVE S+ + + V S Y + T + +++ D
Sbjct: 429 TDKLVQHLSGSKMNVFGDKVRVERVSKSKTAAAESHSHVSSFYAGRMKATSTIQDERARD 488
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSA 407
+ ++ ++N+P+ L+ I+HLK++ LE + L F+ S M L+
Sbjct: 489 L---------LDKVLNLPEDVTICLSAMIKHLKEYNLENVFDLTKYFQPFSARSHMLLNG 539
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
NTL LE+ +N + + G+L ++ T T +G RLLR+WV PL D+ + R+ AV+E
Sbjct: 540 NTLINLEIYQNQTEQTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKQELENRVAAVTE 599
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
+ K+SD T + +LS V T D+++ + RI++
Sbjct: 600 L------------------KDSDATPRVGRLKTLLSKVKT------DLEKNLLRIYYGKC 635
Query: 528 TPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK 587
T E + V+Q + + H+ S ++ A+ + PAV+
Sbjct: 636 TRPELLTVLQTLQLIATEFS--HVKSPADAGFDSPVINEAITQL-------PAVLDDVVS 686
Query: 588 LLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
L+ +N +A D + S + E+ + + S + +L+ N + L + +
Sbjct: 687 YLNKINLHSAKADDKFSFFQESE-ETDEITEQKLGIGSVEHDLEEYRNTAAEILCKKKVC 745
Query: 648 FMSVSGITHLIELPANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+++ +GI +LIE+ + K+P +W K++ TKK R+H PEV+ + + E L
Sbjct: 746 YVTNAGIEYLIEVENSSLQMKKIPASWRKISGTKKVSRFHPPEVVNLMRERDQHKEALAA 805
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIH 763
C A+ L + Y F+ +QALA LDC +LA ++ +VRP + D+ +I
Sbjct: 806 ACDKAFLGLLADISTKYQPFRDCIQALATLDCFMSLAAVAAQPGYVRPTYADE---ARIS 862
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
+ GRHP+++ +LLD +VPNDT L + ++TGPNMGGKS Y+RQVALI IM Q+GS
Sbjct: 863 VRGGRHPMVEQLLLDTYVPNDTELGIDGTRALLVTGPNMGGKSSYVRQVALISIMGQIGS 922
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
+VPA SA L +LD +YTRMGA D++ G STF+ EL+E S IL+ T +SLVI+DELGRG
Sbjct: 923 YVPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETSDILKQATPRSLVILDELGRG 982
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVM 942
TSTHDGVAIA A LDY++ + + LF+THY ++++ F G + H+ + S
Sbjct: 983 TSTHDGVAIAQAVLDYMVRDIRSLTLFITHYQHLSNLARTFPNGELRNVHMKFTES---- 1038
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
K QD+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1039 ----GKDGQDITFLYEVGEGVAHRSYGLNVARLANIPSSVLDVAYTKSAELEEKIKRK 1092
>gi|449295288|gb|EMC91310.1| hypothetical protein BAUCODRAFT_39478 [Baudoinia compniacensis UAMH
10762]
Length = 1164
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 341/941 (36%), Positives = 525/941 (55%), Gaps = 83/941 (8%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+QV+E+K K+PD LL++EVGYKFRFFGEDA +AAK L I
Sbjct: 248 KLTPMEKQVLEIKHKHPDTLLVVEVGYKFRFFGEDARIAAKELSIVCIPGKYRFDEHPSE 307
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AH+D F +AS+P RL+VHV+RLV+AG KVGVV+Q ETAA+KA G + F RGL+ L
Sbjct: 308 AHID-RFASASVPVHRLSVHVKRLVSAGHKVGVVRQLETAALKAAGTNRNTTFERGLTNL 366
Query: 194 YTKATL----EAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGV 247
YTK T EA + G + G + +L+C+ + R +G V++G+
Sbjct: 367 YTKGTYIDDQEALDGTSPGPEDQGVAPATGHLLCLTE-------TRPKGWGSDEKVQIGL 419
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
VAV+ STGD++Y +F DG++RS LE LL +SP E L+ LS+ T+K++ +G +NV
Sbjct: 420 VAVQPSTGDIIYDDFEDGWMRSELETRLLHISPCEFLIVGGLSRATDKLVQHLSGSKTNV 479
Query: 308 -----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
RVE + + A + + Y D L + + V + ++ +
Sbjct: 480 FGDKARVERVEKPKTMAAEAYSHISRFYA----DKLRADAPSSSQVESSQETGTLLDKVH 535
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
+ + A L+ I HL +GL+ + L F+S S M L+ NTL LE+ RN ++
Sbjct: 536 KLSENATICLSAMITHLTDYGLQHVFDLTKYFQSFSARSHMLLNGNTLTSLEIYRNQTDY 595
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
SE G+L ++ T T +G RLLR+WV PL DR + R A+ E+
Sbjct: 596 SERGSLFWTLDRTRTRFGRRLLRKWVGRPLLDRLRLDERTAAIEEL-------------- 641
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
KN+ T + ++L+ D++R + RI+++ T E + V+Q +
Sbjct: 642 ----KNNQQTTQVDRIEHLLNKT------RADLERSLIRIYYKKCTRPELLGVLQTLQMI 691
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
++ H+ SK + A+ AS P + + L +N EAA + D
Sbjct: 692 AQEYA--HVTSASNAGFESKLISEAI-------ASLPRIADDVLQYLERLNAEAAKKDDK 742
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA 662
L + + ++ + + + + +L+ + +++ + +E+++V+GI +LIEL
Sbjct: 743 YGLFRDEH-ETEDITHHKVGIAAVEHDLEEFKEVAAEKVKRKKVEYVTVAGIDYLIELEN 801
Query: 663 N--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+ +P +WAK++ TKK RYH+PEV+ + + E L C AA+ + L E GG Y
Sbjct: 802 SQLKNLPASWAKISGTKKVSRYHAPEVVRLIRERDQHKEALANACDAAFVALLTEIGGKY 861
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
F+ VQ+LA LDCL LA ++ + +P F D + I I +GRHP+++ +LLD F
Sbjct: 862 QAFRDCVQSLALLDCLLCLAEVAAQPGYCKPEFTDK---IGIDIEAGRHPMVEQLLLDAF 918
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPND +L +E ++TGPNMGGKS Y+R VALI IMAQ+GS+VPA S +L +LD ++T
Sbjct: 919 VPNDVHLASEAPRALLVTGPNMGGKSSYVRSVALIAIMAQIGSYVPADSVKLGLLDAVFT 978
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA D++ +G STF+ EL+E S IL+ + +SLVI+DELGRGTSTHDGVAIA A L+Y+
Sbjct: 979 RMGAFDNMMKGESTFMVELSETSDILKQASPRSLVILDELGRGTSTHDGVAIAEAVLNYI 1038
Query: 901 LEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
+ K + LF+THY +A + +F G + H+ + G + +VT+LY+V
Sbjct: 1039 ISKLKSLTLFITHYQSLARMAEQFPEGELKNVHMRFTEQQTGSG------ETEVTFLYEV 1092
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA LP S + A + ++++E + R
Sbjct: 1093 GDGVAHRSYGLNVARLAGLPGSLLDEARMRSSQMEEKERRR 1133
>gi|406864269|gb|EKD17315.1| putative DNA mismatch repair protein msh3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1137
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 336/945 (35%), Positives = 519/945 (54%), Gaps = 87/945 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TPLE Q +E+K K D +L++EVGYKF+FFGEDA AAKVL I AH
Sbjct: 214 TPLELQFLEIKRKQMDTVLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRYDEHPSEAH 273
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL+VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ +YT
Sbjct: 274 LD-RFASASIPVHRLSVHAKRLVGAGLKVGVVRQIETAALKKAGDNRNAPFTRKLTNVYT 332
Query: 196 KATLEAAEDVGGGE---DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
K T +D+ G + +G + YL+C+ + +G V +G++AV+
Sbjct: 333 KGTY--VDDIDGLDQETEGAAPATGYLLCITESKAKG-------WGTDEKVDVGILAVQP 383
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN-----V 307
+TGD++Y F DGF+RS LE LL ++P E LL L+K T+K++ +G ++N +
Sbjct: 384 ATGDIIYDTFEDGFMRSELETRLLHIAPCEFLLVGELTKATDKLIKHLSGSSTNQSGDTI 443
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL 367
RVE + G +AE S D L E+++ E+ +S ++ ++ +P+
Sbjct: 444 RVERVKQ----GKTMVAESHSHVTQFYADKLKAQENES----EKDREQSLLDKVLKLPEQ 495
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
L+ I H+ ++GLE + L F+S S M L+ NTL LEV +N ++ SE G+
Sbjct: 496 VTLCLSAMIIHMTEYGLEHVFDLTKYFQSFSTRSHMLLNGNTLTSLEVYQNQTDYSEKGS 555
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
L ++ T T +G RLLR+WV HPL D+ + R+ AV E+ + + + +
Sbjct: 556 LFWTLDKTKTRFGRRLLRKWVGHPLLDQTQLEDRVSAVEELKDGHQTPKVDK-------- 607
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
L ++L ++ D++R + RI++ T E + +Q LQ
Sbjct: 608 --------------LQALLRNI--KIDLERSLIRIYYGKCTRPELLTALQT-------LQ 644
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
++ + Y SAL+ I AS PA+ L ++ EAA + D
Sbjct: 645 RISNEYSYVRGPADAPFKSALINNAI--ASLPAIGETVIAFLDMISAEAARKDDKYAFF- 701
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPAN--F 664
+ + ++ + + + ++ELD+ + L R + + +V+GI +LIE+P
Sbjct: 702 HEDHETEDITDHKLGIAAVEQELDAHREVATDTLHQRKKIIYSTVAGIEYLIEVPNQDLK 761
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
+VP +W KV+ TKK R+H+P+V+ L + E L+ C A+ + L +Y +
Sbjct: 762 RVPASWTKVSGTKKASRFHTPDVIRMLRERDQHKESLSAACETAFHTLLSSISAHYGPLR 821
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
A+ L+ LDCL +LAT++ + +P FV + +I I GRHP+++ +L ++PN
Sbjct: 822 DAISGLSTLDCLLSLATVAAFPGYTKPTFVSSPD-TRISIQGGRHPMVEQLLPSTYIPNS 880
Query: 785 TNLH-----AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
T L + +ITGPNMGGKS Y+RQVALI ++AQ+GSFVPA SA L +LDGIY
Sbjct: 881 TTLSNAPSPSTDPRAILITGPNMGGKSSYVRQVALICLLAQLGSFVPADSATLSLLDGIY 940
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TRMGA DS+ +STF EL+E S IL++ T +SLVI+DELGRGTSTHDGVAIA A LD+
Sbjct: 941 TRMGAYDSLFTNQSTFQVELSETSSILKSATPKSLVILDELGRGTSTHDGVAIAGAVLDH 1000
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK----VMGPMDSKSDQDVTY 955
++ +C+ LF+THY +A + F G + H+ + + K +G ++++T+
Sbjct: 1001 VVRETRCLCLFITHYQSLASVARSFDGELRNVHMKFSAAKKGSGVEIGEGGGDGEEEITF 1060
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
LY+V GV+ S+G VA+LA +P + + A + +LE EV +
Sbjct: 1061 LYEVGAGVAHRSYGLNVARLANVPKAVLDMAATKSHELEMEVKQK 1105
>gi|451848741|gb|EMD62046.1| hypothetical protein COCSADRAFT_147401 [Cochliobolus sativus ND90Pr]
Length = 1144
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 333/945 (35%), Positives = 522/945 (55%), Gaps = 101/945 (10%)
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------- 133
T K TP+E Q +++K K+ D ++++EVGYK++FFGEDA +A+K LGI
Sbjct: 231 TKKASKLTPMEIQYLDIKRKHLDTIIVMEVGYKYKFFGEDARIASKELGIVCIPGKFRYD 290
Query: 134 -----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
AHLD F +AS PT RL VHV+RLV A KVGVV+Q ETAA+KA G + PF R
Sbjct: 291 EHPSEAHLD-KFASASFPTHRLQVHVKRLVQANHKVGVVRQVETAALKAAGNNRNAPFVR 349
Query: 189 GLSALYTKATLEAAEDVGGGE---DGCGGESN---YLVCVVDDDGNVGKIRNGVFGDGFD 242
L+ LYTK T +DV G E +G G + YL+C+ + + +G
Sbjct: 350 KLTNLYTKGTY--VDDVEGLETPTEGSGASAQSTGYLLCITESNAKG-------WGTDEK 400
Query: 243 VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG 302
V++G+VAV+ +TGD++Y +F DGF+RS +E LL ++PAE L+ LSK T K++ +
Sbjct: 401 VQVGLVAVQPATGDIIYDDFEDGFMRSEIETRLLHIAPAEFLVVGDLSKATNKLIEHLSA 460
Query: 303 PASNV-----RVECASRDCFIGGGALAEVMSLYE-NMGEDTLSNNEDQNMDVPEQGNHRS 356
+NV RVE + + A + + + Y M T +++E Q +
Sbjct: 461 SKTNVFGDRSRVERVEKPKTMAAQAHSHISNFYAGKMKSSTDADSEKQG----------A 510
Query: 357 AIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVL 416
++ + + + L+ I +L ++GLE + L F+ S M L+ NTL LE+
Sbjct: 511 VLDKVHQLSEHVTICLSAMITYLSEYGLEHVFDLTKYFQPFSARSYMLLNGNTLSSLEIY 570
Query: 417 RNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYR 476
+N ++ + G+L MN T T +G RLLR+WV PL D+ + R+ AV E+ E
Sbjct: 571 QNQTDYTSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKVKLEERIAAVEELKE------ 624
Query: 477 TSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVM 536
G+H TI + ++L + T D+++ + RI+++ T E ++ +
Sbjct: 625 -----GEH-------TIPVDKLKFVLGEIKT------DLEKVLIRIYYKKCTRPELLSAL 666
Query: 537 QAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASS--PAVIGKAAKLLSTVNK 594
QA LQ+ I +Y T + S L L+ A S P + L +N
Sbjct: 667 QA-------LQE--ISSQYLSAQTPE--QSGFLSTLLSEAVSNVPKIYEDLNGFLDKINA 715
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
AA D + + ++ + ++ S +++L + +LG +++++V+GI
Sbjct: 716 SAAKDDDKYSFFR-EEHEAEDINDLKLSIASVEDDLSTHRKEAAAKLGKSKVDYVTVAGI 774
Query: 655 THLIEL----PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+LIE+ P KVP +W ++++TK T+R+H+PEV L + E L C A+
Sbjct: 775 EYLIEVKRKSPEEKKVPASWQQISATKATLRFHTPEVKRMLQERDQYKESLAAACDRAYM 834
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
L+E Y + + + +LA LD L +LATL+ +V+P F DD +QI+I GRHP
Sbjct: 835 RLLEEISSKYQQLRDCIASLATLDALLSLATLANQPGYVKPTFTDD---IQINITGGRHP 891
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++ +LLD++VPND +L + ++TGPNMGGKS ++R ALI IM Q+GS+VPA+ A
Sbjct: 892 MVEQLLLDSYVPNDLSLSHDSTRALLVTGPNMGGKSSFVRSAALIAIMGQIGSYVPANEA 951
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +LD ++TRMGA D++ +G STF+ ELNE S IL++ T +SLVI+DELGRGTST DGV
Sbjct: 952 RLGMLDAVFTRMGAFDNMLKGESTFMVELNETSDILKSATPRSLVILDELGRGTSTFDGV 1011
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKS 949
AIA A LDY++ + + LF+THY +A + ++F G + H+ + +
Sbjct: 1012 AIAEAVLDYVIRDLQSLTLFITHYQHLARVPSRFPDGQLKNVHMRF---------EEQNG 1062
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++V +LY+ G+S S+G VA+LA++P I A V +A+LE
Sbjct: 1063 GREVVFLYEATEGISHRSYGLNVARLARVPDKVIDVAEVKSAELE 1107
>gi|302661996|ref|XP_003022658.1| hypothetical protein TRV_03218 [Trichophyton verrucosum HKI 0517]
gi|291186616|gb|EFE42040.1| hypothetical protein TRV_03218 [Trichophyton verrucosum HKI 0517]
Length = 1117
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 356/1050 (33%), Positives = 559/1050 (53%), Gaps = 121/1050 (11%)
Query: 11 RFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRK--------VVSSLFPPKT 62
R +P N SS++ + R Q+ P + SPA+RK V L P
Sbjct: 126 RPSSPIQNTEPQSSASRAERFRFQSSPVQPTTDEQISPAERKKKDQLHQKFVRRLGGPDC 185
Query: 63 PKKPKLSPHT----LNPI---------------PTP---SSQTTHNKKYTPLEQQVVELK 100
P L+PH ++P+ P P +++ K TP+E+Q++E+K
Sbjct: 186 --LPALNPHDGASEVDPVVEGAASDEEEEDSPPPAPKGRAAKKAGGSKLTPMERQIMEIK 243
Query: 101 TKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNA 160
K+ D +L+I+VGYK++F+ AHL F +AS+P RL+VHV+RLV A
Sbjct: 244 NKHLDAVLLIQVGYKYQFYDPSE----------AHLTR-FASASVPIHRLHVHVKRLVAA 292
Query: 161 GFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL---EAAEDVGGGEDGCGGESN 217
G+KVGVVKQ ETAA+KA G + PF R L+ +YTKAT +A ++ G + G
Sbjct: 293 GYKVGVVKQLETAALKAAGDNRNAPFVRKLTNMYTKATYIEDDAELELSGALEPSTG--- 349
Query: 218 YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLS 277
YL+C+ + G G+ GDG V++G+VAV+ +TG+V+Y F DGF+RS +E LL
Sbjct: 350 YLLCLTES-GAKGQ------GDGEKVQIGIVAVQPATGNVIYDSFEDGFMRSEIETRLLH 402
Query: 278 LSPAELLLGQPLSKQTEKMLLAYAGP-----ASNVRVECASRDCFIGGGALAEVMSLYEN 332
++P ELLL LS T K++ + +VR+E + A + + S Y
Sbjct: 403 IAPCELLLIGDLSAATNKLVQHLSKGRMTTFGDSVRIERREQSKTAAAEAHSHISSFYAG 462
Query: 333 MGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGA 392
T S PE N + ++ ++ +PD L+ I+HL ++GLE + L
Sbjct: 463 KMAATGS---------PEDANASNLLDQVLKLPDDVTICLSAMIKHLTEYGLEHVFDLTK 513
Query: 393 SFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPL 452
F+S S M L+ NTL LE+ +N ++ S G+L MN T T +G RLLRRWV PL
Sbjct: 514 YFQSFSARSHMLLNGNTLTNLEIYQNQTDYSSKGSLFWSMNRTRTKFGQRLLRRWVGRPL 573
Query: 453 CDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRS 512
D+ + R +AV+E+ +S S T Y L + L+ +
Sbjct: 574 LDKVKLEERTEAVTELLDSDKSTLT----------------------YNLGATLSQV--R 609
Query: 513 PDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRL 572
D+++ + R+++ + E + ++ K +Q + + + + S +L
Sbjct: 610 VDLEKALIRVYYGKCSRPELLTML-------KSMQSIAVSFAHVKSPADSGFKSPILSES 662
Query: 573 ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDS 632
I A P + L+ +N+ AA + D + S + E+ R + + + EL
Sbjct: 663 I--AILPTMHDDVVSYLNKINETAAKKDDKYDFFRESE-ESEEIGEHRLMIGTIEYELKD 719
Query: 633 LINMCRKQLGMRNLEFMSVSGITHLIELP----ANFKVPLNWAKVNSTKKTIRYHSPEVL 688
+ + LG + ++++SV+GI +L+E+ A KVP +W K++ TKK R+H+PEV+
Sbjct: 720 HLKSIAETLGKKKVQYVSVAGIDYLVEVENSQGALKKVPASWRKISGTKKVSRFHTPEVV 779
Query: 689 TALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF 748
+ + E L C AA+ L + Y F+ +QALA +D LH+L+ ++ +
Sbjct: 780 KMMRERDQQKESLAAACDAAFLKLLSDISTKYQLFRDCIQALATIDALHSLSVIAAQPGY 839
Query: 749 VRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCY 808
V+P + DD I+I GRHP+++ +L+D++VPNDT L + ++TGPNMGGKS Y
Sbjct: 840 VKPTYTDD---TIINISQGRHPMVEKVLIDSYVPNDTQLSTDETRALLVTGPNMGGKSSY 896
Query: 809 IRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRN 868
+RQ+ALI IM Q+GS+VPA SA L +LD +YTRMGA D++ G STF+ EL+E + IL+
Sbjct: 897 VRQIALICIMGQIGSYVPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQ 956
Query: 869 CTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFT-GS 927
T +SLVI+DELGRGTSTHDGVAIA A LDY++ + + + LF+THY ++ + + F G
Sbjct: 957 ATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSRLASAFPGGE 1016
Query: 928 VGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
+ H+ + S QD+T+LY++ GV+ S+G VA+LA +P + A
Sbjct: 1017 LRNVHMKFTES--------GDHGQDITFLYEIGEGVAHRSYGLNVAKLANIPAGILEVAQ 1068
Query: 988 VIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
V + +LEA++ SR + R + LSD+
Sbjct: 1069 VKSQELEAKI-SRKKMGGVLRGIFQTLSDE 1097
>gi|320032462|gb|EFW14415.1| DNA mismatch repair protein Msh3 [Coccidioides posadasii str.
Silveira]
Length = 1190
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 333/958 (34%), Positives = 526/958 (54%), Gaps = 96/958 (10%)
Query: 77 PTPSSQT-----THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLG 131
P PS++ + K TPLE+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L
Sbjct: 262 PPPSTKARGARKAASTKLTPLEKQVIDIKNKHKDAILVVEVGYKFRFFGEDARIAAKELS 321
Query: 132 IY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA 177
I AHL+ F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA
Sbjct: 322 IVCIPGKLRFDEHPSEAHLNR-FASASIPVHRLHVHVKRLVRAGHKVGVVRQLETAALKA 380
Query: 178 HGPGKAGPFGRGLSALYTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKI 232
G + PF R L+ LYTK T ++ E++ G G + + YL+C+ + +
Sbjct: 381 AGDNRNAPFERKLTHLYTKGTYIDDTEELEGLNAVGANSAAPATGYLLCMTESNAKG--- 437
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQ 292
+G+ V++G++AV+ +TG++++ F DGF+R+ +E LL ++P E LL +S+
Sbjct: 438 ----WGNDEKVQVGILAVQPATGNIIHDSFEDGFMRTEIETRLLHIAPCEFLLIGDVSRA 493
Query: 293 TEKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD 347
T+K++ +G NV RVE S+ + + V S Y + T + +++ D
Sbjct: 494 TDKLVQHLSGSKMNVFGDKVRVERVSKSKTAAAESHSHVSSFYAGRMKATSTIQDERARD 553
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSA 407
+ ++ ++N+P+ L+ I+HLK++ LE + L F+ S M L+
Sbjct: 554 L---------LDKVLNLPEDVTICLSAMIKHLKEYNLENVFDLTKYFQPFSARSHMLLNG 604
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
NTL LE+ +N + + G+L ++ T T +G RLLR+WV PL D+ + R+ AV+E
Sbjct: 605 NTLINLEIYQNQTEQTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKQELEDRVAAVTE 664
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
+ K+SD T + +LS V T D+++ + RI++
Sbjct: 665 L------------------KDSDATPRVGRLKTLLSKVKT------DLEKNLLRIYYGKC 700
Query: 528 TPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK 587
T E + V+Q + + H+ S ++ A+ + PAV+
Sbjct: 701 TRPELLTVLQTLQLIATEFS--HVKSPADAGFDSPVINEAITQL-------PAVLDDVVS 751
Query: 588 LLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
L+ +N +A D + S + E+ + + S + +L+ N + L + +
Sbjct: 752 YLNKINLHSAKADDKFSFFQESE-ETDEITEQKLGIGSVEHDLEEYRNTAAEILCKKKVC 810
Query: 648 FMSVSGITHLIELPANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+++ +GI +LIE+ + K+P +W K++ TKK R+H PEV+ + + E L
Sbjct: 811 YVTNAGIEYLIEVENSSLQMKKIPASWRKISGTKKVSRFHPPEVVNLMRERDQHKEALAA 870
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIH 763
C A+ L + Y F+ +QALA LDC +LA ++ +VRP + D+ +I
Sbjct: 871 ACDKAFLGLLADISTKYQPFRDCIQALATLDCFMSLAAVAAQPGYVRPTYADE---ARIS 927
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
+ GRHP+++ +LLD +VPNDT L + ++TGPNMGGKS Y+RQVALI IM Q+GS
Sbjct: 928 VRGGRHPMVEQLLLDTYVPNDTELGIDGTRALLVTGPNMGGKSSYVRQVALISIMGQIGS 987
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
+VPA SA L +LD +YTRMGA D++ G STF+ EL+E S IL+ T +SLVI+DELGRG
Sbjct: 988 YVPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETSDILKQATPRSLVILDELGRG 1047
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVM 942
TSTHDGVAIA A LDY++ + + LF+THY ++++ F G + H+ + S
Sbjct: 1048 TSTHDGVAIAQAVLDYMVRDIRSLTLFITHYQHLSNLARTFPNGELRNVHMKFTES---- 1103
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
K QD+T+LY+V GV+ S+G VA+LA +P S + A +A LE ++ +
Sbjct: 1104 ----GKDGQDITFLYEVGEGVAHRSYGLNVARLANIPSSVLDVAYTKSADLEEKIKRK 1157
>gi|296424353|ref|XP_002841713.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637960|emb|CAZ85904.1| unnamed protein product [Tuber melanosporum]
Length = 1161
Score = 554 bits (1427), Expect = e-154, Method: Compositional matrix adjust.
Identities = 349/932 (37%), Positives = 504/932 (54%), Gaps = 121/932 (12%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------------- 133
KK TPLE+QVVE+K K PD LL+IEVGYKFRFFGEDA A++VL I
Sbjct: 248 KKLTPLERQVVEIKRKNPDTLLVIEVGYKFRFFGEDARTASQVLSIMCIPGKMRFDEHSS 307
Query: 134 -AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
+HLD F +ASIPT RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+
Sbjct: 308 ESHLD-KFASASIPTHRLHVHVKRLVTAGHKVGVVRQVETAALKAAGDNRNAPFERKLTN 366
Query: 193 LYTKATL------EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR-- 244
LYTK T + G G + +++C+ + G G G D +
Sbjct: 367 LYTKGTYIDDVDGLDGDLAAGAGSGGAAGTGFMLCIAEKPGG---------GTGMDEKAH 417
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA 304
+G+VAV+ +TGDV+Y EF+DGF+RS +E LL ++P E L+ L+K TEK++ AG
Sbjct: 418 VGIVAVQPATGDVIYDEFDDGFMRSEIETRLLHIAPCEFLIVGELTKATEKLVSHLAGST 477
Query: 305 SNV--------RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRS 356
+ V RVE +D I A + V Y D L ++ D PE
Sbjct: 478 TTVLGDQIRIERVE-GKKDAKIL--APSHVSKFYA----DKL-----KSADSPEAAESNR 525
Query: 357 AIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVL 416
+E +MN+PDL L+ I HL +GLE I L F+S S M L+ NTL LE+
Sbjct: 526 LLEIVMNLPDLVTICLSALITHLSSYGLEHIFDLTKYFKSFSARSHMLLNGNTLSSLEIY 585
Query: 417 RNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYR 476
RN ++ S G+L ++ T T +G R LR+WV PL D+ + R++AV EI
Sbjct: 586 RNQTDFSTKGSLFWTLDRTKTKFGKRQLRKWVGRPLLDKERLEERIEAVEEI-------- 637
Query: 477 TSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVM 536
K +E + +LS + S D+++G+ RI++ + E ++++
Sbjct: 638 ----------KGGKSPKLE-RLRELLSKI------SYDLEKGLIRIYYGKCSRPELLSIL 680
Query: 537 QAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA 596
Q + +D SK L+ AL A+ P + L N
Sbjct: 681 QTLNRIANTFPP--VDKPEDVGFNSKILNEAL-------ANLPRIKDDVEAYLDVFNHSQ 731
Query: 597 ADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
A + D + + + + + + + +L+ +N L R + ++SVSG+ +
Sbjct: 732 AAKDDKYDFFKDGD-NYEAINEHKMGIAGVEGDLNEHLNEIAAVL-KRKVVYVSVSGVEY 789
Query: 657 LIELPANFK-----VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
L+E+ +N K VP W K+N T+K R+H+PEV+ L + E L C A+
Sbjct: 790 LVEV-SNEKNILKSVPATWVKMNGTRKVSRFHTPEVIKLLRERDQHKESLAAECNRAFAK 848
Query: 712 FLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPV 771
FL E Y EF+ VQ+LA LDCL +LA ++ +V+P F + EP I + GRHP+
Sbjct: 849 FLAEISTKYQEFRDCVQSLATLDCLISLAAVANQPGYVKPEFTE--EPC-IEVREGRHPM 905
Query: 772 LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
++ +LLD +VPND +L ++++ I+TGPNMGGKS ++RQVALI IMAQVGS+VPAS+A
Sbjct: 906 VEQLLLDAYVPNDIHLFSDKQRAMIVTGPNMGGKSSFVRQVALIAIMAQVGSYVPASAAR 965
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
+ +LD ++TRMGA D++ G STF+ ELNE S IL+ T +SLVI+DELGRGTSTHDGVA
Sbjct: 966 VGMLDAVFTRMGAFDNMMAGESTFMVELNETSDILKQATNRSLVILDELGRGTSTHDGVA 1025
Query: 892 IAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
IA A LDY++ K M LF + H+ + ++ +
Sbjct: 1026 IANAVLDYVITELKSMCLF----------------NAMNAHMKFEEAN--------DGTE 1061
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCI 983
++T+LY++ GV+ S+G VA+LA LP CI
Sbjct: 1062 NITFLYQIGEGVAHRSYGLNVARLAGLPQRCI 1093
>gi|226289518|gb|EEH45022.1| DNA mismatch repair protein Msh3 [Paracoccidioides brasiliensis Pb18]
Length = 1157
Score = 554 bits (1427), Expect = e-154, Method: Compositional matrix adjust.
Identities = 337/956 (35%), Positives = 520/956 (54%), Gaps = 97/956 (10%)
Query: 70 PHTLNPIPTPS-----SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAE 124
P+ +P PS ++ K TP+E+Q++E+K K+ D +L++EVGYKFRFFGEDA
Sbjct: 218 PNADEDVPPPSRTGRGAKKISASKLTPMERQIIEIKKKHMDTVLVVEVGYKFRFFGEDAR 277
Query: 125 MAAKVLGIY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQT 170
+AAK L I AHL F +ASIP RL+VHV+RLV AG+KVGVV+Q
Sbjct: 278 VAAKELSIVCIPGKFRFDEHPSEAHLTR-FASASIPVHRLHVHVKRLVAAGYKVGVVRQL 336
Query: 171 ETAAIKAHGPGKAGPFGRGLSALYTKAT-LEAAEDVGG---GEDGCGGESNYLVCVVDDD 226
ETAA+KA G + PF R L+ LYTK T ++ ED+ G + Y++C+ + +
Sbjct: 337 ETAALKAAGDNRNAPFVRKLTNLYTKGTYIDDVEDLEGPRCNSSSVSTSTGYMLCMTESN 396
Query: 227 GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLG 286
+G+ V +G+VAV+ +TGDV+Y +F DGF+RS +E LL ++P E ++
Sbjct: 397 AKG-------WGNDEKVHVGIVAVQPATGDVIYDDFEDGFMRSEIETRLLHIAPCEFIIV 449
Query: 287 QPLSKQTEKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNN 341
+SK TEK++ +G +N+ RVE SR + + V S Y S
Sbjct: 450 GEMSKATEKLVRHLSGSKTNIFGDKMRVESVSRLKNAAVESHSHVASFYA-------SRM 502
Query: 342 EDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSM 401
+ + D H +E ++ +P+ L+ I ++ Q+GLE + L F+ S
Sbjct: 503 KARGTDGDVTATH--LLEKVLRLPEDVTICLSSMIIYMSQYGLEHVFDLTKYFQPFSARS 560
Query: 402 EMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISAR 461
M L+ NTL LE+ +N ++ + G+L ++ T T +G RLLR+WV PL +++ + R
Sbjct: 561 HMLLNGNTLTNLEIYQNQTDHTSKGSLFWTLDRTKTKFGQRLLRKWVGRPLLNKSELEER 620
Query: 462 LDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITR 521
+ A+ E+ ++ + T L S+L+ + D+++ + R
Sbjct: 621 IAAIEELQDTARTVPTER----------------------LKSLLSKV--KADLEKSLIR 656
Query: 522 IFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAV 581
I++ T E + V+Q +L + HI +S +++ + A+ PA+
Sbjct: 657 IYYGRCTRPELLTVLQTMLLISDEF--FHIKSPADLGFSSSAINAVI-------AALPAI 707
Query: 582 IGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQL 641
L+ +N AA Q D N S + E+ + + + L + + L
Sbjct: 708 REDIVTYLNKINAHAAKQDDKYNFFRESE-ETEEILESNLGIADVEHRLKEHCAVAAEIL 766
Query: 642 GMRNLEFMSVSGITHLIEL---PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
G + +++ +V+GI +LIE+ P N K VP +W K++ TKK R+H+PEV+ + +
Sbjct: 767 GKKKVQYATVAGIEYLIEVENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQYIRERDQF 826
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
E L C A+ + L + Y EF+ +QALA LDCL +LA ++ +V+P + D
Sbjct: 827 KEALAAACDKAFHALLADISKKYQEFRDCIQALAKLDCLLSLANIASQPGYVKPTYTDK- 885
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
I I GRHP+++ +LLD+FVPND L ++TGPNMGGKS Y+RQVALI I
Sbjct: 886 --TCISIQRGRHPMVEQLLLDSFVPNDIELQTNETRALLVTGPNMGGKSSYVRQVALITI 943
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
M Q+GS+VPA SA L +LD +YTRMGA D++ G STF+ EL+E + ILR T +SLVI+
Sbjct: 944 MGQIGSYVPADSATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILRQATPRSLVIL 1003
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYL 936
DELGRGTSTHDGVAIA+A LDY++ + + LF+THY ++ F G + H+ +
Sbjct: 1004 DELGRGTSTHDGVAIAHAVLDYMVRDLRSLTLFITHYQSLSSQALNFPEGELRNVHMKF- 1062
Query: 937 TSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAA 991
M+S D +D+T+LY V G + S+G VA+LA +P S + A +A
Sbjct: 1063 --------MESGVDGRDITFLYVVGEGEAHRSYGLNVARLANVPSSVLDVAATKSA 1110
>gi|452980203|gb|EME79964.1| hypothetical protein MYCFIDRAFT_204401 [Pseudocercospora fijiensis
CIRAD86]
Length = 1143
Score = 554 bits (1427), Expect = e-154, Method: Compositional matrix adjust.
Identities = 336/935 (35%), Positives = 508/935 (54%), Gaps = 82/935 (8%)
Query: 74 NPIPTPSSQ--TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLG 131
+P P + T+ K TPLEQ++VELK K+ D LL++EVGYK+R FGEDA +AAKVL
Sbjct: 223 DPAPKKGRKAPTSRKAKLTPLEQRIVELKRKHSDALLVVEVGYKYRLFGEDARVAAKVLS 282
Query: 132 IY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA 177
+ AH+ F +AS PT RL+VHV+RL+NAG KVG+V+Q ETAA+KA
Sbjct: 283 VVCIPGKFRFDEHPSEAHMT-KFASASFPTHRLHVHVKRLINAGHKVGIVRQLETAALKA 341
Query: 178 HGPGKAGPFGRGLSALYTKATLEAAED---VGGGEDGCGGESNYLVCVVDDDGNVGKIRN 234
G K+ F R L+ LYTKAT E+ G G S YL+C+ +
Sbjct: 342 AGANKSKLFERDLTNLYTKATYVDDEEGLGAPSGAAGGAPASGYLLCLTE------SYPK 395
Query: 235 GVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE 294
GV G V++G++AV+ +TGD++Y +F DG++RS LE LL +SPAE L+ LSK T+
Sbjct: 396 GV-GSDEKVQIGLIAVQPATGDIIYDDFEDGWMRSELETRLLHISPAEFLVIGELSKATD 454
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
K L+ Y + R+E + + + + + Y D + + + V
Sbjct: 455 K-LVHYLSGGDDARLERKPKPKTMAAESYSHITKFYA----DKMKTDGPSSSQVESSQGK 509
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLE 414
+ ++ + + + A L+ I HL +GL+ + L F+S S M L+ NTL LE
Sbjct: 510 GTLLDKVHRLSENATICLSAMITHLTDYGLQHVFDLTKCFQSFSARSHMLLNGNTLSSLE 569
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGS 474
+ RN ++ +E G+L ++ T T +G RLLR+WV PL +R + R+ AV E+ E MG+
Sbjct: 570 IYRNQTDQAERGSLFWTLDRTQTKFGRRLLRKWVGRPLLNRARLDERVAAVEELREGMGT 629
Query: 475 YRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA 534
+ +S +L+ D++R + RI+++ E +A
Sbjct: 630 AGVAR----------------------ISQLLSKT--KADLERTLIRIYYKRCARPELLA 665
Query: 535 VMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
+Q LQ + + + + SA+L I +S P + L +N
Sbjct: 666 FLQ-------NLQAIAQEYVHVQTAADAGFESAMLNEAI--SSLPRISDDVLDYLGRMNL 716
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
EAA + D N + + ++ + + + + +LD L + + +++V+ I
Sbjct: 717 EAAKKNDKYNFFRDEH-ETEDITDHKVGIVAVEHDLDDFKTTAANILKRKQVSYVTVAEI 775
Query: 655 THLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+LIEL VP W K++STKK R+H PEV+ L + E L+ C A+ S
Sbjct: 776 DYLIELENTQLNNVPATWTKISSTKKLSRFHPPEVVKLLRERDQHKESLSNACDTAFHSL 835
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVL 772
L E G Y F+ +Q+LA LDCL +LAT+S+ + +P F I I +GRHP++
Sbjct: 836 LSEIGMKYTHFRECIQSLALLDCLFSLATISQQPGYTKPTFTSS---PGIRIEAGRHPMI 892
Query: 773 DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
+ +LLD+FVPN +L + +ITGPNMGGKS Y+R VALI IMAQ+GS+VPA S E+
Sbjct: 893 EQLLLDSFVPNSISLSSSATRALLITGPNMGGKSSYVRSVALIAIMAQIGSYVPAVSCEM 952
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
+LD ++TRMGA D++ +G STF+ E+ E S IL+ T +SLVI+DELGRGTSTHDGVAI
Sbjct: 953 GLLDAVFTRMGAHDNMMKGESTFMVEVGETSDILKQATPKSLVILDELGRGTSTHDGVAI 1012
Query: 893 AYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQ 951
A + L +++E KKC+ LF+THY +A + F + H+ + +
Sbjct: 1013 AQSVLQHVVEEKKCLTLFITHYQTLARLADSFPNHELRNVHMKFT----------EREGA 1062
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRA 986
++T+LY+V GV+ S+G VA+LA LP S + A
Sbjct: 1063 EITFLYEVGEGVAHRSYGLNVARLAGLPRSLLEEA 1097
>gi|451998559|gb|EMD91023.1| hypothetical protein COCHEDRAFT_1176734 [Cochliobolus heterostrophus
C5]
Length = 1096
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 326/943 (34%), Positives = 522/943 (55%), Gaps = 97/943 (10%)
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------- 133
T K TP+E Q +++K K+ D ++++EVGYK++FFGEDA +A+K LGI
Sbjct: 183 TKKASKLTPMEIQYLDIKRKHLDTIIVMEVGYKYKFFGEDARIASKELGIVCIPGKFRYD 242
Query: 134 -----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
AHLD F +AS PT RL VHV+RLV A KVGVV+Q ETAA+KA G + PF R
Sbjct: 243 EHPSEAHLD-KFASASFPTHRLQVHVKRLVQANHKVGVVRQVETAALKAAGNNRNAPFVR 301
Query: 189 GLSALYTKATLEAAEDVGGGE---DGCGGESN---YLVCVVDDDGNVGKIRNGVFGDGFD 242
L+ LYTK T +DV G E +G G + YL+C+ + +G
Sbjct: 302 KLTNLYTKGTY--VDDVEGLETPTEGSGTSTQSTGYLLCITESHAKG-------WGTDEK 352
Query: 243 VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG 302
V++G+VAV+ +TGD++Y +F DGF+RS +E +LL ++PAE L+ LSK T K++ +
Sbjct: 353 VQVGLVAVQPATGDIIYDDFEDGFMRSEIETLLLHIAPAEFLVVGDLSKATNKLIEHLSA 412
Query: 303 PASNV-----RVECASRDCFIGGGALAEVMSLYE-NMGEDTLSNNEDQNMDVPEQGNHRS 356
+NV RVE + + A + + + Y M T +++E Q +
Sbjct: 413 SKTNVFGDRSRVERVEKPKTMAAQAYSHISNFYAGKMKSSTDADSEKQG----------A 462
Query: 357 AIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVL 416
++ + + + L+ I +L ++GLE + L F+ S M L+ NTL LE+
Sbjct: 463 VLDKVHQLSEHVTMCLSAMITYLSEYGLEHVFDLTKYFQPFSARSYMLLNGNTLSSLEIY 522
Query: 417 RNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYR 476
+N ++ + G+L MN T T +G RLLR+WV PL D+ + R+ AV E+ E
Sbjct: 523 QNQTDFTSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKAKLEERIAAVEELKE------ 576
Query: 477 TSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVM 536
G+H TI + ++L + T D+++ + RI+++ T E ++ +
Sbjct: 577 -----GEH-------TIPVDKLKFVLGKIKT------DLEKVLIRIYYKKCTRPELLSAL 618
Query: 537 QAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA 596
QA+ +++ ++ + E+ S LL + ++ P + L +N A
Sbjct: 619 QAL----QEISSQYLSAQTPEQ---SGFSSTLLSEAV--SNVPKIYEDLNGFLDKINASA 669
Query: 597 ADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
A D + + ++ + ++ S +++L++ +LG +++++V+GI +
Sbjct: 670 AKDDDKYSF-FREEHEAEDINDLKLSIASVEDDLNTHRKEAAAKLGKSKVDYVTVAGIEY 728
Query: 657 LIEL----PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
LIE+ P KVP +W ++++TK +R+H+PEV L + E L C A+
Sbjct: 729 LIEVKRKSPEEKKVPASWQQISATKAVLRFHTPEVKRMLQERDQYKESLAAACDRAYMRL 788
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVL 772
L+E Y + + + +LA LD L +LATL+ +V+P F DD +QI+I GRHP++
Sbjct: 789 LEEISSKYQQLRDCIASLATLDALLSLATLANQPGYVKPTFTDD---IQINITGGRHPMV 845
Query: 773 DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
+ +LLD++VPND +L + ++TGPNMGGKS ++R ALI IM Q+GS+VPAS A L
Sbjct: 846 EQLLLDSYVPNDLSLSHDSTRALLVTGPNMGGKSSFVRSAALIAIMGQIGSYVPASEAHL 905
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
+LD ++TRMGA D++ +G STF+ ELNE S IL++ T +SLVI+DELGRGTST DGVAI
Sbjct: 906 GMLDAVFTRMGAFDNMLKGESTFMVELNETSDILKSATPRSLVILDELGRGTSTFDGVAI 965
Query: 893 AYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
A A LDY++ + + LF+THY +A + ++F G + H+ + + +
Sbjct: 966 AEAVLDYVIRDLQSLTLFITHYQHLAKVPSRFPNGQLKNVHMRF---------EEQNGGR 1016
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+V +LY+ G+S S+G VA+LA++P I A V + +LE
Sbjct: 1017 EVVFLYEATEGMSHRSYGLNVARLARVPEKVIDVAQVKSTELE 1059
>gi|154275824|ref|XP_001538757.1| hypothetical protein HCAG_06362 [Ajellomyces capsulatus NAm1]
gi|150413830|gb|EDN09195.1| hypothetical protein HCAG_06362 [Ajellomyces capsulatus NAm1]
Length = 1132
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 330/951 (34%), Positives = 515/951 (54%), Gaps = 116/951 (12%)
Query: 75 PIPTPS--SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI 132
P+P + T K TP+E+Q++++K K+ D LL++EVGYKFRFFGEDA +AAK L I
Sbjct: 236 PVPQKGRGGKKTTTGKLTPMERQIIDIKKKHMDTLLVVEVGYKFRFFGEDARVAAKELSI 295
Query: 133 Y--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH 178
AHL F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA
Sbjct: 296 VCIPGKLRFDEHPSEAHLSR-FASASIPVHRLHVHVKRLVEAGYKVGVVRQLETAALKAA 354
Query: 179 GPGKAGPFGRGLSALYTKAT----LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRN 234
G + PF R L+ LYTK T +E E+ G + YL+C+ + +
Sbjct: 355 GENRNAPFVRKLTNLYTKGTYIDDVEGLEESSGNSGSASTSTGYLLCMAESNAK------ 408
Query: 235 GVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE 294
+G+ V +G+VAV+ +TGDV+Y +F DGF+RS +E LL ++P E L+ +SK TE
Sbjct: 409 -GWGNDEKVHVGIVAVQPATGDVIYDDFEDGFMRSEIEMRLLHIAPCEFLIVGEMSKATE 467
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
K++ +G N + G +V + SN
Sbjct: 468 KLVQHLSGSRMNAK------------GTTGDVAA----------SN-------------- 491
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLE 414
+E ++ +P+ L+ I+H+ +FGLE + L F+ S M L+ NTL LE
Sbjct: 492 --LLEKVLTLPEDVTICLSSMIKHMSEFGLEYVFDLTKYFQPFSARSHMLLNGNTLTNLE 549
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGS 474
+ +N ++ + G+L ++ T T +G RLLR+WV PL D+ + R+ AV E+
Sbjct: 550 IYQNQTDHTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKTELEERVSAVEEL------ 603
Query: 475 YRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA 534
++ T+ + +LS + D+++ + RI++ T E +
Sbjct: 604 ------------QDPSKTVQIERLKGLLSKI------RADLEKSLIRIYYGRCTRPELLT 645
Query: 535 VMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
V+Q + + +H+ +S T+ +A+ A+ PA+ L+ +N+
Sbjct: 646 VLQTLQLIADEY--VHLKSPADLGFSSPTITTAI-------AALPAIRDDVVTYLNKINE 696
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
EAA + D + E+ + + + L + + LG + +++ +V+GI
Sbjct: 697 EAAKKDDKY-CFFREVEETDEITESNLGIADVQHRLQEHCAVAAEILGKKKVQYTTVAGI 755
Query: 655 THLIEL---PANF-KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+LIE+ P N KVP +W K++ TKK R+H+PEV+ + + E L C A+
Sbjct: 756 EYLIEVENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQYMRERDQYKEALAAACDKAFH 815
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+ L + Y F+ + ALA LDCL +LA ++ +++P + D +I + GRHP
Sbjct: 816 ALLADISTKYQSFRDCILALATLDCLLSLANIASQPGYIKPAYTD---KTRISVQRGRHP 872
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++ +LLD +VPND LH + ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA
Sbjct: 873 MVEQLLLDTYVPNDIELHTDETRALLVTGPNMGGKSSYVRQVALISIMGQIGSYVPADSA 932
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGV
Sbjct: 933 TLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGV 992
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKS 949
AIA A LDY++ + + + LF+THY ++ + +F G + H+ + S MD
Sbjct: 993 AIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPKGELRNVHMKFTES-----GMDG-- 1045
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
QD+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1046 -QDITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELEEKIRKK 1095
>gi|255954341|ref|XP_002567923.1| Pc21g08840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589634|emb|CAP95781.1| Pc21g08840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1130
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 333/949 (35%), Positives = 510/949 (53%), Gaps = 102/949 (10%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+QV+E+K + D +L+IEVGYKFRFFGEDA AAK LGI
Sbjct: 208 KLTPMEKQVIEIKRQNMDTVLVIEVGYKFRFFGEDARTAAKELGIVCIPGKFRFDEHPSE 267
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AH+ F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ L
Sbjct: 268 AHIG-RFASASIPVHRLHVHVKRLVTAGHKVGVVRQIETAALKAAGDNRNAPFVRKLTNL 326
Query: 194 YTKATL----EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGV 247
YTK T E + G + Y++C+ + + G G D V +G+
Sbjct: 327 YTKGTYIDDAEGLQGPAPAAGGASPATGYMLCMTETNAK---------GPGNDERVHVGI 377
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
VAV+ +TGDV+Y +F DGF+RS +E LL ++P E+L+ +S+ +EK++ +G NV
Sbjct: 378 VAVQPATGDVIYDDFEDGFMRSEIETRLLHIAPCEILIVGEMSRASEKLVQHLSGSKMNV 437
Query: 308 -----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
R+E A R A + V Y + T + + Q + + ++ ++
Sbjct: 438 FGDAVRLERAQRKKTSAAEAHSHVSGFYAGKMKATSTEEDTQAVKL---------LQNVL 488
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
+P+ L+ I H+ ++GL+ + L F+ S M L+ NTL LE+ +N ++
Sbjct: 489 GLPEQVTICLSAMIEHMTEYGLQHVFDLTKYFQPFSARSHMLLNGNTLVNLEIYQNQTDL 548
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
S G+L ++ T T +G R+LR+WV PL D+ + R +AV E+ + + G
Sbjct: 549 STRGSLFWTLDRTHTRFGQRMLRQWVGRPLLDKVCLQERTNAVEELIDPARAIPVERVRG 608
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
+L V + D++R + RI++ E + V+QA
Sbjct: 609 ------------------LLRKVKS------DLERSLIRIYYGKCERPELLTVLQA---- 640
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
+Q + ++ + T S+L+ I AS P + K L +N AA D
Sbjct: 641 ---MQMIAMEFADIKSPTQTGFQSSLVSEAI--ASLPTIRASVVKFLDKINMHAARTNDK 695
Query: 603 LNLMIISNGQFS------EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
+ ++ ++E S I G +E+ +VSGI +
Sbjct: 696 YTFFREAEETEEIGELKLQIGSTEHGFSEHRKEAASTI-------GRGKVEYSTVSGIEY 748
Query: 657 LIEL----PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
LIE+ PA +VP +W KV+ TK+ R+H+PEV+ + + E L C A+ +
Sbjct: 749 LIEIENNSPALKRVPASWVKVSGTKRVSRFHTPEVIQLIRERDQYKEALAAACDQAYKTL 808
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVL 772
L + Y F+ +Q+LA LDCL +LA +++ +V+P + E +HI GRHP++
Sbjct: 809 LADIAAQYQSFRDCIQSLATLDCLLSLAEIAQQPGYVKPEYT---EEAGLHIEQGRHPMV 865
Query: 773 DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
+ +L D +VPNDTNL + ++TGPNMGGKS Y+RQVALI IMAQ+GS+VPASSA L
Sbjct: 866 EQLLTDTYVPNDTNLQHDGTRALLVTGPNMGGKSSYVRQVALIAIMAQIGSYVPASSARL 925
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
+LD ++TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAI
Sbjct: 926 GLLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAI 985
Query: 893 AYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
A A LD+++ + + LF+THY ++ + F ++ H+ + + G D D+
Sbjct: 986 AQAVLDHMVRSIQSLTLFITHYQHLSRMVHSFPDKALRNVHMRFTET----GNKDKDGDE 1041
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
++T+LY+V GV+ S+G VA+LA LPP+ I A +A+LE + +
Sbjct: 1042 EITFLYEVAEGVAHRSYGLNVARLANLPPAVIDIARQKSAELEESIRRK 1090
>gi|344255402|gb|EGW11506.1| DNA mismatch repair protein Msh3 [Cricetulus griseus]
Length = 851
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 333/883 (37%), Positives = 489/883 (55%), Gaps = 86/883 (9%)
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLE 200
MTASIPT RL VHVRRLV G+KVGVVKQ ETAA+KA G K+ F R L+ALYTK+TL
Sbjct: 1 MTASIPTHRLFVHVRRLVAKGYKVGVVKQMETAALKAIGDNKSSVFSRKLTALYTKSTL- 59
Query: 201 AAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
EDV E ++YL+C+ ++ N + G ++ +G+V V
Sbjct: 60 IGEDVNPLIRLDDSVNIDEVMTETSTSYLLCIYEEKENSKDKKKG------NISIGIVGV 113
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----N 306
+ +TG+VVY F D R LE + SL P ELLL LS+ TE ML+ A S
Sbjct: 114 QPATGEVVYDCFQDSASRLELETRISSLQPVELLLPSHLSELTE-MLIHRATAVSIRDDR 172
Query: 307 VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
+RVE F A V Y + + + QN GI+N+
Sbjct: 173 IRVERMDNTYFEYSHAFQAVTEFY---AREVVDSKGSQNFS------------GIINLEK 217
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEY 425
+ +LA IR+LK+F LE+I+ +F+ LS ME M ++ TL+ LE+L+N ++
Sbjct: 218 PVICSLAAIIRYLKEFNLEKILSKPENFKQLSSGMEFMRINGTTLRNLEILQNQTDMKTK 277
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
G+LL +++HT T +G R L++WVT PL I+ARLDA+S++ S S
Sbjct: 278 GSLLWVLDHTKTSFGRRKLKKWVTQPLLKLRDINARLDAISDVLHSESS----------- 326
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
+ + L + PDI+RG+ I+H+ + EF +++++ + +
Sbjct: 327 ---------------VFEQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKSLSHLKSE 371
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
LQ L S + S LL+ LIL +PA++ L +N++AA GD L
Sbjct: 372 LQALI-------PAVSSLVQSDLLQTLIL--ETPALLSPVEHYLKILNEQAAKVGDKTEL 422
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--AN 663
F + + + +Q + + + RK L +L++++VSG +IE+ A
Sbjct: 423 FK-DLTDFPLIKKRKDEIQEVTQSIQMHLQELRKMLNRPSLQYVTVSGQEFMIEIKNSAV 481
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+P +W KV STK R+H P ++ +L E+L + C A W FL+ FG +Y
Sbjct: 482 SCIPADWVKVGSTKAVSRFHPPFIVENYRRLNQLREQLVLDCSAEWLDFLENFGEHYHTL 541
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFV 781
AV LA +DC+ +LA +++ N+ RP E +I I +GRHP++D +L D FV
Sbjct: 542 CKAVNHLATVDCIFSLAKVAKQGNYCRPTL---QEEKKIVIKNGRHPMIDVLLGEQDQFV 598
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PN T+L + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++D I+TR
Sbjct: 599 PNSTSLSQDSERVMIITGPNMGGKSSYIKQVALIAIMAQIGSYVPAEEATIGIVDAIFTR 658
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
MGA+D+I +GRSTF+EEL + + I+R T QSLVI+DELGRGTSTHDG+AIAYATL+Y +
Sbjct: 659 MGAADNIYKGRSTFMEELTDTAEIIRKATPQSLVILDELGRGTSTHDGIAIAYATLEYFI 718
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLY 957
K + LFVTHYP + +++ + VG YH+ +L S + G M+ D VT+LY
Sbjct: 719 RDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVDEDESKQESGNMEQVPDS-VTFLY 777
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
++ G++ S+G VA+LA +P + +A + +LE V+ R
Sbjct: 778 QITRGIASRSYGLNVAKLADVPGEILKKAAHKSKELEGLVNLR 820
>gi|190359894|sp|Q0UXL8.3|MSH3_PHANO RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
Length = 1119
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 329/964 (34%), Positives = 521/964 (54%), Gaps = 105/964 (10%)
Query: 75 PIPTPS-----SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV 129
P P P+ + T K TP+E Q +++K K+ D ++++EVGYKF+FFGEDA A+K
Sbjct: 199 PAPKPTKGRKGAATKKTSKLTPMELQYLDIKRKHMDTVIVMEVGYKFKFFGEDARTASKE 258
Query: 130 LGIY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAI 175
LGI AH D F +AS P RL VHV+RLV A KVGVV+Q ETAA+
Sbjct: 259 LGIVCIPGKFRYDEHPSEAHYDR-FASASFPVHRLQVHVKRLVKANHKVGVVRQLETAAL 317
Query: 176 KAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGE--SNYLVCVVDDDGNVGKIR 233
KA G + PF R L+ LYTK T +D+ G E G + YL+CV + +
Sbjct: 318 KAAGNNRNTPFVRKLTNLYTKGTY--VDDIEGLETPTAGAQATGYLLCVTETNAKG---- 371
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT 293
+G V++G+VAV+ +TGD++Y +F DGF+RS +E LL ++PAE L+ LSK T
Sbjct: 372 ---WGTDEKVQVGLVAVQPATGDIIYDDFEDGFMRSEIETRLLHIAPAEFLIVGDLSKAT 428
Query: 294 EKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
+K++ + +NV RVE + + A + + + Y D+
Sbjct: 429 DKLIHHLSASKTNVFGDRSRVERVEKPKTMAAQAYSHISNFYA-----------DKMKSS 477
Query: 349 PEQGNHRSAI-EGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSA 407
E G+ + AI + + + + L+ I +L + LE + L F+ S M L+
Sbjct: 478 QEGGSEQGAILDKVHQLSEHVTICLSAMITYLSDYALEHVFDLTKYFQPFSARSYMLLNG 537
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
NTL LE+ +N ++ + G+L M+ T T +G RLLR+WV PL D+ + R+ AV E
Sbjct: 538 NTLSSLEIYQNQTDYTSKGSLFWTMDRTKTRFGQRLLRKWVGRPLIDKERLEERIAAVEE 597
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
+ E G+H TI + ++L + T D+++ + RI+++
Sbjct: 598 LKE-----------GEH-------TIAVDKVKFLLGKIKT------DLEKVLIRIYYKKC 633
Query: 528 TPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILT---ASSPAVIGK 584
+ E +A +Q + Q +++KT + ++L+ ++ P +
Sbjct: 634 SRPELLAALQILQDIASQY------------LSAKTPEQSGFSSILLSEAVSNVPKIYED 681
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
L +N +AA D + ++ + ++ S +++L++ +LG
Sbjct: 682 VNSFLEKINAKAAKDDDKYGFFR-EEFEAEDINDLKLSIASVEDDLNTHRKDAAAKLGKT 740
Query: 645 NLEFMSVSGITHLIELPANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
+++++V+GI +LIE+ KVP +W ++++TK T+R+H+PEV L + E
Sbjct: 741 KVDYVTVAGIEYLIEVKRKSVEEKKVPASWQQISATKTTLRFHTPEVKRMLQERDQYKES 800
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV 760
L C A+ L + Y + V +LA LD L +LATL+ +V+P FV E
Sbjct: 801 LAAACDTAFKRLLDDIAAKYQSLRDCVSSLATLDALLSLATLANQPGYVKPTFV---ETT 857
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
++ I GRHP+++ +LLD +VPND +L + ++TGPNMGGKS Y+R ALI IM Q
Sbjct: 858 ELDIVGGRHPMVEQLLLDAYVPNDVHLSGDATRALLVTGPNMGGKSSYVRSAALIAIMGQ 917
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+GS+VPA SA+L +LD ++TRMGA D++ +G STF+ ELNE + ILR+ T++SL+I+DEL
Sbjct: 918 IGSYVPAESAKLGMLDAVFTRMGALDNMLKGESTFMVELNETADILRSATSRSLIILDEL 977
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTST DGVAIA A LDY++ + LF+THY +A ++ +F G + H+S+
Sbjct: 978 GRGTSTFDGVAIAEAVLDYVIRDVGALTLFITHYQHLARLQDRFNGELKNVHMSF----- 1032
Query: 941 VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS-S 999
+ ++V +LY+V G S S+G VA+LA++P I A V +++LE + S
Sbjct: 1033 ----EERDGGKEVVFLYEVAEGTSHRSYGLNVARLAKVPEKVIETAEVKSSELEESMGIS 1088
Query: 1000 RVQN 1003
RV N
Sbjct: 1089 RVAN 1092
>gi|239614918|gb|EEQ91905.1| DNA mismatch repair protein Msh3 [Ajellomyces dermatitidis ER-3]
Length = 1162
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 333/957 (34%), Positives = 523/957 (54%), Gaps = 106/957 (11%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------ 133
+ + T K TP+E+Q++++K + D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 239 AGKRTTTGKLTPMERQIIDIKKNHMDTVLVVEVGYKFRFFGEDARIAAKELSIVCIPGKL 298
Query: 134 --------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP 185
AHL F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA G + P
Sbjct: 299 RFDEHPSEAHLSR-FASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAALKAAGDNRNAP 357
Query: 186 FGRGLSALYTKATLEAAEDVGGGE------DGCGGESNYLVCVVDDDGNVGKIRNGVFGD 239
F R L+ LYTK T +DV G E + YL+C+ + + G+
Sbjct: 358 FVRKLTNLYTKGTY--IDDVEGLEGPSVSSGSASTSTGYLLCMTESNAKG-------CGN 408
Query: 240 GFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLA 299
V +G+VAV+ +TGDV+Y +F DGF+RS +E LL ++P E L+ +SK TEK++
Sbjct: 409 DEKVHVGIVAVQPATGDVIYDDFEDGFMRSEIETRLLHIAPCEFLIVGEMSKATEKLVQH 468
Query: 300 YAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGE------DTLSNNEDQNMDV 348
+G +NV RVE S+ + + V S Y + D +NN
Sbjct: 469 LSGSKTNVFGDKVRVERVSKSKIAAAESHSHVSSFYAGRMKAKGAVGDAAANN------- 521
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSAN 408
+E ++ +P+ L+ I+H+ ++GLE I L F+ S M L+ N
Sbjct: 522 --------LLEKVLKLPEDVTICLSSMIKHMSEYGLEYIFDLTKYFQPFSARSHMLLNGN 573
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL LE+ +N + + G+L ++ T T +G RLLR+WV PL D++ + R+ AV E+
Sbjct: 574 TLTNLEIYQNQTEHTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKSELEERVAAVEEL 633
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
++ T+ + +LS + D+++ + RI++ T
Sbjct: 634 ------------------QDPSKTVQIERLKGLLSKI------KADLEKSLIRIYYGRCT 669
Query: 529 PSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL 588
E + V+Q + + +H+ +S T++ A+ A+ PA+
Sbjct: 670 RPELLTVLQTLQLIADEY--VHLKSPEDLGFSSPTINRAI-------AALPAIRKDVVTY 720
Query: 589 LSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEF 648
L+ +N +AA + D + + E+ + + + L + + LG + +++
Sbjct: 721 LNKINAQAAKKDDKYCFFREAE-ETDEITESNLGIADVQHRLKEHCAVAAEILGKKKVQY 779
Query: 649 MSVSGITHLIEL---PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIV 704
+V+GI +LIE+ P N K VP +W K++ TKK R+H+PEV+ + + E L
Sbjct: 780 TTVAGIEYLIEVENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQYMRERDQYKEALAAA 839
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHI 764
C A+ + L + Y F+ + ALA LDCL +LA ++ +V+P + D+ +I +
Sbjct: 840 CDKAFHALLADISTKYQSFRDCIVALATLDCLLSLANIASQPGYVKPTYTDE---TRISV 896
Query: 765 CSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
GRHP+++ +LLD++VPND LH + ++TGPNMGGKS Y+RQVALI IM Q+GS+
Sbjct: 897 QRGRHPMVEQLLLDSYVPNDIELHTNKTRALLVTGPNMGGKSSYVRQVALICIMGQIGSY 956
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA SA L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGT
Sbjct: 957 VPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGT 1016
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMG 943
STHDGVAIA A LDY++ + + + LF+THY ++ + +F G + H+ + S
Sbjct: 1017 STHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSLAREFPKGELRNVHMKFTES----- 1071
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
MD + D+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1072 GMDGR---DITFLYEVGEGVAHRSYGLNVARLAHVPTSVLDVARTKSAELEEKIRKK 1125
>gi|327352357|gb|EGE81214.1| DNA mismatch repair protein Msh3 [Ajellomyces dermatitidis ATCC
18188]
Length = 1162
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 333/957 (34%), Positives = 523/957 (54%), Gaps = 106/957 (11%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------ 133
+ + T K TP+E+Q++++K + D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 239 AGKRTTTGKLTPMERQIIDIKKNHMDTVLVVEVGYKFRFFGEDARIAAKELSIVCIPGKL 298
Query: 134 --------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP 185
AHL F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA G + P
Sbjct: 299 RFDEHPSEAHLSR-FASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAALKAAGDNRNAP 357
Query: 186 FGRGLSALYTKATLEAAEDVGGGE------DGCGGESNYLVCVVDDDGNVGKIRNGVFGD 239
F R L+ LYTK T +DV G E + YL+C+ + + G+
Sbjct: 358 FVRKLTNLYTKGTY--IDDVEGLEGPSVSSGSASTSTGYLLCMTESNAKG-------CGN 408
Query: 240 GFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLA 299
V +G+VAV+ +TGDV+Y +F DGF+RS +E LL ++P E L+ +SK TEK++
Sbjct: 409 DEKVHVGIVAVQPATGDVIYDDFEDGFMRSEIETRLLHIAPCEFLIVGEMSKATEKLVQH 468
Query: 300 YAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGE------DTLSNNEDQNMDV 348
+G +NV RVE S+ + + V S Y + D +NN
Sbjct: 469 LSGSKTNVFGDKVRVERVSKSKIAAAESHSHVSSFYAGRMKAKGAVGDAAANN------- 521
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSAN 408
+E ++ +P+ L+ I+H+ ++GLE I L F+ S M L+ N
Sbjct: 522 --------LLEKVLKLPEDVTICLSSMIKHMSEYGLEYIFDLTKYFQPFSARSHMLLNGN 573
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL LE+ +N + + G+L ++ T T +G RLLR+WV PL D++ + R+ AV E+
Sbjct: 574 TLTNLEIYQNQTEHTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKSELEERVAAVEEL 633
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
++ T+ + +LS + D+++ + RI++ T
Sbjct: 634 ------------------QDPSKTVQIERLKGLLSKI------KADLEKSLIRIYYGRCT 669
Query: 529 PSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL 588
E + V+Q + + +H+ +S T++ A+ A+ PA+
Sbjct: 670 RPELLTVLQTLQLIADEY--VHLKSPEDLGFSSPTINRAV-------AALPAIRKDVVTY 720
Query: 589 LSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEF 648
L+ +N +AA + D + + E+ + + + L + + LG + +++
Sbjct: 721 LNKINAQAAKKDDKYCFFREAE-ETDEITESNLGIADVQHRLKEHCAVAAEILGKKKVQY 779
Query: 649 MSVSGITHLIEL---PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIV 704
+V+GI +LIE+ P N K VP +W K++ TKK R+H+PEV+ + + E L
Sbjct: 780 TTVAGIEYLIEVENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQYMRERDQYKEALAAA 839
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHI 764
C A+ + L + Y F+ + ALA LDCL +LA ++ +V+P + D+ +I +
Sbjct: 840 CDKAFHALLADISTKYQSFRDCIVALATLDCLLSLANIASQPGYVKPTYTDE---TRISV 896
Query: 765 CSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
GRHP+++ +LLD++VPND LH + ++TGPNMGGKS Y+RQVALI IM Q+GS+
Sbjct: 897 QRGRHPMVEQLLLDSYVPNDIELHTNKTRALLVTGPNMGGKSSYVRQVALICIMGQIGSY 956
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA SA L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGT
Sbjct: 957 VPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGT 1016
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMG 943
STHDGVAIA A LDY++ + + + LF+THY ++ + +F G + H+ + S
Sbjct: 1017 STHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSLAREFPKGELRNVHMKFTES----- 1071
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
MD + D+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1072 GMDGR---DITFLYEVGEGVAHRSYGLNVARLAHVPTSVLDVARTKSAELEEKIRKK 1125
>gi|295656832|ref|XP_002789000.1| DNA mismatch repair protein Msh3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285446|gb|EEH41012.1| DNA mismatch repair protein Msh3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1148
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 329/928 (35%), Positives = 500/928 (53%), Gaps = 120/928 (12%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+Q++E+K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 270 KLTPMERQIIEIKKKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKFRFDDHPSE 329
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHL F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA G + PF R L+ L
Sbjct: 330 AHLTR-FASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAALKAAGDNRNAPFVRKLTNL 388
Query: 194 YTKAT----LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
YTK T +E E +G + YL+C+ + + +G+ V +G+VA
Sbjct: 389 YTKGTYIDDIEDLEGLGCNSSSVSTSTGYLLCMTESNAKG-------WGNDEKVHVGIVA 441
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRV 309
V+ +TGDV+Y +F DGF+RS +E LL ++P E L+ +SK TEK++ +G +
Sbjct: 442 VQPATGDVIYDDFEDGFMRSEIETRLLHIAPCEFLIVGEMSKATEKLVQHLSG------I 495
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
RD H +E I+ +P+
Sbjct: 496 RGTDRDV----------------------------------TATH--LLEKILRLPEDVT 519
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
L+ I ++ ++GLE + L F+ S M L+ NTL LE+ +N ++ + G+L
Sbjct: 520 ICLSSMIIYMSEYGLEHVFDLTKYFQPFSARSHMLLNGNTLTNLEIYQNQTDHTSKGSLF 579
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
++ T T +G RLLR+WV PL ++N + R+ A+ E+ ++ + T
Sbjct: 580 WTLDRTKTKFGQRLLRKWVGRPLLNKNELEERIAAIEELRDTASTVSTER---------- 629
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
L S+L+ + D+++ + RI++ T E + V+Q + +
Sbjct: 630 ------------LKSLLSKV--KADLEKSLIRIYYGRCTRPELLTVLQTMQLISDEF--F 673
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
H+ +S T+++ + A+ PA+ L+ +N AA Q D N S
Sbjct: 674 HLKSPADLGFSSSTINAVI-------AALPAIREDVVTYLNKINAHAAKQDDKYNFFRES 726
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL---PANFK- 665
+ E+ + + + L + + LG + +++ +V+GI +LIE+ P N K
Sbjct: 727 E-ETEEIIESNLGIADVEHRLKEHCAVAAEILGKKKVQYATVAGIEYLIEVENSPYNLKK 785
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP +W K++ TKK R+H+PEV+ + + E L C A+ + L + Y EF+
Sbjct: 786 VPASWRKISGTKKVSRFHTPEVVQYIREREQFKEALAAACDKAFLALLADISKKYQEFRD 845
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDT 785
+QALA LDCL +LA ++ +V+P + D+ I I GRHP+++ +LLD+FVPNDT
Sbjct: 846 CIQALATLDCLLSLANVASQPGYVKPTYTDE---TCISIQRGRHPMVEQVLLDSFVPNDT 902
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA L +LD +YTRMGA
Sbjct: 903 ELQTNETRALLVTGPNMGGKSSYVRQVALITIMGQIGSYVPADSATLGMLDAVYTRMGAF 962
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D++ G STF+ EL+E +YIL+ T +SLVI+DELGRGTSTHDGVAIA A LDY++ +
Sbjct: 963 DNMLAGESTFMVELSETAYILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRDLR 1022
Query: 906 CMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGV 963
+ LF+THY ++ F G + H+ + M+S D +DVT+LY V GV
Sbjct: 1023 SLTLFITHYQSLSSQALNFPEGELRNVHMKF---------MESGVDGRDVTFLYVVGEGV 1073
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAA 991
+ S+G VA+LA +P S + A +A
Sbjct: 1074 AHRSYGLNVARLANVPSSVLDVAATKSA 1101
>gi|330934360|ref|XP_003304515.1| hypothetical protein PTT_17141 [Pyrenophora teres f. teres 0-1]
gi|311318822|gb|EFQ87396.1| hypothetical protein PTT_17141 [Pyrenophora teres f. teres 0-1]
Length = 1134
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 333/945 (35%), Positives = 524/945 (55%), Gaps = 101/945 (10%)
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------- 133
T K TP+E Q +++K K+ D ++++EVGYK++FFGEDA A+K LGI
Sbjct: 221 TKKANKLTPMEMQYLDIKRKHLDTVVIMEVGYKYKFFGEDARTASKELGIVCIPGKFRYD 280
Query: 134 -----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
AHLD F +AS PT RL VHV+RLV A KVGVV+Q ETAA+KA G + PF R
Sbjct: 281 EHPSEAHLDR-FASASFPTHRLQVHVKRLVQANHKVGVVRQVETAALKAAGTNRNTPFVR 339
Query: 189 GLSALYTKATLEAAEDVGGGE-----DGCGGESN-YLVCVVDDDGNVGKIRNGVFGDGFD 242
L+ LYTK T +D+ G E G G +S YL+C+ + + +G
Sbjct: 340 KLTNLYTKGTY--VDDIEGLETPTAGSGAGAQSTGYLLCITESNAKG-------WGTDEK 390
Query: 243 VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG 302
V++G+VAV+ +TGD++Y +F DGFLRS +E LL ++PAE L+ LSK TEK++ +
Sbjct: 391 VQVGLVAVQPATGDIIYDDFEDGFLRSEIETRLLHIAPAEFLVVGHLSKATEKLIQHLSA 450
Query: 303 PASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA 357
+NV RVE + + A + + + Y +Q +D +QG +
Sbjct: 451 SKTNVFGDRSRVERVEKPNTMAAQAYSHISNFYAG------KMKPNQQLDGDKQG---AI 501
Query: 358 IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR 417
++ + + + L+ I +L ++GLE + L F+ S M L+ NTL LE+ +
Sbjct: 502 LDKVHQLSEHVTICLSAMITYLSEYGLEHVFDLTKYFQPFSARSYMLLNGNTLSSLEIYQ 561
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N ++ + G+L MN T T +G RLLR+WV PL D++ + R+ AV E+
Sbjct: 562 NQTDFTSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKSKLEERIAAVEEL--------- 612
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
K+ + TI + ++L + T D+++ + RI+++ T E +A +Q
Sbjct: 613 ---------KDGENTIPVDKLKFMLGKIKT------DLEKVLIRIYYKKCTRPELLAALQ 657
Query: 538 AILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASS---PAVIGKAAKLLSTVNK 594
LQ+ I G+Y ++ K+ + +L+ S P + L +N
Sbjct: 658 T-------LQE--ISGKY---LSVKSPEESGFTSTLLSESVSNVPKIYDHLNSFLEKINA 705
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
AA D + + ++ + ++ S +++L++ +LG +++++V+GI
Sbjct: 706 RAAKDDDKYSFFR-EEHEAEDINDLKLSIASVEDDLNTHRKDAAAKLGKSKVDYVTVAGI 764
Query: 655 THLIEL----PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+LIE+ P KVP +W ++++TK T+R+H+PEV L + E L C A+
Sbjct: 765 EYLIEVKRKAPEEKKVPASWQQISATKTTLRFHTPEVKRMLQERDQYKESLAAACDKAFK 824
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
L++ Y + + V +LA LD L +LA L+ +V+P FVDD ++++I GRHP
Sbjct: 825 DLLEDISSKYQQLRDCVSSLATLDALLSLAALANQPGYVKPTFVDD---IELNITGGRHP 881
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++ ILLDN+VPND +L + +ITGPNMGGKS Y+R ALI IM Q+GS+VPA+ A
Sbjct: 882 MVEQILLDNYVPNDVSLSHDSTRALLITGPNMGGKSSYVRSTALIAIMGQIGSYVPATDA 941
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +LD ++TRMGA D++ +G STF+ ELNE S IL++ T +SL+I+DELGRGTST DGV
Sbjct: 942 RLGMLDAVFTRMGAFDNMLKGESTFMVELNETSDILKSATPRSLIILDELGRGTSTFDGV 1001
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKS 949
AIA A LDY++ + + LF+THY +A + T+F G + H+ + +
Sbjct: 1002 AIAEAVLDYVIRDLQSLTLFITHYQHLAKLTTRFPAGELKNVHMRF---------EEQNG 1052
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++V +LY+ G+S S+G VA+LA++P I A V +A+LE
Sbjct: 1053 GKEVVFLYEATEGISHRSYGLNVARLARVPEKVIDVAEVKSAELE 1097
>gi|330790177|ref|XP_003283174.1| hypothetical protein DICPUDRAFT_52102 [Dictyostelium purpureum]
gi|325086855|gb|EGC40238.1| hypothetical protein DICPUDRAFT_52102 [Dictyostelium purpureum]
Length = 1030
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 338/952 (35%), Positives = 511/952 (53%), Gaps = 108/952 (11%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLEQQ + +K PD +LM+E GYK++FFG+DAE+A KVL IY+++ NF+ ASIP
Sbjct: 95 YTPLEQQFLAIKKDNPDTVLMVECGYKYKFFGDDAEIANKVLNIYSYVAKNFLNASIPCQ 154
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
RL H+RRLV AG+KVGVV+QTETAA+KA K+ PF R L+ +YT +T E
Sbjct: 155 RLYFHLRRLVLAGYKVGVVEQTETAALKAISSSKSQPFERKLTRIYTSSTFIDDE----V 210
Query: 209 EDGCGGES-NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
+D S YLV + + + + VAV I TG+++Y F D +
Sbjct: 211 DDSLQNSSPQYLVSFYEASTSASGTNSSDNTTPSVETISFVAVSIRTGEIIYDTFKDSIM 270
Query: 268 RSGLEAVLLSLSPAELLL--------------GQPLSKQTEKMLLAYAGPASNVRVECAS 313
RS LE L L P+E+L+ G S T K L +Y+ ++ R +
Sbjct: 271 RSQLETALTHLKPSEILMPPSVLKKEKSNTSSGYKFSDLTYKCLKSYSK-CNSARTQNMD 329
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA 373
F AL ++ Y+N NN Q +D I+ IMN + L
Sbjct: 330 NQIFDYDVALMKLQEFYDN-------NNCSQVLD---------HIKSIMN--KYQIICLG 371
Query: 374 LTIRHLKQF-GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+ + +L QF I+ + ++F++ + + L +T+ LE+L N S+ SE G+L+ +M
Sbjct: 372 VLLSYLDQFIHFGSILKVPSNFKAFRTANHLVLPHSTITNLELLTNESDNSEKGSLIWLM 431
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
N T T G R+ W+ PL + I R AV E+ E G S V
Sbjct: 432 NRTSTFSGRRMFTNWLCKPLNQLDSIKERQSAVEELVE--GIKVNSNQVAS--------- 480
Query: 493 IVEPQFYYILSSVLTSLGRS--PDIQRGITRIFHRT-ATPSEFIAVMQAILYAGKQLQQL 549
+T+L +S PD+QR ++R++++ TP EF+ M ++ K++ +L
Sbjct: 481 -------------ITALFKSHIPDLQRNLSRVYYKNQCTPKEFLNTMSSL----KRILEL 523
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL-------LSTVNKEAADQGDL 602
++E T S LL ++ ++ + KL LS +N +AA
Sbjct: 524 -----FKEISKGYTFKSNLLNQIFKIKTNSDDDNQDDKLSERINYFLSNLNHDAAKDYSS 578
Query: 603 LNL----MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS--GITH 656
+N + + ++ ++ +K ++ +EE ++ R +L +LE++ + + +
Sbjct: 579 VNCEKSDLWLDFEKYPKILETKKRIKVIEEEFKKILKEIRYELKKPSLEYLHMPKLNLEY 638
Query: 657 LIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
L+ELP F VP W KV+ST+K IRYH PE+L L L+ E L I + +W SFL E
Sbjct: 639 LVELPPKFAGVPKTWIKVSSTQKAIRYHPPEILEQLKLLSQCRETLKIQAQESWISFLGE 698
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
F Y+ F V ++ LDCL +LA +S +V+P F EP I + GRHPV++ +
Sbjct: 699 FTLDYSLFSNFVHKISNLDCLFSLAKISCMDGYVKPEFTS--EP-GIQVVEGRHPVVEVL 755
Query: 776 LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
L +VPN L + +E IITGPNMGGKS +IRQ +LI IMAQ+G FVPA +L V
Sbjct: 756 LNGTYVPNSVKLSSNKERAMIITGPNMGGKSSFIRQTSLIVIMAQMGCFVPAKECKLGVF 815
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D IYTRMGA D+I++G STF EL E S IL++ T SLVI+DELGRGTSTHDGVA+AY+
Sbjct: 816 DAIYTRMGAHDNIEKGSSTFFIELQETSEILKHATPNSLVILDELGRGTSTHDGVALAYS 875
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD--- 952
TL ++++ KKC LFVTHYP +A +++ + +G YH MG ++ K + D
Sbjct: 876 TLKFIVDEKKCFCLFVTHYPLLAQLESMYPNIIGNYH---------MGFIEKKVESDSEN 926
Query: 953 ----VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
V +LY++V G +++S+G VA +A LP + A++ + +++ ++ R
Sbjct: 927 FIPKVIFLYQLVQGAAQNSYGLNVANMAGLPNEILKIASIKSNEMKETITKR 978
>gi|398394217|ref|XP_003850567.1| hypothetical protein MYCGRDRAFT_45599 [Zymoseptoria tritici IPO323]
gi|339470446|gb|EGP85543.1| hypothetical protein MYCGRDRAFT_45599 [Zymoseptoria tritici IPO323]
Length = 1016
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 341/940 (36%), Positives = 518/940 (55%), Gaps = 73/940 (7%)
Query: 82 QTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------- 133
Q K TPL++QVV+LK K+PD LL++E GYK+R FGEDA +AAKVL I
Sbjct: 95 QRKGKDKLTPLQRQVVDLKRKHPDALLIVEAGYKYRLFGEDARIAAKVLAIMCIPGKYRF 154
Query: 134 ------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFG 187
AHLD F +AS PT RL+VHV+RLV+AG KVG+V+Q ETAA+KA G K+ F
Sbjct: 155 DEHPSEAHLD-RFASASFPTHRLHVHVKRLVSAGHKVGIVRQLETAALKAAGSNKSKIFE 213
Query: 188 RGLSALYTKATLEAAED--VGGGEDGCGG-ESNYLVCVVDDDGNVGKIRNGVFGDGFD-- 242
RGL+ LYTK T ED VGGG DG G + +L+C+ + G G D
Sbjct: 214 RGLTNLYTKGTYIDDEDGLVGGGPDGNGAPATGHLLCLTESYPK---------GAGSDEK 264
Query: 243 VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG 302
V++G++AV+ TGD++Y +F DG++RS LE LL +SP E L+ +SK TEK++ +G
Sbjct: 265 VQIGLIAVQPGTGDIIYDDFEDGWMRSELETRLLHISPCEFLVVGEVSKATEKLVQHLSG 324
Query: 303 PASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
+ R+E A + + + + + Y D L ++ V + ++ +
Sbjct: 325 -GDDARLERAEKPKTMAAMSYSHITKFYA----DKLKDDGPTPSQVEASEEKGTLLDKVH 379
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
+ + A L+ I HL +GL+ + L F+S S M L+ NTL LE+ RN ++
Sbjct: 380 KLSENATICLSAMITHLTDYGLQHVFDLTKCFQSFSARSHMLLNGNTLTSLEIYRNQTDQ 439
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
+E G+L +N T T +G RLLR+WV PL +R + RL AV E+ + G +
Sbjct: 440 TENGSLFWTLNRTQTKFGQRLLRKWVGRPLLERERLDERLAAVEELKDGAGRLGVDK--- 496
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
++S+L + D++R + RI+++ + SE ++++Q +
Sbjct: 497 -------------------ITSLLGKI--RNDLERTLIRIYYKKCSRSELLSLLQTLQMI 535
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
++ + SK ++ A+ AS P + + L+ +N +AA D
Sbjct: 536 AQEYAT--VTSPDAAGFESKVINEAI-------ASLPRIADDVLQYLNRMNAQAARADDK 586
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA 662
+ ++ + + + + +L+ L + + +++VS I +LIELP
Sbjct: 587 YGFF-RDEYETEDITDHKCGIVAVEHDLNEFKATAATLLKRKQVSYVTVSEIDYLIELPQ 645
Query: 663 NF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+ VP +W K++STKK R+H+PEV+ + + E L+ C AA+ + L E Y
Sbjct: 646 DMLKNVPASWVKISSTKKVARFHAPEVIKLIRERDQHKEALSNACDAAFTALLTEIAAQY 705
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
F+ +Q+LA LDCL +LA+++ + +P F D +P I I + RHP+++ ILLD F
Sbjct: 706 QPFRDCIQSLALLDCLLSLASVASQPGYCKPTFSD--QP-GIDIKAARHPMVEQILLDAF 762
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPND +L A+ +ITGPNMGGKS Y+R +AL+ IMAQ+GS+VPA SA L +LD ++T
Sbjct: 763 VPNDIHLSADTTRALLITGPNMGGKSSYVRSIALVAIMAQIGSYVPAKSARLGLLDAVFT 822
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA D++ +G STF+ EL E + +L+ T +SLVI+DELGRGTSTHDGVAIA A L +
Sbjct: 823 RMGAFDNMMKGESTFMVELGETADVLKQATPRSLVILDELGRGTSTHDGVAIAEAVLVDV 882
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
+E KC LF+THY +A K G+ G + G D ++VT+LY+V
Sbjct: 883 VERIKCFTLFITHYQSLARAVEKKWGTEGVDVKNVHMRFTEDGGDDEAGGKNVTFLYEVG 942
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
G + S+G VA+LA LP S + A + ++E E R
Sbjct: 943 EGTAHRSYGLNVARLAGLPKSLLEVAGKRSGEMELEEGRR 982
>gi|190359866|sp|A6RPB6.2|MSH3_BOTFB RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
Length = 1133
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 330/955 (34%), Positives = 524/955 (54%), Gaps = 106/955 (11%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E QV+++K K+ D LL++EVGYKF+FFGEDA AAKVL I +H
Sbjct: 211 TPMELQVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSESH 270
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
L++ F +ASIP RL VH +RLV AG+K+G+V+QTETAA+K G + PF R L+ +YT
Sbjct: 271 LNY-FASASIPVHRLPVHAKRLVAAGYKIGIVRQTETAALKKAGDNRNAPFVRKLTNVYT 329
Query: 196 KAT-------LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
K T L+ + GG G YL+C+ + + +G V +G++
Sbjct: 330 KGTYIDDIDGLDTTDAPSGGAPATG----YLLCITE-------TKAKGWGTDEKVEVGIL 378
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TGDV+Y F DGF+R LE LL ++P ELL+ L+K T+K++ +G ++NV
Sbjct: 379 AVQPATGDVIYDNFEDGFMRGELETRLLHIAPCELLIVGELTKATDKLVQHLSGSSTNVF 438
Query: 308 ----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
RVE + + + + V Y D L ++ N + +E ++
Sbjct: 439 GDRIRVERVGKSKTMAAESYSRVAQFYA----DKLKAHQSSN-----NAREQELLEKVLK 489
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+ + L+ I H+ ++GLE + L F+S S M L+ NTL LE+ N ++ +
Sbjct: 490 LTEPVTICLSAMITHMTEYGLEHVFDLTKYFQSFSARSHMLLNGNTLTSLEIYTNQTDYT 549
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
+ G+L ++ T T +G RLLR+WV PL D+ + R+ AV E+ ++ + +
Sbjct: 550 QKGSLFWTLDKTQTKFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNANTPKV------ 603
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
D+ N+ + V RS D++R + RI++ T E + V+Q +
Sbjct: 604 -DKLNATLREV----------------RS-DLERSLLRIYYGKCTRPELLTVLQTMQRIA 645
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+ H+ S L+ A+ AS PA+ L +N +AA D
Sbjct: 646 NEFA--HVKTPSDAGFESIALNEAV-------ASLPAIGEIVISFLDKINAQAARNDDKY 696
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELP- 661
+ + + + + + + +++L++ + +L + + +++++GI +LIE+P
Sbjct: 697 AFFL-EHYETEAIGDHKCGIGAVEQDLEAHRMVAATKLSKKTPVTYVTIAGIEYLIEVPN 755
Query: 662 ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+ K VP +WAK++ TKK R+H+PEV+ L + E L+ C AA+ +FL E +Y
Sbjct: 756 TDLKNVPASWAKISGTKKMSRFHTPEVIKFLRERDQHKESLSSACDAAFSTFLSEISTHY 815
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
A + + LA LDCL +LAT++ + +P F E I + GRHP+++ +L +
Sbjct: 816 ALIRDTISHLATLDCLLSLATVASLPGYCKPTFTSSTE---ISVIGGRHPMVEQLLPSAY 872
Query: 781 VPNDTNLHAEREYCQ--IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
+PNDT+L ++ + ++TGPNMGGKS Y+RQVALI I+AQ+GS+VPA SA L +LDGI
Sbjct: 873 IPNDTSLSTSPDHTRALLLTGPNMGGKSSYVRQVALISILAQIGSYVPAESARLGLLDGI 932
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
YTRMGA DS+ +STF+ EL+E + IL++ +SLVI+DELGRGTSTHDGVAIA A LD
Sbjct: 933 YTRMGAYDSLFTAQSTFMVELSETASILKSAGPRSLVILDELGRGTSTHDGVAIAEAVLD 992
Query: 899 YLLEHKKCMVLFVTHYPKIA-------------DIKTKFTGSVGTYHVSYLTSHKVMGPM 945
+++ KC+ LF+THY +A ++ KFT VS + K
Sbjct: 993 WVVRETKCLCLFITHYQTLASVARGFEKGKELRNVHMKFTAERNGRRVSNADADK----D 1048
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ D+++T+LY+V GV+ S+G VA+LA++P S + A + +LE +V +
Sbjct: 1049 NEDFDEEITFLYEVGEGVAHRSYGLNVARLARVPKSVLDTAASKSRELETQVKQK 1103
>gi|452837457|gb|EME39399.1| hypothetical protein DOTSEDRAFT_83160 [Dothistroma septosporum NZE10]
Length = 1249
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 349/949 (36%), Positives = 519/949 (54%), Gaps = 77/949 (8%)
Query: 74 NPIPTPSSQTT--HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLG 131
+P P + T KK TP+EQQ+V+LK K+PD LL++E GYK+R FGEDA MAAKVL
Sbjct: 325 SPPPAKKGKKTPARGKKLTPMEQQIVDLKRKHPDALLVVEAGYKYRLFGEDARMAAKVLA 384
Query: 132 I------YAHLDH-------NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH 178
I Y +H F +AS PT RL++HVRRLV+AG KVG+V+Q ETAA+KA
Sbjct: 385 IMCIPGKYRFDEHPSEAHMKRFASASFPTHRLHIHVRRLVSAGHKVGIVRQLETAALKAI 444
Query: 179 GPGKAGPFGRGLSALYTKATLEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKIRN 234
G K+ F RGL+ LYTK T +D G G +G + +L+C+ +
Sbjct: 445 GTNKSKIFERGLTNLYTKGTY--IDDQDGLELSGANGGAPATGHLLCITES------YPK 496
Query: 235 GVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE 294
G+ G V++G+VAV+ STGD++Y +F DG++R LE LL +SP E LL LSK TE
Sbjct: 497 GL-GSDEKVQIGMVAVQPSTGDIIYDDFEDGWMRCELETRLLHISPCEFLLVGELSKATE 555
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
K++ +G + R+E + + + + + Y D L NE + V
Sbjct: 556 KLVQHLSG-GDDARLERVDKPKTMAATSYSHITQFYA----DKLKENEPSSSQVESSQET 610
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLE 414
+ ++ + + + A L+ I HLK +GLE + L F+S S M L+ NTL LE
Sbjct: 611 GTLLDKVHKLSENATICLSAMITHLKDYGLEHVFDLTRYFQSFSARSHMLLNGNTLTSLE 670
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGS 474
+ RN ++ +E G+L +N T T +G RLLR+WV PL D+ + R+ AV E+
Sbjct: 671 IYRNQTDQTERGSLFWTLNRTQTKFGQRLLRKWVGRPLLDKLRLDQRVAAVEEL------ 724
Query: 475 YRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA 534
Q N V + +L V D+++ + RI+++ A E +
Sbjct: 725 --------QAGSANPAVDKIS----RLLGKVRV------DLEKTLIRIYYKRAARPELLL 766
Query: 535 VMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
MQ++ ++ Q+ E S+++ I AS P + + L+ ++
Sbjct: 767 FMQSLQLISQEYVQVTSAAE-------AGFKSSMVGEAI--ASLPRISDEVISYLNRISA 817
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
+AA D N + + + + + + +L+ + L + + +++ + I
Sbjct: 818 QAAKDNDKYNF-FRDEYETEPMTDHKVGIVAVEHDLNEFRTIAANILKRKQVTYVTSADI 876
Query: 655 THLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+LIEL VP +W K+ TKK RYH+PEV+ + + E L+ C A+
Sbjct: 877 DYLIELENTQLKNVPASWIKIGGTKKLSRYHAPEVVKLIRERDQHKEALSNACDDAFTDL 936
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVL 772
L E GG Y F+ +Q+LA LDCL +LA +++ + +P F D I I GRHP++
Sbjct: 937 LNEIGGKYQAFRDCIQSLALLDCLLSLAEVAQQPGYCKPTFTDT---PGISIDQGRHPMV 993
Query: 773 DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
+ +LL FVPND NL A+ +ITGPNMGGKS Y+R VALI IMAQ+GS+VPA SAEL
Sbjct: 994 EQLLLGAFVPNDVNLKADATRTLLITGPNMGGKSSYVRSVALIAIMAQIGSYVPAESAEL 1053
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
+LD ++TRMGA D++ +G STF+ EL E S IL+ T +SLVI+DELGRGTSTHDGVAI
Sbjct: 1054 GLLDAVFTRMGAFDNMMKGESTFMVELGETSDILKQATPRSLVILDELGRGTSTHDGVAI 1113
Query: 893 AYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
A A L Y++ K LF+THY +A + ++ G + H+ + + K G ++S+Q
Sbjct: 1114 AQAVLQYVVSQLKSFTLFITHYQSLARVAEQYPDGELKNVHMRF--TEKESG--RTESEQ 1169
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
DVT+LY+V GV+ S+G VA+LA LP S + A+ + +E E R
Sbjct: 1170 DVTFLYEVGEGVAHRSYGLNVARLAGLPQSLLEEASKRSKAMEEEEVRR 1218
>gi|311249783|ref|XP_003123799.1| PREDICTED: DNA mismatch repair protein Msh3 [Sus scrofa]
Length = 1094
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 343/955 (35%), Positives = 511/955 (53%), Gaps = 126/955 (13%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
PS++ T + YTPLE Q +E+K + D +L +E GYK+RFFGEDAE+AA+ L IY HLDH
Sbjct: 208 PSNKRTKSV-YTPLELQYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDH 266
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
NFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+T
Sbjct: 267 NFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKST 326
Query: 199 LEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
L EDV E ++YL+C+ ++ NV + G ++ +G+V
Sbjct: 327 L-IGEDVNPLVKLDDAVNVDEIMTDTSTSYLLCLCENKENVKDRKKG------NIFIGIV 379
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS--- 305
V+ +TG+VV+ F D RS LE +L L P ELLL LS+ TE ML+ A S
Sbjct: 380 GVQPATGEVVFDSFQDSASRSELETRILCLQPVELLLPSDLSEPTE-MLIHRATAVSVRD 438
Query: 306 -NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
+RVE F A EV Y +D + N Q ++ GI+ +
Sbjct: 439 DRIRVERMDNMYFEYSHAFQEVTEFY---AKDIVDNKGSQ------------SLSGIIKL 483
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGS 423
+ +LA IR+LK+F LE+++ +F+ LSG ME MT++ TL+ LE+L+N ++
Sbjct: 484 EKPVICSLAAIIRYLKEFNLEKVLSKPKNFKQLSGEMEFMTINGTTLRNLEILQNQTDMK 543
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 544 TKGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVVHSESS--------- 594
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
+ + + L + PDI+RG+ I+H+ + EF +++ LY
Sbjct: 595 -----------------VFGQIESHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY-- 634
Query: 544 KQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
H+ E++ + + H S LL+ +L P ++ L +N++AA GD
Sbjct: 635 ------HLKSEFQALIPAVNSHVQSNLLQTCLLEI--PELLSPVEHYLKILNEQAAKNGD 686
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
L F + + + +Q ++ + + RK L + ++++VSG +IE+
Sbjct: 687 KTELF-KDLSDFPVIKKRKDEIQEVTNKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVK 745
Query: 662 --ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
A +P +W KV STK R+HSP ++ L E+L + C A W FL+ F +
Sbjct: 746 NSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFSEH 805
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--L 777
Y AV LA DC+ +LA +++ ++ RP E +I I +GRHPV+D +L
Sbjct: 806 YHSLCKAVHHLATADCIFSLAKVAKQGDYCRPTL---QEERKIVIKNGRHPVIDVLLGEQ 862
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D +VPN T+L + ++ + I+ V + +
Sbjct: 863 DQYVPNSTDLSV-------------------LTRLLCVSIVLDV-----------RLTEK 892
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
TRMGA+D+I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL
Sbjct: 893 KETRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATL 952
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDV 953
++ + K + LFVTHYP + +++ ++ VG YH+ +L S + G D D V
Sbjct: 953 EHFIRDVKSLTLFVTHYPPVCELEKSYSQQVGNYHMGFLVNEDESKQDPGEEDKVPDF-V 1011
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
T+LY++ G + S+G VA+LA +P + +A + +LE V NR KR
Sbjct: 1012 TFLYQITRGSAARSYGLNVAKLADVPGEILKKAASKSKELEGLV-----NRKRKR 1061
>gi|347842345|emb|CCD56917.1| similar to DNA mismatch repair protein msh3 [Botryotinia fuckeliana]
Length = 1133
Score = 544 bits (1402), Expect = e-151, Method: Compositional matrix adjust.
Identities = 330/955 (34%), Positives = 524/955 (54%), Gaps = 106/955 (11%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E QV+++K K+ D LL++EVGYKF+FFGEDA AAKVL I +H
Sbjct: 211 TPMELQVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSESH 270
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
L++ F +ASIP RL VH +RLV AG+K+G+V+QTETAA+K G + PF R L+ +YT
Sbjct: 271 LNY-FASASIPVHRLPVHAKRLVAAGYKIGIVRQTETAALKKAGDNRNAPFVRKLTNVYT 329
Query: 196 KAT-------LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
K T L+ + GG G YL+C+ + + +G V +G++
Sbjct: 330 KGTYIDDIDGLDTTDAPSGGAPATG----YLLCITE-------TKAKGWGTDEKVEVGIL 378
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TGDV+Y F DGF+R LE LL ++P ELL+ L+K T+K++ +G ++NV
Sbjct: 379 AVQPATGDVIYDNFEDGFMRGELETRLLHIAPCELLIVGELTKATDKLVQHLSGSSTNVF 438
Query: 308 ----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
RVE + + + + V Y D L ++ N + +E ++
Sbjct: 439 GDRIRVERVGKSKTMAAESYSRVAQFYA----DKLKAHQSSN-----NAREQELLEKVLK 489
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+ + L+ I H+ ++GLE + L F+S S M L+ NTL LE+ N ++ +
Sbjct: 490 LTEPVTICLSAMITHMTEYGLEHVFDLTKYFQSFSARSHMLLNGNTLTSLEIYTNQTDYT 549
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
+ G+L ++ T T +G RLLR+WV PL D+ + R+ AV E+ ++ + +
Sbjct: 550 QKGSLFWTLDKTQTKFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNANTPKV------ 603
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
D+ N+ + V RS D++R + RI++ T E + V+Q +
Sbjct: 604 -DKLNATLREV----------------RS-DLERSLLRIYYGKCTRPELLTVLQTMQRIA 645
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+ H+ S L+ A+ AS PA+ L +N +AA D
Sbjct: 646 NEFA--HVKTPSDAGFESIALNEAV-------ASLPAIGEIVISFLDKINAQAARNDDKY 696
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELP- 661
+ + + + + + + +++L++ + +L + + +++++GI +LIE+P
Sbjct: 697 AFFL-EHYETEAIGDHKCGIGAVEQDLEAHRMVAATKLSKKTPVTYVTIAGIEYLIEVPN 755
Query: 662 ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+ K VP +WAK++ TKK R+H+PEV+ L + E L+ C AA+ +FL E +Y
Sbjct: 756 TDLKNVPASWAKISGTKKMSRFHTPEVIKFLRERDQHKESLSSACDAAFSTFLSEISTHY 815
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
A + + LA LDCL +LAT++ + +P F E I + GRHP+++ +L +
Sbjct: 816 ALIRDTISHLATLDCLLSLATVASLPGYCKPTFTSSTE---ISVIGGRHPMVEQLLPSAY 872
Query: 781 VPNDTNLHAEREYCQ--IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
+PNDT+L ++ + ++TGPNMGGKS Y+RQVALI I+AQ+GS+VPA SA L +LDGI
Sbjct: 873 IPNDTSLSTSPDHTRALLLTGPNMGGKSSYVRQVALISILAQIGSYVPAESARLGLLDGI 932
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
YTRMGA DS+ +STF+ EL+E + IL++ +SLVI+DELGRGTSTHDGVAIA A LD
Sbjct: 933 YTRMGAYDSLFTAQSTFMVELSETASILKSAGPRSLVILDELGRGTSTHDGVAIAEAVLD 992
Query: 899 YLLEHKKCMVLFVTHYPKIA-------------DIKTKFTGSVGTYHVSYLTSHKVMGPM 945
+++ KC+ LF+THY +A ++ KFT VS + K
Sbjct: 993 WVVRETKCLCLFITHYQTLASVARGFEKGKELRNVHMKFTAERNGRRVSNADADK----D 1048
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ D+++T+LY+V GV+ S+G VA+LA++P S + A + +LE +V +
Sbjct: 1049 NEDFDEEITFLYEVGEGVAHRSYGLNVARLARVPKSVLDTAASKSRELETQVKQK 1103
>gi|340924203|gb|EGS19106.1| hypothetical protein CTHT_0057300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1151
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 329/934 (35%), Positives = 516/934 (55%), Gaps = 90/934 (9%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E Q +E+K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 236 KLTPMEIQFLEIKRKHMDTILIVEVGYKFRFFGEDARIAAKELSIVCIPGKLRYDEHPSE 295
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHLD F +ASIP RLNVHV+RLV AG KVG+V+Q ETAA+K G + PF R L+ +
Sbjct: 296 AHLD-RFASASIPVHRLNVHVKRLVAAGHKVGIVRQIETAALKKAGDNRNAPFVRKLTNV 354
Query: 194 YTKATL--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVA 249
YTK T E E GE YL+C+ + G G D V +G++A
Sbjct: 355 YTKGTYIDETGELDQPGEATGASAGGYLLCLTESPAK---------GLGTDEKVDVGLIA 405
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-- 307
V+ +TGD++Y F DGF+R +E LL +SP E L+ LSK T+K++ +G ++NV
Sbjct: 406 VQPATGDIIYDSFEDGFMRREIETRLLHISPCEFLIVGELSKATDKLIQHLSGSSTNVFG 465
Query: 308 ---RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
RVE + + A + V Y + +N +D P+ + +E ++ +
Sbjct: 466 DKSRVERVPKGNTMAAEAYSHVTQFYASK-----TNEKD-----PKSA---ALLEKVLKL 512
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
P+ L+ I HL ++GLE I L F+S S M L+ TL+ LEV RN ++ SE
Sbjct: 513 PESVTICLSAMITHLTEYGLEHIFALTKYFQSFSTRQHMLLNGTTLESLEVYRNATDHSE 572
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+LL ++ T T G RLLR+W+ PL D + R++AV E+ E+ +Y+ +
Sbjct: 573 KGSLLWALDKTQTRPGRRLLRKWIGRPLLDHEQLQERVEAVEELLENQNTYKVDK----- 627
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
L+++L+++ D++R + RI++ AT E ++ +QA
Sbjct: 628 -----------------LTNMLSNI--KADLERSLIRIYYGKATRPELLSTLQA------ 662
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
LQ++ I+ + S L+ I+ S PA+ L +N +AA + D
Sbjct: 663 -LQRISIEYSTLKTPADTGFKSRLIAEAIM--SLPAIGNIVTSYLDKINAQAARKDDKYA 719
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELP-A 662
+ + ++ + + + + + +LD +LG + + +++V+GI +LIE+P
Sbjct: 720 FFL-EEYETDDITKHKLGIAAVEADLDLHRKDAAAKLGKKTPVNYVTVAGIEYLIEVPNT 778
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+ K VP +W K++ TKK R+H+PEV+ +++ E L C AA+ + LK Y
Sbjct: 779 DLKYVPASWVKISGTKKLSRFHTPEVIRLMNERDQHKEALAAACDAAFSNLLKSLAAEYQ 838
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
+ AV +LA +DCL +L+ ++ + +P F+ P I I GRHP+ + L D ++
Sbjct: 839 PLRDAVASLATIDCLLSLSQVASLPGYTKPTFLPPGTPPTITITQGRHPIAEHTLPDGYI 898
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
P T+L + Q+ITGPNMGGKS Y+R VAL+ ++AQ+GSFVPA + L + D IYTR
Sbjct: 899 PFTTSLTSPAPIAQLITGPNMGGKSSYVRAVALLVLLAQIGSFVPADAMSLTLTDAIYTR 958
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
MGA D++ G STF+ E++E + ILR+ T +SLVI+DELGRGTSTHDG AIA+A LD+++
Sbjct: 959 MGARDNLFAGESTFMVEVSETATILRSATPRSLVILDELGRGTSTHDGAAIAHAVLDHVV 1018
Query: 902 EHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
KC+ LF+THY +A + G + H+ + + + + ++++T+LY+V
Sbjct: 1019 RETKCLTLFITHYQSLARVAAGLGDGLIKCVHMRFSAT------TNEEGEEEITFLYEVA 1072
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
GV+ S+G VA+LA++P + A + ++E
Sbjct: 1073 DGVAHRSYGLNVARLARIPRKVLDVAAQKSREME 1106
>gi|240278385|gb|EER41891.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
Length = 1114
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 326/951 (34%), Positives = 509/951 (53%), Gaps = 127/951 (13%)
Query: 75 PIPTPS--SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI 132
P+P + T K TP+E+Q++++K K+ D LL++EVGYKFRFFGEDA +AAK L I
Sbjct: 229 PVPQKGRGGKKTTTGKLTPMERQIIDIKKKHMDTLLVVEVGYKFRFFGEDARVAAKELSI 288
Query: 133 Y--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH 178
AHL F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA
Sbjct: 289 VCIPGKLRFDEHPSEAHLT-RFASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAALKAA 347
Query: 179 GPGKAGPFGRGLSALYTKAT----LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRN 234
G + PF R L+ LYTK T +E E+ G + YL+C+ + +
Sbjct: 348 GENRNAPFVRKLTNLYTKGTYIDDVEGLEESSGNSGSASTSTGYLLCMTESNAKG----- 402
Query: 235 GVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE 294
+G+ V +G+VAV+ +TGDV++ +F DGF+RS +E LL ++P E L+ +SK TE
Sbjct: 403 --WGNDEKVHVGIVAVQPATGDVIHDDFEDGFMRSEIEMRLLHIAPCEFLIVGEMSKATE 460
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
K++ +G +NV G+
Sbjct: 461 KLVQHLSGSKTNV-------------------------FGDK------------------ 477
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLE 414
++ +P+ L+ I+H+ +FGLE + L F+ S M L+ NTL LE
Sbjct: 478 ------VLKLPEDVTICLSSMIKHMSEFGLEYVFDLTKYFQPFSARSHMLLNGNTLTNLE 531
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGS 474
+ +N ++ + G+L ++ T T +G RLLR+WV PL D+ + R+ AV E+
Sbjct: 532 IYQNQTDHTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKTELEERVSAVEEL------ 585
Query: 475 YRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA 534
++ T+ + +LS + D+++ + RI++ T E +
Sbjct: 586 ------------QDPSKTVQIERLKGLLSKI------RADLEKSLIRIYYGRCTRPELLT 627
Query: 535 VMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
V+Q + + +H+ +S T+ +A+ A+ PA+ L+ +N
Sbjct: 628 VLQTLQLIADEY--VHLKSPADLGFSSPTITTAI-------AALPAIRDDVVTYLNKINA 678
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
EAA + D + E+ + + + L + + LG + +++ +V+GI
Sbjct: 679 EAAKKDDKY-CFFREVEETDEITESNLGIADVQHRLQEHCAVAAEILGKKKVQYTTVAGI 737
Query: 655 THLIEL---PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+LIE+ P N K VP +W K++ TKK R+H+PEV+ + + E L C A+
Sbjct: 738 EYLIEVENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQYMRERDQYKEALAAACDKAFH 797
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+ L + Y F+ + ALA LDCL +LA ++ +++P + D +I + GRHP
Sbjct: 798 ALLADISTKYQSFRDFILALATLDCLLSLANIASQPGYIKPAYTD---KTRISVQRGRHP 854
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++ +LLD +VPND LH + ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA
Sbjct: 855 MVEQLLLDTYVPNDIELHTDETRALLVTGPNMGGKSSYVRQVALISIMGQIGSYVPADSA 914
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGV
Sbjct: 915 TLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGV 974
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKS 949
AIA A LDY++ + + + LF+THY ++ + +F G + H+ + S MD
Sbjct: 975 AIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPKGELRNVHMKFTES-----GMDG-- 1027
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
QD+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1028 -QDITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELEEKIRKK 1077
>gi|396478621|ref|XP_003840576.1| similar to DNA mismatch repair protein msh3 [Leptosphaeria maculans
JN3]
gi|312217148|emb|CBX97097.1| similar to DNA mismatch repair protein msh3 [Leptosphaeria maculans
JN3]
Length = 1139
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 335/964 (34%), Positives = 533/964 (55%), Gaps = 101/964 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D ++++EVGYK++FFGEDA A+K LGI AH
Sbjct: 230 TPMEMQYLEIKRKHLDTVIVMEVGYKYKFFGEDARTASKELGIVCIPGKFRYDEHPSEAH 289
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +AS PT RL VHV+RLV A KVGVV+Q ETAA+KA G + PF R L+ LYT
Sbjct: 290 LDR-FASASFPTHRLQVHVKRLVQANHKVGVVRQIETAALKAAGNNRNAPFVRKLTNLYT 348
Query: 196 KATLEAAEDVGGGED-----GCGGESN-YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
K T +DV G E G G +S YL+C+ + + +G V +G+VA
Sbjct: 349 KGTY--VDDVEGLETSTAGAGAGAQSTGYLLCITETNAKG-------WGSDEKVHVGLVA 399
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-- 307
V+ +TGD++Y +F DGF+RS +E +L ++PAE L+ LSK T+K++ + +NV
Sbjct: 400 VQPATGDIIYDDFEDGFMRSEIETRMLHIAPAEFLVVGDLSKATDKLIQHLSASKTNVFG 459
Query: 308 ---RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
RVE + + A + + + Y G+ S D D +QG + ++ + +
Sbjct: 460 DRSRVERVEKPKTMAAQAYSHISNFY--AGKMKSSQGGDSESD--QQG---AILDKVHQL 512
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
+ L+ I +L +GLE + L F+ S M L+ NTL LE+ +N ++ +
Sbjct: 513 SEHVTICLSAMITYLTDYGLEHVFDLTKYFQPFSARSYMLLNGNTLSSLEIYQNATDYTA 572
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L M+ T T +G RLLR+W+ PL D+ + R+ AV E+
Sbjct: 573 KGSLFWTMDRTKTRFGQRLLRKWIGRPLIDKARLEERIAAVEEL---------------- 616
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
K + TI + ++L + T D+++ + RI+++ + E +A +Q
Sbjct: 617 --KEGENTIPVDKLKFLLGRIKT------DLEKVLIRIYYKKCSRPELLAALQT------ 662
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILT---ASSPAVIGKAAKLLSTVNKEAADQGD 601
LQ L +Y ++SKT + K ++L+ ++ P + L +N +AA + D
Sbjct: 663 -LQDL--SSQY---LSSKTPEKSGFKSILLSEAVSNVPKIYEDVNSFLDQINAKAAKEDD 716
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
+ + ++ + ++ S +++L+S +LG +++++V+GI +LIE+
Sbjct: 717 KYSF-FREEHEAEDINDFKLSIASVEDDLNSHKKDAGAKLGKSKIDYVTVAGIEYLIEVK 775
Query: 662 ANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
KVP +W ++++TK T+R+H+PEV L + E L C AA+ L+
Sbjct: 776 RKSTEEKKVPASWQQISATKSTLRFHTPEVKRMLQERDQYKESLAAACDAAFIRLLEAIS 835
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y + + V +LA LD L +LATL+ +V+P F D+ VQI I GRHP+++ ILL
Sbjct: 836 SKYQQLRDCVSSLATLDALLSLATLASQPGYVKPTFTDN---VQIDITGGRHPMVEQILL 892
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D++VPND +L + +ITGPNMGGKS Y+R ALI IM Q+GS+VPA+ A+L +LD
Sbjct: 893 DSYVPNDLHLSHDHTRSLLITGPNMGGKSSYVRSAALIAIMGQIGSYVPATQAKLGMLDA 952
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
++TRMGA D++ QG STF+ EL+E + IL++ T +SLVI+DELGRGTST DGVAIA A L
Sbjct: 953 VFTRMGAFDNMLQGESTFMVELSETADILKSATPRSLVILDELGRGTSTFDGVAIAEAVL 1012
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFT-GSVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
D+++ K + LF+THY +A ++ +F G + H+ + + ++V +L
Sbjct: 1013 DHVVCDLKSLTLFITHYQHLAKLEKRFPGGQLKNVHMRF---------EERAGGKEVVFL 1063
Query: 957 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK--RDLLVKL 1014
Y+ G S S+G VA+LA++P I+ A V + +LE + + A+ + LL++
Sbjct: 1064 YEAAEGTSHRSYGLNVARLARVPEKVIAVAEVKSRELEESMEACRMGNLARMMKGLLMEG 1123
Query: 1015 SDQE 1018
D+E
Sbjct: 1124 GDEE 1127
>gi|156061525|ref|XP_001596685.1| hypothetical protein SS1G_02907 [Sclerotinia sclerotiorum 1980]
gi|190359849|sp|A7EC69.1|MSH3_SCLS1 RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|154700309|gb|EDO00048.1| hypothetical protein SS1G_02907 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1130
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 326/948 (34%), Positives = 517/948 (54%), Gaps = 95/948 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----------AHLDH 138
TP+E QV+++K K+ D LL++EVGYKF+FFGEDA AAKVL I AHL++
Sbjct: 211 TPMELQVLDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEQAHLNY 270
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
F +ASIP RL +H +RLV AG K+G+V+QTETAA+K G + PF R L+ +YTK T
Sbjct: 271 -FASASIPVHRLPIHAKRLVAAGHKIGIVRQTETAALKKAGDNRNTPFVRKLTNVYTKGT 329
Query: 199 -------LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
L++ + GG G YL+C+ + + +G V +G++AV+
Sbjct: 330 YIDDIEGLDSTDAPSGGAPATG----YLLCITE-------TKAKGWGTDEKVEVGILAVQ 378
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV---- 307
+TGD +Y F DGF+RS +E LL ++P E L+ L+K TEK++ +G +NV
Sbjct: 379 PATGDFIYDNFEDGFMRSEIETRLLHIAPCEFLIVGELTKATEKLVQHLSGSTTNVFGDR 438
Query: 308 -RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
RVE + + + + V Y D L ++ N + +E ++ + +
Sbjct: 439 IRVERVEKPKTMAAESYSRVAQFYA----DKLKAHQSSN-----NAREQELLEKVLRLTE 489
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
L+ I H+ ++GLE + L F+S S M L+ NTL LE+ N ++ +E G
Sbjct: 490 PVTICLSAMITHMTEYGLEHVFDLTKYFQSFSARSHMLLNGNTLTSLEIYTNQTDHTEKG 549
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L ++ T T +G RLLR+WV PL D+ + R+ AV E+ +++ + + D+
Sbjct: 550 SLFWTLDKTQTRFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNVNTPKV-------DK 602
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
N+ + V RS D++R + RI++ T E + V+Q + +
Sbjct: 603 LNATLREV----------------RS-DLERSLLRIYYGKCTRPELLTVLQTMQRIANEF 645
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
+ I + S LL + AS P + G L +N +AA + D
Sbjct: 646 AHVKIPSD-------AGFDSVLLNEAV--ASLPEIGGVVISFLEKINAQAARKDDKYAFF 696
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELPAN-- 663
+ + + + +++L++ +L + + +++++GI +LIE+P +
Sbjct: 697 LEEYETEEIGEH-KCGIGAVEQDLEAHRKEAASKLSKKTPVTYVTIAGIEYLIEVPNSDL 755
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
KVP +WAK++ TK R+H+PEV+ L + E L+ C A+ +FL E +YA
Sbjct: 756 KKVPASWAKISGTKSNSRFHTPEVIKFLRERDQHKESLSSACDTAFLAFLAEISTHYALI 815
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
+ + LA LDCL +LA ++ + +P F E I + GRHP+++ +L ++PN
Sbjct: 816 RDTISQLATLDCLLSLAAVASLPGYCKPTFTSTTE---ISVVGGRHPMVEQLLPSTYIPN 872
Query: 784 DTNLHAEREYCQ--IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
DT+L + + + +ITGPNMGGKS Y+RQVALI I+AQ+GS VPA SA L +LDGIYTR
Sbjct: 873 DTSLSTDPDNTRALLITGPNMGGKSSYVRQVALISILAQIGSHVPAESARLGLLDGIYTR 932
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
MGA DS+ +STF+ EL+E + IL++ + +SLVI+DELGRGTSTHDGVAIA A LD+++
Sbjct: 933 MGAYDSLFTAQSTFMVELSETASILKSASPRSLVILDELGRGTSTHDGVAIAEAVLDWVV 992
Query: 902 EHKKCMVLFVTHYPKIADIKTKFT--GSVGTYHVSYLTSHKVMGPMDSKSDQD------- 952
KC+ LF+THY +A + F + H+ + ++ +D+D
Sbjct: 993 RETKCLCLFITHYQTLASVARGFEKGKELRNVHMRFTAERNGKQVSNANADKDGEDVNEE 1052
Query: 953 VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+T+LY+V GV+ S+G VA+LA++P + + A + +LEAEV +
Sbjct: 1053 ITFLYEVGEGVAHRSYGLNVARLARVPKAVLDTAASKSRELEAEVKQK 1100
>gi|189193719|ref|XP_001933198.1| DNA mismatch repair protein MSH3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978762|gb|EDU45388.1| DNA mismatch repair protein MSH3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1133
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 330/945 (34%), Positives = 525/945 (55%), Gaps = 101/945 (10%)
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------- 133
T K TP+E Q +++K K+ D ++++EVGYK++FFGEDA A+K LGI
Sbjct: 220 TKKANKLTPMEIQYLDIKRKHLDTVVIVEVGYKYKFFGEDARTASKELGIVCIPGKFRYD 279
Query: 134 -----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
AHLD F +AS PT RL VHV+RL+ A KVGVV+Q ETAA+KA G + PF R
Sbjct: 280 EHPSEAHLDR-FASASFPTHRLQVHVKRLIQANHKVGVVRQVETAALKAAGTNRNTPFVR 338
Query: 189 GLSALYTKATLEAAEDVGGGE-----DGCGGESN-YLVCVVDDDGNVGKIRNGVFGDGFD 242
L+ LYTK T +D+ G E G G +S YL+C+ + + +G
Sbjct: 339 KLTNLYTKGTY--VDDIEGLETPTAGSGAGAQSTGYLLCITESNAKG-------WGTDEK 389
Query: 243 VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG 302
V++G++AV+ +TGD++Y +F DGFLRS +E LL ++PAE L+ LSK T+K++ +
Sbjct: 390 VQVGLIAVQPATGDIIYDDFEDGFLRSEIETRLLHIAPAEFLVVGDLSKATDKLIQHLSA 449
Query: 303 PASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA 357
+NV RVE + + A + + + Y + + N+ D+ QG +
Sbjct: 450 SKTNVFGDRSRVERVEKPKTMAAQAYSHISNFYAGKMKSSQENDSDK------QG---AI 500
Query: 358 IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR 417
++ + + + L+ I +L ++GLE + L F+ S M L+ NTL LE+ +
Sbjct: 501 LDKVHQLSEHVTICLSAMITYLSEYGLEHVFDLTKYFQPFSARSYMLLNGNTLSSLEIYQ 560
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N ++ + G+L MN T T +G RLLR+WV PL D++ + R+ AV E+ E
Sbjct: 561 NQTDFTSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKSKLEERIAAVEELKE------- 613
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
G++ TI + ++L + T D+++ + RI+++ T E +A +Q
Sbjct: 614 ----GEN-------TIPVDKLKFMLGKIKT------DLEKVLIRIYYKKCTRPELLAALQ 656
Query: 538 AILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASS---PAVIGKAAKLLSTVNK 594
LQ+ I GEY ++ KT + +L+ S P + L +N
Sbjct: 657 T-------LQE--ISGEY---LSVKTPEESGFTSTLLSESVSNVPKIYDDLNSFLEKINA 704
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
AA D + + ++ + ++ S +++L++ +LG +++++V+GI
Sbjct: 705 RAAKDDDKYSFFR-EEHEAEDINDFKLSIASVEDDLNTHRKDAAAKLGKSKVDYVTVAGI 763
Query: 655 THLIEL----PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+LIE+ P KVP +W ++++TK T+R+H+PEV L + E L C A+
Sbjct: 764 EYLIEVKRKAPEEKKVPASWQQISATKTTLRFHTPEVKRMLQERDQYKESLAAACDKAYK 823
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
L++ Y + + V +LA LD L +LA L+ +V+P F DD ++++I GRHP
Sbjct: 824 DLLEDISSKYQQLRDCVSSLATLDALLSLAALANQPGYVKPTFTDD---IELNITGGRHP 880
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++ +LL+N+VPND +L + +ITGPNMGGKS Y+R ALI IM Q+GS+VPA++A
Sbjct: 881 MVEQLLLNNYVPNDLSLSHDSTRALLITGPNMGGKSSYVRSAALIAIMGQIGSYVPATNA 940
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +LD ++TRMGA D++ +G STF+ ELNE S IL++ T +SL+I+DELGRGTST DGV
Sbjct: 941 RLGMLDAVFTRMGAFDNMLKGESTFMVELNETSDILKSATPRSLIILDELGRGTSTFDGV 1000
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKS 949
AIA A LDY++ + + LF+THY +A + T+F G + H+ + +
Sbjct: 1001 AIAEAVLDYVIRDLQSLTLFITHYQHLAKLTTRFPAGELKNVHMRF---------EEQNG 1051
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++V +LY+ G+S S+G VA+LA++P I A V +A LE
Sbjct: 1052 GKEVVFLYEATEGISHRSYGLNVARLARVPEKVIDVAEVKSADLE 1096
>gi|261188295|ref|XP_002620563.1| DNA mismatch repair protein Msh3 [Ajellomyces dermatitidis SLH14081]
gi|239593242|gb|EEQ75823.1| DNA mismatch repair protein Msh3 [Ajellomyces dermatitidis SLH14081]
Length = 1143
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 329/946 (34%), Positives = 516/946 (54%), Gaps = 106/946 (11%)
Query: 91 PLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AHL 136
P Q+++++K + D +L++EVGYKFRFFGEDA +AAK L I AHL
Sbjct: 231 PAPQKIIDIKKNHMDTVLVVEVGYKFRFFGEDARIAAKELSIVCIPGKLRFDEHPSEAHL 290
Query: 137 DHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTK 196
F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA G + PF R L+ LYTK
Sbjct: 291 SR-FASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAALKAAGDNRNAPFVRKLTNLYTK 349
Query: 197 ATLEAAEDVGGGE------DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
T +DV G E + YL+C+ + + G+ V +G+VAV
Sbjct: 350 GTY--IDDVEGLEGPSVSSGSASTSTGYLLCMTESNAKG-------CGNDEKVHVGIVAV 400
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV--- 307
+ +TGDV+Y +F DGF+RS +E LL ++P E L+ +SK TEK++ +G +NV
Sbjct: 401 QPATGDVIYDDFEDGFMRSEIETRLLHIAPCEFLIVGEMSKATEKLVQHLSGSKTNVFGD 460
Query: 308 --RVECASRDCFIGGGALAEVMSLYENMGE------DTLSNNEDQNMDVPEQGNHRSAIE 359
RVE S+ + + V S Y + D +NN +E
Sbjct: 461 KVRVERVSKSKIAAAESHSHVSSFYAGRMKAKGAVGDAAANN---------------LLE 505
Query: 360 GIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNN 419
++ +P+ L+ I+H+ ++GLE I L F+ S M L+ NTL LE+ +N
Sbjct: 506 KVLKLPEDVTICLSSMIKHMSEYGLEYIFDLTKYFQPFSARSHMLLNGNTLTNLEIYQNQ 565
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
+ + G+L ++ T T +G RLLR+WV PL D++ + R+ AV E+
Sbjct: 566 TEHTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKSELEERVAAVEEL----------- 614
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI 539
++ T+ + +LS + D+++ + RI++ T E + V+Q +
Sbjct: 615 -------QDPSKTVQIERLKGLLSKI------KADLEKSLIRIYYGRCTRPELLTVLQTL 661
Query: 540 LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
+ +H+ +S T++ A+ A+ PA+ L+ +N +AA +
Sbjct: 662 QLIADEY--VHLKSPEDLGFSSPTINRAI-------AALPAIRKDVVTYLNKINAQAAKK 712
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIE 659
D + + E+ + + + L + + LG + +++ +V+GI +LIE
Sbjct: 713 DDKYCFFREAE-ETDEITESNLGIADVQHRLKEHCAVAAEILGKKKVQYTTVAGIEYLIE 771
Query: 660 L---PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
+ P N K VP +W K++ TKK R+H+PEV+ + + E L C A+ + L +
Sbjct: 772 VENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQYMRERDQYKEALAAACDKAFHALLAD 831
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
Y F+ + ALA LDCL +LA ++ +V+P + D+ +I + GRHP+++ +
Sbjct: 832 ISTKYQSFRDCIVALATLDCLLSLANIASQPGYVKPTYTDE---TRISVQRGRHPMVEQL 888
Query: 776 LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
LLD++VPND LH + ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA L +L
Sbjct: 889 LLDSYVPNDIELHTNKTRALLVTGPNMGGKSSYVRQVALICIMGQIGSYVPAESATLGML 948
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A
Sbjct: 949 DAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQA 1008
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQDVT 954
LDY++ + + + LF+THY ++ + +F G + H+ + S MD + D+T
Sbjct: 1009 VLDYMVRNLRSLTLFITHYQNLSSLAREFPKGELRNVHMKFTES-----GMDGR---DIT 1060
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1061 FLYEVGEGVAHRSYGLNVARLAHVPTSVLDVARTKSAELEEKIRKK 1106
>gi|336463172|gb|EGO51412.1| hypothetical protein NEUTE1DRAFT_88806 [Neurospora tetrasperma FGSC
2508]
gi|350297638|gb|EGZ78615.1| DNA mismatch repair protein msh-3 [Neurospora tetrasperma FGSC 2509]
Length = 1106
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 330/945 (34%), Positives = 509/945 (53%), Gaps = 95/945 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D LL++EVGYKFRFFGEDA +AA+ L I AH
Sbjct: 187 TPMELQFLEIKRKHMDTLLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHPSEAH 246
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG+KVGVV+Q ETAA+K G + PF R L+ +YT
Sbjct: 247 LD-RFASASIPVHRLPVHAKRLVAAGYKVGVVRQIETAALKKAGDNRNAPFVRKLTNVYT 305
Query: 196 KATL--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVE 251
K T E E GE YL+C+ + G G D V +G++AV+
Sbjct: 306 KGTYIDETGELDQPGETTGASSGGYLLCLTETPAK---------GMGTDEKVNVGIIAVQ 356
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV---- 307
+TGD++Y EF DGF+R +E LL +SP E L+ LSK T+K++ +G ++NV
Sbjct: 357 PATGDIIYDEFEDGFMRREIETRLLHISPCEFLIVGDLSKATDKLIQHLSGSSTNVFGDK 416
Query: 308 -RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA--IEGIMNM 364
RVE + + A + V Y +D+ + RSA + ++ +
Sbjct: 417 SRVERVPKSKTMAAEAYSHVTDFYAGKAKDS---------------DERSAALLNKVLKL 461
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
P+ + L+ I HL ++GL+ I L F+S S M ++ TL+ LEV RN ++ SE
Sbjct: 462 PEAVMICLSAMITHLTEYGLQHIFDLTKYFQSFSTRQHMLINGTTLESLEVYRNATDHSE 521
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+LL ++ T T +G RLLR+W+ PL D+ + R+ AV E+
Sbjct: 522 KGSLLWALDKTHTRFGQRLLRKWIGRPLLDQQHLEERVSAVEELL--------------- 566
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
N+ T + +L S+ D++R + RI++ T E ++ +Q
Sbjct: 567 ---NNQSTANVDKLINMLKSI------KADLERSLIRIYYGKCTRPELLSTLQT------ 611
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
LQ++ + + S LL I+T P++ LS +N EAA + D
Sbjct: 612 -LQKISFEYARVKSPADTGFSSPLLTSAIMTL--PSISPMVTAHLSKINAEAARKDDKYA 668
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPAN 663
+ + +++ + + + +++LD + K LG + + +++V+GI +LIE+ AN
Sbjct: 669 FFL-EQHETEDISEHKLGIAAVEQDLDEHRSEAAKDLGKKVPVNYVTVAGIEYLIEV-AN 726
Query: 664 F---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+VP +WAK++ TKK R+H+P VL + + E L C A+ L + G Y
Sbjct: 727 TDLKRVPASWAKISGTKKVSRFHTPTVLRLIAERDQHKESLASACDQAFSDLLAQIAGEY 786
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
+ AV +L+ LDCL +L+T++ + +P F+ P + I GRHP+ + +L + +
Sbjct: 787 QPLRDAVSSLSTLDCLLSLSTVAALPGYTKPTFLPSSHPSFLSITEGRHPIAEHLLPNGY 846
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
+P +L Q+ITGPNMGGKS Y R VAL+ ++AQ+GSFVPA+S L + D I+T
Sbjct: 847 IPFTMSLGTLPALAQLITGPNMGGKSSYTRAVALLVLLAQIGSFVPATSMALTLSDAIFT 906
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA D++ +G STF+ E++E + ILR T +SLV++DELGRGTSTHDG AIA A L+Y+
Sbjct: 907 RMGARDNLFKGESTFMVEVSETAAILRQATPRSLVVLDELGRGTSTHDGRAIAGAVLEYV 966
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTGSVGT-----YHVSYLTSHKVMGPMDSKSDQDVTY 955
+ C++LFVTHY +A + T G ++ K G D D+++T+
Sbjct: 967 VRDVGCLMLFVTHYQDLAGVAEGLTVGEGEEKKRGVECVHMRFAKGAG-ADKDEDEEITF 1025
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
LY + PGV+ S+G VA+LA++P + A + +LE EV ++
Sbjct: 1026 LYDLAPGVAHRSYGLNVARLARIPRKVLEVAARKSRELEEEVRAK 1070
>gi|302799224|ref|XP_002981371.1| hypothetical protein SELMODRAFT_420794 [Selaginella moellendorffii]
gi|300150911|gb|EFJ17559.1| hypothetical protein SELMODRAFT_420794 [Selaginella moellendorffii]
Length = 638
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 322/749 (42%), Positives = 434/749 (57%), Gaps = 120/749 (16%)
Query: 220 VCVVDD-----DGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAV 274
+CVV++ GN GK + V G FD R GVVAVE STGDV+YG F D R+ LE+
Sbjct: 1 MCVVEEAITEHKGNAGK--DEVRG-SFDARFGVVAVETSTGDVMYGHFMDTVTRTELESR 57
Query: 275 LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMG 334
LL+ +PAELLL LS T+K+L+ YAG A++VR E + F GG +A + Y ++
Sbjct: 58 LLACAPAELLLSASLSASTKKLLMDYAG-AADVRAEKTPENSFENGGTVAALADFYGSLA 116
Query: 335 EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
+ D+ +D + +E +M MP++ V A A +LKQF LE ++ LGA F
Sbjct: 117 -SSKKGCLDEKVD--------AGLEALMTMPEIVVAAFAHIFAYLKQFHLENVLRLGALF 167
Query: 395 RSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCD 454
R +G EMTLS NT++QLE+L N ++G+E G+L +MNHT T +G+RLL+ WVTHPL D
Sbjct: 168 RPFAGQQEMTLSPNTIRQLEILHNQTDGTENGSLFWLMNHTKTAFGARLLKYWVTHPLRD 227
Query: 455 RNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPD 514
R LIS RLDAV+EIAES+G R
Sbjct: 228 RMLISQRLDAVAEIAESIGDKRQ------------------------------------- 250
Query: 515 IQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLIL 574
RI+H+TAT EFI V+ AI+ A Q Q++ + SALL RLI
Sbjct: 251 ------RIYHKTATTYEFINVINAIMKAASQFQRV------------RDARSALLSRLIS 292
Query: 575 TASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLI 634
+S +VI A KL++++N EAA GD +NL + GQ+ EV ++ ++S +E+L+S +
Sbjct: 293 AVTSTSVIDHANKLVTSLNAEAAAAGDKINLFVA--GQYPEVDECKENIKSIEEDLESFL 350
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
RK L NLE++SVSG + L+E+P +VP +W K+NSTKK RYH PEVL A +++
Sbjct: 351 PSYRKLLKCSNLEYLSVSGTSFLVEVPCAQRVPADWVKINSTKKANRYHPPEVLEASERM 410
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
ALA E+L I C AWD FL +F Y+ EF+AAVQALAALDCL++LA +S N+ +VRP FV
Sbjct: 411 ALAKEQLNISCAKAWDMFLTDFTSYHMEFRAAVQALAALDCLYSLAVVSCNQGYVRPEFV 470
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
D E + I GRHPVLD+ L D FVPNDT + E E QIITGP MGGKSCYI QVAL
Sbjct: 471 D--EACLLKIEGGRHPVLDSTLQDAFVPNDTVVSGEGERSQIITGPKMGGKSCYIGQVAL 528
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
I IM+Q+GS+VPA++A+LHV D ++ G + Q
Sbjct: 529 ITIMSQIGSYVPAATAKLHVFDAVFRGDGQNPEGLQ------------------------ 564
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVS 934
GTSTHDG+ IAYA L +LL+ THY + ++ F V YH+S
Sbjct: 565 --------GTSTHDGITIAYAMLHHLLQEVH------THYLNVTEVVKLFPSQVQAYHMS 610
Query: 935 YLTSHKVMGPMDSKSDQD----VTYLYKV 959
YL + G +D S Q+ VT+LYK+
Sbjct: 611 YLVE-SLEGDLDKSSGQEVAQKVTFLYKL 638
>gi|453082233|gb|EMF10281.1| DNA mismatch repair protein MSH3 [Mycosphaerella populorum SO2202]
Length = 1135
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 334/939 (35%), Positives = 515/939 (54%), Gaps = 78/939 (8%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TPL+Q+VV+LK KYPDVLL++EVGYK+R +GEDA +A+KVL +
Sbjct: 218 KLTPLDQKVVDLKRKYPDVLLIVEVGYKYRLYGEDARVASKVLSVVCIPGKMRFDEHPSE 277
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AH+ F AS PT RL+VHV+RL+NAG+KVG+V+Q ETAA+KA G K F R L+ L
Sbjct: 278 AHMTR-FAGASFPTHRLHVHVKRLINAGYKVGIVRQLETAALKAAGTNKGKLFERDLTNL 336
Query: 194 YTKATL----EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
YTKAT E + G +G S +L+C+ + GV G V++G++A
Sbjct: 337 YTKATYIDDEEELDTTLAGAEGGAPASGHLLCLTES------YPKGV-GSDEKVQIGLIA 389
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRV 309
V+ +TG+++Y +F DG++RS LE LL +SPAE ++ +SK T+K++ +G + R+
Sbjct: 390 VQPATGEIIYDDFEDGWMRSELETRLLHISPAEFVIVGEVSKATKKLVQHLSG-GDDARL 448
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
E R + A +++ Y D + E + V + + ++ + + + A
Sbjct: 449 EWKDRPKTMAAQAYSDITKFYA----DKMKAGEPPSTQVQSSQDTGTLLDKVHKLSENAT 504
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
L+ I HL ++GL+ + L SF+S S M L+ NTL LEV RN S+ +E G+L
Sbjct: 505 ICLSAMITHLTEYGLQHVFDLTKSFQSFSARSHMLLNGNTLTSLEVYRNQSDQAEKGSLF 564
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+NHT T +G RLLR+WV PL DR + R+ AV E+ E G
Sbjct: 565 WTLNHTQTRFGRRLLRKWVGRPLLDRARLDERVAAVEELREGAGQAGVER---------- 614
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
++ +LT D++R + RI+++ SE + +Q + ++ +
Sbjct: 615 ------------INRLLTKT--KADLERTLIRIYYKKCARSELLQFLQTLQSVAQEYHFV 660
Query: 550 H--IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+ D +R + ++ + S P + L +N +AA + D N
Sbjct: 661 NSPADAGFRSNMINEAIFSL-----------PQISDDVLDYLGRMNLQAAKENDKYNF-F 708
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPAN--F 664
S + ++ + + + + +L+ L + + +++V+ I +LIEL
Sbjct: 709 RSEHETEDITDHKCGIVAVEHDLNEYKKTATALLKRKVPVSYITVAEIDYLIELDNTQLK 768
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP W K++STKK R+H PEV+ L + E L+ C AA+ S L G Y F+
Sbjct: 769 NVPATWTKISSTKKMSRFHPPEVVKLLRERDQHKESLSNACDAAFASLLTAIGSKYQAFR 828
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
+Q+LA LDCL +LA++++ + +P F D I I +GRHP+++ +LLDNFVPN
Sbjct: 829 DCIQSLALLDCLLSLASVAQQPGYCKPTFSDS---PGISITAGRHPMVEQLLLDNFVPNS 885
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
+L +ITGPNMGGKS Y+R VALI IMAQ+GS+VPA + EL +LD ++TRMGA
Sbjct: 886 IDLAGNATRGLLITGPNMGGKSSYVRSVALIAIMAQIGSYVPAEACELGLLDAVFTRMGA 945
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
D++ +G STF+ EL+E S IL+ T +SLVI+DELGRGTSTHDGVAIA + L +++ +
Sbjct: 946 FDNMMKGESTFMVELSETSDILKQATPRSLVILDELGRGTSTHDGVAIAQSVLQHMVMVQ 1005
Query: 905 KCMVLFVTHY---PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
K + LF+THY +IAD G ++T + +++++T+LY+V
Sbjct: 1006 KSLTLFITHYQSMARIADSMNVADGEAKPLKNVHMTFTENTASKADAAEKEITFLYEVGE 1065
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA LP S + A + +E E + R
Sbjct: 1066 GVAHRSYGLNVARLAGLPKSLLDEAARRSKAMEEEEARR 1104
>gi|242795788|ref|XP_002482664.1| DNA mismatch repair protein Msh3 [Talaromyces stipitatus ATCC 10500]
gi|218719252|gb|EED18672.1| DNA mismatch repair protein Msh3 [Talaromyces stipitatus ATCC 10500]
Length = 1113
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 332/952 (34%), Positives = 522/952 (54%), Gaps = 90/952 (9%)
Query: 77 PTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA-- 134
P + K TP+E+QV+++K K+ D LL++EVGYKFRFFGEDA AAK L I
Sbjct: 190 PKGRQKKKSGSKLTPMEKQVIDIKRKHMDTLLVVEVGYKFRFFGEDARTAAKELSIVCIP 249
Query: 135 ------------HLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGK 182
HLD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G +
Sbjct: 250 GKMRFDEHPSEEHLDR-FASASIPVHRLHVHVKRLVTAGHKVGVVRQLETAALKAAGDNR 308
Query: 183 AGPFGRGLSALYTKAT-LEAAEDVGGGEDGCGGESN---YLVCVVDDDGNVGKIRNGVFG 238
PF R L+ +YTK T ++ AE + G ++ YL+C+ + + + G
Sbjct: 309 NAPFVRKLTNVYTKGTYIDDAEGLSAPAAASAGATHTTGYLLCITESNTS---------G 359
Query: 239 DGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLL 298
V +G+VAV+ +TGD+VY EF DGF+R +E LL ++P E+L+ LS+ T+K++
Sbjct: 360 SDERVHVGIVAVQPATGDIVYDEFEDGFMRGEIETRLLHIAPCEILIVGELSRATDKLVK 419
Query: 299 AYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 353
+G NV RVE +R + V S Y + T + ++ GN
Sbjct: 420 HLSGSKMNVFGDKVRVERVARSKTAAVEGHSRVASFYAEKLKSTETRDD---------GN 470
Query: 354 HRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQL 413
+ +E ++ +PD L+ I HL ++GLE I L F+S S M L+ NTL L
Sbjct: 471 ASALLEKVLQLPDQVTICLSSMIDHLSEYGLEHIFDLTKYFQSFSARSHMLLNGNTLTSL 530
Query: 414 EVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMG 473
E+ +N ++ S G+L IM+ T T +G RLLR+WV PL D+ + R+ AV E+
Sbjct: 531 EIYQNQTDHSSKGSLFWIMDRTRTRFGQRLLRKWVGRPLLDKRQLEERVGAVEELL---- 586
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFI 533
NS+ + + + +LS++ + D++R + R+++ T E +
Sbjct: 587 --------------NSEQSTLTGRLKDLLSNIRS------DLERSLIRVYYGKCTRPELL 626
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN 593
++ + LQ++ Y + S ++ I A+ P + L +N
Sbjct: 627 TLL-------RNLQKIANQFVYIKSPEETGFQSTMISEAI--AALPTIQDDVIMFLDKIN 677
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
AA+ D S + ++ + + S + +L+ ++ + LG + +E+++ +G
Sbjct: 678 AYAAEHDDKYEFFRESE-ESEDITEQKMGIASVEHDLEQHQSVVAEILGKKKVEYVTSAG 736
Query: 654 ITHLIELPANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW 709
I +LIE+ N +VP +W K++ TKK R+H+P+V+ + Q E L C +
Sbjct: 737 IEYLIEVENNSAQIKRVPASWVKISGTKKLSRFHTPDVVQLMRQRDQHKEALAAACDKEY 796
Query: 710 DSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRH 769
L E Y F+ +Q+LA LDCL +LA ++ + +P + D+ +I + GRH
Sbjct: 797 MRLLAEISTRYQSFRDCIQSLALLDCLLSLAAIATQPGYTKPQYTDE---TRIVVEQGRH 853
Query: 770 PVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
P+++ +LLD++VPNDT L ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA S
Sbjct: 854 PMVEQLLLDSYVPNDTALATNETRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAKS 913
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
A L +LD ++TRMGA D++ G STF+ EL+E + IL+ T +SLV++DELGRGTSTHDG
Sbjct: 914 ATLGMLDAVFTRMGAFDNMLTGESTFMVELSETADILKQATPRSLVVLDELGRGTSTHDG 973
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSK 948
VAIA A LDY++ + + LF+THY ++ + F + H+ + S +
Sbjct: 974 VAIAQAVLDYMVRSIRSLTLFITHYQNLSVMTKSFPNNELRNVHMRFTESGE------PG 1027
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
++++T+LY+V GV+ S+G VA+LA LPPS + A +++++LE + R
Sbjct: 1028 GEEEITFLYEVGEGVAHRSYGLNVARLANLPPSVLDLAKLMSSELEERIKRR 1079
>gi|260830061|ref|XP_002609980.1| hypothetical protein BRAFLDRAFT_124403 [Branchiostoma floridae]
gi|229295342|gb|EEN65990.1| hypothetical protein BRAFLDRAFT_124403 [Branchiostoma floridae]
Length = 1226
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 332/976 (34%), Positives = 518/976 (53%), Gaps = 151/976 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTA 143
T +K TPLEQQVV +K++YPD LL++E GYK+R FG+DA +AAK LG +++DHNFMT
Sbjct: 341 TGYRKMTPLEQQVVYIKSEYPDALLVVECGYKYRLFGDDAVVAAKELGFVSYIDHNFMTC 400
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
S P RL VHVRRLV G K + + A + A
Sbjct: 401 SFPNQRLFVHVRRLVAKGHK----GEADIATVAA-------------------------- 430
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
S +L+ + + +++ + + +++G++AV+ STG+++Y F
Sbjct: 431 -----------PSTFLMAICE-----LPVQDAILANRGAIQIGIMAVQPSTGEIIYDGFV 474
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN----VRVECASRDCFIG 319
D RS L + + P ELL+ LS +TE+++ + + +R+E + F
Sbjct: 475 DNKARSELATRISHIQPVELLVPPKLSDETERLIAEITANSPHEDDRMRLERIAHKAFNY 534
Query: 320 GGALAEVMSLY-----ENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI------------- 361
A+ V+ Y E ++ E + P++G + EG
Sbjct: 535 QHAVDRVVEFYGEKTTEERKQEKTPKQETPKQETPKKGKKKLKKEGSPPETAEEKETVLA 594
Query: 362 ----MNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVL 416
+N P V L+ I +LK FGL+R + + + + +E M L++ TL+ LE+
Sbjct: 595 QIFQLNFPQAVVCCLSALIIYLKDFGLQRALRITKNTQPFQQELEHMILNSTTLKNLEIF 654
Query: 417 RNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYR 476
N ++G+E G+L ++NHT T +G+R L+ W+ PL + I R +AV+EI +
Sbjct: 655 ANQTDGNERGSLFWVLNHTKTKFGARTLKTWLGKPLLKLSEIEQRQEAVTEITQDR---- 710
Query: 477 TSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVM 536
+L LG+ PD++RG+ I+H+ + +EF +++
Sbjct: 711 ----------------------LEVLRKAEVMLGKLPDLERGLASIYHKKCSTAEFYSIV 748
Query: 537 QAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA 596
A L ++ ++ + + L S LLK +++ PA + AK LS V ++A
Sbjct: 749 SA-------LDKVAVELHGYQSIADNQLKSNLLKTILIEV--PAFLDGTAKFLSLVKEKA 799
Query: 597 ADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRK-----QLGMRN--LEFM 649
A G + N + QF AV KEE+D + R +L ++N +++
Sbjct: 800 AKLG-MKNDLFEDWSQFP-------AVMKTKEEIDVVTAALRDHRREIRLTLKNPSQDYV 851
Query: 650 SVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSP---EVLTALDQLALANEELTIV 704
V G+ L+E+ N VP +W K+++TK RYH+P E+ T L +L E+LT+
Sbjct: 852 MVGGVEFLVEVRNNLLELVPQDWTKISATKTATRYHTPVAREMYTMLQRL---REQLTLD 908
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHI 764
C+ AW +F+ F Y +++ AV LA LDCL +LA +++ + RP F+D IHI
Sbjct: 909 CQQAWLNFVDTFCENYYQYKKAVDHLATLDCLFSLANVAKQDGYCRPFFIDGG--TLIHI 966
Query: 765 CSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVG 822
GRHPV+D +L + FVPN T + + + C +I+GPNMGGKS YIRQVAL+ IMAQVG
Sbjct: 967 QHGRHPVIDVLLDEQEQFVPNSTQMDGDGKRCMVISGPNMGGKSSYIRQVALMVIMAQVG 1026
Query: 823 SFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGR 882
S+VPA SA L ++D + +RMGASD I GRSTF+ EL EA+ IL + T++SLVI+DELGR
Sbjct: 1027 SYVPAESASLGIVDAVMSRMGASDDIAHGRSTFMVELQEAAEILNHATSRSLVILDELGR 1086
Query: 883 GTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVM 942
GTSTHDGVAIAYATL +L+ KC+ LFVTH+P + +++ + S+ YH+++L ++
Sbjct: 1087 GTSTHDGVAIAYATLQHLVTEVKCLTLFVTHFPPLGELEALYPESMCNYHMAFLVINQGQ 1146
Query: 943 GPMDSKSDQD----------------VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRA 986
+ ++ D VT+LY++VP ++ S+G VAQLA +PPS + A
Sbjct: 1147 EMVSDQTTADGSKNEATKPKAPLPELVTFLYQLVPSMAAHSYGLNVAQLANVPPSILQVA 1206
Query: 987 TVIAAKLEAEVSSRVQ 1002
V + +LE V R Q
Sbjct: 1207 AVKSKELETVVQERRQ 1222
>gi|169601270|ref|XP_001794057.1| hypothetical protein SNOG_03496 [Phaeosphaeria nodorum SN15]
gi|160705896|gb|EAT88701.2| hypothetical protein SNOG_03496 [Phaeosphaeria nodorum SN15]
Length = 1104
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 323/959 (33%), Positives = 513/959 (53%), Gaps = 110/959 (11%)
Query: 75 PIPTPS-----SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV 129
P P P+ + T K TP+E Q +++K K+ D ++++EVGYKF+FFGEDA A+K
Sbjct: 199 PAPKPTKGRKGAATKKTSKLTPMELQYLDIKRKHMDTVIVMEVGYKFKFFGEDARTASKE 258
Query: 130 LGIY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAI 175
LGI AH D F +AS P RL VHV+RLV A KVGVV+Q ETAA+
Sbjct: 259 LGIVCIPGKFRYDEHPSEAHYDR-FASASFPVHRLQVHVKRLVKANHKVGVVRQLETAAL 317
Query: 176 KAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGE--SNYLVCVVDDDGNVGKIR 233
KA G + PF R L+ LYTK T +D+ G E G + YL+CV + +
Sbjct: 318 KAAGNNRNTPFVRKLTNLYTKGTY--VDDIEGLETPTAGAQATGYLLCVTETNAKG---- 371
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT 293
+G V++G+VAV+ +TGD++Y +F DGF+RS +E LL ++PAE L+ ++ +T
Sbjct: 372 ---WGTDEKVQVGLVAVQPATGDIIYDDFEDGFMRSEIETRLLHIAPAEFLI---VASKT 425
Query: 294 EKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 353
RVE + + A + + + Y D+ E G+
Sbjct: 426 NVF-------GDRSRVERVEKPKTMAAQAYSHISNFYA-----------DKMKSSQEGGS 467
Query: 354 HRSAI-EGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQ 412
+ AI + + + + L+ I +L + LE + L F+ S M L+ NTL
Sbjct: 468 EQGAILDKVHQLSEHVTICLSAMITYLSDYALEHVFDLTKYFQPFSARSYMLLNGNTLSS 527
Query: 413 LEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESM 472
LE+ +N ++ + G+L M+ T T +G RLLR+WV PL D+ + R+ AV E+ E
Sbjct: 528 LEIYQNQTDYTSKGSLFWTMDRTKTRFGQRLLRKWVGRPLIDKERLEERIAAVEELKE-- 585
Query: 473 GSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF 532
G+H TI + ++L + T D+++ + RI+++ + E
Sbjct: 586 ---------GEH-------TIAVDKVKFLLGKIKT------DLEKVLIRIYYKKCSRPEL 623
Query: 533 IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILT---ASSPAVIGKAAKLL 589
+A +Q + Q +++KT + ++L+ ++ P + L
Sbjct: 624 LAALQILQDIASQY------------LSAKTPEQSGFSSILLSEAVSNVPKIYEDVNSFL 671
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+N +AA D + ++ + ++ S +++L++ +LG ++++
Sbjct: 672 EKINAKAAKDDDKYGFFR-EEFEAEDINDLKLSIASVEDDLNTHRKDAAAKLGKTKVDYV 730
Query: 650 SVSGITHLIELPANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+V+GI +LIE+ KVP +W ++++TK T+R+H+PEV L + E L C
Sbjct: 731 TVAGIEYLIEVKRKSVEEKKVPASWQQISATKTTLRFHTPEVKRMLQERDQYKESLAAAC 790
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHIC 765
A+ L + Y + V +LA LD L +LATL+ +V+P FV E ++ I
Sbjct: 791 DTAFKRLLDDIAAKYQSLRDCVSSLATLDALLSLATLANQPGYVKPTFV---ETTELDIV 847
Query: 766 SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
GRHP+++ +LLD +VPND +L + ++TGPNMGGKS Y+R ALI IM Q+GS+V
Sbjct: 848 GGRHPMVEQLLLDAYVPNDVHLSGDATRALLVTGPNMGGKSSYVRSAALIAIMGQIGSYV 907
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PA SA+L +LD ++TRMGA D++ +G STF+ ELNE + ILR+ T++SL+I+DELGRGTS
Sbjct: 908 PAESAKLGMLDAVFTRMGALDNMLKGESTFMVELNETADILRSATSRSLIILDELGRGTS 967
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPM 945
T DGVAIA A LDY++ + LF+THY +A ++ +F G + H+S+
Sbjct: 968 TFDGVAIAEAVLDYVIRDVGALTLFITHYQHLARLQDRFNGELKNVHMSF---------E 1018
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS-SRVQN 1003
+ ++V +LY+V G S S+G VA+LA++P I A V +++LE + SRV N
Sbjct: 1019 ERDGGKEVVFLYEVAEGTSHRSYGLNVARLAKVPEKVIETAEVKSSELEESMGISRVAN 1077
>gi|367019680|ref|XP_003659125.1| hypothetical protein MYCTH_2295777 [Myceliophthora thermophila ATCC
42464]
gi|347006392|gb|AEO53880.1| hypothetical protein MYCTH_2295777 [Myceliophthora thermophila ATCC
42464]
Length = 1168
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 346/998 (34%), Positives = 532/998 (53%), Gaps = 122/998 (12%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AAK L I AH
Sbjct: 229 TPMEIQFLDIKRKHMDTILVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEHPSEAH 288
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RLNVHV+RLV AG KVGVV+Q ETAA+K G + PF R L+ +YT
Sbjct: 289 LD-RFASASIPVHRLNVHVKRLVAAGHKVGVVRQLETAALKKAGDNRNAPFVRKLTNVYT 347
Query: 196 KATL--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVE 251
K T E E GE YL+C+ + G G D V +G+VAV+
Sbjct: 348 KGTYIDETGELDQPGEGTGAPAGGYLLCLTESPAK---------GLGADEKVHVGIVAVQ 398
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV---- 307
+TGD+VY +F DGF+R +E LL +SP ELL+ LSK T+K++ +G ++NV
Sbjct: 399 PATGDIVYDDFEDGFMRREIETRLLHISPCELLIVGELSKATDKLVRHLSGSSTNVFGDR 458
Query: 308 -RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA--IEGIMNM 364
RVE + + + + V Y +D G+ RS ++ I+ +
Sbjct: 459 TRVERIPKSKTMAAESYSHVTQFYAGRAKD---------------GDKRSTAILDKILKL 503
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
P+ L+ I HL ++GLE I L F+S S M ++ TL+ LEV RN ++ SE
Sbjct: 504 PESVTICLSAMITHLTEYGLEHIFNLTKYFQSFSTRQHMLINGTTLESLEVYRNATDQSE 563
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+LL ++ T T G RLLR+W+ PL DR + R+ AV E+ E+ +++ +
Sbjct: 564 KGSLLWALDKTRTRPGRRLLRKWIGRPLLDRERLEERVAAVEELLENQSTWKVDK----- 618
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
LS +L+S+ D++R + RI++ T E ++ +Q +
Sbjct: 619 -----------------LSGLLSSI--KADLERSLIRIYYGKCTRPELLSTLQTLQRISM 659
Query: 545 QLQQLHI--DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
+ ++ D ++ +V S+ + S P + + L+ +N EAA + D
Sbjct: 660 EFSRVKTPADTGFKSRVLSEAI-----------CSLPGIGTIVSGYLNKINPEAARKDD- 707
Query: 603 LNLMIISNGQFSEVARARK-AVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIEL 660
G+ +E K + + + +LD+ +L + + +++V+GI +LIE+
Sbjct: 708 -KYTFFREGEETEDIETHKLGIAAVEADLDAHRQDAAAKLSKKTPVTYVTVAGIEYLIEV 766
Query: 661 P-ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG 718
+ K VP +W K++ TKK R+H+PEV+ +++ E L C AA+ LK
Sbjct: 767 SNTDLKHVPASWVKISGTKKLSRFHTPEVVRLMNERDQHREALAAACDAAFADLLKSIAA 826
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
Y + AV +LA LDCL +LA ++ + +P F+ P I I SGRHP+ + L D
Sbjct: 827 EYQPLRDAVSSLATLDCLLSLADVASLPGYTKPSFLPSTSPPTISITSGRHPIAEHTLPD 886
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
++P T L A Q+ITGPNMGGKS Y+R VAL+ ++AQ+GS+VPA + L + D I
Sbjct: 887 GYIPFTTALTAPCPLAQLITGPNMGGKSSYVRAVALLVLLAQIGSYVPADAMSLTLTDAI 946
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
YTRMGA D++ G STF+ E++E + ILR T +SLVI+DELGRGTSTHDG AIA+A LD
Sbjct: 947 YTRMGARDNLFAGESTFMVEVSETAAILRGATPRSLVILDELGRGTSTHDGAAIAHAVLD 1006
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-------- 950
Y++ +C+ LF+THY +A + G+V H+ + + + G D +S
Sbjct: 1007 YVVRETRCLTLFITHYQSLARVAEGLGGAVRCVHMRFEAATRKHG-TDGRSGGRRDDQQD 1065
Query: 951 -----------QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
+++T+LY+V GV+ S+G VA+LA++P + A + ++E V +
Sbjct: 1066 DADGDGGGDGDEEITFLYEVAEGVAHRSYGLNVARLARIPRRVLDVAARKSREMEEGVKA 1125
Query: 1000 RVQNRSAK--RDLLVK-------LSDQEQEAQENMPVS 1028
R + + +D+++K D EQE+Q + VS
Sbjct: 1126 RRLQGAVRLLQDVMLKGAGDDHDGGDGEQESQLDQLVS 1163
>gi|62321343|dbj|BAD94621.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 386
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/406 (65%), Positives = 316/406 (77%), Gaps = 25/406 (6%)
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
KTIRYH PE++ LD+LALA E L IV RA+WDSFLK F YY +F+AAVQALAALDCLH
Sbjct: 1 KTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALAALDCLH 60
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQII 797
+L+TLSRNKN+VRP FVDD EPV+I+I SGRHPVL+TIL DNFVPNDT LHAE EYCQII
Sbjct: 61 SLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVPNDTILHAEGEYCQII 120
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNMGGKSCYIRQVALI IMAQVGSFVPAS A+LHVLDG++TRMGASDSIQ GRSTFLE
Sbjct: 121 TGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLE 180
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
EL+EAS+I+R C+++SLVI+DELGRGTSTHDGVAIAYATL +LL K+C+VLFVTHYP+I
Sbjct: 181 ELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEI 240
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
A+I F GSVGTYHVSYLT K G D DVTYLYK+V G+ SFGFKVAQLAQ
Sbjct: 241 AEISNGFPGSVGTYHVSYLTLQKDKGSYDH---DDVTYLYKLVRGLCSRSFGFKVAQLAQ 297
Query: 978 LPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRV 1037
+PPSCI RA +AAKLEAEV +R +N ++ + E +
Sbjct: 298 IPPSCIRRAISMAAKLEAEVRARERN--------TRMGEPEGHEEPR------------- 336
Query: 1038 EASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELIIR 1083
+E+ ISA DLF +LKFA +++P K+F+FLKHA IA ++ ++
Sbjct: 337 -GAEESISALGDLFADLKFALSEEDPWKAFEFLKHAWKIAGKIRLK 381
>gi|402225420|gb|EJU05481.1| hypothetical protein DACRYDRAFT_74703 [Dacryopinax sp. DJM-731 SS1]
Length = 1011
Score = 534 bits (1376), Expect = e-148, Method: Compositional matrix adjust.
Identities = 322/923 (34%), Positives = 514/923 (55%), Gaps = 70/923 (7%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q+ +LK YPD LL++EVGYK+RFFGEDA +A+K LGI A + NFM+ASIP
Sbjct: 102 YTPLENQIRDLKKAYPDNLLLVEVGYKYRFFGEDATIASKELGIAAFPNRNFMSASIPVH 161
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
R +VHV++LV+ G+KVGV+ Q ETAA+K G ++GPF R L ALYT AT D
Sbjct: 162 RRSVHVKKLVSRGYKVGVIGQMETAALKKVGDNRSGPFVRELQALYTPATYVDETDSLDD 221
Query: 209 EDGCGGESNY-LVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
+D G + L+C+++D +R G+ D V +G+V+V STGD+VY +F DG +
Sbjct: 222 DDAFGQTTTRPLLCLIED------LRGGMGADE-RVAIGLVSVVPSTGDIVYDDFQDGHM 274
Query: 268 RSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPAS---NVRVECASRDCFIGGGAL 323
RS LE L L+P EL+L + LSK TE++L +AG ++ ++R+E ++ +
Sbjct: 275 RSELETRLSHLNPCELILPSKGLSKTTERLLNNFAGNSNAGGSIRLERIAK--------I 326
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
+ S ++ + D S ++ + E + I +P V ALA + HL FG
Sbjct: 327 MDYTSAFQ-LTSDFYSKKDEGSPRASESFRSGKLMTAIAELPQNVVIALAHCVNHLTAFG 385
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
L F + M L+ NTL LE+ RN + SE G+L+ ++++T T +GSRL
Sbjct: 386 LADSFLRTKFFAEFTTKAHMLLAGNTLSNLELFRNQDDFSERGSLMWVLDNTKTKFGSRL 445
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LR WV PL D ++ R+DAV E+ + + ++
Sbjct: 446 LRSWVGGPLIDLKALNERIDAVEELLSTSSA--------------------------VIE 479
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
+ T L +PD+ + + R+ + P E +++ A + E+ +S
Sbjct: 480 QLRTVLKGTPDLVKSLCRVQYGKCAPRELASLLYAFSRIARAFPPF-------EQSSSVG 532
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
S +L ++ S P+ + +L+ ++ A + ++L + +F + + +
Sbjct: 533 FKSHILNDIVY--SLPSALETVTQLMQPLDLRKARDDNKVDLWLDPQ-KFPAIQDTKDCI 589
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK--VPLNWAKVNSTKKTI 680
+ + EL ++ RK + ++++ +++GI +LIE+ A K VP +W++++ST+
Sbjct: 590 ATVEYELGEHLHEIRKTIKQPSVQYKTIAGIEYLIEVSGAQVKKLVPADWSRISSTRTAT 649
Query: 681 RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA 740
R+H+P+V L++ E LT A+ SFL+E Y F+ LA DCL +LA
Sbjct: 650 RFHTPQVRRMLEERERYKESLTAEAEKAYQSFLQEVSENYDVFRDVTNKLALADCLLSLA 709
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGP 800
+ + + + RP FV+D +I I GRHP+++ ++ D FVPN L + +IITGP
Sbjct: 710 IVGKQQGYCRPRFVEDD---RIDIVEGRHPMVEALMSDPFVPNTVTLGGDGPRSRIITGP 766
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS +R ALI IMAQ+GS+VPAS+ L V + + TRMGASD + +GRSTF+ EL+
Sbjct: 767 NMGGKSSCVRMAALIVIMAQIGSYVPASAVTLGVQEAVMTRMGASDDLIKGRSTFMVELS 826
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-D 919
E S IL++ +SLVI+DELGRGTST DG+AIA A L YL++ K LF+THYP +A +
Sbjct: 827 ETSDILKSAAPRSLVILDELGRGTSTFDGMAIASAVLTYLVQDIKTKTLFITHYPLLASE 886
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLP 979
++ +F + H+ ++ K+ G + ++ +LYK+ G + S+G + A+LA +P
Sbjct: 887 LEKQFPTQIANNHMDFIEEDKLDGTV------EINFLYKLTEGSARGSYGIECARLAGIP 940
Query: 980 PSCISRATVIAAKLEAEVSSRVQ 1002
+ + AT+ + ++ V R +
Sbjct: 941 EAVLQSATIRSGEMRKVVEQRTE 963
>gi|425772390|gb|EKV10794.1| DNA mismatch repair protein Msh3 [Penicillium digitatum Pd1]
gi|425773311|gb|EKV11670.1| DNA mismatch repair protein Msh3 [Penicillium digitatum PHI26]
Length = 1132
Score = 534 bits (1375), Expect = e-148, Method: Compositional matrix adjust.
Identities = 326/942 (34%), Positives = 506/942 (53%), Gaps = 89/942 (9%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+QV+E+K + + +L+IEVGYKFRFFGEDA +AAK LGI
Sbjct: 211 KLTPMEKQVIEIKRQNMNTVLVIEVGYKFRFFGEDARIAAKELGIVCIPGKFRFDEHPSE 270
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AH+ F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ L
Sbjct: 271 AHIG-RFASASIPVHRLHVHVKRLVTAGHKVGVVRQIETAALKAAGDNRNAPFVRKLTNL 329
Query: 194 YTKATL----EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
YTK T E + G + Y+ C+ + I G D V +G+VA
Sbjct: 330 YTKGTYIDDAEGLQGPAPAAGGASPATGYMFCMTE------TIAKGPENDE-RVHVGIVA 382
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-- 307
V+ +TGDV+Y +F DGF+RS +E LL ++P E+L+ +S+ +EK++ +G NV
Sbjct: 383 VQPATGDVIYDDFEDGFMRSEIETRLLHIAPCEILIVGEMSRASEKLVQHLSGSKMNVFG 442
Query: 308 ---RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
R+E A + A + V Y + T + + Q + ++ ++++
Sbjct: 443 DAVRLERAQKKKTSAAEAHSHVSGFYAGKMKATSTEEDAQAAKL---------LQNVLDL 493
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
P+ L+ I H+ ++GLE + L F+ S M ++ NTL LE+ +N ++ S
Sbjct: 494 PEQVTICLSAMIEHMTEYGLEHVFDLTKYFQPFSARSHMLMNGNTLVSLEIYQNQTDLST 553
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L ++ T T +G R+LR+WV PL D+ + R +AV E+ + + G
Sbjct: 554 KGSLFWTLDRTQTRFGQRMLRQWVGRPLLDKVRLEERTNAVEELIDPARAVPVERVRG-- 611
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+L V + D+++ + RI++ E + V+QA+
Sbjct: 612 ----------------LLCKVKS------DLEKSLIRIYYGKCERPELLTVLQAMQMIAM 649
Query: 545 QLQQLHIDGEYREKVTSKT-LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+ + K ++T S L+ I AS P + K L +N AA D
Sbjct: 650 EFADI--------KSPAQTGFQSTLVSEAI--ASLPTIRTSVVKFLDKINLHAARTNDKY 699
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL--- 660
+ + E+ + + S + +G +E+ +VSGI +LIE+
Sbjct: 700 TFFREAE-ETEEIGELKLQIGSTEHGFSEHRKQAASTIGRGKVEYSTVSGIEYLIEIENN 758
Query: 661 -PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
PA +VP +W KV+ TK+ R+H+PEV+ + + E L C A+ + L +
Sbjct: 759 SPALKRVPASWVKVSGTKRVSRFHTPEVIQLIRERDQYKEGLAAACDQAYKTLLADIAAQ 818
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
Y F+ +Q+LA LDCL +LA ++ +V+P + E +HI GRHP+++ +L D
Sbjct: 819 YQSFRDCIQSLATLDCLLSLADIALQPGYVKPEYT---EEASLHIEQGRHPMVEQLLTDT 875
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
+VPNDTNL + ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA+SA L +LD ++
Sbjct: 876 YVPNDTNLQHDGTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAASARLGLLDAVF 935
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LD+
Sbjct: 936 TRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDH 995
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
++ + + LF+THY ++ + F ++ H+ + + K D + D ++T+LY+
Sbjct: 996 MVRSIQSLTLFITHYQHLSRMVHSFPDHALRNVHMRFTETDK-----DKEGDGEITFLYE 1050
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
V GV+ S+G VA+LA LP + I A +A+LE + +
Sbjct: 1051 VTEGVAHRSYGLNVARLASLPSAVIDVARQKSAELEESIRRK 1092
>gi|111226571|ref|XP_001134558.1| hypothetical protein DDB_G0281683 [Dictyostelium discoideum AX4]
gi|121962480|sp|Q1ZXH0.1|MSH3_DICDI RecName: Full=DNA mismatch repair protein Msh3; AltName: Full=MutS
protein homolog 3
gi|90970653|gb|EAS66875.1| hypothetical protein DDB_G0281683 [Dictyostelium discoideum AX4]
Length = 1428
Score = 534 bits (1375), Expect = e-148, Method: Compositional matrix adjust.
Identities = 352/981 (35%), Positives = 534/981 (54%), Gaps = 123/981 (12%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLEQQ + +K + PD +LM+E GYK++FFGEDAE+A KVL IY+++ NF+ SIPT
Sbjct: 453 YTPLEQQYIAIKKENPDTVLMVECGYKYKFFGEDAEVANKVLNIYSYVAKNFLNCSIPTQ 512
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
RL H+RRLV AG+KVG+V+QTETAA+KA K+ PF R L+ +YT +T +D+
Sbjct: 513 RLFFHLRRLVMAGYKVGIVEQTETAALKAISSSKSQPFERKLTRVYTSSTF-IDDDI--- 568
Query: 209 EDGCGGES-NYLVCVVD------DDGNVGKIRNGVFGDGFDVR-------LGVVAVEIST 254
+D S +LV + +D + K R+ +G D + VAV + T
Sbjct: 569 DDQLTSSSPQFLVSFYESTPKNKNDDVIKKQRDNE-EEGIDSSNESSTSTISFVAVSVKT 627
Query: 255 GDVVYGEFNDGFLRSGLEAVLLSLSPAELLL---GQPLSKQ----------------TEK 295
G+++Y F D +RS LE +L + P+E+L+ ++KQ T K
Sbjct: 628 GEIIYDTFKDNVMRSQLETILTHIKPSEILIPPTTTTVNKQKVNNGIGTNHYYFSNLTSK 687
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
L Y ++NVR + + +L +++ YE+ E +NN + DV +
Sbjct: 688 CLKTYTK-STNVRTQAMDSQLYDYEYSLGKLIDFYED--ESNNNNNNNNCEDVLK----- 739
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQF-GLERIMCLGASFRSLSGSMEMTLSANTLQQLE 414
++ +N + L + + +L +F I+ + ++F++ S + L +T+ LE
Sbjct: 740 -FVKSTLNKEQII--CLGILLSYLNEFIHFGSILKVESNFKAFRVSNHLVLPHSTIVNLE 796
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGS 474
+L N S+ E G+L+ +MN T T GSR+ W+ PL LI R DAV E+ + +
Sbjct: 797 LLVNESDNKEKGSLIWLMNRTSTFSGSRMFINWICKPLNQLELIKERQDAVEELVNGIKT 856
Query: 475 YRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT-ATPSEFI 533
NS P I+S + + PD+QR ++RI+++ TP EF+
Sbjct: 857 -------------NS------PPIVSIISLFKSHI---PDLQRNLSRIYYKVQCTPKEFL 894
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLIL--------TASSPAVIGKA 585
M ++ + ++++ + +S +S LL + + S IG
Sbjct: 895 NTMTSLQRIVELFKEINNNN------SSYKFNSTLLNSIFKLQNDNKDGDSDSFDYIGGE 948
Query: 586 AKL-------LSTVNKEAADQ-----GDLLNLMIISNGQFSEVARARKAVQSAKEELDSL 633
KL LS +NKE A + D NL + ++ ++ ++ ++ ++E ++
Sbjct: 949 DKLSKRIKYFLSNINKETAKEYGTVGCDKSNLWV-DLEKYEKIRETKEKIEQVEKEFKNV 1007
Query: 634 INMCRKQLGMRNLEF--MSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTA 690
+ RK+L +LE+ M G+ +L+ELP +FK VP +W KVNST+K RYH+PEVL
Sbjct: 1008 LKNIRKELSKPSLEYHHMPGLGLEYLLELPPSFKAVPKSWIKVNSTQKMARYHAPEVLEQ 1067
Query: 691 LDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVR 750
L L+ + E L I + +W SFL EF Y+ F V ++ LDCL +LA +S + ++R
Sbjct: 1068 LKILSQSRETLKIQSQESWISFLGEFSVDYSLFSNFVNKISNLDCLFSLAKVSSLEGYIR 1127
Query: 751 PVFVDDHEPVQIHICSGRHPVLDTILLDN---FVPNDTNLHAEREYCQIITGPNMGGKSC 807
P FV + + I I +GRHPV++ IL + +VPN L IITGPNMGGKS
Sbjct: 1128 PQFVKEKKDGGIQIENGRHPVVEAILSGSDGSYVPNTIELRESACKSMIITGPNMGGKSS 1187
Query: 808 YIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILR 867
+RQ ALI IMAQVG FVPA+S L V D IYTRMGA DSI G+STF EL E S IL+
Sbjct: 1188 LLRQTALIVIMAQVGCFVPATSCSLSVFDAIYTRMGARDSIGTGKSTFFIELEETSDILK 1247
Query: 868 NCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGS 927
N T +LVI+DELGRGTST+DGVAIAY+TL Y++E KC LFVTHYP +A ++ ++
Sbjct: 1248 NSTQNTLVILDELGRGTSTNDGVAIAYSTLKYIVEVMKCYCLFVTHYPLLAQLELQYPTQ 1307
Query: 928 VGTYHVSYLTSHKVMGPMDSKSDQD--------VTYLYKVVPGVSESSFGFKVAQLAQLP 979
VG +H MG ++ K DQ V +LYK+V G +++S+G +A+LA LP
Sbjct: 1308 VGNFH---------MGYLEEKQDQQLQKSVIPKVIFLYKLVKGAAQNSYGLNIARLAGLP 1358
Query: 980 PSCISRATVIAAKLEAEVSSR 1000
I+ A + +++ ++ R
Sbjct: 1359 MEVIADALKKSNEMKESITRR 1379
>gi|85111307|ref|XP_963874.1| hypothetical protein NCU08115 [Neurospora crassa OR74A]
gi|74662732|sp|Q7SD11.1|MSH3_NEUCR RecName: Full=DNA mismatch repair protein msh-3; AltName: Full=MutS
protein homolog 3
gi|28925619|gb|EAA34638.1| hypothetical protein NCU08115 [Neurospora crassa OR74A]
Length = 1145
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 329/978 (33%), Positives = 516/978 (52%), Gaps = 122/978 (12%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D LL++EVGYKFRFFGEDA +AA+ L I AH
Sbjct: 187 TPMELQFLEIKRKHMDTLLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHPSEAH 246
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG+KVGVV+Q ETAA+K G + PF R L+ +YT
Sbjct: 247 LDR-FASASIPVHRLPVHAKRLVAAGYKVGVVRQIETAALKKAGDNRNAPFVRKLTNVYT 305
Query: 196 KATL--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVE 251
K T E E GE YL+C+ + G G D V +G++AV+
Sbjct: 306 KGTYIDETGELDQPGETTGASSGGYLLCLTETPAK---------GMGTDEKVNVGIIAVQ 356
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
+TGD++Y EF DGF+R +E LL +SP E L+ LSK T+K++ +G ++NV
Sbjct: 357 PATGDIIYDEFEDGFMRREIETRLLHISPCEFLIVGDLSKATDKLIQHLSGSSTNV---- 412
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA--IEGIMNMPDLAV 369
G + E + + M ++ SN D + + RSA + ++ +P+ +
Sbjct: 413 ------FGDKSRVERVPKSKTMAAESYSNVTDFYAGKAKDSDERSAALLNKVLKLPEAVM 466
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
L+ I HL ++GL+ I L F+S S M ++ TL+ LEV RN ++ SE G+LL
Sbjct: 467 ICLSAMITHLTEYGLQHIFDLTKYFQSFSTRQHMLINGTTLESLEVYRNATDHSEKGSLL 526
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
++ T T +G RLLR+W+ PL D+ + R+ AV E+ + + + + V
Sbjct: 527 WALDKTHTRFGQRLLRKWIGRPLLDQQRLEERVSAVEELLNNQSTAKVDKLVN------- 579
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
+L S+ D++R + RI++ T E ++ +Q LQ++
Sbjct: 580 -----------MLKSI------KADLERSLIRIYYGKCTRPELLSTLQT-------LQKI 615
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
+ + S LL I+T P++ LS +N EAA + D +
Sbjct: 616 SFEYARVKSPADTGFSSTLLTSAIMTL--PSISPMVTAHLSKINAEAARKDDKYAFFL-E 672
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPAN--FKV 666
+ +++ + + + +++LD + K LG + + +++V+GI +LIE+P +V
Sbjct: 673 QHETEDISEHKLGIAAVEQDLDEHRSEAAKDLGKKVPVNYVTVAGIEYLIEVPNTDLKRV 732
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P +WAK++ TKK R+H+P VL + + E L C A+ L + G Y + A
Sbjct: 733 PASWAKISGTKKVSRFHTPTVLRLIAERDQHKESLASACDQAFSDLLSQIAGEYQPLRDA 792
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVP---- 782
V +L+ LDCL +L+T++ + +P F+ P + I GRHP+ + +L + ++P
Sbjct: 793 VSSLSTLDCLLSLSTVAALPGYTKPTFLPSSHPSFLSITEGRHPIAEHLLPNGYIPFTMS 852
Query: 783 -------------NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
N T+ + Q+ITGPNMGGKS Y R VAL+ ++AQ+GSFVPA+S
Sbjct: 853 LGTLSSSASSPDPNPTSPSGKPALAQLITGPNMGGKSSYTRAVALLVLLAQIGSFVPATS 912
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
L + D I+TRMGA D++ +G STF+ E++E + ILR T +SLV++DELGRGTSTHDG
Sbjct: 913 MSLTLSDAIFTRMGARDNLFKGESTFMVEVSETAAILRQATPRSLVVLDELGRGTSTHDG 972
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG--------TYHVSYLTSHKV 941
AIA A L+Y++ C++LFVTHY +A + T G H+ + S+K
Sbjct: 973 RAIAGAVLEYVVRDVGCLMLFVTHYQDLAGVAEGLTVGEGEEKRRGVECVHMRF-ASNKS 1031
Query: 942 MGPMDSKS-------------------DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSC 982
MD + ++++T+LY + PGV+ S+G VA+LA++P
Sbjct: 1032 RTSMDDDAMEVDGDGDGQEGAGADKDEEEEITFLYDLAPGVAHRSYGLNVARLARIPRKV 1091
Query: 983 ISRATVIAAKLEAEVSSR 1000
+ A +++LE EV ++
Sbjct: 1092 LEVAARKSSELEKEVRAK 1109
>gi|116180884|ref|XP_001220291.1| hypothetical protein CHGG_01070 [Chaetomium globosum CBS 148.51]
gi|121791328|sp|Q2HFD4.1|MSH3_CHAGB RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|88185367|gb|EAQ92835.1| hypothetical protein CHGG_01070 [Chaetomium globosum CBS 148.51]
Length = 1156
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 330/943 (34%), Positives = 509/943 (53%), Gaps = 91/943 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA----------HLDHN 139
TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AAK L I H+D
Sbjct: 229 TPMEIQFLDIKRKHMDTVLVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEPHID-R 287
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+K G + PF R L+ +YTK T
Sbjct: 288 FASASIPVHRLSVHVKRLVAAGHKVGVVRQLETAALKKAGDNRNAPFVRKLTNIYTKGTY 347
Query: 200 --EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVEISTG 255
E E GE YL+C+ + + V G G D V +GV+AV+ +TG
Sbjct: 348 IDETGELDQPGEGAGASAGGYLLCLTE---------SPVKGLGTDENVHIGVMAVQPATG 398
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-----RVE 310
D++Y +F DGF+R +E LL +SP ELL+ LSK T K++ AG ++NV RVE
Sbjct: 399 DIIYDDFEDGFMRREIETRLLHISPCELLVVGELSKATNKLVQHLAGSSTNVFGDRSRVE 458
Query: 311 CASRDCFIGGGALAEVMSLYENM--GEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA 368
+ + A + V Y G+D S S ++ ++ +P+
Sbjct: 459 RVPKSKTMAAEASSHVTQFYAGKVKGDDERSA---------------SLLDKVLKLPESV 503
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
L+ I HL ++GLE I L F+S + M ++ TL+ LEV RN ++ SE G+L
Sbjct: 504 TVCLSAMITHLTEYGLEHIFDLTKYFQSFTTRQHMLINGTTLESLEVYRNATDQSEKGSL 563
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
L ++ T T G RLLR+W+ PL DR + R+ AV E+ E +++
Sbjct: 564 LWALDKTRTRPGRRLLRKWIGRPLLDRERLEERVTAVEELLEHQSNFKVDR--------- 614
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
L VL S+ D++R + RI++ T E ++ +Q LQ+
Sbjct: 615 -------------LGGVLNSI--KADLERSLIRIYYGKCTRPELLSTLQT-------LQR 652
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ I+ + +S+L+ I + P + + L +N EAA + D
Sbjct: 653 ISIEFSRVKTPEDTGFNSSLIVEAIY--ALPGIGTIVSAYLDKINPEAARKDDKYTFFR- 709
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELP-ANFK- 665
+ + ++ + + + + +LD +L + + +++VSGI +LIE+P + K
Sbjct: 710 DDEETEDITNHKLGIAAVEADLDVHRKDAATKLSKKTPVTYVTVSGIEYLIEVPNTDLKH 769
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP +WAK++ TKK R+H+PEV+ +++ E L C A+ LK Y +
Sbjct: 770 VPASWAKISGTKKLSRFHTPEVMRLMNERDQHKEALAAACDNAFTDLLKSIASEYQPLRD 829
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDT 785
AV +LA LDCL +LA ++ + +P F+ P I I SGRHP+ + L D ++P T
Sbjct: 830 AVASLATLDCLLSLAQVASLPGYSKPTFLPTATPPTISITSGRHPIAEHTLPDGYIPFTT 889
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
+L + Q+ITGPNMGGKS Y+R VAL+ ++AQ+GS+VPA + L + D IYTRMGA
Sbjct: 890 SLASPSPLAQLITGPNMGGKSSYVRAVALLVLLAQIGSYVPAEAMSLTLTDAIYTRMGAR 949
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D++ G STF+ E++E + ILR TA+SLV++DELGRGTSTHDG AIA+A L ++ +
Sbjct: 950 DNLFAGESTFMVEVSETAAILRGATARSLVVLDELGRGTSTHDGAAIAHAVLAHVARETR 1009
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK--------VMGPMDSKSDQDVTYLY 957
C+ LF+THY +A + G+V H+ + + + + +D+++T+LY
Sbjct: 1010 CLTLFITHYQNLARVADGLGGAVRCVHMRFEATGRQRDEAADGDADAAAADADEEITFLY 1069
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+V GV+ S+G VA+LA++P + A + ++E V +R
Sbjct: 1070 EVADGVAHRSYGLNVARLARIPRRVLDVAARKSREMEEGVKAR 1112
>gi|58264676|ref|XP_569494.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
gi|338818295|sp|P0CO92.1|MSH3_CRYNJ RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|57225726|gb|AAW42187.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1191
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 341/975 (34%), Positives = 532/975 (54%), Gaps = 115/975 (11%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q +E+K + DVLL++EVGYK++F GEDA+ A++ LGI A + NF TASIPT
Sbjct: 239 YTPLEKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGIVAFPNRNFFTASIPTH 298
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED---- 204
RL++HV++L++ G+KVGV+ QTETAA+K G + PF R L+ L+T AT ED
Sbjct: 299 RLHIHVKKLLSLGYKVGVITQTETAALKKIGDNRNAPFARKLTHLFTAATY--VEDPSLS 356
Query: 205 --------VGGGEDGCGGE----SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
V + G +N LV +V+ V + + V++G+V V
Sbjct: 357 SSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQP--VDRASDD------RVKVGLVCVVP 408
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPASN----- 306
TGD+ + EF+D +R+ LE L LSPAELLL Q LSK TEK+L +AG +
Sbjct: 409 GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLSKATEKVLTYFAGEPKHRGRNA 468
Query: 307 VRVE--------------------CASRDCFIGGGALAE----------VMSLYENMGED 336
VR+E C + G + + SL + +D
Sbjct: 469 VRIERIDNIPEYDAAFDFLTNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLSQD 528
Query: 337 TLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRS 396
+ D+ + + + AI +++ P V ++A+ IR++K+FGLE +SF
Sbjct: 529 GADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKHTSSFVR 588
Query: 397 LSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRN 456
+ M LS+NTL LE+ +N ++G YG+L+ +++H T G RLLR WV PL D
Sbjct: 589 FANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLREWVGRPLLDVA 648
Query: 457 LISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQ 516
+ AR DA+ EI E+ SY H EK L S+L ++ PD+
Sbjct: 649 ALKARADAIEEIMEN-NSY--------HMEK--------------LRSLLINM---PDLV 682
Query: 517 RGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTA 576
RG+TR+ + ATP+E ++ ++ + E++ + S LL + T
Sbjct: 683 RGLTRVQYGKATPNELATLLITLV---------RLASEFKPNM-GNVFRSCLLNNIPNTL 732
Query: 577 SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
P ++ + + L+ +N + A + D+ NL + +F ++ + + + EL+ +
Sbjct: 733 --PTILDTSQRFLNALNLKQARENDVANLWADPD-RFPDIQDVKDCISVCEMELNEHLME 789
Query: 637 CRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
RK L L +++VSGI +L+E+P VP W K+++T+ RYH+P++L +
Sbjct: 790 LRKILKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKER 849
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
E+L+IV R A+ +F E Y+ E + +A +DCL +LA + + +P FV
Sbjct: 850 TQHLEKLSIVAREAFIAFQSEVAEYH-ELVVVSKQIAVIDCLMSLAQTAAASGYCKPKFV 908
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
+ E + I +GRHP+++ + +++VP D + E +IITGPNM GKS +R +AL
Sbjct: 909 AEPE---LKILAGRHPMVEMLREESYVPFDIHFSKEEGTTKIITGPNMAGKSSTVRAMAL 965
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
I MAQ+GSFVPA+S L V D + TRMGASD I +G+STF+ EL+E S IL+ T +SL
Sbjct: 966 IVCMAQIGSFVPAASVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDILQTITPRSL 1025
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHV 933
V++DELGRGTST+DG+AIAYATL ++ E C LFVTHYP +A D+ + + +H+
Sbjct: 1026 VVLDELGRGTSTYDGIAIAYATLSHIAE-IGCNTLFVTHYPTVAQDLAREKPDKISNWHM 1084
Query: 934 SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
S+ ++ P ++T+LY++ G+ E+SFG A+LA LP + A + ++ L
Sbjct: 1085 SF---DEIQMP---DGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDTAQMRSSSL 1138
Query: 994 EAEVSSRVQNRSAKR 1008
+AE R++ A+R
Sbjct: 1139 KAETQERLRGIVARR 1153
>gi|402080962|gb|EJT76107.1| DNA mismatch repair protein MSH3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1148
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 332/950 (34%), Positives = 522/950 (54%), Gaps = 96/950 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AAK L I AH
Sbjct: 222 TPMEMQFLDIKRKHMDTVLIVEVGYKFRFFGEDARIAAKELSIVCVSGKFRYDEHSSEAH 281
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ +YT
Sbjct: 282 LD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQVETAALKKAGDNRNAPFVRKLTNVYT 340
Query: 196 KATL------EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGV 247
K T E A G GG YL+C+ + + G G D V +G+
Sbjct: 341 KGTYIDDDLGEPAPTTEGSGAPAGG---YLLCITE---------SAAKGAGTDEKVDVGL 388
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
+AV+ +TGD++Y F DGF+R+ LE LL +SP ELL+ LS+ TEK++ +G ASNV
Sbjct: 389 IAVQPATGDIIYDSFEDGFMRNELETRLLHISPCELLIVGDLSRATEKLVRHLSGSASNV 448
Query: 308 -----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
RVE ++ + A + V Y G+ ++++++ +++ + ++
Sbjct: 449 FGDRTRVERVAKGKTMAAEASSHVTQFY--AGKLKGNSHDERAVEL---------LNKVL 497
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
+P+ L+ I HL +FGLE I L F+S S M ++ TL+ LEV RN ++
Sbjct: 498 GLPEPVTLCLSAMITHLTEFGLEHIFDLTKYFQSFSTRSHMLINGTTLESLEVYRNQTDH 557
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
SE G+L ++ T T +G R+LR+W+ PL D+ + R+ AV E+ E +
Sbjct: 558 SEKGSLFWALDKTKTRFGQRMLRKWLGRPLLDKGRLDDRVAAVEELFEKRAT-------- 609
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
H +K +++S+ T D++R + RI++ T SE +AV+Q
Sbjct: 610 AHADK----------LQRLVASIKT------DLERSLIRIYYGRCTRSELLAVLQT---- 649
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA---DQ 599
LQ++ ++ ++ + S L+ I S PA+ + L+ +N EAA D+
Sbjct: 650 ---LQRIAVEYARVKEPSETGFESQLVTDAI--CSLPAIRDTVVEYLNRINPEAARNNDK 704
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLI 658
D +G+ ++++ + ++ S +++LD+ LG + +++++V+GI +LI
Sbjct: 705 YDFFRDDTGEDGEDNDISNHKLSIASVEQDLDAHRADAAVTLGRKKAVDYVTVAGIEYLI 764
Query: 659 ELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF 716
E+P +VP +WAK++ TKK R+H+P+V+ + + E L C AA+ + L
Sbjct: 765 EVPNTDLRRVPASWAKISGTKKLSRFHTPDVVRLVAERDQHKEALAAACDAAFKAMLASI 824
Query: 717 GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL 776
Y + AV +LA LDCL LA ++ + +P + P I I GRHP+ + L
Sbjct: 825 ADEYQPLRDAVASLATLDCLLCLAQVAALPGYSKPTILPSSHPPTISITEGRHPIAEHTL 884
Query: 777 LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
++P T L A ++TGPNMGGKS ++R +AL+ ++AQVGS+VPA++A L + D
Sbjct: 885 PGGYIPFTTTLAAPAPLAHLVTGPNMGGKSSFVRALALVVLLAQVGSYVPATAASLTLSD 944
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
IYTRMGASD++ G STF+ E+ E + ILR T +SLV++DELGRGTSTHDG AIA+A
Sbjct: 945 AIYTRMGASDNLFAGESTFMVEVGETAAILRAATPRSLVLLDELGRGTSTHDGAAIAHAV 1004
Query: 897 LDYLLEHKKCMVLFVTHYPKIADIKTKFTGS-VGTYHVSYLTSHKVMGPMDSKS-----D 950
LD+++ +C+ LF+THY +A + V H+ + +S D+ D
Sbjct: 1005 LDHVVRETRCLTLFITHYQSLARVAEGLGRDLVRNVHMRFTSSRAEKAGGDTADAEDDVD 1064
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+++T+LY+V GV+ S+G VA+LA++P + A + +E EV R
Sbjct: 1065 EEITFLYEVTDGVAHRSYGLNVARLARIPRKILDVAARKSRHMEDEVKMR 1114
>gi|134109935|ref|XP_776353.1| hypothetical protein CNBC5700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818294|sp|P0CO93.1|MSH3_CRYNB RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|50259027|gb|EAL21706.1| hypothetical protein CNBC5700 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1191
Score = 527 bits (1358), Expect = e-146, Method: Compositional matrix adjust.
Identities = 340/975 (34%), Positives = 532/975 (54%), Gaps = 115/975 (11%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q +E+K + DVLL++EVGYK++F GEDA+ A++ LGI A + NF TASIPT
Sbjct: 239 YTPLEKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGIVAFPNRNFFTASIPTH 298
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED---- 204
RL++HV++L++ G+KVGV+ QTETAA+K G + PF R L+ L+T AT ED
Sbjct: 299 RLHIHVKKLLSLGYKVGVITQTETAALKKIGDNRNAPFARKLTHLFTAATY--VEDPSLS 356
Query: 205 --------VGGGEDGCGGE----SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
V + G +N LV +V+ V + + V++G+V V
Sbjct: 357 SSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQP--VDRASDD------RVKVGLVCVVP 408
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPASN----- 306
TGD+ + EF+D +R+ LE L LSPAELLL Q L+K TEK+L +AG +
Sbjct: 409 GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLTKATEKVLTYFAGEPKHRGRNA 468
Query: 307 VRVE--------------------CASRDCFIGGGALAE----------VMSLYENMGED 336
VR+E C + G + + SL + +D
Sbjct: 469 VRIERIDNIPEYDAAFDFLTNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLSQD 528
Query: 337 TLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRS 396
+ D+ + + + AI +++ P V ++A+ IR++K+FGLE +SF
Sbjct: 529 GADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKHTSSFVR 588
Query: 397 LSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRN 456
+ M LS+NTL LE+ +N ++G YG+L+ +++H T G RLLR WV PL D
Sbjct: 589 FANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLREWVGRPLLDVA 648
Query: 457 LISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQ 516
+ AR DA+ EI E+ SY H EK L S+L ++ PD+
Sbjct: 649 ALKARADAIEEIMEN-NSY--------HMEK--------------LRSLLINM---PDLV 682
Query: 517 RGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTA 576
RG+TR+ + ATP+E ++ ++ + E++ + S LL + T
Sbjct: 683 RGLTRVQYGKATPNELATLLITLV---------RLASEFKPNM-GNVFRSCLLNNIPNTL 732
Query: 577 SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
P ++ + + L+ +N + A + D+ NL + +F ++ + + + EL+ +
Sbjct: 733 --PTILDTSQRFLNALNLKQARENDVANLWADPD-RFPDIQDVKDCISVCEMELNEHLME 789
Query: 637 CRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
RK L L +++VSGI +L+E+P VP W K+++T+ RYH+P++L +
Sbjct: 790 LRKILKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKER 849
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
E+L+IV R A+ +F E Y+ E + +A +DCL +LA + + +P FV
Sbjct: 850 TQHLEKLSIVAREAFIAFQSEVAEYH-ELVVVSKQIAVIDCLMSLAQTAAASGYCKPKFV 908
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
+ E + I +GRHP+++ + +++VP D + E +IITGPNM GKS +R +AL
Sbjct: 909 AEPE---LKILAGRHPMVEMLREESYVPFDIHFSKEEGTTKIITGPNMAGKSSTVRAMAL 965
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
I MAQ+GSFVPA+S L V D + TRMGASD I +G+STF+ EL+E S IL+ T +SL
Sbjct: 966 IVCMAQIGSFVPAASVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDILQTITPRSL 1025
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHV 933
V++DELGRGTST+DG+AIAYATL ++ E C LFVTHYP +A D+ + + +H+
Sbjct: 1026 VVLDELGRGTSTYDGIAIAYATLSHIAE-IGCNTLFVTHYPTVAQDLAREKPDKISNWHM 1084
Query: 934 SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
S+ ++ P ++T+LY++ G+ E+SFG A+LA LP + A + ++ L
Sbjct: 1085 SF---DEIQMP---DGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDTAQMRSSSL 1138
Query: 994 EAEVSSRVQNRSAKR 1008
+AE R++ A+R
Sbjct: 1139 KAETQERLRGIVARR 1153
>gi|367044184|ref|XP_003652472.1| hypothetical protein THITE_2114009 [Thielavia terrestris NRRL 8126]
gi|346999734|gb|AEO66136.1| hypothetical protein THITE_2114009 [Thielavia terrestris NRRL 8126]
Length = 1171
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 338/969 (34%), Positives = 520/969 (53%), Gaps = 115/969 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 211 KLTPMEIQFLDIKRKHMDTILVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEHPSE 270
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHLD F +ASIP RLNVHV+RLV AG KVGVV+Q ETAA+K G + PF R L+ +
Sbjct: 271 AHLD-RFASASIPVHRLNVHVKRLVAAGHKVGVVRQLETAALKKAGDNRNAPFVRKLTNV 329
Query: 194 YTKATL--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVA 249
YTK T E E E YL+C+ + + G G D V +G++A
Sbjct: 330 YTKGTYIDETGELDQPAEAAGAPAGGYLLCLTE---------SAAKGSGTDEKVDVGIIA 380
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-- 307
V+ +TGD+++ +F DGF+R +E LL +SP ELL+ LSK T+K++ AG ++NV
Sbjct: 381 VQPATGDIIFDDFEDGFMRREIETRLLHISPCELLIVGELSKATDKLVQHLAGSSTNVFG 440
Query: 308 ---RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA--IEGIM 362
RVE + + A + V Y +D N+E RSA ++ ++
Sbjct: 441 DRTRVERVPKSKTMAAEASSHVTQFYAGKTKD---NDE------------RSAALLDKVL 485
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
+P+ L+ I HL ++GLE I L F+S S M ++ TL+ LEV RN ++
Sbjct: 486 KLPEAVTICLSAMITHLTEYGLEHIFDLTKYFQSFSTRQHMLINGTTLESLEVYRNATDQ 545
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
SE G+LL ++ T T G RLLR+W+ PL D+ + R+ AV E+ E + + + VG
Sbjct: 546 SEKGSLLWALDKTQTRPGRRLLRKWIGRPLLDQEQLEERVSAVEELLEHQSTAKVDKLVG 605
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
+LSS+ D++R + RI++ T SE ++ +Q
Sbjct: 606 ------------------VLSSI------KADLERSLIRIYYGKCTRSELLSTLQT---- 637
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
LQ++ ++ + S L+ I + VI + L +N +AA + D
Sbjct: 638 ---LQRIAVEFSRVKTPADTGFKSRLISEAICSLPGIGVIVNS--YLDKINAQAARKDDK 692
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELP 661
+ + ++ + + + + +LD+ +L + + +++V+GI +LIE+P
Sbjct: 693 YAFFR-DDEETEDITNHKLGIAAVEADLDAHRKDAAAKLSKKTPVNYVTVAGIEYLIEVP 751
Query: 662 -ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
+ K VP +WAK++ TKK R+H+PEV+ +++ E L C AA+ LK+
Sbjct: 752 NTDLKHVPASWAKISGTKKLSRFHTPEVMRLMNERDQHREALAAACDAAFADLLKDIASE 811
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
Y + AV +LA LDCL +LA ++ + +P F+ P I I GRHP+ + L +
Sbjct: 812 YQPLRDAVASLATLDCLLSLAQVAALPGYSKPTFLPSTAPPTISITDGRHPIAEHTLPNG 871
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
++P T+L + Q+ITGPNMGGKS Y+R VAL+ ++AQ+GSFVPAS+ L + D IY
Sbjct: 872 YIPFTTSLTSPAPIAQLITGPNMGGKSSYVRAVALLVLLAQIGSFVPASAMSLTLADAIY 931
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TRMGA D++ G STF+ E++E + ILR T +SLVI+DELGRGTSTHDG AIA+A LD+
Sbjct: 932 TRMGARDNLFAGESTFMVEVSETAAILRGATPRSLVILDELGRGTSTHDGAAIAHAVLDH 991
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGS-VGTYHVSY----------------LTSHKVM 942
++ +C+ LF+THY +A + G V H+ + H+ +
Sbjct: 992 VVRETRCLTLFITHYQSLARVADGLGGGRVRCVHMRFEARAPQQQHRQNQHQNQNHHQQL 1051
Query: 943 GPMDSK-----------SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAA 991
P D + +D+++T+LY+V GV+ S+G VA+LA+LP + A +
Sbjct: 1052 PPADGEDAKDDEPSPDPADEEITFLYEVADGVAHRSYGLNVARLARLPRRVLDVAARKSR 1111
Query: 992 KLEAEVSSR 1000
++E V +R
Sbjct: 1112 EMEEAVKAR 1120
>gi|171687199|ref|XP_001908540.1| hypothetical protein [Podospora anserina S mat+]
gi|170943561|emb|CAP69213.1| unnamed protein product [Podospora anserina S mat+]
Length = 1118
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 331/936 (35%), Positives = 510/936 (54%), Gaps = 87/936 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA----------HLDHN 139
TP+E Q +++K K+ D LL++EVGYKF+FFGEDA +AAK L I HLD
Sbjct: 213 TPMEIQFLDIKRKHMDTLLIVEVGYKFKFFGEDARIAAKELSIVCIPGKFRYDEPHLDR- 271
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
F +AS+P RLNVH +RLV AG KVGVV+Q ETAA+K G + PF R L+ +YTK T
Sbjct: 272 FASASVPVHRLNVHAKRLVAAGHKVGVVRQVETAALKKAGDNRNAPFVRKLTNVYTKGTY 331
Query: 200 --EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVEISTG 255
E E G+ YL+C+ + + G G D V++G++AV+ +TG
Sbjct: 332 IDETGELDQPGDTTGAPSGGYLLCLTE---------SPTKGSGTDEKVQVGIIAVQPATG 382
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-----RVE 310
D++Y +F DGF+R +E LL +SP E L+ LSK ++K++ +G +NV RVE
Sbjct: 383 DIIYDDFEDGFMRREMETRLLHISPCEFLIVGDLSKASDKIVKHLSGSRTNVFGDRSRVE 442
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+ + A + V Y + ED N + +E ++ +P+
Sbjct: 443 RVPKSKTMAAEAHSHVTQFYAD------KTKEDDE-------NSAALLEKVLKLPESVTI 489
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L+ I HL ++GL+ I L F+S S M ++ TL+ LEV RN+++ SE G+L+
Sbjct: 490 CLSAMINHLTEYGLQHIFGLTKYFQSFSTRQHMLVNGTTLESLEVYRNSTDHSEKGSLMW 549
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
++ T T G RLLR+W+ PL D+ + R+ AV E+ E + + S+ G
Sbjct: 550 ALDKTQTRPGQRLLRKWIGRPLLDQQRLEERVTAVEELLEKQSAIQVSKLTG-------- 601
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
+L+S+ D++R + RI++ T E ++ +Q LQ++
Sbjct: 602 ----------MLASI------KADLERSLIRIYYGKCTRPELLSTLQT-------LQKIA 638
Query: 551 IDGEYREKVTSKT-LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
++ +R K ++T S+LL+ +L S PA+ L +N +AA + D N
Sbjct: 639 ME-YHRVKSPAETGFKSSLLQETLL--SLPAIGDIVTSYLDKINAQAARKDDKYNFFR-E 694
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL-EFMSVSGITHLIELPANF---K 665
+ ++ + + + + +LD+ +L + L E+ +VSGI +LIE+ AN
Sbjct: 695 EEETDDITDHKLGIAAVEADLDAYRKEATAKLKKKVLVEYTTVSGIEYLIEV-ANTDLKN 753
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP +WAK + TKK R+H+PEV+ + + E L C AA+ + L Y +
Sbjct: 754 VPASWAKTSGTKKVSRFHTPEVIKLISERDQHREALAAACDAAFSALLSSLAAEYQPLRD 813
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDT 785
AV +LA LDCL +L+ ++ + +P F+ P I I GRHP+ + L ++P T
Sbjct: 814 AVSSLATLDCLLSLSQVASLPGYSKPNFLPITAPPSISIVEGRHPIAEHTLSTPYIPFTT 873
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
+L + Q+ITGPNMGGKS Y+R VAL+ ++AQVGS+VPA+ L D I+TRMGA
Sbjct: 874 SLSSPAPLAQLITGPNMGGKSSYVRSVALLVLLAQVGSYVPATEMTLTPCDAIFTRMGAR 933
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D++ G STF+ E++E + ILR+ T +SLVI+DELGRGTSTHDG AIA+A LDY+++
Sbjct: 934 DNLFAGESTFMVEVSETASILRSATPRSLVILDELGRGTSTHDGAAIAHAVLDYVVKEVG 993
Query: 906 CMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
C+ LF+THY +A + G V H+ + G +++VT+LY+V GV+
Sbjct: 994 CLTLFITHYQNLARVAEGLGDGRVRCVHMKFRVER---GGDGDGQEEEVTFLYEVAEGVA 1050
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G V +LA+LP + A V + ++E EV R
Sbjct: 1051 HRSYGLNVGRLARLPKQVLEVAGVKSREMEEEVKER 1086
>gi|358377989|gb|EHK15672.1| hypothetical protein TRIVIDRAFT_56280 [Trichoderma virens Gv29-8]
Length = 1095
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 319/936 (34%), Positives = 495/936 (52%), Gaps = 85/936 (9%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AAK LGI
Sbjct: 192 KLTPMELQFLDIKRKHLDTILIVEVGYKFRFFGEDARVAAKELGIVCIPGKMRYDEHPSE 251
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
AHLD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ L
Sbjct: 252 AHLD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNAPFVRKLTNL 310
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVE 251
YTK T +D YL+C+ + G G D V +GV+AV+
Sbjct: 311 YTKGTYIDENGELDSQDSSTPSGGYLLCITE---------TATKGSGTDENVNVGVLAVQ 361
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV---- 307
+TGD++Y F DGF+RS +E LL +SP E L+ L+K T+K++ +G ++NV
Sbjct: 362 PATGDIIYDTFEDGFMRSEIETRLLHISPCEFLIVGDLTKGTDKLIQHLSGSSTNVFGDR 421
Query: 308 -RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
RVE + + A + V Y + ++ S+NE + + ++ ++ +P+
Sbjct: 422 SRVERVPKSKTMAAEAYSHVTQFYADQVKEA-SDNETAS----------ALLDKVLKLPE 470
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
L+ I HL+++GLE I L F+S S M ++ TL+ LEV RN+++ S+ G
Sbjct: 471 AITICLSAMITHLQEYGLEHIFGLTKYFQSFSTRSHMLINGTTLESLEVYRNSTDHSQKG 530
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L ++ TLT +G RLLR+WV PL DR + RL AV E+ + + +
Sbjct: 531 SLFWAVDKTLTRFGQRLLRKWVGRPLLDRERLDERLAAVQELLDKQSTSPVDD------- 583
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
L +LT+ D++R + RI++ T E ++V+Q L
Sbjct: 584 ---------------LERLLTTT--KADLERSLIRIYYGKCTRPELLSVLQT-------L 619
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
Q++ + + S L+ I T P ++ L +N AA + D
Sbjct: 620 QKIASHYSSVKSASDVGFDSPLIVNAITTL--PQILDSVISYLDRINLYAAKKDDKYGFF 677
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK 665
E+ + + + ELD + ++ + +E+++V+GI +LI +P + K
Sbjct: 678 R-EEFHTEEIQDHQLGIAHVEHELDEHRAVAAGKIKQKTVEYVTVAGIEYLIAVPNKDIK 736
Query: 666 -VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP +W+K++ TK R+H+PEV+ +++ E L C A+ FL Y +
Sbjct: 737 NVPASWSKISGTKALSRFHTPEVIRLINERDQHREALAAACDKAFKDFLATIASEYQPLR 796
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
A+ ALA LDCL +L+ ++ + +P F+ I I GRHP+ + L +++P
Sbjct: 797 DAISALATLDCLLSLSKVAAQPGYSKPTFLPSTSEPSISISQGRHPIAEQTLEGSYIPFT 856
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T L +ITGPNMGGKS ++R VALI +++Q+GSFVPA S L + D I+TR GA
Sbjct: 857 TTLSHPSALAHLITGPNMGGKSSFVRAVALIVLLSQIGSFVPADSLTLTLCDAIHTRAGA 916
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
D++ G STF+ E++E + ILR+ T +SLVI+DELGRGTSTHDG AIA + L Y++
Sbjct: 917 RDNLFAGESTFMVEVSETARILRSATPRSLVILDELGRGTSTHDGAAIAQSVLHYVVTET 976
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
+C+ LF+THY +A + G V H+ K ++++T+LY+V G++
Sbjct: 977 RCLTLFITHYQNLARVADGLLG-VTNVHM------KFNAQTGDDGEEEITFLYEVGEGIA 1029
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA++P + A + +LE E+ R
Sbjct: 1030 HRSYGLNVARLARIPKKVLDVAADKSKELENEMRRR 1065
>gi|321253333|ref|XP_003192701.1| hypothetical protein CGB_C2370C [Cryptococcus gattii WM276]
gi|317459170|gb|ADV20914.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1189
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 341/972 (35%), Positives = 527/972 (54%), Gaps = 112/972 (11%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q +++K + DVLL++EVGYK++F GEDA+ A++ LGI A NF TASIPT
Sbjct: 240 YTPLEKQFMDIKEQNKDVLLLMEVGYKYKFHGEDAKTASRELGIVAFPSRNFFTASIPTH 299
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT------LEAA 202
RL++HV++L++ G+KVGV+ QTETAA+K G + PF R L+ L+T AT L ++
Sbjct: 300 RLHIHVKKLLSLGYKVGVITQTETAALKKIGDNRNAPFTRKLTHLFTAATYVEDPSLSSS 359
Query: 203 EDVGGGEDGCGGES----NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ + G + N LV +V+ + V++G+V V TGD+
Sbjct: 360 SPIRFDDPVIPGTTPPPTNALVAIVEQHADEASDDR--------VKVGLVCVVPGTGDIT 411
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKML------LAYAGPASNVRVEC 311
+ EF D +R+ LE L LSPAELLL Q LSK TEK+L + Y G ++ VR+E
Sbjct: 412 WDEFEDSKIRTELETRLAHLSPAELLLPKQKLSKVTEKVLTYFTDEVKYRG-SNAVRIER 470
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV-PEQGNHR--------------- 355
D A + + Y + +++ D+N + P G +
Sbjct: 471 ID-DIPEYDAAFDFLTNFYHDKEHRNITSKGDENDERHPMTGGNEQWSLQRKLRQGGANT 529
Query: 356 -----------------SAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLS 398
AI +++ P V ++A+ IR++K+FGLE +SF +
Sbjct: 530 SLEMDEKIYLASGVSSGKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFRHTSSFVRFA 589
Query: 399 GSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLI 458
M LS+NTL LE+ +N ++G YG+L+ +++H T G RLLR WV PL D +
Sbjct: 590 NRSHMLLSSNTLTNLEIYQNQTDGGLYGSLMWLLDHCKTRMGKRLLREWVGRPLLDVTAL 649
Query: 459 SARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRG 518
AR DA+ EI E+ SY H EK L S+L ++ PD+ RG
Sbjct: 650 KARADAIEEIMEN-NSY--------HMEK--------------LRSLLLNM---PDLVRG 683
Query: 519 ITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASS 578
+TR+ + ATP+E ++ ++ + E++ T S LL + T
Sbjct: 684 LTRVQYGKATPNELATLLITLV---------RLASEFKPN-TGNVFRSCLLNNIPNTL-- 731
Query: 579 PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCR 638
P V+ + + L+ +N + A + D NL G+F E+ + + + EL+ + R
Sbjct: 732 PTVLNTSQRFLNALNLKQARENDEANLWA-DPGKFPEIQDVKDCICVCEIELNEHLMEVR 790
Query: 639 KQLGMRNLEFMSVSGITHLIELPA-NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
K L L++++VSGI +L+E+P + VP W K+++T+ RYH+P++L + +
Sbjct: 791 KILKKPTLKYITVSGIEYLVEVPIRDTIVPAQWVKISATRTVNRYHTPKILAIMKERTQH 850
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
E+L++V A+ +F E Y+ + + +A +DCL +LA + + +P F +
Sbjct: 851 QEKLSLVAHEAFTAFQSEVAEYH-DLVVVSKQIAVIDCLMSLAQTAAASGYCKPKFAVEP 909
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
E + I +GRHP+++ + + +VP D + E +IITGPNM GKS +R +ALI
Sbjct: 910 E---LKIVAGRHPMVEMLREEAYVPFDIHFSKEEGTTKIITGPNMAGKSSTVRAMALIVC 966
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MAQ+GSFVPA+S L V D + TRMGASD I +G+STF+ EL+E S ILR T +SLVI+
Sbjct: 967 MAQIGSFVPATSVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDILRTITPRSLVIL 1026
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHVSYL 936
DELGRGTST+DG AIAYATL ++ E C LFVTHYP IA D+ + + +H+S+
Sbjct: 1027 DELGRGTSTYDGAAIAYATLSHIAE-IGCNTLFVTHYPMIAQDLAREKPDKISNWHMSF- 1084
Query: 937 TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
++ P S ++T+LY++ G+ E+SFG A+LA LP + A + + L+ E
Sbjct: 1085 --DEIKMPDGSA---EITFLYQLTRGLQEASFGVWCARLAGLPKPILDNAQMRSNSLKTE 1139
Query: 997 VSSRVQNRSAKR 1008
R++ A+R
Sbjct: 1140 TQERLRGIVARR 1151
>gi|336265402|ref|XP_003347472.1| MSH3 protein [Sordaria macrospora k-hell]
gi|380087954|emb|CCC05172.1| putative MSH3 protein [Sordaria macrospora k-hell]
Length = 1157
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 333/991 (33%), Positives = 523/991 (52%), Gaps = 137/991 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D LL++EVGYKFRFFGEDA +AA+ L I AH
Sbjct: 196 TPMELQFLEIKRKHMDTLLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHPSEAH 255
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VHV+RLV AG KVGVV+Q ETAA+K G + PF R L+ +YT
Sbjct: 256 LD-RFASASIPVHRLPVHVKRLVAAGHKVGVVRQIETAALKKAGDNRNAPFVRKLTNVYT 314
Query: 196 KATL--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVE 251
K T E E GE YL+C+ + G G D V +G++AV+
Sbjct: 315 KGTYIDETGELDQPGETTGASSGGYLLCLTETPAK---------GMGTDEKVNVGIIAVQ 365
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV---- 307
+TGD++Y EF DGF+R +E LL +SP E L+ LSK T+K++ +G ++NV
Sbjct: 366 PATGDIIYDEFEDGFMRREIETRLLHISPCEFLIVGDLSKATDKLIQHLSGSSTNVFGDK 425
Query: 308 -RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA--IEGIMNM 364
RVE + + A + V Y +D+ + RSA ++ ++ +
Sbjct: 426 SRVERIPKSKTMAAEAYSHVTDFYAGKAKDS---------------DERSAALLDKVLKL 470
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
P+ + L+ I HL ++GL+ I L F+S S M ++ TL+ LEV RN ++ SE
Sbjct: 471 PEAVIICLSAMIIHLTEYGLQHIFGLTKYFQSFSTRQHMLINGTTLESLEVYRNATDHSE 530
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+LL ++ T T +G RLLR+W+ PL D+ + R+ AV E+ + + + + VG
Sbjct: 531 KGSLLWALDKTHTRFGQRLLRKWIGRPLLDQQRLEERVSAVEELLNNQSTAKVDKLVG-- 588
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+L S+ D++R + RI++ T E ++ +Q
Sbjct: 589 ----------------MLKSI------KADLERSLIRIYYGKCTRPELLSTLQT------ 620
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
LQ++ ++ + S LL I+T S + I A LS +N EAA + D
Sbjct: 621 -LQKISLEYARVISPSDTGFASPLLTSAIMTLPSISPIVTAH--LSKINAEAARKDDKYA 677
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPAN 663
+ + ++ + + + +++LD + K+LG + + +++V+GI +LIE+ AN
Sbjct: 678 FFL-EQHETDAISEHKLGIAAVEQDLDEHRSEAAKELGKKVPVNYVTVAGIEYLIEV-AN 735
Query: 664 F---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+VP +WAK++ TKK R+H+P VL + + E L C A+ L + G Y
Sbjct: 736 TDLKRVPASWAKISGTKKVSRFHTPTVLRLIAERDQHKESLASACDQAFADLLAQIAGEY 795
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
+ AV +L+ LDCL +L+T++ + + +P F+ P + I GRHP+ + +L + +
Sbjct: 796 QPLRDAVSSLSTLDCLLSLSTVAASPGYSKPTFLPSSHPSFLSITEGRHPIAEHLLPNGY 855
Query: 781 VPNDTNL-----------HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
+P +L + Q+ITGPNMGGKS Y+R VAL+ ++AQ+GSFVPA+
Sbjct: 856 IPFTMSLGTPSSSSSSSSGSISAQAQLITGPNMGGKSSYVRAVALLVLLAQIGSFVPATC 915
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
L + D I+TRMGA D++ +G STF+ E++E + ILR T +SLV++DELGRGTSTHDG
Sbjct: 916 MTLTLSDAIFTRMGARDNLFKGESTFMVEVSETASILRQATPRSLVVLDELGRGTSTHDG 975
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIA----------DIKTKFTGSVGTYHVSYLTSH 939
AIA A L+Y+ C++LF+THY +A +++ K +V H+ + ++
Sbjct: 976 AAIAGAVLEYVARDVGCLMLFITHYQDLARVAEGIVLDEEVQGKKIRAVDCVHMRFASNK 1035
Query: 940 KVMGP-----------MD------------SKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
G M+ + D+++T+LY + PGV+ S+G VA+LA
Sbjct: 1036 GPKGEEADDDDDGGDIMEVDGAEGEGDGDRADEDEEITFLYDLAPGVAHRSYGLNVARLA 1095
Query: 977 QLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
++P + +AAK E+ V+ R K
Sbjct: 1096 RIPRKVLE----VAAKKSRELEEVVRARRVK 1122
>gi|358391487|gb|EHK40891.1| hypothetical protein TRIATDRAFT_78319 [Trichoderma atroviride IMI
206040]
Length = 1099
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 316/934 (33%), Positives = 498/934 (53%), Gaps = 85/934 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D +L++EVGYKFRFFGEDA +AAK L I AH
Sbjct: 198 TPMELQFLEIKRKHMDTILIVEVGYKFRFFGEDARVAAKELSIVCIPGKMRYDEHPSEAH 257
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ +YT
Sbjct: 258 LD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQLETAALKKAGDNRNAPFVRKLTNVYT 316
Query: 196 KATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVEIS 253
K T +D YL+C+ + G G D V +G++AV+ +
Sbjct: 317 KGTYIDENGELDSQDASAPSGGYLLCITE---------TATKGSGADENVNVGILAVQPA 367
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-----R 308
TGD++Y F DGF+RS +E LL +SP E ++ L+K T+K++L +G ++NV R
Sbjct: 368 TGDIIYDTFEDGFMRSEIETRLLHISPCEFVIVGDLTKGTDKLILHLSGSSTNVFGDRSR 427
Query: 309 VECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA 368
VE + + A + V Y + ++ S+NE + + ++ ++ +P+
Sbjct: 428 VERVPKSKTMAAEAYSHVTQFYADKVKEA-SDNETAS----------ALLDKVLKLPEAV 476
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
L+ I HL+++GLE I L F+S S M ++ TL+ LE+ RN+++ S G+L
Sbjct: 477 TICLSAMITHLQEYGLEHIFGLTKYFQSFSTRSHMLVNGTTLESLEIYRNSTDHSHRGSL 536
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
++ TLT +G RLLR+WV PL DR + RL AV E+ + +
Sbjct: 537 FWAVDKTLTRFGQRLLRKWVGRPLLDRERLEERLAAVQELLDK--------------QST 582
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
S V +E +LS+ D++R + RI++ T E ++V+Q LQ+
Sbjct: 583 SPVDDLE----RLLSTT------KADLERSLIRIYYGKCTRPELLSVLQT-------LQK 625
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ + + +S L+ I+ + P ++ L +N AA + D
Sbjct: 626 IASHYSSIKSPSDVAFNSPLIVNAIV--ALPKILDTVISYLDRINMYAAKKDDKYGFFR- 682
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKV 666
E+ + + + ELD + +++ + +E+++V+GI +LI +P V
Sbjct: 683 EEFHTEEIQDHQMGIAHVEHELDEHRAVAAQKIKQKMVEYVTVAGIEYLIAVPNKDIKNV 742
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P +W+K++ TK R+H+PEV+ + + + E L C A+ FL E Y + A
Sbjct: 743 PASWSKISGTKALSRFHTPEVIRLITERDQSREALAAACDKAFKDFLAEIAAEYQPLRDA 802
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
+ ALA LDCL +L+ ++ + +P F+ I I GRHP+ + L +++P T
Sbjct: 803 ISALATLDCLLSLSKVAAQPGYSKPTFLPSTSEPSISISQGRHPMAEQTLESSYIPFTTT 862
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L +ITGPNMGGKS ++R VALI +++Q+GSFVPA S L + D I+TR GA D
Sbjct: 863 LAHPSTLAHLITGPNMGGKSSFVRAVALIVLLSQIGSFVPADSLTLTLCDAIHTRAGARD 922
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
++ G STF+ E++E + ILR+ T +SLVI+DELGRGTSTHDG AIA + L +++ +C
Sbjct: 923 NLFAGESTFMVEVSETARILRSATPRSLVILDELGRGTSTHDGAAIAQSVLHHVVTETRC 982
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
+ LF+THY +A I G V H+ + G ++++T+LY+V G++
Sbjct: 983 LTLFITHYQNLARIADGLPG-VTNVHMKFNAQKGEDG------EEEITFLYEVGEGIAHR 1035
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA++P + A + +LE E+ R
Sbjct: 1036 SYGLNVARLARIPKKVLDVAAGKSKQLENEMRRR 1069
>gi|154319616|ref|XP_001559125.1| hypothetical protein BC1G_02289 [Botryotinia fuckeliana B05.10]
Length = 1115
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 322/957 (33%), Positives = 511/957 (53%), Gaps = 127/957 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E QV+++K K+ D LL++EVGYKF+FFGEDA AAKVL I +H
Sbjct: 211 TPMELQVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSESH 270
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
L++ F +ASIP RL VH +RLV AG+K+G+V+QTETAA+K G + PF R L+ +YT
Sbjct: 271 LNY-FASASIPVHRLPVHAKRLVAAGYKIGIVRQTETAALKKAGDNRNAPFVRKLTNVYT 329
Query: 196 KAT-------LEAAEDVGGGEDGCGGESNYLVCVVDDDGN-------------------- 228
K T L+ + GG G YL+C+ +
Sbjct: 330 KGTYIDDIDGLDTTDAPSGGAPATG----YLLCITETKAKGWGTDEKVEVDTTDAPSGGA 385
Query: 229 --------VGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSP 280
+ + + +G V +G++AV+ +TGDV+Y F DGF+R LE LL ++P
Sbjct: 386 PATGYLLCITETKAKGWGTDEKVEVGILAVQPATGDVIYDNFEDGFMRGELETRLLHIAP 445
Query: 281 AELLLGQPLSKQTEKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGE 335
ELL+ L+K T+K++ +G ++NV RVE + + + + V Y
Sbjct: 446 CELLIVGELTKATDKLVQHLSGSSTNVFGDRIRVERVGKSKTMAAESYSRVAQFYA---- 501
Query: 336 DTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR 395
D L ++ N + +E ++ + + L+ I H+ ++GLE + L F+
Sbjct: 502 DKLKAHQSSN-----NAREQELLEKVLKLTEPVTICLSAMITHMTEYGLEHVFDLTKYFQ 556
Query: 396 SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDR 455
S S M L+ NTL LE+ N ++ ++ G+L ++ T T +G RLLR+WV PL D+
Sbjct: 557 SFSARSHMLLNGNTLTSLEIYTNQTDYTQKGSLFWTLDKTQTKFGQRLLRKWVGRPLLDK 616
Query: 456 NLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDI 515
+ R+ AV E+ ++ + + D+ N+ + V RS D+
Sbjct: 617 QRLEERVAAVEELKDNANTPKV-------DKLNATLREV----------------RS-DL 652
Query: 516 QRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILT 575
+R + RI++ T E + V+Q + + H+ S L+ A+
Sbjct: 653 ERSLLRIYYGKCTRPELLTVLQTMQRIANEFA--HVKTPSDAGFESIALNEAV------- 703
Query: 576 ASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLIN 635
AS PA+ L +N +AA D + + + + + + + +++L++
Sbjct: 704 ASLPAIGEIVISFLDKINAQAARNDDKYAFFL-EHYETEAIGDHKCGIGAVEQDLEAHRM 762
Query: 636 MCRKQLGMRN-LEFMSVSGITHLIELP-ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALD 692
+ +L + + +++++GI +LIE+P + K VP +WAK++ TKK R+H+PEV+ L
Sbjct: 763 VAATKLSKKTPVTYVTIAGIEYLIEVPNTDLKNVPASWAKISGTKKMSRFHTPEVIKFLR 822
Query: 693 QLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPV 752
+ E L+ C AA+ +FL E +YA + + LA LDCL +LAT++ + +P
Sbjct: 823 ERDQHKESLSSACDAAFSTFLSEISTHYALIRDTISHLATLDCLLSLATVASLPGYCKPT 882
Query: 753 FVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ--IITGPNMGGKSCYIR 810
F E I + GRHP+++ +L ++PNDT+L ++ + ++TGPNMGGKS Y+R
Sbjct: 883 FTSSTE---ISVIGGRHPMVEQLLPSAYIPNDTSLSTSPDHTRALLLTGPNMGGKSSYVR 939
Query: 811 QVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCT 870
QVALI I+AQ+GS+VPA SA L +LDGIYTRMGA DS+ +STF+ EL+E + IL++
Sbjct: 940 QVALISILAQIGSYVPAESARLGLLDGIYTRMGAYDSLFTAQSTFMVELSETASILKSAG 999
Query: 871 AQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA------------ 918
+SLVI+DELGRGTSTHDGVAIA A LD+++ KC+ LF+THY +A
Sbjct: 1000 PRSLVILDELGRGTSTHDGVAIAEAVLDWVVRETKCLCLFITHYQTLASVARGFEKGKEL 1059
Query: 919 -DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ KFT VS + K + D+++T+LY+V GV+ S+G VA+
Sbjct: 1060 RNVHMKFTAERNGRRVSNADADK----DNEDFDEEITFLYEVGEGVAHRSYGLNVAR 1112
>gi|340520005|gb|EGR50242.1| DNA mismatch repair protein [Trichoderma reesei QM6a]
Length = 1095
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 316/934 (33%), Positives = 497/934 (53%), Gaps = 85/934 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AAK LGI AH
Sbjct: 194 TPMEIQFLDIKRKHMDTILIVEVGYKFRFFGEDARIAAKELGIVCIPGKMRYDEHPSEAH 253
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ LYT
Sbjct: 254 LD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNAPFVRKLTNLYT 312
Query: 196 KATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVEIS 253
K T +D YL+C+ + G G D V +G++AV+ +
Sbjct: 313 KGTYVDENGELDSQDASAPSGGYLLCITETASK---------GAGTDENVNVGILAVQPA 363
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-----R 308
TGD++Y F D F+RS +E LL +SP E L+ ++K T+K++ +G ++NV R
Sbjct: 364 TGDIIYDNFEDCFMRSEIETRLLHISPCEFLIVGDITKGTDKLIQHLSGSSTNVFGDRAR 423
Query: 309 VECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA 368
VE + + A + V Y + ++ S+NE + + ++ ++ +P+
Sbjct: 424 VERVPKSKTMAAEAYSHVTQFYADQVKEA-SDNETAS----------ALLDKVLRLPEAI 472
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
L+ I HL+++GLE I L F+S S M ++ TL+ LEV RN+++ S+ G+L
Sbjct: 473 TICLSAMITHLQEYGLEHIFGLTKYFQSFSTRSHMLINGTTLESLEVYRNSTDHSQKGSL 532
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
++ TLT +G RLLR+WV PL DR + RL AV E+ + + +
Sbjct: 533 FWAVDKTLTRFGQRLLRKWVGRPLLDRERLDERLAAVQELLDKQSTPPVDD--------- 583
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
L +LT+ D++R + RI++ T E ++V+Q LQ+
Sbjct: 584 -------------LERLLTTT--KADLERSLIRIYYGKCTRPELLSVLQT-------LQK 621
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ + + S ++ I S P ++ L +N AA + D
Sbjct: 622 IASHYSSIKSASDVPFDSPVIVNAI--TSLPQILDSVVSYLDRINAYAAKKDDKYGFFR- 678
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-V 666
E+ + + + ELD + +++ +++E+++V+GI +LI +P + K V
Sbjct: 679 EEYHTEEIQDHQLGIAHVEHELDEHRAVAAQKIKAKSVEYVTVAGIEYLIAVPNKDIKNV 738
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P +W+K++ TK R+H+PEV+ + + E L C A+ FL Y + A
Sbjct: 739 PASWSKISGTKALSRFHTPEVIRLITERDQHREALAAACDKAFKDFLASIASEYQPLRDA 798
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
+ ALA LDCL +L+ ++ + +P F+ I I GRHP+ + +L +++P T
Sbjct: 799 ISALATLDCLLSLSKVAAQPGYTKPTFLPATSEPSISISQGRHPMAEHMLESSYIPFSTT 858
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L +ITGPNMGGKS ++R VALI +++Q+GSFVPA + EL D I+TR GA D
Sbjct: 859 LSHPSALAHLITGPNMGGKSSFVRAVALIVLLSQIGSFVPADALELTFCDAIHTRAGARD 918
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
++ G STF+ E+ E + ILR+ T +SLVI+DELGRGTSTHDG AIA A L +++ +C
Sbjct: 919 NLFAGESTFMVEVTETARILRSATPRSLVILDELGRGTSTHDGAAIAQAVLHHVVTETRC 978
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
+ LF+THY +A I G V H+ + + GP ++++T+LY+V G++
Sbjct: 979 LTLFITHYQNLAHIADGLPG-VTNVHMKF---NAEKGP---DGEEEITFLYEVGEGIAHR 1031
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA++P + A + +LE E+ R
Sbjct: 1032 SYGLNVARLARIPKKVLDVAAEKSRQLENEMRRR 1065
>gi|440471625|gb|ELQ40614.1| DNA mismatch repair protein Msh3 [Magnaporthe oryzae Y34]
Length = 1151
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 342/950 (36%), Positives = 519/950 (54%), Gaps = 96/950 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D +L++EVGYKFRFFGEDA +A K L I AH
Sbjct: 227 TPMELQFLEIKRKHMDTVLIVEVGYKFRFFGEDARIAGKELSIVCIPGKFRYDEHPSEAH 286
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L +YT
Sbjct: 287 LD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNAPFVRKLCEVYT 345
Query: 196 KATL--EAAE-DVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVV 248
K T E E D G G GG YL+C+ + G G D V +G+V
Sbjct: 346 KGTYIDEMGEMDAQTGASGAHSGG---YLLCLTE---------TAAKGSGTDEKVDVGLV 393
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TGD++Y F DGF+RS +E LL +SP ELL+ LSK TEK++ +G ASNV
Sbjct: 394 AVQPATGDIIYDSFEDGFMRSEIETRLLHISPCELLIVGQLSKATEKLVKHLSGSASNVF 453
Query: 308 ----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
RVE ++ A + V Y G+ S +D+ + ++ ++N
Sbjct: 454 GDRTRVERVAKGKTTPAEASSHVTKFY--AGKLKGSTQDDRAA---------ALLDKVLN 502
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I HL +FGLE I L F+S S M ++ TL+ LEV RN+++ +
Sbjct: 503 LPEPVTLCLSAMITHLTEFGLEHIFDLTKYFQSFSTRSHMCINGTTLESLEVYRNSTDHT 562
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
E G+LL ++ T T +G R+LR+W+ PL D+ + R+ AV E+ E
Sbjct: 563 EKGSLLWALDKTRTRFGQRMLRKWLGRPLLDKERLDDRVAAVEELFE------------- 609
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
N + VE + +LSS+ T D++R + RIF+ T E +AV+Q
Sbjct: 610 ----NRNGPQVE-KLQKLLSSIKT------DLERSLIRIFYGRCTRPELLAVLQT----- 653
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
LQ++ ++ ++ + S L+ + AS P + L+ +N +AA + D
Sbjct: 654 --LQRIAVEYIVVKEPSQTGFKSNLVSEAL--ASLPRIREIVVSYLNRINPDAARKNDKY 709
Query: 604 NLM-----IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHL 657
+ E+ + ++ + ++ELD+ + LG + +++++V+GI +L
Sbjct: 710 EFFRDESDDTGDDGEDEITTQKMSIAAVEQELDAHRSDAAATLGRKKAVDYVTVAGIEYL 769
Query: 658 IELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
IE+P KVP +WAK++ TKK R+H+PEV+ + + E L C AA+ + L
Sbjct: 770 IEVPNTEIRKVPASWAKISGTKKLSRFHTPEVVRLIAERDQHKEALAAACDAAFKAMLAS 829
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
Y + AV +LA LDCL + A ++ + +P+ + D P I + GRHP+ +
Sbjct: 830 IADQYQPLRDAVSSLATLDCLLSFAQVAALPGYSKPIILPDSHPPTIAVAGGRHPIAEHT 889
Query: 776 LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
L ++P T L + ++TGPNMGGKS ++R +AL+ ++AQVGSFVPA S L +
Sbjct: 890 LPSGYIPFSTTLSSPAPLAHLVTGPNMGGKSSFVRALALLVLLAQVGSFVPADSLRLTLS 949
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D IYTRMGASD++ G STF+ E+ E + ILR T +SLV++DELGRGTSTHDG AIA+A
Sbjct: 950 DAIYTRMGASDNLFAGESTFMVEVGETAAILRTATPRSLVLLDELGRGTSTHDGAAIAHA 1009
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSD---- 950
LD+++ + +C+ LF+THY +A + TG V H+ + +S D D
Sbjct: 1010 VLDHVVRNTRCLTLFITHYQSLARVAEGLGTGLVRNVHMRFTSSRDDNDDGDKDQDDDVG 1069
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+++T+LY+V GV+ S+G VA+LA++P + A + K+E +V +R
Sbjct: 1070 ENITFLYEVADGVAHRSYGLNVARLARIPRKILEVAARKSRKMEEDVRTR 1119
>gi|408397888|gb|EKJ77025.1| hypothetical protein FPSE_02669 [Fusarium pseudograminearum CS3096]
Length = 1105
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 322/935 (34%), Positives = 499/935 (53%), Gaps = 86/935 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D +L++EVGYKFRFFGEDA +AAK L I AH
Sbjct: 203 TPMEIQFLEIKRKHMDTVLIVEVGYKFRFFGEDARIAAKELSIVCIPGKMRYDEHPSEAH 262
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
+D F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ LYT
Sbjct: 263 ID-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNTPFVRKLTNLYT 321
Query: 196 KAT-LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVEI 252
K T ++ ++ YL+C+ + G G D V +G++AV+
Sbjct: 322 KGTYIDENGELDQSGGSGAPSGGYLLCITESKAK---------GSGTDEKVDVGIIAVQP 372
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV----- 307
+TGD++Y F DGF+RS +E LL +SP E L+ L+K T+K++ +G ++NV
Sbjct: 373 ATGDIIYDHFEDGFMRSEIETRLLHISPCEFLIVGDLTKGTDKLVQHLSGSSTNVFGDRS 432
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL 367
RVE ++ + A + V Y + +D N +D++ + + ++ +P+
Sbjct: 433 RVERVPKEKTMAAEAYSHVTQFYADKLKD---NTQDESA--------AALLNKVLKLPEP 481
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
L+ I HL+++GLE I L F+S S M ++ TL+ LEV RN+++ SE G+
Sbjct: 482 VTICLSAMINHLQEYGLEHIFDLTKYFQSFSTRSHMLINGTTLESLEVYRNSTDHSEKGS 541
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
L ++ TLT G RLLR+WV PL D+ L+ ARL+AV E+
Sbjct: 542 LFWALDKTLTRPGQRLLRKWVGRPLLDQELLEARLNAVEELL------------------ 583
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
N T Q +L++ T D++R + RI++ T E ++V+QA+
Sbjct: 584 NKQSTAPVSQLESLLANTKT------DLERSLIRIYYGKCTRPELLSVLQALQRVASYYS 637
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+ + + S LL I S P ++ L +N AA + D
Sbjct: 638 TI-------KAPSDAPFSSPLLSEAI--CSLPQILDTVVSYLERINLVAARKDDKYGFFR 688
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK- 665
Q ++ + + + ELD + +++ + +++++V+GI LIE+P A+ K
Sbjct: 689 -DEFQTEDMQDHQLGIAHVEHELDGHRAVAAEKIKKKMVDYVTVAGIEFLIEVPNADIKH 747
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP +WAK++ TKK R+H+PEVL + + E L C A+ L Y +
Sbjct: 748 VPASWAKISGTKKLSRFHTPEVLRFITERDQHREALAAACDKAFKDLLASIASDYQPLRD 807
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDT 785
AV ALA LDC+ +L+ ++ + RP F+ I I +GRH + + L ++P T
Sbjct: 808 AVSALATLDCVLSLSKVAAQPGYSRPSFLPPSTDPTISITNGRHAIAEHTLEGGYIPFST 867
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L +ITGPNMGGKS ++R +ALI +++QVGS+VPA S L + D I+TR GA
Sbjct: 868 TLAHPSPLAHLITGPNMGGKSSFVRALALIVLLSQVGSYVPADSLSLTLCDAIHTRTGAR 927
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D++ G STF+ E++E + ILR+ +SLVI+DELGRGTSTHDG AIA A L +++ +
Sbjct: 928 DNLFAGESTFMVEVSETARILRSAGPRSLVILDELGRGTSTHDGAAIAQAVLQHVVTETQ 987
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
C+ LF+THY +A + G V H+ + G +++VT+LY+V GV+
Sbjct: 988 CLTLFITHYQNLARVAEGLDG-VKNVHMKFKAEKGEDG------EEEVTFLYEVGEGVAH 1040
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA++P I A + ++++E E+ R
Sbjct: 1041 RSYGLNVARLARIPKKVIDVAALKSSQIEQEMKMR 1075
>gi|389624605|ref|XP_003709956.1| DNA mismatch repair protein MSH3 [Magnaporthe oryzae 70-15]
gi|190359846|sp|A4R0R0.1|MSH3_MAGO7 RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|351649485|gb|EHA57344.1| DNA mismatch repair protein MSH3 [Magnaporthe oryzae 70-15]
gi|440481983|gb|ELQ62513.1| DNA mismatch repair protein Msh3 [Magnaporthe oryzae P131]
Length = 1151
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 342/950 (36%), Positives = 519/950 (54%), Gaps = 96/950 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D +L++EVGYKFRFFGEDA +A K L I AH
Sbjct: 227 TPMELQFLEIKRKHMDTVLIVEVGYKFRFFGEDARIAGKELSIVCIPGKFRYDEHPSEAH 286
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L +YT
Sbjct: 287 LD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNAPFVRKLCEVYT 345
Query: 196 KATL--EAAE-DVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVV 248
K T E E D G G GG YL+C+ + G G D V +G+V
Sbjct: 346 KGTYIDEMGEMDAQTGASGAHSGG---YLLCLTE---------TAAKGSGTDEKVDVGLV 393
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TGD++Y F DGF+RS +E LL +SP ELL+ LSK TEK++ +G ASNV
Sbjct: 394 AVQPATGDIIYDSFEDGFMRSEIETRLLHISPCELLIVGQLSKATEKLVKHLSGSASNVF 453
Query: 308 ----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
RVE ++ A + V Y G+ S +D+ + ++ ++N
Sbjct: 454 GDRTRVERVAKGKTTPAEASSHVTKFY--AGKLKGSTQDDRAA---------ALLDKVLN 502
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I HL +FGLE I L F+S S M ++ TL+ LEV RN+++ +
Sbjct: 503 LPEPVTLCLSAMITHLTEFGLEHIFDLTKYFQSFSTRSHMCINGTTLESLEVYRNSTDHT 562
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
E G+LL ++ T T +G R+LR+W+ PL D+ + R+ AV E+ E
Sbjct: 563 EKGSLLWALDKTRTRFGQRMLRKWLGRPLLDKERLDDRVAAVEELFE------------- 609
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
N + VE + +LSS+ T D++R + RIF+ T E +AV+Q
Sbjct: 610 ----NRNGPQVE-KLQKLLSSIKT------DLERSLIRIFYGRCTRPELLAVLQT----- 653
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
LQ++ ++ ++ + S L+ + AS P + L+ +N +AA + D
Sbjct: 654 --LQRIAVEYIVVKEPSQTGFKSNLVSEAL--ASLPRIREIVVSYLNRINPDAARKNDKY 709
Query: 604 NLM-----IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHL 657
+ E+ + ++ + ++ELD+ + LG + +++++V+GI +L
Sbjct: 710 EFFRDESDDTGDDGEDEITTQKMSIAAVEQELDAHRSDAAATLGRKKAVDYVTVAGIEYL 769
Query: 658 IELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
IE+P KVP +WAK++ TKK R+H+PEV+ + + E L C AA+ + L
Sbjct: 770 IEVPNTEIRKVPASWAKISGTKKLSRFHTPEVVRLIAERDQHKEALAAACDAAFKAMLAS 829
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
Y + AV +LA LDCL + A ++ + +P+ + D P I + GRHP+ +
Sbjct: 830 IADQYQPLRDAVSSLATLDCLLSFAQVAALPGYSKPIILPDSHPPTIAVAGGRHPIAEHT 889
Query: 776 LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
L ++P T L + ++TGPNMGGKS ++R +AL+ ++AQVGSFVPA S L +
Sbjct: 890 LPSGYIPFSTTLSSPAPLAHLVTGPNMGGKSSFVRALALLVLLAQVGSFVPADSLRLTLS 949
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D IYTRMGASD++ G STF+ E+ E + ILR T +SLV++DELGRGTSTHDG AIA+A
Sbjct: 950 DAIYTRMGASDNLFAGESTFMVEVGETAAILRTATPRSLVLLDELGRGTSTHDGAAIAHA 1009
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSD---- 950
LD+++ + +C+ LF+THY +A + TG V H+ + +S D D
Sbjct: 1010 VLDHVVRNTRCLTLFITHYQSLARVAEGLGTGLVRNVHMRFTSSRDDNDDGDKDQDDDVG 1069
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+++T+LY+V GV+ S+G VA+LA++P + A + K+E +V +R
Sbjct: 1070 ENITFLYEVADGVAHRSYGLNVARLARIPRKILEVAARKSRKMEEDVRTR 1119
>gi|302916663|ref|XP_003052142.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733081|gb|EEU46429.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1100
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 320/933 (34%), Positives = 501/933 (53%), Gaps = 82/933 (8%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AAK L I AH
Sbjct: 198 TPMEIQFLDIKRKHLDTILIVEVGYKFRFFGEDARIAAKELSIVCIPGKMRYDEHPSEAH 257
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ LYT
Sbjct: 258 LD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNTPFIRKLTNLYT 316
Query: 196 KAT-LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIST 254
K T ++ ++ G YL+C+ + + +G V +G++AV+ +T
Sbjct: 317 KGTYIDENGELDQGSGSGAPSGGYLLCITE-------TKAKGWGTDEKVDVGILAVQPAT 369
Query: 255 GDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-----RV 309
GD++Y F DGF+RS +E LL +SP E L+ L+K T+K++ +G ++NV RV
Sbjct: 370 GDIIYDNFEDGFMRSEIETRLLHISPCEFLIVGDLTKGTDKLVQHLSGSSTNVFGDRSRV 429
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
E R + A + V Y + ++ N +D+ + ++ ++ +P+
Sbjct: 430 ERVPRGKTMAAEAYSHVTQFYADKLKE---NTQDETA--------AALLDKVLKLPEPVT 478
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
L+ I HL+++GLE I L F+S S M ++ TL+ LEV RN+++ SE G+L
Sbjct: 479 ICLSAMINHLQEYGLEHIFDLTKYFQSFSTRSHMLINGTTLESLEVYRNSTDHSEKGSLF 538
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
++ T+T G RLLR+WV PL D+ L+ RL AV E+ E K S
Sbjct: 539 WALDKTITRPGHRLLRKWVGRPLLDQELLEGRLAAVEELLE----------------KQS 582
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
+ Q +L++ T D++R + RI++ T E ++V+QA+ +
Sbjct: 583 TAPVA--QLEALLANAKT------DLERSLIRIYYGKCTRPELVSVLQALQKVASHYSTV 634
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
+ TS L+ A+ + P ++ L +N AA + D
Sbjct: 635 KSPSD--APFTSPLLNDAI-------CALPQILDTVISYLEQINLGAARKDDKYGFFR-D 684
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VP 667
Q ++ + + + ELD + +++ + +E+++V+GI +LIE+P + K VP
Sbjct: 685 EYQTEDMQDHQLGIAHVEHELDGHRAVAAEKIKKKTVEYVTVAGIEYLIEVPNTDIKNVP 744
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+W+K++ TKK R+H+PEVL + + E L C A+ L Y + AV
Sbjct: 745 ASWSKISGTKKLSRFHTPEVLRLITERDQHREALAAACDKAFKDLLAAISADYQPLRDAV 804
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNL 787
ALA LDCL +L+ ++ + RP F+ I I +GRH + + L ++P T L
Sbjct: 805 SALATLDCLLSLSKVAAQPGYSRPSFLPSSSDPTISITNGRHAIAEHTLEGGYIPFSTKL 864
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ITGPNMGGKS ++R +ALI ++AQVGSFVPA + L + D I+TR GA D+
Sbjct: 865 AHPSPLAHLITGPNMGGKSSFVRALALIVLLAQVGSFVPADALSLTLCDAIHTRTGARDN 924
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ G STF+ E++E + ILR+ +SLVI+DELGRGTSTHDG AIA A L +++ +C+
Sbjct: 925 LFAGESTFMVEVSETARILRSAGPRSLVILDELGRGTSTHDGAAIAQAVLQHVVTETRCL 984
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF+THY +A + G V H+ + G +++VT+LY+V GV+ S
Sbjct: 985 TLFITHYQNLARVAEGLDG-VKNVHMKFKAEKGADG------EEEVTFLYEVGEGVAHRS 1037
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+G VA+LA++P I A++ ++++E E+ R
Sbjct: 1038 YGLNVARLARIPKKVIEVASLKSSQMEQEMRMR 1070
>gi|389749124|gb|EIM90301.1| DNA mismatch repair protein MSH3 [Stereum hirsutum FP-91666 SS1]
Length = 1098
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 329/937 (35%), Positives = 507/937 (54%), Gaps = 75/937 (8%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K+YTPLE QV +LK KY VLLM EVGYK+ F+ DA +AAK LGI + NF TASIP
Sbjct: 199 KRYTPLELQVRQLKDKYEGVLLMFEVGYKYMFYDNDARIAAKELGIVCFVKRNFETASIP 258
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
T R ++H+++L++ G KVG++ QTETAA+K G + PF R L+ LYT T D
Sbjct: 259 THRGDIHLKKLLSQGHKVGIIAQTETAALKKVGENRNAPFTRELAHLYTATTFVDEMD-- 316
Query: 207 GGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGF 266
D G + L+CVV++ G G V +G++ V +TGDV + EF DG
Sbjct: 317 -SVDASGASAPLLMCVVEEP-------KGGMGVDEKVIVGMIVVCPNTGDVTWDEFEDGH 368
Query: 267 LRSGLEAVLLSLSPAELLL-GQPLSKQTEKML---LAYAGPASNVRVECASRDCFIGGGA 322
+R+ LE ++ PAELLL GQ LSK TE+ML + +A +R+E +D A
Sbjct: 369 MRTELETRMVHTKPAELLLSGQKLSKPTERMLGYFVTHANGDHKIRME-RYKDPMTYSDA 427
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
V + Y T S+ ++ E + + + P V ALA IRHL+ F
Sbjct: 428 FEYVSAFYTR---KTTSSKASESFKSGE------LMAAVTDFPKQVVIALAQCIRHLEAF 478
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
+ + F + + M L+ NTL LE+ RN ++ + G+L+ I++ T T +GSR
Sbjct: 479 DIADSLLATKFFSAFITTNHMLLNGNTLTNLEIYRNETDFTTRGSLMWILDRTTTKFGSR 538
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI- 501
LLR WV PL ++ + R D V EI + P +
Sbjct: 539 LLRSWVGRPLVNKLALQERTDTVEEI------------------------VASPSMKLVQ 574
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L S L L PD+ +G++RI + TP E ++ A ++ I + V+
Sbjct: 575 LRSALRGL---PDLAKGLSRIQYGKCTPKELSVLLPA-------FNKVAIIFPAMDNVSD 624
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
S +L +I A+ P + +L+S + + A +GD LM + ++ +A A
Sbjct: 625 VGFKSPILNDII--ATLPRLREPVQELISMIVLKRAAEGDK-TLMWSDSEKYPALAEADM 681
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA--NFKVPLNWAKVNSTKKT 679
+Q+ + +L + R+ L L++ S G +L+E+P + +VP W ++ST +
Sbjct: 682 GIQAVEMDLADELKSIRRVLKKPALQWSSSRGDEYLVEIPKAESSRVPATWHLISSTSRF 741
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG-GYYAEFQAAVQALAALDCLHA 738
RYHSP V + + A E L A+ SFL E +YA + AV LA DCL +
Sbjct: 742 RRYHSPVVKAKVQERAQFKEMLEAAANDAFKSFLNEISQNHYALLRDAVNKLAIADCLMS 801
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIIT 798
LA ++ ++V+P F D+ + ++I GRHP + + + FVPN + + +IIT
Sbjct: 802 LALVAMKGDYVKPEFTDEVDTLEI--IDGRHPGGEELKSEPFVPNSVTMGQGGQRSKIIT 859
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNMGGKS ++ +ALI IMAQ+GS+VPA + +L ++D I TRMGASD + +GRSTF+ E
Sbjct: 860 GPNMGGKSSSVKMIALIAIMAQIGSYVPAKAVKLSMMDSILTRMGASDELARGRSTFMVE 919
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA 918
++E S IL T++SLVI+DELGRGTST DG+AIA A + +L++ KKC LF+THYP +A
Sbjct: 920 MSETSDILSQATSKSLVILDELGRGTSTFDGMAIAQAAMHHLVQVKKCKTLFITHYPLVA 979
Query: 919 -DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
+++ +F V H+ + ++ G +++++LY++ G++ SFG + +LA
Sbjct: 980 TELERRFPQEVQNLHMGFREESRINGI------REISFLYRLTEGLATESFGIECGRLAG 1033
Query: 978 LPPSCISRATVIAAKLEAEVSSR-VQNRSAKRDLLVK 1013
+P + + V AAK+ +V R +N++ K LL++
Sbjct: 1034 IPEEVLQASAVQAAKMRRQVEERHRRNKTRKAALLLQ 1070
>gi|46125469|ref|XP_387288.1| hypothetical protein FG07112.1 [Gibberella zeae PH-1]
Length = 1105
Score = 518 bits (1333), Expect = e-143, Method: Compositional matrix adjust.
Identities = 323/936 (34%), Positives = 499/936 (53%), Gaps = 88/936 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D +L++EVGYKFRFFG+DA +AAK L I AH
Sbjct: 203 TPMEIQFLEIKRKHMDTVLIVEVGYKFRFFGDDARIAAKELSIVCIPGKMRYDEHPSEAH 262
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
+D F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ LYT
Sbjct: 263 ID-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNTPFVRKLTNLYT 321
Query: 196 KAT-LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVEI 252
K T ++ ++ YL+C+ + G G D V +G++AV+
Sbjct: 322 KGTYIDENGELDQSGGSGAPSGGYLLCITESKAK---------GSGTDEKVNVGIIAVQP 372
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV----- 307
+TGD++Y F DGF+RS +E LL +SP E L+ L+K T+K++ +G ++NV
Sbjct: 373 ATGDIIYDHFEDGFMRSEIETRLLHISPCEFLIVGDLTKGTDKLVQHLSGSSTNVFGDRS 432
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG-IMNMPD 366
RVE ++ + A + V Y + +D N +D+ +A+ G ++ +P+
Sbjct: 433 RVERVPKEKTMAADAYSHVTQFYADKLKD---NAQDETA---------AALLGKVLKLPE 480
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
L+ I HL+++GLE I L F+S S M ++ TL+ LEV RN+++ SE G
Sbjct: 481 PVTICLSAMINHLQEYGLEHIFDLTKYFQSFSTRSHMLINGTTLESLEVYRNSTDHSEKG 540
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L ++ TLT G RLLR+WV PL D+ L+ ARL+AV E+
Sbjct: 541 SLFWALDKTLTRPGQRLLRKWVGRPLLDQELLEARLNAVEELL----------------- 583
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
N T Q +L++ T D++R + RI++ T E ++V+QA+
Sbjct: 584 -NKQSTAPVSQLESLLANTKT------DLERSLIRIYYGKCTRPELLSVLQALQRVASYY 636
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
+ + + S LL I S P ++ L +N AA + D
Sbjct: 637 STI-------KAPSDAPFSSPLLSEAI--CSLPQILDTVVSYLERINLVAARKDDKYGFF 687
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK 665
Q ++ + + + ELD + +++ + +++++V+GI LIE+P A+ K
Sbjct: 688 R-DEFQTEDMQDHQLGIAHVEHELDGHRAVAAEKIKKKMVDYVTVAGIEFLIEVPNADIK 746
Query: 666 -VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP +WAK++ TKK R+H+PEVL + + E L C A+ L Y +
Sbjct: 747 HVPASWAKISGTKKLSRFHTPEVLRFITERDQHREALAAACDKAFKDLLASIASDYQPLR 806
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
AV ALA LDC +L+ ++ + RP F+ I I +GRH + + L ++P
Sbjct: 807 DAVSALATLDCALSLSKVAAQPGYSRPSFLPSSTDPTISITNGRHAIAEHTLEGGYIPFS 866
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T L +ITGPNMGGKS ++R +ALI +++QVGS+VPA S L + D I+TR GA
Sbjct: 867 TTLAHPSPLAHLITGPNMGGKSSFVRALALIVLLSQVGSYVPADSLSLTLCDAIHTRTGA 926
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
D++ G STF+ E++E + ILR+ +SLVI+DELGRGTSTHDG AIA A L +++
Sbjct: 927 RDNLFAGESTFMVEVSETARILRSAGPRSLVILDELGRGTSTHDGAAIAQAVLQHVVTET 986
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
+C+ LF+THY +A + G V H+ + G +++VT+LY+V GV+
Sbjct: 987 RCLTLFITHYQNLARVAEGLDG-VKNVHMKFKAEKGEDG------EEEVTFLYEVGEGVA 1039
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA++P I A + ++++E E+ R
Sbjct: 1040 HRSYGLNVARLARIPKKVIDVAALKSSQIEQEMKMR 1075
>gi|342866487|gb|EGU72148.1| hypothetical protein FOXB_17392 [Fusarium oxysporum Fo5176]
Length = 1108
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 323/936 (34%), Positives = 503/936 (53%), Gaps = 88/936 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AAK L I AH
Sbjct: 206 TPMEIQFLDIKRKHMDTILIMEVGYKFRFFGEDARIAAKELSIVCIPGKMRYDEHPSEAH 265
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ LYT
Sbjct: 266 LD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNTPFVRKLTNLYT 324
Query: 196 KAT-LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIST 254
K T ++ ++ YL+C+ + +G V +G++AV+ +T
Sbjct: 325 KGTYIDENGELDQSGGSGAPSGGYLLCLTESKAKG-------WGTDEKVDVGIIAVQPAT 377
Query: 255 GDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-----RV 309
GD++Y F DGF+RS +E LL +SP E L+ L+K T+K++ +G ++NV R+
Sbjct: 378 GDIIYDNFEDGFMRSEIETRLLHISPCEFLIVGDLTKGTDKLVQHLSGTSTNVFGDRSRI 437
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
E + + A + V Y + +D N +D+ + ++ ++ +P+
Sbjct: 438 ERVPKSKTMAAEAYSHVTQFYADKLKD---NAKDETA--------AALLDKVLKLPESVT 486
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
L+ I HL+++GLE I L F+S S M ++ TL+ LEV RN+++ SE G+L
Sbjct: 487 ICLSAMINHLQEYGLEHIFDLTKYFQSFSTRSHMLINGTTLESLEVYRNSTDHSEKGSLF 546
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+N TLT G RLLR+WV PL D+ L+ ARL+AV E+ E K S
Sbjct: 547 WALNKTLTRPGHRLLRKWVGRPLLDQQLLEARLNAVEELLE----------------KQS 590
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
V + Q +L++ T D++R + RI++ T E +V+QA LQ++
Sbjct: 591 TVPV--SQLESLLANTKT------DLERSLIRIYYGKCTRPELFSVLQA-------LQRV 635
Query: 550 HIDGEYREKVTSKT---LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
Y V S + S+LL + + P ++ L +N AA + D
Sbjct: 636 ---ASYYSTVKSPSDAPFSSSLLNDAV--CALPQILDTVVSYLERINLVAAQKDDKYGFF 690
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK 665
Q ++ + + + ELD + +++ + +++++V+GI +LIE+P + K
Sbjct: 691 R-DEFQTEDMQDHQLGIAHVEHELDGHRAVAAEKIKKKTVDYVTVAGIEYLIEVPNTDIK 749
Query: 666 -VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP +WAK++ TKK R+H+PEVL + + E L C A+ L Y +
Sbjct: 750 NVPASWAKISGTKKLSRFHTPEVLRLITERDQHREALAAACDKAFTDLLASISADYQPLR 809
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
AV ALA LDC+ +L+ ++ + RP F+ I I +GRH + + L ++P
Sbjct: 810 DAVSALATLDCILSLSKVAAQPGYSRPSFLPSTADPTISITNGRHAIAEHTLDGGYIPFS 869
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T+L +ITGPNMGGKS ++R +ALI +++QVGS+VPA + L + D I+TR GA
Sbjct: 870 TSLMHPSPLAHLITGPNMGGKSSFVRALALIVLLSQVGSYVPADALSLTLCDAIHTRTGA 929
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
D++ G STF+ E++E + ILR+ +SLVI+DELGRGTSTHDG AIA A L +++
Sbjct: 930 RDNLFAGESTFMVEVSETARILRSAGPRSLVILDELGRGTSTHDGAAIAQAVLQHVVTET 989
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
+C+ LF+THY +A + G V H+ + G ++ VT+LY+V GV+
Sbjct: 990 RCLTLFITHYQNLARVAEGLDG-VKNVHMKFKAEKGEDG------EEQVTFLYEVGEGVA 1042
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
S+G VA+LA++P I A + + ++E E+ R
Sbjct: 1043 HRSYGLNVARLARIPKKVIDVAALKSGQMEQEMKIR 1078
>gi|322706947|gb|EFY98526.1| DNA mismatch repair protein msh3 [Metarhizium anisopliae ARSEF 23]
Length = 1101
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 325/952 (34%), Positives = 511/952 (53%), Gaps = 90/952 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +++K K+ D +L++EVGYKFRFFGEDA AAK LGI AH
Sbjct: 200 TPMEIQFLDIKRKHLDTILIVEVGYKFRFFGEDARTAAKELGIVCIPGKMRYDEHPSEAH 259
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +AS+P RL+VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ +YT
Sbjct: 260 LD-RFASASVPVHRLSVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNTPFVRKLTNVYT 318
Query: 196 KATLEAAEDVGGGEDGCGGE--SNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVE 251
K T ++VG + G YL+C+ + G G D V +G++AV+
Sbjct: 319 KGTY--IDEVGELDQRAEGAPAGGYLLCITETKSK---------GSGTDEKVDVGILAVQ 367
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV---- 307
+TGD+++ F DGF+RS +E LL +SP E L+ L+K T+K++ +G ++NV
Sbjct: 368 PATGDIIHDNFEDGFMRSEIETRLLHISPCEFLIVGDLTKGTDKLVQHLSGSSTNVFGDR 427
Query: 308 -RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
RVE R + A + V Y + +DT S NE + + ++ ++ +P+
Sbjct: 428 SRVERVPRPPTMAAEAYSHVTQFYADKLKDT-SQNETAS----------ALLDKVLKLPE 476
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
L+ I HLK++GLE I L F+S + M ++ TL+ LEV RN+++ +E G
Sbjct: 477 PVTICLSAMINHLKEYGLEHIFDLTKYFQSFTTRSHMLVNGTTLESLEVYRNSTDHAERG 536
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L ++ TLT +G RLLR+WV PL D++ + RL AV E+
Sbjct: 537 SLFWALDKTLTRFGQRLLRKWVGRPLLDQDRLDERLAAVEELL----------------- 579
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
N T +L++ T D++R + RI++ T E ++V+ L
Sbjct: 580 -NKQSTAPVDDLEKLLATTKT------DLERSLIRIYYGKCTRPELLSVLHT-------L 625
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
Q++ + + S LL I + P ++ L +N EAA + D
Sbjct: 626 QKIATHYSSIKSPSGNPFSSPLLATSI--NALPQILNTVVSYLERINLEAARKDDKYAFF 683
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK 665
+ Q ++ + + + EL + + +L + +++++V+GI LIE+P ++ K
Sbjct: 684 R-EDYQTEDIQDQQMGIAHVEHELGEHLKVAAAKLKKKKVDYVTVAGIEFLIEVPNSDIK 742
Query: 666 -VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP +W+K++ TKK R+H+PEV+ + + E L C A+ L E Y +
Sbjct: 743 NVPASWSKISGTKKVSRFHTPEVMRMISERDQHREALAAACDKAFKDLLAEISSDYQPLR 802
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
AV +LA+LDCL +L+ ++ + +P F+ + I GRHP+ + + ++P
Sbjct: 803 DAVSSLASLDCLLSLSKVAAQPGYNKPTFLPSSSEPTVAITQGRHPIAEHTIESGYIPFS 862
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T L +ITGPNMGGKS Y+R +ALI ++AQ+GSFVPA + L + D I+TR GA
Sbjct: 863 TTLAHPSPLAHLITGPNMGGKSSYVRALALIVLLAQIGSFVPADAISLTLCDAIHTRTGA 922
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
D++ G STF+ E++E + ILR+ T +SLVI+DELGRGTSTHDG AIA A L+++
Sbjct: 923 RDNLFAGESTFMVEVSETARILRSATPRSLVILDELGRGTSTHDGAAIAQAVLEHVATET 982
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
+C+ LF+THY +A + G V H+ + GP D+++T+LY+V GV+
Sbjct: 983 RCLTLFITHYQNLARVVEGLPG-VSNLHMRFKAGK---GP---DGDEEITFLYEVGEGVA 1035
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSD 1016
S+G VA+LA++P I A + ++E ++ R + + A R L +SD
Sbjct: 1036 HRSYGLNVARLARIPKKVIDVAANKSGEMELDMRMR-RLKGASRMLAEVMSD 1086
>gi|310800386|gb|EFQ35279.1| MutS domain V [Glomerella graminicola M1.001]
Length = 1119
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 340/975 (34%), Positives = 518/975 (53%), Gaps = 99/975 (10%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------------ 133
NKK TP+E Q +E+K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 197 NKKLTPMELQFLEIKRKHLDTVLIVEVGYKFRFFGEDARIAAKELSIVCIPGKYRYDEHS 256
Query: 134 --AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS 191
AH D F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+
Sbjct: 257 SEAHWD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNAPFIRKLT 315
Query: 192 ALYTKAT-LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVV 248
+YTK T ++ ++ G DG YL+C+ + N G G D V +G+V
Sbjct: 316 NVYTKGTYIDENGELETGGDGGAPSGGYLLCITETPTN---------GQGTDEKVEVGIV 366
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TGD++Y F DGF+RS +E LL +SP E ++ L+K ++K++ +G ++NV
Sbjct: 367 AVQPTTGDIIYDTFEDGFMRSEIETRLLHISPCEFVIVGDLTKGSDKLVQHLSGSSTNVF 426
Query: 308 ----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
RVE R + A + + Y D L D S +E I++
Sbjct: 427 GDRSRVERVPRTKTMAAEAYSHITQFYA----DKLQQTPDAAAS--------SLLERILH 474
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I HLK++GLE + L +F S S M L+ TL+ LEV RN ++ S
Sbjct: 475 LPEPVTICLSAMINHLKEYGLEHVFDLTKNFTSFSARQHMLLNGTTLEALEVYRNATDHS 534
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
E G+L ++ T T +G RLLR+WV PL D + + R+ AV E+ + S + V
Sbjct: 535 ERGSLFWALDKTTTRFGQRLLRKWVGRPLLDVSRLEERVAAVQELVDEQSSAKVDRLVA- 593
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
+LS G D++R + RI++ T E ++V+Q
Sbjct: 594 -----------------LLS------GTKTDLERSLIRIYYGKCTRPELLSVLQT----- 625
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
LQ++ + + + S L+ IL S P ++ L +N EAA + D
Sbjct: 626 --LQRIAMQYSTVKSADATGFTSPLISSAIL--SLPHILDLVVSYLDKINPEAARKDDKY 681
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELP- 661
N S Q ++ + + + ++ LD + L + +++++VSGI +LIE+
Sbjct: 682 NFFRESE-QTEDIEDHKMGIVAVEQSLDEHRSEAASSLSRKKPVDYVTVSGIEYLIEVNN 740
Query: 662 ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+ K +P +W K++ TKK R+H+P V+ + + E L C AA+ S L Y
Sbjct: 741 TDLKSIPASWIKISGTKKLSRFHTPAVVRLIAERDQHREALAAACDAAFTSLLHTIADAY 800
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
+ AV +LA LDCL +L+ ++ + +P F+ I I GRHP+ + L D +
Sbjct: 801 QPLRDAVSSLATLDCLLSLSRVAALPGYTKPTFLPAPTQPTISITQGRHPIAEHTLSDPY 860
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
+P T+L + +ITGPNMGGKS ++R VAL+ ++AQ+GSFVPA L + D I+
Sbjct: 861 IPFTTSLSSPSPLAHLITGPNMGGKSSFVRAVALLVLLAQIGSFVPADEFSLTLADAIHV 920
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA D++ G STF+ E++E + ILR T +SLV++DELGRGTSTHDG AIA+A LD++
Sbjct: 921 RMGARDNLAAGESTFMVEVSETARILRAATPRSLVVLDELGRGTSTHDGAAIAHAVLDHV 980
Query: 901 LEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKV--------MGPMDSKSDQ 951
+ +C+ LF+THY +A + G V H+ + + K G D+ +D+
Sbjct: 981 VRENRCLTLFITHYQNLARLADGIGEGLVKNVHMRFTATRKAGTEEGDGDEGGEDAGADE 1040
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL 1011
++T+LY+V GV+ S+G VA+LA++P I A + ++E V++R + RS R L
Sbjct: 1041 EITFLYEVGEGVAHRSYGLNVARLARIPRKVIEVAAQKSREMEQNVAAR-RLRSTARLL- 1098
Query: 1012 VKLSDQEQEAQENMP 1026
E EN P
Sbjct: 1099 -------AEVMENQP 1106
>gi|322701080|gb|EFY92831.1| DNA mismatch repair protein msh3 [Metarhizium acridum CQMa 102]
Length = 1098
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 328/952 (34%), Positives = 511/952 (53%), Gaps = 90/952 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +++K K+ D +L++EVGYKFRFFGEDA AAK LGI AH
Sbjct: 197 TPMEIQFLDIKRKHLDTILIVEVGYKFRFFGEDARTAAKELGIVCIPGKMRYDEHPSEAH 256
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +AS+P RL+VH +RLV AG KVGVV+Q ETAA+K G + PF R L+ +YT
Sbjct: 257 LD-RFASASVPVHRLSVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNTPFIRKLTNVYT 315
Query: 196 KATLEAAEDVGGGEDGCGGE--SNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVE 251
K T ++VG + G YL+C+ + G G D V +G++AV+
Sbjct: 316 KGTY--IDEVGELDQQAEGAPAGGYLLCITETKSK---------GSGTDEKVDVGILAVQ 364
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV---- 307
+TGD++Y F DGF+RS +E LL +SP E L+ L++ T+K++ +G ++NV
Sbjct: 365 PATGDIIYDNFEDGFMRSEIETRLLHISPCEFLIVGDLTRGTDKLVQHLSGSSTNVFGDR 424
Query: 308 -RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
RVE R + A + V Y + +DT S NE + + ++ ++ +P+
Sbjct: 425 SRVERVPRPPTMAAEAYSHVTQFYADKLKDT-SQNETAS----------ALLDKVLKLPE 473
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
L+ I HLK++GLE I L F+S + M ++ TL+ LEV RN+++ +E G
Sbjct: 474 PVTICLSAMINHLKEYGLEHIFDLTKYFQSFTTRSHMLVNGTTLESLEVYRNSTDHAERG 533
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L ++ TLT +G RLLR+WV PL D++ + RL AV E+
Sbjct: 534 SLFWALDKTLTRFGQRLLRKWVGRPLLDQDRLEERLAAVEELL----------------- 576
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
N T +L++ D++R + RI++ T E ++V+Q L
Sbjct: 577 -NKQSTAPVDDLEKLLATTKI------DLERSLIRIYYGKCTRPELLSVLQT-------L 622
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
Q++ + +S S LL I + P ++ L +N EAA + D
Sbjct: 623 QKIATHYSSIKSPSSNPFSSPLLATSI--NALPQILNTVVSYLERINLEAARKDDKYAFF 680
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK 665
Q ++ + + + EL + + +L + +++++V+GI LIE+P ++ K
Sbjct: 681 R-EEYQTEDIQDQQMGIAHVEHELGEHLKVAAAKLKKKKVDYVTVAGIEFLIEVPNSDIK 739
Query: 666 -VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP +W+K++ TKK R+H+PEV+ + + E L C A+ + L E Y +
Sbjct: 740 NVPASWSKISGTKKVSRFHTPEVMRMISERDQHREALAAACDKAFKNLLAEISSDYQPLR 799
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
AV +LA+LDCL +L+ ++ + RP F+ + I GRHP+ + + ++P
Sbjct: 800 DAVSSLASLDCLLSLSKVAAQPGYHRPTFLPSSSEPTVAITQGRHPIAEHTIETGYIPFS 859
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T L +ITGPNMGGKS Y+R +ALI ++AQ+GSFVPA + L + D I+TR GA
Sbjct: 860 TTLAHPSPLAHLITGPNMGGKSSYVRALALIVLLAQIGSFVPADAISLTLCDAIHTRTGA 919
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
D++ G STF+ E++E + ILR+ T +SLVI DELGRGTSTHDG AIA A L+++
Sbjct: 920 RDNLFAGESTFMVEVSETARILRSATPRSLVIFDELGRGTSTHDGAAIAQAVLEHVATET 979
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
+C+ LF+THY +A + G V H+ + GP D+++T+LY+V GV+
Sbjct: 980 RCLTLFITHYQNLARVVEGLPG-VSNLHMKFKAGK---GP---DGDEEITFLYEVGEGVA 1032
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSD 1016
S+G VA+LA++P I A + ++E ++ R + R A R L +SD
Sbjct: 1033 HRSYGLNVARLARIPKKVIDVAANKSGEMELDMRMR-RLRGASRMLAEVVSD 1083
>gi|346979339|gb|EGY22791.1| DNA mismatch repair protein Msh3 [Verticillium dahliae VdLs.17]
Length = 1144
Score = 514 bits (1324), Expect = e-142, Method: Compositional matrix adjust.
Identities = 330/960 (34%), Positives = 520/960 (54%), Gaps = 97/960 (10%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------------ 133
NKK TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AA+ L I
Sbjct: 202 NKKLTPMEMQFLDIKRKHMDTVLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHP 261
Query: 134 --AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS 191
+HLD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+
Sbjct: 262 SESHLD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNAPFVRKLT 320
Query: 192 ALYTKATL--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGV 247
+YTK T E E GE+G + YL+C+ + G G D V +G+
Sbjct: 321 NVYTKGTYIDENGELDAQGENGAPA-AGYLLCITETPSK---------GQGTDEKVDVGI 370
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
VAV+ +TGD++Y F DGF+RS +E LL +SP E ++ L+K T+KM+ +G ++NV
Sbjct: 371 VAVQPATGDIIYDNFEDGFMRSEIETRLLHISPCEFVIVGDLTKGTDKMIRHLSGSSTNV 430
Query: 308 -----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
RVE R + A V Y + +DT + + D V ++ ++
Sbjct: 431 FGDRSRVERVPRSKTMAAEAYTHVTQFYADKMKDTAAESADNGTAV-------LLLDKVL 483
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
++P+ L+ I HLK++GLE I L F+S + M ++ +TL+ LEV RN+++
Sbjct: 484 HLPEAVTICLSAMITHLKEYGLEHIFDLTKYFQSFTTRQHMLINGSTLESLEVYRNSTDH 543
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
+E+G+L ++ T T +G RLLR+WV PL D + ++ R+ AV EIA G+ + +
Sbjct: 544 TEHGSLFWALDKTSTRFGQRLLRKWVGRPLLDDSQLAERVAAVEEIANGQGTPQVDK--- 600
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
L ++L +G D++R + R+++ + E +AV+Q++
Sbjct: 601 -------------------LEALL--VGIKTDLERSLIRMYYAKCSRPELLAVLQSLQRI 639
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
Q + + S + +ALL S P ++ L +N EAA + D
Sbjct: 640 ATQYATIKTASDI--GFASPLITNALL-------SLPHILDTIISYLDKINPEAARKDDK 690
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIE-L 660
N + Q ++ + + + ++ELD +LG + +++++V+GI +LIE L
Sbjct: 691 YNFFREAE-QNDDIQDFKMGIVAVEQELDEHRRDAAAKLGRKKPVDYVTVAGIEYLIEVL 749
Query: 661 PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG-G 718
+ K VP +WAK++ TKK R+H+PE + L E L C AA+ + L +
Sbjct: 750 NTDLKNVPASWAKISGTKKLSRFHTPEAVRLLAARDQNREALASACDAAFAALLHDLAHD 809
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
Y + AV +LA LDCL +LA ++R + +P F+ P QI + +GRHPV D L +
Sbjct: 810 AYQPLRDAVASLATLDCLMSLARVARLPGYTKPTFLPSSAPPQISVTAGRHPVADHTLPN 869
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
++P L + +ITGPNMGGKS ++R +AL+ ++AQ+GS+VPA + L LD I
Sbjct: 870 GYIPFTAALASPTPLAYLITGPNMGGKSSFVRALALLALLAQIGSYVPAEALTLAPLDAI 929
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+ RMGA D++ G STF EL+E S +LR T +SLV++DELGRGTSTHDG AIA+A L
Sbjct: 930 HARMGARDNLFAGESTFALELSETSRVLRAATPRSLVLLDELGRGTSTHDGAAIAHAVLH 989
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSH---KVMGPMDSKSD---- 950
++ + +C LF+THY +A + G + H+ + + + ++ +D
Sbjct: 990 HVAHNLRCPTLFITHYQNLARMADPTGEGPIRNVHMRFTATRPDGREAPDNEAGADGEGD 1049
Query: 951 ----------QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+++T+LY+V GV+ S+G VA+LA++P I+ A + +LE ++ R
Sbjct: 1050 DDVDAAAAADEEITFLYEVAEGVAHRSYGLNVARLARIPRKVINVAARKSRELERDMRIR 1109
>gi|19114864|ref|NP_593952.1| DNA mismatch repair protein [Schizosaccharomyces pombe 972h-]
gi|11230451|emb|CAB52164.2| MutS protein homolog 3 [Schizosaccharomyces pombe]
Length = 1004
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 310/954 (32%), Positives = 503/954 (52%), Gaps = 92/954 (9%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S T +TPLEQQ +ELK Y + +L IEVGYKFRFFG+DA++A++VLGI + +HN
Sbjct: 94 SKPTKQKSVFTPLEQQYLELKKNYQETILAIEVGYKFRFFGKDAKIASEVLGISCYFEHN 153
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
F+ AS+P++R++ H+ RL+N G KV VV+QTETAA+K+ + F R ++ + TK T
Sbjct: 154 FLNASVPSYRIDYHLERLINFGLKVAVVRQTETAALKSTSSSRNTLFDRRVARVLTKGTT 213
Query: 200 --EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
++ + G S +++CV D+ + K ++G V++G++A+++S+G
Sbjct: 214 LDDSFFRFEQTQHGTLQASQFILCVADN-VDKSKAKSG------RVQVGLIAIQLSSGTT 266
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN----VRVECAS 313
VY F D FLRS L+ L P EL+ LS ++ +L Y VRV+ A
Sbjct: 267 VYDHFQDDFLRSELQTRLSHFQPCELIYSNKLSSESVALLNHYVSTEKTCGRVVRVQHAV 326
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA 373
+ +V EN+ + S + E +E + ++ L++ L
Sbjct: 327 QQ---------DVKLALENLQDFFSSKCIMSGSKIIELH-----MEKVKSLHSLSIICLD 372
Query: 374 LTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
+ I +L +F LE + ++ M LS L+ LE+ N ++ + G+L +++
Sbjct: 373 MAISYLMEFSLEDLFVASNFYQPFDSISSMVLSKQALEGLELFVNQTDHTPVGSLFWVLD 432
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T T +G R+L+RW+ PL D+ I RLDAV E+A + NS V
Sbjct: 433 RTYTRFGQRMLQRWLQKPLVDKENIIERLDAVEELAFN---------------SNSQVQA 477
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ Y R PD+++G++RI+++ TPSE V++ A
Sbjct: 478 IRKMLY-----------RLPDLEKGLSRIYYQRCTPSEMFHVLKGFYKAASAFS------ 520
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI-ISNGQ 612
K + SALL+RLI P++ L +++ A+ + +++ I N
Sbjct: 521 ----KNSYSCFKSALLRRLI--QQLPSISSIIDHFLGMFDQKEAENNNKVDMFKDIDNFD 574
Query: 613 FSE------------VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL 660
SE + + ++ + E+D + R L NLEF + IE+
Sbjct: 575 LSEEPNDVDYELAQEIRELKMSILMVRTEMDFHLQELRDYLEYPNLEFSIWGNVKFCIEV 634
Query: 661 PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
K +P +W K++ST+ R+H+P++ + L +L+ E LTI + SFL +
Sbjct: 635 SKGCKKIPPDWIKLSSTRSLFRFHTPKIQSLLIELSSHEENLTISSEKIYRSFLSRISEH 694
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
Y E + L LDCL + A +S + RP F D ++ I RHP+++ + +
Sbjct: 695 YNELRNVTTVLGTLDCLISFARISSQSGYTRPEFSDK----ELLIHESRHPMIELLSDKS 750
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
FVPN +L ++ C +ITGPNMGGKS +++Q+AL IMAQ G FVPA SA L + D I
Sbjct: 751 FVPNHIHLSSDGVRCLLITGPNMGGKSSFVKQLALSAIMAQSGCFVPAKSALLPIFDSIL 810
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
RMG+SD++ STF+ E+ E +L T +S+VI+DELGRGTST DG AI+YA L Y
Sbjct: 811 IRMGSSDNLSVNMSTFMVEMLETKEVLSKATEKSMVIIDELGRGTSTIDGEAISYAVLHY 870
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
L ++ K +LFVTH+P + ++ +F G + +H+ YL S + ++ Q +++LYK+
Sbjct: 871 LNQYIKSYLLFVTHFPSLGILERRFEGQLRCFHMGYLKSKE---DFETSVSQSISFLYKL 927
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVK 1013
VPGV+ S+G VA++A +P S +SRAT I+ E ++R+A++++ ++
Sbjct: 928 VPGVASKSYGLNVARMAGIPFSILSRATEISENYEK------KHRNARKNVFIR 975
>gi|302799228|ref|XP_002981373.1| hypothetical protein SELMODRAFT_420798 [Selaginella moellendorffii]
gi|300150913|gb|EFJ17561.1| hypothetical protein SELMODRAFT_420798 [Selaginella moellendorffii]
Length = 654
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 324/749 (43%), Positives = 436/749 (58%), Gaps = 104/749 (13%)
Query: 220 VCVVDD-----DGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAV 274
+CVV++ N GK + V G FD R GVVAVE STGDV+YG F D R+ LE+
Sbjct: 1 MCVVEEAITEHKANAGK--DEVKG-SFDARFGVVAVETSTGDVMYGHFMDTVTRTELESR 57
Query: 275 LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMG 334
LL+ +PAELLL LS T+K+L+ YAG A++VR E + F GG +A + Y ++
Sbjct: 58 LLACAPAELLLSASLSTSTKKLLMDYAG-AADVRAEKTPENSFENGGTVAALADFYGSLA 116
Query: 335 EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
D+ +D + +E +M MP++ V A A +LKQF LE ++ LGA F
Sbjct: 117 SSK-KGCLDEKVD--------AGLEALMTMPEIVVAAFAHIFAYLKQFNLENVLRLGALF 167
Query: 395 RSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCD 454
R +G EMTLS NT++QLE+L N ++G+E G+L +MNHT T +G+RLL+ WV HPL D
Sbjct: 168 RPFAGQQEMTLSPNTIRQLEILHNQTDGTENGSLFWLMNHTKTAFGARLLKYWVAHPLRD 227
Query: 455 RNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPD 514
R LIS RLDAV+EIAES+G +K T+ +S L LG+ PD
Sbjct: 228 RMLISQRLDAVAEIAESIG------------DKGRGTTVATL------ASTLLLLGKLPD 269
Query: 515 IQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLIL 574
++RGITRI+H+TAT EFI V+ AI+ A Q Q++ + SALL RLI
Sbjct: 270 LERGITRIYHKTATTYEFINVINAIMKAASQFQRV------------RDARSALLSRLIS 317
Query: 575 TASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLI 634
+S +VI A KL++++N EAA GD +NL + GQ+ EV ++ ++S +E+L+S +
Sbjct: 318 AVTSTSVIDHANKLVTSLNAEAAAAGDKINLFVA--GQYPEVDECKETIKSIEEDLESFL 375
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
RK L + SGI +E N +W K+NSTKK RYH PEVL A +++
Sbjct: 376 PSYRKLLEVFK------SGI---LERLGNVVFGRDWVKINSTKKANRYHPPEVLEASERM 426
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
ALA E+L I C AWD FL +F Y+ EF+AAVQALAALDCL +LA +S N+ +VRP FV
Sbjct: 427 ALAKEQLNISCAKAWDMFLTDFTSYHMEFRAAVQALAALDCLDSLAVVSCNQGYVRPEFV 486
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
D E + I GRHPVLD+ L D FVPNDT + E E QIITGP MGGKSCYI QVAL
Sbjct: 487 D--EACLLKIEGGRHPVLDSTLQDAFVPNDTVVSGEGERSQIITGPKMGGKSCYIGQVAL 544
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
I IM+Q+GS+VPA++A+LHV D ++ G + Q
Sbjct: 545 ITIMSQIGSYVPAATAKLHVFDAVFRGDGQNPEGLQ------------------------ 580
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVS 934
GTSTHDG+ IAYA L +LL+ THY + ++ F V YH+S
Sbjct: 581 --------GTSTHDGITIAYAMLHHLLQEVH------THYLNVTEVVKLFPSQVQAYHMS 626
Query: 935 YLTSHKVMGPMDSKSDQD----VTYLYKV 959
YL + G +D S Q+ VT+LYK+
Sbjct: 627 YLV-ESLEGDLDKSSGQEVAQKVTFLYKL 654
>gi|443726706|gb|ELU13785.1| hypothetical protein CAPTEDRAFT_157997 [Capitella teleta]
Length = 823
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 334/911 (36%), Positives = 492/911 (54%), Gaps = 115/911 (12%)
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLE 200
MTASIPT RL +HV+RLV G+KVGVVKQTETAA+KA G ++ PF R LSALYTK+TL
Sbjct: 1 MTASIPTHRLFIHVQRLVAKGYKVGVVKQTETAALKAAGDNRSAPFTRELSALYTKSTL- 59
Query: 201 AAEDVGGGEDGCGGES--NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
EDV G S +L+C+ + D K R+ VVAV+ STGDVV
Sbjct: 60 IGEDVDPESSGDASHSVNTFLMCIHETDAPNQK-----------RRIAVVAVQPSTGDVV 108
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG----PASNVRVECASR 314
Y EF D R L+ + L P E+L LS QTE +L A +R+E
Sbjct: 109 YDEFIDDSGRHQLDLRISHLRPVEILCCDQLSPQTECLLSGMAAVNLTEDDQMRIERMPV 168
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F + A + ++ E PE ++ ++ MP + L
Sbjct: 169 ANFAASTSTAAITEFFKQNSE-------------PEH-----VLKFVLAMPQSVLCCLQA 210
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
I++L+ F L ++ + FR S + M LSA+TL+ LE+ RN ++G E G+L +N
Sbjct: 211 LIKYLRDFHLHSVLLNTSCFRHFSSDRQHMMLSASTLRNLEIFRNQTDGKEKGSLFWFLN 270
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T T +GSR L W++ PL + LI+ARLDAV EI DE +
Sbjct: 271 QTQTRFGSRRLHEWLSKPLVQKGLINARLDAVGEIIL--------------DENPA---- 312
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
L + +SL R PD+QR + I + + ++F++ +A+ +Q++ + +
Sbjct: 313 --------LRGLRSSLSRLPDLQRSLVTIQQKKCSTADFMSTCKAL----EQVKTVMENS 360
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+++ S LLK + T P ++ K S +++ AA GD NL I
Sbjct: 361 KFQ---------SDLLKNI--TERVPQLLSGVDKWTSNLSESAARVGDKTNLFI----DL 405
Query: 614 SE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNW 670
E VA+ + + + +L+ R++L LE+ V G L+E+ + VP +W
Sbjct: 406 PEAVAQRQSEISAVLNDLEDHKRTLRQKLSNPRLEYSCVQGTEFLVEVKNSQLQMVPKDW 465
Query: 671 AKVN------------STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG 718
K+N +TK R+HSP ++ + LA E+L + + AW FL F
Sbjct: 466 TKINRHDISSLHVFLNTTKAVSRFHSPFIVASSRTLAQLREQLLVDAQDAWLQFLSLFDK 525
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
+ +++ AV +A LDCL +LA +++ +F RP ++D QI I GRHPV+D +L +
Sbjct: 526 CFIQYRTAVGLIADLDCLFSLAQVAQQHDFCRPQILEDCH--QIAIQDGRHPVVDILLGE 583
Query: 779 N--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
N +VPN+TNL E C IITGPNMGGKS YIRQVA+I +++ +GSFVPASSAE+ +LD
Sbjct: 584 NQQYVPNNTNLKGTGERCMIITGPNMGGKSSYIRQVAVIALLSHIGSFVPASSAEIGILD 643
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
GI+TRMGA D + GRSTF+ EL E + IL++ T +SLVI+DELGRGTSTHDG AIA+AT
Sbjct: 644 GIFTRMGAHDEMFAGRSTFMVELQETNDILQSATDRSLVILDELGRGTSTHDGQAIAHAT 703
Query: 897 LDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
L +L++ C+ LFVTHY ++ ++ F SV +H+S+L V+ T+L
Sbjct: 704 LRHLVQEIGCLALFVTHYQSLSALELAFPSSVTNHHMSFLLDEGVL-----------TFL 752
Query: 957 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSD 1016
Y+ V G ++ S+G VA+LA +P S +S A+ + +LE RV KR L + ++
Sbjct: 753 YQCVRGAADRSYGLNVAKLADIPQSILSLASEKSKELEECTEHRV---YLKRVLRLLWAE 809
Query: 1017 QEQEAQENMPV 1027
+ E Q+ M +
Sbjct: 810 DQTEVQQGMAM 820
>gi|353237288|emb|CCA69264.1| related to DNA mismatch repair protein [Piriformospora indica DSM
11827]
Length = 1071
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 328/927 (35%), Positives = 490/927 (52%), Gaps = 90/927 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE QV +LK + P LL+ EVGYK+RFFGEDA +A+K LGI +D NF+T SIP +
Sbjct: 201 YTPLELQVKQLKEENPGTLLLFEVGYKYRFFGEDARIASKALGIACFMDRNFLTGSIPVY 260
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
R +H ++L++ G +VG+V QTETAA+K G ++GPF R ++ LYT T E
Sbjct: 261 RKMIHTKKLLSLGHRVGIVGQTETAALKKAGDNRSGPFRRQVTELYTATTF-VDEMESLD 319
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
E+ L+C+ + G G V G+V+V STG+VVY +F+D +R
Sbjct: 320 ENDLFNTGAALLCLAES-------LMGGMGPDDRVGFGLVSVIPSTGEVVYDQFSDVAMR 372
Query: 269 SGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
+ LE L + P ELLL LS TEKML YAG S R+E
Sbjct: 373 TELETRLAHIKPCELLLPATGLSSHTEKMLKHYAGSGS-ARIERI--------------- 416
Query: 328 SLYENMGEDTLSNNED-QNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER 386
ED L + + + P ++++P V ALA +RHL+ +GL
Sbjct: 417 -------EDALHYTDAFEYLHQP--------FNDVLDLPKPVVVALAHAVRHLRAYGLSN 461
Query: 387 IMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
F M L+ANTL LE+ +N ++ S G+L+ ++HT T +GSRLLR+
Sbjct: 462 AFRKTTFFCPFMTRSHMLLNANTLTNLEIFQNQTDYSRKGSLIWRVDHTKTKFGSRLLRQ 521
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
W++ PL ++ L+ R AV +I + + +V+ L +VL
Sbjct: 522 WISKPLVNKRLLEERFQAVEDILNTQSA-----------------ALVK------LRTVL 558
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHS 566
L PD+ +G++RI + +TP E V+ A LQ++ + + +K L S
Sbjct: 559 KGL---PDLTKGLSRIQYGKSTPKEVATVLTA-------LQRVANEFDLIDKPQDAGLKS 608
Query: 567 ALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSA 626
LL ++ T P + + L+ +N A +G+L +L S ++ EV A+ + S
Sbjct: 609 PLLNDILFTL--PRLREPVQQFLNDINVTKAHEGELTDLWRDSE-KYPEVDDAKMLILSI 665
Query: 627 KEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHS 684
+ + + RK L L ++SVSG+ L+E+P KVP NW +V TKK R+H+
Sbjct: 666 ELHMQDHLKEVRKILKRPTLNWVSVSGVDFLVEVPNSEKSKVPENWNRVQGTKKVTRFHT 725
Query: 685 PEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR 744
PE + + E L V A++ F E Y AV LA D L +LA ++
Sbjct: 726 PEARQRISEREQLKETLQAVSVKAFEKFQAEINAEYGLLCDAVNKLAVADALASLALVAT 785
Query: 745 NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGG 804
+ +P V+D E + I GRHP+++ I FVPND L +ITGPNMGG
Sbjct: 786 EDGYTKPQIVEDDE---LEIVKGRHPLIEAISSAPFVPNDIALGRRTNLAMVITGPNMGG 842
Query: 805 KSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASY 864
KS R AL+ IMAQ G +VPA A + + D + TRMGASD IQ+GRSTF+ E++E +
Sbjct: 843 KSSCTRLTALLVIMAQSGCWVPAEHARIPLHDAVLTRMGASDEIQRGRSTFMVEMSETAE 902
Query: 865 ILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTK 923
I+++ T +SLVI+DELGRGT+T DGVAIA A LD+++ +C LF+THYP+I ++ K
Sbjct: 903 IIQSATERSLVILDELGRGTATWDGVAIATAVLDHMVSVIRCKTLFITHYPQIGVELSQK 962
Query: 924 FTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCI 983
+ G V H+ YL G +++ +LY++ GV++ SFG + +LA LP +
Sbjct: 963 YPGLVANAHMGYLEEELADG------RREIHFLYRLQDGVADKSFGVECGRLAGLPEVVL 1016
Query: 984 SRATVIAAKLEAEVSSRVQNRSAKRDL 1010
++A+ +A+ E E + RS +D+
Sbjct: 1017 AQASRKSAEWE-ERERSLHLRSTLKDI 1042
>gi|303276645|ref|XP_003057616.1| DNA mismatch repair protein MSH3 [Micromonas pusilla CCMP1545]
gi|226460273|gb|EEH57567.1| DNA mismatch repair protein MSH3 [Micromonas pusilla CCMP1545]
Length = 1286
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 375/1047 (35%), Positives = 547/1047 (52%), Gaps = 158/1047 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV------------------ 129
K TPLE QV + K +P VLL+IEVGYKF F+GEDA +A+K
Sbjct: 209 KMTPLELQVKKHKADHPGVLLLIEVGYKFHFYGEDAHVASKARSILHTGSLAFNPDTPRR 268
Query: 130 ------------------------LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVG 165
L I+A+ N++TAS+P RL+V+VRRLV G KVG
Sbjct: 269 LSTSTDAFQLHPDVGRFVRNAPKALNIFAYQKGNYLTASVPVPRLHVYVRRLVERGHKVG 328
Query: 166 VVKQTETAAIKAHG---PGKAGPFGRGLSALYTKATLEA--AEDVGGGEDGCGGE----- 215
V++QTETAA+KA G GK G F R L LYTK+TLEA A D GG + G
Sbjct: 329 VIRQTETAALKAGGETDAGKGGLFERKLVGLYTKSTLEAGVAVDASGGTNDKGESVTAAD 388
Query: 216 ---SNYLVCVVDDDGNVGKIRNGVFGD--GFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
S+YL+C+ ++ + + D G R+GV AV+ STGDV++ EF D LR+
Sbjct: 389 GRFSSYLLCIAEE-----PVSSSSSSDEGGGRARIGVAAVDASTGDVLHDEFVDSSLRAE 443
Query: 271 LEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGP---ASNVRVECASRDCFIGGGALAEVM 327
LEA LL ++PAE+LL +PLS T K++ G RVE +R G G A +
Sbjct: 444 LEARLLRVAPAEILLVEPLSTATTKLVKTMYGDDPRGGGARVEAVARGSGYGDGGAAAAV 503
Query: 328 SL----YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
+ + G+ + A +++P ++A+A+ L+QFG
Sbjct: 504 AASIAEFGRDGDGDRDRGATASTSGGSGAAASGAAVAAIDLPSQTLRAVAVAFDWLRQFG 563
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM-NHTLTIYGSR 442
L ++ L +FR + EM LS N ++QLE+LR+ +G+ G+LL +M ++ T GSR
Sbjct: 564 LCGVLALTPAFRPMRARREMNLSPNVMRQLELLRS-IDGAHRGSLLWLMGSNARTPCGSR 622
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT-SESVGQHDEKNSDVTIVEPQFYYI 501
L+RRWV+HPL D+ + RLDAV E+ RT +E G H SD
Sbjct: 623 LVRRWVSHPLTDKRDVERRLDAVDEL-------RTKAEDGGGHGGVLSD----------- 664
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI------DGEY 555
L++ L + D +R + R+FH TATP+E +A + A+ + ++ GE
Sbjct: 665 LAASLKAAHGGGDCERYLARVFHGTATPAELVAGLSAVRDFARLVRNAKAKAAAGRGGEI 724
Query: 556 REKVTSKTLH------SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMI 607
SALL+ + AS +V+ +LLS V+ E A G ++
Sbjct: 725 DAAAADDDDECASLASSALLREYLDAASDASVVHTCDRLLSMVDVENATNGKATAATALL 784
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG----------------MRNLEFMSV 651
+ +F + R + A++ L+ L+ R++L + L +++V
Sbjct: 785 PNATRFPRLESTRADIADAEKALEDLLPTLRQKLIDAGKKEKGGGGGGLALVPRLAYVTV 844
Query: 652 SGITHLIELPANFK-VPLNWAKV--NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+ + +LIELP + VP NWA++ N +KK +RYH PEV+ A L A E +AA
Sbjct: 845 ALVEYLIELPDTLRGVPANWARMSTNKSKKVVRYHPPEVVAAAAALERARERHVAESKAA 904
Query: 709 WDSFLKE-FGGYYAEFQAAVQALAALDCLHALATLSR-NKNFVRPVFVDDHEPVQIHICS 766
W SFL++ G + E +AAV A A LD L + A L+R N + RP F+ D P + +
Sbjct: 905 WASFLRDDAAGNFLELRAAVAAAAGLDALLSFAALARGNAGYARPTFLPDDAPPALRVDR 964
Query: 767 GRHPVLDTILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
GRHP+LD ++ +VPN +L + +ITGPNMGGKSC+IRQ ALI +MAQ GSF
Sbjct: 965 GRHPILDAMMPPGKTYVPNSASLAEDGVRALVITGPNMGGKSCFIRQTALIVVMAQCGSF 1024
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA+SAE+ V+DG++TRMGASD++ G STFLEE++E S IL + +SLV++DELGRGT
Sbjct: 1025 VPAASAEMTVMDGVHTRMGASDNMAMGASTFLEEMSECSSILAAASKKSLVVLDELGRGT 1084
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHVSYL---TSHK 940
+T DG AIA+ATL++L+ + KC+ LFVTHYP +A +I K+ SY+ + +
Sbjct: 1085 ATTDGTAIAHATLEHLVSNAKCLTLFVTHYPSVAKEITAKYPKHCAAAFTSYVRVRRNGR 1144
Query: 941 VMGPMDSKSDQDVT---------------------------YLYKVVPGVSESSFGFKVA 973
V +++ DV +LY + PGV+ SFG VA
Sbjct: 1145 VAARNKNENVDDVEGGPGAGAAAAAEEEEEEEEGEEGDRIEFLYSLTPGVAHRSFGLNVA 1204
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
++A +P + I A A +LE + R
Sbjct: 1205 RMAGVPENIIRLAGRKAKELEEATTRR 1231
>gi|392567582|gb|EIW60757.1| hypothetical protein TRAVEDRAFT_57899 [Trametes versicolor FP-101664
SS1]
Length = 1084
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 327/949 (34%), Positives = 500/949 (52%), Gaps = 77/949 (8%)
Query: 75 PIPTPS---SQTTHN-----KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMA 126
P+ PS SQ T + YTP E QV ELK KYP +LMI+ GYK FF EDA++A
Sbjct: 189 PVAGPSRSKSQKTEEIGPSGQPYTPFELQVRELKAKYPGTVLMIQSGYKMLFFDEDAKIA 248
Query: 127 AKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF 186
+K LG+ NF+TA IP R +VH+++L++ G+KVG+V+QTETAA+K G + F
Sbjct: 249 SKELGMVCFPKRNFLTAMIPLHRRDVHMKKLLSHGYKVGIVEQTETAALKKAGETRNELF 308
Query: 187 GRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLG 246
GR ++ +YT AT +D+ ++ + L+C +++ G G V +
Sbjct: 309 GREVTHMYTAATF--VDDLNSVDELDPNSAPPLMCFLEEP-------KGGMGTDERVTIA 359
Query: 247 VVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKML---LAYAG 302
++A+ STGDVV+ EF D +R+ LE ++ P ELLL + LS TEKM+ ++
Sbjct: 360 MIAISPSTGDVVWDEFEDNHMRTELETRMVHTKPYELLLPSKKLSPATEKMIKHFTEHSH 419
Query: 303 PASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
+R+E S+ A + ++ D N + N+ + I
Sbjct: 420 TEHRMRIERFSKQM-----AYTDAFAILSKFYTDKTHANASEGF------NNGDLMAAIT 468
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
+ V LA ++ +L F + + F + M L+ANTL LE+ N+++
Sbjct: 469 EFSKIVVITLAQSLNYLATFNVADALRETRFFSKFTERTHMLLNANTLTNLEIYVNDTDY 528
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
+ G+L+ I++ T T +G+RLLR WV PL D + R DAV EI S R+
Sbjct: 529 TTKGSLMWILDRTSTKFGARLLRSWVGKPLVDAAALRERTDAVEEIL----SNRSPR--- 581
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
L+ + L R PD+ RG+ RI + TP E +++A
Sbjct: 582 -------------------LTQLRELLRRLPDLARGLCRIQYGKCTPQELAVLLKAFRRV 622
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
H + ++ + LH+ LL ++ S P + ++ V+ AA+QG
Sbjct: 623 STTFTPPHP-AQSQQAAPAAGLHAGLLVGIV--ESLPRLRDPVKEICDAVDFAAAEQGKE 679
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA 662
M +F E+ +Q A+ EL + RK L L++ +G +++E+
Sbjct: 680 -EAMWTDIDRFPELDSLTACIQVAESELMDELKTIRKVLKKPALKYTEWNGEEYVVEIRK 738
Query: 663 NFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGY 719
+ + +P+NW ++STK RYH+PEV L + A E L I R A+ +FL E Y
Sbjct: 739 DERRDIPVNWTLLSSTKFARRYHTPEVRAKLQERAQYKEGLAIEARKAFLTFLAEITDKY 798
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQ-----IHICSGRHPVLDT 774
YA + AV LA DCL +LA ++ + + RP FVD E + I GRHP+++
Sbjct: 799 YALLRDAVNKLAVADCLFSLAQVAAQEGYARPEFVDRKEGEGSENDVLEIVEGRHPMIEA 858
Query: 775 ILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHV 834
+ D FVPN + +IITGPNMGGKS +R AL +MAQ+GS+VPA S +L +
Sbjct: 859 LRTDPFVPNSVRMGGSETRHRIITGPNMGGKSSAVRMTALCAVMAQIGSYVPAKSMKLSL 918
Query: 835 LDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAY 894
LDGI TRMGASD + +GRSTF+ E+ E S IL+ T+++LV++DELGRGTST DG+AIA
Sbjct: 919 LDGILTRMGASDELARGRSTFMVEMQETSDILQMATSKTLVVLDELGRGTSTFDGMAIAG 978
Query: 895 ATLDYLLEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDV 953
A L +L++ KC LF+THYP++A D++ F VG H+ + +V G ++V
Sbjct: 979 AVLQHLVQEVKCKTLFITHYPQVATDLERMFPSDVGNMHMGFTEETRVDG------TREV 1032
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
T+LY++ PG+ SFG + A+LA LP + + AT AA ++ + R++
Sbjct: 1033 TFLYRLEPGLVTESFGVECARLAGLPETVLQVATTKAANMKIVIEERIK 1081
>gi|412985886|emb|CCO17086.1| DNA mismatch repair protein Msh3 [Bathycoccus prasinos]
Length = 1118
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 370/1033 (35%), Positives = 512/1033 (49%), Gaps = 179/1033 (17%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS 144
+KK TPLE QV + K KYP VLL+ EVGYKF F+G+DA AA+ L ++A+ ++ AS
Sbjct: 127 RDKKLTPLEAQVRDFKRKYPSVLLLFEVGYKFHFYGKDARKAAETLNVFAYPGKTWLQAS 186
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P RL V+VRRLVNAG KVGVV+QTETAA+KA G K F R L ALYTKAT++A
Sbjct: 187 GPVHRLAVYVRRLVNAGHKVGVVRQTETAALKAEGSTKGSVFTRELVALYTKATMDAGVS 246
Query: 205 VGG-----------------------GEDGCGGE-------------------------- 215
+ +G G E
Sbjct: 247 IAAEPAHTNNESDEAQKAVDIIENKTDREGEGDEDLQGVVITNNHRKSSTTTSNITADEQ 306
Query: 216 ----SNYLVCVVDDD----GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
SNYL+C+ ++ GN +I +VA+E S G++ Y F D
Sbjct: 307 QHRLSNYLLCISEEKKSERGNKDEI-------------ALVAIETSVGNIYYSHFEDDSS 353
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTE-------KMLLAYAGPASNVRVECASRDCFIGG 320
RS LE+ LL +SP E+L + E K L++ P + RVE ++
Sbjct: 354 RSRLESALLKISPCEILFAGGGGGEEESSSSKETKRLVSALFP--DARVEQSTSSVSSLS 411
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A + E G SNN E + +P L + LA +L
Sbjct: 412 KA-----EIDEYFG----SNNS----------------EKVAGLPRLLIATLAAAREYLV 446
Query: 381 QFGLERIMCLGASFRSLSG-SMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
F LE ++ L + + L EM LS N ++QLE+ RN+ +GS G+LL +++H +
Sbjct: 447 PFKLENVLKLSKAIKPLDDFQSEMILSPNAIRQLEIFRNSDDGSFTGSLLWLIDHAKSKA 506
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSR L RWV+ PL DR I RL A+ E++ S ++ P
Sbjct: 507 GSRELSRWVSRPLRDRAEIENRLSAI----ETLRSVNSA-----------------PTSV 545
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK---QLQQLHIDGEYR 556
L + L +PD++R + R H ATP+EF+A MQ L G ++Q + +
Sbjct: 546 LALEKLEKILRTAPDVERVVARAHHLNATPAEFVAAMQFFLSFGAACVEMQHSALLNQND 605
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG----DLLNLMIISN-- 610
EK L SA L A + A+ A L+ N A + G + L + N
Sbjct: 606 EKSPLNELLSACADEATLRACTKAL---NALDLTVANSRAGNLGCSRDAYVGLFLRENED 662
Query: 611 --GQFSEVARARKAVQSAKEELDSLINMCRKQL-----GMRNLEFMSV---SGITHLIEL 660
QF E+ RA ++ +K +D+L+ Q+ G + L + SV SG +LIE+
Sbjct: 663 NQKQFPEMFRAHDNLEKSKATMDALLPDLAAQIPGIIKGAK-LSYTSVGGASGAEYLIEV 721
Query: 661 PANFKVPLNWAKV--NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG 718
K P +W KV N +KK IRYH P VL + L +E L + C AW SFLKEF
Sbjct: 722 GDKLKPPNDWIKVSANKSKKVIRYHPPIVLENMKSLDANSERLALACEDAWKSFLKEFSR 781
Query: 719 Y-YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHE-----PVQIHICSGRHPVL 772
Y E + A +A A +D L+ALA LS N + RP F + E +I I GRHP L
Sbjct: 782 VSYGECRQAAKAAAKIDALNALAILSMNDGYCRPEFFKEEEENEDGTARIEIVEGRHPTL 841
Query: 773 DTILLDNFVPNDTNLHAEREYCQ-------------IITGPNMGGKSCYIRQVALIGIMA 819
D ++D FVPN +L + + I+TGPNMGGKSC+ RQVALI I+A
Sbjct: 842 DAKMVDKFVPNSASLGGAQSSGESRNDSTRRRRRAMILTGPNMGGKSCFARQVALIAILA 901
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
+GSFVPA S L VLDGIYTR GA+D++ G+STF +E++E S IL++CT +SLV++DE
Sbjct: 902 HIGSFVPAKSCRLSVLDGIYTRAGAADNLALGQSTFFQEMSETSAILKSCTKKSLVVLDE 961
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
LGRGTST DG+A+A ATL L+E +C +FVTH+ +A +F S SH
Sbjct: 962 LGRGTSTTDGIALATATLRMLVEKVQCATVFVTHFSNLA---KQFKESNADEVFCCFPSH 1018
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
M D K + + +LY + GV+ SFG VA +A +P + A V + E E SS
Sbjct: 1019 --MKTNDEKDSKRIAFLYTLEEGVAHRSFGLNVASMAGIPEKVLEVAEVKSLAFE-EKSS 1075
Query: 1000 RVQNRSAKRDLLV 1012
R +SA D +V
Sbjct: 1076 R---KSAGSDEVV 1085
>gi|299753991|ref|XP_001833680.2| DNA mismatch repair protein MSH3 [Coprinopsis cinerea okayama7#130]
gi|298410557|gb|EAU88225.2| DNA mismatch repair protein MSH3 [Coprinopsis cinerea okayama7#130]
Length = 1096
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 336/984 (34%), Positives = 515/984 (52%), Gaps = 88/984 (8%)
Query: 54 VSSLFPPKTPK--KPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIE 111
+ LF K+ K K K + T P+ + K YTPLE QV L + P LLM+E
Sbjct: 153 LQELFSNKSKKVTKGKGTMITKKPLKKAAEIGPSGKAYTPLELQVRRLIQENPGTLLMVE 212
Query: 112 VGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTE 171
VGYK++F+G+DA+ AA LG+ A+ D NFM ASIP R ++++++L++ G +VG+V Q E
Sbjct: 213 VGYKYKFYGKDAKTAATALGMAAYRDRNFMVASIPAHRRDIYLKKLLSLGHRVGIVNQIE 272
Query: 172 TAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDD--DGNV 229
TAA+K G K+GPF R L+ LYT AT + + +D ++C++++ D N
Sbjct: 273 TAALKKVGDNKSGPFERKLTHLYTAATY--VDQLNSVDDSERYTPPPVMCIIEEWKDKNP 330
Query: 230 GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP- 288
G + G++++ +TGDVV+ +F D +R LE L L PAE+L QP
Sbjct: 331 G-----------NTSFGIISICPATGDVVWDDFEDKAMRIELETRLSHLQPAEIL--QPR 377
Query: 289 --LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNM 346
LS T+ +L ++G + N A V Y ++ ++
Sbjct: 378 KGLSDPTKTILTDFSGSSGNAIRHEYFDQPMTYSDAFEVVTEFY---------TDKSKSG 428
Query: 347 DVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLS 406
E + I + P V ALA I+H+ FG+ F + M L
Sbjct: 429 AASESFRSGQLMAAITDFPKSVVVALAHAIKHMSAFGMADAFLETRFFSKFATRAHMLLG 488
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
ANTL LE+ RN ++G+ G+L+ I++ T T +G+RLLR WV HPL D+ ++ R+DAV
Sbjct: 489 ANTLSNLEIYRNETDGTAKGSLIEILDRTKTKFGARLLRNWVGHPLVDKRILQERVDAVQ 548
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
EI ES +SE + +L VL L PD+ +G++RI +
Sbjct: 549 EIIES-----SSERL------------------MVLRDVLKQL---PDLAKGLSRIQYGQ 582
Query: 527 ATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
TP E AIL DG+ ++ S+LL +I P +
Sbjct: 583 CTPPEL-----AILLPAFNKIATAFDGDDISDASAVGFKSSLLNEIIFVL--PKLKEPVQ 635
Query: 587 KLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
KLL +N A + D + + ++ ++A A A+Q+ + EL+ + G+
Sbjct: 636 KLLRDINLRKATE-DKKDSLWNDFDKYPDLADADLALQAIEMELNEELKAGWS--GINTF 692
Query: 647 EFM------SVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALAN 698
S +T L+E+ K +P W ++T+ RY P V L + A
Sbjct: 693 AHFPAHTVPSTKTVTCLVEVKKKDKRPIPETWIVHSTTRTLARYQPPSVHAKLQEKAQMK 752
Query: 699 EELTIVCRAAWDSFLKEFG-GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
E L AA+ SFL++ YY F+ AV LA DCL +LA ++ +N+VRP FV++
Sbjct: 753 ERLEAAANAAFQSFLQDIADNYYGLFRDAVNKLAIADCLFSLAHVALQENYVRPEFVEED 812
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
I I GRHP+++ + ++PN + ++ +IITGPNMGGKS +R +ALI I
Sbjct: 813 ---VIEIVEGRHPMIERLRDTPYIPNSICMGGKKPRSKIITGPNMGGKSSCVRTIALIAI 869
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MAQ+GS+VPA+S + ++D + TRMGASD I +G+STF+ E++E IL T +SLVI+
Sbjct: 870 MAQIGSYVPANSVRMKLMDSVLTRMGASDDITRGKSTFMVEMSETREILDAATDRSLVIL 929
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD-IKTKFTGSVGTYHVSYL 936
DELGRGTST DG+AIA ATL YL+E K+C LF+THYP +A ++ +F + H++Y
Sbjct: 930 DELGRGTSTFDGMAIADATLHYLVEAKRCKTLFITHYPMVATRLQKRFPSDLENLHMAYS 989
Query: 937 TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
TS ++ G + +T+LY + G++ SFG + +LA LP + + A+ + +L+ E
Sbjct: 990 TSVQIDG------TRTITFLYNLTSGLAPESFGIECGRLAGLPENLLRIASQRSDQLQKE 1043
Query: 997 VSSRV-QNRSAKR-DLLVKLSDQE 1018
V R+ +NR K L+ +LS E
Sbjct: 1044 VQKRIARNRIRKALQLMRQLSRSE 1067
>gi|426200534|gb|EKV50458.1| hypothetical protein AGABI2DRAFT_141320 [Agaricus bisporus var.
bisporus H97]
Length = 1124
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 327/932 (35%), Positives = 492/932 (52%), Gaps = 85/932 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE QV++LK LLMIEVGYK++FFG+DA++AAK LG+ A+ D NF+ ASIPT
Sbjct: 262 YTPLELQVLKLKEDNQGTLLMIEVGYKYKFFGDDAKVAAKELGMVAYYDRNFLVASIPTE 321
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
RLNVH+++L+ G+KVGVV Q ETAA+K + PF R L+ LYT AT +D+
Sbjct: 322 RLNVHLKKLLARGYKVGVVNQVETAALKKVSDNRNAPFDRKLTCLYTAATY--VDDMMAE 379
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D +C++++ DV + ++ + STGDVV+ +F D +R
Sbjct: 380 DDSEFYSPPPFMCLIEEPKK---------NSPGDVNISIIIICPSTGDVVWDDFEDSLMR 430
Query: 269 SGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASN---VRVECASRDCFIGGGALA 324
LE L+ P ELLL + +S+ T KML + G + +RVE ++ A +
Sbjct: 431 IELETRLVHARPTELLLPERGVSEATTKMLQYFTGDTTTDHRIRVEHI-KEVLPYTDAFS 489
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
V Y + +++ E + + P V ALA I++L FG+
Sbjct: 490 AVSKFYTDKKHAAVAS---------ESFKSGKLMAEVTAFPQRVVIALAHVIKYLSNFGI 540
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
+ F + M L+ANTL LE+ +N ++G+ G+LL +++ T T +G+RLL
Sbjct: 541 ADALLETKFFSEFTTRTHMLLAANTLINLEIYKNTTDGTAKGSLLEVLDKTQTKFGARLL 600
Query: 445 RRWVTHPLCDRN-LISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
+ W+ PL DRN + R+DAV EI ++SD +E +L
Sbjct: 601 KSWIGRPLVDRNSALQERVDAVREI------------------RDSDSEKLE-----MLR 637
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI--DGEYREKVTS 561
L L PD+ RG+ RI + TP E ++ A G + D + V +
Sbjct: 638 RTLKGL---PDLARGLCRIQYGQCTPKELATILLAFRKIGDAFEGFETPKDVGFESHVLN 694
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
++S R+ + L+ ++ E A +G LM I F + A
Sbjct: 695 DVIYSLPKLRIPIKG-----------LIDSIRIEQAVEGKK-ELMWIEPDNFPGLVDAAV 742
Query: 622 AVQSAKEELDSLINM--CRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKVNSTK 677
+Q+A+ EL + RKQL + +L++ S +L+E+ AN +P NW + T
Sbjct: 743 LLQTAEIELAEELKKYSVRKQLRIPSLQWASHLNDEYLVEIKRANSPPIPENWIMHSRTA 802
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG-YYAEFQAAVQALAALDCL 736
K +RY P V + + A E L + A+ FL + Y + V LA DCL
Sbjct: 803 KLVRYQPPSVQSKVQARARYQEMLQAESQKAYKEFLLDISNDCYGMLRDTVNKLAVADCL 862
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQI 796
+L ++ + ++V+PVF +D + I GRHP+++++L FVPN + R ++
Sbjct: 863 SSLGRVALDSDYVKPVFTEDD---SLEIVEGRHPMIESVLHTPFVPNSVTMGYGRPRSKV 919
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNMGGKS ++R VAL+ +MAQVGS VPA S + + D I TRMGASD + +GRSTF+
Sbjct: 920 ITGPNMGGKSSFVRMVALVVLMAQVGSHVPAKSVRMGLHDSILTRMGASDDLAKGRSTFM 979
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
E++E S IL + +SLVI+DELGRGTST DG+AIA A L +L+EH + LF+THYP
Sbjct: 980 VEMSETSDILHTASPRSLVILDELGRGTSTFDGMAIAGAVLQHLVEHTRSKTLFITHYPL 1039
Query: 917 IA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD--QDVTYLYKVVPGVSESSFGFKVA 973
A +I+ K+ V H+ Y S D++ D +D+T+LYKV PG++ SFG + A
Sbjct: 1040 TASEIERKYPKDVENIHMGYYVS-------DTRIDGTRDITFLYKVEPGITTESFGIECA 1092
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSRV-QNR 1004
+LAQLP + AT A + + R+ QN+
Sbjct: 1093 RLAQLPAPLLEAATTYAQDFQHKTEERIRQNK 1124
>gi|388855601|emb|CCF50824.1| related to DNA mismatch repair protein [Ustilago hordei]
Length = 1188
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 336/965 (34%), Positives = 518/965 (53%), Gaps = 111/965 (11%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q++ELK+ +P VLL+IEVGYK +F+GEDA +A+K L I + N +TA IP
Sbjct: 233 YTPLEKQILELKSLHPGVLLIIEVGYKLKFYGEDARIASKELNIMCFPERNLLTAMIPVH 292
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT----LEAAED 204
RL++HV++L++AG KVGVV+Q ET A+KA PF R L+ALYT T L +++D
Sbjct: 293 RLHIHVKKLISAGHKVGVVRQIETRALKAASKNAYTPFVRKLTALYTAGTWIDDLASSDD 352
Query: 205 VGGG---EDGCGGESNYLVCVVD--DDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
+G G +G + L+ +V+ + GN + R V +G+V+VE++TG + Y
Sbjct: 353 MGAGLGIGEGYTNQPKSLMAIVEQSEGGNGAEDR---------VSIGLVSVEVNTGFLTY 403
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEK----MLLAYAGPASNVRVE-CASR 314
+F+DG RS LE + L+PAE+L+G+ LSK TEK +L + A VR+E S+
Sbjct: 404 DQFSDGHARSELETRIAHLAPAEVLVGKGLSKPTEKIIGFLLGSGAEEGGGVRIERMESK 463
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE---------QGNHRSA--IEGIMN 363
+ A V Y + G DT +E + D P GN +++ + I+
Sbjct: 464 PDY--NMAFQAVTQFYRDRGIDT--EDEVRENDTPSAASPADGAGDGNGKASPFMSLILT 519
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P L++ AL+ I HL+ F LE I L +F S S M L+A+TL LE+ R + S
Sbjct: 520 LPHLSLIALSQIITHLQAFQLESICTLSTNFASFSSRTTMLLNASTLANLEIFRTSDEQS 579
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
E G+L+ +++ T G RLLR+WV+ PL D + + RLDAV + E
Sbjct: 580 EKGSLIWLLDKCKTAMGRRLLRKWVSRPLTDISALEERLDAVQALVEGKS---------- 629
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
Y+L S+ L PD++RG+ R+ + ATP+E V+
Sbjct: 630 ----------------YVLRSLPNLLHGLPDLERGLARMTYGRATPTELATVL------- 666
Query: 544 KQLQQLHIDGEYR-EKVTSKTLHSALLKRLILTAS-SPAVIGKAAKLLSTVNKEAADQGD 601
L + EYR E+ + L S LL IL+ + A + K +S A ++ D
Sbjct: 667 --LGLNRVTQEYRPEEDEAWNLSSTLLHHHILSLTQGKAAVEKYINQISIKEARANNKPD 724
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
L + + A+ + + EL + RK L +LEF++V+G+ +L+E+
Sbjct: 725 LFP----DPDLYPAIQAAKDNIAIIEGELREHLREIRKVLHRPSLEFVTVAGVDYLVEVR 780
Query: 662 A--NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GG 718
KVP W +V++TK +R+H+P+VL + + E L A+ F+K G
Sbjct: 781 VADAKKVPAEWLRVSATKSMVRFHTPQVLQMVKRRGQWKETLDAEADLAFKGFIKGMCGQ 840
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV-----QIHICSGRHPVLD 773
Y + V +L+ LD L +LA L+ + + RP F D + +I + RHP+L+
Sbjct: 841 EYVVLRNVVNSLSVLDVLVSLAQLAASSGYSRPKFSQDSKGEEEEEPKIEVSGMRHPILE 900
Query: 774 TILLDNFVPNDTNLHAE--REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
+ ++PND L + ++TG NMGGKS +R + L+ I+AQ+GSFV A+SA
Sbjct: 901 VVSPLPYIPNDLTLSSADPNSRAMLLTGCNMGGKSSIVRTLGLLVILAQIGSFVAATSAR 960
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
L + D ++ RMGA DS G+STF+ E++E + ILR+ T +SLVI+DELGRGTST+DG+
Sbjct: 961 LSIHDSVFVRMGARDSPFSGKSTFMIEVSETAEILRSITPRSLVILDELGRGTSTYDGLC 1020
Query: 892 IAYATLDYLLEHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYL-TSHKVMGPMDSK 948
IA L+YLL K M V+F++HY ++ +++ K+ G VG +H+ +L TS D
Sbjct: 1021 IASGVLEYLLGLDKRMPNVVFISHYFQLGELEGKWKGKVGNWHMGFLETSTTDFEDFDGL 1080
Query: 949 SDQD-------------------VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVI 989
SD + + +LYK+ G++ SFG A+LA LP + A+ I
Sbjct: 1081 SDDEPAASGKSGGVGGGGGGKGQIEFLYKLRRGIASKSFGIHCARLADLPRVILDSASRI 1140
Query: 990 AAKLE 994
+A+LE
Sbjct: 1141 SAELE 1145
>gi|400602694|gb|EJP70296.1| MutS domain V [Beauveria bassiana ARSEF 2860]
Length = 1095
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 319/941 (33%), Positives = 500/941 (53%), Gaps = 93/941 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D +L++EVGYKFRFFGEDA +AAK L I AH
Sbjct: 188 TPMELQFLEIKRKHLDTILIVEVGYKFRFFGEDARIAAKELSIVCIPGKMRYDEHPSEAH 247
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH RRLV AG KVGVV+Q ETAA+K G + PF R L+ LYT
Sbjct: 248 LD-RFASASIPVHRLPVHARRLVAAGHKVGVVRQVETAALKKVGDNRNAPFTRKLTNLYT 306
Query: 196 KAT-LEAAEDV-----GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGV 247
K T ++ D+ GG GG YL+C+ + G G D V +G+
Sbjct: 307 KGTYIDENGDLEQTTTGGNASSSGG---YLLCITESKAK---------GSGTDEKVDVGI 354
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
+AV+ +TGD++Y F+DGF+RS +E LL +SP E ++ L+K T+K++ AG ++NV
Sbjct: 355 LAVQPATGDIIYDTFDDGFMRSEIETRLLHISPCEFVIVGDLTKTTDKLIQHLAGSSTNV 414
Query: 308 -----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
RVE R + A + V Y ++ ++ +Q+ + +E ++
Sbjct: 415 FGDRSRVERVPRTQTMAAEAASHVTQFYAEKLKEASNSQNEQSSSL---------LEKVL 465
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
+P+ L+ I HL ++GLE I L F S S M ++ TL+ LEV RN+++
Sbjct: 466 QLPEPVTICLSAMITHLTEYGLEHIFDLTKHFESFSTRSHMLVNGTTLESLEVYRNSTDH 525
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
+E G+L ++ T T +G RLLR+W+ PL ++ + RL AV E+
Sbjct: 526 TERGSLFWAIDKTRTRFGRRLLRKWIGRPLLNQERLEERLAAVQEL-------------- 571
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
HD+++ T +L+ T D++R + RI++ T E ++V+QA
Sbjct: 572 -HDKQS---TAPVDDLERLLAKTRT------DLERSLIRIYYGKCTRPELLSVLQA---- 617
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
LQQ+ ++ + LL +L + P ++ L +N +AA + D
Sbjct: 618 ---LQQISSHYVRVKRPQDVGFDAPLLVDAVL--ALPQILDLVVSYLDRINLDAARKDDK 672
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELP 661
Q ++ + + + +LD + +L + +++++V+GI LIE+P
Sbjct: 673 YGFFR-DEHQTDDMQDHQMGIAHVEHQLDQHRAVAADKLQRKKPVDYVTVAGIEFLIEVP 731
Query: 662 AN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
+VP +WAK++ TKK R+H+P+V+ + + E L C A+ L
Sbjct: 732 NTDIKRVPASWAKISGTKKVSRFHTPDVVQLIAERDQHREALAAACDTAFKDLLASLAAA 791
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
Y + AV ALA LDCL +LA ++ + RP + P + I +GRHP+ + L
Sbjct: 792 YQPLRDAVSALATLDCLLSLARVAAQPGYTRPRLLPVSAPPTVSITNGRHPMAEQTLPGG 851
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
++P L ++TGPNMGGKS ++R +AL+ ++AQVGSFVPA + E+ + D ++
Sbjct: 852 YIPFSATLAHPAPLAHLVTGPNMGGKSSFVRALALLVLLAQVGSFVPADALEMTLCDAVH 911
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR GA D++ STF+ E++E + ILR T +SLVI+DELGRGTSTHDG AIA+A L +
Sbjct: 912 TRAGARDNLFASESTFMVEVSETARILRAATPRSLVILDELGRGTSTHDGAAIAHAVLHH 971
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
++ +C+ LF+THY +A + G + H+ + GP D+++T+LY+V
Sbjct: 972 VVTETRCLTLFITHYQNLARVADGLEG-LTNVHMKFKADK---GP---DGDEEITFLYEV 1024
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA +P I A + +E+E+ R
Sbjct: 1025 GEGVAHRSYGLNVARLAHIPKKVIGVAAEKSNAMESEMRMR 1065
>gi|346321824|gb|EGX91423.1| DNA mismatch repair protein Msh3 [Cordyceps militaris CM01]
Length = 1099
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 331/957 (34%), Positives = 506/957 (52%), Gaps = 95/957 (9%)
Query: 75 PIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY- 133
P P + + K TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 177 PAPKSKKKGSKTGKLTPMEIQFLDIKRKHLDTILIVEVGYKFRFFGEDARVAAKELSIVC 236
Query: 134 -------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
AHLD F +ASIP RL VH RRLV AG KVGVV+Q ETAA+K G
Sbjct: 237 IPGKMRYDEHPSEAHLD-RFASASIPVHRLPVHARRLVAAGHKVGVVRQVETAALKKVGD 295
Query: 181 GKAGPFGRGLSALYTKAT-LEAAEDV-----GGGEDGCGGESNYLVCVVDDDGNVGKIRN 234
+ PF R L+ LYTK T ++ D+ GG GG YL+C+ +
Sbjct: 296 NRNAPFTRKLTNLYTKGTYIDENGDLEQSTQGGNTSSSGG---YLLCLTESKAK------ 346
Query: 235 GVFGDGFD--VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQ 292
G G D V +G++AV+ +TGD++Y F DGF+RS +E LL +SP E ++ L+K
Sbjct: 347 ---GAGTDEKVDVGILAVQPATGDIIYDTFEDGFMRSEIETRLLHISPCEFVIVGDLTKA 403
Query: 293 TEKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLY-ENMGEDTLSNNEDQNM 346
T+K++ AG ++NV RVE R + A + V Y E M E T S NE
Sbjct: 404 TDKLIQHLAGSSTNVFGDRSRVERVPRTPTMAAEAASHVTQFYAEKMKEATSSQNEQSA- 462
Query: 347 DVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLS 406
S +E ++ +P+ L+ + HL ++GLE I L F S S M ++
Sbjct: 463 ---------SLLEKVLRLPEAVTICLSAMMTHLTEYGLEHIFDLTKYFESFSTRAHMLVN 513
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TL+ LEV RN ++ +E G+L ++ TLT +G RLLR+W+ PL + + ARL AV
Sbjct: 514 GTTLESLEVYRNATDHAERGSLFWAIDKTLTRFGRRLLRKWLGRPLLHQADLEARLVAVK 573
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
E+ + R++ +VG +L+ T D++R + RI++
Sbjct: 574 ELHDK----RSTAAVGG--------------LERLLAKTRT------DLERCLVRIYYGK 609
Query: 527 ATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
T E +A +QA+ + + + LL +L + P ++G
Sbjct: 610 CTRPELLAALQALQQVASHYASVKTPAD-------AGFDAPLLTDAVL--ALPQILGLVV 660
Query: 587 KLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN- 645
L +N +AA + D + Q ++ + + + +LD +QL +
Sbjct: 661 SHLERINLDAARKDDKYGFFRDEH-QTEDMEDHQMGIAHVEHQLDQHRAAAAEQLKHKKP 719
Query: 646 LEFMSVSGITHLIELP-ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+++++V+GI LIE+P ++ K VP +WAK++ TKK R+H+P V+ + + E L
Sbjct: 720 VDYVTVAGIEFLIEVPNSDIKHVPASWAKISGTKKVSRFHTPAVVQLVAERDQHREALAA 779
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIH 763
C AA+ + L Y + AV ALA LDCL +L+ ++ + P F+ P I
Sbjct: 780 ACDAAFRALLASVAAAYQPLRDAVSALATLDCLLSLSKVAAQPGYTCPEFLPSSAPPTIA 839
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
I GRHP+ + L ++P T L ++TGPNMGGKS ++R +ALI ++AQVGS
Sbjct: 840 ITGGRHPMAEQTLAGGYIPFSTTLAHPTPRAHLVTGPNMGGKSSFVRALALIVLLAQVGS 899
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
FVPA + + + D I+TR GA D++ STF+ E++E + ILR T +SLVI+DELGRG
Sbjct: 900 FVPADALRMTLCDAIHTRTGARDNLFASESTFMVEVSETARILRAATPRSLVILDELGRG 959
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
TSTHDG AIA A L +++ +C+ LF+THY +A + G + H+ + G
Sbjct: 960 TSTHDGAAIAQAVLHHVVAETRCLTLFITHYQNLARVADGLDG-LTNVHMKFKAD---TG 1015
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
P ++++T+LY+V GV+ S+G VA+LA +P I A ++ +E+E+ +R
Sbjct: 1016 P---DGEEEITFLYEVGEGVAHRSYGLNVARLAHIPKKVIDVAAERSSAMESEMRTR 1069
>gi|135075|sp|P26359.1|MSH3_SCHPO RecName: Full=DNA mismatch repair protein msh3; AltName:
Full=Mating-type switching protein swi4; AltName:
Full=MutS protein homolog 3
gi|5113|emb|CAA43603.1| Swi4 [Schizosaccharomyces pombe]
Length = 993
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 305/970 (31%), Positives = 494/970 (50%), Gaps = 135/970 (13%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S T +TPLEQQ +ELK Y + +L IEVGYKFRFFG+DA++A++VLGI + +HN
Sbjct: 94 SKPTKQKSVFTPLEQQYLELKKNYQETILAIEVGYKFRFFGKDAKIASEVLGISCYFEHN 153
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
F+ AS+P++R++ H+ RL+N G KV VV+QTETAA+K+ + F R ++ + TK T
Sbjct: 154 FLNASVPSYRIDYHLERLINFGLKVAVVRQTETAALKSTSSSRNTLFDRRVARVLTKGTT 213
Query: 200 --EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
++ + G S +++CV D+ + K ++G V++G++A+++S+G
Sbjct: 214 LDDSFFRFEQTQHGTLQASQFILCVADN-VDKSKAKSG------RVQVGLIAIQLSSGTT 266
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN----VRVECA- 312
VY F D FLRS L+ L P EL+ LS ++ +L Y VRV+ A
Sbjct: 267 VYDHFQDDFLRSELQTRLSHFQPCELIYSNKLSSESVALLNHYVSTEKTCGRVVRVQHAV 326
Query: 313 ---------------SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA 357
S C + G + E+
Sbjct: 327 QQDVKLALENLQDFFSSKCIMSGSKIIEL------------------------------H 356
Query: 358 IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR 417
+E + ++ L++ L + I +L +F LE + ++ M LS L+ LE+
Sbjct: 357 MEKVKSLHSLSIICLDMAISYLMEFSLEDLFVASNFYQPFDSISSMVLSKQALEGLELFV 416
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N ++ + G+L +++ T T +G R+L+RW+ PL D+ I RLDAV E+A +
Sbjct: 417 NQTDHTPVGSLFWVLDRTYTRFGQRMLQRWLQKPLVDKENIIERLDAVEELAFN------ 470
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
NS V + Y R PD+++G++RI+++ F
Sbjct: 471 ---------SNSQVQAIRKMLY-----------RLPDLEKGLSRIYYQRG----FYKAAS 506
Query: 538 AILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA 597
A K + SALL+RLI P++ L +++ A
Sbjct: 507 AF-----------------SKNSYSCFKSALLRRLI--QQLPSISSIIDHFLGMFDQKEA 547
Query: 598 DQGDLLNLMI-ISNGQFSE------------VARARKAVQSAKEELDSLINMCRKQLGMR 644
+ + +++ I N SE + + ++ + E+D + R L
Sbjct: 548 ENNNKVDMFKDIDNFDLSEEPNDVDYELAQEIRELKMSILMVRTEMDFHLQELRDYLEYP 607
Query: 645 NLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
NLEF + IE+ K +P +W K++ST+ R+H+P++ + L +L+ E LTI
Sbjct: 608 NLEFSIWGNVKFCIEVSKGCKKIPPDWIKLSSTRSLFRFHTPKIQSLLIELSSHEENLTI 667
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIH 763
+ SFL +Y E + L LDCL + A +S + RP F D ++
Sbjct: 668 SSEKIYRSFLSRISEHYNELRNVTTVLGTLDCLISFARISSQSGYTRPEFSDK----ELL 723
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
I RHP+++ + +FVPN +L ++ C +ITGPNMGGKS +++Q+AL IMAQ G
Sbjct: 724 IHESRHPMIELLSDKSFVPNHIHLSSDGVRCLLITGPNMGGKSSFVKQLALSAIMAQSGC 783
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
FVPA SA L + D I RMG+SD++ STF+ E+ E +L T +S+VI+DELGRG
Sbjct: 784 FVPAKSALLPIFDSILIRMGSSDNLSVNMSTFMVEMLETKEVLSKATEKSMVIIDELGRG 843
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
TST DG AI+YA L YL ++ K +LFVTH+P + ++ +F G + +H+ YL S +
Sbjct: 844 TSTIDGEAISYAVLHYLNQYIKSYLLFVTHFPSLGILERRFEGQLRCFHMGYLKSKE--- 900
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++ Q +++LYK+VPGV+ S+G VA++A +P S +SRAT I+ E ++
Sbjct: 901 DFETSVSQSISFLYKLVPGVASKSYGLNVARMAGIPFSILSRATEISENYEK------KH 954
Query: 1004 RSAKRDLLVK 1013
R+A++++ ++
Sbjct: 955 RNARKNVFIR 964
>gi|213403790|ref|XP_002172667.1| mating-type switching protein swi4 [Schizosaccharomyces japonicus
yFS275]
gi|212000714|gb|EEB06374.1| mating-type switching protein swi4 [Schizosaccharomyces japonicus
yFS275]
Length = 978
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 327/1002 (32%), Positives = 509/1002 (50%), Gaps = 103/1002 (10%)
Query: 33 QQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPL 92
+Q+PP ++A S K+K SS T KK + S NP PS T KYTPL
Sbjct: 22 EQSPPNALSAKKS--ETKKKRPSSELKRSTRKK-RTSDVERNPSRPPSIGHT---KYTPL 75
Query: 93 EQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNV 152
E+Q + LK +YPD +L +EVGYK+RFFGEDA + +L I +L HNFM ASIP FR +
Sbjct: 76 EEQYICLKRRYPDTILAVEVGYKYRFFGEDARTVSSILHIGCYLSHNFMNASIPNFRADF 135
Query: 153 HVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL--------EAAED 204
H++RL++AG KVGVV+QTETAA+K+ K+ F R ++ +YT+ T EA
Sbjct: 136 HLQRLIHAGLKVGVVRQTETAALKSQSTTKSKIFERDVTEVYTRGTYLAPVPSVREAPTQ 195
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+D C ++CV + + R G G V G+VAV G+VVY EF D
Sbjct: 196 GDFTQDSC------ILCVTE------QPRGGT-GVNEKVLFGIVAVNPVDGNVVYDEFED 242
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
FLR L+ L P EL+ S+ + + +Y + +D G+L
Sbjct: 243 SFLRGELQTRFSHLHPCELIYTPDFSQTSSTCIESYK--------KTEEKD-----GSLI 289
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAI-----EGIMNMPDLAVQALALTIRHL 379
L + N +D + G+ + ++ I+N+P L + L+L I ++
Sbjct: 290 WTQELKGITPDAAFVNIKD--FYCAKFGHVKHSLLDLHLTKIINLPKLVLVCLSLMIDYM 347
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+F +E I + +F+ S M LS NTL+ LEV RN ++ S G+L ++HT T +
Sbjct: 348 TEFSMENIFTMTQNFQDFRSSNTMLLSNNTLKNLEVFRNLTDYSIVGSLYWAVDHTYTRF 407
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G R+LR W+ PL ++ I R +AV E+A + S SV +
Sbjct: 408 GQRMLRAWIQRPLLNKEEIIKRQEAVGELA-----FSQSASVER---------------- 446
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
+ L R PD+++G+++I+++ A+P+E + +++
Sbjct: 447 -----LRHLLWRLPDLEKGLSKIYYKRASPAELLIILRGFYSLSSAFY----------GA 491
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI------------ 607
T HS L LI P +LLS+++ + A + + + L
Sbjct: 492 TKTPFHSTYLNMLI--GVFPQAYDFVDELLSSIHPDEAQKNNKIGLWTDDKELLSSDSSL 549
Query: 608 -ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK- 665
N S++ + A+ A+ +L + +K LE+ + I + +EL K
Sbjct: 550 SQENTLKSQIREHKMAIIMAQADLQVHLEELQKLFNYPELEYKTWGNIEYCVELSRGCKT 609
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP +W K+NST + RYHSP++ + ++ E L + + FL Y + +
Sbjct: 610 VPTDWIKLNSTARLARYHSPKISRTVLEINQHRESLQALSNERYMEFLDCILRDYEKLRN 669
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDT 785
V A A+LDCL +LA ++ +V+P F DD + + RHP+++ +L +V ND
Sbjct: 670 IVSAAASLDCLMSLAKVAAQPGYVKPEFTDD----KFDLLGCRHPMVELLLERPYVSNDI 725
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L + +ITGPNMGGKS IRQVALI I+AQ+GSFVPA SA L +LD I TRM
Sbjct: 726 CLQRDGLRALLITGPNMGGKSSIIRQVALISILAQLGSFVPAKSARLPMLDKILTRMSFH 785
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D + +STF+ E+NE +LR+ T +SL++ DELGRGTST DG AI+YA ++YLL K
Sbjct: 786 DDMLNKKSTFMIEMNETQRVLRDATDRSLLVFDELGRGTSTLDGEAISYAVMNYLLSSTK 845
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
+LFVTHYP + ++ + ++ ++ Y + + + + +LYK+VPG +
Sbjct: 846 AFILFVTHYPGLRVLEDLYPSNIMCCYMGYSKNQTIESHTKFSASNLIYFLYKLVPGTAP 905
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
S+G VA +A++P + RA ++A LE + + ++ AK
Sbjct: 906 KSYGLNVAHMAKIPIGVLLRAEKVSANLEKKHKEKELSQFAK 947
>gi|405123082|gb|AFR97847.1| DNA mismatch repair protein Msh3 [Cryptococcus neoformans var. grubii
H99]
Length = 1169
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 334/967 (34%), Positives = 516/967 (53%), Gaps = 122/967 (12%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q +E+K + DVLL++EVGYK++F GEDA+ A++ LGI A
Sbjct: 240 YTPLEKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGIVA-------------- 285
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
L++ G+KVGV+ QTETAA+K G + PF R L+ L+T AT ED
Sbjct: 286 --------LLSLGYKVGVITQTETAALKKIGDNRNAPFTRKLTHLFTAATY--VEDPSLS 335
Query: 209 EDGCGGESNYLVCVV------DDDGNVGKIRNGVFGDGFD-VRLGVVAVEISTGDVVYGE 261
+++ V+ + V + V D V++G+V V TGD+ + E
Sbjct: 336 SSSSSSSAHFDDPVIPGTAPPPTNALVAIMEQPVDRASDDRVKVGLVCVVPGTGDITWDE 395
Query: 262 FNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPA-----SNVRVECASRD 315
F+D +R+ LE L LSPAELLL Q LSK TEK+L +AG + VR+E D
Sbjct: 396 FDDSQIRAELETRLAHLSPAELLLPKQKLSKATEKVLAYFAGEPKYQGRNAVRIERID-D 454
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMD---VPEQGNHRS---------------- 356
A + + Y + G ++ D+N + + E RS
Sbjct: 455 IPEYDAAFDFLTNFYHDKGYKATTSKRDENDEQHLMIEGNKQRSLQPKLSQDEADTLLDD 514
Query: 357 ------------AIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT 404
AI +++ P V ++A+ IR++K+FGLE +SF + M
Sbjct: 515 EIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFRHTSSFVRFANRSHML 574
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
LS+NTL LE+ +N ++G YG+L+ +++H T G RLLR WV PL D + AR DA
Sbjct: 575 LSSNTLANLEIYQNQTDGGLYGSLMWLLDHCKTRMGKRLLREWVGRPLLDVAALKARADA 634
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
+ EI E+ SY H EK L S+L ++ PD+ RG+TR+ +
Sbjct: 635 IEEIMEN-NSY--------HMEK--------------LRSLLINM---PDLVRGLTRVQY 668
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
ATP+E ++ + + + E++ + S LL + T P ++
Sbjct: 669 GKATPNELATLLITL---------VRLASEFKPNM-GNVFRSHLLNNIPNTL--PTILDT 716
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
+ + L+ +N + A + D+ NL + +F ++ + + + EL+ + RK L
Sbjct: 717 SQRFLNALNLKQARENDVANLWADPD-RFPDIQDVKDCISVCEMELNEHLMELRKILKKP 775
Query: 645 NLEFMSVSGITHLIELPA-NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
L++++VSGI +L+E+P + K VP W K+++T+ RYH+PE+LT + E+L+
Sbjct: 776 TLKYITVSGIEYLVEVPIRDMKIVPAQWVKISATRTVNRYHTPEILTITKERTQHQEKLS 835
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQI 762
IV R A+ +F E Y+ + + +A +DCL +LA + + +P FV + E +
Sbjct: 836 IVAREAFAAFQSEVAEYH-DLVVVSKQIAVIDCLMSLAQTAAASGYCKPRFVAEPE---L 891
Query: 763 HICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVG 822
I +GRHP+++ + + +VP D + E +IITGPNM GKS +R +ALI MAQ+G
Sbjct: 892 KIVAGRHPMVEMLREEAYVPFDIHFSKEEGTTKIITGPNMAGKSSTVRAMALIVCMAQIG 951
Query: 823 SFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGR 882
SFVPA+S L V D + TRMGASD I +G+STF+ EL+E S ILR T +SLVI+DELGR
Sbjct: 952 SFVPAASVILSVHDSVQTRMGASDEIGRGKSTFMVELSETSDILRTVTPRSLVILDELGR 1011
Query: 883 GTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHVSYLTSHKV 941
GTST+DGVAIAYATL ++ E C LFVTHYP +A D+ + + +H+S+ ++
Sbjct: 1012 GTSTYDGVAIAYATLSHIAE-IGCNTLFVTHYPTVAQDLAREKPDKISNWHMSF---DEI 1067
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
P ++T+LY++ G+ E+SFG A+LA LP + A + ++ L+AE R+
Sbjct: 1068 KMP---DGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDIAQMRSSSLKAETQERL 1124
Query: 1002 QNRSAKR 1008
+ A+R
Sbjct: 1125 RGTIARR 1131
>gi|321459752|gb|EFX70802.1| putative MSH3, mismatch repair ATPase [Daphnia pulex]
Length = 1013
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 318/933 (34%), Positives = 488/933 (52%), Gaps = 88/933 (9%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASI 145
N K TPLEQQ+V LK KYP++LL++E GYKF+ FGEDA+ A +L + + +NF + S
Sbjct: 135 NLKLTPLEQQIVALKEKYPELLLVVECGYKFQIFGEDADKAGTILNMATYKKNNFFSCSF 194
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDV 205
P RL VHV++LV G KVG+V+Q ET A+KA G K PF R L +YTKATL +D
Sbjct: 195 PLHRLMVHVKKLVTHGCKVGIVRQKETTALKAVGASKHAPFKRELEIVYTKATLIVDDDC 254
Query: 206 GGGED-GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
G D C + +C++ K DG ++G++A ++ F D
Sbjct: 255 DGVIDVQC---VDIPLCIIFVAEAYAKT------DGSTAQIGILAFFTQDTKCIFDHFQD 305
Query: 265 GFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYA----GPASNVRVECASRDCFIG 319
RS L+++L L PAE++L Q ++ +T ++ +A +R E S F
Sbjct: 306 DCARSRLDSLLTHLQPAEIVLPDQGITNRTLDLVKQFALYKLSNGDCIRTEFTSH--FHW 363
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
A + +Y G+ ++ + ++P + +A+ HL
Sbjct: 364 AIASEMLSKVY---------------------GDDADMMDKLKDIPPVIHCCIAMAHEHL 402
Query: 380 KQFGLERIMCLGASFRSLSGSME--MTLSANTLQQLEV--LRNNSNGSEYGTLLHIMNHT 435
KQF LE+++ + + + + + N ++ L + L N + G++ H++N T
Sbjct: 403 KQFKLEQMVKMINDVKPYEAFDDNVLQMDGNCVRNLNLVPLTNETGPQLIGSVYHVLNQT 462
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G+RLLR W+ PL R+LI +RL+AV + H E +
Sbjct: 463 RTKPGARLLRSWLLRPLACRDLIESRLEAVGFFVD-------------HFE--------D 501
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
P+ L+ L PD+++ +T + H + P EF + + +QL L ++ +
Sbjct: 502 PE----LAPFKKFLKSLPDLEKQLTAVLHSRSKPKEF----HGLCKSWEQLTILCVELQS 553
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
K L ALL + S + A+ LS V + ++ L N + + E
Sbjct: 554 HYK-NVLPLSVALL--INSAVDSLKMAPFYAEQLSDVAISSGEKTKLFNRL----EDYPE 606
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKV 673
+ + +Q + ++ +L K +G+ L +++VSG +LIE+ VP +W K+
Sbjct: 607 MKMLFEKIQQTESKIQALKPSICKSIGLLALNYVTVSGDEYLIEVKNALIRAVPSSWIKI 666
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY-YAEFQAAVQALAA 732
++TK+ RY SPEV +L E L I AW F ++ Y+ F+ A A+A
Sbjct: 667 SATKQCCRYRSPEVQQLFGELCCLRELLKISADEAWLQFQRQVSTTSYSTFRRANNAIAT 726
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN----FVPNDTNLH 788
LDCL AL+ +++++N+VRP FVD E +++ GRHPVL IL ++PNDT L+
Sbjct: 727 LDCLIALSDVAKSENYVRPTFVD--EAGVLNVSQGRHPVLSRILQQTSSAEYIPNDTKLN 784
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ C IITGPNMGGKSC + QV ++ ++AQ+GSFVPA A L V I+ RMG D I
Sbjct: 785 TDGVRCMIITGPNMGGKSCLLSQVGILVVLAQIGSFVPAVEASLSVFKSIFIRMGLHDEI 844
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
GRSTF E+ E S IL++CT++SLVI+DELGRGT THDG AIAYA L YL++ KC+
Sbjct: 845 YAGRSTFFIEMMETSAILKSCTSRSLVIIDELGRGTGTHDGSAIAYAALKYLVKQTKCIT 904
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESS 967
LFVTHYP I ++ +F G V YH+ Y+ + + + D++ + +LY + PG S S
Sbjct: 905 LFVTHYPVIVQLEDEFPGHVANYHMGYILESEKADNVQADCDEEALVFLYTLTPGNSPKS 964
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
FG VA+LA +P S RA + + E S+
Sbjct: 965 FGLNVARLAGIPSSITDRAKLKSESFFTEAESQ 997
>gi|302692610|ref|XP_003035984.1| hypothetical protein SCHCODRAFT_52102 [Schizophyllum commune H4-8]
gi|300109680|gb|EFJ01082.1| hypothetical protein SCHCODRAFT_52102 [Schizophyllum commune H4-8]
Length = 1152
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 325/941 (34%), Positives = 505/941 (53%), Gaps = 88/941 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+QV+ELK P +LM+E+GYK++FFGEDA +AAK LG+ + D NF A+IP+
Sbjct: 175 YTPLEKQVLELKKANPGTVLMVEIGYKYKFFGEDAHVAAKELGMVCYNDRNFDVATIPSH 234
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
R ++H+++L++ G++VGV QTETAA+K ++ PF R L+ LYT AT +D+
Sbjct: 235 RRDIHLKKLLSQGYRVGVCDQTETAALKKVSDQRSAPFRRELTRLYTAATY--VDDLDSV 292
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D G + C+V++ + G G DV + ++++ S+GDVV+ F+D +R
Sbjct: 293 DDISGSSAPPFTCIVEESTS---------GAGADVHVAMISISPSSGDVVWDAFDDNPMR 343
Query: 269 SGLEAV------LLSLSPAELLLGQP-LSKQTEKMLLAYA---GPASNVRVECASRDCFI 318
LEA L+ PAELLL + LS T+KML + + RVE F
Sbjct: 344 LELEASAYHDTRLVHTRPAELLLPKTGLSGPTQKMLGHFTVATASGTQTRVEH-----FK 398
Query: 319 G----GGALAEVMSLYENMG----EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
G A A V Y + ++S N + E + + + P+L V
Sbjct: 399 GQMDYTDAFAYVSEFYSQKAPATSDGSISGASHLNPNASEAFTSGALMAAAADFPNLVVI 458
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
ALA TI+HL FGL + F + M L+ NTL+ LE+ N ++G G+LL
Sbjct: 459 ALAHTIKHLSAFGLADALRETRFFARFAARTHMLLAGNTLRNLEIYANETDGEVRGSLLW 518
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++ T T +G+RLLR WV PL D+ ++ R+ AV E+ S EK
Sbjct: 519 VLDQTQTKFGARLLRSWVGRPLIDKRVLDERVAAVEELVSSAS------------EK--- 563
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
L ++ L R PD+ +G+ +I + P E ++ + G ++
Sbjct: 564 -----------LVTLRQLLRRMPDLAKGLCKIQYGQCKPEELAILLTSFKRIGDAFPDVN 612
Query: 551 --IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
D ++ V ++ L++ L PA+ +++ ++ + A G+ +L
Sbjct: 613 SPADVGFQSNVLNEILYA-------LPKIKPAI----DEIVLHISLKEAAAGNREHLWK- 660
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA--NFKV 666
G++ V A + + EL+ + RK L +L+++ + +LIE+ N +
Sbjct: 661 DPGRYPAVLDAFQGRAMVEVELEEELKRVRKVLRYPSLKWLHQTDAEYLIEVKKSENRPI 720
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG-GYYAEFQA 725
P +W V+ TK RYH+P ++ + + E T RAA+ FL E +YA +
Sbjct: 721 PDDWKLVSRTKFYERYHTPTIINLIAERERYMETATAEARAAYSEFLSEIARTHYAPLRH 780
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDT 785
AV LAA DCL +LA ++ +VRP FVD+ + I +GRHP+++T+ D FVPND
Sbjct: 781 AVNQLAAADCLLSLAQVALRDGYVRPEFVDED---ALDIVAGRHPMVETLRDDPFVPNDV 837
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
+ +IITGPNMGGKS +R VALI IMAQ+G +VPA + + +LD + TRMGAS
Sbjct: 838 GMGRGSPRSKIITGPNMGGKSSCVRMVALIAIMAQIGCYVPAEAVRMSLLDSVLTRMGAS 897
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D + +GRSTF+ E+ E S IL T +SLVI+DELGRGTST DG+AIA AT+ YLL K
Sbjct: 898 DDLARGRSTFMVEMTETSEILHTATERSLVILDELGRGTSTFDGMAIADATMHYLLSEKH 957
Query: 906 CMVLFVTHYPKIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
C LF+THYP +A +++ KF V H++Y ++ G +++T+LY++ G++
Sbjct: 958 CKTLFITHYPLVATNLEQKFMKEVENLHMAYRADLRIDG------TREITFLYRLTSGIT 1011
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ-NR 1004
SFG + +LA LP + + A+ + + EV +R++ NR
Sbjct: 1012 SESFGVECGRLAGLPETVLRTASQRSQSFQVEVEARMKRNR 1052
>gi|393220474|gb|EJD05960.1| hypothetical protein FOMMEDRAFT_104344 [Fomitiporia mediterranea
MF3/22]
Length = 1173
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 326/943 (34%), Positives = 497/943 (52%), Gaps = 84/943 (8%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
PS QT YTPLE+QV+ LK KY D +LM EVGYK+RFFGEDA +A++VL I D
Sbjct: 235 PSGQT-----YTPLEKQVLALKEKYLDAILMFEVGYKYRFFGEDARIASEVLNIAHFPDR 289
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
NF+TAS+P R ++H+RRL++ G+KVG++ Q ETAA+K + PF R L+ +YT AT
Sbjct: 290 NFLTASVPDHRRDIHLRRLLSHGYKVGIIGQMETAALKKISDTRNKPFERALTHMYTAAT 349
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGV--VAVEISTGD 256
D + +C + +G G G D R+ + VAV ST D
Sbjct: 350 YIDEIDADDDDSRIAPPVFMCIC----ESMLG-------GMGVDERVSISMVAVTPSTSD 398
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASN-------VR 308
V++ EF DGF+R+ LE + + P+E+L + LSK T+K+L ++ +S+ VR
Sbjct: 399 VLWDEFEDGFMRNELETRMAHIRPSEILSSKDKLSKVTQKILQYHSKESSSKTLARDRVR 458
Query: 309 VECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA 368
+E D A ++ + Y G N E + I ++P
Sbjct: 459 LERYD-DEMNYTDAFRQLQTFYAQKG----------NTRASENFKSGKLLAAISDLPRKV 507
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
V ALA ++ +L FGL ++ F + M L+ANTL LE+ RN ++ + G+L
Sbjct: 508 VIALAHSLNYLNSFGLGDVLTEMQFFSKFTERQHMLLNANTLSNLEIYRNQTDFTMRGSL 567
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
+ ++N T T +G+RLL+ W+ PL D + AR+DAV I + S +
Sbjct: 568 MWVLNRTKTTFGARLLKSWIGRPLTDVGALQARVDAVEAIISAEASKSRERLLRL----- 622
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
+L +G++ D+ +G++RI + TP E +++A A
Sbjct: 623 --------------RELLKEIGKT-DLAKGLSRIQYFKCTPKELARLLRAFGKAADAFLP 667
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
E + L + +L +I T P + K+ S +N + AD+ D + +
Sbjct: 668 F-------ENIEDVGLANPVLNEIIFTL--PKIRDSVRKIGSCLNLKKADE-DKRDELWS 717
Query: 609 SNGQFSEVARARKAVQSAKEEL-DSLINMCRKQLGMRNLEFMSVSGIT----HLIELPAN 663
++ EV + A+ + EL D L M ++ + L F + + +L+E+ N
Sbjct: 718 DPDKYPEVDDLKMAIMVVESELADHLKTMNLDEVDIL-LPFYRLPSKSELRQYLVEVKKN 776
Query: 664 FK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE-FGGYY 720
K +P+ W V+STK RY +PEV L + A E+L A+ +FL E +Y
Sbjct: 777 EKRDIPVTWEVVSSTKSARRYRTPEVRKMLQERAQFQEKLKAEANKAYVAFLSEIMDEHY 836
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
+ AV LA DCL +LA ++ N+V+PVFVD + + I GRHP+++ + D F
Sbjct: 837 VVLRNAVNKLAVADCLFSLAEVASQGNYVKPVFVDQETDI-LEITDGRHPMIELLRSDPF 895
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPN + +IITGPNMGGKS R VALI +MAQ+G++VPA+S L LD I T
Sbjct: 896 VPNTVCIGGSDTKTKIITGPNMGGKSSATRMVALIALMAQIGTYVPAASVRLSPLDAILT 955
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGASD + +GRSTF+ E++E S IL + T +SLVI+DELGRG+ST DG+AIA ATL++L
Sbjct: 956 RMGASDDLAKGRSTFMVEMSETSDILHSATKRSLVILDELGRGSSTFDGMAIAGATLEHL 1015
Query: 901 LEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
+E+ C LF+THYP +A + K V H+ + ++G + +T+LY++
Sbjct: 1016 VENISCKTLFITHYPVVASSSEQKHPDKVINLHMGFTEETTLLG------KRTITFLYQL 1069
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
G+S S+G + A+LA + S + +A A ++ V SR Q
Sbjct: 1070 TKGISSGSYGIECARLAGISESLLEKAEERAEFMQRTVQSREQ 1112
>gi|443898358|dbj|GAC75693.1| mismatch repair MSH3 [Pseudozyma antarctica T-34]
Length = 1112
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 326/945 (34%), Positives = 508/945 (53%), Gaps = 91/945 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q++ELK +P VLL+IEVGYK +F+GEDA +A+K L I + N +TA IP
Sbjct: 208 YTPLEKQILELKAAHPGVLLIIEVGYKLKFYGEDARIASKELNIMCFPERNLLTAMIPVH 267
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
RL++HV+RL+ AG KVGVV+Q ET A+KA PF R L+ALYT +T +D+
Sbjct: 268 RLHIHVKRLIQAGHKVGVVRQIETRALKAASKNAYTPFVRKLTALYTASTW--IDDLSSS 325
Query: 209 ED---GCGGESNY----LVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+D G Y L+ +V+ G G V +G+++VE++TG + Y +
Sbjct: 326 DDVNLATGAAHTYQPKSLMALVEQS-------EGGNGPEDRVAIGLISVEVNTGYLTYDQ 378
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML--LAYAGPASNVRVE-CASRDCFI 318
F+D R+ LE + L+PAELL+ Q L++ TEK++ L +G VR+E AS+ +
Sbjct: 379 FSDSHARTELETRIAHLAPAELLVPQELTRPTEKVIGYLLGSGAEGGVRIERVASKLDY- 437
Query: 319 GGGALAEVMSLYENM--GEDTLSNNEDQNMDVPEQGNHRSAIEG-IMNMPDLAVQALALT 375
A V Y + G+ T +N E MDV Q + + I ++P LA+ ALA
Sbjct: 438 -NQAFQSVTQFYRDQVSGDSTSTNVE---MDVDAQDKRPAELMSLIQSLPHLALIALAQI 493
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
I HL+ F LE I L +F+S S M L++NTL LE+ R +G E G+L+ +++
Sbjct: 494 IHHLQAFNLESICTLSTNFQSFSSRTTMLLNSNTLANLEIFRT-VDGQEKGSLIWLLDKC 552
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G RLLR+WV+ PL D + + RLDA+ I S SY V +
Sbjct: 553 RTSMGRRLLRKWVSRPLTDVDALEKRLDAIEAII-SAKSY---------------VVRML 596
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
P F L PD++RG+ R+ + ATP+E V+ ++ ++++ D
Sbjct: 597 PNFLQGL----------PDLERGLARMTYGRATPTELATVLLSLNRVTQEVRPAERD--- 643
Query: 556 REKVTSKTLHSALLKRLILT-ASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+ L S L++ +L A+ + +S A ++ DL ++
Sbjct: 644 -----TWKLDSGLVEEHLLNLAAGKTAVQTYLNQISIKEARANNKADLF----ADAERYP 694
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAK 672
+ A+ + + EL + RK L +LE+ SVSG+ +L+E+ KVP +W +
Sbjct: 695 AIQTAKDNIAIVETELREHLRELRKTLHRPSLEYASVSGVDYLVEVRVADAKKVPADWLR 754
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQALA 731
V++TK +R+H+PEV+ E L +A+ F++ Y + V +LA
Sbjct: 755 VSATKAMVRFHTPEVIRLTRLRDQHKETLAAAAESAFGDFVRAMCTTEYVVLRNVVTSLA 814
Query: 732 ALDCLHALATLSRNKNFVRPVFV-----DDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
LD L +LA L+ + + RP F D V++ + + RH +L+ + ++PND
Sbjct: 815 VLDVLVSLAELAASSGYTRPRFEPSWPGDGESGVRVEVKAMRHAILEVVSPLPYIPNDLV 874
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L + ++TG NMGGKS +R + L+ ++AQ+GS+VPA+ A+L V DG++ RMGA D
Sbjct: 875 LSDDTSRAVLLTGCNMGGKSSVVRTLGLLVVLAQIGSYVPAAEAKLGVHDGVFVRMGARD 934
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
++ GRSTF+ E+ E + ILR T +SLVI+DELGRGTSTHDGV IA+ L+YLL+ K
Sbjct: 935 AMFAGRSTFMVEVAETAEILRAVTPRSLVILDELGRGTSTHDGVCIAWGVLEYLLQLKSM 994
Query: 907 -MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
V+F+THY ++A++ ++ H++Y+ + +LY + G +
Sbjct: 995 PNVVFITHYLQLAELVRRYGAR--NMHMAYVQR------------DGIQFLYTLKQGAT- 1039
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
+SFG A+LAQLP A +A +++A +RVQ +AK+ L
Sbjct: 1040 ASFGIHCARLAQLPSQITHTAEAVAQRMQAHHETRVQVAAAKKVL 1084
>gi|392573415|gb|EIW66555.1| hypothetical protein TREMEDRAFT_74736 [Tremella mesenterica DSM 1558]
Length = 1875
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 344/986 (34%), Positives = 514/986 (52%), Gaps = 131/986 (13%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGY----------------------KFRFFGEDAEMA 126
+TPLE+Q E+K KYPDV+LM+E G RF GEDA+ A
Sbjct: 904 FTPLEKQYKEIKVKYPDVILMMEGGLFMSLKMVANSISGLQVQSTHVDPLRFHGEDAKNA 963
Query: 127 AKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF 186
+K LGI A + NF TASIPT+RL++HV++L++ G+KVGV+ QTETAA+K + PF
Sbjct: 964 SKELGIVAFPNRNFYTASIPTYRLHIHVKKLISLGYKVGVISQTETAALKKVSDNRNAPF 1023
Query: 187 GRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN--VGKIRNGVFGDGFD-- 242
R L+ L+T AT ED + L N V + G+ G D
Sbjct: 1024 TRELTHLFTAATY--VEDSSMSSSSVLTDDPVLPGSAPPPTNALVAIVEQGLGGLTADER 1081
Query: 243 VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYA 301
VR+G+V+V TGDVV+ EF+D +RS LE L LSPAEL++ + LSK TEKML +A
Sbjct: 1082 VRIGLVSVVPGTGDVVWDEFDDSPVRSELETRLDHLSPAELIIPARDLSKATEKMLNHFA 1141
Query: 302 G-----PASNVRVECASRDCFIGGGALAEVMSLYENM---------GE----DTLSNN-- 341
G +++VR+E + AL+ + Y + G+ D +SNN
Sbjct: 1142 GISRTSVSASVRIERVDKVAKY-SAALSFLSDFYNQVMNARDRRTSGDIEMIDLVSNNNE 1200
Query: 342 --EDQNMDVPEQGNHR---------------------SAIEGIMNMPDLAVQALALTIRH 378
ED D P + A+ ++ P V ALA+ ++H
Sbjct: 1201 DIEDDAPDCPSTDDRDVVLADDNAQGLLGLASGVPSVEAVLALVAFPKQVVVALAIAVKH 1260
Query: 379 LK-QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
L+ + +G + E ++NTL L N ++G YG+L +++HT T
Sbjct: 1261 LQGTVSIVEPSTMGGLMAHSFQTGERIQASNTLVNL----NQTDGGVYGSLAWLLDHTKT 1316
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G RL+R W+ PL D + ARLDA+ EI + H EK
Sbjct: 1317 RMGRRLMREWIGRPLLDVRALRARLDAIEEIM---------TNTLYHMEK---------- 1357
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
L S+L ++ PD+ RG+TR + ATPSE ++ + G + + D
Sbjct: 1358 ----LRSLLVNM---PDLVRGLTRAQYGKATPSELATILTGLNRTGSEFKPNEGD----- 1405
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
S+LL ++ T P + KA + L +N +AA + D NL + + ++ ++
Sbjct: 1406 -----IFSSSLLNNIVKTL--PTIRDKAREFLGAMNTKAAFENDEANLWVDPD-RYPDLQ 1457
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA--NFKVPLNWAKVNS 675
A+ + + ELD + RK L L +++VSGI L+E+P + VP W K++S
Sbjct: 1458 DAKDCISVCESELDQHLKDIRKILKRPTLNYVTVSGIEFLVEVPVRDSKSVPARWMKISS 1517
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
TK +R+H+P++L + E LT R A +F + + E + LA +DC
Sbjct: 1518 TKHVVRFHTPDILRITKEREQHKETLTAAGRRALAAFQADISESH-ELVVVAKQLAVIDC 1576
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
L +L+ ++ + +P FV EP +HI +GRHP+++ + + +VP D + + +
Sbjct: 1577 LMSLSQVAAASGYCKPEFV--AEP-GLHIRAGRHPMVEMLRDEAYVPFDIDFSEQDGSVK 1633
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNM GKS +R ALI MAQ+GSFVPASSA + + D + TRMGASD I +G+STF
Sbjct: 1634 VITGPNMAGKSSCVRATALIVCMAQMGSFVPASSAVMGIHDAVQTRMGASDEISRGKSTF 1693
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
+ EL+E S ILR T ++LVI+DELGRGTST+DGVAIA+ATL + L C LFVTHYP
Sbjct: 1694 MVELSETSDILRTVTPRTLVILDELGRGTSTYDGVAIAHATLSH-LAGIGCDTLFVTHYP 1752
Query: 916 KIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
+A ++ +F + +H+++ +V P S ++T+LYK+ G++E+SFG A+
Sbjct: 1753 TVAEELAREFPAKISNWHMAF---DQVKSPDGSA---EITFLYKLSRGLAEASFGVWCAR 1806
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA LP S + A A +L+ E SR
Sbjct: 1807 LAGLPRSVLDNAQARADQLKRENESR 1832
>gi|156121255|ref|NP_001095775.1| DNA mismatch repair protein Msh3 [Bos taurus]
gi|151555688|gb|AAI49015.1| MSH3 protein [Bos taurus]
Length = 929
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 293/786 (37%), Positives = 431/786 (54%), Gaps = 84/786 (10%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
PS++ T + YTPLE Q +E+K + D +L +E GYK+RFFGEDAE+AA+ L IY HLDH
Sbjct: 206 PSNKRTKSI-YTPLELQYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDH 264
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
NFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+T
Sbjct: 265 NFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSLFSRKLTALYTKST 324
Query: 199 LEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
L EDV E ++YL+C+ ++ NV + G V +G+V
Sbjct: 325 L-IGEDVNPLVKLDDAVNVDEVMTDTSTSYLLCICENKENVKDKKRG------SVSIGIV 377
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPAS 305
V+ +TG+VV+ F D RS LE +L L P ELLL LS+QTE ++ A +
Sbjct: 378 GVQPATGEVVFDSFQDSASRSELETRILCLQPVELLLPSDLSEQTETLIHRVTAMSVRDD 437
Query: 306 NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP 365
+RVE F A EV Y +D + Q + I+N+
Sbjct: 438 RIRVERMKNVYFEYSHAFQEVTEFY---AKDVVDIKGSQ------------SFSDIINLE 482
Query: 366 DLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSE 424
+ +LA IR+LK+F LE+++ +F+ LSG ME MT++ TL+ LE+L+N ++
Sbjct: 483 KPVICSLAAIIRYLKEFNLEKVLSKPKNFKQLSGEMEFMTINGTTLRNLEILQNQTDMKT 542
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 543 KGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS---------- 592
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+ + L + PDI+RG+ I+H+ + EF +++ LY
Sbjct: 593 ----------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--- 632
Query: 545 QLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
H+ E++ + + H S LL+ IL P ++ L +N++AA GD
Sbjct: 633 -----HLKSEFQALIPAVNSHVESELLQTFILEI--PGLLSPVEHYLKILNEQAAKIGDK 685
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP- 661
L F + + + +Q +++ + + RK L + ++++VSG +IE+
Sbjct: 686 TELF-KDLSDFPLIKKRKDEIQDVTKKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKN 744
Query: 662 -ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
A +P +W K+ STK R+HSP ++ L E+L + C A W +FL+ F +Y
Sbjct: 745 SAVSCIPTDWVKIGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLAFLENFNEHY 804
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LD 778
AV LA +DC+ +LA +++ +++ RP E +I I +GRHPV+D +L D
Sbjct: 805 HTLCKAVHHLATIDCILSLAKVAKQRDYCRPTL---QEERKILIKNGRHPVIDVLLGEQD 861
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
FVPN T+L + E IITGPNMGGKS YI+QVALI +MAQ+GS+VPA A + ++DGI
Sbjct: 862 QFVPNSTDLSGDSERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIVDGI 921
Query: 839 YTRMGA 844
+ + G
Sbjct: 922 FHKDGG 927
>gi|296485077|tpg|DAA27192.1| TPA: mutS homolog 3 [Bos taurus]
Length = 925
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 292/783 (37%), Positives = 430/783 (54%), Gaps = 84/783 (10%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
PS++ T + YTPLE Q +E+K + D +L +E GYK+RFFGEDAE+AA+ L IY HLDH
Sbjct: 206 PSNKRTKSI-YTPLELQYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDH 264
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
NFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+T
Sbjct: 265 NFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSLFSRKLTALYTKST 324
Query: 199 LEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
L EDV E ++YL+C+ ++ NV + G V +G+V
Sbjct: 325 L-IGEDVNPLVKLDDAVNVDEVMTDTSTSYLLCICENKENVKDKKRG------SVSIGIV 377
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPAS 305
V+ +TG+VV+ F D RS LE +L L P ELLL LS+QTE ++ A +
Sbjct: 378 GVQPATGEVVFDSFQDSASRSELETRILCLQPVELLLPSDLSEQTETLIHRVTAMSVRDD 437
Query: 306 NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP 365
+RVE F A EV Y +D + Q + I+N+
Sbjct: 438 RIRVERMKNVYFEYSHAFQEVTEFY---AKDVVDIKGSQ------------SFSDIINLE 482
Query: 366 DLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSE 424
+ +LA IR+LK+F LE+++ +F+ LSG ME MT++ TL+ LE+L+N ++
Sbjct: 483 KPVICSLAAIIRYLKEFNLEKVLSKPKNFKQLSGEMEFMTINGTTLRNLEILQNQTDMKT 542
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 543 KGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS---------- 592
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+ + L + PDI+RG+ I+H+ + EF +++ LY
Sbjct: 593 ----------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--- 632
Query: 545 QLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
H+ E++ + + H S LL+ IL P ++ L +N++AA GD
Sbjct: 633 -----HLKSEFQALIPAVNSHVESELLQTFILEI--PGLLSPVEHYLKILNEQAAKIGDK 685
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP- 661
L F + + + +Q +++ + + RK L + ++++VSG +IE+
Sbjct: 686 TELF-KDLSDFPLIKKRKDEIQDVTKKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKN 744
Query: 662 -ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
A +P +W K+ STK R+HSP ++ L E+L + C A W +FL+ F +Y
Sbjct: 745 SAVSCIPTDWVKIGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLAFLENFNEHY 804
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LD 778
AV LA +DC+ +LA +++ +++ RP E +I I +GRHPV+D +L D
Sbjct: 805 HTLCKAVHHLATIDCILSLAKVAKQRDYCRPTL---QEERKILIKNGRHPVIDVLLGEQD 861
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
FVPN T+L + E IITGPNMGGKS YI+QVALI +MAQ+GS+VPA A + ++DGI
Sbjct: 862 QFVPNSTDLSGDSERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIVDGI 921
Query: 839 YTR 841
+ +
Sbjct: 922 FHK 924
>gi|343425332|emb|CBQ68868.1| related to DNA mismatch repair protein [Sporisorium reilianum SRZ2]
Length = 1162
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 324/945 (34%), Positives = 503/945 (53%), Gaps = 77/945 (8%)
Query: 81 SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNF 140
+ T YTPLE+Q++ELK +P VLL+IEVGYK +F+GEDA +A+K L I + N
Sbjct: 223 NDTDSGPTYTPLEKQILELKAAHPGVLLIIEVGYKLKFYGEDARIASKELNIMCFPERNL 282
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT-- 198
+ A IP RL++HV+RL+ AG KVGVV+Q ET A+KA PF R L+ALYT +T
Sbjct: 283 LAAMIPVHRLHIHVKRLIQAGHKVGVVRQIETRALKAASKNANTPFVRKLTALYTASTWI 342
Query: 199 --LEAAEDVGGGE-DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTG 255
L +++D+ D + L+ +V+ G G V +G+V+VE++TG
Sbjct: 343 DDLSSSDDLAANMGDAYTNQPKSLMAIVEQS-------EGGNGPEDRVSIGIVSVEVNTG 395
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML--LAYAGPASNVRVE-CA 312
+ Y +F+DG RS LE + L+PAE+L+ L++ TEK++ L +G VR+E A
Sbjct: 396 HLTYDQFSDGHARSELETRIAHLAPAEVLVPPKLTRPTEKVISYLLGSGAEGGVRIERLA 455
Query: 313 SRDCFIGGGALAEVMSLYENMG---EDTLSNNEDQNMDVPEQ--GNHRSA-----IEGIM 362
++ + A V Y + G E + + ED G+ S+ + I+
Sbjct: 456 AKPDY--NQAFQAVTHFYRDRGLEAEASATTEEDPTAPSATAAAGDASSSKSTPFMSLIL 513
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
++P L++ ALA I+HL+ F LE I L +FRS S M L++NTL LE+ R+
Sbjct: 514 SLPHLSLIALAQIIQHLEAFQLESICTLSTNFRSFSSRTTMLLNSNTLANLEIFRSADEQ 573
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
+E G+L+ +++ T G RLLR+WV+ PL D + + RLDAV +
Sbjct: 574 TERGSLIWLLDKCKTAMGRRLLRKWVSKPLTDVDRLEERLDAVQAL-------------- 619
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
D K+ Y+L ++ L PD++RG+ R+ + ATP+E V+ L
Sbjct: 620 -RDGKS-----------YVLRTLPNLLHGLPDLERGLARMTYGRATPTELATVL---LSL 664
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
+ Q+ D E T T S + L + K +S A ++ DL
Sbjct: 665 NRVTQEFKAD----EAATWNTRSSLIDTHLTSLLCGKQPVQKYLNQISIKEARANNKPDL 720
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA 662
+ + ++ + EL + RK L +L+++SV+G+ +L+E+
Sbjct: 721 FP----DPDLYPAIQASKDNIAIVDTELREHLREIRKLLHRPSLDYVSVAGVDYLVEVRV 776
Query: 663 N--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGY 719
KVP+ W +V++TK +R+H+PEV+ E L A+ +F+ E
Sbjct: 777 ADAKKVPVEWLRVSATKSMVRFHTPEVIRLTKVRDQHRETLDAAADEAFAAFVGEMCRTE 836
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV--DDHEPVQIHICSGRHPVLDTILL 777
Y + V +L LD L +LA ++ + + RP FV D E V + I RHP+L+ +
Sbjct: 837 YVALRNVVASLGVLDVLLSLAEVASSAGYTRPTFVATPDGESVPVEIHGMRHPILELVSP 896
Query: 778 DNFVPNDTNLHAEREYCQII-TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
++PND L I+ TG NMGGKS +R + L+ IMAQ+GSFVPA+SA L + D
Sbjct: 897 LPYIPNDIALSTPTSTRAILLTGCNMGGKSSVVRTLGLLVIMAQLGSFVPATSARLGIHD 956
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
G+Y RMGA D++ RSTF+ E++E + ILR+ TA+SLV++DELGRGTSTHDGV IA
Sbjct: 957 GVYVRMGARDAMFAARSTFMVEVSETADILRSVTARSLVVLDELGRGTSTHDGVCIASGV 1016
Query: 897 LDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYL-TSHKVMGPMDSKSDQD-- 952
L++LL ++ V+F+THY ++ +++ +F V H++++ TS D D
Sbjct: 1017 LEWLLARERAPNVVFITHYLQLGEMERRFARKVRNMHMAFVETSPADFAEFGGLDDDDAA 1076
Query: 953 ---VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ +LYK+ G++ SFG A+LA LP + A ++A+LE
Sbjct: 1077 TGHIEFLYKLRAGIASKSFGIHCARLAGLPEGILKSAARVSAQLE 1121
>gi|403416984|emb|CCM03684.1| predicted protein [Fibroporia radiculosa]
Length = 1089
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 317/935 (33%), Positives = 508/935 (54%), Gaps = 90/935 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS-IPT 147
Y+PLE QV++LK K+P LLM+EVGY+ FFGEDAE+ K LG NF +A+ IP
Sbjct: 200 YSPLELQVLDLKAKHPGTLLMVEVGYRMNFFGEDAEIVGKELGFVCFPSRNFSSAAMIPV 259
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
R VH+++L++ G+KVG+V+QTETAA+K G + F R L+ LYT AT E++
Sbjct: 260 HRQEVHLKKLLSKGYKVGIVEQTETAALKKVGDNRKVLFTRKLTHLYTAATY--IEELDS 317
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
+D + L+C+V++ ++ G+ D V++G++ + STGDVV+ EF D +
Sbjct: 318 PDDLEPATAPPLMCLVEE------LKGGMGADE-RVQIGMIVICPSTGDVVWDEFEDNHM 370
Query: 268 RSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYA---GPAS---NVRVECASRDCFIGG 320
R+ LE ++ P ELLL + LS +EK+L+ + P + +RVE +D
Sbjct: 371 RTELETRMVHSKPYELLLPEGRLSNPSEKLLVYFTEQPNPLTAEHQIRVERFKQD-LTYT 429
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A + + Y + + ++ D G +A+ G P L V ALA TI++L
Sbjct: 430 EAFSYLTDFYSDKSKSAFAS------DSYNTGKLMAAVTGF---PKLVVAALAYTIKYLA 480
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
F +E + F + M L+ NTL LE+ RN ++ + G+L+ I++HT T +G
Sbjct: 481 NFDIENCLVETNFFTKFAERTHMLLNGNTLTNLEIYRNETDYTTKGSLIWILDHTSTKFG 540
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+R+LR WV PL + ++ R+ AV EI +D T P+
Sbjct: 541 ARMLRSWVGRPLTNVKILKERISAVEEIL-------------------ADGT---PK--- 575
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA---ILYAGKQLQQLHIDGEYRE 557
L+ + L R PD+ +G+ RI + TP E ++ A I A + + LH D ++
Sbjct: 576 -LTHLRELLRRLPDLAKGLCRIQYGKCTPQELAVLLPAFSKIAAAFQPINGLH-DAPFKS 633
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
K+ ++ + A+ P + +L+++++ + A +G L + ++ E+
Sbjct: 634 KILNE-----------IVAALPNLREPMNELMASISLKMAKEGKKEALWADPD-KYPEID 681
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL--PANFKVPLNWAKVNS 675
++Q + EL + R+++ L + + +G +L+E+ N ++P+ W V+S
Sbjct: 682 SITVSIQIVESELMDELKNIRRRIKKPALMYGTWNGEEYLVEIRKDENREIPVTWFLVSS 741
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG-GYYAEFQAAVQALAALD 734
TK RYH+PEV L+ A E L + A+ SFL+E +YA + AV LA D
Sbjct: 742 TKIMRRYHTPEVKKKLEHRARLKEALNMEANKAYLSFLQEISRKHYAVLRDAVNKLAVAD 801
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
CL +LA ++ + +V+P D + I GRHP+++ + D FVPN + +
Sbjct: 802 CLMSLARVALQEGYVKPEITADD---TLEIVEGRHPMIEVLRSDPFVPNSVYMGGAQPRS 858
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+IITGPNMGGKS +R +AL IMAQ+GS+VPA S ++ +LD ASD + +GRST
Sbjct: 859 RIITGPNMGGKSSAVRMIALCAIMAQIGSYVPAQSMKIGLLD-------ASDELARGRST 911
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ + S IL+ T ++LVI+DELGRGT+T DG+AIA A L +L+E +C LF+THY
Sbjct: 912 FMVEMQQTSDILQLATPRTLVILDELGRGTATFDGMAIASAVLQHLIEKTRCRTLFITHY 971
Query: 915 PKIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
P++A D++ +F VG H+ + ++ G ++VT+LY + G++E SFG +
Sbjct: 972 PRLATDLERRFPLDVGNLHMGFAEDTRIDG------TREVTFLYTLTHGLTEESFGVECG 1025
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSRV-QNRSAK 1007
+LA LP + A+ A L A ++ RV QNR K
Sbjct: 1026 RLAGLPEQLLQVASERAQVLRAAITRRVRQNRFRK 1060
>gi|449543528|gb|EMD34504.1| hypothetical protein CERSUDRAFT_97762 [Ceriporiopsis subvermispora B]
Length = 1096
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 311/929 (33%), Positives = 484/929 (52%), Gaps = 74/929 (7%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q+ +LK KYP +LLM+EVGYK F+ +DA +A+K LGI + NFM ASIP
Sbjct: 203 YTPLELQIRDLKAKYPGILLMVEVGYKIIFYEDDARIASKELGIMCYPKRNFMQASIPVH 262
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
R VH+++L++ G+KVG+V+QTETAA+K G + PF R L+ LYT AT A +
Sbjct: 263 RKEVHLKKLLSQGYKVGIVEQTETAALKKVGDNRGAPFTRELNHLYTSATYVDA--LNSV 320
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D L+C+V+ +R G+ D V + +V + STGDV++ EF D +R
Sbjct: 321 DDLEPTSPPSLMCLVE------SLRGGMSVDE-RVSVAIVVITPSTGDVIWDEFEDNSMR 373
Query: 269 SGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPA---SNVRVECASRDCFIGGGALA 324
LE ++ + P ELLL LS+ TEK++ A A +R+E D A +
Sbjct: 374 IELETRMVHMRPQELLLPASKLSRSTEKLISYTAENAVSDQKIRIE-RYEDALSYTDAFS 432
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQG-NHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
+ Y + D +G + I + P A ALA ++++L FG
Sbjct: 433 VLSKFYAD----------DTKFAAASEGFTSGKLMASIADFPKQAAMALAHSVQYLSGFG 482
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
+E + F + M L+ NTL LE+ RN ++ + G+L+ I++ T T +G+R
Sbjct: 483 VEDCLLETKFFAKFTERTHMLLNGNTLTNLEIYRNETDYTPKGSLMWILDRTTTKFGART 542
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LR+WV PL D ++ R +A+ EI + P+ L+
Sbjct: 543 LRQWVGRPLVDSTVLRQRAEAIDEI----------------------IRDTSPR----LT 576
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
+ L R PD+ RG+ RI + TP E +++A +++ + +
Sbjct: 577 LLRQLLKRLPDLARGLCRIQYGKCTPQELAVLLRA-------FERIAATFNAADPGARPS 629
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
S LL + T P + LL V+ + A +GD M ++ E+ ++
Sbjct: 630 FKSQLLNDIFTTL--PKLKEPILSLLEDVDLKKASEGD-KEQMWSDLEKYPEMDNLTLSI 686
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA--NFKVPLNWAKVNSTKKTIR 681
Q + EL + RK L L + + +G +LIE+ N ++P W V+ T+ R
Sbjct: 687 QVLETELMDELKNIRKILKKPALTYTANAGEEYLIEVKKNENREIPPQWTMVSGTRSVRR 746
Query: 682 YHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG-YYAEFQAAVQALAALDCLHALA 740
+ +PE++ L + A E L + + +FLK +Y + V LA DCL +LA
Sbjct: 747 FRTPELIQVLAKRAQCKEALAAEAQRIYLAFLKRISQEHYGLLRDTVNKLAVADCLLSLA 806
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGP 800
++ + + +PVF + + I GRHP+++ + FVPN + +ITGP
Sbjct: 807 QVALLEGYTKPVFT---QAGGLEIVEGRHPMVEVLTSAPFVPNTVRMGEGEPGSIVITGP 863
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS +R +AL IMAQ+GS+VPA S +L ++D I TRMGASD + +GRSTF+ E+
Sbjct: 864 NMGGKSSAVRMIALCAIMAQIGSYVPAKSMKLGLMDSILTRMGASDELSRGRSTFMVEMQ 923
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-D 919
E S IL T++SLVI+DELGRGTST DG+A+A A L +L+E++KC LF+THYP +A D
Sbjct: 924 ETSDILHIATSRSLVILDELGRGTSTFDGMAVASAVLQHLVENRKCKTLFITHYPHVAID 983
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLP 979
++ +F V H+ + ++ G ++VT+LY++ PG++ SFG + A+LA LP
Sbjct: 984 LERRFPHDVRNMHMGFTEDTRIDG------TREVTFLYRLTPGITTESFGVECARLAGLP 1037
Query: 980 PSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
S + AT A ++ R++ R
Sbjct: 1038 ESILRLATEKARSMQDATEQRIRRNKCVR 1066
>gi|320587388|gb|EFW99868.1| DNA mismatch repair protein msh3 [Grosmannia clavigera kw1407]
Length = 1180
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 340/1021 (33%), Positives = 527/1021 (51%), Gaps = 132/1021 (12%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K ++PD LL++EVGYKFRFFGEDA A + LGI AH
Sbjct: 211 TPMEVQFLEIKRQHPDTLLVVEVGYKFRFFGEDARTAGRQLGIVCVPGKMRYDEDASEAH 270
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
L+ F +ASIP RL VHVRRLV AG KVGVV+Q ETAA+K G + PF R L+++YT
Sbjct: 271 LE-RFASASIPVPRLAVHVRRLVAAGHKVGVVRQMETAALKKAGDNRNAPFVRRLTSVYT 329
Query: 196 KATLEAAEDVGGGEDGCGGESN--YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
K T E + + N Y++C+ + +R G G V +GV+AV+ +
Sbjct: 330 KGTYVDEEMEATTSETSEAKQNGGYILCLTET-----SVRGGGSGADERVEIGVLAVQPT 384
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-----R 308
TGD++Y +F DGFLRS LE LL ++P EL++ LS+ TEK++ +G A+NV R
Sbjct: 385 TGDILYDQFEDGFLRSELETRLLHIAPCELVIVGTLSRTTEKLVQHLSGSAANVFGDRTR 444
Query: 309 VECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA 368
VE + A +EV+ Y +G + D+ ++ +P+
Sbjct: 445 VERVA-GSPTAAKAHSEVVQFYGRVGGGDGDLDLDR----------------VLALPEAV 487
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
LA I+HL ++GL+ + L +F S + + L TL+ LEV RN ++ G+L
Sbjct: 488 TICLAAMIQHLVEYGLDHVFSLTKNFASFATRQHVLLGGTTLESLEVYRNATDHGLRGSL 547
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
L ++ T T +G RLLR+W+ PL D +++AR DAV E+ + T+ + + D
Sbjct: 548 LWAVDKTQTRFGHRLLRKWIGRPLLDGRVLAARADAVEELL----ARDTAAASARRDR-- 601
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
L +L + R+ D++R + RI + T SE AV+QA LQ+
Sbjct: 602 -------------LDRLLAASART-DLERSLIRICYGRCTRSELAAVLQA-------LQR 640
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ E E T L S +L+ + A+ PAV + L ++ +AA + D
Sbjct: 641 IAGAFEDDEGDTGHGLRSPILRNAV--AALPAVGPIVGRFLDQIDVDAARRNDKYAFFR- 697
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQL----GMRNLEFMSVSGITHLIELPAN- 663
+ ++ + + + + +L++ + + L + +++V+GI L+E+
Sbjct: 698 EPAETDDMTSHKMGIAAVELDLEAQQTVIAETLQTGSKAKAKPYVTVAGIEFLVEVSNTE 757
Query: 664 -FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
VP +WAK++ TK+ R+H P V L + E L C AA+ L+ Y
Sbjct: 758 LRHVPASWAKISGTKRVSRFHPPAVARLLRERDQHREALAAACDAAFADLLRAVAACYQP 817
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFV--DDHE-----PVQIHICSGRHPVLDTI 775
+ AV ALA LDCL +LA ++ +VRPV + DD + ++ I GRHPV + +
Sbjct: 818 LRDAVTALATLDCLVSLARVAALPGYVRPVVLGEDDRDNEKETAPRLVIRGGRHPVAEHL 877
Query: 776 LLDNFVP-----------NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
L ++P D N A + +ITGPNMGGKS ++R VAL+ ++AQ+GSF
Sbjct: 878 LPGGYIPFSTEMGGKDEDEDENATASKPPAILITGPNMGGKSSFVRAVALLTLLAQIGSF 937
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA + L + D I+TRMGA D++ G STF+ E++E + ILR TA+SLV++DELGRGT
Sbjct: 938 VPADAMALTLADAIHTRMGARDNLFAGESTFMVEVSETAAILRAATARSLVVLDELGRGT 997
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG-----TYHVSYLTSH 939
STHDG AIA+A L+++ +C LF+THY +A + G H+ + +
Sbjct: 998 STHDGAAIAHAVLEHIARDVRCRTLFITHYQSLARVADGLVDHAGLPLVQNVHMRFAARN 1057
Query: 940 KVM-------------------GPMDSKSDQD---VTYLYKVVPGVSESSFGFKVAQLAQ 977
+ + P +D D +T+LY+V PG++ S+G VA+LA+
Sbjct: 1058 RGLVGDAGKAEMKNTENTENSENPESPDTDTDNTEITFLYEVAPGMAHRSYGLNVARLAR 1117
Query: 978 LPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRV 1037
LP I+ A ++ ++E ++RV+ A L L Q+ P+S S R+
Sbjct: 1118 LPQRVIAVANRMSREMEH--NTRVRRLQAAAHLTADLLAHPQQ-----PLSAASIAANRL 1170
Query: 1038 E 1038
+
Sbjct: 1171 Q 1171
>gi|449669906|ref|XP_002164261.2| PREDICTED: DNA mismatch repair protein Msh3-like [Hydra
magnipapillata]
Length = 916
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 321/940 (34%), Positives = 485/940 (51%), Gaps = 128/940 (13%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K+K+ D+LL +E GYK+RFFG+DAE+AA+ L IY +DHNFMTASIP
Sbjct: 79 YTPLELQFMEIKSKHEDLLLFVECGYKYRFFGKDAEIAAEELNIYKSMDHNFMTASIPVH 138
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
RL++H+ RL+ G KVGVV QTET+A+KA G K+ F R L +YTKAT E+ G
Sbjct: 139 RLHIHMSRLLENGHKVGVVAQTETSALKAAGNNKSAVFSRKLMYIYTKATYLNLEE---G 195
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+ +C + + G F V+ V ST D+VY D
Sbjct: 196 NVVTKKNTGDFICSISE-------CEGCFN--------VLLVNPSTSDIVYDMNLD---I 237
Query: 269 SGLEAVLLSLSPAELLLG-QPLSKQTEKMLLAYAGPASNVRVE---CASRDCFIGGGALA 324
+GL + P E++ G L+ + ++ Y + +R+E C D F
Sbjct: 238 NGLNLIFHVFKPCEIVTGISDLNMEAGNLIKNYKAQKTVLRIEKFCCEMSDSF------- 290
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV-QALALTIRHLKQFG 383
Q R I D+++ Q L +L QF
Sbjct: 291 -------------------------NQFFERIKI-------DISLKQCACLMYSYLAQFH 318
Query: 384 LERIMCLGASFRSL-SGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
LE ++ + +RS S + M L +Q LE+ NN N G+L I+NHT + +G R
Sbjct: 319 LENLLNYSSGYRSFHSNTSFMKLDYTCIQNLELFSNNWNNQVSGSLFSILNHTYSAFGKR 378
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LL W+ PL D I+ RLDAV E+ + + VG
Sbjct: 379 LLINWLREPLRDVYEINKRLDAVDELKLCL---QLKSIVG-------------------- 415
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
+ L +S D++ G++ I++ P +F+ + ++ + ++ I +RE+ S
Sbjct: 416 --ICKVLQKSVDLENGLSLIYNLRCAPIQFLNICESF----ENIRSFFIS--HREEFMSN 467
Query: 563 TLHSALLKRLILTASSPAVIGK-AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
S +L + + P ++G + +NK G M F + + +
Sbjct: 468 FNSSIILD---ICSKVPDLLGNNILDFMKKLNKNEIRNGAKA-CMFADTINFPHLHKCLQ 523
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFKV-PLNWAKVNSTKKT 679
++ + L + + + R LEF +VSGI +LIE+ + K+ P NW KV++TK
Sbjct: 524 EIKVIEGLLAKHLLLDVTPVLGRKLEFKTVSGIEYLIEVRNVDVKILPENWIKVSATKHF 583
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
R +P + + +L E L + AW + L +F G Y + V L+ LDCL +L
Sbjct: 584 TRVRTPFIESHFHKLLRLRETLLLAADEAWQNLLIQFKGIYNNCRNVVVLLSTLDCLISL 643
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITG 799
AT++ +VRP F ++ I I GRHPV++T++ + +V NDT L+ E E +I G
Sbjct: 644 ATVANGVGYVRPKFTEN----VIMIKDGRHPVIETLINNQYVSNDTCLN-ETEKVMLIFG 698
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNMGGKS Y++QVA+ IMAQ+G +VPASSA L +LD IY RMGASD I G+STF+ EL
Sbjct: 699 PNMGGKSSYVKQVAICCIMAQMGCYVPASSACLPILDSIYCRMGASDKIAGGKSTFMVEL 758
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD 919
EASYI++N T SLVI+DELGRGTSTHDG AIAYATL++ +E +C +LF+THYP + +
Sbjct: 759 EEASYIMKNATCNSLVILDELGRGTSTHDGTAIAYATLEHFIEKIQCFLLFITHYPTLCE 818
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDV---TYLYKVVPGVSESSFGFKVAQLA 976
+K K+T S+ YH+++++ +D DV LYK+ G S+G VA++A
Sbjct: 819 LKCKYTKSLSLYHMTFMS-----------NDVDVNAIVLLYKLTKGKENRSYGINVARMA 867
Query: 977 QLPPSCISRATVIAAKLEA-----EVSSRVQNRSAKRDLL 1011
+ + +++A ++ +LE + RV N+ + D L
Sbjct: 868 GIDETILNKAAYMSKELETSTFMKRLLKRVFNQQVRSDRL 907
>gi|392595671|gb|EIW84994.1| DNA mismatch repair protein MSH3 [Coniophora puteana RWD-64-598 SS2]
Length = 1071
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 317/906 (34%), Positives = 472/906 (52%), Gaps = 89/906 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTP E+QV++L + PD +LMIE+GYKF F E +AK++ H F +
Sbjct: 218 YTPSEKQVLKLIKENPDTVLMIEIGYKFYFH----ENSAKLIHAEIFSLHRFQSIG---- 269
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
L++ G KVG+V+Q ETAA+K + F R L+ LYT T +++
Sbjct: 270 ------ETLLSQGHKVGIVEQVETAALKKVSDTRNELFDRKLTHLYTATTF--VDELESV 321
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D + L+C+ + K R D V + ++ + STGDVV+ EF+D +R
Sbjct: 322 DDASKHYAPSLLCLAE------KSRQPGVDDT--VTISLITICPSTGDVVWDEFDDSLMR 373
Query: 269 SGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPA---SNVRVECASRDCFIGGGALA 324
LE L PAELL + +SK T K+L + A VRVE ++ A
Sbjct: 374 IELETRLTHTRPAELLFPDKGMSKPTGKLLKHFTETAPFQQRVRVE-RFKELMSYTNAFD 432
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
V + Y E+T N+ D N D + I + P + ALA I+HL +F +
Sbjct: 433 LVTNFY---SEETKRNSTDVNAD--------ELLAVIADFPPQVIIALAHAIKHLSKFSI 481
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
F + M M L++NTL LE+ RN ++ S G+L+ I++ T T +G+RLL
Sbjct: 482 ADAFLGAKFFYKFTTRMHMLLNSNTLTNLEIYRNETDLSVKGSLMEILDRTNTKFGARLL 541
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
+ WV PL D+ + R+DAV EI +S L S
Sbjct: 542 KTWVGRPLVDKIALRDRMDAVDEIVKSPSDK--------------------------LVS 575
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
+ L + PD+ +G+ RI + T TP E +++ H+ E ++ SK L
Sbjct: 576 IRQVLRKMPDLAKGLCRIQYGTCTPQEMAVLLRTFNKVATMFD--HLPEEENKEFDSKLL 633
Query: 565 HSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
+ ILT P + LL+ VN +AA QG + M +F + + +Q
Sbjct: 634 ND------ILTVL-PKLKDSTNVLLAAVNMKAAGQGKK-DEMWADQDKFPALYENKLMIQ 685
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRY 682
+ + EL + RK L +LE+ SVSG L+E+ + K VP NW V+ TK RY
Sbjct: 686 TVESELADELKSIRKLLKKPSLEWTSVSGEEFLVEIRKSDKTEVPANWTIVSRTKVFTRY 745
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQALAALDCLHALAT 741
HSPEV + + A E L A+ SFL+E +Y+ + V LA +DCL +L+
Sbjct: 746 HSPEVRRKIQERARYRETLEAEAHKAFKSFLEEIIQDHYSILRHTVNTLATIDCLVSLSH 805
Query: 742 LSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPN 801
++ +VRP F +D + I GRHP+++ + D FVPND + + +IITGPN
Sbjct: 806 VALRDGYVRPEFSEDD---TLEIVEGRHPMVEALRTDPFVPNDVYMGGDAARNKIITGPN 862
Query: 802 MGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNE 861
MGGKS +R VALI IMAQ+GS+VPA S +L +LDGI TRMGASD + +GRSTF+ E++E
Sbjct: 863 MGGKSSSVRMVALIAIMAQIGSYVPAKSVKLSMLDGILTRMGASDELARGRSTFMVEMSE 922
Query: 862 ASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DI 920
IL++ T +SLVI+DELGRGTST DG++IA A L +L++ +C LF+THYP +A D+
Sbjct: 923 TGEILQSATDKSLVILDELGRGTSTTDGMSIADAVLQHLVQKVRCKTLFITHYPMVAMDL 982
Query: 921 KTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPP 980
+ KF + H+ Y+ ++ G +VT+LY++ PG++ +SFG + A+LA LP
Sbjct: 983 ERKFPAEIENLHMGYMAESRIDG------RTEVTFLYRLTPGIATNSFGVECARLAGLPE 1036
Query: 981 SCISRA 986
+ A
Sbjct: 1037 KVLEVA 1042
>gi|409046449|gb|EKM55929.1| hypothetical protein PHACADRAFT_96015 [Phanerochaete carnosa
HHB-10118-sp]
Length = 900
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 327/926 (35%), Positives = 490/926 (52%), Gaps = 81/926 (8%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K YTPLE QV+ LK K+P LLM EVGYK F+GEDA++AAK LGI + NF+ ASIP
Sbjct: 39 KTYTPLELQVLGLKKKHPGTLLMFEVGYKDYFYGEDAQVAAKHLGIVCYPSRNFLRASIP 98
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
R VH+++L+ G KVG+++QTETAA+K G + F R L+ LYT AT + D
Sbjct: 99 VHRREVHLKKLLARGLKVGIIEQTETAALKKAGDTRNEVFERKLTHLYTAATYVDSLD-S 157
Query: 207 GGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGF 266
GG L+C+V+ + V DG V + +V+V STGDVV+ +F D
Sbjct: 158 PDTLSFGGRVPPLLCIVE---------SPVDKDGEKVNVSIVSVCASTGDVVWDQFEDNG 208
Query: 267 LRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPASN---VRVECASRDCFIGGGA 322
+R+ LE L+ LSPAELLL + L++ T+K+L +A N R+E + A
Sbjct: 209 MRTELETRLVHLSPAELLLPEEALTRPTQKILSHFATHGHNEFTARIEHFA-STMSSSDA 267
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
V Y + N +N + + P V ALA +++L F
Sbjct: 268 FTFVAGFYAD-------KNRRENAKASDGFRSGELTAAVTIFPKGVVVALAHLVKYLSGF 320
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
+ + F + M L+ NTL L++ RN ++ ++ G+LL +++HT T +G+R
Sbjct: 321 DVADALLETRFFARFAERTHMLLNGNTLTNLQIYRNETDFAKRGSLLWVLDHTTTKFGAR 380
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
+LR WV PL DR + AR+DAV EI ++ T +L
Sbjct: 381 MLREWVGRPLTDRAALVARIDAVEEILSTLSPRLT-----------------------VL 417
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
+L L PD+ RG++RI + TP E ++ A G L ++ ++
Sbjct: 418 RQLLHGL---PDLARGLSRIQYGKCTPQELAILLPAFQRVGTALDRI--------PASTS 466
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKA 622
SA+L ++ + P V +L+ V+ +G + EV R K
Sbjct: 467 PFDSAILNGVV--DALPRVKAPVQGVLTRVDLAKLKEGQKEKMWKDVESSAPEVDRMNKT 524
Query: 623 VQSAKEELDSLINMCRKQLGMRNLEFM--SVSGITH--LIELP-ANFK-VPLNWAKVNST 676
+ S + I+ ++ G+ +L F +VS TH LIE+ A F+ +P +W +++T
Sbjct: 525 IASTRLA----IHHSSRRGGIPSLVFAFPNVSNHTHQYLIEIKKAEFRDLPADWLVISAT 580
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG-YYAEFQAAVQALAALDC 735
K R +P + L + A A E L + AA+ L E +YA + AVQ LA DC
Sbjct: 581 KTLRRLRTPIMADLLRRRAQALEALALAANAAYRGLLAEIAEEHYAVLRDAVQRLAVFDC 640
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
L +LA + + +VRP FV+ + + GRHP+++ + D FVPN ++ +
Sbjct: 641 LCSLAVVGVQEGYVRPEFVEGDNILVVE--DGRHPMIEKLRDDPFVPNSVDMGRRH---K 695
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNMGGKS +R VAL IMAQ+GS+VP +S L LDGI+ RMGASD I +GRSTF
Sbjct: 696 VITGPNMGGKSSVVRMVALCAIMAQIGSYVPVTSMRLSALDGIFIRMGASDDIVRGRSTF 755
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
+ EL E S IL+ T +SLV++DELGRGTST DG+AIA+A L++L+ K C LF+THYP
Sbjct: 756 MVELQETSSILQLVTPRSLVVLDELGRGTSTFDGMAIAHAVLEHLVTVKGCKTLFITHYP 815
Query: 916 KIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
+A D++ +F V H++Y ++ G + VT+LYK+ G++++SFG + A+
Sbjct: 816 TVARDLEHRFPQDVQNMHMAYTEDTRLDGT------RQVTFLYKLSDGLTQNSFGVECAR 869
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA L + A + K+E +V +
Sbjct: 870 LAGLDEQILRCAALKRDKMENDVRGK 895
>gi|71020383|ref|XP_760422.1| hypothetical protein UM04275.1 [Ustilago maydis 521]
gi|74700862|sp|Q4P6I8.1|MSH3_USTMA RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|46100091|gb|EAK85324.1| hypothetical protein UM04275.1 [Ustilago maydis 521]
Length = 1154
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 327/977 (33%), Positives = 512/977 (52%), Gaps = 109/977 (11%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
KT KPK S P YTPLE+Q++ELK ++P VLL+IEVGYK +F+G
Sbjct: 218 KTKGKPKASGAGTGP------------SYTPLEKQILELKAEHPGVLLIIEVGYKLKFYG 265
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
EDA +A+K L I + N +TA IP RL++HV+RL+ AG KVGVV+Q ET A+KA
Sbjct: 266 EDARIASKELSIMCFPERNLLTAMIPVHRLHIHVKRLIQAGHKVGVVRQIETRALKAASK 325
Query: 181 GKAGPFGRGLSALYTKAT----LEAAEDVGGGE-DGCGGESNYLVCVVD--DDGNVGKIR 233
PF R L+ALYT +T L + +D+ D + L+ +V+ + GN R
Sbjct: 326 NAYTPFVRKLTALYTASTWVDDLSSLDDLAANMGDAYTNQPKSLMAIVEQSERGNAQADR 385
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT 293
V +G+V+VE++TG + Y +F+DG RS LE + L+PAE+L+ L+K T
Sbjct: 386 ---------VSIGIVSVEVNTGHLTYDQFSDGHARSELETRIAHLAPAEVLIPPQLTKPT 436
Query: 294 EKML--LAYAGPASNVRVE--CASRDCFIGGGALAEVMSLYENMGEDTL----------S 339
EK++ L G VR+E A D A V Y + G ++ S
Sbjct: 437 EKVISYLLGNGADGGVRIERLAAMPDY---NQAFQSVTRFYRDRGLESPEVPEVPEVPGS 493
Query: 340 NNEDQN---MDVPEQGNHRSA--IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
+ D + + + RS+ I I+++P L++ ALA I+HL+ F LE I L +F
Sbjct: 494 SEADTTRLATTLADGADKRSSPLISLIVSLPQLSLIALAQIIQHLQAFQLESICTLSTNF 553
Query: 395 RSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCD 454
RS S M L++NTL LE+ R + +E G+L+ +++ + G RLLR+WV+ PL D
Sbjct: 554 RSFSSRTTMLLNSNTLANLEIFRTANEQTERGSLIWLLDKCKSAMGRRLLRKWVSRPLTD 613
Query: 455 RNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPD 514
+ + RLDAV + D K+ Y+L + + L PD
Sbjct: 614 IDKLQERLDAVEAL---------------RDGKS-----------YVLRRLDSVLHGLPD 647
Query: 515 IQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLIL 574
++RG+ R+ + ATP+E V+ L + Q+ D E T KT S + L+
Sbjct: 648 LERGLARMTYGRATPTELATVL---LSLNRVTQEFKAD----EAATWKTQSSLIDTHLLS 700
Query: 575 TASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLI 634
AS V+ +S A ++ DL + F + ++ + EL +
Sbjct: 701 LASGKQVVQTYLNQISIKEARANNKADLY----LDADVFPAIQASKDNMAIIDGELREHL 756
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPA--NFKVPLNWAKVNSTKKTIRYHSPEVLTALD 692
RK L +L+++SV+G+ +L+E+ KVP+ W +V++TK +R+H+PEV+
Sbjct: 757 REIRKLLHRPSLDYVSVAGVDYLVEVRVADAKKVPVEWLRVSATKSMVRFHTPEVMRLSK 816
Query: 693 QLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRP 751
E L + A+ F++E Y + V +LA LD L +LA ++R + RP
Sbjct: 817 IRDQHKETLDAAAQEAFARFVRELCKSEYVVLRNVVASLAVLDVLLSLAHVARAAGYTRP 876
Query: 752 VFV----DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQI-ITGPNMGGKS 806
VF+ D V + I RH +L+ + ++PND +L I ++G NMGGKS
Sbjct: 877 VFLRQPQDAEASVPVEIIGMRHAILEVVSAMPYIPNDVSLSTGDSGAAILLSGCNMGGKS 936
Query: 807 CYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYIL 866
+R + L+ IMAQ+GSFV A A + V D +Y RMGA D + GRST++ E++E + IL
Sbjct: 937 SVVRALGLVIIMAQIGSFVAADVARIGVHDAVYVRMGARDRMFSGRSTYMVEVSETADIL 996
Query: 867 RNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVLFVTHYPKIADIKTKF 924
+ T++S+VI+DELGRGTS+ DG +A L+YLL C +F+THY ++A ++ ++
Sbjct: 997 GSLTSRSMVILDELGRGTSSRDGYCLAAGVLEYLLT-LGCPPNTVFITHYLQLASMQRRY 1055
Query: 925 TGSVGTYHVSYLT-SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCI 983
+ H+++ + S ++ P + +YK+ PG++ SFG A LA+LP I
Sbjct: 1056 P-HLRNMHMAFTSNSRNLLDP--------IHLVYKLRPGIAH-SFGIHAAHLARLPLQII 1105
Query: 984 SRATVIAAKLEAEVSSR 1000
A+ I++ L A+ ++R
Sbjct: 1106 HSASTISSALYAKHTNR 1122
>gi|393238523|gb|EJD46059.1| hypothetical protein AURDEDRAFT_87246 [Auricularia delicata TFB-10046
SS5]
Length = 960
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 308/924 (33%), Positives = 482/924 (52%), Gaps = 57/924 (6%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+QV+ K KY +LL+ EVGYK+RF+GEDA +AA+ LG + + NF++AS P
Sbjct: 79 YTPLEKQVMHFKEKYSGILLIFEVGYKYRFYGEDARVAAQALGHVCYRNRNFLSASFPVT 138
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT-LEAAEDVGG 207
+ HV++L++ G KVG++ Q ETAA+K G + F R L L+T AT ++ +
Sbjct: 139 SRSQHVKKLLSLGHKVGIIGQAETAALKKVGNNRNKLFERKLLHLWTSATYIDDLDSHDN 198
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
++ G ++C+V++ N G +VR+G+V+V STGDVVY EF D +
Sbjct: 199 TDEMHQGSPPSIMCLVEERQNT---------TGENVRIGLVSVTSSTGDVVYDEFEDTRV 249
Query: 268 RSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEV 326
R+ LE + L P ELLL + L+K T++ML + + + A +
Sbjct: 250 RTELETRIAYLKPWELLLPSKGLTKLTDEMLKLVDTYSMRGQTRTERFKSNMDYSAAFDA 309
Query: 327 MSLYENMG--EDTLSNNEDQNMDVPEQ-GNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
+S G +D S + Q R+ + I+++P V A+A ++L+Q+
Sbjct: 310 LSKASKAGGDDDAASGRKFSITKASCQLTQSRAVVAAILDLPRQVVVAIAQVFKYLEQYK 369
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
L ++ +FR S M L+A+TL LEV +N + ++ G+L +++ T T +GSRL
Sbjct: 370 LSHVLLHAKAFRRFSEKTHMLLNASTLTNLEVFQNQTTLTKKGSLWGLLDRTETTFGSRL 429
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
L+ W+ PL DR + RLDAV EI RT G + Q +L
Sbjct: 430 LKDWIGRPLVDRARLQERLDAVEEI-------RTPSENGH----------LIDQLRELLK 472
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
+ PD+ +G+++I + TP E ++ A + D E+ + S+
Sbjct: 473 RFSSKAFEYPDLAKGLSKIQNGKCTPQELGRILSAFRKIANTFKGF--DAEFGPGMRSRL 530
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
L+ L A+ P++ +L + +AA +G +L + + V A+
Sbjct: 531 LNDIL-------ATLPSIRDIVERLTENFSFDAAAKGQKEHLW-RNEDMYPAVDSRIFAI 582
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITH-----LIELPANFKVPLNWAKVNSTKK 678
+ + +L + RK + M L++ V+ IE AN VP +W V+ TKK
Sbjct: 583 TATESDLQDELKEIRKIVHMPALKYKEVTSALADEYVVEIEKSANIAVPEDWDLVSRTKK 642
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
RY S L L E L A F ++ +Y + AV LA DCL +
Sbjct: 643 YSRYRSAGAAKLLFILEQHREMLDQESEEALQDFQRKISEHYVALRHAVTQLATADCLVS 702
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIIT 798
LA +S ++ +P FVD + + I GRHP+++ + D + PN L ++IT
Sbjct: 703 LAHVSMEPSYCQPTFVDTN---VLDIKGGRHPMIELLRDDPYTPNSILLGGRDANSKVIT 759
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNMGGKS ++R VALI IMAQVGS+VPA SA L + D + RMGASD + +GRSTF+ E
Sbjct: 760 GPNMGGKSSFVRMVALIVIMAQVGSYVPAESATLGMHDALLARMGASDELMKGRSTFMVE 819
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA 918
++E + I+R+ T +SLVI+DELGRGTST DG+AIA A L++ + C VLF+THYP +A
Sbjct: 820 MSETNEIIRSATPRSLVILDELGRGTSTFDGMAIASAVLEHFVTETSCKVLFITHYPHVA 879
Query: 919 -DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
++ K+ V H+ ++ S + G + + +LY++ PG++ SFG + +LA
Sbjct: 880 TSLQEKYPFDVSVAHMGFVESEGLDGV------RTIHFLYQLKPGLA-GSFGIECGRLAG 932
Query: 978 LPPSCISRATVIAAKLEAEVSSRV 1001
LP + A + +A L+ +V RV
Sbjct: 933 LPEPLLESAAIRSAILQEQVQRRV 956
>gi|167517301|ref|XP_001742991.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778090|gb|EDQ91705.1| predicted protein [Monosiga brevicollis MX1]
Length = 1502
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 315/939 (33%), Positives = 479/939 (51%), Gaps = 147/939 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-FMTASIP 146
K TPLE+Q V++K ++PD LL++EVGYK++ FGEDA +AAK+L IY HN F +ASIP
Sbjct: 186 KLTPLEKQFVDIKCQHPDALLLLEVGYKYQLFGEDAAIAAKILSIYCAYGHNNFNSASIP 245
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
RL VH+RRLV AG+KVGV KQTETAA+K G K+ F R + ALYT+ATL ED G
Sbjct: 246 VPRLFVHMRRLVAAGYKVGVAKQTETAALKKAGDNKSKLFTREIHALYTQATL-VGEDCG 304
Query: 207 GG--EDGCGGESNYLVCVVDDDGNVGKIRNGV---------FGDGFDVRLGVVAVEISTG 255
EDG ++N LVC+++ D N K +G+ + + L + V STG
Sbjct: 305 DDFDEDGINDQNN-LVCLLEADHN--KAASGLQNTADNAPAADETAEQTLALFCVSCSTG 361
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG-PASNVRVECASR 314
+V+ +F+D RS L L L P E+L+ LS +T+K++ AY VRVE
Sbjct: 362 RLVHDQFSDDLARSQLNTRLTHLEPVEILVPANLSARTKKVIAAYCELQRVRVRVETMPV 421
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
D + GA V + Y P +++ ++++P L+V+ A
Sbjct: 422 DRYGAVGASDRVRAFY-------------ARGTTPAGPASDASLTALLDLPPLSVRCAAA 468
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
HL++F L+ + + AS +LL ++
Sbjct: 469 LFGHLEEFRLDNSIHMAASLDKFVAER-------------------------SLLWALDQ 503
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T + +G R LR+W+ HPL + I AR DA++ + +
Sbjct: 504 TKSPFGRRCLRKWLCHPLIKPSEIRARHDAIAYL------------------------LT 539
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
EP L +L +L SPD++R T I H A PS+ + +Q I
Sbjct: 540 EPME---LQGLLQTLAASPDLERIATSILHERAKPSDVVKALQTI--------------- 581
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAK-----------LLSTVNKEAADQGDLL 603
+ V + T +L + ++ PA++ +A + L +N +A + D
Sbjct: 582 --DAVATAT---EVLMAPAVASTLPALVHQAIEAMHRHFGVVRTFLFKLNVASAVKNDKA 636
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
M + F + + + V+ ++D + RK L +LE+ SVSG +LIE+
Sbjct: 637 T-MFAEDTYFPDQEQLHETVRKIHHDIDGHLLDLRKLLKQPDLEYRSVSGEEYLIEVKNK 695
Query: 664 F--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
++P +W K+++TK RY SP + L+ A E LT+ AW F+++ ++
Sbjct: 696 EVGRIPHDWLKISATKTMSRYRSPFIQHNLELRAQTQERLTLGANEAWMRFMRDLNQHFD 755
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
A + LA LDCL +L +++ + RP VD+ ++I +GRHPV + + +V
Sbjct: 756 VIMAGIGHLAMLDCLQSLTNVAQRDGYCRPEIVDEGSVLEIE--AGRHPVSELLSARQYV 813
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
N C+++ VA+I IMAQ+GS+VPA+ A L LD I+TR
Sbjct: 814 SN----------------------GCHLK-VAMIAIMAQLGSYVPATKARLSPLDAIFTR 850
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
MGA D+I Q +STF EL EAS L + +SLVI DELGRGTSTHDG+AIAYATL +L+
Sbjct: 851 MGAGDAIFQAQSTFQLELKEASDALATASPRSLVIFDELGRGTSTHDGLAIAYATLKHLV 910
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
+C+ LFVTHY +A++ T F V YH+++L + GP D +++LY++
Sbjct: 911 TRVRCLSLFVTHYTALAELATAFPEHVRCYHMAFLQEDE-DGPNDH-----ISFLYQLRQ 964
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
G++ S+G VA+LAQLP + + RA V + +LE EV+ +
Sbjct: 965 GLAARSYGLNVARLAQLPSTLLQRAGVKSEELEQEVAQK 1003
>gi|294655397|ref|XP_002770122.1| DEHA2B13574p [Debaryomyces hansenii CBS767]
gi|218511698|sp|Q6BW83.2|MSH3_DEBHA RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|199429925|emb|CAR65491.1| DEHA2B13574p [Debaryomyces hansenii CBS767]
Length = 1028
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 316/993 (31%), Positives = 513/993 (51%), Gaps = 134/993 (13%)
Query: 59 PPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRF 118
P KKP+ S P S +++KK TPLE+Q VE+K D +L I+VGYKF+F
Sbjct: 84 PEPVKKKPRTSQSLSRSKSKPQSVGSNSKKLTPLEKQFVEMKQSNLDKILAIQVGYKFKF 143
Query: 119 FGEDAEMAAKVLGI-----------YAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVV 167
FGEDA +A+K+L I Y H F SIP RL++H++RL+N G KVGV
Sbjct: 144 FGEDAVIASKILSIMLIPGNIKLDEYQH--DRFAYCSIPDNRLHIHLKRLLNQGLKVGVA 201
Query: 168 KQTETAAIKA-HGPGKAGPFGRGLSALYTKATLEAAEDVGGG---------EDGCGGESN 217
KQTETAAIK+ K+G F R ++ +YTKAT E + G +D G +
Sbjct: 202 KQTETAAIKSIDSTNKSGLFEREITGVYTKATYMGDELLTGDPNINRTSITDDEMG---D 258
Query: 218 YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLS 277
Y+ C+ D+ + I G++A++ TGD++Y FND R LE L+
Sbjct: 259 YIFCI--DESHSKDI-------------GMIAIQPITGDIIYDTFNDNVTRDELETRLVY 303
Query: 278 LSPAELLL---GQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMG 334
L+P+E+L+ +SK+T KM+ N +V R E+ + + +
Sbjct: 304 LNPSEILVINNSTEISKETIKMI-----NIVNNKVNIIHRPRRQQTDYTNEIYNFFNTID 358
Query: 335 EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
E + G H ++ P+ + I++L++F L I + ++
Sbjct: 359 EGKYK----------DLGEHY-----LLKFPNNIQSCMIELIKYLEEFKLSNIFTIISNV 403
Query: 395 RSLSGSME-MTLSANTLQQLEVLRNNSN-GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPL 452
S S + L ++T+Q LE+ +N ++ S G+L+ ++NHT T G+RLL +W++ PL
Sbjct: 404 SCFSNSKTCLVLPSSTVQALEIFQNMTDPNSNKGSLIWLLNHTRTRMGNRLLVKWISKPL 463
Query: 453 CDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGR- 511
D+ I RL + D+T F L + L +G+
Sbjct: 464 IDKAQIEERLQGIE-----------------------DLTFKFNHFIDSLKNQLDKIGKA 500
Query: 512 SPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS--KTLHSALL 569
S D+++ + ++ + + + I+ + L L + ++ + + +++HS LL
Sbjct: 501 SIDLEKNLIKVHYSSTYQLDKISRKEVYLLLKCFDDILSMIKQFGKPTNNILESIHSPLL 560
Query: 570 KRLILTASSPAVIGKAAKLLSTVNKEAADQGDL-------LNL------MIISNGQFSEV 616
R+ A LL ++ +A D +L NL IIS Q SE+
Sbjct: 561 LRIFDELMQLAKEDTVRCLLDMISADALDDSNLNDQKIKFFNLNYFKDQQIIS--QLSEI 618
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKV---PLNWAKV 673
+ + D LI + RK L L +++ S T+L+E+ V P +W K+
Sbjct: 619 SNVESLLN------DELIEI-RKMLKRPQLNYITSSKETYLVEVRNGKMVDSLPKDWIKI 671
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
N TK R+ SPE+ QL N+ L C A++++L + Y F ++ L+
Sbjct: 672 NGTKTVSRFRSPEITRLHKQLQYHNDMLIRNCDKAFNAYLFKIDNNYEFFSKIIRNLSTF 731
Query: 734 DCLHALATLSR-NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD--NFVPNDTNLHAE 790
DCL +L+ +S N N+ RP V+D + +Q+ + R+P+++ + ++ N++ ND N+ +
Sbjct: 732 DCLLSLSAVSSINSNYARPKIVEDKQIIQMK--NSRNPIIENLSVNYSNYISNDINISYD 789
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ IITGPNMGGKS Y++QVAL+ IMAQ+GS++P A + + D I+ RMGA D+I Q
Sbjct: 790 EDRVLIITGPNMGGKSTYVKQVALLVIMAQIGSYIPCDEATVGIFDSIFIRMGARDNILQ 849
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVL 909
+STF+ E+ E S+IL+N T+ SL+I+DE+GRGT T+DG+AIAY+ L+YL+E +K + L
Sbjct: 850 NQSTFMIEMLECSHILKNMTSNSLIILDEIGRGTGTNDGIAIAYSILNYLIEEPRKPLTL 909
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ---DVTYLYKVVPGVSES 966
F+TH+P + ++ KF G YH+ + H+V SKS+Q +V +LY +V GV +
Sbjct: 910 FITHFPSLHVLEDKFKGIATNYHMGF---HEV-----SKSNQEFPEVVFLYNLVRGVVGN 961
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
S+G VA+LA +P S I+ A + ++ + S
Sbjct: 962 SYGLNVAKLAGIPNSIINNAYTKSTEIRDAIES 994
>gi|296088374|emb|CBI37346.3| unnamed protein product [Vitis vinifera]
Length = 490
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/384 (65%), Positives = 293/384 (76%), Gaps = 26/384 (6%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPK----------IAATVSFSPAK 50
MGKQKQQVISRFFAPKS ++SSS+ P P I+ TV+FSP+K
Sbjct: 1 MGKQKQQVISRFFAPKSKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK 60
Query: 51 RKVVSSLFPP-KTPKKPKLSPHTLNP---------IPTPSSQTTH-----NKKYTPLEQQ 95
R S + P K PK PK+S H ++P + PSS T KYTPLEQQ
Sbjct: 61 RLPSSHVSPSTKPPKAPKIS-HPIDPSLHQKFVQKLLQPSSSTPTKLPLPTTKYTPLEQQ 119
Query: 96 VVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVR 155
VV+LK KYPDVLLM+EVGY++RFFGEDAE+AA+VLGIYAH+DHNF+TASIPTFRLNVHVR
Sbjct: 120 VVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLGIYAHVDHNFLTASIPTFRLNVHVR 179
Query: 156 RLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGE 215
RLV+AGFKVGVVKQTETAAIKAHG K GPF RGLSALYTKATLEAAEDVGGGE+ CG
Sbjct: 180 RLVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAEDVGGGEEECGSY 239
Query: 216 SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVL 275
+NYLVCVV+ +V ++ G GFDVR+G+VAVE+STGDVV+G+FND F+R+GLEAV+
Sbjct: 240 NNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGKFNDNFMRAGLEAVI 299
Query: 276 LSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGE 335
LS+SPAELLLG PLSKQTEK+LLAYAGPASNVR+E SRDCF GGALAEVMSLYEN+ E
Sbjct: 300 LSMSPAELLLGYPLSKQTEKLLLAYAGPASNVRLERTSRDCFSDGGALAEVMSLYENLSE 359
Query: 336 DTLSNNEDQNMDVPEQGNHRSAIE 359
D+ +++ N +V EQ NH AIE
Sbjct: 360 DSRVDHQVDNTEVMEQENHCLAIE 383
>gi|296085713|emb|CBI29513.3| unnamed protein product [Vitis vinifera]
Length = 470
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/385 (64%), Positives = 289/385 (75%), Gaps = 26/385 (6%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPP------------KIAATVSFSP 48
MGKQKQQVISRFFAPKS ++SS + P P KI+ TV+FSP
Sbjct: 1 MGKQKQQVISRFFAPKSKAPSSSSFSIPSSPSPSPSPSPSSLPNPPTPPPKISTTVTFSP 60
Query: 49 AKR----KVVSSLFPPKTPK-----KPKLSPHTLNPIPTPSSQTTH-----NKKYTPLEQ 94
+KR V S PPK PK P L L + PSS T KYTPLEQ
Sbjct: 61 SKRLPSSHVSPSTKPPKAPKISHPIDPSLHQKFLQKLLEPSSSTPTKLPLPTTKYTPLEQ 120
Query: 95 QVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHV 154
QVV+LK KYPDVLLM+EVGY++RFFGEDAE+AA+VL IYAH+DHNF+TASIPTFRLNVHV
Sbjct: 121 QVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLAIYAHVDHNFLTASIPTFRLNVHV 180
Query: 155 RRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGG 214
RRLV+AGFKVGVVKQTETAAIKAHG K GPF RGLSALYTKATLEAAEDVGGGE+ CG
Sbjct: 181 RRLVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAEDVGGGEEECGS 240
Query: 215 ESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAV 274
+NYLVCVV+ +V ++ G GFDVR+G+VAV++STGDVV+GEFND F+R+GLEAV
Sbjct: 241 YNNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVKVSTGDVVHGEFNDNFMRAGLEAV 300
Query: 275 LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMG 334
+LS+SPAELLLG PLSKQTEK+LLAYAGPASNVRVE SRDCF GGALAEVMSLYEN+
Sbjct: 301 ILSMSPAELLLGYPLSKQTEKLLLAYAGPASNVRVERTSRDCFSDGGALAEVMSLYENLS 360
Query: 335 EDTLSNNEDQNMDVPEQGNHRSAIE 359
ED+ ++++ N +V EQ NH AIE
Sbjct: 361 EDSRADHQVDNTEVMEQENHCLAIE 385
>gi|358057364|dbj|GAA96713.1| hypothetical protein E5Q_03384 [Mixia osmundae IAM 14324]
Length = 1095
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 304/913 (33%), Positives = 479/913 (52%), Gaps = 79/913 (8%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K+YTPLEQQ ++LK D +L EVGYK +F+ EDA +A+K+L I F +A +P
Sbjct: 208 KEYTPLEQQWLDLKAANKDTVLAFEVGYKIQFWNEDALIASKILHIANFQGGKFNSAMVP 267
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
T RL +HV+RLV AG+KVG+V+Q ETAA+K G + F R ++ YT +T +++
Sbjct: 268 THRLMLHVKRLVMAGYKVGIVRQVETAALKKVGSTRNQLFKRQITERYTLSTW--VDELD 325
Query: 207 GGE-DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
E G ++ +V V++D G R DG V +V TG++++ F+D
Sbjct: 326 SSELSSEQGRASTIVVVLED----GMTRT----DG-KTAFAVCSVTPGTGEIIWDSFDDD 376
Query: 266 FLRSGLEAVLLSLSPAELLLG-QPLSKQTEKML--LAYAGPASNVRVECASRDCFIGGGA 322
LR LE L+ L+P E+++ + LS QTE ++ L AS R
Sbjct: 377 HLRHALETRLMHLAPGEVIVPIEKLSSQTESVIATLVNNREASQPRGRIDRVALMSTSKH 436
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPE-QGNHRSAI---EGIMNMPDLAVQALALTIRH 378
+ ++M YE Q DV + G+H I E I +P+ AL++ I
Sbjct: 437 VEKLMEFYE------------QPKDVIDLDGDHVEPIISMEIIKALPETVKVALSVLIDQ 484
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
F L+ I SF MTL+ TL+ LE+ +N ++GS GTL ++ T T+
Sbjct: 485 CALFFLQNIFLRPKSFLPFGRRAHMTLTGQTLRNLEIFQNQTDGSAKGTLWSALDSTQTV 544
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
+G R+L+ W+ PL D + RL AV+EI S +S +G+
Sbjct: 545 FGRRMLKHWLAAPLIDPQALQERLKAVTEILTS-----SSFVIGK--------------- 584
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
L +VLT L PD++RG+ R+ +R T E ++ A+ +LQ +
Sbjct: 585 ---LRTVLTGL---PDLERGLCRVHYRKITLPELSKMLSALSRVSGELQSMA------NP 632
Query: 559 VTSKTLHSALLKRLILT-ASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
+ + S LLKR I T A S ++I + L+ +N A + ++ + V
Sbjct: 633 SAGEAVRSPLLKRAINTVAQSRSMI---ERFLNLLNLPACQESRKESMFKDVEARAPAVF 689
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAKVNS 675
A+ + + + ELD + RK L L+++ V +LIE+ + +P +W ++N
Sbjct: 690 DAQDVISTIEFELDQHLAELRKLLKKPRLKYIDVHLEKYLIEISRSDAASIPADWIRING 749
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
T RY SP + L + A + E + A ++L E GG Y F+A ++ LA LDC
Sbjct: 750 TNTNYRYRSPRMTELLAERAQSIERRDLAATEACHTYLDELGGEYVTFRAVIRTLAELDC 809
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY-C 794
L +LA S + +PV + D++ V +H+ GRHPV++ IL D FV ND ++ ++
Sbjct: 810 LLSLARTSSQPGYCKPV-LQDNDTVTLHVTGGRHPVIERILSDPFVANDVSMDDQQGMRT 868
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
++TG NM GKS + R AL+ I+AQ+G +VPASS L + D I TRMGA+D I GRST
Sbjct: 869 MLLTGSNMSGKSSFARMCALLVILAQIGCYVPASSMRLSIFDNILTRMGAADDILHGRST 928
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E++E++ I+R+ T++S V++DELGRGTS DG +AYA L YL H+K +++FVTH+
Sbjct: 929 FMVEMSESADIVRSATSRSFVLLDELGRGTSDVDGRILAYAILRYLHAHRKGLIIFVTHF 988
Query: 915 PK-IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
++++ ++F +YH+ L + S + + +LYK+ G++ S G V
Sbjct: 989 HSLVSELCSEFPQDAASYHMQVLET-------SGSSSERIVFLYKLAAGLASRSHGIHVG 1041
Query: 974 QLAQLPPSCISRA 986
++A LP + RA
Sbjct: 1042 KIAGLPDRLLERA 1054
>gi|336379827|gb|EGO20981.1| hypothetical protein SERLADRAFT_441366 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1060
Score = 454 bits (1169), Expect = e-124, Method: Compositional matrix adjust.
Identities = 315/930 (33%), Positives = 489/930 (52%), Gaps = 90/930 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTP E+QV++ P +LM+E GYK+ F+ + A++A+K LGI ++ N TAS+P
Sbjct: 202 YTPSEKQVLQFIRDNPGTMLMVETGYKYYFYEDSAKIASKELGIVCYMRRNLWTASVPVH 261
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
R + + RL++ G KVG+++Q ETAA+K + F R L+ LYT T +++
Sbjct: 262 RRDSY--RLLSQGHKVGIIEQVETAALKKVSENRNTLFQRKLTHLYTATTY--VDEMDSV 317
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D S L+C+V+ + + DV +G++++ TGDV+ + D ++R
Sbjct: 318 DDLDKHTSPSLLCLVEHSKDDTR--------SNDVSIGMISISPRTGDVLPPK--DTYMR 367
Query: 269 SGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPA---SNVRVECASRDCFIGGGALA 324
LE L+ PAELLL + LSK TEK+L Y + S R+E + D A
Sbjct: 368 IDLETRLVHTRPAELLLPHEGLSKFTEKLLTHYTESSTENSKPRLERFN-DTLTYTEAFD 426
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
V Y + S N+D PE+ + + + P V LA I++L F +
Sbjct: 427 FVSGFYADK-----SKGRSGNVD-PEK-----LLASVTDFPQQVVIVLAHAIKYLSAFSI 475
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
F + M L+ NTL LE+ RN ++ + G+L+ I++ T T +G+RLL
Sbjct: 476 ADAFLGIRFFMRFTNRTHMLLNGNTLVNLEIYRNETDFTTKGSLMWILDRTTTKFGARLL 535
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
+ WV PL + ++ R+DAV EI S +SE + L
Sbjct: 536 KSWVGRPLVHKEILEERMDAVEEIISS-----SSERL------------------VALKQ 572
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ--QLHIDGEYREKVTSK 562
VL L PD+ +G+ RI + TP E ++ A + + DG +R K
Sbjct: 573 VLKKL---PDLSKGLCRIQYGKCTPQELATLLLAFKKVATVFEGCKDSADGGFRAK---- 625
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG--DLLNLMIISNGQFSEVARAR 620
LLK L++ S P + LL +++ + A G D L ++A A
Sbjct: 626 -----LLKELVI--SLPKLKQPVMDLLGSISLQKAFDGRKDTLWSDPDKYPALDDMAMAI 678
Query: 621 KAVQSA-KEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA--NFKVPLNWAKVNSTK 677
+AV++ KEEL S+ + +K L L++ + +G +L+EL N +VP NW + TK
Sbjct: 679 QAVEADLKEELKSIRKVLKKPL----LQWTTFAGEEYLVELKKTENREVPPNWFIASRTK 734
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQALAALDCL 736
RY +P+V D+ A E L A++SFL + +Y + AV LA DCL
Sbjct: 735 YLTRYLTPDVKKKRDERARYMESLQAEAIKAFESFLNDIVQDHYTVIRDAVNKLAIADCL 794
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQI 796
+ A ++ +VRP F D+ ++ I GRHP+++ + D FVPN ++ + +I
Sbjct: 795 LSFAQVALQDGYVRPQFTDED---KLEIIEGRHPMVEALRSDPFVPNSIDMGGDEPSSKI 851
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNMGGKS +R VALI IMAQ+GS+VPA SA L +LD I TRMGASD + +GRSTF+
Sbjct: 852 ITGPNMGGKSSAVRMVALISIMAQIGSYVPAKSARLGLLDSILTRMGASDELDRGRSTFM 911
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
E+ S IL+ T++SLVI+DELGRGTST DG+A+A+A L++L+ + C LF+THYP
Sbjct: 912 VEMAGTSDILQAATSRSLVILDELGRGTSTVDGMAVAHAVLEHLVRNVHCKTLFITHYPL 971
Query: 917 IA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
+A D++ KF ++ H+ Y ++ G +D+T+LY+++PG++ SFG + A+L
Sbjct: 972 VAVDLERKFPNAIQNLHMGYTAETRINGT------RDITFLYRLIPGIAAESFGVECARL 1025
Query: 976 AQLPPSCISRATVIAAKLEAEVSSR-VQNR 1004
A + + AT + + + R QNR
Sbjct: 1026 AGVSEEILQVATERSQSYQCTIEKRHAQNR 1055
>gi|254566783|ref|XP_002490502.1| Mismatch repair protein [Komagataella pastoris GS115]
gi|238030298|emb|CAY68221.1| Mismatch repair protein [Komagataella pastoris GS115]
gi|328350893|emb|CCA37293.1| DNA mismatch repair protein mutS [Komagataella pastoris CBS 7435]
Length = 1004
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 318/982 (32%), Positives = 496/982 (50%), Gaps = 116/982 (11%)
Query: 68 LSPHTLNPIPTPS--SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
++P + I P ++++ + TPLEQQ + LK + D +L I+VGYK++FFGEDA++
Sbjct: 75 VTPESAKKIEKPKKRAKSSTSSNLTPLEQQFISLKANHKDKILAIQVGYKYKFFGEDAKV 134
Query: 126 AAKVLGIY-----AHLDHN---------FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTE 171
A+ +L I LD N + S+P RL++H++RL+N G KVGVVKQ E
Sbjct: 135 ASGILDIMFIPGKVSLDPNNSEETDYDRYAYCSVPDTRLHIHLKRLLNKGLKVGVVKQME 194
Query: 172 TAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGK 231
TAAIK++ K+ F R L+ +YT AT + E G + +C +
Sbjct: 195 TAAIKSNSANKSTLFERKLTNVYTSATYIDDTNEQDLESNKAGSFIFSICEKKN------ 248
Query: 232 IRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSK 291
RL V+AV + ++VY F D +R+ L L L PAE + LSK
Sbjct: 249 ------------RLSVMAVNLINSEIVYDSFEDTQIRTNLRTRLQYLDPAEYVTIGELSK 296
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGA-----LAEVMSLYENMGEDTLSNNEDQNM 346
+TE+ + ++ S R R A L E +S N + L
Sbjct: 297 ETEQCISSFIMEKSIGRNSMTIRRIPYQLDAQYLDKLTEFVSASSNPVDSAL-------- 348
Query: 347 DVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTL 405
+E I +P + +L +FGL + L ++ S S + M L
Sbjct: 349 ----------LLEFITELPSHLQMCTYGLVEYLTEFGLSSVFLLKRNYHRFSDSNKYMIL 398
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
+NTL+ +E+L NN+NG E G+LL +++HT T +G RLLR+W+T PL DR I R A+
Sbjct: 399 DSNTLKSIEILNNNTNGEEVGSLLWLLDHTRTKFGYRLLRKWITKPLIDREQILNRSAAI 458
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
+++ S +VE ++ L + D++R ++R++
Sbjct: 459 RDLSLHFKS-----------------ILVEKLCFF--------LSNTNDLERSLSRVYFG 493
Query: 526 TATPSEFIAVMQA---IL-----YAGKQLQQLHIDGEY-REKVTSKTLHSALLKRLILTA 576
T E V++ IL Y+ ++ QL ++ RE+ TLH L
Sbjct: 494 KTTRKEMYLVLKKFNEILAFMQNYSKAEIDQLQLESSLLREEFL--TLHQLATSELKSFT 551
Query: 577 SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
+ +I AA + E+ ++ + N + ++A ++ VQ + L+ +
Sbjct: 552 AYLGMINSAAAM-----DESDEKTHVTNYFSSDFFDYDKIAVEKRKVQELETLLEKELIN 606
Query: 637 CRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
R+ L ++E++S + +LIE+ + +P NW K+N TK R+ +PE QL
Sbjct: 607 IRQILKRPSMEYISNNKEPYLIEVRNSTVKSLPKNWIKINGTKTVSRFRTPETTKLYKQL 666
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNK-NFVRPVF 753
+ + I + + SFL V ALA LDCL +L S N N +P
Sbjct: 667 QYLEDLVVIANESCFSSFLHSIKSQRPYLSRVVSALATLDCLISLTASSFNGVNNCQPEL 726
Query: 754 VDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
VD P+ I + R+PV++++ ++ ND ++ + IITGPNMGGKS +IRQ+A
Sbjct: 727 VDS--PM-IQLEGSRNPVIESLTKTGYIDNDFSMSQKENRVSIITGPNMGGKSSFIRQIA 783
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
LI IMAQ+G VPA++A+L V D IY RMGA D I G+STF EL+E S I+ NCT +S
Sbjct: 784 LIVIMAQIGCSVPATNAKLGVFDSIYIRMGAHDDIIGGQSTFQVELSECSTIINNCTPKS 843
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFVTHYPKIADIKTKFTGSVGTY 931
LV++DE+GRGTST DG +IAY+ LDYL+ K VLF+TH+P + I+ K+ V +
Sbjct: 844 LVLLDEIGRGTSTVDGYSIAYSILDYLISEPSKSPFVLFITHFPTLHVIEQKYGTIVKNF 903
Query: 932 HVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAA 991
H+ Y+ K G + D + +LYK+V GV E+S+G VA++A +P IS+A I+
Sbjct: 904 HMGYMVEKK-EGDL---QDPVLVFLYKLVEGVCENSYGLNVARMALIPEEVISKAFEISR 959
Query: 992 KLEAEVSSRVQNRSAKRDLLVK 1013
+L+A++ S +RDL+ K
Sbjct: 960 ELQAKMEF-----SRRRDLIRK 976
>gi|390598434|gb|EIN07832.1| hypothetical protein PUNSTDRAFT_121053 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 951
Score = 447 bits (1151), Expect = e-122, Method: Compositional matrix adjust.
Identities = 308/954 (32%), Positives = 480/954 (50%), Gaps = 120/954 (12%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
PS QT +TPLE+QV++LK P LLM+ VGYK++F+GEDA++A+K LGI
Sbjct: 30 PSGQT-----WTPLEEQVLKLKEDNPGTLLMVAVGYKYKFYGEDAKIASKELGIACFPQR 84
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
NF+ A+ P FR ++V++L+ G++VG+V QTETAA+KA G + F RGL+ LYT T
Sbjct: 85 NFLVATAPIFRREIYVKKLLAQGYRVGIVDQTETAALKAAGGTRNSLFARGLTNLYTSTT 144
Query: 199 ----LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIST 254
L + +D G G S L+C+V+ G G VR+G++ + ST
Sbjct: 145 YVDELNSLDDSESG--GSAVASGPLMCLVEQLA-------GGMGKDDRVRIGMICISPST 195
Query: 255 GDVVYGEF----------------NDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKML 297
GDVV+ EF +D +R +E L+ P+E+LL G LS +EK L
Sbjct: 196 GDVVWDEFYGEGYVIASTSYLYVHSDTHMRIEVETRLVHTKPSEILLSGSKLSDPSEKTL 255
Query: 298 LAYA-GPASNV--RVECASRDCFIGGGALAEVMSLYENMGEDT--LSNNEDQNMDVPEQG 352
L + GP R+E E M+ + T S ++ +
Sbjct: 256 LQFVRGPTGGTKPRIE-----------RFEEPMTYTDAFSYVTEFFSRDDHHPSTSSQTA 304
Query: 353 NHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQ 412
+E I + P + ALA I++L F + ++ F +G M L+ T+
Sbjct: 305 RENRLVEAIADFPHTVIIALARAIKYLSAFDVADVLREINFFTRFAGRAHMLLNGKTMTN 364
Query: 413 LEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESM 472
LE+ RN + + G+LL +++HT T +GSRLLR W+ PL D ++ R DA+ EI +
Sbjct: 365 LEIYRNETTYAVKGSLLWVLDHTKTKFGSRLLRSWIGRPLMDETILKERTDAIEEI---L 421
Query: 473 GSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF 532
GS TS + +L +L L PD+ +G+ RI + TPSE
Sbjct: 422 GS--TSGGL------------------VMLKDLLKGL---PDLAKGLCRIQYGKCTPSEL 458
Query: 533 IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTV 592
A++ + E K S+LL +I S P + ++L +V
Sbjct: 459 AALLVHFNRVSTTFRPTSDPSEVGFK-------SSLLNEII--HSLPKLHKPMQQILGSV 509
Query: 593 NKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
+ + + + M I + ++ +A R A+ + EL + +K L +L + + +
Sbjct: 510 SMDMLKKARK-DQMWIDSDKYPAIADRRAAIDMIEGELADELKRVQKLLKRPSLRWSTWN 568
Query: 653 GITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
G +L+E+ + VP +W +N+TK RY P V + + A E L A+
Sbjct: 569 GEEYLVEIRKDESQLVPPSWNVLNTTKLLRRYRIPLVKQKIQERAQYQEALQAEAEKAYL 628
Query: 711 SFLKEFG-GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRH 769
+FL E +YA + + LA DCL +LA ++ + +V+ F + + I GRH
Sbjct: 629 AFLAEIARDHYAVMREVINKLATADCLLSLAHVASQEGYVKAEFTQED---VLEIEDGRH 685
Query: 770 PVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
P+++ + + FVPN L A ++ITGPNMGGKS +R ALI +MAQ+GS+VPAS
Sbjct: 686 PIVEALSTNPFVPNTVRLGAGSPRSKVITGPNMGGKSSCVRMTALIALMAQIGSWVPASR 745
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
+ +LDGI+TRMGA+D + +GRSTF+ EL+E ++++ T +SLVI+DELGRGTST+DG
Sbjct: 746 VRMRMLDGIFTRMGAADDLARGRSTFMVELSETQHVMQAATDRSLVILDELGRGTSTYDG 805
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
+AIA A L +LLE C LF+THYP +A +++ KF + H+ ++ +
Sbjct: 806 MAIASAVLHHLLESTSCKTLFITHYPLVARELEKKFPTELENLHMGFIEDTR-------- 857
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
SFG + +LA +P S + A A + E+ +R +
Sbjct: 858 ------------------SFGVECGRLAGVPESVLQVAAKRAEDMRVELDARAR 893
>gi|448116813|ref|XP_004203106.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
gi|359383974|emb|CCE78678.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
Length = 1008
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 304/994 (30%), Positives = 489/994 (49%), Gaps = 155/994 (15%)
Query: 58 FPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFR 117
+P K PK+ N + S +K TPLE+Q +ELK D +L I+VGYK++
Sbjct: 79 YPSKRPKQ-----QNGNSVSGNSKSKPDTRKLTPLEKQFLELKANNKDKVLAIQVGYKYK 133
Query: 118 FFGEDAEMAAKVLGIYAHLDHN---------FMTASIPTFRLNVHVRRLVNAGFKVGVVK 168
FF EDA +A+KVL I N F SIP RL++H+RRL++ G KVGVVK
Sbjct: 134 FFCEDAVIASKVLNIVLVPGANNSCDTSSDRFAYCSIPDNRLHIHLRRLLSYGLKVGVVK 193
Query: 169 QTETAAIKA-HGPGKAGPFGRGLSALYTKATLEAAED-------VGGGEDGCGGESNYLV 220
Q ETA+IK+ K+G F R ++ +YTKAT ED + ED G +Y+V
Sbjct: 194 QMETASIKSVESDNKSGLFVREMTGVYTKATYLGDEDPPRNQNDISMNEDD-EGVGDYIV 252
Query: 221 CVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSP 280
C+ D D ++G+VAV+ +TGD++Y F+D R+ LE L+ L+P
Sbjct: 253 CI----------------DASDKKVGIVAVQPATGDIIYDTFDDDSARNELETRLIFLNP 296
Query: 281 AELLL-GQPLSKQTEKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMG 334
+E+++ G + K ++ + NV + E R ++ S E++G
Sbjct: 297 SEIIIIGDEEANIGLKKMVNIITKSGNVISKKRKSESDYR------SSINTFFSKSEDIG 350
Query: 335 EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
+ L + P + ++ + +L++F L + + +
Sbjct: 351 QYYL-----------------------LKFPSNILSCISELLEYLQEFKLSNMFLIKDNM 387
Query: 395 RSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLC 453
S S + + M L +TLQ LEV +N+++ S GTL ++++T T G RLL++WV PL
Sbjct: 388 SSFSNAKKYMHLPGSTLQALEVFQNSTDYSTKGTLFWLLDYTKTKMGKRLLKKWVAMPLV 447
Query: 454 DRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSP 513
RNLI RLDA+ +++ ++ S L + + L R+
Sbjct: 448 SRNLIQDRLDAIDDLSRGYNNFIDS-----------------------LKNKIVKLSRTG 484
Query: 514 -DIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID-------------GEYREKV 559
D+++ + ++ + ++ I + L L++D +++ V
Sbjct: 485 LDLEKSLIKVHYSSSHNVSKIDKKEIYLLL------LNLDEISSLFRSFSSQIALFKDSV 538
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN-------GQ 612
TS+ L L L ++ S+ KLL + A D + N G
Sbjct: 539 TSRLLEDILQDILDISESTTV-----EKLLKYITPSALDNNQFEQKVYFFNLQNYPDEGI 593
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK----VPL 668
SE+ + + + EEL+ + R QL +L +++ +LIE+ N K +P
Sbjct: 594 LSELEKIKDIEKKLDEELEKI----RVQLNRPHLNYVTNLKDAYLIEV-RNGKMINDIPS 648
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
+W K+N TK R+ SPEV +L N+ L C A+ FLKE YA +
Sbjct: 649 DWIKINGTKTVSRFRSPEVTKLYKELQYHNDTLLRNCDIAYGRFLKEVDENYASLKTLSD 708
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI--LLDNFVPNDTN 786
+A DCL +L LS + + +P D + I GRHP+++ + ++ ND +
Sbjct: 709 VIARFDCLFSLCDLSSSYGYSKPSLTDSFSSIMIE--KGRHPIIEKLGSSTQGYIANDIH 766
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
+ + IITGPNMGGKS Y++QVAL+ +MAQ+G ++P A + + D I+ RMGA D
Sbjct: 767 MSKDNNRVLIITGPNMGGKSSYVKQVALLILMAQIGCYIPCDKATIGIFDSIFVRMGAKD 826
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KK 905
I + +STF+ EL E S I+R+ T++SL+I+DELGRGT T+DG+AIA++ L+YL+E+ K
Sbjct: 827 DILRNKSTFMTELQECSNIIRSMTSRSLIILDELGRGTGTNDGIAIAFSVLNYLIENPAK 886
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ---DVTYLYKVVPG 962
+ LF+TH+P + + + G V YH+ Y+ ++ K DQ ++ +LY +V G
Sbjct: 887 PLTLFITHFPSLHVFEQNYIGIVSNYHMGYVENY--------KKDQEFPEILFLYNLVKG 938
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
V S+G VA LA +P S + A A + E
Sbjct: 939 VVSKSYGLNVANLAGIPNSIVRYAFQKAEDMRKE 972
>gi|406601346|emb|CCH47006.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 1047
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 286/949 (30%), Positives = 486/949 (51%), Gaps = 109/949 (11%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA--------------H 135
TPL+QQV +LK + D +L I+VGYK++F+ EDA K+L I
Sbjct: 158 TPLDQQVKDLKLLHLDKILAIQVGYKYKFYCEDAVKVHKILNIMLVPGKINIIDESPTDK 217
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
L + SIP RL++H++RL++ G K+G+V Q ET+AIK+ + F R LS ++T
Sbjct: 218 LYNKLAYCSIPEPRLHIHLQRLLDRGLKIGIVDQIETSAIKSVESKNSALFKRRLSNVFT 277
Query: 196 KATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTG 255
K+T ++V +D N L+ +V++ + +V + +V+++ TG
Sbjct: 278 KSTYIEYDEVNQEKDK---NINSLLSIVEESVDQND----------NVLITLVSIQPLTG 324
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELL-LGQPLSKQTEKMLLAYAG-PASNVRVECAS 313
+++Y F D FLR+ LE LL + P E + +S+ TE + +SN+R+
Sbjct: 325 EIIYDTFQDDFLRNELETRLLHMEPIEFIYFENDISELTESCFQKFISINSSNIRIN--- 381
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA 373
++ L + E L+ D +D P+ E I +
Sbjct: 382 -----------KIPILKKKFFESYLN---DYVLDNPK------LFEFISEQSKEFQTCCS 421
Query: 374 LTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
L I +LK+F L+ + ++ + M L++N+L LE+ N++N ++G+LL +M+
Sbjct: 422 LLIDYLKEFQLDSSFKIVTNYSNFIQKNHMILNSNSLTNLEIFINSTNNEQFGSLLWLMD 481
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G RLLR+W+++PL DR I R DAV I
Sbjct: 482 HTRTKFGYRLLRKWISNPLIDREQIEKRFDAVENI------------------------- 516
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID- 552
+ F + L ++ L SPD+++ + R+ + E + L+ +++ +L I
Sbjct: 517 -QSNFNHFLENLANLLKNSPDLEKILNRLHYGKVKRKE----LYIFLFKFEEISKLIIKF 571
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA--DQGD-----LLNL 605
G++ L S+ LK+L + K + +S +N A D D NL
Sbjct: 572 GKFE---ILNNLKSSYLKQLFTQLIEISESLKISNYVSMINSPNAMDDHNDDHILKYFNL 628
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK 665
+ Q E+ + + K+E + R L ++++++ S +L+E+ A
Sbjct: 629 NTLKINQ-DEIITQDIEISNIKDEFQKELQNVRDFLKRPSMDYVTSSREPYLVEIRAGLS 687
Query: 666 --VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
VP +W K+N +K RY +P+++ + L E C + + F+++ Y E
Sbjct: 688 RIVPKDWVKINGSKLVSRYRTPQIIKLMKLLEYHMELYLKACHSVFQRFVQDLDKNYTEL 747
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
++ LA DCL ++ T S + N+ RP FVD+ I I +GR+P+++ L+ +VPN
Sbjct: 748 NQFIKILAQYDCLLSITTTSSSLNYSRPKFVDEQ---IIQIQNGRNPIIEQ--LNTYVPN 802
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D ++++ + C IITGPNMGGKS Y+++VAL+ IMAQ G F+P SA L V + I TRMG
Sbjct: 803 DIDMNSSQSRCFIITGPNMGGKSSYVKKVALLIIMAQCGCFIPCESATLGVFNSILTRMG 862
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL-E 902
+ D + +G STF E+++ +++NC +SL+I+DE+GRGT T DG++IA + L YL+ E
Sbjct: 863 SKDDLIKGESTFFIEMSQILNVIQNCHGKSLIILDEVGRGTGTIDGISIASSILQYLMTE 922
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
+K ++LF+TH+P I + KF+ + +H+ Y+ K VT+LY +VPG
Sbjct: 923 TEKSLILFITHFPSICKLSKKFS-KIKNFHMGYIEEKKTENDWPK-----VTFLYNLVPG 976
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL 1011
++++S+G VA+LA + I A I+ K + +V S QN + +R L+
Sbjct: 977 IAKNSYGLNVAKLASINDEIIHNAFEISRKRQQQVES-AQNLANERKLV 1024
>gi|448119263|ref|XP_004203689.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
gi|359384557|emb|CCE78092.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
Length = 1008
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 307/988 (31%), Positives = 488/988 (49%), Gaps = 145/988 (14%)
Query: 59 PPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRF 118
P K PK+ N + S +K TPLE+Q +ELK D +L I+VGYK++F
Sbjct: 80 PSKRPKQ-----QNGNHVIGNSKSKPDTRKLTPLEKQFLELKANNRDKILAIQVGYKYKF 134
Query: 119 FGEDAEMAAKVLGIYAHLDHN---------FMTASIPTFRLNVHVRRLVNAGFKVGVVKQ 169
F EDA +A+KVL I N F SIP RL++H+RRL++ G KVGVVKQ
Sbjct: 135 FCEDAVIASKVLNIVLVPGENNSCDTSSDRFAYCSIPDNRLHIHLRRLLSQGLKVGVVKQ 194
Query: 170 TETAAIKA-HGPGKAGPFGRGLSALYTKATLEAAED-------VGGGEDGCGGESNYLVC 221
ETA+IK+ K+G F R ++ +YTKAT ED + ED G +Y+VC
Sbjct: 195 METASIKSVESDNKSGLFVREMTGVYTKATYLGDEDPPRNQNDISMNEDD-EGVGDYIVC 253
Query: 222 VVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPA 281
+ D D ++G+VAV+ +TGD++Y F+D R+ LE L+ L+P+
Sbjct: 254 I----------------DASDKKVGLVAVQPATGDIIYDTFDDDSARNELETRLIFLNPS 297
Query: 282 ELLL--GQPLSKQTEKM--LLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDT 337
E+L+ + + +K+ ++ +G N + + S ++ S E++G+
Sbjct: 298 EILIIGDEEIDIGLKKIVKIITKSGNVINKKRKSESD----YRSSINTFFSKSEDIGQYY 353
Query: 338 LSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSL 397
L + N S I +++ +L++F L + + + S
Sbjct: 354 L---------LKFASNILSCISELLD--------------YLQEFKLSTMFLIKDNISSF 390
Query: 398 SGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRN 456
S + + M L +TLQ LEV +N+++ S GTL ++++T T G RLL++WV PL RN
Sbjct: 391 SNAKKYMHLPGSTLQALEVFQNSTDYSTKGTLFWLLDYTKTKMGKRLLKKWVAMPLVLRN 450
Query: 457 LISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSP-DI 515
LI RLDA+ +++ ++ S L + + LGR+ D+
Sbjct: 451 LIQDRLDAIDDLSRGYNNFIDS-----------------------LKNKIVKLGRAGLDL 487
Query: 516 QRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID-------------GEYREKVTSK 562
++ + ++ + ++ I + L L++D +++ V S+
Sbjct: 488 EKSLIKVHYSSSHNVSKIDKKEIYLLL------LNLDEISSLFRSFSSQIALFKDSVNSR 541
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN-------GQFSE 615
L L L L+ S+ KLL + A D + N G +E
Sbjct: 542 LLADILQDVLDLSESTV-----VEKLLKYITPSALDNNQFEQKVYFFNLQNYPDEGILTE 596
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK----VPLNWA 671
+ + + + EELD + R QL +L +++ +LIE+ N K +P +W
Sbjct: 597 LEKIKDIEKKLDEELD----IIRVQLNRPHLNYVTNLKDAYLIEV-RNGKMINDIPSDWI 651
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
K+N TK R+ SPEV +L N+ L C A+ FLKE YA + +A
Sbjct: 652 KINGTKTVSRFRSPEVTKLYKELQYHNDALLRNCDIAYGRFLKEVDENYASLKTLSDVIA 711
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI--LLDNFVPNDTNLHA 789
DCL +L LS + + +P D + I GRHP+++ + ++ ND +
Sbjct: 712 KFDCLFSLCDLSSSYGYSKPSLTDSFSSIMIE--KGRHPIIEKLGSSTQGYIANDIRMSK 769
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ IITGPNMGGKS Y++QVAL+ +MAQ+G +VP A + + D I+ RMGA D I
Sbjct: 770 DNNRVLIITGPNMGGKSSYVKQVALLILMAQIGCYVPCDKATIGIFDSIFVRMGAKDDIL 829
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMV 908
+ +STF+ EL E S I+R+ T++SLVI+DELGRGT T+DG+AIA++ L+YL+E K +
Sbjct: 830 RNKSTFMTELQECSNIIRSMTSRSLVILDELGRGTGTNDGIAIAFSVLNYLIEDSAKPLT 889
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF+TH+P + + + G V YH+ Y+ ++K + +V +LY +V GV S+
Sbjct: 890 LFITHFPSLHVFEQNYIGIVSNYHMGYVENYK-----KGQEFPEVLFLYNLVKGVVSKSY 944
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAE 996
G VA LA +P S + A A + E
Sbjct: 945 GLNVANLAGIPNSIVRYAFQKAEDMRKE 972
>gi|361130212|gb|EHL02066.1| putative DNA mismatch repair protein msh3 [Glarea lozoyensis 74030]
Length = 1041
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 282/820 (34%), Positives = 444/820 (54%), Gaps = 94/820 (11%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +++K K+ D LL++EVGYKF+FFGEDA AAK L I AH
Sbjct: 209 TPMEIQFLDIKRKHMDTLLIVEVGYKFKFFGEDARNAAKELSIVCIPGKFRFDEHPSEAH 268
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIPT RL VH +RLV+AG+KVGVV+Q ETAA+K G + PF R L+ ++T
Sbjct: 269 LDR-FASASIPTHRLPVHAKRLVSAGYKVGVVRQIETAALKKAGDNRNTPFVRKLTNVWT 327
Query: 196 KATLEAAEDVGGGED------GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
K T ED+ G E G + YL+C+ + +G V +G++A
Sbjct: 328 KGTY--IEDIDGLEQPADAPSGGAPSTGYLLCITESKAKG-------WGTDEKVDVGILA 378
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN--- 306
V+ +TG+++Y F DGF+R +E LL ++P E L+ L+K ++K++ +G +N
Sbjct: 379 VQPNTGNIIYDTFEDGFMRGEIETRLLHIAPCEFLIVGELTKASDKLIQHLSGGNTNLFG 438
Query: 307 --VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
+R+E R + A + V Y D L N++ +V EQ + ++ ++ +
Sbjct: 439 DRIRIERMPRKKTMAAEAHSHVTQFYA----DKLKNSQSTG-NVREQ----TLLDKVLKL 489
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
P+ L+ I H+ ++GLE + L F+S S M L+ NTL LE+ N ++ +E
Sbjct: 490 PEEVTICLSAMITHMTEYGLEHVFDLTKYFQSFSARSHMLLNGNTLTSLEIYHNQTDYTE 549
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L ++ T T +G RLLR WV PL D+ + R+ AV E+ + + +
Sbjct: 550 KGSLFWTLDKTQTRFGQRLLRNWVGRPLLDKERLEERVSAVEELLDGSQTPKVDR----- 604
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSP--DIQRGITRIFHRTATPSEFIAVMQAILYA 542
L SL R+ D++R + RI++ T E + +Q
Sbjct: 605 ---------------------LRSLLRNTKIDLERSLIRIYYGKCTRPELLTALQT---- 639
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILT---ASSPAVIGKAAKLLSTVNKEAADQ 599
LQ++ E +T KT A K ++ AS P++ +L +N EAA +
Sbjct: 640 ---LQKIST-----EFMTVKTPSDAGFKSSLINTAIASLPSINETIIFILDKLNAEAARK 691
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM-RNLEFMSVSGITHLI 658
D + E+ + + + + +LD+ + ++ + ++++SV+GI +LI
Sbjct: 692 DDKYAFF-REEFETDEIGNHKMGIAAVEHDLDTHRAIAASKIKKPKPVDYVSVAGIEYLI 750
Query: 659 ELP-ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF 716
E+ + K VP +WAK++ TKK R+H+PEV+T L + E L+ C +A+ + L E
Sbjct: 751 EVSNTDLKNVPASWAKISGTKKLSRFHTPEVITMLRERDQHKESLSAACDSAFAALLAEI 810
Query: 717 GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL 776
+YA + + +LA LDCL +LAT + + +P F + QI + GRHP+++ +L
Sbjct: 811 STHYAPIRDTITSLALLDCLLSLATTAALPGYCKPTFTN---TTQIDVVDGRHPMVEQLL 867
Query: 777 LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
+++PN T+L +ITGPNMGGKS Y+RQVALI I+AQ+GS+VPA+SA L +LD
Sbjct: 868 PTSYIPNSTSLSTAETRALLITGPNMGGKSSYVRQVALIQILAQIGSYVPATSATLGLLD 927
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVI 876
GIYTRMGA DSI +STF+ EL+E + IL+ T++SL +
Sbjct: 928 GIYTRMGAFDSIFTAQSTFMVELSETASILKAATSRSLTL 967
>gi|260940443|ref|XP_002614521.1| hypothetical protein CLUG_05299 [Clavispora lusitaniae ATCC 42720]
gi|238851707|gb|EEQ41171.1| hypothetical protein CLUG_05299 [Clavispora lusitaniae ATCC 42720]
Length = 1002
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 336/1070 (31%), Positives = 521/1070 (48%), Gaps = 149/1070 (13%)
Query: 4 QKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKV--------VS 55
++Q+ IS FF P + T S P P P + KRK+ S
Sbjct: 6 KRQKSISSFFTPVKTKVTPS-----PNPGADADTPTKDNAI-----KRKLEHFTHSNNTS 55
Query: 56 SLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYK 115
+ P K P P P S T K TPLE+Q ++LK+++ D +L I+VGYK
Sbjct: 56 PIVPKKARAIPSKKPSENAKKPVSS---TAKSKLTPLEKQFIDLKSEHGDKILAIQVGYK 112
Query: 116 FRFFGEDAEMAAKVLGIYA-----HLDHN----FMTASIPTFRLNVHVRRLVNAGFKVGV 166
F+FFG DA A+K+L I LD F SIP RL+VH++RL+N G KVGV
Sbjct: 113 FKFFGNDAVTASKLLNIMLLPGNLELDERTHDRFAYCSIPDNRLHVHLQRLLNHGLKVGV 172
Query: 167 VKQTETAAIKA-HGPGKAGPFGRGLSALYTKATLEAAEDVGGG---------EDGCGGES 216
VKQTETAAIK+ K+G F R L+ +YTKAT E + G D GE+
Sbjct: 173 VKQTETAAIKSVESSNKSGLFERKLTGVYTKATYMGDELLTGDPTISRSNNVADSLDGET 232
Query: 217 NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLL 276
Y++CV + + F + +VAV+ TGD+V+ F+D R LE L+
Sbjct: 233 -YVLCVNESN--------------FSKQTSLVAVQPLTGDIVFDVFSDTPSRDELETRLM 277
Query: 277 SLSPAELLL---GQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENM 333
+P+E+++ + +S +T K+L + A+A + +
Sbjct: 278 YFNPSEVIVITEDEEISPETSKVLR-------------------LKNSAMAITQKIQRSE 318
Query: 334 GEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT-IRHLKQFGLERIMCLGA 392
E +E + P+ N +N P L +QA + I +L +F L I + +
Sbjct: 319 TEIKSDMHEFFSSVDPDGHNAYLTEHYTLNYP-LGIQACIIELIDYLSEFKLSNIFTIPS 377
Query: 393 SFRSLSGS-MEMTLSANTLQQLEVLRNNSN-GSEYGTLLHIMNHTLTIYGSRLLRRWVTH 450
+F SL+ + M M L A+TL+ L++ N + ++ GTLL ++++T T GSR LR+W+
Sbjct: 378 NFSSLTDAHMYMVLPASTLKALDIFEVNEDPTTKKGTLLWLLDNTFTRKGSRTLRKWINR 437
Query: 451 PLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS---VLT 507
PL R I R AV + F +IL + +
Sbjct: 438 PLVKREEIEQRAKAVDVLKSG-------------------------AFVHILDAFKQAVM 472
Query: 508 SLGRS-PDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK---- 562
+G+S D+ R + +I + S + + LY L+ H E SK
Sbjct: 473 KIGKSGVDLDRSLIKIHYSATYMSN--KITRKDLY--NMLRSFHEILELFRSFGSKGIEE 528
Query: 563 --TLHSA-LLKRLILTASSPAVIGKAAKLLSTVNKEAA--DQG---DLLNLMIISNGQFS 614
++H LL ++ S + +LL ++N A DQ + +S +F
Sbjct: 529 FKSVHDCPLLISILEDMLSLSENHTVDELLKSINPSGALSDQNLSEQKMKFFDLSQDKFH 588
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKV---PLNWA 671
++++ + + +LD + RK L L F++ THLIE+ V P +W
Sbjct: 589 KISKELDEIARVERKLDDELQNIRKVLKRPQLSFITNFKETHLIEVRNGKNVDALPSDWV 648
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
K++ TK R+ +PEV +L N+ L + C ++ FL E Y + V LA
Sbjct: 649 KISGTKTVSRFRTPEVTKLHKELQYHNDMLLMACDECFNFFLSEVDSEYIYLRRIVDNLA 708
Query: 732 ALDCLHALATLSRNK---NFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTN 786
DCL +LA + + F+RP VD+ + + + HP+L + +N +VPND
Sbjct: 709 TFDCLLSLARSAADVGDVTFIRPKLVDEQ---VMSVKNSVHPILLNLPQNNGQYVPNDIK 765
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L + IITGPNMGGKS Y++Q+AL+ IM Q+G +P SSA + + D I+ RMGASD
Sbjct: 766 LSTDDNRVLIITGPNMGGKSSYVKQIALLAIMTQIGCLLPCSSATMGIFDSIFIRMGASD 825
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE-HKK 905
+I +G+STFL E+ E++ I++N T +SLVI+DE+GRGT T DG+++AYA L Y++E KK
Sbjct: 826 NILRGKSTFLVEMLESANIIQNYTPKSLVILDEIGRGTGTSDGISLAYAILRYIIEDKKK 885
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
+ LF+TH+P ++ ++T+F V +H++++ + G +V +LYK+V GV
Sbjct: 886 PLTLFITHFPSLSTLETEF-NDVKNFHMAFVEKKRNEGK--ESEWPEVIFLYKLVSGVVS 942
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLS 1015
+S+G VA+LA + S I A VS ++ KR LL LS
Sbjct: 943 NSYGLNVAKLAGIDDSIIQSA--------YNVSESIKRLIEKRSLLQLLS 984
>gi|444729598|gb|ELW70009.1| DNA mismatch repair protein Msh3 [Tupaia chinensis]
Length = 901
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 262/766 (34%), Positives = 405/766 (52%), Gaps = 100/766 (13%)
Query: 246 GVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE---KMLLAYAG 302
G V+ +TG+VV+ F D RS LE + L P ELLL LS+QTE + + A +
Sbjct: 188 GYKGVQPATGEVVFDSFQDSASRSELETRISCLQPVELLLPSDLSEQTEMLVRRVTAVSV 247
Query: 303 PASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
+RVE + F A V Y +D +D+ +G+ + I+
Sbjct: 248 RDDRIRVERMNSLYFEYSHAFQAVTEFYA----------KDAKVDI--KGSQ--SFSSII 293
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSN 421
N+ + +LA I++LK F LE+++ +F+ LS ME MT++ TL+ LE+L+N ++
Sbjct: 294 NLEKPVMCSLAAIIKYLKGFNLEKVLSKPENFKQLSSEMEFMTVNGTTLRNLEILQNQTD 353
Query: 422 GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESV 481
G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 354 MKTKGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVVHSESS------- 406
Query: 482 GQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY 541
+ + L + PDI+RG+ I+H+ + EF +++ + +
Sbjct: 407 -------------------VFGQIENHLHKLPDIERGLCSIYHKKCSTQEFFLIVKTLCH 447
Query: 542 AGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
+ Q L + + S LL+ LIL P ++ L +N++AA GD
Sbjct: 448 LKSEFQALI-------PAVNSHIQSDLLRTLILEI--PELLSPVDHYLKILNEQAAKIGD 498
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
L F + + + +Q +++ + RK L + ++++VSG +IE+
Sbjct: 499 KTELFK-DLSDFPLIKKRKDEIQEVTDKIQIHLLEIRKILKNPSAQYVTVSGQEFMIEIK 557
Query: 662 --ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
A +P +W KV STK R+HSP ++ L E+L + CRA W FL+
Sbjct: 558 NSAVSCIPTDWIKVGSTKAVSRFHSPFIVENYRHLNQLREQLVLDCRAEWLDFLE----- 612
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--L 777
TL + + I +GRHPV+D +L
Sbjct: 613 --------------------PTLQEERKII--------------IKNGRHPVIDMLLGEQ 638
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D +VPN TNL + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DG
Sbjct: 639 DQYVPNSTNLSGDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDG 698
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TRMGA+D+I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL
Sbjct: 699 IFTRMGAADNIYKGRSTFMEELIDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATL 758
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV--MGPMDSKSDQD-VT 954
+Y + K + LFVTHYP + +++ ++ VG YH+ +L + + P + + D VT
Sbjct: 759 EYFIRDVKSLTLFVTHYPPVCELEKSYSQQVGNYHMGFLVNEEASKQDPGEEEEVPDFVT 818
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+LY++ G++ S+G VA+LA +P + +A + +LE V+++
Sbjct: 819 FLYQITRGIAARSYGLNVAKLADVPGEILKKAAYKSKELEGLVNTK 864
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 61/75 (81%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 116 YTPLELQYIEMKQQHRDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 175
Query: 149 RLNVHVRRLVNAGFK 163
RL VHVRRLV G+K
Sbjct: 176 RLFVHVRRLVAKGYK 190
>gi|349602838|gb|AEP98851.1| DNA mismatch repair protein Msh3-like protein, partial [Equus
caballus]
Length = 590
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/602 (38%), Positives = 344/602 (57%), Gaps = 53/602 (8%)
Query: 357 AIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEV 415
+ GI+N+ + +LA IR+LK F LE+++ +F+ SG ME MT++ TL+ LE+
Sbjct: 35 SFSGIINLEKAVICSLAAIIRYLKDFNLEKVLSKPKNFKQFSGEMEFMTINGTTLRNLEI 94
Query: 416 LRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSY 475
L+N ++ G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ Y
Sbjct: 95 LQNQTDMKTKGSLLWVLDHTKTAFGRRKLKKWVTQPLLKIRDINARLDAVSEVL-----Y 149
Query: 476 RTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV 535
S GQ + L + PDI+RG+ I+H+ + EF +
Sbjct: 150 SESSVFGQ---------------------IENHLRKLPDIERGLCSIYHKKCSTQEFFLI 188
Query: 536 MQAILYAGKQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVN 593
++ + H+ E++ V + H S LL+ IL P ++ + L +N
Sbjct: 189 VKTLH---------HLKSEFQALVPAVNSHAQSDLLRTFILEI--PELLSPVERYLKILN 237
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
++AA GD L F + + + +Q + + RK + ++++VSG
Sbjct: 238 EQAAKIGDKTELFK-DLSDFPLIKKRKDEIQEVTHRIQRHLQEIRKIIKNPFAQYVTVSG 296
Query: 654 ITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
LIE+ A +P +W K+ STK R+HSP V+ L E+L + C A W
Sbjct: 297 QEFLIEVKNSAVSCIPTDWVKIGSTKAVSRFHSPFVVENYRHLNQLREQLVLDCSAEWLE 356
Query: 712 FLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPV 771
FL+ F +Y AV LA +DC+ +LA +++ ++ RP E +I I +GRHPV
Sbjct: 357 FLENFSEHYHSLCKAVHHLATVDCIFSLAKVAKQGDYCRPTL---QEERKILIKNGRHPV 413
Query: 772 LDTIL--LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
+D +L D +VPN TNL + E IITGPNMGGKS YI+QVALI +MAQ+GS+VPA
Sbjct: 414 IDVLLGEQDQYVPNSTNLSGDSERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEE 473
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
A + ++DGI+TRMGA+D+I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG
Sbjct: 474 ATIGIVDGIFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDG 533
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKS 949
+AIAYATL++ + K + LFVTHYP + +++ ++ VG YH+ +L + DSK
Sbjct: 534 IAIAYATLEHFIRDVKSLTLFVTHYPPVCELERSYSQQVGNYHMGFLVNED-----DSKP 588
Query: 950 DQ 951
DQ
Sbjct: 589 DQ 590
>gi|242214474|ref|XP_002473059.1| predicted protein [Postia placenta Mad-698-R]
gi|220727797|gb|EED81705.1| predicted protein [Postia placenta Mad-698-R]
Length = 972
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 276/851 (32%), Positives = 431/851 (50%), Gaps = 123/851 (14%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
PS QT YTPLE Q+ ELKTKYPD +LM+EVGYK RFFGEDA++A++ LGI
Sbjct: 203 PSGQT-----YTPLELQIRELKTKYPDTILMVEVGYKVRFFGEDAKIASQALGI------ 251
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
+G+V+QTETAA+K G + F R L+ LYT AT
Sbjct: 252 ------------------------ALGIVEQTETAALKKAGDTRNELFSRQLTHLYTSAT 287
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+++ +D + L+C+V++ ++ G+ D V +G+V + STGDVV
Sbjct: 288 Y--VDEMNSTDDLDPSSAPALMCLVEE------LKGGMGADE-RVLVGMVVISASTGDVV 338
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYA-----GPASNVRVECA 312
+ EF +S ++ P ELLL + LSK +EKM+ + P +R+E
Sbjct: 339 WDEFEG---KSFCSTRMVHSKPYELLLPRDKLSKPSEKMIHHFTQYELHSPNHKIRIERT 395
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D A + + Y + + +++ E N + I + P L VQAL
Sbjct: 396 QED-LTYTEAFSYLTRFYSDQTKAAIAS---------ESYNSGKLMAAIADFPKLVVQAL 445
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
A +++L F +E + F + M L++NTL LE+ RN ++ G+L+ I+
Sbjct: 446 AYAVKYLSDFHVEDSLRETKFFAEFTERTHMLLNSNTLTNLEIYRNETDYMTKGSLMWIL 505
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+HT T +G+R+LR WV PL D ++ R+DAV EI +D T
Sbjct: 506 DHTTTKFGARMLRSWVGRPLTDLKVLQERIDAVEEIL-------------------ADKT 546
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH-- 550
+ L+ + L R PD+ +G+ RI + TP E ++ A Q ++
Sbjct: 547 MK-------LTQLRELLKRLPDLAKGLCRIQYGKCTPQELAILLPAFDKIATTFQPMNNP 599
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN 610
D ++ + + +++ P + +L+ VN + A +G + M
Sbjct: 600 RDASFKSPILNSIVYAL-----------PQLREAMKELMGAVNIKMAKEGKK-DAMWNDP 647
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL--PANFKVPL 668
++ + A+Q A+ EL ++ R+ L L + + + +++E+ AN ++P
Sbjct: 648 DRYPHLDNLMMAIQVAESELADELHNIRRVLKKPALTYTTWNTEEYVVEIRKDANREIPA 707
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG-GYYAEFQAAV 727
W ++ RYH PEV L + A E L A+DSFL+E +Y + AV
Sbjct: 708 TWQLLSR-----RYHPPEVRKKLQERAQYMEALEASANKAYDSFLREISQKHYGLLRDAV 762
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNL 787
LA DCL +LA ++ + +V+P F ++ + I GRHP+++ + D FVPN ++
Sbjct: 763 NKLAVADCLLSLARVALQEGYVKPQFTNED---TLEIVDGRHPMVEALRSDPFVPNSIHM 819
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+IITGPNMGGKS +R AL IMAQ+GS++PA + ++ +LDG+ TRMGASD
Sbjct: 820 GNGYPRSKIITGPNMGGKSSVVRMTALCAIMAQIGSYIPARTMKIGLLDGVLTRMGASDE 879
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ +GRSTF+ E+ E S IL+ T ++LVI+DELGRGTST DG YL++ KK
Sbjct: 880 LARGRSTFMVEMQETSDILQAATPRTLVILDELGRGTSTFDG---------YLVQTKKSK 930
Query: 908 VLFVTHYPKIA 918
LF+THYP++A
Sbjct: 931 TLFITHYPQVA 941
>gi|363754089|ref|XP_003647260.1| hypothetical protein Ecym_6039 [Eremothecium cymbalariae DBVPG#7215]
gi|356890897|gb|AET40443.1| hypothetical protein Ecym_6039 [Eremothecium cymbalariae DBVPG#7215]
Length = 1038
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 288/947 (30%), Positives = 490/947 (51%), Gaps = 134/947 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---AHLDHN----- 139
K T L+QQ +LK + D +L++ VGYK++FF EDA + +++L I L N
Sbjct: 154 KLTELDQQFKDLKLRNMDKVLVVRVGYKYKFFAEDAVLVSQLLQIKLVPGKLTVNETNPN 213
Query: 140 ------FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
F +IP RL VH++RL++ KVG+V+QTET+A+K + F R ++++
Sbjct: 214 DIKFKQFAYCTIPDVRLEVHLQRLIHHNLKVGLVEQTETSAVKKNSGKSNSVFSREVTSV 273
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
+T+AT E G E G+S + +V D V I+ + +++V ++
Sbjct: 274 FTRATYGINEIFGSKERHVIGDSTSIWGLVCD---VQTIQTNYY---------LISVNLN 321
Query: 254 TGDVVYGEFND-GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
+G+V Y EF D ++ LE + L+P+E++ +PL+ K+ ++ +VR
Sbjct: 322 SGEVFYDEFKDEKYVNESLETRITYLNPSEVVTQEPLNPIITKV---FSNINPDVRF--- 375
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
+ EDT +++ V + + + I A
Sbjct: 376 --------------------IVEDTTDADKETLGKVEFEFDTKGKI----------YVAA 405
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
L ++L F + ++ ++++ S +MTLS+N + L++ NN++ G+LL ++
Sbjct: 406 TLVHKYLSTFNNQELLQFKGNYKTFSSKTQMTLSSNAFESLDIFINNTSKDSKGSLLWLL 465
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+HT T +G RLL+ W++ PL D I+ RLDAV I+ + D
Sbjct: 466 DHTRTPFGFRLLKNWISKPLIDVAEINKRLDAVECISSEI-----------------DKI 508
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRI-FHRTATPSEFIAVMQAILYAG-----KQL 546
+E L++VL D++R + R+ + RT+ ++ + Q +A +
Sbjct: 509 FIES-----LNNVLRD---CQDLERILNRVAYGRTSKREVYLFLRQLAQFASLFKSHHRY 560
Query: 547 QQLHIDGEY-REKVTSKTLHS--ALLKRLILTASSPAVIGKAAKLLSTVNKEAA-----D 598
+ HI E R V SK L S A L ++T P KLLS +N EAA +
Sbjct: 561 IEDHILSENGRIFVGSKLLSSIFAELHNYLMTFPIP-------KLLSMINVEAALDKKQE 613
Query: 599 QG--DLLNLMIISNGQ--FSEVARARKAVQSAKEELDSL-INMCRKQLGMRN-LEFMSVS 652
+G + NL N + S++ V+ EEL ++ + + R + +N +F+
Sbjct: 614 RGASEYFNLNNYDNAEALLSKLRDIDAVVEELHEELKNIRVVLKRPMMNYQNETDFLIEV 673
Query: 653 GITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
T + +P++ W KVNSTK R+ +P +L E L + A + +F
Sbjct: 674 RNTQIKSVPSD------WVKVNSTKMVSRFRTPVTTKLSAKLQYHKELLENIAEAEYAAF 727
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVL 772
LK Y ++A+ LA DC+ +LA S N ++VRP F + + +++ R+P++
Sbjct: 728 LKRITNEYVGLKSAINKLATYDCILSLAATSVNVDYVRPKFSNQSQYIKVK--KARNPII 785
Query: 773 DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
+++ + N++PND ++ + +ITGPNMGGKS Y+RQVAL+ I+AQ+G FVPA AE
Sbjct: 786 ESLNV-NYIPNDVSMSQDGHKIMVITGPNMGGKSSYVRQVALLVIIAQIGCFVPAEYAEF 844
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
+ D I+TR+GA D++ +G STF E+ E +IL++ T +SL+++DE+GRGT THDG++I
Sbjct: 845 SIFDRIFTRIGAHDNLLRGDSTFKVEMTEVLHILKSSTPRSLLLLDEVGRGTGTHDGISI 904
Query: 893 AYATLDYLLE-HKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
+YA L Y +E + C +VLF+THY + +IK++ + YH+S++ H+ S
Sbjct: 905 SYAILTYFIELRENCPLVLFITHYTALGNIKSEI---LSNYHMSFIEEHRPGENWPS--- 958
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEV 997
VT+LYK+ G + +S+G VA+LA +P S I+RA I+ K++ E+
Sbjct: 959 --VTFLYKLQKGQAHNSYGLNVAKLANVPTSIINRAYQISEKMKKEI 1003
>gi|47226649|emb|CAG07808.1| unnamed protein product [Tetraodon nigroviridis]
Length = 633
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 250/664 (37%), Positives = 375/664 (56%), Gaps = 58/664 (8%)
Query: 350 EQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLS-GSMEMTLSAN 408
EQG ++ + ++ + L I++L++F LER++ +SF+ LS S MTL+A
Sbjct: 13 EQGCR--SLSSVASLESPVICCLGPLIQYLREFNLERVLRSESSFQHLSSASGGMTLNAA 70
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL+ LE+L N ++G G+LL +++HT T +G R+LR+WV+ PL D + RLDAV EI
Sbjct: 71 TLRNLEILNNQTDGRVKGSLLWVLDHTRTRFGRRMLRKWVSQPLTDTESVLRRLDAVQEI 130
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
ES S P L+SV + L PD+ RGI I+HR ++
Sbjct: 131 LESNCS---------------------P-----LNSVRSLLSHLPDLDRGICGIYHRKSS 164
Query: 529 PSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL 588
EF + ++ +LQ L + ++LL+ L+L +P ++ A
Sbjct: 165 TQEFYIICSSLARLSLELQALL-------PAIRSQVQASLLQGLLL--DTPDLLAPAQSF 215
Query: 589 LSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEF 648
L +N++AA G+ L + F + RK +Q +E+ R L ++
Sbjct: 216 LKVLNEKAAKSGNKTELFSDLSA-FPVLQERRKQIQEVIDEIHYHRKEIRLILKAPAFDY 274
Query: 649 MSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCR 706
+VSG LIE+ + VP W KV+STK RYH+P ++ +L E+L + C+
Sbjct: 275 TTVSGQEFLIEVKNSLSSTVPPEWVKVSSTKAVSRYHTPLLVERYKKLLQLREQLLLDCQ 334
Query: 707 AAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICS 766
W FL +FG +Y + A+ LA LDCL +LA +++ ++ RP ++ QI I
Sbjct: 335 TEWIHFLDQFGEHYHLMKRAISHLATLDCLFSLAEVAKQGDYCRPEVSENCR--QIVIRD 392
Query: 767 GRHPVLDTILLDN--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
GRHP +D ++ +N +VPN T L E + IITGPNMGGKS YIRQVALI +MAQ+GS+
Sbjct: 393 GRHPAIDLLMGENNQYVPNVTELQGEGKRTMIITGPNMGGKSSYIRQVALICVMAQMGSY 452
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA A+L +LDGIY RMGASD+I Q RSTF+E++ EAS I+ T +SLVI+DELGRGT
Sbjct: 453 VPALQAQLGMLDGIYVRMGASDNIFQRRSTFMEDVREASEIVSRATERSLVILDELGRGT 512
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
STHDG+AIAYATL+Y + K + LFVTHYP + +++ + V YH+++L +
Sbjct: 513 STHDGIAIAYATLEYFIRDVKALTLFVTHYPPLCELERVYPEHVSNYHMAFL-----LNE 567
Query: 945 MDSKSDQD--------VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
D +D D +T+LY++ G + S+G VA+LA +P + A A +LE+
Sbjct: 568 PDVAADTDGAEVAPEFITFLYQLTQGAAGRSYGLNVARLADIPDPILHTAARKAQELEST 627
Query: 997 VSSR 1000
V++R
Sbjct: 628 VNAR 631
>gi|403160228|ref|XP_003320781.2| hypothetical protein PGTG_02803 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169467|gb|EFP76362.2| hypothetical protein PGTG_02803 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1162
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 279/943 (29%), Positives = 477/943 (50%), Gaps = 67/943 (7%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K T LEQQ E K +YP++++ +EVGYK R FGEDA +A++VL I TA P
Sbjct: 204 KLTQLEQQWAEFKKQYPNLVIFMEVGYKIRLFGEDAVLASQVLSIGHLAIPGRETAYFPK 263
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP----FGRGLSALYTKATLEAAE 203
L +H+ R+V AG K+G+ Q+ET +++ G+ G FGR L+ +Y+ +T ++
Sbjct: 264 TSLYIHMSRMVMAGHKIGLFVQSETRSLRNTELGEKGKKARVFGRHLAGVYSLSTWTESD 323
Query: 204 D---VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+G + G N++V + R+ + V+L + A+ G++V+
Sbjct: 324 PNQALGITDSETGLAQNWIVSF---HASSPATRHPQREE--KVQLSMAAICPQNGEIVWD 378
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSK---QTEKMLL-----AYAGPASNVRVECA 312
+ D +RS LE + L P E+L+ PLS +EK++ A + R+E
Sbjct: 379 SWLDDPIRSMLETRMTYLRPVEILV--PLSGLDGPSEKLINWLIKDPLARSSVKPRLEST 436
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVP-EQGNHRSA--IEGIMNMPDLAV 369
D + A V + + + ++ Q+ P +G+ + I+ +PD +
Sbjct: 437 DHD-YTPQSAYKLVSNFCQPPKRKSKASMASQDKGNPVSEGDSTEPEFLHHIVELPDGVL 495
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
ALA I H+K + LE I F+S M L ANTL+ LE+ N+++ +E G+L
Sbjct: 496 IALAGLIVHMKSYQLESIFRQPGQFKSFINQSYMILDANTLKNLEIFENSTDRTERGSLF 555
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ T T G R+L++W+ PL D+ ++ R DA+ EI S
Sbjct: 556 WVLDRTKTAMGKRILKQWIGKPLVDQRILKERADAIEEIIVS------------------ 597
Query: 490 DVTIVEPQFYYILSSVLTSLG-RSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
Q + IL + LG R PD+++ + RI + T E + ++ ++
Sbjct: 598 -------QNHPILIKMRRMLGMRLPDLEKSLVRIQYGKCTEKELLKFLEVMVELTATFGS 650
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
G + + +S+LL+ + S AV + + S +N +A +G+ ++
Sbjct: 651 PSSAGSGK-----RMFNSSLLQGIFEVFS--AVREQTIEYRSELNAKAILKGEYEDMFTN 703
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KV 666
++ + ++ + + + E + CR L LE++++ LIE+ +V
Sbjct: 704 ADELYPDLTDLKDCLSCIQAESAEHLQACRITLQNPKLEYVTIGSDEMLIEVRHQQLDRV 763
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P NW K +ST+ R+ + E L + + R ++ FL+ Y F+ A
Sbjct: 764 PENWTKFSSTRAVQRFRTAEGQRLLAERDKYRALIVRRSRGYFEGFLESMEEAYDGFRDA 823
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
V L +DCL +LAT++ + RP V+ H ++I +GRHP+++ I+ + VPN +
Sbjct: 824 VNRLGLIDCLLSLATVAVENRYARPRIVE-HPAIEIR--NGRHPIVEQIIDNPLVPNTCS 880
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
I+TG NMGGKS + + I ++AQ+GS+VPA A++ + DG YTRMG S+
Sbjct: 881 FTQNGLSTMILTGNNMGGKSVTAKMIGCIVLLAQIGSYVPAERAKIGLFDGCYTRMGMSE 940
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
+ QGRS F+ E+NEA+ I+R + +SLVI+DELG GTST+DG+AIA A L+ L+ +C
Sbjct: 941 ELAQGRSAFMVEMNEAAKIMRTASPRSLVIIDELGYGTSTYDGLAIANAVLNQLVSSIRC 1000
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD---VTYLYKVVPGV 963
+F+THYP++ ++ K+ +YH+ +L S + + + + D +T+LYK+ PG+
Sbjct: 1001 FTIFITHYPQLNELAIKYPERAKSYHMKFLESQGSLKAEEGEGEDDAGWITFLYKLTPGL 1060
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSA 1006
+ S G VA+LA LP S + +A + + LE V + +A
Sbjct: 1061 ATKSHGIHVARLAGLPTSILHQARLKSRLLEESVGRKKHTHTA 1103
>gi|344302555|gb|EGW32829.1| hypothetical protein SPAPADRAFT_70807 [Spathaspora passalidarum NRRL
Y-27907]
Length = 968
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 295/1039 (28%), Positives = 503/1039 (48%), Gaps = 137/1039 (13%)
Query: 5 KQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSF--------SPAKRKVVSS 56
KQ IS FF +A+ S P+ P + SF SPA +
Sbjct: 5 KQATISSFFK------SATPIKSEENSPKSFPTANVLDQFSFKNGNHKRSSPALQTPTPP 58
Query: 57 LFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKK------YTPLEQQVVELKTKYPDVLLMI 110
P + SP IP Q T + + YTPLE+Q+++L + D +L+I
Sbjct: 59 TPTPPSTSDNTESP----AIPQKRKQQTQSARKPKEPSYTPLEKQIIDLTDAHHDKILLI 114
Query: 111 EVGYKFRFFGEDAEMAAKVLGI-YAHLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVK 168
+VGYK++ +G AE+ + +L I Y D+ F S P +L+++++R++N G+K+GVVK
Sbjct: 115 QVGYKYKVYGPHAEIVSHILNIMYIPKDNPRFAYCSFPDIKLHINIKRIINHGYKIGVVK 174
Query: 169 QTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN 228
Q E+A ++ + R ++ +YTK T E VG G D + Y+VC+ + + +
Sbjct: 175 QQESAIVRTIEKKGSDLMKREVTGVYTKGTYLGDEFVGNGNDNDNEKPQYIVCICEVNEH 234
Query: 229 VGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP 288
+VAV++ TG+++Y F D R +E L LSPAE+++
Sbjct: 235 ---------------DFAIVAVQLLTGNIIYDMFKDRLNREEMETRLTYLSPAEVIV--- 276
Query: 289 LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
N + E +S I E++ +++ T S ED +D
Sbjct: 277 ----------------VNSQDEISSSTLKILKLINPELVPMHK-----TTSKLEDLELDA 315
Query: 349 PEQGNHRSAIEG-IMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLS 406
IE +N P +A ++L +F L + L + + S M L
Sbjct: 316 -------DLIEYYTINFPHSVQSCIATLTKYLSEFKLNSVFTLRENITPFTNSTNYMILP 368
Query: 407 ANTLQQLEVLRNNSN-GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
A+TL L+V N+++ SE GTL+ ++NHT T G R+ +WV+ PL R I RL AV
Sbjct: 369 ASTLNALDVFTNSTDPESERGTLVWLLNHTRTRMGQRMFTKWVSRPLVHRPAIEDRLQAV 428
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSP--DIQRGITRIF 523
++ + + +++ S+ L + D++ + +
Sbjct: 429 EDLRKG--------------------------YIHVVDSLRNQLDKFKRLDLEELLIKAH 462
Query: 524 HRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT--SKTLHSALLKRLILTASSPAV 581
+ + + ++ +A L + G++ + + +K++ S LL + +
Sbjct: 463 YSVSYKTGKLSRKEAFLMIHGFNDVFKVVGQFEKSICELNKSVKSRLLLDIFEGLLDFSK 522
Query: 582 IGKAAKLLSTVN-----KEAAD----QGDLLNLMIISNGQFSEVARARKAVQSAKEELDS 632
A + + +N E+ D + NL +N + +A+ ++ + + LD
Sbjct: 523 TNVAREFVDMINPSYLLSESKDIDEQKTKFFNL---NNFKSEPIAKEQQEITDIERLLDE 579
Query: 633 LINMCRKQLGMRNLEFMSVSGITHLIELPANFKV---PLNWAKVNSTKKTIRYHSPEVLT 689
+ R L NL++++V+ +LIE+ V P + +++ K R+ + E+
Sbjct: 580 ELENVRHLLKRANLKYITVNREPYLIEVRNGKDVDGLPDTFQRISGNKAVSRFRTREISR 639
Query: 690 ALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFV 749
+ L E L C A+ +FL++ + F+ ++ LA DCL +L S N V
Sbjct: 640 LYNLLQYHQEILLQRCDEAYMAFLQQIDDKHPFFRNTIKHLATFDCLLSLTAASLIPNHV 699
Query: 750 RPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
RP F DD + + + GRHP+++ L DN+VPND ++ +++ IITGPNMGGKS Y+
Sbjct: 700 RPKFTDD---LLVEVRQGRHPIIEQ-LRDNYVPNDISMTYDKDRALIITGPNMGGKSSYV 755
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
+Q+AL+ IMAQ+G+++P SA + + D ++ RMGA D I +G+STF+ E+NE I+
Sbjct: 756 KQIALLVIMAQIGAYIPCQSATMGIFDTVFMRMGARDDILRGQSTFMTEMNECGSIISGL 815
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE-HKKCMVLFVTHYPKIADIKTKFTGSV 928
T +SLVI+DE+GRGT T DG+AIAY+ L YL+E +++ +V F+THYP + ++ +F G V
Sbjct: 816 TNRSLVIMDEIGRGTGTTDGIAIAYSVLKYLVECNQRPLVCFITHYPSLHVLEEEFPGQV 875
Query: 929 GTYHVSYLTSHKVMGPMDSKSD---QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISR 985
YH MG + D +V +LY +V GV +S+G VA+LA +P I
Sbjct: 876 VNYH---------MGFKEVAKDGEFPEVVFLYNLVRGVIGNSYGLNVAKLAGVPHEIIQG 926
Query: 986 ATVIAAKLEAEVSSRVQNR 1004
A ++ L ++ +R Q+R
Sbjct: 927 AYKVSEILRNKIEARDQHR 945
>gi|223590096|sp|A5DEV6.2|MSH3_PICGU RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|190345766|gb|EDK37709.2| hypothetical protein PGUG_01807 [Meyerozyma guilliermondii ATCC
6260]
Length = 960
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 305/970 (31%), Positives = 491/970 (50%), Gaps = 137/970 (14%)
Query: 59 PPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRF 118
PP K SP T+ I ++ T KK TPL+QQ ++LK +YPD +L I+VGYK++F
Sbjct: 65 PPSIASSIKKSPKTV--IGKHANSTKKPKKRTPLDQQFIDLKNEYPDCVLAIQVGYKYKF 122
Query: 119 FGEDAEMAAKVLGIY--------AHLDHN-FMTASIPTFRLNVHVRRLVNAGFKVGVVKQ 169
FG DA +++L I H+ F S+P RL++H++RL+ G KV VV Q
Sbjct: 123 FGVDAVPVSRILNIMFIPGNLTERDATHDKFAYCSVPDNRLHIHLQRLLTNGLKVAVVSQ 182
Query: 170 TETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNV 229
TE+A ++ K G F R ++A+YTKAT E+G G +++ C+
Sbjct: 183 TESAVLREAESSK-GLFLREVTAIYTKATY--------IEEGSG---DFISCIT------ 224
Query: 230 GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR--SGLEAVLLSLSPAELLL-G 286
NG G V V+ TG+++ +F++ S L+ L L P+E+++
Sbjct: 225 ---WNGTSA-------GAVTVQPCTGEIIVEDFSEKEPEALSELQTYLHHLRPSEIIVTD 274
Query: 287 QPLSKQTEKM--LLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQ 344
+K+ +K+ LL G A I EV S E + +++N
Sbjct: 275 NEATKENDKLSRLLKSFGGAR------------ISYKPFDEV-SPIEELLPASIANY--- 318
Query: 345 NMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT 404
+ N Q ++ I +LK F L++I + ++ S M M
Sbjct: 319 ---------------YVTNHSTTTTQCISQLITYLKDFSLDQIFTVPSNVSKFSTKMYMN 363
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L NTL+ LE+ +N+S G+E GTL ++HT T G R+L++WV+ PL D I RLDA
Sbjct: 364 LPGNTLKALEIFQNSS-GTEKGTLFWHLDHTHTKMGRRMLQKWVSKPLIDNASIQERLDA 422
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRS-PDIQRGITRIF 523
+ ES+ +Y N V + E ++ +GR D ++ + +I
Sbjct: 423 I----ESLMNY------------NYAVEVFE--------GIIKKIGRDESDWEKSMIKI- 457
Query: 524 HRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK-----TLHSALLKRLILTASS 578
H TA S+ + ++ Q + + ID Y+ K + K L ++ L AS+
Sbjct: 458 HYTANGSQNRVTRKEVVQLLLQFRSV-IDTVYKFKSSFKDSSISKLLQSMFSELAELAST 516
Query: 579 PAV--IGKAAKLLSTVNKEAADQG-DLLNL-MIISNGQFSEVARARKAVQSAKEELDSLI 634
P V + K+ + +E DQ + +L G SE+ + Q+ ++EL +
Sbjct: 517 PIVNDLLSRVKIEAVYREEVEDQKKEFFDLDSHPHEGIKSELNAISELEQALQDELVEI- 575
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
K++ + +++M+VS +LI L + P +W K+++TK RY P+V +L
Sbjct: 576 ----KKIIKKPVDYMTVSREPYLIALRGD-SGPQDWLKISATKTVTRYRPPKVSKLYKEL 630
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL-ATLSRNKNFVRPVF 753
E+L C A+ +FLK+ +Y F ++ +A +DCL +L AT S N + +P+
Sbjct: 631 LYHQEKLIQQCDEAFATFLKDIDSHYTYFSRLIKIVAEIDCLLSLKATSSSNSGYSKPIL 690
Query: 754 VDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQV 812
D I R+PV++ + +V ND + + IITGPNMGGKS Y++QV
Sbjct: 691 SDKQ---MIKAKRSRNPVIENLTSTSQYVANDIEISYDENRVLIITGPNMGGKSSYVKQV 747
Query: 813 ALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQ 872
ALI +M Q+G ++P SA + + D I RMGA D+I +G STF+ E++E S I+++ T +
Sbjct: 748 ALIALMTQIGCYLPCESAIVGIFDTILVRMGAEDNILKGESTFMVEMSECSTIIKSLTNK 807
Query: 873 SLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTY 931
SLVI+DE+GRGT T DG+AIAY+ + YL+E + + LF+THYP + ++ +V Y
Sbjct: 808 SLVILDEIGRGTGTEDGIAIAYSIISYLIEEPRLPLTLFITHYPSLKVLEDTHPKNVANY 867
Query: 932 HVSYLTSHKVMGPMD-SKSDQ---DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
H MG M+ +K+DQ DVT+LY + GV +S+G VA+LA +P I++A
Sbjct: 868 H---------MGFMEVAKADQEWPDVTFLYTLKRGVVSNSYGLNVARLAGIPSEIITKAF 918
Query: 988 VIAAKLEAEV 997
+A L+ ++
Sbjct: 919 KVAEALKQDI 928
>gi|255711001|ref|XP_002551784.1| KLTH0A07480p [Lachancea thermotolerans]
gi|238933161|emb|CAR21342.1| KLTH0A07480p [Lachancea thermotolerans CBS 6340]
Length = 1035
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 294/952 (30%), Positives = 477/952 (50%), Gaps = 120/952 (12%)
Query: 76 IPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-- 133
I S ++ + K TPL+QQV +LK ++ D +L + VGYK++FF DA + +K+L I
Sbjct: 139 IEPASKKSRKSDKLTPLDQQVKDLKLQHMDKILAVRVGYKYKFFAMDAVIVSKILQIMLI 198
Query: 134 --------AH-LDHNFMT---ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK-AHGP 180
+H D ++ SIP RL VH++RL+ KVGVV+Q ET AIK AHG
Sbjct: 199 SGKLTLDDSHPCDRSYKQLAYCSIPDNRLQVHLQRLLRHNLKVGVVEQAETQAIKRAHGT 258
Query: 181 GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDG 240
+G F R + ++TKAT E E GE + + + D
Sbjct: 259 S-SGVFRRKVDKVFTKATFSINETFNRAEANSTGELSTIWAL------------KAAEDE 305
Query: 241 FDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY 300
+++V++S+G+V++ +F+D S +E L K+ ++Y
Sbjct: 306 HFFHFWLLSVQLSSGEVIHDKFSDRKKMSAIE----------------LDKR-----ISY 344
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE--QGNHRSAI 358
P +E SR G L EV+ + + + D + PE QG+H I
Sbjct: 345 LSP-----IEVVSR------GPLPEVIVSFIKKRQSEV-QFYDLSTSEPEAPQGSHLGGI 392
Query: 359 EGIMNMPDLAVQALALTIRH-LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR 417
+ +P+ ++ L T+RH L+ + +I+ + +++ M LS NTL+ LE+
Sbjct: 393 K----LPEELLE-LRATLRHYLENYDTHKILDILHNYKPFDTKTNMILSPNTLESLEIFE 447
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N ++ + G+L+ I++HT T YG RLLR W++ PL D+N I+ RLDA+ + + S
Sbjct: 448 NQTDLTTRGSLMWILDHTRTPYGYRLLREWISRPLTDKNEINKRLDAIECARKEITSI-- 505
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
F LS++L +PD + + RI + + E ++
Sbjct: 506 --------------------FMEALSNMLKD---TPDFLKNLNRISYGQTSRQEVYVFLK 542
Query: 538 AILYAGKQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKE 595
+ K H + + T +H S LL ++ LL+ +N E
Sbjct: 543 HLDKIAKHFISHHYYLQEQVFDTGGRVHQRSTLLTSVLQQLDDALRKINVTHLLNMINVE 602
Query: 596 AA----DQGDLLNLMIISNGQFSEVARAR-KAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
A + ++N +EV ++ + + S KEEL + R+ L F
Sbjct: 603 GALDKNKEKSCNEFFDLNNYDNAEVIISKLRDIDSVKEELQRELERIRRVLRRPRFFFKD 662
Query: 651 VSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
I +LIE+ +P +W KV STK R+ +PE ++QL LT VC
Sbjct: 663 --EIEYLIEVRNTQLNGLPTDWVKVASTKTLSRFRTPETTKLVNQLEYHKNLLTYVCDEE 720
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGR 768
+ FL YA+ + + LA DC+ +++ S N+N+VRP F ++ QI+I +GR
Sbjct: 721 FKKFLVRISADYAQLRDIINKLATFDCILSISAASFNRNYVRPKFSENSR--QINIKNGR 778
Query: 769 HPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
+P+++++ + N+V ND ++ + IITGPNMGGKS +IRQVALIGI+AQ+GSFVPA
Sbjct: 779 NPIIESLDV-NYVANDVHMKEDANKLMIITGPNMGGKSSFIRQVALIGILAQIGSFVPAD 837
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SAE+ + + ++TR+GA D++ +G STF E+ E IL+NC SL+++DE+GRGT T D
Sbjct: 838 SAEIPIFNNVFTRIGAHDNLIKGDSTFKVEMLEMLDILKNCNENSLLLLDEVGRGTGTTD 897
Query: 889 GVAIAYATLDYL--LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMD 946
GV+I+YA + + +E K +LF+THYP + I + + YH+S++ +
Sbjct: 898 GVSISYAIIKHFTSMETKCPFILFITHYPILGSITSPL---LDNYHMSFIEERRPGERWP 954
Query: 947 SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIA--AKLEAE 996
+ +LYK+ G++ S+G VA+LA +P I++A I+ AK E E
Sbjct: 955 T-----AVFLYKLTRGLASDSYGLNVARLANIPTDIINKAFEISEQAKFEME 1001
>gi|429862191|gb|ELA36849.1| DNA mismatch repair protein msh3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 906
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 263/768 (34%), Positives = 398/768 (51%), Gaps = 84/768 (10%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------------ 133
NKK TP+E Q +E+K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 193 NKKLTPMEIQFLEIKRKHLDTVLIVEVGYKFRFFGEDARIAAKELSIVCIPGKYRYDEHP 252
Query: 134 --AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS 191
AH D F +ASIP RL+VH +RLV AG KVGVV+Q ETAA+K G + PF R L+
Sbjct: 253 SEAHWD-RFASASIPVHRLHVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNAPFVRKLT 311
Query: 192 ALYTKATLEAAEDVGGGEDGCGG--ESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGV 247
+YTK T ++ G E G GG YL+C+ + G G D V +G+
Sbjct: 312 NVYTKGTY--IDENGELETGDGGAPSGGYLLCITETPSK---------GQGTDEKVDVGI 360
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
VAV+ +TGD++Y F DGF+RS +E LL +SP E ++ L+K ++K++ +G ++NV
Sbjct: 361 VAVQPTTGDIIYDTFEDGFMRSEIETRLLHISPCEFVIVGDLTKGSDKLIRHLSGSSTNV 420
Query: 308 -----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
RVE R + A + V Y + T P+ + ++ I+
Sbjct: 421 FGDRSRVERVPRSKTMAAEAYSHVTQFYAEKLQQT-----------PDAAAS-ALLDRIL 468
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
++P+ L+ I HLK++GLE + L +F S S M L+ TL+ LEV RN ++
Sbjct: 469 HLPEPVTICLSAMISHLKEYGLEHVFDLTKNFASFSARQHMLLNGTTLESLEVYRNATDH 528
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
SE G+L ++ T T +G RLLR+WV PL D + + AR+ AV E+ + S +
Sbjct: 529 SERGSLFWALDKTTTRFGQRLLRKWVGRPLLDVSRLEARVAAVQELLDEQSSTKVD---- 584
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
+ +LSS+ T D++R + RI++ T E ++V+Q +
Sbjct: 585 --------------RLESLLSSIKT------DLERSLIRIYYGKCTRPELLSVLQTLQRI 624
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
Q + E TS + SA+ S P ++ L +N EAA + D
Sbjct: 625 AMQYSTVKSAEE--TGFTSPLISSAIF-------SLPQILDLVVSHLEKINPEAARKDDK 675
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIE-L 660
N S Q ++ + + S ++ LD + + +E+++VSGI LIE L
Sbjct: 676 YNFFRESE-QTEDIEDHKMGIVSVEQSLDEHRAEAASSIKRKKPVEYVTVSGIEFLIEVL 734
Query: 661 PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
+ K VP +W K++ TKK R+H+P V+ + + E L C AA+ S L+E
Sbjct: 735 NTDLKSVPASWIKISGTKKLSRFHTPTVVRLIQERDQHREALAAACDAAFTSLLREIADA 794
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
Y + AV +LA LDCL +L+ ++ + +P F+ I + GRHP+ + L D
Sbjct: 795 YQPLRDAVSSLATLDCLLSLSRVAALPGYTKPSFLSTPTQPTISVTQGRHPIAEHTLSDP 854
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPA 827
++P T L + +ITGPNMGGKS ++R VAL+ ++AQ+GS VPA
Sbjct: 855 YIPFTTKLSSPSPLAHLITGPNMGGKSSFVRAVALLVLLAQIGSVVPA 902
>gi|50306133|ref|XP_453028.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660536|sp|Q6CSR1.1|MSH3_KLULA RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|49642161|emb|CAH01879.1| KLLA0C18590p [Kluyveromyces lactis]
Length = 1029
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 276/945 (29%), Positives = 477/945 (50%), Gaps = 117/945 (12%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHN 139
+NKK T L+QQ ELK K+ D +L + VGYK++FF +DAE+ + +L I LD +
Sbjct: 145 NNKKLTELDQQFKELKLKHMDTILCVRVGYKYKFFAKDAEIVSNILQIKLVPGKKTLDES 204
Query: 140 ---------FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGL 190
F SIP RL+VH++RLV +KV VV+QTET+A+K + F R +
Sbjct: 205 DPNDRNYRKFQYCSIPDTRLHVHLQRLVFFNYKVAVVEQTETSALKKNN-NSGSLFTREI 263
Query: 191 SALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
++TK + E ED G+ + + ++ K+R ++ +++V
Sbjct: 264 KNIFTKVSYGINETFDKSEDRILGDLTSVWAISINE--TSKMR----------KVNLISV 311
Query: 251 EISTGDVVYGEFNDGFLRS-GLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRV 309
++++G++V+ +F+D L + LEA + L+P E++ + L P S
Sbjct: 312 QLNSGEIVHDQFSDDILLNVNLEARIRYLNPTEIITEEEL-------------PPS---- 354
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
R F L + + Y++ E N A++G +++ +
Sbjct: 355 ---IRTIF---TKLNQDIQFYQSHKEAC--------------PNLFDALQG-LDLNNELK 393
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
+ L++ +L F +++ +++ S + M L NT++ LE+ N++ G+LL
Sbjct: 394 RLLSVLHSYLSTFENTKVLYFASNYSSFTAKNFMVLPRNTIESLEIFENSTTNKTNGSLL 453
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+M+HT T +G RLLR+W++ PL D I R DA++ I + + S
Sbjct: 454 WVMDHTRTQFGYRLLRKWISKPLIDLKSILDRQDAITCIMKEVHSI-------------- 499
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
S L +S D++R + RI + + + E ++ I +
Sbjct: 500 -----------FFESFNELLRKSIDLERALNRIAYGSTSRKEVYFFLKQIATFASLFKSH 548
Query: 550 H--IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LL 603
H I + ++ ++ S LL ++ + L +N +AA D ++
Sbjct: 549 HTFIHDQLHKENSALRKTSCLLFNILQNLDAFFSATDLPLFLQMINVDAALDKDSHKNVI 608
Query: 604 NLMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA 662
++ F E + + ++ K ELD + ++ L L + +LIE+
Sbjct: 609 EFFNLNKYDFPEGLLHKYRDIEEVKTELDDELQNIKRVLKRPTLSYKDTKD--YLIEVRN 666
Query: 663 N--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
VP NW KVNSTK R+ +P+ + +L N+ L ++ + FL+ Y
Sbjct: 667 TQAKTVPSNWVKVNSTKAVSRFRTPKTEELVGKLLYHNDLLNLLAEDEFKRFLQRIVDRY 726
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
AE + + LA DC+ +LA S N N+V+P + H+ V++ +GR+P+++++ + N+
Sbjct: 727 AEIKTCINNLATYDCILSLAATSSNVNYVKPKLTELHQKVKVK--NGRNPIIESLDV-NY 783
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPND + + IITGPNMGGKS YIRQVAL+ IM Q+G ++PA SAE+ + D I+T
Sbjct: 784 VPNDVLMSSNSGKINIITGPNMGGKSSYIRQVALLVIMTQIGCYIPADSAEMSICDRIFT 843
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+G+ D + +STF E++E +IL + T +SL+++DE+GRGT THDG++I++A L+Y
Sbjct: 844 RIGSHDDLLNAKSTFQVEMSEVLHILNSSTPRSLLLLDEVGRGTGTHDGLSISFAILNYF 903
Query: 901 --LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
L +VLF+THY + I +K + YH+SY+ H+ P + + +V +LYK
Sbjct: 904 VYLADNCPLVLFITHYSALCQIDSKL---IANYHMSYIEKHQ---PGEKWT--NVIFLYK 955
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+V G + +S+GF VA+L+ +P I+RA ++ E +SS+ N
Sbjct: 956 LVLGQAHNSYGFNVAKLSNIPTEIINRAFEVSE--EKILSSKHHN 998
>gi|146420360|ref|XP_001486136.1| hypothetical protein PGUG_01807 [Meyerozyma guilliermondii ATCC
6260]
Length = 960
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 307/971 (31%), Positives = 491/971 (50%), Gaps = 139/971 (14%)
Query: 59 PPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRF 118
PP K SP T+ I ++ T KK TPL+QQ ++LK +YPD +L I+VGYK++F
Sbjct: 65 PPSIASSIKKSPKTV--IGKHANSTKKPKKRTPLDQQFIDLKNEYPDCVLAIQVGYKYKF 122
Query: 119 FGEDAEMAAKVLGIY--------AHLDHN-FMTASIPTFRLNVHVRRLVNAGFKVGVVKQ 169
FG DA +++L I H+ F S+P RL++H++RL+ G KV VV Q
Sbjct: 123 FGVDAVPVSRILNIMFIPGNLTERDATHDKFAYCSVPDNRLHIHLQRLLTNGLKVAVVSQ 182
Query: 170 TETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNV 229
TE+A ++ K G F R ++A+YTKAT E+G G +++ C+
Sbjct: 183 TESAVLREAESSK-GLFLREVTAIYTKATY--------IEEGSG---DFISCIT------ 224
Query: 230 GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR--SGLEAVLLSLSPAELLL-G 286
NG G V V+ TG+++ +F++ S L+ L L P+E+++
Sbjct: 225 ---WNGTSA-------GAVTVQPCTGEIIVEDFSEKEPEALSELQTYLHHLRPSEIIVTD 274
Query: 287 QPLSKQTEKM--LLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQ 344
+K+ +K+ LL G A I EV S E + +++N
Sbjct: 275 NEATKENDKLSRLLKSFGGAR------------ISYKPFDEV-SPIEELLPASIANY--- 318
Query: 345 NMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT 404
+ N Q ++ I +LK F L++I + ++ S M M
Sbjct: 319 ---------------YVTNHSTTTTQCISQLITYLKDFSLDQIFTVPSNVSKFSTKMYMN 363
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L NTL+ LE+ +N+S G+E GTL ++HT T G R+L++WV+ PL D I RLDA
Sbjct: 364 LPGNTLKALEIFQNSS-GTEKGTLFWHLDHTHTKMGRRMLQKWVSKPLIDNASIQERLDA 422
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRS-PDIQRGITRIF 523
+ ES+ +Y N V + E ++ +GR D ++ + +I
Sbjct: 423 I----ESLMNY------------NYAVEVFE--------GIIKKIGRDESDWEKSMIKI- 457
Query: 524 HRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT------SKTLHSALLKRLILTAS 577
H TA S+ + ++ Q + + ID Y+ K + SK L S L+ L AS
Sbjct: 458 HYTANGSQNRVTRKEVVQLLLQFRSV-IDTVYKFKSSFKDSSISKLLQSMFLE-LAELAS 515
Query: 578 SPAV--IGKAAKLLSTVNKEAADQG-DLLNL-MIISNGQFSEVARARKAVQSAKEELDSL 633
+P V + K+ + +E DQ + +L G SE+ + Q+ ++EL +
Sbjct: 516 TPIVNDLLSRVKIEAVYREEVEDQKKEFFDLDSHPHEGIKSELNAISELEQALQDELVEI 575
Query: 634 INMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQ 693
K++ + +++M+VS +LI L + P +W K+++TK RY P+V +
Sbjct: 576 -----KKIIKKPVDYMTVSREPYLIALRGD-SGPQDWLKISATKTVTRYRPPKVSKLYKE 629
Query: 694 LALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL-ATLSRNKNFVRPV 752
L E+L C A+ +FLK+ +Y F ++ +A +DCL +L AT S N + +P+
Sbjct: 630 LLYHQEKLIQQCDEAFATFLKDIDSHYTYFSRLIKIVAEIDCLLSLKATSSSNSGYSKPI 689
Query: 753 FVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQ 811
D I R+PV++ + +V ND + + IITGPNMGGKS Y++Q
Sbjct: 690 LSDKQ---MIKAKRSRNPVIENLTSTLQYVANDIEISYDENRVLIITGPNMGGKSSYVKQ 746
Query: 812 VALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTA 871
VALI +M Q+G ++P SA + + D I RMGA D+I +G STF+ E+ E S I+++ T
Sbjct: 747 VALIALMTQIGCYLPCESAIVGIFDTILVRMGAEDNILKGESTFMVEMLECSTIIKSLTN 806
Query: 872 QSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGT 930
+SLVI+DE+GRGT T DG+AIAY+ + YL+E + + LF+THYP + ++ +V
Sbjct: 807 KSLVILDEIGRGTGTEDGIAIAYSIISYLIEEPRLPLTLFITHYPSLKVLEDTHPKNVAN 866
Query: 931 YHVSYLTSHKVMGPMD-SKSDQ---DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRA 986
YH MG M+ +K+DQ DVT+LY + GV + +G VA+LA +P I++A
Sbjct: 867 YH---------MGFMEVAKADQEWPDVTFLYTLKRGVVSNLYGLNVARLAGIPSEIITKA 917
Query: 987 TVIAAKLEAEV 997
+A L+ ++
Sbjct: 918 FKVAEALKQDI 928
>gi|190359895|sp|A3LU10.3|MSH3_PICST RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
Length = 1025
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 311/1066 (29%), Positives = 512/1066 (48%), Gaps = 154/1066 (14%)
Query: 3 KQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFS-PAKRKVVSSLFPPK 61
+ KQ ISRFF ++T S++++ P Q P K + FS K VV +
Sbjct: 4 RSKQASISRFF-----KSTKSNNSAKNEPAVQHIPKKTGVMLKFSYNNKENVVEGGKDTE 58
Query: 62 TPK------------------------------KPKLSPHTLNPIPTPSSQTTHNKK--- 88
P PK+S L P Q KK
Sbjct: 59 GPHIVGSHVELPGQSVNSVVNSDSIVVNSNLEIDPKISS-VLKRKPDIDIQLKTTKKRSK 117
Query: 89 -YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAH-----LDHNFM 141
TPLE+Q+ EL+ + D +L+I++GYK++ FG+DA++ +K+L I Y F
Sbjct: 118 TLTPLEKQIRELRESHKDKVLVIQIGYKYKMFGDDAKLGSKILDIMYIRGGDDGTRDEFS 177
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA--HGPGKAGPFGRGLSALYTKATL 199
S P F+L+++++RL+ G K+GVVKQ E+A +K + R ++ +YT+ T
Sbjct: 178 YCSFPDFKLHINLKRLLTHGLKIGVVKQLESAIVKTVEKSSKSSDLMKREITGVYTRGTY 237
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
E V + ES Y + +++ L +VAV+ TGD+V
Sbjct: 238 MGDEYVQSSGNSADTESPYYIICINEINQK--------------ELSMVAVQPKTGDIVQ 283
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLL---GQPLSKQTEKMLLAYAGPASNVRVECASRDC 316
F DG R LE L+ L+P+E+++ QP + + + L AS+V++ R
Sbjct: 284 DTFKDGLNRDELETRLMYLNPSEVIVLSSEQPSVETLKTIRLV----ASDVQLLPRKRK- 338
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALT 375
GED + N + D + G ++ + +N
Sbjct: 339 -----------------GEDEVFNGLIEFFDSIDNGKYKHLGDYFSVNFSKHIQSCFYEL 381
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSN-GSEYGTLLHIMN 433
I +L +F L + + + + + S + M L NTL LE+ +N +N S+ GTL+ ++N
Sbjct: 382 INYLSEFKLSNVFTIPDNISNFTNSRKYMVLPNNTLYALEIFQNYTNPASQKGTLIWLLN 441
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G+RLL +WV+ PL ++ I RL A+ ++ G + N+ V
Sbjct: 442 HTRTRFGNRLLNKWVSKPLIEKEKIEERLLAIEDLT---GDF------------NNVVDA 486
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ--LHI 551
++ Q L +G+S D++ + + H AT + + + +Y Q L
Sbjct: 487 LKIQ--------LDKMGKSLDLEELLMKT-HYAATYN-LDKINRRDIYNMLDCFQSVLES 536
Query: 552 DGEYREKVT--SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK-----EAAD-QGDLL 603
+ + +T SKT S LL ++L S + + LL+ +N+ E+ D + +
Sbjct: 537 MNRFEKGITEFSKTKKSPLLTNILLELSEMSKTTVVSNLLNKINRSYVMNESKDPEEQVT 596
Query: 604 NLMIISN-------GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
+ N +FSE+ + K + + L+N+ R+ L L++++ + +
Sbjct: 597 QFFNLDNHNWEDIRSEFSELDKIEKLFE------EELLNI-RRVLKRPQLQYITNNKEPY 649
Query: 657 LIELPANFKV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
LIE+ +V P ++ ++N T R+ S + E+L + C A++ FL
Sbjct: 650 LIEVRNGKQVDELPTDFHRINGTTTVSRFRSERTAQLYIKKQYHKEKLLVNCNVAFNDFL 709
Query: 714 KEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD 773
KE Y F V+ L+ DCL +L S RP+ VD I + GR+P+++
Sbjct: 710 KEIDEQYEFFSKIVKNLSVFDCLLSLTAASLASKNTRPILVDQQ---LIEVQKGRNPIIE 766
Query: 774 TILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
++ N +VPND ++ + + IITGPNMGGKS Y++QVAL+ IM+Q+G ++P A L
Sbjct: 767 SLHNRNDYVPNDIDICYDNKVL-IITGPNMGGKSSYVKQVALLVIMSQIGCYIPCDRATL 825
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
V D I+ RMGASD+I +G STF+ E+ E S I+ + +SLVI+DE+GRGT T DG+A+
Sbjct: 826 GVFDSIFIRMGASDNILKGNSTFMNEMLECSNIIHGISNKSLVILDEIGRGTGTSDGIAL 885
Query: 893 AYATLDYLLEHK-KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
AY+ L YL+E + +VLF+THYP + ++ F V YH+ + HK D
Sbjct: 886 AYSILRYLIESPLRPLVLFITHYPSLHVLEDSFPTVVTNYHMGFQQIHK-----DDNDFP 940
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEV 997
++ +LY +V GV +S+G VA+LA LP S IS A ++ L+ +V
Sbjct: 941 EIIFLYNLVKGVINNSYGLNVAKLAGLPVSVISGAHRVSESLKYKV 986
>gi|90086235|dbj|BAE91670.1| unnamed protein product [Macaca fascicularis]
Length = 583
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/583 (37%), Positives = 334/583 (57%), Gaps = 49/583 (8%)
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
G+LL +++HT T +G R L++WVT PL I+ARLDAVSE+ S S
Sbjct: 5 GSLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESS----------- 53
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
+ + L + PDI+RG+ I+H+ + EF +++ +
Sbjct: 54 ---------------VFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLY----- 93
Query: 546 LQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
H+ E++ + + H S LL+ +IL P ++ L +N++AA GD
Sbjct: 94 ----HLKSEFQAIIPAVNSHVQSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKT 147
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-- 661
L F + + + +Q +++ + RK L + ++++VSG +IE+
Sbjct: 148 ELFK-DLSDFPLIKKRKDEIQGVSDKIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNS 206
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
A +P +W KV STK R+HSP V+ L E+L + C A W FL++F +Y
Sbjct: 207 AVSCIPTDWVKVGSTKAVSRFHSPFVVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYH 266
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDN 779
AV LA +DC+ +LA +++ N+ RP E +I I +GRHPV+D +L D
Sbjct: 267 YLCKAVHHLATVDCIFSLAKVAKQGNYCRPTV---QEERKIIIKNGRHPVIDVLLGEQDQ 323
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
+VPN T+L + E IITGPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+
Sbjct: 324 YVPNSTDLSEDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIF 383
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TRMGA+D+I +GRSTF+EEL + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y
Sbjct: 384 TRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEY 443
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQDVTYLY 957
+ K + LFVTHYP + +++ ++ VG YH+ +L S + P + + VT+LY
Sbjct: 444 FIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESKLDPGEEQVPDFVTFLY 503
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
++ G++ S+G VA+LA +P + +A + +LE ++++
Sbjct: 504 QITRGIAARSYGLNVAKLADIPGEILKKAAHKSKELEGLINTK 546
>gi|367009658|ref|XP_003679330.1| hypothetical protein TDEL_0A07870 [Torulaspora delbrueckii]
gi|359746987|emb|CCE90119.1| hypothetical protein TDEL_0A07870 [Torulaspora delbrueckii]
Length = 995
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 297/992 (29%), Positives = 487/992 (49%), Gaps = 147/992 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------A 134
K TPL+QQV +LK D LL++ VGYK++ F +DA +A++VL I
Sbjct: 107 KLTPLDQQVKDLKEANMDKLLVVRVGYKYKCFAQDAIIASQVLQIKLIAGKLTFDGSSSQ 166
Query: 135 HLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP--GKAGPFGRGLS 191
DH F S P RL+VH+ RLV KVGVV+Q+ET+AIK + K+G F R ++
Sbjct: 167 DFDHKQFAYCSFPENRLHVHLERLVRRDLKVGVVEQSETSAIKKYSKDANKSGVFVREVT 226
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
+TKAT G++ + ++ + K+ N R +++V
Sbjct: 227 NTFTKATYGINNTFSSDSRRILGDTCSIWSLL-----LKKVNNK-------YRFRLLSVS 274
Query: 252 ISTGDVVYGEFNDG-FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
+++G++++ +F D + LE L P EL++G+ L E++
Sbjct: 275 LNSGEIIHDDFEDSEYSTEKLEIRARYLEPKELVIGENLPLHLERLF------------- 321
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
RDC I AE+ + DTL G+ P+ A
Sbjct: 322 -NQRDCIIHK---AEITREPQPQTHDTLKK------------------AGV--SPEYA-D 356
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
A L +LK +G E+I+ + ++++ + M L++NTL+ L++ N+ G+L
Sbjct: 357 AFELLFNYLKDYGNEQILLIYSAYQPFASKAYMLLNSNTLESLDIFTNDGGK---GSLFW 413
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T +GSR+L+ WV PL +++ I RLDAV I + + +
Sbjct: 414 LLDHTRTSFGSRILKEWVLRPLLNQSEIEERLDAVECIKKEINNV--------------- 458
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
F+ L+ +L + + D+ R + RI + + E A + KQ+ QL
Sbjct: 459 -------FFEALNQMLKN---TTDLLRTLNRIAYGNTSRKEVYAFL-------KQINQLE 501
Query: 551 IDGEYREKVTSKTL---------HSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
E K S+ + +S+LL R++ + + K + L S +N A + D
Sbjct: 502 HHFEIHSKYLSQQVVAQSGQIKQNSSLLTRILSEMMTLSQKSKVSLLFSMINVSAVMEKD 561
Query: 602 ----LLNLMIISNGQF--SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT 655
+ ++N S + R R+ + S ++EL +N RK L +L + +
Sbjct: 562 SEKQITEFFNLNNYDHPDSIIQRLRE-IDSVQDELTEELNCIRKTLKRPHLTYK--DNVD 618
Query: 656 HLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
+LIE+ +P +W KVN+TK R+H+P ++ L++L + L ++ FL
Sbjct: 619 YLIEVRNTQVKDIPSDWVKVNNTKMISRFHTPNIIQLLEKLQYQKDLLLRDANTEYEHFL 678
Query: 714 KEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD 773
Y + + + D L ALA S N N+VRP + I + R+PV++
Sbjct: 679 SRIVEEYGPLRNFINYIGTYDSLLALAATSCNSNYVRPKISSRKQF--IRATNARNPVIE 736
Query: 774 TILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
++ + +VPN+ N+ E I+TGPNMGGKS Y+RQVAL+ I+AQ+GSFVPA S EL
Sbjct: 737 SLDV-QYVPNNINMSEENGKVLILTGPNMGGKSSYVRQVALLVILAQIGSFVPADSLELG 795
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
+ D ++TR+GA D+I +G STF E+ E IL+NCT +SL+++DE+GRGT T DG AIA
Sbjct: 796 LFDNVFTRIGAFDNILRGESTFKVEMLEILSILQNCTNKSLLLLDEVGRGTGTEDGKAIA 855
Query: 894 YATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD 952
L+Y L K+C ++LF THY + I++ + Y + Y+ + + ++
Sbjct: 856 STLLEYFLTEKECPLILFTTHYTMLGMIESPI---LRNYFMDYVEERR-----EGENWPS 907
Query: 953 VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIA--AKLEAEVSSRVQNRSAKRDL 1010
V LYK+ PG++ +S+G VA+LA + + I+RA I+ ++E E+S RD
Sbjct: 908 VVLLYKLKPGMTSNSYGLNVARLAHIDKAIINRAYDISEDTRMEFELS---------RD- 957
Query: 1011 LVKLSDQEQEAQENMPVSPESFYLGRVEASED 1042
L+ Q + + SP+ LG +E ED
Sbjct: 958 -TSLASQMKSIMSSSTNSPKQMLLGLLELQED 988
>gi|448521652|ref|XP_003868541.1| Msh3 protein [Candida orthopsilosis Co 90-125]
gi|380352881|emb|CCG25637.1| Msh3 protein [Candida orthopsilosis]
Length = 1011
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 301/1014 (29%), Positives = 498/1014 (49%), Gaps = 133/1014 (13%)
Query: 19 QTTASSSA-SSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKKPKLSPHTLNPIP 77
TTAS + +SP P SF +K S++ PP+T + +P+ +
Sbjct: 66 HTTASDTPITSPSPATPVSSSNSNILESFQYSKN---SAINPPRTKRD---APNLITK-- 117
Query: 78 TPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--AH 135
++ + K TPLE Q++EL + D +L+I+VGYK++ FGE+A +K L I
Sbjct: 118 ESKAKKSRTTKLTPLENQILELTELHLDKILLIQVGYKYKVFGENARHVSKCLNIMYIPS 177
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA-HGPGKAGP-FGRGLSAL 193
D F S P RL+++++R++N+G KVG+VKQ E+A +K GK+G R ++ +
Sbjct: 178 SDSRFSYCSFPDTRLHINLQRILNSGVKVGIVKQVESAIVKEIDKVGKSGDVMKREVTGV 237
Query: 194 YTKATLEAAEDVGGGEDGCGGE---SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
YTK T + E VG E +NY++C+ + D VVAV
Sbjct: 238 YTKGTYMSDEFVGSNLIPNSVEEEHNNYIICI---------------NEVTDREFAVVAV 282
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL---GQPLSKQTEKMLLAYAGPASNV 307
+ TG+++Y F D R +E LL L P+E+++ ++ T K L
Sbjct: 283 QPLTGEIIYDVFTDDISREEMETRLLYLRPSEVIVINNDDEINATTMKCL---------- 332
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL 367
+ + + I V + + +S+ D M N P
Sbjct: 333 --KLVNHELKIEHKKTGHV-----DFSDYLISDMVDYYM---------------QNFPSS 370
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSN-GSEY 425
+ I +L +F L + + + + + + M L ANTL LE+ N+++ S
Sbjct: 371 IQECFYKLIVYLAEFKLSNVFTISQNITTFKDARKYMILPANTLTALEIFTNSTDPKSPR 430
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
GTL ++NHT T +GSRLL +W++ PL D+ I R DAV + +GS
Sbjct: 431 GTLEWLLNHTRTRFGSRLLHKWISKPLIDKEKIEERYDAV----QGLGS----------- 475
Query: 486 EKNSDVTIVEPQFYYILSSVLTSL---GRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
+F +++ S++ L G++ D++ + +I + T+T S I Q L
Sbjct: 476 -----------EFNHVVDSLMKQLEKIGKTLDMEELLIKIHYSTSTQSTRINRKQVFLLL 524
Query: 543 GKQLQQLHIDGEYREKVTSKTLH--SALLKRLILTASSPAVIGKAAKLLSTVN------- 593
L + + + + S +L+ S L+ ++ A G ++ +N
Sbjct: 525 QSLNDLLQLVKSFAKTIRSSSLNLASPLIVNMLNGLLDSADAGIVENFINMMNPSYLFNE 584
Query: 594 -KEAADQG----DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEF 648
K+ +Q +L N + N +F+E+ + ++ EEL + R+ L L +
Sbjct: 585 SKDLFEQKSSFFNLQNGYDVINHEFAEIKNVEQLLE---EELVRV----RQLLQRPQLNY 637
Query: 649 MSVSGITHLIEL---PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI-V 704
++ + +LIE+ A +P ++ K+N T R+ + E+ + L +L +EE+ +
Sbjct: 638 VTSNREPYLIEVRNGKAVDSLPPSFIKINGTATVSRFRNKEI-SNLYKLKQYHEEMLVQK 696
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHI 764
C A+ FL+ Y FQ V+ LA LDCL ++ S N VRP DD + I +
Sbjct: 697 CDEAFVEFLQSLDSQYGFFQKIVKHLATLDCLLSITAASVLNNQVRPTLTDD---LTIEV 753
Query: 765 CSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
RHP++D L D +V N+ N+ + IITGPNMGGKS Y++ VAL IM Q+G +
Sbjct: 754 EQARHPIIDQ-LRDGYVANNINIQYDINRALIITGPNMGGKSSYVKMVALFTIMTQIGCY 812
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
+P SA + + D ++ RMGASD+I +G STF+ E+ E S I++ T +SLVI+DE+GRGT
Sbjct: 813 LPCKSAIMGIFDSVFIRMGASDNILKGNSTFMTEMLECSNIIQRLTTRSLVILDEIGRGT 872
Query: 885 STHDGVAIAYATLDYLLEHK-KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
T DG+A+AYA L Y +E + K ++LF+THYP I ++ ++ G V YH+ + +K G
Sbjct: 873 GTTDGIALAYAILKYFIESESKPLLLFITHYPSIHILEHEYPGEVINYHMGFEEINKENG 932
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEV 997
+V +LY + GV +S+G VA+LA +P I+ A ++ L+ E+
Sbjct: 933 KF-----PEVIFLYDLCRGVVNNSYGLNVAKLAGIPEQVITNAYEVSEDLKHEI 981
>gi|149240223|ref|XP_001525987.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|190359845|sp|A5DYV8.1|MSH3_LODEL RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|146450110|gb|EDK44366.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 993
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 310/1066 (29%), Positives = 515/1066 (48%), Gaps = 153/1066 (14%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSS-----ASSPRPPQQTPPPKIAATVSFSPAKR---- 51
M +KQ IS FF+ ++ ++ + +SSP + I +T SP +
Sbjct: 1 MASKKQSTISLFFSSQTRKSPGRDAKKNDISSSPFNAASSTNNSIGSTPRVSPIAKFQYN 60
Query: 52 KVVSSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNK-------KYTPLEQQVVELKTKYP 104
K S+L P+ ++S TLN + H K K TPLE Q+++L +++P
Sbjct: 61 KSTSTLHENTNPRVKRVS--TLNV----DVEKEHKKIKRARSTKLTPLESQILQLLSEHP 114
Query: 105 DVLLMIEVGYKFRFFGEDAEMAAKVLGIY---AHLDHNFMTASIPTFRLNVHVRRLVNAG 161
D +L+I+VGYK++ +GEDA A+ L I + D F S P RL+++++R++N G
Sbjct: 115 DKILLIQVGYKYKVYGEDARHVARCLNIMFISSSTDPTFSYCSFPENRLHINLQRILNTG 174
Query: 162 FKVGVVKQTETAAIK-AHGPGKAGPF-GRGLSALYTKATLEAAEDVGGGEDGCGGES-NY 218
KVGVVKQ E+A IK GK+G R L+ +YT+ T E + G + E Y
Sbjct: 175 VKVGVVKQMESAIIKEVDKIGKSGDLMKRELTGVYTRGTYMNDEFIDSGVNSPEQEELGY 234
Query: 219 LVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSL 278
+VCV +I F +VA++ TG+++Y +F D LE LL L
Sbjct: 235 IVCV-------NEISRYQFA--------IVAIQPLTGEIIYDDFTDDVSHDELETRLLYL 279
Query: 279 SPAE-LLLG--------QPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSL 329
P+E LLLG + G ++ + + ++ CF
Sbjct: 280 RPSEVLLLGCGGNESNNNNNNNSNNSSNNNDNGTDADAQNQTSTLQCF------------ 327
Query: 330 YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL--------AVQ-ALALTIRHLK 380
L N N+ + + + ++ ++N L VQ ++ +++L+
Sbjct: 328 ------QKLVN---HNIKIERKPKGLNNLKAVLNAAALNFYRELLEPVQVCVSELVKYLE 378
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+F L I + + M L A+T+ LE+ +N+ N + GTL ++NHT T +G
Sbjct: 379 EFNLSNIFTVIENVSKFDSKKTMILPASTMLSLEIFQNSENSTTKGTLFSLLNHTKTPFG 438
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL WV+HPL D++ I R AV ++ S G H F
Sbjct: 439 MRLLESWVSHPLIDKDKIEERYQAVEDL-----------STGSH-------------FND 474
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ--LHIDGEYREK 558
LS +L +G++ D++ +I + T T S + + ++ + Q L ++ +
Sbjct: 475 CLSRLLQKIGKNLDLESIAIKIHYSTTTRSLATKINRKDIFMMLLMYQSALQFVSQFEKT 534
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE--AADQGDL-----------LNL 605
+ + L S LLKR++ A + + +N +Q +L +
Sbjct: 535 IKASNL-SPLLKRVLDNLLQLANTDTVDRFMDMINPSYLLGEQQNLHQSSRSTREQKVKF 593
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL---PA 662
++NG F E+ R + + K L+ + +K L L +++ +G +LIE+ A
Sbjct: 594 FNLNNG-FEEINRELAEIMNVKMLLEEELVKVKKLLQRPQLNYVTSNGEPYLIEVRNGKA 652
Query: 663 NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
+P+++ K+N T R+ S E+ E L C A+++FL E +Y
Sbjct: 653 VESLPIDFIKINGTTTVSRFRSKEIAHLYKMKQYHEEVLNNRCDEAFNTFLNELDSHYGF 712
Query: 723 FQAAVQALAALDCLHALATLSR-NKN-FVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
FQ + LA LDCL +LA +S N N V+P D+ + I + + RHP+++ L D +
Sbjct: 713 FQGITKNLAVLDCLLSLAAVSNSNSNTHVKPNLSDE---LIIDVKNARHPIIEH-LRDGY 768
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
V ND ++ + +ITGPNMGGKS Y++ VAL+ IM Q+G ++P +A + + D I
Sbjct: 769 VANDIDIRYDSNRVLVITGPNMGGKSSYVKMVALLIIMTQIGCYIPCEAATIGIFDSILI 828
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGASD++ +GRSTF+ E+ E S I++ T +SLVI+DE+GRGT + DG ++AYA L YL
Sbjct: 829 RMGASDNLLKGRSTFMTEMLECSNIIQKLTPRSLVILDEIGRGTGSIDGYSLAYAILRYL 888
Query: 901 LEHK-KCMVLFVTHYP------------KIADIKTKFTGS--VGTYHVSYLTSHKVMGPM 945
+E K K +VL +THY K A + TG V +Y++ Y ++ P
Sbjct: 889 VESKLKPIVLCITHYTGLLSETEDEKFDKDAKDENLDTGDDVVKSYYMGY---EEITQP- 944
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAA 991
+ ++ +LY + PGVS +S+G +VA++A LP + A ++++
Sbjct: 945 -GQVFPEIVFLYNLCPGVS-NSYGLQVAKMAGLPKKVLLEAYLMSS 988
>gi|365761771|gb|EHN03407.1| Msh3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1015
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 281/950 (29%), Positives = 469/950 (49%), Gaps = 138/950 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---------------- 133
TPL+QQV +LK + D +L+I VGYK++ F EDA +++L I
Sbjct: 130 TPLDQQVKDLKMYHTDKVLVIRVGYKYKCFAEDAITVSRILHIKLVPGKLTIDESNPQDA 189
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH--GPGKAGPFGRGLS 191
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H K+G F R +S
Sbjct: 190 SH--RQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDAAANKSGVFERKIS 247
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVC---VVDDDGNVGKIRNGVFGDGFDVRLGVV 248
++TKAT G SN+++ ++ D ++ + ++ + ++
Sbjct: 248 NVFTKATF-------------GVNSNFVLKGKRILGDTSSIWALSRILYQEKM-ANYSLI 293
Query: 249 AVEISTGDVVYGEFND-GFLRSGLEAVLLSLSPAELLLG-QPLSKQTEKMLLAYAGPASN 306
+V +++G+VVY EF + L+A + L P E+L+ + L EK+ + G + N
Sbjct: 294 SVNLNSGEVVYDEFEELNHATEKLQARIKYLQPIEVLVDTENLPSHVEKL---FKGISCN 350
Query: 307 VRVECASRDCFIGGGALAEVMSLYENM---GEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
+ L++NM ED + + E N + +
Sbjct: 351 L---------------------LHKNMPDLQEDVVLSIEVMN-------------DKLRL 376
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
P L + + H+ ++ E++M + + + + + M L NTLQ L++ ++G
Sbjct: 377 SPSL-IPLIHKLYSHMIEYNNEQVMLIPSIYAPFASKIHMLLDPNTLQSLDIF---THGG 432
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L +M+HT T +G R+LR+W+ +PL D + I RLDA+ I + + ES+ Q
Sbjct: 433 GKGSLFWLMDHTRTSFGFRMLRKWIFNPLTDVDKIEERLDAIECITSEINNNIFFESLNQ 492
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LY 541
L +PD+ R + RI + T + E ++ I
Sbjct: 493 ------------------------MLSHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFV 528
Query: 542 AGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
++ Q ++ +++ S LL +L + + L+ +N A + +
Sbjct: 529 EHFKVHQSYLSEQFKSSEGRICKKSLLLFKLFSELNQLLSSTQLPYFLTMINVSAVMEKN 588
Query: 602 ----LLNLMIISNGQFSE----VARARKAVQSA-KEELDSLINMCRKQLGMRNLEFMSVS 652
+++ ++N SE + R + V++ KEEL + RK L +L F
Sbjct: 589 PDRQIMDFFNLNNYDHSEGIISIQRDSELVRTQLKEELIQI----RKYLKRPHLNFRD-- 642
Query: 653 GITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ +LIE+ + +P +W KVN+TK R+ +P QL + L +
Sbjct: 643 EVDYLIEVKNSQIKDLPDDWIKVNNTKMVSRFSTPMTQKLTQQLQYHKDLLMRESELQYK 702
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+FL + Y E + LA DC+ +LA S N N+VRP FV+D + + + R+P
Sbjct: 703 TFLNKITAEYTELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNDQQAIIAK--NARNP 760
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++++ + +V ND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA
Sbjct: 761 IIESLDV-QYVANDIMMSPEHGRISIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEI 819
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L + + + TR+GA D I G STF E+ + YIL+NC +SL+++DE+GRGT THDG+
Sbjct: 820 RLSIFENVLTRIGAHDDILNGDSTFKVEMLDILYILKNCNGRSLLLLDEVGRGTGTHDGI 879
Query: 891 AIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKS 949
AI+YA + Y + C ++LF TH+P + +IK+ + YH+ Y+ K ++
Sbjct: 880 AISYALIKYFSDLNNCPLILFTTHFPMLGEIKSPL---IRNYHMDYVKEQK-----SGEN 931
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
V +LYK+ G++ +S+G VA+LA+L I+RA +I+ +L+ E ++
Sbjct: 932 WMSVIFLYKLKKGLTYNSYGMNVAKLARLDKDIINRAFIISEELQKEAAN 981
>gi|40225466|gb|AAH11817.1| MSH3 protein, partial [Homo sapiens]
Length = 848
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 250/729 (34%), Positives = 379/729 (51%), Gaps = 81/729 (11%)
Query: 44 VSFSPAKRKVV---SSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELK 100
VS +KR++ ++LF S L + S+ YTPLE Q +E+K
Sbjct: 172 VSSEDSKRQINQKDTTLFDLSQFGSSNTSHENLQKTASKSANKRSKSIYTPLELQYIEMK 231
Query: 101 TKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNA 160
++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT RL VHVRRLV
Sbjct: 232 QQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAK 291
Query: 161 GFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG----------GED 210
G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV E
Sbjct: 292 GYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPLIKLDDAVNVDEI 350
Query: 211 GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV+ F D RS
Sbjct: 351 MTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVVFDSFQDSASRSE 404
Query: 271 LEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE + SL P ELLL LS+QTE ++ + + +RVE F A V
Sbjct: 405 LETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYFEYSHAFQAVT 464
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
Y +DT+ Q I GI+N+ + +LA I++LK+F LE++
Sbjct: 465 EFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAIIKYLKEFNLEKM 509
Query: 388 MCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
+ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++HT T +G R L++
Sbjct: 510 LSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKK 569
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
WVT PL I+ARLDAVSE+ S S + +
Sbjct: 570 WVTQPLLKLREINARLDAVSEVLHSESS--------------------------VFGQIE 603
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH- 565
L + PDI+RG+ I+H+ + EF +++ LY H+ E++ + + H
Sbjct: 604 NHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--------HLKSEFQAIIPAVNSHI 654
Query: 566 -SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
S LL+ +IL P ++ L +N++AA GD L F + + + +Q
Sbjct: 655 QSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELF-KDLSDFPLIKKRKDEIQ 711
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRY 682
+E+ + RK L + ++++VSG +IE+ A +P +W KV STK R+
Sbjct: 712 GVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRF 771
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
HSP ++ L E+L + C A W FL++F +Y AV LA +DC+ +LA +
Sbjct: 772 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKV 831
Query: 743 SRNKNFVRP 751
++ ++ RP
Sbjct: 832 AKQGDYCRP 840
>gi|150865109|ref|XP_001384191.2| hypothetical protein PICST_59113 [Scheffersomyces stipitis CBS
6054]
gi|149386365|gb|ABN66162.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 910
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 284/955 (29%), Positives = 477/955 (49%), Gaps = 129/955 (13%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAH-----LDHNF 140
K TPLE+Q+ EL+ + D +L+I++GYK++ FG+DA++ +K+L I Y F
Sbjct: 2 KTLTPLEKQIRELRESHKDKVLVIQIGYKYKMFGDDAKLGSKILDIMYIRGGDDGTRDEF 61
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA--HGPGKAGPFGRGLSALYTKAT 198
S P F+L+++++RL+ G K+GVVKQ E+A +K + R ++ +YT+ T
Sbjct: 62 SYCSFPDFKLHINLKRLLTHGLKIGVVKQLESAIVKTVEKSSKSSDLMKREITGVYTRGT 121
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E V + ES Y + +++ L +VAV+ TGD+V
Sbjct: 122 YMGDEYVQSSGNSADTESPYYIICINEINQK--------------ELSMVAVQPKTGDIV 167
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLL---GQPLSKQTEKMLLAYAGPASNVRVECASRD 315
F DG R LE L+ L+P+E+++ QP + + + L AS+V++ R
Sbjct: 168 QDTFKDGLNRDELETRLMYLNPSEVIVLSSEQPSVETLKTIRLV----ASDVQLLPRKRK 223
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALAL 374
GED + N + D + G ++ + +N
Sbjct: 224 ------------------GEDEVFNGLIEFFDSIDNGKYKHLGDYFSVNFSKHIQSCFYE 265
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSN-GSEYGTLLHIM 432
I +L +F L + + + + + S + M L NTL LE+ +N +N S+ GTL+ ++
Sbjct: 266 LINYLSEFKLSNVFTIPDNISNFTNSRKYMVLPNNTLYALEIFQNYTNPASQKGTLIWLL 325
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
NHT T +G+RLL +WV+ PL ++ I RL A+ ++ G + N+ V
Sbjct: 326 NHTRTRFGNRLLNKWVSKPLIEKEKIEERLLAIEDLT---GDF------------NNVVD 370
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPS----------EFIAVMQAILYA 542
++ Q L +G+S D++ + + H AT + + Q++L +
Sbjct: 371 ALKIQ--------LDKMGKSLDLEELLMKT-HYAATYNLDKINRRDIYNMLDCFQSVLES 421
Query: 543 GKQLQQLHIDGEYREKVT--SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK-----E 595
+ ++ +T SKT S LL ++L S + + LL+ +N+ E
Sbjct: 422 MNRFEK---------GITEFSKTKKSPLLTNILLELSEMSKTTVVSNLLNKINRSYVMNE 472
Query: 596 AAD-QGDLLNLMIISN-------GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
+ D + + + N +FSE+ + K + + L+N+ R+ L L+
Sbjct: 473 SKDPEEQVTQFFNLDNHNWEDIRSEFSELDKIEKLFE------EELLNI-RRVLKRPQLQ 525
Query: 648 FMSVSGITHLIELPANFKV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIV 704
+++ + +LIE+ +V P ++ ++N T R+ S + E+L +
Sbjct: 526 YITNNKEPYLIEVRNGKQVDELPTDFHRINGTTTVSRFRSERTAQLYIKKQYHKEKLLVN 585
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHI 764
C A++ FLKE Y F V+ L+ DCL +L S RP+ VD I +
Sbjct: 586 CNVAFNDFLKEIDEQYEFFSKIVKNLSVFDCLLSLTAASLASKNTRPILVDQQ---LIEV 642
Query: 765 CSGRHPVLDTILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
GR+P+++++ N +VPND ++ + + IITGPNMGGKS Y++QVAL+ IM+Q+G
Sbjct: 643 QKGRNPIIESLHNRNDYVPNDIDICYDNKVL-IITGPNMGGKSSYVKQVALLVIMSQIGC 701
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
++P A L V D I+ RMGASD+I +G STF+ E+ E S I+ + +SLVI+DE+GRG
Sbjct: 702 YIPCDRATLGVFDSIFIRMGASDNILKGNSTFMNEMLECSNIIHGISNKSLVILDEIGRG 761
Query: 884 TSTHDGVAIAYATLDYLLEHK-KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVM 942
T T DG+A+AY+ L YL+E + +VLF+THYP + ++ F V YH+ + HK
Sbjct: 762 TGTSDGIALAYSILRYLIESPLRPLVLFITHYPSLHVLEDSFPTVVTNYHMGFQQIHK-- 819
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEV 997
D ++ +LY +V GV +S+G VA+LA LP S IS A ++ L+ +V
Sbjct: 820 ---DDNDFPEIIFLYNLVKGVINNSYGLNVAKLAGLPVSVISGAHRVSESLKYKV 871
>gi|354545376|emb|CCE42104.1| hypothetical protein CPAR2_806530 [Candida parapsilosis]
Length = 1009
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 287/980 (29%), Positives = 478/980 (48%), Gaps = 123/980 (12%)
Query: 42 ATVSFSPAKRKVVSSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKT 101
+TV+ S KR+ SL K PKK +++ K TPLE Q++EL
Sbjct: 98 STVAPSTTKREAAISLTNHK-PKKQRVT------------------KLTPLENQILELTE 138
Query: 102 KYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--AHLDHNFMTASIPTFRLNVHVRRLVN 159
+PD +L+I+VGYK++ FGE+A+ ++ L I + D F S P RL+++++R++N
Sbjct: 139 LHPDKILLIQVGYKYKVFGENAKHVSRCLNIMYVPNTDPRFAYCSFPDNRLHINLQRILN 198
Query: 160 AGFKVGVVKQTETAAIKA-HGPGKAGPF-GRGLSALYTKATLEAAEDVGGGEDGCGGE-- 215
+G KVG+VKQ E+A IK GK+G R ++ +YTK T + E VG E
Sbjct: 199 SGVKVGIVKQMESAIIKEIDKVGKSGDLMRREVTGVYTKGTYMSDEFVGSNLIPNSVEEE 258
Query: 216 -SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAV 274
+NY+VC+ + D VVAV+ TG+++Y F D R +E
Sbjct: 259 HNNYIVCI---------------NEVTDREFVVVAVQPLTGEIIYDVFTDDVSREEMETR 303
Query: 275 LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMG 334
LL L P+E+++ ++K+ E + + C L E+
Sbjct: 304 LLYLRPSEVVV---INKEEE--------------INATTMKCL----KLVNHELKIEHRK 342
Query: 335 EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
+ + ++ N+D+ + + N P + + +L +F L + + +
Sbjct: 343 VEHVRFDDYLNLDMIDYYSQ--------NFPMSVQECFHELLVYLAEFKLSNVFTIPQNI 394
Query: 395 RSLSGSME-MTLSANTLQQLEVLRNNSN-GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPL 452
+ + + M L ANTL LE+ N ++ S GTL ++NHT + +G RLL +W++ PL
Sbjct: 395 TTFKDARKYMILPANTLTALEIFTNETDPKSPRGTLAWLLNHTRSKFGHRLLNKWISRPL 454
Query: 453 CDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSL--- 509
DR I R DAV E+ F +++ S++T L
Sbjct: 455 VDREKIEERYDAVEELGRG--------------------------FNHVVDSLMTQLEKI 488
Query: 510 GRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH--SA 567
G++ D++ + +I + T S + Q L L + + + + S +L+ S
Sbjct: 489 GKTLDMEELLIKIHYSATTQSTRVNRKQIFLLLQSFNDLLKMVKSFAKTIRSPSLNLTSP 548
Query: 568 LLKRLILTASSPAVIGKAAKLLSTVN-----KEAADQGDLLNLMIISNGQFSEVARARKA 622
L+ ++ A G K +S +N E+ D + + ++
Sbjct: 549 LIVNMLNDLLESAETGIVEKFISVINPSYLFNESKDPFEQKTSFFDLRHGYDDINHEFAE 608
Query: 623 VQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL---PANFKVPLNWAKVNSTKKT 679
+++ + LD + R+ L L +++ + +LIE+ A +P + K+N T
Sbjct: 609 IKNVEHLLDEELVRVRQLLQRPQLNYVTSNREPYLIEVRNGKAVNSLPPTFIKINGTTSV 668
Query: 680 IRYHSPEVLTALDQLALANEELTIV-CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
R+ + E+ + L +L +EE+ + C A+ FL+ Y Q V+ LA LDCL +
Sbjct: 669 SRFRNKEI-SNLYKLKQYHEEMLVQRCDEAFVEFLQNLDSQYGFLQKIVKHLATLDCLLS 727
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIIT 798
+ S N RP+ DD + I + RHP+++ L D +V ND ++ + IIT
Sbjct: 728 ITAASVLNNQARPLLTDD---LVIDVKQARHPIIEQ-LRDGYVANDIDIQYDTNRALIIT 783
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNMGGKS Y++ VAL IM Q+G ++P SA + + D ++ RMGASD+I +G STF+ E
Sbjct: 784 GPNMGGKSSYVKMVALFTIMTQIGCYLPCQSATMGIFDSVFIRMGASDNILKGNSTFMTE 843
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVTHYPKI 917
+ E S I+ T +SLVI+DE+GRGT T DG+A+AYA L Y +E + K ++LF+THYP I
Sbjct: 844 MLECSNIIHRLTPRSLVILDEIGRGTGTTDGIALAYAILKYFIESELKPLLLFITHYPSI 903
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
++ ++ G V YH+ + K G +V +LY + GV +S+G VA+LA
Sbjct: 904 HILEHEYPGEVVNYHMGFEEVDKGSGKF-----PEVIFLYNLCRGVVGNSYGLNVAKLAG 958
Query: 978 LPPSCISRATVIAAKLEAEV 997
+P I+ A ++ L+ E+
Sbjct: 959 IPEQVIANAYKVSEDLKHEI 978
>gi|384490535|gb|EIE81757.1| hypothetical protein RO3G_06462 [Rhizopus delemar RA 99-880]
Length = 636
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/694 (32%), Positives = 371/694 (53%), Gaps = 69/694 (9%)
Query: 247 VVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN 306
+VAV+ STGD++Y F D F+R+ LE LL + P+E+L+ LS TEK++ +
Sbjct: 1 MVAVQPSTGDIIYDTFEDTFMRNELETRLLHIEPSEILVPHVLSTPTEKLIKHLSTGEGA 60
Query: 307 VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
VR+E L + +S+ N +S + + + I+ +PD
Sbjct: 61 VRIEQM---------PLNDTLSVDYNAAVTFIS-------EFYSKSEKAETLPAILELPD 104
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
+ ++ LA IR+LK+F L ++ + S M ++ANTL LEV RNN N E G
Sbjct: 105 IVIKVLAALIRYLKEFDLSSMLHISKRISSFVSKSHMLMNANTLINLEVYRNNINNKEEG 164
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L +++HT T +G R LR+WV PL D ++ R+DA++E+ S +
Sbjct: 165 SLFSVLDHTRTKFGQRQLRKWVGRPLVDIEKLNERVDAINELLISSNPKKNKLL------ 218
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
T L + PD+++G+ RI++ ++P+E + V+ A+L A L
Sbjct: 219 --------------------TLLKQLPDVEKGLCRIYYGRSSPAELVQVLDALL-AASSL 257
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE-AADQGDLLNL 605
++ +++ S LL RL + P++ + ++ A+D+
Sbjct: 258 FSTDVEPQFK---------SELLNRLF--NALPSIRHDVSHYREMIDPTYASDKTKFFK- 305
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK 665
S ++ ++ R + ++ + L + + + NL+++ V+GI L+E+ N K
Sbjct: 306 ---SEAKWPDIPREKNNIKFVEGLLYDHLEELKTMTNLSNLKYVEVAGIEFLLEV-ENTK 361
Query: 666 ---VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
VP +W K++ TK R+HS ++ L + E L ++ A+ L E Y
Sbjct: 362 AKSVPADWIKISGTKAVSRFHSRYIIQQLKEREQHKERLLLLAEKAFKDLLGEISEKYES 421
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVP 782
F+ V LA LDCL +L + N+VRP F ++ +I + GRHP+++ L ++V
Sbjct: 422 FRDVVSCLAQLDCLLSLVATASQANYVRPQFTEER---KIDVKQGRHPIIEK--LTSYVS 476
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND ++ + ++TGPNMGGKS YIRQ+ALI +M Q+GSFVPA SA L +LD IYTRM
Sbjct: 477 NDIQF-SDSQTTMVLTGPNMGGKSSYIRQIALICMMGQIGSFVPAESATLCMLDAIYTRM 535
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD++ +G STF+ EL+E S I+R T +SLVI+DELGRGTSTHDG AIAYA L + ++
Sbjct: 536 GASDNMMRGESTFMVELHETSDIMRLATPRSLVILDELGRGTSTHDGQAIAYAVLQHFIQ 595
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL 936
H + +FVTHYP ++ + +F+ Y++ Y+
Sbjct: 596 HVQSFTVFVTHYPSLSQLAAQFSDKANNYYMDYI 629
>gi|374107480|gb|AEY96388.1| FADR168Cp [Ashbya gossypii FDAG1]
Length = 1032
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 279/960 (29%), Positives = 473/960 (49%), Gaps = 138/960 (14%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA---- 134
P S+ + T L+QQ +LK ++ D +L + VGYK++FF EDA M ++VL I
Sbjct: 130 PRSKRAKPNRLTELDQQFKDLKLQHMDKVLAVRVGYKYKFFAEDAVMVSRVLQIKLVPGK 189
Query: 135 ----------HLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
H F +IP RL VH++RL++ KVGVV+QTET+A+K + +
Sbjct: 190 LTVHETDPADHKHKKFAYCTIPDTRLEVHLQRLMHHNLKVGVVEQTETSAVKKNSGTSSS 249
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNY---LVCVVDDDGNVGKIRNGVFGDGF 241
F R ++ ++T+AT E G + G+S LVC R +
Sbjct: 250 VFSREVTNIFTRATYGINETFGTKDRRVLGDSASVWGLVCK----------RQPSY---- 295
Query: 242 DVRLGVVAVEISTGDVVYGEFNDG-FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY 300
R +V+V +++G+V++ +F + FL LE + +P+E+++G L + EK+
Sbjct: 296 -TRYFLVSVNLNSGEVIFDDFKEERFLTEALETRIKYTNPSEVVVGDGLGSEIEKVFHTS 354
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
+ R+E ++ LYE + + A +G
Sbjct: 355 DSDITLNRIE---------------LVGLYEEIFSEP-----------------HPAFKG 382
Query: 361 IMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNS 420
N+P AL L +L F E ++ +F+ M L ++ ++ L++ N++
Sbjct: 383 --NVP--LQTALMLVHGYLTNFKNESLLFFKENFKPFCSKTHMILPSSAIESLDIFENST 438
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
+ S G+LL +++HT T YG R L+ W+ PL + + I RLDAV I+ +G+
Sbjct: 439 DRSSKGSLLWVLDHTRTNYGLRNLKNWIAKPLINIDQIQQRLDAVQCISTEVGNI----- 493
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ--- 537
+ S+ L D++R + RI + + E ++
Sbjct: 494 --------------------FIESLNNMLRDGQDLERILNRIAYGKTSRREVYLFLRELT 533
Query: 538 --AILYAGK----QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
A L++ + L +G+ R + S+LL + L+
Sbjct: 534 QLATLFSSHHRYIETNVLSANGKIR-------MQSSLLANIFTDLDEYWKQFPIPNFLAM 586
Query: 592 VNKEAA-DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM- 649
+N +AA D+ + + ++ RA + S +++++++I R +L +N+ +
Sbjct: 587 INIDAALDKNP--DRPYVEYFNLTKYDRAEPLI-SKQQDIEAVIGELRDEL--KNIRVIL 641
Query: 650 ------SVSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
I L+E+ VP++W KV STK R+ +P + +L E L
Sbjct: 642 KRPMLNYKDEIDFLVEIRNTQVSSVPVDWVKVASTKAVSRFQTPVTAKLVAKLQYHKELL 701
Query: 702 TIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQ 761
+ ++SF+K G Y + A+ L+ DC+ +LA S N ++VRP F + P
Sbjct: 702 QDLALQEYESFIKRITGEYTSLRKAILHLSTYDCILSLAATSCNVDYVRPKF--NTAPQC 759
Query: 762 IHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQV 821
I++ +GR+P+++++ + ++PND NL+ E + IITGPNMGGKS YIRQVAL+ IMAQ+
Sbjct: 760 INVINGRNPIIESLDV-RYMPNDVNLNREGKKIMIITGPNMGGKSSYIRQVALLVIMAQI 818
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
G +VPA AE + D I+TR+GA D++ + STF E+ E ILR+ T SL+++DE+G
Sbjct: 819 GCYVPAQEAEFSIFDQIFTRIGAYDNLLRNDSTFKIEMTEMVQILRSSTENSLLLLDEVG 878
Query: 882 RGTSTHDGVAIAYATLDYLLE-HKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
RGT THDG++I+YA L Y +E H C ++LF+THY + I++ +G YH+SY+
Sbjct: 879 RGTGTHDGISISYALLRYFIELHNACPLILFITHYASLGSIRSPI---LGNYHMSYIEEK 935
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
+ ++ V +LYK+ G + +S+G VA+LA + I+RA I+ L+ E+ S
Sbjct: 936 R-----PGENWPSVVFLYKLKEGRAHNSYGLNVAKLADIQTGIINRAYKISTMLKQEMES 990
>gi|45188042|ref|NP_984265.1| ADR168Cp [Ashbya gossypii ATCC 10895]
gi|74694200|sp|Q759V4.1|MSH3_ASHGO RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|44982859|gb|AAS52089.1| ADR168Cp [Ashbya gossypii ATCC 10895]
Length = 1032
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 279/960 (29%), Positives = 473/960 (49%), Gaps = 138/960 (14%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA---- 134
P S+ + T L+QQ +LK ++ D +L + VGYK++FF EDA M ++VL I
Sbjct: 130 PRSKRAKPNRLTELDQQFKDLKLQHMDKVLAVRVGYKYKFFAEDAVMVSRVLQIKLVPGK 189
Query: 135 ----------HLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
H F +IP RL VH++RL++ KVGVV+QTET+A+K + +
Sbjct: 190 LTVHETDPADHKHKKFAYCTIPDTRLEVHLQRLMHHNLKVGVVEQTETSAVKKNSGTSSS 249
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNY---LVCVVDDDGNVGKIRNGVFGDGF 241
F R ++ ++T+AT E G + G+S LVC R +
Sbjct: 250 VFSREVTNIFTRATYGINETFGTKDRRVLGDSASVWGLVCK----------RQPSY---- 295
Query: 242 DVRLGVVAVEISTGDVVYGEFNDG-FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY 300
R +V+V +++G+V++ +F + FL LE + +P+E+++G L + EK+
Sbjct: 296 -TRYFLVSVNLNSGEVIFDDFKEERFLTEALETRIKYTNPSEVVVGDGLGSEIEKVFHTS 354
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
+ R+E ++ LYE + + A +G
Sbjct: 355 DSDITLNRIE---------------LVGLYEEIFSEP-----------------HPAFKG 382
Query: 361 IMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNS 420
N+P AL L +L F E ++ +F+ M L ++ ++ L++ N++
Sbjct: 383 --NVP--LQTALMLVHGYLTNFKNESLLFFKENFKPFCSKTHMILPSSAIESLDIFENST 438
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
+ S G+LL +++HT T YG R L+ W+ PL + + I RLDAV I+ +G+
Sbjct: 439 DRSSKGSLLWVLDHTRTNYGLRNLKNWIAKPLINIDQIQQRLDAVQCISTEVGNI----- 493
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ--- 537
+ S+ L D++R + RI + + E ++
Sbjct: 494 --------------------FIESLNNMLRDGQDLERILNRIAYGKTSRREVYLFLRELT 533
Query: 538 --AILYAGK----QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
A L++ + L +G+ R + S+LL + L+
Sbjct: 534 QLATLFSSHHRYIETNVLSANGKIR-------MQSSLLANIFTDLDEYWKQFPIPNFLAM 586
Query: 592 VNKEAA-DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM- 649
+N +AA D+ + + ++ RA + S +++++++I R +L +N+ +
Sbjct: 587 INIDAALDKNP--DRPYVEYFNLTKYDRAEPLI-SKQQDIEAVIGELRDEL--KNIRVIL 641
Query: 650 ------SVSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
I L+E+ VP++W KV STK R+ +P + +L E L
Sbjct: 642 KRPMLNYKDEIDFLVEIRNTQVSSVPVDWVKVASTKAVSRFQTPGTAKLVAKLQYHKELL 701
Query: 702 TIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQ 761
+ ++SF+K G Y + A+ L+ DC+ +LA S N ++VRP F + P
Sbjct: 702 QDLALQEYESFIKRITGEYTSLRKAILHLSTYDCILSLAATSCNVDYVRPKF--NTAPQC 759
Query: 762 IHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQV 821
I++ +GR+P+++++ + ++PND NL+ E + IITGPNMGGKS YIRQVAL+ IMAQ+
Sbjct: 760 INVINGRNPIIESLDV-RYMPNDVNLNREGKKIMIITGPNMGGKSSYIRQVALLVIMAQI 818
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
G +VPA AE + D I+TR+GA D++ + STF E+ E ILR+ T SL+++DE+G
Sbjct: 819 GCYVPAQEAEFSIFDQIFTRIGAYDNLLRNDSTFKIEMTEMVQILRSSTENSLLLLDEVG 878
Query: 882 RGTSTHDGVAIAYATLDYLLE-HKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
RGT THDG++I+YA L Y +E H C ++LF+THY + I++ +G YH+SY+
Sbjct: 879 RGTGTHDGISISYALLRYFIELHNACPLILFITHYASLGSIRSPI---LGNYHMSYIEEK 935
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
+ ++ V +LYK+ G + +S+G VA+LA + I+RA I+ L+ E+ S
Sbjct: 936 R-----PGENWPSVVFLYKLKEGRAHNSYGLNVAKLADIQTGIINRAYKISTMLKQEMES 990
>gi|50543500|ref|XP_499916.1| YALI0A09724p [Yarrowia lipolytica]
gi|74660203|sp|Q6CHE5.1|MSH3_YARLI RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|49645781|emb|CAG83843.1| YALI0A09724p [Yarrowia lipolytica CLIB122]
Length = 990
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 273/936 (29%), Positives = 458/936 (48%), Gaps = 113/936 (12%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDH 138
T K E Q E+K ++ D LL ++VGYK+ +G+DAE+A ++ +L
Sbjct: 130 TKKTKLNATEFQWYEIKKQHRDTLLFVQVGYKYHIYGDDAEIAHAQTRLFLSPGITNLKD 189
Query: 139 --------------NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
+S P R++ + ++LV GFKVG V+Q E AA+K + K G
Sbjct: 190 IGNDGVVQQGSKYIKLAYSSFPVHRIDFYTKQLVEKGFKVGHVQQMEVAALK-NVENKKG 248
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR 244
P R L+ +TK T E GG S+YLV + + G+ +
Sbjct: 249 PMIRELTNTFTKGTY--IESGNGGSVNDVQYSSYLVALHESKGDKPTVT----------- 295
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA 304
++A E+STGDV++ FND +++S LE LL+L+P E+L +S T KM Y
Sbjct: 296 --LLATEVSTGDVIWDSFNDDYVKSELEIRLLTLAPCEIL-NCGVSSSTLKMCQKYMHR- 351
Query: 305 SNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
G LAE+ N+ E+ + + + Q E + ++ +
Sbjct: 352 --------------NKGRLAEM-----NVLEEEVEDPDAQVALFFEGKANAGTCSTVLEL 392
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
P + + T R+L L+ + L +F +GS M LSANT+ LE+ N ++ +
Sbjct: 393 PAMVKTLILATSRYLTHCKLDSLFLLTNNFTRYTGSY-MRLSANTVASLELFANTTDHTA 451
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L ++N LT++GSR L++WV+ PL DR I RL AV I +S+ + E
Sbjct: 452 KGSLFWVLNRCLTVFGSRELKKWVSRPLTDRTAILQRLSAVEAIIKSIYGAESDE----- 506
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+++ ++ L PD+ + + R+ + E +++ +L+ +
Sbjct: 507 -------------LTTLINKLVKLLKPIPDLSKMLMRLHYGQLNRKEVYLLLRELLFVAQ 553
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+ + G + + + + + L + S KLL +N +AA Q + L
Sbjct: 554 EFKP----GSGDKYIDTNPVLGEIFNSLGIHVSD------IEKLLEEINPDAARQDEALT 603
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
+ + + K V++ EL + R +L L++ SV+GI +LIE+ AN
Sbjct: 604 FFVTDPPSLVDRKKDLKKVEA---ELQIELLALRAELNRPKLQYSSVAGIDYLIEV-ANK 659
Query: 665 ---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
K+PL W K++ TK R+ +P + + + + E+L C ++ F +Y
Sbjct: 660 DTKKLPLEWTKISGTKSVSRFRTPTLNSLVKRHEYCVEKLKAACDIEFNMFRSRCATHYE 719
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
F++ V A++ DCL ALA +S +V+ +VD+ I + RH V+ L+ N++
Sbjct: 720 FFRSMVVAMSQFDCLFALAKVSGQSGWVKADYVDEG---GIDLKDSRH-VITEKLMTNYI 775
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
ND + ++TGPNMGGKS +RQ+AL ++A +G +VPAS A++ + D I R
Sbjct: 776 SNDIKIRCP----TVVTGPNMGGKSSLVRQIALSVLLAHIGCYVPASKAQIPITDSILCR 831
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
MGA D+I G+STF+ EL E + ILRN T++SLV++DE+GRGT+T DG+AIA++ L + +
Sbjct: 832 MGAQDNIMSGQSTFMVELCECAEILRNATSKSLVLLDEIGRGTTTTDGIAIAHSVLKHFI 891
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
E + + LF+THYP + ++ + H MD + + YK+ P
Sbjct: 892 EL-EALTLFITHYPLGQLLDSEDSNKCDLVH------------MDITNTNPPIFTYKMKP 938
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEV 997
G + S+G VA LA +P + I+RA + ++ +V
Sbjct: 939 GSATDSYGLNVAGLAGIPQAIINRAEEMGKDMKHDV 974
>gi|344230439|gb|EGV62324.1| hypothetical protein CANTEDRAFT_126075 [Candida tenuis ATCC 10573]
Length = 923
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 272/1017 (26%), Positives = 493/1017 (48%), Gaps = 146/1017 (14%)
Query: 9 ISRFFAPKSNQTTASSS---ASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKK 65
IS+FF P + A + + P + P PK T S +K +
Sbjct: 6 ISKFFKPAKRKLEARDTHVDVNHTEPSNKKPTPKEKETCKASSSKIQ------------- 52
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P+++ + K TPLE+Q+++LK + D LL I+VGYK++F+GEDA +
Sbjct: 53 -------------PAAKVS---KLTPLEKQILDLKDGHSDKLLAIQVGYKYKFYGEDARI 96
Query: 126 AAKVLGIYA--HLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA 183
+K++ I H D F SIP RL+VH+++++ G++VGV+KQ E+ K K
Sbjct: 97 VSKIINIMLIPHTDSRFNYCSIPDNRLHVHLKKILTFGYRVGVIKQIESTISKTMESSK- 155
Query: 184 GPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDV 243
G F R L+ +YT AT E G + ++ VC V+ D
Sbjct: 156 GIFERKLTGVYTSATYMNEEIEDGRKLAIDDDNGQYVCCVN---------------HMDN 200
Query: 244 RLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGP 303
G V ++ TG+++ F D L LE L+ P+E ++ + + M L
Sbjct: 201 STGFVVIKPLTGEIIVDSFEDNDLHHELETRLVYFKPSECII--LCNDEVTTMTLTKLVN 258
Query: 304 ASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
+ N + +RD I L E+ S + G D L N D + +N
Sbjct: 259 SINNLCKVETRD--INKDVLQELESFF---GNDDLDKN--NLFDYYK-----------VN 300
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
L + + +++L+ F L I + ++ + M LS+N L+ LE+ N+++ +
Sbjct: 301 FNSLILNCIHGLVQYLEPFKLNTIFTVPSNIQKFKNDDYMILSSNVLRTLEIFENSTDNT 360
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L+ ++NHT T G R+L +WV+ PL R I R+DA+ ++++
Sbjct: 361 TRGSLIWLLNHTRTKMGERMLFKWVSRPLTSREKIQDRVDALDDLSK------------- 407
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP-----------SEF 532
+F + + S+ + L D+++G+ ++ + +T S+F
Sbjct: 408 -------------EFNHFIDSLTSLLTNDIDLEKGLIKLHYSLSTAKITRSEVYKMLSKF 454
Query: 533 IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTV 592
+++ + K++++L+ + RE ++ L+ A + + +S+
Sbjct: 455 NKILKLVKSFEKEIEKLNGSLKSREL-------KSIFNELLDLAENFDIESIHLNFISST 507
Query: 593 --NKEAADQG------DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
N ++ +Q D N ISN Q +++ + ++ EE ++ + RK + R
Sbjct: 508 YGNSDSKEQKYQYFNLDYHNWEDISN-QNDQISNINQEIE---EETKAVSKILRKPI--R 561
Query: 645 NLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIV 704
++ ++ + + AN VP++W ++N+TK R+ SP + D L E L V
Sbjct: 562 LVKILNQENLIEVRNTQAN-SVPVDWVRINATKSITRFRSPNLQRLNDLLIYNRELLDKV 620
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHI 764
C + FL Y +F + L+ DCL +L + V+P+ ++++ V I
Sbjct: 621 CDRVFLKFLGTINENYFKFSKIIHNLSKFDCLLSLVVTKASG--VKPIVLEENSIVDIK- 677
Query: 765 CSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
R+P+++T L N++ ND ++ + +ITGPNMGGKS YI+ + ++ IM Q+G +
Sbjct: 678 -EFRNPIINT--LTNYITNDAHITSTENRISLITGPNMGGKSSYIKSIGILVIMHQIGCY 734
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
+P SA+L + I+ RMG+ D+I +G+STF+ E+ E IL+N + SL+++DE+GRGT
Sbjct: 735 LPCESAKLSIFKKIFIRMGSFDNIIKGQSTFMIEMIEILNILQNFDSSSLILLDEVGRGT 794
Query: 885 STHDGVAIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
T DG IAY+ + + H + +VLF+TH+ K+ ++ + VG +++ ++
Sbjct: 795 GTFDGYVIAYSIIQHFCGHAESPVVLFITHFHKLTELANEH-KVVGNFYMDFIKK----- 848
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+SD+ + +LYK+VPG+ ++SFG VA+LA +P I RA V + +++ ++ R
Sbjct: 849 ---PESDE-IQFLYKLVPGILDNSFGLNVAKLAGIPEEVIERAKVKSIEMKNDMDIR 901
>gi|156835926|ref|XP_001642215.1| hypothetical protein Kpol_183p2 [Vanderwaltozyma polyspora DSM
70294]
gi|190359850|sp|A7TTQ1.1|MSH3_VANPO RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|156112674|gb|EDO14357.1| hypothetical protein Kpol_183p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 1023
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 284/950 (29%), Positives = 465/950 (48%), Gaps = 136/950 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA-----HLDHN--- 139
K TPL+QQV +LK + D +L+I VGYK++ F +DAE+ +K+L I +D +
Sbjct: 134 KLTPLDQQVKDLKLLHMDKILVIRVGYKYKCFAQDAEIVSKILHIMLIPGKLTIDESNPQ 193
Query: 140 ------FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK--AHGPGKAGPFGRGLS 191
F S P RL VH+ LV+ KV VV+Q+ET+AIK ++ K F R +S
Sbjct: 194 DSNYRQFAYCSFPDIRLKVHLETLVHNNLKVAVVEQSETSAIKKNSNASSKNSVFERKIS 253
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
+YTKAT G+ N + + + + KI + F +++V
Sbjct: 254 GVYTKATFGINSAFSSNRKNVLGQYNSIWII--NFSEIDKINSSFF---------MISVN 302
Query: 252 ISTGDVVYGEFNDGFLR-SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
+++G+++Y F LE + L+P E+L +S EK+ L G S +
Sbjct: 303 LNSGEIIYDTFECSTTSIENLETRIKYLNPIEVL---TVSALPEKVKLRLHGSNSTI--- 356
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
L ED + ++ E+ N + +G +N+ +
Sbjct: 357 --------------------------LLKEKEDIDKEIMEEIN--KSTKG-LNLSAELFE 387
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE--YGTL 428
+ + ++L ++ E ++ + +++ + M L+A ++ L + G E G+L
Sbjct: 388 LVPVLYKYLTEYNNEELLLISENYKPFASKKHMVLNAAAIESLGIF-----GEEGGKGSL 442
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
+++HT T +GSR LR W+ HPL D+ I RLDAV I + +
Sbjct: 443 FWLLDHTRTSFGSRKLREWILHPLLDKKEIEDRLDAVDCIIHEVSNI------------- 489
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ- 547
F+ L+ +LT++ PD+ R I RI + T + E I Y KQ++
Sbjct: 490 ---------FFESLNKMLTNV---PDLLRTINRIAYGTTSRKE-------IYYFLKQMKS 530
Query: 548 -----QLHIDGEYREKVTSK-TLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
QLH + + V++ +H SALL L+ +S +LS +N + +
Sbjct: 531 FSDHFQLHSNYLNSQVVSNDGRIHKSSALLTNLLTEITSGLKEINIENILSMINVSSVME 590
Query: 600 GD-------LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
D NL + + E+ + + + K EL ++ RK L +L +
Sbjct: 591 KDTYKQVSEFFNLNYYDHAE--EIIKIQGNINEVKNELAEELSSIRKILKRPHLNYKD-- 646
Query: 653 GITHLIEL--PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ +LIE+ +P +W VN TK RYH+P +++L + L + +
Sbjct: 647 EMDYLIEVRNTQTKGLPSDWIVVNRTKMISRYHTPTSRKLIEKLQYQKDILYQETQKEYF 706
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
F+K Y + +A DC+ ALA+ S+N N+VRPV D+ + + + R+P
Sbjct: 707 QFVKRIKNDYFALNKIINHIATYDCILALASTSQNMNYVRPVLTDESQFIDAK--NARNP 764
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++++ + N+VPND NL IITGPNMGGKS YIRQVAL+ I+AQVGS+VPA
Sbjct: 765 IIESLDI-NYVPNDVNLSHSAGKFLIITGPNMGGKSSYIRQVALLVILAQVGSYVPADFM 823
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
+ + D I TR+GA D++ +G+STF EL E I++N T SL+++DE+GRGTST DG
Sbjct: 824 KTSIFDKILTRIGAYDNLLKGQSTFKVELLEIQNIIKNKTENSLLLLDEVGRGTSTEDGK 883
Query: 891 AIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKS 949
AI+Y+ +DY + C +VLF THYP + I +K S Y++ ++ K + +
Sbjct: 884 AISYSIVDYFINLPVCPLVLFTTHYPFLGSINSKILKS---YYMDFVEQKK-----EGED 935
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
+ +LYK+ G+++SSFG VA+LAQ+ I+ A I+ K+ E +
Sbjct: 936 WPSIVFLYKLRSGITDSSFGLNVARLAQIDKDIINHAFSISEKIRQETET 985
>gi|449267844|gb|EMC78740.1| DNA mismatch repair protein Msh3, partial [Columba livia]
Length = 660
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/647 (34%), Positives = 358/647 (55%), Gaps = 63/647 (9%)
Query: 361 IMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNN 419
I+++ + +L+ I +LK+F LE+++ ++F+ LS E MT+ T++ LE+L+N
Sbjct: 45 ILSLDKPVICSLSAVIAYLKEFNLEKMLYDPSNFKQLSSETEYMTIKGTTMKNLEILQNY 104
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
G+LL +++HT T +G R L++WVT PL + I+ RLDAVSEI S S
Sbjct: 105 MKTK--GSLLWVLDHTKTSFGRRKLKKWVTQPLMKSSEINTRLDAVSEILLSESS----- 157
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI 539
+ + L + PD++RG+ +FH+ + EF ++
Sbjct: 158 ---------------------VFDRIRNLLCKLPDLERGLCSVFHKKCSTQEFFLIVST- 195
Query: 540 LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
L +L ++ + V + S LL+ +L P ++ L +N+EAA
Sbjct: 196 ------LSRLDLEIQSLVPVIHSDVKSPLLQNTLLEI--PELLSPVKHYLKILNEEAAKT 247
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIE 659
GD L F + + ++ +Q ++ + RKQ+ + E+++VSG ++E
Sbjct: 248 GDKTQLFK-DLTDFPVIRKKKEEIQDVLSKIQLHLRDIRKQIKNPSAEYVTVSGQEFMVE 306
Query: 660 LPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+ + K VP +W V+STK R+HSP V+ L E+L + C A W +FL F
Sbjct: 307 VKNSHKSSVPSDWVMVSSTKAVSRFHSPFVIENYRHLNQLREQLVLDCNAEWLNFLDHFS 366
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
+Y AV LA +DCL +LA +++ ++ R S + + TI L
Sbjct: 367 EHYHPVSKAVGHLATIDCLFSLAQVAKQGDYCR--------------ISYKSTMCRTIYL 412
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
+ +L + E IITGPNMGGKS YI+QVALI +MAQ+GS+VPA + + V+DG
Sbjct: 413 IYVL----SLQGDGERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEESTIGVVDG 468
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TRMGA+D+I +GRSTF+EEL + + I+R T++SLVI+DELGRGTSTHDG+AIAYATL
Sbjct: 469 IFTRMGAADNIYKGRSTFMEELRDTAEIIRKATSRSLVILDELGRGTSTHDGIAIAYATL 528
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDV 953
++ + + + LFVTHYP + D++ + VG YH+++L S + GP D ++ + +
Sbjct: 529 EHFIRDVESLTLFVTHYPSVCDLEKVYPEKVGNYHMAFLVNEEESAEQKGPEDGENPEFI 588
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
T+LY++ GVS S+G VA+LA +P + +A + +LE V+ +
Sbjct: 589 TFLYQITKGVSARSYGLNVAKLADIPEEILKKAADKSKELETIVNMK 635
>gi|256270184|gb|EEU05408.1| Msh3p [Saccharomyces cerevisiae JAY291]
Length = 1018
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 272/938 (28%), Positives = 452/938 (48%), Gaps = 116/938 (12%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TPL++QV +LK + D +L+I VGYK++ F EDA +++L I
Sbjct: 131 KLTPLDKQVKDLKMHHRDKVLVIRVGYKYKCFAEDAVTVSRILHIKLVPGKLTIDESNPQ 190
Query: 134 --AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG--KAGPFGRG 189
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H PG K+ F R
Sbjct: 191 DCSH--RQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGASKSSVFERK 248
Query: 190 LSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
+S ++TKAT G++N + + D + GK+ + +++
Sbjct: 249 ISNVFTKATFGVNSTFVLRGKRILGDTNS-IWALSRDVHQGKV----------AKYSLIS 297
Query: 250 VEISTGDVVYGEFNDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVR 308
V ++ G+VVY EF + L L+ + L P E+L+ T+ + L A ++
Sbjct: 298 VNLNNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLVN------TDDLPLHVAKFFKDIS 351
Query: 309 VECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA 368
+ + + ED + + N E I P L
Sbjct: 352 CPLIHKQEY----------------------DLEDHVVQAIKVMN-----EKIQLSPSL- 383
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
++ ++ H+ ++ E++M + + + + + M L N+LQ L++ ++ G+L
Sbjct: 384 IRLVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLLDPNSLQSLDIFTHDGGK---GSL 440
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
+++HT T +G R+LR W+ PL D + I RLDA+ I + + ES+ Q
Sbjct: 441 FWLLDHTRTSFGFRMLREWILKPLIDVHQIEERLDAIECITSEINNSIFFESLNQ----- 495
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQL 546
L +PD+ R + RI + T + E ++ I ++
Sbjct: 496 -------------------MLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKM 536
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----L 602
Q ++ ++ S LL RL + + L+ +N A + + +
Sbjct: 537 HQSYLSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTRLPHFLTMINVSAVMEKNSDKQV 596
Query: 603 LNLMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
++ ++N SE + + ++ +S + +L + RK L L F + +LIE+
Sbjct: 597 MDFFNLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRD--EVDYLIEVK 654
Query: 662 AN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
+ +P +W KVN+TK R+ +P +L + L + FL +
Sbjct: 655 NSQIKDLPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAE 714
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
Y E + LA DC+ +LA S N N+VRP FV+ + + + R+P+++++ + +
Sbjct: 715 YTELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAK--NARNPIIESLDV-H 771
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
+VPND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA L + + +
Sbjct: 772 YVPNDIMMSPENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVL 831
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR+GA D I G STF E+ + +IL+NC +SL+++DE+GRGT THDG+AI+YA + Y
Sbjct: 832 TRIGAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKY 891
Query: 900 LLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
E C ++LF TH+P + +IK+ + YH+ Y+ K + V +LYK
Sbjct: 892 FSELSDCPLILFTTHFPMLGEIKSPL---IRNYHMDYVEEQKT-----GEDWMSVIFLYK 943
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ G++ +S+G VA+LA+L I+RA I+ +L E
Sbjct: 944 LKKGLTYNSYGMNVAKLARLDKDIINRAFSISEELRKE 981
>gi|207347221|gb|EDZ73472.1| YCR092Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1047
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 273/936 (29%), Positives = 453/936 (48%), Gaps = 112/936 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------A 134
K TPL++QV +LK + D +L+I VGYK++ F EDA +++L I
Sbjct: 160 KLTPLDKQVKDLKMHHRDKVLVIRVGYKYKCFAEDAVTVSRILHIKLVPGKLTIDESSPQ 219
Query: 135 HLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG--KAGPFGRGLS 191
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H PG K+ F R +S
Sbjct: 220 DCNHRQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGASKSSVFERKIS 279
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
++TKAT G++N + + D + GK+ + +++V
Sbjct: 280 NVFTKATFGVNSTFVLRGKRILGDTNS-IWALSRDVHQGKV----------AKYSLISVN 328
Query: 252 ISTGDVVYGEFNDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
++ G+VVY EF + L L+ + L P E+L+ T+ + L A ++
Sbjct: 329 LNNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLVN------TDDLPLHVAKFFKDISCP 382
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+ + + ED + + N E I P L ++
Sbjct: 383 LIHKQEY----------------------DLEDHVVQAIKVMN-----EKIQLSPSL-IR 414
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
++ H+ ++ E++M + + + + + M L N+LQ L++ ++ G+L
Sbjct: 415 LVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLLDPNSLQSLDIFTHDGGK---GSLFW 471
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T +G R+LR W+ PL D + I RLDA+ I + + ES+ Q
Sbjct: 472 LLDHTRTSFGLRMLREWILKPLVDVHQIEERLDAIECITSEINNSIFFESLNQ------- 524
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQ 548
L +PD+ R + RI + T + E ++ I ++ Q
Sbjct: 525 -----------------MLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKMHQ 567
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LLN 604
++ ++ S LL RL + + L+ +N A + + +++
Sbjct: 568 SYLSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTRLPHFLTMINVSAVMEKNSDKQVMD 627
Query: 605 LMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-A 662
++N SE + + ++ +S + +L + RK L L F + +LIE+ +
Sbjct: 628 FFNLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRD--EVDYLIEVKNS 685
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
K +P +W KVN+TK R+ +P +L + L + FL + Y
Sbjct: 686 QIKDLPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAEYT 745
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E + LA DC+ +LA S N N+VRP FV+ + + + R+P+++++ + ++V
Sbjct: 746 ELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAK--NARNPIIESLDV-HYV 802
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA L + + + TR
Sbjct: 803 PNDIMMSPENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTR 862
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA D I G STF E+ + +IL+NC +SL+++DE+GRGT THDG+AI+YA + Y
Sbjct: 863 IGAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFS 922
Query: 902 EHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E C ++LF TH+P + +IK+ + YH+ Y+ K + V +LYK+
Sbjct: 923 ELSDCPLILFTTHFPMLGEIKSPL---IRNYHMDYVEEQKT-----GEDWMSVIFLYKLK 974
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G++ +S+G VA+LA+L I+RA I+ +L E
Sbjct: 975 KGLTYNSYGMNVAKLARLDKDIINRAFSISEELRKE 1010
>gi|157285763|ref|NP_010016.2| mismatch repair protein MSH3 [Saccharomyces cerevisiae S288c]
gi|190358898|sp|P25336.2|MSH3_YEAST RecName: Full=DNA mismatch repair protein MSH3; AltName:
Full=Mismatch-binding protein; Short=MBP; AltName:
Full=MutS protein homolog 3
gi|190359865|sp|A6ZTR3.2|MSH3_YEAS7 RecName: Full=DNA mismatch repair protein MSH3; AltName:
Full=Mismatch-binding protein; Short=MBP; AltName:
Full=MutS protein homolog 3
gi|285810777|tpg|DAA07561.1| TPA: mismatch repair protein MSH3 [Saccharomyces cerevisiae S288c]
Length = 1018
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 272/936 (29%), Positives = 452/936 (48%), Gaps = 112/936 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------A 134
K TPL++QV +LK + D +L+I VGYK++ F EDA +++L I
Sbjct: 131 KLTPLDKQVKDLKMHHRDKVLVIRVGYKYKCFAEDAVTVSRILHIKLVPGKLTIDESNPQ 190
Query: 135 HLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG--KAGPFGRGLS 191
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H PG K+ F R +S
Sbjct: 191 DCNHRQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGASKSSVFERKIS 250
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
++TKAT G++N + + D + GK+ + +++V
Sbjct: 251 NVFTKATFGVNSTFVLRGKRILGDTNS-IWALSRDVHQGKV----------AKYSLISVN 299
Query: 252 ISTGDVVYGEFNDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
++ G+VVY EF + L L+ + L P E+L+ T+ + L A ++
Sbjct: 300 LNNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLVN------TDDLPLHVAKFFKDISCP 353
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+ + + ED + + N E I P L ++
Sbjct: 354 LIHKQEY----------------------DLEDHVVQAIKVMN-----EKIQLSPSL-IR 385
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
++ H+ ++ E++M + + + + + M L N+LQ L++ ++ G+L
Sbjct: 386 LVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLLDPNSLQSLDIFTHDGGK---GSLFW 442
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T +G R+LR W+ PL D + I RLDA+ I + + ES+ Q
Sbjct: 443 LLDHTRTSFGLRMLREWILKPLVDVHQIEERLDAIECITSEINNSIFFESLNQ------- 495
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQ 548
L +PD+ R + RI + T + E ++ I ++ Q
Sbjct: 496 -----------------MLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKMHQ 538
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LLN 604
++ ++ S LL RL + + L+ +N A + + +++
Sbjct: 539 SYLSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTQLPHFLTMINVSAVMEKNSDKQVMD 598
Query: 605 LMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
++N SE + + ++ +S + +L + RK L L F + +LIE+ +
Sbjct: 599 FFNLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRD--EVDYLIEVKNS 656
Query: 664 --FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+P +W KVN+TK R+ +P +L + L + FL + Y
Sbjct: 657 QIKDLPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAEYT 716
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E + LA DC+ +LA S N N+VRP FV+ + + + R+P+++++ + ++V
Sbjct: 717 ELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAK--NARNPIIESLDV-HYV 773
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA L + + + TR
Sbjct: 774 PNDIMMSPENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTR 833
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA D I G STF E+ + +IL+NC +SL+++DE+GRGT THDG+AI+YA + Y
Sbjct: 834 IGAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFS 893
Query: 902 EHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E C ++LF TH+P + +IK+ + YH+ Y+ K + V +LYK+
Sbjct: 894 ELSDCPLILFTTHFPMLGEIKSPL---IRNYHMDYVEEQKT-----GEDWMSVIFLYKLK 945
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G++ +S+G VA+LA+L I+RA I+ +L E
Sbjct: 946 KGLTYNSYGMNVAKLARLDKDIINRAFSISEELRKE 981
>gi|392300731|gb|EIW11821.1| Msh3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1018
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 272/936 (29%), Positives = 452/936 (48%), Gaps = 112/936 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------A 134
K TPL++QV +LK + D +L+I VGYK++ F EDA +++L I
Sbjct: 131 KLTPLDKQVKDLKMHHRDKVLVIRVGYKYKCFAEDAVTVSRILHIKLVPGKLTIDESNPQ 190
Query: 135 HLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG--KAGPFGRGLS 191
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H PG K+ F R +S
Sbjct: 191 DCNHRQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGASKSSVFERKIS 250
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
++TKAT G++N + + D + GK+ + +++V
Sbjct: 251 NVFTKATFGVNSTFVLRGKRILGDTNS-IWALSRDVHQGKV----------AKYSLISVN 299
Query: 252 ISTGDVVYGEFNDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
++ G+VVY EF + L L+ + L P E+L+ T+ + L A ++
Sbjct: 300 LNNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLVN------TDDLPLHVAKFFKDISCP 353
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+ + + ED + + N E I P L ++
Sbjct: 354 LIHKQEY----------------------DLEDHVVQAIKVMN-----EKIQLSPSL-IR 385
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
++ H+ ++ E++M + + + + + M L N+LQ L++ ++ G+L
Sbjct: 386 LVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLLDPNSLQSLDIFTHDGGK---GSLFW 442
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T +G R+LR W+ PL D + I RLDA+ I + + ES+ Q
Sbjct: 443 LLDHTRTSFGFRMLREWILKPLVDVHQIEERLDAIECITSEINNSIFFESLNQ------- 495
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQ 548
L +PD+ R + RI + T + E ++ I ++ Q
Sbjct: 496 -----------------MLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKMHQ 538
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LLN 604
++ ++ S LL RL + + L+ +N A + + +++
Sbjct: 539 SYLSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTQLPHFLTMINVSAVMEKNSDKQVMD 598
Query: 605 LMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
++N SE + + ++ +S + +L + RK L L F + +LIE+ +
Sbjct: 599 FFNLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRD--EVDYLIEVKNS 656
Query: 664 --FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+P +W KVN+TK R+ +P +L + L + FL + Y
Sbjct: 657 QIKDLPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAEYT 716
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E + LA DC+ +LA S N N+VRP FV+ + + + R+P+++++ + ++V
Sbjct: 717 ELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAK--NARNPIIESLDV-HYV 773
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA L + + + TR
Sbjct: 774 PNDIMMSPENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTR 833
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA D I G STF E+ + +IL+NC +SL+++DE+GRGT THDG+AI+YA + Y
Sbjct: 834 IGAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFS 893
Query: 902 EHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E C ++LF TH+P + +IK+ + YH+ Y+ K + V +LYK+
Sbjct: 894 ELSDCPLILFTTHFPMLGEIKSPL---IRNYHMDYVEEQKT-----GEDWMSVIFLYKLK 945
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G++ +S+G VA+LA+L I+RA I+ +L E
Sbjct: 946 KGLTYNSYGMNVAKLARLDKDIINRAFSISEELRKE 981
>gi|4804|emb|CAA46116.1| ORF YCR1152 [Saccharomyces cerevisiae]
gi|172004|gb|AAA34803.1| MSH3 protein [Saccharomyces cerevisiae]
gi|1907230|emb|CAA42247.1| DNA mismatch repair protein [Saccharomyces cerevisiae]
gi|151943902|gb|EDN62202.1| MutS-like protein [Saccharomyces cerevisiae YJM789]
Length = 1047
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 273/936 (29%), Positives = 453/936 (48%), Gaps = 112/936 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------A 134
K TPL++QV +LK + D +L+I VGYK++ F EDA +++L I
Sbjct: 160 KLTPLDKQVKDLKMHHRDKVLVIRVGYKYKCFAEDAVTVSRILHIKLVPGKLTIDESNPQ 219
Query: 135 HLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG--KAGPFGRGLS 191
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H PG K+ F R +S
Sbjct: 220 DCNHRQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGASKSSVFERKIS 279
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
++TKAT G++N + + D + GK+ + +++V
Sbjct: 280 NVFTKATFGVNSTFVLRGKRILGDTNS-IWALSRDVHQGKV----------AKYSLISVN 328
Query: 252 ISTGDVVYGEFNDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
++ G+VVY EF + L L+ + L P E+L+ T+ + L A ++
Sbjct: 329 LNNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLVN------TDDLPLHVAKFFKDISCP 382
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+ + + ED + + N E I P L ++
Sbjct: 383 LIHKQEY----------------------DLEDHVVQAIKVMN-----EKIQLSPSL-IR 414
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
++ H+ ++ E++M + + + + + M L N+LQ L++ ++ G+L
Sbjct: 415 LVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLLDPNSLQSLDIFTHDGGK---GSLFW 471
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T +G R+LR W+ PL D + I RLDA+ I + + ES+ Q
Sbjct: 472 LLDHTRTSFGLRMLREWILKPLVDVHQIEERLDAIECITSEINNSIFFESLNQ------- 524
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQ 548
L +PD+ R + RI + T + E ++ I ++ Q
Sbjct: 525 -----------------MLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKMHQ 567
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LLN 604
++ ++ S LL RL + + L+ +N A + + +++
Sbjct: 568 SYLSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTQLPHFLTMINVSAVMEKNSDKQVMD 627
Query: 605 LMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-A 662
++N SE + + ++ +S + +L + RK L L F + +LIE+ +
Sbjct: 628 FFNLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRD--EVDYLIEVKNS 685
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
K +P +W KVN+TK R+ +P +L + L + FL + Y
Sbjct: 686 QIKDLPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAEYT 745
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E + LA DC+ +LA S N N+VRP FV+ + + + R+P+++++ + ++V
Sbjct: 746 ELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAK--NARNPIIESLDV-HYV 802
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA L + + + TR
Sbjct: 803 PNDIMMSPENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTR 862
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA D I G STF E+ + +IL+NC +SL+++DE+GRGT THDG+AI+YA + Y
Sbjct: 863 IGAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFS 922
Query: 902 EHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E C ++LF TH+P + +IK+ + YH+ Y+ K + V +LYK+
Sbjct: 923 ELSDCPLILFTTHFPMLGEIKSPL---IRNYHMDYVEEQKT-----GEDWMSVIFLYKLK 974
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G++ +S+G VA+LA+L I+RA I+ +L E
Sbjct: 975 KGLTYNSYGMNVAKLARLDKDIINRAFSISEELRKE 1010
>gi|349576822|dbj|GAA21992.1| K7_Msh3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1047
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 273/936 (29%), Positives = 452/936 (48%), Gaps = 112/936 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------A 134
K TPL++QV +LK + D +L+I VGYK++ F EDA +++L I
Sbjct: 160 KLTPLDKQVKDLKMHHRDKVLVIRVGYKYKCFAEDAVTVSRILHIKLVPGKLTIDESNPQ 219
Query: 135 HLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG--KAGPFGRGLS 191
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H PG K+ F R +S
Sbjct: 220 DCNHRQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGASKSSVFERKIS 279
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
++TKAT G++N + + D + GK+ + +++V
Sbjct: 280 NVFTKATFGVNSTFVLRGKRILGDTNS-IWALSRDVHQGKV----------AKYSLISVN 328
Query: 252 ISTGDVVYGEFNDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
++ G+VVY EF + L L+ + L P E+L+ T+ + L A +
Sbjct: 329 LNNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLIN------TDDLPLHVAKFFKDTSCP 382
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+ + + ED + + N E I P L ++
Sbjct: 383 LIHKQEY----------------------DLEDHVVQAIKVMN-----EKIQLSPSL-IR 414
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
++ H+ ++ E++M + + + + + M L N+LQ L++ ++ G+L
Sbjct: 415 LVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLLDPNSLQSLDIFTHDGGK---GSLFW 471
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T +G R+LR W+ PL D + I RLDA+ I + + ES+ Q
Sbjct: 472 LLDHTRTSFGFRMLREWILKPLIDVHQIEERLDAIECITSEINNSIFFESLNQ------- 524
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQ 548
L +PD+ R + RI + T + E ++ I ++ Q
Sbjct: 525 -----------------MLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKMHQ 567
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LLN 604
++ ++ S LL RL + + L+ +N A + + +++
Sbjct: 568 SYLSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTQLPHFLTMINVSAVMEKNSDKQVMD 627
Query: 605 LMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-A 662
++N SE + + ++ +S + +L + RK L L F + +LIE+ +
Sbjct: 628 FFNLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRD--EVDYLIEVKNS 685
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
K +P +W KVN+TK R+ +P +L + L + FL + Y
Sbjct: 686 QIKDLPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAEYT 745
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E + LA DC+ +LA S N N+VRP FV+ + + + R+P+++++ + ++V
Sbjct: 746 ELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAK--NARNPIIESLDV-HYV 802
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA L + + + TR
Sbjct: 803 PNDIMMSPENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTR 862
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA D I G STF E+ + +IL+NC +SL+++DE+GRGT THDG+AI+YA + Y
Sbjct: 863 IGAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFS 922
Query: 902 EHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E C ++LF TH+P + +IK+ + YH+ Y+ K + V +LYK+
Sbjct: 923 ELSDCPLILFTTHFPMLGEIKSPL---IRNYHMDYVEEQKT-----GEDWMSVIFLYKLK 974
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G++ +S+G VA+LA+L I+RA I+ +L E
Sbjct: 975 KGLTYNSYGMNVAKLARLDKDIINRAFSISEELRKE 1010
>gi|366993294|ref|XP_003676412.1| hypothetical protein NCAS_0D04700 [Naumovozyma castellii CBS 4309]
gi|342302278|emb|CCC70051.1| hypothetical protein NCAS_0D04700 [Naumovozyma castellii CBS 4309]
Length = 1038
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 271/955 (28%), Positives = 466/955 (48%), Gaps = 154/955 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------AHL 136
TPL+QQ+ ELK+ + + LL++ VGYK++ F EDA +A+K+L I A
Sbjct: 154 TPLDQQIQELKSIHKNKLLVVRVGYKYKCFAEDAIIASKILKIKLVPGKLTIDESNPADK 213
Query: 137 DH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG--PGKAGPFGRGLSAL 193
DH F S P RLNVH+ RL+ KVGVV+Q ET+AIK + K+ F R ++ +
Sbjct: 214 DHKQFAYCSFPDTRLNVHLERLIYNNCKVGVVEQAETSAIKKNSQTSNKSQVFERKITGI 273
Query: 194 YTKAT--LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRL-GVVAV 250
++KAT + + D+ GG + G + +D+ K R +++V
Sbjct: 274 FSKATYGVNSPHDLKGGNNLLGNTKSIWALNIDESLAQQK------------RFYSLLSV 321
Query: 251 EISTGDVVYGEFNDGF-LRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRV 309
+++G+V+Y EF + L+ + L P E++ +PL + + + SN +V
Sbjct: 322 NLNSGEVIYDEFFEPLHTLYSLKERIKYLEPVEIVTLKPLPRYVDILF-----NESNCKV 376
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
NE +N + Q + + + +L+
Sbjct: 377 TI-----------------------------NEIENTNEAIQSSLKIVANKLKFSLELSK 407
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
L I +L+++ ERI+ + +F + MTLS +TL+ L++LRN+ E G+LL
Sbjct: 408 LLETLYI-YLQEYNNERILFISTNFAKFLANQHMTLSDSTLEGLDILRNDG---EKGSLL 463
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++HT T +G R LR WV HPL + I RLDA+ I + +
Sbjct: 464 WLLDHTRTSFGLRKLRDWVLHPLRTIDKIEERLDAIECILKEINCI-------------- 509
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
F + +L L PD+ R + RI + + E ++ + G +
Sbjct: 510 --------FLESFNQLLKGL---PDLLRTLNRIAYGHTSKKEVYFFLKQMCSIGDHFKT- 557
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD-------- 601
HS+ +K +L S I K ++LL+++ K+ +
Sbjct: 558 ---------------HSSYIKEQVL--SPDGRINKQSQLLTSILKDIENNYQETHLPQLF 600
Query: 602 -LLNLMIISNGQFSE----------------VARARKAVQSAKEELDSLINMCRKQLGMR 644
++N+ + N + + ++ ++ K +L + + RK LG
Sbjct: 601 AMINVAAVMNKNLENQKTEFFNLNNYDNPDGIIKIQRDIEDVKSDLSAELKHIRKVLGRP 660
Query: 645 NLEFMSVSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
L + I +LIE+ +P +W K+N+T K R+ +P +++L + L
Sbjct: 661 YLNYKD--EIEYLIEVKNTQVTNLPSDWIKINNTLKISRFATPTTTKLVEKLQFHKDLLV 718
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQI 762
+ FL + Y + ++ +A DCL +L+ +S N + RP+F ++ + +++
Sbjct: 719 QEVEKEYQRFLSKINDEYIRLRNIIENIATYDCLLSLSAVSCNIKYTRPIFSNEKQVIKL 778
Query: 763 HICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVG 822
R+P+++++ + N+VPNDT+++ + II+GPNMGGKS YIRQVAL+ I+AQ+G
Sbjct: 779 K--GARNPIIESLDI-NYVPNDTDMNRKDGLINIISGPNMGGKSSYIRQVALLIILAQIG 835
Query: 823 SFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGR 882
SFVPA E+ + D I TR+GA D + +G STF +E+ + +L NCT SLV++DE+GR
Sbjct: 836 SFVPADYMEVSIFDNILTRIGAHDDLLRGESTFKKEMLDVLQVLENCTKDSLVLLDEVGR 895
Query: 883 GTSTHDGVAIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV 941
GT T DG AI+Y+ ++Y +E C ++LF +H+P + IK+ V YH+ Y+ +
Sbjct: 896 GTGTLDGKAISYSLINYFMEETDCPLILFTSHFPILGTIKSPL---VKCYHMDYVEEKR- 951
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
P ++ S VT+LYK+ G + +S+G VA+LA + I+ A I+ ++ E
Sbjct: 952 --PGENWS--SVTFLYKLKSGFTTNSYGLNVAKLASIDKDIINEAYEISESMKNE 1002
>gi|190406508|gb|EDV09775.1| Mismatch repair protein [Saccharomyces cerevisiae RM11-1a]
Length = 1047
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 272/936 (29%), Positives = 452/936 (48%), Gaps = 112/936 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------A 134
K TPL++QV +LK + D +L+I VGYK++ F EDA +++L I
Sbjct: 160 KLTPLDKQVKDLKMHHRDKVLVIRVGYKYKCFAEDAVTVSRILHIKLVPGKLTIDESNPQ 219
Query: 135 HLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG--KAGPFGRGLS 191
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H PG K+ F R +S
Sbjct: 220 DCNHRQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGASKSSVFERKIS 279
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
++TKAT G++N + + D + GK+ + +++V
Sbjct: 280 NVFTKATFGVNSTFVLRGKRILGDTNS-IWALSRDVHQGKV----------AKYSLISVN 328
Query: 252 ISTGDVVYGEFNDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
++ G+VVY EF + L L+ + L P E+L+ T+ + L ++
Sbjct: 329 LNNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLVN------TDDLPLHVTKFFKDISCP 382
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+ + + ED + + N E I P L ++
Sbjct: 383 LIHKQEY----------------------DLEDHVVQAIKVMN-----EKIQLSPSL-IR 414
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
++ H+ ++ E++M + + + + + M L N+LQ L++ ++ G+L
Sbjct: 415 LVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLLDPNSLQSLDIFTHDGGK---GSLFW 471
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T +G R+LR W+ PL D + I RLDA+ I + + ES+ Q
Sbjct: 472 LLDHTRTSFGLRMLREWILKPLVDVHQIEERLDAIECITSEINNSIFFESLNQ------- 524
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQ 548
L +PD+ R + RI + T + E ++ I ++ Q
Sbjct: 525 -----------------MLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKMHQ 567
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LLN 604
++ ++ S LL RL + + L+ +N A + + +++
Sbjct: 568 SYLSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTQLPHFLTMINVSAVMEKNSDKQVMD 627
Query: 605 LMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-A 662
++N SE + + ++ +S + +L + RK L L F + +LIE+ +
Sbjct: 628 FFNLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRD--EVDYLIEVKNS 685
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
K +P +W KVN+TK R+ +P +L + L + FL + Y
Sbjct: 686 QIKDLPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAEYT 745
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E + LA DC+ +LA S N N+VRP FV+ + + + R+P+++++ + ++V
Sbjct: 746 ELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAK--NARNPIIESLDV-HYV 802
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA L + + + TR
Sbjct: 803 PNDIMMSPENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTR 862
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA D I G STF E+ + +IL+NC +SL+++DE+GRGT THDG+AI+YA + Y
Sbjct: 863 IGAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFS 922
Query: 902 EHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E C ++LF TH+P + +IK+ + YH+ Y+ K + V +LYK+
Sbjct: 923 ELSDCPLILFTTHFPMLGEIKSPL---IRNYHMDYVEEQKT-----GEDWMSVIFLYKLK 974
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G++ +S+G VA+LA+L I+RA I+ +L E
Sbjct: 975 KGLTYNSYGMNVAKLARLDKDIINRAFSISEELRKE 1010
>gi|50286559|ref|XP_445708.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661424|sp|Q6FVN6.1|MSH3_CANGA RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|49525014|emb|CAG58627.1| unnamed protein product [Candida glabrata]
Length = 1025
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 280/942 (29%), Positives = 471/942 (50%), Gaps = 147/942 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL------GIYAHLDHN---- 139
TPL++QV +LK D +L+I VGYK++ F +DA +A+ +L G D N
Sbjct: 149 TPLDRQVKDLKLGNMDKVLVIRVGYKYKIFAQDAIIASTILHLQLIPGKVTIDDSNPNDS 208
Query: 140 ----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP--FGRGLSAL 193
F S P RL VH+ RLV +G KV VV+Q+ETA K KA F R ++
Sbjct: 209 KYKQFAYCSFPDVRLKVHLERLVRSGLKVAVVEQSETATTKKFDNSKAKTSVFERKITGT 268
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDV-----RLGVV 248
Y+KAT C E N+ N+ N ++ +V + +
Sbjct: 269 YSKATYAT---------NCEFEVNH--------ENILGTNNSIWALDIEVSDSIYKYYLW 311
Query: 249 AVEISTGDVVYGEF---NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS 305
++++S G+V+Y F D F S +E + L+P+E++ +
Sbjct: 312 SIQLSNGEVIYDSFEESKDNF--SKVETRMKYLNPSEIV----------------SPVVD 353
Query: 306 NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG--NHRSAIEGIMN 363
+ ++ R F+ L Y+ + ED +++P++ N+R
Sbjct: 354 SFPIKLKKR--FLD---LQLCQKNYDILAED---------LNIPKKELLNNR-------- 391
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
++ + R+LK++ E+++ +G+++R S + + L A T+ L+++ SN
Sbjct: 392 ----LIELWHILYRYLKEYSNEKLLNIGSNYRHFSQKISIQLQAQTINNLDLI---SNDD 444
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
GTL I++HT T +G RLL+ W+ PL ++ I RL+A+ I ES S
Sbjct: 445 SKGTLFWILDHTRTPFGKRLLKEWLLRPLLSKDAIVDRLNAIDCILESANSI-------- 496
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI-FHRTATPSEFIAVMQAI--- 539
F+ L+ ++ + PD+ R I R+ F +T+ + + Q
Sbjct: 497 --------------FFESLNQMMKGI---PDLLRTINRVSFGKTSQREVYFLLKQLTGVI 539
Query: 540 --LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA 597
A K ++ I+ T T ++++ ++ + S + +LL +N A
Sbjct: 540 KHFEAHKDYIEVEINSNSGAIKTKSTKLASIMTQMFEFSLSSVI----PQLLLMINVSAV 595
Query: 598 DQGD----LLNLMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
+ D LL ++N SE + + ++ + S K +L + +K L +L +
Sbjct: 596 MEKDQKKQLLGFFHLNNYDNSENIIKMQRDIDSVKAQLHDELQNIKKILKRPHLAYKD-- 653
Query: 653 GITHLIELPANFKV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW 709
+ LIE+ N +V P +W KVN+TK R+ +P ++ L N+ L +
Sbjct: 654 EVDFLIEV-RNTQVKGIPSDWVKVNNTKMISRFLTPRTKELVELLEYQNDLLYNEISKEY 712
Query: 710 DSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRH 769
D FL YY E + + LA DCL +LA +S N + RPVF D +E + I R+
Sbjct: 713 DQFLNRIASYYNEVKTFIMNLAEYDCLLSLAAVSCNVGYTRPVFTDSNEQLIIA-KQARN 771
Query: 770 PVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
P+++++ +D +VPND + + +ITGPNMGGKS YIRQ+AL+ IMAQ+GS+VPA S
Sbjct: 772 PIIESLGVD-YVPNDIEMEKDSGRVLVITGPNMGGKSSYIRQIALMVIMAQIGSYVPAES 830
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
+L V D + TR+G+ D+I QG+STF EL+E I+ +CT+++L+++DE+GRGTST DG
Sbjct: 831 LKLSVFDNVLTRIGSQDNILQGQSTFKVELSETVEIINSCTSKTLLLLDEVGRGTSTRDG 890
Query: 890 VAIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
AIA+A + Y +E ++C +LF TH+ + +K+ S YH++Y+ HK +++
Sbjct: 891 NAIAWALIKYFVEEEQCPFILFTTHFTIVTTVKSPLLKS---YHMNYV-QHK----NENE 942
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIA 990
+ V +LY++ GV++SS+G VA+LA + I+RA +A
Sbjct: 943 NWTTVVFLYQLKAGVTDSSYGLNVAKLAGIDTHIINRAHDVA 984
>gi|403217557|emb|CCK72051.1| hypothetical protein KNAG_0I02660 [Kazachstania naganishii CBS 8797]
Length = 1051
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 280/948 (29%), Positives = 470/948 (49%), Gaps = 131/948 (13%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA-----HLDH---- 138
K TPL++QV LK + D +L++ VGYK++ F EDA + + +L I LD+
Sbjct: 159 KLTPLDEQVRSLKLQNMDKILLVRVGYKYKCFAEDAIIVSSILHIKLVQGKLTLDNSNPH 218
Query: 139 -----NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP-FGRGLSA 192
NF S P RLN+++ RL++ KVG+V+Q+ET+++K K+ F R ++
Sbjct: 219 DSQYKNFAYCSFPDVRLNINLERLIHENLKVGIVEQSETSSLKKQSENKSKSVFEREVTN 278
Query: 193 LYTKAT--LEAAEDVGGGEDGCGGESN--YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
+ +KAT + + E G++ +++ VV + K +V
Sbjct: 279 VVSKATYGINVDKARSSKESPILGDTKSIWILKVVPTSEQLSK-------------YSLV 325
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVR 308
+V +++G+V++ EF+D + S +E L+ + + Y P V
Sbjct: 326 SVNLNSGEVIFDEFSD------------TASSSEQLITR----------VKYLDPIE-VI 362
Query: 309 VECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN-HRSAIEGI---MNM 364
++C+ + L N E Q ++ E+ N H A + + +
Sbjct: 363 LQCSEKHV------------------NRCLKNAECQITEIKEEDNRHLDAFNELKVDVPV 404
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
P+ + +A +L Q+ E I+ + ++R + M M L N + L++ SN +
Sbjct: 405 PETLKELVAHLYHYLHQYNNENILLITDNYRPFTSKMFMLLDGNAMDALDIF---SNEGK 461
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L ++NHT T +GSR LR WV PL + I RLDA+ I+E
Sbjct: 462 KGSLFWVLNHTRTPFGSRQLRNWVKRPLLNTTDIEDRLDAIECISE-------------- 507
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYA 542
++ F+ L+ +L S+ PD+ + RI + + E ++ I L
Sbjct: 508 --------VINDIFFESLNHLLKSI---PDLSHTLNRITYGRTSRREVYYFLKQICSLID 556
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD- 601
+L Q +I+ + S LL + ++L+ VN A + D
Sbjct: 557 HFKLHQSYIENQILLPDGKIPKRSKLLPKWFQEMYEYLKDSNIPRILTMVNVAAVMEKDP 616
Query: 602 ------LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT 655
LNL N +++ ++ ++S ++E++ +N RK L L + +
Sbjct: 617 EKQQIGFLNLNNYDNP--AKIIDIQRNIESIQDEMNVELNNIRKFLKRPYLNYRD--EVD 672
Query: 656 HLIELPANFKV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+LIE+ N +V P +W KVNSTK R+ +P+ L L + L R+ + F
Sbjct: 673 YLIEV-RNSQVKGLPDDWVKVNSTKSVSRFLTPKNTKLLQNLQYQKDLLLQETRSEFLVF 731
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVL 772
L++ Y +Q +A DC+ ALA S N+VRP F + ++ + I GR+ V+
Sbjct: 732 LQKIKAEYTSLNKLIQKIANYDCILALAATSCAINYVRPKF-ETNKGQFVSIVKGRNAVI 790
Query: 773 DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
++ L N+VPND+N++ IITGPNMGGKS YIRQVAL+ +MAQ+GSFVPA S EL
Sbjct: 791 ES-LDRNYVPNDSNMYTNEGKITIITGPNMGGKSSYIRQVALLIVMAQIGSFVPAHSMEL 849
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
+ D I+TR+GA+D++ QG+STF+ E++E +I++ T +SL+++DE+GRGT T DG AI
Sbjct: 850 SLFDNIFTRIGANDNLLQGQSTFMVEMSEILHIIKRATPKSLLLLDEVGRGTGTIDGRAI 909
Query: 893 AYATLDYLLEHKKC-MVLFVTHYPKIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
YA L Y LE C ++LF TH+P I ++ + ++ +++ Y+ K +S
Sbjct: 910 CYAILKYYLELVDCPLILFTTHFPDIGKQLRDTYQKAIKNFYMDYVEEQK-----PGESW 964
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
Q V +LY++ G+SE S+G VA+LA + I+ A ++ K++ E S
Sbjct: 965 QSVIFLYQLKEGLSEDSYGLNVAKLAGIDSEIINSAYQVSRKMKNEES 1012
>gi|448278|prf||1916402A mismatch repair protein
Length = 1046
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 273/936 (29%), Positives = 452/936 (48%), Gaps = 113/936 (12%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------A 134
K TPL++QV +LK + D +L+I VGYK+ F EDA +++L I
Sbjct: 160 KLTPLDKQVKDLKMHHRDKVLVIRVGYKY-CFAEDAVTVSRILHIKLVPGKLTIDESNPQ 218
Query: 135 HLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG--KAGPFGRGLS 191
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H PG K+ F R +S
Sbjct: 219 DCNHRQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGASKSSVFERKIS 278
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
++TKAT G++N + + D + GK+ + +++V
Sbjct: 279 NVFTKATFGVNSTFVLRGKRILGDTNS-IWALSRDVHQGKV----------AKYSLISVN 327
Query: 252 ISTGDVVYGEFNDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
++ G+VVY EF + L L+ + L P E+L+ T+ + L A ++
Sbjct: 328 LNNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLVN------TDDLPLHVAKFFKDISCP 381
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+ + + ED + + N E I P L ++
Sbjct: 382 LIHKQEY----------------------DLEDHVVQAIKVMN-----EKIQLSPSL-IR 413
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
++ H+ ++ E++M + + + + + M L N+LQ L++ ++ G+L
Sbjct: 414 LVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLLDPNSLQSLDIFTHDGGK---GSLFW 470
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T +G R+LR W+ PL D + I RLDA+ I + + ES+ Q
Sbjct: 471 LLDHTRTSFGLRMLREWILKPLVDVHQIEERLDAIECITSEINNSIFFESLNQ------- 523
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQ 548
L +PD+ R + RI + T + E ++ I ++ Q
Sbjct: 524 -----------------MLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKMHQ 566
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LLN 604
++ ++ S LL RL + + L+ +N A + + +++
Sbjct: 567 SYLSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTQLPHFLTMINVSAVMEKNSDKQVMD 626
Query: 605 LMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-A 662
++N SE + + ++ +S + +L + RK L L F + +LIE+ +
Sbjct: 627 FFNLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRD--EVDYLIEVKNS 684
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
K +P +W KVN+TK R+ +P +L + L + FL + Y
Sbjct: 685 QIKDLPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAEYT 744
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E + LA DC+ +LA S N N+VRP FV+ + + + R+P+++++ + ++V
Sbjct: 745 ELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAK--NARNPIIESLDV-HYV 801
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA L + + + TR
Sbjct: 802 PNDIMMSPENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTR 861
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA D I G STF E+ + +IL+NC +SL+++DE+GRGT THDG+AI+YA + Y
Sbjct: 862 IGAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFS 921
Query: 902 EHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E C ++LF TH+P + +IK+ + YH+ Y+ K + V +LYK+
Sbjct: 922 ELSDCPLILFTTHFPMLGEIKSPL---IRNYHMDYVEEQKT-----GEDWMSVIFLYKLK 973
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G++ +S+G VA+LA+L I+RA I+ +L E
Sbjct: 974 KGLTYNSYGMNVAKLARLDKDIINRAFSISEELRKE 1009
>gi|254582410|ref|XP_002497190.1| ZYRO0D17490p [Zygosaccharomyces rouxii]
gi|186703828|emb|CAQ43516.1| MutS protein homolog 3 [Zygosaccharomyces rouxii]
gi|238940082|emb|CAR28257.1| ZYRO0D17490p [Zygosaccharomyces rouxii]
Length = 1006
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 285/977 (29%), Positives = 469/977 (48%), Gaps = 145/977 (14%)
Query: 65 KPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAE 124
KPK + P SS K TPL+QQV ELK K D LL++ VGYK++ F +DA
Sbjct: 106 KPKKKKTAASRSPKTSS------KLTPLDQQVKELKLKNFDKLLVVRVGYKYKCFAQDAV 159
Query: 125 MAAKVLGIY-------------AHLDHN-FMTASIPTFRLNVHVRRLVNAGFKVGVVKQT 170
+A+++L I L H F S P R+NVH+ RLV KVG+V+Q
Sbjct: 160 VASRILHIKLVPGKLTLDDSDPQDLQHKQFAYCSFPDSRINVHLVRLVTRNLKVGIVEQV 219
Query: 171 ETAAIKAHGPG--KAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCV---VDD 225
ET+A+K + K+ F R ++ +KAT V + G+++ + + D
Sbjct: 220 ETSALKKYSADSLKSTVFERKVTTTVSKATYGINNTVESDKKRILGDTSSIWALDVECHD 279
Query: 226 DGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND-GFLRSGLEAVLLSLSPAELL 284
DG +V+V+++ G+V++ EF + S LE + L P EL+
Sbjct: 280 DGTY--------------HYWLVSVDLNNGEVIHDEFEEQKHSTSQLELRMKYLEPVELI 325
Query: 285 LGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQ 344
+ L K+L + D+L + +
Sbjct: 326 TYRNLPDAVTKVL---------------------------------QRANNDSLRIEDRK 352
Query: 345 NMDVPEQGNHRSAIEGI---MNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSM 401
+P+ +EG+ +N+P + ++ L+ + E ++ + ++++ S
Sbjct: 353 ETVLPQ-------LEGLKQHLNLPAETFKLISALFGCLEDYKNEELLLIASNYKPFSSKA 405
Query: 402 EMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISAR 461
M L++N L+ L++ +NGS G+L +++HT T +G R LR W++ PL +R I R
Sbjct: 406 HMLLNSNALESLDIF---TNGSGKGSLFWVLDHTRTAFGYRQLREWISKPLLNRTDIEDR 462
Query: 462 LDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITR 521
LDAV + E + F+ L+ +L + +PD+ R + R
Sbjct: 463 LDAVECVKEEINKL----------------------FFESLNQLLKN---TPDLLRTLNR 497
Query: 522 I-FHRTATPSEFIAVMQAILYAGK-QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSP 579
I + RT+ + + Q L+ G ++I+ E R + S LL L +
Sbjct: 498 IAYGRTSRKEVYFFLKQLSLFGGHFSAHSVYINSEIRSSNGALYHRSKLLATLFQEMADF 557
Query: 580 AVIGKAAKLLSTVNKEAADQGDL----LNLMIISNGQFSEVARAR-KAVQSAKEELDSLI 634
L+S +N A + D+ ++N SEV R + + + ++EL +
Sbjct: 558 LDNSPMPYLMSMINVSAVMEKDMEKHVTGFFNLNNYDNSEVIIQRQREIGAVQDELTEEL 617
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALD 692
+ +K LG L++ + +LIE+ + +P +W KVN+TK R+H+P + ++
Sbjct: 618 HRVQKMLGRPYLKYKD--EVEYLIEVRNSQLKNLPPDWVKVNNTKMVSRFHTPITIKLVE 675
Query: 693 QLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPV 752
+L + L A + FL++ Y + ++ + D L ALA S N N+VRP+
Sbjct: 676 RLQYHKDMLYNEAEAEYRRFLQKITKEYQPLKKFIRNIGNYDSLLALAATSCNANYVRPI 735
Query: 753 FVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQV 812
F D+ + I+ + R+PV++++ + N+V ND + + IITGPNMGGKS Y+RQV
Sbjct: 736 FTDEKQC--INAVNARNPVIESLDV-NYVSNDIKMSEKDGKVLIITGPNMGGKSSYVRQV 792
Query: 813 ALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQ 872
A + ++AQ+GSFVPA EL + D I+TR+GA D++ +G STF EL E I++N T+
Sbjct: 793 AFLVLLAQIGSFVPADHLELSIFDNIFTRIGAYDNLLRGESTFKVELLEVMQIIKNSTSN 852
Query: 873 SLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC-MVLFVTHY-----PKIADIKTKFTG 926
SL+++DE+GRGTST DG AIA+ L Y L C +LF THY P A ++
Sbjct: 853 SLLLLDEVGRGTSTEDGKAIAFTVLQYFLTMNGCPFILFTTHYSMSGLPNPAILR----- 907
Query: 927 SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRA 986
YH+ ++ K S V +LYK+ G + +S+G VA+LA L I+RA
Sbjct: 908 ---HYHMDFVEERKPGENWPS-----VVFLYKLKEGFAHNSYGLNVARLANLDRDIINRA 959
Query: 987 TVIAAKLEAEVSSRVQN 1003
I+ + A+ R+QN
Sbjct: 960 YEISEHMRADY-ERIQN 975
>gi|365990017|ref|XP_003671838.1| hypothetical protein NDAI_0I00260 [Naumovozyma dairenensis CBS 421]
gi|343770612|emb|CCD26595.1| hypothetical protein NDAI_0I00260 [Naumovozyma dairenensis CBS 421]
Length = 1056
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 277/977 (28%), Positives = 478/977 (48%), Gaps = 147/977 (15%)
Query: 59 PPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRF 118
P + PKKPK + K TPL+QQV ELK K D +L+I VGYK++
Sbjct: 152 PERIPKKPK-----------------NQDKLTPLDQQVKELKLKNKDKILIIRVGYKYKC 194
Query: 119 FGEDAEMAAKVLGIY------------AHLDH--NFMTASIPTFRLNVHVRRLVNAGFKV 164
F EDA + + +L I H D F S P RLNVH+ RL+ KV
Sbjct: 195 FAEDAVIVSNILHIKLVPGKLTIRNSNPHDDQYKQFAYCSFPDTRLNVHLERLIFNNLKV 254
Query: 165 GVVKQTETAAIKAHGP--GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCV 222
VV+QTET AIK + P K F R + ++KAT + + G++ + +
Sbjct: 255 AVVEQTETIAIKKNDPTANKTQVFQREIKNTFSKATFGINDQFAKKDKRILGDTKSIWGL 314
Query: 223 VDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLS---LS 279
D + + N + + +++ ++ G+++Y F D LE + L L
Sbjct: 315 ---DFKIDERENSI-------QYYIISANLNNGEIIYNTFTDEL--KALENLKLRIKHLE 362
Query: 280 PAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLS 339
P E++ + L +L+ P+ C + + +
Sbjct: 363 PIEIISPKKLPNH----ILSLFKPSR----------CLV------------------SYT 390
Query: 340 NNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR---HLKQFGLERIMCLGASFRS 396
+NE ++ + I M D A + L + +LKQ+G E+++ + ++++
Sbjct: 391 DNEHHC-----DNERKTTLNEIGEMLDFAKELKDLLVHFFIYLKQYGNEKLLLIRSNYKP 445
Query: 397 LSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRN 456
S +TLS +T++ L+++ N NG G+L+ +++HT T +G + LR W+ HP D
Sbjct: 446 FSIDKCITLSHSTIESLDIITEN-NGK--GSLMWLLDHTRTSFGLQKLREWILHPSTDSL 502
Query: 457 LISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQ 516
+I RLDA+ I +G+ V F+ + +L + +P++
Sbjct: 503 IIEERLDAIECI------------IGE----------VNTIFFESFNQILKT---TPNLL 537
Query: 517 RGITRIFHRTATPSE---FIAVMQAI--LYAGKQLQQLHIDGEYREKVTSKTLHSALLKR 571
R + RI + T + E F+ M AI L+ ++D + E + S LL +
Sbjct: 538 RTLNRIAYGTTSRKEIYYFLKNMCAINELFIN---HSNYLDKQVYESDGNIASKSTLLTK 594
Query: 572 LILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI----ISN-GQFSEVARARKAVQSA 626
+I S + + LL+ +N A + ++ +I ++N SE+ R ++ ++S
Sbjct: 595 IITDISEFSKQEQIPDLLAMINISAVMEKNMEKQVIGFFNLNNYDHASEILRIQQDIESV 654
Query: 627 KEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHS 684
K +L+ + RK L L++ I + IE+ +P +W K+N+T + R+++
Sbjct: 655 KYKLNDELKKIRKLLKRPYLDYKD--EINYFIEVKNTDVKNIPDSWIKMNNTLRVSRFNT 712
Query: 685 PEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR 744
PE +++L + L C + F+ Y+ + + +A DC+ +L+ +S
Sbjct: 713 PETKQLVEKLQYHKDLLVQECEKQYTVFICRLTNEYSILKNVIDNIATYDCILSLSAVSC 772
Query: 745 NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGG 804
N + RP F D ++ + R+P+++++ + N+V ND +++ E II+GPNMGG
Sbjct: 773 NMGYTRPKFTDKKRFIKAK--NSRNPIIESLNI-NYVSNDISMNEEDGIVHIISGPNMGG 829
Query: 805 KSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASY 864
KS YIRQVAL+ I+AQ+GS+VPA E+ + D + TR+GA D+I +G STF E+ E
Sbjct: 830 KSSYIRQVALLVILAQIGSYVPADYMEMSIFDQVLTRIGAHDNILRGDSTFKVEMLEVLE 889
Query: 865 ILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTK 923
I++ T SL+++DE+GRGT T DG AI+Y+ L+Y L C ++LF TH+P++ DI +K
Sbjct: 890 IVKKSTDNSLLLLDEVGRGTGTQDGKAISYSLLEYFLHDSSCPLILFTTHFPEMGDITSK 949
Query: 924 FTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCI 983
F + YH+ Y+ ++ S V +LYK+ PG + +S+G VA+LA + I
Sbjct: 950 F---LKCYHMDYVEENRPGEKWPS-----VIFLYKLKPGFTNNSYGLNVAKLANIDTDII 1001
Query: 984 SRATVIA--AKLEAEVS 998
+ A ++ +K E+E S
Sbjct: 1002 NAAYELSENSKKESENS 1018
>gi|241952074|ref|XP_002418759.1| MutS protein homolog, putative; mismatch-binding protein, putative
[Candida dubliniensis CD36]
gi|223642098|emb|CAX44064.1| MutS protein homolog, putative [Candida dubliniensis CD36]
Length = 990
Score = 369 bits (948), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 285/1039 (27%), Positives = 497/1039 (47%), Gaps = 112/1039 (10%)
Query: 1 MGKQKQQ-VISRFFA---PKSNQT--TASSSASSPRPPQQTPPPKIAATVSFSPAKRKVV 54
M QK+Q +SRFF P S T T++++ P P PP + + F + +
Sbjct: 1 MSSQKRQSTLSRFFTTVKPTSQNTESTSTNNVPPPPSPPPQPPTRNEKLLEFGFNRIESS 60
Query: 55 SSLFPPKTPKK-PKLSPHTLNPIPTPS-SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEV 112
S+ P PK K TLN P +T K+ TPLE+Q++EL ++ D +L+I++
Sbjct: 61 STTNPTTKPKDIKKRKSTTLNVSSEPRIKKTMKEKRLTPLEKQILELTEQHQDKILLIQI 120
Query: 113 GYKFRFFGEDAEMAAKVLGIYAHL----DHNFMTASIPTFRLNVHVRRLVNAGFKVGVVK 168
GYK++ FG +A +++L I D F SIP RL++H++R++N G+KVG+VK
Sbjct: 121 GYKYKVFGINALKVSQILNIMYITNDIEDSRFHYCSIPDTRLHIHLQRILNHGYKVGIVK 180
Query: 169 QTETAAIKA--HGPGKAGPFGRGLSALYTKATLEAAEDVGGGE------DGCGGESNYLV 220
Q E++ IK + R L+ +YTKAT E +G D Y++
Sbjct: 181 QIESSIIKQIEKTSKSSDVMRRELTRVYTKATYFGDELIGTNNKEEINWDLFSKLPEYII 240
Query: 221 CVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSP 280
C+ + D VA++ G++++ F D R LE LL L P
Sbjct: 241 CI---------------NEISDKEFAFVAIQPLIGEIIFDCFKDDISRQELETRLLYLRP 285
Query: 281 AELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSN 340
E+++ +N + S + + ++ MG+
Sbjct: 286 IEVIV------------------ITNEITKEISSPTLMTLKLINHNANIIHKMGQ----- 322
Query: 341 NEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSG 399
N ++ + ++ +E +N P Q + +L +F L I + + S
Sbjct: 323 ---CNYEISDYLSNEQLVEYYSINFPLKIQQCFQYLLTYLHEFKLTNIFTIPENITSFQN 379
Query: 400 SME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLI 458
S + M L ANTL LE+ N+++ + G+L +++N+T TI+GSRLL++WV+ PL I
Sbjct: 380 SKKYMILPANTLNSLEIFINSTDHTTKGSLFNLLNNTKTIFGSRLLQKWVSRPLVHIQDI 439
Query: 459 SARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRG 518
R A+ ++ +S+ N + I +Y L +L+ + S G
Sbjct: 440 KDRHQAIDDLQSEYN--HVVDSIC-----NFLIKIK----HYDLEGLLSKIHYSSSNDHG 488
Query: 519 ITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRL---ILT 575
R + ++ +Q IL K+ + + + S S+LL ++ +L+
Sbjct: 489 SNRASRKQVYL--LLSYLQEILLLVKK---------FDKSIKSLKFKSSLLIKIFNELLS 537
Query: 576 ASSPAVIGKAAKLLSTVN------KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEE 629
+ +I LS ++ KE+++Q F + + +
Sbjct: 538 IAQTDII--IENFLSMIDLSFFDCKESSEQCQ----KFFKRNNFQSIEIQYNKISQYETL 591
Query: 630 LDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPL-NWAKVNSTKKTIRYHSPE 686
++ +++ RK+L L+++ G +LIE+ N K+P+ N+ + ST+ RY +
Sbjct: 592 IEQELDIIRKELNNPKLKYVQKDGERYLIEIRNNQRDKIPIENYLLIKSTQTITRYRNKS 651
Query: 687 VLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNK 746
V L L E L C + +FL +Y F ++ L+ DCL +L T S
Sbjct: 652 VTKYLKLLQYHEEMLIKTCDEEFQNFLINLDSHYQLFYKIIKNLSIFDCLISLTTTSSLT 711
Query: 747 NFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKS 806
N+ RP+ V+D + I + R+P+++ + N+V ND N+ ++ IITGPNMGGKS
Sbjct: 712 NYTRPIIVED---LIIDVKKARNPIIEQ-MRPNYVSNDINIEYDKNRVLIITGPNMGGKS 767
Query: 807 CYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYIL 866
Y++ VAL+ +M Q+G ++P A + + D I+ RMGA+D+I +G STF+ E+ + I+
Sbjct: 768 SYVKTVALLTVMTQIGCYLPCDKAIMGIFDSIFIRMGANDNILKGYSTFMMEMLQCKNII 827
Query: 867 RNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVTHYPKIADIKTKFT 925
T +SL+I+DE+GRGT T DG+A+AY+ L YL+E + K ++LF+THYP I ++ ++
Sbjct: 828 SMMTTRSLIILDEIGRGTGTIDGIALAYSILKYLIESEFKPLILFITHYPSIHVLEKEYP 887
Query: 926 GSVGTYHVSYLTSHKVMGPMDSKSDQ----DVTYLYKVVPGVSESSFGFKVAQLAQLPPS 981
V YH+ Y + + Q ++ +LY + GV +S+G VA+LA +
Sbjct: 888 YQVINYHMGYQEIQQQNQNQNQNQKQIEIPEIIFLYNLCHGVVNNSYGLNVAKLAGISHD 947
Query: 982 CISRATVIAAKLEAEVSSR 1000
I +A I+ +++ ++ +
Sbjct: 948 IIFQAFNISEQMKLDIEMK 966
>gi|410083765|ref|XP_003959460.1| hypothetical protein KAFR_0J02610 [Kazachstania africana CBS 2517]
gi|372466051|emb|CCF60325.1| hypothetical protein KAFR_0J02610 [Kazachstania africana CBS 2517]
Length = 1018
Score = 369 bits (946), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 275/950 (28%), Positives = 463/950 (48%), Gaps = 129/950 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL------GIYAHLDHN---- 139
TPL+QQV ELK + LL+I VGYK++ F +DA +A+K L G + N
Sbjct: 133 TPLDQQVKELKQNNNNKLLVIRVGYKYKCFAQDAIVASKALHLKLVPGKLTFDESNPQDA 192
Query: 140 ----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
+ S P RLNVH+ RL++ KVGVV+Q ET AIK K F R ++ ++
Sbjct: 193 QFKQYAYCSFPDTRLNVHLERLIHHNLKVGVVEQQETGAIKKQTNNKTNVFERKVTNTFS 252
Query: 196 KAT--LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
KAT + + + G++ + + I G G + +++V ++
Sbjct: 253 KATYGINTPYSINNDKSAVLGDTKSIWAL--------SIVAGEKGTTY----HLLSVNLN 300
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G+V++ FND SL+ + L + + Y P V +
Sbjct: 301 SGEVIHDTFND------------SLNSTDELFTR----------VKYLDPFE-VTSLNSK 337
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA 373
D + +++L++ ++ S N N PE ++++ ++ L+ +
Sbjct: 338 NDIHVN------ILNLFK---QENCSLNCTGNSPKPE-----ASLDSVVRTLKLSSEMTT 383
Query: 374 LT---IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L +L + E+I+ + +++++ + MTL + L+ L++ SN + G+L+
Sbjct: 384 LVHLLYNYLMDYNNEKILEISSNYKTFGSKVHMTLDGHALESLDIF---SNDGKKGSLVW 440
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+M+HT T +G R LR+W++ PL ++ I ARLDAV I++ +
Sbjct: 441 LMDHTRTPFGFRQLRQWISKPLVQQDEIDARLDAVDCISKEVSGI--------------- 485
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE---FIAVMQAILYAGKQLQ 547
F+ L+ +L + +PD+ R + RI + + E F+ + + K+
Sbjct: 486 -------FFEALNQMLKT---TPDLMRTLNRIAYGNTSRKEVYFFLKQINGFIDHFKKHS 535
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD------ 601
I+ E S +L+ + + +LLS +N A D
Sbjct: 536 N-QINNEICSVNGKIYAQSRILREIFTQIRDIFQSTEIPRLLSMINVIAVMDKDQVTQAV 594
Query: 602 -LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL 660
NL N + ++ ++ ++ K +L + ++ L +LE+ + +L+E+
Sbjct: 595 GFFNLNNYDNSE--DIIAIQRDIEGVKRDLMDELKNIKRILKRPHLEYRDT--VEYLVEV 650
Query: 661 PANFKV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
N +V P +W KVN+TK R+ +P ++L E L C ++ FL +
Sbjct: 651 -RNTQVKGLPDDWIKVNNTKAVSRFSTPVTAKLTEKLQYHKELLMQKCNDEYERFLGKVN 709
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y + +Q LA+ DC+ +LA S N N+VRP FV D + + +GR+P+++++ +
Sbjct: 710 KEYPSLKVVIQNLASYDCILSLAATSCNVNYVRPKFVTDAVAQTVAVKNGRNPIIESLNV 769
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
++VPND N+ IITGPNMGGKS YIRQVAL+ IM+Q+GS+VPA E + D
Sbjct: 770 -HYVPNDVNIKQSDNKINIITGPNMGGKSSYIRQVALLIIMSQIGSYVPADHMETSIFDK 828
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I TR+GA D + +G STF E+ E ILR CT +SL+++DE+GRGT T DG AI+YA L
Sbjct: 829 ILTRIGAHDDLLRGDSTFKVEMMEILNILRTCTPKSLLLLDEVGRGTGTLDGRAISYALL 888
Query: 898 DYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
Y +E + C ++LF TH+ K+++ S+ + H+ V D ++ V +L
Sbjct: 889 KYFVELENCPLILFTTHFSKLSE-------SLASKHIKNFYMDYVEEKNDGENWSSVIFL 941
Query: 957 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAK-----LEAEVSSRV 1001
Y ++PG S SFG VA+LA L I+RA I+ K LEAE + ++
Sbjct: 942 YNLIPGSSNDSFGLNVAKLANLDKDIINRAYEISEKTKQEELEAEATLKL 991
>gi|380487284|emb|CCF38138.1| DNA mismatch repair protein MSH3 [Colletotrichum higginsianum]
Length = 735
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 243/751 (32%), Positives = 392/751 (52%), Gaps = 63/751 (8%)
Query: 267 LRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-----RVECASRDCFIGGG 321
+RS +E LL +SP E ++ L+K ++K++ +G ++NV RVE R +
Sbjct: 1 MRSEIETRLLHISPCEFVIVGDLTKGSDKLVQHLSGSSTNVFGDRSRVERVPRSKSMAAE 60
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
A + V Y D L D S +E I+++P+ L+ I HL++
Sbjct: 61 AYSHVTQFYA----DKLQQTPDAAAS--------SLLERILHLPEPVTICLSAMINHLQE 108
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+GLE + L +F S S M L+ TL+ LEV RN ++ S+ G+L ++ T T +G
Sbjct: 109 YGLEHVFDLTKNFTSFSARQHMLLNGTTLESLEVYRNATDHSDRGSLFWALDKTTTRFGQ 168
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLR+WV PL D + + AR+ AV E+ S +
Sbjct: 169 RLLRKWVGRPLLDVSRLEARVAAVQELVNEQSSAKVDR---------------------- 206
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L ++LT G D++R + RI++ T E ++V+Q LQ++ + + +
Sbjct: 207 LETLLT--GIKTDLERSLIRIYYGKCTRPELLSVLQT-------LQRIAMQYSTVKSADA 257
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
S L+ IL S P ++ L +N EAA + D N S Q ++ +
Sbjct: 258 TGFASPLISSAIL--SLPQILDLVVSHLEKINPEAARKDDKYNFFRESE-QTEDIEDHKM 314
Query: 622 AVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELP-ANFK-VPLNWAKVNSTKK 678
+ + ++ LD + L + +++++VSGI +LIE+ + K VP +W K++ TKK
Sbjct: 315 GIVAVEQSLDEHRSEAASSLSRKKPVDYVTVSGIEYLIEVNNTDLKAVPASWIKISGTKK 374
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
R+H+P V+ + + E L C AA+ S L Y + AV +LAALDCL +
Sbjct: 375 LSRFHTPAVVRLIAERDQHREALAAACDAAFASLLAAIADAYQPLRDAVSSLAALDCLLS 434
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIIT 798
L+ ++ + +P F+ I I GRHP+ + L D ++P T L + ++T
Sbjct: 435 LSRVAALPGYTKPTFLSAPTQPTISITQGRHPIAEHTLSDPYIPFTTTLSSPSPLAHLVT 494
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNMGGKS ++R VAL+ ++AQ+GSFVPA L + D I+ RMGA D++ G STF+ E
Sbjct: 495 GPNMGGKSSFVRAVALLVLLAQIGSFVPADEFSLTLADAIHVRMGARDNLAAGESTFMVE 554
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA 918
++E + ILR T +SLVI+DELGRGTSTHDG AIA+A LD+++ +C+ LF+THY +A
Sbjct: 555 VSETARILRAATPRSLVILDELGRGTSTHDGAAIAHAVLDHVVRENRCLTLFITHYQNLA 614
Query: 919 DIKTKF-TGSVGTYHVSYLTSHKV--------MGPMDSKSDQDVTYLYKVVPGVSESSFG 969
+ G V H+ + + K+ G D+ +++++T+LY+V GV+ S+G
Sbjct: 615 RLADGIGDGLVKNVHMRFTATRKLEAEGGDGEEGVDDAGANEEITFLYEVGEGVAHRSYG 674
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
VA+LA++P I A + ++E +V R
Sbjct: 675 LNVARLARIPRKVIEVAAQKSREMEQDVRVR 705
>gi|444320860|ref|XP_004181086.1| hypothetical protein TBLA_0F00230 [Tetrapisispora blattae CBS 6284]
gi|387514130|emb|CCH61567.1| hypothetical protein TBLA_0F00230 [Tetrapisispora blattae CBS 6284]
Length = 1088
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 276/949 (29%), Positives = 472/949 (49%), Gaps = 127/949 (13%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA----- 134
+++ T K TPL+QQV +LK D +L+I VGYK++ F EDA + +L I
Sbjct: 193 TAKLTATSKLTPLDQQVKDLKINNMDKVLVIRVGYKYKCFAEDAVKVSNILHIMLVPGKL 252
Query: 135 HLDHN---------FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK--AHGPGKA 183
+D + + S P RLNVH+ RLV KVGVV+Q ET AIK + K+
Sbjct: 253 TIDESNPKDSEHKQYAYCSFPDTRLNVHLERLVRNNLKVGVVEQFETTAIKKLSSTSNKS 312
Query: 184 GPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDV 243
F R ++ Y+KAT G N + C+ ++ I N +
Sbjct: 313 SVFERRIANTYSKATFGINTPFKCEGKHVIGNLNSIWCI-----SIENISNTLNN----- 362
Query: 244 RLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGP 303
+ +V +++G+++Y F + +P +LL + Y P
Sbjct: 363 -YKLFSVNLNSGEIIYDTFEE-----------FPKNPQQLLTR-----------IKYLQP 399
Query: 304 ASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQ-NMDVPEQGNHRSAIEGIM 362
+ ++ G+L + L+E ++ +ED+ N +P + +E +
Sbjct: 400 VEIITLK----------GSLD--IKLFEKDTITIINKSEDEYNSIIPNEKLDTFLVENKI 447
Query: 363 NMPDLAVQALALTI--RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNS 420
+ ++ L +L+Q+ + I+ + +++S + M LS+ T+ L++ NN
Sbjct: 448 EEKTIENSSVILQFLYDYLQQYNNQDILLIKDNYKSFVSTQHMLLSSKTIDTLDIFSNN- 506
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
GS+ G+L I++HT T +GSR L W++ PL + I+ RLDAV E M +
Sbjct: 507 -GSK-GSLYWILDHTRTPFGSRTLLDWISRPLLNAEEINDRLDAV----ECMKN------ 554
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
I+ F+ + ++L + PD+ R + RI + + + E ++
Sbjct: 555 ------------IISQHFFESIGNLLKGM---PDLLRALNRIAYGSISKKELYFFLKQ-F 598
Query: 541 YAGKQLQQLHIDGEYREKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVN------ 593
++L LH D RE ++S ++ S +++ + ++ + + LLS +N
Sbjct: 599 NMLEELLDLHSDFIEREILSSTNSIKSDMIRNIFISINLRIKETSISNLLSMINVSSVLD 658
Query: 594 KEAADQG-DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
K Q + NL N ++ + ++ ++ K ELD + + RKQL +L +
Sbjct: 659 KSVEKQTLEFFNLNNYDNPD--KIIQRQRDIEGIKSELDEELKIIRKQLKRPHLNYKDEK 716
Query: 653 GITHLIELPANFKV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW 709
+LIE+ N +V P +W K++STK R+ +P V L++L + L + C +
Sbjct: 717 D--YLIEV-RNSQVKGLPSDWIKISSTKMVGRFQTPNVTKLLERLQYQKDMLQLDCEQEY 773
Query: 710 DSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHIC--SG 767
F+ Y + + L DC+ ALA +S N N+ RP+ D ++ HI +
Sbjct: 774 SRFVDIINKKYPLLRDIINNLGVYDCILALAAVSCNVNYTRPIINDKYQ----HIIGKNS 829
Query: 768 RHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPA 827
R+P+++++ + +VPND N+ + IITGPNMGGKS YIRQVAL+ I+AQVGS+VPA
Sbjct: 830 RNPIVESLDI-KYVPNDINITSTNA-INIITGPNMGGKSTYIRQVALLVILAQVGSYVPA 887
Query: 828 SSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTH 887
EL + D I TR+GA D + +G STF+ ELNE IL +++SL+++DE+GRGTST
Sbjct: 888 DFLELSIFDNISTRIGAYDDLIRGESTFMIELNEIKEILDTYSSKSLLLLDEVGRGTSTI 947
Query: 888 DGVAIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMD 946
DG AI+ + + Y +E + C ++ F THYP + DI + ++ Y + Y+ M P
Sbjct: 948 DGKAISSSLIKYFIETQDCPLIFFTTHYP-VQDIS---SSTIKNYFMDYIEE---MKP-- 998
Query: 947 SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
++ + +T+LYK+ G+SE SFG VA+LAQ+ +++A ++ ++
Sbjct: 999 GETWRSITFLYKLKNGISEGSFGLNVAKLAQINEKILTKAQELSVSMKT 1047
>gi|241340740|ref|XP_002408552.1| mutS family protein. putative [Ixodes scapularis]
gi|215497364|gb|EEC06858.1| mutS family protein. putative [Ixodes scapularis]
Length = 659
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 230/693 (33%), Positives = 356/693 (51%), Gaps = 79/693 (11%)
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA-SNV 307
AV+ +TG+V+Y F + LE L SL P E++L + S + + +Y + V
Sbjct: 20 AVQPTTGEVLYDSFQESSGGGELEQRLESLQPVEVVLSEKSSPTVLRTVASYQSLSREGV 79
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL 367
RVE S F +L + Y G ++ + + +M +P +
Sbjct: 80 RVEHLSPSQFDLSASLDALTKFYRRDGVES-----------------KGELATLMALPPV 122
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYG 426
V + + +L F LE ++ + F +++G M ++ TL++L++ RN+ +G+ G
Sbjct: 123 VVCCIGSLLGYLATFKLEEVLRDVSRFTAMAGECRRMAFTSATLRRLDLFRNSLDGTSRG 182
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+LL +M+HT T +G RLL W+ PL D +I R DAV +I S +
Sbjct: 183 SLLDVMDHTATAFGRRLLFSWLGQPLADLGVIIERQDAVEDILSSGST------------ 230
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
S + L R PD+QRG+ I H+ PS+ ++ ++
Sbjct: 231 --------------AFSDLRKFLSRMPDVQRGLCAILHKKVKPSDAFEILTSL------- 269
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
+ + L S+L L L G L ++ +AA ++ L
Sbjct: 270 ------------ASVRDLFSSLQNDLTL--------GTLDVTLRCLDAQAARSNNMAGL- 308
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--F 664
+ ++ + ++ V + +E+L +L QLG+ ++ +VSG+ +LIE+P
Sbjct: 309 FTDLSHWPDLMQRKQDVINTEEKLVALKKTIAGQLGLLTFDYKTVSGMPYLIEVPTRRLS 368
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP NW K++STK R+ SP V + +L + E + + R W++FL E Y +Q
Sbjct: 369 SVPSNWLKISSTKTAERFRSPAVDSLYKELCVGQELVLVESRKTWNAFLGEVSQGYNNYQ 428
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD--TILLDNFVP 782
AV+A+A +DC +LA + + RP + V I GRHP+L+ +V
Sbjct: 429 RAVRAIATVDCFLSLARTASQYGYCRPQMLPKEHRV-FRITKGRHPILEQRVTATSQYVC 487
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
NDT+L +E C +ITGPNMGGKS Y+RQVALI IMA VGS VPA +A + +LDG+Y RM
Sbjct: 488 NDTDL-SEDLRCCVITGPNMGGKSSYMRQVALIAIMAHVGSHVPAEAATISLLDGVYVRM 546
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GA D + GRSTFL E+ E S IL CT SLV++DELGRGT+THDG AIA ATL +L+E
Sbjct: 547 GAEDDVTLGRSTFLCEMQETSEILDKCTTHSLVVIDELGRGTATHDGTAIALATLRHLVE 606
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSY 935
K+C+ LFVTHY I +++T + G+V HV++
Sbjct: 607 EKQCLTLFVTHYQPITEMETFYKGAVTNCHVAF 639
>gi|114599390|ref|XP_526872.2| PREDICTED: DNA mismatch repair protein Msh3, partial [Pan
troglodytes]
Length = 653
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 205/560 (36%), Positives = 318/560 (56%), Gaps = 50/560 (8%)
Query: 450 HPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSL 509
H C R I+ARLDAVSE+ S S + + L
Sbjct: 98 HLRCSRWEINARLDAVSEVLHSESS--------------------------VFGQIENHL 131
Query: 510 GRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH--SA 567
+ PDI+RG+ I+H+ + EF +++ + H+ E++ + + H S
Sbjct: 132 RKLPDIERGLCSIYHKKCSTQEFFLIVKTLY---------HLKSEFQAIIPAVNSHIQSD 182
Query: 568 LLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAK 627
LL+ +IL P ++ L +N++AA GD L F + + + +Q
Sbjct: 183 LLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQGVI 239
Query: 628 EELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSP 685
+E+ + RK L + ++++VSG +IE+ A +P +W KV STK R+HSP
Sbjct: 240 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 299
Query: 686 EVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN 745
++ L E+L + C A W FL++F +Y AV LA +DC+ +LA +++
Sbjct: 300 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAKQ 359
Query: 746 KNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGPNMG 803
++ RP E +I I +GRHPV+D +L D +VPN+T+L + E IITGPNMG
Sbjct: 360 GDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGPNMG 416
Query: 804 GKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEAS 863
GKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +GRSTF+EEL + +
Sbjct: 417 GKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEELTDTA 476
Query: 864 YILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTK 923
I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LFVTHYP + +++
Sbjct: 477 EIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKN 536
Query: 924 FTGSVGTYHVSYLTS--HKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQLPP 980
++ VG YH+ +L S + P ++ D VT+LY++ G++ S+G VA+LA +P
Sbjct: 537 YSHQVGNYHMGFLVSEDESKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPG 596
Query: 981 SCISRATVIAAKLEAEVSSR 1000
+ +A + +LE ++++
Sbjct: 597 EILKKAAHKSKELEGLINTK 616
>gi|255725426|ref|XP_002547642.1| hypothetical protein CTRG_01949 [Candida tropicalis MYA-3404]
gi|240135533|gb|EER35087.1| hypothetical protein CTRG_01949 [Candida tropicalis MYA-3404]
Length = 1015
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 294/1018 (28%), Positives = 489/1018 (48%), Gaps = 123/1018 (12%)
Query: 6 QQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKT--- 62
Q ISRFF PK T S+ S + S S K+ +F P++
Sbjct: 65 QSKISRFFTPKKRATEDESNTKSV-----------TSPTSSSTCSSKLAEFIFDPESTSE 113
Query: 63 ---PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFF 119
P + + I P S+ + T +E Q+++L ++ D +L+I+ GYK+R +
Sbjct: 114 DCVPSSKQKKRKSKGIISAPESKKV-KPQLTAMESQILDLLSENSDKILLIQNGYKYRAY 172
Query: 120 GEDAEMAAKVLG---IYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK 176
GE A +L I D F S P L+ H++RL+N G +G+VKQ E+AA+K
Sbjct: 173 GEGGRTVANILNMCFIEDKKDSRFGRCSFPEVNLHKHLQRLLNHGLTIGIVKQLESAALK 232
Query: 177 AHGPGK--AGPFGRGLSALYTKATLEAAEDV--GGGEDGCGGESNYLVCVVDDDGNVGKI 232
K + RGL+A+YTK+T E V ED G Y++C+
Sbjct: 233 EFDETKKSSSIMERGLTAVYTKSTYFGDECVKDSTSEDYFDG-GKYIICL---------- 281
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELL-LGQPLSK 291
N + F +VAV STG+++Y +F D R LE LL L P E++ + + +
Sbjct: 282 -NEISTKEF----ALVAVRPSTGEIIYDQFMDSGFRYELETRLLYLPPDEVIVISKSENI 336
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQ 351
T K+L + RV N+ EDTL E
Sbjct: 337 STMKILKSIDDNLKTTRV----------------------NIPEDTL-----------ES 363
Query: 352 GNH---RSAIEGIMNMPDLAVQALALTI-RHLKQFGLERIMCLGASFRSLSGSME-MTLS 406
H A+E L +Q +++ +L + + ++ + + + S + M +
Sbjct: 364 WKHILGDDALELYSVNYSLPLQQCFVSLLEYLSRLNVANMLSIHDNVTLFNDSKKHMVIP 423
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
A ++ LE+ N + S G+L++I++ T T +G RL ++W++HPL + I R +A++
Sbjct: 424 AEAIKSLELFTNTTTNSSIGSLVNILDRTRTRFGYRLFQKWISHPLIEIKAIEERHEAIN 483
Query: 467 EIAESMGSYRTSES-VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGIT--RIF 523
++E + + E +G KN+D L S+L L S D G T RI
Sbjct: 484 ALSEHNILFESMERFLGAL--KNND-----------LESMLMKLHYSAD---GTTPNRIN 527
Query: 524 HRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLI-LTASSPAVI 582
+ + AIL L +L ++ + + SK S+++ ++ S I
Sbjct: 528 RKE---------VYAILNHFDDLFKLV--NKFEKTIRSKDFGSSIVNKIFDELLSFTNTI 576
Query: 583 GKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
+ L+ +A D ++ G F + ++ + + +N R +L
Sbjct: 577 EDSLSLIDPSFLDAVDHSQIVQ-RFFKRGSFEAIEEQYAKLKELDIQFEDELNRIRTELN 635
Query: 643 MRNLEFMSVSGITHLIELPANFKVPL--NWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
+L ++SVS HLIE+ + + L N+ K+NST RY S EV+ + +
Sbjct: 636 NPSLRYISVSKEDHLIEVRKSKEKDLSDNYIKINSTNTVGRYRSKEVVKLRKLMKYHEVK 695
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV 760
L C + F+ + Y +V+ LA LD L +L SR+ +V+P V+D +
Sbjct: 696 LFQRCDEEFRRFIADLDVRYVSLMKSVKNLATLDALLSLRDASRDGGYVQPKLVND---L 752
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
I + + R+P+++ L N++ N+ ++ E IITGPNMGGKS Y++ VAL+ IMAQ
Sbjct: 753 SIKVQNARNPIIEN-LRSNYIANNIDID-ENSRVSIITGPNMGGKSSYVKTVALLTIMAQ 810
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
VG F+P A + + D I+ RMGASD I Q +STF+ E+ E I+ N +SLVI+DE+
Sbjct: 811 VGCFLPCDYAVMGIFDSIFIRMGASDDILQNKSTFMVEMLECKNIISNLGDRSLVILDEI 870
Query: 881 GRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
GRGT T DG+++AY+ L YL+E + K ++ F+TH+P I+ ++ + V +H+ Y
Sbjct: 871 GRGTGTTDGISLAYSILKYLIECELKPVLFFITHFPSISVLENEHPQEVANFHMGY---E 927
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEV 997
+V +S+ ++ +LY + GV +S+G VA+LA +P I +A+VI+ KL+A++
Sbjct: 928 EVYNDDESEGIPEIIFLYNLCRGVVNNSYGLNVAKLAGVPKELILKASVISEKLKADI 985
>gi|321450379|gb|EFX62417.1| hypothetical protein DAPPUDRAFT_336969 [Daphnia pulex]
Length = 633
Score = 358 bits (920), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 225/655 (34%), Positives = 351/655 (53%), Gaps = 50/655 (7%)
Query: 358 IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME--MTLSANTLQQLEV 415
++ + ++P + +A+ HLKQF LE+++ + + + + + N ++ L +
Sbjct: 1 MDKLKDIPPVIHCCIAMAHEHLKQFKLEQMVKMINDVKPYEAFDDNVLQMDGNCVRNLNL 60
Query: 416 --LRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMG 473
L N + G++ H++N T T G+RLLR W+ PL R+LI +RL+AV +
Sbjct: 61 VPLTNETGPQLIGSVYHVLNQTRTKPGARLLRSWLLRPLACRDLIESRLEAVGFFVD--- 117
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFI 533
H E +P+ L+ L PD+++ +T + H + P EF
Sbjct: 118 ----------HFE--------DPE----LAPFKKFLKSLPDLEKQLTAVLHSRSKPKEF- 154
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN 593
+ + +QL L ++ + K L ALL + S + A+ LS V
Sbjct: 155 ---HGLCKSWEQLTILCVELQSHYK-NVLPLSVALL--INSAVDSLKMAPFYAEQLSDVA 208
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+ ++ L N + + E+ + +Q + ++ +L K +G+ L +++VSG
Sbjct: 209 ISSGEKTKLFNRL----EDYPEMKMLFEKIQQTESKIQALKPSICKSIGLLALNYVTVSG 264
Query: 654 ITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
+LIE+ VP +W K+++TK+ RY SPEV +L E L I AW
Sbjct: 265 DEYLIEVKNALIRAVPSSWIKISATKQCCRYRSPEVQQLFGELCCLRELLKISADEAWLQ 324
Query: 712 FLKEFGGY-YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
F ++ Y+ F+ A A+A LDCL AL+ +++++N+VRP FVD E +++ GRHP
Sbjct: 325 FQRQVSTTSYSTFRRANNAIATLDCLIALSDVAKSENYVRPTFVD--EAGVLNVSQGRHP 382
Query: 771 VLDTILLDN----FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
VL IL ++PNDT L+ + C IITGPNMGGKSC + QV ++ ++AQ+GSFVP
Sbjct: 383 VLSRILQQTSSAEYIPNDTKLNTDGVRCMIITGPNMGGKSCLLSQVGILVVLAQIGSFVP 442
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
A A L V I+ RMG D I GRSTF E+ E S IL++CT++SLVI+DELGRGT T
Sbjct: 443 AVEASLSVFKSIFIRMGLHDEIYAGRSTFFIEMMETSAILKSCTSRSLVIIDELGRGTGT 502
Query: 887 HDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMD 946
HDG AIAYA L YL++ KC+ LFVTHYP I ++ +F G V YH+ Y+ + +
Sbjct: 503 HDGSAIAYAALKYLVKQTKCITLFVTHYPVIVQLEDEFPGHVANYHMGYILESEKADNVQ 562
Query: 947 SKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ D++ + +LY + PG S SFG VA+LA +P S RA + + E S+
Sbjct: 563 ADCDEEALVFLYTLTPGNSPKSFGLNVARLAGIPSSITDRAKLKSESFFTEAESQ 617
>gi|367004290|ref|XP_003686878.1| hypothetical protein TPHA_0H02400 [Tetrapisispora phaffii CBS 4417]
gi|357525180|emb|CCE64444.1| hypothetical protein TPHA_0H02400 [Tetrapisispora phaffii CBS 4417]
Length = 1061
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 271/948 (28%), Positives = 459/948 (48%), Gaps = 128/948 (13%)
Query: 78 TPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---- 133
T S+ T+ + TPL++Q+ ++K K D +L++ VGYK++ F EDA + +++L I
Sbjct: 148 TKKSKKTNTDQLTPLDKQIKDIKIKNMDKVLIVRVGYKYKCFAEDAIIVSQLLHIMLIPG 207
Query: 134 -------AHLDHN---FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGK- 182
D N F S P RL VH+ LV+ KV +V+QTET+AIK P
Sbjct: 208 KLSIDGSNPQDKNYKQFAYCSFPDIRLKVHLENLVHHNLKVAIVEQTETSAIKKVLPSSK 267
Query: 183 -AGPFGRGLSALYTKATLEAAEDVGGGEDG--CGGESNYLVCVVDDDGNVGKIRNGVFGD 239
+ F R ++ ++TKAT + G ++ + ++ N ++N +
Sbjct: 268 SSSVFERQITGVFTKATFGVNSTFTNLREKFVLGHNNSIWILKLNLVINELNLKNNDLFE 327
Query: 240 GFDVRLGVVAVEISTGDVVYGEFNDGFLR-SGLEAVLLSLSPAELLLGQPLSKQTEKMLL 298
F +++V +++G+VVY F + R E LL L+P E+L + + K L
Sbjct: 328 FF-----LISVNLNSGEVVYDSFTEPINRLEKFETRLLHLNPVEVLTTEEFPELISKKL- 381
Query: 299 AYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAI 358
G ++ +++ D + E +D +GN
Sbjct: 382 ---------------------KGKECSIIKQSKDIPNDIVPTKE---LDEIVKGN----- 412
Query: 359 EGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN 418
+M D+ L +L ++ + I+ L +++ + TL NT+Q L++
Sbjct: 413 ----DMKDVFRSLLYHLYFYLTEYNNQNILKLPTNYKHFLTNSSFTLDKNTIQSLDIF-- 466
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
SN G+L +++HT T +GSR LR WV HPL ++ LI RL+++ +
Sbjct: 467 -SNDCGKGSLFWLLDHTRTAFGSRQLRDWVLHPLTNQVLIEERLNSIEAL---------- 515
Query: 479 ESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA 538
VT +E F+ L+++L + +PDI + I RI + + E
Sbjct: 516 ------------VTEIENIFFDSLNNLLKN---TPDILKTINRISYGITSRKE------- 553
Query: 539 ILYAGKQLQQLHIDGE-YREKVTSKTLH--------SALLKRLILTASSPAVIGKAAKLL 589
+ Y KQ++Q + + + E ++S+ ++ S L L T + + + +LL
Sbjct: 554 VYYFLKQMKQFYDHFQVHNEFLSSEVINENGLINKKSPFLFNLFKTINENLLTSRIPELL 613
Query: 590 STVNKEAADQGD-------LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
+ +N A D NL N + + ++ + S K EL + + L
Sbjct: 614 AMINISAVLDKDPKIQVCEFFNLNNYCNSE--NMTSIQREIGSIKNELQEELQNIKNILK 671
Query: 643 MRNLEFMSVSGITHLIELPANFKV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANE 699
+L F + +LIE+ N +V P +W VN TK RY +P+ ++L NE
Sbjct: 672 RPHLSFKDETE--YLIEV-RNTQVKGIPADWVVVNRTKMISRYQTPKTKLLCEKLQFQNE 728
Query: 700 ELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEP 759
L + + SF+K Y + + D L +L+ S N+VRP F D P
Sbjct: 729 LLYNEANSEYLSFVKCINKEYTKLHQIISNFGVYDALLSLSATSNYTNYVRPKFTD--VP 786
Query: 760 VQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMA 819
I + R+P+++++ L N+VPN+ + + IITGPNMGGKS YIRQVAL+ I++
Sbjct: 787 QYIQASNSRNPIIESLNL-NYVPNNVTISQKEGSFLIITGPNMGGKSSYIRQVALLIILS 845
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q+GSFVPA E+ + D + TR+GA D++ QG+STF EL E +I++N T SL+++DE
Sbjct: 846 QIGSFVPADVLEISIFDNVLTRIGAYDNLLQGQSTFKVELQEILHIIKNSTENSLLLLDE 905
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS 938
+GRGTST DG AI+++ ++Y + C +VLF THY + K + + Y++ +
Sbjct: 906 VGRGTSTKDGQAISWSLINYFVTLPSCPVVLFTTHYSNLT--KNLSSKVIQNYYMDF--- 960
Query: 939 HKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRA 986
V ++ +S V +LYK+ G++++S+G VA+LAQ+ I+ A
Sbjct: 961 --VERKLEGESWTTVVFLYKLKKGLTDNSYGLNVAKLAQIDARIINEA 1006
>gi|326432290|gb|EGD77860.1| hypothetical protein PTSG_12896 [Salpingoeca sp. ATCC 50818]
Length = 1199
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 244/769 (31%), Positives = 387/769 (50%), Gaps = 77/769 (10%)
Query: 13 FAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKKPKLSPHT 72
F P + + +++ +P P IA S AKRKV S P K+ K L H+
Sbjct: 85 FLPSTKRAKTDRASTPSKPAVAGAKPDIAT----SSAKRKVELSPVPEKSAK---LDVHS 137
Query: 73 LNPIPT----------PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
T P + K TPLEQQ +++K K+P+ +L++EVGYK++FFG D
Sbjct: 138 FLRADTHKQRKSATGLPGFEVPKGAKLTPLEQQFLDVKRKHPNSVLLVEVGYKYQFFGRD 197
Query: 123 AEMAAKVLGIYAHLDHN-FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG 181
AE+AA VL I+ HN F ASIP RL VHVRRLV+AG+KVGVVKQTETAA+K
Sbjct: 198 AEIAADVLNIFCASGHNNFKIASIPVHRLFVHVRRLVDAGYKVGVVKQTETAALKKASAN 257
Query: 182 KAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF 241
K+ PF R L+A+YTK TL + G + E+ YL C+ +D I++ G
Sbjct: 258 KSKPFTRKLAAMYTKGTLIGEDVDVGDDAADVNETGYLCCLCED------IKDEA---GE 308
Query: 242 DVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYA 301
+ +G+VAV +TGD++Y EF+D R+ L+ L +SP E+LL + L +T +++ A+
Sbjct: 309 NTTVGLVAVNCTTGDLIYDEFSDDVSRAALDTRLAHISPVEVLLPKNLHSRTARLIHAFH 368
Query: 302 GPASNVRVECASRDCFIGGGALAEVMSLYEN--------MGEDTLSNNEDQNMDVPEQGN 353
+ VR E S D F A + + + + +++
Sbjct: 369 --SDGVREERLSDDHFDVTRAASVITDFFSDSPHTASPTAATPPSPSSKSTATTTSAAAK 426
Query: 354 HRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGS-MEMTLSANTLQQ 412
+ + + ++++P + +A + HLK F LER++ L +S R + + EM L+A TL+
Sbjct: 427 NATIVSTMLSLPPRVLACMAALLHHLKAFNLERVLALTSSLRRFTTTGREMILNACTLKN 486
Query: 413 LEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESM 472
L+VLR S GS G+LL +++HT T +G RLLR WV PL I R V + +
Sbjct: 487 LDVLREQSTGSHQGSLLWLLDHTCTSFGRRLLRHWVARPLVSFTDIEERQRTVELFSSAF 546
Query: 473 GSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF 532
G D L S+L+ + PDI+RG+ ++ + ++P EF
Sbjct: 547 -------QTGADD----------------LRSLLSGI---PDIERGLLTVYSQRSSPREF 580
Query: 533 IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTV 592
A++ A+ + L + S+LL +L+ T + A + +
Sbjct: 581 HALVTAMSRVREHFVMLQAHSVLKR--------SSLLSKLVETVCD--ALETATNYVGMM 630
Query: 593 NKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
KEAA++ D ++L++ + F + + + K EL + + LG+ E+ VS
Sbjct: 631 KKEAAEKNDKIDLLVDCHHIFPTKRPLEEQLTTVKHELATHKRTICRTLGLNAFEYTCVS 690
Query: 653 GITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
G +LIE+P + VP +W +++TK+ +RY S + L+ +A NE+L I AW
Sbjct: 691 GEDYLIEVPRSRSSIVPKDWRTISATKQKVRYRSQFIHERLEVMAQCNEQLQIDAAEAWR 750
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEP 759
F++ F Y E + ++ALA LDCL +LA ++ +V+P + H P
Sbjct: 751 KFMESFSASYDELRRGIKALATLDCLLSLAHTAKLPGYVKPTLL-SHAP 798
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 132/176 (75%)
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
+HI +GRHP++ +L D FVPN T++ + C +ITGPNMGGKS YI+QVALI +MAQ
Sbjct: 857 HLHIVNGRHPMVAAVLDDQFVPNSTHMDGDGVRCMVITGPNMGGKSSYIKQVALIVMMAQ 916
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G FVPA SAEL ++ IYTRMGASD I++G+STF+ EL EAS L N SLVI+DEL
Sbjct: 917 LGCFVPADSAELTLVTNIYTRMGASDDIERGQSTFMTELREASEALCNADTHSLVIMDEL 976
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL 936
GRGTSTHDGVAIA+ATL YL++ +C+ LFVTHYP +A++ + V H+S++
Sbjct: 977 GRGTSTHDGVAIAHATLKYLIDKLRCLSLFVTHYPSLAEVTALYPQHVLCSHMSFV 1032
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN-RSAKRD 1009
Q V +L+++V G+++ S+G VA+LA LP S ++RAT + +LE V +R ++ + + +
Sbjct: 1113 QRVLFLHQLVKGLAKKSYGLNVARLACLPESVLARATEKSHELECVVQARRRSEQQSNME 1172
Query: 1010 LLVKLSDQEQEAQ 1022
L + Q ++AQ
Sbjct: 1173 LFAQALLQTEDAQ 1185
>gi|301105941|ref|XP_002902054.1| DNA mismatch repair protein Msh3, putative [Phytophthora infestans
T30-4]
gi|262099392|gb|EEY57444.1| DNA mismatch repair protein Msh3, putative [Phytophthora infestans
T30-4]
Length = 888
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 273/943 (28%), Positives = 442/943 (46%), Gaps = 96/943 (10%)
Query: 92 LEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLN 151
+E+QVV L+ YP+ LL+ E GY+ R FG+DAE AA VL I A NF+ S+P R
Sbjct: 1 MEKQVVRLRKAYPNTLLLFECGYRMRIFGKDAENAAAVLDIRAQQHKNFLETSVPVHRTL 60
Query: 152 VHVRRLVNAGFKVGVVKQTETAAIKA--HGPG-KAGPFGRGLSALYTKATLEAAEDVGGG 208
H RRLV+AGFKVGVVKQ ++ A++A PG + P R ++ +YT+AT+ E+ G
Sbjct: 61 FHARRLVHAGFKVGVVKQMDSVAMRAVNKAPGAQRKPLERCVTDIYTRATIPELENCGDD 120
Query: 209 EDGCGGESNYLVCVVDD-------------DGNVGKIRNGVFGDGFDVRLGVVAVEISTG 255
+ + ++ C+V++ + + R+ VF + DVR+G+ +I TG
Sbjct: 121 SEEEDTIARFIACIVEETIHSKPFFSQSMHEVDEETKRSPVFSE--DVRIGIFMHDIHTG 178
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPASNVRVECASR 314
+ + EF D R L+ L +L P E +L LS TE+++ + + V
Sbjct: 179 ESKFDEFEDDGKRQRLQRTLETLDPVEFVLPAGRLSAYTEQIVDTFVAISDETSV----- 233
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
I M N D + E E G+ + N+P + V
Sbjct: 234 ---IDDRKATVRMERIPNEAFDYSAAKETFTRAFHEAGSEYTTTVAYPNLPKMCVCCFGG 290
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSM-----EMTLSANTLQQLEVLRNNSNGSEYGTLL 429
++L G + + + ++ SLS + L + L++ N++ G+LL
Sbjct: 291 MWQYLSSLGTAQTL-IAPTYTSLSSPTSTFAGQFHLPTEAYRDLDLFVNSTTKRGVGSLL 349
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
I+NHT T G+R LR W+ PL D I+AR + +A GS T ES+
Sbjct: 350 SILNHTKTSAGARKLRDWIRSPLVDVQEIAARQKTIESLAFPSGSLST-ESIPHRLAYEE 408
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
T + P RS + + + ++ ATPS+ + +Q + Q +
Sbjct: 409 LTTTILP--------------RSKHLLKYLQQVHLGKATPSQAVGALQIL-----QDLED 449
Query: 550 HIDGEYREKVTSKTL----HSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
HI G K T ++ + +L RL+ P + + LL V+ + A
Sbjct: 450 HIHG---LKATFASITDVDQTTVLDRLL--EGYPTLQARLTPLLDEVDVKYAQPS----- 499
Query: 606 MIISNGQFSEVARARKA----VQSAKEELDSLINMCRKQLGMRNLEFM-----SVSGITH 656
+AR +A +++ E D+++ CR L LE+ S+S I H
Sbjct: 500 ----------LARKYRAFTRELETLAREYDAVLVTCRSALRDPLLEYSTFRGGSLSDIHH 549
Query: 657 LIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
LIE+ + VP +W VNST + +R+H +++ Q ++ + RA W F+
Sbjct: 550 LIEVKRSDLHVVPQDWLVVNSTTQLVRFHPKQIIQLHIQEEFVKQQKEQLVRALWRQFVS 609
Query: 715 EFGG-YYAEFQAAVQALAALDCLHALATLSRN-KNFVRPVFVDDHEPVQIHICSGRHPVL 772
E Y A V LA LD L +LAT++++ N+ +P FVDD + V + I GRHP++
Sbjct: 610 EVDAQVYVTGMACVDILANLDALCSLATVAQSYPNYTKPQFVDD-DVVTLEINDGRHPII 668
Query: 773 DTILL-DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
+ +L +++ N + + +++GPNMGGK+ +R AL+ I+AQ+GSFVPASS
Sbjct: 669 EMLLEGSSYISNSVLISSTAGSLMVVSGPNMGGKTSLLRMCALVVILAQIGSFVPASSVR 728
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
L V DG+YT M S S S+ +EL I RN T SLV++DE+G G + A
Sbjct: 729 LSVFDGVYTLMHRSTS---KYSSCAQELTTLGSISRNATKNSLVLIDEIGFGMAAQYAEA 785
Query: 892 IAYATLDYLLEHKKCMVLFVTHYPKIAD-IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
+A + YL + C+V+F TH + + + T + Y + ++
Sbjct: 786 VAVGQMTYLTDTAGCLVVFATHLTAATEKLLARLGDKCQTRQLEYHFYDQEEADAHTEIQ 845
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
VT+ Y + GV+ S + A+ A + + ++RAT + L
Sbjct: 846 DVVTFHYVLKDGVASDSVAIETARRAGIASAILARATELIGSL 888
>gi|167040248|ref|YP_001663233.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750830|ref|ZP_05491715.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914332|ref|ZP_07131648.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307724432|ref|YP_003904183.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
gi|166854488|gb|ABY92897.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750413|gb|EEU63432.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889267|gb|EFK84413.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307581493|gb|ADN54892.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
Length = 867
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 270/928 (29%), Positives = 453/928 (48%), Gaps = 130/928 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +++K KY D +L +G + F EDAE+AAK L I A + A
Sbjct: 4 TPMMEQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ +L+ G+KV + +Q E P KA G R + +YT T+ E
Sbjct: 64 VPYHAADFYIDKLIKKGYKVAICEQLE-------DPAKAKGLVKRDVVRIYTPGTIINPE 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYLV V N G+ AV+++TGD+ E
Sbjct: 117 SMDEKTN------NYLVSVFKGRDN----------------YGICAVDVTTGDLYATELK 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + + +P+E++ + K + + + + +C I
Sbjct: 155 NCKDTKRVYDEITKYAPSEIIANEDFLKNNKYIKI------------FKNNNCAI----- 197
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA--VQALALTIRHLKQ 381
N+ E L E + + Q N +S GI + P +A + AL ++ L++
Sbjct: 198 --------NIYEKQLDYEEKIKL-IETQFNKKSEELGIKDKPYMANSLAALFSYLQELQK 248
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L+ I L + M L +N ++ LE+L +N N S+ G+LL +++ T+T G
Sbjct: 249 TALKHINKLLI----YEDNSYMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL ++ I ARL AV E+ Y+ + + Q
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEEL---FNDYKNRQDLKQL----------------- 344
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L + D++R ++I +++ P +FI++ + LQ L E EK S
Sbjct: 345 -------LNKIYDLERLASKIVYQSINPKDFISIKLS-------LQNLPYIKEILEKFNS 390
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
+ L K IL + ST KE II +G V + RK
Sbjct: 391 RLLKEICEKFDILQDIYELIDKSIKDDPSTQLKEGN---------IIKDGYNETVDKLRK 441
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKT 679
A K + +L R++ G++NL + IE+ +N +VP + + +
Sbjct: 442 ASTEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERFIRKQTLANA 501
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY +PE+ + + A E+L + ++ ++ Q + +A +D L +
Sbjct: 502 ERYVTPELKEIEETILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYIAIIDVLISF 561
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITG 799
A ++ +++P+ VD + +I I GRHPV++TI ++FV ND ++ +E IITG
Sbjct: 562 AEVAETNRYIKPI-VDYSD--RIVIKEGRHPVIETISDESFVANDIDIGSENP-IMIITG 617
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS Y+RQVALI +MAQ+GSFVPAS A++ ++D I+TR+GASD I G+STF+ E+
Sbjct: 618 PNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEM 677
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD 919
+E + IL++ T++SL+I+DE+GRGTST+DG++IA+A ++Y+ E K LF THY ++
Sbjct: 678 SEVANILKSATSKSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTK 737
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLP 979
++ K G V Y+VS ++ + D D+ +L K+VPG ++ S+G +V++LA LP
Sbjct: 738 LEGKMKG-VRNYNVS----------VEERED-DIIFLRKIVPGGADKSYGIQVSKLAGLP 785
Query: 980 PSCISRATVIAAKLEAE--VSSRVQNRS 1005
S + RA I LE + + S ++N S
Sbjct: 786 YSIVERAKEILNSLENDKAIKSELENAS 813
>gi|326389401|ref|ZP_08210968.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
gi|325994406|gb|EGD52831.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
Length = 867
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 268/928 (28%), Positives = 453/928 (48%), Gaps = 130/928 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +++K KY D +L +G + F EDAE+AAK L I A + A
Sbjct: 4 TPMMEQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ +L+ G+KV + +Q E P KA G R + +YT T+ E
Sbjct: 64 VPYHAADFYIDKLIKKGYKVAICEQLE-------DPAKAKGLVKRDVVRIYTPGTIINPE 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYLV V N G+ AV+++TGD+ E
Sbjct: 117 SMDEKTN------NYLVSVFKGRDN----------------YGICAVDVTTGDLYATELK 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + + +P+E++ + K + + + + +C +
Sbjct: 155 NCKDIKRVYDEITKYAPSEIIANEDFLKNNKYIKI------------FKNNNCAV----- 197
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA--VQALALTIRHLKQ 381
N+ E L E + + Q N +S GI + P +A + AL ++ L++
Sbjct: 198 --------NIYEKQLDYEEKIKL-IETQFNKKSEELGIKDKPYMANSLAALFSYLQELQK 248
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L+ I L + M L +N ++ LE+L +N N S+ G+LL +++ T+T G
Sbjct: 249 TALKHINKLLI----YEDNSYMGLDSNAIKNLEILESNRNKSKKGSLLGVLDKTVTPMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL ++ I ARL+AV E+ Y+ + + Q
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLEAVEEL---FNDYKNRQDLKQF----------------- 344
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L + D++R ++I +++ P +FI++ + LQ L E EK S
Sbjct: 345 -------LNKIYDLERLASKIVYQSINPKDFISIKLS-------LQNLPYIKEILEKFNS 390
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
+ L K L + ST KE II +G V + RK
Sbjct: 391 RLLKEICEKFDTLQDIYELIDKSIKDDPSTQLKEGN---------IIKDGYNETVDKLRK 441
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKT 679
A K + +L R++ G++NL + IE+ +N +VP + + +
Sbjct: 442 ASTEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANA 501
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY +PE+ + + A E+L + ++ ++ Q + +A +D L +
Sbjct: 502 ERYVTPELKEIEETILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYIATIDVLISF 561
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITG 799
A ++ +++P+ VD + +I I GRHPV++TI ++FV ND ++ E IITG
Sbjct: 562 AEVAETNRYIKPI-VDYSD--RIVIKEGRHPVIETISDESFVANDIDIGPENP-IMIITG 617
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS Y+RQVALI +MAQ+GSFVPAS A++ ++D I+TR+GASD I G+STF+ E+
Sbjct: 618 PNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEM 677
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD 919
+E + IL++ T++SL+I+DE+GRGTST+DG++IA+A ++Y+ E K LF THY ++
Sbjct: 678 SEVANILKSATSKSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTK 737
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLP 979
++ K G V Y+VS ++ + D D+ +L K+VPG ++ S+G +V++LA LP
Sbjct: 738 LEGKMRG-VRNYNVS----------VEERED-DIIFLRKIVPGGADKSYGIQVSKLAGLP 785
Query: 980 PSCISRATVIAAKLEAE--VSSRVQNRS 1005
S + RA I LE++ + S ++N S
Sbjct: 786 YSIVERAKEILNSLESDKVIKSELENAS 813
>gi|19075844|ref|NP_588344.1| DNA mismatch repair protein [Schizosaccharomyces pombe 972h-]
gi|39931686|sp|O74502.1|MSH6_SCHPO RecName: Full=DNA mismatch repair protein msh6
gi|6644186|gb|AAF20943.1|AF207839_1 mismatch repair protein Msh6 [Schizosaccharomyces pombe]
gi|3581916|emb|CAA20855.1| MutS protein homolog [Schizosaccharomyces pombe]
Length = 1254
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 262/954 (27%), Positives = 433/954 (45%), Gaps = 112/954 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL IP PS+ T + P E+Q ++K D ++ + G + + DA +
Sbjct: 357 PNYDPRTLY-IP-PSAWAT----FKPFEKQFWKIKKDLMDTVVFFQKGKFYELYENDAAI 410
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA-----HGP 180
+V + N IP + + + G+++ V Q ETA K
Sbjct: 411 GHQVFSLKLTDRVNMKMVGIPEASFDYWASQFIAKGYRIARVDQLETALGKEIKDRQRTQ 470
Query: 181 GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDG 240
+ RGL+ + T TL + + D I+ + D
Sbjct: 471 KEEKVVQRGLTQVLTSGTL----------------VDEAMLTSDLSTYCMAIKESLQSDN 514
Query: 241 FDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY 300
+ G+ ++ STG EF D R+ L+ +L + P EL+L + SK ++K + A
Sbjct: 515 EEPSFGICFIDTSTGGFHMCEFTDDIHRTKLDTLLTQVRPKELILEK--SKISQKSIRAI 572
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
+ C + ++ + Y +NE ++ ++ +EG
Sbjct: 573 -------------KYC-VSSSSIWNFIKPYTEFW-----DNERVEREIIAGDYFKNGLEG 613
Query: 361 -------IMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT---LSANTL 410
++ LA+ A +L+Q L++ MC +F S + T ++ TL
Sbjct: 614 APKILKSYLSEKPLAISAFGALFWYLRQLKLDKDMCSMGNFDEYDASQQSTSLLMNGQTL 673
Query: 411 QQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE 470
+ LE+ N+ +G GTL H++ +T +G RL W+ HPL I+ARLD V IA+
Sbjct: 674 KNLEIFSNSFDGGSEGTLFHLLCRCVTPFGKRLFHTWLCHPLRSGTAINARLDVVELIAD 733
Query: 471 SMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPS 530
+ I ++ L + PD++R I+R+ + P+
Sbjct: 734 NP---------------------------VIRDTIWGFLHKLPDLERLISRVHAGRSKPA 766
Query: 531 EFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLS 590
+F+ V++ QL E+ E V TL +++ S+P + +
Sbjct: 767 DFVRVLEGFQRINSAFDQLR--EEFME-VAEGTLLGEIIQ------SAPNMKEELEAWTR 817
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
N + A + + I G +E ++K K EL +L+ +KQL +L F +
Sbjct: 818 AFNWQKASEEGVFEPEI---GFEAEYDTSQKYQSELKNELYALLEQYKKQLRCSSLNFKN 874
Query: 651 VSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANE-ELTIVCRAAW 709
+ + +E+P++ KVP+NW K++ TKKT RY++ E+ + +L A E L I+ R
Sbjct: 875 IGKEVYQVEVPSDVKVPVNWCKMSGTKKTNRYYNDELRKKIKKLLEAEELHLAIMSRMQ- 933
Query: 710 DSFLKEFGGYYAEFQAAVQALAALDCLHAL--ATLSRNKNFVRPVFVDDHEPVQIHICSG 767
+ F F Y ++ A ++ A++DC +L A + + + RP ++ + ++
Sbjct: 934 EKFYIRFDSNYEQWLALIKYTASIDCFFSLSQAAAALGEPYCRPEIIEQKDG-HLYFEEL 992
Query: 768 RHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPA 827
RHP ++ FVPND L E ++TGPNM GKS +RQV + IMAQ+G +VPA
Sbjct: 993 RHPCINASAASTFVPNDVVLGGESPNMIVLTGPNMAGKSTLLRQVCIAVIMAQLGCWVPA 1052
Query: 828 SSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTH 887
A + + IYTR+GA+D I RSTF+ EL+E IL C +SLVI+DELGRGTST+
Sbjct: 1053 KRASITPMTSIYTRLGANDDIMSARSTFMVELSETKKILDECGPKSLVILDELGRGTSTY 1112
Query: 888 DGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
DG AIAYA L +L+ + C+ F THY + V H + ++ +D
Sbjct: 1113 DGHAIAYAVLHHLVSNIGCLGFFSTHYQSLC---------VDFMHHRQVRLMQMAAAVDE 1163
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
K + VT+LYK+ G+ S+G VA +A LP I A A++LE +S +
Sbjct: 1164 KI-RRVTFLYKLEDGICPKSYGMNVASMAGLPEKVIDAAEEKASELEQASASFI 1216
>gi|345017667|ref|YP_004820020.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033010|gb|AEM78736.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii Rt8.B1]
Length = 867
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 271/928 (29%), Positives = 451/928 (48%), Gaps = 130/928 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +++K KY D +L +G + F EDAE+AAK L I + A
Sbjct: 4 TPMMEQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDVGTEERAPMAG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ +L+ G+KV + +Q E P KA G R + +YT T+ E
Sbjct: 64 VPYHAADFYIDKLIKKGYKVAICEQLE-------DPAKAKGLVKRDVVRIYTPGTIINPE 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYLV V N G+ AV+++TGD+ E
Sbjct: 117 SMDEKTN------NYLVSVFKGRDN----------------YGICAVDVTTGDLYATELK 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + + +P+E++ + K + Y N +C I
Sbjct: 155 NCKDTKRVYDEITKYAPSEIIANEDFLKNNK-----YVKIFKN-------NNCAI----- 197
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA--VQALALTIRHLKQ 381
N+ E L E + + Q N +S GI + P +A + AL ++ L++
Sbjct: 198 --------NIYEKQLDYEEKIKL-IETQFNKKSEELGIKDKPYMANSLAALFSYLQELQK 248
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L+ I L + M L +N ++ LE+L +N N S+ G+LL +++ T+T G
Sbjct: 249 TALKHINKLLI----YEDNSYMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL ++ I ARL AV E+ Y+ + + Q
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEEL---FNDYKNRQDLKQL----------------- 344
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L + D++R ++I +++ P +FI++ + LQ L E EK S
Sbjct: 345 -------LNKIYDLERLASKIVYQSINPKDFISIKLS-------LQNLPYIKEILEKFNS 390
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
+ L K IL + ST KE II +G V + RK
Sbjct: 391 RLLKEICEKFDILQDIYELIDKSIKDDPSTQLKEGN---------IIKDGYNETVDKLRK 441
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKT 679
A K + +L R++ G++NL + IE+ +N +VP + + +
Sbjct: 442 ASTEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERFIRKQTLANA 501
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY +PE+ + + A E+L + ++ ++ Q + +A +D L +
Sbjct: 502 ERYVTPELKEIEETILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYIAIIDVLISF 561
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITG 799
A ++ +++P+ VD + +I I GRHPV++TI ++FV ND ++ +E IITG
Sbjct: 562 AEVAETNRYIKPI-VDYSD--RIVITEGRHPVIETISDESFVANDIDIGSENP-IMIITG 617
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS Y+RQVALI +MAQ+GSFVPAS A++ ++D I+TR+GASD I G+STF+ E+
Sbjct: 618 PNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEM 677
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD 919
+E + IL++ T++SL+I+DE+GRGTST+DG++IA+A ++Y+ E K LF THY ++
Sbjct: 678 SEVANILKSATSKSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTK 737
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLP 979
++ K G V Y+VS ++ + D D+ +L K+VPG ++ S+G +V++LA LP
Sbjct: 738 LEGKMKG-VRNYNVS----------VEERED-DIIFLRKIVPGGADKSYGIQVSKLAGLP 785
Query: 980 PSCISRATVIAAKLEAE--VSSRVQNRS 1005
S + RA I LE + + S ++N S
Sbjct: 786 YSIVERAKEILNSLENDKVIKSELENAS 813
>gi|164656521|ref|XP_001729388.1| hypothetical protein MGL_3423 [Malassezia globosa CBS 7966]
gi|159103279|gb|EDP42174.1| hypothetical protein MGL_3423 [Malassezia globosa CBS 7966]
Length = 799
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 262/874 (29%), Positives = 409/874 (46%), Gaps = 134/874 (15%)
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P L V+V+RL+ G+KVGV +QTET A+KA PF R LS +YT +T +
Sbjct: 2 VPATHLEVYVKRLIAHGYKVGVCRQTETRALKAVTENANRPFERKLSGVYTASTW--IDH 59
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
V C ++C + D L V+++++T + Y E+ D
Sbjct: 60 VS----CCEKSDEQVICAIVDRPTSRTC----------TALAFVSIDMATSSITYDEWLD 105
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDC------FI 318
R GL ++ L P E++L LS T + + YA ++ V +R+ F+
Sbjct: 106 DSTREGLYTRIMHLVPREVVLLSSLSDGTRRAVSMYAAASATYNVRMETREAFEPLASFL 165
Query: 319 GGGALAEVMSL--YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
G LA ++ E L D+ ++ +
Sbjct: 166 QGDVLAWALAACPVEVQRALALLLTYLATYDLTSAFHY---------------------V 204
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
H F M L S TLS LE+LRN ++ G+L +++
Sbjct: 205 DHYATFTSRSSMVLSGS----------TLS-----HLELLRNATDHGGDGSLFWLLDECA 249
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G RLLR+W+ PL D I AR DAVS + E + D
Sbjct: 250 TSMGRRLLRQWIRRPLVDPVAIQARADAVSLLRE------------RRDR---------- 287
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
IL V++ L PD+ RG+TRI + P+E ++++ + ++ E
Sbjct: 288 ----ILHRVVSLLTHLPDLTRGLTRILYTLVDPAELVSILLTLYRVTHEI-------EAH 336
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
+ S L++AL L A V + +S ++ A ++L +++
Sbjct: 337 DSTRSTLLNTALQD---LRAPKSEV----SAFVSALHIPNARSNSKVSL-------YTDS 382
Query: 617 ARARKAVQSAKEELDS--------LINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKV 666
+R A+Q K++L+ L+++ R+ L L+F+S++GI HLIE+ A+ +V
Sbjct: 383 SRY-PAIQKWKQQLEDDELAAQLQLVDI-RRILRRPALQFISIAGIDHLIEVRASDAGRV 440
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P +W ++NSTK+ +R+H+P ++ Q E LT V A+ F++ Y + A
Sbjct: 441 PADWVRINSTKRAVRFHTPAIVELQRQRDRHREMLTAVANEAFRDFVRHVAQAYMPLRRA 500
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
V ALA +D L +LA ++ +VRP D +Q+ C RHPV + + ++PND
Sbjct: 501 VHALATIDVLTSLARVASRPGYVRPHVHDQGNLIQLRQC--RHPVTEA-RTNGYIPNDIA 557
Query: 787 L----HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
L E ++TG NMGGKS +R +AL IMAQ+GSFVP SAE+ D I +RM
Sbjct: 558 LGSLKQTEAPRGMLLTGSNMGGKSSMMRAIALTIIMAQIGSFVPCQSAEITCRDAIASRM 617
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GA D I +G STFL E E ++ILR T ++LV++DE GRGTST DG+A+AYA L LE
Sbjct: 618 GARDDILRGESTFLVEARETAFILRTSTPRTLVLLDEFGRGTSTFDGMALAYAVLRSFLE 677
Query: 903 HKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
M +LF+THY + + F + H+ +V + +V +L++V+
Sbjct: 678 RGPAMPTLLFITHYVPLTRLAHLFPQQLMNVHM------QVQIMRHQGKEDEVVFLHRVL 731
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
PG + SFG A L+ +P + I RA A +LE
Sbjct: 732 PGAASRSFGIHAAALSGIPTTIIERAKSKALELE 765
>gi|167037586|ref|YP_001665164.1| DNA mismatch repair protein MutS [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320116001|ref|YP_004186160.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856420|gb|ABY94828.1| DNA mismatch repair protein MutS [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319929092|gb|ADV79777.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 867
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 268/928 (28%), Positives = 450/928 (48%), Gaps = 130/928 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +++K KY D +L +G + F EDAE+AAK L I A + A
Sbjct: 4 TPMMEQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ +L+ G+KV + +Q E P KA G R + +YT T+ E
Sbjct: 64 VPYHAADFYIDKLIKKGYKVAICEQLE-------DPAKAKGLVKRDVVRIYTPGTIINPE 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYLV V N G+ AV+++TGD+ E
Sbjct: 117 SMDEKTN------NYLVSVFKGRDN----------------YGICAVDVTTGDLYATELK 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + + +P+E++ + K + + + + +C +
Sbjct: 155 NCKDIKRVYDEITKYAPSEIIANEDFLKNNKYIKI------------FKNNNCAV----- 197
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA--VQALALTIRHLKQ 381
N+ E L E + + Q N +S GI + P +A + AL ++ L++
Sbjct: 198 --------NIYEKQLDYEEKIKL-IETQFNKKSEELGIKDKPYMANSLAALFSYLQELQK 248
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L+ I L + M L +N ++ LE+L +N N S+ G+LL +++ T+T G
Sbjct: 249 TALKHINKLLI----YEDNSYMGLDSNAIKNLEILESNRNKSKKGSLLGVLDKTVTPMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL + I ARL+AV E+ Y+ + + Q
Sbjct: 305 RLLKKWLEEPLLSKEHIDARLEAVEEL---FNDYKNRQDLKQF----------------- 344
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L + D++R ++I +++ P +FI++ + LQ L E EK S
Sbjct: 345 -------LNKIYDLERLASKIVYQSINPKDFISIKLS-------LQNLPYIKEILEKFNS 390
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
+ L K L + ST KE II G V + RK
Sbjct: 391 RLLKEICEKFDTLQDIYELIDKSIKDDPSTQLKEGN---------IIKGGYNEIVDKLRK 441
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKT 679
A K + +L R++ G++NL + IE+ +N +VP + + +
Sbjct: 442 ASTEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANA 501
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY +PE+ + + A E+L + ++ ++ Q + +A +D L +
Sbjct: 502 ERYVTPELKEIEETILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYIATIDVLISF 561
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITG 799
A ++ +++P+ VD + +I I GRHPV++TI ++FV ND ++ E IITG
Sbjct: 562 AEVAETNRYIKPI-VDYSD--RIVIKEGRHPVIETISDESFVANDIDIGPENP-IMIITG 617
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS Y+RQVALI +MAQ+GSFVPAS A++ ++D I+TR+GASD I G+STF+ E+
Sbjct: 618 PNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEM 677
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD 919
+E + IL++ T++SL+I+DE+GRGTST+DG++IA+A ++Y+ E K LF THY ++
Sbjct: 678 SEVANILKSATSKSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTK 737
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLP 979
++ K G V Y+VS ++ + D D+ +L K+VPG ++ S+G +V++LA LP
Sbjct: 738 LEGKMKG-VRNYNVS----------VEERED-DIIFLRKIVPGGADKSYGIQVSKLAGLP 785
Query: 980 PSCISRATVIAAKLEAE--VSSRVQNRS 1005
S + RA I LE + + S ++N S
Sbjct: 786 YSIVERAKEILNSLENDKVIKSELENAS 813
>gi|392940989|ref|ZP_10306633.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
gi|392292739|gb|EIW01183.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
Length = 867
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 264/926 (28%), Positives = 449/926 (48%), Gaps = 126/926 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +++K KY D +L +G + F EDAE+AAK L I A + A
Sbjct: 4 TPMMEQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ +L+ G+KV + +Q E P KA G R + +YT T+ E
Sbjct: 64 VPYHAADFYIDKLIKKGYKVAICEQLE-------DPAKAKGLVKRDVVRIYTPGTIINPE 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYLV V N G+ AV+++TGD+ E
Sbjct: 117 SMDEKTN------NYLVSVFKGRDN----------------YGICAVDVTTGDLYATELK 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + + +P+E++ + K + + + + +C +
Sbjct: 155 NCKDIKRVYDEITKYAPSEIIANEDFLKNNKYIKI------------FKNNNCAV----- 197
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
N+ E L E + + Q N +S GI + +A +LA +L++
Sbjct: 198 --------NIYEKQLDYEEKIKL-IETQFNKKSEELGIKDKLYMA-NSLATLFSYLQELQ 247
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
+ + S M L +N ++ LE+L +N N S+ G+LL +++ T+T G RL
Sbjct: 248 KTALKHINKLLIYEDNSY-MGLDSNAIKNLEILESNRNKSKKGSLLGVLDKTVTPMGGRL 306
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
L++W+ PL ++ I ARL+AV E+ Y+ + + Q
Sbjct: 307 LKKWLEEPLLNKEHIDARLEAVEEL---FNDYKNRQDLKQF------------------- 344
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
L + D++R ++I +++ P +FI++ + LQ L E EK S+
Sbjct: 345 -----LNKIYDLERLASKIVYQSINPKDFISIKLS-------LQNLPYIKEILEKFNSRL 392
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
L K L + ST KE II +G V + RKA
Sbjct: 393 LKEICEKFDTLQDIYELIDKSIKDDPSTQLKEGN---------IIKDGYNETVDKLRKAS 443
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKTIR 681
K + +L R++ G++NL + IE+ +N +VP + + + R
Sbjct: 444 TEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANAER 503
Query: 682 YHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALAT 741
Y +PE+ + + A E+L + ++ ++ Q + +A +D L + A
Sbjct: 504 YVTPELKEIEETILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYIATIDVLISFAE 563
Query: 742 LSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPN 801
++ +++P+ VD + +I I GRHPV++TI +++V ND ++ E IITGPN
Sbjct: 564 VAETNRYIKPI-VDYSD--RIVIKEGRHPVIETISDESYVANDIDIGPENP-IMIITGPN 619
Query: 802 MGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNE 861
M GKS Y+RQVALI +MAQ+GSFVPAS A++ ++D I+TR+GASD I G+STF+ E++E
Sbjct: 620 MAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSE 679
Query: 862 ASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIK 921
+ IL++ T++SL+I+DE+GRGTST+DG++IA+A ++Y+ E K LF THY ++ ++
Sbjct: 680 VANILKSATSKSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTKLE 739
Query: 922 TKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPS 981
K G V Y+VS ++ + D D+ +L K+VPG ++ S+G +V++LA LP S
Sbjct: 740 GKMRG-VRNYNVS----------VEERED-DIIFLRKIVPGGADKSYGIQVSKLAGLPYS 787
Query: 982 CISRATVIAAKLEAE--VSSRVQNRS 1005
+ RA I LE++ + S ++N S
Sbjct: 788 IVERAKEILNSLESDKVIKSELENAS 813
>gi|348684670|gb|EGZ24485.1| hypothetical protein PHYSODRAFT_311440 [Phytophthora sojae]
Length = 929
Score = 332 bits (852), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 273/962 (28%), Positives = 464/962 (48%), Gaps = 93/962 (9%)
Query: 92 LEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLN 151
+E+QVV L+ +PD LL+ E GY+ R F EDAE AA VLGI A NF+ AS+P R
Sbjct: 1 MEKQVVRLRRTHPDTLLLFECGYRMRIFAEDAENAAAVLGIRAQRHKNFVEASVPVHRTL 60
Query: 152 VHVRRLVNAGFKVGVVKQTETAAIKAHG--PG-KAGPFGRGLSALYTKATLEAAEDVGGG 208
H RRLV+AGFKVGVV+QT++ A +A PG + P R ++ +YT+AT+ ++ GG
Sbjct: 61 FHARRLVHAGFKVGVVRQTDSVATRAASKTPGAQRKPLERCVAEVYTRATIPDVDE--GG 118
Query: 209 EDGCGGE---SNYLVCVVDDDGNVGKI-------------RNGVFGDGFDVRLGVVAVEI 252
+D E + ++ C+V+ + R+ F + +VR+G+ ++
Sbjct: 119 DDSDEEEDTRTRFIACIVEASVHSKPFFSQSMHEIDEETKRSQAFSE--EVRIGIFVHDV 176
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPASNVRVEC 311
TG+ + EF D R L+ L SL P E +L LS TE++L ++ S+ V
Sbjct: 177 HTGETKFDEFEDDGKRQRLQRTLESLDPVEFVLPAGRLSAYTEQVLESFVTAQSD-SVFI 235
Query: 312 AS--------RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
AS R C E ++ ++T S E + +++ +
Sbjct: 236 ASDSSGDEELRSCIRVERIPNEFFEF--SLAKETFSGV------FREAESEYTSVVACPS 287
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSG-----SMEMTLSANTLQQLEVLRN 418
+P L V ++L + + + + ++ SL+ + + L A + L++ N
Sbjct: 288 LPKLCVCCFGGMWKYLSSLDMVQTL-IAPNYSSLASPTAAFTGQFYLPAEAHRDLDLFVN 346
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
++ G+LL ++NHT T G+R LR W+ PL I R + +A G T
Sbjct: 347 STTKRGVGSLLSVLNHTKTNAGARKLRDWIHTPLGSIPEIMERQKTIESLAFPPGPLST- 405
Query: 479 ESVGQHDEKNSDVTIVEPQFYYILSSVL-TSLGRSPDIQRGITRIFHRTATPSEFIA--- 534
ES+ T V P+ ++L+ + LG+ ATPS+ +
Sbjct: 406 ESLSHRIAYEELTTTVLPRSKHLLTFLQQVHLGK---------------ATPSQAVGALQ 450
Query: 535 VMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
++Q + K+L+ + + T + + LL RL+ S P + + + LL+ ++
Sbjct: 451 ILQDLEGHTKELKLMLASSPDNSRTTGNSEPATLLVRLL--GSYPMLDPRLSDLLNEIDT 508
Query: 595 EAADQGDLLNLMIISNGQFSEVARARK----AVQSAKEELDSLINMCRKQLGMRNLEFMS 650
+AA + D+ + + + AR + +++ + + D+++ CR L +LE+ +
Sbjct: 509 KAARRNDVEDTIQRRLRRKPSQARTYQDLSHELETLERQYDAILVCCRGVLDNPSLEYTT 568
Query: 651 VSG-----ITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
G I HLIE+ + VP +W VNSTKK +R+H E++ Q E+
Sbjct: 569 FRGGALNDIHHLIEVKRSDLHTVPRSWLVVNSTKKLVRFHPKEIIQLHVQEEFVKEQKDQ 628
Query: 704 VCRAAWDSFLKEFGG-YYAEFQAAVQALAALDCLHALATLSRN-KNFVRPVFVDDHEPVQ 761
+ R+ W F+ + G Y V LA LD L +LAT++++ N+ P FV+D +
Sbjct: 629 MVRSTWRQFVSDVDGQVYVVGMNCVDILANLDALCSLATVAQSYPNYTLPEFVED-DSTT 687
Query: 762 IHICSGRHPVLDTILL-DNFVPNDTNLHAEREY---CQIITGPNMGGKSCYIRQVALIGI 817
+ I GRHP+++ +L +++ N + + + +++GPNMGGK+ +R AL+ I
Sbjct: 688 LEIVDGRHPIIEMLLEGSSYISNSVLMSSSADSPGSLFVVSGPNMGGKTSLLRMCALVVI 747
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSI----QQGRSTFLEELNEASYILRNCTAQS 873
+AQ+GSFVPASS L + DG+YT M S + +G +EL I RN T +S
Sbjct: 748 LAQMGSFVPASSVRLSLFDGVYTLMHRSTTTLNPQNRGTPACAQELTALGSISRNATKRS 807
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY-PKIADIKTKFTGSVGTYH 932
LV++DE+G G + H A+ A + Y +E C V+F TH+ I ++ +
Sbjct: 808 LVLIDEIGFGMAAHYAEAVGVAQILYFVETVGCHVVFATHHTASIQKLQDRLGDKCQMKQ 867
Query: 933 VSYLTSHKVMGPM-DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAA 991
+ Y + D+++ VT+ Y + G++ SF + A+ A + S + RA V+
Sbjct: 868 LEYQFYERGGAECGDAEAGDVVTFHYVLKYGIASDSFAIETARRAGIAASILERAQVLRG 927
Query: 992 KL 993
L
Sbjct: 928 NL 929
>gi|297544629|ref|YP_003676931.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842404|gb|ADH60920.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 866
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 263/931 (28%), Positives = 448/931 (48%), Gaps = 128/931 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +++K KY D +L +G + F EDAE+AAK L I A + A
Sbjct: 4 TPMMEQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ +L+ G+KV + +Q E P KA G R + +YT T+ E
Sbjct: 64 VPYHAADFYIDKLIKKGYKVAICEQLE-------DPAKAKGLVKRDVVRIYTPGTIINPE 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYLV V + N G+ AV+++TGD+ E
Sbjct: 117 SMDEKTN------NYLVSVFKERDN----------------YGICAVDVTTGDLYATEIK 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + ++ +P+E++ + K + + + S +C +
Sbjct: 155 NCKDNKKVYDEIIKYAPSEIIANEDFLKNNKYIKI------------FKSNNCAV----- 197
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL--AVQALALTIRHLKQ 381
N E L E + + Q N + GI + P + ++ L + L++
Sbjct: 198 --------NTYEKKLYYEEKSKI-IENQFNKKLEELGIKDKPYVVNSLSTLFCYLNELQK 248
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L+ I L + M L +N ++ LE+L +N N S+ G+LL +++ T+T G
Sbjct: 249 TALKHINKLLI----YEDNSYMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL ++ I ARL AV E+ Y+ + + Q
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEEL---FNDYKNRQDLKQL----------------- 344
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L + D++R ++I +++ P +FI++ + LQ L E ++ +S
Sbjct: 345 -------LNKIYDLERLSSKIVYQSINPKDFISIKLS-------LQNLPYIKEILQRFSS 390
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
+ L K L + ST KE II +G V + RK
Sbjct: 391 RLLKDIYEKFDTLQDIYELIDKSIKDDPSTQLKEGN---------IIKDGYNETVDKLRK 441
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKT 679
A K + +L R++ G++NL + IE+ +N +VP + + +
Sbjct: 442 ASVEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTKSNIPQVPEKYIRKQTLANA 501
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY +PE+ + + A E+L + ++ ++ Q + +A +D L +
Sbjct: 502 ERYVTPELKEIEEAILGAEEKLIELEYQLFNEIREKIELQIVRIQDTAKYIATIDVLISF 561
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITG 799
A ++ + +P+ VD + +I I GRHPV++TI ++FV ND + E IITG
Sbjct: 562 AEVAETNRYTKPI-VDYSD--RIVIKEGRHPVIETISDESFVANDIEIGPENP-IMIITG 617
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS Y+RQVALI +MAQ+GSFVPAS A++ ++D I+TR+GASD I G+STF+ E+
Sbjct: 618 PNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEM 677
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD 919
+E + IL++ T++SL+I+DE+GRGTST+DG++IA+A ++Y+ E K LF THY ++
Sbjct: 678 SEVANILKSATSKSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTK 737
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLP 979
++ K G V Y+VS ++ + D D+ +L K+VPG ++ S+G +V++LA LP
Sbjct: 738 LEGKMKG-VRNYNVS----------VEERED-DIIFLRKIVPGGADKSYGIQVSKLAGLP 785
Query: 980 PSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
S + RA I LE + + + +A + L
Sbjct: 786 YSIVERAKEILKSLENDTVIKFELENAAQQL 816
>gi|289578351|ref|YP_003476978.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
gi|289528064|gb|ADD02416.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
Length = 866
Score = 332 bits (851), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 263/931 (28%), Positives = 448/931 (48%), Gaps = 128/931 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +++K KY D +L +G + F EDAE+AAK L I A + A
Sbjct: 4 TPMMEQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ +L+ G+KV + +Q E P KA G R + +YT T+ E
Sbjct: 64 VPYHAADFYIDKLIKKGYKVAICEQLE-------DPAKAKGLVKRDVVRIYTPGTIINPE 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYLV V + N G+ AV+++TGD+ E
Sbjct: 117 SMDEKTN------NYLVSVFKERDN----------------YGICAVDVTTGDLYATEIK 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + ++ +P+E++ + K + + + S +C +
Sbjct: 155 NCKDNKKVYDEIIKYAPSEIIANEDFLKNNKYIKI------------FKSNNCAV----- 197
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL--AVQALALTIRHLKQ 381
N E L E + + Q N + GI + P + ++ L + L++
Sbjct: 198 --------NTYEKKLYYEEKSKI-IKNQFNKKLEELGIKDKPYVVNSLSTLFCYLNELQK 248
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L+ I L + M L +N ++ LE+L +N N S+ G+LL +++ T+T G
Sbjct: 249 TALKHINKLLI----YEDNSYMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL ++ I ARL AV E+ Y+ + + Q
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEEL---FNDYKNRQDLKQL----------------- 344
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L + D++R ++I +++ P +FI++ + LQ L E ++ +S
Sbjct: 345 -------LNKIYDLERLSSKIVYQSINPKDFISIKLS-------LQNLPYIKEILQRFSS 390
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
+ L K L + ST KE II +G V + RK
Sbjct: 391 RLLKDIYEKFDTLQDIYELIDKSIKDDPSTQLKEGN---------IIKDGYNETVDKLRK 441
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKT 679
A K + +L R++ G++NL + IE+ +N +VP + + +
Sbjct: 442 ASVEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANA 501
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY +PE+ + + A E+L + ++ ++ Q + +A +D L +
Sbjct: 502 ERYVTPELKEIEEAILGAEEKLIELEYQLFNEIREKIELQIVRIQDTAKYIATIDVLISF 561
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITG 799
A ++ + +P+ VD + +I I GRHPV++TI ++FV ND + E IITG
Sbjct: 562 AEVAETNRYTKPI-VDYSD--RIVIKEGRHPVIETISDESFVANDIEIGPENP-IMIITG 617
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS Y+RQVALI +MAQ+GSFVPAS A++ ++D I+TR+GASD I G+STF+ E+
Sbjct: 618 PNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEM 677
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD 919
+E + IL++ T++SL+I+DE+GRGTST+DG++IA+A ++Y+ E K LF THY ++
Sbjct: 678 SEVANILKSATSKSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTK 737
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLP 979
++ K G V Y+VS ++ + D D+ +L K+VPG ++ S+G +V++LA LP
Sbjct: 738 LEGKMKG-VRNYNVS----------VEERED-DIIFLRKIVPGGADKSYGIQVSKLAGLP 785
Query: 980 PSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
S + RA I LE + + + +A + L
Sbjct: 786 YSIVERAKEILKSLENDTVIKFELENATQQL 816
>gi|254479232|ref|ZP_05092577.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
gi|214034833|gb|EEB75562.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
Length = 866
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 258/915 (28%), Positives = 444/915 (48%), Gaps = 125/915 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +++K KY D +L +G + F EDAE+AAK L I A + A
Sbjct: 4 TPMMEQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G+KV + +Q E P KA G R + +YT T+ E
Sbjct: 64 VPYHAADFYIDKLVKKGYKVAICEQLE-------DPSKAKGLVKRDVVRIYTPGTIINPE 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYLV V + N G+ AV+++TG++ E
Sbjct: 117 SMDEKSN------NYLVSVYREKDN----------------YGICAVDVTTGELYATEIK 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + + SP+E++ + K + + + + +C A+
Sbjct: 155 NCKDGKRIYDEIAKYSPSEIISNEEFLKNNKYIKV------------FKNNNC-----AV 197
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
L + + D+ ++ E + + I + + + +++H+ +
Sbjct: 198 NAYKPLNYEASSELIEKQFDKKVEELELEDKKFVIHSLGALLSYLKELQKTSLKHINKLT 257
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
L + M L +N ++ LE+L +N N S+ G+LL +++ T+T G RL
Sbjct: 258 L------------YQDNSYMGLDSNAIRNLEILESNRNKSKKGSLLGVLDRTVTPMGGRL 305
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
L++W+ PL D++ I RLDAV E+ +YR + +
Sbjct: 306 LKKWLEEPLIDKDEIEKRLDAVEEL---FNNYRERIELKEL------------------- 343
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
L + D++R ++I +++ TP +FI++ + LQ L K +S+
Sbjct: 344 -----LNKVYDLERLASKIVYQSVTPKDFISIKLS-------LQNLPKIKNILSKFSSRL 391
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
L + ++L + +I K+ K + ++Q L II +G V + RKA
Sbjct: 392 LKE-IYEKLDVLQDVYELIDKSIK------DDPSNQ--LKEGNIIKDGYNEMVDKLRKAS 442
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKTIR 681
K + +L R++ G++NL + IE+ +N +VP + + + R
Sbjct: 443 TEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTKSNIPQVPDRYIRKQTLANAER 502
Query: 682 YHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALAT 741
Y +PE+ + + A E+L + ++ ++ Q + +A +D L + A
Sbjct: 503 YVTPELKEIEETILGAEEKLIELEYELFNEIREKVELQIVRIQNTAKYIAIIDVLISFAE 562
Query: 742 LSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPN 801
++ +V+P+ D+E +I I GRHPV++TI + FV ND ++ E IITGPN
Sbjct: 563 VAETNKYVKPIV--DYED-RIVIKEGRHPVVETISDEGFVANDIDIGPENP-IMIITGPN 618
Query: 802 MGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNE 861
M GKS Y+RQVALI +MAQVG FVPAS A + ++D I+TR+GASD I G+STF+ E++E
Sbjct: 619 MAGKSTYMRQVALIVLMAQVGCFVPASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMSE 678
Query: 862 ASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIK 921
+ IL + T++SL+I+DE+GRGTST+DG++IA A ++Y+ E K LF THY ++ ++
Sbjct: 679 VANILHSATSKSLIILDEVGRGTSTYDGMSIAQAVIEYIHEKIKAKTLFATHYHELTKLE 738
Query: 922 TKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPS 981
K G V ++VS ++ + D D+ +L+K+VPG S+ S+G +V++LA LP S
Sbjct: 739 GKLRG-VRNFNVS----------VEERED-DIIFLHKIVPGGSDRSYGIQVSKLAGLPYS 786
Query: 982 CISRATVIAAKLEAE 996
I RA I LE +
Sbjct: 787 IIERAKEILEALEKD 801
>gi|20807804|ref|NP_622975.1| DNA mismatch repair protein MutS [Thermoanaerobacter tengcongensis
MB4]
gi|44888228|sp|Q8RA71.1|MUTS_THETN RecName: Full=DNA mismatch repair protein MutS
gi|20516362|gb|AAM24579.1| MutS-like ATPases involved in mismatch repair, family 2
[Thermoanaerobacter tengcongensis MB4]
Length = 869
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 258/913 (28%), Positives = 443/913 (48%), Gaps = 125/913 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +++K KY D +L +G + F EDAE+AAK L I A + A
Sbjct: 7 TPMMEQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G+KV + +Q E P KA G R + +YT T+ E
Sbjct: 67 VPYHAADFYIDKLVKKGYKVAICEQLE-------DPSKAKGLVKRDVVRIYTPGTIINPE 119
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYLV V + N G+ AV+++TG++ E
Sbjct: 120 SMDEKSN------NYLVSVYREKDN----------------YGICAVDVTTGELYATEIK 157
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + + SP+E++ + K + + + + +C A+
Sbjct: 158 NCKNGKRIYDEIAKYSPSEIISNEEFLKNNKYIKV------------FKNNNC-----AV 200
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
L + + D+ ++ E + + I + + + +++H+ +
Sbjct: 201 NAYKPLNYEASSELIEKQFDKKVEELELEDKKFVIHSLGALLSYLKELQKTSLKHINKLT 260
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
L + M L +N ++ LE+L +N N S+ G+LL +++ T+T G RL
Sbjct: 261 L------------YQDNSYMGLDSNAIRNLEILESNRNKSKKGSLLGVLDRTVTPMGGRL 308
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
L++W+ PL D++ I RLDAV E+ +YR + +
Sbjct: 309 LKKWLEEPLIDKDEIEKRLDAVEEL---FNNYRERIELKEL------------------- 346
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
L + D++R ++I +++ TP +FI++ + LQ L K +S+
Sbjct: 347 -----LNKVYDLERLASKIVYQSVTPKDFISIKLS-------LQNLPKIKNILSKFSSRL 394
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
L + ++L + +I K+ K + ++Q L II +G V + RKA
Sbjct: 395 LKE-IYEKLDVLQDVYELIDKSIK------DDPSNQ--LKEGNIIKDGYNEMVDKLRKAS 445
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKTIR 681
K + +L R++ G++NL + IE+ +N +VP + + + R
Sbjct: 446 TEGKNWIANLEADEREKTGIKNLRIGYNKVFGYYIEVTKSNIPQVPDRYIRKQTLANAER 505
Query: 682 YHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALAT 741
Y +PE+ + + A E+L + ++ ++ Q + +A +D L + A
Sbjct: 506 YVTPELKEIEETILGAEEKLIELEYELFNEIREKVELQIVRIQNTAKYIAIIDVLISFAE 565
Query: 742 LSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPN 801
++ +V+P+ D+E +I I GRHPV++TI + FV ND ++ E IITGPN
Sbjct: 566 VAETNKYVKPIV--DYED-RIVIKEGRHPVVETISDEGFVANDIDIGPENP-IMIITGPN 621
Query: 802 MGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNE 861
M GKS Y+RQVALI +MAQVG FVPAS A + ++D I+TR+GASD I G+STF+ E++E
Sbjct: 622 MAGKSTYMRQVALIVLMAQVGCFVPASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMSE 681
Query: 862 ASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIK 921
+ IL + T++SL+I+DE+GRGTST+DG++IA A ++Y+ E K LF THY ++ ++
Sbjct: 682 VANILHSATSKSLIILDEVGRGTSTYDGMSIAQAVIEYIHEKIKAKTLFATHYHELTKLE 741
Query: 922 TKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPS 981
K G V ++VS ++ + D D+ +L+K+VPG S+ S+G +V++LA LP S
Sbjct: 742 GKLRG-VRNFNVS----------VEERED-DIIFLHKIVPGGSDRSYGIQVSKLAGLPYS 789
Query: 982 CISRATVIAAKLE 994
I RA I LE
Sbjct: 790 IIERAKEILEALE 802
>gi|330800615|ref|XP_003288330.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
gi|325081628|gb|EGC35137.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
Length = 979
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 256/957 (26%), Positives = 437/957 (45%), Gaps = 132/957 (13%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL P+S T K++P E+Q ++K+KY D ++ + G + + DA++
Sbjct: 78 PDYDPRTLQ---IPASCLT---KFSPFERQFWDIKSKYYDTVVFFKKGKFYELYENDADI 131
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA-AIKAHGPGKAG 184
++L + N +P +L+N G+KV V Q ET+ + K G
Sbjct: 132 GHQILHLKMTDRVNMRMVGVPESAFTHWASKLINLGYKVAKVDQMETSIGMNKRQNEKGG 191
Query: 185 P------FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFG 238
R L+++ T TL + S YL+ + +D+
Sbjct: 192 RNKKDSIIQRELTSILTAGTLLDESMIS------DKTSTYLMAIKEDE------------ 233
Query: 239 DGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQT---E 294
+ + GV V++S G+ +D R E +LL + P E++ + +S +T
Sbjct: 234 --YSNKYGVCFVDVSIGEFFLCSIDDDENRMQFETLLLQMMPKEVVYEKGAISAKTMSIM 291
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
K +LA P N R+ D +TL+ D +PE
Sbjct: 292 KRVLATVKPVMNARLSLEYWD------------------PSETLNRVNDSCGRIPESLKE 333
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGL-ERIMCLG--ASFRSLSGSMEMTLSANTLQ 411
M L + +L + +L + ++++ G F SL + L L
Sbjct: 334 -------MKNETLLICSLGGCLSYLSDIKIAQQVLEQGRFKRFNSLDVGNSLILDGQCLV 386
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
LE+ N+++G+ GTL +M+ +T +G RL R+W+ PL ++ I R A+
Sbjct: 387 NLEIFNNSTDGTTEGTLFKLMDRCVTSFGKRLFRQWICRPLANKERIVDRQRAI------ 440
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
+H N D L V++ L + PD++R + RI ++ ++
Sbjct: 441 -----------EHLRDNPDH----------LQKVISILTKIPDLERMLARIRAGSSKIAD 479
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
I+V+ +L++ E E+ +S P ++ + ++T
Sbjct: 480 LISVLNHFEAIHSKLEEFEKKMEDFEQEQINGNYSGY----------PNLL----RYITT 525
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSV 651
+ + + D + I S G F E +K +Q ++ L+ + + RN+EF +
Sbjct: 526 IKESFKVEQDKI---IPSKGLFKEFDECQKKIQQIEQSLEEHLTEQKTYFSCRNIEFKHM 582
Query: 652 SGITHLIELPAN----FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRA 707
+ IE+P + K+P N+ + TK RYH+P ++ L L +EL ++ +
Sbjct: 583 GKEIYQIEVPVSALNRAKLPKNYQLKSKTKAACRYHTPFIIETLPSLLEERDELEVLSKE 642
Query: 708 AWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNK--NFVRPVFVDDHEPVQ---- 761
F Y+ F AVQ LA LDCL +L +S RP+FV P
Sbjct: 643 VSKKIQANFSVYFNHFSKAVQRLAQLDCLLSLFKVSCQSGIQMCRPIFVSKI-PTNNGGF 701
Query: 762 IHICSGRHPVLDTILLDNFVPNDTNLHAERE--YCQIITGPNMGGKSCYIRQVALIGIMA 819
+ + RHP + + D+F+PND +L+ E ++TGPNMGGKS +RQ ++ IMA
Sbjct: 702 LDVRDMRHPCIYSKAGDDFIPNDLSLNVENSPPSILVLTGPNMGGKSTLLRQACILVIMA 761
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q+G FV ASS E+ ++D I+TR+GA+D+I G+STF+ EL E +L+ T +SLVI+DE
Sbjct: 762 QMGCFVSASSCEMSIVDRIFTRLGANDNILAGQSTFMVELQETCSVLKYATNRSLVILDE 821
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
LGRGTST DG +IAY+ L+Y+ ++ K + +F THY +A ++ + T Y+T
Sbjct: 822 LGRGTSTFDGYSIAYSVLNYITKNLKSLCIFATHYQSLA-MEPSIRNEIST---GYMTCQ 877
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ ++ V +LYK+ G+ + S+G VA +A LP +++A + ++E E
Sbjct: 878 V------DEEEKRVIFLYKLAKGICQKSYGLHVAAMAGLPKEIVAKAEKKSEQMEKE 928
>gi|336273106|ref|XP_003351308.1| MSH6 protein [Sordaria macrospora k-hell]
gi|380092828|emb|CCC09581.1| putative MSH6 protein [Sordaria macrospora k-hell]
Length = 1230
Score = 326 bits (836), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 280/1017 (27%), Positives = 446/1017 (43%), Gaps = 145/1017 (14%)
Query: 6 QQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKK 65
Q SR AP++ T+SS+ + P+ + P + A R P
Sbjct: 276 QPAESRSVAPRT-APTSSSAKTKPKAHTREPEQRYPWLADIQDANRN---------RPGH 325
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P ++ P+ Q ++P E Q E+K D ++ + G + + DA +
Sbjct: 326 PDYDPGSVYVPPSAWRQ------FSPFETQYWEIKKNLWDTVVFFKKGKFYELYENDATI 379
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP 185
++ + N +P L + V + V G+KV V Q E+A
Sbjct: 380 GHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFVAKGYKVARVDQMESA------------ 427
Query: 186 FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDDGNV--GKIRNGVFGDGF 241
G+ + TKA + A+ + E C LV ++ DD V I+ V D
Sbjct: 428 LGKEMRERDTKA--KKADKIIRRELACILTGGTLVDGSMLQDDNAVYCAAIKESVIDD-- 483
Query: 242 DVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAY 300
G+ V+ +TG EF D + E + SP EL+L + LS + ++L
Sbjct: 484 KPAFGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLSTKALRILKNN 543
Query: 301 AGP---------------ASNVRVECASRDCFIGGGALAEVM--SLYENMGEDTLSNNED 343
P A R E F+ G EV L E G+D L
Sbjct: 544 TAPTTIWNYLKMGTEFWEADTTRRELDCSGYFVSGEGQDEVWPEKLKEARGKDLL----- 598
Query: 344 QNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGS 400
+ AL ++L+ +ER ++ G A + + +
Sbjct: 599 -------------------------MSALGALTQYLRMLKIERNLLSQGNFAWYNPIHRN 633
Query: 401 MEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISA 460
+ L +L LE+ N +NG GTL H++N +T +G RL R+WV HPLC+ ++
Sbjct: 634 GTLILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNE 693
Query: 461 RLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGIT 520
RLDAV D N D + E QF SS ++ + D++R I+
Sbjct: 694 RLDAV-------------------DMLNDDRSFQE-QF----SSQMSKMA---DLERLIS 726
Query: 521 RIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPA 580
RI P +F+ V++ + ++ L G + L+ RLI AS P
Sbjct: 727 RIHAGACKPGDFVKVLEGFERIDRTMELLEAFGG----------GNGLVDRLI--ASMPN 774
Query: 581 VIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQ 640
+ + +++ A LL I G + R+++ + K EL L+ +
Sbjct: 775 LKEPLGYWKTAFDRKRARDDKLL---IPEQGIVEDFDRSQEELDRIKGELQELLERQKTA 831
Query: 641 LGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
L + +F V + IE+P KVP W ++++T RY+ E+ + +L A E
Sbjct: 832 LRCKTAKFTDVGKEVYQIEVPKTVKVPPKWRQMSATSAVKRYYFKELEDLVRELQEAEET 891
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHE 758
+ + + F K F Y + A++ ++ LDCL +LA S + RPVFVDD
Sbjct: 892 HSQIVKEVASKFFKRFDLDYETWLQAIRIISQLDCLISLAKASSALGQPCCRPVFVDDER 951
Query: 759 PVQIHICSGRHP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
V + RHP +L+T+ D+F+PND L + ++TG N GKS +R + I
Sbjct: 952 TV-VEFNELRHPCMLNTV--DDFIPNDIKLGGDEANIDLLTGANAAGKSTILRMSCIAVI 1008
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MAQ+G +VPA SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+
Sbjct: 1009 MAQIGCYVPAMSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVIL 1068
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
DELGRGTS++DGVA+A A L ++ H C+ F THY +A T+F +
Sbjct: 1069 DELGRGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLA---TEFENH------PEIR 1119
Query: 938 SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ ++ +D ++ + +T+LYK+ GV+E SFG A + +P I R+ V A + E
Sbjct: 1120 AKRMQIEVDEENKR-ITFLYKLEDGVAEGSFGMHCAAMCGIPDKVIRRSEVAAKEWE 1175
>gi|340966746|gb|EGS22253.1| DNA mismatch repair protein msh6-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1238
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 264/939 (28%), Positives = 427/939 (45%), Gaps = 94/939 (10%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P TL IP PS++ + ++P E+Q E+K D ++ + G + + D
Sbjct: 334 PGHPDYDPSTLY-IP-PSAE----RNFSPFEKQYWEIKKNLWDTVVFFKKGKFYELYEND 387
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGK 182
A + ++ + N +P L++ + + V G+KV V Q E+
Sbjct: 388 ATIGHQLFDLKLTDRVNMRMVGVPEGSLDMWINQFVAKGYKVARVDQMESLL-------- 439
Query: 183 AGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDD--GNVGKIRNGVFG 238
G + ++ + V E C + LV ++ DD I+ +
Sbjct: 440 ------GKEMRERDSNVKKVDKVIRRELTCILTAGTLVEGSMLQDDMATYCAAIKEVMID 493
Query: 239 DGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKML 297
D GV V+ +TG EF D + E + +SP ELLL + LS + ++L
Sbjct: 494 DK--PSFGVAFVDAATGQFWLSEFEDDVELTRFETFVAQISPRELLLEKSRLSTKALRIL 551
Query: 298 LAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA 357
P + + + E+ ED D+ ++ ++ SA
Sbjct: 552 KGNTSPTTIWNYLKPGTEFWDADMTRRELECSDYFKAEDGKDKWPDKLCEMKDKDLAMSA 611
Query: 358 IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR 417
+ G+ + ++ L L L Q ER + + + + L TL LE+
Sbjct: 612 LGGLTHY----LRFLKLDSSLLSQGNFER-------YNPIHRNGTLILDGQTLINLEIFA 660
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N +NG GTL +++N +T +G RL R+WV HPLC+ I+ RLDAV +
Sbjct: 661 NTANGGPEGTLHNLLNRCITPFGKRLFRQWVCHPLCNIQKINERLDAVEML--------- 711
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
N+D + IL + + + PD++R I+RI P +F+ V++
Sbjct: 712 ----------NADQS--------ILRQFTSQMAKMPDLERLISRIHAGACRPDDFVRVLE 753
Query: 538 AILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA 597
+ L G + + L+ RLI A+ P + A + +K+ A
Sbjct: 754 GFEQIDYTMSLL---GAF-------AGGNGLVDRLI--AAMPNLKEPLAYWENAFDKKKA 801
Query: 598 DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL 657
+ + I G + R ++ K+EL+SL+ + L + L+F V +
Sbjct: 802 KEE---KVFIPERGVDEDFDRTADEIERIKDELNSLLEKQKAALKCKTLKFTDVGKEIYQ 858
Query: 658 IELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
IE+P + KVP +W ++++T RY+ E+ + +L A E + V + +F K+F
Sbjct: 859 IEVPKSVKVPSSWRQMSATSSVKRYYFRELENLIRELQEAEEIHSQVTKDVASNFFKKFD 918
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSGRHPVLDTI 775
Y + A++ +A LDCL +LA S RPVFVDD V I RHP +
Sbjct: 919 ANYDIWLQAIRIIAQLDCLISLAKSSSALGVPSCRPVFVDDERSV-IEFKELRHPCMINT 977
Query: 776 LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
+ D F+PND L + ++TG N GKS +R + IMAQ+G FVPA SA L +
Sbjct: 978 VAD-FIPNDIKLGGDEAKINLLTGANAAGKSTILRMTCIAVIMAQIGCFVPAESARLTPV 1036
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGVA+A A
Sbjct: 1037 DRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQA 1096
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
L ++ H C+ F THY +A +F H + + ++ +D K ++ VT+
Sbjct: 1097 VLHHVASHIGCVGFFATHYHSLA---AEFA------HHPEVRARRMQIAVDEK-ERRVTF 1146
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
LYK+ GV+E SFG A + +P + RA V A + E
Sbjct: 1147 LYKLEDGVAEGSFGMHCASMCGIPKKVVDRAEVAAKEWE 1185
>gi|213406337|ref|XP_002173940.1| DNA mismatch repair protein msh6 [Schizosaccharomyces japonicus
yFS275]
gi|212001987|gb|EEB07647.1| DNA mismatch repair protein msh6 [Schizosaccharomyces japonicus
yFS275]
Length = 1178
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 256/946 (27%), Positives = 430/946 (45%), Gaps = 103/946 (10%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P TL IP PS+ + + P E+Q E+K D ++ + G + + D
Sbjct: 277 PTDEDYDPRTLY-IP-PSAWAS----FKPFEKQYWEIKKNLMDTVVFFQKGKFYELYEND 330
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGK 182
A + +V + N IP + + G+++ V Q ETA K K
Sbjct: 331 AAIGHQVFALKLTDRVNMKMVGIPEATFEYWAAQFIAKGYRIARVDQLETALGKEMKDRK 390
Query: 183 AGP-----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVF 237
RGL+ + T TL E + + + + N +G
Sbjct: 391 NSKREEKVVQRGLTQVLTSGTL-------VDESMLTSDMSTYCMALKEAPNPQSRADGPL 443
Query: 238 GDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKM 296
LGV V+ +TG V EF D R+ L+ +L + P ELLL + +S++T +
Sbjct: 444 -------LGVCFVDTATGIVRACEFQDDISRTKLDTLLTQIRPRELLLEKSGISQKTMRT 496
Query: 297 L---LAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 353
+ L+ + N++ E + E + D++ ++P+
Sbjct: 497 IKNGLSASSTIHNIK-------------PYNEFWDQERTVREFDSCDFFDEHKEMPD--- 540
Query: 354 HRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT---LSANTL 410
A+ +++ LA A+ + +L+Q L++ + +F S + T L+ TL
Sbjct: 541 ---ALRNVLDKNPLAASAVGALVWYLRQLKLDKDIFSMGNFHIYDASQQSTSLLLNGQTL 597
Query: 411 QQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE 470
+ LE+ N+ +G E GTL +M +T +G RL W+ HPL I+ RLD V + +
Sbjct: 598 KNLEIFNNSFDGGEEGTLFRLMCRCVTPFGKRLFHSWMNHPLRSPEQINGRLDVVELLLD 657
Query: 471 SMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPS 530
+ + ++L L + PD++R I+R+ P
Sbjct: 658 NPN---------------------------LRDAILGILHKLPDLERMISRVHASRCKPI 690
Query: 531 EFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLS 590
+F+ +++ + +L D K T+ +++R+ AS +A
Sbjct: 691 DFLRILEGFKRIDTGIHELKEDFGTLMKGTA---LERIVERMPDMASELDSWSRAFSW-- 745
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
A D+G + + G E ++ + ++L L+N +K+L +L F
Sbjct: 746 ---SRARDEG----VFVPEPGFEPEYDESKTHQNALIDDLHELLNRYKKELKCSSLTFKD 798
Query: 651 VSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ + +E+P + KVP++W K++ TKK RY++ E+ + +L + E + D
Sbjct: 799 IGKEVYQVEVPVDVKVPVSWCKMSGTKKFNRYYTDELRKKIKKLLESQETHFAIEARMQD 858
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLH--ALATLSRNKNFVRPVFVDDHEPVQIHICSGR 768
F F Y+++ ++A+A++DCL+ ALA+ + + RP +D E ++ R
Sbjct: 859 KFYARFDEKYSDWVRMIKAVASMDCLYSLALASAALGEPCCRPEILD-QEQSEVTFEELR 917
Query: 769 HPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
HP + T+ FVPND L ++TGPNM GKS +RQ L IMAQ+G +VPA
Sbjct: 918 HPCVSTLTAGTFVPNDVQLGGMSANMIVLTGPNMAGKSTLLRQTCLAVIMAQLGCYVPAK 977
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
A L +D I+TR+GA+D I RSTF+ EL+E IL T ++LVI+DELGRGTST+D
Sbjct: 978 HARLTPMDSIHTRLGANDDIMSSRSTFMVELSETKKILDESTPRTLVILDELGRGTSTYD 1037
Query: 889 GVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
G AIAYA L +L+ + C+ F THY + T F H L ++ +D +
Sbjct: 1038 GQAIAYAVLHHLVSNIGCLGFFSTHYQSLC---TDFV------HHKQLRMMQMSALVD-E 1087
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ + VT+LYK+V GV S+G VA +A +P + A + +LE
Sbjct: 1088 AGRRVTFLYKLVDGVCSKSYGMNVASMASVPEEVVQVAETKSLELE 1133
>gi|426195177|gb|EKV45107.1| hypothetical protein AGABI2DRAFT_207943 [Agaricus bisporus var.
bisporus H97]
Length = 1263
Score = 323 bits (827), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 272/966 (28%), Positives = 438/966 (45%), Gaps = 103/966 (10%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
K P +P P TL+ PSS K++TP E+Q E+K + D +L + G F +
Sbjct: 314 KRPGEPGYDPRTLH---IPSSAW---KEFTPFEKQFWEIKQNHYDTVLFFQKGKFFELYE 367
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA---AIKA 177
+DA + + + +P L+ + + G+KVG V Q+ETA ++
Sbjct: 368 DDARIGHQEFDLKLTSRVKMSMVGVPEMSLDFWTAKFLGKGYKVGRVDQSETALGAEMRN 427
Query: 178 HGPGKAGPFG--------RGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNV 229
GKA R L+ +YT TL E + + D+ G+
Sbjct: 428 KSKGKASEDKAKDKIVRRRELNKVYTNGTLVDPE----------------LLIDDNAGHC 471
Query: 230 GKIRNGVFGDGFDV--RLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ 287
I DG D+ + G+ ++ ST F D R+ LE ++ + P ELL +
Sbjct: 472 VAITEEPSEDGKDLQNKFGICVLDCSTSQFNLSAFEDDVCRTKLETLMRQIRPKELLFKK 531
Query: 288 -PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQ-N 345
LS T +ML P + + + + F + ++ +L+ ED ++ +D
Sbjct: 532 GSLSVSTTRMLKMIL-PTNVLWTSLRTVEGFDYDQTMEQLKTLFPPGDEDMEADGDDALP 590
Query: 346 MDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSME 402
VPE +I + + P A+++L I +L+Q +++ + +F +
Sbjct: 591 ASVPE------SIREMASYPK-AIESLGCMIWYLRQLNIDKEIISMKNFNVYDPMKRGQG 643
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
+TL +L LE+L NN G+E G+LL ++N +T +G RL R W+ PL + I+ARL
Sbjct: 644 LTLEGQSLAHLEILINNE-GTEDGSLLKLLNRCITSFGKRLFRIWLCMPLRNVVDINARL 702
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV +I + P F + L PD++R ++RI
Sbjct: 703 DAVEDI------------------------MNHPTFEADFVEIAKGL---PDLERIVSRI 735
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
+F+ V+ + + L +L + E SKT+ L L +P +I
Sbjct: 736 HANNCKIKDFLKVLASFRKLSRGLNKL---ADESEGFKSKTI-------LGLLRGAPNLI 785
Query: 583 GKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
K + + + G + ++ G+ E + + +L+ ++ +G
Sbjct: 786 -PHVKHIEEMFQRPDPSGKASDELLPQKGKDEEYDAIVAEINGVEGKLEEALSELEDHVG 844
Query: 643 MRNLEFMSVSG--ITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
+ + S +G +L+E K P W K + TK RY P + + + QL A E
Sbjct: 845 FKLTYWHSATGHKDIYLVETTVAKKAPSTWTKHSGTKAKNRYVVPSLQSKIRQLKEAREN 904
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDD-H 757
T ++ EF + + +++ A LDCL +LA S RP FV++ H
Sbjct: 905 RTTAIKSFKSRLFAEFDQDRSVWLRSIRVFAELDCLFSLAKSSTVIGSPSCRPEFVENAH 964
Query: 758 EPVQIHICSGRHPVLD-TILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIG 816
+ RHP+L L NF+ ND L + ++TGPNM GKS +R A+
Sbjct: 965 GSTFVDFEELRHPILCLNTNLKNFIANDVKLGGDVGKVALLTGPNMAGKSTLMRMTAIGV 1024
Query: 817 IMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVI 876
IMAQ+G FVPAS A L +D I TRMGA D++ STF EL+E S ILR T +SLVI
Sbjct: 1025 IMAQLGMFVPASKARLSPVDSIITRMGAYDNMFAHASTFKVELDECSKILREATPRSLVI 1084
Query: 877 VDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL 936
+DELGRGTST DG+AIA A L L H + F THY + D + ++ H+S L
Sbjct: 1085 LDELGRGTSTFDGMAIAGAVLHQLATHTLPLTFFATHYGSLTDDFAQHP-NIRNMHMSTL 1143
Query: 937 TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
D K +++ +LYK++ GV+ESSFG VA LA +P + RA +++ + +
Sbjct: 1144 VD-------DEK--KELVFLYKLIDGVAESSFGTHVANLAGVPFEVVERADIVSKQFAKQ 1194
Query: 997 VSSRVQ 1002
+++
Sbjct: 1195 FKEKLE 1200
>gi|121707076|ref|XP_001271724.1| DNA mismatch repair protein Msh6, putative [Aspergillus clavatus NRRL
1]
gi|119399872|gb|EAW10298.1| DNA mismatch repair protein Msh6, putative [Aspergillus clavatus NRRL
1]
Length = 1212
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 273/968 (28%), Positives = 448/968 (46%), Gaps = 120/968 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P T+ P S K++P E+Q E+K K+ D ++ + G + + D
Sbjct: 296 PNHPDYDPRTIYIPPLAWS------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 349
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA---AIKAHG 179
A + ++ + N +P L+ + V GFK+ V Q+E+A ++
Sbjct: 350 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRERD 409
Query: 180 PGKAGP-----FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKI 232
KAG R LS + T TL V G +D S Y CV I
Sbjct: 410 GKKAGGKEDKIIKRELSCVLTAGTL-----VEGSMLQDDM---STY--CVA--------I 451
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSK 291
+ + D G+ V+ +TG EF D + E + P ELLL + +S
Sbjct: 452 KEAIIED--HPAFGIAFVDTATGQFSLSEFGDDADMTKFETFVAQTRPQELLLEKSTIST 509
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEV-MSLYENMGEDTLSNNEDQNMDV-P 349
+ ++L GP + + G E +++ E D + +D N+ P
Sbjct: 510 KALRILKNNTGPTTIW-------NHLKPGKEFWEADITVKELDASDYFVSQDDDNLQAWP 562
Query: 350 EQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLS 406
E A E LA+ A +++L+ L+R ++ +G + + + + + L
Sbjct: 563 ETLREARAKE-------LAMSAFGALVQYLRMLKLDRDLITIGNFSWYDPIRKTSNLVLD 615
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TL +E+ N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 616 GQTLINMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDAV- 674
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
D N+D +I + QF SS LT + PD++R I+RI
Sbjct: 675 ------------------DALNADSSIRD-QF----SSQLTKM---PDLERLISRIHAAN 708
Query: 527 ATPSEFIAVMQA---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIG 583
+F+ V++ I Y L+ GE ++ +LI +
Sbjct: 709 CKAQDFVRVLEGFEQIEYTISLLKDTGSSGE------------GVIGQLINAMPDLGSLL 756
Query: 584 KAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+ K NK A + G +++ G + ++++++ +LD+L+ R++LG
Sbjct: 757 EYWKTAFDRNK-AKENG----ILVPKLGVEEDFDNSQESIEQLHRDLDNLLKRVRRELGS 811
Query: 644 RNLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
+ + + +E+P K VP NW ++++TK+ RY+ PE+ + + +L E +
Sbjct: 812 TAICYRDNGKEIYQLEVPVKVKNVPKNWDQMSATKQVKRYYFPELRSLIRKLQETQETHS 871
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPV 760
+ + F F +Y + AAV+ ++ LDCL +LA S + RPVFV+D V
Sbjct: 872 HIVKEVAGRFYARFDEHYTTWLAAVRIVSQLDCLISLAKASSSLGHPSCRPVFVEDGRSV 931
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
+ RHP L + + D F+PND L ER ++TG N GKS +R + IMAQ
Sbjct: 932 -LEFEELRHPCLLSSVED-FIPNDVRLGGERPNINLLTGANAAGKSTVLRMSCVAVIMAQ 989
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G ++P SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DEL
Sbjct: 990 IGCYLPCKSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1049
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTS++DGVA+A A L ++ H M F THY +A +F G +T +
Sbjct: 1050 GRGTSSYDGVAVAQAVLHHISSHIGAMGFFATHYHSLA---AEFEGH------PEITPKR 1100
Query: 941 VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ +D + ++ +T+LYK+ GV+E SFG A + +P I RA V A + E +SR
Sbjct: 1101 MRIHVDDQ-ERRITFLYKLEDGVAEGSFGMHCASMCGIPNKIIERAEVAAKQWEH--TSR 1157
Query: 1001 VQNRSAKR 1008
++ +R
Sbjct: 1158 LKESLERR 1165
>gi|336467632|gb|EGO55796.1| DNA mismatch repair protein msh6 [Neurospora tetrasperma FGSC 2508]
Length = 1235
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 278/1012 (27%), Positives = 443/1012 (43%), Gaps = 145/1012 (14%)
Query: 11 RFFAPKSNQTTASSSASSPRPPQQT--PPPKIAATVSFSPAKRKVVSSLFPPKTPKKPKL 68
R P+S QT SA+ P+P T P + A R P P
Sbjct: 286 RSATPRSAQT---PSATKPKPKAHTREPEERYPWLADIQDANRN---------RPGHPDY 333
Query: 69 SPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAK 128
P ++ P+ Q ++P E Q E+K D ++ + G + + DA + +
Sbjct: 334 DPGSVYVPPSAWRQ------FSPFETQYWEIKKNLWDTVVFFKKGKFYELYENDATIGHQ 387
Query: 129 VLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
+ + N +P L++ V + V G+KV V Q E+A G+
Sbjct: 388 LFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESA------------LGK 435
Query: 189 GLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDDGNV--GKIRNGVFGDGFDVR 244
+ TKA + A+ + E C LV ++ DD V I+ V D
Sbjct: 436 EMRERDTKA--KKADKIIRRELTCILTGGTLVDGSMLQDDNAVYCAAIKESVVDDK--PA 491
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKML------ 297
G+ V+ +TG EF D + E + SP EL+L + LS + ++L
Sbjct: 492 FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLSTKALRILKNNTSP 551
Query: 298 ---LAYAGPASNVRVECASR---DC---FIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
Y P + +R DC F+ G EV D
Sbjct: 552 TTIWNYLKPGTEFWDADVARREFDCSGYFVSGEGQEEVWPAKLKEARDK----------- 600
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTL 405
DL + AL ++L+ LER ++ G A + + + + L
Sbjct: 601 -----------------DLLMSALGALTQYLRMLKLERNLLSQGNFAWYNPIHRNGTLIL 643
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
+L LE+ N +NG GTL H++N +T +G RL R+WV HPLC+ ++ RLDAV
Sbjct: 644 DGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNERLDAV 703
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
D N D ++ E QF + + + PD++R I+RI
Sbjct: 704 -------------------DMLNDDHSLRE-QFS-------SQMSKMPDLERLISRIHAG 736
Query: 526 TATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
P +F+ V++ + ++ L G + L+ RLI AS P +
Sbjct: 737 ACRPEDFVKVLEGFEQIDRTMELLESYGG----------GNGLVDRLI--ASMPDLKEPL 784
Query: 586 AKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
+ +++ A LL I G + R++ + K EL L+ + L +
Sbjct: 785 GYWKTAFDRKRARDDKLL---IPEPGIEEDFDRSQAELDRIKGELQELLERQKTALRCKT 841
Query: 646 LEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+F V + IE+P KVP W ++++T RY+ E+ + +L A E + +
Sbjct: 842 AKFTDVGKEVYQIEVPKTVKVPPKWRQMSATSAVKRYYFKELQDLVRELQEAEETHSQIV 901
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIH 763
+ F K F Y + A++ ++ LDCL +LA S + RP+FV+D V +
Sbjct: 902 KEVASRFFKRFDLDYETWLQAIRIISQLDCLISLAKASAALGQPCCRPLFVNDERTV-VE 960
Query: 764 ICSGRHP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVG 822
RHP +L+T+ D+F+PND L + ++TG N GKS +R + IMAQ+G
Sbjct: 961 FNELRHPCMLNTV--DDFIPNDIKLGGDEANISLLTGANAAGKSTILRMSCIAVIMAQIG 1018
Query: 823 SFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGR 882
+VPA SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGR
Sbjct: 1019 CYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1078
Query: 883 GTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVM 942
GTS++DGVA+A A L ++ H C+ F THY +A T+F + + ++
Sbjct: 1079 GTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLA---TEFENH------PEIRARRMQ 1129
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+D ++ + +T+LYK+ GV+E SFG A + +P I R+ V A + E
Sbjct: 1130 IAVDEENKR-ITFLYKLEDGVAEGSFGMHCAAMCGIPDKVIRRSEVAAKEWE 1180
>gi|164423588|ref|XP_959678.2| DNA mismatch repair protein msh6 [Neurospora crassa OR74A]
gi|157070157|gb|EAA30442.2| DNA mismatch repair protein msh6 [Neurospora crassa OR74A]
Length = 1237
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 279/1012 (27%), Positives = 443/1012 (43%), Gaps = 145/1012 (14%)
Query: 11 RFFAPKSNQTTASSSASSPRPPQQT--PPPKIAATVSFSPAKRKVVSSLFPPKTPKKPKL 68
R AP+S QT SA+ P+ T P + A R P P
Sbjct: 288 RSAAPRSAQT---PSATKPKTKAHTREPEERYPWLADIQDANRN---------RPGHPDY 335
Query: 69 SPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAK 128
P ++ P+ Q ++P E Q E+K D ++ + G + + DA + +
Sbjct: 336 DPGSVYVPPSAWRQ------FSPFETQYWEIKKNLWDTVVFFKKGKFYELYENDATIGHQ 389
Query: 129 VLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
+ + N +P L++ V + V G+KV V Q E+A G+
Sbjct: 390 LFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESA------------LGK 437
Query: 189 GLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDDGNV--GKIRNGVFGDGFDVR 244
+ TKA + A+ + E C LV ++ DD V I+ V D
Sbjct: 438 EMRERDTKA--KKADKIIRRELTCILTGGTLVDGSMLQDDNAVYCAAIKESVVDDK--PA 493
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKML------ 297
G+ V+ +TG EF D + E + SP EL+L + LS + ++L
Sbjct: 494 FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLSTKALRILKNNTSP 553
Query: 298 ---LAYAGPASNVRVECASR---DC---FIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
Y P + +R DC F+ G EV D
Sbjct: 554 TTIWNYLKPGTEFWDADVARRELDCSGYFVSGEGQEEVWPAKLKEARDK----------- 602
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTL 405
DL + AL ++L+ LER ++ G A + + + + L
Sbjct: 603 -----------------DLLMSALGALTQYLRMLKLERNLLSQGNFAWYNPIHRNGTLIL 645
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
+L LE+ N +NG GTL H++N +T +G RL R+WV HPLC+ ++ RLDAV
Sbjct: 646 DGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNERLDAV 705
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
D N D ++ E QF + + + PD++R I+RI
Sbjct: 706 -------------------DMLNDDHSLRE-QFS-------SQMSKMPDLERLISRIHAG 738
Query: 526 TATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
P +F+ V++ + ++ L G + L+ RLI AS P +
Sbjct: 739 ACRPEDFVKVLEGFEQIDRTMELLESYGG----------GNGLVDRLI--ASMPDLKEPL 786
Query: 586 AKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
+ +++ A LL I G + R++ + K EL L+ + L +
Sbjct: 787 GYWKTAFDRKRARDDKLL---IPEPGIEEDFDRSQAELDRIKGELQELLERQKTALRCKT 843
Query: 646 LEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+F V + IE+P KVP W ++++T RY+ E+ + +L A E + +
Sbjct: 844 AKFTDVGKEVYQIEVPKTVKVPPKWRQMSATSAVKRYYFKELEDLVRELQEAEETHSQIV 903
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIH 763
+ F K F Y + A++ ++ LDCL +LA S + RPVFV+D V +
Sbjct: 904 KEVASRFFKRFDLDYETWLQAIRIISQLDCLISLAKASSALGQPCCRPVFVNDERTV-VE 962
Query: 764 ICSGRHP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVG 822
RHP +L+T+ D+F+PND L + ++TG N GKS +R + IMAQ+G
Sbjct: 963 FNELRHPCMLNTV--DDFIPNDIKLGGDEANINLLTGANAAGKSTILRMSCIAVIMAQIG 1020
Query: 823 SFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGR 882
+VPA SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGR
Sbjct: 1021 CYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1080
Query: 883 GTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVM 942
GTS++DGVA+A A L ++ H C+ F THY +A T+F + + ++
Sbjct: 1081 GTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLA---TEFENH------PEIRARRMQ 1131
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+D ++ + +T+LYK+ GV+E SFG A + +P I R+ V A + E
Sbjct: 1132 IAVDEENKR-ITFLYKLEDGVAEGSFGMHCAAMCGIPDKVIRRSEVAAKEWE 1182
>gi|350287714|gb|EGZ68950.1| DNA mismatch repair protein msh6 [Neurospora tetrasperma FGSC 2509]
Length = 1243
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 278/1012 (27%), Positives = 443/1012 (43%), Gaps = 145/1012 (14%)
Query: 11 RFFAPKSNQTTASSSASSPRPPQQT--PPPKIAATVSFSPAKRKVVSSLFPPKTPKKPKL 68
R P+S QT SA+ P+P T P + A R P P
Sbjct: 294 RSATPRSAQT---PSATKPKPKAHTREPEERYPWLADIQDANRN---------RPGHPDY 341
Query: 69 SPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAK 128
P ++ P+ Q ++P E Q E+K D ++ + G + + DA + +
Sbjct: 342 DPGSVYVPPSAWRQ------FSPFETQYWEIKKNLWDTVVFFKKGKFYELYENDATIGHQ 395
Query: 129 VLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
+ + N +P L++ V + V G+KV V Q E+A G+
Sbjct: 396 LFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESA------------LGK 443
Query: 189 GLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDDGNV--GKIRNGVFGDGFDVR 244
+ TKA + A+ + E C LV ++ DD V I+ V D
Sbjct: 444 EMRERDTKA--KKADKIIRRELTCILTGGTLVDGSMLQDDNAVYCAAIKESVVDDK--PA 499
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKML------ 297
G+ V+ +TG EF D + E + SP EL+L + LS + ++L
Sbjct: 500 FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLSTKALRILKNNTSP 559
Query: 298 ---LAYAGPASNVRVECASR---DC---FIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
Y P + +R DC F+ G EV D
Sbjct: 560 TTIWNYLKPGTEFWDADVARREFDCSGYFVSGEGQEEVWPAKLKEARDK----------- 608
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTL 405
DL + AL ++L+ LER ++ G A + + + + L
Sbjct: 609 -----------------DLLMSALGALTQYLRMLKLERNLLSQGNFAWYNPIHRNGTLIL 651
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
+L LE+ N +NG GTL H++N +T +G RL R+WV HPLC+ ++ RLDAV
Sbjct: 652 DGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNERLDAV 711
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
D N D ++ E QF + + + PD++R I+RI
Sbjct: 712 -------------------DMLNDDHSLRE-QFS-------SQMSKMPDLERLISRIHAG 744
Query: 526 TATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
P +F+ V++ + ++ L G + L+ RLI AS P +
Sbjct: 745 ACRPEDFVKVLEGFEQIDRTMELLESYGG----------GNGLVDRLI--ASMPDLKEPL 792
Query: 586 AKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
+ +++ A LL I G + R++ + K EL L+ + L +
Sbjct: 793 GYWKTAFDRKRARDDKLL---IPEPGIEEDFDRSQAELDRIKGELQELLERQKTALRCKT 849
Query: 646 LEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+F V + IE+P KVP W ++++T RY+ E+ + +L A E + +
Sbjct: 850 AKFTDVGKEVYQIEVPKTVKVPPKWRQMSATSAVKRYYFKELQDLVRELQEAEETHSQIV 909
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIH 763
+ F K F Y + A++ ++ LDCL +LA S + RP+FV+D V +
Sbjct: 910 KEVASRFFKRFDLDYETWLQAIRIISQLDCLISLAKASAALGQPCCRPLFVNDERTV-VE 968
Query: 764 ICSGRHP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVG 822
RHP +L+T+ D+F+PND L + ++TG N GKS +R + IMAQ+G
Sbjct: 969 FNELRHPCMLNTV--DDFIPNDIKLGGDEANISLLTGANAAGKSTILRMSCIAVIMAQIG 1026
Query: 823 SFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGR 882
+VPA SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGR
Sbjct: 1027 CYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGR 1086
Query: 883 GTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVM 942
GTS++DGVA+A A L ++ H C+ F THY +A T+F + + ++
Sbjct: 1087 GTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLA---TEFENH------PEIRARRMQ 1137
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+D ++ + +T+LYK+ GV+E SFG A + +P I R+ V A + E
Sbjct: 1138 IAVDEENKR-ITFLYKLEDGVAEGSFGMHCAAMCGIPDKVIRRSEVAAKEWE 1188
>gi|443897710|dbj|GAC75049.1| mismatch repair ATPase MSH6 [Pseudozyma antarctica T-34]
Length = 2956
Score = 320 bits (820), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 284/970 (29%), Positives = 447/970 (46%), Gaps = 116/970 (11%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K +TP E+Q +K + D +L + G + + EDA + + + +P
Sbjct: 1646 KDFTPFEEQFWRIKQNHWDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVP 1705
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFG------RGLSALYTKATLE 200
++ + + G+KVG V QTETA K G+ G R L + T T+
Sbjct: 1706 EASFDIFAAKFLALGYKVGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIV 1765
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
A + + N + +D + G RNG GV ++ ST +
Sbjct: 1766 DAASLPD-------DLNSYCVSIKEDASAG--RNGPL-------FGVCTLDASTAEFNLT 1809
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
EF D R+ LE +L SL E+L + LS QT ++L + + + + +
Sbjct: 1810 EFEDDESRTRLETLLRSLRLKEVLHEKAGLSPQTLRVLRSTVPSTAQITMLKPGVEFLEP 1869
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD--LAVQALALTIR 377
L ++ +L+ N D + ++ E + EGI +M D A+ AL +
Sbjct: 1870 ETTLRKLNALF-NPDVDA-----EARVETLEPVDPALLPEGIESMVDRACAMSALGGMLC 1923
Query: 378 HLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
+L Q L+R +C +F L + L A +L L VL+N+ G+E GTL ++N
Sbjct: 1924 YLAQLNLDRDLCSSRNFNIFDPLKQDKCLVLDAQSLTHLNVLQND-EGTEEGTLHRLLNR 1982
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
+T +G RL + W+ PL + I AR DAV ++ + G E+ G+ T+
Sbjct: 1983 CVTPFGKRLFKIWLVAPLATADAIRARQDAVEDLLKYPGFGDEFETFGK--------TL- 2033
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--HID 552
PDI+R + R+ P +F AV++A+ K ++QL H D
Sbjct: 2034 ------------------PDIERIVPRVRAGKCRPRDFTAVLKALTRFEKSVRQLRAHCD 2075
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
G +A++ L+ S PAV A +L S+ + G + G
Sbjct: 2076 G----------FETAVISDLL--DSIPAVSPIARELQSSFR--MTEDGSFNPI----EGA 2117
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL-------IELPANFK 665
F RA A+ + +L+ I+ RKQL + + + HL IE+P + K
Sbjct: 2118 FEPYDRAEAAIAKVEAQLEHEIDSYRKQLKLTSAK----CAWKHLGTKDIFQIEVPVSTK 2173
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP NW K++ TK R++SP+V + + A E + S F F
Sbjct: 2174 VPANWTKLSGTKDRNRWYSPKVRDLVQDIKEARETRLAALKQFHQSLFASFSEQSDVFLQ 2233
Query: 726 AVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
AV+ +A +DCL +LA S + RP V+ HE + RHP + +D F+PN
Sbjct: 2234 AVKTVAEVDCLLSLAKSSYAIGEPSCRPELVE-HETALLEFEELRHPCIAGENVD-FIPN 2291
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D L + + I+TG NM GKS R A I+AQ+G VPA+SA L +D I +RMG
Sbjct: 2292 DIRLGGKNDEVVILTGGNMAGKSTTARTSATAVILAQLGCRVPAASARLSPVDRIASRMG 2351
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D I + STF+ E+ EAS I+ CT +SLVI+DELGRGTST DG AIA+A L +L+
Sbjct: 2352 ANDQIFRNNSTFMVEMLEASRIINECTPRSLVIMDELGRGTSTFDGQAIAFAVLHHLVSR 2411
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
+C+ F+THY +A ++ V H+ L D+K ++V + Y++V G+
Sbjct: 2412 TRCLTFFLTHYTNLAYDFDSYS-RVSNKHMQVLVD-------DAK--REVIFTYRLVDGI 2461
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQNRSAKRDL--------LVKL 1014
+ESS+G +VA LA +P RA ++ + +A +S+ + + L LVKL
Sbjct: 2462 AESSYGTQVAALAGVPHEICDRAAAVSKQFADATKASQAEKKGRAIPLALLSDFVHLVKL 2521
Query: 1015 SDQEQEAQEN 1024
+ QE A +
Sbjct: 2522 AKQEAPASSD 2531
>gi|393212242|gb|EJC97743.1| DNA mismatch repair protein Msh6 [Fomitiporia mediterranea MF3/22]
Length = 1254
Score = 320 bits (819), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 288/965 (29%), Positives = 438/965 (45%), Gaps = 114/965 (11%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P +P P TL IP + +T +TP E+Q E+K + D +L + G + +D
Sbjct: 329 PGEPGYDPRTLY-IPKSAWKT-----FTPFERQFWEIKANHYDTVLFFQKGKFLELYEDD 382
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------- 173
A + + + +P N + + G+KVG V Q ETA
Sbjct: 383 ARIGHREFDLKLTDRVKMCMVGVPEGHFNTWAAKFLAKGYKVGRVDQAETALGAEMRLAA 442
Query: 174 AIKAHGPGK-AGP--FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDD-GNV 229
K P K AG R L+ +YT TL AE +VDD G+
Sbjct: 443 DKKLDKPKKEAGDKIVRRELNKVYTNGTLVDAE-----------------LIVDDQAGHC 485
Query: 230 GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-P 288
IR + D GV ++ ST + F D R+ LE +L L P ELL +
Sbjct: 486 VSIRE-LDPDSDRGSFGVCVLDSSTSEFNLSAFGDDACRTKLETMLRQLRPKELLFTKGN 544
Query: 289 LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
LS T ++L A P S + + F + E+ +LY + GED D+
Sbjct: 545 LSVSTTRLLKAVL-PGSCIWTGLREVEGFGFKETMDELKNLYPD-GED----------DM 592
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTL 405
E N AI+ ++ + AV AL I +L+Q +++ + +F + + L
Sbjct: 593 EEGANIPDAIKEMLT-SETAVIALGAMIWYLRQLNIDKDILSMKNFNIYDPMKRGQGLVL 651
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
TL +EVL+N S G++ G+LL I+ +T +G RL R W+ PL + + I+ARLDAV
Sbjct: 652 DGQTLAHVEVLQN-SEGTDEGSLLRILQRCITPFGKRLFRIWLCVPLREVSAINARLDAV 710
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
++ I P F + + + + PD++R ++RI +
Sbjct: 711 QDL------------------------IDHPTFEHDFTQLAKGI---PDLERIVSRIHAK 743
Query: 526 TATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
++F+ V+ + L+ L E + S+ + S LL+ S+P +I
Sbjct: 744 NCKVNDFLKVLSSFKRLSNGLESL---SETADTFNSREI-SGLLR------SAPNLIPNI 793
Query: 586 AKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
K + ++ + DLL NG+ +Q +E LD+ + K+LG +
Sbjct: 794 -KHVESMFLQPEGGPDLLP----KNGKDETYDGIEGEIQEIEESLDAELKKLEKKLGCKL 848
Query: 646 LEFMSVSGIT--HLIELPANF-KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
+ S +G +L+E A+ VP NW + + TK R+ P++ A+ QL E T
Sbjct: 849 SYWHSATGTKDIYLVETKASVSNVPKNWIRQSKTKAVCRWQVPDLAQAIRQLKEERERRT 908
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA--TLSRNKNFVRPVFVD-DHEP 759
+ EF + A++ LA LDCL +LA +L+ + RP FV+ D
Sbjct: 909 AAIKDFKFRVFAEFDKDRDVWLRAIRTLAELDCLFSLAKSSLAIGEPACRPEFVEGDGAG 968
Query: 760 VQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMA 819
+ RHP + + DNF+PND L ++TGPNMGGKS +R A IMA
Sbjct: 969 ALLDFEELRHPTM-CLKADNFIPNDVKLGGGVGRVALLTGPNMGGKSTAMRMTAAGVIMA 1027
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q+G VPA A + +D I TRMGA D++ STF EL+E ILR T +SLVI+DE
Sbjct: 1028 QLGMLVPARRARISPVDAILTRMGAYDNMFSNASTFKVELDECCKILREATPRSLVILDE 1087
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
LGRGTST+DG+AIA A L L H + F THY + D F YH + H
Sbjct: 1088 LGRGTSTYDGMAIAGAVLHQLATHTLPLCFFATHYGSLTD---DF-----AYHPNIRNMH 1139
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
M + ++ +LYK+V GV+ SSFG VA LA +P + RA VI+ +
Sbjct: 1140 --MSTIIDDEKCELVFLYKLVEGVAASSFGTHVANLAGVPMDVVKRAEVISTDFARQFKE 1197
Query: 1000 RVQNR 1004
R++ +
Sbjct: 1198 RIEGK 1202
>gi|320581532|gb|EFW95752.1| Mismatch repair protein [Ogataea parapolymorpha DL-1]
Length = 827
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 240/797 (30%), Positives = 390/797 (48%), Gaps = 112/797 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----- 142
K TPLEQQ+ ELK ++ D LL I+VGYK++F+GEDA A+++L I F T
Sbjct: 99 KLTPLEQQIYELKMQHKDKLLAIQVGYKYKFYGEDARAASQILNIMYIPGRLFFTKSDDL 158
Query: 143 ------ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTK 196
SIP RL++H++RL+NAG+KV VV Q ETAAIK+ K F R +S +YT
Sbjct: 159 YDKLAYCSIPDVRLHIHLKRLLNAGYKVAVVDQNETAAIKSTTSSKNKLFERRISKVYTS 218
Query: 197 ATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
+T EDV G ++V + + + + +VAV++ + D
Sbjct: 219 STYIDNEDVISG-------GRFVVALTETKNKETTV------------ISLVAVDVYSAD 259
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYA----GPASNVRVECA 312
++Y EF D F+R+ LE L L P E LL +S++T+K L + A+++R E
Sbjct: 260 IIYDEFEDNFVRNELETRLYHLDPTEFLLIGEISRETQKALDLFKRHTRESATSLRSEVR 319
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
+ + + +V++ +N DQ D+ I +
Sbjct: 320 AAKTYT---QITDVLN----------ANLSDQAFDL------------ITKLAASVQGCF 354
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
A I +L +F L + L + S M L ANTL+ LE+ +N++NG EYG+LL +
Sbjct: 355 AELIEYLGEFELANVFDLVDKYTHFSSVHRCMVLDANTLRNLEIYKNSTNGQEYGSLLWM 414
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++HT T +G R L+RWV PL DR ++ R D+V I M +Y +SV
Sbjct: 415 LDHTNTQFGRRELKRWVGRPLTDREEVAKRADSVESI---MKNY---QSVA--------- 459
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE---FIAVMQAILYAGKQLQQ 548
+ S + L PD++ ++R+ + + + F+ M IL L
Sbjct: 460 ----------IESTVKLLRNCPDLEAALSRVHYGRSKRKDTYMFLKKMNEILQFYGDLPD 509
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA-DQGDLLNLMI 607
++ T+ +L + L ASS + LL V+ AA D ++
Sbjct: 510 TYVQ-------TNPSLRE-IFDDLKTAASSG--LKDFRNLLDMVHSPAAIDDTSPEHVTG 559
Query: 608 ISNGQFSE---VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
N F + + + + + +++L++ + RK +G + +++ + +L+E+ N
Sbjct: 560 YFNTNFFDYHLIQQHLENISQVEQQLEAELKDIRKIVGRPGMGYVTNNKEPYLVEV-RNT 618
Query: 665 KV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+V P +W K+N TK R+ +P Q+ E L C + F+K YY
Sbjct: 619 QVASLPKDWVKINGTKSVSRFRTPSGAALYRQIQYHTEMLQKECNECFTKFVKRIDEYYL 678
Query: 722 EFQAAVQALAALDCLHALATLSR-NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN- 779
+ ++ LA LD L +L+ S N+ + +PVFVD P I + + R+P+ + +
Sbjct: 679 DLNKTIRHLAVLDSLISLSAASSLNEGYTKPVFVD--SPC-IDVKNSRNPISENLKTSTR 735
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS-AELHVLDGI 838
++PND + +ITGPNMGGKS +IRQ+AL+ +MAQ+G ++PA + ++L + D I
Sbjct: 736 YIPNDFKMSDSEGRIALITGPNMGGKSSFIRQIALLVVMAQIGCYIPAEAGSKLSIFDSI 795
Query: 839 YTRMGASDSIQQGRSTF 855
+TRMGA D I +G STF
Sbjct: 796 HTRMGAQDDIIKGESTF 812
>gi|355704534|gb|AES02259.1| mutS-like protein 3 [Mustela putorius furo]
Length = 418
Score = 319 bits (817), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 244/385 (63%), Gaps = 11/385 (2%)
Query: 623 VQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTI 680
+Q +++ + RK L ++++++VSG +IE+ A +P +W KV STK
Sbjct: 2 IQEVTDKIQIHLQEIRKILKNSSIQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVS 61
Query: 681 RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA 740
R+HSP ++ L E+L + C A W FL+ F +Y AV LA +DC+ +LA
Sbjct: 62 RFHSPFIVENYRHLNQLREQLVLDCSAEWLGFLENFSEHYHSLCKAVHHLATVDCIFSLA 121
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIIT 798
+++ ++ RP E +I I +GRHPV+D +L D +VPN TNL + E IIT
Sbjct: 122 KVAKQGDYCRPTL---QEGRKIVIKNGRHPVIDMLLGEQDQYVPNSTNLSGDSERVMIIT 178
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +G+STF+EE
Sbjct: 179 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEE 238
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA 918
L + + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL++ + K + LFVTHYP +
Sbjct: 239 LTDTAEIIRQATSQSLVILDELGRGTSTHDGIAIAYATLEHFIRDVKSLTLFVTHYPPVC 298
Query: 919 DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD---VTYLYKVVPGVSESSFGFKVAQL 975
+++ + VG YH+ +L + DS +Q VT+LY++ G++ S+G VA+L
Sbjct: 299 ELEKSYLQQVGNYHMGFLITED-ESKEDSGEEQVPDFVTFLYQITRGIAARSYGLNVAKL 357
Query: 976 AQLPPSCISRATVIAAKLEAEVSSR 1000
A +P + +A + +LE V+ +
Sbjct: 358 ADVPGEILKKAASKSKELEGLVNMK 382
>gi|326437890|gb|EGD83460.1| hypothetical protein PTSG_04067 [Salpingoeca sp. ATCC 50818]
Length = 1327
Score = 318 bits (815), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 281/981 (28%), Positives = 444/981 (45%), Gaps = 136/981 (13%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+T P+ P +L IP PS K TP E+Q ++K + + +L + G + +
Sbjct: 399 RTEGHPEFDPTSLY-IP-PSGWA----KMTPFEKQYWDIKQHHWNTILFFKKGKFYELYE 452
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA---AIKA 177
DAE+ + + N A +P R + G+KV V + E A ++
Sbjct: 453 RDAEIGNREFQLKMTDRVNMCMAGVPEITFPDWAARFLAKGYKVARVDERENAIAKKMRE 512
Query: 178 HGPGKAGP--FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNG 235
GK GP R LSA+YT+ TL G+ G SN+++ + +D+
Sbjct: 513 TKTGKKGPKIIERKLSAVYTQGTLM-------GDFVIGDMSNFIMAIKEDE--------- 556
Query: 236 VFGDGFDVR-LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE 294
D R GV + +T + F D R+ E +++ + P EL+L +
Sbjct: 557 ------DTRTYGVCFADTATAEFNVCHFVDDAARTAFETLIVQVMPKELVL-------PK 603
Query: 295 KMLLAYAGPASNVRVECAS-RDCFIGGGALAEVMS-----LYENMGEDTLSNNEDQNMDV 348
K L S VRV C S R C +GG M D L V
Sbjct: 604 KSL-------SKVRVRCLSERPCLVGGEGRGTKGGRRFAFWSSQMTIDNLEKGTRARASV 656
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRS---LSGSMEMTL 405
R + ++ D A+ AL + + K L++ + +F S L + +
Sbjct: 657 DACSPER--LRAFLSK-DEAMSALGGLVSYFKTLLLDKSLLSQGTFFSYDPLHHGATLVI 713
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
TLQ L+VL N +G+ G+LL ++ T +G R+ RRW+ HPL N I+ R +AV
Sbjct: 714 DGQTLQNLDVLCNMQDGTTSGSLLELLCQCHTAFGKRMFRRWLCHPLRRVNDITERQNAV 773
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
++ E + D +++ LSS+L L PD++R ++R+
Sbjct: 774 VDLTEHV------------DLRDA------------LSSMLKPL---PDLERLLSRVHVG 806
Query: 526 TATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
S+ I+++ A + G+ V S L + A +
Sbjct: 807 NCKLSDLISLLDAFDA---------VSGQDEGCVGS------------LFPNLKAELKAI 845
Query: 586 AKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM-R 644
A + +A D+ + G E A +QS ++ L+ + R++ G +
Sbjct: 846 ANIFDRQEAKATDK------LTPKPGALPEYDVAVDQMQSIEKRLNEHLANVRREFGAGK 899
Query: 645 NLEFMSVSGITHLIELP---ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
+ F S ++ A KVP +W ++STK RYHSPE + + + A E +
Sbjct: 900 AISFWQPSAGRERYQIQVRVAMKKVPSSWKLMSSTKANKRYHSPEAVRLVAKWLEAEETI 959
Query: 702 TIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL--ATLSRNKNFVRPVFV----D 755
+ + + L + +F AAV AL+ LDCL +L A S RPVFV D
Sbjct: 960 SQFLKTFFSRVLNSINEHREKFGAAVSALSQLDCLLSLYRAKDSMGSPMCRPVFVSTSGD 1019
Query: 756 DHEPVQIHICSGRHPVLD-TILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
+ + RHP L + + +++PNDT+L E ++TGPNMGGKS +RQ +
Sbjct: 1020 KASRAVLDLREMRHPTLQHSSSITDYIPNDTHLGGEEATTMVLTGPNMGGKSTLLRQTCI 1079
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
IMAQ+G +VPA S L +D I+TR+GA+D+I GRSTF+ EL E + IL T+ SL
Sbjct: 1080 AVIMAQLGCWVPAESFTLTPVDRIFTRIGANDNIVAGRSTFMVELKETATILNKATSSSL 1139
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVS 934
VI+DELGRGTST DG AIA+A L ++ + +C +F THY + D + K +V Y+++
Sbjct: 1140 VILDELGRGTSTFDGYAIAFAVLSHITDAIRCRCMFATHYHLLTD-ELKTNPNVTNYNMA 1198
Query: 935 YLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ +DVT+LYK+ PGV S+G VA +A + S + A A + E
Sbjct: 1199 CVVDDH---------QKDVTFLYKLQPGVCSKSYGMNVAHMAGVMDSIVETAKEKAVQYE 1249
Query: 995 AEVS-SRVQNRSAKRDLLVKL 1014
A ++Q+R AK+ L++
Sbjct: 1250 ATSRFGKLQDRKAKQLALLRF 1270
>gi|388851859|emb|CCF54453.1| related to MSH6-DNA mismatch repair protein [Ustilago hordei]
Length = 1313
Score = 318 bits (814), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 275/945 (29%), Positives = 434/945 (45%), Gaps = 109/945 (11%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K +TP E+Q +K + D +L + G + + EDA + + + +P
Sbjct: 383 KDFTPFEEQFWRIKQNHWDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVP 442
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFG------RGLSALYTKATLE 200
++ + + G+KVG V QTETA K G+ G R L + T T+
Sbjct: 443 EASFDIFAAKFLALGYKVGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIV 502
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
A + + N + + G RNG GV ++ +T +
Sbjct: 503 DAASLPD-------DLNSYCVSIKESSEAG--RNGPI-------FGVCTLDAATAEFNLT 546
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
EF D R+ LE +L SL E+L + LS T ++L + + + + + F
Sbjct: 547 EFEDDESRTRLETLLRSLRLKEVLHEKAGLSAPTLRVLQSTVPTTAQITMLKPGVEFFEP 606
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD--LAVQALALTIR 377
L ++ +L+ N D D ++ + + EGI +M D + AL +
Sbjct: 607 DTTLRKLNALF-NPEVDA-----DARVESLDPVDPSLLPEGIASMVDKPCGMSALGGMLC 660
Query: 378 HLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
+L Q L+R +C +F L + L+A +L L VL+N+ G++ GTL ++N
Sbjct: 661 YLAQLNLDRDLCSSRNFNIFDPLRQDKCLVLNAQSLTHLNVLQND-EGTDEGTLHRLLNR 719
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
+T +G RL + W+ PL + I AR DAV ++ ++ G E+ G+
Sbjct: 720 CVTPFGKRLFKIWLVAPLAAADAIRARQDAVEDLLKNQGFGDEFETFGKA---------- 769
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
PDI+R + R+ P +F AV++AI K ++QL
Sbjct: 770 -----------------LPDIERIVPRVRAGKCRPRDFTAVLKAIACFEKAVRQL----- 807
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+ K + ++ L+ S P+V A L S+ + A+ G + G F
Sbjct: 808 ---RAQCKDFETQVIDDLL--QSIPSVSSMARDLQSSF--KVAEDGSFTPI----EGAFE 856
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL-------IELPANFKVP 667
RA A+ + +L+S I R+QL + + HL IE+P + KVP
Sbjct: 857 PYDRAEVAIAEVEAQLESEIESYRQQLKLT----AAKCAWKHLGTKDIFQIEVPISTKVP 912
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
NW K++ TK R++SP+V + + A E + S F F AV
Sbjct: 913 SNWTKLSGTKDRNRWYSPKVRDLVQDIKEARETRLAALKQFHQSLFASFSEKSDVFLQAV 972
Query: 728 QALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPN 783
+ +A +DCL +LA S + RP VD +E + RHP I DN F+PN
Sbjct: 973 KTVAEIDCLLSLAKASYAIGEPSCRPELVD-NETALLEFEELRHPC---IAGDNVEFIPN 1028
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D L + + I+TG NM GKS R A I+AQ+G VPA+SA + +D I +RMG
Sbjct: 1029 DIRLGGKNDEVIILTGGNMAGKSTTARTSATAVILAQLGCRVPAASARISPVDRIASRMG 1088
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D I + STF+ E+ EAS I+ CT +SLVI+DELGRGTST DG AIA+A L +L+
Sbjct: 1089 ANDQIFRNNSTFMVEMLEASRIINECTPRSLVIMDELGRGTSTFDGQAIAFAVLHHLVSR 1148
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
+C+ F+THY +A ++ V H+ L D+K ++V + Y++V G+
Sbjct: 1149 TRCLTFFLTHYTNLAYDFDSYS-RVSNKHMQVLVD-------DAK--REVIFTYRLVDGI 1198
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKL--EAEVSSRVQNRSA 1006
+ESS+G +VA LA +P RA V++ + +VS +NRSA
Sbjct: 1199 AESSYGTQVAALAGVPHEICDRAAVVSKQFAEATKVSQAEKNRSA 1243
>gi|157867010|ref|XP_001682060.1| putative mismatch repair protein MSH3 [Leishmania major strain
Friedlin]
gi|68125511|emb|CAJ03372.1| putative mismatch repair protein MSH3 [Leishmania major strain
Friedlin]
Length = 1008
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 321/1065 (30%), Positives = 471/1065 (44%), Gaps = 233/1065 (21%)
Query: 84 THNKKYTPLEQQVVELKTKY-PDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT 142
T TPLEQQVV LK P V+LM+ GY+ +F+G D+ ++ +GI F
Sbjct: 30 TEGVSLTPLEQQVVALKESISPHVILMVACGYRVKFYGSDSRAVSRRVGIMCIPGQPFEY 89
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+S P R++++V RLV G+ VG Q E+AA++A K G F R +S LY++ TL
Sbjct: 90 SSFPYTRVDLYVHRLVAMGYHVGFADQ-ESAAMRAADGLKCGLFTRSVSQLYSRGTLLPT 148
Query: 203 EDV-----------------------GGGE----DGCG--------------GESNYLVC 221
E V G GE DG G G S +C
Sbjct: 149 ERVTSGGGNGCGPGDASKVPEEESCAGAGEAKEGDGNGFSWPPPHAPPSPDAGASELFLC 208
Query: 222 VVDDDGNVGKIRNGVFGDGFDVR------LGVVAVEISTGDVVYGEFNDGFLRSGLEAVL 275
+D G G R D D L VV V T + + LE V
Sbjct: 209 FIDA-GRCGGTRG--INDADDAPTAARPPLSVVLVSFVTQRCLRFDVRGAL---ELEDVT 262
Query: 276 LSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRD--------CFIGGGALAEVM 327
AE+++ LA P+ C SRD CF+ AL EV
Sbjct: 263 QRYDIAEVIV------------LAVESPSRA----CGSRDVSLQRTTACFLK--ALPEVY 304
Query: 328 S------LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ L N G +N E+ DV G +A + I D A++A +LK
Sbjct: 305 ATALRQGLALNFGPT--ANGEEDGKDVSVSGYVYAAGQSI----DAAIEA------YLKP 352
Query: 382 FGLERIMCLGASFRSLSG---SMEMTLSAN-----------------------------T 409
+ L+++ +RSL S E L N T
Sbjct: 353 YRLDQV------YRSLCARRSSTEEALRENEEGAAAVAFPAHDGASTDARLRCLHLPGPT 406
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L+ L+V +S+ G+L+ +++H++T GSR LRRW+T PLC+R I AR + ++ +
Sbjct: 407 LRALDVF--HSSVGLRGSLVGLLDHSVTPCGSRCLRRWLTAPLCERASIVARQEVLAYLM 464
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
V + D + D +L R DI+ +++++
Sbjct: 465 -----------VCKDDGQVED--------------LLHECARLGDIEAVVSKLYAERCQV 499
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
EF+ +++ + QL G + S + +LL +L+ + PAV A+LL
Sbjct: 500 VEFVRLLRMVRSVSVLAAQLC--GTEGDAGLSSSRPPSLLTQLLASVHGPAV----ARLL 553
Query: 590 STVNKEAADQGDLLNLMIISNGQ-FSEVARA--------RKAVQSAKEELDSLINMCRKQ 640
Q LL + + F+E RA KA Q A+ L + + RK
Sbjct: 554 ER-------QAALLRTTATTPLEYFTEGGRAVPDALLPHLKARQEAEAALQAELEAARKV 606
Query: 641 LGMRNLEFMSVSGITHLIELPA--NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALAN 698
LG+ LE+ +V G L+++PA +VP +W TK +RYH+P + L A
Sbjct: 607 LGLPGLEYRTVCGTPFLLDVPACKCARVPSDWVVQTRTKTNVRYHTPIITEQHIALTAAT 666
Query: 699 EELTIVCRAAWDSFLKEFGGYYAEFQ---AAVQALAALDCLHALATLSRNKNFVRPVFVD 755
E L++ AAW ++ Q V+A+A+LD L +LA +S+ +V P V
Sbjct: 667 ERLSLAATAAWWQHQRDTVADAEVMQVLTGVVEAIASLDALRSLALVSQQPGYVMPALVA 726
Query: 756 DHE-----------PVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGG 804
E PV + I GRHP+LD +L +V D L A + ++TGPNMGG
Sbjct: 727 LPECARQSSTSASSPVVLTIRQGRHPILDRLLPHGYVSCDVQLRAGGAW--LLTGPNMGG 784
Query: 805 KSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASY 864
KS +R V ++AQ+G VPA +AEL V +GIY RMGASDSI +G STFL E++E S
Sbjct: 785 KSALMRMVGTFVVLAQMGCGVPADAAELPVFEGIYCRMGASDSILEGASTFLSEMDETSR 844
Query: 865 ILRNCT-AQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD--IK 921
ILR SLV++DELGRGTS+ DG A+A ATL+YLL+ ++ +FVTHY + + +
Sbjct: 845 ILRAPQLPHSLVLMDELGRGTSSFDGAAVAAATLEYLLD-RRATTVFVTHYCYLCNPYVA 903
Query: 922 TKFTGS---------------VGTYHVSYLTSHKVMGPM-DSKSDQDVTYLYKVVPGVSE 965
+ TGS V Y++ + S P+ D + + YK GV+
Sbjct: 904 RRTTGSGEKEERRVNADDARDVTCYYMGFKESDP--SPLADHGMKPSLVFTYKPCRGVTP 961
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
SSFG + + A LP S T A++L AE Q K+DL
Sbjct: 962 SSFGVAIGREAGLP----SGVTDTASRLSAEAE---QQHRVKQDL 999
>gi|169596160|ref|XP_001791504.1| hypothetical protein SNOG_00833 [Phaeosphaeria nodorum SN15]
gi|160701244|gb|EAT92328.2| hypothetical protein SNOG_00833 [Phaeosphaeria nodorum SN15]
Length = 1217
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 260/937 (27%), Positives = 429/937 (45%), Gaps = 113/937 (12%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
++P E+Q E+K+K+ D ++ + G + + +DA + ++ + N +P
Sbjct: 327 FSPFEKQYWEIKSKFWDTIVFFKKGKFYELYEKDASIGHQLFDLKLTDRVNMRMVGVPEA 386
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIK--------AHGPGKAGP-FGRGLSALYTKATL 199
L++ + V AG KV V Q E+A K KA R L+A+ T TL
Sbjct: 387 SLDMWATQFVAAGHKVARVDQMESALAKEMRERDDKKSTTKKADKVIRRELAAVLTAGTL 446
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
D G + S Y + + + + R+ + GV V+ +T
Sbjct: 447 V---DTGMLQSDM---STYCMAIKEIE------RDNLPA------FGVAFVDSATAQFQL 488
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFI 318
E D + E ++ + P ELL+ + +S + ++L P++ S++ +
Sbjct: 489 CEIADDIDMTKFETLIAQMRPGELLIEKSCISAKALRILKNNTAPSTIWNYLKPSKEFWP 548
Query: 319 GGGALAEVMS--LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
+ E+ S +E+ ED + + EQ DL + A +
Sbjct: 549 ADITIREIDSNNYFESPTEDNVEAWPPVLREAREQ--------------DLVMSAFGALL 594
Query: 377 RHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
++L+ +ER + +F+ + S + L +L LE+ N+ +GS GTL ++N
Sbjct: 595 QYLRTLKIERDLVTCGNFQWYDPIRKSTTLVLDGQSLINLEIFANSFDGSAEGTLFAMLN 654
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
+T +G RLLR+WV HPL D I+ARLDAV D N+D TI
Sbjct: 655 RCITPFGKRLLRQWVCHPLADAQKINARLDAV-------------------DALNADSTI 695
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA---ILYAGKQLQQLH 550
++ + SL + PD++R I+R+ +F+ V++ I Y L+Q
Sbjct: 696 MD--------NFSASLSKLPDLERLISRVHANRCKAQDFLKVLEGFEQIEYTVSLLKQFS 747
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN 610
+GE ++ +LI S P + S +++ A + +L +
Sbjct: 748 -EGE------------GVIGQLI--TSMPDLASALEPWKSAFDRDLAKKEGIL---VPEP 789
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNW 670
G + +++ + K LD L+ RK+LG + F + + +E+P KVP W
Sbjct: 790 GVEEDFDNSQQEIDECKANLDQLLKKARKELGNNGIVFKDIGKEVYQLEVPKKVKVPNTW 849
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
++++T K RY++PE+ + L A E + R F F Y + AAV+ +
Sbjct: 850 DQMSATAKVSRYYTPELRKLVRALQEAEETHGQIVREVASRFCVRFDENYKTWLAAVKII 909
Query: 731 AALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGRHP-VLDTILLDNFVPNDTNL 787
A LDCL +LA S + + RPVF + V + RHP +L+T+ D+F+PND L
Sbjct: 910 AQLDCLISLAKASSSLGEPSCRPVFSEGKRTV-VEFEELRHPCMLNTV--DDFIPNDIRL 966
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ ++TG N GKS +R + IMAQVG ++P +SA+L +D I +R+GA+D+
Sbjct: 967 GGDESNISLLTGANAAGKSTILRMTCIAVIMAQVGCYLPCTSAKLTPVDRIMSRLGANDN 1026
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
I +STF EL+E IL T +SLVI+DELGRGTS++DGVA+A A L + C+
Sbjct: 1027 IFAAQSTFFVELSETQKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHDIASRVGCV 1086
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
F THY +A + +K M +S + +T+LYK+ GV+E S
Sbjct: 1087 GFFATHYRSLAK----------EFEFHPEVQNKRMRIHVDESSKSITFLYKLEEGVAEGS 1136
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNR 1004
FG A + +P I A A E E +SR+ R
Sbjct: 1137 FGMHCAAMCGIPSKIIDNAE--KAAREWEHTSRLGER 1171
>gi|148668642|gb|EDL00961.1| mCG131439, isoform CRA_c [Mus musculus]
Length = 960
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 207/580 (35%), Positives = 304/580 (52%), Gaps = 74/580 (12%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +++K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 187 YTPLELQYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTL-IGEDVNPL 305
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E +NYL+C+ ++ N+ + G ++ +GVV V+ +TG+VV
Sbjct: 306 IRLDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKG------NLSVGVVGVQPATGEVV 359
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D R LE + SL P ELLL LS TE ML+ A S +RVE +
Sbjct: 360 FDCFQDSASRLELETRISSLQPVELLLPSDLSVPTE-MLIQRATNVSVRDDRIRVERMNN 418
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y D+ QG+ ++ G++N+ + ALA
Sbjct: 419 TYFEYSHAFQTVTEFYAREIVDS-------------QGSQ--SLSGVINLEKPVICALAA 463
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
IR+LK+F LE+++ SF+ LS ME M ++ TL+ LE+L+N ++ G+LL +++
Sbjct: 464 VIRYLKEFNLEKMLSKPESFKQLSSGMEFMRINGTTLRNLEILQNQTDMKTKGSLLWVLD 523
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L+ WVT PL I+ARLDAVS++ S S
Sbjct: 524 HTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESS------------------- 564
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PD++RG+ I+H+ + EF +++++ +LQ L
Sbjct: 565 -------VFEQIENLLRKLPDVERGLCSIYHKKCSTQEFFLIVKSLCQLKSELQALM--- 614
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ + S LL+ LI+ A P ++ L +N AA GD L F
Sbjct: 615 ----PAVNSHVQSDLLRALIVEA--PELLSPVEHYLKVLNGPAAKVGDKTELF-KDLSDF 667
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+ + + +Q + + RK L + +L++++VSG
Sbjct: 668 PLIKKRKNEIQEVIHSIQMRLQEFRKILKLPSLQYVTVSG 707
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 153/223 (68%), Gaps = 5/223 (2%)
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
E IITGPNMGGKS YI+QVAL+ IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +G
Sbjct: 712 ERVMIITGPNMGGKSSYIKQVALVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKG 771
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFV 911
RSTF+EEL + + I+R + QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LFV
Sbjct: 772 RSTFMEELTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFV 831
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
THYP + +++ + VG YH+ +L S + G M+ D VT+LY++ G++ S
Sbjct: 832 THYPPVCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPD-SVTFLYQITRGIAARS 890
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
+G VA+LA +P + +A + +LE VS R + DL
Sbjct: 891 YGLNVAKLADVPREVLQKAAHKSKELEGLVSLRRKRLECFTDL 933
>gi|451997168|gb|EMD89633.1| hypothetical protein COCHEDRAFT_1194981 [Cochliobolus heterostrophus
C5]
Length = 1213
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 267/971 (27%), Positives = 446/971 (45%), Gaps = 120/971 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P TL IP P++ + ++P E+Q E+K+K+ D ++ + G + + +D
Sbjct: 299 PDHPDYDPRTLF-IP-PAAW----RDFSPFEKQYWEIKSKWWDTIVFFKKGKFYELYEKD 352
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------A 174
A + ++ + N +P L++ + V AG+KV V Q E+A
Sbjct: 353 ASIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAGYKVARVDQMESALGKEMRERD 412
Query: 175 IKAHGPGKAGPFG-----RGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNV 229
K P KA G R L+ + T TL D G + S Y + + + D
Sbjct: 413 DKGKTPKKAEKKGKEVIRRELATVLTSGTL---VDTGMLQSEM---STYCMAIKEID--- 463
Query: 230 GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP- 288
R+ + G+ V+ +T EF D + E ++ + P ELLL +
Sbjct: 464 ---RDNLPA------FGIAFVDTATAQFQLCEFTDDIDMTKFETLIAQMRPGELLLEKSC 514
Query: 289 LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
+S + ++L GP + +++ + + E+ + N E +N + V
Sbjct: 515 VSAKALRILKNNTGPTTIWNWLKLNKEFWPADITIREIEA--NNYFESPTEDNIEAWPAV 572
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTL 405
+ + +L + A +++L+ +ER + +F+ + + + L
Sbjct: 573 LREAREK----------ELVMSAFGALLQYLRTLMIERDLVTLGNFQWYDPIRKATSLVL 622
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
+L LE+ N +G+ GTL ++N +T +G RLLR+WV HPL D I+ARLDAV
Sbjct: 623 DGQSLINLEIFANTFDGATEGTLFAMLNRCITPFGKRLLRQWVCHPLADAQKINARLDAV 682
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
D N D I+E + SL + PD++R I+R+
Sbjct: 683 -------------------DALNKDSAIME--------NFSGSLSKLPDLERLISRVHAG 715
Query: 526 TATPSEFIAVMQA---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
+F+ V++ I Y L+Q +GE ++ +LI +S P +
Sbjct: 716 RCKAQDFLKVLEGFEQIEYTISLLKQFS-EGE------------GVIGQLI--SSMPDLA 760
Query: 583 GKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
K S ++EAA + +L I G + ++ + S + L++L+ RK+ G
Sbjct: 761 ACLEKWKSAFDREAARKDGIL---IPEAGVEEDYDNSQAEIDSCEANLETLLKKVRKEQG 817
Query: 643 MRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
+ + + + +E+P KVP +W ++++T K RY++PE+ + L A E
Sbjct: 818 SNAIIYNHLGKEIYQLEVPKKVKVPNSWDQMSATAKVTRYYTPELRKLVRALQEAQETHG 877
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL--ATLSRNKNFVRPVFVDDHEPV 760
+ R F + F Y + AAV+ +A LDCL +L A+ S + RPVFV+ V
Sbjct: 878 QITREVATRFCQRFDEDYKIWLAAVKIIAQLDCLISLAKASASLGEPSCRPVFVEGERTV 937
Query: 761 QIHICSGRHP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMA 819
+ RHP +L+T+ D+F+PND L + ++TG N GKS +R + I+A
Sbjct: 938 -VEFEELRHPCMLNTV--DDFIPNDIKLGGDEANISLLTGANAAGKSTILRMTCIAVILA 994
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
QVG ++P +SA L +D I +R+GA+D+I +STF E++E IL T++SLVI+DE
Sbjct: 995 QVGCYLPCTSARLTPVDRIMSRLGANDNIFAAQSTFFVEMSETQKILSEATSRSLVILDE 1054
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
LGRGTS++DGVA+A A L + C+ F THY +A + +
Sbjct: 1055 LGRGTSSYDGVAVAQAVLHDVATRVGCVGFFATHYRSLAK----------EFEFHPEVQN 1104
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
K M + +T+LYK+ GV+E SFG A + +P I A A E E +S
Sbjct: 1105 KRMRIHVDDESKSITFLYKLEEGVAEGSFGMHCAAMCGIPSKVIEDAEKAAK--EWEHTS 1162
Query: 1000 RVQNR-SAKRD 1009
R+ R K+D
Sbjct: 1163 RLGERMEVKKD 1173
>gi|405123347|gb|AFR98112.1| DNA mismatch repair protein msh6 [Cryptococcus neoformans var. grubii
H99]
Length = 1213
Score = 316 bits (810), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 271/950 (28%), Positives = 439/950 (46%), Gaps = 113/950 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
++TP E+Q E+K + D +L + G + + +DA + + + +P
Sbjct: 305 EFTPFEKQFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVGVPE 364
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETA---AIKAHGPGKAGP---FGRGLSALYTKATLEA 201
L + + + AG KVG+V Q ETA ++ K+G R L+ ++T T+
Sbjct: 365 QSLEFWIAKFLGAGHKVGIVDQAETAIGMEMRTKAGQKSGGREIVRRELARVFTNGTI-- 422
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V GG YL DD ++ I+ G G+ + STG+
Sbjct: 423 ---VDGG---------YLNS--DDPNHLVSIKESSSGPEGTSSFGICIADASTGEFSISF 468
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
F D R+ LE + + P EL+ + LS T ++L N+ + F G
Sbjct: 469 FEDDVCRTRLETMFRQIRPKELIHAKGNLSVMTTRLL-------RNILPSSTAWQSFKDG 521
Query: 321 GALAEVMSLYENMGEDTLS------NNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
EDTL+ ++E+ +PE AI + + DLA+++L
Sbjct: 522 KEFY--------TAEDTLNLLPSIFSSEEGEGAIPE------AIISLQDN-DLAMESLGG 566
Query: 375 TIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+ +LK L++ + +F + + L TL +EVL NN G+E GTL +
Sbjct: 567 MLFYLKSLNLDKDLFSQRNFNIYDPIKEGKNLILDGKTLGHMEVLVNNEGGTE-GTLAEL 625
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
+ ++ G RL + W+ PL D + I+ARLDAV ++
Sbjct: 626 LQRCVSPSGKRLFKVWLRSPLRDADAINARLDAVEDL----------------------- 662
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
+ P+F + + L PD++R I+RI + S+ + V+++ K + L I
Sbjct: 663 -MNHPRFSGDFTQLCKGL---PDLERLISRIHAGSVKQSDLLQVVESFSKLQKGIDNL-I 717
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
D S++L S +K L+ +A + + K + + T+ +Q + ++ + G
Sbjct: 718 D-------MSESLESTGVKALLRSAPDLSGMIKHIRGMYTI-----EQNEKTIAILPNPG 765
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM-SVSGITHL--IELPANFKVPL 668
E A V+ +EEL+ + +K L + F S G + I+LPA+ K P
Sbjct: 766 ADEECDAADAEVERIEEELNDTLEHVKKTLKCKEAVFWHSAQGGKEIFQIQLPASVKAPA 825
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
W K + TK RY++PE + + Q+ A E + + ++EF + V+
Sbjct: 826 RWTKASGTKSHNRYYTPETIPVIRQIQEARETQAAAKKNFFKHLMEEFSKDRETWLTTVR 885
Query: 729 ALAALDCLHALATLSRNKN--FVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
+A LDCL +LA S + + RP FV I RHP + L +F+ ND
Sbjct: 886 VVAELDCLVSLAKASSDMDEPKCRPTFVSSSSAF-IDFRDLRHPSM--CLRSDFISNDVQ 942
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L E+ ++TGPNM GKS +R A IMAQ+G +VPAS A+L +D I TRMGA D
Sbjct: 943 LGGEQPRQVLLTGPNMAGKSTLLRMTAAGVIMAQLGCYVPASEAKLSPVDKIQTRMGAYD 1002
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
++ STF EL+E S ILR +SLVI+DELGRGTST+DG+AIA A L ++ H
Sbjct: 1003 NMFASASTFKVELDECSRILREAGPKSLVILDELGRGTSTYDGMAIAGAVLHHIATHSLP 1062
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
+ F THY + D F YH + H + +D + Q V +LYK++PGV+ES
Sbjct: 1063 LGFFATHYGSLTD---DF-----AYHPNIRRMH-MQTHVDDEQKQ-VVFLYKLIPGVAES 1112
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSD 1016
S G VA++A +P + RA ++ + + + ++ NR + +V +D
Sbjct: 1113 SHGTHVARMAGVPLDVVLRAESVSQQFFSAFNDKLINRRQSKMPIVAQAD 1162
>gi|390599126|gb|EIN08523.1| DNA mismatch repair protein Msh6 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1174
Score = 316 bits (810), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 280/976 (28%), Positives = 432/976 (44%), Gaps = 116/976 (11%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P +P P TL+ IP + K++TP E+Q E+K + D +L + G + +D
Sbjct: 225 PGEPGYDPRTLH-IPAKAW-----KEFTPFEKQFWEIKQNHFDTVLFFQKGKFLELYEDD 278
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK----AH 178
A + + + +P N + + G+KVG V Q+ETA A
Sbjct: 279 ARIGHREFDLKLTNRVKMCMVGVPESSFNFWAAKFLAKGYKVGRVDQSETALGAEMRLAA 338
Query: 179 GPGKAGPFG-------RGLSALYTKATLEAAEDVGGGEDG-CGGESNYLVCVVDDDGNVG 230
K GP G R L+ +YT TL AE + E G C + D +
Sbjct: 339 DKAKGGPKGKADKIVQRELNKVYTNGTLVDAELLIDEEAGHCVSIREH---APDPENPAD 395
Query: 231 KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PL 289
+ FG V ++ ST + F D R+ LE +L L P E++ + L
Sbjct: 396 AKKESTFG--------VAVLDSSTSEFNLSAFEDDVCRTKLETLLRQLRPKEIIFTKGNL 447
Query: 290 SKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVP 349
S T ++L A P + + F L E+ LY G ++ DVP
Sbjct: 448 SVSTNRLLKATL-PEGCLWTSLRDVEGFDYDQTLKELAELYPATGNAMRDEDDPVGGDVP 506
Query: 350 EQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLS 406
E AI M A++AL I +L+Q +++ + +F + + L
Sbjct: 507 E------AIRD-MYASKPAIEALGSLIWYLRQLNIDKDILSMKNFNIYDPMKRGQGLVLD 559
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TL +EVLRN S+G+E G+LL ++ +T +G RL R W+ PL I+ARLDAV
Sbjct: 560 GQTLAHIEVLRN-SDGTEDGSLLKLLGRCITPFGKRLFRIWLCMPLKRVEDINARLDAVQ 618
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
++ ++ P F + + + L PD++R ++RI
Sbjct: 619 DLLDN------------------------PSFEQMFTELAKGL---PDLERIVSRIHANN 651
Query: 527 ATPSEFIAVMQAILYAGKQLQQL-HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
T +F+ V+QA L L + E+ K+ + L SA P +
Sbjct: 652 CTVKDFLKVLQAFKKLSNGLSSLADVAAEFDSKMITGLLRSA-----------PDLTPNL 700
Query: 586 AKLLSTVNKEAADQGDLLNLMIISNGQF----SEVARARKAVQSA----KEELDSLINMC 637
+ S K A G+L M + ++ SE+AR KA++ ++E+ + +
Sbjct: 701 KNVQSMFKKPAEGSGEL-EPMDGKDEEYDNVMSEIARLEKALEKKLKQLEDEVGTDLTYW 759
Query: 638 RKQLGMRNLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLAL 696
LG +++ +L++ A+FK +P W K +TK R+ P + + L
Sbjct: 760 HSALGTKDI---------YLVQTKASFKNIPKQWTKHGATKAAARWTVPALAGTIRALKE 810
Query: 697 ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFV 754
A E + + EF + A++ LA LDCL +LA S + RP V
Sbjct: 811 ARENRNTAIKQFKNRLFAEFDADRGVWLRAIRVLAELDCLFSLAKSSTALGEPICRPELV 870
Query: 755 DDHEPVQIHICSGRHPVL--DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQV 812
+ + + RHP L + L +F+PND L + ++T N GKS +R
Sbjct: 871 E-GDAAFVDFEELRHPALLASSSLKGDFIPNDVRLGGDVGRIVLLTASN-SGKSTAMRMT 928
Query: 813 ALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQ 872
A IMAQ+G VPA SA+L +D I TRMGA D++ STF EL+E+ ILR T +
Sbjct: 929 AAGVIMAQLGMMVPARSAKLCPVDAILTRMGAYDNMFSNASTFKVELDESCKILREATPK 988
Query: 873 SLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYH 932
SLVI+DELGRGTST+DG+AIA A L L H + F THY + D F YH
Sbjct: 989 SLVILDELGRGTSTYDGMAIAGAVLHELATHTLALSFFATHYGSLTD---DF-----AYH 1040
Query: 933 VSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAK 992
+ H M M Q++ +LYK+V G++ SSFG VA+LA +P + RA V++
Sbjct: 1041 PNIRNMH--MATMVDDEQQELVFLYKLVDGIASSSFGTHVAKLAGVPSDVVQRAAVVSED 1098
Query: 993 LEAEVSSRVQNRSAKR 1008
+ ++ N K+
Sbjct: 1099 FARQFKEKLANNVRKK 1114
>gi|409076365|gb|EKM76737.1| hypothetical protein AGABI1DRAFT_78171 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1262
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 273/966 (28%), Positives = 439/966 (45%), Gaps = 103/966 (10%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
K P +P P TL+ PSS K++TP E+Q E+K + D +L + G F +
Sbjct: 313 KRPGEPGYDPRTLH---IPSSVW---KEFTPFEKQFWEIKQNHYDTVLFFQKGKFFELYE 366
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA---AIKA 177
+DA + + + +P L+ + + G+KVG V Q+ETA ++
Sbjct: 367 DDARIGHQEFDLKLTSRVKMSMVGVPEMSLDFWTAKFLGKGYKVGRVDQSETALGAEMRN 426
Query: 178 HGPGKAGPFG--------RGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNV 229
GKA R L+ +YT TL E + + D+ G+
Sbjct: 427 KSKGKASEDKAKDKIVRRRELNKVYTNGTLVDPE----------------LLIDDNAGHC 470
Query: 230 GKIRNGVFGDGFDV--RLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ 287
I DG D+ + G+ ++ ST F D R+ LE ++ + P ELL +
Sbjct: 471 VAITEEPSEDGKDLQNKFGICVLDCSTSQFNLSAFEDDVCRTKLETLMRQIRPKELLFKK 530
Query: 288 -PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQ-N 345
LS T +ML P + + + + F + ++ +L+ ED + +D
Sbjct: 531 GSLSVSTTRMLKMIL-PTNVLWTSLRTVEGFDYDQTMEQLKTLFPPGDEDMEDDGDDALP 589
Query: 346 MDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSME 402
VPE +I + + P A+++L I +L+Q +++ + +F +
Sbjct: 590 ASVPE------SIREMASYPK-AIESLGCMIWYLRQLNIDKEIISMKNFNVYDPMKRGQG 642
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
+TL +L LE+L NN G+E G+LL ++N +T +G RL R W+ PL + I+ARL
Sbjct: 643 LTLEGQSLAHLEILINNE-GTEDGSLLKLLNRCITSFGKRLFRIWLCMPLRNVVDINARL 701
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV +I + P F + L PD++R ++RI
Sbjct: 702 DAVEDI------------------------MNHPTFEADFVEIAKGL---PDLERIVSRI 734
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
+F+ V+ + + L +L + E SKT+ L L +P +I
Sbjct: 735 HANNCKIKDFLKVLASFRKLSRGLNKL---ADESEDFKSKTI-------LGLLRGAPDLI 784
Query: 583 GKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
K + + + G + ++ G+ E + + +L+ ++ Q+G
Sbjct: 785 PHV-KHIEEMFQRPDPSGKASDELLPQKGKDEEYDAIVAEINGVEGKLEEALSELEDQVG 843
Query: 643 MRNLEFMSVSG--ITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
+ + S +G +L+E+ K P W K + TK RY P + + + QL A E
Sbjct: 844 FKLTYWHSATGHKDIYLVEIAVAKKAPSTWTKHSGTKAKNRYVVPSLQSKIRQLKEAREN 903
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDD-H 757
T ++ EF + + +++ A LDCL +LA S RP FV++ H
Sbjct: 904 RTTAIKSFKSRLFAEFDQDRSVWLRSIRVFAELDCLFSLAKSSTVIGSPSCRPEFVENAH 963
Query: 758 EPVQIHICSGRHPVLD-TILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIG 816
+ RHP+L L NF+ ND L + ++TGPNM GKS +R A+
Sbjct: 964 GSTFVDFEELRHPILCLNTNLKNFIANDVKLGGDVGKVALLTGPNMAGKSTLMRMTAIGV 1023
Query: 817 IMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVI 876
IMAQ+G FVPAS A L +D I TRMGA D++ STF EL+E S ILR T +SLVI
Sbjct: 1024 IMAQLGMFVPASKARLSPVDSIITRMGAYDNMFAHASTFKVELDECSKILREATPRSLVI 1083
Query: 877 VDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL 936
+DELGRGTST DG+AIA A L L H + F THY + D + ++ H+S L
Sbjct: 1084 LDELGRGTSTFDGMAIAGAVLHQLATHTLPLTFFATHYGSLTDDFAQHP-NIRNMHMSTL 1142
Query: 937 TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
D K +++ +LYK++ GV+ESSFG VA LA +P + RA +++ + +
Sbjct: 1143 VD-------DEK--KELVFLYKLIDGVAESSFGTHVANLAGVPFEVVERADIVSKQFAKQ 1193
Query: 997 VSSRVQ 1002
+++
Sbjct: 1194 FKEKLE 1199
>gi|451852581|gb|EMD65876.1| hypothetical protein COCSADRAFT_198733 [Cochliobolus sativus ND90Pr]
Length = 1213
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 269/973 (27%), Positives = 446/973 (45%), Gaps = 124/973 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P TL IP P++ ++++P E+Q E+K+K+ D ++ + G + + +D
Sbjct: 299 PDHPDYDPRTLF-IP-PAAW----REFSPFEKQYWEIKSKWWDTIVFFKKGKFYELYEKD 352
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------A 174
A + ++ + N +P L++ + V AG+KV V Q E+A
Sbjct: 353 ASIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAGYKVARVDQMESALGKEMRERD 412
Query: 175 IKAHGPGKAGPFG-----RGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNV 229
K P KA G R L+ + T TL D G + S Y + + + D
Sbjct: 413 DKGKTPKKAEKKGKEVIRRELATVLTSGTLV---DTGMLQSEM---STYCMAIKEID--- 463
Query: 230 GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP- 288
R+ + G+ V+ +T EF D + E ++ + P ELLL +
Sbjct: 464 ---RDNLPA------FGIAFVDTATAQFQLCEFTDDIDMTKFETLIAQMRPGELLLEKSC 514
Query: 289 LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE--VMSLYENMGEDTLSNNEDQNM 346
+S + ++L GP + +++ + + E V +E ED +
Sbjct: 515 VSAKALRILKNNTGPTTIWNWLKLNKEFWPADITIREIEVNKYFELPTEDNIEAWPPVLR 574
Query: 347 DVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEM 403
+ E+ +L + A +++L+ +ER + +F+ + + +
Sbjct: 575 EAREK--------------ELVMSAFGALLQYLRTLMIERDLVTLGNFQWYDPIRKATSL 620
Query: 404 TLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLD 463
L +L LE+ N +G+ GTL ++N +T +G RLLR+WV HPL D I+ARLD
Sbjct: 621 VLDGQSLINLEIFANTFDGATEGTLFAMLNRCITPFGKRLLRQWVCHPLADAQKINARLD 680
Query: 464 AVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIF 523
AV D N D I+E + SL + PD++R I+R+
Sbjct: 681 AV-------------------DALNKDSAIME--------NFSGSLSKLPDLERLISRVH 713
Query: 524 HRTATPSEFIAVMQA---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPA 580
+F+ V++ I Y L+Q +GE ++ +LI +S P
Sbjct: 714 AGRCKAQDFLKVLEGFEQIEYTISLLKQFS-EGE------------GVIGQLI--SSMPD 758
Query: 581 VIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQ 640
+ K S ++EAA + +L I G + ++ + S + L++L+ RK+
Sbjct: 759 LAACLEKWKSAFDREAARKDGIL---IPEAGVEEDYDNSQAEIDSCEANLETLLKKVRKE 815
Query: 641 LGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
G + + + + +E+P KVP +W ++++T K RY++PE+ + L A E
Sbjct: 816 QGSNAIIYNHLGKEIYQLEVPKKVKVPNSWDQMSATAKVTRYYTPELRKLVRALQEAQET 875
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHE 758
+ R F + F Y + AAV+ +A LDCL +LA + S + RPVFV+
Sbjct: 876 HGQITREVATRFCQRFDEDYKTWLAAVKIIAQLDCLISLAKASASLGEPSCRPVFVEGER 935
Query: 759 PVQIHICSGRHP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
V + RHP +L+T+ D+F+PND L + ++TG N GKS +R + I
Sbjct: 936 TV-VEFEELRHPCMLNTV--DDFIPNDIKLGGDEANISLLTGANAAGKSTILRMTCIAVI 992
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
+AQVG ++P +SA L +D I +R+GA+D+I +STF EL+E IL T++SLVI+
Sbjct: 993 LAQVGCYLPCTSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETQKILSEATSRSLVIL 1052
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
DELGRGTS++DGVA+A A L + C+ F THY +A +
Sbjct: 1053 DELGRGTSSYDGVAVAQAVLHDVATRVGCVGFFATHYRSLAK----------EFEFHPEV 1102
Query: 938 SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEV 997
+K M + +T+LYK+ GV+E SFG A + +P I A A E E
Sbjct: 1103 QNKRMRIHVDDESKSITFLYKLEEGVAEGSFGMHCAAMCGIPSKVIEDAEKAAK--EWEH 1160
Query: 998 SSRVQNR-SAKRD 1009
+SR+ R K+D
Sbjct: 1161 TSRLGERMEVKKD 1173
>gi|403217222|emb|CCK71717.1| hypothetical protein KNAG_0H03020 [Kazachstania naganishii CBS 8797]
Length = 1207
Score = 315 bits (808), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 271/997 (27%), Positives = 441/997 (44%), Gaps = 127/997 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P+ P TL PSS K+TP E+Q E+K + D ++ + G F +
Sbjct: 258 RPPSDPEYDPRTL---AIPSSAWG---KFTPFEKQYWEIKCQMWDCIVFFKKGKFFELYE 311
Query: 121 EDAEMAAKVLG--IYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH 178
+DA +A + + + N A IP + + G+KV V Q E+ K
Sbjct: 312 KDALLANSLFDWKLAGNGRANMQLAGIPEMSFEYWASQFIQLGYKVAKVDQKESMLAKEM 371
Query: 179 GPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFG 238
G G R L + T TL + + + Y + + ++ GN K
Sbjct: 372 REGAKGIVKRELECVLTAGTLTDGDMIHTDL------ATYCLAIKEESGNYYKAEMSNIP 425
Query: 239 DGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKML 297
D G+ ++ +TG+ EF D + L+ ++ + P E+++ + LS K+
Sbjct: 426 TS-DRLFGIAFIDTATGEAKIIEFRDDSECTKLDTIMSQVKPTEVIIEKGNLSNLANKI- 483
Query: 298 LAYAGPASNVRVECASRDCFIGGGALAEVMSL---YENMGEDTLSNNEDQNMDVPEQGNH 354
V+ AS F +E S YE + E+ + P ++
Sbjct: 484 ---------VKFNSASNALFNTIKPESEFYSFDKTYEKLTENDAEYFASEEQWPPVLQSY 534
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQ 411
EG + A + +LK L+R ++ +G + + + L TLQ
Sbjct: 535 YK--EG----KKIGFSAFGGLVYYLKWLKLDRNLVSMGNIEEYNVVKSQNSLVLDGITLQ 588
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
LE+ N +GS+ GTL + N+++T G R++++W+ HPL + I RLD+V E+ S
Sbjct: 589 NLEIFSNTFDGSDKGTLFKLFNNSITPMGKRMMKKWLMHPLLHKTDIEKRLDSV-ELLLS 647
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
G R IL L L PD++R ++R+ + +
Sbjct: 648 DGELRQ-----------------------ILEDALAKL---PDVERMLSRVHSCSIKVKD 681
Query: 532 FIAVMQ---AILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL 588
F V+Q +I+ K L + G R T + K L S
Sbjct: 682 FERVIQGFESIVGLLKSLDNFELKGAIR------TFANQCPKTLYQDVDS---------- 725
Query: 589 LSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEF 648
VN + + N++I G E ++ + S + EL+ ++ +++ +NL F
Sbjct: 726 --WVNAYDRKKAAVENIIIPHRGVEVEFDKSMDEINSLESELNEVLEQYKRKFKCKNLHF 783
Query: 649 MSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCR 706
IE+PA +P +W ++ + K T RY+SPEV +A A E ++
Sbjct: 784 KDSGKEIFTIEVPAAISKHIPSDWIQMAANKTTKRYYSPEVQLLARSMAEARETHKVLEE 843
Query: 707 AAWDSFLKEFGGYY-AEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIH 763
+ ++F ++ + V +A +DC+ ALA S F RP FVD+H+PV +
Sbjct: 844 DLKNRLCRKFDAHFNTSWMPTVHLIANIDCIVALARTSETLGFPSCRPTFVDEHDPVTGN 903
Query: 764 ICSG-------RHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
+G RHP L + ++ +F+PND L + ++TG N GKS +R +
Sbjct: 904 KKNGFLKFKSLRHPCFNLGSAIIKDFIPNDIELGDDVPQVGLLTGANAAGKSTILRITCI 963
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
IMAQ+G FVP SA L +D I TR+GA+D+I QG+STF EL E IL T +SL
Sbjct: 964 AVIMAQMGCFVPCESAVLSPVDRIMTRLGANDNIMQGKSTFFVELAETKKILDMGTNRSL 1023
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVS 934
++VDELGRG S+ DG AIA + L ++ H + + F THY G++G S
Sbjct: 1024 LVVDELGRGGSSGDGFAIAESVLHHVATHMQSLGFFATHY-----------GTLG----S 1068
Query: 935 YLTSHKVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVI 989
+ H + PM + + VT+LYK+ G SE SFG VA + +P S I A +
Sbjct: 1069 HFKGHPQIRPMRMRILVDEGTRKVTFLYKLEDGASEGSFGMHVAAMCDIPRSIIETADKV 1128
Query: 990 AAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMP 1026
A K+E +S++ + A ++LSD E++ +P
Sbjct: 1129 AEKMEQ--TSQLMKKKA-----LQLSDLEEDQIVTVP 1158
>gi|317038145|ref|XP_001401672.2| DNA mismatch repair protein Msh6 [Aspergillus niger CBS 513.88]
Length = 1210
Score = 315 bits (808), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 268/965 (27%), Positives = 441/965 (45%), Gaps = 120/965 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P+ P TL IP P + T K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 297 PEYDPRTLY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 350
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK--------A 177
++ + N +P L+ + V GFK+ V Q E+A K
Sbjct: 351 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRERDGKK 410
Query: 178 HGPGKAGPFGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNG 235
G + R LS++ T TL V G +D S Y CV I+
Sbjct: 411 GGGKEDKVIRRELSSVLTAGTL-----VEGSMLQDDM---STY--CVA--------IKEA 452
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTE 294
+ D G+ V+ +TG EF D + E + P ELLL + +S++
Sbjct: 453 LIDDK--PAFGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKAL 510
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
++L GP + ++ + + E+ ++ E +S ++D PE
Sbjct: 511 RILKNNTGPTTLWNYLKPVKEFWEADITVKEL-----DVSEYFVSQDDDNLQAWPEALRE 565
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQ 411
E +M+ A +++L+ +ER ++ +G ++ + + + L TL
Sbjct: 566 ARDKELVMS-------AFGALVQYLRLLKIERDLITIGNFTAYDPIKKATSLVLDGQTLI 618
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
+E+ N+ +G GTL ++N +T +G R+ ++WV HPL D N I+ARLDAV
Sbjct: 619 NMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARLDAV------ 672
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
D N+D T+ + QF SS LT + PD++R I+R+ +
Sbjct: 673 -------------DALNADPTVRD-QF----SSQLTKM---PDLERLISRVHAANCKAQD 711
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
F+ V++ + L G E V + L + P + +
Sbjct: 712 FLRVLEGFEQIEYTMSLLKESGSAGEGVIGQ-----------LISGMPDLNELLEYWKTA 760
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSV 651
++ A + +L + G + +++ ++ +L+SL+ RK+LG + +
Sbjct: 761 FDRSKARENSIL---VPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDN 817
Query: 652 SGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ +E+P K +P NW ++++TK+ RY+ PE+ + QL A E + + +
Sbjct: 818 GKEIYQLEVPIKVKNIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAG 877
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGR 768
F F Y + AAV+ +A LDCL +LA S + + RPVFVDD V + R
Sbjct: 878 RFYARFDENYTTWLAAVRIVAQLDCLISLAKASSSLGQPSCRPVFVDDERSV-LEFEELR 936
Query: 769 HPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
HP L + + D F+PND L ++TG N GKS +R + IMAQ+G ++P
Sbjct: 937 HPCLISSVGD-FIPNDVQLGGTHANIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQ 995
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++D
Sbjct: 996 SARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYD 1055
Query: 889 GVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
GVA+A A L ++ H + F THY +A +F G H + P +
Sbjct: 1056 GVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEG------------HPEIAPKRMR 1100
Query: 949 -----SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++ VT+LYK+ GV+E SFG A + +P I RA V A + E +SR++
Sbjct: 1101 IHVDDEERRVTFLYKLEDGVAEGSFGMHCAAMCGIPDKVIERAEVAAKQWEH--TSRLKE 1158
Query: 1004 RSAKR 1008
+R
Sbjct: 1159 SLERR 1163
>gi|449544351|gb|EMD35324.1| hypothetical protein CERSUDRAFT_124668 [Ceriporiopsis subvermispora
B]
Length = 1305
Score = 315 bits (808), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 276/978 (28%), Positives = 427/978 (43%), Gaps = 122/978 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P +P P TL P + +TP E+Q E+K + D +L + G + ED
Sbjct: 361 PGEPGYDPRTLYIPPKAWNG------FTPFEKQFWEIKQNHYDTVLFFQKGKFLELYEED 414
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------A 174
A + + + +P N + + G+KVG V Q ETA A
Sbjct: 415 ARIGHREFDLKLTSRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVDQAETALGAEMRLAA 474
Query: 175 IKAHGPGKAGP--------FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDD 226
K G GK R L+ +YT TL AE + + G + V + ++D
Sbjct: 475 DKKGGKGKVAAGDKAKDKIVRRELNKVYTNGTLVDAELLTDEQAG------HCVSIREED 528
Query: 227 GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLG 286
GK G+ ++ +T + F D R+ LE ++ L P E++
Sbjct: 529 DGSGK-----------QTFGICVLDSATSEFNLSAFEDDVCRTRLETMMRQLRPKEMIFT 577
Query: 287 QP-LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQ- 344
+ LS T ++L A P S + + L ++ LY GED + N+
Sbjct: 578 KGNLSVSTTRLLKAIL-PGSCLWTSLRESEGLTYDKTLEKLNELYP-AGEDDIEMNDSPR 635
Query: 345 --NMDVP----EQGNHRSAIEGIMNM-PDLAVQALALTIRHLKQFGLERIMCLGASFRSL 397
N VP E H++++E + +M L + I +K F + M G
Sbjct: 636 HLNNAVPDAIREMAGHKASVEALGSMIWYLNTLNIDKDILSMKNFNVYDPMQRGQG---- 691
Query: 398 SGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNL 457
+ L TL +EVL NN G+E G+LL ++ +T G RL R W+ PL + +
Sbjct: 692 -----LVLDGQTLAHVEVLMNN-EGTEEGSLLKLLGRCITPSGKRLFRIWLCMPLRNVSD 745
Query: 458 ISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQR 517
I+ARLDAV ++ + P F +SV L PD++R
Sbjct: 746 INARLDAVQDL------------------------LNHPSFEQEFTSVAKGL---PDLER 778
Query: 518 GITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTAS 577
++RI + +F+ V+ + L QL E S+T+ S LL+ S
Sbjct: 779 IVSRIHAKNCKVKDFLKVLSSFKTLSNGLSQL---AETAASFDSQTI-SGLLR------S 828
Query: 578 SPAVIG--KAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLIN 635
+P ++ K K + + AD+ ++ +G+ + + ++ELD +
Sbjct: 829 APNLLPNIKHVKAMFKAPEGNADE------LVPEDGKDEVYDGIMEEIHGLEQELDDELK 882
Query: 636 MCRKQLGMRNLEFMSVSGITHL--IELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQ 693
++LG++ + S G + ++ + KVP W K STK R+ P + +
Sbjct: 883 ALERKLGIKLTYWHSAQGTKDIYQVQTRSKEKVPTTWTKSGSTKAVDRWSVPALAPKIRA 942
Query: 694 LALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRP 751
L A E + + EF + + A++ LA LDCL +LA S + RP
Sbjct: 943 LKEARENRNTAIKGFKNRLYAEFDADRSVWLRAIRVLAELDCLFSLAKASAALGEPACRP 1002
Query: 752 VFVDDHEPVQIHICSGRHPVL--DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
++ + I RHP L T L +F+PND L + ++TGPNMGGKS +
Sbjct: 1003 ELIE-GDAAFIDFEELRHPALCTSTGLKGDFIPNDVKLGGDAGRIALLTGPNMGGKSTAM 1061
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
R A IMAQ+G VPA SA L +D I TRMGA D++ STF EL+E ILR+
Sbjct: 1062 RMTATGIIMAQMGMLVPAKSARLCPVDSILTRMGAYDNMFSNASTFKVELDECCKILRDA 1121
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG 929
T +S VI+DELGRGTST+DG+AIA A L L H + F THY + D
Sbjct: 1122 TPKSFVILDELGRGTSTYDGMAIAGAVLHQLATHTLALSFFATHYGSLTDDY-------- 1173
Query: 930 TYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVI 989
YH + H M + +++ +LYK+V GV+ SSFG VA LA +P + RA V+
Sbjct: 1174 AYHPNIKNMH--METLVDDEKRELVFLYKLVEGVASSSFGTHVANLAGVPIEVVERAEVV 1231
Query: 990 AAKLEAEVSSRVQNRSAK 1007
+ + + + + AK
Sbjct: 1232 SKDFAQQFKEKTEGKKAK 1249
>gi|26252149|gb|AAH40784.1| Msh3 protein [Mus musculus]
Length = 385
Score = 315 bits (808), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 226/351 (64%), Gaps = 10/351 (2%)
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
+P +W KV STK R+H P ++ + +L E+L + C A W FL+ FG +Y
Sbjct: 12 IPADWVKVGSTKAVSRFHPPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCK 71
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPN 783
AV LA +DC+ +LA +++ N+ RP E +I I +GRHP++D +L D FVPN
Sbjct: 72 AVDHLATVDCIFSLAKVAKQGNYCRPTL---QEEKKIIIKNGRHPMIDVLLGEQDQFVPN 128
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
T+L + E IITGPNMGGKS YI+QVAL+ IMAQ+GS+VPA A + ++DGI+TRMG
Sbjct: 129 STSLSQDSERVMIITGPNMGGKSSYIKQVALVTIMAQIGSYVPAEEATIGIVDGIFTRMG 188
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D+I +GRSTF+EEL + + I+R + QSLVI+DELGRGTSTHDG+AIAYATL+Y +
Sbjct: 189 AADNIYKGRSTFMEELTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAYATLEYFIRD 248
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLYKV 959
K + LFVTHYP + +++ + VG YH+ +L S + G M+ D VT+LY++
Sbjct: 249 VKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPDS-VTFLYQI 307
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
G++ S+G VA+LA +P + +A + +LE VS R + DL
Sbjct: 308 TRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVSLRRKRLECFTDL 358
>gi|134058585|emb|CAK44621.1| unnamed protein product [Aspergillus niger]
Length = 1193
Score = 315 bits (808), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 268/965 (27%), Positives = 441/965 (45%), Gaps = 120/965 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P+ P TL IP P + T K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 280 PEYDPRTLY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 333
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK--------A 177
++ + N +P L+ + V GFK+ V Q E+A K
Sbjct: 334 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRERDGKK 393
Query: 178 HGPGKAGPFGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNG 235
G + R LS++ T TL V G +D S Y CV I+
Sbjct: 394 GGGKEDKVIRRELSSVLTAGTL-----VEGSMLQDDM---STY--CVA--------IKEA 435
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTE 294
+ D G+ V+ +TG EF D + E + P ELLL + +S++
Sbjct: 436 LIDDK--PAFGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKAL 493
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
++L GP + ++ + + E+ ++ E +S ++D PE
Sbjct: 494 RILKNNTGPTTLWNYLKPVKEFWEADITVKEL-----DVSEYFVSQDDDNLQAWPEALRE 548
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQ 411
E +M+ A +++L+ +ER ++ +G ++ + + + L TL
Sbjct: 549 ARDKELVMS-------AFGALVQYLRLLKIERDLITIGNFTAYDPIKKATSLVLDGQTLI 601
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
+E+ N+ +G GTL ++N +T +G R+ ++WV HPL D N I+ARLDAV
Sbjct: 602 NMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARLDAV------ 655
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
D N+D T+ + QF SS LT + PD++R I+R+ +
Sbjct: 656 -------------DALNADPTVRD-QF----SSQLTKM---PDLERLISRVHAANCKAQD 694
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
F+ V++ + L G E V + L + P + +
Sbjct: 695 FLRVLEGFEQIEYTMSLLKESGSAGEGVIGQ-----------LISGMPDLNELLEYWKTA 743
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSV 651
++ A + +L + G + +++ ++ +L+SL+ RK+LG + +
Sbjct: 744 FDRSKARENSIL---VPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDN 800
Query: 652 SGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ +E+P K +P NW ++++TK+ RY+ PE+ + QL A E + + +
Sbjct: 801 GKEIYQLEVPIKVKNIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAG 860
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGR 768
F F Y + AAV+ +A LDCL +LA S + + RPVFVDD V + R
Sbjct: 861 RFYARFDENYTTWLAAVRIVAQLDCLISLAKASSSLGQPSCRPVFVDDERSV-LEFEELR 919
Query: 769 HPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
HP L + + D F+PND L ++TG N GKS +R + IMAQ+G ++P
Sbjct: 920 HPCLISSVGD-FIPNDVQLGGTHANIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQ 978
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++D
Sbjct: 979 SARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYD 1038
Query: 889 GVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
GVA+A A L ++ H + F THY +A +F G H + P +
Sbjct: 1039 GVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEG------------HPEIAPKRMR 1083
Query: 949 -----SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++ VT+LYK+ GV+E SFG A + +P I RA V A + E +SR++
Sbjct: 1084 IHVDDEERRVTFLYKLEDGVAEGSFGMHCAAMCGIPDKVIERAEVAAKQWEH--TSRLKE 1141
Query: 1004 RSAKR 1008
+R
Sbjct: 1142 SLERR 1146
>gi|149059006|gb|EDM10013.1| rCG44545 [Rattus norvegicus]
Length = 839
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 303/580 (52%), Gaps = 74/580 (12%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +++K + D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 187 YTPLELQYLDVKQLHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTL-IGEDVNPL 305
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E +NYL+C+ ++ N+ + G ++ G+V V+ +TG+VV
Sbjct: 306 IRLDDSVNIDEAVTDTSTNYLLCIYEEKENIKDKKKG------NISFGIVGVQPATGEVV 359
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D R LE SL P ELLL LS+ TE ML+ A S +RVE +
Sbjct: 360 FDCFQDSASRLELETRTASLQPVELLLPSQLSEPTE-MLIRRATAVSVGDDRIRVERMNN 418
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A VM Y DT QG+ ++ G++++ + ALA
Sbjct: 419 THFEYSHAFQTVMEFYARETVDT-------------QGSQ--SLSGVIHLEKPVICALAA 463
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
IR+LK+F L++++ +F+ LS ME M ++ TL+ LE+L+N ++ G+LL +++
Sbjct: 464 IIRYLKEFNLDKVLSKPENFKQLSSGMEFMRINGTTLRNLEILQNQTDMKTRGSLLWVLD 523
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L++WVT PL I+ARLDA+S++ S S
Sbjct: 524 HTKTSFGRRKLKKWVTQPLLKLRDINARLDAISDVLHSESS------------------- 564
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PD++RG+ I+H+ + EF +++ + +LQ L
Sbjct: 565 -------VFEQIENLLRKLPDVERGLCSIYHKKCSTQEFFLIVKNLCQLKSELQALM--- 614
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ + S LL+ +L P ++ L +N++AA GD L F
Sbjct: 615 ----PAVNSHVQSDLLRARVLEV--PELLSPVEPYLKVLNEQAAKAGDKTELF-KDLSDF 667
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+ + + +Q + + RK L + +L++++VSG
Sbjct: 668 PLIKKRKNEIQEVIHSIQMHLQELRKILKLPSLQYVTVSG 707
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
E IITGPNMGGKS YI+QVAL+ IMAQ+GS+VPA A + ++DGI+TR
Sbjct: 712 ERVMIITGPNMGGKSSYIKQVALVVIMAQIGSYVPAEEATIGIVDGIFTR 761
>gi|433654964|ref|YP_007298672.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293153|gb|AGB18975.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 857
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 260/920 (28%), Positives = 444/920 (48%), Gaps = 137/920 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
YTP+ +Q ++K KY D +L +G + F +DA +AAK L I D A
Sbjct: 3 YTPMMEQYFKIKEKYKDSILFFRIGDFYEMFFDDAIIAAKELEIVLTGKDCGQDERAPMA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G+KV + +Q E A G R + ++T T+
Sbjct: 63 GVPFHAADFYIDKLVKKGYKVAICEQLEDPA------SAKGLVDRDVIRVFTPGTVINTN 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVG-KIRNGVFGDGFDVRLGVVAVEISTGDV--VYG 260
+ + NYL+ + D+ N G + + GD F ++ I D+ +Y
Sbjct: 117 SIEEKSN------NYLLSIFKDENNYGLSFVDVMTGDLFVTQI------IKCDDIRKIYD 164
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E ++ +P+E++ + VRV +S+ +I
Sbjct: 165 E-------------IMRYNPSEIIANND-----------FFSLKKLVRVINSSK-IYINK 199
Query: 321 GALAEVMSLYENMGED---TLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
YEN +D +SN +++++ E G +EG + A+++L +
Sbjct: 200 ---------YENNYQDFERIISNQFNKSLN--ELG-----LEG----KNYAIKSLTTVLI 239
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN-NSNGSEYGTLLHIMNHTL 436
+LK+ ++ L S M L NT++ LE++++ N N S GTLL +++ T+
Sbjct: 240 YLKELQKVQLSQLNNLTYYEDNSF-MLLDNNTIKNLEIVQSPNRNNSRDGTLLSVLDQTV 298
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G RLL+RW+ PL D I+ RLD+V E+ G+ D +N+
Sbjct: 299 TPMGGRLLKRWIEEPLIDIEKINLRLDSVDELFNDFK--------GRSDLRNA------- 343
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
L D++R +++ ++ + +++ +I ++L +
Sbjct: 344 ------------LKGIYDLERLSSKLVYQNINAKDLLSIKVSI-------ERLPKIKDLI 384
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
K S L LK L + ST KE II +G V
Sbjct: 385 SKYNSIYLKEIFLKLDTLQDICDLIEKSIKDDPSTSVKEGN---------IIKDGFDKNV 435
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVN 674
RKA + K + +L +++ G++ L+ + IE+ ++ VP N+ +
Sbjct: 436 DELRKAATNGKSWITNLELNEKERTGIKTLKVGYNKVFGYFIEVSKSYISSVPQNYIRKQ 495
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY +PE+ +++ A +L + ++S ++ Q + +A LD
Sbjct: 496 TLANAERYITPELKEIEEKILGAETKLVELEYEIFNSIREQIKNEINRIQMTSKYIAVLD 555
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L +LA ++ + N+V+P+ V+D + +I I GRHPV++TI+ D+F+ ND + E++
Sbjct: 556 VLTSLAMVAESNNYVKPI-VNDGD--RILIKDGRHPVIETIVDDSFISNDIEID-EKKPI 611
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS Y+RQVALI +MAQVGSFVPAS AE+ ++D I+TR+GASD + G+ST
Sbjct: 612 MIITGPNMAGKSTYMRQVALIVLMAQVGSFVPASYAEIGIVDRIFTRVGASDDLFSGQST 671
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+NE S IL + T +SL+I+DE+GRGTST+DG++IA A L+Y+ + K +F THY
Sbjct: 672 FMVEMNEVSVILNSATQKSLIILDEVGRGTSTYDGMSIACAILEYIHDKIKAKTMFATHY 731
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ ++ + G + Y++S +D +D+ + +L K++PG ++ S+G +VA+
Sbjct: 732 HELTKLEDQLNG-IKNYNIS----------VDETNDE-IIFLRKIIPGSADKSYGIQVAK 779
Query: 975 LAQLPPSCISRATVIAAKLE 994
LA LP I A I LE
Sbjct: 780 LAGLPNDVIDNAKKILNSLE 799
>gi|115397903|ref|XP_001214543.1| DNA mismatch repair protein msh6 [Aspergillus terreus NIH2624]
gi|114192734|gb|EAU34434.1| DNA mismatch repair protein msh6 [Aspergillus terreus NIH2624]
Length = 1206
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 264/973 (27%), Positives = 440/973 (45%), Gaps = 132/973 (13%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P T+ P S K++P E+Q E+K K+ D ++ + G + + D
Sbjct: 295 PGHPDYDPRTIYIPPLAWS------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 348
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA--HGP 180
A + ++ + N +P L+ + V G+K+ V Q E+A K
Sbjct: 349 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGYKIARVDQAESALGKEMRERD 408
Query: 181 GKAGP-----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNG 235
GK G R LS + T TL E + CV I+
Sbjct: 409 GKKGGKEDKVIRRELSCVLTAGTL--------VEGSMLHDDMSTFCVA--------IKEA 452
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTE 294
+ D G+ V+ +TG E D + E + P ELLL + +S +
Sbjct: 453 IIDDH--PAFGLAFVDTATGQFFMSELMDDADMTKFETFVAQTRPQELLLEKSTISPKAL 510
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
++L GP + ++ + + E+ ++ E +S ++D PE
Sbjct: 511 RILKNNTGPTTIWNYLKPGKEFWEADITVKEL-----DVSEYFVSEDDDNLKAWPEALR- 564
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQ 411
+ +L + A +++L+ L+R ++ +G + + + + + L TL
Sbjct: 565 ------VARDKELVMSAFGALVQYLRVLKLDRDLITIGNFSWYDPIKKASSLVLDGQTLI 618
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
+E+ N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 619 NMEIFANSFDGGSDGTLFQLLNRCITPFGKRMFKQWVCHPLVDAKKINARLDAV------ 672
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
D N+D ++ + QF SS LT + PD++R I+R+ +
Sbjct: 673 -------------DALNADPSVRD-QF----SSQLTKM---PDLERLISRVHAANCKAQD 711
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
F+ V++ +Q+ +LLK + S VIG+ +
Sbjct: 712 FLRVLEG-------FEQI-------------AYTMSLLKE---SGSGEGVIGQLINAMPN 748
Query: 592 VN------KEAADQGDLLN--LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
++ K A D+ + +++ G + ++ + +LD+L+ RK+LG
Sbjct: 749 LDDLLEYWKTAFDRSKARDNGILVPKLGVEEDFDNSQANISQLHNDLDNLLKRVRKELGS 808
Query: 644 RNLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
+ + + +E+P K +P NW ++++TK+ RY+ PE+ T + +L A E +
Sbjct: 809 TAICYRDNGKEIYQMEVPIKVKGIPKNWDQMSATKQVKRYYFPELRTLIRKLQEAQETHS 868
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL--ATLSRNKNFVRPVFVDDHEPV 760
+ + F F +YA + AAV+ ++ LDCL +L A+ S + RPVFVDD V
Sbjct: 869 QIVKEVAGRFYARFDEHYATWLAAVRIVSQLDCLISLAKASASLGQPSCRPVFVDDERSV 928
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
+ RHP L +D+F+PND L R ++TG N GKS +R + IMAQ
Sbjct: 929 -LEFEELRHPCL-VSSVDDFIPNDIQLGGVRPNIDLLTGANAAGKSTVLRMTCVAVIMAQ 986
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G ++P SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DEL
Sbjct: 987 IGCYLPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1046
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTS++DGVA+A A L ++ H + F THY +A T+F G H
Sbjct: 1047 GRGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---TEFEG------------HP 1091
Query: 941 VMGPMDSK-----SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
+ P K ++ +T+LYK+ GV+E SFG A + +P I RA V A + E
Sbjct: 1092 EIAPKRMKIHVDDEERRITFLYKLEDGVAEGSFGMHCAAMCGIPDKVIERAEVAAKQWEH 1151
Query: 996 EVSSRVQNRSAKR 1008
+SR++ +R
Sbjct: 1152 --TSRLKESLERR 1162
>gi|390934967|ref|YP_006392472.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570468|gb|AFK86873.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 857
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 254/914 (27%), Positives = 443/914 (48%), Gaps = 125/914 (13%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
YTP+ +Q +++K KY D +L +G + F +DA +A+K L I + A
Sbjct: 3 YTPMMEQYLKIKEKYKDSILFFRIGDFYEMFFDDAVIASKELEIVLTGKDCGQEERAPMA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G+KV + +Q E A G R + ++T T+
Sbjct: 63 GVPFHAADFYIDKLVKKGYKVAICEQLEDPAYAK------GLVERDVIRVFTPGTVINTN 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYL+ + + GDG+ G+ V++ TG++ +
Sbjct: 117 SLEEKSN------NYLLSIFKE------------GDGY----GLSFVDVLTGELFVTQIT 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ ++ SP+E++ + +K+ +++ +S+ FI
Sbjct: 155 KCNDIRKIYDEIMRYSPSEIIANSDFF-ELKKL----------IKILHSSK-VFI----- 197
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
N E L+N ED V HRS + + A+++LA + +LK+
Sbjct: 198 --------NKYEKVLNNAED----VITGQFHRSLKDLKLERKKYAIKSLASVLLYLKEMQ 245
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN-NSNGSEYGTLLHIMNHTLTIYGSR 442
+ L S M L NT++ LE++ + N + S+ GTLL +++ T+T G R
Sbjct: 246 KVELSQLNNLIYYEDNSF-MLLDNNTIRNLEIIYSINRDHSKSGTLLSVLDQTVTPMGGR 304
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LL+RW+ PL D I+ RLD+VSE+ Y+ G+ D ++ IL
Sbjct: 305 LLKRWLEEPLIDVEKINYRLDSVSEL---YNDYK-----GRSDIRD------------IL 344
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
+ D++R +++ ++ + +++ +I K Q L+ K S
Sbjct: 345 KGIY-------DLERLSSKLVYQNINAKDLLSIKISIERLPKLKQLLN-------KYNSN 390
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKA 622
L + +L +I K+ K + N + + II +G + R+A
Sbjct: 391 YLKE-IFTKLDTLQDIHDLIDKSIKDDPSSNVKEGN--------IIKDGFDKNIDELRRA 441
Query: 623 VQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKTI 680
K + +L +++ G++ L+ + IE+ ++ VP N+ + +
Sbjct: 442 SIDGKSWIANLEAYEKEKTGIKTLKIGYNKVFGYYIEVSKSYISSVPENYIRKQTLANAE 501
Query: 681 RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA 740
RY +PE+ +++ A +L + +DS ++ Q + +A LD L +LA
Sbjct: 502 RYITPELKDIEEKILGAETKLVELEYEIFDSIREQIKNEIYRIQMTSRHIAILDVLVSLA 561
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGP 800
T++ N+V+PV + +I I GRHPV++TI+ D+F+ ND + ++ IITGP
Sbjct: 562 TVAETNNYVKPVV---NGSDRIVIKDGRHPVIETIMDDSFISNDIEIDGKKP-IMIITGP 617
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NM GKS Y+RQVALI +MAQ+GSFVPAS AE+ V+D I+TR+GASD + G+STF+ E+N
Sbjct: 618 NMAGKSTYMRQVALIVLMAQIGSFVPASYAEIGVVDRIFTRVGASDDLFSGQSTFMVEMN 677
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
E S IL + T SL+I+DE+GRGTST+DG++IA A L+Y+ + K +F THY ++ ++
Sbjct: 678 EVSLILNSATKNSLIILDEVGRGTSTYDGMSIACAILEYIHDKIKAKTMFATHYHELTNL 737
Query: 921 KTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPP 980
+ K G + Y++S ++D ++ +L K++PG ++ S+G +VA+LA LP
Sbjct: 738 EDKLDG-IKNYNISV-----------EETDDEIIFLRKIIPGAADKSYGIQVAKLAGLPD 785
Query: 981 SCISRATVIAAKLE 994
+ A I LE
Sbjct: 786 EVVQNAKKILNNLE 799
>gi|350632200|gb|EHA20568.1| hypothetical protein ASPNIDRAFT_50490 [Aspergillus niger ATCC 1015]
Length = 1188
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 268/965 (27%), Positives = 440/965 (45%), Gaps = 120/965 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P+ P TL IP P + T K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 275 PEYDPRTLY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 328
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK--------A 177
++ + N +P L+ + V GFK+ V Q E+A K
Sbjct: 329 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRERDGKK 388
Query: 178 HGPGKAGPFGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNG 235
G + R LS++ T TL V G +D S Y CV I+
Sbjct: 389 GGGKEDKVIRRELSSVLTAGTL-----VEGSMLQDDM---STY--CVA--------IKEA 430
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTE 294
+ D G+ V+ +TG EF D + E + P ELLL + +S++
Sbjct: 431 LIDD--KPAFGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKAL 488
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
++L GP + ++ + + E+ + E +S ++D PE
Sbjct: 489 RILKNNTGPTTLWNYLKPVKEFWEADITVKEL-----DASEYFVSQDDDNLQAWPEALRE 543
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQ 411
E +M+ A +++L+ +ER ++ +G ++ + + + L TL
Sbjct: 544 ARDKELVMS-------AFGALVQYLRLLKIERDLITIGNFTAYDPIKKATSLVLDGQTLI 596
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
+E+ N+ +G GTL ++N +T +G R+ ++WV HPL D N I+ARLDAV
Sbjct: 597 NMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARLDAV------ 650
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
D N+D T+ + QF SS LT + PD++R I+R+ +
Sbjct: 651 -------------DALNADPTVRD-QF----SSQLTKM---PDLERLISRVHAANCKAQD 689
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
F+ V++ + L G E V + L + P + +
Sbjct: 690 FLRVLEGFEQIEYTMSLLKESGSAGEGVIGQ-----------LISGMPDLNELLEYWKTA 738
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSV 651
++ A + +L + G + +++ ++ +L+SL+ RK+LG + +
Sbjct: 739 FDRSKARENGIL---VPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDN 795
Query: 652 SGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ +E+P K +P NW ++++TK+ RY+ PE+ + QL A E + + +
Sbjct: 796 GKEIYQLEVPIKVKNIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAG 855
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGR 768
F F Y + AAV+ +A LDCL +LA S + + RPVFVDD V + R
Sbjct: 856 RFYARFDENYTTWLAAVRIVAQLDCLISLAKASSSLGQPSCRPVFVDDERSV-LEFEELR 914
Query: 769 HPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
HP L + + D F+PND L ++TG N GKS +R + IMAQ+G ++P
Sbjct: 915 HPCLISSVGD-FIPNDVQLGGTHANIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQ 973
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++D
Sbjct: 974 SARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYD 1033
Query: 889 GVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
GVA+A A L ++ H + F THY +A +F G H + P +
Sbjct: 1034 GVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEG------------HPEIAPKRMR 1078
Query: 949 -----SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++ VT+LYK+ GV+E SFG A + +P I RA V A + E +SR++
Sbjct: 1079 IHVDDEERRVTFLYKLEDGVAEGSFGMHCAAMCGIPDKVIERAEVAAKQWEH--TSRLKE 1136
Query: 1004 RSAKR 1008
+R
Sbjct: 1137 SLERR 1141
>gi|70994396|ref|XP_751995.1| DNA mismatch repair protein Msh6 [Aspergillus fumigatus Af293]
gi|66849629|gb|EAL89957.1| DNA mismatch repair protein Msh6, putative [Aspergillus fumigatus
Af293]
Length = 1213
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 264/967 (27%), Positives = 443/967 (45%), Gaps = 118/967 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P T+ P + K++P E+Q E+K K+ D ++ + G + + D
Sbjct: 298 PDHPDYDPRTIYIPPLAWA------KFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEND 351
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA---AIKAHG 179
A + ++ + N +P L+ + V GFK+ V Q+E+A ++
Sbjct: 352 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRERD 411
Query: 180 PGKAGP-----FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLV----CVVDDDGN 228
KAG R LS + T TL V G +D S Y V +VDD
Sbjct: 412 GKKAGGKEDKIIKRELSCVLTAGTL-----VEGSMLQDDM---STYCVAIKEAIVDD--- 460
Query: 229 VGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP 288
FG F V+ +TG EF D + E + P ELLL +
Sbjct: 461 -----RPAFGLAF--------VDTATGQFSLSEFVDDVDMTKFETFVAQTRPQELLLEKS 507
Query: 289 -LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD 347
+S++ ++L GP + ++ + + E+ + E +S ++D
Sbjct: 508 TISQKALRILKNNTGPTTIWNHLKPGKEFWEADITVKEL-----DASEYFVSQDDDNLQA 562
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMT 404
PE E +M+ A +++L+ L+R ++ +G + + + + +
Sbjct: 563 WPETLREARDKEMVMS-------AFGALVQYLRVLKLDRDLITIGNFSWYDPIRKASSLV 615
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L TL +E+ N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDA
Sbjct: 616 LDGQTLINMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDA 675
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
V D N+D ++ + QF SS LT + PD++R I+RI
Sbjct: 676 V-------------------DALNADSSVRD-QF----SSQLTKM---PDLERLISRIHA 708
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
+F+ V++ + L +G E V + L + P +
Sbjct: 709 ANCKAQDFVRVLEGFEQIEYTITLLKDNGSSSEGVIGQ-----------LISGMPDLSSL 757
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
+ ++ A + +L + G + +++ ++ +LD+L+ R++LG
Sbjct: 758 LEYWKTAFDRTKAKENGIL---VPKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGST 814
Query: 645 NLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+ + + +E+P K +P NW ++++TK+ RY+ PE+ + + +L A E +
Sbjct: 815 AICYRDNGKEIYQLEVPIKVKNIPKNWDQMSATKQVKRYYFPELRSLIRKLQEAQETHSQ 874
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQ 761
+ + F F Y + AAV+ ++ LDCL +LA S + RPVFV+D V
Sbjct: 875 IVKEVAGRFYARFDENYTTWLAAVRIISQLDCLISLAKASSSLGHPSCRPVFVEDERSV- 933
Query: 762 IHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQV 821
+ RHP L + + D F+PND L E ++TG N GKS +R + IMAQ+
Sbjct: 934 LEFEELRHPCLLSSVED-FIPNDVRLGGEVPNINLLTGANAAGKSTVLRMTCIAVIMAQI 992
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
G ++P SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELG
Sbjct: 993 GCYLPCRSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELG 1052
Query: 882 RGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV 941
RGTS++DGVA+A A L ++ H M F THY +A +F G +T ++
Sbjct: 1053 RGTSSYDGVAVAQAVLHHVATHIGAMGFFATHYHSLA---AEFDGH------PEITPKRM 1103
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
+D + ++ +T+LYK+ GV+E SFG A + +P I RA V A + E +SR+
Sbjct: 1104 KIHVDDE-ERRITFLYKLEDGVAEGSFGMHCASMCGIPNKVIERAEVAAKQWEH--TSRL 1160
Query: 1002 QNRSAKR 1008
+ +R
Sbjct: 1161 KESLERR 1167
>gi|304316821|ref|YP_003851966.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778323|gb|ADL68882.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 857
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 260/918 (28%), Positives = 440/918 (47%), Gaps = 133/918 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
YTP+ +Q ++K KY D +L +G + F +DA +AAK L I D A
Sbjct: 3 YTPMMEQYFKIKEKYKDSILFFRIGDFYEMFFDDAIIAAKELEIVLTGKDCGQDERAPMA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G+KV + +Q E A G R + ++T T+
Sbjct: 63 GVPFHAADFYIDKLVKKGYKVAICEQLEDPA------SAKGLVDRDVIRVFTPGTVINTN 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVG-KIRNGVFGDGFDVRLGVVAVEISTGDV--VYG 260
+ + NYL+ + D+ N G + + GD F ++ I D+ +Y
Sbjct: 117 SIEEKSN------NYLLSIFKDENNYGLSFVDVMTGDLFVTQI------IKCDDIRKIYD 164
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E ++ +P+E++ + VRV +S+ +I
Sbjct: 165 E-------------IMRYNPSEIIANND-----------FFSLKKLVRVINSSK-IYINK 199
Query: 321 GALAEVMSLYENMGEDTLSNNEDQ-NMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
YEN +D S +Q N + E G +EG + A+++L + +L
Sbjct: 200 ---------YENNYQDFESIISNQFNKSLNELG-----LEG----KNYAIKSLTTVLIYL 241
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN-NSNGSEYGTLLHIMNHTLTI 438
K+ ++ L S M L NT++ LE++++ N N S GTLL +++ T+T
Sbjct: 242 KELQKVQLSQLNNLTYYEDNSF-MLLDNNTIKNLEIVQSPNRNNSRDGTLLSVLDQTVTP 300
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL+RW+ PL D I+ RLD+V E+ G+ D +N+
Sbjct: 301 MGGRLLKRWIEEPLIDIEKINLRLDSVDELFNDFK--------GRSDLRNA--------- 343
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
L D++R +++ ++ + +++ +I ++L + K
Sbjct: 344 ----------LKGIYDLERLSSKLVYQNINAKDLLSIKVSI-------ERLPKIKDLISK 386
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
S L LK L + ST KE II +G V
Sbjct: 387 YNSIYLKEIFLKLDTLQDIYDLIDKSIKDEPSTSVKEGN---------IIKDGFDKNVDE 437
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNST 676
RKA + K + +L +++ G++ L+ + IE+ ++ VP N+ + +
Sbjct: 438 LRKAATNGKSWITNLELNEKERTGIKTLKVGYNKVFGYFIEVSKSYISSVPQNYIRKQTL 497
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
RY +PE+ +++ A +L + ++ ++ Q + +A LD L
Sbjct: 498 ANAERYITPELKEIEEKILGAETKLVELEYEIFNGIREQIKNEINRIQMTSKYIAVLDVL 557
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQI 796
+LA ++ + N+V+P+ V+D + +I I GRHPV++TI+ D+F+ ND + E++ I
Sbjct: 558 TSLAMVAESNNYVKPI-VNDGD--RILIKDGRHPVIETIVDDSFISNDIEID-EKKPIMI 613
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNM GKS Y+RQVALI +MAQVGSFVPAS AE+ ++D I+TR+GASD + G+STF+
Sbjct: 614 ITGPNMAGKSTYMRQVALIVLMAQVGSFVPASYAEIGIVDRIFTRVGASDDLFSGQSTFM 673
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
E+NE S IL + T +SL+I+DE+GRGTST+DG++IA A L+Y+ + K +F THY +
Sbjct: 674 VEMNEVSVILNSATQKSLIILDEVGRGTSTYDGMSIACAILEYIHDKIKAKTMFATHYHE 733
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ ++ + G + Y++S +D +D+ + +L K++PG ++ S+G +VA+LA
Sbjct: 734 LTKLENQLNG-IKNYNIS----------VDETNDE-IIFLRKIIPGSADKSYGIQVAKLA 781
Query: 977 QLPPSCISRATVIAAKLE 994
LP I A I LE
Sbjct: 782 GLPNDVIDNAKKILNSLE 799
>gi|159125092|gb|EDP50209.1| DNA mismatch repair protein Msh6, putative [Aspergillus fumigatus
A1163]
Length = 1213
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 265/967 (27%), Positives = 445/967 (46%), Gaps = 118/967 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P T+ P + K++P E+Q E+K K+ D ++ + G + + D
Sbjct: 298 PDHPDYDPRTIYIPPLAWA------KFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEND 351
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA---AIKAHG 179
A + ++ + N +P L+ + V GFK+ V Q+E+A ++
Sbjct: 352 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRERD 411
Query: 180 PGKAGP-----FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLV----CVVDDDGN 228
KAG R LS + T TL V G +D S Y V +VDD
Sbjct: 412 GKKAGGKEDKIIKRELSCVLTAGTL-----VEGSMLQDDM---STYCVAIKEAIVDD--- 460
Query: 229 VGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP 288
FG F V+ +TG EF D + E + P ELLL +
Sbjct: 461 -----RPAFGLAF--------VDTATGQFSLSEFVDDVDMTKFETFVAQTRPQELLLEKS 507
Query: 289 -LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD 347
+S++ ++L GP + ++ + + E+ + E +S ++D
Sbjct: 508 TISQKALRILKNNTGPTTIWNHLKPGKEFWEADITVKEL-----DASEYFVSQDDDNLQA 562
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMT 404
PE R A + +L + A +++L+ L+R ++ +G + + + + +
Sbjct: 563 WPE--TLREARDK-----ELVMSAFGALVQYLRVLKLDRDLITIGNFSWYDPIRKASSLV 615
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L TL +E+ N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDA
Sbjct: 616 LDGQTLINMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDA 675
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
V D N+D ++ + QF SS LT + PD++R I+RI
Sbjct: 676 V-------------------DALNADSSVRD-QF----SSQLTKM---PDLERLISRIHA 708
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
+F+ V++ + L +G E V + L + P +
Sbjct: 709 ANCKAQDFVRVLEGFEQIEYTITLLKDNGSSSEGVIGQ-----------LISGMPDLSSL 757
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
+ ++ A + +L + G + +++ ++ +LD+L+ R++LG
Sbjct: 758 LEYWKTAFDRTKAKENGIL---VPKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGST 814
Query: 645 NLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+ + + +E+P K +P NW ++++TK+ RY+ PE+ + + +L A E +
Sbjct: 815 AICYRDNGKEIYQLEVPIKVKNIPKNWDQMSATKQVKRYYFPELRSLIRKLQEAQETHSQ 874
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQ 761
+ + F F Y + AAV+ ++ LDCL +LA S + RPVFV+D V
Sbjct: 875 IVKEVAGRFYARFDENYTTWLAAVRIISQLDCLISLAKASSSLGHPSCRPVFVEDERSV- 933
Query: 762 IHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQV 821
+ RHP L + + D F+PND L E ++TG N GKS +R + IMAQ+
Sbjct: 934 LEFEELRHPCLLSSVED-FIPNDVRLGGEVPNINLLTGANAAGKSTVLRMTCIAVIMAQI 992
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
G ++P SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELG
Sbjct: 993 GCYLPCRSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELG 1052
Query: 882 RGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV 941
RGTS++DGVA+A A L ++ H M F THY +A +F G +T ++
Sbjct: 1053 RGTSSYDGVAVAQAVLHHVATHIGAMGFFATHYHSLA---AEFDGH------PEITPKRM 1103
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
+D + ++ +T+LYK+ GV+E SFG A + +P I RA V A + E +SR+
Sbjct: 1104 KIHVDDE-ERRITFLYKLEDGVAEGSFGMHCASMCGIPNKVIERAEVAAKQWEH--TSRL 1160
Query: 1002 QNRSAKR 1008
+ +R
Sbjct: 1161 KESLERR 1167
>gi|327350733|gb|EGE79590.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis ATCC
18188]
Length = 1244
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 281/1023 (27%), Positives = 458/1023 (44%), Gaps = 149/1023 (14%)
Query: 32 PQQTPPPKIAATVSFSPA---KRKVVSSLFPPKT---------------PKKPKLSPHTL 73
P T PPK A V+ + K+KV + + P+ P P P T+
Sbjct: 277 PNDTEPPKPRAAVTRNAVPGEKKKVKAHMSEPEQRYPWLANITDIDRNPPGHPDYDPRTI 336
Query: 74 NPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY 133
P S K++P E+Q E+K K+ D ++ + G + + DA + ++ +
Sbjct: 337 YIPPLAWS------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 390
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------AIKAHG-PGKAG 184
N +P L+ + V GFK+ V Q+E+A K +G PGK
Sbjct: 391 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREKQGKTNGTPGKQD 450
Query: 185 P-FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF 241
R L+ + T TL V G +D S Y V I+ + D
Sbjct: 451 KIIRRELACVLTSGTL-----VDGSMLQDDM---STYCVA----------IKEALVNDL- 491
Query: 242 DVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAY 300
G+ V+ +TG EF D + E + P ELLL + +S + ++L
Sbjct: 492 -PAFGIAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELLLEKSVMSTKALRILKNN 550
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
GP + ++ + + E+ + +S++ D PE H E
Sbjct: 551 TGPTTLWNYLKPCKEFWEADITVREL-----DASNYFVSDDGDNIEAWPEALRHARDKEF 605
Query: 361 IMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQLEVLR 417
+M+ A +++LK +ER ++ +G + + + + L TL LE+
Sbjct: 606 VMS-------AFGALVQYLKMLKIERDLITIGNFTWYDPIKKATSLVLDGQTLINLEIFS 658
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N+ +G + GTL ++N T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 659 NSFDGGQEGTLFQLLNRCTTPFGKRMFKQWVCHPLMDTKKINARLDAV------------ 706
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
D N+D +I + QF SS LT + PD++R I+R+ R+ +F+ V++
Sbjct: 707 -------DALNADRSI-QNQF----SSQLTKM---PDLERLISRVHARSCKAQDFLRVLE 751
Query: 538 A---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
I YA L++ GE ++ +L+ AS P + G + ++
Sbjct: 752 GFEQIDYAMGLLKETG-PGE------------GVIGQLV--ASMPDLSGHLQYWKTAFDR 796
Query: 595 -EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+A D G +++ G + + + + +LD L+ RKQLG + +
Sbjct: 797 TKAKDSG----ILVPEAGVEEDFDASHDRISEIESDLDQLLKKVRKQLGSNAIVYRDNGK 852
Query: 654 ITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+ +E+P K VP +W ++++TK+ R++ E+ + + +L A E + + + F
Sbjct: 853 EIYQLEVPIKIKNVPKSWDQMSATKQAKRFYFAELRSLIRELQEAQETHSQIVKEVAGRF 912
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSGRHP 770
F Y+ + AAV+ +A LDCL +LA S + RPVFVDD V + RHP
Sbjct: 913 YARFDENYSTWLAAVRVIAQLDCLISLARASSALGYPSCRPVFVDDERSV-LEFEELRHP 971
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+ + D F+PND L ++TG N GKS +R IMAQ+G VP SA
Sbjct: 972 CMLPNVGD-FIPNDVKLGGNSPNINLLTGANAAGKSTILRMTCTAVIMAQIGCHVPCKSA 1030
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +D + +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGV
Sbjct: 1031 RLTPVDRVMSRLGANDNIFASQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGV 1090
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK-- 948
A+A A L ++ H + F THY + +F G H + P +
Sbjct: 1091 AVAQAVLHHVATHIGALGFFATHYHSLT---AEFEG------------HPEIAPRRMRIH 1135
Query: 949 ---SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRS 1005
++ VT+LYK+ GV+E SFG A + +P + RA V A + E +SR++
Sbjct: 1136 VDDEEKRVTFLYKLEDGVAEGSFGMHCASMCGIPDKVVERAEVAAKQWEH--TSRLKESL 1193
Query: 1006 AKR 1008
+R
Sbjct: 1194 ERR 1196
>gi|429849425|gb|ELA24817.1| DNA mismatch repair protein msh6 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1294
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 268/927 (28%), Positives = 418/927 (45%), Gaps = 111/927 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K++P E+Q E+K K D ++ + G + + DA + ++ + N +P
Sbjct: 408 KFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPE 467
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
L++ V + V G+KV V Q E+A K RG T A + A+ +
Sbjct: 468 SSLDMWVNQFVAKGYKVARVDQMESALGKEMR-------ERG----DTSAKAKKADKIIR 516
Query: 208 GEDGCGGESNYLV--CVVDDD--GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
E C LV ++ DD I+ V DG G+ V+ +TG EF
Sbjct: 517 RELACVLTGGTLVDGSMLQDDLATFCACIKESVI-DGSPA-FGITFVDCATGQFFISEFE 574
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQP---------LSKQTEKM-LLAYAGPASNVRVECAS 313
D + E + SP EL+L + L T M + Y PA+ S
Sbjct: 575 DDADLTKFETFVAQTSPRELILEKSRISTKALRILKNNTSPMTIWNYLKPATEFLDADMS 634
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA 373
R GG A GE+T + Q D DL + +L
Sbjct: 635 RREISSGGYFAN------EDGEETWPDALAQAKD-----------------KDLLMSSLG 671
Query: 374 LTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
I +LK +E + +F + + + L TL LE+ N NG GTL
Sbjct: 672 GLIHYLKFLKIEGSLLSQGNFEWYTPIRRNGTLILDGQTLINLEIFANTVNGGPEGTLFT 731
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
++N +T +G RL R+WV HPLCD I+ RLDAV D NSD
Sbjct: 732 LLNRCVTPFGKRLFRQWVCHPLCDIKRINERLDAV-------------------DMLNSD 772
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
++ E QF SS +T + PD++R I+RI P +F+ V++ + L
Sbjct: 773 RSVRE-QF----SSQMTKM---PDLERLISRIHATLCKPEDFVRVLEGFEQIEYTMGLLG 824
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN-KEAADQGDLLNLMIIS 609
G + L+ RL+ AS P + + + + K+A D+ L+I
Sbjct: 825 AFGG----------GNGLIDRLL--ASMPNLNEPLSYWKTAFDRKKARDE----KLLIPE 868
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLN 669
G + ++ ++ KEEL SL+ + +L + ++F + + IE P KVP N
Sbjct: 869 RGIEEDFDNSQDRIEEIKEELQSLLGRKKSELKCKTIKFTDIGKEIYQIEAPKAVKVPNN 928
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W ++++T RY+ E+ + +L A E + + + F + F Y + +++
Sbjct: 929 WRQMSATASVKRYYFEELTDLVRELQEAEETHSQIVKEVATRFFQRFDADYDTWSQSIRI 988
Query: 730 LAALDCLHAL--ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNL 787
++ LDCL +L A+ S + RP FVD+ V + RHP + + D F+PND L
Sbjct: 989 ISQLDCLVSLSKASSSLGEPSCRPEFVDEDRSV-VEFEELRHPCMLNTVSD-FIPNDVKL 1046
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ ++TG N GKS +R + IMAQ+G +VPA SA L +D I +R+GA+D+
Sbjct: 1047 GGDSAKINLLTGANAAGKSTVLRMSCVAVIMAQIGCYVPAVSARLTPVDRIMSRLGANDN 1106
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
I +STF EL+E IL T +SLVI+DELGRGTS++DGVA+A A L ++ H C+
Sbjct: 1107 IFASQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHVGCV 1166
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
F THY +A T+F + ++ +D + ++ VT+LYK+ GV+E S
Sbjct: 1167 GFFATHYHSLA---TEFENH------PEIVPRRMQIHVD-EEERRVTFLYKLEEGVAEGS 1216
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLE 994
FG A + + I RA V A + E
Sbjct: 1217 FGMHCAAMCGISNRVIERAEVAAKEWE 1243
>gi|396468500|ref|XP_003838188.1| hypothetical protein LEMA_P117120.1 [Leptosphaeria maculans JN3]
gi|312214755|emb|CBX94709.1| hypothetical protein LEMA_P117120.1 [Leptosphaeria maculans JN3]
Length = 1288
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 268/951 (28%), Positives = 435/951 (45%), Gaps = 116/951 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL P Q ++P E+Q E+K+K+ D ++ + G + + +DA +
Sbjct: 378 PDYDPRTLYIPPGAWDQ------FSPFERQYWEIKSKFWDTIVFFKKGKFYELYEKDATI 431
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK--------- 176
++ + N +P L++ + V G KV V Q E+A K
Sbjct: 432 GHQLFDLKLTDRVNMRMVGVPEASLDLWAAQFVANGHKVARVDQMESALAKEMRERDDVG 491
Query: 177 --AHGPGKAGP-FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
+ G K R L+A+ T TL D G + S Y + V + D R
Sbjct: 492 EKSKGSKKLDKVIRRELAAVLTSGTLV---DAGMLQSDM---STYCMAVKEID------R 539
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
+ + GV V+ +T EF D + E ++ + P ELLL + LS +
Sbjct: 540 DNLPA------FGVAFVDTATAQFQLCEFTDDIDMTKFETLIAQMRPGELLLEKSCLSAK 593
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
++L P++ ++ + + E+ + N E +N + V +
Sbjct: 594 AMRILKNNTAPSTIWNTLKPIKEFWPADTTIREIDA--NNYFESPTEHNIEAWPPVLREA 651
Query: 353 NHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANT 409
+ +L + A +++L+ +ER + +F+ + + + L +
Sbjct: 652 REQ----------ELVMSAFGALLQYLRTLKIERDLVTLGNFQWYDPIRKATSLVLDGQS 701
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LEV N +GS GTL ++N +T +G RLLR+WV HPL D I+ARLDAV
Sbjct: 702 LINLEVFANTFDGSSEGTLFAMLNRCITPFGKRLLRQWVCHPLADAQKINARLDAV---- 757
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
D N+D T+++ S +SL + PD++R I+R+
Sbjct: 758 ---------------DALNADSTVMD--------SFSSSLSKLPDLERLISRVHALRCRA 794
Query: 530 SEFIAVMQA---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
+F+ V++ I Y L+Q DGE ++ +LI +S P + +
Sbjct: 795 QDFLKVLEGFEQIEYTISLLRQFG-DGE------------GVIGQLI--SSMPDLNTALS 839
Query: 587 KLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
K S ++ A + +L + G + + ++S + ++D L+ RK LG +
Sbjct: 840 KWKSAFDRNVAKKEGIL---VPELGIEEDFDNSLAEIESCRADMDVLLKKARKDLGCNTI 896
Query: 647 EFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCR 706
F +E+P KVP +W ++++T K RY+SPE+ + +L A E + R
Sbjct: 897 CFRDNGKEICQLEVPKKVKVPSSWDQMSATAKVTRYYSPELRKLVRKLQEAQEIHGQITR 956
Query: 707 AAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIHI 764
F K F Y + AAV+ +A LDCL +LA + S + RPVF + V I +
Sbjct: 957 EVATRFCKRFDEDYKTWLAAVKIIAQLDCLISLAKASASLGEPSCRPVFEEGDRTV-IQL 1015
Query: 765 CSGRHP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
RHP +L+T+ +F+PND L + ++TG N GKS +R + I+AQVG
Sbjct: 1016 EELRHPCMLNTV--GDFIPNDIKLGGDTANISLLTGANAAGKSTILRMTCIAVILAQVGC 1073
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
++P +SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRG
Sbjct: 1074 YLPCTSARLMPVDRIMSRLGANDNIFAAQSTFFVELSETQKILSEATPRSLVILDELGRG 1133
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
TS++DGVA+A A L + C+ F THY +A + +F V + ++
Sbjct: 1134 TSSYDGVAVAQAVLHDISTRVGCVGFFATHYRSLAK-EFEFHPEVQNKRM------RIHV 1186
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
DSKS +T+LYK+ GV+E SFG A + +P I A A K E
Sbjct: 1187 DDDSKS---ITFLYKLEEGVAEGSFGMHCAAMCGIPSKVIQTAEKAARKWE 1234
>gi|189201826|ref|XP_001937249.1| DNA mismatch repair protein mutS [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984348|gb|EDU49836.1| DNA mismatch repair protein mutS [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1192
Score = 313 bits (803), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 265/943 (28%), Positives = 438/943 (46%), Gaps = 116/943 (12%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
+K + E+Q E+K+K+ D ++ + G + + +DA + ++ + N +P
Sbjct: 295 EKLSAFEKQYWEIKSKWWDTVVFFKKGKFYELYEKDATIGHQLFDLKLTDRVNMRMVGVP 354
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETA--------------AIKAHGPGKAGPFGRGLSA 192
L++ + V AG+KV V Q E+A KA G + R L+
Sbjct: 355 EASLDMWATQFVAAGYKVARVDQMESALGKEMRERDDKGKTPKKAAGGKENKVIRRELAT 414
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
+ T TL D G + S Y + + + D R+ + GV V+
Sbjct: 415 VLTSGTLV---DTGMLQSEM---STYCMAIKEID------RDNLPA------FGVAFVDT 456
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVEC 311
+T EF D + E ++ + P ELLL + +S + ++L P +
Sbjct: 457 ATAQFQLCEFTDDVDMTKFETLIAQMRPGELLLEKSCVSAKVLRILKNNTPPTTIWNWLK 516
Query: 312 ASRDCFIGGGALAE--VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
+++ + A+ E V + +E+ ED + + EQ +L +
Sbjct: 517 PNKEFWPADIAIRELEVNNYFESPTEDNIEAWPAVLREAREQ--------------ELVM 562
Query: 370 QALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
A +++L+ +ER + +F+ + + + L +L LE+ N +GS G
Sbjct: 563 SAFGALLQYLRTLMIERDLVTLGNFQWYDPIRKATSLVLDGQSLINLEIFANTFDGSAEG 622
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
TL ++N +T +G RLLR+WV HPL D I+ARLDAV D
Sbjct: 623 TLFAMLNRCITPFGKRLLRQWVCHPLADAAKINARLDAV-------------------DA 663
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA---ILYAG 543
N+D +I++ + +SL + PD++R I+R+ +F+ V++ I Y
Sbjct: 664 LNADSSIMD--------NFSSSLSKLPDLERLISRVHAGRCRAQDFLKVLEGFEQIEYTI 715
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
L+Q DGE ++ +LI +S P + AK S ++ A + LL
Sbjct: 716 SLLKQFG-DGE------------GVIGQLI--SSMPDLGTSLAKWTSAFDRNIARKEGLL 760
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
I G + +++ V++ K +LD L+ RK+LG +++ + + +E+P
Sbjct: 761 ---IPEPGIEEDFDNSQERVEACKADLDVLLKKARKELGSNAVQYNDIGKEIYQLEVPKK 817
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
KVP +W ++++T K RY+SPE+ + L A E + R F + F Y +
Sbjct: 818 VKVPNSWDQMSATAKVTRYYSPELRKLVRALQEAQETHGQITREVATRFCQRFDEDYKVW 877
Query: 724 QAAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
AAV+ +A LDCL +LA + S + RPVF + V + RHP + + D F+
Sbjct: 878 LAAVKIIAQLDCLISLAKASASLGEPSCRPVFEEGKRTV-VEFEELRHPCMLNTVAD-FI 935
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND L + ++TG N GKS +R + I+AQVG ++P +SA L +D I +R
Sbjct: 936 PNDIRLGGDGANISLLTGANAAGKSTILRMTCIAVILAQVGCYLPCTSARLTPVDRIMSR 995
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGVA+A A L +
Sbjct: 996 LGANDNIFAAQSTFFVELSETQKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHDIS 1055
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
C+ F THY +A + +F V + ++ DSKS +T+LYK+
Sbjct: 1056 TRVGCVGFFATHYRSLAK-EFEFHPEVQNKRM------RIHVDDDSKS---ITFLYKLEE 1105
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNR 1004
GV+E SFG A + +P I A A E E +SR+ R
Sbjct: 1106 GVAEGSFGMHCAAMCGIPKKVIENAE--KAAREWEHTSRLGER 1146
>gi|302502899|ref|XP_003013410.1| hypothetical protein ARB_00228 [Arthroderma benhamiae CBS 112371]
gi|291176974|gb|EFE32770.1| hypothetical protein ARB_00228 [Arthroderma benhamiae CBS 112371]
Length = 1217
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 271/967 (28%), Positives = 441/967 (45%), Gaps = 121/967 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL IP P + T K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 300 PDYDPRTLY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYENDATI 353
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------AIKA 177
++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 354 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKG 413
Query: 178 HGPGKAGP----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
+ GKA R L+ + T TL + G S Y CV I+
Sbjct: 414 NKMGKAQKEDKVIKRELACVLTTGTLVEGSMIQGDM------STY--CVA--------IK 457
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
+ DG G+ V+ +TG +F D + E + P ELLL + +S +
Sbjct: 458 EAII-DGLPA-FGISFVDTATGQFFLSQFVDDVDMTRFETFVAQTRPQELLLEKSVMSTK 515
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD--VPE 350
++L GP + L + + E ++ E D V E
Sbjct: 516 ALRILKNNTGPTT-----------------LWNYLKPGKEFWEADVTVRELDAGDYFVSE 558
Query: 351 QGNHRSAIEGIMNM---PDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMT 404
NH SA + DL + A +++L+ + R ++ +G + + + +
Sbjct: 559 DKNHASAWPQALQDARDKDLVMSAFGALLQYLEMLKIGRDLITIGNFTWYDPIKKASSLV 618
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L TL LE+ N +GS GTL ++N +T +G RL ++WV HPL D I+ARLDA
Sbjct: 619 LDGQTLINLEIFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLDA 678
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
V + N+D T+ E QF SS LT + PD++R I+R+
Sbjct: 679 VESL-------------------NADSTVRE-QF----SSQLTKM---PDLERLISRVHA 711
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
T +F+ V++ +Q++ + G +E + L L+ ++ P + G
Sbjct: 712 GTCKAQDFVRVLEGF----EQIE--YTMGLLKEAGSGHGLIGQLI------SAMPDLNGL 759
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
+ ++ A + D+L + G E ++K ++ ++EL+ ++ RK+L
Sbjct: 760 LKFWETAFDRAKARESDIL---VPEEGIEEEFDASKKNIEQLEDELEQVLQRTRKELKCS 816
Query: 645 NLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+ F + +E+P K +P +W ++++TK+ RY+ PE+ + +L A E
Sbjct: 817 TIVFKDNGKEIYQLEVPIKIKNIPKSWDQMSATKQVKRYYFPELRALIRKLQEARETHAQ 876
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQ 761
V + F F Y+ + AAV+ +A LDCL LA S RP+FVDD V
Sbjct: 877 VVKGVAGRFYARFDKDYSSWLAAVKIIAQLDCLIGLAKASTALGHPSCRPIFVDDERSV- 935
Query: 762 IHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQV 821
+ RHP + + D F+PND L + ++TG N GKS +R IMAQ+
Sbjct: 936 LDFQELRHPCMMPNVGD-FIPNDVKLGGDTSNINLLTGANAAGKSTVLRMTCTAVIMAQI 994
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
G +VP A L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELG
Sbjct: 995 GCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELG 1054
Query: 882 RGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV 941
RGTS++DGVA+A A L ++ H + F THY +A +F G + + ++
Sbjct: 1055 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEGH------PEIAARRM 1105
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
+D +++ VT+LYK+ GV+E SFG A + +P + A V A + E +SR+
Sbjct: 1106 RIHVDD-AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEVAAKQWEH--TSRM 1162
Query: 1002 QNRSAKR 1008
+ KR
Sbjct: 1163 KESLEKR 1169
>gi|344203223|ref|YP_004788366.1| DNA mismatch repair protein mutS [Muricauda ruestringensis DSM 13258]
gi|343955145|gb|AEM70944.1| DNA mismatch repair protein mutS [Muricauda ruestringensis DSM 13258]
Length = 873
Score = 313 bits (802), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 286/977 (29%), Positives = 441/977 (45%), Gaps = 194/977 (19%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMT 142
KK TPL QQ +K K+PD LL+ VG + FGEDA AAK+LGI +N
Sbjct: 8 KKVTPLMQQYNAIKVKHPDALLLFRVGDFYETFGEDAVKAAKILGIILTHRNNGGDKTEL 67
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEA 201
A P LN ++ +LV AG +V + Q E P + RG++ L T
Sbjct: 68 AGFPHHSLNTYLPKLVKAGQRVAICDQLE-------DPKQTKSIVKRGVTELVTPG---- 116
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V +D +SN +C V FG +LGV ++ISTG+ + E
Sbjct: 117 ---VALNDDILSAKSNNFLCAVH------------FGRN---KLGVSFLDISTGEYLTSE 158
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
G + ++ +L + SP E+L+ + K VEC
Sbjct: 159 ---GSVEQ-VDKLLQNFSPNEVLVSKSHKKDF---------------VECFGNQFH---S 196
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
E E+ E++L NH + LK
Sbjct: 197 FFLEDWIFQEDYAEESL--------------NHH------------------FGTKTLKG 224
Query: 382 FGLER----IMCLGASFRSLSGSMEMTLS-ANTLQQLE----------VLRN----NSNG 422
FG++ I+ GA LS + L N +Q++ +RN NS+
Sbjct: 225 FGIDHLNHGIIASGAVLHYLSETQHSRLQHINKIQRIAEEEYVWMDRFTIRNLELYNSSH 284
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
TLL I++ T++ G RLL+RW+ PL + I R VS +
Sbjct: 285 QNAVTLLDIIDKTISPMGGRLLKRWLALPLKNVEKIQQRHQVVSYL-------------- 330
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--L 540
K+ D + + Q Y + +G D++R I+++ P E + + ++ +
Sbjct: 331 ----KDEDEALGKIQGY------IKQMG---DLERLISKLATGKINPKEVVQLKNSLEAV 377
Query: 541 YAGKQLQQLHIDGEYR---EKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA 596
KQL Q + + E++ + L S + + +L +P I K +
Sbjct: 378 VPIKQLAQNSTNNSLKNIGERLNDCEALRSKI--KEVLNEEAPVNIAKGS---------- 425
Query: 597 ADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
I+ G E+ R S+K+ LD ++ K+ G+ +L+ S + +
Sbjct: 426 ----------TIAQGYSEELDELRGLAFSSKDYLDQMLQRETKETGITSLKIASNNVFGY 475
Query: 657 LIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
IE+ KVP +W + + RY + E+ ++ A E + ++ + ++ L
Sbjct: 476 YIEVRNTHKDKVPESWIRKQTLVNAERYITEELKEYESKILGAEERIYLLEQQLFEQLLV 535
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
Y A Q Q +A LDCL A L++ N+V PV D I I GRHPV++
Sbjct: 536 WMQEYIAPVQLNAQLIAQLDCLCGFAQLAKENNYVEPVVND---STDIDIKEGRHPVIEK 592
Query: 775 ILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
L D +V ND L+ E + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA+ A L
Sbjct: 593 QLPIGDAYVTNDVLLNREEQQIIMITGPNMSGKSALLRQTALIVLLAQMGSFVPATEANL 652
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
V+D I+TR+GASD+I G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++I
Sbjct: 653 GVVDKIFTRVGASDNISMGESTFMVEMNETASILNNLSERSLVLLDEIGRGTSTYDGISI 712
Query: 893 AYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
A+A +YL EH K LF THY ++ ++ T F+ + Y+VS +
Sbjct: 713 AWAISEYLHEHPAKAKTLFATHYHELNEMTTTFS-RIKNYNVSV-----------KELKD 760
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL 1011
+V +L K+VPG SE SFG VA++A +P I +A I KLE SS
Sbjct: 761 NVLFLRKLVPGGSEHSFGIHVAKMAGMPQQVIQKANKILKKLEKSHSSE----------- 809
Query: 1012 VKLSDQEQEAQENMPVS 1028
+++D+ Q +Q M +S
Sbjct: 810 -EMTDKLQASQSEMQLS 825
>gi|330923791|ref|XP_003300375.1| hypothetical protein PTT_11611 [Pyrenophora teres f. teres 0-1]
gi|311325500|gb|EFQ91520.1| hypothetical protein PTT_11611 [Pyrenophora teres f. teres 0-1]
Length = 1214
Score = 313 bits (802), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 264/942 (28%), Positives = 437/942 (46%), Gaps = 116/942 (12%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K + E+Q E+K+K+ D ++ + G + + +DA + ++ + N +P
Sbjct: 318 KLSAFEKQYWEIKSKWWDTVVFFKKGKFYELYEKDATIGHQLFDLKLTDRVNMRMVGVPE 377
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETA--------------AIKAHGPGKAGPFGRGLSAL 193
L++ + V AG+KV V Q E+A KA G + R L+ +
Sbjct: 378 ASLDMWATQFVAAGYKVARVDQMESALGKEMRERDDKGKTPKKAAGGKENKVIRRELATV 437
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T TL D G + S Y + + + D R+ + GV V+ +
Sbjct: 438 LTSGTLV---DTGMLQSEM---STYCMAIKEID------RDNLPA------FGVAFVDTA 479
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECA 312
T EF D + E ++ + P ELLL + +S + ++L P +
Sbjct: 480 TAQFQLCEFTDDVDMTKFETLIAQMRPGELLLEKSCVSAKVLRILKNNTPPTTIWNWLKP 539
Query: 313 SRDCFIGGGALAEVMS--LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+++ + A+ E+ + +E+ ED + + EQ +L +
Sbjct: 540 NKEFWPADIAIRELEANNYFESPTEDNIEAWPAVLREAREQ--------------ELVMS 585
Query: 371 ALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
A +++L+ +ER + +F+ + + + L +L LE+ N +GS GT
Sbjct: 586 AFGALLQYLRTLMIERDLVTLGNFQWYDPIRKATSLVLDGQSLINLEIFANTFDGSTEGT 645
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
L ++N +T +G RLLR+WV HPL D I+ARLDAV D
Sbjct: 646 LFAMLNRCITPFGKRLLRQWVCHPLADAAKINARLDAV-------------------DAL 686
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA---ILYAGK 544
N+D TI++ + +SL + PD++R I+R+ +F+ V++ I Y
Sbjct: 687 NADSTIMD--------NFSSSLSKLPDLERLISRVHAGRCRAQDFLKVLEGFEQIEYTIS 738
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
L+Q +GE ++ +LI +S P + AK S ++ A + LL
Sbjct: 739 LLKQFG-NGE------------GVIGQLI--SSMPDLATALAKWTSAFDRNIARKEGLL- 782
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
I G + +++ V++ K +LD L+ RK+LG +++ + + +E+P
Sbjct: 783 --IPEPGIEEDFDNSQERVEACKADLDVLLKKARKELGSNAVQYNDIGKEIYQLEVPKKV 840
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
KVP +W ++++T K RY+SPE+ + L A E + R F + F Y +
Sbjct: 841 KVPKSWDQMSATAKVTRYYSPELRKLVRALQEAQETHGQITREVATRFCQRFDEDYKVWL 900
Query: 725 AAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVP 782
AAV+ +A LDCL +LA + S + RPVF + V + RHP + + D F+P
Sbjct: 901 AAVKIIAQLDCLISLAKASASLGEPSCRPVFEEGKRTV-VEFEELRHPCMLNTVAD-FIP 958
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND L + ++TG N GKS +R + I+AQVG ++P +SA L +D I +R+
Sbjct: 959 NDIRLGGDGANISLLTGANAAGKSTILRMTCIAVILAQVGCYLPCTSARLTPVDRIMSRL 1018
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGVA+A A L +
Sbjct: 1019 GANDNIFAAQSTFFVELSETQKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHDIST 1078
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
C+ F THY +A + +F V + ++ DSKS +T+LYK+ G
Sbjct: 1079 RVGCVGFFATHYRSLAK-EFEFHPEVENKRM------RIHVDDDSKS---ITFLYKLEEG 1128
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNR 1004
V+E SFG A + +P I A A E E +SR+ R
Sbjct: 1129 VAEGSFGMHCAAMCGIPKKVIENAE--KAAREWEHTSRLGER 1168
>gi|358366152|dbj|GAA82773.1| DNA mismatch repair protein Msh6 [Aspergillus kawachii IFO 4308]
Length = 1210
Score = 313 bits (801), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 267/965 (27%), Positives = 440/965 (45%), Gaps = 120/965 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P+ P TL IP P + T K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 297 PEYDPRTLY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 350
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK--------A 177
++ + N +P L+ + V GFK+ V Q E+A K
Sbjct: 351 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRERDGKK 410
Query: 178 HGPGKAGPFGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNG 235
G + R LS++ T TL V G +D S Y CV I+
Sbjct: 411 GGGKEDKVIRRELSSVLTAGTL-----VEGSMLQDDM---STY--CVA--------IKEA 452
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTE 294
+ D G+ V+ +TG EF D + E + P ELLL + +S++
Sbjct: 453 LIDDK--PAFGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKAM 510
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
++L GP + ++ + + E+ + E +S ++D PE
Sbjct: 511 RILKNNTGPTTLWNHLKPVKEFWEADITVKEL-----DASEYFVSQDDDNLQAWPEALRE 565
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQ 411
E +M+ A +++L+ ++R ++ +G ++ + + + L TL
Sbjct: 566 ARDKELVMS-------AFGALVQYLRLLKIDRDLITIGNFTAYDPIKKATSLVLDGQTLI 618
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
+E+ N+ +G GTL ++N +T +G R+ ++WV HPL D N I+ARLDAV
Sbjct: 619 NMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARLDAV------ 672
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
D N+D T+ + QF SS LT + PD++R I+R+ +
Sbjct: 673 -------------DALNADPTVRD-QF----SSQLTKM---PDLERLISRVHAANCKAQD 711
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
F+ V++ + L G E V + L + P + +
Sbjct: 712 FLRVLEGFEQIEYTMSLLKESGSAGEGVIGQ-----------LISGMPDLNDLLEYWKTA 760
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSV 651
++ A + +L + G + +++ ++ +L+SL+ RK+LG + +
Sbjct: 761 FDRSKARENGIL---VPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDN 817
Query: 652 SGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ +E+P K +P NW ++++TK+ RY+ PE+ + QL A E + + +
Sbjct: 818 GKEIYQLEVPIKVKNIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAG 877
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGR 768
F F Y + AAV+ +A LDCL +LA S + + RPVFVDD V + R
Sbjct: 878 RFYARFDENYTTWLAAVRIVAQLDCLISLAKASSSLGQPSCRPVFVDDERSV-LEFEELR 936
Query: 769 HPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
HP L + + D F+PND L ++TG N GKS +R + IMAQ+G ++P
Sbjct: 937 HPCLISSVGD-FIPNDVQLGGTHANIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQ 995
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++D
Sbjct: 996 SARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYD 1055
Query: 889 GVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
GVA+A A L ++ H + F THY +A +F G H + P +
Sbjct: 1056 GVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEG------------HPEIAPKRMR 1100
Query: 949 -----SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++ VT+LYK+ GV+E SFG A + +P I RA V A + E +SR++
Sbjct: 1101 IHVDDEERRVTFLYKLEDGVAEGSFGMHCAAMCGIPDKVIERAEVAAKQWEH--TSRLKE 1158
Query: 1004 RSAKR 1008
+R
Sbjct: 1159 SLERR 1163
>gi|299742330|ref|XP_001832397.2| DNA mismatch repair protein msh6 [Coprinopsis cinerea okayama7#130]
gi|298405134|gb|EAU89431.2| DNA mismatch repair protein msh6 [Coprinopsis cinerea okayama7#130]
Length = 1269
Score = 313 bits (801), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 279/974 (28%), Positives = 432/974 (44%), Gaps = 124/974 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P +P P T+ IP + ++TP E+Q E+K + D +L + G F +
Sbjct: 329 RRPGEPDYDPRTIY-IPKKAWA-----EFTPFEKQFWEIKQNHYDTVLFFQKGKFFELYE 382
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA------A 174
+DA + + + +P N + + G+KVG V+Q ETA
Sbjct: 383 DDARIGHQEFDLKLTSRVKMSMVGVPESSFNFWAAKFLGKGYKVGRVEQAETALGAEMRM 442
Query: 175 IKAHGPGKAGP-------FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDG 227
A G GK R L+ +YT TL +D + N C+
Sbjct: 443 AAAKGKGKVSEDKAKDKIVRRELNKVYTNGTL--------VDDALLTDENAGHCIA---- 490
Query: 228 NVGKIRNGVFGDGFDV--RLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL 285
I DG D + G+ ++ ST F D R+ LE +L + P ELL
Sbjct: 491 ----ICEQPCEDGSDSANKFGICVLDCSTSQFNLTGFVDDICRTKLETLLRQICPKELLF 546
Query: 286 GQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQ 344
+ S T+++L A P+ + + F AL + L+ + ED + +E +
Sbjct: 547 YKGSFSVDTQRVLKAVL-PSDCLWTGLREVEGFKYDDALKALKDLFPS-EEDAMEEDEGE 604
Query: 345 NMDVPEQGNHRSAIEGIMNMP--DLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME 402
+P S E I M A++AL I +L+Q +++ + +F ++ ME
Sbjct: 605 AQLLPP-----SVPESIRKMATDKCAIEALGSMIWYLRQLNIDKDIVTMRNF-NIYDPME 658
Query: 403 ----MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLI 458
+ L TL LE+L NN GSE G+L H++ +T +G RL R W+ PL + + I
Sbjct: 659 RNQGLVLDGQTLAHLEILLNN-EGSEDGSLFHLLRRCITPFGKRLFRIWLCMPLREVSAI 717
Query: 459 SARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRG 518
+ARLDAV +I + P F S + + PD++R
Sbjct: 718 NARLDAVEDI------------------------MKHPTFESSFSELAKGI---PDLERI 750
Query: 519 ITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASS 578
++RI + +F+ V+ + L +L + E+ SKT+ L L +
Sbjct: 751 VSRIHAKNCKVKDFLKVLSTFKSLSRGLAKL---ADESEEFESKTI-------LGLLRGA 800
Query: 579 PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCR 638
P ++ L S K + D L + + ++ + R ++S + +LD +
Sbjct: 801 PDLLVNVRHLESMFEKPSDKDRDELKPVEGKDEEYDGIVRE---IRSLERDLDKSLKAFE 857
Query: 639 KQLGMRNLEFMSVSGIT--HLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
K+ G+ + S G +L+E A VP +WAK RY P + + +L
Sbjct: 858 KETGLDLDYWHSAIGTKDIYLVETSAKNADDVPDDWAKN-------RYSVPSLQPTIRKL 910
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPV 752
A E L + EF +++ A++ A LDCL +LA S RP
Sbjct: 911 KEARENLNTAVKNFKFRLYAEFDKDRSQWLRAIRVFAELDCLFSLAKASAAIGSPSCRPE 970
Query: 753 FVDDHEPVQIHICSGRHPVLDTILL----DNFVPNDTNLHAEREYCQIITGPNMGGKSCY 808
F++ + I RHP TI L ++FV ND + E ++TGPNM GKS
Sbjct: 971 FIE-GDSAFIEFEDLRHP---TICLNRHIESFVENDVKMGGEDPKIILLTGPNMAGKSTL 1026
Query: 809 IRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRN 868
+R ++ IMAQ+G VPAS A L +D I TRMGA D++ STF EL+E ILRN
Sbjct: 1027 MRMTSIGVIMAQLGMLVPASRARLCPVDSIITRMGAYDNMFTNSSTFKIELDECCKILRN 1086
Query: 869 CTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSV 928
T +SLVI+DELGRGTST DG+AIA + L L H + F THY + D
Sbjct: 1087 ATPKSLVILDELGRGTSTFDGMAIAGSVLHKLATHTLPLAFFATHYGSLTDDY------- 1139
Query: 929 GTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATV 988
YH + H M M + Q +T+LYK+V G + SSFG VA+LA +P + + RA
Sbjct: 1140 -AYHPNIRRMH--MSTMVDEERQQLTFLYKLVDGAATSSFGSHVARLAGVPDTVVERADD 1196
Query: 989 IAAKLEAEVSSRVQ 1002
++A+ + R+Q
Sbjct: 1197 VSAEFAKQFKERLQ 1210
>gi|154275572|ref|XP_001538637.1| hypothetical protein HCAG_06242 [Ajellomyces capsulatus NAm1]
gi|150415077|gb|EDN10439.1| hypothetical protein HCAG_06242 [Ajellomyces capsulatus NAm1]
Length = 1188
Score = 312 bits (800), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 272/976 (27%), Positives = 440/976 (45%), Gaps = 135/976 (13%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P T+ IP P + T K++P E+Q E+K K+ D ++ + G + + D
Sbjct: 314 PGHPDYDPRTIY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEND 367
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGK 182
A + ++ + N +P L+ + V GFK+ V Q+E+A K +
Sbjct: 368 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREKQ 427
Query: 183 AGPFG----------RGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVG 230
G R LS + T TL V G +D S Y CV
Sbjct: 428 DKSNGTPVKQDKIIRRELSCVLTSGTL-----VDGSMLQDDM---STY--CVA------- 470
Query: 231 KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-L 289
I+ + D G+ V+ +TG EF D + E + P ELLL + +
Sbjct: 471 -IKEALVNDL--PAFGIAFVDTATGQFYLAEFIDDADMTKFETFVAQTRPQELLLEKSVM 527
Query: 290 SKQTEKMLLAYAGPAS--NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD 347
S + ++L GP + N C A+V T+ + N
Sbjct: 528 STKALRILKNNTGPTTLWNYLKPCKE-------FCEADV----------TVRELDASNYF 570
Query: 348 VPEQGNHRSAI-EGIMNMPD--LAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSM 401
V E+G++ +A E + D + A +++L+ +ER ++ +G + + +
Sbjct: 571 VSEEGDNIAAWPEALRQARDKEFVMSAFGALVQYLRMLKIERDLITIGNFTWYDPIKKAT 630
Query: 402 EMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISAR 461
+ L TL LE+ N+ +G + GTL H++N +T +G RL ++WV HPL D I+AR
Sbjct: 631 SLVLDGQTLINLEIFANSFDGGQEGTLFHLLNRCITPFGKRLFKQWVCHPLMDTRKINAR 690
Query: 462 LDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITR 521
LDAV D N+D + V+ QF SS LT + PD++R I+R
Sbjct: 691 LDAV-------------------DALNADSS-VQNQF----SSQLTKM---PDLERLISR 723
Query: 522 IFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAV 581
+ +F+ V++ + L G + L AS P +
Sbjct: 724 VHAGRCKAQDFLHVLEGFEKIDYTMGLLKEIGSGEGAIGQ------------LVASMPDL 771
Query: 582 IGKAAKLLSTVNK-EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQ 640
G + ++ +A D G +++ G + + + + +LD L+ RK+
Sbjct: 772 SGYLQYWKTAFDRTKAKDSG----ILVPEAGVEEDFDASHDRISEIESDLDQLLKEVRKK 827
Query: 641 LGMRNLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANE 699
LG + + + +E+P K VP +W ++++TK+ R++ PE+ + + QL A E
Sbjct: 828 LGSNAIVYRDNGKEIYQLEVPIKIKNVPKDWDQMSATKQAKRFYFPELRSLIRQLQEAQE 887
Query: 700 ELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDH 757
+ + + F F Y+ + AAV+ +A LDCL +LA S + RPVFVDD
Sbjct: 888 THSQIVKEVASRFYARFDENYSTWLAAVRTIAQLDCLISLAKASSALGYPSCRPVFVDDE 947
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
V + RHP + + D F+PND L ++TG N GKS +R I
Sbjct: 948 RSV-LEFEELRHPCMLPNVGD-FIPNDVKLGGNTPNLNLLTGANAAGKSTILRMTCTAVI 1005
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MAQ+G +VP SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+
Sbjct: 1006 MAQIGCYVPCQSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILFEATPRSLVIL 1065
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
DELGRGTS++DGVA+A A L ++ H + F THY +A ++F G
Sbjct: 1066 DELGRGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---SEFEG----------- 1111
Query: 938 SHKVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAK 992
H + P + ++ VT+LYK+ G++E SFG A + +P + RA + A +
Sbjct: 1112 -HPEIAPRRMRIHVDEEERRVTFLYKLEEGIAEGSFGMHCASMCGIPNKVVERAEIAAKQ 1170
Query: 993 LEAEVSSRVQNRSAKR 1008
E +SR++ +R
Sbjct: 1171 WEH--TSRLKESVKRR 1184
>gi|116203755|ref|XP_001227688.1| hypothetical protein CHGG_09761 [Chaetomium globosum CBS 148.51]
gi|88175889|gb|EAQ83357.1| hypothetical protein CHGG_09761 [Chaetomium globosum CBS 148.51]
Length = 1221
Score = 312 bits (799), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 268/982 (27%), Positives = 439/982 (44%), Gaps = 140/982 (14%)
Query: 59 PPKTPKKPKLSP--HTL-----------------NPIPTPSSQTTH-------NKKYTPL 92
PP+ P PK P HT NP P T + ++P
Sbjct: 283 PPRKPTDPKTKPKAHTKEPEDRYPWLANILDGNKNPPGHPEFDPTSIYIPPLAERGFSPF 342
Query: 93 EQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNV 152
E+Q ++K K D ++ + G + + DA + ++ + N +P L++
Sbjct: 343 EKQYWDIKKKLWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDM 402
Query: 153 HVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGC 212
V + V G+KV V Q E+A G+ + + A + A+ + E C
Sbjct: 403 WVNQFVAKGYKVARVDQMESA------------LGKEMRERDSNA--KKADKIIRRELAC 448
Query: 213 GGESNYLV--CVVDDD--GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
LV ++ DD I+ V D G+ V+ +TG EF D
Sbjct: 449 ILTGGTLVDGSMLQDDMATYCAAIKESVVND--KPAFGIAFVDAATGQFFLSEFEDDVDL 506
Query: 269 SGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPAS---NVRVEC-------ASRDCF 317
+ E + SP EL+L + LS + ++L GP + N++ E A R+
Sbjct: 507 TKFETFVAQTSPRELVLEKSRLSTKALRILKNNTGPTTIWNNLKPETEFWGADLARRELE 566
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
GG ++E + E + TL+ ++D+ DLA+ A+
Sbjct: 567 CGGYFVSEGGA--EEVWPKTLAESKDK---------------------DLAISAMGGLTH 603
Query: 378 HLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
+L+ L+R ++ G A + + + + L +L LE+ N +N GTL +++N
Sbjct: 604 YLRVLMLDRNLLSQGNFAWYNPIHRNGTLILDGQSLINLEIFTNTANNGPEGTLFNLLNR 663
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
+T +G RL R+WV HPLC+ I+ RLDAV D N+D +I+
Sbjct: 664 CITPFGKRLFRQWVCHPLCNTQKINERLDAV-------------------DMLNADRSIL 704
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+ QF + + + PD++R I+RI P +F+ V++ + L G
Sbjct: 705 Q-QFS-------SQMAKMPDLERLISRIHAGACRPQDFVRVLEGFEQIDYTMGLLGAFGG 756
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+ L+ RLI AS P + + ++ A G L I G
Sbjct: 757 ----------GNGLVDRLI--ASMPDLKEPLGYWETAFDRTMARDGKL----IPEKGIEE 800
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVN 674
+ ++ ++ K EL +L+ + L + ++F V + IE+P KVP NW +++
Sbjct: 801 DFDNSQNELERIKGELHALLEKQKTALKCKTIKFTDVGKEVYQIEVPKAVKVPTNWRQMS 860
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+T RY+ + + +L E + + + F K F Y + A++ +A LD
Sbjct: 861 ATSAVKRYYFRALEDLVRELQETEETHSQILKEVASRFSKRFDMDYEVWLQAIRIIAQLD 920
Query: 735 CLHALATLSRNKNF--VRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAERE 792
CL +LA S RPVF+D+ V + RHP + T +D+F+PND L +
Sbjct: 921 CLTSLAKSSSALGVPSCRPVFIDEDRSV-VEFKELRHPCM-TNSVDDFIPNDIKLGGDEA 978
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
++TG N GKS +R + IMAQ+G +VPA SA L +D I +R+GA+D+I +
Sbjct: 979 KINLLTGANAAGKSTILRMSCIAVIMAQIGCYVPALSATLTPIDRIMSRLGANDNIFAAQ 1038
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF EL+E IL T +SLVI+DELGRGTS++DGVA+A A L ++ H C+ F T
Sbjct: 1039 STFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVASHIGCVGFFAT 1098
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY +A +F + + ++ +D ++ + VT+LY++ GV+E SFG
Sbjct: 1099 HYHSLA---AEFA------QHPEVRARRMQIDVD-EARKRVTFLYRLEDGVAEGSFGMHC 1148
Query: 973 AQLAQLPPSCISRATVIAAKLE 994
A + +P I RA V A + E
Sbjct: 1149 AAMCGIPGRVIDRAEVAAREWE 1170
>gi|315051840|ref|XP_003175294.1| DNA mismatch repair protein msh6 [Arthroderma gypseum CBS 118893]
gi|311340609|gb|EFQ99811.1| DNA mismatch repair protein msh6 [Arthroderma gypseum CBS 118893]
Length = 1211
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 264/964 (27%), Positives = 444/964 (46%), Gaps = 116/964 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL IP P + T K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 299 PDYDPRTLY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYENDATI 352
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH------- 178
++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 353 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKG 412
Query: 179 GPGKAGP----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRN 234
GKA R L+ + T TL + G S Y V I+
Sbjct: 413 NKGKAQKEDKVIKRELACVLTTGTLVEGSMIQGDM------STYCVA----------IKE 456
Query: 235 GVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQT 293
+ DG G+ V+ +TG +F D + E + P ELLL + +S +
Sbjct: 457 SII-DGLPA-FGISFVDTATGQFFLSQFVDDVDMTRFETFVAQTRPQELLLEKSVMSTKA 514
Query: 294 EKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 353
++L GP + ++ + + E+ + G+ +S +G+
Sbjct: 515 LRILKNNTGPTTLWNYLKPGKEFWEADVTVREL-----DAGDYFVSG----------EGS 559
Query: 354 HRSAIEGIMNM---PDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSA 407
+ S ++ DL + AL +++L+ + R ++ +G + + + + L
Sbjct: 560 YVSGWPQVLQDARDKDLVMSALGALLQYLEMLKIGRDLITIGNFTWYDPIKKASSLVLDG 619
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
TL LE+ N +GS GTL ++N +T +G RL ++WV HPL D I+ARLDAV
Sbjct: 620 QTLINLEIFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLMDTTKINARLDAVES 679
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
+ N+D T+ E QF SS LT + PD++R I+R+ T
Sbjct: 680 L-------------------NADSTVRE-QF----SSQLTKM---PDLERLISRVHAGTC 712
Query: 528 TPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK 587
+F+ V++ +Q++ + G +E + L L+ ++ P + G
Sbjct: 713 KAQDFVRVLEGF----EQIE--YTMGLLKEAGSGYGLIGQLI------SAMPNLNGLLKF 760
Query: 588 LLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
+ ++ A + D+L + G E +RK ++ +++L+ +++ RK+L +
Sbjct: 761 WETAFDRPKARESDIL---VPEEGIEEEFDASRKGIEQLEDDLEQVLHRTRKELKCSTIV 817
Query: 648 FMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCR 706
F + +E+P K +P +W ++++TK+ RY+ PE+ + +L A E + +
Sbjct: 818 FKDNGKEIYQLEVPIKIKNIPKSWDQMSATKQVKRYYFPELRALIRKLQEARETHAQIVK 877
Query: 707 AAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHI 764
F F Y+ + AAV+ +A LDCL LA S RP+FVDD V +
Sbjct: 878 GVAGRFYARFDKDYSSWLAAVKIIAQLDCLIGLAKASTALGHPSCRPIFVDDERSV-LDF 936
Query: 765 CSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
RHP + + D F+PND L + ++TG N GKS +R IMAQ+G +
Sbjct: 937 QELRHPCMMPNIGD-FIPNDVKLGGDSSNINLLTGANAAGKSTVLRMTCTAVIMAQIGCY 995
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VP A L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGT
Sbjct: 996 VPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGT 1055
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
S++DGVA+A A L ++ H + F THY +A +F G + + ++
Sbjct: 1056 SSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEGH------PEIAARRMRIH 1106
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNR 1004
+D +++ VT+LYK+ GV+E SFG A + +P + A + A + E +SR++
Sbjct: 1107 VDD-AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEIAAKQWEH--TSRMKES 1163
Query: 1005 SAKR 1008
KR
Sbjct: 1164 LEKR 1167
>gi|332982487|ref|YP_004463928.1| DNA mismatch repair protein MutS [Mahella australiensis 50-1 BON]
gi|332700165|gb|AEE97106.1| DNA mismatch repair protein MutS [Mahella australiensis 50-1 BON]
Length = 882
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 268/923 (29%), Positives = 434/923 (47%), Gaps = 139/923 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ QQ ++LK +Y D LL +G + F +DA +A+K L G ++
Sbjct: 5 TPMMQQYLQLKERYKDCLLFFRLGDFYEMFFDDAVLASKELELTLTGRDCGMEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ ++ RLV G+KV + +Q E A+ G R + + T T
Sbjct: 65 VPYHAVDTYIARLVEKGYKVAICEQMEDPALAK------GLVERDVIRIITPGT------ 112
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ G E+NYL+C V GD G+ V+ISTG +
Sbjct: 113 ITDGSMLDEKENNYLLCA------------HVNGDN----CGIAFVDISTGRCSITQLQ- 155
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV--RVECASRDCFIGGGA 322
+GL L + PAE++ +P Q AG V R++ C +
Sbjct: 156 ---TAGLADELARIQPAEMMANEPFFDQ--------AGMLKTVQQRLDIKPGHCSVEFDD 204
Query: 323 LAEVMSLYE-NMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ + ++ E NM D L + M P+ AV ALA I +L +
Sbjct: 205 VDKAYAMLEANMSADVLDYVSKEEM--PQ-----------------AVCALASLISYLIE 245
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ +G M L A T + LE+ +GS GTL+ +++HT T G
Sbjct: 246 TQKTALANIGG-IEVYHIQQYMILDAATRRNLELCETMRSGSHKGTLMWVLDHTSTAMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R+L+ W+ PL + N ++ R +AV +A ++ + + D K +
Sbjct: 305 RMLKSWIEQPLLNINALNERQEAVEAMA--------NQPLWKDDIKEA------------ 344
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK--QLQQLHIDGEYREKV 559
LS + DI+R +++ + + IA+ Q++ G+ +L +L + G+
Sbjct: 345 LSGIY-------DIERLMSKAVYGNINARDLIALKQSL---GRLPRLNELALQGK----- 389
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL--LNLMIISNGQFSEVA 617
+A LK L I + + ++K AD L + II +G V
Sbjct: 390 ------AARLKTL------GQRIDVMDDIYTLIDKAIADDPPLSVKDGNIIKDGYDQSVD 437
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNS 675
R + ++ + L R + G+++L+ + IE+ ++ VP ++ + +
Sbjct: 438 ELRDISHNGRQWISRLEQQERDRTGIKSLKVGYNKVFGYYIEVTKSYYDMVPADYIRKQT 497
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY +PE+ +++ A+E L + + G+ Q A+A LDC
Sbjct: 498 LANAERYITPELKEMENKILSASERLVALEYQIFADIRDTVVGHIKRVQQTASAIAELDC 557
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREYC 794
L +LA + ++VRPV +E +I I +GRHPV++ +L FVPNDT L +
Sbjct: 558 LCSLADAAIENHYVRPVL---NEGQRIVIQNGRHPVVEKVLPPHTFVPNDTLLDNGEDMV 614
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS Y+RQVALI +MAQ+GSFVPA AE+ ++D I+TR+GASD + G+ST
Sbjct: 615 CIITGPNMAGKSTYMRQVALIVLMAQIGSFVPADMAEIGIVDRIFTRVGASDDLSTGQST 674
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVT 912
F+ E+ E ++IL N TA+SL+I+DE+GRGTST DG++IA+A ++Y+ + + LF T
Sbjct: 675 FMVEMTEVAHILHNATAKSLLILDEIGRGTSTFDGLSIAWAVIEYVADPGRLGAKTLFAT 734
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ +++ + TG V Y++S + DV +L K++ G S SFG +V
Sbjct: 735 HYHELTELEGRLTG-VKNYYISV-----------REHGDDVIFLRKIMRGGSGRSFGIQV 782
Query: 973 AQLAQLPPSCISRATVIAAKLEA 995
A+LA LP I RA I L A
Sbjct: 783 ARLAGLPQDVIDRAREILDILNA 805
>gi|119500868|ref|XP_001267191.1| DNA mismatch repair protein Msh6, putative [Neosartorya fischeri NRRL
181]
gi|119415356|gb|EAW25294.1| DNA mismatch repair protein Msh6, putative [Neosartorya fischeri NRRL
181]
Length = 1214
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 258/949 (27%), Positives = 435/949 (45%), Gaps = 108/949 (11%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P T+ P + K++P E+Q E+K K+ D ++ + G + + D
Sbjct: 299 PDHPDYDPRTIYIPPLAWA------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 352
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA---AIKAHG 179
A + ++ + N +P L+ + V GFK+ V Q+E+A ++
Sbjct: 353 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRERD 412
Query: 180 PGKAGP-----FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKI 232
K+G R LS + T TL V G +D S Y CV I
Sbjct: 413 GKKSGGKEDKIIKRELSCVLTAGTL-----VEGSMLQDDM---STY--CVA--------I 454
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSK 291
+ + D G+ V+ +TG EF D + E + P ELLL + +S+
Sbjct: 455 KEAIIDDR--PAFGLAFVDTATGQFSLSEFVDDVDMTKFETFVAQTRPQELLLEKSTISQ 512
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQ 351
+ ++L GP + ++ + + E+ + E +S ++D PE
Sbjct: 513 KALRILKNNTGPTTIWNHLKPGKEFWEADITVKEL-----DASEYFVSQDDDNLQAWPEP 567
Query: 352 GNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSAN 408
E +M+ A +++L+ L+R ++ +G + + + + + L
Sbjct: 568 LREARDKELVMS-------AFGALVQYLRVLKLDRDLITIGNFSWYDPIRKASSLVLDGQ 620
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL +E+ N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 621 TLINMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDAV--- 677
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
D N+D ++ + QF SS LT + PD++R I+RI
Sbjct: 678 ----------------DALNADSSVRD-QF----SSQLTKM---PDLERLISRIHAANCK 713
Query: 529 PSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL 588
+F+ V++ + L G E V + L + P +
Sbjct: 714 AQDFVRVLEGFEQIEYTITLLKDSGSSGEGVIGQ-----------LISGMPDLSSLLEYW 762
Query: 589 LSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEF 648
+ ++ A + +L + G + +++ ++ +LD+L+ R++LG + +
Sbjct: 763 KTAFDRTKAKENGIL---VPKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICY 819
Query: 649 MSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRA 707
+ +E+P K +P NW ++++TK+ RY+ PE+ + + +L A E + + +
Sbjct: 820 RDNGKEIYQLEVPIKVKNIPKNWDQMSATKQVKRYYFPELRSLIRKLQEAQETHSQIVKE 879
Query: 708 AWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHIC 765
F F Y + AAV+ ++ LDCL +LA S + RPVFV+D V +
Sbjct: 880 VAGRFYARFDENYTTWLAAVRIISQLDCLISLAKASSSLGHPSCRPVFVEDERSV-LEFE 938
Query: 766 SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
RHP L + + D F+PND L E ++TG N GKS +R + IMAQ+G ++
Sbjct: 939 ELRHPCLLSSVED-FIPNDVRLGGEVPNINLLTGANAAGKSTVLRMTCIAVIMAQIGCYL 997
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
P SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS
Sbjct: 998 PCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTS 1057
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPM 945
++DGVA+A A L ++ H M F THY +A +F G +T ++ +
Sbjct: 1058 SYDGVAVAQAVLHHVATHIGAMGFFATHYHSLA---AEFDGH------PEITPKRMKIHV 1108
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
D + ++ +T+LYK+ GV+E SFG A + +P I RA V A + E
Sbjct: 1109 DDE-ERRITFLYKLEDGVAEGSFGMHCASMCGIPNKVIERAEVAAKQWE 1156
>gi|367048143|ref|XP_003654451.1| hypothetical protein THITE_2117497 [Thielavia terrestris NRRL 8126]
gi|347001714|gb|AEO68115.1| hypothetical protein THITE_2117497 [Thielavia terrestris NRRL 8126]
Length = 1231
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 263/944 (27%), Positives = 425/944 (45%), Gaps = 103/944 (10%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P ++ IP PS++ + ++ E+Q ++K D ++ + G + + D
Sbjct: 323 PGHPDFDPTSIY-IP-PSAE----RGFSAFEKQYWDIKKNLWDTIVFFKKGKFYELYEND 376
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGK 182
A + ++ + N +P L++ V + V GFKV V Q E+A
Sbjct: 377 ATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQMESAL-------- 428
Query: 183 AGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDD--GNVGKIRNGVFG 238
G ++ + AE + E C LV ++ DD I+ V
Sbjct: 429 ------GKEMRERESNDKKAEKIIRRELTCILTGGTLVDGAMLQDDMATYCAAIKESVVD 482
Query: 239 DGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKML 297
+ G+ V+ +TG EF D + E + SP EL+L + LS + ++L
Sbjct: 483 E--KPAFGIAFVDAATGQFFLSEFEDDVDLTKFETFVAQTSPRELVLEKSRLSSKALRIL 540
Query: 298 LAYAGPASNVRVECASRDCFIGGGALAEV-MSLYENMGEDTLSNNEDQNMDVPEQ-GNHR 355
GP + + + A E+ S Y ++ E Q + P++ G R
Sbjct: 541 KNNTGPTTIWNYLKPGTEFWDADLARRELDCSGY-------FTSEEGQEVVWPKKLGEAR 593
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRS---LSGSMEMTLSANTLQQ 412
DLA+ AL +L+ L++ + +F S + + + L +L
Sbjct: 594 EK--------DLAMSALGGLTHYLRILKLDQSLLSQGNFESYNPIHRNGTLILDGQSLIN 645
Query: 413 LEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESM 472
LEV N NG GTL ++N +T +G RL R+WV HPLC+ I+ RLDAV
Sbjct: 646 LEVFANTVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLCNIQKINERLDAV------- 698
Query: 473 GSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF 532
D+ I + IL + + + PD++R I+RI P +F
Sbjct: 699 -----------------DMLIAD---RSILQQFSSQMAKMPDLERLISRIHAGACRPEDF 738
Query: 533 IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTV 592
+ V++ + L G + L+ RLI AS P + +
Sbjct: 739 VRVLEGFEQIDYTMALLGAFGG----------GNGLVDRLI--ASMPNLKEPLGYWETAF 786
Query: 593 NKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
++ A LL I G + R++ + K+EL +L+ + L + L+F V
Sbjct: 787 DRRKARDSKLL---IPERGVEEDFDRSQDELARIKDELHALLERQKTALKCKTLKFTDVG 843
Query: 653 GITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+ IE+P + KVP +W ++++T RY+ E+ + +L A E + + + F
Sbjct: 844 KEIYQIEVPKSVKVPASWRQMSATSAVKRYYFRELEDLVRELQEAEETHSQIVKEVASRF 903
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSGRHP 770
+ F Y + A++ +A LDCL +LA S RPVFVDD V + RHP
Sbjct: 904 FRRFDMDYEVWLQAIRIIAQLDCLISLAKSSSALGMPSCRPVFVDDERSV-VEFKELRHP 962
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+ + D F+PND L + ++TG N GKS +R + IMAQ+G VPA+SA
Sbjct: 963 CMANTVAD-FIPNDIKLGGDEAKINLLTGANAAGKSTILRMSCIAVIMAQIGCHVPAASA 1021
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGV
Sbjct: 1022 RLTPIDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDELGRGTSSYDGV 1081
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
A+A A L ++ H C+ F THY +A +F H + + ++ +D + +
Sbjct: 1082 AVAQAVLHHVASHIGCVGFFATHYHSLA---AEFA------HHPEVRARRMQIRVDER-E 1131
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ VT+LY++ GV+E SFG A + +P I RA V A + E
Sbjct: 1132 RRVTFLYRLEDGVAEGSFGMHCAAMCGIPRRVIDRAEVAAREWE 1175
>gi|389641339|ref|XP_003718302.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae 70-15]
gi|351640855|gb|EHA48718.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae 70-15]
gi|440466802|gb|ELQ36046.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae Y34]
gi|440480286|gb|ELQ60960.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae P131]
Length = 1218
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 264/942 (28%), Positives = 415/942 (44%), Gaps = 139/942 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K++P E+Q E+K K D ++ + G + + DA + ++ + N +P
Sbjct: 326 KFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPE 385
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETA---AIKAHGPGKAGP-----FGRGLSALYTKATL 199
L++ V + V G+KV V Q E+A ++ G K R L+ + T TL
Sbjct: 386 ASLDIWVNQFVAKGYKVARVDQMESALGKEMRERGGDKKNKKEDKIIRRELACILTGGTL 445
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
E + CV + + + FG F V+ +TG
Sbjct: 446 --------VEGSMLQDDMATFCVAIKESTINN--HPAFGIAF--------VDAATGQFFI 487
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPAS------------- 305
+F D + E + SP ELLL + +S + ++L P +
Sbjct: 488 SQFEDDVDLTKFETFVAQTSPRELLLEKSNISTKALRILKNNTSPTTIWNYLKPDSEFLD 547
Query: 306 --NVRVECASRDCF--IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI 361
R E + D F GG EV + L + D+
Sbjct: 548 PETTRRELSCGDYFKVADGGDETEVWP-------EALDKSRDK----------------- 583
Query: 362 MNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRN 418
DL + A+ + +L+ LER + +F + + L +L LEV N
Sbjct: 584 ----DLLMSAMGALVHYLRVLKLERSLLSQGNFEWYNPIHRDGTLVLDGQSLINLEVFSN 639
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
+ NG GTL +++N +T +G RL R+WV HPLC+ I+ RLDAV
Sbjct: 640 SVNGGPEGTLFNLLNRCITPFGKRLFRQWVCHPLCNIKKINERLDAV------------- 686
Query: 479 ESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA 538
D N+D +I+E QF ++S + PD++R I+RI +F+ V++
Sbjct: 687 ------DMLNADRSILE-QFSSLMSKM-------PDLERLISRIHAGVCKAEDFVRVLEG 732
Query: 539 ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKE 595
+ L G + L+ RLI L P K+A V E
Sbjct: 733 FEQIEYAMSMLSAFGG----------GNGLVDRLISSMLDLKEPLTFWKSAFDRKKVRDE 782
Query: 596 AADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT 655
L+I G + + + K++L SL++ + L ++L+F V
Sbjct: 783 --------KLLIPERGIEEDFDESADNIVRIKKDLQSLLDKQKAALKCKSLKFTDVGKEI 834
Query: 656 HLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
+ IE P + KVP +W ++++T RY+ E+ + +L A E + + + F K
Sbjct: 835 YQIEAPKSTKVPKDWRQMSATSAVKRYYFRELDELVRELQEAEETHSQIVKDVAARFFKR 894
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGRHP-VL 772
F YA + A++ ++ LDCL LA S + + RP FVD HE + RHP +L
Sbjct: 895 FDVDYAIWIQAIRIISQLDCLICLAKASSSLGEPSCRPTFVD-HERSVVEFEELRHPCML 953
Query: 773 DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
+T+ D+F+PND L + ++TG N GKS +R + IMAQ+G +VPA SA L
Sbjct: 954 NTV--DDFIPNDIKLGGDDANINLLTGANAAGKSTVLRMSCIAVIMAQIGCYVPAVSARL 1011
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
+D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGVA+
Sbjct: 1012 TPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAV 1071
Query: 893 AYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD 952
A A L ++ H C+ F THY +A T+F H + D+K +
Sbjct: 1072 AQAVLHHVASHIGCVGFFATHYHSLA---TEFEN-----HPEIRAKRMQIQVDDAK--RR 1121
Query: 953 VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
VT+LY++ GV+E SFG A + + I RA V A + E
Sbjct: 1122 VTFLYRLEDGVAEGSFGMHCAAMCGISDRVIERAEVAAKEWE 1163
>gi|169773547|ref|XP_001821242.1| DNA mismatch repair protein Msh6 [Aspergillus oryzae RIB40]
gi|238491536|ref|XP_002377005.1| DNA mismatch repair protein Msh6, putative [Aspergillus flavus
NRRL3357]
gi|83769103|dbj|BAE59240.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697418|gb|EED53759.1| DNA mismatch repair protein Msh6, putative [Aspergillus flavus
NRRL3357]
gi|391869161|gb|EIT78363.1| mismatch repair ATPase MSH6 [Aspergillus oryzae 3.042]
Length = 1201
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 274/968 (28%), Positives = 446/968 (46%), Gaps = 120/968 (12%)
Query: 62 TPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGE 121
+P P P TL P + K++P E+Q E+K K+ D ++ + G + +
Sbjct: 289 SPGHPDYDPRTLYIPPLAWA------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEN 342
Query: 122 DAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA--HG 179
DA + ++ + N +P L+ + V GFK+ V Q E+A K
Sbjct: 343 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRER 402
Query: 180 PGKAGP-----FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKI 232
GK G R LS++ T TL V G +D S Y CV I
Sbjct: 403 DGKKGGKEDKVIRRELSSVLTAGTL-----VEGSMLQDDM---STY--CVA--------I 444
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSK 291
+ + D F G+ V+ +TG EF D + E + P ELLL + +S+
Sbjct: 445 KEAIIED-FPA-FGLAFVDTATGQFFLSEFVDDADMTKFETFVAQTRPQELLLEKSTVSQ 502
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQ 351
+ ++L GP + ++ + + E+ ++ E +S ++D PE
Sbjct: 503 KALRILKNNTGPTTIWNHLKPGKEFWEADITVKEM-----DVSEYFVSEDDDNLKAWPEA 557
Query: 352 GNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQ 411
E +M+ VQ L L + +S+ + + + L TL
Sbjct: 558 LRAARDKELVMSAFGALVQYLRLLKLDRDLITIGNF----SSYDPIKKASSLVLDGQTLI 613
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
+E+ N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 614 NMEIFANSFDGGSDGTLFQLLNRCITPFGKRMFKQWVCHPLIDAKKINARLDAV------ 667
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
D N+D I + QF SS LT + PD++R I+RI +
Sbjct: 668 -------------DALNADPNIRD-QF----SSQLTKM---PDLERLISRIHAANCKAQD 706
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
F+ V++ +Q+ EY +LLK + S VIG+ +
Sbjct: 707 FLRVLEG-------FEQI----EYT---------VSLLKD---SGSGEGVIGQLISAMPD 743
Query: 592 VN------KEAADQGDLLN--LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+N K A D+ +++ +G + +++ ++ ELDSL+ R++LG
Sbjct: 744 LNELLEYWKTAFDRTKARENGILVPKSGVEEDFDNSQEYIEELHNELDSLLKRVRRELGS 803
Query: 644 RNLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
+ + + +E+P K +P NW ++++TK+ RY+ PE+ T + +L A E +
Sbjct: 804 TAICYRDNGKEIYQLEVPIKVKNIPKNWDQMSATKQVKRYYFPELRTIIRKLQEAQETHS 863
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPV 760
+ + F F +Y + AAV+ ++ LDCL +LA S + + RPVFV+D V
Sbjct: 864 QIVKEVAGRFYARFDEHYITWLAAVKIISQLDCLISLAKASSSLGQPSCRPVFVEDERSV 923
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
+ RHP L + + D F+PND L +R ++TG N GKS +R + IMAQ
Sbjct: 924 -LEFEELRHPCLLSSVED-FIPNDIKLGGDRANIDLLTGANAAGKSTVLRMTCVAVIMAQ 981
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G ++P SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DEL
Sbjct: 982 IGCYLPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1041
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTS++DGVA+A A L ++ H + F THY +A +F G +T +
Sbjct: 1042 GRGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEGH------PEITPKR 1092
Query: 941 VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ +D + ++ VT+LYK+ GV+E SFG A + + I RA V A + E +SR
Sbjct: 1093 MKIHVDDE-ERRVTFLYKLEDGVAEGSFGMHCAAMCGISSKVIERAEVAAKQWEH--TSR 1149
Query: 1001 VQNRSAKR 1008
++ +R
Sbjct: 1150 LKESLERR 1157
>gi|170100210|ref|XP_001881323.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644002|gb|EDR08253.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1291
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 274/974 (28%), Positives = 435/974 (44%), Gaps = 119/974 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P +P P T I P S K +TP E Q E+K + D +L + G F +
Sbjct: 353 RRPGEPNYDPRT---IFIPKSAW---KDFTPFETQFWEIKQNHYDTILFFQKGKFFELYE 406
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA----AIK 176
+DA + +V + +P N + + G+KVG V+Q ETA
Sbjct: 407 DDARVGHQVFDLKLTSRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVEQAETALGAEMRM 466
Query: 177 AHGPGKAGP-------FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNV 229
A GKA R L+ +YT TL E + + G + + + ++
Sbjct: 467 AATKGKASEDKSKDKIVRRELNKVYTNGTLVDPELLTDEQAG------HCISICEEGSEP 520
Query: 230 GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-P 288
+ + G+ +E ST F D R+ LE +L + P EL+ +
Sbjct: 521 S-----------NNKFGICVLECSTSQFNLSSFEDDVCRTKLETLLRQIRPKELVYKKGT 569
Query: 289 LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNM-- 346
LS T+++L + PA + S + F L E+ +L+ +D + + ++ +
Sbjct: 570 LSVATQRLLKSILPPAC-LWTGLRSVEGFNYEATLQEIKALFPPEEDDNMDDTDESLLPS 628
Query: 347 DVP----EQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSG 399
VP E G +SAIE + +M I +L+Q +++ + +F +
Sbjct: 629 SVPDCIREMGGDQSAIEALGSM-----------IWYLRQLNIDKDILSMKNFNVYDPMKR 677
Query: 400 SMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLIS 459
+TL TL +E+L NN G+E G+LL ++ +T +G RL R W+ PL D + I+
Sbjct: 678 GRGLTLDGQTLAHIEILLNN-EGTEDGSLLTLLRRCITPFGKRLFRIWLCMPLSDISAIN 736
Query: 460 ARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGI 519
AR + + + +H P F + V L PD++R +
Sbjct: 737 AR--------------KVVQDILKH-----------PTFEASFTGVAKGL---PDLERIV 768
Query: 520 TRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSP 579
+RI + +F+ V+ A K +L + E SKT+ L L ++P
Sbjct: 769 SRIHAKNCRIKDFLKVLSAFKTMNKGFSKL---ADESEDFDSKTI-------LGLLRNAP 818
Query: 580 AVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE-VARARKAVQSAKEELDSLINMCR 638
++ + S + D L + ++ E VA + + ++ L +
Sbjct: 819 DLLPNIKNVQSMYEPTEEKEADELVPQKGKDARYDEIVAEIEELEEGLEDHLKKF----Q 874
Query: 639 KQLGMRNLEFMSVSGIT--HLIELPANFK---VPLNWAKVNSTKKTIRYHSPEVLTALDQ 693
K LG++ + S G +L+E PA+ K VP +W+K TK RY + + Q
Sbjct: 875 KSLGIKLEYWHSHVGNKEIYLMETPASVKKEKVPKDWSKSGGTKAKTRYVVGSLQKTVRQ 934
Query: 694 LALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRP 751
L A E +A +EF + A++ A LDCL +LA S + RP
Sbjct: 935 LKEARENRNTAIKAFKFRLFEEFDTDRVLWLRAIRVFAELDCLFSLAKSSAAIGEPSCRP 994
Query: 752 VFVDDHEPVQIHICSGRHPVLD-TILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIR 810
FV+ + + RHP L + L +F+PND L + ++TGPNM GKS +R
Sbjct: 995 EFVEG-DAAFVDFEQLRHPTLCLSTNLKSFIPNDVKLGGDEGKIALLTGPNMAGKSTVMR 1053
Query: 811 QVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCT 870
A+ IMAQ+G VPA+ A+L +D I TRMGA D++ STF EL+E ILR+ T
Sbjct: 1054 MTAVGVIMAQLGMLVPAARAKLCPVDSIITRMGAYDNMFSNASTFKVELDECCKILRDAT 1113
Query: 871 AQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGT 930
+SLVI+DELGRGTST DG+AIA A L L H + F THY + D F
Sbjct: 1114 PKSLVILDELGRGTSTFDGMAIAAAVLHQLATHTLPLSFFATHYSSLTD---DF-----A 1165
Query: 931 YHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIA 990
YH + H M + + +D+ +++K+V GV+ESSFG VA LA +P + RA VI+
Sbjct: 1166 YHPNIRNMH--MSTIVDEEKRDLVFMFKLVEGVAESSFGTHVANLAGVPLPVVERADVIS 1223
Query: 991 AKLEAEVSSRVQNR 1004
+ ++Q +
Sbjct: 1224 KTFAQQFKEKLQTK 1237
>gi|297617257|ref|YP_003702416.1| DNA mismatch repair protein MutS [Syntrophothermus lipocalidus DSM
12680]
gi|297145094|gb|ADI01851.1| DNA mismatch repair protein MutS [Syntrophothermus lipocalidus DSM
12680]
Length = 876
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 281/932 (30%), Positives = 426/932 (45%), Gaps = 150/932 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP+ +Q +K +YPD +L +G + F EDAE+AA++L I +P
Sbjct: 3 KLTPMMEQYRAIKEQYPDCILFFRLGDFYEMFFEDAEIAAQILEIVLTARDGGSGVKVPM 62
Query: 148 FRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+ H + RL+ G++V + +Q E A+ G R + + T T+
Sbjct: 63 CGVPFHAADTYISRLIAKGYRVAICEQVEDPALTK------GLVKREVVRVITPGTVV-- 114
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
DV E GE+NYLV + +++ +G + +++STGD E
Sbjct: 115 -DVSMLE---AGENNYLVALAENESAIG----------------LAVIDVSTGDFQATEV 154
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+ S + + L L PAE L+ P Q E +L + N V + A
Sbjct: 155 SGPEASSLVLSELYRLRPAECLI--PAWTQRESILYEFTEKFQNSVVTEMDPTYYQYAWA 212
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
A++ +E ED + + P + I + A ++HL +
Sbjct: 213 EAKLREFFEV--EDLVELGLES---CPAAVIAAAVIVAFLESTCRA------QLKHLSRI 261
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
R+ + L NT + LE+ RN +G G+LL +++ T G R
Sbjct: 262 ------------RTYQPREYLGLDVNTRRNLELTRNLKDGKREGSLLAVIDCCRTAMGRR 309
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LL+RW+ PL D I+ RLDAV E+ S + +
Sbjct: 310 LLQRWLEQPLVDVKAINERLDAVEEMYNS---------------------------FSLR 342
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDGEYREKVT 560
+ LG DI+R RI A+P E +A+ ++ L A K L E R +
Sbjct: 343 ERIREILGDVHDIERLAGRIGSGVASPRELLALKNSLINLPAFKALLP-----EVRTHLL 397
Query: 561 SKTLHSALLK---RL---ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
K L L+ RL +L ++PA I + II G
Sbjct: 398 KKILELDTLEDVYRLLDSVLDENAPASIREGG--------------------IIKPGCNP 437
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAK 672
EV RK KE L R++ G+++L+ F V G + P VP ++ +
Sbjct: 438 EVDELRKLAFEGKEWLLEYEQGERERTGIKSLKLGFNRVFGYFIEVTKPNVHLVPSHYVR 497
Query: 673 VNSTKKTIRY-------HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
+ RY + +VL+A ++L L +EL V R +E + + Q
Sbjct: 498 KQTLVNAERYITDDLKNYEEKVLSARERLVLLEQELFQVLR-------EEVACHVSRLQE 550
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPND 784
ALA LD + LA + ++VRP+ VDD + I + +GRHPV++ L ++FVPND
Sbjct: 551 VAGALAKLDVIACLAETAFRHDYVRPL-VDDSDV--IFVKNGRHPVVERFLGSESFVPND 607
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T L + IITGPNMGGKS Y+RQVALI I+AQVGSFVPA+ A + V+D ++TR+GA
Sbjct: 608 TYLDDKERRLAIITGPNMGGKSTYMRQVALITILAQVGSFVPATEARIGVVDQVFTRVGA 667
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
SD + G+STF+ E+ E ++IL+N T +SLVI+DE+GRGTST DG++IA A L+++ H
Sbjct: 668 SDDLVGGQSTFMVEMVEVAHILKNATRKSLVILDEIGRGTSTFDGMSIAQAVLEHICSHI 727
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
LF THY ++ + G V VS +S V +L KV+PG +
Sbjct: 728 GAKTLFATHYHELTGLDEVLPG-VFNLSVSV-----------KESAGAVIFLKKVIPGRA 775
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ S+G +VA LA LP I RA I LE++
Sbjct: 776 DKSYGIQVAGLAGLPVGVIQRAGEILRSLESK 807
>gi|66827461|ref|XP_647085.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
gi|74897500|sp|Q55GU9.1|MSH6_DICDI RecName: Full=DNA mismatch repair protein Msh6
gi|60475825|gb|EAL73760.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
Length = 1260
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 251/948 (26%), Positives = 420/948 (44%), Gaps = 131/948 (13%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K++P E+Q ++K+K D ++ + G + + DA++ + L + N +P
Sbjct: 359 KFSPFERQFWDIKSKNYDTVVFFKKGKFYELYESDADIGHQQLHLKLTDRVNMRMVGVPE 418
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP-------FGRGLSALYTKATLE 200
N +L++ G KV V Q ET+ A + G R L+++ T TL
Sbjct: 419 MSFNHWASKLIHLGHKVAKVDQMETSIGMAKRQNEKGGRNKKDSIIQRELTSILTAGTLL 478
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ + S YL+ + +++ +D + GV V++S G+
Sbjct: 479 DEQMI------TDQTSTYLMAIKENE--------------YDKQYGVCFVDVSIGEFYLC 518
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQ----PLSKQTEKMLLAYAGPASNVRVECASRDC 316
D R E +LL + P E++ + P + K +L+ P N R+ D
Sbjct: 519 TIQDDDNRMQFETLLLQMMPKEIVYEKGATSPKTISIMKRVLSTVKPVMNARLSLEYWD- 577
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
+ + L +TL M + + AL I
Sbjct: 578 --PTDTMERITQLCGGKTPETLCQ---------------------MKNEEYLMGALGGCI 614
Query: 377 RHLKQFGLERIMCLGASFRS---LSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
+L + + A F+ L M L L LE+ N+++GS GTL +M+
Sbjct: 615 SYLMDIKIGNSVVEQARFKRFNPLDIGNSMILDGQCLVNLEIFNNSTDGSTEGTLFKLMD 674
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T +G R+ R+W+ PL ++N I R A+ + +S
Sbjct: 675 RCTTAFGKRMFRQWICRPLANKNAIVDRQKAIEFLRDS---------------------- 712
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
P+ L V L + PD++R I RI +T+ S+ I+V+ +L +L +
Sbjct: 713 --PE---TLQKVTAILNKLPDLERMIARIRAQTSKISDLISVLNHFDNIHSKLLELLDEA 767
Query: 554 EYREKVTSKTLHSALL------------------KRLILTASSPAVIGKAAKLLSTVNKE 595
E ++ S L S L I + P + + V K
Sbjct: 768 E---QIESIHLRSCLFMDNQQDNDDIDEQENSNNNNNIRYSGYPNL----KPYIERVRKS 820
Query: 596 AADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT 655
+ D + + S G F E + +QS ++ + + +E+ +
Sbjct: 821 FTIEQDRV---VPSKGLFLEFDQCLGNIQSLEQSFAKHLEEQKAHFKCNKIEYKHMGKEI 877
Query: 656 HLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
+ IE+P F K+P ++ +S+ K RYHSP V L L + ++ + L
Sbjct: 878 YQIEIPVAFTKKLPAGFSLKSSSSKVNRYHSPFVTKNLTSLLEERDTYEVLSKEVLKKIL 937
Query: 714 KEFGGYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVFVDDHEPVQIHICSGRHPV 771
F Y+ FQ A+ L+ LDCL +L +S + RP+FV + I + RHP
Sbjct: 938 SNFAIYFNHFQIAITKLSQLDCLLSLYKVSFQSSIQMCRPLFVSSDQRGFIDVKDMRHPC 997
Query: 772 LDTILLDNFVPNDTNLHAERE--YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
+ + D+F+PND +L+ E ++TGPNMGGKS +RQ ++ IMAQ+G +V ASS
Sbjct: 998 IYSKSGDDFIPNDISLNTENNPPSLMVLTGPNMGGKSTLLRQSCILVIMAQMGCYVSASS 1057
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
E+ ++D I+TR+GA+D+I G+STF+ EL E S +L+ T +SLVI+DELGRGTST DG
Sbjct: 1058 CEMSIVDRIFTRLGANDNILAGQSTFMVELAETSAVLKYATKRSLVILDELGRGTSTFDG 1117
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSV-GTYHVSYLTSHKVMGPMDSK 948
+IAY+ L+YL + M +F THY +A + +V +Y+T H +D +
Sbjct: 1118 YSIAYSVLNYLATKVQSMCIFATHYQSLA-----YEPTVRDLISTAYMTCH-----VDEE 1167
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ + V +LYK+ GV +S+G VA +A LP I++A + ++E +
Sbjct: 1168 A-KKVIFLYKLASGVCPNSYGLHVASMAGLPREIITKAEEKSTQMEKD 1214
>gi|392589317|gb|EIW78648.1| DNA mismatch repair protein Msh6 [Coniophora puteana RWD-64-598 SS2]
Length = 1270
Score = 309 bits (792), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 280/993 (28%), Positives = 437/993 (44%), Gaps = 145/993 (14%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVG-------YK 115
P +P P TL P S K++TP E+Q E+K + D +L + G Y+
Sbjct: 324 PGEPGYDPRTLY---VPKSAW---KQFTPFEKQFWEIKQNHFDTVLFFQKGKFLEARSYQ 377
Query: 116 FRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA-- 173
+ +DA + + + +P N + + G+KVG V Q ETA
Sbjct: 378 ESLYEDDARIGHREFDLKLTHRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVDQAETALG 437
Query: 174 ------AIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDD- 226
K GK R L+ ++T TL VDDD
Sbjct: 438 AEMRLAKSKGEDGGKDKIVRRSLNKVFTNGTL-----------------------VDDDL 474
Query: 227 ------GNVGKIRN-GVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLS 279
G+ +R G ++ +T F D + LE ++ L
Sbjct: 475 LTDEQAGHCISLRELPPVSTSAKPSFGACVLDSATSQFNLSFFEDDVCLTRLETLVRQLR 534
Query: 280 PAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTL 338
P E++ + LS T ++L A PA+ + + + L E+ +++ G +
Sbjct: 535 PKEVVFTKGNLSVATTRLLKAIL-PAACLWTSLRDVEGYDYDQTLTELNTMF---GPGS- 589
Query: 339 SNNEDQNMD-----------VPEQ----GNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
S NED+ MD +P++ + RSAIE L A + +LKQ
Sbjct: 590 SANEDETMDADDGDSALSSAIPQEIRDMASCRSAIEA------LGAMAWYVDAPYLKQLN 643
Query: 384 LERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
++R + +F + + L TL +EVL N + G++ G+L ++N +T +G
Sbjct: 644 IDRDLLTMRNFNVYDPMKRGQNLVLDGQTLAHVEVLMN-TEGNDDGSLHKMLNRCITPFG 702
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RL R W+ PL D I++RLDAVS++ E P F
Sbjct: 703 KRLFRIWLCVPLRDVKDINSRLDAVSDLME------------------------HPTFEQ 738
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
S ++ + PD++R ++RI + +FI V+ + K +L + E+
Sbjct: 739 AFSELVKGM---PDLERIVSRIHAKNCKVKDFIKVLTSFKKLSKGFAKL---ADTSEEFE 792
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLS--TVNKEAADQGDLLNLMIISNGQFSEVAR 618
SKT+ L L S+P + + S TV+K+A ++++ G+
Sbjct: 793 SKTI-------LGLLRSAPDLEPHIDNVESRYTVDKDA-------DMLLPVEGKDDVYDE 838
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT--HLIELPANFKVPLNWAKVNST 676
+ ++EL+ + +K+LG+ + S G +L++ VP NW K T
Sbjct: 839 VMCEIGELEKELEGELKKFQKKLGIPLTWWHSAIGNKEIYLVQTKPGDDVPDNWVKNGGT 898
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
K +RY P + + +L A E + + EF + AV+ LA LDCL
Sbjct: 899 KNAVRYVVPSLQATIRRLKEARENRGTAVKEFKNRLFAEFDADRGVWLRAVRVLAELDCL 958
Query: 737 HALATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
+L+ S + RP FV+ + + RHP L ++L D F+PND L E
Sbjct: 959 FSLSKSSSALGEPMCRPEFVE-GDAASMEFEELRHPTL-SLLKDTFIPNDVKLGGEVGRI 1016
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
++TGPNMGGKS +R A IMAQ+G FVPA SA + +D I TRMGA DS+ ST
Sbjct: 1017 ALLTGPNMGGKSTVMRMTATGVIMAQLGMFVPAKSARICPVDAILTRMGAYDSMFSNAST 1076
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F EL+E ILR+ T +SLVI+DELGRGTST+DG+AIA A L L H + F THY
Sbjct: 1077 FKVELDECCKILRDATPRSLVILDELGRGTSTYDGMAIAGAVLHQLATHTLPLTFFATHY 1136
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
+ D F YH + H M + +++ +LYK+V GV+ SFG VA
Sbjct: 1137 GSLTD---DF-----AYHPNIRNMH--MSTLVDDEKRELVFLYKLVDGVATGSFGTHVAN 1186
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
LA +P S + RA V++ + +++++R K
Sbjct: 1187 LAGVPSSVVERADVVSKDFAKQFKAKLEDRQKK 1219
>gi|302657967|ref|XP_003020694.1| hypothetical protein TRV_05220 [Trichophyton verrucosum HKI 0517]
gi|291184551|gb|EFE40076.1| hypothetical protein TRV_05220 [Trichophyton verrucosum HKI 0517]
Length = 1217
Score = 309 bits (791), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 269/965 (27%), Positives = 441/965 (45%), Gaps = 117/965 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL IP P + T K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 300 PDYDPRTLY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYENDATI 353
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------AIKA 177
++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 354 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKG 413
Query: 178 HGPGKAGP----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
+ GKA R L+ + T TL + G S Y CV I+
Sbjct: 414 NKMGKAQKEDKVIKRELACVLTTGTLVEGSMIQGDM------STY--CVA--------IK 457
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
+ DG G+ V+ +TG +F D + E + P ELLL + +S +
Sbjct: 458 EAII-DGLPA-FGISFVDTATGQFFLSQFVDDVDMTRFETFVAQTRPQELLLEKSAMSTK 515
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
++L GP + ++ G +E + T+ + + V E
Sbjct: 516 ALRILKNNTGPTTLWN--------YLKPGK-----EFWE--ADVTVRELDAGSYFVSEDK 560
Query: 353 NHRSAIEGIMNM---PDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLS 406
NH SA + DL + A +++L+ R ++ +G + + + + L
Sbjct: 561 NHASAWPQALQDARDKDLVMSAFGALLQYLEMLKTGRDLITIGNFTWYDPIKKASSLVLD 620
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TL LE+ N +GS GTL ++N +T +G RL ++WV HPL D I+ARLDAV
Sbjct: 621 GQTLINLEIFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLDAVE 680
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
+ N+D T+ E QF SS LT + PD++R I+R+ T
Sbjct: 681 SL-------------------NADSTVRE-QF----SSQLTKM---PDLERLISRVHAGT 713
Query: 527 ATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
+F+ V++ +Q++ + G +E + L L+ ++ P + G
Sbjct: 714 CKAQDFVRVLEGF----EQIE--YTMGLLKEAGSGHGLIGQLI------SAMPDLNGLLK 761
Query: 587 KLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
+ ++ A + D+L + G E ++K ++ ++EL+ ++ R++L +
Sbjct: 762 FWETAFDRSKARESDIL---VPEEGIEEEFDASKKNIEQLEDELEQVLQRTRRELKCSTI 818
Query: 647 EFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
F + +E+P K +P +W ++++TK+ RY+ PE+ + +L A E V
Sbjct: 819 VFKDNGKEIYQLEVPIKIKNIPKSWDQMSATKQVKRYYFPELRALIRKLQEARETHAQVV 878
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIH 763
+ F F Y+ + AAV+ +A LDCL LA S RP FVDD V +
Sbjct: 879 KGVAGRFYARFDKDYSSWLAAVKIIAQLDCLIGLAKASTALGHPSCRPTFVDDERSV-LD 937
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
RHP + + D F+PND L + ++TG N GKS +R IMAQ+G
Sbjct: 938 FQELRHPCMMPNVGD-FIPNDVKLGGDTSNINLLTGANAAGKSTVLRMTCTAVIMAQIGC 996
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
+VP A L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRG
Sbjct: 997 YVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRG 1056
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
TS++DGVA+A A L ++ H + F THY +A +F G + + ++
Sbjct: 1057 TSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEGH------PEIAARRMRI 1107
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+D +++ VT+LYK+ GV+E SFG A + +P + A V A + E +SR++
Sbjct: 1108 HVDD-AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEVAAKQWEH--TSRMKE 1164
Query: 1004 RSAKR 1008
KR
Sbjct: 1165 SLEKR 1169
>gi|358381647|gb|EHK19322.1| hypothetical protein TRIVIDRAFT_81241 [Trichoderma virens Gv29-8]
Length = 1208
Score = 309 bits (791), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 265/958 (27%), Positives = 446/958 (46%), Gaps = 111/958 (11%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
++P P P TL P + K++P E+Q E+K D ++ + G + +
Sbjct: 303 RSPTDPDYDPRTLYIPPIAWN------KFSPFEKQYWEIKQDLWDTIVFFKKGKFYELYE 356
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
+DA + + N +P L+ V + + +KV V+Q ET
Sbjct: 357 KDATIGHQEFDFKMTDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMETN------- 409
Query: 181 GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDD--GNVGKIRNGV 236
G+ + K + A+ V + GC + LV ++ DD I+ V
Sbjct: 410 -----LGKEMRERQDKT--KKADKVISRKLGCILTAGTLVDGSMLQDDMAAYCVSIKESV 462
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
D G+ + +TG F D R+ E ++ + P ELLL + LS ++ +
Sbjct: 463 VDDL--PAFGIAFTDTATGRFFLSGFVDDIDRTKFETLVAQIGPRELLLEKSGLSTKSLR 520
Query: 296 MLLAYAGPAS---NVRVECASRDCFIGGGAL-AEVMSLYENMGEDTLSNNEDQNMDVPEQ 351
+L P + N++ D L + E GED PE
Sbjct: 521 ILKNNTSPTTIWTNLKPGTEFWDADTTRRELDCAKYFVREEDGEDIW----------PE- 569
Query: 352 GNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSAN 408
A++ + + DL + A+ + +L+ LE + +F + + + L
Sbjct: 570 -----ALKELKD-DDLVMSAIGGLVSYLRFLKLEGPLLSQGNFEVYNPIQKNSTLVLDGQ 623
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL LE+ N NG+ GTL ++N +T +G RL R+WV HPLC+ + I+ RLDAV +
Sbjct: 624 TLTNLELFANTVNGNSDGTLFGLLNKCITPFGKRLFRQWVAHPLCNIDRINERLDAVELL 683
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
N D ++ E QF + L + PD++R I+RI
Sbjct: 684 -------------------NDDPSVRE-QF-------ASQLVKMPDLERLISRIHAGACK 716
Query: 529 PSEFIAVMQAILYAGKQLQ-QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK 587
P +F+ V++ +Q++ + + G ++ + L+ RLI S P + A
Sbjct: 717 PEDFVRVLEGF----EQIEYTMTLVGAFKG-------GNGLIDRLI--TSMPNLEEPLAY 763
Query: 588 LLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
+ +++ A + LMI +G + + ++ K +L+ L+ + +L + L+
Sbjct: 764 WSTAFDRQKAKEE---KLMIPESGVDEDFDASVARIEEVKNQLNDLLAEKKAELKCKTLK 820
Query: 648 FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRA 707
F + + IE P + K+P +W ++++TK R++ E+ + +L A E + + R
Sbjct: 821 FTDIGKEIYQIEAPKSVKIPSSWRQMSATKDVKRWYFTELTGLVRELQEAEETHSQLIRE 880
Query: 708 AWDSFLKEFGGYYAEFQAAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIHIC 765
F K+F Y + A++ +A LDCL +LA ++S + RP FVD+ V +
Sbjct: 881 VASRFCKKFDVDYETWLKAIKIIAQLDCLVSLAKASMSLGEPSCRPQFVDEERSV-LEFE 939
Query: 766 SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
RHP + + D+F+PND L ++ ++TG N GKS +R + IMAQVG FV
Sbjct: 940 ELRHPCMINTV-DDFIPNDIKLGGDQAKINLLTGANAAGKSTVLRMSCIAVIMAQVGCFV 998
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PA SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS
Sbjct: 999 PAKSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTS 1058
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPM 945
++DGVA+A A L ++ H C+ F THY +A T+F + + ++ +
Sbjct: 1059 SYDGVAVAQAVLHHVATHIGCIGFFATHYHSLA---TEFENH------PEIRARRMQIHV 1109
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
D + ++ +T+LYK+ GV+E SFG A + + I RA IAAK E E +SR+++
Sbjct: 1110 DDE-ERRITFLYKLEDGVAEGSFGMHCAAMCGISDRVIKRAE-IAAK-EWEHTSRLKD 1164
>gi|407928522|gb|EKG21378.1| hypothetical protein MPH_01370 [Macrophomina phaseolina MS6]
Length = 1185
Score = 309 bits (791), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 257/944 (27%), Positives = 433/944 (45%), Gaps = 106/944 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL P S K++ E+Q E+K+K+ D ++ + G + + DA +
Sbjct: 277 PDYDPRTLYIPPGAWS------KFSAFEKQYWEIKSKFWDTIVFFKKGKFYELYENDATV 330
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH----GPG 181
++ + N +P L++ + V G+K+ V Q E+A K GP
Sbjct: 331 GHQLFDLKLTDRVNMRMVGVPESSLDMWANQFVAKGYKIAKVDQMESALGKEMRERGGPA 390
Query: 182 KAGP--FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGVF 237
K R LS++ T TL V G +D S Y V + + V + VF
Sbjct: 391 KKEEKIIRRELSSVLTGGTL-----VDGAMLQDDM---STYCVAIKE----VDRDNLPVF 438
Query: 238 GDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKM 296
G F V+ +T EF D + E + P ELLL + +S + ++
Sbjct: 439 GIAF--------VDTATAQFQLCEFTDDADMTKFETFVAQTRPGELLLEKSCISAKALRI 490
Query: 297 LLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRS 356
L P + ++ + A E+ + D + + N++V Q
Sbjct: 491 LKNNTSPTTIWNYLKPGKEFWSADTAAREIEA------SDYFVSPDRDNIEVWPQ----- 539
Query: 357 AIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQL 413
+ +LA+ A ++L+ +E+ ++ LG A + + + + L +L L
Sbjct: 540 VLRDAKENHELAMSAFGALFQYLRMLKIEKDLVTLGNFAWYDPIRKATSLVLDGQSLINL 599
Query: 414 EVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMG 473
E+ N+ +G GTL ++N +T +G R+L++WV HPL D I+ RLDAV
Sbjct: 600 EIFANSFDGGTDGTLFSMLNRCITPFGKRMLKQWVCHPLADARKINQRLDAV-------- 651
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFI 533
D N+D T+++ SL + PD++R ++R+ +F+
Sbjct: 652 -----------DALNADTTVMD--------RFTASLSKLPDLERLLSRVHAGRIKAQDFV 692
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN 593
V++ + L GE ++ +LI + P + G +
Sbjct: 693 KVLEGFEQIEYTMSLLSEFGE----------GEGVIGQLI--SQMPDLAGSLKHWRDAFD 740
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
++ A + +L + G + ++++ V+S EL+ L+ R+ LG + +
Sbjct: 741 RKKAKEDGIL---VPEPGVEEDFDQSQENVESVLAELEKLLKQYRRDLGSTAICYKDNGK 797
Query: 654 ITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+ +E+P K VP +W +++ST K RY+SPE+ + +L A E + + F
Sbjct: 798 EIYQLEVPIKIKNVPKSWDQMSSTAKVKRYYSPELRRLVRKLQEAQETHGQIVKEVAGRF 857
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
F Y+ + AAV+ ++ LDCL +LA + S + RP FVD + + RHP
Sbjct: 858 YARFDEGYSVWLAAVKIISQLDCLISLAKASASLGEPSCRPKFVDSERAI-LEFEELRHP 916
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+ T + D F+PND L + ++TG N GKS +R + I+AQVG ++P SSA
Sbjct: 917 CMLTNVTD-FIPNDIKLGGQSANIDLLTGANAAGKSTVLRMTCIAVILAQVGVYLPCSSA 975
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +D I +R+GA D+I +STF EL+E IL T +SLVI+DELGRGTS++DGV
Sbjct: 976 TLTPVDRIMSRLGAQDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGV 1035
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
A+A + L ++ H C+ F THY +A T+F+G + + ++ +D K +
Sbjct: 1036 AVAQSVLHHIATHIGCLGFFATHYHSLA---TEFSGH------PEIAAKRMAIHVDDK-E 1085
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ VT+LY++ GV+E SFG A + + P I RA V A + E
Sbjct: 1086 RRVTFLYRLEDGVAEGSFGMHCAAMCGINPRIIERAEVAAKEWE 1129
>gi|154334684|ref|XP_001563589.1| putative mismatch repair protein MSH3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060610|emb|CAM42159.1| putative mismatch repair protein MSH3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1005
Score = 308 bits (790), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 306/1049 (29%), Positives = 460/1049 (43%), Gaps = 204/1049 (19%)
Query: 84 THNKKYTPLEQQVVELKTKY-PDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT 142
T TPLEQQVV LK P V+LM+ GY+ +F+G D+ ++ +GI F
Sbjct: 30 TEGVSLTPLEQQVVALKESISPHVILMVACGYRVKFYGSDSRAVSRRVGIMCIPGQPFEY 89
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL--- 199
+S P RL+++V RLV G+ VGV Q E+AA++A K+G F R +S LY++ TL
Sbjct: 90 SSFPYTRLDLYVHRLVAMGYHVGVADQ-ESAAMRAADGLKSGLFTRSVSQLYSRGTLLPT 148
Query: 200 ------------------EAAEDVGGG---EDGCG----------------GESNYLVCV 222
A E+ G E+G G G S +C
Sbjct: 149 ERVSNSGGSGSSPGDASKTAVEESYAGAEAEEGNGNAIGWPEPHASPSSDSGTSELFLCF 208
Query: 223 VDDDGNVGKI--RNGVFGDG-FDVR----LGVVAVEISTGDVVYGEFNDGFLRSGLEAVL 275
VD G+ RNG G G R L VV V T + + LE V
Sbjct: 209 VD----AGRCCSRNGTNGAGDASTRARPLLSVVLVSFVTQRCLRFDVRGAI---ELEDVT 261
Query: 276 LSLSPAEL--LLGQPLSKQTEKMLLAYAGPASNVRVECASRDC--------FIGGGALAE 325
AE+ L QP SK EC SRD F+ AL E
Sbjct: 262 QRYDIAEVIVLTAQPPSK------------------ECGSRDVSSQRTTASFLK--ALPE 301
Query: 326 VMS------LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
V + L N G +N E+ DV G +A + I D A++A R
Sbjct: 302 VYATVLHHGLPLNFGPT--ANGEEDGKDVSVSGYVYAAGQSI----DAAIEAYLKPYRLD 355
Query: 380 KQFGL--------ERIMCLGA----------SFRSLSGSME-MTLSANTLQQLEVLRNNS 420
+ +GL +C ++ S S+ + L TL+ L+V +S
Sbjct: 356 QVYGLLCARGGLAAESLCENEEAAAASSPAHNYASTGSSLHCLHLPGPTLRALDVF--HS 413
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
+ G+L+ +++H++T GSR LRRW+ PLC+R+ I AR + + +
Sbjct: 414 SVGLRGSLIGLLDHSITPCGSRCLRRWLAAPLCERSSIVARQEVLVYL------------ 461
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
+G D + +L R D++ +++++ EF+ ++ +
Sbjct: 462 MGHKDNGQ-------------VEDLLRECARLGDVEAVVSKLYAERCQVVEFVRLLHMLR 508
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI----GKAAKL--LSTVNK 594
A QL +GE ++S + LL +L+ AV G AA L +T
Sbjct: 509 SASVLAAQL-CNGESDVDLSS-SRPPPLLAQLLAAVHGAAVTRLLEGHAALLRTAATTPL 566
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
E +G + + + KA Q+A+ L + + RK L + LE+ ++ G
Sbjct: 567 EFFTEGG----CAVPDALLPHL----KARQAAETALQAELEAARKALNLPGLEYRTICGT 618
Query: 655 THLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
++++PA VP +W TK +RYH+P + L A E L++ AAW
Sbjct: 619 PFVLDVPAGKCAHVPSDWLVHTRTKTNVRYHTPIITEQHTALTAAAERLSLAAAAAWKQH 678
Query: 713 LKEF---GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV-----------DDHE 758
++ V+A+A+LD L +LA +S++ +V P V
Sbjct: 679 QRDTVADAEVMRVLAGVVEAVASLDALRSLAVVSQHPGYVMPALVALPACAPLSSTSVSS 738
Query: 759 PVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIM 818
PV + I GRHP+LD +L +V D L + ++TGPNMGGKS +R V ++
Sbjct: 739 PVALTISQGRHPILDRLLPHGYVSCDVQLRVGGAW--LLTGPNMGGKSALMRMVGTFVVL 796
Query: 819 AQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCT-AQSLVIV 877
AQ+G VPA +AEL V +G+Y RMGASDSI +G STFL E++E S ILR SLV++
Sbjct: 797 AQMGCGVPADAAELPVFEGVYCRMGASDSIIEGASTFLSEMDETSRILRAPQLPHSLVLM 856
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD----------------IK 921
DELGRGTS+ DG A+A ATL+YLL+ ++ LFVTHY + D
Sbjct: 857 DELGRGTSSFDGAAVAAATLEYLLD-RRATTLFVTHYCYLCDPYVAQGTTGGGEGEKGAS 915
Query: 922 TKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPS 981
V Y++ + S P + + + + Y GV+ SSFG + + A LP
Sbjct: 916 VDEARDVTCYYMGFKES-DTSSPTEHGTKPSLIFTYTPCRGVTPSSFGVAIGREAGLP-- 972
Query: 982 CISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
+ T A++L AE Q ++DL
Sbjct: 973 --TEVTDAASRLSAEAE---QQHRMRQDL 996
>gi|340518207|gb|EGR48449.1| DNA repair protein [Trichoderma reesei QM6a]
Length = 1205
Score = 308 bits (789), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 265/960 (27%), Positives = 444/960 (46%), Gaps = 113/960 (11%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P P T+ P + K++P E+Q E+K D ++ + G + +
Sbjct: 298 RPPTDPDYDPRTIFIPPGAWA------KFSPFEKQYWEIKQDLWDTIVFFKKGKFYELYE 351
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
+DA + + N +P L+ V + + +KV V+Q ET
Sbjct: 352 KDATIGHQEFDFKMTDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMETN------- 404
Query: 181 GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDD--GNVGKIRNGV 236
G+ + K+ + A+ V + GC + LV ++ DD I+ V
Sbjct: 405 -----LGKEMRERQDKSG-KKADKVISRKLGCILTAGTLVDGSMLQDDMAAYCVAIKESV 458
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
D G+ + +TG F D R+ E ++ + P ELLL + LS ++ +
Sbjct: 459 VDDL--PAFGIAFTDTATGKFFLSGFVDDVDRTKFETLIAQIGPRELLLEKSGLSTKSLR 516
Query: 296 ML---------LAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNM 346
+L + P + SR G + E + + L +D ++
Sbjct: 517 ILKNNTSPTTIWTHLKPGTEFWDADTSRRELSCGKYFLKAEGEEEEVWPEALQELKDNDL 576
Query: 347 DVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLS 406
+ SAI G+++ ++ L L L Q E ++ + + + L
Sbjct: 577 VM-------SAIGGLVSY----LRFLKLEAPLLSQGNFE-------VYKPIQKNGTLVLD 618
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TL LE+ N NG+ GTL ++N +T +G RL R+WV HPLCD I+ RLDAV
Sbjct: 619 GQTLTNLELFSNTVNGNTDGTLFGLLNKCITPFGKRLFRQWVAHPLCDIARINERLDAVE 678
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
+ N D ++ E QF + L + PD++R I+RI
Sbjct: 679 LL-------------------NDDPSVRE-QF-------ASQLVKMPDLERLISRIHAGA 711
Query: 527 ATPSEFIAVMQAILYAGKQLQ-QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
P +F+ V++ +Q++ + + G ++ + LL RLI +S P +
Sbjct: 712 CKPEDFVRVLEGF----EQIEYTMTLVGAFKG-------GNGLLDRLI--SSMPNLEEPL 758
Query: 586 AKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
A + ++ A + LMI +G + + ++ K +LD L+ + +L +
Sbjct: 759 AYWSTAFDRRRAKEE---KLMIPESGVDEDFDASVARIEEIKSQLDDLLAEKKTELKCKT 815
Query: 646 LEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
L+F + + IE P + K+P +W ++++TK R++ E+ T + +L A E + +
Sbjct: 816 LKFTDIGKEIYQIEAPKSVKIPSSWRQMSATKDVKRWYFTELTTLVRELQEAEETHSQLI 875
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIH 763
R F K+F Y + A++ +A LDCL +LA ++S + RP FV++ V +
Sbjct: 876 REVASRFCKKFDVDYETWLKAIKIIAQLDCLVSLAKASMSLGEPSCRPQFVEEERSV-LE 934
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
RHP + + D+F+PND L ++ ++TG N GKS +R + IMAQVG
Sbjct: 935 FEELRHPCMINTV-DDFIPNDIKLGGDQAKINLLTGANAAGKSTVLRMSCIAVIMAQVGC 993
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
FVPA SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRG
Sbjct: 994 FVPARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDELGRG 1053
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
TS++DGVA+A A L ++ H C+ F THY +A T+F + + ++
Sbjct: 1054 TSSYDGVAVAQAVLHHVATHIGCIGFFATHYHSLA---TEFENH------PEIRARRMQI 1104
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+D + + +T+LYK+ GV+E SFG A + + I RA IAAK E E +SR+++
Sbjct: 1105 HVDD-AQRRITFLYKLEDGVAEGSFGMHCAAMCGISDRVIKRAE-IAAK-EWEHTSRLKD 1161
>gi|261367034|ref|ZP_05979917.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
15176]
gi|282571152|gb|EFB76687.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
15176]
Length = 872
Score = 308 bits (789), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 274/926 (29%), Positives = 420/926 (45%), Gaps = 123/926 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ QQ E+K ++P+ +L VG + F +DA A++ L G +
Sbjct: 7 SPMMQQYFEIKKQHPNEILFYRVGDFYEMFYDDALTASRELELTLTGKNCGKEERAPMCG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P +V RL+ G+KV + +Q E A+ G R + + T T+ E
Sbjct: 67 VPFHSYETYVARLIAKGYKVAICEQMEDPALAK------GLVKRDIIRVVTPGTV--IES 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
ED ++NYL + K R G + R G+ +ISTG+ E N
Sbjct: 119 SMLAED----KNNYLCSIY------CKRRRGHW------RAGICFADISTGEARATELNA 162
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
+ + L P+E+L+ P+ K + Y ++ VE C+ +
Sbjct: 163 EKIGGAIITELCRYMPSEILICPPMLDF--KDVTGYIKQHTSALVELREEACYKDALLES 220
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ + TL +ED VP AV AL ++ ++ GL
Sbjct: 221 TMAGQFGPEWRTTLGYDEDAL--VP-----------------YAVAALLNYLQETQKHGL 261
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
ERI + + + + M LS T LE+ + GTLL +++ T T G RLL
Sbjct: 262 ERI----KTVDNYADAQYMRLSPVTRANLELTETMRGREKRGTLLWVLDKTETSMGKRLL 317
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
R W+ PL D I+ARL AV + + ++ + D K + LS
Sbjct: 318 RSWIEQPLVDAEAINARLSAVQAL--------YTANIARADLKEA------------LSH 357
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
V DI+R TRI + +ATP E A+ G +L K +
Sbjct: 358 VF-------DIERLTTRILYGSATPREVKAL-------GDTCARLP-----EVKTQASAC 398
Query: 565 HSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIISNGQFSEVARARKA 622
+ LL +L I LL + D L + I G SEV R
Sbjct: 399 GAPLLTQL------ADQIDPLDDLLQKITTALVDDPPATLKDGGAIRAGYNSEVDELRDI 452
Query: 623 VQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF--KVPLNWAKVNSTKK 678
+ K L +L R++ G+ L+ F V G + IE+ ++ VP ++ + +
Sbjct: 453 MHGGKGYLANLETKLREETGIPKLKIGFNKVFG--YYIEVSRSYTDSVPDSFTRKQTLTT 510
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
RY +PE+ +++ ANE L ++ + L E Q A+A LD L
Sbjct: 511 GERYITPELKELENKILGANERLLVLEHQLFADLLSEISAQIVRIQRTALAVAQLDVLAG 570
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQII 797
A ++ N+V PV D V I I GRHPV++ +L FVPNDT L +I
Sbjct: 571 FAEVALQNNYVLPVV--DQSGV-IEIKEGRHPVIEQMLKGTLFVPNDTLLDEGENRMLLI 627
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS Y+RQ ALI +MAQ+G FVPA+SA + V+D I+TR+GASD + G+STF+
Sbjct: 628 TGPNMAGKSTYMRQNALIALMAQIGCFVPAASAHIGVVDAIFTRVGASDDLAAGQSTFMV 687
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
E+ E + ILR+ + SLVI+DE+GRGTST DG++IA A ++Y+ ++ C LF THY ++
Sbjct: 688 EMTEVAEILRHASKNSLVILDEIGRGTSTFDGMSIARAVVEYICDNIGCKTLFATHYHEL 747
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
+ G V Y+++ K +D+T+L ++V G ++ S+G +VA+LA
Sbjct: 748 TSMDQDIYG-VKNYNIAV-----------KKRGEDITFLRRIVAGPADDSYGIEVAKLAG 795
Query: 978 LPPSCISRATVIAAKLEAEVSSRVQN 1003
LP S RA + +LEA R Q
Sbjct: 796 LPSSVTKRAHAVLRQLEASAPGRNQT 821
>gi|320593113|gb|EFX05522.1| DNA mismatch repair protein [Grosmannia clavigera kw1407]
Length = 1190
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 266/940 (28%), Positives = 434/940 (46%), Gaps = 121/940 (12%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K++P E+Q E+K K D ++ + G F + DA + ++ + N +P
Sbjct: 301 KFSPFEKQYWEIKQKLWDTIVFFKKGKFFELYENDATIGHQLFDLKLTDRVNMRMVGVPE 360
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
L++ V + V G+KV V Q E+A K RG SA+ +K + +
Sbjct: 361 SSLDMWVNQFVAKGYKVARVDQMESALGKEMRE-------RGASAVKSKQ-----DKIIR 408
Query: 208 GEDGCGGESNYLV--CVVDDDGNV--GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
E C LV ++ DD I+ V DG V G+ V+ +TG + EF
Sbjct: 409 RELACVLTRGTLVEGSMLQDDMATFCAAIKQDVV-DGKPV-FGIAFVDAATGQFFFSEFE 466
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPAS--NVR--------VECA 312
D + E + ++P EL+L + +S + ++L P + N R +
Sbjct: 467 DDAELTKFETFVAQMAPQELILEKNCISTKALRILKNNTTPMTIWNYRKSGSEFWDADTT 526
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
R+ GG + ++ N D P++ + + P L + A
Sbjct: 527 RRELDCGG----------------YFTADDGGNEDWPKK------LAEVREKPFL-MSAF 563
Query: 373 ALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
+ +L+ LER + A+F + + + L TL LE+ N NG GTL
Sbjct: 564 GALVNYLRDLKLERNLVSQANFEMYNPIHRNGTLILDGQTLINLEIFSNTVNGGPEGTLF 623
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++N +T +G RL R+W+ HPLCD I+ RLDAV D N+
Sbjct: 624 NLLNRCITPFGKRLFRKWLCHPLCDIRKINERLDAV-------------------DMLNA 664
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA---ILYAGKQL 546
D ++ + QF + + + PD++R +RI + +F+ V++ I Y L
Sbjct: 665 DRSLRD-QFS-------SEMCKMPDLERLASRIHAGSCKAEDFVRVLEGFEQIEYTMGLL 716
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
+ L+ + L+ RL+ A+ P + + + +++ A + LL
Sbjct: 717 RVLN-------------GGNGLVDRLL--AAMPDLNEPLSYWKTAFDRKRAREDKLLIPE 761
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKV 666
+ F E A A+ K +L S++ + +L RN +F V + +E+P KV
Sbjct: 762 RGIDEDFDECA---DAITGIKGKLQSVLERSKAELKCRNAKFTDVGKEIYQVEVPKATKV 818
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P +W ++++ R++ E+ + L A E + + R A F K F +Q A
Sbjct: 819 PKSWRQMSANNAVRRFYFAELDELVRGLQEAEETHSQLTREAALRFCKRFDADAEIWQEA 878
Query: 727 VQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGRHP-VLDTILLDNFVPN 783
++ +A LDCL +LA S + + RP FVD+ V + RHP +L+T+ D+F+PN
Sbjct: 879 IRIIAQLDCLISLAKASSSLGQPSARPTFVDEERSV-VEFEELRHPCMLNTV--DDFIPN 935
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D L + ++TG N GKS +R + IMAQ+G +VPA SA L +D I +R+G
Sbjct: 936 DIRLGGDAANISLLTGANAAGKSTILRMSCIAVIMAQIGCYVPAVSARLTPVDRIMSRLG 995
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGVA+A A L ++ H
Sbjct: 996 ANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVASH 1055
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
C+ F THY +A T+F H K M + ++ VT+LY++ GV
Sbjct: 1056 IGCVGFFATHYHSLA---TEFEN-----HPEICA--KRMQILVDNENRRVTFLYRLEDGV 1105
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+E SFG A + +P I A V A E E +SR+++
Sbjct: 1106 AEGSFGMHCAAMCGIPDRVIEEAEVAAR--EWEHTSRLKD 1143
>gi|225682190|gb|EEH20474.1| DNA mismatch repair protein Msh3 [Paracoccidioides brasiliensis Pb03]
Length = 1066
Score = 308 bits (788), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 251/424 (59%), Gaps = 19/424 (4%)
Query: 574 LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSL 633
+ A+ PA+ L+ +N AA Q D N S + E+ + + + L
Sbjct: 609 VIAALPAIREDIVTYLNKINAHAAKQDDKYNFFRESE-ETEEILESNLGIADVEHRLKEH 667
Query: 634 INMCRKQLGMRNLEFMSVSGITHLIEL---PANFK-VPLNWAKVNSTKKTIRYHSPEVLT 689
+ + LG + +++ +V+GI +LIE+ P N K VP +W K++ TKK R+H+PEV+
Sbjct: 668 CAVAAEILGKKKVQYATVAGIEYLIEVENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQ 727
Query: 690 ALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFV 749
+ + E L C A+ + L + Y EF+ +QALA LDCL +LA ++ +V
Sbjct: 728 YIRERDQFKEALAAACDKAFHALLADISKKYQEFRDCIQALAKLDCLLSLANIASQPGYV 787
Query: 750 RPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
+P + D+ I I GRHP+++ +LLD+FVPNDT L ++TGPNMGGKS Y+
Sbjct: 788 KPTYTDE---TCISIQRGRHPMVEQLLLDSFVPNDTELQTNETRALLVTGPNMGGKSSYV 844
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
RQVALI IM Q+GS+VPA SA L +LD +YTRMGA D++ G STF+ EL+E + ILR
Sbjct: 845 RQVALITIMGQIGSYVPADSATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILRQA 904
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSV 928
T +SLVI+DELGRGTSTHDGVAIA+A LDY++ + + LF+THY ++ F G +
Sbjct: 905 TPRSLVILDELGRGTSTHDGVAIAHAVLDYMVRDLRSLTLFITHYQSLSSQALNFPEGEL 964
Query: 929 GTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
H+ + M+S D +D+T+LY V G + S+G VA+LA +P S + A
Sbjct: 965 RNVHMKF---------MESGVDGRDITFLYVVGEGEAHRSYGLNVARLANVPSSVLDVAA 1015
Query: 988 VIAA 991
+A
Sbjct: 1016 TKSA 1019
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 217/397 (54%), Gaps = 45/397 (11%)
Query: 76 IPTPSSQTTHNKK-----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL 130
+P PS + KK TP+E+Q++E+K K+ D +L++EVGYKFRFFGEDA +AAK L
Sbjct: 225 VPPPSRKGRGAKKISASKLTPMERQIIEIKKKHMDTVLVVEVGYKFRFFGEDARVAAKEL 284
Query: 131 GIY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK 176
I AH F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+K
Sbjct: 285 SIVCIPGKFRFDEHPSEAHWTR-FASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAALK 343
Query: 177 AHGPGKAGPFGRGLSALYTKAT-LEAAEDVGG---GEDGCGGESNYLVCVVDDDGNVGKI 232
A G + PF R L+ LYTK T ++ ED+ G + Y++C+ + +
Sbjct: 344 AAGDNRNAPFVRKLTNLYTKGTYIDDVEDLEGPRCNSSSVSTSTGYMLCMTESNAK---- 399
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQ 292
+G+ V +G+VAV+ +TGDV+Y +F DGF+RS +E LL ++P E ++ +SK
Sbjct: 400 ---GWGNDEKVHVGIVAVQPATGDVIYDDFEDGFMRSEIETRLLHIAPCEFIIVGEMSKA 456
Query: 293 TEKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD 347
TEK++ +G +N+ RVE SR + + V S Y S + + D
Sbjct: 457 TEKLVQHLSGSKTNIFGDKMRVESVSRLKNAAVESHSHVASFYA-------SRMKARGTD 509
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSA 407
H +E ++ +P+ L+ I ++ Q+GLE + L F+ S M L+
Sbjct: 510 GDVTATH--LLEKVLRLPEDVTICLSSMIIYMSQYGLEHVFDLTKYFQPFSARSHMLLNG 567
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
NTL LE+ +N ++ + G+L ++ T T +G RLL
Sbjct: 568 NTLTNLEIYQNQTDHTSKGSLFWTLDRTKTKFGQRLL 604
>gi|333897075|ref|YP_004470949.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112340|gb|AEF17277.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 857
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 254/920 (27%), Positives = 448/920 (48%), Gaps = 137/920 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
YTP+ +Q +++K KY D +L +G + F +DA +A+K L I + A
Sbjct: 3 YTPMMEQYLKIKEKYKDSILFFRIGDFYEMFFDDAVIASKELEIVLTGKDCGQEERAPMA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G+KV + +Q E A G R + ++T T+
Sbjct: 63 GVPFHAADFYIDKLVKKGYKVAICEQLEDPAYAK------GLVERDVIRVFTPGTVINTN 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF- 262
+ +NYL+ + + GDG+ G+ V++ TG++ +
Sbjct: 117 SLEEKS------NNYLLSIFKE------------GDGY----GLSFVDVLTGELFVTQIT 154
Query: 263 --NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
ND +R + ++ SP+E++ A+ D F
Sbjct: 155 KCND--IRKIYDEIM-RYSPSEII---------------------------ANND-FFEL 183
Query: 321 GALAEVMS---LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
L ++++ ++ N + L+N ED + Q N RS + + A+++LA +
Sbjct: 184 KRLVKILNSSKVFINKYDKVLNNAEDI---IITQFN-RSLKDLKLERKKYAIKSLASVLL 239
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN-NSNGSEYGTLLHIMNHTL 436
+LK+ + L S M L NT++ LE++ + N + S+ GTLL +++ T+
Sbjct: 240 YLKEMQKVELKQLNNLTYYEDNSF-MLLDNNTIRNLEIVYSINRDHSKSGTLLSVLDQTV 298
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G RLL+RW+ PL D I+ RL++VSE+ Y+ G+ D ++
Sbjct: 299 TPMGGRLLKRWLEEPLIDVEKINYRLNSVSEL---YNDYK-----GRLDIRD-------- 342
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
IL + D++R +++ ++ + +++ +I K Q L
Sbjct: 343 ----ILKGIY-------DLERLSSKLVYQNINAKDLLSIKISIERLPKLKQLL------- 384
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
+K S L + +L +I K+ K + N + + II +G +
Sbjct: 385 DKYKSNYLKE-IFSKLDTLQDIHDLIDKSIKDDPSSNVKEGN--------IIKDGFDKNI 435
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVN 674
R+A K + +L + +++ G++ L+ + IE+ ++ VP N+ +
Sbjct: 436 DELRRASIDGKSWIANLESYEKEKTGIKTLKIGYNKVFGYYIEVSKSYISSVPENYIRKQ 495
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY +PE+ +++ A +L + +D ++ Q + +A LD
Sbjct: 496 TLANAERYITPELKEIEEKILGAETKLVEMEYEIFDRIREQIKNEIYRIQMTSRYIAILD 555
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L +LAT++ N+V+P+ + +I I GRHPV++TI+ D+F+ ND + +++
Sbjct: 556 VLVSLATVAETNNYVKPIV---NSSDRIVIKDGRHPVIETIMDDSFISNDIEID-DKKPI 611
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS Y+RQVALI +MAQ+GSFVPAS AE+ V+D I+TR+GASD + G+ST
Sbjct: 612 MIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYAEIGVVDRIFTRVGASDDLFSGQST 671
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+NE S IL + T SL+I+DE+GRGTST+DG++IA A L+Y+ + K +F THY
Sbjct: 672 FMVEMNEVSLILNSATKNSLIILDEVGRGTSTYDGMSIACAILEYIHDKIKAKTMFATHY 731
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ +++ K G + Y++S ++D ++ +L K++PG ++ S+G +VA+
Sbjct: 732 HELTNLEDKLDG-IKNYNISV-----------EETDDEIIFLRKIIPGAADKSYGIQVAK 779
Query: 975 LAQLPPSCISRATVIAAKLE 994
LA LP I A I LE
Sbjct: 780 LAGLPDEVIQNAKKILNNLE 799
>gi|320035900|gb|EFW17840.1| DNA mismatch repair protein msh6 [Coccidioides posadasii str.
Silveira]
Length = 1204
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 266/954 (27%), Positives = 426/954 (44%), Gaps = 122/954 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P TL P S +++P E+Q E+K K+ D ++ + G + + D
Sbjct: 296 PGHPDYDPRTLYIPPLAWS------RFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 349
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA---AIKAHG 179
A + ++ + N +P L + V GFK+ V Q+E+A ++
Sbjct: 350 ATIGHQLFDLKLTDRVNMRMVGVPESSLEYWANQFVAKGFKIARVDQSESALGKEMRERD 409
Query: 180 PGKAGP--FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCV----VDDDGNVGK 231
K G R LS + T TL V G +D S Y V V VDD
Sbjct: 410 DKKKGDKVIKRELSCVLTAGTL-----VDGAMLQDDM---STYCVAVKEALVDDLPA--- 458
Query: 232 IRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LS 290
GV V+ +TG EF D + E ++ P ELLL + +S
Sbjct: 459 -------------FGVSFVDTATGQFFLTEFTDDVDMTKFETLVAQTRPQELLLEKGFMS 505
Query: 291 KQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE 350
+ ++L P + R+ + E+ + GE +S ++D PE
Sbjct: 506 PKALRILKNNTNPTTIWNYLKPEREFWDASTTRREL-----DAGEYFVSVDQDNIEAWPE 560
Query: 351 ---QGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMT 404
Q H+ +L + + I++L+ +ER ++ +G + + + +
Sbjct: 561 VLRQARHK----------ELVISSFGALIQYLRMLKIERDLITIGNFTWYDPIRKASSLV 610
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L TL LEV N+ +G + GTL ++N +T +G R+ ++WV HPL D I+ARLDA
Sbjct: 611 LDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRMFKQWVCHPLMDSKKINARLDA 670
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
V D N+D +I + QF SS LT + PD++R I+R+
Sbjct: 671 V-------------------DALNADSSIRD-QF----SSQLTKM---PDLERLISRVHA 703
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
T +F+ V++ + L G ++ LI +S P + G
Sbjct: 704 GTCKCQDFVRVLEGFEQIDYTMSLLKQTGS----------GDGVIGHLI--SSMPDMDGL 751
Query: 585 AAKLLSTVNK-EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+ ++ +A D G + + G + + + ++ + +LD L+ R++L
Sbjct: 752 LQYWKTAFDRVKAKDSG----IFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRRELNS 807
Query: 644 RNLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
+ + + +E+P + +P +W ++++TK+ RY+ PE+ + +L A E
Sbjct: 808 SAIIYRDNGKEIYQLEVPVKVRNIPKSWDQMSATKQAKRYYFPELRGLIRKLQEAQETHN 867
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPV 760
+ + F F Y + AAV+ A LDCL LA S + RPVFVD V
Sbjct: 868 QIVKEVTSRFYARFDENYQTWLAAVKITAQLDCLIGLAKASTAIGYPSCRPVFVDSDRSV 927
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
+ RHP + + D F+PND L ++TG N GKS +R IMAQ
Sbjct: 928 -LEFQELRHPCMLATVGD-FIPNDVKLGGNTASINLLTGANAAGKSTVLRMTCTAVIMAQ 985
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G +VP +SA L +D I +R+GA+D+I +STF EL+E IL T++SLVI+DEL
Sbjct: 986 IGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEATSRSLVILDEL 1045
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTS++DGVA+A A L ++ H + F THY +A +F G H S +
Sbjct: 1046 GRGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEG-----HPE--ISPR 1095
Query: 941 VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
M + D+ VT+LYK+ GV+E SFG A + +P I A V A + E
Sbjct: 1096 RMRIHVDEEDRRVTFLYKLEDGVAEGSFGMHCASMCGIPTQVIETAEVAAKEWE 1149
>gi|392574726|gb|EIW67861.1| hypothetical protein TREMEDRAFT_40008 [Tremella mesenterica DSM 1558]
Length = 959
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 273/945 (28%), Positives = 436/945 (46%), Gaps = 117/945 (12%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
+ +TP E+Q E+K + D +L + G F + DA++ + +P
Sbjct: 56 RGFTPFERQFWEIKQNHYDTVLFFQKGKFFELYEGDAQIGHDQFDLKLTKRVKMQMVGVP 115
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP----------FGRGLSALYTK 196
+ + + G+KVG V+Q ETA I A AG R L+ ++T
Sbjct: 116 EQSFDEFAAKFLAHGYKVGKVEQVETA-IGAELRRNAGKGSSTLKEDKIVQRELAQIFTN 174
Query: 197 ATLEAAEDVGGGEDGCGGESNYLVCV---VDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T + G ESN+ V V VD +G V V+G V ++ S
Sbjct: 175 GT------IVDGAYLSTHESNHCVAVKEQVDPNGTV------VYG--------VCVLDAS 214
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECA 312
TG+ D LR+ L + + P ELL + LS T ++L + P +
Sbjct: 215 TGEFQLTALEDDVLRTKLGTLFRQIRPKELLHAKGNLSSPTLRLLRNISPPNVLWQDFKD 274
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
+ + L E+ L+E G+ D +P +AI+ ++N P LA++AL
Sbjct: 275 GVEFYPVAKTLEELGKLFEVEGDLA-----DMKATLP------NAIKTMLNEP-LAIEAL 322
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSME---MTLSANTLQQLEVLRNNSNGSEYGTLL 429
+ +L+ L++ + +F + E + L +L +E+L NN G E GTLL
Sbjct: 323 GGMLFYLRSLNLDKDLVSQGNFTIFDPTREGKVLILDGQSLGHMEILINNEGGHE-GTLL 381
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
++ + +T G RL R W+T PLC+ I+ RLDAV +I
Sbjct: 382 SLLQNCVTPSGKRLFRMWITAPLCEVRAINDRLDAVDDIMH------------------- 422
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
P F + +S +L PD++R ++R + +F+ +++ L+ L
Sbjct: 423 -----HPDFAGMFTSSFKNL---PDLERLVSRAHAGSMRQKDFLTIIEGFQTVSSTLKTL 474
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
+S + ++ + L+ A + + + L V +E G ++++ +
Sbjct: 475 --------VSSSSSFSTSPVPDLLRGAPDLNPLLQHMRTLYHVVQE----GKTIDILP-T 521
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE---FMSVSGITHLIEL--PANF 664
G E +A V + L+ L RKQL + E + S G + +L A+
Sbjct: 522 QGSDRECDQADANVAEQEGILEQLREKARKQLHLARGEIAYWHSNQGGKEIYQLQVAADV 581
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
+VP +W K + TK RY++ E+ + +L E ++ + + L++F E+
Sbjct: 582 EVPSSWRKQSGTKTVSRYYNSEITPVIRKLQEEREMQSVAKKTFFRRLLQKFDQSRREWL 641
Query: 725 AAVQALAALDCLHALATLSRNKN--FVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVP 782
AV+ +A LDCL +LA S N + RPVF++ E I RHP + L +F+
Sbjct: 642 NAVKTVAELDCLVSLAKASSNMDEPKCRPVFINSPEAF-IDFTELRHPSM--CLRADFIA 698
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND L ++TGPNM GKS +R A IMAQ+G +VP++SA L +D I TRM
Sbjct: 699 NDVRLGKSEPRTVLLTGPNMAGKSTLLRMTASAVIMAQLGCYVPSASATLSPIDRIQTRM 758
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GA D++ ST+ EL+E S ILR +SLVI+DELGRGTSTHDG+AIA A L +L
Sbjct: 759 GAYDNMFASASTYKVELDECSKILREAGPKSLVILDELGRGTSTHDGMAIAMAVLHHLAT 818
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD---VTYLYKV 959
H + F THY +AD +F YH + H M + D+D V +LYK+
Sbjct: 819 HTLPLGFFATHYGLLAD---EF-----LYHPNIRNMH-----MQTHVDEDLLQVVFLYKL 865
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNR 1004
+PGV+ESS G VA +A +P S ++RA ++A+ + R+ R
Sbjct: 866 IPGVAESSHGTHVAHMAGVPTSVVTRAQKVSAEFFDDTKKRLATR 910
>gi|302391923|ref|YP_003827743.1| DNA mismatch repair protein MutS [Acetohalobium arabaticum DSM 5501]
gi|302204000|gb|ADL12678.1| DNA mismatch repair protein MutS [Acetohalobium arabaticum DSM 5501]
Length = 893
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 271/942 (28%), Positives = 447/942 (47%), Gaps = 154/942 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFM----- 141
K+ TP+ QQ +K +Y D +L+ +G + F +DAE+AA+ L + +
Sbjct: 3 KELTPMMQQYFSIKDEYDDAILLFRLGDFYEMFADDAELAARELELTLTSRNKGKGKKTP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A IP ++ L++ G++V + +Q E P + G R + + T T
Sbjct: 63 MAGIPYHSAESYIATLIDKGYRVAICEQVE-------DPSETNGLVKREVVRVITPGT-- 113
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
V E +NYL VV ++ +GF G+ ++ISTGD
Sbjct: 114 ----VIDNEMLDDKNNNYLSAVVANE------------EGF----GIATIDISTGDFSTT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN-VRVECASRDCFIG 319
E +S L L ++PAE L+ L ++TE ++ Y + + E R +
Sbjct: 154 ELTGEEAQSNLIDELARINPAECLVDTNLYEKTE--VITYINQQLDPIINEIKERFNYSQ 211
Query: 320 GGALA----EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
L EV SL + G + L + A+ + D ++ T
Sbjct: 212 AYDLLIDHFEVNSL-DGFGCEDL----------------KFAVTAAGAVLDFLIETQKRT 254
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
+ HL Q + S MTL ANT + LE+ + + S G+LL +++ T
Sbjct: 255 LGHLNQL------------TTYSTKDYMTLDANTRRNLELTKTIRDQSYKGSLLWVLDQT 302
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
+T G R L++W+ PL D I+ RLDAV E+ +++
Sbjct: 303 VTAMGGRKLQKWLEQPLLDVEGINNRLDAVGELKDNI----------------------- 339
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDG 553
++ + +L D++R +++I + +A + IA+ +I L A K+L
Sbjct: 340 ----FLKEELKDNLTEVYDLERLMSKITYGSANARDLIALKTSIANLPAIKELLT----- 390
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIIS 609
+ S L SA A + +L+ + KE +GD II
Sbjct: 391 ----QFESSKLKSA--------ADKLDTLEDVHELIESSIKEEPPTTVTEGD-----IIK 433
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK- 665
G E+ R+A+ K+ + +L +++ G+++L+ F V G + IE+ AN
Sbjct: 434 TGYDEELDEFRQAMNEGKDWIANLEKEEKERTGIKSLKVGFNKVHG--YYIEVTKANLDL 491
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE-FQ 724
VP N+ + + + RY +PE L + L EE ++ + ++E E Q
Sbjct: 492 VPDNYERKQTLSNSERYITPE-LKEKESKILGAEEKSVELEYQLFTEIREKVAQETERVQ 550
Query: 725 AAVQALAALDCLHALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTILLD-NFVP 782
+A LD L +LA ++ N N+ P V D I I GRHPV++ +L + +FVP
Sbjct: 551 KVADIVAQLDVLASLAEVAINNNYCHPEVNASD----VIDIEDGRHPVVEEMLEEESFVP 606
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND+ + +++ IITGPNM GKS Y+RQVAL+ +M+Q+GSF+PA A++ ++D I+TR+
Sbjct: 607 NDSYIDCDQDRFLIITGPNMSGKSTYMRQVALMVLMSQIGSFIPADEAKIGIVDRIFTRV 666
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD + G+STF+ E+NE + IL N T SLVI+DE+GRGTST+DG++IA+A +Y+ +
Sbjct: 667 GASDDLTTGQSTFMVEMNEVANILNNATQNSLVILDEVGRGTSTYDGLSIAWAVTEYISD 726
Query: 903 HKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
LF THY ++ ++++K G V Y+V+ + D+T+L K+V
Sbjct: 727 QSNIGAKSLFATHYHELTELESKLPG-VKNYNVAV-----------KEEGSDITFLRKIV 774
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
PG + S+G +VA+ A +P S I RA + KLE E+ + Q
Sbjct: 775 PGKANDSYGIEVAKRAGVPKSVIDRANEVLEKLETEIDNYEQ 816
>gi|302890002|ref|XP_003043886.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724804|gb|EEU38173.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1201
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 269/968 (27%), Positives = 440/968 (45%), Gaps = 130/968 (13%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+TP P+ T+ IP P++ KK++P E Q E+K D ++ + G + +
Sbjct: 295 RTPDNPEYDKRTIY-IP-PAAW----KKFSPFETQYWEIKQNLWDTIVFFKKGKFYELYE 348
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK---- 176
DA + + N +P L+ V + + +KV V Q ET K
Sbjct: 349 NDATVGHQEFDFKMTDRVNMRMVGVPESSLDYWVNQFIAKQYKVARVDQMETNLGKEMRE 408
Query: 177 ---AHGPGKAGPFGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGK 231
G R L+ + T TL V GG +D CV
Sbjct: 409 RQDKSGKKADKIITRELACVLTAGTL-----VDGGMLQDDMAS-----YCVA-------- 450
Query: 232 IRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLS 290
I+ V D G+ + +TG F D + E ++ P EL+L + LS
Sbjct: 451 IKESVVDDL--PAFGIAFADTATGRFYLSSFVDDVDLTKFETLIAQTGPRELVLEKSKLS 508
Query: 291 KQTEKMLLAYAGPAS---NVRVECASRDC-----FIGGGALAEVMSLYENMGEDTLSNNE 342
+ ++L P + +++ + D +G G +V + + + + L
Sbjct: 509 TKALRILKNNTSPTTIWTHLKPDTEFWDADTTRRELGCGKYFKVKDIDDEVWPEALQQFR 568
Query: 343 DQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRS---LSG 399
D ++ +M+ AV AL +R LK LER + +F +
Sbjct: 569 DDDI--------------VMS----AVGALVSYLRFLK---LERPLLSQGNFERYNPIQK 607
Query: 400 SMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLIS 459
+ + L TL LEV N+ NG GTL ++N +T +G RL R WV HPLC+ + I+
Sbjct: 608 NGTLVLDGQTLINLEVFSNSVNGGTEGTLFSLLNKCITPFGKRLFRSWVAHPLCNIDRIN 667
Query: 460 ARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGI 519
RLDAV + N+D + E + L + PD++R I
Sbjct: 668 ERLDAVEML-------------------NADQGVRE--------DFASQLVKMPDLERLI 700
Query: 520 TRIFHRTATPSEFIAVMQAILYAGKQLQ-QLHIDGEYREKVTSKTLHSALLKRLILTASS 578
+RI P +F+ V++ +Q++ + + G ++ + L+ RLI +S
Sbjct: 701 SRIHAGACKPEDFVKVLEGF----EQIEYTMSLLGAFKG-------GNGLVDRLI--SSM 747
Query: 579 PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCR 638
P + + S ++ A LL I G + + ++ K++LD L+ +
Sbjct: 748 PNLEEPLSFWRSAFDRRKARDDKLL---IPERGIEEDFDESADRIEEIKQQLDELLAEKK 804
Query: 639 KQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALAN 698
K+ + L + V + +E P + KVP NW ++++TK RY+ P++ + +L A
Sbjct: 805 KEFKCKLLNYRDVGKEIYQLEAPKSVKVPSNWRQMSATKDVKRYYFPQLSQLVRELQEAE 864
Query: 699 EELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDD 756
E + + R F K+F Y + A++ ++ LDCL +LA S + RP VD
Sbjct: 865 ETHSQLVRDVASRFFKKFDVDYETWLQAIKIISQLDCLVSLAKASASLGHPSCRPQLVD- 923
Query: 757 HEPVQIHICSGRHP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALI 815
E + RHP +++T+ D+F+PND L E+ ++TG N GKS +R +
Sbjct: 924 QERSTVDFQELRHPCMMNTV--DDFIPNDIKLGGEQANINLLTGANAAGKSTVLRMSCIA 981
Query: 816 GIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLV 875
IMAQ+G FVPA+SA L +D I +R+GA+D+I +STF EL+E IL T +SLV
Sbjct: 982 VIMAQIGCFVPATSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLV 1041
Query: 876 IVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSY 935
I+DELGRGTS++DGVA+A A L ++ H C+ F THY +A T+F
Sbjct: 1042 ILDELGRGTSSYDGVAVAQAVLHHVATHIGCVGFFATHYHSLA---TEFENH------PE 1092
Query: 936 LTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
+ + ++ +D + ++ VT+LYK+ GV+E SFG A + + I RA V A E
Sbjct: 1093 IRARRMQIHVDDE-ERRVTFLYKLEDGVAEGSFGMHCAAMCGISSRVIDRAEVAAK--EW 1149
Query: 996 EVSSRVQN 1003
E +SR+++
Sbjct: 1150 EHTSRLKD 1157
>gi|327296443|ref|XP_003232916.1| DNA mismatch repair protein msh6 [Trichophyton rubrum CBS 118892]
gi|326465227|gb|EGD90680.1| DNA mismatch repair protein msh6 [Trichophyton rubrum CBS 118892]
Length = 1217
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 268/965 (27%), Positives = 444/965 (46%), Gaps = 117/965 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL IP P + T K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 300 PDYDPRTLY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 353
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------AIKA 177
++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 354 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKG 413
Query: 178 HGPGKAGP----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
+ GKA R L+ + T TL + G S Y CV I+
Sbjct: 414 NKMGKAQKEDKVIKRELACVLTTGTLVEGSMIQGDM------STY--CVA--------IK 457
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
+ DG G+ V+ +TG +F D + E + P ELLL + +S +
Sbjct: 458 EAII-DGLPA-FGISFVDTATGQFFLSQFVDDVDMTRFETFVAQTRPQELLLEKSVMSTK 515
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
++L GP + ++ G +E + T+ + V E
Sbjct: 516 ALRILKNNTGPTTLWN--------YLKPGK-----EFWE--ADVTVRELDAGGYFVSEDK 560
Query: 353 NHRSAI-EGIMNMPD--LAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLS 406
NH SA + + + D L + A +++L+ + R ++ +G + + + + L
Sbjct: 561 NHASAWPQALQDSRDKELVMSAFGALLQYLEMLKIGRDLITIGNFTWYDPIKKASSLVLD 620
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TL LEV N +GS GTL ++N +T +G RL ++WV HPL D I+ARLDAV
Sbjct: 621 GQTLINLEVFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLDAVE 680
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
+ N+D T+ E QF SS LT + PD++R I+R+ T
Sbjct: 681 SL-------------------NADSTVRE-QF----SSQLTKM---PDLERLISRVHAGT 713
Query: 527 ATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
+F+ V++ +Q++ + G +E + L L+ ++ P + G
Sbjct: 714 CKAQDFVRVLEGF----EQIE--YTMGLLKEAGSGHGLIGQLI------SAMPDLNGLLK 761
Query: 587 KLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
+ ++ A + D+L + E ++K ++ ++EL+ ++ RK+L +
Sbjct: 762 FWETAFDRAKARECDIL---VPEESVEEEFDASKKNIEQLEDELEQVLQRTRKELKCSTI 818
Query: 647 EFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
F + +E+P K +P +W ++++TK+ RY+ PE+ + +L A E V
Sbjct: 819 VFKDNGKEIYQLEVPIKIKNIPKSWDQMSATKQVKRYYFPELRALIRKLQEARETHAQVV 878
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIH 763
+ F F Y+ + A+++ +A LDCL LA S RP+FVDD V +
Sbjct: 879 KGVAGRFYARFDKDYSSWLASIKIIAQLDCLIGLAKASTALGHPSCRPIFVDDERSV-LD 937
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
RHP + + D F+PND L + ++TG N GKS +R IMAQ+G
Sbjct: 938 FQELRHPCMMPNVGD-FIPNDVKLGGDTSNINLLTGANAAGKSTVLRMTCTAVIMAQIGC 996
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
+VP A L +D I +R+GA+D+I +STF EL+E IL T++SLVI+DELGRG
Sbjct: 997 YVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATSRSLVILDELGRG 1056
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
TS++DGVA+A A L ++ H + F THY +A +F G + + ++
Sbjct: 1057 TSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEGH------PEIAARRMRI 1107
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+D +++ VT+LYK+ GV+E SFG A + +P + A V A + E +SR++
Sbjct: 1108 HVDD-AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEVAAKQWEH--TSRMKE 1164
Query: 1004 RSAKR 1008
KR
Sbjct: 1165 SLEKR 1169
>gi|319411719|emb|CBQ73763.1| related to MSH6-DNA mismatch repair protein (N-terminal fragment)
[Sporisorium reilianum SRZ2]
Length = 1279
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 273/944 (28%), Positives = 430/944 (45%), Gaps = 107/944 (11%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K +TP E+Q E+K + D +L + G + + EDA + + + +P
Sbjct: 377 KDFTPFEKQFWEIKQNHWDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVP 436
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFG------RGLSALYTKATLE 200
++ + + G+KVG V QTETA K G+ G R L + T T+
Sbjct: 437 EASFDIFAAKFLALGYKVGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIV 496
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
A + + N + + G RNG GV ++ +T +
Sbjct: 497 DAASLPD-------DLNSYCVSIKEAATPG--RNGPI-------FGVCTLDAATAEFNLT 540
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
EF D R+ LE +L SL E+L + LS T ++L + + + +
Sbjct: 541 EFEDDESRTRLETLLRSLRLKEVLHEKGGLSAPTLRVLRSTVPSTAQTTMLKPGVEFLEP 600
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL--AVQALALTIR 377
L ++ +L+ N D + E + P EGI +M D A+ AL +
Sbjct: 601 ETTLRKLNALF-NPNVDAEARLESLDPVDPSL-----LPEGIASMVDRPGAMSALGGMLC 654
Query: 378 HLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
+L Q L+R +C +F L + L A +L L VL+N+ G++ GTL ++N
Sbjct: 655 YLAQLNLDRDLCSSRNFNIFDPLRQDKCLVLDAQSLTHLNVLQND-EGTDEGTLHRLLNR 713
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
+T G RL + W+ PL + I AR DAV ++ +
Sbjct: 714 CVTPSGKRLFKIWLVAPLATADAIRARQDAVEDL------------------------LK 749
Query: 495 EPQFYYILSSVLTSLGRS-PDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
P F + G++ PDI+R + R+ P +F AV++++ K ++QL
Sbjct: 750 NPCF----GDEFETFGKALPDIERIVPRVRAGKCRPRDFTAVLKSLARFEKAVKQL---- 801
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ ++ + ++ L+ S PAV A +L S+ + + G + G F
Sbjct: 802 ----RSQCQSFETEVIDALL--QSIPAVSTMARELQSSF--KVTEDGSFHPI----EGAF 849
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL-------IELPANFKV 666
RA A+ + +L+ I RKQL + S HL +E+P KV
Sbjct: 850 EPYDRAETAIAEVEAQLEHEIETYRKQLKLT----ASKCAWKHLGTKDIFQVEVPVATKV 905
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P NW K++ TK R++SP+V + + A E + S F F A
Sbjct: 906 PSNWTKLSGTKDRNRWYSPKVRDLVQDIKEARETRLAALKQFHQSLFASFSEQSDVFLQA 965
Query: 727 VQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
V+ +A +DCL +LA S + RP VD HE + RHP + +D F+PND
Sbjct: 966 VKTVAEIDCLLSLAKASYAIGEPSCRPELVD-HETALLEFEELRHPCIAGDNVD-FIPND 1023
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
L E + I+TG NM GKS R A I+AQ+G VPAS A L +D + +RMGA
Sbjct: 1024 IRLGGENDEVVILTGGNMAGKSTTARTSATAVILAQLGCRVPASRARLSPVDRVASRMGA 1083
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D I + STF+ E+ E S I+ CT +SLVI+DELGRGTST DG AIA+A L +L+
Sbjct: 1084 NDQIFRNNSTFMVEMLETSRIINECTPRSLVIMDELGRGTSTFDGQAIAFAVLHHLVSRT 1143
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
+C+ F+THY +A ++ V H+ L D+K ++V + Y++V G++
Sbjct: 1144 RCLTFFLTHYTNLAYDFDSYS-RVSNKHMQVLVD-------DAK--REVIFTYRLVDGIA 1193
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQ-NRSA 1006
ESS+G +VA LA +P RA V++ + EA +S+ + N+SA
Sbjct: 1194 ESSYGTQVAALAGVPLEICDRAAVVSKQFAEATKASQAEKNKSA 1237
>gi|303321249|ref|XP_003070619.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240110315|gb|EER28474.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 1221
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 266/954 (27%), Positives = 426/954 (44%), Gaps = 122/954 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P TL P S +++P E+Q E+K K+ D ++ + G + + D
Sbjct: 313 PGHPDYDPRTLYIPPLAWS------RFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 366
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA---AIKAHG 179
A + ++ + N +P L + V GFK+ V Q+E+A ++
Sbjct: 367 ATIGHQLFDLKLTDRVNMRMVGVPESSLEYWANQFVAKGFKIARVDQSESALGKEMRERD 426
Query: 180 PGKAGP--FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCV----VDDDGNVGK 231
K G R LS + T TL V G +D S Y V V VDD
Sbjct: 427 DKKKGDKVIKRELSCVLTAGTL-----VDGAMLQDDM---STYCVAVKEALVDD------ 472
Query: 232 IRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LS 290
FG F V+ +TG EF D + E ++ P ELLL + +S
Sbjct: 473 --LPAFGVSF--------VDTATGQFFLTEFTDDVDMTKFETLVAQTRPQELLLEKGFMS 522
Query: 291 KQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE 350
+ ++L P + R+ + E+ + E +S ++D PE
Sbjct: 523 PKALRILKNNTNPTTIWNYLKPEREFWDASTTRREL-----DASEYFVSVDQDNIEAWPE 577
Query: 351 ---QGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMT 404
Q H+ +L + + I++L+ +ER ++ +G + + + +
Sbjct: 578 VLRQARHK----------ELVISSFGALIQYLRMLKIERDLITIGNFTWYDPIRKASSLV 627
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L TL LEV N+ +G + GTL ++N +T +G R+ ++WV HPL D I+ARLDA
Sbjct: 628 LDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRMFKQWVCHPLMDSKKINARLDA 687
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
V D N+D +I + QF SS LT + PD++R I+R+
Sbjct: 688 V-------------------DALNADSSIRD-QF----SSQLTKM---PDLERLISRVHA 720
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
T +F+ V++ + L G ++ LI +S P + G
Sbjct: 721 GTCKCQDFVRVLEGFEQIDYTMSLLKQTGS----------GDGVIGHLI--SSMPDMDGL 768
Query: 585 AAKLLSTVNK-EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+ ++ +A D G + + G + + + ++ + +LD L+ R++L
Sbjct: 769 LQYWKTAFDRVKAKDSG----IFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRRELNS 824
Query: 644 RNLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
+ + + +E+P + +P +W ++++TK+ RY+ PE+ + +L A E
Sbjct: 825 SAIIYRDNGKEIYQLEVPVKVRNIPKSWDQMSATKQAKRYYFPELRGLIRKLQEAQETHN 884
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPV 760
+ + F F Y + AAV+ A LDCL LA S + RPVFVD V
Sbjct: 885 QIVKEVTSRFYARFDENYQTWLAAVKITAQLDCLIGLAKASTAIGYPSCRPVFVDSDRSV 944
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
+ RHP + + D F+PND L ++TG N GKS +R IMAQ
Sbjct: 945 -LEFQELRHPCMLATVGD-FIPNDVKLGGNTASINLLTGANAAGKSTVLRMTCTAAIMAQ 1002
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G +VP +SA L +D I +R+GA+D+I +STF EL+E IL T++SLVI+DEL
Sbjct: 1003 IGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEATSRSLVILDEL 1062
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTS++DGVA+A A L ++ H + F THY +A +F G H S +
Sbjct: 1063 GRGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEG-----HPE--ISPR 1112
Query: 941 VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
M + D+ VT+LYK+ GV+E SFG A + +P I A V A + E
Sbjct: 1113 RMRIHVDEEDRRVTFLYKLEDGVAEGSFGMHCASMCGIPTKVIETAEVAAKEWE 1166
>gi|150390307|ref|YP_001320356.1| DNA mismatch repair protein MutS [Alkaliphilus metalliredigens
QYMF]
gi|172052479|sp|A6TR79.1|MUTS_ALKMQ RecName: Full=DNA mismatch repair protein MutS
gi|149950169|gb|ABR48697.1| DNA mismatch repair protein MutS [Alkaliphilus metalliredigens
QYMF]
Length = 880
Score = 306 bits (784), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 268/920 (29%), Positives = 432/920 (46%), Gaps = 132/920 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ QQ ++K +YPD LL +G + F +DAE A++ L G L+
Sbjct: 5 TPMMQQYFDIKKQYPDSLLFFRMGDFYELFFQDAETASRELEITLTGRSCGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ RLV+ G+KV + +Q E + +A G K R + + T TL +
Sbjct: 65 VPHHAATGYIDRLVSNGYKVAICEQIEDVS-QAKGIVK-----RDVVRVITPGTLIDTQL 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGD--GFDVRLGVVAVEISTGDVVYGEF 262
+ ++ NYL+ V FG GF G+ V+ISTGD+ E
Sbjct: 119 LDDKKN------NYLMSV--------------FGSRTGF----GLAYVDISTGDLFATEI 154
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+ L + + P ELL K+ ++ S ++ R F G
Sbjct: 155 KENIHPQMLIDEMGRVLPQELLYFIETDKEDPTII-------SMIK----KRFDFYTNG- 202
Query: 323 LAEVMSLYENMG-EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD-LAVQALALTIRHLK 380
YE EDT + N+ + + N S +EG+ P L + A +LK
Sbjct: 203 -------YEEWSYEDTFALNQ-----IKDHFNVVS-LEGLGFHPSHLGINAAGALFHYLK 249
Query: 381 ---QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+ LE I + S +MTL NT + LE+ + S+ G+LL +++ T T
Sbjct: 250 TTQKRALEHINHINV----YSIHEKMTLDINTRKNLELTETIRSKSKKGSLLGVLDKTST 305
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G R+LR+W+ PL D +I+ RL+AV + E +
Sbjct: 306 AMGGRMLRKWIEAPLIDPVIINKRLEAVQLLKEQIE------------------------ 341
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+ + SL + D++R +I + + TP + IA+ ++ Y + L E
Sbjct: 342 ---LRQELKESLKKIYDLERLAGKISYGSVTPRDLIALKNSLSYLPSIINGL-------E 391
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
K+ +T S + L V +L + D G II G EV
Sbjct: 392 KIQGETFQSLVQSIDPLDEVHSLV---ELSILEDAPLSSKDGG------IIQEGYHKEVD 442
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNS 675
+ A ++ + L R G+++L+ + IE+ +N VP + + +
Sbjct: 443 ELKNASTEGRQWIAQLEQKERVNSGIKSLKIKYNKIFGYYIEITKSNLSMVPTEYIRKQT 502
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY +PE+ ++ A E++ ++ + ++ Q +A+A LD
Sbjct: 503 LANCERYVTPELKEIESKILGAEEKVILLEYHLFIEVREKIAHEITRIQQTARAIAELDV 562
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD-TILLDNFVPNDTNLHAEREYC 794
L++ A ++ NF++P +E I I GRHPV++ T ++FVPNDT +
Sbjct: 563 LYSFAEIAAENNFIKPHINTSNE---IKIVEGRHPVVELTFNKESFVPNDTYMDNRDCSM 619
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS Y+RQVALI +MAQ+GSFVPAS A + ++D I+TR+GASD + QG ST
Sbjct: 620 SIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASEASIGIVDRIFTRIGASDDLAQGHST 679
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E++E + IL N TA SLVI+DE+GRGTST DG++IA+A ++Y+ ++KK LF THY
Sbjct: 680 FMVEMSEMANILNNATANSLVILDEIGRGTSTFDGLSIAWAVIEYMQQYKKSKTLFSTHY 739
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ +++ K G V Y++ + + +++ +L KVV G + S+G +VA+
Sbjct: 740 HELTELEGKIQG-VKNYNI-----------LVEEDGEEIVFLRKVVSGSTSKSYGIQVAK 787
Query: 975 LAQLPPSCISRATVIAAKLE 994
LA LP + + RA I + LE
Sbjct: 788 LAGLPLNTLIRAQEILSDLE 807
>gi|410657244|ref|YP_006909615.1| DNA mismatch repair protein MutS [Dehalobacter sp. DCA]
gi|410660280|ref|YP_006912651.1| DNA mismatch repair protein MutS [Dehalobacter sp. CF]
gi|409019599|gb|AFV01630.1| DNA mismatch repair protein MutS [Dehalobacter sp. DCA]
gi|409022636|gb|AFV04666.1| DNA mismatch repair protein MutS [Dehalobacter sp. CF]
Length = 850
Score = 306 bits (783), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 272/936 (29%), Positives = 431/936 (46%), Gaps = 171/936 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ ++K + PD +L +G + FG+DAE AA VL I A
Sbjct: 3 TPMLQQYQKIKNRVPDTILFFRLGDFYEMFGQDAETAAPVLEIVLTARDAGKGQKIPMCG 62
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ ++ +LV AGFKV + +Q E G R + + T TL
Sbjct: 63 VPHHAVDGYLLKLVAAGFKVAICEQMEDPQ------ASKGIVKRDIVRIVTPGTL----- 111
Query: 205 VGGGEDGCGGES--NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
D E+ NYL CV + + ++I+TGD E
Sbjct: 112 -----DNISSETKNNYLACVYKEKT-----------------WALAYLDITTGDFRIMET 149
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+ L+A L ++P+EL+L + ++ K+ Y + ++ F+
Sbjct: 150 PSIQI---LQAELNRIAPSELILPKDIA-MLSKLFTDY-------YLTAIEKNLFLRTAE 198
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ- 381
L E + E + MP +A +A A +++ Q
Sbjct: 199 LRE---------------------------RFKEQAELLQQMP-VACKAAAGLWQYISQN 230
Query: 382 ---FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
G E I+ + S S M L T + LE++ + E GTL +N T T
Sbjct: 231 IPNSGQEHILRISVS----QSSTAMVLDKWTRRNLELVESLRTSDEKGTLFSTLNLTKTA 286
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
+G+RLLR WV PL D I+ RL +V E+ +
Sbjct: 287 FGARLLRNWVQQPLRDPESINERLASVEELTRNT-------------------------- 320
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
++ + +L D++R + ++ A+P + +A+ G L L + R+
Sbjct: 321 -FLRQDIQKALTTVYDLERLLGKLSLGKASPRDLLAL-------GSTLSCL---PKVRDC 369
Query: 559 VTSKTLHSALLKRLILTASSPAVIGK---AAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+T L K L P++ G A +LL+ +N EA N II NG +E
Sbjct: 370 ITDND-SQKLAKYL------PSLAGLDDLAQELLAAINPEAPYSPKDGN--IIQNGYSAE 420
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKV 673
+ R KE + L N R++ +R+L+ + IE+ AN +P ++ +
Sbjct: 421 IDSLRAISSGGKEWIARLENQERERTKIRSLKIGFNKNFGYFIEITNANAHLIPDDYQRK 480
Query: 674 NSTKKTIRYHSPE-------VLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
+ R+ +PE VLTA D+L+ +L V R D L A
Sbjct: 481 QTLVNAERFITPELKEYEQRVLTAQDKLSDLEYQLFSVLR---DKVL----ACSLLIINA 533
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
Q+LA +D +LA + N+V+P D IHI GRHPV++ I D FVPNDT
Sbjct: 534 AQSLAEIDVFVSLAGTAIQNNYVKPEIRSDG---IIHIVEGRHPVVERIC-DTFVPNDTY 589
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L ++ +ITGPNM GKS Y+RQVALI +MAQ+GSFVPA A + + D I+TR+GA+D
Sbjct: 590 L-TRNKHLALITGPNMAGKSTYMRQVALIVLMAQIGSFVPAQKAAISIADCIFTRVGAAD 648
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-- 904
++ G+STF+ E+NE ++IL+N TA SL+I+DE+GRGT+T DG+++A+A +YL+E+
Sbjct: 649 NLAAGQSTFMVEMNEVAHILKNATADSLIILDEVGRGTATFDGLSLAWAIAEYLVENTNI 708
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
K LF THY ++ +++ ++ V HV+ + DV +L+K++PG +
Sbjct: 709 KAKTLFATHYHELTELEERYP-EVFNLHVAV-----------REQGDDVVFLHKILPGKA 756
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ S+G VA++A LPP + RA +I +LE + R
Sbjct: 757 DRSYGLHVAKIAGLPPHLLKRAAIILGELENSPTQR 792
>gi|226291537|gb|EEH46965.1| DNA mismatch repair protein msh6 [Paracoccidioides brasiliensis Pb18]
Length = 1207
Score = 306 bits (783), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 271/974 (27%), Positives = 438/974 (44%), Gaps = 131/974 (13%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P T+ IP P + T K++P E+Q E+K K+ D ++ + G + + D
Sbjct: 290 PGHPDYDPRTIY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 343
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA--HGP 180
A + ++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 344 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREKQ 403
Query: 181 GKAGP--------FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVG 230
GK G R L+ + T TL V GG +D S Y CV + V
Sbjct: 404 GKTGGSVGKQEKIIRRELACVLTSGTL-----VDGGMLQDDM---STY--CVAIKEALVN 453
Query: 231 KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PL 289
+ VFG F V+ +TG EF D + E + P ELLL + +
Sbjct: 454 DL--PVFGIAF--------VDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELLLEKSAM 503
Query: 290 SKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVP 349
S + ++L N + + G E + T+ + N V
Sbjct: 504 STKALRIL-------KNNTIPTTLWNYLKPGKEFWE--------ADITVRELDASNYFVS 548
Query: 350 EQGNHRSAIEGIMNM---PDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEM 403
G++ A ++ + A+ A +++L+ +ER ++ +G + + + +
Sbjct: 549 PDGDNLLAWPQVLREARDKEFAMSAFGALVQYLRMLKIERDLITIGNFTWYDPIRKATSL 608
Query: 404 TLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLD 463
L TL LEV N+ +G + GTL ++N +T +G R+ ++WV HPL D I+ARLD
Sbjct: 609 VLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQWVCHPLVDTKKINARLD 668
Query: 464 AVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIF 523
AV D N+D + QF SS LT + PD++R I+R+
Sbjct: 669 AV-------------------DALNAD-NAIRNQF----SSQLTKM---PDLERLISRVH 701
Query: 524 HRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIG 583
+ +F+ V++ + L G E V + L +S P + G
Sbjct: 702 AGSCKAQDFLRVLEGFEQIDYTMGLLKETGS-GEGVIGQ-----------LVSSMPDLSG 749
Query: 584 KAAKLLSTVNK-EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
+ ++ +A D G +++ G + + + + ELD L+ RKQLG
Sbjct: 750 HLKYWKTAFDRSKAKDSG----ILVPEAGVEEDFDVSHDKITEIEYELDQLLKRVRKQLG 805
Query: 643 MRNLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
+ + + +E+P K VP +W ++++TK+ R++ PE+ + + QL A E
Sbjct: 806 STAIVYRDNGKEIYQLEVPIKIKSVPKSWDQMSATKQAKRFYFPELRSLIRQLQEAQETH 865
Query: 702 TIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEP 759
+ + + F F Y+ + AAV+ +A LDCL +LA + + RPVFVD+
Sbjct: 866 SQIVKEVAGRFYARFDENYSTWLAAVKVVAQLDCLISLAKATSALGYPSCRPVFVDEERS 925
Query: 760 VQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMA 819
+ + RHP + + D F+PND L E ++TG N GKS +R IMA
Sbjct: 926 I-LEFQELRHPCMLPNVGD-FIPNDVKLGGEAPNINLLTGANAAGKSTILRMTCTAVIMA 983
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q+G VP SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DE
Sbjct: 984 QIGCHVPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDE 1043
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
LGRGTS++DGVA+A A L ++ H + F THY +A +F G H
Sbjct: 1044 LGRGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEG------------H 1088
Query: 940 KVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ P + ++ VT+LYK+ GV+E SFG A + +P + RA + A + E
Sbjct: 1089 PEIAPRRMRIHVDEEERRVTFLYKLEEGVAEGSFGMHCASMCGIPNKVVERAEIAAKQWE 1148
Query: 995 AEVSSRVQNRSAKR 1008
+SR++ +R
Sbjct: 1149 H--TSRLKESLERR 1160
>gi|395324921|gb|EJF57352.1| DNA mismatch repair protein Msh6 [Dichomitus squalens LYAD-421 SS1]
Length = 1291
Score = 306 bits (783), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 268/973 (27%), Positives = 424/973 (43%), Gaps = 108/973 (11%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P +P P TL IP ++ N+ +TP E+Q E+K + D +L + G + ED
Sbjct: 344 PGEPGYDPRTLY-IP----KSAWNE-FTPFEKQFWEIKQNHFDTILFFQKGKFLELYEED 397
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------- 173
A + + + +P N + + G+KVG V Q ETA
Sbjct: 398 ARIGHQEFDLKLTQRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVDQAETALGAEMRLAA 457
Query: 174 AIKAHGP-----GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN 228
K+ P GK R L+ ++T TL AE + + G + V + +++
Sbjct: 458 DKKSKKPPAADKGKDKIVRRELNKVFTNGTLVDAELLTDDQAG------HCVSIREEEDA 511
Query: 229 VGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ- 287
K FG + ++ +T + F D R+ LE ++ L P E++ +
Sbjct: 512 ESKDGKQTFG--------ICVLDSATSEFNLSAFEDDICRTKLETMMRQLRPKEIIFTKG 563
Query: 288 PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD 347
LS T ++L + P + + + + E+ LY G+D +D+ D
Sbjct: 564 NLSVSTTRLLKSIL-PGNCLWTSLRDVEGLKFQDTIKELKKLYPASGDD-----DDEMAD 617
Query: 348 VPEQGNHRSAIEGIMNM--PDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSME 402
P G + E I M A++AL I +L +++ + +F +
Sbjct: 618 NP-HGLSSAVPEPIRRMLPHRAAIEALGSMIWYLNTLNIDKDILSMKNFNIYDPMRRGQG 676
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
+ L TL +EVL+N S G+E GTLL +++ +T G RL R W+ PL + I+ARL
Sbjct: 677 LVLDGQTLAHIEVLQN-SEGTEEGTLLKLLSRCITPSGKRLFRIWLCMPLREVKDINARL 735
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV ++ + P F +S+ L PD++R ++RI
Sbjct: 736 DAVQDLLD------------------------HPTFEAQFASIAKGL---PDLERIVSRI 768
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
+ +F+ V+ A K L +L T+ S + L+ TA A
Sbjct: 769 HAKNCKVKDFLKVLTAFKNLSKGLAELAD--------TADAFESKTISGLLRTAPDLAPN 820
Query: 583 GKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
K K + +E +D+ ++ +G + ++EL + + RK+ G
Sbjct: 821 LKHVKSMFQTPEENSDE------LVPEDGMDEVYDTVMSEINELEDELKAELKTIRKKTG 874
Query: 643 MRNLEFMSVSGIT--HLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALAN 698
+ + S G +L++L K P W STK R+ P + T + +L A
Sbjct: 875 LDATYWHSAQGTKEIYLVQLQGKEKDKAPKEWTLSGSTKNAKRFIIPSLQTTIRKLKEAR 934
Query: 699 EELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDD 756
E + + EF + + A++ L+ LDCL +LA S + RP V+
Sbjct: 935 ENRNTAIKDFKNRLFAEFDADRSVWLRAIRVLSELDCLFSLAKASSALGEPACRPELVEG 994
Query: 757 HEPVQIHICSGRHPVL--DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
E I RHP L + L +F+PND L + ++TGPNMGGKS +R A
Sbjct: 995 DEAF-IDFTELRHPALVAGSSLRGDFIPNDVKLGGDVGRIALLTGPNMGGKSTAMRMTAT 1053
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
IMAQ+G VPA A L +D I TRMGA D++ STF EL+E ILR+ T +S
Sbjct: 1054 GIIMAQLGMLVPAKRARLCPVDSILTRMGAYDNMFSNASTFKVELDECCKILRDATPKSF 1113
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVS 934
VI+DELGRGTST+DG+AIA A L L H + F THY + D YH +
Sbjct: 1114 VILDELGRGTSTYDGMAIAGAVLHQLATHTLSLSFFATHYGSLTDDY--------AYHPN 1165
Query: 935 YLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
H M + +++ +LYK+V G + SSFG VA LA +P + RA V++
Sbjct: 1166 VRNMH--METLVDDEKRELVFLYKLVDGAAGSSFGTHVANLAGVPLEVVERAEVVSKDFA 1223
Query: 995 AEVSSRVQNRSAK 1007
+++ + K
Sbjct: 1224 KHFKEKLEGKKTK 1236
>gi|242077718|ref|XP_002448795.1| hypothetical protein SORBIDRAFT_06g033320 [Sorghum bicolor]
gi|241939978|gb|EES13123.1| hypothetical protein SORBIDRAFT_06g033320 [Sorghum bicolor]
Length = 280
Score = 306 bits (783), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 159/288 (55%), Positives = 202/288 (70%), Gaps = 16/288 (5%)
Query: 802 MGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNE 861
MGGKSCYIRQVALI +MAQVGSFVPASSA LHV+DGIYTRMGASDSIQQG STF EE+NE
Sbjct: 1 MGGKSCYIRQVALITMMAQVGSFVPASSAMLHVVDGIYTRMGASDSIQQGTSTFHEEMNE 60
Query: 862 ASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIK 921
AS ILRNC+A+SLVI+DELGRGTSTHDGVAIAYATL YLL+ KKC+V+FVTHYPKI DI+
Sbjct: 61 ASNILRNCSARSLVIIDELGRGTSTHDGVAIAYATLHYLLKEKKCIVIFVTHYPKILDIQ 120
Query: 922 TKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ--------DVTYLYKVVPGVSESSFGFKVA 973
+F GSVG YHVSYL + K++ D + ++ +LYK+V G S+ SFG VA
Sbjct: 121 REFEGSVGAYHVSYLATMKLLEVTDKPVETSPEANNLGEIIFLYKLVAGASDRSFGLNVA 180
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFY 1033
LAQLP CI RA+V+AAKL+ E+S+R +N+ +R D E+ + + Y
Sbjct: 181 LLAQLPSRCIKRASVMAAKLQEELSAREENK-LRRTTDAPTVDGPSESSAEVGLLCSQPY 239
Query: 1034 LGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELI 1081
+ L R + LN+ A +++ + LK+A+ IA+++I
Sbjct: 240 -------QQLAETCRKILLNITLAQSNNDVVDTLPSLKNAQEIARKMI 280
>gi|325295187|ref|YP_004281701.1| DNA mismatch repair protein mutS [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065635|gb|ADY73642.1| DNA mismatch repair protein mutS [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 842
Score = 306 bits (783), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 254/948 (26%), Positives = 436/948 (45%), Gaps = 166/948 (17%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS- 144
KK TP +Q +ELK KY D +LM +G + F EDAE+AAK L I A F +S
Sbjct: 2 KKKLTPALKQYLELKEKYKDSILMFRMGDFYEMFFEDAEIAAKELEI-ALTSRAFGKSSE 60
Query: 145 ------IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
+P + ++ +LV G+KV + +Q E PGK RG+ + T T
Sbjct: 61 KAPMCGVPHHAVESYIGKLVRKGYKVAICEQLEEPK-----PGKK-VVDRGVVRVITPGT 114
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E+ E +L+ + + N + E+STGD+
Sbjct: 115 YFEDEN----------EDRFLLSIYPNKNN----------------FSIAWTELSTGDLY 148
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ N R L+++L P E+++ + F
Sbjct: 149 FATVN----REDLKSILSKFKPKEIIVPE----------------------------GFS 176
Query: 319 GGGALAEVM--SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
G + EV+ +L + + E + +V E + + A+ G++ + I
Sbjct: 177 GYKVIKEVLPETLIQEKEKGYFEVKETNSPEV-ESKSEKRALSGLLEFIEETQLDFTPKI 235
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
+ K++ +G + L T + LE++ + E +L ++N T
Sbjct: 236 KPPKRY---------------TGEKYIYLDPQTQKNLELIEPIAGKLESASLFGVLNKTK 280
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G RLL+ W+ HPL D+ I RLDAV E+ +S
Sbjct: 281 TGMGRRLLKFWILHPLKDKKEIEERLDAVEELKDS------------------------- 315
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
+++ +L L + DI+R +++I A+P + +A + L L++L D
Sbjct: 316 --FFVADEILELLSKVYDIERLLSKITSGIASPRD-LASFRNSLGVLPDLKKLLAD---- 368
Query: 557 EKVTSKTLHSALLKRLILTASS-PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
S+LL ++ + + ++L + +G L I G E
Sbjct: 369 -------FKSSLLSQIYKNFDDLYDIYCELERVLVENPPFTSREGGL-----IKEGVNPE 416
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPLNWA 671
+ R+ ++ L + RK+ G+ +L+ F +V G + IE+ AN VP N+
Sbjct: 417 LDELRRIKNEGEKILKEIEERERKRTGISSLKIGFNNVFG--YYIEVSKANLHLVPENYI 474
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + R+ +PE+ +++ A E + + + K + +A
Sbjct: 475 RRQTLVNAERFITPELKEFEEKILSAQERIEKIEYQLFVELRKFVSKNADRISKTAEKIA 534
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAER 791
+D L + + ++ + + +P + + I I +G+HPVL+ L ++F+PNDT L E+
Sbjct: 535 TIDVLLSFSKIANERGYTKPRVTEGY---SIKIKNGKHPVLEKFLEEDFIPNDTEL-TEK 590
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
E+ I+TGPNMGGKS ++RQ ALI IMAQ+GSFVPA AE+ ++D I++R+GA+D++ +G
Sbjct: 591 EFILIVTGPNMGGKSVFLRQTALITIMAQIGSFVPAEEAEIGIVDRIFSRVGAADNLSKG 650
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFV 911
STF+ E+ E + IL+N +SL+I+DE+GRGTST+DG++IA A ++Y+ LF
Sbjct: 651 LSTFMMEMVETANILQNAGKRSLIILDEIGRGTSTYDGMSIAKAVVEYISGKVGAKTLFA 710
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ K G V +HV+ + D+ + + +KV+PG SE S+G
Sbjct: 711 THYHELTELEGKVKG-VKNFHVTV-----------EEIDEKIVFTHKVLPGASEKSYGIH 758
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQ 1019
VA+LA LP I RA I +LE R K L++L+++++
Sbjct: 759 VAELAGLPKEVIDRAKEILYQLE---------RGGKELPLLRLAEEKE 797
>gi|67522503|ref|XP_659312.1| hypothetical protein AN1708.2 [Aspergillus nidulans FGSC A4]
gi|40745672|gb|EAA64828.1| hypothetical protein AN1708.2 [Aspergillus nidulans FGSC A4]
gi|259487049|tpe|CBF85409.1| TPA: protein required for mismatch repair in mitosis and meiosis
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1186
Score = 305 bits (782), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 257/953 (26%), Positives = 436/953 (45%), Gaps = 123/953 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P+ P TL P S K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 274 PEYDPRTLYIPPLAWS------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 327
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP 185
++ + N +P L+ + V GFK+ V Q+E+A
Sbjct: 328 GHQLFDLKLTDRVNMRMVGVPESSLDHWANQFVAKGFKIARVDQSESA------------ 375
Query: 186 FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDDGNVG--KIRNGVFGDGF 241
G+ + K E + E C + LV ++ DD + I+ + +
Sbjct: 376 LGKEMRERDGKKGGGKEEKIIRRELACVLTAGTLVEGAMLQDDMSTFCVAIKEAIIENL- 434
Query: 242 DVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAY 300
G+ V+ +TG EF D + E + P ELLL + +S++ ++L
Sbjct: 435 -PAFGIAFVDTATGQFFLTEFVDDVDMTKFETFVAQTRPQELLLEKSTVSQKALRILKNN 493
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
GP + ++ + + E+ + E +S + D PE E
Sbjct: 494 TGPTTIWNYLKPGKEFWEADITVREL-----DASEYFVSQDNDNIHAWPEALRQARDKEL 548
Query: 361 IMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQLEVLR 417
+M+ A +++L+ LER ++ +G + + + + + L TL +E+
Sbjct: 549 VMS-------AFGALVQYLRLLKLERDLITIGNFSWYDPIKKASSLVLDGQTLINMEIFA 601
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 602 NSFDGGVDGTLFQLLNRCMTPFGKRMFKQWVCHPLVDPQRINARLDAV------------ 649
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
D N+D ++ + QF +S LT + PD++R I+RI +F+ V++
Sbjct: 650 -------DALNADSSVRD-QF----ASQLTKM---PDLERLISRIHAANCRAQDFVRVLE 694
Query: 538 AILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN---- 593
+Q+ EY +LLK + S VIG+ K + +
Sbjct: 695 G-------FEQI----EY---------TMSLLKD---SGSGEGVIGQLIKSMPDLTELLE 731
Query: 594 --KEAAD--QGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
K A D Q +++ G + +++ ++ ++LD L+ R++LG + +
Sbjct: 732 YWKTAFDHNQAKESGILVPKPGVEEDFDSSQETIRQLHQDLDDLLKRTRRELGSTAICYR 791
Query: 650 SVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+ +E+P K +P NW ++++TK+ RY+ PE+ T + +L A E + + +
Sbjct: 792 DNGKEIYQMEVPIKVKNIPRNWDQMSATKQVKRYYFPELRTTIRKLQEAQETHSQIVKEV 851
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICS 766
F F +Y+ + +AV+ ++ LDCL +LA S + + RP FV+D V +
Sbjct: 852 SKRFYARFDEHYSTWLSAVRVVSQLDCLISLAKASSSLGEPSCRPTFVEDERSV-LEFEE 910
Query: 767 GRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
RHP L + +D+F+PND L ++TG N GKS +R + IMAQVG ++P
Sbjct: 911 LRHPCLISS-VDDFIPNDIQLGGSGPNIDLLTGANAAGKSTLLRMTCVAVIMAQVGCYLP 969
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS+
Sbjct: 970 CRSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSS 1029
Query: 887 HDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMD 946
+DGVA+A A L ++ H + F THY +A + +H + P
Sbjct: 1030 YDGVAVAQAVLHHVATHIGALGFFATHYHSLA---------------AEFENHPEIKPKR 1074
Query: 947 SK-----SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
K +++ VT+LYK+ GV+E SFG A + +P I RA V A + E
Sbjct: 1075 MKIHVDENERRVTFLYKLEDGVAEGSFGMHCAAMCGIPNKVIERAEVAAKQWE 1127
>gi|358390700|gb|EHK40105.1| hypothetical protein TRIATDRAFT_252385 [Trichoderma atroviride IMI
206040]
Length = 1184
Score = 305 bits (782), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 266/962 (27%), Positives = 447/962 (46%), Gaps = 118/962 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P P TL IP P + K++P E+Q E+K D ++ + G + +
Sbjct: 278 RLPDDPDYDPRTLF-IP-PGAWN----KFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYE 331
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
+DA + + N +P L+ V + + +KV V+Q ET
Sbjct: 332 KDATIGHQEFDFKMTDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMETN------- 384
Query: 181 GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDD--GNVGKIRNGV 236
G+ + K+ + A+ V + GC + LV ++ DD I+ +
Sbjct: 385 -----LGKEMREREDKSG-KKADKVISRKLGCVLTAGTLVDGSMLQDDMAAYCVSIKESI 438
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
D G+ + +TG F D R+ E ++ + P ELLL + L+ +T +
Sbjct: 439 VDDL--PAFGIAFTDTATGRFFLSGFVDDVDRTRFETLIAQIGPRELLLEKSGLATKTLR 496
Query: 296 MLLAYAGPAS---NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
+L P + N++ D L+ + Y GED E+
Sbjct: 497 ILKNNTSPTTIWTNLKPGTEFWDADTSRKELS--CAKYFVKGED-------------EEE 541
Query: 353 NHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF---RSLSGSMEMTLSANT 409
A++ + + DL + A+ +L+ LE + SF + + + + L T
Sbjct: 542 VWPEALQELRD-DDLVMSAVGGLTSYLRFLKLEGPLLSQGSFEIYKPIQKNSTLVLDGQT 600
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+ N NG+ GTL ++N +T +G RL R+WV HPLC+ + I+ RLDAV +
Sbjct: 601 LTNLELFSNTVNGNTDGTLFGLLNKCITPFGKRLFRQWVAHPLCNIDRINERLDAVELL- 659
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
N D ++ E QF + L + PD++R I+RI P
Sbjct: 660 ------------------NDDPSVRE-QF-------ASQLVKMPDLERLISRIHAGACKP 693
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSA------LLKRLILTASSPAVIG 583
+F+ V++ +Q+ EY + TL +A L+ RLI +S P +
Sbjct: 694 EDFVRVLEG-------FEQI----EY-----TMTLAAAFKGGNGLIDRLI--SSMPNLEE 735
Query: 584 KAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
A + N++ + LMI +G + + +Q K++L+ L+ + +L
Sbjct: 736 PLAYWSTAFNRQRVKEE---KLMIPESGIDEDFDASAARIQEIKDQLNDLLIEKKGELKC 792
Query: 644 RNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+ L++ V + IE P K+P +W ++++TK R++ P++ + +L A E +
Sbjct: 793 KTLKYTDVGKEIYQIEAPKAAKIPSSWRQMSATKDVKRWYFPQLTALVRELQEAEETHSQ 852
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQ 761
+ R F ++F Y + ++Q +A LDCL +LA S + + RP FV++ V
Sbjct: 853 LIREIASRFCRKFDADYETWLKSIQIVAQLDCLVSLAKASSSLGEPSCRPQFVEEERSV- 911
Query: 762 IHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQV 821
+ RHP + + D+F+PN+ L ++ ++TG N GKS +R + IMAQV
Sbjct: 912 MDFEELRHPCMINTV-DDFIPNNIKLGGDQAKINLLTGANAAGKSTVLRMSCIAVIMAQV 970
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
G FVPA SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELG
Sbjct: 971 GCFVPAKSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELG 1030
Query: 882 RGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV 941
RGTS++DGVA+A A L ++ H C+ F THY +A T+F + + ++
Sbjct: 1031 RGTSSYDGVAVAQAVLHHVATHIGCIGFFATHYHSLA---TEFENH------PEIRARRM 1081
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
+D + ++ +T+LYK+ GV+E SFG A + + I RA V A E E +SR+
Sbjct: 1082 QIHVDDE-ERRITFLYKLEDGVAEGSFGMHCAAMCGISDRVIKRAEVAAK--EWEHTSRL 1138
Query: 1002 QN 1003
++
Sbjct: 1139 KD 1140
>gi|326202164|ref|ZP_08192034.1| DNA mismatch repair protein MutS [Clostridium papyrosolvens DSM 2782]
gi|325987959|gb|EGD48785.1| DNA mismatch repair protein MutS [Clostridium papyrosolvens DSM 2782]
Length = 873
Score = 305 bits (781), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 267/942 (28%), Positives = 452/942 (47%), Gaps = 149/942 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +++K +Y D +L +G + F DAE+A++ L I L+
Sbjct: 5 TPMMQQYLDIKEQYKDCILFFRLGDFYEMFFSDAELASRELEITLTGRDCGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P N +V RLV+ G+KV + +Q E A+ G R + + T T+ D
Sbjct: 65 VPFHAANNYVARLVSKGYKVAICEQVEDPALAK------GIVKRDVIKVVTPGTVT---D 115
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ ++NYL+ + +NG F G+ +V+I+TGD
Sbjct: 116 ITMLDER---KNNYLMSIY---------KNGNF-------YGLASVDITTGDFYGTRITW 156
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
G R L + P+E+++ L E L N V F G A+
Sbjct: 157 GNTREKLFDEIAKYLPSEIIVNTELCADNE--LTCEIKQRFNTYVSTFEEGSFEYGNAMD 214
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT-IRHLKQFG 383
+ + +EN N ++ ++ V G + +E + Q + L+ I++ +
Sbjct: 215 TLRNQFENRA----LNIQEYDIAVNASGALLTYLE--------STQKVNLSHIQNFNLYA 262
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
LE M L AS R ++E+T E +R S G+LL +++ T+T G RL
Sbjct: 263 LEEYMILDASSRR---NLELT---------ETMREKSKK---GSLLWVLDKTMTSMGGRL 307
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LR+W+ PL + IS RL+AV E+ KN + VE +
Sbjct: 308 LRKWIEQPLINHGDISLRLNAVEEL------------------KNKFMARVEAR------ 343
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH--IDGEYREKVTS 561
L R DI+R + ++ + + IA+ +I Q+ + ++G E ++S
Sbjct: 344 ---ELLKRVYDIERLMGKVILGSVNCRDLIALKNSI----SQIPYIKEILNGFETEYISS 396
Query: 562 -----KTLHSAL-LKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+L L + + P I + II +G E
Sbjct: 397 CYEQLDSLEDVCNLIDISIIDDPPVTIKEGG--------------------IIKDGYNPE 436
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF--KVPLNWA 671
V + R A K+ + +L R++ G++NL+ F V G + IE+ ++ VP +
Sbjct: 437 VDKLRSASIQGKDWIAALEASEREKTGIKNLKVGFNRVFG--YYIEVTKSYFSLVPEEYI 494
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY +PE+ D + A E++ ++ + + + + ++ +ALA
Sbjct: 495 RKQTLANCERYITPELKEIEDNILGAEEKIVLLEYSLFVQIKDKIAEQLSRIKSTARALA 554
Query: 732 ALDCLHALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHA 789
+D L +LA ++ + + +P + V D +I I GRHPV++ + FVPNDT L
Sbjct: 555 EIDVLASLAEVADREGYCKPEISVSD----KIEIVDGRHPVVEKMTDKSGFVPNDTVLDM 610
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
E + IITGPNM GKS Y+RQ ALI +MAQ+GSFVPASSA++ ++D I+TR+GASD +
Sbjct: 611 EEDRLAIITGPNMAGKSTYMRQSALIVLMAQIGSFVPASSAKIGLVDRIFTRVGASDDLA 670
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL--EHKKCM 907
G+STF+ E++E + IL N T +SL+++DE+GRGTST DG++IA+A ++Y++ E C
Sbjct: 671 SGQSTFMVEMSEVANILTNATKRSLLVLDEIGRGTSTFDGLSIAWAVIEYIVSKEQLGCR 730
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ +++ K +G + Y ++ + K D DV +L K++ G ++ S
Sbjct: 731 TLFATHYHELTELEGKLSG-IKNYCIT----------VKEKGD-DVIFLRKIIRGGADGS 778
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQNRSAKR 1008
+G +VA+LA +P I RA I A L +A+++ + R K+
Sbjct: 779 YGIQVAKLAGVPQGVIDRAKEILANLDDADINRNGKVRKIKK 820
>gi|225679781|gb|EEH18065.1| DNA mismatch repair protein mutS [Paracoccidioides brasiliensis Pb03]
Length = 1256
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 271/974 (27%), Positives = 438/974 (44%), Gaps = 131/974 (13%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P T+ IP P + T K++P E+Q E+K K+ D ++ + G + + D
Sbjct: 339 PGHPDYDPRTIY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 392
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA--HGP 180
A + ++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 393 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREKQ 452
Query: 181 GKAGP--------FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVG 230
GK G R L+ + T TL V GG +D S Y CV + V
Sbjct: 453 GKTGGSVGKQEKIIRRELACVLTSGTL-----VDGGMLQDDM---STY--CVAIKEALVN 502
Query: 231 KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-L 289
+ VFG F V+ +TG EF D + E + P ELLL + +
Sbjct: 503 DL--PVFGIAF--------VDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELLLEKSVM 552
Query: 290 SKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVP 349
S + ++L N + + G E + T+ + N V
Sbjct: 553 STKALRIL-------KNNTIPTTLWNYLKPGKEFWE--------ADITVRELDASNYFVS 597
Query: 350 EQGNHRSAIEGIMNM---PDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEM 403
G++ A ++ + A+ A +++L+ +ER ++ +G + + + +
Sbjct: 598 PDGDNLLAWPQVLREARDKEFAMSAFGALVQYLRMLKIERDLITIGNFTWYDPIRKATSL 657
Query: 404 TLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLD 463
L TL LEV N+ +G + GTL ++N +T +G R+ ++WV HPL D I+ARLD
Sbjct: 658 VLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQWVCHPLVDTKKINARLD 717
Query: 464 AVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIF 523
AV D N+D + QF SS LT + PD++R I+R+
Sbjct: 718 AV-------------------DALNAD-NAIRNQF----SSQLTKM---PDLERLISRVH 750
Query: 524 HRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIG 583
+ +F+ V++ + L G E V + L +S P + G
Sbjct: 751 AGSCKAQDFLRVLEGFEQIDYTMGLLKETGS-GEGVIGQ-----------LVSSMPDLSG 798
Query: 584 KAAKLLSTVNK-EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
+ ++ +A D G +++ G + + + + ELD L+ RKQLG
Sbjct: 799 HLKYWKTAFDRSKAKDSG----ILVPEAGVEEDFDVSHDKITEIEYELDQLLKRVRKQLG 854
Query: 643 MRNLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
+ + + +E+P K VP +W ++++TK+ R++ PE+ + + QL A E
Sbjct: 855 STAIVYRDNGKEIYQLEVPIKIKTVPKSWDQMSATKQAKRFYFPELRSLIRQLQEAQETH 914
Query: 702 TIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEP 759
+ + + F F Y+ + AAV+ +A LDCL +LA S + RPVFVD+
Sbjct: 915 SQIVKEVAGRFYARFDENYSTWLAAVKVVAQLDCLISLAKASSALGYPSCRPVFVDEERS 974
Query: 760 VQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMA 819
+ + RHP + + D F+PND L + ++TG N GKS +R IMA
Sbjct: 975 I-LEFQELRHPCMLPNVGD-FIPNDVKLGGKAPNINLLTGANAAGKSTILRMTCTAVIMA 1032
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q+G VP SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DE
Sbjct: 1033 QIGCHVPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDE 1092
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
LGRGTS++DGVA+A A L ++ H + F THY +A +F G H
Sbjct: 1093 LGRGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEG------------H 1137
Query: 940 KVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ P + ++ VT+LYK+ GV+E SFG A + +P + RA + A + E
Sbjct: 1138 PEIAPRRMRIHVDEEERRVTFLYKLEEGVAEGSFGMHCASMCGIPNKVVERAEIAAKQWE 1197
Query: 995 AEVSSRVQNRSAKR 1008
+SR++ +R
Sbjct: 1198 H--TSRLKESLERR 1209
>gi|398409676|ref|XP_003856303.1| hypothetical protein MYCGRDRAFT_98500 [Zymoseptoria tritici IPO323]
gi|339476188|gb|EGP91279.1| hypothetical protein MYCGRDRAFT_98500 [Zymoseptoria tritici IPO323]
Length = 1199
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 255/924 (27%), Positives = 418/924 (45%), Gaps = 102/924 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K++ E+Q E+K + D ++ + G + + DA + ++ + N +P
Sbjct: 306 KFSAFEKQYWEIKQNFMDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPE 365
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAH-----GPGKAGP--FGRGLSALYTKATLE 200
L+ + V GFK+ V Q E+ K G GK R L+A+ T TL
Sbjct: 366 ASLDHWANQFVAKGFKIARVDQMESKLSKDMRERDGGGGKKEDKIIRRELAAVLTGGTL- 424
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
V GG + DD DG + G+ V+ +T
Sbjct: 425 ----VDGG------------MLQDDMATYCAAIKETEVDGMP-KFGIAFVDTATAQFQLS 467
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
EF D + E + + P E+LL + +L P + + F+
Sbjct: 468 EFVDDIDMTRFETFVAQIRPGEILLEKGCVSAKALRILKNNTPVTTIWNHLKPDKEFL-- 525
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A+ + N GE +ED+ D + R A E ++A AL I +L
Sbjct: 526 --TADKTRMKIN-GEGYFEKSEDEAADAWPKA-LREASE-----KEVAFPALGALIWYLS 576
Query: 381 QFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+ER ++ G A + + S + L +L LE+ N +GS GTL ++N +T
Sbjct: 577 MLKIERDLLTCGNFAWYEPIRKSSSLVLDGQSLINLEIFANTFDGSAEGTLFSMLNRCVT 636
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
+G R+LR+WV HPL D I+ R DAV D N+D T+++
Sbjct: 637 PFGKRMLRQWVCHPLGDARKINLRFDAV-------------------DALNADGTVMD-- 675
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ-QLHIDGEYR 556
+SL R PD++R I+RI P +F+ V++ +Q++ + I G +
Sbjct: 676 ------RFTSSLSRLPDLERLISRIHAGRCRPQDFLKVLEGF----EQIEYTMSILGSFG 725
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK-EAADQGDLLNLMIISNGQFSE 615
+ LL +LI+ + P + G ++ +A D+G L I G +
Sbjct: 726 D-------GDGLLGQLIV--AMPNLAGALEHWKDAFDRTKAKDEG----LFIPQPGVEED 772
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKV 673
+++ + + +EL+ L+ RK +G +++F + +E+P A K+P NW ++
Sbjct: 773 FDESQEVIDNVLKELNKLLVKARKDIGSSSIKFTDNGKEIYQLEVPIKACGKIPKNWKQM 832
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
++TK+ R++SPE+ + L A E V +A F F Y + AA++ +A L
Sbjct: 833 SATKQCKRWYSPELEELVQDLKEAQEVHGQVVKALAGRFFARFDIDYNTWLAALKVIAQL 892
Query: 734 DCLHALATLSRN--KNFVRPVFVDDHEPVQI-HICSGRHPVLDTILLDNFVPNDTNLHAE 790
DCL +LA S + RP FV+D + + RHP ++T NF+PND L +
Sbjct: 893 DCLISLAKTSASLGSPSCRPTFVEDENAKGVLEFKTLRHPCIETTT--NFIPNDIALGGD 950
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
++TG N GKS +R + I+AQVG +VP SA + +D I +R+GA D+I
Sbjct: 951 AASINLLTGANAAGKSTVLRMTCIAVILAQVGCYVPCESARMTPVDRIMSRLGAHDNIFA 1010
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ EL+E IL T +SLVI+DELGRGTS++DGVA+A + L ++ H + F
Sbjct: 1011 GQSTFMVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQSVLHHIATHVGSLGYF 1070
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY +A + + + ++ H + +DVT+LY++ GV+E S+G
Sbjct: 1071 ATHYHSLA-AEFQSHPEIAAKRMAVRVEHDI---------RDVTFLYQLEDGVAEGSYGM 1120
Query: 971 KVAQLAQLPPSCISRATVIAAKLE 994
A + + I RA A E
Sbjct: 1121 HCAAMCGISDKIIDRAEQAAQNWE 1144
>gi|254167808|ref|ZP_04874658.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289597150|ref|YP_003483846.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623336|gb|EDY35901.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289534937|gb|ADD09284.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 828
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 271/922 (29%), Positives = 431/922 (46%), Gaps = 167/922 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---AHLDHNFMTASIP 146
TPL +Q +K KY D +L VG + F +DA++ +K L I D A IP
Sbjct: 3 TPLMRQYHRIKAKYKDTILFFRVGDFYETFEDDAKLVSKELNIVLTRRSKDEPVPMAGIP 62
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY-----TKATLEA 201
L+ ++ RLV G+KV + +Q E P KA RGL T TL
Sbjct: 63 YHALDAYLSRLVKKGYKVAICEQLE-------DPAKA----RGLVRRDVVRVVTPGTL-- 109
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
ED ED +N+L + ++G A++ISTG+ GE
Sbjct: 110 IEDTLLTED-----NNFLFSIYK--------HKEIYG--------FAALDISTGEFFAGE 148
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ GL A +L L P+E+L L+ + +LA
Sbjct: 149 LD----FYGLNAEILRLQPSEILSNSKLNLDFQIKILA---------------------- 182
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
E + YE + ++ E + E G L A AL +
Sbjct: 183 --EEYYNDYEKILKEHFKVAELSGFGIGEYG--------------LRAAASAL------K 220
Query: 382 FGLERIMCLGASFRSLSGSME---MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
+ E M + SL G + + L + TL+ LE+ N +Y TL H MN T
Sbjct: 221 YAKENTMNDLKNITSLQGYFKDKYLILDSTTLKNLEIFHNVLGEDKY-TLYHTMNKCETP 279
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G+RLL+RW+ PL D + I+ RLDAV E+A
Sbjct: 280 MGARLLKRWMQRPLKDIDEINDRLDAVEELANKQ-------------------------- 313
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
+ S+ T L R DI+R TR+ A P + I++ +++ KQ +L I+ E
Sbjct: 314 -LLQDSIRTILSRIKDIERIKTRVSLGRAAPRDLISLKESL----KQADKLRINFE---- 364
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL-LNLMIISNGQFSEVA 617
S +LK +AS I +L+ E A GD + +I G E+
Sbjct: 365 -------SKILKN---SASKIYGIEGIIELI-----ENAINGDYPVGEGVIKEGYNEELD 409
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNS 675
++ +AK + + R+ G++NL+ + + IE+ +N KVP ++ + +
Sbjct: 410 EIKRIASNAKLLIGKMEERERRNTGIKNLKIGYNDVMGYYIEVSKSNLSKVPKHYRRKQT 469
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
K + R+ + E+ ++ A + + + + LK+ G + +++A +D
Sbjct: 470 LKNSERFVTDELKELEYKILSAKDRIYEIENKIYRDILKKLGEMIDVIERTAKSIAIIDV 529
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
+ +LA ++ N+ RP VD E + I I +GRHPV++ L +FVPNDT+++++ +
Sbjct: 530 ISSLARVALEMNYTRPE-VD--ESMDIEIRNGRHPVVE--LYTDFVPNDTHINSDARFI- 583
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
I+TGPNM GKS Y+RQVALI I+AQ+GSFVPA A++ ++D IYTR+GASD I +GRSTF
Sbjct: 584 ILTGPNMAGKSTYMRQVALIVILAQMGSFVPADYAKIGIVDRIYTRVGASDDITRGRSTF 643
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
+ E+ E + IL T +SL+++DE+GRGTST+DG+AIA++ +++ + +F THY
Sbjct: 644 MMEMVELANILNTATERSLILLDEIGRGTSTYDGLAIAWSITEHIHNSIRARTIFATHYH 703
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQ 974
+ D++ +V YH++ K QD + ++ KV+PG S+G +VA+
Sbjct: 704 HLIDLEN-VLDNVRNYHIA------------VKETQDGLIFVRKVMPGGMSKSYGIEVAK 750
Query: 975 LAQLPPSCISRATVIAAKLEAE 996
LA +P + RA I +E E
Sbjct: 751 LAGVPEKVVKRAKEILNLIEEE 772
>gi|120434623|ref|YP_860313.1| DNA mismatch repair protein MutS [Gramella forsetii KT0803]
gi|189030728|sp|A0LXZ7.1|MUTS_GRAFK RecName: Full=DNA mismatch repair protein MutS
gi|117576773|emb|CAL65242.1| DNA mismatch repair protein MutS [Gramella forsetii KT0803]
Length = 871
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 271/944 (28%), Positives = 443/944 (46%), Gaps = 146/944 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FM 141
++K TPL QQ +K KYPD +L+ VG + FGEDA AA++L I +N
Sbjct: 6 SQKVTPLMQQYNSIKLKYPDAMLLFRVGDFYETFGEDAVKAARILNIVLTNRNNGGERTE 65
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A P LN ++ +LV AG +V + Q E + RG++ L T
Sbjct: 66 LAGFPHHSLNTYLPKLVKAGQRVAICDQLEDPKMTK------TIVKRGVTELVTPG---- 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V +D +SN +C V FG LGV +++STG+ + +
Sbjct: 116 ---VAMNDDILNSKSNNFLCAVH------------FGKK---NLGVSFLDVSTGEFLCAQ 157
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N ++ + +L + P+E+L+ + K+ + + CF
Sbjct: 158 GNTEYI----DKLLQNFGPSEILVQKKFKKEFNESF-------------GKDKHCFYLDD 200
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQG-NHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ ++ + E+TL N Q + G +H EGI +A A+ + +
Sbjct: 201 WIFKI-----DYSEETL-NAHFQTKSLKGFGIDHLE--EGI-----IASGAVLYYLAETR 247
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
L+ I S ++ + + T++ LE+ +S + TLL +++ T++ G
Sbjct: 248 HHRLQHI----NSINRIAEEQYVWMDRFTIRNLELY--HSTAANAVTLLDVIDKTISPMG 301
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL+RW+ PL D +I RL V D I P+
Sbjct: 302 GRLLKRWLALPLKDAEMIEKRLQVV------------------------DFLIKNPE--- 334
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE-KV 559
IL+++ + D++R I+++ + +P E + ++ L A +++L + K+
Sbjct: 335 ILANIQDQIREISDLERLISKVATQKISPRE-VNQLKNSLNAIIPVKELALKCNNEALKI 393
Query: 560 TSKTLHSALLKRLILTAS----SPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
LHS L R ++ S +P +I + +I++G SE
Sbjct: 394 IGDNLHSCDLLREKISESISEDAPVLIQRGG--------------------VIASGFSSE 433
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKV 673
+ R S K+ LD +I ++ G+ +L+ S + + IE+ K VP W +
Sbjct: 434 LDELRGLAFSGKDYLDKMIQRETEKTGISSLKIGSNNVYGYYIEVRNTHKDKVPEEWTRK 493
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY + E+ ++ A E++ + + + + Y Q + +A L
Sbjct: 494 QTLVNAERYITEELKEYESKILGAEEKILHLEQELFGKLIAWMAEYIDPVQQNARLIARL 553
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
DCL + A ++ +N+ +P D + + I GRHPV++ L V NLH +RE
Sbjct: 554 DCLCSFAQQAQAENYSKPEITDSY---GMDIEEGRHPVIEKQLPPGEVYVTNNLHLDREE 610
Query: 794 CQII--TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
QII TGPNM GKS +RQ ALI +MAQ+GSFVPA SAE+ ++D I+TR+GASD+I G
Sbjct: 611 QQIIMITGPNMSGKSAILRQTALIVLMAQMGSFVPARSAEIGLVDKIFTRVGASDNISMG 670
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLF 910
STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL EH K LF
Sbjct: 671 ESTFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPAKPKTLF 730
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ ++ F + ++VS + +V +L K+VPG SE SFG
Sbjct: 731 ATHYHELNEMCETFE-RIKNFNVSV-----------KELKDNVLFLRKLVPGGSEHSFGI 778
Query: 971 KVAQLAQLPPSCISRATVIAAKLEA----EVSSRVQNRSAKRDL 1010
VA++A +P + RA I AKLEA E S V +SA+ ++
Sbjct: 779 HVAKMAGMPQMVLHRANKILAKLEASHSMEDSGAVLKKSAEDEM 822
>gi|326477690|gb|EGE01700.1| DNA mismatch repair protein msh6 [Trichophyton equinum CBS 127.97]
Length = 1215
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 263/962 (27%), Positives = 444/962 (46%), Gaps = 111/962 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL P S K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 298 PDYDPRTLYIPPLAWS------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 351
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------AIKA 177
++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 352 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKG 411
Query: 178 HGPGKAGP----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
+ GKA R L+ + T TL + G S Y V + +
Sbjct: 412 NKMGKAQKEDKVIKRELACVLTTGTLVEGSMIQGDM------STYCVAIKE--------- 456
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
V DG G+ V+ +TG +F D + E + P ELLL + +S +
Sbjct: 457 --VIIDGLPA-FGISFVDTATGQFFLSQFVDDVDMTRFETFVAQTRPQELLLEKSVMSTK 513
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
++L GP + ++ + + E+ + G+ +S ++++ P+
Sbjct: 514 ALRILKNNTGPTTLWNYLKPGKEFWEADVTVREL-----DAGDYFVSEDKNKASAWPQ-- 566
Query: 353 NHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANT 409
A++ + DL + A +++L+ + R ++ +G + + + + L T
Sbjct: 567 ----ALQDARDK-DLVMSAFGALLQYLEMLKIGRDLITIGNFTWYDPIKKASSLVLDGQT 621
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+ N +GS GTL H++N +T +G RL ++WV HPL D I+ARLDAV +
Sbjct: 622 LINLEIFANTYDGSSEGTLFHLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLDAVESL- 680
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
N+D T+ E QF SS LT + PD++R I+R+ T
Sbjct: 681 ------------------NADSTVRE-QF----SSQLTKM---PDLERLISRVHAGTCKA 714
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
+F+ V++ +Q++ + G +E + L L+ ++ P + G
Sbjct: 715 QDFVRVLEGF----EQIE--YTMGLLKEAGSGHGLIGQLI------SAMPDLNGLLQFWE 762
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ ++ A + D+L + G E ++K ++ +EEL+ ++ RK+L + F
Sbjct: 763 TAFDRAKARESDIL---VPEEGIEEEFDASKKNIEQLEEELEQVLQRTRKELKCSTIVFK 819
Query: 650 SVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+ +E+P K +P +W ++++TK+ RY+ PE+ + +L A E V +
Sbjct: 820 DNGKEIYQLEVPIKIKNIPKSWDQMSATKQVKRYYFPELRALIRKLQEARETHAQVVKGV 879
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICS 766
F F Y+ + AAV+ +A LDCL LA S RP+FV+D V +
Sbjct: 880 AGRFYARFDRDYSSWLAAVKIIAQLDCLIGLAKASTALGHPSCRPIFVNDERSV-LDFKE 938
Query: 767 GRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
RHP + + D F+PND L + ++TG N GKS +R IMAQ+G +VP
Sbjct: 939 LRHPCMMPNVGD-FIPNDVKLGGDTSNINLLTGANAAGKSTVLRMTCTAVIMAQIGCYVP 997
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
A L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS+
Sbjct: 998 CEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSS 1057
Query: 887 HDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMD 946
+DGVA+A A L ++ H + F THY +A +F G + + ++ +D
Sbjct: 1058 YDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEGH------PEIAARRMRIHVD 1108
Query: 947 SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSA 1006
+++ VT+LYK+ GV+E SFG A + +P + A + A + E +SR++
Sbjct: 1109 D-AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEIAAKQWEH--TSRMKESLE 1165
Query: 1007 KR 1008
KR
Sbjct: 1166 KR 1167
>gi|406864091|gb|EKD17137.1| DNA mismatch repair protein Msh6 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1949
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 262/933 (28%), Positives = 429/933 (45%), Gaps = 100/933 (10%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K++P E Q E+K K+ D ++ + G + + DA + ++ + N +P
Sbjct: 1050 KFSPFETQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPE 1109
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
L+ + V G+K+ V Q E+A K + G+ K + A+ +
Sbjct: 1110 MSLDHWANQFVAKGYKIARVDQCESALGKEMREAEGKSTGK-------KVVVNKADKIIR 1162
Query: 208 GEDGCGGESNYLV--CVVDDDGNVG--KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
E C LV ++ DD I+ + D GV V+ +TG EF
Sbjct: 1163 RELACVLTGGTLVEGSMLQDDMATFCVAIKEQMIDDL--PSYGVAFVDTATGQFFLSEFV 1220
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
D + E ++ + P ELLL + LS + ++L P + S + +
Sbjct: 1221 DDVDLTKFETLIAQIRPQELLLEKSHLSTKALRILKNNTTPTTIWNHLKPSSEFWT---- 1276
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDV-PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
AEV +G + +E+ ++ PE A+E + D + A+ +++L+
Sbjct: 1277 -AEVTR--RELGCNGYFVSEEGGSEIWPE------ALEAAKSS-DALMSAMGALVQYLRT 1326
Query: 382 FGLERIMCLGASFRSLS---GSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
LER + +F + S + L TL LEV N +GS+ GTL ++N +T
Sbjct: 1327 LKLERNLLSQQNFTAYSPIQKGTTLVLDGQTLINLEVFANTFDGSKAGTLFALLNRCVTP 1386
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
+G R+ R+WV HPL D + I+ RLDAV D N D T+ + QF
Sbjct: 1387 FGKRMFRQWVCHPLADADRINERLDAV-------------------DMLNKDRTLSD-QF 1426
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
+SS+ PD++R I+RI + P +F+ V+ +Q+ E E+
Sbjct: 1427 VASMSSM-------PDLERLISRIHAGSCRPDDFVKVIDG-------FEQIEYTMELLER 1472
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
S ++ RLI + P + G + + + A + +L + G E
Sbjct: 1473 --SAKGGKGIVDRLI--NAMPDLTGPIKFWKTAFDHQKAKESRIL---VPERGVEEEFDE 1525
Query: 619 ARKAVQSAKEELDSLINMCRKQL-GMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTK 677
++ ++ + EL+ L+ RK+L G + + F ++ + +E+PA+ KVP +W ++S
Sbjct: 1526 SQDRIEEIEGELEDLLKRKRKELGGSQKINFKNIGKEVYQLEVPASIKVPKDWQMMSSAA 1585
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL- 736
RY+ PE+ T + QL A E + + F Y+ + AV+ ++ LDCL
Sbjct: 1586 AFKRYYFPELKTLIRQLQEAQETHGQIVKVVARKLYARFDEDYSLWLPAVRTVSHLDCLI 1645
Query: 737 -HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
A A+ + + RP FV+ V I RHP + + D F+PND L +
Sbjct: 1646 SLAAASAALGEPSCRPTFVESERSV-IEFEELRHPCMLPNVTD-FIPNDVKLGGDAANIN 1703
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
++TG N GKS +R + IMAQ+G +VP SA L +D I +R+GA+D+I +STF
Sbjct: 1704 LLTGANAAGKSTILRMTCVAVIMAQIGCYVPCISATLTPVDRIMSRLGANDNIFAAQSTF 1763
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
EL+E IL T +SLVI+DELGRGTS++DGVA+A + L ++ H C F THY
Sbjct: 1764 FVELSETKKILAEATPRSLVILDELGRGTSSYDGVAVAQSVLHHVATHVGCTGFFATHYH 1823
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGF 970
+A T+F G H + P + ++ VT+LY++ GV+E SFG
Sbjct: 1824 SLA---TEFAG------------HPEIAPKRMQIHVDEGNRRVTFLYRLEDGVAEGSFGM 1868
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
A + +P I RA V A E E +SR+++
Sbjct: 1869 HCAAMCGIPAKVIDRAEVAAK--EWEHTSRLKD 1899
>gi|402222110|gb|EJU02177.1| hypothetical protein DACRYDRAFT_21918 [Dacryopinax sp. DJM-731 SS1]
Length = 975
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 275/968 (28%), Positives = 445/968 (45%), Gaps = 119/968 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
KT K+P + I P + +TP E+Q E+K + D +LM + G + +
Sbjct: 55 KTGKRPGEDGYDPRTIFIPKNAWA---SFTPFEKQFWEIKQNHYDTVLMFQKGKFYELYE 111
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA-----AI 175
+DAE+ + + +P N + + G+KVG V Q ET +
Sbjct: 112 QDAEIGHREFDLKLTDRVKMKMVGVPESSFNFWAAKFLAKGYKVGRVDQVETQLGAEMRV 171
Query: 176 KAHGPGKAGP----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGK 231
HG G R L+ + T TL E + V D+ G+
Sbjct: 172 AKHGNSSGGSGKEIVRRELNKVLTNGTLVDPE----------------LMVDDEAGHCVS 215
Query: 232 IRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELL-LGQPLS 290
I+ +G + G+ ++ +TG+ F D ++ LE V+ L P E++ LS
Sbjct: 216 IK-----EGKNNTFGICTLDAATGEFNLCCFEDDACKTRLETVMRQLRPKEVVHCTDNLS 270
Query: 291 KQTEKMLLAYAGPASNVRVECA-SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD-V 348
T ++L P S + S + + L E+++LY D+ S + +++ +
Sbjct: 271 ISTIRLLRTVV-PGSCLWTALKPSLESWSYERTLDELVNLYPATQNDSSSVIQGRDLSGL 329
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTL 405
P AI ++ AV+AL I +L Q + + + +F + M + L
Sbjct: 330 P------PAIRTVVTEV-TAVEALGGMIWYLGQLNVGKDLLTMRNFNIYDPMRRGMGLVL 382
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
TL +EVL NS ++ GTLL+++N +T +G RL R W+ PL + I+ARLDAV
Sbjct: 383 DGQTLAHIEVL-VNSESTDEGTLLNLLNRCVTPFGKRLFRIWLCMPLREVKAINARLDAV 441
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
++ + P F + L PD++R ++R+ R
Sbjct: 442 DDL------------------------MSRPSFEATFGKLSRGL---PDLERMVSRVHAR 474
Query: 526 TATPSEFIAVMQAILYAGKQLQQLHID-GEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
T +F +++A +Q+Q+ D E + +S+++ L +S+P +
Sbjct: 475 TCKTKDFEKLIEAF----RQVQRGFSDLAEEADDFSSRSIGD-------LLSSAPDL--- 520
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEV-ARARKAVQSAKEELDSLINMCRKQLGM 643
+ L + + DLL + ++ + +V A + +E+LDSL +K+L
Sbjct: 521 -SPHLRHIQGMYHVKDDLLYPVQGADSDYEQVQAEIDRLEARLQEDLDSL----KKKLNF 575
Query: 644 RNLEFMSVSGIT---HLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANE 699
NL + T +L+E P++FK +P W K TK R+ P++++ + +L A E
Sbjct: 576 SNLVYWHSPLGTKEIYLVEAPSSFKGIPKGWTKGGGTKAVHRWQVPDLMSTIRKLKEARE 635
Query: 700 ELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDH 757
L V + EF + AV+ +A LDCL +LA S+ + RP FV+
Sbjct: 636 TLKEVIKQYKLKLFNEFDQDRDIWLRAVRVVAELDCLFSLAKSSQALGEPSCRPQFVESD 695
Query: 758 EPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIG 816
+ RHP L D F+PND L ++E ++TGPNMGGKS +R A
Sbjct: 696 NAF-LDFQQLRHPAF---LTDRPFIPNDVKLGGDKEKIMLLTGPNMGGKSTLMRMTAAGV 751
Query: 817 IMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVI 876
IMAQ+G +VPA+ A+L +D I TRMGA D++ STF EL+E ILR+ T +SLVI
Sbjct: 752 IMAQLGMYVPAAFAKLAPVDAILTRMGAYDNMFTNASTFKVELDECCKILRDATPRSLVI 811
Query: 877 VDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL 936
+DELGRGTST DG+AIA A L +L H + F THY + + K H +
Sbjct: 812 LDELGRGTSTFDGMAIAGAVLHHLATHTLALSCFATHYSTLTEKK----------HPNIR 861
Query: 937 TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
H MG + ++ + +LYK++ GV+ SSFG VA LA +P + + RA I+ E
Sbjct: 862 NMH--MGTTVDEHERQLVFLYKLIDGVATSSFGTHVASLAGVPTAVVERAEEISRDFAHE 919
Query: 997 VSSRVQNR 1004
+++ R
Sbjct: 920 FETKMARR 927
>gi|326473228|gb|EGD97237.1| DNA mismatch repair protein Msh6 [Trichophyton tonsurans CBS 112818]
Length = 1215
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 263/962 (27%), Positives = 444/962 (46%), Gaps = 111/962 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL P S K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 298 PDYDPRTLYIPPLAWS------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 351
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------AIKA 177
++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 352 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKG 411
Query: 178 HGPGKAGP----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
+ GKA R L+ + T TL + G S Y V + +
Sbjct: 412 NKMGKAQKEDKVIKRELACVLTTGTLVEGSMIQGDM------STYCVAIKE--------- 456
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
V DG G+ V+ +TG +F D + E + P ELLL + +S +
Sbjct: 457 --VIIDGLPA-FGISFVDTATGQFFLSQFVDDVDMTRFETFVAQTRPQELLLEKSVMSTK 513
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
++L GP + ++ + + E+ + G+ +S ++++ P+
Sbjct: 514 ALRILKNNTGPTTLWNYLKPGKEFWEADVTVREL-----DAGDYFVSEDKNKASAWPQ-- 566
Query: 353 NHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANT 409
A++ + DL + A +++L+ + R ++ +G + + + + L T
Sbjct: 567 ----ALQDARDK-DLVMSAFGALLQYLEMLKIGRDLITIGNFTWYDPIKKASSLVLDGQT 621
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+ N +GS GTL H++N +T +G RL ++WV HPL D I+ARLDAV +
Sbjct: 622 LINLEIFANTYDGSSEGTLFHLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLDAVESL- 680
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
N+D T+ E QF SS LT + PD++R I+R+ T
Sbjct: 681 ------------------NADSTVRE-QF----SSQLTKM---PDLERLISRVHAGTCKA 714
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
+F+ V++ +Q++ + G +E + L L+ ++ P + G
Sbjct: 715 QDFVRVLEGF----EQIE--YTMGLLKEAGSGHGLIGQLI------SAMPDLNGLLQFWE 762
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ ++ A + D+L + G E ++K ++ +EEL+ ++ RK+L + F
Sbjct: 763 TAFDRAKARESDIL---VPEEGIEEEFDASKKNIEQLEEELEQVLQRTRKELKCSTIVFK 819
Query: 650 SVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+ +E+P K +P +W ++++TK+ RY+ PE+ + +L A E V +
Sbjct: 820 DNGKEIYQLEVPIKIKNIPKSWDQMSATKQVKRYYFPELRALIRKLQEARETHAQVVKGV 879
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICS 766
F F Y+ + AAV+ +A LDCL LA S RP+FV+D V +
Sbjct: 880 AGRFYARFDRDYSSWLAAVKIIAQLDCLIGLAKASTALGHPSCRPIFVNDERSV-LDFKE 938
Query: 767 GRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
RHP + + D F+PND L + ++TG N GKS +R IMAQ+G +VP
Sbjct: 939 LRHPCMMPNVGD-FIPNDVKLGGDTSNINLLTGANAAGKSTVLRMTCTAVIMAQIGCYVP 997
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
A L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS+
Sbjct: 998 CEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSS 1057
Query: 887 HDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMD 946
+DGVA+A A L ++ H + F THY +A +F G + + ++ +D
Sbjct: 1058 YDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEGH------PEIAARRMRIHVD 1108
Query: 947 SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSA 1006
+++ VT+LYK+ GV+E SFG A + +P + A + A + E +SR++
Sbjct: 1109 D-AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEIAAKQWEH--TSRMKESLE 1165
Query: 1007 KR 1008
KR
Sbjct: 1166 KR 1167
>gi|449298624|gb|EMC94639.1| hypothetical protein BAUCODRAFT_111690 [Baudoinia compniacensis UAMH
10762]
Length = 1206
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 274/1016 (26%), Positives = 436/1016 (42%), Gaps = 146/1016 (14%)
Query: 14 APKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKR-----KVVSSLFPPKTPKKPKL 68
AP SNQ P+ PQ P K A + P++R ++ + P P P
Sbjct: 244 APPSNQ----PRKLPPKRPQPDPNKKQKAHTT-DPSERYTWLAHILDADRHP--PDHPDY 296
Query: 69 SPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAK 128
P TL P + K++P E+Q E+K K+ + ++ + G + + DA + +
Sbjct: 297 DPRTLYIPPLAWN------KFSPFEKQYWEIKQKFWNTIVFFKKGKFYELYENDATIGHQ 350
Query: 129 VLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP--- 185
+ + N +P L+ + V G+K+ V Q ETA K G
Sbjct: 351 LFDLKLTDRVNMRMVGVPEASLDHWANQFVAKGYKIARVDQLETALGKDMRERDDGGKKK 410
Query: 186 ----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF 241
R L+++ T TL V GG + DD V DG
Sbjct: 411 EEKVIRRELASVLTSGTL-----VDGG------------MLQDDMATYCAAIKEVERDGR 453
Query: 242 DVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAY 300
G+ V+ +T + D + E + P EL+L + +S + ++L
Sbjct: 454 PC-FGIAFVDTATAQFHLADIVDDAEMTRFETFVAQTRPGELILEKSCISTKALRILKNN 512
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDT-LSNNEDQNMDVPEQGNHRSAIE 359
P + ++ ++ D E M + + +E
Sbjct: 513 TAPTT-----------------------IWNHLKPDKEFLTAEKARMTIDGEAYFDKFVE 549
Query: 360 -GIMNMP---------DLAVQALALTIRHLKQFGLER--IMCLG-ASFRSLSGSMEMTLS 406
GI P DL A+ I +L +ER + C A + + + + L
Sbjct: 550 DGIDTWPAALRQAKDKDLTFSAVGALIWYLSTLKIERDLVTCGNFAWYDPIRKASSLVLD 609
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
+L LE+ N +GS GTL +++N +T +G R LR+WV HPL D I RLDAV
Sbjct: 610 GQSLINLEIFANTFDGSTEGTLFNMLNRCITPFGKRTLRQWVCHPLADPRRIDQRLDAV- 668
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
D N+D T+++ SL R PD++R I+R+
Sbjct: 669 ------------------DALNADSTVMD--------RFTASLSRLPDLERLISRVHAGR 702
Query: 527 ATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
P +F+ V++ + L G +L +LI S P + G
Sbjct: 703 CRPQDFVKVLEGFEQIEYTMSLLGSFGS----------GEGMLGQLI--TSMPNLAGALH 750
Query: 587 KLLSTVNK-EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
++ +A D G + I G +E +++ + + +++L L+N RK LG
Sbjct: 751 DWKDAFDRPKAKDDG----IFIPQPGVEAEFDESQERIDNIEKDLQKLLNKARKDLGSSA 806
Query: 646 LEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
++F + +E+P K +P NW +++STK R++SPE+ + L A E
Sbjct: 807 IKFTDNGKEIYQLEVPIKVKGTIPSNWKQMSSTKAVKRWYSPELERLVRDLKEAQETHAQ 866
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQ 761
V +A F F Y+ + AAV+ +A LDCL +LA S + RP FVDD
Sbjct: 867 VVKALNGRFYARFDEDYSIWLAAVKIIAQLDCLISLAKASSSLGAPSCRPEFVDDDSARS 926
Query: 762 I-HICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
+ RHP ++T NF+PND L + ++TG N GKS +R + I+AQ
Sbjct: 927 VLDFTELRHPCIETTT--NFIPNDILLGGDEPSITLLTGANAAGKSTVLRMTCVAVILAQ 984
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G +VP +SA + +D I +R+GA D+I G+STF+ EL+E IL T +SLVI+DEL
Sbjct: 985 IGCYVPCNSARMTPVDRIMSRLGAQDNIFAGQSTFMVELSETKKILSEATPRSLVILDEL 1044
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFT--GSVGTYHVSYLTS 938
GRGTS++DGVA+A A L ++ H + F THY +A +F + ++
Sbjct: 1045 GRGTSSYDGVAVAQAVLHHVATHVGALGYFATHYHSLA---AEFAPHPEIAPKRMAVRVE 1101
Query: 939 HKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
H + +DVT+LYK+ G++E S+G A + +P ISRA A E
Sbjct: 1102 HDI---------RDVTFLYKLENGIAEGSYGMHCAAMCGIPNRVISRAEEAAQAWE 1148
>gi|402086030|gb|EJT80928.1| DNA mismatch repair protein msh6, variant [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1235
Score = 303 bits (777), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 276/967 (28%), Positives = 432/967 (44%), Gaps = 135/967 (13%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P+ + +P T+ IP PS+ K ++P E+Q E+K K D ++ + G + + D
Sbjct: 314 PEDAEFNPATIY-IP-PSAW----KNFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYEND 367
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA----H 178
A + ++ + N +P L + V + V G+KV V Q E+A K
Sbjct: 368 ATIGHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFVAKGYKVARVDQMESALGKEMRERD 427
Query: 179 GPGKAGP---------FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDG 227
PG R L+ + T TL V G +D + Y V + +
Sbjct: 428 DPGAKKAKGAAKADKIIRRELACILTGGTL-----VEGSMLQDDM---ATYCVAIKESTL 479
Query: 228 NVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ 287
N N FG F V+ +TG +F D + LE + P ELLL +
Sbjct: 480 N----GNPAFGIAF--------VDAATGQFFLSQFEDDVDLTRLETFVAQTCPRELLLEK 527
Query: 288 P-LSKQTEKML---------LAYAGPASNV-RVECASRDCFIGGGALAEVMSLYENMGED 336
LS + ++L Y P + + A RD G Y + +
Sbjct: 528 ARLSTKALRILKNNTTPTTIWNYLKPGAEFPEPDAAVRDLDSSG---------YFSKAAE 578
Query: 337 TLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRS 396
+ + DQ PE A+E + L + A+ + +L+ LER + SF
Sbjct: 579 GEAGDADQEEAWPE------ALEKSRDK-SLLISAVGALVHYLRVLKLERSLLSQGSFEW 631
Query: 397 LSG---SMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLC 453
S + + L +L LE+ N+ NG GTL ++N +T +G RL R+WV HPLC
Sbjct: 632 YSPIHRNGTLILDGQSLINLEIFSNSVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLC 691
Query: 454 DRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSP 513
+ I+ RLDAV D N+D +I E QF ++S + P
Sbjct: 692 NTQKINERLDAV-------------------DMLNADRSIRE-QFSSLMSKM-------P 724
Query: 514 DIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLI 573
D++R I+RI +F+ V++ + L G + L+ RLI
Sbjct: 725 DLERLISRIHAGVCKAEDFVRVLEGFEQIDYAMSMLSAFGG----------GNGLVDRLI 774
Query: 574 LTA---SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEEL 630
+ P K A K+ DQ L++ G + + + K EL
Sbjct: 775 GSMPDLKEPLGFWKGA----FDRKKVRDQ----KLLVPEKGIEEDFDESAANIARIKREL 826
Query: 631 DSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTA 690
+L++ + L + L+F V + +E P KVP +W ++++T RY+ E+
Sbjct: 827 HALLDRQKAALKCKTLKFTDVGKEIYQVEAPKATKVPKDWRQMSATSSVKRYYFGELDEL 886
Query: 691 LDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNF 748
+ +L A E + + + F K F Y + A++ ++ LDCL LA S +
Sbjct: 887 VRELQEAEETHSQIVKDVAARFFKRFDVDYEVWIQAIRIISQLDCLICLAKASSSLGDPS 946
Query: 749 VRPVFVDDHEPVQIHICSGRHP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSC 807
RPVFVDD V + RHP +L+T+ D+F+PND L + ++TG N GKS
Sbjct: 947 CRPVFVDDERSV-LEFGELRHPCMLNTV--DDFIPNDIKLGGDEPNINLLTGANAAGKST 1003
Query: 808 YIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILR 867
+R + IMAQ+G +VPA SA L +D I +R+GA+D+I +STF EL+E IL
Sbjct: 1004 VLRMSCIAVIMAQIGCYVPARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILS 1063
Query: 868 NCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGS 927
T +SLVI+DELGRGTS++DGVA+A A L ++ H C+ F THY +A T+F G
Sbjct: 1064 EATPRSLVILDELGRGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLA---TEFEGH 1120
Query: 928 VGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
+ + ++ +D + + VT+LY++ GV+E SFG A + + I RA
Sbjct: 1121 ------PEIRARRMQIQVD-EGRRRVTFLYRLEDGVAEGSFGMHCAAMCGISGRVIERAE 1173
Query: 988 VIAAKLE 994
V A + E
Sbjct: 1174 VAAREWE 1180
>gi|254567730|ref|XP_002490975.1| Protein required for mismatch repair in mitosis and meiosis, forms a
complex with Msh2p to repair bo [Komagataella pastoris
GS115]
gi|238030772|emb|CAY68695.1| Protein required for mismatch repair in mitosis and meiosis, forms a
complex with Msh2p to repair bo [Komagataella pastoris
GS115]
gi|328352492|emb|CCA38891.1| DNA mismatch repair protein mutS [Komagataella pastoris CBS 7435]
Length = 1173
Score = 303 bits (777), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 264/958 (27%), Positives = 430/958 (44%), Gaps = 120/958 (12%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P+ P TL PSS + +TP E+Q E+K+K D ++ + G + + DA++
Sbjct: 250 PEYDPRTLF---IPSSAWS---SFTPFEKQYWEIKSKMYDCVVFFKKGKFYELYENDADI 303
Query: 126 AAKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA-HGPGK 182
A L + N A +P + +NAG+KV V Q E+ K GK
Sbjct: 304 AHNEFDLKLAGGGRANMRLAGVPEMSFDYWANAFINAGYKVAKVDQKESMLAKEIREKGK 363
Query: 183 AGPFGRGLSALYTKATLEAAEDVGGGEDGC---GGESNYLVCVVDDDG----NVGKIRNG 235
T+ E V E C GG + D+ ++ ++ NG
Sbjct: 364 ---------------TITKEEKVIKRELQCVLTGGTLTDESMLTDEMATYCLSLKEVDNG 408
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEK 295
+ G F GV V+ +TG + EF D + LE +L + P E+L+ +
Sbjct: 409 LDGRTF----GVCFVDTATGKMRLTEFEDSVECTRLETLLAQVRPKEVLVAKNQISPLTA 464
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMS---LYENMGEDTLSNNEDQNMDVPEQG 352
+L + P+S + + F+ E ++ +E D LSN ++ E+
Sbjct: 465 RILRFNSPSSCIWNKLKPDTEFLNHEVTFEELTRGKYFEASDLDDLSNYPPLLVEYHEKH 524
Query: 353 NHRSAIEGIMNMPDLAVQALALTIRHLKQFGL-ERIMCLG--ASFRSLSGSMEMTLSANT 409
+ +A A + +LK L E I+ +G + + + MT+ T
Sbjct: 525 H-------------VAFSAFGALLWYLKSLKLDESIISMGNISPYDPYQHATSMTMDGVT 571
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
LQ LE+ N +GS GTL ++N T +G RL + WV HPL + I RLD+V
Sbjct: 572 LQNLEIFANTFDGSNKGTLFKVLNRATTPFGKRLFKDWVVHPLLLKKSIDERLDSV---- 627
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
++ + + + +I + +L R PD++R ++RI +
Sbjct: 628 --------------------ELLLNDGELKHIF---INTLSRLPDLERLLSRIHSGSLKI 664
Query: 530 SEFIAVMQAILYAGKQLQQLHID-GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL 588
+F V++ K ++ L GE E ++ +L K IL+ + + +K
Sbjct: 665 QDFTKVIEGFERISKLVRTLRSSFGENFE-----SIGGSLGK--ILSQLPQELEIQVSKW 717
Query: 589 LSTVNKEAA-DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
++ ++ AA QG L+I G E +++ +++ K++L+ + R++L + +E
Sbjct: 718 ATSFDRVAATSQG----LLIPEPGVEEEFDQSKLKIENLKDKLNQFLRQYRRELKCQEME 773
Query: 648 FMSVSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
F +LIE+P KVP +W ++ ST K RY SPEV + +L A E I+
Sbjct: 774 FRDSGKEIYLIEVPKKVISKVPKDWQQMGSTSKVTRYWSPEVKLVVRELMEATELHKILM 833
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIH 763
++F Y+ + ++ + ++DCL +LA S + RP VD E I
Sbjct: 834 DTLQLKVYRKFDENYSLWSETIRCIGSIDCLISLANASESLGSPSCRPEIVDKDEAF-ID 892
Query: 764 ICSGRHPVL---DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
RHP +F+PND L ++TG N GKS +R + IMAQ
Sbjct: 893 FEELRHPCFIPGGASGSRDFIPNDVKLGNGFANIALLTGANAAGKSTVLRMTCIATIMAQ 952
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G FVPAS A L +D I TR+GA+D+I QG+STF EL+E IL+N T +SL+++DEL
Sbjct: 953 IGCFVPASKATLVPVDKIMTRLGANDNIMQGKSTFYVELSETKRILQNATPRSLLVLDEL 1012
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRG S+ DG AIA A L ++ H + + F THY GT S++ +
Sbjct: 1013 GRGGSSSDGFAIAEACLHHIATHIQSIGFFATHY--------------GTLGASFIGHPQ 1058
Query: 941 V----MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
V M + +S + +T+LYK+ G S SFG VA + +P + + A L+
Sbjct: 1059 VMPLRMAILVDESSKTITFLYKLEKGASNGSFGMHVATMCGIPKEIVDNVEIAAKNLK 1116
>gi|402086031|gb|EJT80929.1| DNA mismatch repair protein msh6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1236
Score = 303 bits (777), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 276/967 (28%), Positives = 432/967 (44%), Gaps = 135/967 (13%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P+ + +P T+ IP PS+ K ++P E+Q E+K K D ++ + G + + D
Sbjct: 315 PEDAEFNPATIY-IP-PSAW----KNFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYEND 368
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA----H 178
A + ++ + N +P L + V + V G+KV V Q E+A K
Sbjct: 369 ATIGHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFVAKGYKVARVDQMESALGKEMRERD 428
Query: 179 GPGKAGP---------FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDG 227
PG R L+ + T TL V G +D + Y V + +
Sbjct: 429 DPGAKKAKGAAKADKIIRRELACILTGGTL-----VEGSMLQDDM---ATYCVAIKESTL 480
Query: 228 NVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ 287
N N FG F V+ +TG +F D + LE + P ELLL +
Sbjct: 481 N----GNPAFGIAF--------VDAATGQFFLSQFEDDVDLTRLETFVAQTCPRELLLEK 528
Query: 288 P-LSKQTEKML---------LAYAGPASNV-RVECASRDCFIGGGALAEVMSLYENMGED 336
LS + ++L Y P + + A RD G Y + +
Sbjct: 529 ARLSTKALRILKNNTTPTTIWNYLKPGAEFPEPDAAVRDLDSSG---------YFSKAAE 579
Query: 337 TLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRS 396
+ + DQ PE A+E + L + A+ + +L+ LER + SF
Sbjct: 580 GEAGDADQEEAWPE------ALEKSRDK-SLLISAVGALVHYLRVLKLERSLLSQGSFEW 632
Query: 397 LSG---SMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLC 453
S + + L +L LE+ N+ NG GTL ++N +T +G RL R+WV HPLC
Sbjct: 633 YSPIHRNGTLILDGQSLINLEIFSNSVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLC 692
Query: 454 DRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSP 513
+ I+ RLDAV D N+D +I E QF ++S + P
Sbjct: 693 NTQKINERLDAV-------------------DMLNADRSIRE-QFSSLMSKM-------P 725
Query: 514 DIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLI 573
D++R I+RI +F+ V++ + L G + L+ RLI
Sbjct: 726 DLERLISRIHAGVCKAEDFVRVLEGFEQIDYAMSMLSAFGG----------GNGLVDRLI 775
Query: 574 LTA---SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEEL 630
+ P K A K+ DQ L++ G + + + K EL
Sbjct: 776 GSMPDLKEPLGFWKGA----FDRKKVRDQ----KLLVPEKGIEEDFDESAANIARIKREL 827
Query: 631 DSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTA 690
+L++ + L + L+F V + +E P KVP +W ++++T RY+ E+
Sbjct: 828 HALLDRQKAALKCKTLKFTDVGKEIYQVEAPKATKVPKDWRQMSATSSVKRYYFGELDEL 887
Query: 691 LDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNF 748
+ +L A E + + + F K F Y + A++ ++ LDCL LA S +
Sbjct: 888 VRELQEAEETHSQIVKDVAARFFKRFDVDYEVWIQAIRIISQLDCLICLAKASSSLGDPS 947
Query: 749 VRPVFVDDHEPVQIHICSGRHP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSC 807
RPVFVDD V + RHP +L+T+ D+F+PND L + ++TG N GKS
Sbjct: 948 CRPVFVDDERSV-LEFGELRHPCMLNTV--DDFIPNDIKLGGDEPNINLLTGANAAGKST 1004
Query: 808 YIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILR 867
+R + IMAQ+G +VPA SA L +D I +R+GA+D+I +STF EL+E IL
Sbjct: 1005 VLRMSCIAVIMAQIGCYVPARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILS 1064
Query: 868 NCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGS 927
T +SLVI+DELGRGTS++DGVA+A A L ++ H C+ F THY +A T+F G
Sbjct: 1065 EATPRSLVILDELGRGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLA---TEFEGH 1121
Query: 928 VGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
+ + ++ +D + + VT+LY++ GV+E SFG A + + I RA
Sbjct: 1122 ------PEIRARRMQIQVD-EGRRRVTFLYRLEDGVAEGSFGMHCAAMCGISGRVIERAE 1174
Query: 988 VIAAKLE 994
V A + E
Sbjct: 1175 VAAREWE 1181
>gi|392866476|gb|EAS27907.2| DNA mismatch repair protein msh6 [Coccidioides immitis RS]
Length = 1221
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 265/951 (27%), Positives = 425/951 (44%), Gaps = 116/951 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P TL P S +++P E+Q E+K K+ D ++ + G + + D
Sbjct: 313 PGHPDYDPRTLYIPPLAWS------RFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 366
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA---AIKAHG 179
A + ++ + N +P L + V GFK+ V Q+E+A ++
Sbjct: 367 ATIGHQLFDLKLTDRVNMRMVGVPESSLEYWANQFVAKGFKIARVDQSESALGKEMRERD 426
Query: 180 PGKAGP--FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCV----VDDDGNVGK 231
K G R LS + T TL V G +D S Y V V VDD
Sbjct: 427 DKKKGDKVIKRELSCVLTAGTL-----VDGAMLQDDM---STYCVAVKEALVDDLPA--- 475
Query: 232 IRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LS 290
GV V+ +TG EF D + E ++ P ELLL + +S
Sbjct: 476 -------------FGVSFVDTATGQFFLTEFTDDVDMTKFETLVAQTRPQELLLEKGFMS 522
Query: 291 KQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE 350
+ ++L P + R+ + E+ + E +S ++D PE
Sbjct: 523 PKALRILKNNTNPTTIWNYLKPEREFWDASTTRREL-----DASEYFVSVDQDNIEAWPE 577
Query: 351 QGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSA 407
R A + +L + + I++L+ +ER ++ +G + + + + L
Sbjct: 578 V--LRQARDN-----ELVISSFGALIQYLRMLKIERDLITIGNFTWYDPIRKASSLVLDG 630
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
TL LEV N+ +G + GTL ++N +T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 631 QTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRMFKQWVCHPLMDSKKINARLDAV-- 688
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
D N+D +I + QF SS LT + PD++R I+R+ T
Sbjct: 689 -----------------DALNADSSIRD-QF----SSQLTKM---PDLERLISRVHAGTC 723
Query: 528 TPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK 587
+F+ V++ + L G ++ LI +S P + G
Sbjct: 724 KCQDFVRVLEGFEQIDYTMSLLKQTGS----------GDGVIGHLI--SSMPDMDGLLQY 771
Query: 588 LLSTVNK-EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
+ ++ +A D G + + G + + + ++ + +LD L+ R++L +
Sbjct: 772 WKTAFDRVKAKDSG----IFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRRELNSSAI 827
Query: 647 EFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+ + +E+P + +P +W ++++TK+ RY+ PE+ + +L A E +
Sbjct: 828 IYRDNGKEIYQLEVPVKVRNIPKSWDQMSATKQAKRYYFPELRGLIRKLQEAQETHNQIV 887
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIH 763
+ F F Y + AAV+ A LDCL LA S + RPVFVD V +
Sbjct: 888 KEVTSRFYARFDENYQTWLAAVKITARLDCLIGLAKASTAIGYPSCRPVFVDSDRSV-LE 946
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
RHP + + D F+PND L ++TG N GKS +R IMAQ+G
Sbjct: 947 FQELRHPCMLATVGD-FIPNDVKLGGNTASINLLTGANAAGKSTVLRMTCTAVIMAQIGC 1005
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
+VP +SA L +D I +R+GA+D+I +STF EL+E IL T++SLVI+DELGRG
Sbjct: 1006 YVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEATSRSLVILDELGRG 1065
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
TS++DGVA+A A L ++ H + F THY +A +F G H S + M
Sbjct: 1066 TSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLA---AEFEG-----HPE--ISPRRMR 1115
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ D+ VT+LYK+ GV+E SFG A + +P I A V A + E
Sbjct: 1116 IHVDEEDRRVTFLYKLEDGVAEGSFGMHCASMCGIPTKVIETAEVAAKEWE 1166
>gi|225010431|ref|ZP_03700902.1| DNA mismatch repair protein MutS [Flavobacteria bacterium MS024-3C]
gi|225005260|gb|EEG43211.1| DNA mismatch repair protein MutS [Flavobacteria bacterium MS024-3C]
Length = 897
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 262/950 (27%), Positives = 441/950 (46%), Gaps = 165/950 (17%)
Query: 73 LNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI 132
L P TP KK +PL +Q +KTKYPD LL+ VG + FGEDA AA++LGI
Sbjct: 26 LKPTETP-------KKISPLMKQYNGIKTKYPDALLLFRVGDFYETFGEDAIKAARILGI 78
Query: 133 YAHLDHN----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-G 187
+N A P LN ++ +LV AG +V + Q E P +
Sbjct: 79 VLTHRNNGGDKTELAGFPHHSLNTYLPKLVKAGQRVAICDQLE-------DPKQTKTIVK 131
Query: 188 RGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGV 247
RG++ L T V +D +SN + + GF GV
Sbjct: 132 RGVTELITPG-------VAFNDDILSAKSNNFLAALHKTNK-----------GF----GV 169
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
++ISTG+ + + + ++ + +L + SP+E+L+ +P K N+
Sbjct: 170 AFLDISTGEFLCAQGTEEYI----DKLLQNFSPSEVLVSKPERK--------------NI 211
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRS-AIEGIMNMPD 366
+ + E E+ +++L+ +Q N ++ A G+ N+P
Sbjct: 212 QASFGGHWHYF----FVEDWVFQEHYAKESLN----------KQFNTKTLAGFGVENLP- 256
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
L V A + + +L + +++ + + ++ + + T++ LE+ + SN +
Sbjct: 257 LGVIAAGVALHYLSETRHDKLSHI-SRLNRIAADAYVWMDRFTIKNLELFQ--SNAPDGI 313
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+LL +++ T T G RLL+RW+ PL D+ I AR VS + E+
Sbjct: 314 SLLEVIDKTTTPMGGRLLKRWLALPLKDQKAIEARHQIVSHLQEN--------------- 358
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG--- 543
T +E +F L S+ D++R I+++ +P E + + +L G
Sbjct: 359 -----TALEQRFEQALKSI-------GDLERLISKVATTKISPREMVQLKNTLLALGPIK 406
Query: 544 --------KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE 595
K L L + E T + L +P VIGK
Sbjct: 407 SLAAASGQKALAHLAEGIDPLEPFTQSIMAC-------LAEEAPVVIGKGT--------- 450
Query: 596 AADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT 655
I+ G + + R + K+ LD+++ ++ G+ +L+ S +
Sbjct: 451 -----------TIAPGYHNALDELRDLSSAGKKHLDAMLAREMERTGISSLKIASNNVFG 499
Query: 656 HLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
+ IE+ K VP +W + + RY + E+ T ++ A EE+ + +A ++ +
Sbjct: 500 YYIEVRNTHKDKVPEDWIRKQTLVNAERYITEELKTYETKILGAQEEILSIEQALFEELV 559
Query: 714 KEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD 773
+ + Q +A LDCL + L+R +N+ P ++D + + + RHPV++
Sbjct: 560 SKAQAFIVPVQKNAHQVATLDCLCGFSILAREQNYCLP-YLD--QGCSLDLKGARHPVIE 616
Query: 774 TILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
L + +V ND L E + +ITGPNM GKS +RQ AL+ +MAQ+GSFVPASSA+
Sbjct: 617 QQLAVDEKYVANDLFLDRESQQIIMITGPNMSGKSALLRQTALVVLMAQMGSFVPASSAK 676
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
+ ++D I+TR+GASD+I QG STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++
Sbjct: 677 IGIVDKIFTRVGASDNISQGASTFMVEMNETASILNNLSERSLVLLDEIGRGTSTYDGIS 736
Query: 892 IAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
IA+A +YL +H K LF THY ++ ++ F + ++V+ K
Sbjct: 737 IAWAITEYLHQHSSKAKTLFATHYHELNEMSASFE-RIKNFNVAV------------KEL 783
Query: 951 QD-VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
+D V ++ + PG S SFG VA++A +P + +A I KLE SS
Sbjct: 784 KDTVLFIRTLSPGGSAHSFGIHVAKMAGMPNEVLQKANSILKKLEKSHSS 833
>gi|134116991|ref|XP_772722.1| hypothetical protein CNBK0960 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255340|gb|EAL18075.1| hypothetical protein CNBK0960 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1205
Score = 302 bits (774), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 270/953 (28%), Positives = 437/953 (45%), Gaps = 119/953 (12%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
++TP E+Q E+K + D +L + G + + +DA + + + +P
Sbjct: 297 EFTPFEKQFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVGVPE 356
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP-------FGRGLSALYTKATLE 200
L + + + AG KVG+V Q ETA I KAG R L+ ++T T+
Sbjct: 357 QSLEFWIAKFLGAGHKVGIVDQAETA-IGMEMRTKAGQKTGGREIVRRELARVFTNGTI- 414
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
V G + N+LV + + G+ I + G+ + STG+
Sbjct: 415 ----VDSGYLNSD-DPNHLVSIKESSGSPEGISS----------FGICIADASTGEFSIS 459
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
F D R+ LE + + P EL+ + LS T ++L N+ + F
Sbjct: 460 FFEDDVCRTRLETMFRQIRPKELIHAKGNLSVTTTRLL-------RNILPSSTAWQSFRD 512
Query: 320 GGALAEVMSLYENMGEDTLS------NNEDQNMDVPEQGNHRSAIEGIMNMPD--LAVQA 371
G EDTLS +NE + +PE I ++ D LA+++
Sbjct: 513 GKEFY--------TAEDTLSLLPSIFSNEQGQITIPE---------AITSLQDNALAMES 555
Query: 372 LALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
L + +LK L++ + +F + + L TL +EVL NN G E GTL
Sbjct: 556 LGGMLFYLKSLNLDKDLFSQRNFNIYDPIKEGKNLILDGKTLGHMEVLVNNEGGIE-GTL 614
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
++ ++ G RL + W+ PL D + I+ARLDAV ++
Sbjct: 615 AELLQRCVSPSGKRLFKVWLRSPLRDADAINARLDAVEDL-------------------- 654
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
+ P+F + + L PD++R I+RI + S+F+ V+++ K +
Sbjct: 655 ----MNHPRFSGDFTQLCKGL---PDLERLISRIHAGSVKQSDFLQVVESFSKLQKGIDN 707
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
L ID S++L S +K L+ +A + + + + + T+ +Q + ++
Sbjct: 708 L-ID-------MSESLESTGVKALLRSAPDLSGMIQHIRGMYTI-----EQNEKTIAILP 754
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM-SVSGITHL--IELPANFK 665
+ G E A V+ +EEL+ ++ +K L + F S G + I++PA+ K
Sbjct: 755 NPGADEECDAADAEVERIEEELNEILEEVKKTLKCKEAVFWHSAQGGKEIFQIQVPASVK 814
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
P W K + TK RY++PE + + Q+ A E + + + EF +
Sbjct: 815 APARWTKASGTKSHNRYYTPETIPVIRQIQEARETQAAAKKNFFKHLMDEFSKDRETWLI 874
Query: 726 AVQALAALDCLHALATLSRNKN--FVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
V+ +A LDCL +LA S + + RP FV I RHP + L +F+ N
Sbjct: 875 TVRVIAELDCLVSLAKASSDMDEPKCRPTFVSSSSAF-IDFRDLRHPSM--CLRSDFISN 931
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D L ++ ++TGPNM GKS +R A IMAQ+G +VPAS A L +D I TRMG
Sbjct: 932 DVQLGGDQPRQVLLTGPNMAGKSTLLRMTAAGVIMAQLGCYVPASEARLSPVDKIQTRMG 991
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A D++ STF EL+E S ILR +SLVI+DELGRGTST+DG+AIA A L ++ H
Sbjct: 992 AYDNMFASASTFKVELDECSRILREAGPKSLVILDELGRGTSTYDGMAIAGAVLHHIATH 1051
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
+ F THY + D F YH + H + +D + Q V +LYK++PGV
Sbjct: 1052 SLPLGFFATHYGSLTD---DF-----AYHPNIRRMH-MQTHVDDEQKQ-VVFLYKLIPGV 1101
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSD 1016
+ESS G VA++A +P + RA ++ + + + ++ NR + +V +D
Sbjct: 1102 AESSHGTHVARMAGVPLDVVLRAESVSQQFFSAFNDKLVNRRQSKMPIVAQAD 1154
>gi|322706069|gb|EFY97651.1| DNA mismatch repair protein msh6 [Metarhizium anisopliae ARSEF 23]
Length = 1222
Score = 302 bits (774), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 260/962 (27%), Positives = 425/962 (44%), Gaps = 134/962 (13%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P+ P ++ P + K++P E+Q E+K D ++ + G + +
Sbjct: 316 RAPSDPEYDPRSIYIPPMAWN------KFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYE 369
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA--- 177
DA + + N +P L+ V + + +KV V Q ET K
Sbjct: 370 NDATIGHQEFDFKMTDRVNMRMVGVPESSLDHWVNQFIAKQYKVARVDQMETNLGKEMRE 429
Query: 178 ----HGPGKAGPFGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGK 231
G R LS + T TL V GG +D CV
Sbjct: 430 RQDRSGKKADKVISRELSCVLTAGTL-----VDGGMLQDDMAA-----YCVA-------- 471
Query: 232 IRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LS 290
I+ V D G+ + +TG F D + E + + P ELL+ + LS
Sbjct: 472 IKESVVDDL--PAFGIAFADTATGRFQLSGFTDDVDLTKFETFVAQIGPRELLIEKSHLS 529
Query: 291 KQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE 350
+ ++L P + ++ ++ T + D + +
Sbjct: 530 TRALRILKNNTSPTT-----------------------IWTHLKPGTEFWDADTSRRELK 566
Query: 351 QGNHRSAIEGIMNM----------PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGS 400
GN+ + E ++ DL + A+ + +LK LER + +F S
Sbjct: 567 CGNYFTTQESEDDVWPEVLQQYKDDDLVMSAVGGLVSYLKFLLLERPLLSQGNFEKYSPI 626
Query: 401 ME---MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNL 457
+ + L TL LE+ N SNGS GTL ++N +T +G RL R+WV HPLCD
Sbjct: 627 QKNGTLVLDGQTLVNLELFSNTSNGSSEGTLFSLLNKCITPFGKRLFRQWVAHPLCDIQR 686
Query: 458 ISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQR 517
I+ RLDAV D N+D T+ E QF + L + PD++R
Sbjct: 687 INERLDAV-------------------DMLNADPTVRE-QF-------ASQLVKMPDLER 719
Query: 518 GITRIFHRTATPSEFIAVMQA---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLIL 574
I+R+ P +F+ V++ I Y LQ + L+ RL+L
Sbjct: 720 LISRVHAGACKPEDFVRVLEGFEQIEYTMSLLQAFK-------------GGNGLVDRLVL 766
Query: 575 TASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLI 634
S P + + ++ A + +L I S G + + ++ K++L+ L+
Sbjct: 767 --SMPDLEEPLTYWKTAFDRRKAREDKIL---IPSRGIEPDFDDSLNRMEEIKDQLNDLL 821
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
+ + +L R ++F V + +E P + KVP +W ++++TK R++ P++ + +L
Sbjct: 822 SEKKGELKCRTIKFTDVGKEIYQMETPKSVKVPSSWRQMSATKDVKRWYFPQLTQLVREL 881
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPV 752
A E + + R ++F Y + A++ +A LDCL +LA S + + RP
Sbjct: 882 QEAEELHSQLVREIASRLFQKFDVDYNTWLLAIKIVAQLDCLVSLAKASNSLAQPSCRPQ 941
Query: 753 FVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQV 812
FVD+ + RHP + + D+F+PND L ++ ++TG N GKS +R
Sbjct: 942 FVDEERSF-VDFEELRHPCMINTV-DDFIPNDVKLGGDQAKINLLTGANAAGKSTVLRMS 999
Query: 813 ALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQ 872
+ IMAQ+G +VPA SA L +D I +R+GA+D+I +STF EL+E IL T +
Sbjct: 1000 CVAVIMAQIGCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPR 1059
Query: 873 SLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYH 932
SLVI+DELGRGTS++DGVA+A A L ++ H C+ F THY +A T+F
Sbjct: 1060 SLVILDELGRGTSSYDGVAVAQAVLHHVATHIGCVGFFATHYHSLA---TEFENH----- 1111
Query: 933 VSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAK 992
+ + ++ +D + ++ VT+LYK+ GV+E SFG A + + I RA V A
Sbjct: 1112 -PEIRAKRMQIHVDDE-ERKVTFLYKLEDGVAEGSFGMHCAAMCGISDRVIERAEVAARD 1169
Query: 993 LE 994
E
Sbjct: 1170 WE 1171
>gi|302389749|ref|YP_003825570.1| DNA mismatch repair protein MutS [Thermosediminibacter oceani DSM
16646]
gi|302200377|gb|ADL07947.1| DNA mismatch repair protein MutS [Thermosediminibacter oceani DSM
16646]
Length = 863
Score = 302 bits (774), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 259/932 (27%), Positives = 430/932 (46%), Gaps = 146/932 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---AHLDHNFMTASIP 146
TP+ +Q E+K KY D ++ +G + F +DA +AA+ L I ++ A +P
Sbjct: 3 TPMLKQYREIKEKYKDYIVFFRLGDFYEMFFDDAHIAARELEIALTSRDPENRVPMAGVP 62
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDV 205
+ ++ +L++ G+KV + +Q E P +A G R + + T T+ ++
Sbjct: 63 YHAADQYIYKLISKGYKVVICEQVE-------DPKQAKGIVKREVVKIITPGTIT---EI 112
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
E+ ++NYLVC+ ++ + G+ A ++ TG+ + E +
Sbjct: 113 SALEEK---KNNYLVCIYRENND----------------FGIAATDLMTGEFLTTEIHCA 153
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
+ L L L P E L+ + T L N+ + D F A
Sbjct: 154 YPYQELLDELSKLEPRECLVNAGFLQDT--FLNKAVNTNFNILLTFKENDYFQAESAREL 211
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP--DLAVQALALTIRHLKQFG 383
+MS + S NE +E I P +A A +R ++
Sbjct: 212 LMSQF--------SGNE---------------LEDIFKRPFATIASGACLNYLRETQRLS 248
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
L I S R + M L + LE+ ++ +G + G+LL +++ T+T G R
Sbjct: 249 LSHI----NSIRYYERTEYMALDVTCRRNLELTQSLMDGKKQGSLLWVLDKTVTSMGGRT 304
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LR+W+ PL D I R DAV E+ Q Y++
Sbjct: 305 LRKWIEQPLIDIIKIKERQDAVEELY---------------------------QNYFLRQ 337
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
+ L D++R ++ + +A+ + + K +
Sbjct: 338 ELREQLKNLYDLERLTGKLVCGNLNARDLLAIKNTVKHFPK---------------IKEL 382
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLS-TVNKE---AADQGDLLNLMIISNGQFSEVARA 619
L K LI + ++ +LL +N + + +G II +G SEV R
Sbjct: 383 LAGCRSKLLITLYNELDLLNDVYELLEKAINDDPPISVKEGG-----IIKDGFDSEVDRL 437
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNSTK 677
RKA K + L R++ G+++L+ + IE+ AN VP ++ + +
Sbjct: 438 RKASTEGKSWIAELERKERERTGIKSLKVGYNKVFGYYIEITKANLSLVPKDYIRKQTLA 497
Query: 678 KTIRYHSPEVLTALDQLALANEE------LTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
R+ + E L + L + EE I C+ D K + + Q ++
Sbjct: 498 NGERFITEE-LKEYESLIMGAEEKLLDLEYQIFCKIREDLITK-----ITRLKKSAQVVS 551
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAE 790
LD L +LA ++ + N+V+P + E I+I GRHPV++ L D F+PNDT+++
Sbjct: 552 VLDALVSLAEVASSNNYVKPELTLNDE---INIVEGRHPVVELTLKDEMFIPNDTHINCS 608
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
IITGPNM GKS Y+RQVALI +MAQ+GSFVPA SA++ ++D I+TR+GASD++
Sbjct: 609 DSMISIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAQIGIVDRIFTRIGASDNLAS 668
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ E+ E + IL++ T +SL+I+DE+GRGTST+DG++IA+A ++Y+ ++ K LF
Sbjct: 669 GQSTFMVEMTEVANILKHATPKSLLILDEIGRGTSTYDGLSIAWAVIEYIHKNIKAKTLF 728
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY +I +K K G V + V M + +D+ +L K+VPG ++ S+G
Sbjct: 729 ATHYHEITQLK-KLKG-VKNFKV-----------MVKERGEDIIFLRKIVPGEADRSYGI 775
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+VA+LA LP S I RA I LE +R +
Sbjct: 776 EVAKLAGLPKSVILRAQEILKDLEQNDGARAR 807
>gi|7547005|gb|AAF63754.1|AF242852_1 DNA mismatch repair protein [Brassica napus]
Length = 259
Score = 302 bits (773), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 155/249 (62%), Positives = 188/249 (75%), Gaps = 11/249 (4%)
Query: 42 ATVSFSPAKRKVVS---SLFPPKTPKKPKLSPHTLNPIPTPSSQ-----TTHNKKYTPLE 93
A S ++R+V ++ P T +P L L P + T + KYTPLE
Sbjct: 11 AKTSLRSSRRRVTQEAQTISKPHTQTRPNLHRRFLQRFLEPPPEEESLPVTTSIKYTPLE 70
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVH 153
QQVVELK K+PDV+LM+EVGY++RFFGEDAE+AA+VLGIYAH+DH+FMTAS+PTFRLNVH
Sbjct: 71 QQVVELKRKHPDVILMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASVPTFRLNVH 130
Query: 154 VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG---GED 210
VR LVNAG+KVGVVKQTETAAIK+HG +AGPF RGLS LYTKATLEAAED+ G GE+
Sbjct: 131 VRGLVNAGYKVGVVKQTETAAIKSHGANRAGPFFRGLSGLYTKATLEAAEDISGGCVGEE 190
Query: 211 GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
G GG+SN+LVCVVD+ + + FDVR+GVV VEISTG+VV+GEFND F+RSG
Sbjct: 191 GFGGQSNFLVCVVDERVDRESNKGCGLEASFDVRVGVVGVEISTGEVVHGEFNDNFMRSG 250
Query: 271 LEAVLLSLS 279
LEAV+LSLS
Sbjct: 251 LEAVILSLS 259
>gi|340618416|ref|YP_004736869.1| DNA mismatch repair protein MutS [Zobellia galactanivorans]
gi|339733213|emb|CAZ96588.1| DNA mismatch repair protein MutS [Zobellia galactanivorans]
Length = 873
Score = 302 bits (773), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 270/960 (28%), Positives = 445/960 (46%), Gaps = 150/960 (15%)
Query: 81 SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN- 139
SQ T KK TPL +Q +KTKYPD LL+ VG + FGEDA A+K+LGI +N
Sbjct: 4 SQKT--KKVTPLMKQYNAIKTKYPDALLLFRVGDFYETFGEDAVRASKILGIILTHRNNG 61
Query: 140 ---FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTK 196
A P LN ++ +LV AG +V + Q E + RG++ L T
Sbjct: 62 GDRTELAGFPHHSLNTYLPKLVKAGERVAICDQLEDPKMTK------TIVKRGVTELVTP 115
Query: 197 ATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
V +D +SN +C V FG LGV V+ISTG+
Sbjct: 116 G-------VAMNDDILSAKSNNFLCAVH------------FGRKL---LGVSFVDISTGE 153
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDC 316
+ E + ++ +L + +P E+L+ K+ +K L G +
Sbjct: 154 FLTSEGTE----EQIDKLLQNFAPNEVLV----PKKYKKEFLEVFGNQFHT--------- 196
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALT 375
E + ++TL+N+ + S ++G ++ + A +
Sbjct: 197 -----FYMEDWVFQNDYAQETLTNHFNT-----------STLKGFGVDHLGHGIIASGVV 240
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
+ +L + ++ + S + ++ + + T++ LE+ +S TLL I++ T
Sbjct: 241 LHYLSETQHRQLQHIN-SLKRIAEEEHIWMDRFTIKNLELY--HSTNQNAVTLLSIIDKT 297
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
L+ G R+L+RW+ PL + I+ R VS + HD ++
Sbjct: 298 LSPMGGRMLKRWLALPLKNTEKINRRHQVVSYL---------------HDHDDT------ 336
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDG 553
L + + + D++R I+++ P E + + ++ + KQL D
Sbjct: 337 ------LLKIQQRIKQMGDLERLISKVATGKVNPKEIVQLKNSLEAIIPIKQLTAQSNDE 390
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ + S LH+ + R K+ +N+EA + I++G
Sbjct: 391 ALQ--LISDQLHACDMLR--------------NKIKEMINEEAPVH--IPKGKTIADGYS 432
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWA 671
E+ R S K+ LD ++ ++ G+ +L+ S + + IE+ K VP W
Sbjct: 433 DELDELRGLAFSGKDYLDKMLARESERTGITSLKIASNNVFGYYIEVRNTHKDKVPEEWI 492
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY + E+ ++ A E + + + + + Y A Q Q +A
Sbjct: 493 RKQTLVNAERYITEELKEYESKILGAEERILSLEQQLFSQLVVWAQEYIAPVQNNAQQIA 552
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHA 789
LDCL A L++ N+ +PV D E I+I +GRHPV++ L + ++ ND L+
Sbjct: 553 QLDCLCGFAQLAKENNYAKPVINDTTE---INIKNGRHPVIEKQLPLGEAYIANDVTLNR 609
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA +AE+ +D I+TR+GASD+I
Sbjct: 610 DEQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAEAAEIGYVDKIFTRVGASDNIS 669
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMV 908
G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL EH +
Sbjct: 670 MGESTFMVEMNETASILNNLSERSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPARAKT 729
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ ++ T F + Y+VS + +V +L K+ G SE SF
Sbjct: 730 LFATHYHELNEMATTFE-RIKNYNVSV-----------KELKDNVLFLRKLTEGGSEHSF 777
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVS 1028
G VA++A +P I +A I KLE SS +L+D+ Q AQ+ M +S
Sbjct: 778 GIHVAKMAGMPSQVIRKANKILKKLEKSHSSE------------ELTDKLQSAQDEMQLS 825
>gi|281206806|gb|EFA80990.1| Muts-like protein [Polysphondylium pallidum PN500]
Length = 1231
Score = 302 bits (773), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 256/984 (26%), Positives = 447/984 (45%), Gaps = 141/984 (14%)
Query: 65 KPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAE 124
+P P TL IP+ T +TP E+Q ++K+K D ++ + G + + +DA+
Sbjct: 334 EPNYDPSTLY-IPS-----TFLVNFTPFERQYWDIKSKNYDKIVFFKKGKFYELYEDDAD 387
Query: 125 MAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAI-------KA 177
+ ++ + N +P ++ + AG+++ V Q E+ K
Sbjct: 388 LGHQLFDLKMTDRVNMRMVGVPEKSFQQWAKKFLEAGYRITKVDQVESRLAMDKRQNQKG 447
Query: 178 HGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNG 235
K R ++++ T TL +D SNYL+ + +DD
Sbjct: 448 ASTSKETIIQREVTSILTIGTL--------VDDSLLLDSTSNYLMSIKEDD--------- 490
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT-- 293
+ LG+ ++ S G EF D RS LE +LL P E+L + QT
Sbjct: 491 -----YKQELGICFLDSSVGLFYLTEFKDDENRSHLETLLLQTMPKEILYDKSSISQTTL 545
Query: 294 ---------EKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQ 344
EK +L P E S D +G L E D L
Sbjct: 546 NVIKRVLSREKYILTTRQPT-----EFWSTDFTLG--------KLEEMQKADDLKKVLGD 592
Query: 345 NMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT 404
N++V E A+ G ++ + + + KQ E + +L G+ +
Sbjct: 593 NIEV-EHSLLGYALGGCC----CYLEDIKMADQVTKQARFEM-------YNTLDGTSSLV 640
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L +L LE+ N ++GS G+L +++ T +G RLL++WV PL R I+ RLDA
Sbjct: 641 LDGQSLVNLEIFANTTDGSTNGSLFKVLDRCSTPFGKRLLKQWVCRPLSSREKINERLDA 700
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
V + +G++ E ++S + T L R PD++R ++RI
Sbjct: 701 V-------------QYLGENQE--------------LMSKLSTMLTRVPDLERMLSRIKA 733
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
++ + + V+ + + L++L E + S TL + +GK
Sbjct: 734 CSSKIGDLVTVLNVLERCQQCLEELDCVDE----INSPTLQYHV------------TVGK 777
Query: 585 AAKLLSTVNKEAADQGDLLNLMII-SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
L T+ ++ + +I S G F+E ++ +++ ++EL+ + +K
Sbjct: 778 GFPNLKTLISSMRSSFEINVVQLIPSKGLFTEYDECQERIKAIEQELEQHLKDQKKLFSS 837
Query: 644 RNLEFMSVSGITHLIELPANF------KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
++ + S+ + +E+P + K+ K K+ RY +P + + QLA
Sbjct: 838 NSIAYKSIGKEIYQLEIPIDVYNKHKAKMGDYIYKSELKSKSKRYWTPFIEKKVKQLAEE 897
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFV--RP-VFV 754
N+ + + + ++F + + A +LA +DC+ +LA +S RP + +
Sbjct: 898 NDSFSALQKVVEVRIQEQFNVNASAWCQATASLAQIDCILSLAKVSHLAGITTCRPEIVI 957
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY-CQIITGPNMGGKSCYIRQVA 813
DH + RHP + D+F+PND L +++ ++TGPNMGGKS +RQ
Sbjct: 958 SDHALLDAK--EMRHPAITLKGGDDFIPNDITLGIDQQPGVMVLTGPNMGGKSTLLRQCC 1015
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
++ IMAQ+G +VPA+S L ++D I+TR+GA+D+I G+STF+ EL E S +L+ T +S
Sbjct: 1016 ILVIMAQLGCYVPAASCRLSIVDRIFTRLGANDNIMAGQSTFMLELQETSNVLKYATKRS 1075
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHV 933
LVI+DELGRGTST DG +IA++ LDY+ CM +F THY +A + K ++ H+
Sbjct: 1076 LVIMDELGRGTSTFDGYSIAFSVLDYISNKINCMCIFATHYQSLAH-EPKVAKAIQKSHM 1134
Query: 934 SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
S ++ V +LYK+ GV +S+G V +A +P I++A A +
Sbjct: 1135 SCYVDD---------VEKKVIFLYKLTEGVCPASYGMLVGGMAGIPSEVIAKAEEKAEQF 1185
Query: 994 EAE--VSSRVQNRSAKRDLLVKLS 1015
E E VS+ V ++ ++++ K++
Sbjct: 1186 EKESTVSTYVHGTTSTKEIVKKIT 1209
>gi|400602832|gb|EJP70430.1| MutS domain V [Beauveria bassiana ARSEF 2860]
Length = 1206
Score = 302 bits (773), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 271/955 (28%), Positives = 440/955 (46%), Gaps = 104/955 (10%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P P T+ P S K++P E+Q E+K D ++ + G + +
Sbjct: 300 REPGDPDYDPRTIYIPPLAWS------KFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYE 353
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
DA + + N +P L+ V + + +KV V Q ET
Sbjct: 354 NDATIGHQEFDFKMTDRVNMRMVGVPESVLDHWVNQFIAKQYKVARVDQMETN------- 406
Query: 181 GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDD--GNVGKIRNGV 236
G+ + K T + A+ V + C + LV ++ DD + I+ V
Sbjct: 407 -----LGKEMRERQDK-TGKKADKVISRQLACVLTAGTLVDGSMLQDDMAAHCVAIKESV 460
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
DG G+ V+ +TG +F D + E + + P E+LL + LS + +
Sbjct: 461 V-DGLPA-FGIAFVDTATGHFFLTDFIDDVDLTKFETFIAQIGPREMLLEKSHLSTKANR 518
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
+L P + + + E+ + + S + PE
Sbjct: 519 ILKNNTSPTTIWTYLKPDVEFWDADTCRRELNAA------NYFSTEKGSEGSWPEALEKE 572
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME----MTLSANTLQ 411
+ +M+ AV AL +R LK LER + ++F SL ++ + L TL
Sbjct: 573 KDNDRVMS----AVGALIWYLRFLK---LERPLLSQSNF-SLYNPIQKNGTLILDGQTLI 624
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
LE+ N+ NG GTL ++N +T +G RL R+WV HPL + + I+ RLDAV
Sbjct: 625 NLEIFSNSVNGGSEGTLFQLLNKCITPFGKRLFRQWVAHPLQNIDRINERLDAV------ 678
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
D N D ++ E QF + L + PD++R I+RI + P +
Sbjct: 679 -------------DMLNKDPSVRE-QFS-------SQLVKMPDLERLISRIHACSCKPED 717
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHS-ALLKRLILTASSPAVIGKAAKLLS 590
F+ V++ +Q+ EY + S S LL RLI ++ P + A +
Sbjct: 718 FVRVLEG-------FEQI----EYTMTLVSAFKGSNGLLDRLI--SAMPDLEEPLAYWRN 764
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
++ A Q +L I G + + + +++ K +L L+ + +L ++L+F
Sbjct: 765 AFDRPKAKQDKIL---IPERGIEEDFDASLERIETIKSQLQELLADKKVELKCKSLKFTD 821
Query: 651 VSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
V + IE P KVP +W +++STK R++ E+ + +L A E + + R
Sbjct: 822 VGKEIYQIEAPKATKVPSSWRQMSSTKDVKRWYFSELTALVRELQEAEETHSQLVRDVAA 881
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIHICSGR 768
F K+F Y + +A+Q +A LDCL +LA +L + RP FVD + + R
Sbjct: 882 RFCKKFDVDYELWLSAIQVIAQLDCLVSLAKASLCLGEPSCRPQFVDQDRSL-VEFEELR 940
Query: 769 HPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
HP + + D F+PND L E+ ++TG N GKS +R + IMAQ+G +VPA
Sbjct: 941 HPCMLSTNGD-FIPNDIKLGGEQANINLLTGANAAGKSTVLRMSCIAVIMAQIGCYVPAI 999
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SA+L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++D
Sbjct: 1000 SAKLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYD 1059
Query: 889 GVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
GVA+A A L ++ H C+ F THY IA T+F + + ++ +D +
Sbjct: 1060 GVAVAQAVLHHVATHIGCVGFFATHYHSIA---TEFENH------PEIRARRMQIHVDDQ 1110
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++ +T+LYK+ GV+E SFG A + + S I RA V A E E +SR+++
Sbjct: 1111 -ERRITFLYKLEDGVAEGSFGMHCAAMCGISNSVIERAEVAAK--EWEHTSRLKD 1162
>gi|242786643|ref|XP_002480846.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
gi|218720993|gb|EED20412.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1183
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 260/959 (27%), Positives = 434/959 (45%), Gaps = 127/959 (13%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P + IP P + T K++P E+Q E+K K+ D ++ + G + + D
Sbjct: 272 PGHPDYDPRNIY-IP-PLAWT----KFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEND 325
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK------ 176
A + ++ + N +P L+ + V G+K+ V Q+E+A K
Sbjct: 326 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGYKIARVDQSESALGKEMRERD 385
Query: 177 ----AHGPGKAGPFGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVG 230
A G + R LS + T TL V G +D S Y V + +
Sbjct: 386 DKKSAKGSKEDKIIKRELSCVLTAGTL-----VEGSMLQDDM---STYCVAIKE------ 431
Query: 231 KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PL 289
+ DG G+ V+ +TG EF D + E + P ELLL + +
Sbjct: 432 -----IILDGLPA-FGIAFVDTATGQFYLSEFKDDADMTKFETFIAQTRPQELLLEKSAV 485
Query: 290 SKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVP 349
S++ ++L GP + ++ + A+ E+ + D + E N+D
Sbjct: 486 SQKAMRILKNNTGPTTLWNHLKPGKEFWEADIAIRELDA------SDYFVSQESDNIDAW 539
Query: 350 EQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLS 406
Q R A E + A+ A +++L+ L+R ++ +G + + + + L
Sbjct: 540 PQV-LREAREK-----ENAMSAFGALVQYLRVLKLDRDLISIGNFTWYDPIRKATSLVLD 593
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TL LE+ N+ +G GTL ++N +T +G R+ ++WV HPL D + I+AR DAV
Sbjct: 594 GQTLINLEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDIDKINARFDAV- 652
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
D N+D TI + QF SS LT + PD++R I+RI
Sbjct: 653 ------------------DALNADSTIRD-QF----SSQLTKM---PDLERLISRIHAGA 686
Query: 527 ATPSEFIAVMQA---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIG 583
+F+ V++ I Y L L GE L+ +L+ +S P ++
Sbjct: 687 CKAQDFLRVLEGFEQIEYTMSLLNDLG-SGE------------GLIGKLV--SSMPDLVS 731
Query: 584 KAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+ ++ A + +L + G + ++ ++ +L++L+ R++LG
Sbjct: 732 PLEYWKTAFDRLKAKENGIL---VPEQGIEEDFDASQATIEQIHRDLENLLKKSRRELGS 788
Query: 644 RNLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
+ + + +E+P K VP +W ++++TK+ RY+ PE+ + +L A E +
Sbjct: 789 TAICYRDNGKEIYQLEVPIKVKNVPKSWDQMSATKQVKRYYFPELRALVRKLQEAQESHS 848
Query: 703 IVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPV 760
+ + F F Y + +++ +A LDCL +LA S + + RPVFVD+ V
Sbjct: 849 QIVKEVAGRFYARFDENYETWLKSIRIVAQLDCLISLAKASSSLGEPSCRPVFVDNDRSV 908
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
I RHP + + D F+PND L +R ++TG N GKS +R + IMAQ
Sbjct: 909 -IEFEELRHPCMLQNVTD-FIPNDVQLGGKRASINLLTGANAAGKSTILRMTCVAVIMAQ 966
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G ++P SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DEL
Sbjct: 967 IGCYIPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPKSLVILDEL 1026
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTS++DGVA+A A L ++ H + F THY +A + +H
Sbjct: 1027 GRGTSSYDGVAVAQAVLHHIATHVGALGFFATHYHSLA---------------AEFENHP 1071
Query: 941 VMGPMDSK-----SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ P + ++ V +LYK+ GV+E SFG A + +P I A A + E
Sbjct: 1072 EICPKRMRIHVDDEERRVIFLYKLEDGVAEGSFGMHCASMCGIPNKVIENAEHAAKQWE 1130
>gi|330507603|ref|YP_004384031.1| DNA mismatch repair protein MutS [Methanosaeta concilii GP6]
gi|328928411|gb|AEB68213.1| DNA mismatch repair protein MutS [Methanosaeta concilii GP6]
Length = 877
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 267/943 (28%), Positives = 437/943 (46%), Gaps = 144/943 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA------HLDHNFM 141
K +PL +Q + K YPD LL+ VG + F +DA + A+ L I
Sbjct: 5 KLSPLMEQYYQNKKLYPDALLLFRVGDFYETFADDAVIVARDLNITLTSRQKDDQGEKIP 64
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A +P L+ ++ RL+ AG KV + Q E + G R ++ + T T+
Sbjct: 65 LAGVPYHSLDAYLARLIRAGHKVAICDQVEDPKLAR------GLVKRAITRVVTPGTI-- 116
Query: 202 AEDVGGGEDGCGGES--NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
E ES N+L +V D NVG + V++STG+ +
Sbjct: 117 ------IEPSMLDESSNNFLAAIVKGDENVG----------------LAFVDVSTGEFLT 154
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
E L S L PAE L A++ ++ CF
Sbjct: 155 TEVPHNRLYSELA----RFRPAECLS-------------AFSLHWEGTSLQILEEPCFSA 197
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
A A +L + G D + + + +G + A +++ + + L + HL
Sbjct: 198 ERAEA---ALADRYGPDW-----KERLRLEGRGLSQRACGAVLSYLNASRFDL---LGHL 246
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
K + SGS M L T++ LE+ RN + S GTLL ++ T T
Sbjct: 247 KDVQI------------YSGSDYMVLDEVTVRNLEITRNIRDRSRRGTLLEFLDQTRTAM 294
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G+R L RW+ PL I+ RLD V E+A +R
Sbjct: 295 GARTLARWLQMPLQSEQAIARRLDGVEELASKSLLHR----------------------- 331
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
S+ L + D++R ++RI ++A+P E ++V+++ L +LQ++ +D +
Sbjct: 332 ----SLAEELKGTSDLERLLSRISCKSASPKE-LSVLKSTLEMLPRLQEILMDDQ--SSA 384
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
S L L RL ++I ++ ++ D G +I G E+ +
Sbjct: 385 QSSYLQD-LSSRLSPLDDIVSLIERS--IMEDPPVHVRDGG------VIREGYDPEIDQL 435
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKVNSTK 677
R+ ++ + + L +++ G+++L+ + + IE+ AN VP N+ + +
Sbjct: 436 RELLRDGRGWISRLEGSEKERTGIKSLKIAFNNVFGYYIEVSRANLHLVPQNYIRKQTLA 495
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE-FQAAVQALAALDCL 736
R+ +PE L ++ L+ +E ++ +++ A Q ALA LD L
Sbjct: 496 NGERFVTPE-LKDMESRVLSAQERSVSLEQELFYKVRDLVASKAGVIQERATALAELDVL 554
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQI 796
+LAT ++ N +RP F ++ +I I S RHPVLD + FVPND L +R I
Sbjct: 555 ISLATSAKENNMIRPEF---NQEGRISIRSSRHPVLDKAMRGAFVPNDVLLDTDRNRLII 611
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
+TGPNM GKS ++RQ+AL IMAQ GSFVPA+ A L ++D ++TR+GA D + G+STF+
Sbjct: 612 LTGPNMAGKSTFMRQIALTAIMAQTGSFVPAAYASLSLVDQVFTRVGAYDDLSAGQSTFM 671
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
E+ E ++IL + T +SLV++DE+GRGTST DG+++A+A +YL E KC +F THY +
Sbjct: 672 VEMTEIAHILTSATRKSLVLLDEVGRGTSTFDGLSLAWAISEYLHESIKCKSVFATHYHQ 731
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ-DVTYLYKVVPGVSESSFGFKVAQL 975
+ D+++ +G V Y ++ K D+ +T+L VVPG ++ S+G VA+L
Sbjct: 732 LTDLESILSG-VRNYSIAV------------KEDKGTITFLRTVVPGATDKSYGVHVARL 778
Query: 976 AQLPPSCISRATVIAAKLEAEV------SSRVQNRSAKRDLLV 1012
A +P + RA I ++E E R Q RS++ L+
Sbjct: 779 AGVPRTVTKRADQILREIEKEALMQPGSGGRSQRRSSRYTQLI 821
>gi|168214981|ref|ZP_02640606.1| DNA mismatch repair protein MutS [Clostridium perfringens CPE str.
F4969]
gi|170713592|gb|EDT25774.1| DNA mismatch repair protein MutS [Clostridium perfringens CPE str.
F4969]
Length = 909
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 284/980 (28%), Positives = 455/980 (46%), Gaps = 152/980 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 2 KLTPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPM 61
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
IP N ++ RLV G+KV + +Q E + A G K YT ++
Sbjct: 62 CGIPFHASNSYIGRLVAKGYKVAICEQVEDPKV-AKGIVKRDVIKVITPGTYTDSSF--V 118
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YG 260
E+ ++NY++ + D RN R + +ISTGD + G
Sbjct: 119 EET---------KNNYIMTIYSDLE-----RN---------RCSLAITDISTGDFLATEG 155
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E G + + +P E++L L ++ K + PA SR
Sbjct: 156 ELEKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR------ 198
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ + +E E+ L N E+ N S M + AL I +
Sbjct: 199 ----KPIEYFEEKFEEVL------NAQFGEKSNSLSL------MVKKSSNALVKYILDTQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + SL M + LS+ + LE+ N S+ G+LL +++ T T G
Sbjct: 243 KISLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMG 298
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SR+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 299 SRMLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY- 344
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
DI+R + +I ++ A + IA+ +I GK K
Sbjct: 345 -------------DIERILGKISNKNANAKDLIALKTSI---GKIPNV---------KGI 379
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEV 616
+ S+LLK + +LL KE GDL I +G SE+
Sbjct: 380 IENCTSSLLKNYHHNLDD---LRDIYELLEKSIKEDPSLTLKDGDL-----IKDGFNSEI 431
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPL-NWA 671
R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+ +P +
Sbjct: 432 DELRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYSSIPEGRYI 489
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYYAEFQAAVQ 728
+ + R+ +PE+ ++L A+E+L C +D FL E + + +
Sbjct: 490 RKQTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHIDRLKTTAK 546
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNL 787
+A LDC+ LA ++ +F++P +D E I +GRHPV++ ++ F+PNDT +
Sbjct: 547 IIAELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGEFIPNDTII 603
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ + IITGPNM GKS Y+RQV++I +M Q+GSFVPAS A + V+D I+TR+GASD
Sbjct: 604 NKDDNQLLIITGPNMAGKSTYMRQVSIITLMCQIGSFVPASKANISVVDKIFTRIGASDD 663
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--K 905
+ G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y+ ++K +
Sbjct: 664 LAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLR 723
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
C LF THY ++ ++ + G V Y V+ + D ++ +L K++ G ++
Sbjct: 724 CKTLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLRKIIEGGAD 771
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENM 1025
S+G +VA+LA +P I+RA I KLE E S + + K + K +E +
Sbjct: 772 QSYGIEVAKLAGIPDEVINRAKEILEKLEMESSKDNLDLALKEVNVSKEDIEEASITTSY 831
Query: 1026 PVSPESFYLGRVEASEDLIS 1045
V R+E E++IS
Sbjct: 832 EVKETIVEEDRIEIKEEVIS 851
>gi|18310137|ref|NP_562071.1| DNA mismatch repair protein MutS [Clostridium perfringens str. 13]
gi|44888232|sp|Q8XL87.1|MUTS_CLOPE RecName: Full=DNA mismatch repair protein MutS
gi|18144816|dbj|BAB80861.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
Length = 909
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 277/941 (29%), Positives = 440/941 (46%), Gaps = 168/941 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 2 KLTPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPM 61
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
IP N ++ RLV G+KV + +Q E + A G K YT ++
Sbjct: 62 CGIPFHASNSYIGRLVAKGYKVAICEQVEDPKV-AKGIVKRDVIKVITPGTYTDSSF--V 118
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YG 260
E+ ++NY++ + D RN R + +ISTGD + G
Sbjct: 119 EET---------KNNYIMTIYSDLE-----RN---------RCSLAITDISTGDFLATEG 155
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E G + + +P E++L L ++ K + PA SR
Sbjct: 156 ELEKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR------ 198
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ + +E E+ L N E+ N S M + AL I +
Sbjct: 199 ----KPIEYFEEKFEEVL------NAQFGEKSNSLSL------MVKKSSNALVKYILDTQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + SL M + LS+ + LE+ N S+ G+LL +++ T T G
Sbjct: 243 KISLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMG 298
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SR+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 299 SRMLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY- 344
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
DI+R + +I ++ A + IA+ +I GK I E T
Sbjct: 345 -------------DIERILGKISNKNANAKDLIALKTSI---GKIPNVKGI----IENCT 384
Query: 561 SKTLHS------------ALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
S L + LL++ I P++ K GDL I
Sbjct: 385 SSLLRNYHHNLDDLRDIYELLEKSI--KEDPSLTLK--------------DGDL-----I 423
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK 665
+G SE+ R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+
Sbjct: 424 KDGFNSEIDELRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYS 481
Query: 666 -VPL-NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYY 720
+P + + + R+ +PE+ ++L A+E+L C +D FL E +
Sbjct: 482 SIPEGRYIRKQTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHI 538
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDN 779
+ + +A LDC+ LA ++ +F++P +D E I +GRHPV++ ++
Sbjct: 539 DRLKTTAKIIAELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGE 595
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
F+PNDT ++ + IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + V+D I+
Sbjct: 596 FIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIF 655
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR+GASD + G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y
Sbjct: 656 TRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEY 715
Query: 900 LLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLY 957
+ ++K +C LF THY ++ ++ + G V Y V+ + D ++ +L
Sbjct: 716 ICKNKNLRCKTLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLR 763
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
K++ G ++ S+G +VA+LA +P I+RA I KLE E S
Sbjct: 764 KIIEGGADQSYGIEVAKLAGIPDDVINRAKEILEKLEMESS 804
>gi|376261287|ref|YP_005148007.1| DNA mismatch repair protein MutS [Clostridium sp. BNL1100]
gi|373945281|gb|AEY66202.1| DNA mismatch repair protein MutS [Clostridium sp. BNL1100]
Length = 873
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 267/943 (28%), Positives = 451/943 (47%), Gaps = 151/943 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +++K +Y D +L +G + F DAE+A++ L I L+
Sbjct: 5 TPMMQQYLDIKEQYKDCILFFRLGDFYEMFFSDAELASRELEITLTGRDCGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + +V RLV+ G+KV + +Q E A+ G R + + T T+ D
Sbjct: 65 VPFHAADNYVARLVSKGYKVAICEQVEDPALAK------GIVKRDVIKVVTPGTVT---D 115
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ ++NYL+ + +NG F G+ AV+I+TGD
Sbjct: 116 ITMLDER---KNNYLMSIY---------KNGNF-------YGLGAVDITTGDFYATRITW 156
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
G R L + P+E+++ L+ E L + N V F G A+
Sbjct: 157 GNTRGKLFDEIAKYLPSEIIVNTELNGDNE--LTSEIKQKFNTYVSTFEETSFEYGNAI- 213
Query: 325 EVMSLYENMGEDTLSNN-EDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL---K 380
DTL N E++ +++ E D+AV A +++L +
Sbjct: 214 -----------DTLKNQFENKALNIQEY--------------DIAVNASGALLKYLESTQ 248
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I +F S + M L A++ + LE+ S+ G+LL +++ T+T G
Sbjct: 249 KVNLSHIQ----NFNSYALEEYMILDASSRRNLELTETMREKSKKGSLLWVLDKTMTSMG 304
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLR+W+ PL + IS RL+AV E+ KN + VE +
Sbjct: 305 GRLLRKWIEQPLINHGDISLRLNAVEEL------------------KNKFMARVEAR--- 343
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQL---HIDGE 554
L R DI+R + ++ + + IA+ M I Y L +I
Sbjct: 344 ------ELLKRVYDIERLMGKVILGSVNCRDLIALKNSMCQIPYIKNLLDGFETEYIKNC 397
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
Y + + + + + + +I P V K ++ +G S
Sbjct: 398 YHQLDSLEDVCNLIDISII---DDPPVTIKEGGII-------------------KDGYNS 435
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF--KVPLNW 670
EV + R A K+ + +L R++ G++NL+ F V G + IE+ ++ VP +
Sbjct: 436 EVDKLRMASIQGKDWIAALEASEREKTGIKNLKVGFNRVFG--YYIEVTKSYFSLVPEEY 493
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + RY +PE+ D + A E++ + + + + + ++ +AL
Sbjct: 494 IRKQTLANCERYITPELKEIEDNILGAEEKIVQLEYSLFVQIKDKIAEQLSRIKSTARAL 553
Query: 731 AALDCLHALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLH 788
A +D L +LA ++ + + +P V V D +I I GRHPV++ + FVPNDT L
Sbjct: 554 AEIDVLASLAEVADREGYCKPDVSVSD----KIEIVDGRHPVVEKMTDKSGFVPNDTVLD 609
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E + IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA+SA++ ++D I+TR+GASD +
Sbjct: 610 MEEDRLAIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAASAKIGLVDRIFTRVGASDDL 669
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL--EHKKC 906
G+STF+ E++E + IL N T +SL+++DE+GRGTST DG++IA+A ++Y++ E C
Sbjct: 670 ASGQSTFMVEMSEVANILINATKRSLLVLDEIGRGTSTFDGLSIAWAVIEYIVSKEQLGC 729
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ +++ K G + Y ++ + K D DV +L K++ G ++
Sbjct: 730 RTLFATHYHELTELEGKLPG-IKNYCIT----------VKEKGD-DVIFLRKIIRGGADG 777
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQNRSAKR 1008
S+G +VA+LA +P + I RA I A L +A+++ + R K+
Sbjct: 778 SYGIQVAKLAGVPHAVIDRAKEILANLDDADINRNGKVRRLKK 820
>gi|168211840|ref|ZP_02637465.1| DNA mismatch repair protein MutS [Clostridium perfringens B str. ATCC
3626]
gi|170710211|gb|EDT22393.1| DNA mismatch repair protein MutS [Clostridium perfringens B str. ATCC
3626]
Length = 895
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 290/1003 (28%), Positives = 461/1003 (45%), Gaps = 160/1003 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 2 KLTPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPM 61
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
IP N ++ RLV G+KV + +Q E + A G K YT ++
Sbjct: 62 CGIPFHASNSYIGRLVAKGYKVAICEQVEDPKV-AKGIVKRDVIKVITPGTYTDSSF--V 118
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YG 260
E+ ++NY++ + D RN R + +ISTGD + G
Sbjct: 119 EET---------KNNYIMTIYSDLE-----RN---------RCSLAITDISTGDFLATEG 155
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E G + + +P E++L L ++ K + PA SR
Sbjct: 156 ELEKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR------ 198
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ + +E E+ L N E+ N S M + AL I +
Sbjct: 199 ----KPIEYFEEKFEEVL------NAQFGEKSNSLSL------MIKKSSNALVKYILDTQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + SL M + LS+ + LE+ N S+ G+LL +++ T T G
Sbjct: 243 KISLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMG 298
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SR+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 299 SRMLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY- 344
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
DI+R + +I ++ A + IA+ +I GK K
Sbjct: 345 -------------DIERILGKISNKNANAKDLIALKTSI---GKIPNV---------KGI 379
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEV 616
+ S+LLK + +LL KE GDL I +G SE+
Sbjct: 380 IENCTSSLLKNYHHNLDD---LRDIYELLEKSIKEDPSLTLKDGDL-----IKDGFNSEI 431
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPL-NWA 671
R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+ +P +
Sbjct: 432 DELRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYSSIPEGRYI 489
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYYAEFQAAVQ 728
+ + R+ +PE+ ++L A+E+L C +D FL E + + +
Sbjct: 490 RKQTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHIDRLKTTAK 546
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNL 787
+A LDC+ LA ++ +F++P +D E I +GRHPV++ ++ F+PNDT +
Sbjct: 547 IIAELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGEFIPNDTII 603
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ + IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + ++D I+TR+GASD
Sbjct: 604 NKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISIVDKIFTRIGASDD 663
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--K 905
+ G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y+ ++K +
Sbjct: 664 LAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLR 723
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
C LF THY ++ ++ + G V Y V+ + D ++ +L K++ G ++
Sbjct: 724 CKTLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLRKIIEGGAD 771
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENM 1025
S+G +VA+LA +P I+RA I LE E S DL +K + +E E
Sbjct: 772 QSYGIEVAKLAGIPDEVINRAKEILETLEMESS------KDNLDLALKEVNASKEDIEEA 825
Query: 1026 PVSPESFYLGRVEASEDLISAYRDLFLNLKF-ATHDDNPAKSF 1067
++ S+ + ED I D + L F A DN K
Sbjct: 826 SITT-SYEVKETLVEEDKIEIKEDDQIQLDFSAIGKDNLIKEL 867
>gi|71018553|ref|XP_759507.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
gi|46098995|gb|EAK84228.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
Length = 1716
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 270/942 (28%), Positives = 430/942 (45%), Gaps = 103/942 (10%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K +TP E+Q E+K + D +L + G + + EDA + + + +P
Sbjct: 382 KDFTPFERQFWEIKQNHWDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVP 441
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFG------RGLSALYTKATLE 200
++ + + G+KVG V QTETA K G+ G R L + T T+
Sbjct: 442 EASFDIFAAKFLALGYKVGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIV 501
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
A + + NY V + + G RNG GV ++ +T +
Sbjct: 502 DAASLPDDLN------NYCVSI-KESATTG--RNGPI-------FGVCTLDAATAEFNLT 545
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
EF D R+ LE +L SL E+L + L+ T ++L + + + + +
Sbjct: 546 EFEDDESRTRLETLLRSLRLKEVLHEKGGLTAPTLRVLRSTVPSTAQITMLKPGLEFLEP 605
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L ++ +L+ D + ++D + I +++ P A+ AL + +L
Sbjct: 606 ETTLRKLNALF---NPDVDAEARLDSLDAVDPSLLPEGIASMVHRP-CAMSALGGMLCYL 661
Query: 380 KQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
Q L+R +C +F L + L A +L L VL+N+ G++ GTL ++N +
Sbjct: 662 AQLNLDRDLCSSRNFNIFDPLHQDKCLVLDAQSLTHLNVLQND-EGTDEGTLHRLLNRCV 720
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T +G RL + W+ PL + I+AR DAV ++ + P
Sbjct: 721 TPFGKRLFKIWLVAPLATADAINARQDAVEDL------------------------LKNP 756
Query: 497 QFYYILSSVLTSLGRS-PDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
F + G++ PDI+R + R+ P +F AV++++ + K ++QL E
Sbjct: 757 CF----GDQFETFGKALPDIERIVPRVRAGKCRPRDFTAVLKSLGHFEKAIKQLRNQCEG 812
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
S + LLK S PAV A +L S+ + + G + G F
Sbjct: 813 ----FSTDVMDGLLK------SVPAVSAIARELQSSF--KVTEDGSFTPI----EGAFEL 856
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL-------IELPANFKVPL 668
RA A+ + +L+ I RKQL + ++ HL IE+P KVP
Sbjct: 857 YDRAEAAIAEVEAQLEHEIESYRKQLKLNPVK----CAWKHLGTKDIFQIEVPVATKVPS 912
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
NW K++ TK R++SP+V + ++ A E + S F F AV+
Sbjct: 913 NWTKLSGTKDRNRWYSPKVRDLVQEIKEARETRLATLKQFHQSLFASFSEQSDVFLRAVK 972
Query: 729 ALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
+A +DCL +LA S + RP V +E I RHP + +D F+PND
Sbjct: 973 TIAEIDCLLSLAKASYAIGEPSCRPELVH-NETALIEFEELRHPCIAGDNVD-FIPNDIR 1030
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L + + I+TG NM GKS R A I+AQ+G VPA SA L +D I +RMGA+D
Sbjct: 1031 LGGKNDEVVILTGGNMAGKSTTARTCATAVILAQLGCRVPALSARLSPVDRIASRMGAND 1090
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
I STF+ E+ EAS I+ CT +SLVI+DELGRGTST DG AIA+A L +L+ +C
Sbjct: 1091 QIFGNNSTFMVEMLEASRIINECTPRSLVIMDELGRGTSTFDGQAIAFAVLHHLVSRTRC 1150
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
+ F+THY +A ++ V H+ L D K ++V + Y+++ G++ES
Sbjct: 1151 LAFFLTHYTNLAYDFDSYS-RVSNKHMQVLVD-------DDK--REVIFTYRLIDGIAES 1200
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKL--EAEVSSRVQNRSA 1006
S+G +VA LA +P RA V++ + + S +N+SA
Sbjct: 1201 SYGTQVAALAGVPHEICDRAAVVSKQFADATKASQSEKNKSA 1242
>gi|348574694|ref|XP_003473125.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
[Cavia porcellus]
Length = 1354
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 273/1009 (27%), Positives = 451/1009 (44%), Gaps = 145/1009 (14%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P P TL +P + TP ++ ++K++ D+++ +VG + +
Sbjct: 382 RRPDHPDFDPSTLY-VPEDFLNSC-----TPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 435
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK---- 176
DA + LG+ + N+ + P + LV G+KV V+QTET +
Sbjct: 436 MDALVGVSELGL-VFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARC 494
Query: 177 ---AHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
AH R + + TK T + G D S YL+ + + + + G +R
Sbjct: 495 RKMAHISKYDKVVRREICRIITKGTQTYSVLEG---DPSENYSKYLLSLKEKEDSSGHVR 551
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQ 292
GV V+ S G G+F+D S ++ P ++L + LS +
Sbjct: 552 ----------LYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSVE 601
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGED---TLSNNEDQNMDVP 349
T+ +L G S+ + ++ I G + + E+ T NED + +P
Sbjct: 602 TKTIL---KGTLSS-----SLQEGLIPGSQFWDAAKTLRTLLEEGYFTEKLNEDTGVMLP 653
Query: 350 EQGNHRSAIEGIMNMPD-----------LAVQALALTIRHLKQFGLERIMCLGASFRSL- 397
S ++G+ + D LA+ AL + +LK+ +++ + A+F
Sbjct: 654 ------SVLKGMTSESDSIGLTPGENSELALSALGGCVFYLKKCLIDQELLSMANFEEYI 707
Query: 398 ----------------SGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ M L A TL LE+ N +NGS GTLL ++ T +G
Sbjct: 708 PLDSDMVSVRPGAIFTKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCYTPFGK 767
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PLC I+ RLDAV ++ + +K S+VT +
Sbjct: 768 RLLKQWLCAPLCSPFAINDRLDAVEDLMDV-------------PDKISEVTDL------- 807
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATP--SEFIAVMQAILYAGKQLQQLHI-------D 552
L + PD++R +++I H +P S+ +AI+Y + I +
Sbjct: 808 -------LKKLPDLERLLSKI-HNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALE 859
Query: 553 G--------EYREKVTSKTLHSALLKRLI-LTASSPAVIGKAAKLLSTVNKEAA----DQ 599
G E E+V S +LK+++ L +P G+ L + +N+ ++
Sbjct: 860 GFKVMCKIIEIMEEVVD-GFKSKILKQVVTLQIKNPE--GRFPDLTTELNRWDTAFDHEK 916
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIE 659
L+ G S+ +A ++ ++ L ++ R ++G R + + + + +E
Sbjct: 917 ARRTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRIGCRTIVYWGIGRNRYQLE 976
Query: 660 LPANFKV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF 716
+P NF + P + ++ K RY + + L L A E + + F
Sbjct: 977 IPENFTIHNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNF 1036
Query: 717 GGYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVFV--DDHEPVQIHICSGRHPVL 772
Y ++Q AV+ +A LD L LA S+ + RP + +H P + + RHP +
Sbjct: 1037 DKNYKDWQCAVECIAVLDVLLCLANYSQGGDGPMCRPALLLPGEHNPPFLELRGSRHPCI 1096
Query: 773 -DTILLDNFVPNDTNLHAE------REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
T D+F+PND + E R YC ++TGPNMGGKS IRQ L+ +MAQ+G +V
Sbjct: 1097 TKTFFGDDFIPNDILIGCEEQQEDGRAYCVLVTGPNMGGKSTLIRQAGLLAVMAQMGCYV 1156
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PA L +D ++TR+GASD I G STF EL+E + ILR+ TA SLV+VDELGRGT+
Sbjct: 1157 PAEMCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDELGRGTA 1216
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPM 945
T DG AIA A + L E +C LF THY + + +K +V H++ + ++ P
Sbjct: 1217 TFDGTAIASAVVKELAETIRCRTLFSTHYHSLVEDYSKNV-AVRLGHMACMVENECEDP- 1274
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
S + +T+LYK V G S+GF A+LA LP I + A + E
Sbjct: 1275 ---SQETITFLYKFVQGACPKSYGFNAARLAHLPEEVIQKGHRKAREFE 1320
>gi|290968595|ref|ZP_06560133.1| DNA mismatch repair protein MutS [Megasphaera genomosp. type_1 str.
28L]
gi|290781248|gb|EFD93838.1| DNA mismatch repair protein MutS [Megasphaera genomosp. type_1 str.
28L]
Length = 866
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 261/937 (27%), Positives = 421/937 (44%), Gaps = 138/937 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMT 142
K TP+ +Q +E+K + D +L +G + F EDA E+ + G
Sbjct: 6 KLTPMMKQYMEVKERCRDKILFFRLGDFYEMFFEDALTVSRELDLTLTGRAGGNKEKVPM 65
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P + ++ RLV G+KV V +Q E P A G R + + T T+
Sbjct: 66 CGVPFHSADTYIERLVQKGYKVAVCEQME-------DPKAAKGIVKREIIKVITPGTITM 118
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V ++ NYL C+ +V V +++TG+ +
Sbjct: 119 EHAVAAKQN------NYLACMTASAASVS----------------FVLADVTTGECWWQV 156
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ S + ++ +P ELLLG + Q + +R R+ G
Sbjct: 157 CDTDGWESIVGDMVSVYAPRELLLGSLTAAQKD-----------GIRKILQQRE---GNC 202
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
L E + ++D G +E +M A L L + ++
Sbjct: 203 VLTE--------------PDIRTDVDYEAVGTQYFTVE-MMAAAKAASYCLGLLLSYVT- 246
Query: 382 FGLERIMCLGASFRSLS---GSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
E + C + F +L + L A L LE+ RN +G GTLL +++HT T
Sbjct: 247 ---EVMKCDISYFHTLEPLQQEQRLVLDAACLHHLEITRNVRDGGRKGTLLAVLDHTCTA 303
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLLR+W+ PL I R + V+E+ QH DVT + +
Sbjct: 304 MGGRLLRKWLETPLLSGTQIMRRQEGVAELV-------------QHSVLRKDVTDILEKI 350
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA--ILYAGKQ-LQQLHIDGEY 555
Y D +R +TRI T +P +++A+ ++ +L KQ LQQ+
Sbjct: 351 Y--------------DFERILTRIETGTVSPKDYVALRESLGVLPTLKQALQQVT----- 391
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
S +L+ LI + + LL KE Q + N +I G SE
Sbjct: 392 ----------SPILRDLIAAVHTH---DEVYDLLCRSIKEVPGQV-IRNGGVIREGFSSE 437
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPANFKVPLNWAKVN 674
+ R+ ++KE L L R++ G++ + + V G I VP + +
Sbjct: 438 LDEIRRIGANSKEFLQELEAKERERTGIKMKIGYTKVFGYYFEISHANTKPVPEYYIRKQ 497
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY +P + ++ A E + + A + + + + Q +ALA LD
Sbjct: 498 TLVNAERYITPALKEFEVKVLTAQERMLALEYALYGEVRQRIQTHIHDMQETARALAQLD 557
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREY 793
CLH+LA ++ ++RP + QI I GRHP+++ + + FVPND L+ +
Sbjct: 558 CLHSLAVAAQENRYIRPQLNGER---QIRIVDGRHPIMEHYVKNALFVPNDVVLNHDTHE 614
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS Y+RQVA++ +M Q+GSF+PA A + +D I+TR+GA+D I G+S
Sbjct: 615 ILIITGPNMAGKSTYMRQVAVLVLMTQIGSFIPAREASICPVDRIFTRIGATDDILTGQS 674
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ E S+IL+ T SL+I+DE+GRGTST DG++IA A ++Y L+ + LF TH
Sbjct: 675 TFMMEMEEVSHILQYATQNSLLILDEIGRGTSTFDGMSIARAVIEYCLKKVHALTLFATH 734
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ D+ T + + Y V+ + +D+T+L +++PG ++ S+G VA
Sbjct: 735 YHELTDMST-MSKKIKNYTVAV-----------KERGRDITFLRRIIPGGADRSYGLHVA 782
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSRVQ-NRSAKRD 1009
+LA LP + RA VI +LE Q + S KRD
Sbjct: 783 RLAGLPEGLLKRAEVILQELETAEHRPCQVSPSEKRD 819
>gi|58260898|ref|XP_567859.1| mismatch repair-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229940|gb|AAW46342.1| mismatch repair-related protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 1205
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 269/953 (28%), Positives = 436/953 (45%), Gaps = 119/953 (12%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
++TP E+Q E+K + D +L + G + + +DA + + + +P
Sbjct: 297 EFTPFEKQFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVGVPE 356
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP-------FGRGLSALYTKATLE 200
L + + + AG KVG+V Q ETA I KAG R L+ ++T T+
Sbjct: 357 QSLEFWIAKFLGAGHKVGIVDQAETA-IGMEMRTKAGQKTGGREIVRRELARVFTNGTI- 414
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
V G + N+LV + + G+ I + G+ + STG+
Sbjct: 415 ----VDSGYLNSD-DPNHLVSIKESSGSPEGISS----------FGICIADASTGEFSIS 459
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
F D R+ LE + + P EL+ + LS T ++L N+ + F
Sbjct: 460 FFEDDVCRTRLETMFRQIRPKELIHAKGNLSVTTTRLL-------RNILPSSTAWQSFRD 512
Query: 320 GGALAEVMSLYENMGEDTLS------NNEDQNMDVPEQGNHRSAIEGIMNMPD--LAVQA 371
G EDTL+ +NE +PE I ++ D LA+++
Sbjct: 513 GKEFY--------TAEDTLNLLPSIFSNEQGQTTIPE---------AITSLQDNALAMES 555
Query: 372 LALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
L + +LK L++ + +F + + L TL +EVL NN G E GTL
Sbjct: 556 LGGMLFYLKSLNLDKDLFSQRNFNIYDPIKEGKNLILDGKTLGHMEVLVNNEGGIE-GTL 614
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
++ ++ G RL + W+ PL D + I+ARLDAV ++
Sbjct: 615 AELLQRCVSPSGKRLFKVWLRSPLRDADAINARLDAVEDL-------------------- 654
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
+ P+F + + L PD++R I+RI + S+F+ V+++ K +
Sbjct: 655 ----MNHPRFSGDFTQLCKGL---PDLERLISRIHAGSVKQSDFLQVVESFSKLQKGIDN 707
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
L ID S++L S +K L+ +A + + + + + T+ +Q + ++
Sbjct: 708 L-ID-------MSESLESTGVKALLRSAPDLSGMIQHIRGMYTI-----EQNEKTIAILP 754
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM-SVSGITHL--IELPANFK 665
+ G E A V+ +EEL+ ++ +K L + F S G + I++PA+ K
Sbjct: 755 NPGADEECDAADAEVERIEEELNEILEEVKKTLKCKEAVFWHSAQGGKEIFQIQVPASVK 814
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
P W K + TK RY++PE + + Q+ A E + + + EF +
Sbjct: 815 APARWTKASGTKSHNRYYTPETIPVIRQIQEARETQAAAKKNFFKHLMDEFSKDRETWLI 874
Query: 726 AVQALAALDCLHALATLSRNKN--FVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
V+ +A LDCL +LA S + + RP FV I RHP + L +F+ N
Sbjct: 875 TVRVIAELDCLVSLAKASSDMDEPKCRPTFVSSSSAF-IDFRDLRHPSM--CLRSDFISN 931
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D L ++ ++TGPNM GKS +R A IMAQ+G +VPAS A L +D I TRMG
Sbjct: 932 DVQLGGDQPRQVLLTGPNMAGKSTLLRMTAAGVIMAQLGCYVPASEARLSPVDKIQTRMG 991
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A D++ STF EL+E S ILR +SLVI+DELGRGTST+DG+AIA A L ++ H
Sbjct: 992 AYDNMFASASTFKVELDECSRILREAGPKSLVILDELGRGTSTYDGMAIAGAVLHHIATH 1051
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
+ F THY + D F YH + H + +D + Q V +LYK++PGV
Sbjct: 1052 SLPLGFFATHYGSLTD---DF-----AYHPNIRRMH-MQTHVDDEQKQ-VVFLYKLIPGV 1101
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSD 1016
+ESS G VA++A +P + RA ++ + + + ++ NR + +V +D
Sbjct: 1102 AESSHGTHVARMAGVPLDVVLRAESVSQQFFSAFNDKLVNRRQSKMPIVAQAD 1154
>gi|149369766|ref|ZP_01889618.1| DNA mismatch repair protein [unidentified eubacterium SCB49]
gi|149357193|gb|EDM45748.1| DNA mismatch repair protein [unidentified eubacterium SCB49]
Length = 900
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 267/943 (28%), Positives = 440/943 (46%), Gaps = 163/943 (17%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMT 142
KK TPL +Q +K KYPD LL+ VG + FG DA AA +L I +N
Sbjct: 24 KKVTPLMKQYNAIKAKYPDALLLFRVGDFYETFGADAVKAAGILNITLTARNNGGEQTEL 83
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A P LN ++ +LV AG +V + Q E + RG++ L T
Sbjct: 84 AGFPHHSLNTYLPKLVMAGCRVAICDQLEDPKMTK------TIVKRGVTELVTPG----- 132
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
V +D +SN + V + G G + R+GV ++ISTG+ + E
Sbjct: 133 --VALNDDILQSKSNNFLAAVHFGPSTGS------GTQKNQRIGVAFLDISTGEFLTSEG 184
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
N ++ + +L + +P+E+L SKQ K+ G D F
Sbjct: 185 NAEYI----DKLLQNFNPSEVLF----SKQKRKLFSETFG------------DNF----- 219
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
V L ED + + + + +Q N ++LK F
Sbjct: 220 --HVFHL-----EDWVFQKDYTDETLNKQFN----------------------TKNLKGF 250
Query: 383 GLER----IMCLGASFRSLSGSME-----------------MTLSANTLQQLEVLRNNSN 421
G++ I+ GA+ LS + + + T++ LE+ +S+
Sbjct: 251 GIDHLEQGIIASGAALHYLSETQHNKLEHITRIARIAEDEFVWMDRFTIRNLELY--HSS 308
Query: 422 GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESV 481
TLL +++ T++ G R+L+RW+ PL + I+ R + VS Y E+
Sbjct: 309 NQNAVTLLDVIDKTISPMGGRMLKRWMALPLKNVETITRRHEVVS--------YLLQEN- 359
Query: 482 GQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY 541
+L + T++ R D++R I+++ +P E I + + L
Sbjct: 360 ------------------QVLDKIKTNIKRIGDLERLISKVATGKISPREVIQLKNS-LE 400
Query: 542 AGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
A ++++ E E + K L S L + +L K+ +T+++EA +
Sbjct: 401 AVVPVKKI---SETSENESLKILGSQLQECEVLRN----------KIKATIHEEAP--VN 445
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
++ I++G E+ R KE LD ++ ++ G+ +L+ S + + IE+
Sbjct: 446 IVKGNAIASGFHPELDELRAIATGGKEYLDKMLARETERTGITSLKIASNNVFGYYIEVR 505
Query: 662 ANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
K VP W + + RY + E+ ++ A E++ + + + ++ +
Sbjct: 506 NTHKDKVPTEWVRKQTLVNAERYITEELKEYEAKILGAEEKIGALEQEIFVKLIQWMIQF 565
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
Q + +A LDCL + AT + + N+VRP+F E + I GRHPV++ L +
Sbjct: 566 IGPVQQNAKLIAELDCLGSFATQAADANYVRPLF---DETTDLDIKEGRHPVIEKQLPPD 622
Query: 780 --FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
F+ ND L E + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA + + V+D
Sbjct: 623 APFISNDVFLDREHQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAGALRMGVVDK 682
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GASD+I G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A
Sbjct: 683 IFTRVGASDNISMGESTFMVEMNETASILNNISERSLVLLDEIGRGTSTYDGISIAWAIS 742
Query: 898 DYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
+YL EH VLF THY +I ++ F+ + Y+VS + + DV +L
Sbjct: 743 EYLHEHPSHAKVLFATHYHEINEMTETFS-RIKNYNVSV-----------KELEDDVLFL 790
Query: 957 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
K+VPG S+ SFG VA++A +P + ++RA I +LE SS
Sbjct: 791 RKLVPGGSQHSFGIHVAKMAGMPQAVLNRANKILKRLEKSHSS 833
>gi|167630634|ref|YP_001681133.1| DNA mismatch repair protein muts [Heliobacterium modesticaldum Ice1]
gi|167593374|gb|ABZ85122.1| DNA mismatch repair protein muts [Heliobacterium modesticaldum Ice1]
Length = 910
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 274/942 (29%), Positives = 436/942 (46%), Gaps = 153/942 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFM 141
K TP+ +Q E+K ++PD +L +G + FG DA +A++ L G A L+
Sbjct: 2 KAVTPMMKQYQEIKNRHPDAILFFRLGDFYEMFGPDALLASRELEITLTGREAGLEERIP 61
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
+P ++ RLV G+KV + +Q E A G R + + T TL
Sbjct: 62 MCGVPYHSAQGYISRLVEKGYKVAICEQVEDPA------AAKGIVKREIVRVVTPGTLM- 114
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
D E+ +NYLV V D + G+ A+++ TGD +
Sbjct: 115 --DTNVLEEKS---NNYLVAVAH------------IADEW----GLAALDVFTGDFMAAR 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ D L L+A LL L+P ELL+ Y A+N
Sbjct: 154 WYDCDL-VALQAELLRLAPKELLV--------------YPAVAAN--------------- 183
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL----------AVQA 371
E+ ++ G +S+ +++ V EQ + I+G N+ L A+ A
Sbjct: 184 -FPELTDGWKKQG-ILVSSYPAEDLTV-EQAT--TVIKGQFNLSSLEAFGCAHWPAAIVA 238
Query: 372 LALTIRHLK---QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
A+ +R+++ + L I L R+ M L T + LE+ R GS G+L
Sbjct: 239 AAINLRYVQDTQKANLPHITRL----RTYRTDHFMRLDPATRRNLELTRTMREGSRKGSL 294
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
L +++ T+T G RL++RW+ PL D I R V+ + + G R G
Sbjct: 295 LGVIDKTVTAMGGRLIKRWIEQPLTDVEAICKRQAVVAALVDD-GLLRQDVRAG------ 347
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
L +V D++R ++ + +A + IA+ ++ L +
Sbjct: 348 -------------LRAVY-------DLERLAGKVAYGSANGRDLIALASSLEALPTVLDK 387
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
L EK+ S+ + A +P L+ D G +I
Sbjct: 388 LRQGPSVLEKLASR-----------IDALTPVARRITETLVDDPPVSVRDGG------LI 430
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANF- 664
+G EV RK S KE L + R++ G+R+L+ F V G + IE+ AN
Sbjct: 431 RSGFHPEVDELRKIAGSGKEWLAHIEQRERERTGIRSLKVGFNKVFG--YFIEVSKANMT 488
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP ++ + + RY +PE+ T +++ A E+LT + + + Q
Sbjct: 489 SVPADYIRRQTLANGERYITPELKTYEEKILGAEEKLTQLEYRLFTELRSSIEALLPQLQ 548
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPN 783
+ +A LD ALA ++ + +V P D H+ +IHI GRHPV++ L FVPN
Sbjct: 549 KTAEQVAHLDVFAALAQVAVEQGYVCP---DIHDGTEIHIQGGRHPVVEAHLGPGVFVPN 605
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT + E +ITGPNM GKS Y+RQVALI ++AQVGSFVPA++A + V+D I+TR+G
Sbjct: 606 DTRF-CDGETLLLITGPNMAGKSTYMRQVALIVLLAQVGSFVPATAAAIGVVDRIFTRVG 664
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASD + G+STF+ E+ E ++IL + T++SLV++DE+GRGTST DG+AIA+A + ++
Sbjct: 665 ASDDLATGQSTFMVEMTEVAHILHHATSRSLVVLDEVGRGTSTFDGMAIAWAVAE-AIQR 723
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
LF THY ++ ++ G V Y ++ +S D+ +L+++ PG
Sbjct: 724 LGAKSLFATHYHELVRLEETLPG-VRCYTIAV-----------RESGDDIVFLHQIRPGG 771
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRS 1005
S+G +VA+LA LP S I RA I A LE+E R + ++
Sbjct: 772 VNKSYGIQVARLAGLPSSVILRAREILANLESESKKRPEQKA 813
>gi|378726093|gb|EHY52552.1| DNA mismatch repair protein MSH6 [Exophiala dermatitidis NIH/UT8656]
Length = 1250
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 257/959 (26%), Positives = 419/959 (43%), Gaps = 118/959 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P TL IP P + T K++P E+Q E+K K D ++ + G + + D
Sbjct: 306 PGHPDYDPRTLY-IP-PMAWT----KFSPFEKQYWEIKQKLWDTIVFFKKGKFYELYEND 359
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK-AHGPG 181
A + ++ + N +P L + + V GFKV V Q ETA K
Sbjct: 360 ATIGHQLFDLKLTDRVNMRMVGVPESSLEMWANQFVAKGFKVARVDQQETALGKNMRERD 419
Query: 182 KAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNY-LVCVVDDDGNVGKIRNGVFGDG 240
+ +G + L G DG + + CV + + +
Sbjct: 420 EKSNMKKGKEDKVIRRELACVLTAGTLVDGTMLQDDMSTYCVAIKESEIDNM-------- 471
Query: 241 FDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLA 299
GV V+ +TG +F D + E + P E+LL + +S +T ++L
Sbjct: 472 --PAFGVAFVDTATGQFHISQFVDDSDLTRFETFVAQTRPQEILLEKGEVSMKTLRILKN 529
Query: 300 YAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE---QGNHRS 356
GP + ++ + G E+ + ++ MD PE Q +
Sbjct: 530 NTGPTTIWNYLKPGKEFWEGHITAKEIEA------------SDYFPMDWPEVLQQAREK- 576
Query: 357 AIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQL 413
DL + AL I +L+ +ER ++ LG + + + + L TL L
Sbjct: 577 ---------DLLMSALGALICYLRTLNIERELVTLGNFTWYDPIRKATSLVLDGQTLINL 627
Query: 414 EVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMG 473
EV N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 628 EVFANSYDGGIEGTLFQLLNRCITPFGKRMFKQWVCHPLMDTKKINARLDAV-------- 679
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFI 533
D N D T V +F +S +T L PD++R I+R+ + +F+
Sbjct: 680 -----------DSLNRD-TKVRDRF----TSQMTKL---PDLERLISRVHAGSCKVQDFV 720
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN 593
V++ + L DG+ + S+++ L+ + P + + +
Sbjct: 721 KVLEGFEQIDHTMSLLR-DGDAGSNLDSESVIGQLITAM------PDLQPHLKYWMDAFD 773
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+ A + +L G + ++ + + ++E + L++ RK+ G + +
Sbjct: 774 RTKAKETGILE---PERGIEEDFDNSKDTIDAIQDEFNVLLHKWRKEFGSSGICYRDSGK 830
Query: 654 ITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+E+P K +P NW ++++TK+ RY+ PE+ + + +L A E + + + F
Sbjct: 831 EIMQLEVPLKVKGIPKNWDQMSATKQVKRYYFPELRSLVRKLQEAQETHSQIVKEVAGRF 890
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPV---------- 760
F Y + AA++ +A LDCL +LA S + + RP F+DD +
Sbjct: 891 FARFDEKYEIWLAAIRIIAQLDCLISLAKASSSLGYPSCRPEFIDDDQDAASTRLGPSRS 950
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
+ + RHP L +D+F+PND L ++TG N GKS +R + IMAQ
Sbjct: 951 TLELVELRHPCL-LAKVDDFIPNDVVLGGTGANLSLLTGANAAGKSTVLRMTCIAVIMAQ 1009
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G ++P SA L D I +R+GA D I +STF EL E IL T +SLVI+DEL
Sbjct: 1010 IGCYLPCLSARLTPFDRIMSRLGAQDHIFAAQSTFFVELAETKKILSEATPRSLVILDEL 1069
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTS+HDGVA+A A L +L H C+ F THY ++ +F G H
Sbjct: 1070 GRGTSSHDGVAVAQAVLHHLASHVGCLGFFATHYHSLS---AEFKG------------HP 1114
Query: 941 VMGPMDSK-----SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ P K + VT+LYK+ GV+E SFG A + +P + RA A + E
Sbjct: 1115 EIEPQRMKILVDDEQRRVTFLYKLERGVAEGSFGMHCASMCGIPARVVDRAQEAAREWE 1173
>gi|321263883|ref|XP_003196659.1| DNA mismatch repair-related protein [Cryptococcus gattii WM276]
gi|317463136|gb|ADV24872.1| DNA mismatch repair-related protein, putative [Cryptococcus gattii
WM276]
Length = 1210
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 268/935 (28%), Positives = 428/935 (45%), Gaps = 107/935 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
++TP E+Q E+K + D +L + G + + +DA + + + +P
Sbjct: 302 EFTPFEKQFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVGVPE 361
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETA---AIKAHGPGKAGP---FGRGLSALYTKATLEA 201
L + + + AG KVG+V Q ETA ++ K G R L+ ++T T+
Sbjct: 362 QSLEFWIAKFLGAGHKVGIVDQAETAIGMEMRTKAGQKTGGREIVRRELARVFTNGTI-- 419
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V GG YL DD ++ I+ G G+ + STG+
Sbjct: 420 ---VDGG---------YLNS--DDPNHLVSIKESSGGPEGTSSFGICIADASTGEFSISY 465
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
F D R+ LE + + P EL+ + LS T ++L N+ + F G
Sbjct: 466 FEDDVCRTRLETMFRQIRPKELIHAKGNLSVTTTRLL-------RNILPSSTAWQSFKDG 518
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD--LAVQALALTIRH 378
N+ S ED++ +PE I ++ D LA+++L + +
Sbjct: 519 KEFYTAEDTL-NLLPSIFSAEEDEST-IPE---------AITSLQDNALAMESLGGMLFY 567
Query: 379 LKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
LK L++ + +F + + L TL +EVL NN G E GTL ++
Sbjct: 568 LKSLNLDKDLFSQRNFNIYDPIKEGKNLILDGKTLGHMEVLVNNEGGIE-GTLAELLQRC 626
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
++ G RL + W+ PL D + I+ARLDAV ++ +
Sbjct: 627 VSPSGKRLFKIWLRSPLRDADGINARLDAVEDL------------------------MNH 662
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
P+F + + L PD++R I+RI + S+F+ V+++ K + L +D
Sbjct: 663 PRFSGDFTQLCKGL---PDLERLISRIHAGSVKQSDFLQVVESFSKLQKGIDNL-VD--- 715
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN-GQFS 614
S++L S +K L+ +A P + G + E ++ + I+ N G
Sbjct: 716 ----MSESLESTGVKALLRSA--PDLSGMIEHIRGMYTIEQNEK----TIAILPNPGADE 765
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM-SVSGITHL--IELPANFKVPLNWA 671
E A V+ +EEL+ ++ +K L + F S G + I++PA+ K P W
Sbjct: 766 ECDAADAEVERIEEELNEILEEVKKTLKCKEAVFWHSAQGGKEIFQIQIPASVKAPARWT 825
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
K + TK RY++PE + + Q+ A E + + ++EF + V+ +A
Sbjct: 826 KASGTKSHNRYYTPETIPVIRQIQEAREIQAAAKKNFFKHLMEEFSKDRETWLTTVRVIA 885
Query: 732 ALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHA 789
LDCL +LA S + + RP FV I RHP + L +F+ ND L
Sbjct: 886 ELDCLVSLAKASSDLDEPKCRPTFVSSSSAF-IDFRDLRHPSM--CLRSDFISNDVQLGG 942
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
++ ++TGPNM GKS +R A IMAQ+G +VPAS A L +D I TRMGA D++
Sbjct: 943 DQPRQVLLTGPNMAGKSTLLRMTAAGVIMAQLGCYVPASEARLSPVDKIQTRMGAYDNMF 1002
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
STF EL+E S ILR +SLVI+DELGRGTST+DG+AIA A L +L H +
Sbjct: 1003 ASASTFKVELDECSRILREAGPKSLVILDELGRGTSTYDGMAIAGAVLHHLATHSLPLGF 1062
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY + D F YH + H + +D + Q V +LYK++PGV+ESS G
Sbjct: 1063 FATHYGSLTD---DF-----AYHPNIRRMH-MQTHVDDEQKQ-VVFLYKLIPGVAESSHG 1112
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNR 1004
VA++A +P + RA ++ + + + ++ NR
Sbjct: 1113 THVARMAGVPLDVVLRAESVSQQFFSAFNEKLVNR 1147
>gi|388579806|gb|EIM20126.1| DNA mismatch repair protein Msh6 [Wallemia sebi CBS 633.66]
Length = 1017
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 279/1043 (26%), Positives = 466/1043 (44%), Gaps = 137/1043 (13%)
Query: 14 APKSNQTTASSSASSPRPP---QQTPPPKIAATVSFSPAKRKVVSSLF----PPKTPKK- 65
APK A+ +++ R P ++ K V + A +K S F PP +
Sbjct: 38 APKETPAKAARPSAAGRTPSGGNKSLLTKAERQVQQTKAAKKDAESPFMFLHPPYDKYQN 97
Query: 66 ----PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGE 121
P PHTL+ P + K+++P E+Q E+K + D +L + G + +
Sbjct: 98 PIGHPDYDPHTLHIPPK------YWKEFSPFEKQFWEIKADHFDTILFFQKGKFYELYEN 151
Query: 122 DAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAA------- 174
DA + + + +P + + + G+KVG V+Q ETA
Sbjct: 152 DAIIGHREFDLKLTERVRMCMVGVPEMSFDFFAAKFLALGYKVGKVEQRETAIGMDMRQR 211
Query: 175 --IKAHGPGKAGP-----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDG 227
K G KAG R L ++ T TL + + +++ V + +
Sbjct: 212 ADKKPAGGAKAGKSDDKLVRRELRSVLTNGTLVDPKMLADEA------ASHCVSIKETSS 265
Query: 228 NVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ 287
++ +G G+ ++ STG+ F D RS LE ++ L P E++ +
Sbjct: 266 SI---------NGNKPTFGLCILDASTGEFNLATFEDDKSRSKLETLIRQLRPKEIVHEK 316
Query: 288 PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQN-M 346
+++ L +++ S + G E ++ +N+ +NED + +
Sbjct: 317 ---GNLDQLTLRVLRNITSISCLWTSLNSGKEGMDAIETITELKNLFN---KDNEDADKV 370
Query: 347 DVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME---M 403
+P+ AIE ++ + A+++L + +L+ L+R + +F + E M
Sbjct: 371 KLPD------AIESLIENTE-AIESLGNLMWYLRSLNLDRDLLSLGNFNIYDATREGQAM 423
Query: 404 TLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLD 463
L TL +EVL N S G E TLL ++N T +G RL R W+ PL I+ RL+
Sbjct: 424 ILDGRTLAHIEVLVN-SEGGEDDTLLKLLNRCTTPFGKRLFRIWLCTPLRSSKAINERLN 482
Query: 464 AVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIF 523
AV ++ + G F S + L PD++R ++RI
Sbjct: 483 AVDDVISNTG------------------------FTQEFDSNVKGL---PDLERLLSRIH 515
Query: 524 HRTATPSEFIAVMQAILYAGKQLQQLHIDG-EYREKVTSKTLHS-ALLKRLILTASSPAV 581
+ P +F+ V++A + ++L + E++ + TL S L+ I S
Sbjct: 516 AMSVRPKQFLQVLEAFNRLQQVFEKLEEEASEFKSQSLKATLRSIPDLREYISNIES--- 572
Query: 582 IGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQL 641
K T N + ++ +G A+K + ++ELD ++ +++
Sbjct: 573 -----KFDLTEN----------DTLMPCDGADEAYEDAKKLNEDLEQELDEILERYKREF 617
Query: 642 GMRNLEFMSV-SGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
++ + + V + + IE+P VP NWAK++ST+K RY SPEV + ++ A E
Sbjct: 618 KIKTISYKDVGTKEIYSIEMPKKTSVPANWAKLSSTQKVDRYWSPEVRQLVQKVKEARET 677
Query: 701 LTIVCRAAWDSFLKE----FGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFV 754
+A + F K+ F Y + AAV+A A +DC+++LA S N + RP +
Sbjct: 678 RA----SALNDFAKKLYAAFDEDYKTWIAAVKACAEIDCINSLAKSSINMEEPRCRPTII 733
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
+ E + I RHP + L +FV ND L E ++TGPNM GKS +R A
Sbjct: 734 EADEAI-IDFDQLRHPSM--ALRRDFVANDVKLGGNDEGTMLLTGPNMAGKSTLLRMTAA 790
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
IMAQ+G +VPA SA + +D I +R+GA D++ STF+ EL E S I+ T +SL
Sbjct: 791 AVIMAQIGCYVPAQSATIAPVDRIASRLGAYDNMFSNSSTFMVELAETSKIVNETTPKSL 850
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVS 934
+I+DELGRGTST G+AIA A L ++ C LF THY + D G+ H +
Sbjct: 851 LILDELGRGTSTTQGIAIASAVLQHIASFLGC-CLFSTHYSSLGDF--------GSTHPN 901
Query: 935 YLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
H M + +++ +LYK+V GV+ S+G VA+LA +P + RA +A +
Sbjct: 902 IKACH--MASEVNSEKREIRFLYKLVEGVALDSYGHHVAKLAGVPLPVVVRAEQVATEYT 959
Query: 995 AEVSSRVQNRSAKRDLLVKLSDQ 1017
+ AKR + L+ Q
Sbjct: 960 EANKLEQEKAEAKRHKTIPLAAQ 982
>gi|325289888|ref|YP_004266069.1| DNA mismatch repair protein MutS [Syntrophobotulus glycolicus DSM
8271]
gi|324965289|gb|ADY56068.1| DNA mismatch repair protein MutS [Syntrophobotulus glycolicus DSM
8271]
Length = 853
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 258/949 (27%), Positives = 440/949 (46%), Gaps = 156/949 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP+ +Q +K K PD +L +G + F +DA AA VL I + IP
Sbjct: 4 TPMLKQYESIKAKVPDCILFFRLGDFYEMFADDALTAAPVLEIALTSREGGSGSRIPMCG 63
Query: 150 LNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+ H +++L+ AGFKV + +QTE P ++ G R + + + T++
Sbjct: 64 VPHHSAENYIQKLIAAGFKVAICEQTE-------DPQQSKGIVKRDIVRIVSPGTVDTV- 115
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
++NYL + + G+ ++++TGD + F
Sbjct: 116 -------AAEHKNNYLAAIYKEKD-----------------WGLAYLDLTTGD--FRLFQ 149
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ L L ++PAE++L + + K L Y A A + F
Sbjct: 150 TPSQQTLLNE-LNRINPAEIILPKEFAVSMSKALDGYYSNA-------ADKTIFSSLAGF 201
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM--NMPDLAVQALALTIRHLKQ 381
E Y + E +P A+ + N+PD ++Q +
Sbjct: 202 RERFHNYTGLLEQ-----------MPVSARAAGALWNYIKKNIPDSSLQNVI-------- 242
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+S S M L T + LE++ ++ G E GT+ ++N T T +G+
Sbjct: 243 -----------ELKSCRQSEVMVLDRWTRKNLELVESSRFGDERGTIFDVLNLTKTAFGA 291
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R+LR W+ PL ++ I ARLD V E+ ++ T + +
Sbjct: 292 RMLRHWIQQPLLNKEQIEARLDTVEELTKN--------------------TFARQELFKC 331
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
LS V D++R R+ + A+P + +A+ + +
Sbjct: 332 LSHVY-------DLERLTARLSYGKASPRDMLALAATLACLPE---------------VR 369
Query: 562 KTLHSALLKRLILTASSPAVIGK---AAKLLSTVNKEAA---DQGDLLNLMIISNGQFSE 615
K +H + L LT + G +AKLL +N +A +G+ II+NG E
Sbjct: 370 KIIHQH--QVLTLTKYLEPISGLDDLSAKLLKAINPDAPVTLHEGN-----IINNGYIPE 422
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKV 673
+ R R ++ + L N R++ +++L+ + IE+ AN VP ++ +
Sbjct: 423 IDRLRAVASGGRDWIARLENQEREKTKIKSLKIGYNKVFGYYIEITNANSHLVPEDYIRK 482
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY +PE+ Q+ A E+L + A + E + A QA+ +
Sbjct: 483 QTLANCERYITPELKEYEQQVLNAQEKLFDLEYAVYTELKDEVLSHTPPILNAAQAIGEI 542
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D +LA + ++VRP ++ IHI GRHPV++ + D FVPNDT L + +
Sbjct: 543 DVFLSLAEAAVRHHYVRPEINNEG---TIHIVEGRHPVVEQVCNDLFVPNDTLLTSSKSL 599
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS Y+RQVALI +++QVGSFVPA A + + D IYTR+GASD++ G+S
Sbjct: 600 A-LITGPNMGGKSTYMRQVALIVLLSQVGSFVPAQKAAIALRDCIYTRVGASDNLASGQS 658
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVLFV 911
TF+ E+NE ++IL+N ++SL+I+DE+GRGT+T+DG+++A+A ++YL + + LF
Sbjct: 659 TFMVEMNEVAFILQNAASRSLIILDEVGRGTATYDGLSLAWAIVEYLAGNPTAQPLTLFA 718
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ ++T F +V HV+ + D+ +L+K++PG ++ S+G
Sbjct: 719 THYHELTALETMFP-AVFNLHVAV-----------REKGSDILFLHKILPGKADRSYGLH 766
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLV-KLSDQEQ 1019
VA++A LP + RA I +LE+ +++ + ++L L DQE+
Sbjct: 767 VAKIAGLPLDLLKRAESILRELESLSGETYPDKATRVEVLQPSLFDQEE 815
>gi|346322336|gb|EGX91935.1| DNA mismatch repair protein msh6 [Cordyceps militaris CM01]
Length = 1207
Score = 299 bits (766), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 267/954 (27%), Positives = 437/954 (45%), Gaps = 102/954 (10%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P P T+ P + ++P E+Q E+K D ++ + G + +
Sbjct: 301 REPGDPDYDPRTIFIPPLAWNN------FSPFEKQYWEIKQNLWDTIVFFKKGKFYELYE 354
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
DA + + N +P L+ V + + +KV V Q ET
Sbjct: 355 NDATIGHQEFDFKMTDRVNMRMVGVPESVLDHWVNQFIAKQYKVARVDQMETN------- 407
Query: 181 GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDD--GNVGKIRNGV 236
G+ + K T + A+ + + C + LV ++ DD + I+ V
Sbjct: 408 -----LGKEMRERQDK-TGKKADKIISRQLACVLTAGTLVDGSMLQDDMAAHCVAIKESV 461
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
DG V G+ V+ +TG EF D + E + + P E+LL + LS + +
Sbjct: 462 V-DGLPV-FGIAFVDTATGRFFLTEFVDDVDLTKFETFIAQIGPREMLLEKSHLSTKANR 519
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
+L P + + F ++ + S D + PE +
Sbjct: 520 VLKNNTSP-TTIWTHLKHGVEFWDADTCRRELT-----AANYFSTEADSDGGWPEALEKQ 573
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF---RSLSGSMEMTLSANTLQQ 412
+ +M+ AV AL +R LK +ER + ++F + + + L TL
Sbjct: 574 RDNDVLMS----AVGALVWYLRFLK---VERPLLSQSNFSMYNPIQKNGTLVLDGQTLIN 626
Query: 413 LEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESM 472
LE+ N+ NG GTL ++N +T +G RL R+WV HPL + + I+ RLDAV
Sbjct: 627 LEIFSNSVNGGSDGTLFQLLNKCITPFGKRLFRQWVAHPLQNIDRINERLDAV------- 679
Query: 473 GSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF 532
D N+D ++ E QF + L + PD++R I+RI P +F
Sbjct: 680 ------------DMLNNDPSVRE-QF-------ASQLVKMPDLERLISRIHACACKPEDF 719
Query: 533 IAVMQAILYAGKQLQQLHIDGEYREK-VTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
+ V+ +Q+ EY V+S + LL RLI AS P++ A +
Sbjct: 720 VRVLDG-------FEQI----EYTMTLVSSFKGGNGLLDRLI--ASMPSLEEPLAYWRNA 766
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSV 651
++ A +L I G + + + +++ K +L L+ + +L + L+F V
Sbjct: 767 FDRRKAKDEKIL---IPERGIEEDFDASLERMENIKSQLQELLTEKKGELKCKALKFTDV 823
Query: 652 SGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
IE P KVP +W ++++TK R++ E+ + + +L A E + + R
Sbjct: 824 GKEIFQIEAPKAIKVPSSWRQMSATKDVKRWYFTELTSLVRELQEAEETHSQLVREVAAR 883
Query: 712 FLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGRH 769
F K+F Y + +A+QA+A LDCL +LA S + RP FVD + + RH
Sbjct: 884 FCKKFDVDYELWLSAIQAIAQLDCLVSLAKASSCLGEPSCRPQFVDQDRSL-VEFEELRH 942
Query: 770 PVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
P + D F+PND L E+ ++TG N GKS +R + IMAQ+G +VPA S
Sbjct: 943 PCMLNTTGD-FIPNDIKLGGEQANINLLTGANAAGKSTVLRMSCIAVIMAQIGCYVPAVS 1001
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
A+L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DG
Sbjct: 1002 AKLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDELGRGTSSYDG 1061
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKS 949
VA+A A L ++ H C+ F THY +A T+F + + ++ +D +
Sbjct: 1062 VAVAQAVLHHVATHIGCVGFFATHYHSLA---TEFENH------PEIRARRMQIHVDD-A 1111
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++ +T+LYK+ GV+E SFG A + + + I RA V A E E +SR+++
Sbjct: 1112 ERRITFLYKLEDGVAEGSFGMHCAAMCGISNTVIERAEVAAK--EWEHTSRLKD 1163
>gi|261206036|ref|XP_002627755.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis SLH14081]
gi|239592814|gb|EEQ75395.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis SLH14081]
Length = 1170
Score = 299 bits (766), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 277/1023 (27%), Positives = 454/1023 (44%), Gaps = 160/1023 (15%)
Query: 32 PQQTPPPKIAATVSFSPA---KRKVVSSLFPPKT---------------PKKPKLSPHTL 73
P T PPK A V+ + K+KV + + P+ P P P T+
Sbjct: 214 PNDTEPPKPRAAVTRNAVPGEKKKVKAHMSEPEQRYPWLANITDIDRNPPGHPDYDPRTI 273
Query: 74 NPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY 133
P S K++P E+Q E+K K+ D ++ + G + + DA + ++ +
Sbjct: 274 YIPPLAWS------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 327
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------AIKAHG-PGKAG 184
N +P L+ + V GFK+ V Q+E+A K +G PGK
Sbjct: 328 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREKQGKTNGTPGKQD 387
Query: 185 P-FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF 241
R L+ + T TL V G +D S Y V I+ + D
Sbjct: 388 KIIRRELACVLTSGTL-----VDGSMLQDDM---STYCVA----------IKEALVNDL- 428
Query: 242 DVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAY 300
G+ V+ +TG EF D + E + P ELLL + +S + ++L
Sbjct: 429 -PAFGIAFVDTATGQFYLAEFMDDVDMTKFETFVAQTRPQELLLEKSVMSTKALRILKNN 487
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
GP + ++ + + E+ + +S++ D PE H E
Sbjct: 488 TGPTTLWNYLKPCKEFWEADITVREL-----DASNYFVSDDGDNIEAWPEALRHARDKEF 542
Query: 361 IMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQLEVLR 417
+M+ A +++L+ +ER ++ +G + + + + L TL LE+
Sbjct: 543 VMS-------AFGALVQYLRMLKIERDLITIGNFTWYDPIKKATSLVLDGQTLINLEIFS 595
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N+ +G + GTL ++N T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 596 NSFDGGQEGTLFQLLNRCTTPFGKRMFKQWVCHPLMDTKKINARLDAV------------ 643
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
D N+D +I + QF SS LT + PD++R I+R+ R+ +F+ V++
Sbjct: 644 -------DALNADRSI-QNQF----SSQLTKM---PDLERLISRVHARSCKAQDFLRVLE 688
Query: 538 A---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
I YA L++ GE ++ +L+ AS P + G + ++
Sbjct: 689 GFEQIDYAMGLLKETG-PGE------------GVIGQLV--ASMPDLSGHLQYWKTAFDR 733
Query: 595 -EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+A D G +++ G + + + + +LD L+ RKQLG + +
Sbjct: 734 TKAKDSG----ILVPEAGVEEDFDASHDRISEIESDLDQLLKKVRKQLGSNAIVYRDNGK 789
Query: 654 ITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+ +E+P K VP +W ++++TK+ R++ E+ + + +L A E + + + F
Sbjct: 790 EIYQLEVPIKIKNVPKSWDQMSATKQAKRFYFAELRSLIRELQEAQETHSQIVKEVAGRF 849
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSGRHP 770
F Y+ + AAV+ +A LDCL +LA S + RPVFVDD V + RHP
Sbjct: 850 YARFDENYSTWLAAVRVIAQLDCLISLARASSALGYPSCRPVFVDDERSV-LEFEELRHP 908
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+ + D F+PND L ++TG N A IMAQ+G VP SA
Sbjct: 909 CMLPNVGD-FIPNDVKLGGNSPNINLLTGAN-----------AAAVIMAQIGCHVPCKSA 956
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +D + +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGV
Sbjct: 957 RLTPVDRVMSRLGANDNIFASQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGV 1016
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK-- 948
A+A A L ++ H + F THY + +F G H + P +
Sbjct: 1017 AVAQAVLHHVATHIGALGFFATHYHSLT---AEFEG------------HPEIAPRRMRIH 1061
Query: 949 ---SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRS 1005
++ VT+LYK+ GV+E SFG A + +P + RA V A + E +SR++
Sbjct: 1062 VDDEEKRVTFLYKLEDGVAEGSFGMHCASMCGIPDKVVERAEVAAKQWEH--TSRLKESL 1119
Query: 1006 AKR 1008
+R
Sbjct: 1120 ERR 1122
>gi|298710503|emb|CBJ25567.1| MutS protein homolog 6 [Ectocarpus siliculosus]
Length = 1372
Score = 299 bits (766), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 296/1056 (28%), Positives = 463/1056 (43%), Gaps = 174/1056 (16%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P +P TL P+ S K TP Q + K++ D +L +VG + F
Sbjct: 323 RRPDDPLYNPRTLYVPPSFLS------KETPAMVQWWKFKSQNMDTVLFFKVGKFYELFH 376
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
DA++ + L + ++ + P LV+ G++V V+Q ET +
Sbjct: 377 VDADVGMQELDLI-YMKGEKAHSGFPEISYGKFADGLVSKGYRVARVEQVETPDMLKARN 435
Query: 181 GKAGPFG-------RGLSALYTKATLEAA--EDVGGGEDGCGGESNYLVCV----VD--- 224
G G R L ++ ++ T +DV DG N ++ + VD
Sbjct: 436 ASVGRNGTKDKVVKRELCSILSRGTRTYCFLDDVSSTPDGSPRSVNMILSIKETAVDALS 495
Query: 225 --DDGNVGKIRNGVFGDGFDVRL---GVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLS 279
D G+ G DG + GV V+ +T G+F D RS L +L
Sbjct: 496 EFDPGSPGSAD----ADGPPAAVCEYGVCMVDATTATFSLGQFADDPARSRLRTLLAQQL 551
Query: 280 PAELLLGQP-LSKQTEKMLLAYAGPASNVRV--------------ECASRDCFIGGGALA 324
P E+++ + LS+ T M+ A AS++ + E +R F
Sbjct: 552 PVEIVMEKDNLSETTLHMIKCMAPLASHMTLHKGTEFWDASRTVQELKNRRYFRNESNAK 611
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ--- 381
E S + G SN ED + R+ +EG + LA+ AL H ++
Sbjct: 612 EKSSAGDGKG----SNVEDWPPIL------RAVVEGGKDGA-LALSALGGATWHTRRALI 660
Query: 382 ----FGLERIMCL-------------------------GASFRSLSGSMEMT-------L 405
+ R + S SL GS T L
Sbjct: 661 DHDLLSMRRFVAYIPSDMKQPDSNAAPSTPNDSQEAGDLPSASSLPGSSAQTPSQSHMVL 720
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
+L LEVLRN+S+G E G+L +N T +G RLL+ WV PL I+ RLDAV
Sbjct: 721 DGVSLSNLEVLRNSSDGGEKGSLWAFVNRCSTAFGRRLLKDWVLKPLLFPTHINGRLDAV 780
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIF-- 523
SE+A + E ++ + L + PD++R ++R+
Sbjct: 781 SELAGDLSP-----------EADASRAL---------------LKKLPDVERLLSRVHSM 814
Query: 524 ---HRTATPSEFIAVM-QAILYAGKQLQQLH--IDGEYR-----EKVTSKTLHSALLKRL 572
HR++ E A+M + Y+ +++ +DG + E S ++ SALL++
Sbjct: 815 ASKHRSSEHPESRAIMYEDTKYSIRKVNDFLSVLDGLEKADRLPEIFKSASVESALLRKC 874
Query: 573 ILTASS----PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV-ARARKAV---- 623
+++ S P + + + + + + L+ L + F ++ R R V
Sbjct: 875 VISKSEGGQFPDMSSAISYFRNAFDAGTSKKKGLIELKPGVDEDFDKIKPRGRYFVWPVL 934
Query: 624 -----QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF----KVPLNWAKVN 674
+ K ELD + RK+LG + E+ + + I++P + + P ++ +
Sbjct: 935 AQIDIKEIKSELDGHLREQRKRLGCSDAEYWHSAKEKYQIQVPERYFSKNRQPSDYELKS 994
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
K +R+ +P + L+QLA A + L R +F + + + V+ L+ LD
Sbjct: 995 KKKGALRFWTPFIKDHLEQLAAAEQRLGDAQRDQMRGLFAKFDEHRELWASTVRCLSHLD 1054
Query: 735 CLHALATLSRNKNFVRPVFVDD-HEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAERE 792
+ +LA +S F RP F D P I + + RHP L T ++PND L A
Sbjct: 1055 AVLSLAEVSAQPGFSRPRFHDGASTPSFIRLKNARHPCLAQTYQGGEYIPNDATLGAAPA 1114
Query: 793 YCQ----------IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
++TGPNMGGKS +RQ L+ I+AQVG FVPA A L LD I+TR+
Sbjct: 1115 GISDDAPAAPNMLLLTGPNMGGKSTLLRQTCLVAILAQVGCFVPADEAHLTPLDRIFTRV 1174
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD I G+STF EL+E + IL + T++SLVI+DELGRGTST DG AIA+A YL++
Sbjct: 1175 GASDRILAGQSTFFLELSETANILHHATSRSLVILDELGRGTSTFDGTAIAHAVAHYLVK 1234
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
KC+ +F THY + + + V H+S L D+ +Q VT+LYK+ PG
Sbjct: 1235 SAKCLAMFATHYHSLVEDWGHHS-EVALGHMSCLVE-------DNGGEQRVTFLYKLAPG 1286
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
SFG VA+LAQLP + IS A + + + E +S
Sbjct: 1287 PCPKSFGINVARLAQLPDAVISAAQLKSEEFERALS 1322
>gi|156057209|ref|XP_001594528.1| hypothetical protein SS1G_04335 [Sclerotinia sclerotiorum 1980]
gi|154702121|gb|EDO01860.1| hypothetical protein SS1G_04335 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1246
Score = 299 bits (765), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 254/957 (26%), Positives = 419/957 (43%), Gaps = 109/957 (11%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P TL P + K+TP E+Q E+K K D +L + G + + D
Sbjct: 320 PGHPDYDPRTLYIPPMAFN------KFTPFEKQYWEIKQKCWDTILFFKKGKFYELYERD 373
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK------ 176
A + ++ + N +P L + + G+KV V Q E+A K
Sbjct: 374 ATIGHQIFDLKLTDRVNMSMVGVPEMSLQHWANQFLAKGYKVAVGDQKESALAKEMRERE 433
Query: 177 -AHGPGKAGP-----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVG 230
+ GP G R LS + T TL E + + CV
Sbjct: 434 DSAGPSSKGKKPDKIIHRELSYILTAGTLV--------EGSMLQDDSATYCVA------- 478
Query: 231 KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-L 289
I+ + D G+ V+ STG EF D + E + + P ELLL + +
Sbjct: 479 -IKESITDDNLPA-FGISFVDTSTGQFFLSEFTDDVDLTKFETFVAQIRPQELLLEKSCV 536
Query: 290 SKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVP 349
S + ++L GP + + ++ + E+ + G ++ + P
Sbjct: 537 STKVLRILKNNTGPTTVWNYLKSEKEFLTAEKSRREL-----DYG-GYFASGDGGKETWP 590
Query: 350 EQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF---RSLSGSMEMTLS 406
E+ +E + DL + A ++LK LE+ + +F + + L
Sbjct: 591 EE------LEKARDN-DLLISAFGALFQYLKVLQLEKALLTQGNFAWYNPIQKGTTLVLD 643
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TL LE+ N +G+ GTL +++ T +G RL R+WV+HPL D I+ RLDAV
Sbjct: 644 GQTLINLEIFSNTFDGNTDGTLYTLLDRCTTPFGKRLFRQWVSHPLSDIKRINERLDAV- 702
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
D N D + S +S PD++R I+RI +
Sbjct: 703 ------------------DLLNKDDNLSR--------SFKSSTSTLPDLERLISRIHAGS 736
Query: 527 ATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
P +F+ V++ +Q++ + +E + + + + RL+ A+ P +
Sbjct: 737 CRPEDFLKVLEGF----EQIEYIQ-----KEILGNYSGGDGVFSRLV--ATIPNLADPLQ 785
Query: 587 KLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
+ +++ A + +L + G + ++ ++ +EL SL+ +K+ + +
Sbjct: 786 WWKNAFDRKKAKEDKIL---VPERGVEEDFDASQDRIEEIHQELASLLKKYQKKYDSKKI 842
Query: 647 EFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCR 706
EF ++ + +++P + KVP +W +++ RY+ PE+ + L E + +
Sbjct: 843 EFKNIGKEIYQLQMPVSIKVPNDWKMMSAASGFKRYYFPELTNIIRDLQETQETHGQIVK 902
Query: 707 AAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHI 764
F F Y + AV+ +A LDCL +LA S RP FVD V +
Sbjct: 903 QVASRFYARFDEDYEIWLQAVKTVAQLDCLFSLAAASSALGTPSCRPKFVDSERSV-VEF 961
Query: 765 CSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
RHP + + D F+PND L + ++TG N GKS +R + IMAQ+G +
Sbjct: 962 EELRHPCILPNVTD-FIPNDVQLGGKSANINLLTGANAAGKSTILRMTCVAVIMAQLGCY 1020
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA SA L +D I +R+GA+D+I +STF EL+E IL T++SLVI+DELGRGT
Sbjct: 1021 VPAKSATLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATSRSLVILDELGRGT 1080
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
S++DGV++A A L ++ H C+ F THY +A +F H + +K M
Sbjct: 1081 SSYDGVSVAQAVLHHVASHIGCIGFFATHYHSLA---LEFDS-----HPEVI--NKRMAI 1130
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
+ V +LYK+ GV+E SFG A + +P + RA V A E E +SR+
Sbjct: 1131 EVDDESRSVLFLYKLENGVAEGSFGMHCASMCGIPRKVVDRAEVAAR--EWEYTSRL 1185
>gi|422874017|ref|ZP_16920502.1| DNA mismatch repair protein MutS [Clostridium perfringens F262]
gi|380305012|gb|EIA17295.1| DNA mismatch repair protein MutS [Clostridium perfringens F262]
Length = 909
Score = 299 bits (765), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 272/931 (29%), Positives = 436/931 (46%), Gaps = 152/931 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 4 TPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP N ++ RLV G+KV + +Q E A G K YT ++ E+
Sbjct: 64 IPFHASNSYIGRLVAKGYKVAICEQVEDPKF-AKGIVKRDVIKVITPGTYTDSSF--VEE 120
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YGEF 262
++NY++ + + D R + +ISTGD + GE
Sbjct: 121 T---------KNNYIMTI--------------YADLERNRCSLAITDISTGDFLATEGEL 157
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
G + + +P E++L L ++ K + PA SR
Sbjct: 158 EKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR-------- 198
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
+ + +E E+ L+N E+ N S M + AL I ++
Sbjct: 199 --KPIEYFEENFEEVLNNQ------FGEKSNSLSL------MVKKSSNALVKYILDTQKI 244
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
L I + SL M + LS+ + LE+ N S+ G+LL +++ T T GSR
Sbjct: 245 SLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMGSR 300
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 301 MLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY--- 344
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
DI+R + +I ++ A + IA+ +I GK K +
Sbjct: 345 -----------DIERILGKISNKNANAKDLIALKTSI---GKIPNV---------KGIIE 381
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVAR 618
S+LLK + +LL KE GDL I +G SE+
Sbjct: 382 NCTSSLLKNYHHNLDD---LRDIYELLEKSIKEDPSLTLKDGDL-----IKDGFNSEIDE 433
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPL-NWAKV 673
R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+ +P + +
Sbjct: 434 LRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYSSIPEGRYIRK 491
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYYAEFQAAVQAL 730
+ R+ +PE+ ++L A+E+L C +D FL E + + + +
Sbjct: 492 QTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHIDRLKTTAKII 548
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHA 789
A LDC+ LA ++ +F++P +D E I +GRHPV++ ++ F+PNDT ++
Sbjct: 549 AELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGEFIPNDTIINK 605
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + ++D I+TR+GASD +
Sbjct: 606 DDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISIVDKIFTRIGASDDLA 665
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCM 907
G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y+ ++K +C
Sbjct: 666 GGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCK 725
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ ++ + G V Y V+ + D ++ +L K++ G ++ S
Sbjct: 726 TLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLRKIIEGGADQS 773
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
+G +VA+LA +P I+RA I KLE E S
Sbjct: 774 YGIEVAKLAGIPDEVINRAKEILEKLEMESS 804
>gi|239611022|gb|EEQ88009.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis ER-3]
Length = 1170
Score = 298 bits (764), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 277/1023 (27%), Positives = 454/1023 (44%), Gaps = 160/1023 (15%)
Query: 32 PQQTPPPKIAATVSFSPA---KRKVVSSLFPPKT---------------PKKPKLSPHTL 73
P T PPK A V+ + K+KV + + P+ P P P T+
Sbjct: 214 PNDTEPPKPRAAVTRNAVPGEKKKVKAHMSEPEQRYPWLANITDIDRNPPGHPDYDPRTI 273
Query: 74 NPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY 133
P S K++P E+Q E+K K+ D ++ + G + + DA + ++ +
Sbjct: 274 YIPPLAWS------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 327
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------AIKAHG-PGKAG 184
N +P L+ + V GFK+ V Q+E+A K +G PGK
Sbjct: 328 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREKQGKTNGTPGKQD 387
Query: 185 P-FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF 241
R L+ + T TL V G +D S Y V I+ + D
Sbjct: 388 KIIRRELACVLTSGTL-----VDGSMLQDDM---STYCVA----------IKEALVNDL- 428
Query: 242 DVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAY 300
G+ V+ +TG EF D + E + P ELLL + +S + ++L
Sbjct: 429 -PAFGIAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELLLEKSVMSTKALRILKNN 487
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
GP + ++ + + E+ + +S++ D PE H E
Sbjct: 488 TGPTTLWNYLKPCKEFWEADITVREL-----DASNYFVSDDGDNIEAWPEALRHARDKEF 542
Query: 361 IMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQLEVLR 417
+M+ A +++L+ +ER ++ +G + + + + L TL LE+
Sbjct: 543 VMS-------AFGALVQYLRMLKIERDLITIGNFTWYDPIKKATSLVLDGQTLINLEIFS 595
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N+ +G + GTL ++N T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 596 NSFDGGQEGTLFQLLNRCTTPFGKRMFKQWVCHPLMDTKKINARLDAV------------ 643
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
D N+D +I + QF SS LT + PD++R I+R+ R+ +F+ V++
Sbjct: 644 -------DALNADRSI-QNQF----SSQLTKM---PDLERLISRVHARSCKAQDFLRVLE 688
Query: 538 A---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
I YA L++ GE ++ +L+ AS P + G + ++
Sbjct: 689 GFEQIDYAMGLLKETG-PGE------------GVIGQLV--ASMPDLSGHLQYWKTAFDR 733
Query: 595 -EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+A D G +++ G + + + + +LD L+ RKQLG + +
Sbjct: 734 TKAKDSG----ILVPEAGVEEDFDASHDRISEIESDLDQLLKKVRKQLGSNAIVYRDNGK 789
Query: 654 ITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+ +E+P K VP +W ++++TK+ R++ E+ + + +L A E + + + F
Sbjct: 790 EIYQLEVPIKIKNVPKSWDQMSATKQAKRFYFAELRSLIRELQEAQETHSQIVKEVAGRF 849
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSGRHP 770
F Y+ + AAV+ +A LDCL +LA S + RPVFVDD V + RHP
Sbjct: 850 YARFDENYSTWLAAVRVIAQLDCLISLARASSALGYPSCRPVFVDDERSV-LEFEELRHP 908
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+ + D F+PND L ++TG N A IMAQ+G VP SA
Sbjct: 909 CMLPNVGD-FIPNDVKLGGNSPNINLLTGAN-----------AAAVIMAQIGCHVPCKSA 956
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +D + +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGV
Sbjct: 957 RLTPVDRVMSRLGANDNIFASQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGV 1016
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK-- 948
A+A A L ++ H + F THY + +F G H + P +
Sbjct: 1017 AVAQAVLHHVATHIGALGFFATHYHSLT---AEFEG------------HPEIAPRRMRIH 1061
Query: 949 ---SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRS 1005
++ VT+LYK+ GV+E SFG A + +P + RA V A + E +SR++
Sbjct: 1062 VDDEEKRVTFLYKLEDGVAEGSFGMHCASMCGIPDKVVERAEVAAKQWEH--TSRLKESL 1119
Query: 1006 AKR 1008
+R
Sbjct: 1120 ERR 1122
>gi|182626334|ref|ZP_02954089.1| DNA mismatch repair protein MutS [Clostridium perfringens D str.
JGS1721]
gi|177908353|gb|EDT70898.1| DNA mismatch repair protein MutS [Clostridium perfringens D str.
JGS1721]
Length = 909
Score = 298 bits (764), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 281/968 (29%), Positives = 449/968 (46%), Gaps = 160/968 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 2 KLTPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPM 61
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
IP N ++ RLV G+KV + +Q E A G K YT ++
Sbjct: 62 CGIPFHASNSYIGRLVAKGYKVAICEQVEDPKF-AKGIVKRDVIKVITPGTYTDSSF--V 118
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YG 260
E+ ++NY++ + + D R + +ISTGD + G
Sbjct: 119 EET---------KNNYIMTI--------------YADLERNRCSLAITDISTGDFLATEG 155
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E G + + +P E++L L ++ K + PA SR
Sbjct: 156 ELEKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR------ 198
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ + +E E+ L+N E+ N S M + AL I +
Sbjct: 199 ----KPIEYFEENFEEVLNNQ------FGEKSNSLSL------MVKKSSNALVKYILDTQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + SL M + LS+ + LE+ N S+ G+LL +++ T T G
Sbjct: 243 KISLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMG 298
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SR+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 299 SRMLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY- 344
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
DI+R + +I ++ A + IA+ +I GK K
Sbjct: 345 -------------DIERILGKISNKNANAKDLIALKTSI---GKIPNV---------KGI 379
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEV 616
+ S+LLK I +LL KE GDL I +G SE+
Sbjct: 380 IENCTSSLLKNYHHNLDDLRDI---YELLEKSIKEDPSLTLKDGDL-----IKDGFNSEI 431
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPL-NWA 671
R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+ +P +
Sbjct: 432 DELRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYSSIPEGRYI 489
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYYAEFQAAVQ 728
+ + R+ +PE+ ++L A+E+L C +D FL E + + +
Sbjct: 490 RKQTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHIDRLKTTAK 546
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNL 787
+A LDC+ LA ++ +F++P +D E I +GRHPV++ ++ F+PNDT +
Sbjct: 547 IIAELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGEFIPNDTII 603
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ + IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + V+D I+TR+GASD
Sbjct: 604 NKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDD 663
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--K 905
+ G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y+ ++K +
Sbjct: 664 LAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLR 723
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
C LF THY ++ ++ + G V Y V+ + D ++ +L K++ G ++
Sbjct: 724 CKTLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLRKIIEGGAD 771
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENM 1025
S+G +VA+LA +P I+RA I LE E S+K +L + L + +E
Sbjct: 772 QSYGIEVAKLAGIPDEVINRAKEILETLEME--------SSKDNLDLALKEVNASKEEMK 823
Query: 1026 PVSPESFY 1033
S E+ Y
Sbjct: 824 EASIEASY 831
>gi|125973295|ref|YP_001037205.1| DNA mismatch repair protein MutS [Clostridium thermocellum ATCC
27405]
gi|256003775|ref|ZP_05428763.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM 2360]
gi|281417499|ref|ZP_06248519.1| DNA mismatch repair protein MutS [Clostridium thermocellum JW20]
gi|385778793|ref|YP_005687958.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM 1313]
gi|419723190|ref|ZP_14250325.1| DNA mismatch repair protein MutS [Clostridium thermocellum AD2]
gi|419724906|ref|ZP_14251961.1| DNA mismatch repair protein MutS [Clostridium thermocellum YS]
gi|171769986|sp|A3DDI3.1|MUTS_CLOTH RecName: Full=DNA mismatch repair protein MutS
gi|125713520|gb|ABN52012.1| DNA mismatch repair protein MutS [Clostridium thermocellum ATCC
27405]
gi|255992336|gb|EEU02430.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM 2360]
gi|281408901|gb|EFB39159.1| DNA mismatch repair protein MutS [Clostridium thermocellum JW20]
gi|316940473|gb|ADU74507.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM 1313]
gi|380771526|gb|EIC05391.1| DNA mismatch repair protein MutS [Clostridium thermocellum YS]
gi|380780957|gb|EIC10620.1| DNA mismatch repair protein MutS [Clostridium thermocellum AD2]
Length = 870
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 256/946 (27%), Positives = 437/946 (46%), Gaps = 160/946 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +E+K +Y D +L +G + F DAE+A++ L I L+
Sbjct: 5 TPMMQQYLEIKEQYKDCILFFRLGDFYEMFFSDAEVASRELEITLTGKDCGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + ++ +L++ G+KV + +Q E A+ G R + + T T+ +
Sbjct: 65 VPFHSADSYIAKLISKGYKVAICEQIEDPALAK------GLVKRDVIRIVTPGTVTDSAM 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ NYL+ + + G+ V+++TG+ +
Sbjct: 119 LDEKKN------NYLMSIYKNKN----------------YYGIACVDLTTGEFLSTHITF 156
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASR-DCFIGGGAL 323
G + L + SP+E+++ N++ R D +I G
Sbjct: 157 GNTFNKLMDEIAKFSPSEIVVNGEFFHD------------ENIKKTLKQRFDVYISG--- 201
Query: 324 AEVMSLYENMGEDTLSNNEDQNM---DVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
L + E S + +N V E+ I + + Q + + H++
Sbjct: 202 -----LEDKFFEKEFSIQKVRNYFKDYVIEENAFDLYINASGALLEYLEQTQKVNLSHIQ 256
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
F + RI M L T + LE+ + G+LL +++ T+T G
Sbjct: 257 NFNVYRI------------EEYMILDMATRRNLELTETMREKNRKGSLLWVLDRTMTSMG 304
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R LR+W+ PL + + I RLDAV+E E +
Sbjct: 305 GRTLRKWIEQPLINLHDIKDRLDAVNEFKER---------------------------FM 337
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQQLHIDGE--- 554
I S V L DI+R +T++ +A + I++ +I Y + L+ L D
Sbjct: 338 IRSEVRELLRAVYDIERLMTKVILGSANCRDLISIKHSIGQVPYIKELLRDLKADLNVLS 397
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
Y E T ++ + K ++ P V A +G II G
Sbjct: 398 YNELDTLTDVYEIIDKAIV---DDPPV--------------AVKEGG-----IIKEGFNE 435
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF--KVPLNW 670
EV R R A + K+ + L + R++ G++NL+ F V G + IE+ ++ +VP ++
Sbjct: 436 EVDRLRSASKDGKKWIAHLESKERERTGIKNLKVGFNKVFG--YYIEVTKSYYSQVPDDY 493
Query: 671 AKVNSTKKTIRYHSPE-------VLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ + RY +PE VL A D+L ++ + R + KE
Sbjct: 494 IRKQTLANCERYITPELKEIENTVLGAEDRLVELEYQIFVDVR---NKVAKEIN----RL 546
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVP 782
+ ++LA +D L +LA ++ +++ P DD +I I GRHPV++ I+ + FVP
Sbjct: 547 KTTARSLARIDVLCSLAEVADRESYTMPEVTDDD---KIEIKDGRHPVVEKIIGQEAFVP 603
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
NDT L + IITGPNM GKS Y+RQVALI +MAQ+GSFVPA SA++ ++D I+TR+
Sbjct: 604 NDTYLDMDENQIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAKIGIVDRIFTRV 663
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD + G+STF+ E++E + IL N T++SL+++DE+GRGTST+DG++IA+A ++Y+ E
Sbjct: 664 GASDDLAAGQSTFMVEMSEVANILGNATSKSLLVLDEIGRGTSTYDGLSIAWAVIEYIGE 723
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
LF THY ++ +++ + G + Y +S + +D+ +L K++ G
Sbjct: 724 KIGARTLFATHYHELTELEERIEG-IKNYCISV-----------EEKGEDIIFLRKILRG 771
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
+++S+G +VA+LA +P I RA I KLE +R + R +R
Sbjct: 772 GADNSYGVQVARLAGIPDPVIHRAKEILKKLEDADITRKEKRITRR 817
>gi|168207459|ref|ZP_02633464.1| DNA mismatch repair protein MutS [Clostridium perfringens E str.
JGS1987]
gi|170661161|gb|EDT13844.1| DNA mismatch repair protein MutS [Clostridium perfringens E str.
JGS1987]
Length = 909
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 274/931 (29%), Positives = 436/931 (46%), Gaps = 152/931 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 4 TPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP N ++ RLV G+KV + +Q E + A G K YT ++ E+
Sbjct: 64 IPFHASNSYIGRLVAKGYKVAICEQVEDPKV-AKGIVKRDVIKVITPGTYTDSSF--VEE 120
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YGEF 262
++NY++ + D RN R + +ISTGD + GE
Sbjct: 121 T---------KNNYIMTIYSDLE-----RN---------RCSLAITDISTGDFLATEGEL 157
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
G + + +P E++L L ++ K + PA SR
Sbjct: 158 EKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR-------- 198
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
+ + +E E+ L N E+ N S M + AL I ++
Sbjct: 199 --KPIEYFEKNFEEVL------NAQFGEKSNSLSL------MVKKSSNALVKYILDTQKI 244
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
L I + SL M + LS+ + LE+ N S+ G+LL +++ T T GSR
Sbjct: 245 SLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMGSR 300
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 301 MLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY--- 344
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
DI+R + +I ++ A + IA+ +I GK K +
Sbjct: 345 -----------DIERILGKISNKNANAKDLIALKTSI---GKIPNV---------KGIIE 381
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVAR 618
S+LLK + +LL KE GDL I +G SE+
Sbjct: 382 NCTSSLLKNYYNNLDD---LRDIYELLEKSIKEDPSLTLKDGDL-----IKDGFNSEIDE 433
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPL-NWAKV 673
R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+ +P + +
Sbjct: 434 LRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYSSIPEGRYIRK 491
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYYAEFQAAVQAL 730
+ R+ +PE+ ++L A+E+L C +D FL E + + + +
Sbjct: 492 QTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHIDRLKTTAKII 548
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHA 789
A LDC+ LA ++ +F++P +D E I +GRHPV++ ++ F+PNDT ++
Sbjct: 549 AELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGEFIPNDTIINK 605
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + V+D I+TR+GASD +
Sbjct: 606 DDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLA 665
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCM 907
G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y+ ++K +C
Sbjct: 666 GGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCK 725
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ ++ + G V Y V+ + D ++ +L K++ G ++ S
Sbjct: 726 TLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLRKIIEGGADQS 773
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
+G +VA+LA +P I+RA I LE E S
Sbjct: 774 YGIEVAKLAGIPDEVINRAKEILETLEMESS 804
>gi|424842045|ref|ZP_18266670.1| DNA mismatch repair protein MutS [Saprospira grandis DSM 2844]
gi|395320243|gb|EJF53164.1| DNA mismatch repair protein MutS [Saprospira grandis DSM 2844]
Length = 884
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 259/947 (27%), Positives = 436/947 (46%), Gaps = 180/947 (19%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASI 145
TPL Q + K KY D +L+ VG + FG DA +A+KVLGI +N A
Sbjct: 13 TPLMAQYNDFKQKYADAVLLFRVGDFYETFGSDAVLASKVLGITLTARNNGSSKIELAGF 72
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAED 204
P L+ ++ +LV AG++V V Q E P K RG+ L T
Sbjct: 73 PHHSLDTYLPKLVRAGYRVAVCDQLEK-------PSKQKKIVKRGVVELVTPG------- 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ +SN + + ++G+ +LG+ ++IST + + E N
Sbjct: 119 ITTNDNILDHKSNNFLAAL----HIGR----------KDQLGLALLDISTAEFLVVEGNT 164
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
+ ++ +L + PAE++ + K+
Sbjct: 165 ----ASIDKLLQNFQPAEIIYAKNQKKE-------------------------------- 188
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL--ALTIRHLKQF 382
L + GE + IE + MPD + + L + LK F
Sbjct: 189 ----LLDRFGERY----------------YTYGIEDWVFMPDYSREKLLEQFEVSSLKGF 228
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSN----------------GSEYG 426
G+E++ + ++ ++ T + N +++ R ++ GS Y
Sbjct: 229 GIEQLEMAQIAAGAILHYVQTTENKNLKHIVQIARIPTDRYVWMDSFTIRNLELVGSAYS 288
Query: 427 T---LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
+ LL +M+ T++ GSRLLR+WV P D I +R + V E
Sbjct: 289 SGVSLLDVMDKTISPMGSRLLRKWVLMPRKDLTSIVSRHEVVQAFIE------------- 335
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
+P +++ L LG D++R + +I P E + ++IL G
Sbjct: 336 -----------QPNLALLIAEQLQQLG---DLERLVAKIPLGKINPREVRQLQRSILALG 381
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+ L D + + + ++ +R+ L P + + L D+G
Sbjct: 382 PIKEALAQDQQPQLQ--------SIAERMQLC---PLLCQRVDNWLKEEPAVKTDKGGF- 429
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELP 661
I+NG E+ R + +++E L+ + K+ G+ L+ F +V G + +E+
Sbjct: 430 ----IANGVSEELDELRDLIANSREHLERIRVQEAKETGIDKLKIGFNNVFG--YYLEVT 483
Query: 662 ANFK----VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+K +P +W + + + RY S E+ ++ A E++ + + + +
Sbjct: 484 NRYKDKDLIPDHWVRKQTLTNSERYISEELKQLEGKILSAEEKIIALEQKLFGELVLFLN 543
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y Q Q +A LDCLH+ L+ +N+ RP HE ++I I +GRHPV++ L
Sbjct: 544 DYIRPVQTNAQLVAQLDCLHSYHVLALEQNYCRPQM---HEGLEIEIKAGRHPVIEQQLK 600
Query: 778 --DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
+ +VPND L ER+ +ITGPNM GKS +RQ ALI +MAQ+G+FVPA SA+L ++
Sbjct: 601 AGELYVPNDIFLDNERQQVLMITGPNMSGKSALLRQTALISLMAQMGAFVPADSAKLGLI 660
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D I+TR+GASD+I G STF+ E+NE + IL N + +SL+++DE+GRGTST+DG++IA+A
Sbjct: 661 DRIFTRVGASDNISSGESTFMVEMNETASILNNISNRSLILLDEIGRGTSTYDGISIAWA 720
Query: 896 TLDYLLEH--KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDV 953
+YL H + LF THY ++ ++ +F + +HV+ K +G + V
Sbjct: 721 IAEYLHNHPTARPKTLFATHYHELNELAQQFD-RIKNFHVAT----KELG-------KKV 768
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+L K+ G SE SFG VA++A +PP I RA+ I A+LE + S++
Sbjct: 769 IFLRKLKAGGSEHSFGIHVAKMAGMPPQLILRASEILAQLEEQRSAQ 815
>gi|296418664|ref|XP_002838949.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634935|emb|CAZ83140.1| unnamed protein product [Tuber melanosporum]
Length = 1032
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 260/957 (27%), Positives = 442/957 (46%), Gaps = 132/957 (13%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P TL +P PS+ K++P E+Q E+K++ D ++ + G + + +D
Sbjct: 148 PDHPDYDPRTLF-VP-PSAWL----KFSPFEKQYWEIKSRLYDTVVFFKKGKFYELYEDD 201
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA--HGP 180
A + + + N +P L++ + + G+K+ V Q ETA K
Sbjct: 202 ATIGHREFDLKLTDRVNMRMVGVPESSLDMWAAQFIAKGYKIARVDQKETALGKEMREKC 261
Query: 181 GKAGP----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGV 236
GKAG R L+ + T TL E + E + Y V + + R
Sbjct: 262 GKAGKEEKIIRRELACVLTGGTL-VDESMLQDE-----MATYCVAIKE------SFREK- 308
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
+ G+ V+ +TG+ EF D F + E L + P EL++ + LS Q+ +
Sbjct: 309 -----EPSFGIAFVDTATGEFSLSEFEDDFDLTKFETFLAQIRPRELIIEKGFLSSQSTR 363
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
+L + + + G + E++S + GE S ++D+
Sbjct: 364 LLKNNTSLNTIWNKLKPGVEFWEGSTTVRELVS-KDYFGE---SASKDRK-------GWP 412
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEV 415
A+E + +LA+ AL + +L+ ++R + TL LE+
Sbjct: 413 QALEEVKE-KELAMSALGALLCYLQTLKIDREL--------------------TLLNLEI 451
Query: 416 LRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSY 475
N+S+G GTL ++N +T +G R+ + WV HPL D + I+ARLDAV + + G
Sbjct: 452 FANSSDGGPTGTLFSLLNRCITPFGKRMFKLWVCHPLADSDKINARLDAVESLNSNNG-- 509
Query: 476 RTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV 535
+ +T L + PD++R I+RI ++ ++F+ V
Sbjct: 510 -------------------------FQDAFVTHLNKMPDLERLISRIHAGSSRATDFLRV 544
Query: 536 MQAILYAGKQLQQLHIDGEYREKVTSKTLHS---ALLKRLILTASSPAVIGKAAKLLSTV 592
++ +Q+ R+ + TL+S L+ +L+ S P + + +
Sbjct: 545 LEG-------FEQI------RDAIDEITLYSVGGGLIGQLL--TSMPDLKRSLKQWEAAF 589
Query: 593 NKEAA-DQGDLLNLMIISNGQFSEVARARKAVQSA-KEELDSLINMCRKQLGMRNLEFMS 650
++E A QG L++ G + ++ ++ EL+SL+ + L R++++
Sbjct: 590 DREKAKSQG----LLVPERGVELDFDTSQDVIEDIINVELESLLTEYKSSLKSRDIKYTD 645
Query: 651 VSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+LIE+P F +P +W +++ T+K R++SPEV + L A E + + +
Sbjct: 646 SGKEIYLIEVPVKFARNIPKSWTQMSGTQKVKRFYSPEVKKLVRSLQEAQETHSQIVKEV 705
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIHICS 766
F + F Y + AV+ +A LDCL +LA + S + RP FV+ V +
Sbjct: 706 AGRFYERFDRDYQTWLGAVKIVANLDCLLSLARSSTSLGETSCRPTFVEGERSV-LDFTE 764
Query: 767 GRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
RHP + + + D+F+PND L + ++TG N GKS +R + IMAQ+G FVP
Sbjct: 765 LRHPCMVSSV-DDFIPNDIQLGGDSPKLGLLTGANAAGKSTVLRMTCVGVIMAQIGCFVP 823
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
+ SA L +D I +R+GA+D+I +STF EL+E IL T SLVI+DELGRGTS+
Sbjct: 824 SKSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPHSLVILDELGRGTSS 883
Query: 887 HDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMD 946
+DGVA+A + L ++ C+ F THY +A ++F G H K M
Sbjct: 884 YDGVAVAQSVLHHVATQIGCLGFFATHYHSLA---SEFIG-----HPE--IQPKRMQIHV 933
Query: 947 SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+ ++D+T+LYK+ GV+E SFG A + + I RA A E +SR+++
Sbjct: 934 DEENRDITFLYKLEAGVAEGSFGMHCAAMCGINKRIIDRAEDAARSFEH--TSRLKD 988
>gi|151554455|gb|AAI49795.1| MSH3 protein [Bos taurus]
Length = 361
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 215/331 (64%), Gaps = 8/331 (2%)
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
STK R+HSP ++ L E+L + C A W +FL+ F +Y AV LA +D
Sbjct: 2 STKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLAFLENFNEHYHTLCKAVHHLATID 61
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAERE 792
C+ +LA +++ +++ RP E +I I +GRHPV+D +L D FVPN T+L + E
Sbjct: 62 CILSLAKVAKQRDYCRPTL---QEERKILIKNGRHPVIDVLLGEQDQFVPNSTDLSGDSE 118
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNMGGKS YI+QVALI +MAQ+GS+VPA A + ++DGI+TRMGA+D+I +G+
Sbjct: 119 RVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQ 178
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF+EEL + + I+R T QSLVI+DELGRGTSTHDG+AIAYATL++ + K + LFVT
Sbjct: 179 STFMEELTDTAEIIRKATPQSLVILDELGRGTSTHDGIAIAYATLEHFIRDVKSLTLFVT 238
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ---DVTYLYKVVPGVSESSFG 969
HYP + +++ ++ VG YH+ +L + + DQ V +LY++ G++ S+G
Sbjct: 239 HYPPVCELEKSYSQQVGNYHMGFLVNEDESKQDAGEEDQVPDSVIFLYQITRGIAARSYG 298
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
VA+LA +P + +A + +LE V+ +
Sbjct: 299 LNVAKLADVPGEILKKAASKSKELEGLVNMK 329
>gi|255936397|ref|XP_002559225.1| Pc13g07990 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583845|emb|CAP91868.1| Pc13g07990 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1207
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 257/961 (26%), Positives = 434/961 (45%), Gaps = 112/961 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P T+ P S +++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 294 PDYDPRTIYIPPLAWS------RFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 347
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK------AHG 179
++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 348 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREREGKK 407
Query: 180 PGKAGP-FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGV 236
P K R L+ + T TL V G +D S Y CV I+ G+
Sbjct: 408 PTKDDKIIKRELACVLTAGTL-----VEGSMLQDDM---STY--CVA--------IKEGI 449
Query: 237 FGDGFDVR--LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQT 293
D R G+ V+ +TG EF D + E + P ELLL + +S++
Sbjct: 450 ----VDERPAFGIAFVDTATGQFFMSEFVDDVDLTKFETFVAQTRPRELLLEKSCVSQKA 505
Query: 294 EKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 353
++L P + R+ + L E+ + E +S ++D PE
Sbjct: 506 MRILKNNTDPTTIWNFMKPGREFWESDITLREL-----DASEYFVSVDDDNLAAWPE--T 558
Query: 354 HRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTL 410
R A E +L + A +++L+ +ER ++ +G + + + + L TL
Sbjct: 559 LRQARE-----KELLMSAFGALVQYLRMLKIERDLITIGNFTWYDPIKKATSLVLDGQTL 613
Query: 411 QQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE 470
+E+ N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 614 INMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDSKKINARLDAV----- 668
Query: 471 SMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPS 530
D N+D P SS LT + PD++R I+RI
Sbjct: 669 --------------DSLNAD-----PSTRDQFSSQLTKM---PDLERLISRIHAGNCKAQ 706
Query: 531 EFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLS 590
+F+ V++ +Q+ ++ + + S + + LT + P + +
Sbjct: 707 DFVRVLEG-------FEQIDYTMGLLKESDTGSGESIIGQ---LTTAMPDLASLLGYWKT 756
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
++ A + +L + +G + +++ ++ +LD+L+ R+ LG + +
Sbjct: 757 AFDRPKAKENGIL---VPESGVEEDFDNSQENIEQLHRDLDTLLKKARRDLGSSAICYRD 813
Query: 651 VSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW 709
+ +E+P K +P +W ++++TK+ RY+ PE+ + + +L A E + + +
Sbjct: 814 NGKEIYQLEVPIKVKNIPKDWNQMSATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVA 873
Query: 710 DSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSG 767
F F +Y+ + AAV+ ++ LDCL +LA S RPVFVDD V +
Sbjct: 874 GRFHARFDEHYSTWLAAVRIVSQLDCLISLAKASAAIGHPSCRPVFVDDERSV-LEFEEL 932
Query: 768 RHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPA 827
RHP L + + D F+PND L + ++TG N GKS +R + IMAQ+G ++P
Sbjct: 933 RHPCLLSSVED-FIPNDIQLGGKHASIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPC 991
Query: 828 SSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTH 887
SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++
Sbjct: 992 QSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSY 1051
Query: 888 DGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
DGVA+A A L ++ H + F THY +A + + K M
Sbjct: 1052 DGVAVAQAVLHHIATHIGALGFFATHYHSLA----------AEFENHPEIAPKRMAIHVD 1101
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
++ V +LYK+ GV+E SFG A + +P I A A + E +SR++ +
Sbjct: 1102 DVERRVAFLYKLEDGVAEGSFGMHCASMCGIPSKVIECAENAAQQWEH--TSRLKESLER 1159
Query: 1008 R 1008
R
Sbjct: 1160 R 1160
>gi|291459239|ref|ZP_06598629.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418493|gb|EFE92212.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 078
str. F0262]
Length = 900
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 261/924 (28%), Positives = 428/924 (46%), Gaps = 139/924 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNF 140
KK++P+ QQ ++ K +YPD LL +G + F EDA+ A++ L G
Sbjct: 3 EKKFSPMMQQYLDSKKEYPDALLFYRIGDFYEMFFEDAKKASEALDLVLTGKDCGGGERA 62
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLE 200
IP + ++ RLV+ G+KV + +Q E + G R + + T TL
Sbjct: 63 PMCGIPYHAADSYIARLVSRGYKVAIAEQMEDPKLAK------GLVKREVIRVVTPGTLT 116
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ V+D+ N +F DG R GV +ISTG+ +
Sbjct: 117 SE------------------SVLDERKN--NFLMSIFYDG--ARFGVSTADISTGEFLCT 154
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ + R L + SP E++ S + +E
Sbjct: 155 DCGE---RGELLDEISRFSPREIVCNHSFM-------------ISGMEIE---------- 188
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL----ALTI 376
L E SL D++ E N D + + + + GI + D ++ L AL+
Sbjct: 189 -ELRERFSLLVTELSDSVFQEE--NADRLLERHFHATLSGI-GLSDRELEKLSAAGALSY 244
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
+ Q G + A+ R S M L + + + LE+ + G+LL +++ T
Sbjct: 245 IYETQKG---SVSHIANIRRYQSSQFMILDSASQRNLELTETLREKKKRGSLLWVLDRTR 301
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G+RLLRR++ PL D I R DAV E+ Y E + ++
Sbjct: 302 TAMGARLLRRFLEQPLIDVGEIRRRQDAVEELC---SHYIEREELSEY------------ 346
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
L+++ D++R + RI +++A P + +A Q+ L + + R
Sbjct: 347 -----LNTIY-------DLERLLGRISYQSANPRDLLAFKQS----------LRLLPDIR 384
Query: 557 EKVTSKTLHSALLKRLILTASSPA----VIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
++++ HS L++ + + +I +A L+ A D G +I G
Sbjct: 385 QQISG--FHSELIREIYEEMDELSDLYQLIDEA--LVEDPPLSARDGG------LIREGY 434
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNW 670
E R A + KE L L + R++ G+++L + IE+ +FK VP +
Sbjct: 435 HEEADHFRLARKKGKEWLAELESSEREKTGIKSLRIRYNRIFGYCIEVSNSFKNLVPDYF 494
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + RY + + +++ A E+L + + Q + + +
Sbjct: 495 IRKQTLTGAERYTTDRLEELQNEILGAEEKLNALEYGIFCQLRDRIAENIPRVQKSSREI 554
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHA 789
A LDC+ +L+ ++ + +VRP + +I I GRHPV++ +L + FV NDT L
Sbjct: 555 ALLDCMLSLSRVAAERGYVRPKI---NSEGRIRIREGRHPVVERLLREGMFVSNDTLLDK 611
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
E IITGPNM GKS Y+RQVALI +MA +GSFVPA A++ V D I+TR+GASD +
Sbjct: 612 GEERISIITGPNMAGKSTYMRQVALIVLMASIGSFVPAEEADIAVCDRIFTRVGASDDLA 671
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
G+STF+ E+NE + ILRN +A SL+I+DE+GRGTST DG++IA+A ++YL + K L
Sbjct: 672 SGQSTFMVEMNEVANILRNASADSLLILDEIGRGTSTFDGLSIAWAVVEYLSQMVKAKTL 731
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ +++ + G V Y V+ SK D+D+ +L K++PG ++ S+G
Sbjct: 732 FATHYHELTELEGRLPG-VNNYCVAV-----------SKHDEDIIFLRKIIPGGADQSYG 779
Query: 970 FKVAQLAQLPPSCISRATVIAAKL 993
VA LA +P I RA I+ +L
Sbjct: 780 IDVAGLAGVPSPVIERAKEISREL 803
>gi|383810732|ref|ZP_09966220.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 306
str. F0472]
gi|383356580|gb|EID34076.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 306
str. F0472]
Length = 886
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 264/934 (28%), Positives = 448/934 (47%), Gaps = 138/934 (14%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------AHLDHN 139
+K TP+ +Q +K ++PD +L+ G + +GEDA +A+VLGI L +
Sbjct: 5 DKGLTPMMKQFFSMKAQHPDAMLLFRCGDFYETYGEDAVESARVLGITLTRRNNGGLSGS 64
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 65 IEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREAIKGKKGLSAMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + +++V + E+N+L + + GK GV ++I
Sbjct: 125 LVTPG-VALSDNVLNYK-----ENNFLAAL-----HFGK-----------SACGVSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E + S P E+L + + E+ Y G R+
Sbjct: 163 STGEFLTGEGTFDYV----EKLFGSFQPKEVLFDRSKRRDFER----YFG----TRLCTF 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D ++ A L ++ G L + V N A I+ DL
Sbjct: 211 EMDDWVFTDQTAR-QKLLKHFGTKNL-----KGFGVEHLSNGVIAAGAILQYLDLTQHT- 263
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
I H+ S + + + T++ LE++ + G +LL+++
Sbjct: 264 --QINHI------------TSLTRIEEDKYVRMDRFTVRSLELVAPMNEGG--SSLLNVI 307
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
++T+T G R+LRRWV PL D +I+ RLD V +R S D +N+
Sbjct: 308 DNTITPMGGRMLRRWVVFPLKDVAVINERLDIVDHF------FRAS------DFRNN--- 352
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
++ QF+ + D++R I+R+ +P E + + A L+ + +
Sbjct: 353 -IDEQFHQM-----------GDLERIISRVAVGRVSPREVVQLKNA-------LKAIELV 393
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+K+L+ + ++L L AS + + K ++ + +GD +I++G
Sbjct: 394 KAECLSTNNKSLNR-IGEQLNLCAS---LRDRIEKEINVDPPQLVAKGD-----VIASGY 444
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFK--VPL 668
E+ R + K+ L + Q G+ +L+ F +V G + +E+ FK VP
Sbjct: 445 DKELDDLRSIRDNGKQYLLEIQEKEIAQTGISSLKVGFNNVFG--YYLEVRNTFKNKVPE 502
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
+W + + + RY +PE+ +++ A+E++ + +++ + + Q
Sbjct: 503 DWIRKQTLAQAERYITPELKEYEEKILGADEKILAREGQLFMELIQDMQSFIPQIQVNAN 562
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTN 786
+A LDCL + ++ +++VRP VD+ + + IH GRHPV++T L + +VPND
Sbjct: 563 LVAHLDCLLSFMKIALQQHYVRPT-VDESDVLDIH--QGRHPVIETQLPIGEQYVPNDVK 619
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L E + +ITGPNM GKS +RQ ALI ++AQ+G FVPA A + ++D I+TR+GASD
Sbjct: 620 LDTEHQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAERARIGIVDKIFTRVGASD 679
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
+I G STF+ E+ EA+ IL N T +SLV+ DELGRGTST+DG++IA+A ++YL EH K
Sbjct: 680 NISLGESTFMVEMTEAANILNNVTTRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPKA 739
Query: 907 M--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
LF THY ++ +++ F+ + Y+VS + D + +L K+ G S
Sbjct: 740 QARTLFATHYHELNEMEKNFS-RIKNYNVSV-----------KEVDGKIIFLRKLTRGGS 787
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
E SFG VA++A +P S + RA VI +LEA+ S
Sbjct: 788 EHSFGIHVAEIAGMPRSIVKRANVILKELEADNS 821
>gi|403411535|emb|CCL98235.1| predicted protein [Fibroporia radiculosa]
Length = 1254
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 277/992 (27%), Positives = 432/992 (43%), Gaps = 153/992 (15%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P +P P TL +P + K++TP E+Q E+K + D +L + G + ED
Sbjct: 316 PGEPGYDPRTLY-VPAKAW-----KEFTPFEKQFWEIKQNHFDTILFFQKGKFLELYEED 369
Query: 123 AEMAAKVLGIYAHLDHNFMT---ASIPTFRLNVHVRR--------LVNAGFKVGVVKQTE 171
A + + D F ++ + RL R L A +KVG V Q E
Sbjct: 370 ARIG------HTEFDLKFTREPLTAVESDRLAFRRCRSIFGPPNSLQKAWYKVGRVDQAE 423
Query: 172 TA-----------------AIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGG 214
TA ++ A K R L+ +YT TL AE + + G
Sbjct: 424 TALGAEMRLAADKKGGKTKSVAAEDKAKDKIVRRELNKVYTNGTLVDAELLTDEQAGH-- 481
Query: 215 ESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAV 274
CV + ++ ++G G G+ ++ ST + F D R+ LE +
Sbjct: 482 ------CVSIREEDIEADKDGRQG------FGICVLDSSTSEFNLSTFEDDVCRTRLETM 529
Query: 275 LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMG 334
+ L P E++ + + LL P + + + L E+ L+
Sbjct: 530 MRQLRPKEIIFTKGNLSVSTTRLLKVILPGNCLWTSLRESEGLAYEKTLKELTRLFPA-- 587
Query: 335 EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
+D N D+ +I G+ + A++ +A + ++L +++ + +F
Sbjct: 588 -------DDDNADL-------HSIHGLTDTVPTAIRDVAGS-KYLNTLNIDKDILSMKNF 632
Query: 395 R---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHP 451
+ + L TL +EVL N S G+E G+LL ++ +T G RL R W+ P
Sbjct: 633 NIYDPMKRGQGLVLDGQTLAHIEVLLN-SEGTEEGSLLKQLSRCITPSGKRLFRIWLCMP 691
Query: 452 LCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGR 511
L + + I+ARLDAV ++ + P F + + L
Sbjct: 692 LREVSDITARLDAVQDLLD------------------------HPTFEQDFTKIAKGL-- 725
Query: 512 SPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKR 571
PD++R ++RI + +F+ V++A L +L + E SKT+
Sbjct: 726 -PDLERVVSRIHAKNCKVKDFLKVLEAFKGLSVGLAEL---ADTAESFQSKTI------- 774
Query: 572 LILTASSPAVIGKAAKLLSTVNK--EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEE 629
L L S+P ++ + S K E+AD+ +I +G+ + +Q + E
Sbjct: 775 LGLLRSAPNLLPNLKHVKSMFKKSGESADE------LIPEDGKDEAFDEVMEEIQVLETE 828
Query: 630 LDSLINMCRKQLGMRNLEFMSVSGIT--HLIELPANFKVPLNWAKVNSTKKTIRYHSPEV 687
LD + K++G++ + S G +L++ A+ VP +W K TK RY P +
Sbjct: 829 LDDALKRLEKKVGIKLSYWHSAQGTKEIYLVQTKASEDVPRDWTKSGGTKAVTRYIVPFL 888
Query: 688 LTALDQLALANEELTIVCRAAWDSFLKEFGG-YYAEFQA-------AVQALAALDCLHAL 739
+ +L A E V +KEF YAEF A AV+ LA LDCL +L
Sbjct: 889 APTIRKLKEARENRNTV--------VKEFKARLYAEFDADRSVWLRAVRVLAELDCLFSL 940
Query: 740 ATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLD--TILLDNFVPNDTNLHAEREYCQ 795
A S + RP FV+ + RHP L T L +F+PND L
Sbjct: 941 AKASSALGEPCCRPEFVE-GDTAWFDFEELRHPALSIATGLRGDFIPNDVKLGDGVGRLA 999
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
++TGPNMGGKS +R A IMAQ+G VPA A L +D I TRMGA D++ STF
Sbjct: 1000 LLTGPNMGGKSTAMRMTATGVIMAQLGMLVPARRARLCPVDSILTRMGAYDNMFSSASTF 1059
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
E++E ILR+ T +SLVI+DELGRGTST+DG+AIA A L L H + F THY
Sbjct: 1060 KVEMDECCKILRDATPKSLVILDELGRGTSTYDGMAIAGAVLHQLATHTLALSFFATHYG 1119
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
+ D F YH + H M + +++ +LYK+V GV+ SSFG VA L
Sbjct: 1120 SLTD---DF-----AYHPNIRNMH--METIVDDEKRELIFLYKLVEGVASSSFGTHVASL 1169
Query: 976 AQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
A +P + RA V++ +++ + K
Sbjct: 1170 AGVPSEVVERAEVVSKDFAQHFREKMEGQKNK 1201
>gi|153853167|ref|ZP_01994576.1| hypothetical protein DORLON_00561 [Dorea longicatena DSM 13814]
gi|149753953|gb|EDM63884.1| DNA mismatch repair protein MutS [Dorea longicatena DSM 13814]
Length = 876
Score = 297 bits (760), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 259/931 (27%), Positives = 438/931 (47%), Gaps = 145/931 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
QQ ++ K +YPD +L +G + F +DA A+K L G L+ +P
Sbjct: 3 QQYMQTKKEYPDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLEERAPMCGVPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT---LEAAEDV 205
++ ++ RLV+ G+KV + +Q E A G R + + T T +A ++
Sbjct: 63 AVDGYLNRLVSKGYKVAICEQMEDPATAK------GLVKRDVVRIVTPGTNLDTQALDET 116
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
++NY++C+ D + GV ++STG+ + E +
Sbjct: 117 ---------KNNYIMCI------------AYASDHY----GVSVADVSTGEYMVTEIENS 151
Query: 266 FLRSGLEAVLLSLSPAELLLGQP--LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + P+EL+ + +S ++L G + S D + A+
Sbjct: 152 ---EKLFDEIYKFMPSELICNEAFYMSGMDFELLKEKLG------ITVYSLDSWYFDDAI 202
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHLKQF 382
E + ++ H IEG+ + D V A +++L +
Sbjct: 203 CE---------------------RILKEHFHAGTIEGLGLADYDCGVIAAGALMQYLVET 241
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
+R + + + M L ++T + LE+ + + G+LL +++ T T G+R
Sbjct: 242 Q-KRDLSHISHLTIYAAGKYMLLDSSTRRNLELCETLRDKQKRGSLLWVLDKTKTAMGAR 300
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LR+++ PL D+N I RLDAV E+ M + + E + ++ L
Sbjct: 301 TLRKYIEQPLIDKNAIEKRLDAVDEL---MKNAISREEIREY-----------------L 340
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
S V D++R + +I +++A P + IA ++ HI K
Sbjct: 341 SPVY-------DLERLVCKITYQSANPRDLIAFQTSLAMLP------HI------KCILS 381
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVAR 618
+ + LLK L + + KL+S +E A +G II +G +EV +
Sbjct: 382 DMQTPLLKELYEELDT---LEDLCKLVSDSIREDPPIAMKEGG-----IIKDGYNAEVDK 433
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNST 676
R A K+ L L R++ G++NL + +E+ +FK VP + + +
Sbjct: 434 LRNAKSDGKDWLAKLETDEREKTGIKNLRIKYNKVFGYYLEVTNSFKDLVPDYYTRKQTL 493
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
RY PE+ D + A ++L + + G Q +A+A LD
Sbjct: 494 ANAERYIIPELKELEDTILGAEDKLYALEYQLYSEVRDTIGKEVVRIQKTAKAIAKLDAF 553
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREYCQ 795
+LA ++ N+VRP D I I GRHPV++ ++ D F+ NDT L+ +++
Sbjct: 554 ASLALVAEQNNYVRPKMNDKG---LIDIKDGRHPVVEKMISNDMFICNDTYLNDKKDRIS 610
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
IITGPNM GKS Y+RQ ALI +MAQ+GSFVPASSA + V+D I+TR+GASD + G+STF
Sbjct: 611 IITGPNMAGKSTYMRQTALIVLMAQIGSFVPASSANIGVVDRIFTRVGASDDLASGQSTF 670
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFVTH 913
+ E+ E + ILRN T++SL+I+DE+GRGTST DG++IA+A ++Y+ K LF TH
Sbjct: 671 MVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVIEYISNSKLLGAKTLFATH 730
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ +++ K +V Y ++ + K D D+ +L K+V G ++ S+G +VA
Sbjct: 731 YHELTELEGKIE-NVNNYCIA----------VKEKGD-DIIFLRKIVKGGADKSYGIQVA 778
Query: 974 QLAQLPPSCISRATVIAAKL-EAEVSSRVQN 1003
+LA +P S RA I +L +A+V+ R+++
Sbjct: 779 RLAGVPQSVTDRAKEIVEELVQADVTGRIKD 809
>gi|347840481|emb|CCD55053.1| similar to DNA mismatch repair protein msh6 [Botryotinia fuckeliana]
Length = 1213
Score = 297 bits (760), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 258/969 (26%), Positives = 414/969 (42%), Gaps = 133/969 (13%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P TL P + +TP E Q ++K K D +L + G + + D
Sbjct: 287 PGHPDYDPRTLFIPPMAFNN------FTPFEAQYWKVKQKCWDTILFFKKGKFYELYERD 340
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK------ 176
A + ++ + N +P L + + G+KV V Q E+A K
Sbjct: 341 ATIGHQIFDLKLTDRVNMSMVGVPEMSLQHWANQFLAKGYKVAVGDQKESALAKEMRERE 400
Query: 177 -AHGPGKAGP-----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVG 230
+ GP G R LS + T TL + G + CV
Sbjct: 401 DSTGPSSKGKKSDKIIHRELSYILTAGTLVEGSMLQG--------DSATYCVA------- 445
Query: 231 KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-L 289
I+ D G+ V+ STG EF D + E + P ELLL + +
Sbjct: 446 -IKESTTNDDLPA-FGISFVDTSTGQFFLTEFTDDVDLTKFETFVAQTRPQELLLEKSCV 503
Query: 290 SKQTEKMLLAYAGPAS----------NVRVECASRDCFIGGGALAEVMSLYENMGEDTLS 339
S + ++L GP + + E + R+ GG + + G++T
Sbjct: 504 STKVLRILKNNTGPTTIWNYLKPEKEFLSAEKSRRELDYGGYFTSA------DGGKETWP 557
Query: 340 NNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF---RS 396
++ D DL + A ++LK LE+ + +F
Sbjct: 558 EELEKARD-----------------KDLLISAFGALFQYLKFLQLEKPLLTQGNFSWYNP 600
Query: 397 LSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRN 456
+ + L TL LE+ N +G+ GTL +++ T +G RL R+WV+HPL D
Sbjct: 601 IQKGTTLVLDGQTLINLEIFSNTFDGNSDGTLYTLLDRCTTPFGKRLFRQWVSHPLSDIK 660
Query: 457 LISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQ 516
I+ RLDAV D N D + S +S PD++
Sbjct: 661 RINERLDAV-------------------DFLNRDNELSR--------SFKSSTSAMPDLE 693
Query: 517 RGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID--GEYREKVTSKTLHSALLKRLIL 574
R I+RI + P +F+ V++ +Q++ + D G+Y + + RL+
Sbjct: 694 RLISRIHAGSCRPEDFVKVLEGF----EQIEYIQKDILGKY-------SSGDGIFNRLV- 741
Query: 575 TASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLI 634
AS P + + +++ A + +L + G + ++ ++ +EL SL+
Sbjct: 742 -ASIPDLAEPLQWWKTAFDRKKAKEHKIL---VPERGVEEDFDASQDRIEEINQELASLL 797
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
+K+ + +E S+ H +++P + KVP +W ++ RY+ PE+ + L
Sbjct: 798 KKYQKKFDSKKVELKSIGKEIHQLQVPVSIKVPKDWKVTSAASGFKRYYFPELTNIIRDL 857
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPV 752
E + + F F Y + AV+ +A LDCL +LA S RP
Sbjct: 858 QETQETHGQIVKEVASRFYARFDEDYKTWLQAVKVVAQLDCLVSLAAASSALGTTSCRPK 917
Query: 753 FVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQV 812
FVD V + RHP + + D F+PND L + ++TG N GKS +R
Sbjct: 918 FVDSERSV-VEFEELRHPCVLPNVTD-FIPNDVQLGGQSPNINLLTGANAAGKSTILRMT 975
Query: 813 ALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQ 872
+ IMAQ+G +VPA SA L +D I +R+GA+D+I +STF EL+E IL T +
Sbjct: 976 CVAVIMAQLGCYVPAKSATLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPR 1035
Query: 873 SLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYH 932
SLVI+DELGRGTS++DGV++A A L ++ H C+ F THY +A +F H
Sbjct: 1036 SLVILDELGRGTSSYDGVSVAQAVLHHVASHIGCIGFFATHYHSLA---LEFDS-----H 1087
Query: 933 VSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAK 992
+ + +D++S + V +LYK+ GV+E SFG A + +P + RA V A
Sbjct: 1088 PEVINKRMAI-EVDNES-RSVLFLYKLENGVAEGSFGMHCASMCGIPRKVVDRAEVAAR- 1144
Query: 993 LEAEVSSRV 1001
E E +SR+
Sbjct: 1145 -EWEFTSRL 1152
>gi|453088772|gb|EMF16812.1| DNA mismatch repair protein msh6 [Mycosphaerella populorum SO2202]
Length = 1202
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 264/1012 (26%), Positives = 428/1012 (42%), Gaps = 128/1012 (12%)
Query: 17 SNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVV--SSLFP---------PKTPKK 65
+ Q T A P P++ PP K + + K V S +P P
Sbjct: 229 ATQWTHDPDAPRPTEPRKLPPMKKSTAGAARKQKAHVTEPSDRYPWLAEIHDADRNPPDH 288
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P T+ P + K++ E+Q E+K K+ D ++ + G + + DA +
Sbjct: 289 PDYDPRTIYIPPMAWN------KFSAFEKQYWEIKQKFWDTIVFFKKGKFYELYENDATI 342
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK--------- 176
++ + N +P L+ + V GFK+ V Q E+ K
Sbjct: 343 GHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAKGFKIARVDQMESKLGKDMRERSDDN 402
Query: 177 AHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGV 236
+ R L+++ T TL E + C + V N
Sbjct: 403 KKAKKEEKIIRRELASVLTAGTLV--------EGSMLTDDLATYCAAIKESEVDGKPN-- 452
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
G+ V+ +T E+ D + E + + P ELLL + +S + +
Sbjct: 453 --------FGIAFVDTATAQFQLAEWVDDVDMTRFETFVAQIRPGELLLEKGCISAKAMR 504
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEV--MSLYENMGEDTLSNNEDQNMDVPEQGN 353
+L P + ++ ++ + +E ED ++N + + +
Sbjct: 505 ILKNNTSPTAIWNYLKPDKEFLTADKTRMKINGEAYFETSDEDESADNWPKVLSEAKDK- 563
Query: 354 HRSAIEGIMNMPDLAVQALALTIRHLKQFGLER--IMCLGAS-FRSLSGSMEMTLSANTL 410
DL AL +L +ER I C S + + + + L +L
Sbjct: 564 ------------DLVFSALGALTWYLSLLKIERDLITCGNFSWYDPIRKASSLVLDGQSL 611
Query: 411 QQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE 470
LE+ N +GS GTL ++N +T +G R+LR+WV HPL D I+ RLDAV
Sbjct: 612 INLEIFANTFDGSTEGTLFTMLNRCITPFGKRMLRQWVCHPLADARKINQRLDAV----- 666
Query: 471 SMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPS 530
D N+D T+++ +SL + PD++R I+R+ P
Sbjct: 667 --------------DALNADGTVMD--------RFTSSLSKLPDLERLISRVHAGRCKPQ 704
Query: 531 EFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLS 590
+F+ V+Q + L GE LL +LI ++ P + G
Sbjct: 705 DFVKVLQGFEQIEYTMSLLRKFGE----------GEGLLGQLI--SAMPDLAGALKHWAE 752
Query: 591 TVN-KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ K+A D G L I G + +++ + + L+ L+ RK L + ++F
Sbjct: 753 AFDRKQATDDG----LFIPQPGVEEDFDESQQRIDDVIQRLNQLLKKARKDLDSQAIKFT 808
Query: 650 SVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRA 707
+ +E+P K +P NW ++++TK+ R++SPE+ + + L A E V +A
Sbjct: 809 DNGKEIYQLEIPIKVKGNIPKNWKQMSATKQCKRWYSPELESLVQDLKEAQEMHAQVVKA 868
Query: 708 AWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEP---VQI 762
F F YA + AA + +A LDCL +LA S + RP F+DD +
Sbjct: 869 LAGRFFARFDEDYATWLAATKIIAQLDCLISLARASSSLGSPSCRPEFIDDENARSVLDF 928
Query: 763 HICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVG 822
I RHP ++T NF+PN +L ++ ++TG N GKS +R + I+AQ+G
Sbjct: 929 QIL--RHPCIETTT--NFIPNTISLGGDQASITLLTGANAAGKSTILRMTCVAVILAQIG 984
Query: 823 SFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGR 882
+VP SA L +D I +R+GA D+I G+STF+ EL+E IL T +SLVI+DELGR
Sbjct: 985 CYVPCESARLTPVDRIMSRLGAHDNIFAGQSTFMVELSETKKILAEATPRSLVILDELGR 1044
Query: 883 GTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVM 942
GTS++DGVA+A A L ++ H + F THY +A + K M
Sbjct: 1045 GTSSYDGVAVAQAVLHHVATHVGSLGYFATHYHSLA----------AEFQQHPEVVAKRM 1094
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+DVT+LY++ GV+E S+G A + +P I RA V A E
Sbjct: 1095 AVKVDDDVRDVTFLYELENGVAEGSYGMHCAAMCGIPKKVIDRAEVAAQSWE 1146
>gi|425779081|gb|EKV17171.1| DNA mismatch repair protein Msh6, putative [Penicillium digitatum
PHI26]
Length = 1222
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 252/946 (26%), Positives = 427/946 (45%), Gaps = 108/946 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P T+ P S K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 309 PDYDPRTVYIPPLAWS------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 362
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK------AHG 179
++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 363 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREREGKK 422
Query: 180 PGKAGPF-GRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGV 236
P K R L+ + T TL V G +D S Y CV I+ +
Sbjct: 423 PTKEDKIIKRELACVLTAGTL-----VEGSMLQDDM---STY--CVA--------IKEAI 464
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
+ G+ V+ +TG EF D + E + P ELLL + +S++ +
Sbjct: 465 VDEHH--AFGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPRELLLEKSCVSQKAMR 522
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
+L GP + ++ + + E+ + E +S ++D PE
Sbjct: 523 ILKNNTGPTTIWNFMKPGKEFWESEITIRELEA-----SEYFVSADDDNLTAWPETLRQA 577
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQ 412
E +M+ A +++L+ +ER ++ +G + + + + L TL
Sbjct: 578 REKEFLMS-------AFGALVQYLRMLKIERDLITIGNFTWYDPIKKATSLVLDGQTLIN 630
Query: 413 LEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESM 472
+E+ N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 631 MEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDSKKINARLDAV------- 683
Query: 473 GSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF 532
D N+D P SS LT + PD++R I+RI +F
Sbjct: 684 ------------DSLNAD-----PSARDQFSSRLTKM---PDLERLISRIHAGNCKAQDF 723
Query: 533 IAVMQAILYAGKQLQQL-HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
+ V++ +Q+ +I G +E T +++ +L TA+ P + +
Sbjct: 724 VRVLEG-------FEQIDYIMGLLKESETGSG--ESIIGQL--TAAMPDLASLLGYWKTA 772
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSV 651
++ A + +L + +G + +++ ++ +LD+++ R+ LG + +
Sbjct: 773 FDRPKAKENGIL---VPESGVEEDFDNSQEIIEQLHRDLDAMLKKARQDLGSSAICYRDN 829
Query: 652 SGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ +E+P K +P +W ++++TK+ RY+ PE+ + + +L A E + + +
Sbjct: 830 GKEIYQLEVPIKVKNIPKDWNQMSATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAG 889
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGR 768
F F +Y + AAV+ ++ LDCL +LA S RPVFV+D V + R
Sbjct: 890 RFHARFDEHYDTWLAAVRIVSQLDCLISLAKASGAIGHPSCRPVFVEDERSV-LEFEKLR 948
Query: 769 HPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
HP L + + D F+PND L ++TG N GKS +R + IMAQ+G ++P
Sbjct: 949 HPCLLSSVED-FIPNDIQLGGNHASIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQ 1007
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++D
Sbjct: 1008 SARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYD 1067
Query: 889 GVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
GVA+A A L ++ H + F THY +A + + K M
Sbjct: 1068 GVAVAQAVLHHIATHIGALGFFATHYHSLA----------AEFENHPEIAPKRMAIHVDD 1117
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ VT+LYK+ GV+E SFG A + +P I A A + E
Sbjct: 1118 VERRVTFLYKLENGVAEGSFGMHCASMCGIPSKVIECAENAAKQWE 1163
>gi|363899230|ref|ZP_09325740.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB1]
gi|395209621|ref|ZP_10398715.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB8]
gi|361959067|gb|EHL12363.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB1]
gi|394705252|gb|EJF12781.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB8]
Length = 902
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 259/917 (28%), Positives = 438/917 (47%), Gaps = 130/917 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K +P+ +Q ++ K +YPD LL +G + F +DA A+K L G L+
Sbjct: 5 KLSPMMRQYLDSKKEYPDALLFYRIGDFYEMFFDDALTASKELDLVLTGKDCGLEERAPM 64
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P + +V +LV+ G+KV + +Q E P KA G R + + T T
Sbjct: 65 CGVPYHAADSYVSKLVSKGYKVAIGEQVED-------PKKAKGLVKREIIKVITPGT--Q 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
E+ E G++N+L+ + +G+ + G+ V V+I+TG+
Sbjct: 116 TEETALEE----GKNNFLMSIY-----LGEKKRGI-----------VTVDITTGECYATA 155
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ + L+ + SP E+L+ L ++ E L + ++ + F
Sbjct: 156 VDSS--KECLDEIS-RFSPKEILINPSLKEEEE--LFSQINSRFSISLTEKEERFF---- 206
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+L E L + ++ + + +Q + R A+ G ++ + L IR +
Sbjct: 207 SLTEADKLITAHFQSSI-----MGLGLSDQADLRRALGGCLSYLYDTQKNLLTHIRRIDF 261
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
F + M + + S L+ E LR + GTLL ++++T T GS
Sbjct: 262 FQNKDYMVVD------------SYSQRNLELWETLREKK---KRGTLLWVLDYTKTAMGS 306
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R+LR ++ PL D+ I ARLDAV E G Y E + ++
Sbjct: 307 RMLRHFLERPLRDKKKIEARLDAVEEFT---GHYIDMEELREY----------------- 346
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L S+ DI+R ++RI TA + +A+ ++ Y + L
Sbjct: 347 LDSIY-------DIERLLSRISLSTANARDLLALKLSLQYLPDIKKALS----------- 388
Query: 562 KTLHSALLKRLILTASS-PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS-EVARA 619
S+LL ++ S + K + + + +G L+ FS +V
Sbjct: 389 -PFQSSLLSKMGEEMDSLEDIYRKIEEEIVEEPPLSVKEGGLIK------ASFSKDVEDY 441
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTK 677
R A + KE L L R++ G++NL+ + E+ ++ +P + + +
Sbjct: 442 RNAGVNGKEWLQELEAREREKTGIKNLKIKYNRIFGYCFEVSKAYQGEIPDYFIRRQTLA 501
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
+ RY + E+ +++ A E+L + A + + +E Q + LA LD
Sbjct: 502 QGERYITTELEELQNRILGAEEKLKDLEYALFCTLREEIAAELPRIQKTARELAHLDAYL 561
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYCQI 796
+LA L+ +N+VRP E + I GRHPV++ +L + +F+PNDT+L +E I
Sbjct: 562 SLAKLAIKENYVRPRL---SEGGSLFIKEGRHPVVEKLLEEEHFIPNDTSLEENQEIA-I 617
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNM GKS Y+RQVALI +++ +GSFVPA AEL + D I+TR+GASD + QG+STF+
Sbjct: 618 ITGPNMAGKSTYMRQVALIVLLSAIGSFVPAKEAELPICDRIFTRVGASDDLAQGQSTFM 677
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
E++E + ILRN T QSL+I+DE+GRGTST DG++IA+A ++Y+ H + LF THY +
Sbjct: 678 VEMSEVANILRNATKQSLLILDEIGRGTSTFDGLSIAWAVVEYIARHIQAKTLFATHYHE 737
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ +++ K +V Y ++ SK D ++++L K++PG ++ S+G VA+LA
Sbjct: 738 LTELEGKLN-NVKNYCIAV-----------SKKDGEISFLRKIIPGGADESYGIDVAKLA 785
Query: 977 QLPPSCISRATVIAAKL 993
+P +SRA I+A L
Sbjct: 786 GVPEGVLSRAREISAFL 802
>gi|260060605|ref|YP_003193685.1| DNA mismatch repair protein MutS [Robiginitalea biformata HTCC2501]
gi|88784735|gb|EAR15904.1| DNA mismatch repair protein [Robiginitalea biformata HTCC2501]
Length = 871
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 269/927 (29%), Positives = 419/927 (45%), Gaps = 150/927 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMT 142
KK TPL QQ +K +YPD LL+ VG + FG DAE AA++L I +N
Sbjct: 6 KKETPLMQQYNGIKKRYPDALLLFRVGDFYETFGADAERAAEILDIVLTQRNNGGDQTAL 65
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEA 201
A P LN ++ +LV AG +V + Q E P + RG++ L T
Sbjct: 66 AGFPHHALNTYLPKLVKAGQRVAICDQLED-------PKQTKTIVKRGVTELVTPG---- 114
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V G+D +SN + V + GK+R +G+ +++STG+ E
Sbjct: 115 ---VALGDDMLQAKSNNFLAAV----HFGKLR-----------MGISFLDVSTGEFFVSE 156
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N R + L + SP E+L+ + N R + R+ F G
Sbjct: 157 GN----RETTDKWLQNFSPKEILV------------------SKNHRTDF--REQF--GT 190
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG--IMNMPDLAVQALALTIRHL 379
A Y + ED + S+++G I PD V A A+ L
Sbjct: 191 A-------YHTFNLEDWVFQEDYARETLTGHFKTSSLKGFGIDAQPDGIVAAGAV----L 239
Query: 380 KQFGLERIMCLG--ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
G R LG R L+ + + T+Q LE+ R G +LL +++HT +
Sbjct: 240 HYLGETRHRQLGHIGGVRRLASEDYVWMDRFTMQNLELFRTRDPGGV--SLLDVVDHTRS 297
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G RLLR+W+ PL D I R +R + H E+
Sbjct: 298 PMGGRLLRQWLALPLKDLEAIRKR-------------HRIVAHLNSHPEE---------- 334
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHIDGE 554
L + L + D++R I + TP E + + +QA++ KQ +
Sbjct: 335 ----LGPMREQLRQMGDLERLIAKAAAGKITPRETVHLKNALQAVIPV-KQRAAAAAEPA 389
Query: 555 YREKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
R+ S AL +R+ +L +PA+IGK ++ G
Sbjct: 390 LRDLAGSLDDCQALRERIGAVLLEEAPAIIGKG--------------------RTVAPGF 429
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNW 670
E+ R S K+ L+ ++ +++ G+ +L+ S + + IE+ K VP W
Sbjct: 430 SEELDELRNLAGSGKDYLEQMLKREQERTGITSLKIASNNVFGYYIEVRNTHKDKVPPEW 489
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + RY + E+ ++ A E + + + + + Y A Q + L
Sbjct: 490 IRKQTLVSAERYITEELKEYEAKILGAEERILDLEQQLFAQLVVWMQEYIAPVQENARTL 549
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLH 788
A LDCL A L+ +V P D + I GRHPV++ L +++VPND +L
Sbjct: 550 ARLDCLCGFANLAGQHGYVCPEMTD---ATDLRITQGRHPVIERQLPPGESYVPNDLHLD 606
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E++ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA +A L V D I+TR+GASD+I
Sbjct: 607 REQQQILMITGPNMSGKSAILRQTALIVLLAQIGSFVPAEAARLGVTDKIFTRVGASDNI 666
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCM 907
G STF+ E+NEA+ IL N + +SL+++DE+GRGTST+DG++IA+A +YL +H +
Sbjct: 667 SLGESTFMVEMNEAASILNNLSERSLILLDEIGRGTSTYDGISIAWAIAEYLHQHPARAK 726
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ ++ F + Y+VS + V +L K+ PG S S
Sbjct: 727 TLFATHYHELNEMAGSF-ARIKNYNVSV-----------KELRDKVLFLRKLEPGGSHHS 774
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLE 994
FG VA++A +P + +A I +LE
Sbjct: 775 FGIHVARMAGMPGEVVRKAQKILVQLE 801
>gi|452989141|gb|EME88896.1| hypothetical protein MYCFIDRAFT_25225 [Pseudocercospora fijiensis
CIRAD86]
Length = 1117
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 268/1016 (26%), Positives = 427/1016 (42%), Gaps = 134/1016 (13%)
Query: 19 QTTASSSASSPRPPQQTPP---PKIAATVSFSPAKRKVVSSLFPPK-------------- 61
++TA P P T P P + + S P K++ + P
Sbjct: 141 KSTAQQWTFDPDAPPSTEPRKRPTVVKSTSNGPPKKQKAHATDPADRYPWLAAIQDADRH 200
Query: 62 TPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGE 121
TP P P TL P + ++P E+Q E+K K+ D ++ + G + +
Sbjct: 201 TPDHPDYDPRTLYVPPGAWNN------FSPFEKQYWEIKCKFWDTIVFFKKGKFYELYEN 254
Query: 122 DAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK----- 176
DA + ++ + N +P L+ + V GFK+ V Q ETA K
Sbjct: 255 DATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAKGFKIARVDQMETALGKDMRER 314
Query: 177 ----AHGPGKAGPFGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVG 230
A + R L+++ T TL V G +D + Y + + + G
Sbjct: 315 DQKGAAKKKEEKVIRRELASVLTAGTL-----VEGSMLQDDM---ATYCAAIKETESE-G 365
Query: 231 KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLS 290
K G+ V+ +T E+ D + E + P EL+L +
Sbjct: 366 K-----------PAFGIAFVDTATAQFHLAEWVDDADMTRFETFVAQTRPGELILEKGCI 414
Query: 291 KQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE 350
+L P + + F+ M+ GE +ED E
Sbjct: 415 SARALRILKNNTPPTTIWNYLKPDKEFLSADKTRMKMN-----GEAYFVKSEDD-----E 464
Query: 351 QGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF---RSLSGSMEMTLSA 407
+ + + A + +L +ER + A+F + + + L
Sbjct: 465 AADSWPKVLREAETKENTFSAYGALVWYLSMLKIERDLITCANFSWYNPIRKASSLVLDG 524
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
+L LE+ N +GS GTL ++N +T G R LR+WV HPL D I+ R DAV
Sbjct: 525 QSLINLEIFANTFDGSTEGTLFTMLNRCVTPSGKRTLRQWVCHPLADARKINERFDAV-- 582
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
D N+D T+++ SL R PD++R I+R+
Sbjct: 583 -----------------DALNADGTVMD--------RFTASLSRLPDLERLISRVHAGRC 617
Query: 528 TPSEFIAVMQA---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
+F+ V++ I Y L DGE LL +LI ++ P +
Sbjct: 618 KVQDFVKVLEGFEQIEYTMSLLSSFG-DGE------------GLLGQLI--SAMPNLQTP 662
Query: 585 AAKLLSTVN-KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+ K+A +QG L+I G + +++ V ++EL+ L+ RK LG
Sbjct: 663 LNHWKEAFDRKQAKEQG----LLIPQPGVEDDFDESQERVDGVEKELNKLLQRARKDLGS 718
Query: 644 RNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
++F + +E+P K +P NW ++++TK+ R++SPE+ + L A E
Sbjct: 719 SAIKFTDNGKEIYQLEVPIKVKGNIPKNWKQMSATKQCKRWYSPELEGLVQDLKEAQEMH 778
Query: 702 TIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFV-DDHE 758
V +A F F Y + AA++ + LDCL +LA S + RP F+ DDH
Sbjct: 779 AQVVKALAGRFFARFDEDYTTWLAAIKIIGQLDCLISLAKASSSLGSPSCRPEFIEDDHA 838
Query: 759 PVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIM 818
+ + RHP ++T NF+PND L ++ ++TG N GKS +R + I+
Sbjct: 839 RSVLEFQTLRHPCIETTT--NFIPNDIALGGDQASITLLTGANAAGKSTILRMTCIAVIL 896
Query: 819 AQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVD 878
AQ+G +VP SA + +D I +R+GA D+I G+STF+ EL+E IL T +SLVI+D
Sbjct: 897 AQIGCYVPCESARMTPVDRIMSRLGAHDNIFAGQSTFMVELSETKKILAEATPRSLVILD 956
Query: 879 ELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS 938
ELGRGTS++DGVA+A A L ++ H + F THY +A K +
Sbjct: 957 ELGRGTSSYDGVAVAQAVLHHIATHVGSLGYFATHYHSLAAEFQKHPEVIA--------- 1007
Query: 939 HKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
K M +DVT+LY + GV+E S+G A + +P I+RA A E
Sbjct: 1008 -KRMAVKVDDDIRDVTFLYHLEDGVAEGSYGMHCAAMCGIPDKVITRAEQAAENWE 1062
>gi|365135104|ref|ZP_09343629.1| DNA mismatch repair protein MutS [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613074|gb|EHL64598.1| DNA mismatch repair protein MutS [Subdoligranulum sp. 4_3_54A2FAA]
Length = 868
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 259/920 (28%), Positives = 423/920 (45%), Gaps = 128/920 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ QQ ++K ++PD +L +G + F +DA +A+K L G +
Sbjct: 5 SPMMQQYFDIKKQHPDKILFFRLGDFYEMFYDDAILASKELELTLTGRDCGQEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P +V RL+ G+KV + +Q E A+ G R + + T T+ E
Sbjct: 65 VPFHSYENYVARLIAKGYKVAICEQMEDPALAK------GLVKRDIIRVVTPGTV--IES 116
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+D ++NY+ + + G F D V G + TG+ + E
Sbjct: 117 SMLQDD----KNNYIASIYITEKKAGV----CFAD---VSTGTAHATVLTGEKLGPEIIS 165
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
R SP+E+L + E + AY VE F +
Sbjct: 166 ELCR---------YSPSEVLFNAAILDYKE--VTAYIKQQLACSVELLDEAAFAPDACME 214
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF-- 382
E+ + + + E T PE A ALA+ + +LK+
Sbjct: 215 EMRAQFGDAPEKTAGL-------APESP---------------AFTALAVLLGYLKETQK 252
Query: 383 -GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
G+ER+ + + + + M LS T LE+ + GTLL +++ T T G
Sbjct: 253 KGVERL----KTVHNYAEAQYMQLSPVTRANLELTETMRGREKKGTLLWVLDKTQTAMGK 308
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RL+R W+ PL + I+ARLD V E+ +SV + D
Sbjct: 309 RLMRAWIEQPLVNVAAINARLDGVEEL--------VGDSVARAD---------------- 344
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
+ +L + DI+R +TR + +A+P E A+ +QL +L K +
Sbjct: 345 ---IAAALSKIFDIERLMTRTVYGSASPREIYALAATC----EQLPRL--------KALA 389
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
++ SA + L+ + I + + + V++ A L + +I G +EV R
Sbjct: 390 RSFGSAEITALLADIDELSDIKEL--IFAAVDENAPAM--LKDGGVIRPGYNTEVDELRD 445
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKT 679
V K L +L +++ G+R L+ + IE+ +F +VP N+ + +
Sbjct: 446 IVHGGKGYLATLEAKLKEETGIRTLKIGYNRVFGYYIEVSRSFSNQVPANFVRKQTLANA 505
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY + ++ +++ ANE L ++ R +D L + Q +A LD L AL
Sbjct: 506 ERYITEDLKVLENKILGANERLAVLERQLFDDLLHKISAELPRIQKTASGMARLDVLTAL 565
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQIIT 798
A ++ + +PV VD+ + ++ I GRHPV++ +L FVPNDT L IIT
Sbjct: 566 AEVAVKNGYTKPV-VDEGD--ELIIEEGRHPVIEQMLKGALFVPNDTVLDCGDNRMLIIT 622
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNM GKS Y+RQ ALI +MAQ+GSFVPA + + V+D I+TR+GASD + G+STF+ E
Sbjct: 623 GPNMAGKSTYMRQTALIALMAQIGSFVPARACRMGVVDAIFTRVGASDDLAAGQSTFMVE 682
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK---KCMVLFVTHYP 915
+ E + IL+ TA+SLVI+DE+GRGTST DG++IA A ++++ + C LF THY
Sbjct: 683 MTEVAEILQYATAKSLVILDEIGRGTSTFDGMSIARAVVEHIADKDGGMGCKTLFATHYH 742
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ D++ G V Y+++ K D+T+L ++V G ++ S+G +VA+L
Sbjct: 743 ELTDLENAIDG-VKNYNIAV-----------KKRGDDITFLRRIVRGPADDSYGIEVAKL 790
Query: 976 AQLPPSCISRATVIAAKLEA 995
A LP RA + LEA
Sbjct: 791 AGLPGEVTKRAKEVLKVLEA 810
>gi|425765631|gb|EKV04301.1| DNA mismatch repair protein Msh6, putative [Penicillium digitatum
Pd1]
Length = 1222
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 251/946 (26%), Positives = 426/946 (45%), Gaps = 108/946 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P T+ P S K++P E+Q E+K K+ D ++ + G + + DA +
Sbjct: 309 PDYDPRTVYIPPLAWS------KFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATI 362
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK------AHG 179
++ + N +P L+ + V GFK+ V Q+E+A K
Sbjct: 363 GHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVVQSESALGKEMREREGKK 422
Query: 180 PGKAGPF-GRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGV 236
P K R L+ + T TL V G +D S Y V I+ +
Sbjct: 423 PTKEDKIIKRELACVLTAGTL-----VEGSMLQDDM---STYCVA----------IKEAI 464
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
+ G+ V+ +TG EF D + E + P ELLL + +S++ +
Sbjct: 465 VDEHH--AFGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPRELLLEKSCVSQKAMR 522
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
+L GP + ++ + + E+ + E +S ++D PE
Sbjct: 523 ILKNNTGPTTIWNFMKPGKEFWESEITIRELEA-----SEYFVSADDDNLTAWPETLRQA 577
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQ 412
E +M+ A +++L+ +ER ++ +G + + + + L TL
Sbjct: 578 REKEFLMS-------AFGALVQYLRMLKIERDLITIGNFTWYDPIKKATSLVLDGQTLIN 630
Query: 413 LEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESM 472
+E+ N+ +G GTL ++N +T +G R+ ++WV HPL D I+ARLDAV
Sbjct: 631 MEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDSKKINARLDAV------- 683
Query: 473 GSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF 532
D N+D P SS LT + PD++R I+RI +F
Sbjct: 684 ------------DSLNAD-----PSARDQFSSRLTKM---PDLERLISRIHAGNCKAQDF 723
Query: 533 IAVMQAILYAGKQLQQL-HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
+ V++ +Q+ +I G +E T +++ +L TA+ P + +
Sbjct: 724 VRVLEG-------FEQIDYIMGLLKESETGSG--ESIIGQL--TAAMPDLASLLGYWKTA 772
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSV 651
++ A + +L + +G + +++ ++ +LD+++ R+ LG + +
Sbjct: 773 FDRPKAKENGIL---VPESGVEEDFDNSQEIIEQLHRDLDAMLKKARQDLGSSAICYRDN 829
Query: 652 SGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ +E+P K +P +W ++++TK+ RY+ PE+ + + +L A E + + +
Sbjct: 830 GKEIYQLEVPIKVKNIPKDWNQMSATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAG 889
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGR 768
F F +Y + AAV+ ++ LDCL +LA S RPVFV+D V + R
Sbjct: 890 RFHARFDEHYDTWLAAVRIVSQLDCLISLAKASGAIGHPSCRPVFVEDERSV-LEFEKLR 948
Query: 769 HPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
HP L + + D F+PND L ++TG N GKS +R + IMAQ+G ++P
Sbjct: 949 HPCLLSSVED-FIPNDIQLGGNHASIDLLTGANAAGKSTVLRMTCVAVIMAQIGCYLPCQ 1007
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++D
Sbjct: 1008 SARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYD 1067
Query: 889 GVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
GVA+A A L ++ H + F THY +A + + K M
Sbjct: 1068 GVAVAQAVLHHIATHIGALGFFATHYHSLA----------AEFENHPEIAPKRMAIHVDD 1117
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ VT+LYK+ GV+E SFG A + +P I A A + E
Sbjct: 1118 VERRVTFLYKLENGVAEGSFGMHCASMCGIPSKVIECAENAAKQWE 1163
>gi|422345812|ref|ZP_16426726.1| DNA mismatch repair protein mutS [Clostridium perfringens
WAL-14572]
gi|373227477|gb|EHP49791.1| DNA mismatch repair protein mutS [Clostridium perfringens
WAL-14572]
Length = 909
Score = 296 bits (758), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 272/933 (29%), Positives = 434/933 (46%), Gaps = 152/933 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 2 KLTPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPM 61
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
IP N ++ RLV G+KV + +Q E A G K YT ++
Sbjct: 62 CGIPFHASNSYIGRLVAKGYKVAICEQVEDPKF-AKGIVKRDVIKVITPGTYTDSSF--V 118
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YG 260
E+ ++NY++ + + D R + +ISTGD + G
Sbjct: 119 EET---------KNNYIMTI--------------YADLERNRCSLAITDISTGDFLATEG 155
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E G + + +P E++L L ++ K + PA SR
Sbjct: 156 ELEKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR------ 198
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ + +E E+ L+N E+ N S M + AL I +
Sbjct: 199 ----KPIEYFEENFEEVLNNQ------FGEKSNSLSL------MVKKSSNALVKYILDTQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + SL M + LS+ + LE+ N S+ G+LL +++ T T G
Sbjct: 243 KISLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMG 298
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SR+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 299 SRMLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY- 344
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
DI+R + +I ++ A + IA+ +I GK K
Sbjct: 345 -------------DIERILGKISNKNANAKDLIALKTSI---GKIPNV---------KGI 379
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEV 616
+ S+LLK + LL KE GDL I +G E+
Sbjct: 380 IENCTSSLLKNYHHNLDD---LRDIYDLLEKSIKEDPSLTLKDGDL-----IKDGFNGEI 431
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPL-NWA 671
R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+ +P +
Sbjct: 432 DELRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYSSIPEGRYI 489
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYYAEFQAAVQ 728
+ + R+ +PE+ ++L A+E+L C +D FL E + + +
Sbjct: 490 RKQTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHIDRLKTTAK 546
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNL 787
+A LDC+ LA ++ +F++P +D E I +GRHPV++ ++ F+PNDT +
Sbjct: 547 IIAELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGEFIPNDTII 603
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ + IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + V+D I+TR+GASD
Sbjct: 604 NKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDD 663
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--K 905
+ G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y+ ++K +
Sbjct: 664 LAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLR 723
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
C LF THY ++ ++ + G V Y V+ + D ++ +L K++ G ++
Sbjct: 724 CKTLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLRKIIEGGAD 771
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
S+G +VA+LA +P I+RA I LE E S
Sbjct: 772 QSYGIEVAKLAGIPDEVINRAKEILETLEMESS 804
>gi|110799241|ref|YP_695804.1| DNA mismatch repair protein MutS [Clostridium perfringens ATCC
13124]
gi|123049875|sp|Q0TRD6.1|MUTS_CLOP1 RecName: Full=DNA mismatch repair protein MutS
gi|110673888|gb|ABG82875.1| DNA mismatch repair protein MutS [Clostridium perfringens ATCC
13124]
Length = 910
Score = 296 bits (758), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 272/933 (29%), Positives = 434/933 (46%), Gaps = 152/933 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 2 KLTPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPM 61
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
IP N ++ RLV G+KV + +Q E A G K YT ++
Sbjct: 62 CGIPFHASNSYIGRLVAKGYKVAICEQVEDPKF-AKGIVKRDVIKVITPGTYTDSSF--V 118
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YG 260
E+ ++NY++ + + D R + +ISTGD + G
Sbjct: 119 EET---------KNNYIMTI--------------YADLERNRCSLAITDISTGDFLATEG 155
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E G + + +P E++L L ++ K + PA SR
Sbjct: 156 ELEKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR------ 198
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ + +E E+ L+N E+ N S M + AL I +
Sbjct: 199 ----KPIEYFEENFEEVLNNQ------FGEKSNSLSL------MVKKSSNALVKYILDTQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + SL M + LS+ + LE+ N S+ G+LL +++ T T G
Sbjct: 243 KISLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMG 298
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SR+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 299 SRMLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY- 344
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
DI+R + +I ++ A + IA+ +I GK K
Sbjct: 345 -------------DIERILGKISNKNANAKDLIALKTSI---GKIPNV---------KGI 379
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEV 616
+ S+LLK + LL KE GDL I +G E+
Sbjct: 380 IENCTSSLLKNYHHNLDD---LRDIYDLLEKSIKEDPSLTLKDGDL-----IKDGFNGEI 431
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPL-NWA 671
R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+ +P +
Sbjct: 432 DELRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYSSIPEGRYI 489
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYYAEFQAAVQ 728
+ + R+ +PE+ ++L A+E+L C +D FL E + + +
Sbjct: 490 RKQTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHIDRLKTTAK 546
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNL 787
+A LDC+ LA ++ +F++P +D E I +GRHPV++ ++ F+PNDT +
Sbjct: 547 IIAELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGEFIPNDTII 603
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ + IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + V+D I+TR+GASD
Sbjct: 604 NKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDD 663
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--K 905
+ G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y+ ++K +
Sbjct: 664 LAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLR 723
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
C LF THY ++ ++ + G V Y V+ + D ++ +L K++ G ++
Sbjct: 724 CKTLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLRKIIEGGAD 771
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
S+G +VA+LA +P I+RA I LE E S
Sbjct: 772 QSYGIEVAKLAGIPDEVINRAKEILETLEMESS 804
>gi|302678711|ref|XP_003029038.1| hypothetical protein SCHCODRAFT_258263 [Schizophyllum commune H4-8]
gi|300102727|gb|EFI94135.1| hypothetical protein SCHCODRAFT_258263 [Schizophyllum commune H4-8]
Length = 1206
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 262/957 (27%), Positives = 424/957 (44%), Gaps = 109/957 (11%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K++TP E+Q E+K + D +L + G + + +DA + + + +P
Sbjct: 284 KEFTPFERQFWEIKQNHYDTVLFFQKGKFYELYEDDARIGHQEFDLKITSRVKMSMVGVP 343
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETA-----AIKAHGPGKAGP---------FGRGLSA 192
+ + + G+KVG V Q+ETA + A GKA R L+
Sbjct: 344 EMSFDFWAAKFLGKGYKVGRVDQSETALGAEMRLAADKKGKAKSSEDKAKDKIVQRELNK 403
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
+YT TL E + + G + V +++D+ G G+ ++
Sbjct: 404 VYTNGTLVDPEMLTDEQAG------HCVAIIEDNDR-----------GDQSTFGICVLDC 446
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL---GQPLSKQTEKMLLAYAGPASNVRV 309
+T F D + LE ++ L P E+L+ G T LL P+
Sbjct: 447 ATSQFNMSHFTDDVCHTKLETMMRQLRPKEILVKKSGPGALSVTSTRLLKNILPSQCTWT 506
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP--DL 367
+ F + E+ LY + +D MD + G + + I ++
Sbjct: 507 NLRDVEGFTYPDTIEELRKLYPD---------QDDAMD--DGGLPETVPQSIRDVAHSQQ 555
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
A++AL I +L+Q +++ + +F + + L TL LEVL NN G++
Sbjct: 556 AMEALGSMIWYLRQLNIDKDILSMKNFNVYDPMKRGEGLVLDGQTLAHLEVLMNN-EGTD 614
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+LL +++ +T +G RL R W+ PL + + I RLDAV +I
Sbjct: 615 EGSLLKLLSRCITPFGKRLFRIWLCMPLREISSIDDRLDAVEDI---------------- 658
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+ P F + V L PD++R + RI ++ +F+ V+ + +
Sbjct: 659 --------LNHPSFESQFADVAKGL---PDLERIVARIHAKSCKIKDFLKVLSSFKKLSR 707
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAAD-QGDLL 603
+ L + + SKT+ S LL+ +P V+ ++ + A++ + + L
Sbjct: 708 GMNAL---ADTAAEFESKTI-SGLLR------GAPDVVPNIKQIEEMFERPASEKEAEEL 757
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG--ITHLIELP 661
M + + EV KA++ + L+ + +G + S +G +L+E
Sbjct: 758 VPMEGKDAVYDEVIAEIKALEKS---LNRQLKKYEDVVGGDLSYWHSATGNKDIYLVETK 814
Query: 662 ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
A+ K +P +W K TK RY P + + +L A E EF
Sbjct: 815 ASQKNIPRDWTKHGGTKAKTRYVVPALQPEIRKLKEARENRKTAIATFKSRLYAEFDVDR 874
Query: 721 AEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
+ ++ A LDCL +LA S + RP FV+ E + RHP L ++
Sbjct: 875 PLWLKIIRVFAELDCLFSLAKSSAAIGEPSCRPEFVE-SESSFMDFQELRHPTLSLQKVE 933
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
F+PND L E ++TGPNM GKS +R A IMAQ+G VPA+SA L +D I
Sbjct: 934 EFIPNDIRLGGEVGKIALLTGPNMAGKSTCMRMTATGVIMAQLGMRVPATSARLTPVDSI 993
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
TRMGA D++ STF EL+E ILR+ T +SLVI+DELGRGTST+DG+AIA A L
Sbjct: 994 LTRMGAYDNMFSNASTFKVELDECCKILRDATPRSLVILDELGRGTSTYDGMAIAGAVLH 1053
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
L H + F THY + D F YH S H M + +++ +L+K
Sbjct: 1054 ELATHTLPLTFFATHYGTLTD---DF-----AYHPSIRNMH--MSTLVDDEKKEIVFLFK 1103
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLS 1015
+V GV+ SSFG VA LA +P ++RA V++ + R+Q++ +K D+ +LS
Sbjct: 1104 LVEGVATSSFGTHVANLAGVPIEVVNRADVVSKAFAQQFQQRLQDKKSK-DVAARLS 1159
>gi|342876461|gb|EGU78072.1| hypothetical protein FOXB_11416 [Fusarium oxysporum Fo5176]
Length = 1228
Score = 296 bits (757), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 264/956 (27%), Positives = 439/956 (45%), Gaps = 107/956 (11%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P+ T+ IP + Q K++P E Q ++K D ++ + G + +
Sbjct: 323 RKPDHPEYDKRTIY-IPPAAWQ-----KFSPFETQYWKIKQNLWDTIVFFKKGKFYELYE 376
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
DA + + N +P L+ V + + +KV V Q ET
Sbjct: 377 NDATVGHQEFDFKMTDRVNMRMVGVPESSLDHWVNQFIAKQYKVARVDQMETN------- 429
Query: 181 GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDDD--GNVGKIRNGV 236
G+ + K+ + A+ V E C + LV ++ DD I+ V
Sbjct: 430 -----LGKEMRERQDKS--KKADKVITRELACILTAGTLVDGSMLQDDMASYCVAIKESV 482
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
D G+ + +TG F D + E ++ P ELLL + LS + +
Sbjct: 483 VDDL--PAFGIAFADTATGRFYLSTFVDDVDLTKFETLIAQTGPRELLLEKSRLSTKALR 540
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV-PEQGNH 354
+L P + + D F E + ED + +V PE
Sbjct: 541 ILKNNTSP-TTIWTHLKPGDEFW------EADKTRRELDCGGYFKAEDADEEVWPE---- 589
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQ 411
I + DLA+ A I +L+ LER + +F + + + L TL
Sbjct: 590 ---ILQSLRDDDLAMSATGALISYLRFLKLERPLLSQGNFELYNPIQKNGTLILDGQTLI 646
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
LEV N+ NG GTL ++N +T +G RL R WV HPLC+ + I+ RLDAV +
Sbjct: 647 NLEVFSNSVNGGSEGTLFSLLNKCVTPFGKRLFRSWVAHPLCNIDRINERLDAVEML--- 703
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
N+D T+ E QF + L + PD++R I+RI P +
Sbjct: 704 ----------------NADQTVRE-QF-------ASQLVKMPDLERLISRIHAGACKPED 739
Query: 532 FIAVMQAILYAGKQLQ-QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLS 590
F+ V++ +Q++ + + G Y+ + L+ RLI +S P + + S
Sbjct: 740 FVKVLEGF----EQIEYTMSLLGAYKG-------GNGLVDRLI--SSMPNLDEPLSYWRS 786
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
++ A LL I G + ++ ++ K++L+ L+ +K+ + L+F
Sbjct: 787 AFDRSKARDEKLL---IPERGIEEDFDQSSDRIEEIKQQLEDLLAEKKKEFKCKLLKFTD 843
Query: 651 VSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
V + +E P + KVP + ++++TK R++ PE+ + +L A E + + R
Sbjct: 844 VGKEIYQLEAPKSVKVPSTFRQMSATKDVKRWYFPELSQLVRELQEAEETHSQLVREVAS 903
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIHICSGR 768
F ++F Y + A++ ++ LDCL +LA + S + RP FVD+ E + R
Sbjct: 904 RFFQKFDVDYETWLQAIKIISQLDCLVSLAKASASLGQPSCRPEFVDE-ERSTVDFQELR 962
Query: 769 HP-VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPA 827
HP +++T+ D+F+PND L ++ ++TG N GKS +R + IMAQ+G +VPA
Sbjct: 963 HPCMMNTV--DDFIPNDIKLGGDQAKINLLTGANAAGKSTVLRMSCVAVIMAQIGCYVPA 1020
Query: 828 SSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTH 887
+ A L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++
Sbjct: 1021 TFARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSY 1080
Query: 888 DGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
DGVA+A A L ++ H C+ F THY +A T+F + + ++ +D
Sbjct: 1081 DGVAVAQAVLHHVATHIGCVGYFATHYHSLA---TEFENH------PEIRARRMQIHVDD 1131
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+ ++ VT+LYK+ GV+E SFG A + + I RA V A E E +SR+++
Sbjct: 1132 E-ERRVTFLYKLEDGVAEGSFGMHCAAMCGISSRVIDRAEVAAK--EWEHTSRLKD 1184
>gi|168218088|ref|ZP_02643713.1| DNA mismatch repair protein MutS [Clostridium perfringens NCTC
8239]
gi|182379897|gb|EDT77376.1| DNA mismatch repair protein MutS [Clostridium perfringens NCTC
8239]
Length = 910
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 271/931 (29%), Positives = 435/931 (46%), Gaps = 152/931 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 4 TPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP N ++ RLV G+KV + +Q E A G K YT ++ E+
Sbjct: 64 IPFHASNSYIGRLVAKGYKVAICEQVEDPKF-AKGIVKRDVIKVITPGTYTDSSF--VEE 120
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YGEF 262
++NY++ + + D R + +ISTGD + GE
Sbjct: 121 T---------KNNYIMTI--------------YADLERNRCSLAITDISTGDFLATEGEL 157
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
G + + +P E++L L ++ K + PA SR
Sbjct: 158 EKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR-------- 198
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
+ + +E ++ L N E+ N S M + AL I ++
Sbjct: 199 --KPIEYFEENSKEVL------NTQFGEKSNSLSL------MVKKSSNALVKYILDTQKI 244
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
L I + SL M + LS+ + LE+ N S+ G+LL +++ T T GSR
Sbjct: 245 SLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMGSR 300
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 301 MLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY--- 344
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
DI+R + +I ++ A + IA+ +I GK I E TS
Sbjct: 345 -----------DIERILGKISNKNANAKDLIALKTSI---GKIPNVKGI----IENCTSS 386
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVAR 618
L+ ++ + +LL KE GDL I +G SE+
Sbjct: 387 LLNDYY--------NNLDDLRDIYELLEKSIKEDPSLTLKDGDL-----IKDGFNSEIDE 433
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPL-NWAKV 673
R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+ +P + +
Sbjct: 434 LRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYSSIPEGRYIRK 491
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYYAEFQAAVQAL 730
+ R+ +PE+ ++L A+E+L C +D FL E + + + +
Sbjct: 492 QTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHIDRLKTTAKII 548
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHA 789
A LDC+ LA ++ +F++P +D E I +GRHPV++ ++ F+PNDT ++
Sbjct: 549 AELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGEFIPNDTIINK 605
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + V+D I+TR+GASD +
Sbjct: 606 DDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLA 665
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCM 907
G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y+ ++K +C
Sbjct: 666 GGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCK 725
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ ++ + G V Y V+ + D ++ +L K++ G ++ S
Sbjct: 726 TLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLRKIIEGGADQS 773
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
+G +VA+LA +P I+RA I LE E S
Sbjct: 774 YGIEVAKLAGIPDEVINRAKEILETLEMESS 804
>gi|436835161|ref|YP_007320377.1| DNA mismatch repair protein MutS [Fibrella aestuarina BUZ 2]
gi|384066574|emb|CCG99784.1| DNA mismatch repair protein MutS [Fibrella aestuarina BUZ 2]
Length = 892
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 276/952 (28%), Positives = 444/952 (46%), Gaps = 140/952 (14%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S++ K TPL +Q +K KYP LL+ VG + FGEDA A+K+LGI +N
Sbjct: 6 SAKPVKPAKETPLNKQYNIIKAKYPGALLLFRVGDFYETFGEDAVKASKILGITLTKRNN 65
Query: 140 FMT----ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
+ A P L+ H+ +LV AG +V + Q E A+ G RG++ L T
Sbjct: 66 GGSNEELAGFPHHSLDTHLPKLVRAGERVAICDQLEDPAMAK------GIVKRGVTELVT 119
Query: 196 KATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTG 255
+ ++V +NYL V + GK G D F GV ++ISTG
Sbjct: 120 PG-VSFNDNVLDTR-----RNNYLAAV-----HFGKGSAGQADDAF----GVAFLDISTG 164
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRD 315
E L Q + +K+L ++ PA V R+
Sbjct: 165 --------------------------EFLASQGNAAYIDKLLQSF-NPAE---VLYCKRN 194
Query: 316 CFIGGGALAEVMSLYENMGEDTLSN---NEDQNMDVPEQGNHRSAIEG--IMNMPDLAVQ 370
G + Y TL + D + +Q ++++G I +PD +
Sbjct: 195 RSEFGALFGDKFHTY------TLEDWAFTYDFAYNYLKQHFQTTSLKGFGIEGLPD-GIV 247
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
A + + +L + + + + R L + L T++ LE++ + G L+
Sbjct: 248 AAGVILHYLNETEHKDLQHIQRVTR-LEEDRYVWLDRFTIRNLELVSSQQEGGV--PLIQ 304
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
I++ T+T G+RLLR+W+ PL DR LI RL+ VS + HD+ +
Sbjct: 305 ILDQTVTPMGARLLRKWLMLPLKDRALIDERLNLVSLL---------------HDDPD-- 347
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
+L ++LT L + D++R ++++ R +P E + + +++ + ++++
Sbjct: 348 ----------LLEAMLTHLKQIGDLERLVSKVAVRRISPREMVQLKRSLQHV-LPIKEML 396
Query: 551 I-------DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
I D RE V+ K L L A + A +LST QG++
Sbjct: 397 ITALNQPADAPSREAVSLKKYADQLNPLSFLLDRIEAELRDDAPVLST-------QGNM- 448
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
I G ++ K S KE L L + ++ G+ +L+ + +E+
Sbjct: 449 ----IQTGVNPDLDELHKLAYSGKEYLAKLQDREIERTGISSLKISYNKVFGYYLEVTNA 504
Query: 664 FK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
K VP +W + + RY +PE+ D++ A E++ + + + Y A
Sbjct: 505 HKNRVPDDWIRKQTLVNAERYITPELKEYEDKILTAEEQIFSIESRMFGELVTATSEYVA 564
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DN 779
Q + ++ LD L + A ++ +VRP+ D + I GRH V++ L +
Sbjct: 565 TIQQNARVISVLDVLSSFAKVAVKNRYVRPLLNDGK---ALSIKDGRHAVIEQQLPPGEP 621
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
+VPND L E + +ITGPNM GKS +RQVALI +MAQ GSFVPA+SAEL ++D I+
Sbjct: 622 YVPNDVYLDDETQQIIVITGPNMAGKSALLRQVALIVLMAQAGSFVPAASAELGIVDKIF 681
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR+GASD++ +G STF+ E+ E + IL N + +SLV++DE+GRGTST+DGV+IA+A +Y
Sbjct: 682 TRVGASDNLSRGESTFMVEMTETASILNNLSERSLVLMDEIGRGTSTYDGVSIAWAITEY 741
Query: 900 LLEHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLY 957
L C LF THY ++ ++ + ++V+ K +G V +L
Sbjct: 742 -LHSTDCRPKTLFATHYHELNELAADLP-RIRNFNVAV----KEVG-------NKVIFLR 788
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRD 1009
K+ G SE SFG VAQ+A +P S + RA VI +LEA R N+ A R+
Sbjct: 789 KLREGGSEHSFGIHVAQMAGMPGSVVKRAAVILKQLEAS-HQREDNKEAIRE 839
>gi|336421688|ref|ZP_08601844.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000159|gb|EGN30312.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
5_1_57FAA]
Length = 882
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 263/939 (28%), Positives = 444/939 (47%), Gaps = 153/939 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ QQ ++ K +YPD +L +G + F +DA A+K L G L+
Sbjct: 5 TPMMQQYMQTKKEYPDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ ++ RLV+ G+KV + +Q E A G R + + T T +
Sbjct: 65 VPYHAVDGYLNRLVSKGYKVAICEQMEDPATAK------GLVKRDVVRIVTPGTNLDTQS 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ NY++CVV D R G+ +++TGD E +D
Sbjct: 119 LDETKN------NYIMCVV------------YIAD----RYGLSVADVTTGDYFVTELDD 156
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
L + P+EL+ + + L + + S D + A+
Sbjct: 157 S---EKLFDEIYKFMPSELICNEAFYMSGMDLDLM----KEKLGITIYSLDAWYFDDAIC 209
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHL---K 380
+ +L E+ H S +EG+ ++ D + A +++L +
Sbjct: 210 Q-RTLKEHF--------------------HVSTMEGLGLSDYDCGIIAAGALLQYLIETQ 248
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I L A + M L ++T + LE+ + G+LL +++ T T G
Sbjct: 249 KRDLSHITRLSA----YATGKYMLLDSSTRRNLELCETLREKHKRGSLLWVLDKTKTAMG 304
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+R LR+++ PL D+N I RLDAV E+ ++ S E + ++ + P +
Sbjct: 305 ARCLRKFIEQPLIDKNSIERRLDAVDELKQNAIS---REEIREY---------LTPVY-- 350
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HIDGEYREKV 559
D++R + +I +++A P + IA + L L HI K
Sbjct: 351 -------------DLERLVCKITYQSANPRDLIAFKSS-------LSMLPHI------KY 384
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSE 615
+ + S LLK L + + L+ KE A +G II +G E
Sbjct: 385 ILEEMKSPLLKDLYERLDT---LEDLCHLVEKAIKEDPPLAMKEGG-----IIRDGYNEE 436
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKV 673
V R R A K+ L L R++ G++NL+ + +E+ +FK VP + +
Sbjct: 437 VDRLRSAKSDGKDWLAKLETDEREKTGIKNLKIRYNKVFGYYLEVTNSFKHMVPDYYTRK 496
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEEL-----TIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
+ RY PE+ D + A ++L + C A D KE Q +
Sbjct: 497 QTLANAERYIIPELKELEDTILGAEDKLYALEYQLYCEAR-DKIAKEV----LRIQTTAK 551
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNL 787
A+A LD ++A ++ +VRP +E I I GRHPV++ ++ D F+ NDT L
Sbjct: 552 AIAQLDAFASMALVAEQSRYVRPKI---NEKGVIDIKDGRHPVVEKMIPNDMFISNDTYL 608
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ ++ IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA+SA++ ++D I+TR+GASD
Sbjct: 609 NDKKNRISIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAASADIGLVDRIFTRVGASDD 668
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--K 905
+ G+STF+ E+ E + ILRN T++SL+I+DE+GRGTST DG++IA+A ++++ +
Sbjct: 669 LASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVIEHISSSRLLG 728
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ +++ K +V Y ++ + K D D+ +L K+V G ++
Sbjct: 729 AKTLFATHYHELTELEGKI-DNVNNYCIA----------VKEKGD-DIIFLRKIVKGGAD 776
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQN 1003
S+G +VA+LA +P S SRA I +L A++++R+++
Sbjct: 777 KSYGIQVARLAGVPESVTSRAREIVEELVHADITTRIKD 815
>gi|313114064|ref|ZP_07799616.1| DNA mismatch repair protein MutS [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623473|gb|EFQ06876.1| DNA mismatch repair protein MutS [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 871
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 266/919 (28%), Positives = 420/919 (45%), Gaps = 126/919 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ QQ +E+K ++ D +L +G + F +DA A+K L G ++
Sbjct: 5 SPMMQQYLEIKKQHKDEILFYRIGDFYEMFFDDALTASKELDLTLTGKQCGMEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P +V RL+ G+KV + +Q E P KA G R + + T T+
Sbjct: 65 VPFHSYEGYVARLIAKGYKVAICEQVE-------DPAKAKGLVKRDIIRVVTPGTVI--- 114
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
ES+ L DD N +F G + G+ ++STG E N
Sbjct: 115 -----------ESSML----QDDRN--NYIASIFLKG--KKAGLCFADVSTGTAHITELN 155
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + L P+E+L+ L E + AY VE + + G
Sbjct: 156 ADKIAPAVITELCRYHPSEVLMNPGLLDCRE--VTAYIKKNMTCSVELIEEERYAPGLVT 213
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN-MPDLAVQALALTIRHLKQF 382
A SL G D Q + G R A+ ++ + D ++
Sbjct: 214 A---SLENQFGRDWA-----QTTGIAADGLVRFAMAALLEYLHDTQIK------------ 253
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
G+ER+ + + + + M LS T LE+ + GTLL +++ T T G R
Sbjct: 254 GVERL----KTVITYNKAQFMRLSPVTRANLELTETLRGREKRGTLLWVLDKTSTSMGKR 309
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
+LR W+ PL LI+ RL+AV ES+ + D+T
Sbjct: 310 MLRSWIEQPLISSALINHRLNAV-------------ESLVKQTMARGDLT---------- 346
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
LG D++R +TR + +ATP E + Q +L L E
Sbjct: 347 ----EELGYIADMERLMTRAVYGSATPKEIYTLAQTC----DRLPGLRRQAE-------- 390
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKA 622
L L + I A++ + V+ EA L + +I+ G +EV R
Sbjct: 391 ACGCPELAELAVQIDPLEDI--KARIYAAVDPEAPST--LKDGGVIAKGYHAEVDELRSI 446
Query: 623 VQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTI 680
+ K L L R++ G+ L+ + IE+ ++K VP + + +
Sbjct: 447 RDNTKGVLAQLEARLRQETGIPKLKIGYNHVFGYFIEVSNSYKSMVPETYIRKQTLTSGE 506
Query: 681 RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA 740
RY + E+ ++ A+E L + + L+ Q A+A LD L ALA
Sbjct: 507 RYITQELKELESKILGAHERLITLEHRLFSELLESISAQLDRIQRTANAVAQLDVLTALA 566
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQIITG 799
++ N+ RP+ VDD + ++ I GRHPV++ +L + FVPNDT L+ + C IITG
Sbjct: 567 QVAAENNYCRPI-VDDSD--ELTITEGRHPVVEQMLKGSLFVPNDTTLNCGADRCLIITG 623
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS Y+RQ ALI +MAQ+GSFVPASS + V+D I+TR+GASD + G+STF+ E+
Sbjct: 624 PNMAGKSTYMRQNALIALMAQIGSFVPASSCHVGVVDAIFTRIGASDDLSAGQSTFMVEM 683
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK---CMVLFVTHYPK 916
E + IL+N TA+SLV++DE+GRGTST DG++IA A ++++ + K C LF THY +
Sbjct: 684 TEVAEILKNATAKSLVVLDEIGRGTSTFDGMSIARAVVEHIADPAKGLGCKTLFATHYHE 743
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ +++ G V Y+++ K +D+T+L ++V G ++ S+G +VA+LA
Sbjct: 744 LTELEGGVDG-VKNYNIAV-----------KKRGEDITFLRRIVRGPADDSYGIEVAKLA 791
Query: 977 QLPPSCISRATVIAAKLEA 995
LP S RA + LEA
Sbjct: 792 GLPGSVTRRAHEVLRALEA 810
>gi|110803440|ref|YP_698493.1| DNA mismatch repair protein MutS [Clostridium perfringens SM101]
gi|123047422|sp|Q0STR4.1|MUTS_CLOPS RecName: Full=DNA mismatch repair protein MutS
gi|110683941|gb|ABG87311.1| DNA mismatch repair protein MutS [Clostridium perfringens SM101]
Length = 910
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 280/966 (28%), Positives = 448/966 (46%), Gaps = 160/966 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 4 TPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP N ++ RLV G+KV + +Q E + A G K YT ++ E+
Sbjct: 64 IPFHASNSYIGRLVAKGYKVAICEQVEDPKV-AKGIVKRDVIKVITPGTYTDSSF--VEE 120
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YGEF 262
++NY++ + D RN R + +ISTGD + GE
Sbjct: 121 T---------KNNYIMTIYSDLE-----RN---------RCSLAITDISTGDFLATEGEL 157
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
G + + +P E++L L ++ K + PA SR
Sbjct: 158 EKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR-------- 198
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
+ + +E E+ L N E+ N S M + AL I ++
Sbjct: 199 --KPIEYFEEKFEEVL------NSQFGEKSNSLSL------MIKKSSNALVKYILDTQKI 244
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
L I + SL M + LS+ + LE+ N S+ G+LL +++ T T GSR
Sbjct: 245 SLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMGSR 300
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 301 MLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY--- 344
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
DI+R + +I ++ A + IA+ +I GK K +
Sbjct: 345 -----------DIERILGKISNKNANAKDLIALKTSI---GKIPNV---------KGIIE 381
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVAR 618
S+LLK + +LL KE GDL I +G E+
Sbjct: 382 NCTSSLLKNYHHNLDD---LRDIYELLEKSIKEDPSLTLKDGDL-----IKDGFNGEIDE 433
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPL-NWAKV 673
R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+ +P + +
Sbjct: 434 LRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYSSIPEGRYIRK 491
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYYAEFQAAVQAL 730
+ R+ +PE+ ++L A+E+L C +D FL E + + + +
Sbjct: 492 QTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHIDRLKTTAKII 548
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHA 789
A LDC+ LA ++ +F++P +D E I +GRHPV++ ++ F+PNDT ++
Sbjct: 549 AELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGEFIPNDTIINK 605
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + V+D I+TR+GASD +
Sbjct: 606 DDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLA 665
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCM 907
G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y+ ++K +C
Sbjct: 666 GGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCK 725
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ ++ + G V Y V+ + D ++ +L K++ G ++ S
Sbjct: 726 TLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLRKIIEGGADQS 773
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPV 1027
+G +VA+LA +P I+RA I LE E S+K +L + L + +E
Sbjct: 774 YGIEVAKLAGIPDEVINRAKEILETLEME--------SSKDNLDLALKEVNASKEEMKEA 825
Query: 1028 SPESFY 1033
S E+ Y
Sbjct: 826 SIEASY 831
>gi|260591976|ref|ZP_05857434.1| DNA mismatch repair protein MutS [Prevotella veroralis F0319]
gi|260536260|gb|EEX18877.1| DNA mismatch repair protein MutS [Prevotella veroralis F0319]
Length = 886
Score = 295 bits (756), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 261/936 (27%), Positives = 442/936 (47%), Gaps = 146/936 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------AHLDHN 139
+K TP+ +Q +K ++PD +L+ G + +GEDA +A+VLGI L +
Sbjct: 5 DKGLTPMMKQFFSMKAQHPDAMLLFRCGDFYETYGEDAVESARVLGITLTRRNNGGLSGS 64
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 65 IEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREAIKGKKGLSAMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + +++V + E+N+L + + GK GV ++I
Sbjct: 125 LVTPG-VALSDNVLNYK-----ENNFLAAI-----HFGK-----------SACGVSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E + S P E+L + + E+ Y G R+
Sbjct: 163 STGEFLTGEGTFDYV----EKLFGSFQPKEVLFDRSKRRDFER----YFG----TRLCTF 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D ++ A L ++ G L + V N A I+ DL
Sbjct: 211 EMDDWVFTDQTAR-QKLLKHFGTKNL-----KGFGVEHLSNGVIAAGAILQYLDLTQHT- 263
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
I H+ S + + + T++ LE++ + G +LL+++
Sbjct: 264 --QINHI------------TSLTRIEEDKYVRMDRFTVRSLELVAPMNEGG--SSLLNVI 307
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
++T+T G R+LRRWV PL D +I+ RLD V +R S D +N+
Sbjct: 308 DNTITPMGGRMLRRWVVFPLNDVAVINERLDIVDHF------FRAS------DFRNN--- 352
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI-LYAGKQLQQLHI 551
++ QF+ + D++R I+++ +P E + + A+ + + L
Sbjct: 353 -IDEQFHQM-----------GDLERIISKVAVGRVSPREVVQLKNALKAIEPVKAECLST 400
Query: 552 DGEYREKVTSKTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ + ++ + A L+ I + P ++ K GD +I
Sbjct: 401 NNKSLNRIGEQLNLCANLRDRIEKEINVDPPQLVAK---------------GD-----VI 440
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF-- 664
++G E+ R + K+ L + Q G+ +L+ F +V G + +E+ F
Sbjct: 441 ASGYDKELDDLRSIRDNGKQYLLEIQEKEIAQTGISSLKVGFNNVFG--YYLEVRNTFKN 498
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
KVP +W + + + RY +PE+ +++ A+E++ + +++ + + Q
Sbjct: 499 KVPEDWIRKQTLAQAERYITPELKEYEEKILGADEKILAREGQLFMELIQDMQPFIPQIQ 558
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVP 782
+A LDCL + ++ +++VRP VDD + + IH GRHPV++T L + +VP
Sbjct: 559 VNANLVAHLDCLLSFMKIALQQHYVRPT-VDDSDVLDIH--QGRHPVIETQLPIGEQYVP 615
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND L E + +ITGPNM GKS +RQ ALI ++AQ+G FVPA A + ++D I+TR+
Sbjct: 616 NDVKLDTEHQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAERARIGIVDKIFTRV 675
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD+I G STF+ E+ EA+ IL N T +SLV+ DELGRGTST+DG++IA+A ++YL E
Sbjct: 676 GASDNISLGESTFMVEMTEAANILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHE 735
Query: 903 HKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
H K LF THY ++ +++ F+ + Y+VS + D + +L K+
Sbjct: 736 HPKAQARTLFATHYHELNEMEKSFS-RIKNYNVSV-----------KEVDGKIIFLRKLT 783
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G SE SFG VA++A +P S + RA VI +LEA+
Sbjct: 784 RGGSEHSFGIHVAEIAGMPRSIVKRANVILKELEAD 819
>gi|254167004|ref|ZP_04873857.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623860|gb|EDY36422.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 823
Score = 295 bits (755), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 268/916 (29%), Positives = 425/916 (46%), Gaps = 167/916 (18%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---AHLDHNFMTASIPTFRL 150
+Q +K KY D +L VG + F +DA++ +K L I D A IP L
Sbjct: 2 RQYHRIKAKYKDTILFFRVGDFYETFEDDAKLVSKELNIVLTRRSKDEPVPMAGIPYHAL 61
Query: 151 NVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY-----TKATLEAAEDV 205
+ ++ RLV G+KV + +Q E P KA RGL T TL ED
Sbjct: 62 DAYLSRLVKKGYKVAICEQLE-------DPAKA----RGLVRRDVVRVVTPGTL--IEDT 108
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
ED +N+L + D+ G A++ISTG+ GE +
Sbjct: 109 LLTED-----NNFLFSIYKHK---------------DI-YGFAALDISTGEFFAGELD-- 145
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
GL A +L L P+E+L L+ +LA E
Sbjct: 146 --FYGLNAEILRLQPSEILSNSKLNLDFPIKILA------------------------EE 179
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLE 385
+ YE + ++ E + E G L A AL ++ E
Sbjct: 180 YYNDYEKILKEHFKVAELSGFGIGEYG--------------LMAAASAL------KYAKE 219
Query: 386 RIMCLGASFRSLSGSME---MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
M + SL G + + L + TL+ LE+ N +Y TL H MN T G+R
Sbjct: 220 NTMNDLKNITSLQGYFKDKYLILDSTTLKNLEIFHNVLGEDKY-TLYHTMNKCETPMGAR 278
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LL+RW+ PL D + I+ RLDAV E+A +
Sbjct: 279 LLKRWMQRPLKDIDEINDRLDAVEELANKQ---------------------------LLQ 311
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
S+ T L R DI+R TR+ A P + I++ +++ KQ +L I+ E
Sbjct: 312 DSIRTILSRIKDIERIKTRVSLGRAVPRDLISLKESL----KQADKLRINFE-------- 359
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL-LNLMIISNGQFSEVARARK 621
S +LK +AS I +L+ E A GD + +I G E+ ++
Sbjct: 360 ---SKILKN---SASKIYGIEGIIELI-----ENAINGDYPVGEGVIKEGYNEELDEIKR 408
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKT 679
+AK + + R+ G++NL+ + + IE+ +N KVP ++ + + K +
Sbjct: 409 IASNAKLLIGKMEERERRSTGIKNLKIGYNDVMGYYIEVSKSNLSKVPKHYRRKQTLKNS 468
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
R+ + E+ ++ A + + + + LK+ G + +++A +D + +L
Sbjct: 469 ERFITDELKDLEYKILSAKDRIYEIENKIYKDILKKLGEMIDVIERTAKSIAIIDVISSL 528
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITG 799
A ++ N+ RP VD E + I I +GRHPV++ L +FVPNDT++++ + I+TG
Sbjct: 529 ARVALEMNYTRPE-VD--ESMDIEIRNGRHPVVE--LYTDFVPNDTHINSAARFI-ILTG 582
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS Y+RQVALI I+AQ+GSFVPA A++ ++D IYTR+GASD I +GRSTF+ E+
Sbjct: 583 PNMAGKSTYMRQVALIVILAQMGSFVPADYAKIGIVDRIYTRVGASDDITRGRSTFMMEM 642
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD 919
E + IL T +SL+++DE+GRGTST+DG+AIA++ +++ + +F THY + D
Sbjct: 643 VELANILNTATERSLILLDEIGRGTSTYDGLAIAWSITEHIHNSIRARTIFATHYHHLID 702
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQL 978
++ +V YH++ K QD + ++ KV+PG S+G +VA+LA +
Sbjct: 703 LEN-VLDNVRNYHIA------------VKETQDGLIFVRKVMPGGMSKSYGIEVAKLAGV 749
Query: 979 PPSCISRATVIAAKLE 994
P + RA I +E
Sbjct: 750 PEKVVKRAKEILNLIE 765
>gi|227484985|ref|ZP_03915301.1| possible DNA mismatch repair protein MutS [Anaerococcus
lactolyticus ATCC 51172]
gi|227236982|gb|EEI86997.1| possible DNA mismatch repair protein MutS [Anaerococcus
lactolyticus ATCC 51172]
Length = 869
Score = 295 bits (755), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 255/932 (27%), Positives = 445/932 (47%), Gaps = 155/932 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------AHLDHNFMTA 143
TP+ + V++K + D LL+ VG + F +DA + AKVL + H+D M
Sbjct: 11 TPMLRHYVDVKNDFKDALLLYRVGDFYETFFDDAIITAKVLSLTLTGKECGHVDRAPM-C 69
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAA 202
+P ++ +V RLV G+KV + Q E P A G R ++ + T TL
Sbjct: 70 GVPHHVIDTYVNRLVKKGYKVALCDQIE-------DPKDAKGLVKRAITRVITPGTLTDM 122
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
E + E+ NYL+ + +++ +G L + +ISTG +V
Sbjct: 123 ESLENKEN------NYLLSIFENE----------YG------LAMAYCDISTGKLV---- 156
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
GLE LS + LG+ Q EK+ + SN E + +
Sbjct: 157 -------GLEIKTLSQN-----LGKKAIDQIEKINPSEMVLTSNFDNEDIKKYLNLNNQI 204
Query: 323 LAEVMSL---YEN--------MGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
++ YEN +G+D L+ +D+ R I + N+ D +
Sbjct: 205 FINYINFTTDYENRVKTVNNYLGKDNLNKIKDK----------RLIIVALANLLDYIYKY 254
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+ H+ + +I M + +NT + LE+ RN S ++ TL+ I
Sbjct: 255 YEEKLDHINNIEILKINEF------------MEIESNTRKNLELTRNLSTNNKENTLISI 302
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T+ GSR++ W+ PL DR+ I+ RLD V G Y S
Sbjct: 303 LDQADTVMGSRMIHDWLERPLIDRDKINRRLDLVD------GFYEDS------------- 343
Query: 492 TIVEPQFYYILSSVLTSLGRSP-DIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
ILS +++L S D++R + +I ++ A + I++ +I K++ +L
Sbjct: 344 ---------ILSRNVSNLLDSVYDLERLLAKISYKRANARDLISLKNSI----KEMPKL- 389
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM---I 607
+ V + + ++ L+K L L P V + +NK D+ + N+ I
Sbjct: 390 ------KHVLADSTNN-LIKNLGLNL--PDV----EDIYELINKSIVDEPPI-NITEGGI 435
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-K 665
I + ++ ++ +A+++L + R+ G++NL+ + + IE+ +N K
Sbjct: 436 IKSQYDKDLDNLKEMADTAEDKLIEYESKQRELTGIKNLKVIFNKNNGYSIEVTKSNIDK 495
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
+ ++ + + K RY + E+ + E++ ++ ++ ++ Q+
Sbjct: 496 IDQSYIRKQTLKNQERYTTEELENISSLILNGKEKINLLEYELFNKIVENILNSTLRLQS 555
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPND 784
+ +A +D L++ A ++ ++ +P + +E I I GRHPV++ L +N F+ ND
Sbjct: 556 LSKMIANIDSLNSFAKIAHKYSYCKPNITESNE---ISIIEGRHPVIEINLDENEFIAND 612
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
TN+ + QIITGPNM GKS Y+RQ+ALI IMAQ+GSFVPA SAE+ + D I+TR+GA
Sbjct: 613 TNIGQDDNLIQIITGPNMAGKSTYMRQMALIIIMAQIGSFVPAKSAEIGICDKIFTRIGA 672
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
SD+I +G STF+ E+NE S I++N T +S VI+DE+GRGTS+ DG++IA A ++YL +HK
Sbjct: 673 SDNISKGESTFMLEMNEVSNIIKNSTEKSFVILDEVGRGTSSDDGLSIAMALVEYLSKHK 732
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
K +F TH+ ++ ++++ +V + L + + ++ +L K+ G S
Sbjct: 733 KVKTVFATHFHELTVLESELK-NVRNLKIEIL-----------EENNNLIFLRKISRGKS 780
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ S+G +VA+L+ LP + A I KL E
Sbjct: 781 DRSYGIEVAKLSGLPDEILENAKNIMEKLANE 812
>gi|169342625|ref|ZP_02863669.1| DNA mismatch repair protein MutS [Clostridium perfringens C str.
JGS1495]
gi|169299267|gb|EDS81336.1| DNA mismatch repair protein MutS [Clostridium perfringens C str.
JGS1495]
Length = 909
Score = 295 bits (755), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 273/931 (29%), Positives = 434/931 (46%), Gaps = 152/931 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 4 TPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP N ++ RLV G+KV + +Q E A G K YT ++ E+
Sbjct: 64 IPFHASNSYIGRLVAKGYKVAICEQVEDPKF-AKGIVKRDVIKVITPGTYTDSSF--VEE 120
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YGEF 262
++NY++ + D RN R + +ISTGD + GE
Sbjct: 121 T---------KNNYIMTIYSDLE-----RN---------RCSLAITDISTGDFLATEGEL 157
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
G + + +P E++L L ++ K + PA SR
Sbjct: 158 EKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR-------- 198
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
+ + +E E+ L+N E+ N S M + AL I ++
Sbjct: 199 --KPIEYFEEKFEEVLNNQ------FGEKSNSLSL------MIKKSSNALVKYILDTQKI 244
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
L I + SL M + LS+ + LE+ N S+ G+LL +++ T T GSR
Sbjct: 245 SLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMGSR 300
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 301 MLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY--- 344
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
DI+R + +I ++ A + IA+ +I GK K +
Sbjct: 345 -----------DIERILGKISNKNANAKDLIALKTSI---GKIPNV---------KGIIE 381
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVAR 618
S+LLK + LL KE GDL I +G E+
Sbjct: 382 NCTSSLLKNYHHNLDD---LRDIYDLLEKSIKEDPSLTLKDGDL-----IKDGFNGEIDE 433
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK-VPL-NWAKV 673
R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+ +P + +
Sbjct: 434 LRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYSSIPEGRYIRK 491
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYYAEFQAAVQAL 730
+ R+ +PE+ ++L A+E+L C +D FL E + + + +
Sbjct: 492 QTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHIDRLKTTAKII 548
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHA 789
A LDC+ LA ++ +F++P +D E I +GRHPV++ ++ F+PNDT ++
Sbjct: 549 AELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGEFIPNDTIINK 605
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + V+D I+TR+GASD +
Sbjct: 606 DDNQLLIITGPNMSGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLA 665
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCM 907
G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y+ ++K +C
Sbjct: 666 GGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCK 725
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ ++ + G V Y V+ + D ++ +L K++ G ++ S
Sbjct: 726 TLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLRKIIEGGADQS 773
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
+G +VA+LA +P I+RA I LE E S
Sbjct: 774 YGIEVAKLAGIPDEVINRAKEILETLEMESS 804
>gi|379730242|ref|YP_005322438.1| DNA mismatch repair protein MutS [Saprospira grandis str. Lewin]
gi|378575853|gb|AFC24854.1| DNA mismatch repair protein MutS [Saprospira grandis str. Lewin]
Length = 884
Score = 295 bits (755), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 259/947 (27%), Positives = 433/947 (45%), Gaps = 180/947 (19%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASI 145
TPL Q + K KY D +L+ VG + FG DA +A+KVLGI +N A
Sbjct: 13 TPLMAQYNDFKQKYADAVLLFRVGDFYETFGSDAVLASKVLGITLTARNNGSSKIELAGF 72
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAED 204
P L+ ++ +LV AG++V V Q E P K RG+ L T
Sbjct: 73 PHHSLDTYLPKLVRAGYRVAVCDQLEK-------PSKQKKIVKRGVVELVTPG------- 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ +SN + + ++G+ +LG+ ++IST + + E N
Sbjct: 119 ITTNDNILDHKSNNFLAAL----HIGR----------KDQLGLALLDISTAEFLVVEGNT 164
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
+ ++ +L + PAE++ + K+
Sbjct: 165 ----ASIDKLLQNFQPAEIIYAKNQKKE-------------------------------- 188
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL--ALTIRHLKQF 382
L E GE + IE + MPD + + L + LK F
Sbjct: 189 ----LLERFGERY----------------YTYGIEDWVFMPDYSREKLLEQFEVSSLKGF 228
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSN----------------GSEYG 426
G+E++ + ++ ++ T + N +++ R ++ GS Y
Sbjct: 229 GIEQLEMAQIAAGAILHYVQTTENKNLKHIVQIARIPTDRYVWMDSFTIRNLELVGSAYS 288
Query: 427 T---LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
+ LL +M+ T++ GSRLLR+WV P D I +R + V
Sbjct: 289 SGVSLLDVMDKTISPMGSRLLRKWVLMPRKDLTSIESRHEVVQAF--------------- 333
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
I +P +++ L LG D++R + +I P E + ++IL G
Sbjct: 334 ---------IDQPNLALLIADQLQQLG---DLERLVAKIPLGKINPREVRQLQRSILALG 381
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+ L D + + + ++ +R+ L P + + L D+G
Sbjct: 382 PIKEALAQDKQPQLQ--------SIAERMQLC---PLLCQRVDNWLKEEPAVKTDKGGF- 429
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELP 661
I G E+ R + +++E L+ + K+ G+ L+ F +V G + +E+
Sbjct: 430 ----IGTGVSEELDELRDLIANSREHLERIRVKEAKETGIDKLKIGFNNVFG--YYLEVT 483
Query: 662 ANFK----VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+K +P +W + + + RY S E+ ++ A E++ + + + +
Sbjct: 484 NRYKDKDLIPDHWVRKQTLTNSERYISEELKQLEGKILSAEEKIIALEQKLFGELVLFLN 543
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y Q Q +A LDCLH+ L+ +N+ RP HE + I I +GRHPV++ L
Sbjct: 544 DYIRPVQTNAQLVAQLDCLHSYHVLALEQNYCRPQM---HEGLDIEIKAGRHPVIEQQLK 600
Query: 778 --DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
+ +VPND L ER+ +ITGPNM GKS +RQ ALI +MAQ+G+FVPA SA+L ++
Sbjct: 601 AGELYVPNDIFLDNERQQILMITGPNMSGKSALLRQTALISLMAQMGAFVPADSAKLGLI 660
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D I+TR+GASD+I G STF+ E+NE + IL N + +SL+++DE+GRGTST+DG++IA+A
Sbjct: 661 DRIFTRVGASDNISSGESTFMVEMNETASILNNISNRSLILLDEIGRGTSTYDGISIAWA 720
Query: 896 TLDYLLEH--KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDV 953
+YL H + LF THY ++ ++ +F + +HV+ K +G + V
Sbjct: 721 IAEYLHNHPTARPKTLFATHYHELNELAQQFD-RIKNFHVAT----KELG-------KKV 768
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+L K+ G SE SFG VA++A +PP I RA+ I A+LE + S++
Sbjct: 769 IFLRKLKAGGSEHSFGIHVAKMAGMPPQLILRASEILAQLEEQRSAQ 815
>gi|335045167|ref|ZP_08538190.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 108
str. F0425]
gi|333758953|gb|EGL36510.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 108
str. F0425]
Length = 907
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 258/917 (28%), Positives = 438/917 (47%), Gaps = 130/917 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K +P+ +Q ++ K +YPD LL +G + F +DA A+K L G L+
Sbjct: 5 KLSPMMRQYLDSKKEYPDALLFYRIGDFYEMFFDDALTASKELDLVLTGKDCGLEERAPM 64
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P + +V +LV+ G+KV + +Q E P KA G R + + T T
Sbjct: 65 CGVPYHAADSYVSKLVSKGYKVAIGEQVED-------PKKAKGLVKREIIKVITPGT--Q 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
E+ E G++N+L+ + +G+ + G+ V V+I+TG+
Sbjct: 116 TEETALEE----GKNNFLMSIY-----LGEKKRGI-----------VTVDITTGECYATA 155
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ + L+ + SP E+L+ L ++ E L + ++ + F
Sbjct: 156 VDSS--KECLDEIS-RFSPKEILMNPSLKEEEE--LFSQINSRFSISLTEKEERFF---- 206
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+L E L + ++ + + +Q + R A+ G ++ + L IR ++
Sbjct: 207 SLTEADKLITAHFQSSI-----MGLGLSDQADLRRALGGCLSYLYDTQKNLLTHIRKIEY 261
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
F + M + + S L+ E LR + GTLL ++++T T GS
Sbjct: 262 FQNKDYMIVD------------SYSQRNLELWETLREKK---KRGTLLWVLDYTKTAMGS 306
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R+LR ++ PL D+ I ARLDAV E G Y E + ++
Sbjct: 307 RMLRHFLERPLRDKKKIEARLDAVEEFN---GHYIDMEELREY----------------- 346
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L S+ DI+R ++RI TA + +A+ ++ Y + L
Sbjct: 347 LDSIY-------DIERLLSRISLSTANARDLLALKLSLQYLPDIKKALL----------- 388
Query: 562 KTLHSALLKRLILTASS-PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS-EVARA 619
S+LL ++ + K + + + +G L+ FS +V
Sbjct: 389 -PFQSSLLSKMREELDCLEDIYRKIEEEIVEEPPLSVKEGGLIK------ASFSKDVEDY 441
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTK 677
R A + KE L L R++ G++NL+ + E+ ++ +P + + +
Sbjct: 442 RNAGVNGKEWLQELEAREREKTGIKNLKIKYNRIFGYCFEVSKAYQGEIPDYFIRRQTLA 501
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
+ RY + E+ +++ A E+L + A + + +E Q + LA LD
Sbjct: 502 QGERYITTELEELQNRILGAEEKLKDLEYALFCTLREEIAAELPRIQKTARELAHLDAYL 561
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYCQI 796
+LA L+ +N+VRP E + I GRHPV++ +L + +F+PNDT+L +E I
Sbjct: 562 SLAKLAIKENYVRPRL---SEGGSLFIKEGRHPVVEKLLEEEHFIPNDTSLEENQEIA-I 617
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNM GKS Y+RQVALI +++ +GSFVPA AEL + D I+TR+GASD + QG+STF+
Sbjct: 618 ITGPNMAGKSTYMRQVALIVLLSAIGSFVPAKEAELPICDRIFTRVGASDDLAQGQSTFM 677
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
E++E + ILRN T QSL+I+DE+GRGTST DG++IA+A ++Y+ H + LF THY +
Sbjct: 678 VEMSEVANILRNATKQSLLILDEIGRGTSTFDGLSIAWAVVEYIARHIQAKTLFATHYHE 737
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ +++ K +V Y ++ SK D ++++L K++PG ++ S+G VA+LA
Sbjct: 738 LTELEGKLN-NVKNYCIAV-----------SKKDGEISFLRKIIPGGADESYGIDVAKLA 785
Query: 977 QLPPSCISRATVIAAKL 993
+P +SRA I+A L
Sbjct: 786 GVPEGVLSRAREISAFL 802
>gi|440794306|gb|ELR15471.1| MutS domain V domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1150
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 255/947 (26%), Positives = 437/947 (46%), Gaps = 113/947 (11%)
Query: 92 LEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLD--HNFMTASIPTFR 149
++Q E+K ++ D ++ G + + +DAE++ ++L I +TA +
Sbjct: 202 FQRQYWEIKKQHWDKIIFCRNGVFWELYEKDAEISHRLLDIKLADPGAMGMLTAGVFENA 261
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRG------LSALYTKATLEAAE 203
+ + +L+ G+KV V+Q + + + R ++ + + TL +
Sbjct: 262 FDPYAAKLIALGYKVVKVEQMQANTKSSEKKNRPKDQARTNFIQLQVTRILSPGTL--VD 319
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
D+ ++ + YL+ V K + GD GV V+ +TG+V G+F
Sbjct: 320 DIYIDDE----RAIYLLAV--------KEKWEPSGDSELPSYGVCFVDTATGEVNVGQFQ 367
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQP-----LSKQTEKMLLAYAGPASNVRVECASR---- 314
D R+ E +LL + P E+L + S QT +++ NV +R
Sbjct: 368 DDRDRTQFETLLLQIKPREILYEKEGPTALCSPQTLQLI------KRNVNQPTLTRRRPG 421
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQ--GNHRSAIEGIMNMPDLAVQAL 372
D F A+ ++ G D + + + V Q +HR A EG +L + A
Sbjct: 422 DQFWNASTTADFLA-----GADYFAGGDREWPPVLSQLLKDHREAREG----SELCLSAF 472
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSG----SMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
+ +LK+ L++ + ++ +G S + L + T++ LE+ N +G GTL
Sbjct: 473 GGVVSYLKELYLDKEVLAQGRIKTYAGTTFDSPNLVLDSKTIKNLEIFENTVDGKTEGTL 532
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
L +M+H T +G RL +RW+ PL + I R +AV + G D
Sbjct: 533 LKLMDHCSTPFGKRLFKRWLAMPLKRIHEIEERQNAVEDFN------------GSEDHST 580
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
+ + +V +L PD++R ++RI ++ F++ + A + +
Sbjct: 581 T-----------LKDAVALNLKGLPDLERIVSRIHAGSSPILTFLSALDAFDLLWNMVSE 629
Query: 549 LH-IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
L + G+ R SK L A L L + P + + ++ DQ +I
Sbjct: 630 LQPLIGQLR----SKRL--AFL--LTVGKGFPDIAPQLEYFSRAFDR---DQAKSEQRLI 678
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVP 667
+ G E AR+ V++ +++L + ++++G+ ++ + +V +LIE+P + P
Sbjct: 679 LRPGVDEEFDAAREKVETIEQQLQQHLEDLKEEVGISDMAYATVRNKEYLIEIP---RTP 735
Query: 668 LNWAKV----------NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
N A + N TK RY +P + L A +L + ++F
Sbjct: 736 KNEAAIKRHKSTFIPINDTKSVGRYWTPTISALFADLEKARTDLERCRLGLFARNQQKFS 795
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
+ E+ AV +A +DCLH+LA S + + RP FV+ E RHP +
Sbjct: 796 ENHREWSLAVACMAEVDCLHSLAITSSSLGEPVCRPTFVEAKEAF-FEAEEMRHPCISPK 854
Query: 776 LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
+ D F+PN + + ++TGPNMGGKS +R+ ++ I+AQVG FVPA+S L +
Sbjct: 855 IGDEFIPNTLRVGHPHQPLILLTGPNMGGKSTLLRETCVLAIIAQVGCFVPAASCRLSPV 914
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D I+TR+GA+D+I G+STF+ EL E + IL++ T SLVI+DELGRGT+T DG +IAYA
Sbjct: 915 DRIFTRIGANDNIMAGQSTFMIELQETASILQHATPASLVILDELGRGTATFDGYSIAYA 974
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
L++L C LF THY + D V H++ K M ++VT+
Sbjct: 975 VLEHLSRKVGCRTLFSTHYHMLTD------EVVRNPHIAL----KHMSCHIDDDRKEVTF 1024
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
LYKV GV S+G VA++A + ++ A IA K E E++ +Q
Sbjct: 1025 LYKVADGVCPKSYGMNVARMAGVNEEIVASAEKIAQKFEGELAIDLQ 1071
>gi|383761504|ref|YP_005440486.1| DNA mismatch repair protein MutS [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381772|dbj|BAL98588.1| DNA mismatch repair protein MutS [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 874
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 275/928 (29%), Positives = 432/928 (46%), Gaps = 144/928 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ + +K++YPD +L+ +G + F EDA + A+V + D A
Sbjct: 3 TPMRQQYLSIKSQYPDCILLFRLGDFYETFDEDARIVARVCDVVLTSRPVGADQRVPLAG 62
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ ++ +LVNAG++V + +Q PGK G R + + TK TL D
Sbjct: 63 VPYHSVDYYIAKLVNAGYRVAIAEQVSE-------PGK-GLVEREVRRVVTKGTL---VD 111
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN- 263
G ++ +NYL+ VV +G R G G+ +ISTG+ + +
Sbjct: 112 PGMLDE---RRNNYLIAVV-----MG--RRGATA-------GIAYCDISTGEFAATQISA 154
Query: 264 ----DGFLRSGLEAVLLSLSPAELL-LGQPLSKQTEKMLLAYAGP------ASNVRVECA 312
+ R G E + L P+EL+ + + L+A P A V +E A
Sbjct: 155 PSQEEVERRIGEE--ISRLQPSELIHIDWEPQHSSLHGLIALHHPLLTTLEAWRVSLETA 212
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
SL + G TL Q PE +A+ + D+ A
Sbjct: 213 E-------------ASLKRHFGVATLDGYGLQGK--PEAIRAAAAVLAYVG--DMQPGAC 255
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
A R L + L+ M L + R ++E+T E +R +G G+LL ++
Sbjct: 256 AQLTR-LSTYTLDAFMTLDEATRR---NLELT---------ETMR---SGEVEGSLLGVL 299
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
N TLT GSRLLRRW+ PL D I+ RLDAV + ++ Q
Sbjct: 300 NATLTPMGSRLLRRWINQPLLDVAAINRRLDAVQRFVDDTLLRLDLRALLQ--------- 350
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
+ G D++R R+ A P + + + +A+ A K ++L
Sbjct: 351 ---------------NFG---DLERWTNRVMQGIALPRDLVGIREALRLAPKVAERL--- 389
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
G ++ L IL A++ LST +I G
Sbjct: 390 GNWQRAHEDSGTTDFPLCADILALLESALVDDPPANLSTPG-------------LIRPGF 436
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNW 670
+E+ + + A+E + L + R++LG++NL+ + IE+ + +VP ++
Sbjct: 437 DAELDSLVERSRHAREWIAGLEQVERERLGIKNLKVGYNKVFGYYIEVTKSQLDRVPNSY 496
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLAL-ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + RY +PE L + L L A+E + + + +
Sbjct: 497 IRKQTIANGERYITPE-LKEYETLVLNADERRLEIEQRLFGEICAQVAAQGTRLLHLAHL 555
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
LA +D ALA ++ + +VRP D P I I +GRHPV++ L D FVPNDT L
Sbjct: 556 LAEIDVFAALAEVALTRRYVRPEV--DEGPC-IEIVAGRHPVVEMTLTDEPFVPNDTLLT 612
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E QIITGPNM GKS Y+RQ ALI +MAQ+GSFVPA A + V+D I+TR+GASD I
Sbjct: 613 PE-TAIQIITGPNMSGKSTYLRQTALITLMAQIGSFVPAERARIGVVDRIFTRLGASDEI 671
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KC 906
+G+STF+ E+ E + IL + T +SL+++DE+GRGTST+DG+AIA+A ++Y+ H +
Sbjct: 672 HRGQSTFMVEMVETANILHHATPRSLLLLDEIGRGTSTYDGLAIAWAVIEYIHNHPRLRA 731
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ D+ + V Y+V+ DS +DV +L +++PG ++
Sbjct: 732 KTLFATHYHELTDLAERLPHVV-NYNVAV---------DDSGDGEDVVFLRRIIPGKADR 781
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLE 994
S+G VA++A LP ++RA I A LE
Sbjct: 782 SYGVHVARMAGLPAQVVARAEEILADLE 809
>gi|355704543|gb|AES02262.1| mutS-like protein 6 [Mustela putorius furo]
Length = 1278
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 268/983 (27%), Positives = 440/983 (44%), Gaps = 133/983 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP ++ ++K++ D+++ +VG + + DA + LG+ + N+ + P
Sbjct: 326 TPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGL-VFMKGNWAHSGFPEIA 384
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIK-------AHGPGKAGPFGRGLSALYTKATLEAA 202
+ LV G+KV V+QTET + AH R + + TK T +
Sbjct: 385 FGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYS 444
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
G D S YL+ + + + + G GV V+ S G G+F
Sbjct: 445 VLEG---DPSENYSKYLLSLKEKEED---------SSGHTRVYGVCFVDTSLGKFFIGQF 492
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+D S ++ P ++L + LS +T KM+L G S+ E
Sbjct: 493 SDDRHCSRFRTLVAHYPPVQVLFEKGNLSTET-KMILK--GSLSSSLQEGLIPGSQFWDA 549
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD-----------LAVQ 370
A M L E ++ L NED + +P+ ++G+ + D LA+
Sbjct: 550 AKTLRMLLEEGYFKEKL--NEDSGVLLPQ------VLKGMTSESDSLGLTPGEKSELALS 601
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSL------------------SGSMEMTLSANTLQQ 412
AL + +LK+ +++ + A+F G+ M L A TL
Sbjct: 602 ALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAIRPGAVFAKGNQRMVLDAVTLSN 661
Query: 413 LEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESM 472
LE+ N +NGS GTLL ++ T +G RLL++W+ PLC I+ RLDA+ ++
Sbjct: 662 LEIFMNGTNGSTEGTLLEKIDSCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDL---- 717
Query: 473 GSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP--S 530
+ EP +S V+ L + PD++R +++I H +P S
Sbjct: 718 --------------------MAEPD---KISDVVDLLKKLPDLERLLSKI-HNVGSPLKS 753
Query: 531 EFIAVMQAILYAGKQLQQLHI-------DG--------EYREKVTSKTLHSALLKRLI-L 574
+ +AI+Y + I +G E E++ + S +LK++I L
Sbjct: 754 QNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEI-ADNFKSKILKQVITL 812
Query: 575 TASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVARARKAVQSAKEEL 630
+P G+ L +N+ ++ L+ G S+ +A ++ ++ L
Sbjct: 813 QTKTPQ--GRFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSL 870
Query: 631 DSLINMCRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYHSPEV 687
+ R ++G R + + + + +E+P NF +P + ++ K RY + +
Sbjct: 871 LEYLEKQRSRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTI 930
Query: 688 LTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN 747
L L A E I + F Y ++Q+AV+ +A LD L LA SR +
Sbjct: 931 EKKLANLINAEERRDISLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGD 990
Query: 748 --FVRPVFV--DDHEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAERE------YCQI 796
RPV + ++ P + + RHP + T D+F+PND + E E YC +
Sbjct: 991 GPMCRPVILLPEEGTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCEEEEENGKAYCVL 1050
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
+TGPNMGGKS +RQ L+ +MAQ G ++PA L +D ++TR+GASD I G STF
Sbjct: 1051 VTGPNMGGKSTLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFF 1110
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
EL+E + IL + TA SLV+VDELGRGT+T DG AIA A + L E+ KC LF THY
Sbjct: 1111 VELSETASILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHS 1170
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ + ++ +V H++ + ++ P S + +T+LYK + G S+GF A+LA
Sbjct: 1171 LVEDYSQNV-AVRLGHMACMVENECEDP----SQETITFLYKFIKGACPKSYGFNAARLA 1225
Query: 977 QLPPSCISRATVIAAKLEAEVSS 999
LP I + A + E S
Sbjct: 1226 NLPEEIIQKGHRKAREFEKMTQS 1248
>gi|444321562|ref|XP_004181437.1| hypothetical protein TBLA_0F03840 [Tetrapisispora blattae CBS 6284]
gi|387514481|emb|CCH61918.1| hypothetical protein TBLA_0F03840 [Tetrapisispora blattae CBS 6284]
Length = 1256
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 253/957 (26%), Positives = 425/957 (44%), Gaps = 110/957 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL PSS K+TP E+Q E+K+K D ++ + G F + +DA +
Sbjct: 313 PDYDPRTLY---IPSSAWG---KFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDAIL 366
Query: 126 AAKVLG--IYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA 183
A + I N A IP + + + G+KV V Q E+ K G
Sbjct: 367 ANNLFDWKIAGGGRANMQLAGIPEMSFDHWSSQFIQLGYKVAKVDQRESMLAKEMREGTK 426
Query: 184 GPFGRGLSALYTKATLEAAEDVGGGEDGCGGESN---YLVCVVDDDGNVGKIRNGVFGDG 240
G R L + T TL DG +S+ Y + V ++ GN + G
Sbjct: 427 GIVKRELEYVLTSGTLT---------DGDMLQSDLATYCLAVREEPGNYYGDDDTFKTPG 477
Query: 241 FDVR---LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKM 296
+ GV ++ +TG + EF D S LE ++ + P E+L+ + LS K+
Sbjct: 478 LSLSKKIFGVAFIDTATGLLEMLEFEDDSECSQLETLMSQIKPKEVLIEKNNLSNLANKI 537
Query: 297 LLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRS 356
+ A P + + F E++S + N+D + E + +
Sbjct: 538 VKFNASPNAIFNYLKPEEEFFGFDKTYDELVS----NDPPYFATNDDWPKVLKEYYDSKK 593
Query: 357 AIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLGA--SFRSLSGSMEMTLSANTLQQL 413
+ A + +L+ L++ ++ +G + + + L TLQ L
Sbjct: 594 KV---------GFSAFGGLLYYLRWLKLDKSLISMGNINEYNPIKSQNSLILDGVTLQNL 644
Query: 414 EVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMG 473
E+ N+ +GS+ GTL ++N +T G R+LR+WV HPL +++ I R D++ + M
Sbjct: 645 EIFANSFDGSDKGTLFKLLNQGVTPMGKRMLRKWVIHPLFNKSAIEQRQDSIELLLSDM- 703
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFI 533
+ + S L+ L PD++R + RI F
Sbjct: 704 -----------------------ELRELFESKLSVL---PDLERMLARIHSGNLKMKLFE 737
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN 593
V+Q + E E++ S L AL + L+ ++ + +
Sbjct: 738 KVIQG----------FEVIVELIEQLKSFELKGAL--KTFLSQVPESLFNDVKNWSNAFD 785
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+ A + D++ L + G E ++R+ + S + EL+ +++ +++ N+++
Sbjct: 786 RRKALEEDIIELHL---GVEPEFDQSRECILSIENELNDILSGYKRRFKTSNIKYKDSGK 842
Query: 654 ITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
+ IE+P + +P +W ++ STK + RY+S EV + +A A E I+ +
Sbjct: 843 ELYTIEVPISIVKSIPSDWVQMGSTKTSKRYYSEEVRSLARSMAEARENHKIIENGLKEK 902
Query: 712 FLKEFG-GYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQ------- 761
K F Y + + ++ +DCL AL S + F +P F+D+ +
Sbjct: 903 LCKRFDLSYQTSWMPTINMISNIDCLLALTRTSESIGFPACKPKFIDNIDEKTGGNLNGY 962
Query: 762 IHICSGRHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMA 819
+ S RHP L + +F+PND L + ++TG N GKS +R + IMA
Sbjct: 963 LKFKSLRHPCFNLGSSTYRDFIPNDVELGKDVPQLGLLTGANAAGKSTVLRMTCIAVIMA 1022
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q+G +VP AEL +D I TR+GA+D+I QG+STF EL+E IL T +SL++VDE
Sbjct: 1023 QLGCWVPCEEAELTSIDRIMTRLGANDNIMQGKSTFFVELSETKKILDTATNRSLLVVDE 1082
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSY--LT 937
LGRG S+ DG AIA + L ++ H + + F THY G++G S+ +
Sbjct: 1083 LGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHY-----------GNLGLSFKSHPQIR 1131
Query: 938 SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
K+ +D K+ ++VT+LYK++ G SE SFG VA + +P + RA A LE
Sbjct: 1132 ELKMQILVDDKT-RNVTFLYKLINGQSEGSFGMHVASMCGIPKEIVDRAQDAADNLE 1187
>gi|363897251|ref|ZP_09323790.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB7]
gi|361958748|gb|EHL12045.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB7]
Length = 902
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 258/917 (28%), Positives = 436/917 (47%), Gaps = 130/917 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K +P+ +Q ++ K +YPD LL +G + F +DA A++ L G L+
Sbjct: 5 KLSPMMRQYLDSKKEYPDALLFYRIGDFYEMFFDDALTASRELDLVLTGKDCGLEERAPM 64
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P + +V +LV+ G+KV + +Q E P KA G R + + T T
Sbjct: 65 CGVPYHAADSYVSKLVSKGYKVAIGEQVED-------PKKAKGLVKREIIKVITPGT--Q 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
E+ E G++N+L+ + +G+ + G+ V V+I+TG+
Sbjct: 116 TEETALEE----GKNNFLLSIY-----LGEKKRGI-----------VTVDITTGECYATA 155
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ + L+ + SP E+L+ L ++ E L + ++ + F
Sbjct: 156 VDSS--KECLDEIS-RFSPKEILINPSLKEEEE--LFSQINSRFSISLTEKEERFF---- 206
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+L E L + ++ + + +Q + R A+ G ++ + L IR +
Sbjct: 207 SLTEADKLITAHFQSSI-----MGLGLSDQADLRRALGGCLSYLYDTQKNLLSHIRKIDF 261
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
F + M + + S L+ E LR + GTLL ++++T T GS
Sbjct: 262 FQNKDYMIVD------------SYSQRNLELWETLREKK---KRGTLLWVLDYTKTAMGS 306
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R+LR ++ PL D+ I ARLDAV E G Y E + ++
Sbjct: 307 RMLRHFLERPLRDKKKIEARLDAVEEFT---GHYIDMEELREY----------------- 346
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L S+ DI+R + RI TA + +A+ ++ Y + L
Sbjct: 347 LDSIY-------DIERLLARISLSTANARDLLALKLSLQYLPDIKKALS----------- 388
Query: 562 KTLHSALLKRLILTASS-PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS-EVARA 619
S+LL ++ S + K + + + +G L+ FS +V
Sbjct: 389 -PFQSSLLSKMGEEMDSLEDIYRKIEEEIVEEPPLSVKEGGLIK------ASFSKDVEDY 441
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTK 677
R A + KE L L R + G++NL+ + E+ ++ +P + + +
Sbjct: 442 RNAGVNGKEWLQELEARERDKTGIKNLKIKYNRIFGYCFEVSKAYQGEIPDYFIRRQTLA 501
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
+ RY + E+ +++ A E+L + A + + +E Q + LA LD
Sbjct: 502 QGERYITTELEELQNRILGAEEKLKDLEYALFCTLREEIAEELPRIQKTARELAHLDAYL 561
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYCQI 796
+LA L+ +N+VRP E + I GRHPV++ +L + +F+PNDT+L +E I
Sbjct: 562 SLAKLAIKENYVRPRL---SEGGSLFIKEGRHPVVEKLLEEEHFIPNDTSLEENQEIA-I 617
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNM GKS Y+RQVALI +++ +GSFVPA AEL + D I+TR+GASD + QG+STF+
Sbjct: 618 ITGPNMAGKSTYMRQVALIVLLSAIGSFVPAKEAELPICDRIFTRVGASDDLAQGQSTFM 677
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
E++E + ILRN T QSL+I+DE+GRGTST DG++IA+A ++Y+ H + LF THY +
Sbjct: 678 VEMSEVANILRNATKQSLLILDEIGRGTSTFDGLSIAWAVVEYIARHIQAKTLFATHYHE 737
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ +++ K +V Y ++ SK D ++++L K++PG ++ S+G VA+LA
Sbjct: 738 LTELEGKLN-NVKNYCIAV-----------SKKDGEISFLRKIIPGGADESYGIDVAKLA 785
Query: 977 QLPPSCISRATVIAAKL 993
+P +SRA I+A L
Sbjct: 786 GVPEGVLSRAREISAFL 802
>gi|226324941|ref|ZP_03800459.1| hypothetical protein COPCOM_02733 [Coprococcus comes ATCC 27758]
gi|225206289|gb|EEG88643.1| DNA mismatch repair protein MutS [Coprococcus comes ATCC 27758]
Length = 883
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 273/1008 (27%), Positives = 475/1008 (47%), Gaps = 154/1008 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q ++ K +Y D +L +G + F +DA A+K L G L+
Sbjct: 6 TPMMKQYMQTKEEYKDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLEERAPMCG 65
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
IP ++ ++ RLV+ G+KV + +Q E P A G R + + T T
Sbjct: 66 IPYHAVDSYLNRLVSKGYKVAICEQVE-------DPKTAKGIVKREVIRVVTPGT---NL 115
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
D G ++ ++NY++C+V D R G+ +++TG+ + E +
Sbjct: 116 DTQGLDET---KNNYIMCIV------------YMAD----RYGLSVADVTTGEYLVTELD 156
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ L L P+E++ + L + + + S + + AL
Sbjct: 157 S---QTKLMDELYKFMPSEIVCNEAFYMSG----LDLDDLKNRLHMAIYSLEAWYFDDAL 209
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHLKQF 382
+TL ++ +++EGI ++ + + A +++L++
Sbjct: 210 CR----------ETL-----------QEHFKVASLEGIGLSDYECGMIASGALLKYLEET 248
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
+ + R +G+ M L + T + LE++ + G+LL +++ T T G+R
Sbjct: 249 QKNSLSHMSRLTRYATGNY-MVLDSATRRNLELVETLREKQKRGSLLWVLDKTKTAMGAR 307
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LR++V PL D+ I RLDAV+E+ D I + L
Sbjct: 308 TLRKYVEQPLIDKESIVKRLDAVAEL--------------------KDNAICREEIREYL 347
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
+ V D++R + +I +++A P + IA ++ L + K K
Sbjct: 348 NPVY-------DLERLVGKITYQSANPRDLIAFQSSL----SMLPSV--------KCILK 388
Query: 563 TLHSALLKRLILTASSPA-----VIGKAAKLLSTVNKE---AADQGDLLNLMIISNGQFS 614
+ S LLK I P ++G+A + +E A +G II +G
Sbjct: 389 DMESDLLKE-IYEELDPLEELCDLVGRA------IQEEPPLAMKEGG-----IIKDGYNE 436
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAK 672
EV R RKA K L L R++ G++NL + +E+ +FK VP + +
Sbjct: 437 EVDRLRKAKSEGKNWLADLETKEREKTGIKNLRIRYNKVFGYYLEVTNSFKDLVPDYYTR 496
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ RY PE+ D + A ++L + + Q +A+A
Sbjct: 497 KQTLANAERYIIPELKELEDTILGAEDKLCALEYELYCEVRNTIAAELTRIQRTAKAVAK 556
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAER 791
LD + +LA ++ N+VRP +E I I GRHPV++ ++ D F+ NDT L ++
Sbjct: 557 LDVIASLALVAERNNYVRPKI---NEKGVIDIRDGRHPVVEKMIPNDMFIANDTYLDDKK 613
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
+ IITGPNM GKS Y+RQ ALI +MAQ+GSFVPASSA + ++D I+TR+GASD + G
Sbjct: 614 QRISIITGPNMAGKSTYMRQAALIVLMAQLGSFVPASSANIGLVDRIFTRVGASDDLASG 673
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVL 909
+STF+ E+NE + ILRN T++SL+I+DE+GRGTST DG++IA+A ++Y+ K L
Sbjct: 674 QSTFMVEMNEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVVEYISNSKLLGAKTL 733
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ +++ K + +V Y ++ + K D D+ +L K+V G ++ S+G
Sbjct: 734 FATHYHELTELEGKIS-NVNNYCIA----------VKEKGD-DIVFLRKIVKGGADKSYG 781
Query: 970 FKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQNRSAKRDLLVKLSDQEQEAQENM-PV 1027
+VA+LA +P I+RA I +L A+++ +V+N + V+ S+ +++ Q+ + V
Sbjct: 782 IQVAKLAGVPDPVINRAKEIVEELVTADITGKVKN------IAVQGSETKKKTQKKLDEV 835
Query: 1028 SPESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARS 1075
F L +D+++ ++ L++ T D K +Q R+
Sbjct: 836 DLTQFSLFDTVKDDDVLNELKE--LDISHMTPMDAMNKLYQLQNKLRN 881
>gi|320581644|gb|EFW95863.1| hypothetical protein HPODL_2146 [Ogataea parapolymorpha DL-1]
Length = 1638
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 253/980 (25%), Positives = 447/980 (45%), Gaps = 122/980 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
++ P P TL IP + K+T E+Q E+K+K D ++ + G F +
Sbjct: 277 RSESDPDYDPRTLY-IPKSAWS-----KFTAFEKQYWEIKSKMWDSIVFFKKGKFFELYE 330
Query: 121 EDAEMAAKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH 178
+DA++ + L + N A IP + ++ ++ G+KV V Q E+ K
Sbjct: 331 KDADIGHQKFDLKLAGTGRANMRLAGIPEMSFDYWAKKFIDEGYKVAKVDQKESLLAKEI 390
Query: 179 GPGKAGP-----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
A R LS + T TL ++G + C+ ++ ++
Sbjct: 391 REKNANTKDDKVIKRELSCVLTCGTL--------TDEGMLSDEMSRYCL-----SLKEVT 437
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
N F GV V+ +TG + +F D + LE +L + P E+L+ + +S+
Sbjct: 438 NNDNSKTF----GVCFVDTATGKIQLTQFEDDVDCNKLETLLAQIQPMEVLIEKSRVSQL 493
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM--SLYENMGEDTLSNNEDQNMDVPE 350
+ML + P + + + + A ++ +E D LSN + ++ E
Sbjct: 494 VLRMLKFNSQPHATFNFLKPADEFWTSEIAFEQLTRGKYFEANDLDDLSNYPNILVEYYE 553
Query: 351 QGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG-----ASFRSLSGSMEMT 404
+ + A + +LK L+ ++ +G +++ M
Sbjct: 554 SNKN------------VGFSAFGALLWYLKSLKLDTALISMGNIEQYDPYKTSFSDTCMR 601
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L TLQ LE+ N+ + S+ GTL I+N ++ +G R + WVTHPL R I +RLD+
Sbjct: 602 LDGVTLQNLEIFSNSFDQSDKGTLFKILNRAVSPFGKRTFKSWVTHPLMSRKTIESRLDS 661
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
V ++ + + Y+L S LG+ PD++R + RI
Sbjct: 662 V------------------------EILMNDGDLKYLLES---KLGKLPDLERLLARIHS 694
Query: 525 RTATPSEF---IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAV 581
+F + + I+ K L+ + +G R L L + IL + P +
Sbjct: 695 GNLKVKDFARCVTGFECIVSLVKILKSTYPEGTQR-------LGGELGR--ILDSFPPEL 745
Query: 582 IGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQL 641
+ + ++E A + +L + +F E + + ++ ++EL+ +++ R++
Sbjct: 746 PECVSNWSNAFDRELAVKDGILVPELGVEPEFDE---SNQKIKELEKELERILSQYRREF 802
Query: 642 GMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANE 699
+ + + +LIE+P+ ++P +W ++ +T K RY S EV + +L A E
Sbjct: 803 KCQEMCYKDSGKEIYLIEVPSKAISRIPKDWQQMAATSKCKRYWSTEVKKLVRKLMEARE 862
Query: 700 ELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDH 757
I+ + F G Y + ++++A+A LDC+ +LA S + RP F+D
Sbjct: 863 LHKIIGESLQARMYGRFMGDYPIWSSSIKAVAQLDCILSLARASESLGMPACRPEFID-S 921
Query: 758 EPVQIHICSGRHPVL---DTILLDNFVPNDTNLHAE-REYCQIITGPNMGGKSCYIRQVA 813
QI RHP +F+PND +L + +++ ++TG N GKS +R
Sbjct: 922 ASAQIEFQDLRHPCFIPGGITGSKDFIPNDISLGVDQKDHIGLLTGANAAGKSTVLRMTC 981
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
+ IMAQ+G FVPA SA+L +D I TR+GA+D+I QG+STF EL+E IL +CT +S
Sbjct: 982 VATIMAQIGCFVPAKSAKLTPVDTIMTRLGANDNIMQGKSTFYVELSETKKILESCTPRS 1041
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHV 933
L+I+DELGRG S+ DG AIA A L ++ H + + F THY + +
Sbjct: 1042 LIILDELGRGGSSSDGFAIAEAVLHHIATHIQSIGFFATHYATLGN-------------- 1087
Query: 934 SYLTSHKV----MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVI 989
S++ +V MG + ++ +++T+LYK+ G S SFG VA + +P + + A
Sbjct: 1088 SFINHPRVKPLRMGILVDENSRNITFLYKLESGRSSGSFGMHVAAMCGVPKNIVDNAEQA 1147
Query: 990 AAKLEAEVSSRVQNRSAKRD 1009
A K E +S+++ R+ + D
Sbjct: 1148 AEKWEH--TSKLKKRNVEAD 1165
>gi|302344788|ref|YP_003813141.1| DNA mismatch repair protein MutS [Prevotella melaninogenica ATCC
25845]
gi|302149251|gb|ADK95513.1| DNA mismatch repair protein MutS [Prevotella melaninogenica ATCC
25845]
Length = 886
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 270/1013 (26%), Positives = 462/1013 (45%), Gaps = 152/1013 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------ 139
+K TP+ +Q +K ++P L++ G + +GEDA +A++LGI +N
Sbjct: 5 DKGLTPMMKQFFSMKAQHPGALMLFRCGDFYETYGEDAVESARILGITLTRRNNGGNGDS 64
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 65 IEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREAIKGKKGLSAMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + +++V + E+N+L V FG G GV ++I
Sbjct: 125 LVTPG-VAMSDNVLNYK-----ENNFLAAVH-------------FGKG---SCGVSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E +L + P E+L + + E+ Y G R+
Sbjct: 163 STGEFLTGEGTFDYV----EKLLGNFQPKEVLFDRAKKQDFER----YFG----TRLCTF 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D ++ A L ++ G L + V N A I+ ++
Sbjct: 211 EMDDWVFTDQTAR-QKLLKHFGTKNL-----KGFGVDHLNNGVVAAGAILQYLEITQHT- 263
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGTLLHI 431
I H+ S + + + T++ LE++ N +GS +LL++
Sbjct: 264 --QINHI------------TSLARIEEDKYVRMDRFTIRSLELIAPMNEDGS---SLLNV 306
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
+++T+T G R+LRRW+ PL D I+ RLD V D
Sbjct: 307 IDNTITPMGGRMLRRWMVFPLKDEKPINERLDVV------------------------DY 342
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
EP F ++ +G D++R I+++ +P E + + A++ +Q +
Sbjct: 343 LFREPDFRECINEQFHRIG---DLERIISKVAVGRVSPREVVQLKNALM----AIQPVKT 395
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
Y + T K + L ++ + K + + ++GD++ L G
Sbjct: 396 VCLYTKSDTLKRIGEQL-------NLCESLRDRIEKEIQPDPPQLVNKGDVIAL-----G 443
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLN 669
E+ R + K+ L + Q G+ +L+ + + +E+ F KVP N
Sbjct: 444 FNQELDDLRSIRDNGKQYLLEIQEKEIAQTGITSLKIGFNNVFGYYLEVRNTFKDKVPEN 503
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W + + + RY +PE+ +++ A+E++ + + +++ + + Q
Sbjct: 504 WIRKQTLAQAERYITPELKEYEEKILGADEKILALETQLYMELIQDMQEFIPQIQINANL 563
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNL 787
+A LDCL + +S+ + +VRPV VDD E + I GRHPV++T L + +VPND L
Sbjct: 564 IAHLDCLLSFMKVSQLQRYVRPV-VDDSEVIDIK--QGRHPVIETQLPIGEQYVPNDVLL 620
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
E + +ITGPNM GKS +RQ ALI ++AQ+G FVPA A + ++D I+TR+GASD+
Sbjct: 621 DTEHQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDN 680
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
I G STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA+A ++YL EH +
Sbjct: 681 ISLGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHSRAQ 740
Query: 908 --VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ +++ F + ++VS + D + ++ K+ G SE
Sbjct: 741 ARTLFATHYHELNEMEKNFP-RIKNFNVSV-----------KQVDGKIIFVRKLEKGGSE 788
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENM 1025
SFG VA++A +P S + RA VI +LE + S ++ + A E +
Sbjct: 789 HSFGIHVAEIAGMPRSIVKRANVILKELEKDNS--------------QVGSVGKAAVERL 834
Query: 1026 PVSPESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAK 1078
S E L + + +++ RD L L ++ P ++ L + I K
Sbjct: 835 DQSREGVQLSFFQLDDPVLTQIRDEILGLD--VNNLTPVEALNKLNDIKKIVK 885
>gi|256420944|ref|YP_003121597.1| DNA mismatch repair protein MutS [Chitinophaga pinensis DSM 2588]
gi|256035852|gb|ACU59396.1| DNA mismatch repair protein MutS [Chitinophaga pinensis DSM 2588]
Length = 868
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 258/919 (28%), Positives = 419/919 (45%), Gaps = 138/919 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT-----AS 144
TPL QQ +K +YPD +L+ VG + F +DA +A+KVLGI N A
Sbjct: 9 TPLMQQHNAIKARYPDAVLLFRVGDFYETFNDDAIIASKVLGIVLTKRANGSASQQDLAG 68
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG++V V Q E + G RG++ + T
Sbjct: 69 FPHHSLDTYLHKLVKAGYRVAVCDQLEDPKMAK------GIVKRGVTEMVTPG------- 115
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
V + SN + V FG GV ++ISTG+ + N
Sbjct: 116 VAVNDKILENASNNFLAAVH------------FGKELT---GVAFLDISTGEFFVAQGNL 160
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L S PAE++ +P K ++ S F
Sbjct: 161 EYV----DKLLQSFKPAEVIFARPQQKHFKEQF------GSKFYTYTLEEWIFT------ 204
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT--IRHLKQF 382
N E+TL + + H G+ + D + A A +R +
Sbjct: 205 ------TNYAEETL---------LKQFETHSLKGFGVDGLQDAIIAAGACLHYLRDTEHP 249
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNN-SNGSEYGTLLHIMNHTLTIYGS 441
L+ I + + + + + T++ LE+L ++ NG TLL ++ T+T G+
Sbjct: 250 HLQHI----TNIQRIEQDDFLWMDRFTIRNLELLGSSVENGH---TLLKTLDTTVTPMGA 302
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL+RW+ PL D I+ RLD V +H K +D++
Sbjct: 303 RLLKRWMVLPLRDIKQINERLD-----------------VTEHFIKETDLS--------- 336
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
VL L ++ D++R +++I R P E ++ K LQQ+ E +++ +
Sbjct: 337 -RDVLQHLKQTGDLERLVSKIPLRKINPRE-------VMMLAKALQQV----EGIKQLLA 384
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
KT H L P ++ + + + +G +I NG +E+ R
Sbjct: 385 KTGHPYLTAIGEKLNPCPGILCRILEQIVETPPILVSKGG-----VIQNGIHTELDNLRT 439
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKT 679
S KE L + G+ +L+ F +V G + KVP NW + +
Sbjct: 440 IAHSGKEYLLRIQQTESDATGIPSLKVAFNNVFGYYLEVTNAHKSKVPENWIRKQTLANA 499
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY +PE+ +++ A E++ + +D L + Q Q +A LDCL +
Sbjct: 500 ERYITPELKEYEEKIVGAEEKILALEIQLFDELLLALQPHIQAIQQNAQLMARLDCLLSF 559
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQII 797
A + + RP + + + I GRHPV++ L +++V ND L E + I+
Sbjct: 560 ANNAIQYKYRRPNVTEGY---HLDIREGRHPVIERGLPPGESYVANDIVLDKEEQQIIIL 616
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS +RQ ALI +MA +GSFVPAS+AE+ + D I+TR+GASD++ G STF+
Sbjct: 617 TGPNMSGKSALLRQTALITLMAHMGSFVPASAAEIGLTDKIFTRVGASDNLSGGESTFMV 676
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL--LEHKKCMVLFVTHYP 915
E+NE + I+ N T +SLVI+DE+GRGTST+DG++IA++ ++YL + K LF THY
Sbjct: 677 EMNETASIINNITPRSLVILDEIGRGTSTYDGISIAWSIVEYLHDMTPHKPKTLFATHYH 736
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ +++ K G + YH++ + +S V +L K+ PG S SFG VA++
Sbjct: 737 ELNELENKH-GRIKNYHIT-----------NKESGNKVIFLRKLAPGGSRHSFGIHVARM 784
Query: 976 AQLPPSCISRATVIAAKLE 994
A +PP + RA + + LE
Sbjct: 785 AGMPPQLLQRANEVLSHLE 803
>gi|187250631|ref|YP_001875113.1| DNA mismatch repair protein MutS [Elusimicrobium minutum Pei191]
gi|226723061|sp|B2KB17.1|MUTS_ELUMP RecName: Full=DNA mismatch repair protein MutS
gi|186970791|gb|ACC97776.1| DNA mismatch repair protein MutS [Elusimicrobium minutum Pei191]
Length = 851
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 254/941 (26%), Positives = 436/941 (46%), Gaps = 143/941 (15%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS 144
+K+ TPL +Q ++K+K D+++ +G + F DA A+++LGI
Sbjct: 3 ESKQLTPLMRQYNDIKSKNTDLIVFFRLGDFYEMFDSDAREASRILGIALTQRGGVPMCG 62
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +++ G KVG+ +Q T G GK+ F R + + T T+
Sbjct: 63 VPYHAAANYISKIIKEGRKVGICEQVGT------GEGKSKLFERKIVRVITPGTVI---- 112
Query: 205 VGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
ED SNYLVCV D + G G A+++STG+ E
Sbjct: 113 ----EDNMLQSNVSNYLVCVFTD-------KKG---------WGAAAIDVSTGEFWVTEQ 152
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
D +GL +L +L+PAE+LL + L + M++ G
Sbjct: 153 ADDISLNGLSCMLAALNPAEILLDKITLDRVKSSMMIP---------------------G 191
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++A + E ++ +P +S G A+ A+ ++ +
Sbjct: 192 SVATTIVPRE------------ESSQIPSNWPSQSVWAGKKTALTCALTAIKYI--NVNE 237
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
G + ++ ++ +S + L N ++ LE++ + NG+ G+L H+++ T+T G
Sbjct: 238 PGFKDLLI--PFYKEISDYL--ALDENAVRTLELV--SQNGARKGSLWHLLDFTVTPMGG 291
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R L+ W+ +PL + I R + VS ++ P Y
Sbjct: 292 RTLKNWILNPLLNLADIEKRQNCVSNFYDN------------------------PLAYEE 327
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L +L + DI+R ++R+ A P + + ++ L + G +
Sbjct: 328 LKVILADIS---DIERIMSRVGTGNAGPRDLAGLARS----------LAVHGALKNWFDK 374
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNK-----EAADQGDLLNLMIISNGQFSEV 616
LK IL S VI A LL++ + + +D G II G +E+
Sbjct: 375 YGAVVPYLKENIL--SKITVIEDLANLLNSAIEPNPPIKISDGG------IIKQGFNAEL 426
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L + + G+ L+ F SV G + + KVP ++ +
Sbjct: 427 DDLRNTKNNSSKTLAELCEREKAKTGISTLKVGFNSVFGYYIEVSKGQSGKVPFSYTRKQ 486
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ R+ + E+ D++ A E++ + + +DS K + ++ +A+A LD
Sbjct: 487 TLTNAERFITEELKEIEDKILHAEEKILRLETSLFDSVRKHLAEHIGVMRSFAKAIAELD 546
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREY 793
LA ++ F +PV E + RHPV++ L L +FVPND +L E +
Sbjct: 547 VYSNLAHCAKVYKFTKPVI---DESNILKAADLRHPVVEACLPLGSFVPNDIDLGGETQ- 602
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS Y++Q A++ I+AQ+GSFVPA+SA + ++D I TR+GA D+I G+S
Sbjct: 603 ISVITGPNMGGKSVYLKQAAVLVILAQMGSFVPAASAHVGIVDKIMTRIGAQDAIAMGQS 662
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE--HKKCMVLFV 911
TF+ E+ E S+IL +CT +SL+++DE+GRGTST DG++IA+A ++L + VLF
Sbjct: 663 TFMVEMKETSHILASCTPKSLILLDEVGRGTSTFDGISIAWAITEFLYKPHGGGAKVLFA 722
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ D++ K+ G + +H +V D+ + +LYK+ G + S+G
Sbjct: 723 THYFELTDLENKYKG-IKNFHA------EVQEYKDADGQSKIAFLYKIKEGAGDKSYGIH 775
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLV 1012
V +LA LP + I RA + LEA+ + V S K D +V
Sbjct: 776 VGELAGLPATVIVRAKKVIKDLEAKKGTSV---SKKEDDIV 813
>gi|73669015|ref|YP_305030.1| DNA mismatch repair protein MutS [Methanosarcina barkeri str.
Fusaro]
gi|90109848|sp|Q46CE2.1|MUTS_METBF RecName: Full=DNA mismatch repair protein MutS
gi|72396177|gb|AAZ70450.1| DNA mismatch repair protein MutS [Methanosarcina barkeri str.
Fusaro]
Length = 900
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 264/931 (28%), Positives = 432/931 (46%), Gaps = 130/931 (13%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA------HLDHNF 140
K TP Q E K YPD L+ +G + FGEDA+ AK L I
Sbjct: 3 KMMTPAMCQYYEAKQAYPDTLIFFRMGDFYESFGEDAKTIAKELEITLTARGKDKSGERM 62
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATL 199
A IP ++ ++ RL+N G+KV + +Q E P KA G RG+ + T T
Sbjct: 63 PLAGIPYHAIDTYLPRLINKGYKVAICEQLE-------DPKKAKGIVKRGVVRVVTPGT- 114
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDD-GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
A D D +NYL+ V + G GK F +GV ++ISTG+ +
Sbjct: 115 --AIDSSMFSDAS---NNYLMAVAGREIGKPGKNAENEF------EIGVSFLDISTGEFL 163
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA--SNVRVECASRDC 316
+F D L + L + P+E +L L Y PA +R + ++
Sbjct: 164 TTQFRDSENFEKLLSELARMRPSECILPSSL----------YENPALAERLRAQTIVQE- 212
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH--RSAIEGI--MNMPDLAVQAL 372
A +S + GE NH + +EG+ N+ D AV +
Sbjct: 213 ------FAPDISGAKEAGE--------------RLKNHFRVATLEGMGCENL-DFAVYSA 251
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+ + + + + + + R+ S S M L + TL+ LE+++N + + +L I+
Sbjct: 252 WAALEYAQTTQMRELTHIN-TLRTYSNSEFMILDSVTLRNLEIVKNVRDEGDENSLYRIL 310
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
NHT T GSR L++W+ PL I+ RLDAV E+
Sbjct: 311 NHTKTPMGSRALKKWLLKPLLSVEKINYRLDAVEELT----------------------- 347
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH-I 551
+P Y L + L+ + DI+R + R+ + + + +A+ K L+ L +
Sbjct: 348 -AKPLLRYDLRNWLSDV---RDIERLVGRVVYGNSNARDLVAL-------KKSLEALPPV 396
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG--DLLNLMIIS 609
E + S L+ A A + L +++ D+ + +I
Sbjct: 397 RDSLLENIESTILND--------IAVGLASFSELENLAEMIDRAIVDEPPISVREGGMIK 448
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVP 667
+G +E+ + ++++ + + R++ G+++L+ + IE+ AN +VP
Sbjct: 449 SGYNAELDELKDIASNSRQWIANFQQKERERSGIKSLKVGYNKIFGYYIEVTNANSSQVP 508
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
++ + + R+ +PE+ + ANE+ + + L+ + E Q
Sbjct: 509 EDYIRKQTMANAERFFTPELKEKESLILTANEKAIALEYEIFTEILQTLSAHSRELQETA 568
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNL 787
+ + LD L LA ++ N N++RP DD +I I GRHPV++ + FVPNDT +
Sbjct: 569 ERIGTLDVLTDLAEVAENNNYIRPQLTDD---CKILIRDGRHPVVENTVHGGFVPNDTEM 625
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ ++TGPNM GKS Y+RQ ALI IMAQVGSFVPAS A + ++D ++TR+GA D
Sbjct: 626 DCKENQFLLVTGPNMAGKSTYMRQTALIAIMAQVGSFVPASYASIGIIDQVFTRIGAFDD 685
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ G+STF+ E+ E + IL N + +SLV++DE+GRGTST+DG +IA A +++L K
Sbjct: 686 LASGQSTFMVEMVELANILNNASPRSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVG 745
Query: 908 V--LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
V LF THY ++ ++ K V YHV+ + ++ +L K+VPG ++
Sbjct: 746 VRALFATHYHQLTALEEKLK-RVKNYHVAV-----------KEEGHELVFLRKIVPGATD 793
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
S+G +VA+LA +P I RA I +LE E
Sbjct: 794 RSYGIQVARLAGVPEKVIERANEILKELERE 824
>gi|257439842|ref|ZP_05615597.1| DNA mismatch repair protein MutS [Faecalibacterium prausnitzii
A2-165]
gi|257197751|gb|EEU96035.1| DNA mismatch repair protein MutS [Faecalibacterium prausnitzii
A2-165]
Length = 871
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 264/919 (28%), Positives = 429/919 (46%), Gaps = 126/919 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ QQ +++K +Y D +L +G + F +DA A++ L G ++
Sbjct: 5 SPMMQQYMDIKKQYKDEILFYRIGDFYEMFFDDALTASRELDLTLTGKQCGMEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P +V RL+ G+KV + +Q E P KA G R + + T T+
Sbjct: 65 VPFHSYEGYVARLIAKGYKVAICEQME-------DPSKAKGLVKRDIIRVVTPGTV---- 113
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
ES+ L DD N +F G G+ ++STG E
Sbjct: 114 ----------IESSML----QDDKN--NYIASIFLKGNAA--GICFADVSTGTAHITELK 155
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ + A L P+E+L+ + E L Y VE + + G
Sbjct: 156 REKIVPAVIAELCRYHPSEVLMNPGMLDCRE--LTGYIKKNMTCSVELVEEERYAPGLV- 212
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF- 382
+SL E+ N D+ + ++G R A+ A L H Q
Sbjct: 213 --AISL-----ENQFGRNWDETTSIDKKGLVRFAM------------AALLEYLHTTQIK 253
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
G+ER+ + S + + M LS T LE+ + GTLL +++ T T G R
Sbjct: 254 GVERL----KTVISYNEAQYMQLSPVTRANLELTETLRGREKRGTLLWVLDKTSTAMGKR 309
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LLR W+ PL + I+ RLDAV + +++V + D ++E + +YI
Sbjct: 310 LLRTWIEQPLLSSDAINHRLDAVESLV--------NQTVQRGD-------LIE-ELHYI- 352
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
D++R +TR + +ATP E A+ Q QQ ++
Sbjct: 353 ----------ADLERMMTRTVYGSATPKEIYAMAQTCERLPSLRQQ------------AE 390
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKA 622
+ A L ++ + I K+ + V+ +A L + +I+ G EV R
Sbjct: 391 SCGCAELSEIVSRIDPLSDIKD--KIYAAVDPDAPST--LKDGGVIAKGYHPEVDELRSI 446
Query: 623 VQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTI 680
+ K L L R++ G+ L+ + IE+ ++K VP ++ + +
Sbjct: 447 RDNTKGVLAQLETRLRQETGIPKLKIGYNHVFGYFIEVSNSYKAQVPESYIRKQTLTTGE 506
Query: 681 RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA 740
RY + E+ +++ A+E L + ++ L+ G Q A+A LD L ALA
Sbjct: 507 RYITQELKELENKILGAHERLIALEHRLFNELLESIGAQLDRIQRTANAVAELDVLAALA 566
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQIITG 799
++ N+ RP VD+ + Q+ I GRHPV++ +L + FVPNDT L+ + C IITG
Sbjct: 567 QVAAENNYCRPA-VDESD--QLTIVEGRHPVVEQMLKGSLFVPNDTTLNCGEDRCLIITG 623
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS Y+RQ ALI +MAQ+GSFVPA + V+D I+TR+GASD + G+STF+ E+
Sbjct: 624 PNMAGKSTYMRQNALIALMAQIGSFVPARECHVGVVDAIFTRIGASDDLSAGQSTFMVEM 683
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK---CMVLFVTHYPK 916
E + IL+N T++SLV++DE+GRGTST DG++IA A ++++ + K C LF THY +
Sbjct: 684 TEVAEILKNATSRSLVVLDEIGRGTSTFDGMSIARAVVEHISDPAKGLGCKTLFATHYHE 743
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ D++ +G V Y+++ K +D+T+L ++V G ++ S+G +VA+LA
Sbjct: 744 LTDLEGTISG-VKNYNIAV-----------KKRGEDITFLRRIVRGPADDSYGIEVAKLA 791
Query: 977 QLPPSCISRATVIAAKLEA 995
LP + RA + LEA
Sbjct: 792 GLPGTVTRRAHEVLRALEA 810
>gi|345884830|ref|ZP_08836230.1| DNA mismatch repair protein mutS [Prevotella sp. C561]
gi|345042329|gb|EGW46430.1| DNA mismatch repair protein mutS [Prevotella sp. C561]
Length = 886
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 260/952 (27%), Positives = 438/952 (46%), Gaps = 174/952 (18%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------ 139
+K TP+ +Q +K ++P L++ G + +GEDA +A++LGI +N
Sbjct: 5 DKGLTPMMKQFFSMKAQHPGALMLFRCGDFYETYGEDAVESARILGITLTRRNNGGSGDS 64
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 65 IEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREAIKGKKGLSAMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + +++V + E+N+L V FG G GV ++I
Sbjct: 125 LVTPG-VAMSDNVLNYK-----ENNFLAAVH-------------FGKG---SCGVSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E +L + P E+L + ++ E+ Y G R+
Sbjct: 163 STGEFLTGEGTFDYV----EKLLGNFQPKEVLFDRAKKQEFER----YFG----TRLCTF 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D ++ A L ++ G L + V N A I+ Q L
Sbjct: 211 EMDDWVFTDQTAR-QKLLKHFGTKNL-----KGFGVDHLNNGIVAAGSIL-------QYL 257
Query: 373 ALT----IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGT 427
+T I H+ S + + + T++ LE++ N +GS +
Sbjct: 258 EITQHTHINHI------------TSLARIEEDKYVRMDRFTIRSLELIAPMNEDGS---S 302
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL+++++T+T G R+LRRW+ PL D I+ RLD V
Sbjct: 303 LLNVIDNTVTPMGGRMLRRWMVFPLKDEKPINERLDVV---------------------- 340
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI-------- 539
D EP F ++ +G D++R I+++ +P E + + A+
Sbjct: 341 --DYLFREPDFRECINEQFHRIG---DLERIISKVAVGRVSPREVVQLKNALMAIQPVKT 395
Query: 540 --LYAGKQL-----QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTV 592
LYA +QL++ R+++ + + A P ++ K
Sbjct: 396 ACLYAKSDTLKRIGEQLNLCESLRDRIEKE-----------IQADPPQLVAKGN------ 438
Query: 593 NKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
+I+ G E+ R + K+ L + +Q G+ +L+ +
Sbjct: 439 --------------VIALGYNQELDDLRSIRDNGKQYLLEIQEKEVEQTGITSLKIGFNN 484
Query: 653 GITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ +E+ F KVP NW + + + RY +PE+ +++ A+E++ + +
Sbjct: 485 VFGYYLEVRNTFKDKVPENWIRKQTLAQAERYITPELKEYEEKILGADEKILALETQLYM 544
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+++ + + Q +A LDCL + +S+ + +VRPV VDD E + I GRHP
Sbjct: 545 ELIQDMQEFIPQIQINANLIAHLDCLLSFMKVSQMQRYVRPV-VDDSEVLDIK--QGRHP 601
Query: 771 VLDTILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
V++T L + +VPND L E + +ITGPNM GKS +RQ ALI ++AQ+G FVPA
Sbjct: 602 VIETQLPIGEQYVPNDVLLDTEHQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAE 661
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
A + ++D I+TR+GASD+I G STF+ E+ EAS IL N T +SLV+ DELGRGTST+D
Sbjct: 662 RARIGMVDKIFTRVGASDNISLGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYD 721
Query: 889 GVAIAYATLDYLLEHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMD 946
G++IA+A ++YL EH + LF THY ++ +++ F + ++VS
Sbjct: 722 GISIAWAIVEYLHEHSRAQARTLFATHYHELNEMEKNFP-RIKNFNVSV----------- 769
Query: 947 SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
+ D + ++ K+ G SE SFG VA++A +P S + RA +I +LE + S
Sbjct: 770 KEVDGKIIFVRKLEKGGSEHSFGIHVAEIAGMPRSIVKRANIILKELEKDNS 821
>gi|331084834|ref|ZP_08333922.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410928|gb|EGG90350.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 885
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 259/945 (27%), Positives = 441/945 (46%), Gaps = 157/945 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ QQ +E K +Y D +L +G + F +DA A+K L G L+
Sbjct: 8 TPMMQQYMETKKQYSDCILFYRLGDFYEMFFDDAITASKELEITLTGKNCGLEERAPMCG 67
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P ++ ++ RLV G+KV + +Q E P +A G R + + T T A+
Sbjct: 68 VPYHSVDSYLNRLVEKGYKVAICEQVE-------DPQQAKGIVKREVVRVVTAGTNMNAQ 120
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ ++ NY++C+V D R G+ ++STGD E +
Sbjct: 121 ALDETKN------NYIMCIV------------YIAD----RYGLAVADVSTGDYFVTELD 158
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
G R L+ + SP+E++ + ++ G L
Sbjct: 159 SG--RKLLDEIH-KFSPSEIICNESF---------------------------YMSGLDL 188
Query: 324 AEV-----MSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI----MNMPDLAVQALAL 374
++ M +Y DT +++ + ++ H +++EG+ N +A AL
Sbjct: 189 DDLRHRLGMMIY---SIDTHFFDDEMCARILKEHFHAASLEGMGLGDYNCGVIAAGALLK 245
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
+ ++ L I + M L +++ + LE+ + G+LL +++
Sbjct: 246 YLYETQKTSLSHI----THITGYATGRYMLLDSSSRRNLELCETLREKQKRGSLLWVLDK 301
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T G+R+LR ++ PL DR+ I RL+AV E+ D I
Sbjct: 302 TKTAMGARMLRSYIEQPLIDRHEIEQRLEAVEEL--------------------KDKAIS 341
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HIDG 553
+ LS V D++R I+R+ +++A P + I+ + L+ L HI
Sbjct: 342 REEIREYLSPVY-------DLERLISRVTYQSANPRDLISFRNS-------LEMLPHI-- 385
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIIS 609
K +H LL+++ + +LL+ E A +G II
Sbjct: 386 ----KYILTEMHEELLQQI---CEELDTLEDLYQLLNESIMEEPPLAMKEGG-----IIK 433
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VP 667
+G ++V R+A K L L R++ G+RNL+ + +E+ +K VP
Sbjct: 434 DGYDADVDMLRQAKTEGKNWLAQLEEEEREKTGIRNLKVKYNKVFGYYLEVTNAYKELVP 493
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+ + + R+ +P + D + A ++L + + Q
Sbjct: 494 DYYTRKQTLANAERFITPRLKELEDTILGAEDKLYALEYTLYCKVRDRIASEVLRVQKTA 553
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTN 786
+A+A +D +LA ++ N+VRP +E I I GRHPV++ + DN F+ NDT
Sbjct: 554 KAVAKIDVFTSLALVAERNNYVRPKI---NEKGLIDIKGGRHPVVEKMTPDNMFIANDTL 610
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L ++ IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA SA + + D I+TR+GASD
Sbjct: 611 LDDKKNRVSIITGPNMAGKSTYMRQSALIVLMAQIGSFVPADSANIGICDRIFTRVGASD 670
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
+ G+STF+ E+ E + ILRN T+ SL+I+DE+GRGTST DG++IA+A +++ + +KK
Sbjct: 671 DLASGQSTFMVEMTEVANILRNATSSSLLILDEIGRGTSTFDGLSIAWAVVEH-ISNKKL 729
Query: 907 M---VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
+ LF THY ++ +++ K SV Y ++ + D+ +L K+V G
Sbjct: 730 LGAKTLFATHYHELTELEGKL-DSVNNYCIAV-----------KEQGDDIVFLRKIVKGG 777
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQNRSAK 1007
++ S+G +VA+LA +P S I+RA I +L EA+++++V+ SA+
Sbjct: 778 ADKSYGIQVAKLAGVPESVIARAKEIVGELSEADITTKVREISAQ 822
>gi|325286832|ref|YP_004262622.1| DNA mismatch repair protein mutS [Cellulophaga lytica DSM 7489]
gi|324322286|gb|ADY29751.1| DNA mismatch repair protein mutS [Cellulophaga lytica DSM 7489]
Length = 875
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 268/961 (27%), Positives = 438/961 (45%), Gaps = 176/961 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASI 145
TPL QQ +KTKYPD +L+ VG + FG+DA A+K+LGI +N A
Sbjct: 13 TPLMQQYNAIKTKYPDAMLLFRVGDFYETFGDDAVKASKILGIICTHRNNGGEKTELAGF 72
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAED 204
P LN ++ +LV AG +V + Q E P + RG++ L T
Sbjct: 73 PHHSLNTYLPKLVKAGQRVAICDQLE-------DPKQTKKIVKRGVTELVTPG------- 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
V +D ++N +C V FG ++GV ++ISTG+ + E +
Sbjct: 119 VALNDDILSAKTNNFLCAVH------------FGRK---KIGVAFLDISTGEFLTSEGTE 163
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ +L + +P E+L+ SK +K L G + FI
Sbjct: 164 ----EQIDKLLQNFAPNEVLV----SKTHKKDFLKAFGTEFHT--------FFI------ 201
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
E E+ ++TL+ + N L + HL+Q
Sbjct: 202 EDWIFQEDYAQETLTKH--------------------FNTATLK----GFGVAHLEQ--- 234
Query: 385 ERIMCLGASFRSLSGSMEMTLS-ANTLQQLE----------VLRNNSNGSEYG----TLL 429
IM GA LS + L NTLQ++ ++N Y TLL
Sbjct: 235 -GIMASGAVLHYLSETQHHKLQHINTLQRIAEEEYIWMDRFTIKNLELYHSYNPNAVTLL 293
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ T++ G R+L+RW+ PL + I R ++ E + + T
Sbjct: 294 DVIDKTISPMGGRMLKRWLALPLKNVEKIKRR----HQVIEYLQANDT------------ 337
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQL 546
IL + S+ + D++R I+++ +P E + + ++AIL KQL
Sbjct: 338 -----------ILHKLQQSIKQMGDLERLISKVATAKISPKEVVQLKNSLEAILPV-KQL 385
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
+ K+ LH + R AK+ ++++A ++L
Sbjct: 386 TSSSKNDAV--KLIGDQLHGCDMLR--------------AKIKEMISEDAP--VNMLKGE 427
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK- 665
I+NG +E+ R S K+ L+ ++ ++ G+ +L+ S + + IE+ K
Sbjct: 428 TIANGYSAELDELRGLAFSGKDYLNKMLERETERTGITSLKIASNNVFGYYIEVRNTHKD 487
Query: 666 -VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP W + + RY + E+ ++ A E + ++ + + + Y A Q
Sbjct: 488 KVPEEWIRKQTLVNAERYITEELKEYESKILGAEERIQVLEQELFSKLVVWMQEYIAPVQ 547
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVP 782
Q +A LDCL L+ + + PV + + I +GRHPV++ L + ++
Sbjct: 548 HNAQLIAQLDCLCGFTQLATDNKYTAPVI---NNSTDLEIVNGRHPVIEKQLPVGETYIA 604
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND L+ E + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA +A++ +D I+TR+
Sbjct: 605 NDVTLNREEQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAEAAKIGYVDKIFTRV 664
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD+I G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL +
Sbjct: 665 GASDNISMGESTFMVEMNETASILNNLSERSLVLLDEIGRGTSTYDGISIAWAISEYLHQ 724
Query: 903 H-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
H + LF THY ++ ++ F+ + Y+VS + +V +L K+ P
Sbjct: 725 HPTQAKTLFATHYHELNEMTATFS-RIKNYNVSV-----------KELKDNVLFLRKLTP 772
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEA 1021
G SE SFG VA++A +P IS+A I KLE SS +L KL+D + E
Sbjct: 773 GGSEHSFGIHVAKMAGMPQQVISKANKILKKLEKSHSS--------EELTTKLTDAQNEM 824
Query: 1022 Q 1022
Q
Sbjct: 825 Q 825
>gi|402845929|ref|ZP_10894251.1| DNA mismatch repair protein MutS [Porphyromonas sp. oral taxon 279
str. F0450]
gi|402268844|gb|EJU18204.1| DNA mismatch repair protein MutS [Porphyromonas sp. oral taxon 279
str. F0450]
Length = 886
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 287/946 (30%), Positives = 427/946 (45%), Gaps = 187/946 (19%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TP+ +Q +E K K+PD +L+ VG + F +DA AA++LGI N A
Sbjct: 8 TPMMKQYMEFKAKHPDAILLFRVGDFYETFSDDAIAAAEILGITLTKRANGSAMHVELAG 67
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T
Sbjct: 68 FPHHALDTYLPKLVRAGRRVAICDQLEDPKLTKK------LVKRGITELVTPGV------ 115
Query: 205 VGGGEDGCGGESNYLVCV-VDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
V G E+NYL V + DG +G I ++ISTG+ V E
Sbjct: 116 VLGDNVLRSKENNYLAAVWLSSDGAMGSIS---------------LLDISTGEFVVSE-- 158
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF---IG- 319
G P + EK+L +Y V VE SR F IG
Sbjct: 159 ----------------------GTP--EHLEKLLSSYQ--PKEVLVERTSRSLFDKVIGY 192
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
G + EV ED + V +A G+ + L
Sbjct: 193 RGFIFEV---------------EDWSFAVENNRRKLTAHFGVQS---------------L 222
Query: 380 KQFGLER----IMCLGA-----------------SFRSLSGSMEMTLSANTLQQLEVLRN 418
K FGLE+ I GA + RS+ M L + T + LE+L +
Sbjct: 223 KGFGLEQRPASIAAAGAILNYLELTSHHEIGHITTLRSIDRLSYMRLDSFTFRSLEIL-S 281
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
N E +LL I++HT T G RLLR W++ PL D I R V+++ + RT+
Sbjct: 282 PMNREEGKSLLDIIDHTQTAMGGRLLRHWLSFPLIDLTEIHRRQSVVTDLVRTADLRRTT 341
Query: 479 ES--VGQHD-EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV 535
+G D E+ + +V + + TSLG+ I + S A
Sbjct: 342 SELLIGIGDLERMASKAVVGRISPREVRQLATSLGQVEQIG---------SLLASSDSAE 392
Query: 536 MQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE 595
+Q I AG+ LQ + GE + S H+ LT PA +G+ + VN
Sbjct: 393 LQKI--AGR-LQPM---GE----LISDIEHT-------LTEEPPAALGRGITIAPGVN-- 433
Query: 596 AADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT 655
SE+ R+ KE L L ++ G+ +L+ +
Sbjct: 434 ------------------SELDELRRLSSHGKEYLLELQRRESERTGIPSLKVSYNNVFG 475
Query: 656 HLIELPA--NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
+ IE+ + N KVP +W + + RY PE+ +++ A E + + + L
Sbjct: 476 YYIEVRSTHNDKVPEDWTRKQTLANAERYIFPELKEYEEKILGAEERIASLEGRLYSELL 535
Query: 714 KEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD 773
+ Q + +A LDCL +LA ++ + + PV VDD I I +GRHPV++
Sbjct: 536 VRLSRFVRPLQQDARVIAELDCLSSLAEVAVTERYACPV-VDD--GFVIDIRAGRHPVIE 592
Query: 774 TILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
L ++VPND +L E +ITGPNM GKS +RQ ALI ++AQ+GSFVPA +A
Sbjct: 593 KQLPFGQSYVPNDVHLDNEETQIMVITGPNMSGKSALLRQTALIVLLAQIGSFVPAEAAH 652
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
L + DGI+TR+GASD+I +G STF+ E+ EAS IL T +SLV+ DELGRGTST+DG++
Sbjct: 653 LGLTDGIFTRVGASDNISRGESTFMVEMQEASSILNALTPRSLVLFDELGRGTSTYDGIS 712
Query: 892 IAYATLDYLLE--HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKS 949
IA+A ++YL + H + LF THY ++ D++ + V Y+VS + ++ G M
Sbjct: 713 IAWAIIEYLHDNPHGRPKTLFATHYHELNDLEGRLE-RVKNYNVS---AREIDGRM---- 764
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
+L K+V G SE SFG +VA+L +P S RAT I +LE+
Sbjct: 765 ----LFLRKLVRGGSEHSFGIQVARLGGMPRSITDRATDILGQLES 806
>gi|392966904|ref|ZP_10332323.1| DNA mismatch repair protein MutS [Fibrisoma limi BUZ 3]
gi|387845968|emb|CCH54369.1| DNA mismatch repair protein MutS [Fibrisoma limi BUZ 3]
Length = 883
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 267/945 (28%), Positives = 438/945 (46%), Gaps = 162/945 (17%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
+++ T K TPL +Q ++K KYP LL+ VG + FGEDA A+K+LGI +N
Sbjct: 6 ATKPTKPAKETPLNRQYNQVKAKYPGALLLFRVGDFYETFGEDAIKASKILGITLTKRNN 65
Query: 140 FMT----ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALY 194
A P L+ H+ +LV AG +V + Q E P +A G RG++ L
Sbjct: 66 GGANEELAGFPHHALDTHLPKLVRAGERVAICDQLED-------PAQAKGIVRRGVTELV 118
Query: 195 TKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIST 254
T + ++V +NYL V FG D + G+ ++IST
Sbjct: 119 TPG-VSFNDNVLDTR-----RNNYLAAVH-------------FGKS-DDQFGIAFLDIST 158
Query: 255 GDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASR 314
G+ + + N ++ + +L S +P+E+L C R
Sbjct: 159 GEFLASQGNSAYI----DKLLQSFNPSEVLY-------------------------C-KR 188
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSN---NEDQNMDVPEQGNHRSAIEG--IMNMPDLAV 369
+ GG + Y TL + D + +Q ++++G I +PD +
Sbjct: 189 NRAEFGGLFGDKFHTY------TLEDWAFTYDFGYNFLKQHFQTTSLKGFGIEGLPD-GI 241
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
A + + +L + + + + R L + L T++ LE++ G L+
Sbjct: 242 IAAGVILHYLNETEHKDLQHIQRITR-LEEDRYVWLDRFTIRNLELVAAQQEGGV--PLI 298
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
I++ T+T G+RLLR+W+ PL ++ LI RL+ V + + Q DE
Sbjct: 299 QILDQTVTPMGARLLRKWLNLPLKEKALIEERLNMV-------------DLLHQDDE--- 342
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
+L ++ L + D++R ++++ R P E + + +++
Sbjct: 343 -----------LLEIMVGHLKQIGDLERLVSKVAVRRINPRELLQLKRSLQ--------- 382
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTA-----SSPAV------IGKAAKLLSTVNKEAAD 598
H +K L++TA SP++ + + L+ + E D
Sbjct: 383 ---------------HVLPIKELLITALSQKPESPSLKKYADQLNPVSFLIDRIEAELRD 427
Query: 599 QGDLLNLM--IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
L+ +I +G E+ K S K+ L L + ++ G+ +L+ +
Sbjct: 428 DPPTLSNQGNMIRSGVNPELDELHKIAYSGKDYLLQLQDREIQRTGISSLKIAYNKVFGY 487
Query: 657 LIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
+E+ K VP +W + + RY +PE+ D++ A E++ + + +
Sbjct: 488 YLEVTNAHKNRVPDDWIRKQTLVNAERYITPELKEYEDKILNAEEQIFSIESRMFSEMVM 547
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
G Y A Q + L+ LD L + A ++ +VRP E ++I GRHPV++
Sbjct: 548 AAGEYVAAIQQNARVLSVLDVLASFAHIALKNRYVRPEIT---ESKVLNIKDGRHPVIEQ 604
Query: 775 ILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
L + ++PND L E + IITGPNM GKS +RQ ALI +MAQ GSFVPASSAE+
Sbjct: 605 QLPPGEPYIPNDVYLDDETQQIVIITGPNMAGKSALLRQTALIVLMAQSGSFVPASSAEI 664
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
++D I+TR+GASD++ +G STF+ E+ E + IL N + +SLV++DE+GRGTST+DGV+I
Sbjct: 665 GLVDKIFTRVGASDNLSRGESTFMVEMTETASILNNLSERSLVLMDEIGRGTSTYDGVSI 724
Query: 893 AYATLDYLLEHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
A+A +YL H C LF THY ++ D+ + Y+V+ K MG
Sbjct: 725 AWAITEYLHNHSDCRPKTLFATHYHELNDLAND-NPRIKNYNVAV----KEMG------- 772
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
V +L K+ G SE SFG VAQ+A +P S ++RA I +LEA
Sbjct: 773 NKVIFLRKLQEGGSEHSFGIHVAQMAGMPGSVVNRAGQILKQLEA 817
>gi|374595151|ref|ZP_09668155.1| DNA mismatch repair protein MutS [Gillisia limnaea DSM 15749]
gi|373869790|gb|EHQ01788.1| DNA mismatch repair protein MutS [Gillisia limnaea DSM 15749]
Length = 874
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 266/940 (28%), Positives = 439/940 (46%), Gaps = 139/940 (14%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
K+ TPL +Q +K KYPD LL+ VG + FGEDA A++L I N
Sbjct: 7 KETTPLMKQYNAIKDKYPDALLLFRVGDFYETFGEDAVRTARILNIVLTKRGNGSEVETA 66
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A P LN ++ +LV AG +V + Q E + RG++ L T
Sbjct: 67 LAGFPHHALNTYLPKLVKAGLRVAICDQLEDPKMTK------TIVKRGVTELVTPG---- 116
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V ++ SN +C + FG LGV +++STG+ + +
Sbjct: 117 ---VSMNDEVLNSTSNNFLCAIH------------FGKK---NLGVSFLDVSTGEFLTAQ 158
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ ++ + +L + SP+E+L+ + K K G A + CF
Sbjct: 159 GSSEYI----DKLLQNFSPSEVLIQKNFKKDFSKTF----GDAFH---------CFYLED 201
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ ++ YE++ N N + EGI ++ A+ + +
Sbjct: 202 WIFKLDYAYESL-------NAHFNTKSLKGFGVDHLAEGI-----ISSGAILYYLGETQH 249
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L+ I AS ++ + + T++ LE+ ++N+ + TLL +++ T++ G
Sbjct: 250 HRLQHI----ASINRIAEEEYVWMDRFTIRNLELYQSNAQNAV--TLLDVIDQTISPMGG 303
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R+L+RW+ PL + I R V E+ P+
Sbjct: 304 RMLKRWLALPLKNAEKIRNRHKVVGHFIEN-----------------------RPE---- 336
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG-EYREKVT 560
L + + + D++R I+++ P E + + + L A ++ L +D E KV
Sbjct: 337 LDKIQQQIKKISDLERLISKVATGKICPREVLHLNNS-LEAIVPIKSLAMDSSEEALKVI 395
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
L + + R+ K+ T++++A ++L I+ G E+ R
Sbjct: 396 GDKLQNCEVLRI--------------KIKETLHEDAP--VNILKGNTIAKGFHPELDELR 439
Query: 621 KAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKK 678
S KE LD ++ K G+ +L+ S + + IE+ + K VP W + +
Sbjct: 440 ALAFSGKEYLDGMLQRETKATGISSLKIGSNNVYGYYIEVRNSHKDKVPEAWIRKQTLVN 499
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
RY + E+ ++ A E++ + +A + + G Y Q + +A LDCL +
Sbjct: 500 AERYITEELKEYEGKILGAEEKIQQLEQAIFGKLVDWLGDYIQPVQQNARLVAQLDCLCS 559
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQI 796
A + ++N+ PV +DD +++ I GRHPV++ L +++V ND L E + +
Sbjct: 560 FACHAISENYTEPV-IDD--SLELEIKDGRHPVIEKQLPMGESYVTNDLFLDRETQQIIM 616
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNM GKS +RQ ALI ++AQ+GSFVPA SA + ++D I+TR+GASD+I G STF+
Sbjct: 617 ITGPNMSGKSAILRQTALIVLLAQMGSFVPAKSARIGLIDKIFTRVGASDNISMGESTFM 676
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLFVTHYP 915
E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL EH + LF THY
Sbjct: 677 VEMNETASILNNISNRSLVLLDEIGRGTSTYDGISIAWAITEYLHEHPARPKTLFATHYH 736
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQ 974
++ D+ F + Y+VS K +D V +L K+V G SE SFG VA+
Sbjct: 737 ELNDMGETFK-RIKNYNVSV------------KELKDTVLFLRKLVAGGSEHSFGIHVAK 783
Query: 975 LAQLPPSCISRATVIAAKLEA----EVSSRVQNRSAKRDL 1010
+A +P ISRA I KLE E S + SA+RD+
Sbjct: 784 MAGMPQQVISRANKILKKLEKSHQIENSGEILRNSAERDM 823
>gi|255306973|ref|ZP_05351144.1| DNA mismatch repair protein [Clostridium difficile ATCC 43255]
Length = 947
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 262/936 (27%), Positives = 439/936 (46%), Gaps = 168/936 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q +E+K +Y D +L +G + F EDA +A+K L G L+
Sbjct: 7 KLTPMMKQYLEVKNRYKDCILFFRLGDFYEMFFEDALVASKALEIALTGKACGLEERAPM 66
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P N ++ +LV G+KV + +Q E P A G R + + T T
Sbjct: 67 CGVPFHSANSYISKLVENGYKVAIGEQME-------DPSTAKGIVRREVIRVITPGT--- 116
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V G ++NYL+ + D N+ G+ V+ISTG+
Sbjct: 117 ---VLDGNLLENKKNNYLLSLYKDGTNI----------------GLTYVDISTGETNATC 157
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N+ + +E + + P E+++ EK L SN+ + + D ++
Sbjct: 158 LNEDKV---IEEIA-KIHPTEIIINDL--DFIEK--LRDIATVSNIYINESFSDNYLDIN 209
Query: 322 ALAEVM-SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
L E +Y Q + ++G +S++ ++N + + I ++
Sbjct: 210 ILKEYFPDVYL------------QKLKFDDKGLIKSSLSILLNYIYNTQKQITSNINNIN 257
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ M L R+ ++E+T + +R N G+LLH+++ T T G
Sbjct: 258 IYNSSEYMVLDMFTRT---NLELT---------QTIRGNKKK---GSLLHVLDKTSTAMG 302
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLR++V PL +++ I RLD + EI + +
Sbjct: 303 GRLLRKYVEEPLINKSKIENRLDVIEEIKDD----------------------------F 334
Query: 501 ILSSVLTSLGRSP-DIQRGITRIFHRTATPSEFIAVMQAI-----LYAGKQLQQLHIDGE 554
IL L + ++ DI+R +I TP E I + +I L L I E
Sbjct: 335 ILREDLNDILKNIYDIERICGKIAFERVTPKELIHLKNSIEKLPNLKDTINLSNAKILKE 394
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM--IISNGQ 612
Y ++ L+ IL P + K ++ +D D L + I NG
Sbjct: 395 YVSEMDKLDDIYNLIDEAIL--EEPTITIKDGNIIK------SDFSDELKELREISKNGA 446
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFKVPLN 669
F + + N R++ G+++L+ F V G + IE+ ANFK
Sbjct: 447 FL---------------VKEIENREREKTGVKSLKIGFNKVFG--YYIEITKANFK---- 485
Query: 670 WAKVNST---KKTI----RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
AK++ T K+T+ RY +PE+ +++ A E++ ++ F++ Y
Sbjct: 486 QAKLDETYIRKQTLSNAERYITPELKEIEEKILHAEEKIK---SLEYEIFVEIRDTIYKN 542
Query: 723 F---QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LD 778
Q + +A +D +LAT++ N+V+P +E ++ I +GRHPV++ I+ +
Sbjct: 543 IDRIQKVAKTIANIDVFVSLATVAHINNYVKPAI---NENNKLDIRNGRHPVVENIVGEE 599
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
NFVPNDT L+ IITGPNM GKS Y+RQ A+I +MA +GSFVPA SA++ +LD I
Sbjct: 600 NFVPNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAESADIPILDRI 659
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TR+GASD + QG+STF+ E+NE S IL+N T +SLVI+DE+GRGTST+DG+++A++ ++
Sbjct: 660 FTRVGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTSTYDGISLAWSIVE 719
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
Y+ ++ +C LF THY ++ D++ +F V Y ++ + + + +L K
Sbjct: 720 YIQKNIRCKTLFATHYHELTDLEEEFK-EVKNYSIAV-----------KEDGEGIIFLRK 767
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++P ++ S+G VA+LA+LP I RA I LE
Sbjct: 768 IIPQGADKSYGIYVAKLAKLPDEVIERAKYILKDLE 803
>gi|254975573|ref|ZP_05272045.1| DNA mismatch repair protein [Clostridium difficile QCD-66c26]
gi|255092961|ref|ZP_05322439.1| DNA mismatch repair protein [Clostridium difficile CIP 107932]
gi|255314702|ref|ZP_05356285.1| DNA mismatch repair protein [Clostridium difficile QCD-76w55]
gi|255517377|ref|ZP_05385053.1| DNA mismatch repair protein [Clostridium difficile QCD-97b34]
gi|255650483|ref|ZP_05397385.1| DNA mismatch repair protein [Clostridium difficile QCD-37x79]
gi|260683593|ref|YP_003214878.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260687253|ref|YP_003218387.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|384361214|ref|YP_006199066.1| DNA mismatch repair protein mutS [Clostridium difficile BI1]
gi|400927376|ref|YP_001088483.2| DNA mismatch repair protein MutS [Clostridium difficile 630]
gi|423089220|ref|ZP_17077582.1| DNA mismatch repair protein MutS [Clostridium difficile
70-100-2010]
gi|347595678|sp|Q187T6.2|MUTS_CLOD6 RecName: Full=DNA mismatch repair protein MutS
gi|260209756|emb|CBA63548.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260213270|emb|CBE04805.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|328887644|emb|CAJ68852.2| DNA mismatch repair protein MutS [Clostridium difficile 630]
gi|357558356|gb|EHJ39850.1| DNA mismatch repair protein MutS [Clostridium difficile
70-100-2010]
Length = 947
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 262/936 (27%), Positives = 439/936 (46%), Gaps = 168/936 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q +E+K +Y D +L +G + F EDA +A+K L G L+
Sbjct: 7 KLTPMMKQYLEVKNRYKDCILFFRLGDFYEMFFEDALVASKALEIALTGKACGLEERAPM 66
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P N ++ +LV G+KV + +Q E P A G R + + T T
Sbjct: 67 CGVPFHSANSYISKLVENGYKVAIGEQME-------DPSTAKGIVRREVIRVITPGT--- 116
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V G ++NYL+ + D N+ G+ V+ISTG+
Sbjct: 117 ---VLDGNLLENKKNNYLLSLYKDGTNI----------------GLTYVDISTGETNATC 157
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N+ + +E + + P E+++ EK L SN+ + + D ++
Sbjct: 158 LNEDKV---IEEIA-KIHPTEIIINDL--DFIEK--LRDIATVSNIYINESFSDNYLDIN 209
Query: 322 ALAEVM-SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
L E +Y Q + ++G +S++ ++N + + I ++
Sbjct: 210 ILKEYFPDVYL------------QKLKFDDKGLIKSSLSILLNYIYNTQKQITSNINNIN 257
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ M L R+ ++E+T + +R N G+LLH+++ T T G
Sbjct: 258 IYNSSEYMVLDMFTRT---NLELT---------QTIRGNKKK---GSLLHVLDKTSTAMG 302
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLR++V PL +++ I RLD + EI + +
Sbjct: 303 GRLLRKYVEEPLINKSKIENRLDVIEEIKDD----------------------------F 334
Query: 501 ILSSVLTSLGRSP-DIQRGITRIFHRTATPSEFIAVMQAI-----LYAGKQLQQLHIDGE 554
IL L + ++ DI+R +I TP E I + +I L L I E
Sbjct: 335 ILREDLNDILKNIYDIERICGKIAFERVTPKELIHLKNSIEKLPNLKDTINLSNAKILKE 394
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM--IISNGQ 612
Y ++ L+ IL P + K ++ +D D L + I NG
Sbjct: 395 YVSEMDKLDDIYNLIDEAIL--EEPTITIKDGNIIK------SDFSDELKELREISKNGA 446
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFKVPLN 669
F + + N R++ G+++L+ F V G + IE+ ANFK
Sbjct: 447 FL---------------VKEIENREREKTGVKSLKIGFNKVFG--YYIEITKANFK---- 485
Query: 670 WAKVNST---KKTI----RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
AK++ T K+T+ RY +PE+ +++ A E++ ++ F++ Y
Sbjct: 486 QAKLDETYIRKQTLSNAERYITPELKEIEEKILHAEEKIK---SLEYEIFVEIRDTIYKN 542
Query: 723 F---QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LD 778
Q + +A +D +LAT++ N+V+P +E ++ I +GRHPV++ I+ +
Sbjct: 543 IDRIQKVAKTIANIDVFVSLATVAHINNYVKPAI---NENNKLDIRNGRHPVVENIVGEE 599
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
NFVPNDT L+ IITGPNM GKS Y+RQ A+I +MA +GSFVPA SA++ +LD I
Sbjct: 600 NFVPNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAESADIPILDRI 659
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TR+GASD + QG+STF+ E+NE S IL+N T +SLVI+DE+GRGTST+DG+++A++ ++
Sbjct: 660 FTRVGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTSTYDGISLAWSIVE 719
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
Y+ ++ +C LF THY ++ D++ +F V Y ++ + + + +L K
Sbjct: 720 YIQKNIRCKTLFATHYHELTDLEEEFK-EVKNYSIAV-----------KEDGEGIIFLRK 767
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++P ++ S+G VA+LA+LP I RA I LE
Sbjct: 768 IIPQGADKSYGIYVAKLAKLPDEVIERAKYILKDLE 803
>gi|401883891|gb|EJT48075.1| hypothetical protein A1Q1_02991 [Trichosporon asahii var. asahii CBS
2479]
Length = 987
Score = 292 bits (748), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 275/490 (56%), Gaps = 36/490 (7%)
Query: 513 PDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRL 572
PD+ RG+TR + TP+E A++ ++ I E+R + + S LL L
Sbjct: 489 PDLVRGLTRAQYGKTTPNELSAILTGLV---------RISTEFRPE-NANGFRSDLLNDL 538
Query: 573 ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDS 632
+ P + A+ LL+ +N +AA + D + ++ + A+ + ELD
Sbjct: 539 VRKL--PTIKDAASDLLAALNMKAA-KNDEEAALWQDQDRYPAIQDAKDCIDVCTMELDQ 595
Query: 633 LINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTA 690
+ +K LG +L++++V+GI LIE+P VP W KV+ TK RYH+PEV+
Sbjct: 596 HLAQVKKALGRPHLKYVTVAGIEFLIEMPHRDAKIVPPKWVKVSGTKAVSRYHTPEVINI 655
Query: 691 LDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVR 750
E L + + A+ +F +E + EF + LA +DCL +LA +++ +V+
Sbjct: 656 --------ETLALEAKGAFKAFQEEVA-EHREFLVVARELAVIDCLTSLANVAQANGYVK 706
Query: 751 PVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIR 810
P FV EP + I GRHP+++ + D +VP D + + ++ITGPNM GKS +R
Sbjct: 707 PTFV--AEPC-LRIKDGRHPMVEALRDDQYVPFDISFGDKEGRAKVITGPNMAGKSSCVR 763
Query: 811 QVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCT 870
VAL+ MAQ+GSFVPASS L + D + TRMGASD I +G+STF+ E+ E S ILR T
Sbjct: 764 AVALMVCMAQMGSFVPASSMTLGIHDAVQTRMGASDEISRGKSTFMVEMTETSDILRTVT 823
Query: 871 AQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGT 930
++LV++DELGRGTST DGVAIAYATL +L LFVTHYP ++ ++ +++ +V
Sbjct: 824 PRTLVVLDELGRGTSTFDGVAIAYATLSHLAAL-DIPTLFVTHYPLLSRLEAEYS-TVSN 881
Query: 931 YHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIA 990
+H+++ GP ++T+LYK+ G++++SFG A+LA LP + A +
Sbjct: 882 WHMAFTEMPGPSGP-------EITFLYKLRRGLADASFGIWCARLAGLPDELLETAQEKS 934
Query: 991 AKLEAEVSSR 1000
++ E R
Sbjct: 935 ERMREETRDR 944
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 163/340 (47%), Gaps = 39/340 (11%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q + +K ++P VLLM+E + R G + + + ++ + + +
Sbjct: 173 YTPLEKQYMAIKERWPGVLLMLEEILRRRRKGTVLLLGPANVRLPRENSASWHSRTATST 232
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL--EAAEDVG 206
RL RL++ G+KVGVV QTETAA+K G + PF R L+ LYT +T E++
Sbjct: 233 RLR---SRLISLGYKVGVVSQTETAALKKVGDNRNAPFTRELTHLYTSSTYVEESSASSS 289
Query: 207 GGEDG------CGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
D + LV +V+D D R+ +V+V TG+V+
Sbjct: 290 TVRDAPVVPGTASPSTGALVTIVED------------ADDKRSRIALVSVIPGTGEVLT- 336
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML--LAYAGPASNVRVECASRDCFI 318
+D +R+ LE L L PAELLL LSK+T+K++ L ++VR E + +
Sbjct: 337 --SDSRIRNELETRLTHLQPAELLLPDDLSKETKKVIDHLTVGRSTADVRKERVDQVDYT 394
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
A + Y+ L+ +++ D + + + ++ ++N P V AL++ +++
Sbjct: 395 --TAFDYLTQFYKEREAIDLTREDEEMGDEASREDGEANVDELVNFPKPVVVALSMVVKY 452
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN 418
I + ++ + ++E ++ N+ Q+E LRN
Sbjct: 453 --------ISADSSDLKARADAIEEIITTNSY-QVEKLRN 483
>gi|406696248|gb|EKC99541.1| hypothetical protein A1Q2_06157 [Trichosporon asahii var. asahii CBS
8904]
Length = 987
Score = 292 bits (748), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 275/490 (56%), Gaps = 36/490 (7%)
Query: 513 PDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRL 572
PD+ RG+TR + TP+E A++ ++ I E+R + + S LL L
Sbjct: 489 PDLVRGLTRAQYGKTTPNELSAILTGLV---------RISTEFRPE-NANGFRSDLLNDL 538
Query: 573 ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDS 632
+ P + A+ LL+ +N +AA + D + ++ + A+ + ELD
Sbjct: 539 VRKL--PTIKDAASDLLAALNMKAA-KNDEEAALWQDQDRYPAIQDAKDCIDVCTMELDQ 595
Query: 633 LINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTA 690
+ +K LG +L++++V+GI LIE+P VP W KV+ TK RYH+PEV+
Sbjct: 596 HLAQVKKALGRPHLKYVTVAGIEFLIEMPHRDAKIVPPKWVKVSGTKAVSRYHTPEVINI 655
Query: 691 LDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVR 750
E L + + A+ +F +E + EF + LA +DCL +LA +++ +V+
Sbjct: 656 --------ETLALEAKGAFKAFQEEVA-EHREFLVVARELAVIDCLTSLANVAQANGYVK 706
Query: 751 PVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIR 810
P FV EP + I GRHP+++ + D +VP D + + ++ITGPNM GKS +R
Sbjct: 707 PTFV--AEPC-LRIKDGRHPMVEALRDDQYVPFDISFGDKEGRAKVITGPNMAGKSSCVR 763
Query: 811 QVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCT 870
VAL+ MAQ+GSFVPASS L + D + TRMGASD I +G+STF+ E+ E S ILR T
Sbjct: 764 AVALMVCMAQMGSFVPASSMTLGIHDAVQTRMGASDEISRGKSTFMVEMTETSDILRTVT 823
Query: 871 AQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGT 930
++LV++DELGRGTST DGVAIAYATL +L LFVTHYP ++ ++ +++ +V
Sbjct: 824 PRTLVVLDELGRGTSTFDGVAIAYATLSHLAAL-DIPTLFVTHYPLLSRLEAEYS-TVSN 881
Query: 931 YHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIA 990
+H+++ GP ++T+LYK+ G++++SFG A+LA LP + A +
Sbjct: 882 WHMAFTEMPGPSGP-------EITFLYKLRRGLADASFGIWCARLAGLPDELLETAQEKS 934
Query: 991 AKLEAEVSSR 1000
++ E R
Sbjct: 935 ERMREETRDR 944
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 162/340 (47%), Gaps = 39/340 (11%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q + +K ++P VLLM+E + R G + + + ++ + + +
Sbjct: 173 YTPLEKQYMAIKERWPGVLLMLEEILRRRRKGTVLLLGPANVRLPRENSASWHSRTATST 232
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL--EAAEDVG 206
RL RL++ G+KVGVV QTETAA+K G + PF R L+ LYT +T E++
Sbjct: 233 RLR---SRLISLGYKVGVVSQTETAALKKVGDNRNAPFTRELTHLYTSSTYVEESSASSS 289
Query: 207 GGEDG------CGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
D + LV +V+D D R+ +V+V TG+V+
Sbjct: 290 TVRDAPVVPGTASPSTGALVTIVED------------ADDKRSRIALVSVIPGTGEVLT- 336
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML--LAYAGPASNVRVECASRDCFI 318
+D +R+ LE L L PAELLL LSK+T K++ L ++VR E + +
Sbjct: 337 --SDSRIRNELETRLTHLQPAELLLPDDLSKETRKVIDHLTVGRSTADVRKERVDQVDYT 394
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
A + Y+ L+ +++ D + + + ++ ++N P V AL++ +++
Sbjct: 395 --TAFDYLTQFYKEREAIDLTREDEEMGDEASREDGEANVDELVNFPKPVVVALSMVVKY 452
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN 418
I + ++ + ++E ++ N+ Q+E LRN
Sbjct: 453 --------ISADSSDLKARADAIEEIITTNSY-QVEKLRN 483
>gi|367008344|ref|XP_003678672.1| hypothetical protein TDEL_0A01290 [Torulaspora delbrueckii]
gi|359746329|emb|CCE89461.1| hypothetical protein TDEL_0A01290 [Torulaspora delbrueckii]
Length = 1225
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 256/956 (26%), Positives = 418/956 (43%), Gaps = 111/956 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P+ P TL PSS K+TP E+Q E+K+K D ++ + G F + +DA +
Sbjct: 279 PQYDPRTLY---IPSSAWN---KFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDAML 332
Query: 126 AAKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA 183
+ L I N A IP + + + G+KV V Q E+ K G
Sbjct: 333 GNHLFDLKIAGGGRANMQLAGIPEMSFDYWASQFIQRGYKVAKVDQRESMLAKEMREGSK 392
Query: 184 GPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDV 243
G R L + T TL G + Y + V ++ GN + N G
Sbjct: 393 GIVKRELQYVLTSGTLTE------GNMLQSDLATYCLAVREESGNFYDLENDNQSPGVAP 446
Query: 244 R--LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAY 300
+ GV ++ +TG++ EF D + L+ ++ ++P E+++ + LS K++
Sbjct: 447 KRLFGVAFIDTATGELNLVEFEDDDECTKLDTIMSQVNPKEVIMEKDNLSSLAHKIIKFN 506
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
A P + + E G D S D + P++ + ++
Sbjct: 507 AAPQAIYNY----------------IKPDTEFYGYDKTSKELDDSKYFPDKSQWPAILKQ 550
Query: 361 IMNM-PDLAVQALALTIRHLKQFGL-ERIMCLG--ASFRSLSGSMEMTLSANTLQQLEVL 416
+ A + +L+ L E ++ +G + + + TLQ LE+
Sbjct: 551 YYEQGKKIGFSAFGGLLYYLQWLKLDESLISMGNVKEYNPTQFQNSLVMDGVTLQNLEIF 610
Query: 417 RNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYR 476
N+ +G++ GTL + N ++ G R++++W+ HPL + I+ RLD V + S G+ R
Sbjct: 611 TNSFDGTDKGTLFKLFNKAISPMGKRMMKKWLMHPLLKQKDINKRLDTVESLM-SDGNLR 669
Query: 477 TSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVM 536
+L S L PD++R ++R+ EF +
Sbjct: 670 D-----------------------LLESTFAQL---PDLERTLSRVHSGNLKVKEFDKTI 703
Query: 537 QAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTV--NK 594
Q LQ K++S +L +L + +S P + + S +
Sbjct: 704 QGFEAVVDLLQ----------KMSSHSLEGSLSDYV---SSIPKSLFVDVENWSNAFDRE 750
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
+A ++G +++ G E + ++ +++L+ L+ +KQ NL++
Sbjct: 751 KAVNEG----ILLPHRGVEPEFDESVDKIKELEDQLEDLLKAYKKQFKCSNLQYKDCGKE 806
Query: 655 THLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
+ IE+P + +P NW ++ + K T RY+S EV +A A E ++
Sbjct: 807 IYTIEVPVSVSKYIPSNWVQMAANKSTKRYYSDEVRVLARSVAEARELHKVLEEELRTRL 866
Query: 713 LKEFGGYYA-EFQAAVQALAALDCLHALATLSRNKNF--VRPVFVD--DHEPVQ-----I 762
K+F +Y + VQA+A++DCL AL S + +F RP VD DHE +
Sbjct: 867 CKKFDMHYGTSWMPTVQAIASIDCLLALVRTSESLSFPYCRPTLVDELDHETGAKLNGFL 926
Query: 763 HICSGRHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
S RHP L T +F+PND L + ++TG N GKS +R + IMAQ
Sbjct: 927 KFKSLRHPCFNLGTTTSKDFIPNDVELGKDCPQLGLLTGANAAGKSTVLRMTCVAVIMAQ 986
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G +VP SA L +D I TR+GASD+I QG+STF EL+E IL T +SL+++DEL
Sbjct: 987 MGCYVPCESAILTPMDRIMTRLGASDNIMQGKSTFFVELSETKKILDLATNRSLLVLDEL 1046
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTG--SVGTYHVSYLTS 938
GRG S+ DG AIA L ++ H + + F THY A + F G V +S +
Sbjct: 1047 GRGGSSSDGFAIAEGVLHHVATHIQSLGFFATHY---ASLGQSFKGHPQVRPLKMSIMVD 1103
Query: 939 HKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
K + V +LYK+V G SE SFG VA + + + A V AA +E
Sbjct: 1104 EKT---------RTVAFLYKLVDGQSEGSFGMHVASMCGIAEEIVDNAQVAAASME 1150
>gi|189347201|ref|YP_001943730.1| DNA mismatch repair protein MutS [Chlorobium limicola DSM 245]
gi|254766620|sp|B3EEE1.1|MUTS_CHLL2 RecName: Full=DNA mismatch repair protein MutS
gi|189341348|gb|ACD90751.1| DNA mismatch repair protein MutS [Chlorobium limicola DSM 245]
Length = 871
Score = 292 bits (747), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 265/922 (28%), Positives = 417/922 (45%), Gaps = 122/922 (13%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S++ K+++P+ +Q +++K +YPD LL+ VG + F +DA A L I N
Sbjct: 2 SAKGVSEKEHSPMMRQYLDVKDRYPDYLLLFRVGDFYETFFDDAREVAAALNIVLTRRSN 61
Query: 140 FM-TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
+ A P ++ +LV G+KV V Q E A+ G R ++ + T
Sbjct: 62 EIPMAGFPHHASEGYIAKLVKKGYKVAVCDQVEDPAVAK------GIVRREITDIITPGV 115
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ + + NYL +V VG R V G F DV
Sbjct: 116 TYSDSILDDRHN------NYLCAIVF--LRVG--RQTVCGAAFI-------------DVT 152
Query: 259 YGEFN-DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY-AGPASNVRVECASRDC 316
GEF G L L SL PAELL+ +++E + A AG A V E R
Sbjct: 153 TGEFRIAGLLPEDASVFLRSLHPAELLVSAADRERSETLRHALPAGTAFTVLDEWLFR-- 210
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
E+Q ++ + +++G + A Q A I
Sbjct: 211 -------------------------EEQAGEILARQFRTHSLKGFGIHDNPAGQVAAGVI 245
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
H + + + L MTL T + LE++ + +GS G+LL +++ T
Sbjct: 246 LHYLEETRQSSLQYITRITPLQSGDYMTLDLQTKRNLEIISSMQDGSINGSLLQVIDRTR 305
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
G+RLLR+W+ PL I+ RLDAV E+ + M +R
Sbjct: 306 NPMGARLLRQWLQRPLLRAADITMRLDAVDEL-KKMKPFR-------------------- 344
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
SV LG+ D++R + RI A P E + G L + + +
Sbjct: 345 ------ESVCCDLGQISDLERALARIATLRAIPRE-------VRQLGSALAVIPLLKQSF 391
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
+ SK L S I A P + A + S V+ EA + + I G E+
Sbjct: 392 QDTVSKRLCS------IADALMP-LPDLVAMIESAVDPEAG--ASMRDGGYIRKGYHQEL 442
Query: 617 ARARKAVQSAKEELDSLINMCRKQ--LGMRNLEFMSVSGITHLIELPANFKVPLNWAKVN 674
R+ +AKE L + R++ +G ++F V G I KVP + K
Sbjct: 443 DDLRQTASTAKERLLEIQQEERERTAIGSLKVQFNRVFGYYIEISKANRDKVPPYYEKKQ 502
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ R+ P + +++ A E ++ + + + G+ Q +A +D
Sbjct: 503 TLVNAERFTIPALKEYEEKILNAEERSLVLEQQLFQALCCRIAGHAEVIQENAALIAEID 562
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNLHAERE 792
CL A A + + +P+ E + I +GRHPVL+ IL + ++ ND L +R+
Sbjct: 563 CLAAYAVCADEYGYCKPLIA---EHTGLRILNGRHPVLERILPADEPYIANDA-LFDDRQ 618
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
+ITGPNM GKS Y+RQ LI ++AQ G FVPA AE+ V+D I+TR+GASD++ G
Sbjct: 619 KMLMITGPNMAGKSSYLRQTGLIVLLAQAGCFVPAEQAEIGVVDRIFTRVGASDNLASGE 678
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STFL E+NEA+ IL N TA+SL+++DE+GRGTST+DG+AIA++ +Y+ LF T
Sbjct: 679 STFLVEMNEAADILNNATAKSLLLLDEIGRGTSTYDGLAIAWSMCEYIHRQIGARTLFAT 738
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++A+++ G V Y+ S L +S V +L K+V G S++S+G +V
Sbjct: 739 HYHELAELEGLLPGVV-NYNASVL-----------ESGDRVIFLRKIVRGASDNSYGIEV 786
Query: 973 AQLAQLPPSCISRATVIAAKLE 994
A+++ +P + I+RA I A +E
Sbjct: 787 ARMSGMPSAVITRAKAILAGME 808
>gi|269926487|ref|YP_003323110.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
gi|269790147|gb|ACZ42288.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
Length = 862
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 254/929 (27%), Positives = 421/929 (45%), Gaps = 148/929 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH----LDHNFMTASI 145
TP QQ + +K +YPD +L +G + F EDA++ + L I A +
Sbjct: 3 TPARQQYLRIKQQYPDAILFFRLGDFYETFDEDAKIVSSELDIVLTSREVRGKKIPMAGV 62
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDV 205
P ++ +L+ G KV + Q P R ++ + T T++ +
Sbjct: 63 PYHAAEGYIAKLIANGHKVAICDQI-------GEPDGKNLVERKVTRVLTPGTVDHPSLI 115
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
+ NYL+ + F G R+G+ ++STGD E
Sbjct: 116 EAQRN------NYLMALC-------------FSRG---RVGLAFADVSTGDFYATEITGE 153
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSK---QTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + + P+E+L+ + K E + + +G + + V
Sbjct: 154 DRLDKLRDEITRIQPSEVLVSEGPDKVHTSEEHVWMKQSGHPAQITV------------- 200
Query: 323 LAEVMSLYENMGEDT-LSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
E ++ D+ LS + Q+++ G+ +MP +A+++ ++++
Sbjct: 201 -LESWKWKTDVARDSVLSLTDAQSLEAF----------GLDSMP-VALKSAGALVQYISD 248
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ L + M L T + LE++ ++ G + +LL +++HT T G+
Sbjct: 249 TNPAALSTLRPPSTYFLSNF-MPLDDRTRRNLELI-ESTRGDKSLSLLAVLDHTSTAMGA 306
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSE-IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R+LR W+ PL + I RL+ V E +A S R E++ Q
Sbjct: 307 RMLRNWINQPLISKESIENRLNRVQEFVAHSEARERIREALKQ----------------- 349
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHIDGEYRE 557
D++R R+ +T TP E ++ ++ I + LQQ ++ +
Sbjct: 350 -----------VSDLERLANRLVQKTITPRELRSLALSLEKIPELVQILQQCNMQLQV-- 396
Query: 558 KVTSKTLHS-ALLKRLILTA---SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
++H+ + LIL+A PAV G II G
Sbjct: 397 -----SIHNFQHIVDLILSALVDDPPAVRGSGT--------------------IIREGYS 431
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWA 671
E+ R R A +AK+ + SL R+ G++NL + IE+ +FK VP +
Sbjct: 432 QELDRLRSASTNAKQWIASLERKEREATGIKNLRIGYNKVFGYYIEVTNSFKHLVPDRYI 491
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANE-ELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + R+ +PE L + L L ++ E + D + G + + + +
Sbjct: 492 RKQTLVGAERFITPE-LKEYESLILNSQTEAETIEEQLLDELITRIAGEAGKIFSTARQI 550
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAE 790
A +DC +LA + +VRP+ +D I I GRHPV++ + FVPND L E
Sbjct: 551 AEIDCYVSLAEAAVRHQYVRPIVSEDD---VIEIKGGRHPVVELRASEGFVPNDAFLDQE 607
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
I+TGPNM GKS Y+RQVALI +MAQ+GSFVPA SA + ++D I+TR+GA D I
Sbjct: 608 THQVLILTGPNMAGKSTYLRQVALITLMAQIGSFVPADSARIGIVDRIFTRVGAQDDIAS 667
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMV 908
G+STF+ E+ E +YIL +CT +SLVI+DE+GRGTST+DG+AIA A ++YL + +
Sbjct: 668 GQSTFMVEMTETAYILAHCTPKSLVILDEIGRGTSTYDGMAIAQAVVEYLHNNTRTRART 727
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ ++ +F V + + L + DV +L KVVPG ++ S+
Sbjct: 728 LFATHYHELTSLE-EFLPRVKNFRMEVL-----------EEGNDVVFLRKVVPGGADKSY 775
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEV 997
G VA+LA +P S I RA + +LEA++
Sbjct: 776 GIHVAKLAGIPKSVIRRAQELLKELEAQL 804
>gi|308198192|ref|XP_001387139.2| Mismatch repair ATPase MSH6 (MutS family) [Scheffersomyces stipitis
CBS 6054]
gi|149389076|gb|EAZ63116.2| Mismatch repair ATPase MSH6 (MutS family) [Scheffersomyces stipitis
CBS 6054]
Length = 1212
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 268/1003 (26%), Positives = 443/1003 (44%), Gaps = 125/1003 (12%)
Query: 22 ASSSASSPRP---PQQTPPPKIAATVSFSPAKRKVVSSLF-----PPKTPKKPKLSPHTL 73
A SS + +P P+ P K +FS + L +T P P TL
Sbjct: 246 AGSSYKATQPATKPKSITPVKTTPKKNFSKENEERYQWLVDVRDAEKRTTDDPNYDPRTL 305
Query: 74 NPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV--LG 131
+ P S + K+T E+Q E+K+K + ++ + G + + DA +A L
Sbjct: 306 H---VPQSAWS---KFTAFEKQYWEIKSKMYNTVVFFKKGKFYELYENDATIANTEFDLK 359
Query: 132 IYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTET---AAIKAHGPGKAGPFGR 188
I N A IP + ++ G+KV V Q E+ ++ G + R
Sbjct: 360 IAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVDQVESLLAKEMRGGGTKEEKIIKR 419
Query: 189 GLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVG--KIRNGVFGDGFDVRLG 246
L+ + T TL + ++ DD V ++ + DG + G
Sbjct: 420 ELTGVLTGGTLTDMD------------------MISDDMAVYCLSVKEEILDDGSKI-FG 460
Query: 247 VVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN 306
VV V+ +T +V + EF D + LE ++ + P E+L + +L +
Sbjct: 461 VVFVDTATSEVNFIEFPDDAECTKLETLITQIKPKEILCMKGNLCSIAVKILKFNAQGHQ 520
Query: 307 VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
+ + ++E Y+ E+ +S D+ + N+ + +
Sbjct: 521 IWNQL---------NPISEFWD-YDTTCENLVSAKYYDAEDLDDYSNYPPTLIDYKDNHK 570
Query: 367 LAVQALALTIRHLKQFGLER-IMCLG--ASFR-SLSGSMEMTLSANTLQQLEVLRNNSNG 422
+A A + +L+ L+ IM LG + ++ S + S M L TL LE+L N+ +G
Sbjct: 571 VAFGAFGGLLFYLRSLKLDSSIMTLGHISEYQISKNSSTHMLLDGITLNNLEILSNSFDG 630
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
+ GTL ++N T +G R ++ V HPL N I+ R DA+ + R+
Sbjct: 631 GDKGTLFKLINKASTPFGKRAMKSLVLHPLMKINEINERYDAIEYLMNEGLELRSK---- 686
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
L LTSL PD++R + RI +T +F+ V+++
Sbjct: 687 -------------------LEQTLTSL---PDLERLLARIHSKTLKFKDFLKVVESFEGI 724
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK-AAKLLSTVNKEAADQGD 601
K L LH E + ++ AL K L S P + + ++ ++E A +
Sbjct: 725 SKSLGPLH------EFIPEES--GALFKHL---KSFPRELPELVSQWDDAFDREEAKK-- 771
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
++++ + G +E ++ ++ +++L+ + ++ + + +LIELP
Sbjct: 772 --DVVVPTEGVDAEFDDSQCKMKILEDKLEQYLKEYKRTYKSHEVVYRDSGKEIYLIELP 829
Query: 662 ANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
+VP +W ++ ST K RY SPEV +L E +VC + + F +
Sbjct: 830 NKLVKQVPNDWQQMGSTSKVKRYWSPEVKRTARELMEQRELHKMVCESLKSRMYERFDAH 889
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y + AV +L +DC+ AL S + RP FVD E QI RHP +
Sbjct: 890 YKTWLKAVHSLGKIDCILALTRTSETIGYPSCRPEFVDS-EKGQIEFRELRHPCF--LAS 946
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
+F+PND L ++TG N GKS +R AL I+AQ+G FVPASSA+L +D
Sbjct: 947 SDFIPNDVILGGSEANFGLLTGANAAGKSTLMRTTALAVILAQIGCFVPASSAKLSTVDK 1006
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I TR+GA+D+I QG+STF EL+E I+ N T +SLVI+DELGRG S+ DG AIA +TL
Sbjct: 1007 IMTRLGANDNIMQGKSTFFVELSETKKIISNATTRSLVILDELGRGGSSSDGFAIAESTL 1066
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPM------DSKSDQ 951
+L H + + F HY GT +S+ +H + P+ D+ S +
Sbjct: 1067 HHLATHIQPLGFFAIHY--------------GTLGLSF-QNHPQIKPLRMAIIIDNNS-R 1110
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++T+LYK+ G + SFG VA + + + + A V A + E
Sbjct: 1111 NITFLYKLEEGTAPGSFGMNVASMCGIANTIVDSAEVAAKEYE 1153
>gi|423082694|ref|ZP_17071283.1| DNA mismatch repair protein MutS [Clostridium difficile
002-P50-2011]
gi|423087012|ref|ZP_17075402.1| DNA mismatch repair protein MutS [Clostridium difficile
050-P50-2011]
gi|357545261|gb|EHJ27236.1| DNA mismatch repair protein MutS [Clostridium difficile
050-P50-2011]
gi|357547812|gb|EHJ29687.1| DNA mismatch repair protein MutS [Clostridium difficile
002-P50-2011]
Length = 947
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 256/931 (27%), Positives = 448/931 (48%), Gaps = 158/931 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q +E+K +Y D +L +G + F EDA +A+K L G L+
Sbjct: 7 KLTPMMKQYLEVKNRYKDCILFFRLGDFYEMFFEDALVASKALEIALTGKACGLEERAPM 66
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P N ++ +LV G+KV + +Q E P A G R + + T T
Sbjct: 67 CGVPFHSANSYISKLVENGYKVAIGEQME-------DPSTAKGIVRREVIRVITPGT--- 116
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V G ++NYL+ + D N+ G+ V+ISTG+
Sbjct: 117 ---VLDGNLLENKKNNYLLSLYKDGTNI----------------GLTYVDISTGETNATC 157
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N+ + +E + + P E+++ EK L SN+ + + D ++
Sbjct: 158 LNEDKV---IEEIA-KIHPTEIIINDL--DFIEK--LRDIATVSNIYINESFSDNYLDIN 209
Query: 322 ALAEVM-SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
L E +Y Q + ++G +S++ ++N + + I ++
Sbjct: 210 ILKEYFPDVYL------------QKLKFDDKGLIKSSLSILLNYIYNTQKQITSNINNIN 257
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ M L R+ ++E+T + +R N G+LLH+++ T T G
Sbjct: 258 IYNSSEYMVLDMFTRT---NLELT---------QTIRGNKKK---GSLLHVLDKTSTAMG 302
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLR++V PL +++ I RLD + EI + +
Sbjct: 303 GRLLRKYVEEPLINKSKIENRLDVIEEIKDD----------------------------F 334
Query: 501 ILSSVLTSLGRSP-DIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
IL L + ++ DI+R +I TP E I + +I ++L L K
Sbjct: 335 ILREDLNDILKNIYDIERICGKIAFERVTPKELIHLKNSI----EKLPNL--------KD 382
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFSEVA 617
T ++ +LK+ + + + K + + +++ ++ + + II + E+
Sbjct: 383 TINLSNAKILKKYV------SEMDKLDDIYNLIDEAILEEPTITIKDGNIIKSDFSDELK 436
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFKVPLNWAKVN 674
R+ ++ + + N R++ G+++L+ F V G + IE+ ANFK AK++
Sbjct: 437 ELREISKNGAFLVKEIENREREKTGVKSLKIGFNKVFG--YYIEITKANFK----QAKLD 490
Query: 675 ST---KKTI----RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA---EFQ 724
T K+T+ RY +PE+ +++ A E++ ++ F++ Y Q
Sbjct: 491 ETYIRKQTLSNAERYITPELKEIEEKILHAEEKIK---SLEYEIFVEIRDTIYKNIDRIQ 547
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPN 783
+ +A +D +LAT++ N+V+P +E ++ I +GRHPV++ I+ +NFVPN
Sbjct: 548 KVAKIIANIDVFVSLATVAHINNYVKPAI---NENNKLDIRNGRHPVVENIVGEENFVPN 604
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT L+ IITGPNM GKS Y+RQ A+I +MA +GSFVPA SA++ +LD I+TR+G
Sbjct: 605 DTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAESADIPILDRIFTRVG 664
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASD + QG+STF+ E+NE S IL+N T +SLVI+DE+GRGTST+DG+++A++ ++Y+ ++
Sbjct: 665 ASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTSTYDGISLAWSIVEYIQKN 724
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
+C LF THY ++ D++ +F V Y ++ + + + +L K++P
Sbjct: 725 IRCKTLFATHYHELTDLEEEFK-EVKNYSIAV-----------KEDGEGIIFLRKIIPQG 772
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ S+G VA+LA+LP I RA I LE
Sbjct: 773 ADKSYGIYVAKLAKLPDEVIERAKYILKDLE 803
>gi|393243806|gb|EJD51320.1| DNA mismatch repair protein Msh6 [Auricularia delicata TFB-10046 SS5]
Length = 1110
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 277/966 (28%), Positives = 426/966 (44%), Gaps = 120/966 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P P T I P S K +TP E+Q E+K D +L + G F +
Sbjct: 196 RAPSDPDYDPRT---IYIPKSAW---KSFTPFERQFWEIKQNQYDTVLFFQKGKFFELYE 249
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA------- 173
DA + + + +P + + + G KVG V Q ETA
Sbjct: 250 NDARIGHQEFDLKLTERVKMCMVGVPEQSFDFWAVKFLMRGHKVGKVMQDETALGAEMRL 309
Query: 174 AIKAHGPGKAGPFGRG-LSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKI 232
A A K R L+ ++T TL D E+ + V VV+
Sbjct: 310 AKTAGAKSKEDKIVRRVLNQVFTLGTLV---------DPLDEEAGHCVSVVES------- 353
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELL-LGQPLSK 291
GDG R GV ++ ST + F D R+ LE VL E+L + L+
Sbjct: 354 -----GDG---RFGVCVLDCSTSEFNMASFEDDPCRTKLETVLRRTRVKEMLGIKGNLTS 405
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQ 351
+T + LL P + + S D L + LY ED + ED+ VP+
Sbjct: 406 ETTR-LLKTVLPGNCLWTWQRSADVLSYEQTLQALKELYPQ-PEDAM--EEDEYAGVPQ- 460
Query: 352 GNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLS---GSMEMTLSAN 408
+I +++ ++AL TI +L+Q L++ + +F L + + L
Sbjct: 461 -----SIRTMLH-ERAPIEALGATIAYLRQLNLDKNILSMRNFNVLDPMRKGVGLLLDGQ 514
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL LEVL +NS+G+ G+LL ++ +T +G RL R W+ PL + I+ RLDAV ++
Sbjct: 515 TLAHLEVL-SNSDGTAEGSLLDLLGRCVTPFGKRLFRMWLCAPLREAATINDRLDAVEDL 573
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
+ S QF + V PD++R +TRI
Sbjct: 574 MDHPSSAE--------------------QFAKLAKGV-------PDLERLLTRIHAGKCK 606
Query: 529 PSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL 588
+F+ V+ L K L D E K+ + +L L L S P + +
Sbjct: 607 VKDFLKVLLTFLQTFKGLNDKLADLENAAKLKAPSL-------LRLFKSVPDLTPHVTAI 659
Query: 589 LSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEF 648
A D LL ++G+ + + ++ + L+ ++ +G + +
Sbjct: 660 EEMY---ALDDDSLLP----ASGKDETYDQVIEEIEDIEGNLERKLDKFADVVGTKLTYW 712
Query: 649 MSVSGIT--HLIELPA--NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIV 704
S G +++++PA KVP +W + NSTK RY P++ + +L A E T
Sbjct: 713 HSAQGQKEIYIVQVPAAKTKKVPSDWVQTNSTKAMKRYDVPDLAPLIRKLKEARENRT-- 770
Query: 705 CRAAWDSFL-KEFGGYYAE---FQAAVQALAALDCLHALATLSRNKNFV-RPVFVDDHEP 759
AA +SF + F + A+ + AV+ LA LDCL +LA S RP V+ +
Sbjct: 771 --AAINSFKSRVFAAFDADRGIWLRAVRMLAELDCLFSLAKASEAIGATCRPEIVE-SDV 827
Query: 760 VQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMA 819
+ + +HP L + D F+PND L + ++TGPNMGGKS +R A IMA
Sbjct: 828 ASVEFKNLKHPAL-CLKRDEFIPNDVALGGSKPRVMLLTGPNMGGKSTLMRMTAAGVIMA 886
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q+G +PA SA + +D I TRMGA D++ STF EL+E IL+ + +SLVI+DE
Sbjct: 887 QLGMLLPADSARISPVDAIMTRMGAYDNMFSNSSTFKVELDECCKILKEASPKSLVILDE 946
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
LGRGTST+DG+AIA A L + H + F THY + D YH H
Sbjct: 947 LGRGTSTYDGMAIAGAVLHEIATHTLALSCFATHYSSLTDDY--------AYHPQIRNMH 998
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
D + +++ +LYK+V GV+ SFG VA LA +P + RA VI+ A+
Sbjct: 999 MATRVDDER--RELVFLYKLVDGVATGSFGTHVASLAGVPSDVVERAEVISIDFAAKFKK 1056
Query: 1000 RVQNRS 1005
+++ +S
Sbjct: 1057 KIEGKS 1062
>gi|198435135|ref|XP_002126574.1| PREDICTED: similar to MGC85188 protein [Ciona intestinalis]
Length = 1307
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 268/969 (27%), Positives = 439/969 (45%), Gaps = 113/969 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP Q +LK+ +V+L +VG + + DA + K LG+ ++ NF + P
Sbjct: 358 KLTPAMHQWWKLKSTNFNVVLFFKVGKFYELYHMDAVVGVKELGL-TYMKGNFAHSGFPE 416
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAA-----IKAHG-PGKAGPFGRGLSALYTKATLEA 201
+ LV G+ V V+QTET I+ P R + + TK T
Sbjct: 417 VAFGRYADTLVQKGYTVARVEQTETPEQNQQRIRGKSLPKHEKTLRREICRVTTKGTQVH 476
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
GG + ES++L+ + + N + V + GV V+ + G G+
Sbjct: 477 NMWQGGSK---HHESDFLLSISERVVNRNESSGSVCRE-----FGVCFVDTTVGVFHLGQ 528
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
F D S L +L SP+++L + LS + K+L G +S + ++ + G
Sbjct: 529 FTDDRHCSRLCTMLAHHSPSQVLFERGKLSNELNKIL--RTGLSSIL------QNPLVPG 580
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP----DLAVQALALTI 376
+ + + + E+ N+ P S + + P +LA+ AL +
Sbjct: 581 SQFWDAPKTLKTLLNEKYFVKENDNVWPPTLKCMLSDTDALGLSPKLGYELALSALGACV 640
Query: 377 RHLK------------QFGL-----ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNN 419
+LK QF + E+ + +G+ +M L + TL LE++ N
Sbjct: 641 YYLKKCLIDYEILSMRQFHIYNATVEKTADVKVKDNFATGNEKMILDSVTLSNLEIIY-N 699
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
S G GTLL +++ T +G RLL++W+ P C+ ++I+ RLDAV +I
Sbjct: 700 SKGEREGTLLERLDNCRTPFGKRLLKQWLCLPPCNPDVINDRLDAVDDIMS--------- 750
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIF------HRTATPSEFI 533
N+D +LS + +S+ + PD++R ++ I + P
Sbjct: 751 --------NND----------LLSPLFSSMRKMPDLERMLSNIHSLSKGARKEDHPENRA 792
Query: 534 AVMQAILYAGKQLQQ-LHIDGEYREKVTS--------KTLHSALLKRLILTASSPAVIGK 584
+ Y+ K+++ + + Y S + S+LLK +L +S GK
Sbjct: 793 IFYEETKYSKKKIEDFISVLDNYEAAFVSIKKMQGSVASFKSSLLKS-VLGLTSGISEGK 851
Query: 585 AAKLLSTVN--KEAADQGDLLNLMIIS--NGQFSEVARARKAVQSAKEELDSLINMCRKQ 640
L ST+ K A +Q I+ G E A + + ++L+ +N +K+
Sbjct: 852 FPDLGSTLKQWKNAFNQKKAKETGKITPNAGTNPEYDGAMEDINRINDDLERYLNEQKKK 911
Query: 641 LGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
L + + + +ELPA+ K+P ++ K + +P+V L ++ A
Sbjct: 912 LSCSRIIYKGTGNKRYQLELPADVASRKLPNDYVISGQRKGFKSFRTPKVDCLLKEMEDA 971
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFV- 754
+EF + + AV LA LD L + A S+ RP+ +
Sbjct: 972 ETRRDTAQADTMSIVFREFDKDFEMWNTAVSCLALLDVLSSFAEYSKGDKDEMSRPIILP 1031
Query: 755 --DDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAERE-----YCQIITGPNMGGKS 806
H+P+ + I S RHP + I+ D+F+PNDT L E C ++TGPNMGGKS
Sbjct: 1032 PSSQHQPL-LEIRSARHPCITKIIFSDDFIPNDTILGCGDEGEDHPMCLLLTGPNMGGKS 1090
Query: 807 CYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYIL 866
+RQV L+ I+AQ+G +VPA S + D I+TR+GASD I G STF EL+E IL
Sbjct: 1091 TLMRQVGLVVILAQLGCYVPAESCRMTPCDRIFTRLGASDRIMTGESTFYVELSETYSIL 1150
Query: 867 RNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTG 926
++ T SLV++DELGRGT+T+DG +IAYA LD + H C +F THY + + +
Sbjct: 1151 KHATKNSLVLLDELGRGTATYDGTSIAYAVLDNIANHVGCRTIFSTHYHTLVE-DLAHSK 1209
Query: 927 SVGTYHVSYLTSH-KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISR 985
V H+S + H V G +D ++ +T+LYK+ G S+GF A LA +P S ++
Sbjct: 1210 HVKLGHMSCMVEHDDVDGDVDKET---LTFLYKLADGACPKSYGFHAALLADIPESVVTI 1266
Query: 986 ATVIAAKLE 994
A A ++E
Sbjct: 1267 ARRKAKEME 1275
>gi|319953643|ref|YP_004164910.1| DNA mismatch repair protein muts [Cellulophaga algicola DSM 14237]
gi|319422303|gb|ADV49412.1| DNA mismatch repair protein MutS [Cellulophaga algicola DSM 14237]
Length = 870
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 266/952 (27%), Positives = 441/952 (46%), Gaps = 146/952 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN---- 139
T KK TPL Q +K KYPD LL+ VG + FG+DA A+++LGI +N
Sbjct: 4 TEKKKVTPLMNQYNTIKKKYPDALLLFRVGDFYETFGDDAIRASQILGITLTHRNNGGEK 63
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKAT 198
A P +N ++ +LV AG +V + Q E P + RG++ L T
Sbjct: 64 TELAGFPHHSVNTYLPKLVKAGLRVAICDQLE-------DPKQTKTIVKRGVTELVTPG- 115
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
V +D +SN + V + G R G+ GV ++ISTG+ +
Sbjct: 116 ------VAFNDDILSAKSNNFLAAV----HFG--RKGI---------GVAFLDISTGEFL 154
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
E D ++ +L + +P E+L+ + K+ ++ G +
Sbjct: 155 TSEGTD----DQVDKLLQNFAPNEILVSKSHKKEFQETF----GKQFHT----------- 195
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIR 377
E ++ +TL+N+ +++G ++ L + A +T+
Sbjct: 196 ---FFMEDWVFQDDYALETLTNHFKT-----------KSLKGFGVDHLSLGITAAGVTLH 241
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGTLLHIMNHTL 436
+L + ++ + + ++ + + T++ LE+ NNSN TLL I++ T+
Sbjct: 242 YLTETQHRKLQHI-SKLERIAEEEHIWMDRFTIRNLELYHANNSNAI---TLLDIIDKTI 297
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
+ G R+L+RW+ PL + I R + VS + + EP
Sbjct: 298 SPMGGRMLKRWLALPLKNVEKIKRRHEVVSYLKAN-----------------------EP 334
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
+ + + +G D++R I+++ P E I + + L A ++QL I +
Sbjct: 335 T-HAKFQNHIKQIG---DLERLISKVATGKINPKEVIQLKNS-LEAIVPIKQLCIQSKNE 389
Query: 557 E-KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
K LH+ L R +K+ +++EA ++L I+ G E
Sbjct: 390 AVKFIGDQLHACDLLR--------------SKIKEMIHEEAP--VNMLKGSTIAKGYSEE 433
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKV 673
+ R S K+ L+ ++ ++ G+ +L+ S + + IE+ K VP W +
Sbjct: 434 LDELRGLAFSGKDYLNKMLARETERTGISSLKIASNNVFGYYIEVRNTHKDKVPEEWIRK 493
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY + E+ ++ A E + + + + + Y A Q +A L
Sbjct: 494 QTLVNAERYITEELKEYEGKILGAEERILSLEQELFSQLIMWMQEYIAPVQNNAYQIAQL 553
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAER 791
DCL L++ N+V P D E I I +GRHPV++ L + ++ ND L+ E
Sbjct: 554 DCLCGFTQLAKENNYVLPSINDTTE---IEIKNGRHPVIEKQLPLGEIYIANDVVLNREE 610
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
+ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA SA++ +D I+TR+GASD+I G
Sbjct: 611 QQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAESAKIGFVDKIFTRVGASDNISMG 670
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLF 910
STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL EH + LF
Sbjct: 671 ESTFMVEMNETASILNNLSERSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPARAKTLF 730
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY +I ++ T F + Y+VS + +V +L K+ PG SE SFG
Sbjct: 731 ATHYHEINEMATTFE-RIKNYNVSV-----------KELKDNVLFLRKLTPGGSEHSFGI 778
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQ 1022
VA++A +P I++A I KLE SS +L KL D +E Q
Sbjct: 779 HVAKMAGMPQQVIAKANKILKKLEKSHSS--------EELTGKLKDAHEEMQ 822
>gi|291550404|emb|CBL26666.1| DNA mismatch repair protein MutS [Ruminococcus torques L2-14]
Length = 888
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 272/967 (28%), Positives = 441/967 (45%), Gaps = 197/967 (20%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ + E K +Y D +L +G + F +DA A++ L G LD
Sbjct: 8 KLTPMMKIYCETKEQYKDCILFYRLGDFYEMFFDDALTASRELEITLTGKSCGLDERAPM 67
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKAT--- 198
IP + ++ RLV G+KV + +Q E P A G R + + T T
Sbjct: 68 CGIPYHAVEGYLNRLVAKGYKVAICEQVE-------DPKTAKGIVKREVVRIVTPGTNLD 120
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+A ++ ++NY++C+V D R GV +ISTGD
Sbjct: 121 TQALDET---------KNNYIMCIV------------YIAD----RYGVAIADISTGDYF 155
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLL-------GQPLSKQTEKM--------------- 296
E D S L + SP+E++ G L +K+
Sbjct: 156 VTELPDS---SRLMDEIYKFSPSEIICNEAFYMSGMDLDAMRDKLGITIYSLDSWYFDDA 212
Query: 297 -----LLAYAGPASNVRVECASRDC-FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE 350
LL + + + A DC I GAL ++ L+E +++LSN
Sbjct: 213 VCKDKLLEHFKVKNFAGLGLADYDCGIISAGAL--LIYLFETQ-KNSLSN---------- 259
Query: 351 QGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTL 410
+ H+ + + M + +S R L
Sbjct: 260 -------------------------LTHITPYITGKYMLIDSSTR------------RNL 282
Query: 411 QQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE 470
+ E LR + G+LL +++ T T G+R LR+ V PL D++ I+ RLDAV E+
Sbjct: 283 ELCETLREK---QKRGSLLWVLDKTRTAMGARTLRKNVEQPLIDKSEINRRLDAVEEL-- 337
Query: 471 SMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPS 530
KN + E + Y LS V D++R IT+I + +A P
Sbjct: 338 ----------------KNQAIAREEIREY--LSPVY-------DLERLITKITYGSANPR 372
Query: 531 EFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLS 590
+ A ++ + L + + + L + LLK + + +L++
Sbjct: 373 DLTAFKGSL----EMLPPI--------RYILQDLQAPLLKEIY---EDLDALEDLCELVT 417
Query: 591 TVNKE----AADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
+E A +G+ II +G EV + R+A K+ L L N R++ G++NL
Sbjct: 418 KAIREDPPLAMKEGN-----IIRDGYNEEVDKLRRAKSDGKDWLAKLENDEREKTGIKNL 472
Query: 647 EFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIV 704
+ + +E+ ++K VP + + + RY +PE+ D + A ++L +
Sbjct: 473 KIKYNKVFGYYLEVTNSYKDLVPDYYTRKQTLANAERYITPELKELEDMILGAEDKLYAL 532
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHI 764
+ + G Q +A+AALD +LA ++ N+VRP +E + I
Sbjct: 533 EYELYSEVRETIAGQVERIQQTAKAVAALDAFSSLALVAERNNYVRPKI---NEKGILDI 589
Query: 765 CSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
GRHPV++ ++ D F+ NDT L ++ IITGPNM GKS Y+RQ ALI +MAQ+GS
Sbjct: 590 KEGRHPVVERMIPNDMFIANDTYLDDKKHRISIITGPNMAGKSTYMRQTALIALMAQIGS 649
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
FVPA SA + + D I+TR+GASD + G+STF+ E+ E + ILRN T++SL+I+DE+GRG
Sbjct: 650 FVPAESANICLSDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRG 709
Query: 884 TSTHDGVAIAYATLDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV 941
TST DG++IA+A ++Y+ + K LF THY ++ +++ K +V Y ++
Sbjct: 710 TSTFDGLSIAWAVVEYISDSKLLGAKTLFATHYHELTELEGKI-DNVNNYCIA------- 761
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE-VSSR 1000
+ K D D+ +L K+V G ++ S+G +VA+LA +P ISRA I +L E +++R
Sbjct: 762 ---VKEKGD-DIVFLRKIVKGGADKSYGIQVAKLAGVPDLVISRAKEIVEELSDEDITNR 817
Query: 1001 VQNRSAK 1007
V +AK
Sbjct: 818 VSEIAAK 824
>gi|212543423|ref|XP_002151866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
gi|210066773|gb|EEA20866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
Length = 1197
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 254/953 (26%), Positives = 426/953 (44%), Gaps = 116/953 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P + P S K++P E+Q E+K K+ D ++ + G + + D
Sbjct: 287 PGHPDYDPRNIYIPPLAWS------KFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEND 340
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA----- 177
A + ++ + N +P L+ + V G+K+ V Q+E+A K
Sbjct: 341 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGYKIARVDQSESALGKEMRERD 400
Query: 178 HGPGKAGP----FGRGLSALYTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGK 231
K G R L+ + T TL V G +D S Y V + +
Sbjct: 401 DKKAKVGKEDKIIKRELACVLTAGTL-----VEGSMLQDDM---STYCVAIKE------- 445
Query: 232 IRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLS 290
+ DG G+ V+ +TG EF D + E + P ELLL + +S
Sbjct: 446 ----IILDGLPA-FGIAFVDTATGQFYLSEFKDDADMTKFETFVAQTRPQELLLEKSAVS 500
Query: 291 KQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE 350
++ ++L GP + ++ + A+ E+ + D + + N++
Sbjct: 501 QKAMRILKNNTGPTTLWNHLKPGKEFWEADIAVRELDA------SDYFVSPDSDNINAWP 554
Query: 351 QGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSA 407
Q R A E + A+ A +++L+ L+R ++ +G + + + + L
Sbjct: 555 QV-LREAREK-----ENAMSAFGALVQYLRVLKLDRDLISIGNFTWYDPIRKATSLVLDG 608
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
TL LE+ N+ +G GTL ++N +T +G R+ ++WV HPL D + I+AR DAV
Sbjct: 609 QTLINLEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDIDKINARFDAV-- 666
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
D N+D TI + QF SS LT + PD++R I+RI
Sbjct: 667 -----------------DALNADSTIRD-QF----SSQLTKM---PDLERLISRIHAGAC 701
Query: 528 TPSEFIAVMQA---ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
+F+ V++ I Y L+ L GE L+ +L+ +S P ++
Sbjct: 702 KGQDFLRVLEGFEQIEYTMGLLKDLG-SGE------------GLIGKLV--SSMPDLVSP 746
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
+ ++ A + +L + G + ++ ++ +L++L+ R+ LG
Sbjct: 747 LEYWKTAFDRLKAKENGIL---VPEQGIEEDFDASQATIEQIHRDLENLLKQARRDLGST 803
Query: 645 NLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+ + + +E+P K +P W ++++TK+ RY+ PE+ + +L A E +
Sbjct: 804 AICYRDNGKEIYQLEVPIKVKNIPKTWDQMSATKQVKRYYFPELRALIRKLQEAQETHSQ 863
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQ 761
+ + F F Y + +++ +A LDCL +LA S + + RP FVD V
Sbjct: 864 IVKEVAGRFYARFDEDYETWLKSIRIVAQLDCLISLAKASSSLGQPSCRPEFVDSERSV- 922
Query: 762 IHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQV 821
+ RHP + + D F+PND L ++ ++TG N GKS +R + IMAQV
Sbjct: 923 LEFEELRHPCMLQNVTD-FIPNDVQLGGDKASINLLTGANAAGKSTILRMTCVAVIMAQV 981
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
G ++P SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELG
Sbjct: 982 GCYIPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPKSLVILDELG 1041
Query: 882 RGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV 941
RGTS++DGVA+A A L ++ H + F THY +A + S K
Sbjct: 1042 RGTSSYDGVAVAQAVLHHIATHVGSLGFFATHYHSLA----------AEFENHPEISPKR 1091
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
M ++ VT+LYK+ GV+E SFG A + +P I A A + E
Sbjct: 1092 MRIHVDDEERRVTFLYKLEDGVAEGSFGMHCASMCGIPNKVIENAENAAKQWE 1144
>gi|399890152|ref|ZP_10776029.1| DNA mismatch repair protein MutS [Clostridium arbusti SL206]
Length = 878
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 257/938 (27%), Positives = 433/938 (46%), Gaps = 161/938 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ QQ + +K K D +L +G + F EDA++A++ L G L
Sbjct: 4 TPMMQQYISVKEKCKDCILFFRLGDFYEMFFEDAKIASRELELVLTGKDCGLSERAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP N+++ +L++ G+KV + +Q E A G RG+ + T T D
Sbjct: 64 IPFHSANMYITKLISKGYKVAIGEQLEDPA------SAKGIVKRGIVKIVTPGTYT---D 114
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
ED ++NY++ + D G IS DV GEF+
Sbjct: 115 SSFLEDT---KNNYIMSIFVDKDKFG---------------------ISIADVSTGEFDC 150
Query: 265 GFLRSGLEAVLLSLS---PAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
R E ++ +S P E+L+ L + L+++ R C+
Sbjct: 151 TSWRLEQELIINEISKYSPKEILIQDSLDES----LISHIKE----RFNCS--------- 193
Query: 322 ALAEVMSLYEN--MGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
+ +E+ +D N + Q ++ E+ DL V + +R+L
Sbjct: 194 -----FTKFEDEFFNKDAYGNLKHQFLNFREK-----------KYDDLIVGSANGLLRYL 237
Query: 380 ---KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
++ L I + S M++ N+ + LE+ S+ G+LL +++ T
Sbjct: 238 MDTQKVSLAHI----DNLNHYSVVDYMSIDVNSRRNLELTETLREKSKKGSLLWVLDKTS 293
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G R LRRW+ PL D+ I RLD+V E E++ + D KN+
Sbjct: 294 TAMGGRQLRRWIEQPLIDKISIEERLDSVQEFTENISVH--------EDLKNA------- 338
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
L + DI+R + +I + E I + +I ++L ++
Sbjct: 339 ------------LKQIYDIERLVGKISTLSVNAKELIFLKNSI----EKLPKV------- 375
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA----ADQGDLLNLMIISNGQ 612
K K S LLK++ I +L T ++ +G+ II +G
Sbjct: 376 -KEVLKNCKSDLLKKVYTNLDDLKDI---YNILDTAISDSPSVSVKEGN-----IIKDGY 426
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLN--- 669
+ V R+A KE + L + R++ +++L+ + IE+ K LN
Sbjct: 427 NNNVDELRQAKSHGKEWIAKLESSEREETSIKSLKVGYNKVFGYYIEIT---KSNLNMVP 483
Query: 670 ---WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
+ + + RY + E+ +++ A E+L + + S E + + +
Sbjct: 484 EGKYIRKQTLANCERYITEELKEMEEKILGAEEKLINIEYELFASIRDEISKHIDRMKKS 543
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDT 785
+ L+ LDCL + A+++ N+ +P VD + + IH GRHPV++ ++ + FV NDT
Sbjct: 544 AKLLSELDCLCSFASVALEHNYCKPNVVDSGD-IDIH--EGRHPVVENMISVGTFVANDT 600
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
++ E +ITGPNM GKS Y+RQVALI IMAQ+GSFVPA A + + D I+TR+GAS
Sbjct: 601 KINTTDEQLMLITGPNMAGKSTYMRQVALIVIMAQIGSFVPAQDAIISICDKIFTRIGAS 660
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK- 904
D + G+STF+ E+ E S IL+N T++SL+I+DE+GRGTST+DG++IA++ ++Y+ +K
Sbjct: 661 DDLAAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTSTYDGLSIAWSVVEYICTNKD 720
Query: 905 -KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
KC LF THY ++ ++ G + Y ++ + + D+ +L K+VPG
Sbjct: 721 IKCKTLFATHYHELTSLEGVING-LKNYSIAV-----------KQIEDDIVFLRKIVPGG 768
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
++ S+G +VA+LA LP SRA I LE E ++ +
Sbjct: 769 ADQSYGIEVAKLAGLPEKVTSRAKEILEDLEKENNNEI 806
>gi|294496664|ref|YP_003543157.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
gi|292667663|gb|ADE37512.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
Length = 881
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 260/937 (27%), Positives = 420/937 (44%), Gaps = 130/937 (13%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------AHLDHNFM 141
K TP QQ K ++PD L+ +G + FGEDA+ A+ L I
Sbjct: 3 KITPAMQQYYAAKEQHPDSLIFFRMGDFYESFGEDAKTIAQELDITLTTRGKGKDGEKMP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A IP ++ ++ RLV G+KV V +Q E P +
Sbjct: 63 LAGIPYHAVDNYLPRLVRKGYKVAVCEQLED------------PKNAKGVVKRGVVRVVT 110
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V +NYL+ + G D GV +++STG+ + +
Sbjct: 111 PGTVIDSSMLSDPSNNYLMAIA----------------GRDKDFGVAFLDVSTGEFLTTQ 154
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
ND G+ + + PAE ++ L + E S + AS D
Sbjct: 155 INDQPPFDGIAGEVARMRPAECIVLPQLMENEELQSRLAELKLSTTEFDAASTDP----- 209
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ-ALALTIRHLK 380
A A+ L E++G TL +G + + A++ AL +R L
Sbjct: 210 AYAD-RHLCEHLGVSTL------------EGMGCAGLPFAKMAASCALEYALETQMRELN 256
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ S S M L + TL+ LEV++N T+L +++ T T G
Sbjct: 257 HVQF---------LHTYSSSEFMILDSITLRNLEVVKNVRGEGRDTTILQVLDETKTPMG 307
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLL++W+ PL + + I+ RLDAV E+ SD T++ +F
Sbjct: 308 SRLLQKWILKPLLNVSHINKRLDAVEEL--------------------SDNTLL--RF-- 343
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
V + L D++R + R+ + + + +A+ +++ L+ L +GE
Sbjct: 344 ---DVRSHLSYVKDVERLVGRVVYGNSNARDLVALKKSLQAIPSLLETL--EGE------ 392
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEV 616
H A+L R++ I L+ E + +G L I G E+
Sbjct: 393 ----HKAMLARIVQGMKDFREIDTLTDLIERAIVEEPPLSVREGGL-----IKPGYSEEL 443
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL--PANFKVPLNWAKVN 674
++ +AK + S R + G+++L+ I + +E+ P +VP ++ +
Sbjct: 444 DELKEISSNAKSWIASFQQKERDRTGIKSLKVGYNKVIGYYLEVTKPNISQVPDDYIRKQ 503
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ R+++P++ ++ A+E+ + ++ + + + Q L LD
Sbjct: 504 TMTNAERFYTPQLKDWEGKILSADEKRVALEYELFNEVISVVANHSKQLQEMAVLLGELD 563
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L +LA ++ N N+VRP DD +I I GRHPV++ + F+PND + E
Sbjct: 564 VLASLAEVAVNNNYVRPSITDD---CRILIRQGRHPVVENSVDGGFIPNDVEMDCSDEQF 620
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNM GKS Y+RQVALI IMAQ GSFVPAS A + ++D I+TR+GA D + G+ST
Sbjct: 621 LLITGPNMAGKSTYMRQVALIVIMAQAGSFVPASHASVGIVDRIFTRVGAFDDLASGQST 680
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV--LFVT 912
F+ E+ E + IL N TA+SLV++DE+GRGTST+DG +IA A ++Y+ + V LF T
Sbjct: 681 FMVEMVELANILNNSTAKSLVLLDEIGRGTSTYDGYSIAKAVVEYIHNKGRQGVRSLFAT 740
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ +I V YH++ + D+ +L K+VPG ++ S+G V
Sbjct: 741 HYHQLTEIAESLK-RVKNYHIAV-----------KEDGDDLVFLRKIVPGATDKSYGIHV 788
Query: 973 AQLAQLPPSCISRATVIAAKLEAE-VSSRVQNRSAKR 1008
A+LA +P RA I +E+E V SR S KR
Sbjct: 789 ARLAGVPHKVTKRAQSILEDIESESVISRESEGSRKR 825
>gi|325103878|ref|YP_004273532.1| DNA mismatch repair protein MutS [Pedobacter saltans DSM 12145]
gi|324972726|gb|ADY51710.1| DNA mismatch repair protein MutS [Pedobacter saltans DSM 12145]
Length = 870
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 254/931 (27%), Positives = 433/931 (46%), Gaps = 154/931 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMT 142
K TPL Q ++K KYP LL+ VG + FGEDA A+++LGI N
Sbjct: 7 KETPLMTQYNQIKAKYPGALLLFRVGDFYETFGEDAVKASQILGIVLTKRANGSASHIEL 66
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A P + ++ +LV AG +V + Q E ++K G RG++ L T
Sbjct: 67 AGFPHHSIETYLPKLVRAGQRVAICDQLEDPKSVK-------GIVKRGVTELVTPG---- 115
Query: 202 AEDVGGGEDGCGGESN-YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
V ++ +SN YL + D G +G V ++ISTG+ +
Sbjct: 116 ---VAYNDNIVQQKSNNYLATLHFDKGTIG----------------VAFLDISTGEFLTA 156
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ N ++ + +L S P+E++ + SK+ ++ GG
Sbjct: 157 QGNAEYI----DKLLQSFKPSEVIFAKSKSKEFTELF---------------------GG 191
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHL 379
++ + D N ++ +V ++++G + +L + A + + +L
Sbjct: 192 RFYTFILDDWA-FTNDYAQENLLKHFEV-------NSLKGFGIEKLNLGIIAAGVALHYL 243
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ ++ + + + M L T++ LE++ S+ + TL+ +++HT +
Sbjct: 244 NETEHRQLQHI-TNISRIEEDRYMWLDRFTVRNLELV--GSSNEDAKTLIDVLDHTSSAM 300
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G+R+LR+WV PL +R I RLD VS E++ QH
Sbjct: 301 GARMLRKWVLMPLKNRKPIEERLDVVSFF---FKHNELRETLEQH--------------- 342
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--HIDGEYRE 557
+ +G D++R +++I + A P E + + +A L A +++++L ++D E +
Sbjct: 343 ------IRQIG---DLERLVSKIGLQKANPREIVQLKRA-LRAIEEIKKLCENVDQESVK 392
Query: 558 KVTSKTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
++ + A + I L A P + K +I++G
Sbjct: 393 RIAEQINPCASISEKIDKELQADPPVAVAKGK--------------------VIADGFNE 432
Query: 615 EVARARKAVQSAKEELDSLINMCRKQ---LGMRNLE--FMSVSGITHLIELPANFKVPLN 669
E+ + RK K D L+ + RK+ G+ +L+ F +V G + KVP
Sbjct: 433 ELDKLRKISYGGK---DYLLELQRKEAEATGISSLKIAFNNVFGYYLEVSNTHKDKVPTE 489
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W + + RY +PE+ DQ+ A E++ + + L + Q
Sbjct: 490 WIRKQTLVNAERYITPELKEYEDQILGAEEKIHALETKLFSDLLASVAEFIRPIQLNATL 549
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNL 787
+A LD L AT+++ +VRPV DD + I GRHPV++ L + ++ N L
Sbjct: 550 IAQLDVLLCFATIAQKNYYVRPVVSDDK---VLDIKGGRHPVIEKNLPIGEEYITNSVYL 606
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
E + IITGPNM GKS +RQ LI +MAQ+G FVPA A + ++D I+TR+GASD+
Sbjct: 607 DDETQQIIIITGPNMAGKSALLRQTGLIVLMAQMGCFVPAKEAHVGIVDKIFTRVGASDN 666
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KK 905
+ G STF+ E+NE + IL N + +SL+++DE+GRGTST+DG++IA+A +++L H
Sbjct: 667 LSSGESTFMVEMNETASILNNLSDRSLILLDEIGRGTSTYDGISIAWAIVEFLHNHPNAN 726
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ ++ F+ + ++V+ K +G V +L K+VPG SE
Sbjct: 727 AKTLFATHYHELNELSNSFS-RIKNFNVTV----KEVG-------NKVIFLRKLVPGGSE 774
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
SFG VA++A +PP + RA I +LE E
Sbjct: 775 HSFGIHVAKMAGMPPRVLLRANEILRRLENE 805
>gi|281424692|ref|ZP_06255605.1| DNA mismatch repair protein MutS [Prevotella oris F0302]
gi|281401062|gb|EFB31893.1| DNA mismatch repair protein MutS [Prevotella oris F0302]
Length = 886
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 260/933 (27%), Positives = 442/933 (47%), Gaps = 139/933 (14%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS 144
++K TP+ +Q +K K+P+ LL+ G + +GEDA +AA +LGI +N + S
Sbjct: 4 NDKGLTPMMKQFFSMKAKHPEALLLFRCGDFYETYGEDAAIAAGILGITLTRRNNSVENS 63
Query: 145 I-----PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
+ P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 64 VEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREQIKGKKGLTEMDKMVKRGITE 123
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T A + E+ N+L V + GK G+ ++I
Sbjct: 124 LVTPGVAMADTVLNYKEN------NFLAAV-----HFGK-----------ASCGISFLDI 161
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E +L + SP E+L + + E+
Sbjct: 162 STGEFLTGEGTYDYV----EKLLGNFSPKEVLYNRDHKQDFERFF--------------G 203
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
S+ C M E S + + G G+ ++ + V A
Sbjct: 204 SKYCVF-------------EMDEWVFSEQNARQKLLKHFGTKSLKGFGVEHLRN-GVIAS 249
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGTLLHI 431
+++L+ +I + S + + L T++ LE++ +GS +LL++
Sbjct: 250 GAILQYLELTQHTQINHI-TSLSRIEEDKYVRLDRFTIRSLELVAPMQEDGS---SLLNV 305
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T+T G R+LRRW+ PL D I+ RLD V D
Sbjct: 306 IDRTVTAMGGRMLRRWLVFPLKDVAPINERLDIV------------------------DY 341
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
+P+F ++ L +G D++R I+++ +P E + + A L A + +++ +
Sbjct: 342 FFQKPEFRQLIDEQLHRVG---DLERIISKVAVGRVSPREIVQLKNA-LDAVRPIKEACL 397
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
Y E K + ++L L S I K +L + +GD +I++G
Sbjct: 398 ---YSENEALKRIG----EQLNLCESIKTRIEKEIQLDPP---QLITKGD-----VIADG 442
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFK--VP 667
E+ R+ ++ K+ L + ++ G+ +L+ F +V G + +E+ FK VP
Sbjct: 443 YDDELDELREMSRNGKDYLLKIQEKEAEETGISSLKVGFNNVFG--YYLEVRNTFKDKVP 500
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
W + + + RY +PE+ +++ A E++ + + + + + Q
Sbjct: 501 EGWIRKQTLAQAERYITPELKEYEEKILGAEEKILALEARLFSELVLAMQDFIPQIQINA 560
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDT 785
LA +DCL + A S ++RP +DD E + I GRHPV++T L + +VPND
Sbjct: 561 NLLARVDCLLSFAKTSEENGYIRPQ-IDDSEV--LDISQGRHPVIETQLPLGERYVPNDV 617
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L +++ +ITGPNM GKS +RQ ALI ++AQVG FVPA A++ ++D I+TR+GAS
Sbjct: 618 YLDTQKQQIMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAERAKIGLVDKIFTRVGAS 677
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D++ G STF+ E+ EAS IL N +++SLV+ DELGRGTST+DG++IA+A ++YL E K
Sbjct: 678 DNLSLGESTFMVEMTEASNILNNVSSRSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPK 737
Query: 906 --CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
LF THY ++ +++ F+ + Y+VS + D V +L K++ G
Sbjct: 738 ARARTLFATHYHELNEMEKNFS-RIKNYNVSV-----------KEVDGKVIFLRKLMKGG 785
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
SE SFG VA++A +P S + RA I +LEA+
Sbjct: 786 SEHSFGIHVAEIAGMPRSIVKRANAILKELEAD 818
>gi|164688070|ref|ZP_02212098.1| hypothetical protein CLOBAR_01715 [Clostridium bartlettii DSM
16795]
gi|164602483|gb|EDQ95948.1| DNA mismatch repair protein MutS [Clostridium bartlettii DSM 16795]
Length = 957
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 258/930 (27%), Positives = 438/930 (47%), Gaps = 156/930 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q + K KYPD +L +G + F EDA +A+KVL G L+
Sbjct: 7 KLTPMMKQYFDTKEKYPDCILFFRLGDFYEMFFEDAIVASKVLEIALTGKACGLEERAPM 66
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+P N ++ +LV G+KV + +Q E A+ G R + + T T
Sbjct: 67 CGVPFHAANAYISKLVENGYKVAIGEQMEDPAL------AKGIVKREVIRVVTPGT---- 116
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
V G ++NYL+ + ++ N+G +S D+ GE
Sbjct: 117 --VLEGNLLENKKNNYLMSLYKENDNIG---------------------LSYVDISTGET 153
Query: 263 NDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N L R L + +SP+E+++ K L A A SN+ + + ++
Sbjct: 154 NATVLKRDKLIEEIAKVSPSEIIINDL---DYIKNLEAIAS-LSNIYLNTNFDEAYLDEN 209
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
L + S ++ LS + E G ++ ++N + + I ++
Sbjct: 210 ILKQYFS------DEYLS-----KVKFDENGLINRSLCVLLNYIYNTQKQVTSNINNINV 258
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ M L RS ++E+T + T ++ G+LLH+++ T T G
Sbjct: 259 YNSSNYMVLDMFTRS---NLELTETIRTKKK------------KGSLLHVLDKTSTAMGG 303
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R+LR++V PL D+ I RLD + EI D+ + + ++E I
Sbjct: 304 RMLRKYVEEPLVDKKRIQNRLDVIEEI---------------KDDYSLRIDLIE-----I 343
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI-----LYAGKQLQQLHIDGEYR 556
L +V DI+R +I TP E I + +I L + I Y
Sbjct: 344 LKNVY-------DIERICGKIAFEKVTPKELINLKNSIEKLPELKRRIEDSDAEILKNYA 396
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLL-STVNKEAADQGDLLNLMIISNGQFSE 615
K+ + L+ R IL P++ K ++ S+ N+E + + + +NG F
Sbjct: 397 GKMETLDDIYDLIDRAIL--PEPSITIKDGNIIQSSYNEELRELRE-----VSTNGAFM- 448
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKV 673
+ + N +++ G+++L+ F V G + IE+ K L A +
Sbjct: 449 --------------IKEIENREKEKTGVKSLKIGFNKVFG--YYIEIT---KANLATANI 489
Query: 674 NST---KKTI----RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
+ + K+T+ RY + E+ D++ A E++ ++ + K Q
Sbjct: 490 DDSYIRKQTLSNAERYITEELKIIEDKILHAKEKIGVLEYELFVQVRKYIYDNIDRIQNV 549
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDT 785
+ +A +D + AT++ N+V+P D++ ++ I +GRHPV++ I+ +NFVPNDT
Sbjct: 550 AKIIANIDVFTSFATVADLNNYVKPNINDNN---KLDIKNGRHPVVENIVGEENFVPNDT 606
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L + IITGPNM GKS Y+RQ A+I +MA +GSFVPA A++ + D I+TR+GAS
Sbjct: 607 YLSDDENIINIITGPNMAGKSTYMRQSAIIVLMAHMGSFVPADFADIPICDRIFTRVGAS 666
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D + G+STF+ E+NE S IL+N T++S VI+DE+GRGTST+DG+++A+A ++Y+ + K
Sbjct: 667 DDLSSGQSTFMVEMNEVSQILKNATSKSFVILDEIGRGTSTYDGISLAWAIVEYIQSNIK 726
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVS 964
C LF THY ++ D++ +F V Y +S K D +++ +L K+V +
Sbjct: 727 CKTLFATHYHELTDLENEFR-EVKNYSISV------------KDDGENIIFLRKIVEQPA 773
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ S+G VA+LA+LP I R++ I + LE
Sbjct: 774 DKSYGIYVAKLAKLPDQVIERSSEILSDLE 803
>gi|288801817|ref|ZP_06407259.1| DNA mismatch repair protein MutS [Prevotella melaninogenica D18]
gi|288335859|gb|EFC74292.1| DNA mismatch repair protein MutS [Prevotella melaninogenica D18]
Length = 886
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 255/933 (27%), Positives = 435/933 (46%), Gaps = 136/933 (14%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------ 139
+K TP+ +Q +K ++P L++ G + +GEDA +A++LGI +N
Sbjct: 5 DKGLTPMMKQFFSMKAQHPGALMLFRCGDFYETYGEDAVESARILGITLTRRNNGGNGDS 64
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKA------GPFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E K GK RG++
Sbjct: 65 IEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREEIKGKKCLSAMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + +++V + E+N+L V FG G GV ++I
Sbjct: 125 LVTPG-VAMSDNVLNYK-----ENNFLAAVH-------------FGKG---SCGVSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E +L + P E+L + + E+ Y G R+
Sbjct: 163 STGEFLTGEGTFDYV----EKLLGNFQPKEVLFDRAKKQDFER----YFG----TRLCTF 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D ++ A L ++ G L + V N A I+ ++
Sbjct: 211 EMDDWVFTDQTAR-QKLLKHFGTKNL-----KGFGVDHLNNGVVAAGAILQYLEITQHT- 263
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGTLLHI 431
I H+ S + + + T++ LE++ N +GS +LL++
Sbjct: 264 --QINHI------------TSLARIEEDKYVRMDRFTIRSLELIAPMNEDGS---SLLNV 306
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
+++T+T G R+LRRW+ PL D I+ RLD V D
Sbjct: 307 IDNTITPMGGRMLRRWMVFPLKDEKPINERLDVV------------------------DY 342
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
EP F ++ +G D++R I+++ +P E + + A++ +Q +
Sbjct: 343 LFREPDFRECINEQFHRIG---DLERIISKVAVGRVSPREVVQLKNALM----AIQPVKT 395
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
Y + T K + L ++ + K + + ++GD++ L G
Sbjct: 396 ACLYAKSDTLKRIGEQL-------NLCESLRDRIEKEIQPDPPQLVNKGDVIAL-----G 443
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLN 669
E+ R + K+ L + Q G+ +L+ + + +E+ F KVP N
Sbjct: 444 FNQELDDLRSIRDNGKQYLLEIQEKEIAQTGITSLKIGFNNVFGYYLEVRNTFKDKVPEN 503
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W + + + RY +PE+ +++ A+E++ + + +++ + + Q
Sbjct: 504 WIRKQTLAQAERYITPELKEYEEKILGADEKILALETQLYMELIQDMQEFIPQIQINANL 563
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNL 787
+A LDCL + +S+ + +VRPV VDD E + I GRHPV++T L + +VPND L
Sbjct: 564 IAHLDCLLSFMKVSQLQRYVRPV-VDDSEVIDIK--QGRHPVIETQLPIGEQYVPNDVLL 620
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
E + +ITGPNM GKS +RQ ALI ++AQ+G FVPA A + ++D I+TR+GASD+
Sbjct: 621 DTEHQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDN 680
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
I G STF+ E+ EAS IL N T++SLV+ DELGRGTST+DG++IA+A ++YL EH +
Sbjct: 681 ISLGESTFMVEMTEASNILNNVTSRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHSRAQ 740
Query: 908 --VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ +++ F + ++VS + D + ++ K+ G SE
Sbjct: 741 ARTLFATHYHELNEMEKNFP-RIKNFNVSV-----------KEVDGKIIFVRKLEKGGSE 788
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
SFG VA++A +P S + RA +I +LE + S
Sbjct: 789 HSFGIHVAEIAGMPRSIVKRANIILKELEKDNS 821
>gi|325268300|ref|ZP_08134933.1| DNA mismatch repair protein MutS [Prevotella multiformis DSM 16608]
gi|324989442|gb|EGC21392.1| DNA mismatch repair protein MutS [Prevotella multiformis DSM 16608]
Length = 887
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 259/935 (27%), Positives = 435/935 (46%), Gaps = 144/935 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------ 139
+K TP+ +Q +K ++P L++ G + +GEDA +AK+LGI +N
Sbjct: 5 DKGLTPMMKQFFSMKAQHPGALMLFRCGDFYETYGEDAVESAKILGITLTRRNNGGNCDS 64
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 65 IEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREAIKGKKGLSAMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + +++V + E+N+L V FG G GV ++I
Sbjct: 125 LVTPG-VAMSDNVLNYK-----ENNFLAAVH-------------FGKG---SCGVSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E +L + P E+L + + E+ Y G R+
Sbjct: 163 STGEFLTGEGTFDYV----EKLLGNFQPKEVLFDRAKKQDFER----YFG----TRLCTF 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D ++ A L ++ G L + V N A I+ Q L
Sbjct: 211 EMDDWVFTDQTAR-QKLLKHFGTKNL-----KGFGVDHLHNGVVAAGAIL-------QYL 257
Query: 373 ALT----IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGT 427
+T I H+ S + + + T++ LE++ N +G+ +
Sbjct: 258 EITQHTHINHI------------TSLARIEEDKYVRMDRFTIRSLELIAPMNEDGA---S 302
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL ++++T+T G R+LRRW+ PL D I+ RLD V
Sbjct: 303 LLDVIDNTVTPMGGRMLRRWMVFPLKDAKPINERLDVV---------------------- 340
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
D EP F + +G D++R I+++ +P E + + A++ +Q
Sbjct: 341 --DYLFREPDFRECIDEQFHRIG---DLERIISKVAVGRVSPREVVQLKNALM----AIQ 391
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+ Y + T K + L ++ + K + + A +G+ +
Sbjct: 392 PVKTACLYAKSETLKRIGEQL-------NLCESLRDRIEKEIQPDPPQLAAKGN-----V 439
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--K 665
I+ G ++ R + K+ L + +Q G+ +L+ + + +E+ F K
Sbjct: 440 IAPGYDRQLDELRSIRDNGKQYLLEIQEKEAEQTGITSLKIGFNNVFGYYLEVRNTFKDK 499
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP NW + + + RY +PE+ +++ A+E++ + + +++ + + Q
Sbjct: 500 VPENWIRKQTLAQAERYITPELKEYEEKILGADEKILAMEGQLFMELIQDMQEFIPQIQI 559
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPN 783
+A LDCL + +S+ + +VRPV VD E + I GRHPV++T L + +VPN
Sbjct: 560 NANLIAHLDCLLSFMKVSQQQRYVRPV-VDGSEVLDIK--QGRHPVIETQLPIGEQYVPN 616
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D L E + +ITGPNM GKS +RQ ALI ++AQ+G FVPA A + ++D I+TR+G
Sbjct: 617 DVLLDTEHQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRVG 676
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASD+I G STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA+A ++YL EH
Sbjct: 677 ASDNISLGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEH 736
Query: 904 KKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
+ LF THY ++ +++ F + ++VS + D + +L K+ P
Sbjct: 737 PRAQARTLFATHYHELNEMEKSFP-RIRNFNVSV-----------KEVDGKIIFLRKLEP 784
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G SE SFG VA++A +P S + RA VI +LE +
Sbjct: 785 GGSEHSFGIHVAEIAGMPRSIVKRANVILKELETD 819
>gi|87310334|ref|ZP_01092464.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
gi|87286833|gb|EAQ78737.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
Length = 873
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 263/922 (28%), Positives = 416/922 (45%), Gaps = 137/922 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI----YAHLDHNFMTASI 145
TP+ QQ +E K D +L +G + F +DA+ AA+VLG+ ++ A
Sbjct: 4 TPMMQQYLEAKGVCGDAILFFRMGDFYELFNDDAKTAARVLGMTLTSRDKGENATPMAGF 63
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAED 204
P +L+ ++ +L++ G++V + Q E P +A G R ++ + T TL
Sbjct: 64 PHHQLDNYLGKLIHLGYRVAICDQVEN-------PKEAKGIVRREITRIVTPGTLT---- 112
Query: 205 VGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+D ESNYL V GK +GV VE+STG G F
Sbjct: 113 ----DDALLEPRESNYLAAV----ALPGKKETAA-------EVGVAWVEMSTGRFFSGVF 157
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPL----SKQTEKMLLAYAGPASNVRVECASRDCFI 318
L L + +P+E L+ + + E +L+ Y PA F
Sbjct: 158 PTARLADQLARI----APSECLVPEESNVVPTHLHESILMTYR-PAW----------AFG 202
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
GA + +E M TL G + LAV A + +
Sbjct: 203 KEGAGEVLKRHFETM---TLEGF------------------GFGDQDQLAVCAAGAVLEY 241
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L++ ++ + S + + T + LE+ R +G G+LL ++ +T+
Sbjct: 242 LEETQRTSLLHI-ERLTPYRASSTLEIDEATRRSLELTRTMRDGRRDGSLLAAIDRCVTV 300
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
GSRLL W+++PL D I RLD V E+ ++EP
Sbjct: 301 MGSRLLGDWLSNPLTDLEEIHRRLDGVEEL------------------------VLEPAL 336
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HIDGEYRE 557
L SL D++R + R+ A+P + + Y K L++L HI +
Sbjct: 337 ARDLRE---SLKEVYDLERLLARVMTGRASPRD-------LGYICKTLERLPHI----KA 382
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
K+TS+ L L S A L ++ D G +I G +++
Sbjct: 383 KITSRRSSMLRLLEERLDLCSEIRSQLAEALDDSLPLSPRDGG------VICTGFNADLD 436
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNS 675
R K+ + ++ G+ NL+ F V G + ++P ++ + +
Sbjct: 437 HLRGLAAGGKQWIAEYQKQEIERTGIANLKVGFNKVFGYYLEVTNVNRERIPTDYIRKQT 496
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
K RY +PE+ +++ A+E+ + + Q LA LDC
Sbjct: 497 LKNAERYITPELKEYEEKVLSADEKAKDLEYELFGQLRDAVQLDAKRIQQTADVLANLDC 556
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYC 794
L +LA L+R +N+ RP E + I GRHPVLD ++ FVPND L +E +
Sbjct: 557 LLSLAELARERNYCRPQV---GESAVLRILDGRHPVLDLKEIEGGFVPNDAQLDSESGFI 613
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNM GKS YIRQVALI +MAQ+GSFVPA A+L ++D I+ R+GASD + +G+ST
Sbjct: 614 GLITGPNMAGKSTYIRQVALISLMAQMGSFVPAREADLGIVDRIFARVGASDELSRGQST 673
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ E + IL T +SLVI+DE+GRGTST+DGV++A++ ++YL + C LF THY
Sbjct: 674 FMVEMTETARILNTATNRSLVILDEIGRGTSTYDGVSLAWSIVEYLHDKIGCRTLFATHY 733
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ D+++ G V + + D V +L+K+VPG ++ S+G VA+
Sbjct: 734 HELTDLRSSLPGVVN------------LNVAVKEWDDKVIFLHKIVPGAADKSYGIYVAR 781
Query: 975 LAQLPPSCISRATVIAAKLEAE 996
LA +P RA I +LE+E
Sbjct: 782 LAGVPREVNERAKQILNQLESE 803
>gi|432329250|ref|YP_007247394.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
gi|432135959|gb|AGB05228.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
Length = 829
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 260/914 (28%), Positives = 427/914 (46%), Gaps = 151/914 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---AHLDHNFMTASIP 146
TPL +Q ++K KY D +L VG + F EDA++ +K L I + A IP
Sbjct: 3 TPLMRQYHKIKAKYRDAILFFRVGDFYETFEEDAKIVSKELNIVLTRRSKEEPVPMAGIP 62
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDV 205
L+ ++ RLV G++V + +Q E P KA G R + + T TL ED
Sbjct: 63 HHALDAYLSRLVKKGYRVAICEQLE-------DPKKAKGLVKRDVIRIVTPGTL--IEDT 113
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
D +N+L+ V + G A++ISTG+ GE +
Sbjct: 114 LLTYD-----NNFLLSVYRKEET----------------YGFAALDISTGEFFAGELD-- 150
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
G+ +L LSPAE++ SNV ++ + E
Sbjct: 151 --FYGINGEILRLSPAEII--------------------SNVELKVDVPQKIMP----EE 184
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLE 385
S YE++ +D E + + + G +A + T+ LK
Sbjct: 185 YYSDYESLLKDHFKVAEIEGFGIGKYGLKAAAAALKYAKEN--------TMSELKN---- 232
Query: 386 RIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLR 445
I L FR ++ T N LEV +N G E TL +N +T GSRLL+
Sbjct: 233 -ITSLQGYFRDRFLILDSTTLKN----LEVFKNFL-GEERYTLFFTINACVTPMGSRLLK 286
Query: 446 RWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSV 505
RW+ PL + + I R DAV E+ + +L S+
Sbjct: 287 RWMQRPLKNVDEIEKRQDAVEELTKKQ---------------------------MMLESI 319
Query: 506 LTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH 565
L D++R TRI A P + IA+ + + YA Q L ++ E +
Sbjct: 320 RDVLSHIKDLERIKTRISLGRARPKDLIALKEGLKYA----QDLKMNFESK--------- 366
Query: 566 SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL-LNLMIISNGQFSEVARARKAVQ 624
IL S + G K++ + + A GD + +I G E+ R
Sbjct: 367 -------ILREESEKIEG-LGKIVDLIERSIA--GDYPIGDGVIKRGYSRELDSLRDLTL 416
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKVNSTKKTIRY 682
A++ + + R++ G+++L+ + + IE+ AN KVP ++ + + K + R+
Sbjct: 417 HAQDLIGKMEERERRRTGIKSLKIGYNDVMGYYIEVSKANLSKVPDHYKRKQTLKNSERF 476
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
+ E+ ++ A E++ + +A ++ +++ G + +A+A +D + +LA +
Sbjct: 477 ITDELKDLEYRILSAKEKINDIEQALYEEIIEKLKGETSRIARVAEAIAHIDTIQSLAKV 536
Query: 743 SRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNM 802
+ N+ RP+ VD E + I I +GRHPV++ +FVPNDTN+ E + ++TGPNM
Sbjct: 537 ALEWNYTRPI-VD--ESMDIAIKNGRHPVVER--YTDFVPNDTNISGEARFI-MLTGPNM 590
Query: 803 GGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEA 862
GKS Y+RQVALI I+AQ+GSFVPA A++ V+D IYTR+GASD I +GRSTF+ E+ E
Sbjct: 591 AGKSTYMRQVALITILAQMGSFVPADYAKIGVVDRIYTRVGASDDITRGRSTFMMEMVEL 650
Query: 863 SYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKT 922
+ IL T +SL+++DE+GRGTST+DG+AIA++ +++ K +F THY + +++
Sbjct: 651 ANILNTATERSLILLDEIGRGTSTYDGLAIAWSITEHIHNKIKARTIFATHYHHLIELEN 710
Query: 923 KFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSC 982
+V YH++ ++ + ++ KV+PG S+G +VA+LA +P
Sbjct: 711 VLE-NVRNYHIAV-----------KETPDGLVFVRKVMPGGMSKSYGIEVAKLAGVPEDV 758
Query: 983 ISRATVIAAKLEAE 996
+ RA + +E E
Sbjct: 759 VKRAKNVLEMIEEE 772
>gi|375013600|ref|YP_004990588.1| DNA mismatch repair protein MutS [Owenweeksia hongkongensis DSM
17368]
gi|359349524|gb|AEV33943.1| DNA mismatch repair protein MutS [Owenweeksia hongkongensis DSM
17368]
Length = 862
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 253/934 (27%), Positives = 436/934 (46%), Gaps = 141/934 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL +Q ++K+KYPD LL+ VG + FG+DA A+K+LGI N A
Sbjct: 8 TPLMRQYNQIKSKYPDALLLFRVGDFYETFGQDAVKASKILGIVLTKRSNGAAADMELAG 67
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + + RG++ L T + +
Sbjct: 68 FPHHSLDNYLPKLVRAGQRVAICDQLEDPKLTKN------IVKRGVTELVTPGVTTSDQV 121
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ G + N+L + + R G+ +ISTG+ + E N
Sbjct: 122 LKSGSN------NFLAAIYMEKE----------------RFGISFCDISTGEFLVAEGNH 159
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + ++ SL+P+E+L + S + ++ R + D +I A
Sbjct: 160 EYV----DKLIQSLAPSEILFQKNKSAKYFELF--------GNRHYSFALDEWIFKSDFA 207
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
NE N + IEG+ DLA+ A +LK+
Sbjct: 208 ----------------NESLNNHFKTKSLKGFGIEGM----DLAIIAGGAIFHYLKETRH 247
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
+++ + R + + + T++ LE+ NSN + +LL +++HT + GSRLL
Sbjct: 248 DQLGHITGVSR-IEREEFVWMDRFTIRNLELF--NSNSPDGVSLLDVIDHTQSPMGSRLL 304
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
+RW+ PL I R V M + +E + Q +L
Sbjct: 305 KRWLAMPLKKVAAIEDRQLTVEAF---MKKHELAEDIAQ-----------------LLQE 344
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
+ D++R ++++ P K+L QL E+ + K
Sbjct: 345 I-------HDLERLVSKLSTGKIHP--------------KELLQLKKGLEFSNAIKKKC- 382
Query: 565 HSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVARAR 620
A +K+L L A K +L+ST KE +GD +I++G +E+ R
Sbjct: 383 --AKVKQLSLIADQLHECLKLIELVSTSIKENPSVQISKGD-----VIADGVSAELDDLR 435
Query: 621 KAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKK 678
+ S K++L ++ + G+ NL+ F +V G + KVP W + +
Sbjct: 436 DILNSGKDKLLAIQKREAEATGISNLKIAFNNVFGYYLEVRNTHKDKVPAEWVRKQTLVS 495
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
RY + E+ ++ A +++ + + ++ L++ Y + Q Q LA +DCL +
Sbjct: 496 AERYITEELKEYEQKILGAEDKILAIEQKLYNDVLEKALSYLPQIQQNAQVLARIDCLLS 555
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQI 796
A L+++ N+V+P D + ++ I GRHPV++ L ++++ ND L E +
Sbjct: 556 FALLAKSMNYVKPSMDDSY---KLDIKGGRHPVIERQLAAGEDYISNDVLLDREEFQILM 612
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNM GKS +RQ ALI +MAQ+G +VPA +A L V+D I+ R+GASD+I QG STF+
Sbjct: 613 ITGPNMSGKSALLRQTALISLMAQIGCYVPAKAASLGVVDKIFVRVGASDNISQGESTFM 672
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLFVTHYP 915
E++E + IL N + +SLV++DE+GRGTST+DG++IA++ ++L EH + LF THY
Sbjct: 673 VEMSETASILNNLSDRSLVLLDEIGRGTSTYDGISIAWSIAEFLHEHPSRAKTLFATHYH 732
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ +++ F + ++VS + + + ++ K+ PG SE SFG VA++
Sbjct: 733 ELNEMEGAFE-RIRNFNVSV-----------KEVNNSIIFMRKLKPGGSEHSFGIHVAKM 780
Query: 976 AQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRD 1009
A +P ++RA + +LE SS + +D
Sbjct: 781 AGMPGLVVNRAESVLKELEKSRSSGDKKNGKAKD 814
>gi|298711414|emb|CBJ32555.1| MutS protein homolog 3 [Ectocarpus siliculosus]
Length = 1474
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 203/649 (31%), Positives = 314/649 (48%), Gaps = 87/649 (13%)
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGS 474
VL+ ++G E G+L I++ T T +G R+L WV PL I+AR DAV E+
Sbjct: 855 VLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEEL------ 908
Query: 475 YRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA 534
+ +P ++ + +L D+ I + HR P+ ++
Sbjct: 909 ------------------VTDPP--SVMERLRPTLRDLKDLDPAIASLHHRRIQPNRLLS 948
Query: 535 VMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILT---ASSPAVIGKA-AKLLS 590
++ + G + + + ++L A PA + A+ L
Sbjct: 949 LLGTMRKVFGVFHPPTARGADETEGAGPSQQRGGPRSVVLLDALADVPANMAPVIARYLG 1008
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKE----ELDSLINMCRK-QLGMRN 645
+N EAA D + ++ E+ A + ++AK EL S+ + RK L +
Sbjct: 1009 ELNAEAAASDDYVRALVDGESLCKELKTAAEEEEAAKADLETELQSVRTILRKPSLQWKT 1068
Query: 646 LEFMSVSGITHLIEL---PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELT 702
L + S + +L+EL A VP W +V+ TK R+H+PEVL +L A E
Sbjct: 1069 LRTGATSTVEYLVELRKSEAKKLVPSGWMQVSQTKDLARFHTPEVLRLQQELLRARESRN 1128
Query: 703 IVCRAAWDSFLKEFGGY-YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV- 760
+ R AW + + YA F+ AVQAL LD L +LA +++ +VRP + +
Sbjct: 1129 LAARQAWAELVSQVDEECYAGFRTAVQALGTLDALLSLAVVAKLPGYVRPNYRPTADAKG 1188
Query: 761 -----------------QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMG 803
+I + RHP ++ +L FVPND +L R C ++TGPNMG
Sbjct: 1189 DESGGDGGSDDEADGVDEIVLRGARHPTVERVLEGGFVPNDVSLR--RGECLVVTGPNMG 1246
Query: 804 GKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEAS 863
GKS +R ALI I+ Q+GS+V A SA+++ LDG+YTRMGA D + STF+ EL S
Sbjct: 1247 GKSSTVRMAALICILGQMGSYVAADSADMYCLDGVYTRMGAGDDLAADMSTFMVELWHTS 1306
Query: 864 YILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKT- 922
YI++ T +SLV++DELGRGTSTHDGVAIA ATL +++ C LFVTHYP++AD+ +
Sbjct: 1307 YIIKQATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDIGCATLFVTHYPQVADLASD 1366
Query: 923 -KFTGSVGTYHVSYLTSHK----------------------VMGPMDSKSDQDVTYLYKV 959
+G+V H+S++ V P + + VT+LY++
Sbjct: 1367 KSLSGTVRNAHMSFIEDSAAASTEEPPVNEEEVSESAGGGGVGNPKRNAEARGVTFLYRL 1426
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
V G + S+G VA+ A + + I +AA+ AE+ R SAK+
Sbjct: 1427 VVGQAHKSYGLNVARAAGMDEALID----LAARKSAEMRDRSHEVSAKQ 1471
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 103/140 (73%), Gaps = 10/140 (7%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP+EQQVV+LK K+P VLL++E GY++RFFG+DA AAKVL IYAH+DHNF AS+PT
Sbjct: 360 KLTPMEQQVVDLKAKHPGVLLLVECGYRYRFFGDDALAAAKVLRIYAHMDHNFQVASVPT 419
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG----PGKAGPFGRGLSALYTKAT-LEAA 202
FRL VH+RRLV+AG+KVGVV+Q E+AA+KA G K+G F R L+A++++AT +E A
Sbjct: 420 FRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFSQATWVEGA 479
Query: 203 EDV-----GGGEDGCGGESN 217
+ G G GG S
Sbjct: 480 VEALMPSSSGSNTGTGGRSG 499
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 243 VRLGVVAVEISTGDVVYGEFNDGF-LRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAY 300
VR+G++AV++ TG VV+ F +G R L L L P ELLL P LSK+TE + Y
Sbjct: 612 VRVGLIAVDVRTGKVVHDAFEEGSGQRQELHTRLRHLRPLELLLPGPRLSKETEATVARY 671
Query: 301 AGPASN-------VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 353
A + VR E + F A A + Y G+ S+ D + +
Sbjct: 672 CESAVDARGDRRVVRTERLPPEDFCFEAAQASLSKYY---GKGRGSSKPDASEGEKDGNG 728
Query: 354 HRSA------IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSA 407
+ ++++P A+ AL + HL++FGL+R + S S S MTL A
Sbjct: 729 EGGGDGCAPVLTRVLDLPRPAICALGPLMTHLERFGLDRSLA-SPDLSSFSKSQYMTLDA 787
Query: 408 NTLQQLEV 415
TL+ LEV
Sbjct: 788 VTLRDLEV 795
>gi|375084995|ref|ZP_09731788.1| DNA mismatch repair protein MutS [Megamonas funiformis YIT 11815]
gi|374567644|gb|EHR38853.1| DNA mismatch repair protein MutS [Megamonas funiformis YIT 11815]
Length = 912
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 250/932 (26%), Positives = 417/932 (44%), Gaps = 163/932 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI----YAHLDHNFMTA 143
K TP+ QQ +K +PD +L +G + F +DA + +K L + +
Sbjct: 2 KLTPMMQQYQAVKNAHPDQILFFRLGDFYEMFLDDAILVSKELELTLTKRSTAGDGIPMC 61
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P ++ +LVN G+KV + +Q P G R + + T T
Sbjct: 62 GVPYHAAESYINKLVNKGYKVAICEQI-------GDPKAKGLTKREVIKIITPGT----- 109
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
V ++NY+ + +++ + ++ G D ISTG+ Y +
Sbjct: 110 -VMNESALTSSKNNYITLIYEEN-------HAIYLAGAD---------ISTGECFYSIY- 151
Query: 264 DGFLRSGLE-AVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
DG R L L L ELLL +P S Y G N + +C +
Sbjct: 152 DGPDRCQLLFDELYRLMMPELLLIKPFS---------YEGELKNF-LSLRLNNCLVN--E 199
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
L E+ S E++ Q+ DV + +++ A + I + + + + + HL +
Sbjct: 200 LTEITSQVEDLML--------QHFDVHNRPDNKIAHKAIATLLEYLHETVKTDLTHLNKL 251
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
L S + + TL+ LE+ RN +G + TL +++ T T GSR
Sbjct: 252 TY------------LDSSKSLFIDTYTLRNLEITRNLRDGGKKDTLYDVLDFTKTAMGSR 299
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LLR+W+ +PL I+ RLDAV+ + + + +
Sbjct: 300 LLRKWLEYPLLSPKKINDRLDAVANLVSN---------------------------FSLR 332
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
+++ L D +R +TR+ TA + A +++ LY
Sbjct: 333 NNLREQLKEIYDFERLLTRMEVGTANARDMNA-LKSSLY--------------------- 370
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM---------------- 606
+L A ++ AKLL+ ++++ + DL+ L+
Sbjct: 371 ----------VLPAIKKSLSKATAKLLANIHQKISTYDDLVVLIDKAIVEDPSFSIREGG 420
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF 664
I +G E+ R +++K L + + + G+++L+ + V G + +
Sbjct: 421 FIKDGYNQELDEYRNIAKNSKRLLQQMEEDEKNKTGIKSLKIGYNKVFGYYIEVRHSSTE 480
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP N+ + + RY +PE+ ++ A E++ + + + Q
Sbjct: 481 MVPENYIRKQTLANAERYITPELKEFETKILGAQEKIVQLEYNLFTELRDILKTQISSIQ 540
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPN 783
+A LD L +LA N++RP +DD IHI GRHP+++ IL D FVPN
Sbjct: 541 NTAHEIAILDVLVSLAQAGDEYNYIRPKLLDDG---TIHIKDGRHPLVERILNRDLFVPN 597
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT+L + IITGPNM GKS Y+RQ AL+ +M QVGSF+PA A + +D I+TR+G
Sbjct: 598 DTHLDNAQNEIMIITGPNMAGKSTYMRQSALLTLMTQVGSFIPAREASISPVDKIFTRIG 657
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASD + G+STF+ E+NE S+IL+ T +SLVI+DE+GRGTST+DG++IA A ++++ +H
Sbjct: 658 ASDDLVSGQSTFMVEMNEVSHILKYATNKSLVILDEIGRGTSTYDGMSIARAVIEHIRDH 717
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHV-SYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
LF THY ++ D++ HV +Y + K G DVT+L +++ G
Sbjct: 718 IGAKTLFATHYHELTDLEDDV-------HVKNYCIAVKEKG-------SDVTFLRRIIRG 763
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ S+G VA+LA LP + RA I LE
Sbjct: 764 SADKSYGIHVAKLAGLPQEVVKRAETILIDLE 795
>gi|255718761|ref|XP_002555661.1| KLTH0G14476p [Lachancea thermotolerans]
gi|238937045|emb|CAR25224.1| KLTH0G14476p [Lachancea thermotolerans CBS 6340]
Length = 1276
Score = 290 bits (743), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 253/944 (26%), Positives = 418/944 (44%), Gaps = 108/944 (11%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV--LGIYAHL 136
PSS + K+TP E+Q E+K++ D ++ + G F + +DA + ++ L I
Sbjct: 340 PSSAWS---KFTPFEKQYWEIKSRMWDCIVFFKKGKFFELYEKDALLGNQLFDLKIAGGG 396
Query: 137 DHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTK 196
N A IP + + + G+KV V Q E+ K G G R L + T
Sbjct: 397 RANMQLAGIPEMSFDYWAMQFIQHGYKVAKVDQRESMLAKEMREGNKGIVKRELQHVLTS 456
Query: 197 ATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVF--GDGFDVRLGVVAVEIST 254
TL D G + ++ + + + ++ G NG GV ++ +T
Sbjct: 457 GTLT---DSGMLQ---SDQATFCLAIKEEAGTYHDTENGTVEPSKTESKIFGVAFIDTAT 510
Query: 255 GDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECAS 313
G++ EF D S L+ ++ + P E+++ + L K++ A P +
Sbjct: 511 GEIELLEFEDDSECSKLDTLMSQVKPKEIIMEKNNLCNLAHKIVKFNAQPQAIFNY---- 566
Query: 314 RDCFIGGGALAEVMSLYE-NMGEDTLSNNEDQNMDVPEQGNHRSAI--EGIMNMPDLAVQ 370
L V Y+ N D L++ E + E H A+ +
Sbjct: 567 ---------LKPVEEFYDFNKTFDELTSTETKYFADME---HWPAVLTHYFEKGKKVGFS 614
Query: 371 ALALTIRHLKQFGLERIMCLGASFRS---LSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
A + +LK L+ M + + + + L TLQ LE+ N+ + S+ GT
Sbjct: 615 AFGGLLSYLKWLKLDEAMITMGNIKEYNPIRSQNSLVLDGVTLQNLEIFCNSFDNSDRGT 674
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
L ++N +T G R+L++WV HPL + I RLD+V
Sbjct: 675 LFKLLNRAITPMGKRMLKKWVVHPLLQKKDIEMRLDSV---------------------- 712
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF---IAVMQAILYAGK 544
D+ + + + +L L+ L PD++R + R+ +F I ++I
Sbjct: 713 --DLLLTKIEIREVLEDKLSLL---PDLERFLARVHSGALKIKDFNRVIEGFESITGLIA 767
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+LQ + G + + I A S V G K+A + G
Sbjct: 768 KLQNFELTGSLQ-----------VFLNQIPEALSEKVEGWVGAF---DRKKAVNDG---- 809
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--A 662
++I G E R+ + ++ ++ELD + +KQ N++F + IE+P A
Sbjct: 810 VIIPERGVEPEFDRSLQGIKDLEDELDGHLREYKKQFKCSNIQFKDSGKEIYTIEVPMSA 869
Query: 663 NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
++P +W ++ + K RY+SP V +A A E + + K+F +Y +
Sbjct: 870 TKQIPSDWIQMGANKSNKRYYSPGVAKLARSMAEAREMHKSLEESLKSRLYKKFDLHYQD 929
Query: 723 -FQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSG-------RHPVL 772
+ + A+A +DC+ +LA S + F RP FVD+ +PV + +G RHP
Sbjct: 930 VWMPTLLAVARMDCILSLARASESLGFPCCRPSFVDEVDPVTGNKLNGFVNFKELRHPCF 989
Query: 773 D--TILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+ T +F+PND +L + ++TG N GKS +R + IMAQVG +VPA A
Sbjct: 990 NMGTTSTKDFIPNDISLGRDSYQIGLLTGANAAGKSTVLRMTCIAVIMAQVGCYVPAEEA 1049
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
L +D I TR+GA+D+I QG+STF EL+E IL T +SL+++DELGRG S+ DG
Sbjct: 1050 TLSPIDKIMTRLGANDNIMQGKSTFFVELSETKKILDIATNRSLLVLDELGRGGSSSDGF 1109
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
AIA + L ++ H + + F THY + +G H + K+ +D KS
Sbjct: 1110 AIAESVLHHVATHIQSLGFFATHYGGLG---------LGFKHHPKVKPLKMNIMVDEKS- 1159
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+++T+LYK+V G SE SFG VA + + + RA V A E
Sbjct: 1160 REITFLYKLVEGQSEGSFGMHVASMCGIAKEIVDRAQVAADNKE 1203
>gi|167758190|ref|ZP_02430317.1| hypothetical protein CLOSCI_00528 [Clostridium scindens ATCC 35704]
gi|167664087|gb|EDS08217.1| DNA mismatch repair protein MutS [Clostridium scindens ATCC 35704]
Length = 876
Score = 290 bits (743), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 261/935 (27%), Positives = 440/935 (47%), Gaps = 153/935 (16%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
QQ ++ K +YPD +L +G + F +DA A+K L G L +P
Sbjct: 3 QQYMQTKKEYPDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLKERAPMCGVPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
++ ++ RLV+ G+KV + +Q E A G R + + T T + +
Sbjct: 63 AVDGYLNRLVSKGYKVAICEQMEDPATAK------GLVKRDVVRIVTPGTNLDTQSLDET 116
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+ +NY++CVV D R G+ +++TGD E +D
Sbjct: 117 K------NNYIMCVV------------YIAD----RYGLSVADVTTGDYFVTELDDS--- 151
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMS 328
L + P+EL+ + + L + + S D + A+ + +
Sbjct: 152 EKLFDEIYKFMPSELICNEAFYMSGMDLDLM----KEKLGITIYSLDAWYFDDAICQ-RT 206
Query: 329 LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHL---KQFGL 384
L E+ H S +EG+ ++ D + A +++L ++ L
Sbjct: 207 LKEHF--------------------HVSTMEGLGLSDYDCGIIAAGALLQYLIETQKRDL 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I L A + M L ++T + LE+ + G+LL +++ T T G+R L
Sbjct: 247 SHITRLSA----YATGKYMLLDSSTRRNLELCETLREKHKRGSLLWVLDKTKTAMGARCL 302
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
R+++ PL D+N I RLDAV E+ ++ S E + ++ + P +
Sbjct: 303 RKFIEQPLIDKNSIERRLDAVDELKQNAIS---REEIREY---------LTPVY------ 344
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HIDGEYREKVTSKT 563
D++R + +I +++A P + IA + L L HI K +
Sbjct: 345 ---------DLERLVCKITYQSANPRDLIAFKSS-------LSMLPHI------KYILEE 382
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVARA 619
+ S LLK L + + L+ KE A +G II +G EV R
Sbjct: 383 MKSPLLKDLYERLDT---LEDLCHLVEEAIKEDPPLAMKEGG-----IIRDGYNEEVDRL 434
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTK 677
R A K+ L L R++ G++NL+ + +E+ +FK VP + + +
Sbjct: 435 RSAKSDGKDWLAKLETDEREKTGIKNLKIRYNKVFGYYLEVTNSFKHMVPDYYTRKQTLA 494
Query: 678 KTIRYHSPEVLTALDQLALANEEL-----TIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
RY PE+ D + A ++L + C A D KE Q +A+A
Sbjct: 495 NAERYIIPELKELEDTILGAEDKLYALEYQLYCEAR-DKIAKEV----LRIQTTAKAIAQ 549
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAER 791
LD ++A ++ +VRP +E I I GRHPV++ ++ D F+ NDT L+ ++
Sbjct: 550 LDAFASMALVAEQSRYVRPKI---NEKGVIDIKDGRHPVVEKMIPNDMFISNDTYLNDKK 606
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA+SA++ ++D I+TR+GASD + G
Sbjct: 607 NRISIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAASADIGLVDRIFTRVGASDDLASG 666
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVL 909
+STF+ E+ E + ILRN T++SL+I+DE+GRGTST DG++IA+A ++++ + L
Sbjct: 667 QSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVIEHISSSRLLGAKTL 726
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ +++ K +V Y ++ + K D D+ +L K+V G ++ S+G
Sbjct: 727 FATHYHELTELEGKI-DNVNNYCIA----------VKEKGD-DIIFLRKIVKGGADKSYG 774
Query: 970 FKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQN 1003
+VA+LA +P S SRA I +L A++++R+++
Sbjct: 775 IQVARLAGVPESVTSRAREIVEELVHADITTRIKD 809
>gi|332881597|ref|ZP_08449246.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357045679|ref|ZP_09107314.1| DNA mismatch repair protein MutS [Paraprevotella clara YIT 11840]
gi|332680595|gb|EGJ53543.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355531541|gb|EHH00939.1| DNA mismatch repair protein MutS [Paraprevotella clara YIT 11840]
Length = 902
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 259/958 (27%), Positives = 432/958 (45%), Gaps = 192/958 (20%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-------FMT 142
TP+ +Q +LK K+PD +++ G + + EDA +A+++LGI N
Sbjct: 36 TPMMKQFYDLKAKHPDAIMLFRCGDFYETYCEDAVVASEILGITLTKRSNGGRNGEPVEM 95
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A P L+ ++ +L+ AG +V + Q E + RG++ L T
Sbjct: 96 AGFPYHALDTYLPKLIRAGRRVAICDQLEDPKLTK------TLVKRGITELVTPG----- 144
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
V ++ + N + V + NV GV ++ISTG+ + E
Sbjct: 145 --VSMNDNVLSYKENNFLAAVHFNKNV---------------CGVAFLDISTGEFLTAEG 187
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
++ + +L + SP E+L E R+ F G
Sbjct: 188 TSEYV----DKLLGNFSPKEVLF------------------------ERGKRNLFEG--- 216
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
N G + D + + RSA E ++ +++LK F
Sbjct: 217 ---------NFGTKFFTFELDDWV-----FSERSATEKLLK---------HFEVKNLKGF 253
Query: 383 GLERIMCLGASFRSLSGSMEMT---------------------LSANTLQQLEVLRNNSN 421
G++ + C + + +EMT L T++ LE+L + +
Sbjct: 254 GIDHLKCGIVASGVILQYLEMTQHSQIGHITSISRIEEERYVRLDKFTVRNLELLNSMVD 313
Query: 422 GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESV 481
G +LL +++ T+T G+RL+RRW+ PL D ++ RLD V
Sbjct: 314 GG--NSLLGVIDRTITPMGARLMRRWILFPLKDEKPVNERLDVV---------------- 355
Query: 482 GQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY 541
D EP+F ++S L +G D++R I+++ +P + +
Sbjct: 356 --------DYFFREPEFKELISDQLHLMG---DLERIISKVSVGRVSPRDVV-------- 396
Query: 542 AGKQLQQLHIDGEYREKVTSKTLHSA--LLKRLILTASSPAVIGKAAKLLSTVNKEAAD- 598
QL + + E + + H++ LKR IG+ L +++ A
Sbjct: 397 ------QLKVALQAIEPIKTACEHASDETLKR----------IGEQLNLCASIRDRIARE 440
Query: 599 -QGD---LLNLM-IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSV 651
Q D L+N +I+ G E+ R K+ L + + G+ +L+ + +V
Sbjct: 441 VQNDPPLLVNKGGVIAEGVDRELDELRHIAFEGKDYLLKIQQRETELTGIPSLKISYNNV 500
Query: 652 SGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
G + KVP +W + + RY + E+ +++ A +++ ++ ++
Sbjct: 501 FGYYLEVRNTHKDKVPADWIRKQTLVNAERYITQELKEYEEKIMGAQDKILVLETKLYND 560
Query: 712 FLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPV 771
+ + Q LA LDCL + A ++++ ++RPV DD + I GRHPV
Sbjct: 561 LVLALAEFTPAIQINANLLARLDCLLSFAQVAQDNRYIRPVIQDDD---VLDIKQGRHPV 617
Query: 772 LDTILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
++ L + ++ ND L E++ IITGPNM GKS +RQ ALI +MAQ+G FVPA S
Sbjct: 618 IEKELPVGEQYIANDVYLDTEKQQIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAES 677
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
A + ++D I+TR+GASD+I G STF+ E+NEA+ IL N +++SLV+ DELGRGTST+DG
Sbjct: 678 AHIGLVDKIFTRVGASDNISMGESTFMVEMNEAANILNNISSRSLVLFDELGRGTSTYDG 737
Query: 890 VAIAYATLDYLLEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
++IA+A ++Y+ E+KK LF THY ++ +++ K V Y+VS
Sbjct: 738 ISIAWAIVEYIHENKKGRARTLFATHYHELNEME-KLYPRVKNYNVSV-----------R 785
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRS 1005
+ DQ V +L K+ G SE SFG VA+LA +P S +SRA I +LE+ S V S
Sbjct: 786 EVDQKVIFLRKLERGGSEHSFGIHVAKLAGMPKSIVSRANTILKELESANSKDVMKNS 843
>gi|354474750|ref|XP_003499593.1| PREDICTED: DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1297
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 261/972 (26%), Positives = 426/972 (43%), Gaps = 121/972 (12%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP ++ E+K++ D+++ +VG + + DA + LG+ + N+ + P
Sbjct: 344 TPGMRKWWEIKSQNFDLVIFYKVGKFYELYHMDAVIGVNELGL-VFMKGNWAHSGFPEIA 402
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAI---KAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
LV G+KV V+QTET + + F R + + + + G
Sbjct: 403 FGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREVCRIITKGTQTYG 462
Query: 207 GGE-DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
E D S YL+ + + + + G GV V+ S G G+F D
Sbjct: 463 VLEGDPSESNSRYLLSLKEKEED---------SSGHTRVYGVCFVDTSLGKFFIGQFPDD 513
Query: 266 FLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
S ++ P ++L + LS +T+ +L G S+ E I G
Sbjct: 514 RHCSRFRTLVAHYPPVQILFEKGNLSTETKTVL---KGSLSSCLQEG-----LIPGSQFW 565
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAI---EGIMNMP----DLAVQALALTIR 377
+ + E+ + + + V G +S + I P +LA+ AL +
Sbjct: 566 DATKTLRTLLEEGYFSGKSEGSGVVLPGVLKSMTSESDSIGLTPGEKSELALSALGGCVF 625
Query: 378 HLKQFGLERIMCLGASFRSL------------------SGSMEMTLSANTLQQLEVLRNN 419
+LK+ +++ + A+F + S M L A TL LE+ N
Sbjct: 626 YLKKCLIDQELLSMANFEEYFPLDSDKVTTVRPGAIFTTASQRMVLDAVTLNNLEIFLNG 685
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
+NGS GTLL ++ T +G RLL++W+ PLC + IS RLDAV ++
Sbjct: 686 TNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVGDL----------- 734
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP--SEFIAVMQ 537
+ D+ N V L + PD++R +++I H +P S+ +
Sbjct: 735 -MALPDKVNE---------------VTDLLKKLPDLERLLSKI-HNIGSPLKSQNHPDSR 777
Query: 538 AILYAGKQLQQLHI-------DG--------EYREKVTSKTLHSALLKRLILTASSPAVI 582
AI+Y + I +G E E V L + + L SP
Sbjct: 778 AIMYEETTYSKKKIIDFLSTLEGFKVVCKIIELMEGVADDFKSKTLRRVVTLQTKSPE-- 835
Query: 583 GKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCR 638
G+ L + +N+ ++ L+ G + +A ++ ++ L ++ R
Sbjct: 836 GRFPDLSAELNRWDTAFDHEKARKTGLITPKAGFDPDYDQALADIKENEQSLLEYLDKQR 895
Query: 639 KQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLA 695
++G R + + + + +E+P NF +P + ++ K RY + + L L
Sbjct: 896 SRIGCRTIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLSNLI 955
Query: 696 LANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVF 753
A E + + F Y ++Q+A++ +A LD L LA S+ + RPV
Sbjct: 956 NAEERRDMSLKDCMRRLFYNFAKNYKDWQSAIECIAVLDVLLCLANYSQGGDGPMCRPVI 1015
Query: 754 V---DDHEPVQIHICSGRHP-VLDTILLDNFVPND-------TNLHAEREYCQIITGPNM 802
+ +D P + + RHP V T D+F+PND + YC ++TGPNM
Sbjct: 1016 LLPGEDTHPF-LELKGSRHPCVTKTFFGDDFIPNDILIGCEEEGEENGKAYCVLVTGPNM 1074
Query: 803 GGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEA 862
GGKS IRQ L+ +MAQ+G +VPA L ++D ++TR+GASD I G STF EL+E
Sbjct: 1075 GGKSTLIRQAGLLAVMAQLGCYVPAEECRLTLVDRVFTRLGASDRIMSGESTFFVELSET 1134
Query: 863 SYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKT 922
+ ILR+ TA SLV+VDELGRGT+T DG AIA A + L E KC LF THY + + +
Sbjct: 1135 ASILRHATAHSLVLVDELGRGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYS 1194
Query: 923 KFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSC 982
K SV H++ + ++ P S + +T+LYK + G S+GF A+LA LP
Sbjct: 1195 KNV-SVRLGHMACMVENECEDP----SQETITFLYKFIQGACPKSYGFNAARLANLPEEV 1249
Query: 983 ISRATVIAAKLE 994
I + A + E
Sbjct: 1250 IRKGHRKAREFE 1261
>gi|327312778|ref|YP_004328215.1| DNA mismatch repair protein MutS [Prevotella denticola F0289]
gi|326945312|gb|AEA21197.1| DNA mismatch repair protein MutS [Prevotella denticola F0289]
Length = 887
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 259/935 (27%), Positives = 435/935 (46%), Gaps = 144/935 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------ 139
+K TP+ +Q +K ++P L++ G + +GEDA +AK+LGI +N
Sbjct: 5 DKGLTPMMKQFFSMKAQHPGALMLFRCGDFYETYGEDAVESAKILGITLTRRNNGGNCDS 64
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 65 IEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREAIKGKKGLSAMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + +++V + E+N+L V FG G GV ++I
Sbjct: 125 LVTPG-VALSDNVLNYK-----ENNFLAAVH-------------FGKG---ACGVSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E +L + P E+L + + E+ Y G R+
Sbjct: 163 STGEFLTGEGTFDYV----EKLLGNFQPKEVLFDRAKKQDFER----YFG----TRLCTF 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D ++ A L ++ G L + V N A I+ Q L
Sbjct: 211 EMDDWVFTDQTAR-QKLLKHFGTKNL-----KGFGVDHLHNGVVAAGAIL-------QYL 257
Query: 373 ALT----IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGT 427
+T I H+ S + + + T++ LE++ N +G+ +
Sbjct: 258 EITQHTHINHI------------TSLARIEEDKYVRMDRFTIRSLELIAPMNEDGA---S 302
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL ++++T+T G R+LRRW+ PL D I+ RLD V
Sbjct: 303 LLDVIDNTVTPMGGRMLRRWMVFPLKDAKPINERLDVV---------------------- 340
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
D EP F + +G D++R I+++ +P E + + A++ +Q
Sbjct: 341 --DYLFREPDFRECIDEQFHRIG---DLERIISKVAVGRVSPREVVQLKNALM----AIQ 391
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+ Y + T K + L ++ + K + + A +G+ +
Sbjct: 392 PVKTACLYAKSETLKRIGEQL-------NLCESLRDRIEKEIQPDPPQLAAKGN-----V 439
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--K 665
I+ G ++ R + K+ L + +Q G+ +L+ + + +E+ F K
Sbjct: 440 IAPGYDRQLDELRSIRDNGKQYLLEIQEKEAEQTGITSLKIGFNNVFGYYLEVRNTFKDK 499
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP NW + + + RY +PE+ +++ A+E++ + + +++ + + Q
Sbjct: 500 VPENWIRKQTLAQAERYITPELKEYEEKILGADEKILAMEGQLFMELIQDMQEFIPQIQI 559
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPN 783
+A LDCL + +S+ + +VRPV VD E + I GRHPV++T L + +VPN
Sbjct: 560 NANLIAHLDCLLSFMKVSQQQRYVRPV-VDGSEVLDIK--QGRHPVIETQLPIGEQYVPN 616
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D L E + +ITGPNM GKS +RQ ALI ++AQ+G FVPA A + ++D I+TR+G
Sbjct: 617 DVLLDTEHQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRVG 676
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASD+I G STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA+A ++YL EH
Sbjct: 677 ASDNISLGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEH 736
Query: 904 KKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
+ LF THY ++ +++ F + ++VS + D + +L K+ P
Sbjct: 737 PRVQARTLFATHYHELNEMEKSFP-RIRNFNVSV-----------KEVDGKIIFLRKLEP 784
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G SE SFG VA++A +P S + RA VI +LE +
Sbjct: 785 GGSEHSFGIHVAEIAGMPRSIVKRANVILKELETD 819
>gi|330997284|ref|ZP_08321137.1| DNA mismatch repair protein MutS [Paraprevotella xylaniphila YIT
11841]
gi|329571079|gb|EGG52786.1| DNA mismatch repair protein MutS [Paraprevotella xylaniphila YIT
11841]
Length = 873
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 259/954 (27%), Positives = 433/954 (45%), Gaps = 184/954 (19%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-------FMT 142
TP+ +Q +LK K+PD +++ G + + EDA +A+++LGI N
Sbjct: 7 TPMMKQFYDLKAKHPDAIMLFRCGDFYETYCEDAVVASEILGITLTKRSNGGRNGEPVEM 66
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A P L+ ++ +L+ AG +V + Q E + RG++ L T
Sbjct: 67 AGFPYHALDTYLPKLIRAGRRVAICDQLEDPKLTK------TLVKRGITELVTPG----- 115
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
V ++ + N + V + NV GV ++ISTG+ + E
Sbjct: 116 --VSMNDNVLSYKENNFLAAVHFNKNV---------------CGVAFLDISTGEFLTAEG 158
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
++ + +L + SP E+L E R+ F G
Sbjct: 159 TAEYV----DKLLGNFSPKEVLF------------------------ERGKRNLFEG--- 187
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
N G + D + + RSA E ++ +++LK F
Sbjct: 188 ---------NFGTKFFTFELDDWV-----FSERSATEKLLK---------HFEVKNLKGF 224
Query: 383 GLERIMCLGASFRSLSGSMEMT---------------------LSANTLQQLEVLRNNSN 421
G++ + C + + +EMT L T++ LE+L + +
Sbjct: 225 GIDHLKCGIVASGVILQYLEMTQHSQIGHITSISRIEEERYVRLDKFTVRNLELLNSMVD 284
Query: 422 GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESV 481
G +LL +++ T+T G+RL+RRW+ PL D ++ RLD V
Sbjct: 285 GG--NSLLGVIDRTITPMGARLMRRWILFPLKDEKPVNERLDVV---------------- 326
Query: 482 GQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY 541
D EP+F ++S L +G D++R I+++ +P + + + A+
Sbjct: 327 --------DYFFREPEFKELVSDQLHLMG---DLERIISKVSVGRVSPRDVVQLKVAL-- 373
Query: 542 AGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK----LLSTVNKEAA 597
+ ++ + I E+ T K + ++L L AS I + + LL VNK
Sbjct: 374 --QAIEPIKIACEHASDETLKRIG----EQLNLCASIRDRIAREIQNDPPLL--VNKGG- 424
Query: 598 DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGIT 655
+I+ G E+ R K+ L + + G+ +L+ + +V G
Sbjct: 425 ---------VIAEGVDRELDELRHIAFEGKDYLLKIQQRETELTGIPSLKISYNNVFGYY 475
Query: 656 HLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
+ KVP +W + + RY + E+ +++ A +++ ++ ++ +
Sbjct: 476 LEVRNTHKDKVPADWIRKQTLVNAERYITQELKEYEEKIMGAQDKILVLETKLYNELVLA 535
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
+ Q LA LDCL + A ++++ ++RPV DD + I GRHPV++
Sbjct: 536 LAEFTPAIQINANLLARLDCLLSFAQVAQDNRYIRPVIQDDD---VLDIKQGRHPVIEKE 592
Query: 776 LL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
L + ++ ND L E++ IITGPNM GKS +RQ ALI +MAQ+G FVPA SA +
Sbjct: 593 LPVGEQYIANDVYLDTEKQQIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIG 652
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
++D I+TR+GASD+I G STF+ E+NEA+ IL N +++SLV+ DELGRGTST+DG++IA
Sbjct: 653 LVDKIFTRVGASDNISMGESTFMVEMNEAANILNNISSRSLVLFDELGRGTSTYDGISIA 712
Query: 894 YATLDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
+A ++Y+ E+K K LF THY ++ +++ K V Y+VS + DQ
Sbjct: 713 WAIVEYIHENKKGKARTLFATHYHELNEME-KLYSRVKNYNVSV-----------REVDQ 760
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRS 1005
V +L K+ G SE SFG VA+LA +P S +SRA I +LE+ S V S
Sbjct: 761 KVIFLRKLERGGSEHSFGIHVAKLAGMPKSIVSRANTILKELESANSKDVMKNS 814
>gi|295105666|emb|CBL03210.1| DNA mismatch repair protein MutS [Faecalibacterium prausnitzii
SL3/3]
Length = 871
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 267/921 (28%), Positives = 427/921 (46%), Gaps = 130/921 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ QQ +E+K ++ D +L +G + F +DA A++ L G L
Sbjct: 5 SPMMQQYLEIKNQHKDEILFYRIGDFYEMFFDDAVTASRELDLTLTGKQCGLAERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P +V RL+ G+KV + +Q E P KA G R + + T T+
Sbjct: 65 VPFHSYEGYVARLIAKGYKVAICEQVE-------DPAKAKGLVKRDIIRVVTPGTV---- 113
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF--DVRLGVVAVEISTGDVVYGE 261
ES+ L DD RN + + G+ ++STG E
Sbjct: 114 ----------IESSML----QDD------RNNYIASLYLKGKKAGLCFADVSTGTAHITE 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ + L P+E+LL L E + AY + VE + + G
Sbjct: 154 LTADKIAPAVITELCRYHPSEVLLNPGLLDCRE--VTAYIKKNMSCSVELVEDERYAPGL 211
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN-MPDLAVQALALTIRHLK 380
+ +L E G D Q + +G R A+ ++ + D ++
Sbjct: 212 VAS---ALEEQFGRDW-----PQTTGMVAEGLVRFAMAALLEYLHDTQIK---------- 253
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
G+ER+ + + + + M LS T LE+ + GTLL +++ T T G
Sbjct: 254 --GVERL----KTVITYNEAQFMRLSPVTRANLELTETLRGREKRGTLLWVLDKTSTAMG 307
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R+LR W+ PL LI+ RL+AV E++ + D+T + +Y
Sbjct: 308 KRMLRSWIEQPLISSQLINHRLNAV-------------EALVRQTMVRGDLT---EELHY 351
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
I D++R +TR + +ATP E + Q +L L + E +
Sbjct: 352 I-----------ADMERLMTRTVYGSATPKEIYTLAQTC----DRLPGLR---KQAEGCS 393
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
L L AS + A++ + V+ EA L + +I+ G +EV R
Sbjct: 394 CPELAE-------LAASIDPLEDIKARIYAAVDPEAPST--LKDGGVIAKGYHAEVDELR 444
Query: 621 KAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKK 678
+ K L L R++ G+ L+ + IE+ ++K VP + + +
Sbjct: 445 SIRDNTKGVLAQLEARLRQETGIPKLKIGYNHVFGYFIEVSNSYKNLVPETYIRKQTLTS 504
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
RY + E+ ++ A+E L + R +D L+ G Q A+A LD L A
Sbjct: 505 GERYITQELKELESKILGAHERLISLERRLFDELLESIGAQLDRIQRTANAIAQLDVLAA 564
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQII 797
LA ++ N+ RPV VDD + + I GRHPV++ +L + FVPNDT L+ + C II
Sbjct: 565 LAQVAAENNYCRPV-VDDSDV--LTITEGRHPVVEQVLKGSMFVPNDTTLNCTTDRCLII 621
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS Y+RQ ALI +MAQ+GSFVPA+S + V+D I+TR+GASD + G+STF+
Sbjct: 622 TGPNMAGKSTYMRQNALIALMAQIGSFVPAASCHVGVVDAIFTRIGASDDLAAGQSTFMV 681
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK---CMVLFVTHY 914
E+ E + IL+N TA+SLV++DE+GRGTST DG++IA A ++++ + K C LF THY
Sbjct: 682 EMTEVAEILKNATAKSLVVLDEIGRGTSTFDGMSIARAVVEHIADPAKGLGCKTLFATHY 741
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ +++ G V Y+++ K +D+T+L ++V G ++ S+G +VA+
Sbjct: 742 HELTELEGTVEG-VKNYNIAV-----------KKRGEDITFLRRIVRGPADDSYGIEVAK 789
Query: 975 LAQLPPSCISRATVIAAKLEA 995
LA LP S RA + LEA
Sbjct: 790 LAGLPGSVTRRAHEVLRTLEA 810
>gi|344245100|gb|EGW01204.1| DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1260
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 261/972 (26%), Positives = 428/972 (44%), Gaps = 121/972 (12%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP ++ E+K++ D+++ +VG + + DA + LG+ + N+ + P
Sbjct: 307 TPGMRKWWEIKSQNFDLVIFYKVGKFYELYHMDAVIGVNELGL-VFMKGNWAHSGFPEIA 365
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAI---KAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
LV G+KV V+QTET + + F R + + + + G
Sbjct: 366 FGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREVCRIITKGTQTYG 425
Query: 207 GGE-DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
E D S YL+ + + + + G GV V+ S G G+F D
Sbjct: 426 VLEGDPSESNSRYLLSLKEKEED---------SSGHTRVYGVCFVDTSLGKFFIGQFPDD 476
Query: 266 FLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
S ++ P ++L + LS +T+ +L G S+ E I G
Sbjct: 477 RHCSRFRTLVAHYPPVQILFEKGNLSTETKTVL---KGSLSSCLQEG-----LIPGSQFW 528
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAI---EGIMNMP----DLAVQALALTIR 377
+ + E+ + + + V G +S + I P +LA+ AL +
Sbjct: 529 DATKTLRTLLEEGYFSGKSEGSGVVLPGVLKSMTSESDSIGLTPGEKSELALSALGGCVF 588
Query: 378 HLKQFGLERIMCLGASFRSL------------------SGSMEMTLSANTLQQLEVLRNN 419
+LK+ +++ + A+F + S M L A TL LE+ N
Sbjct: 589 YLKKCLIDQELLSMANFEEYFPLDSDKVTTVRPGAIFTTASQRMVLDAVTLNNLEIFLNG 648
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
+NGS GTLL ++ T +G RLL++W+ PLC + IS RLDAV ++
Sbjct: 649 TNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVGDLM---------- 698
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP--SEFIAVMQ 537
+K ++VT + L + PD++R +++I H +P S+ +
Sbjct: 699 ---ALPDKVNEVTDL--------------LKKLPDLERLLSKI-HNIGSPLKSQNHPDSR 740
Query: 538 AILYAGKQLQQLHI-------DG--------EYREKVTSKTLHSALLKRLILTASSPAVI 582
AI+Y + I +G E E V L + + L SP
Sbjct: 741 AIMYEETTYSKKKIIDFLSTLEGFKVVCKIIELMEGVADDFKSKTLRRVVTLQTKSPE-- 798
Query: 583 GKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCR 638
G+ L + +N+ ++ L+ G + +A ++ ++ L ++ R
Sbjct: 799 GRFPDLSAELNRWDTAFDHEKARKTGLITPKAGFDPDYDQALADIKENEQSLLEYLDKQR 858
Query: 639 KQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLA 695
++G R + + + + +E+P NF +P + ++ K RY + + L L
Sbjct: 859 SRIGCRTIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLSNLI 918
Query: 696 LANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVF 753
A E + + F Y ++Q+A++ +A LD L LA S+ + RPV
Sbjct: 919 NAEERRDMSLKDCMRRLFYNFAKNYKDWQSAIECIAVLDVLLCLANYSQGGDGPMCRPVI 978
Query: 754 V---DDHEPVQIHICSGRHP-VLDTILLDNFVPND-------TNLHAEREYCQIITGPNM 802
+ +D P + + RHP V T D+F+PND + YC ++TGPNM
Sbjct: 979 LLPGEDTHPF-LELKGSRHPCVTKTFFGDDFIPNDILIGCEEEGEENGKAYCVLVTGPNM 1037
Query: 803 GGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEA 862
GGKS IRQ L+ +MAQ+G +VPA L ++D ++TR+GASD I G STF EL+E
Sbjct: 1038 GGKSTLIRQAGLLAVMAQLGCYVPAEECRLTLVDRVFTRLGASDRIMSGESTFFVELSET 1097
Query: 863 SYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKT 922
+ ILR+ TA SLV+VDELGRGT+T DG AIA A + L E KC LF THY + + +
Sbjct: 1098 ASILRHATAHSLVLVDELGRGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYS 1157
Query: 923 KFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSC 982
K SV H++ + ++ P S + +T+LYK + G S+GF A+LA LP
Sbjct: 1158 KNV-SVRLGHMACMVENECEDP----SQETITFLYKFIQGACPKSYGFNAARLANLPEEV 1212
Query: 983 ISRATVIAAKLE 994
I + A + E
Sbjct: 1213 IRKGHRKAREFE 1224
>gi|429123686|ref|ZP_19184219.1| DNA mismatch repair protein MutS [Brachyspira hampsonii 30446]
gi|426280519|gb|EKV57533.1| DNA mismatch repair protein MutS [Brachyspira hampsonii 30446]
Length = 894
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 257/941 (27%), Positives = 451/941 (47%), Gaps = 132/941 (14%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S N+K TP+ +Q E+K KY D +L+ +G + F +DA++ + +LG+ N
Sbjct: 8 SDNKEENQKLTPMMRQYKEIKDKYNDSILLFRMGDFYEVFFDDAKVVSDILGLTLTKRAN 67
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKAT 198
A +P ++ ++ +LV +G K+ + Q E P A G R ++ + T T
Sbjct: 68 VPMAGVPYHAIDNYLSKLVKSGMKIAICDQME-------DPKTAKGIVKREVTQVITPGT 120
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ + + + NYL ++ V K + +ISTG++
Sbjct: 121 IAENKYLESKSN------NYLASII-----VSKSEKNA---------ALSICDISTGELY 160
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
E N L + EAV + + + TE+++ P + +E S I
Sbjct: 161 ASEINSN-LENQNEAV-----------KEIIDELTEEII--RFSPKEIMTIESVSESIII 206
Query: 319 GGGALAEVMSLYENMGEDTLSN-NEDQNMDVPEQGNHRSAIE----GIMNMPDLAVQALA 373
E+ S + ++ T N + + NH + GI P L + L
Sbjct: 207 -----KEIQSKFNSIFYSTTPNYTAEYSYAYKTLTNHFKTVSLKSFGIEEKP-LLISLLG 260
Query: 374 LTIRHLKQFG---LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
TI ++++ LE I + R S MTL T+ LE+L N + TL
Sbjct: 261 STIFYIQELSKTSLEHISNITLYNRKDS----MTLDYATIASLEILETIRNDNNKMTLFD 316
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
++ T T G+R L+R + PL + + I+ RLD V ++
Sbjct: 317 TIDRTKTSMGARYLKRIIVEPLLNIDDINKRLDNVEFFYKNQ------------------ 358
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL- 549
+F Y + +L +G DI+R +++ P E +++ + ++ + + + +L
Sbjct: 359 ------KFMYKIRDLLQDIG---DIERLASKLALSRINPKELVSLKRFLVTSLEVITELA 409
Query: 550 --HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+ + E+V + + L++R IL P ++ ++GD I
Sbjct: 410 MNNFEDVNFEEVNDIKIITDLIERAIL--EEPKIV--------------INEGD-----I 448
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK- 665
I + + + +A + + + L + + G+ NL+ + I + +E+ AN
Sbjct: 449 IKDDYDETLKKYNEARREGRSWIAELEHNYKLDTGINNLKIRYNNVIGYYVEVTKANASS 508
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP ++ K + + RY + +++ + ANE+ + + + Y
Sbjct: 509 VPSDFIKRQTLIGSERYTTSKLMEYETIINEANEKSYALEYDIFIDVRNKTNEYLNSILK 568
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPND 784
+ ++ +D ALA L++ N+V+P+ + I I GRHPV++ L ++F+PND
Sbjct: 569 MAKVISIIDVYSALACLAKEDNYVKPII---TDDGIIDIKEGRHPVVEVNLKTESFIPND 625
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T L ++ E+ IITGPNM GKS Y+RQ ALI ++AQ+GSFVPASSA++ ++D I+TR+GA
Sbjct: 626 TYLDSKNEHLLIITGPNMSGKSTYLRQTALIVLLAQIGSFVPASSAKISIVDRIFTRVGA 685
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL--E 902
SD+I +G STFL E+NE +YIL +CT +SLVI+DE+GRGTST+DG++IA+A ++YL+ E
Sbjct: 686 SDNIARGESTFLVEMNETAYILNHCTDKSLVIMDEIGRGTSTYDGLSIAWAIVEYLVHEE 745
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
+KK LF THY ++ ++ + + ++KV+ ++ D+ + ++ KV G
Sbjct: 746 NKKAKTLFATHYHELTMLE----------DLEGVKNYKVL--VEEYKDE-IIFMKKVTEG 792
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++SS+G A++A P I RA I KLEAE S +V+N
Sbjct: 793 AAQSSYGIYAAKIAGAPNKVIKRAGEILKKLEAEASIQVEN 833
>gi|392426160|ref|YP_006467154.1| DNA mismatch repair protein MutS [Desulfosporosinus acidiphilus
SJ4]
gi|391356123|gb|AFM41822.1| DNA mismatch repair protein MutS [Desulfosporosinus acidiphilus
SJ4]
Length = 850
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 269/924 (29%), Positives = 423/924 (45%), Gaps = 156/924 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +K K PD +L +G + FGEDAE+AA +L I A
Sbjct: 3 TPMMKQYQGIKAKVPDAILFYRLGDFYEMFGEDAELAAPILQIALTSRDAGEGKRIPMCG 62
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P ++ +LV+ G KV + +Q E P A G R + + + TL
Sbjct: 63 VPYHAAETYLIKLVSTGHKVAICEQVE-------DPKAAKGIVKRDIIRIVSPGTL---- 111
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
E ++YL V FD + G+ +++STG+
Sbjct: 112 ----TEFISERSNHYLASVF-----------------FDTQWGLSFLDLSTGEFTI---- 146
Query: 264 DGFLRSGLEAVLLSLS---PAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
F + E +L LS PAE+LL L K++ K+ + Y C+ RD
Sbjct: 147 --FQTAESEVLLAELSLIHPAEILLPPELMKKS-KLWVGYF---------CSIRD----- 189
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
S Y+ S DQ P Q S +E P A L
Sbjct: 190 ------RSSYQ-------SRVLDQRF--PGQA---SLLE---EFP-----VAASAAAALW 223
Query: 381 QFGLERIMCLGAS----FRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
++ LE + + S ++ M L T + LE+ + N GTLL +++ T
Sbjct: 224 EYVLETMPGVDPSHIVEIKTYRSEQRMFLDQWTRRNLELTESLRNQGRKGTLLSVLDMTQ 283
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G RLLR W+ PL I RL+ V E+ TS+S + D
Sbjct: 284 TALGGRLLRHWIDKPLLVEAEIEQRLNNVEEL--------TSDSFSRQD----------- 324
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
LS +L + D++R + R+ + TA + +++ Q L + E R
Sbjct: 325 -----LSKIL---AKVYDLERLMGRVSYGTANAKDLLSLAQT----------LALLPELR 366
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
E + + T S K +L P V KLL +N + L + II G EV
Sbjct: 367 EVLKASTAGSLKAKVPLLEGLDPLV----HKLLDALN--PSPPISLRDGNIIKTGYSQEV 420
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKVN 674
R KE + L N R++ G+R+L+ + IE+ +N + VP ++ +
Sbjct: 421 DELRSIATGGKEWVAKLENAERERTGIRSLKIGYTKVFGYYIEITHSNARLVPEDYIRKQ 480
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ R+ +PE+ ++ A E L + + + +E Y A +LA +D
Sbjct: 481 TLSNAERFVTPELKEYEQKILGAEERLKELEFELFQTLREEVRSYTQVILRAADSLAEID 540
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREY 793
+LA ++ K + RP D QI I GRHPV++ +L FVPNDT L + +
Sbjct: 541 VYVSLAEIAVRKRYTRPQITTDG---QISITEGRHPVVEDMLEAGVFVPNDTQLSFDH-H 596
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNM GKS Y+RQVALI +MA +GSFVPA A + ++D I+TR+GASD + G+S
Sbjct: 597 LAVITGPNMAGKSTYMRQVALIVLMAHIGSFVPAKQAAISLVDRIFTRVGASDDLAAGQS 656
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM--VLFV 911
TF+ E++E ++IL+ T +SL+I+DE+GRGT+T DG++IA+A +YL++H + LF
Sbjct: 657 TFMVEMHEVAHILKYATKKSLIILDEIGRGTATFDGLSIAWAVAEYLVQHPEFTPKTLFA 716
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ ++ F G + HV + +D+ +L+K++PG ++ S+G +
Sbjct: 717 THYHELTQLEDDFPG-LFNLHVGV-----------KERGEDIIFLHKILPGRADRSYGIQ 764
Query: 972 VAQLAQLPPSCISRATVIAAKLEA 995
VA+LA LP + RA + +LEA
Sbjct: 765 VARLAGLPHELLQRAKTLLLELEA 788
>gi|260893758|ref|YP_003239855.1| DNA mismatch repair protein MutS [Ammonifex degensii KC4]
gi|260865899|gb|ACX53005.1| DNA mismatch repair protein MutS [Ammonifex degensii KC4]
Length = 865
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 258/927 (27%), Positives = 424/927 (45%), Gaps = 138/927 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAHLDHNFM----TAS 144
TP+ QQ +E+K +YPD +L +G + F EDA AA +L + D +
Sbjct: 5 TPMMQQYLEIKKQYPDAILFFHLGDFYEMFFEDAVKAAPILEVALTSRDAGRLGRVPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ RLV+ GFKV + +Q E P +A G RG++ + T T
Sbjct: 65 VPCHSASSYIARLVSHGFKVALCEQLED-------PSQAKGLVKRGVTRVITPGTFFE-- 115
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
GE +Y+V V G G+ + E+ TG+ F
Sbjct: 116 ----GETADKTSHSYVVAVAPGSGKT---------------YGLASAEVGTGEFRVTSFT 156
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ L L L PAE++L P + K L+ A PA+ + ++ F
Sbjct: 157 GAGAQDKLMDELFRLQPAEVVL--PEGNEELKHLVRAAVPAAALTF--WPQELFRDLARA 212
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
+ YE GE A+ + + ++HLK+
Sbjct: 213 KAALEGYEREGE-----------------WETEAVLAAGVLAAYLAETQKRELKHLKKI- 254
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
+S+R M L A T + LE+ R+ ++GS GTLL ++++TLT G R
Sbjct: 255 --------SSYRPEGF---MLLDAATRRNLELTRSLADGSRRGTLLEVLDYTLTGMGGRR 303
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LR W+ PL D I RL+AV+ Y ++V + + +
Sbjct: 304 LRDWIEQPLLDPAAIEERLEAVA--------YLVEQAVEREE----------------IR 339
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH----IDGEYREKV 559
+ L +G DI+R +R+ A + +++ +++ AG+ ++L + G R+++
Sbjct: 340 ARLKKMG---DIERLASRLSFGLANARDLLSLKDSLILAGEIKERLSGAEGLLGRLRDQL 396
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
+ ++L+ I PA + + +I G EV R
Sbjct: 397 ENLDDIASLIAEAI-APDPPATLQEGG--------------------LIREGYHPEVDRL 435
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL--PANFKVPLNWAKVNSTK 677
R + A + L L +++ G+++L+ + IE+ P VP ++ + +
Sbjct: 436 RAIRRDAHKYLAELEAKEKERTGIKSLKIGYNRVFGYYIEVTKPNLHLVPPDYQRRQTLT 495
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
+ R+ +PE+ + + A E L + + + + A +A+ +D L
Sbjct: 496 QAERFITPELKEYEEMILGAEERLYSLEYELFCQVRDQVQAHLDRILRAARAIGQIDALA 555
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQI 796
+LA + N+VRP I I GRHPV++ L NFVPNDT L + I
Sbjct: 556 SLAVAALKGNYVRPRVSSSD---IIRIKEGRHPVVERALGPGNFVPNDTWLGGPDKRVAI 612
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNMGGKS Y+RQVALI +MAQ+GSFVPA+ AE+ V+D I+TR+GA+D++ G+STF+
Sbjct: 613 ITGPNMGGKSTYMRQVALIVLMAQIGSFVPAAEAEIGVVDRIFTRVGAADNLYGGQSTFM 672
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
E+ E IL T++SLV++DE+GRGTST+DG++IA A ++YL+ K LF THY +
Sbjct: 673 VEMGECRTILTQATSRSLVVMDEVGRGTSTYDGMSIARAIVEYLVHRIKAKTLFSTHYHE 732
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ D+ G ++++ + V++LY+V+PG ++ S+G VA LA
Sbjct: 733 LTDLAR----LPGVFNLTVAVREEA---------GRVSFLYRVLPGKADKSYGLHVAALA 779
Query: 977 QLPPSCISRATVIAAKLEAEVSSRVQN 1003
LP I RA I +LE +++
Sbjct: 780 GLPKEVIERAKEILEELERRQEKKLEK 806
>gi|268611650|ref|ZP_06145377.1| DNA mismatch repair protein MutS [Ruminococcus flavefaciens FD-1]
Length = 871
Score = 290 bits (741), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 251/942 (26%), Positives = 428/942 (45%), Gaps = 166/942 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K +P+ +Q +E+K KY D +L +G + F +DA +K L G L+
Sbjct: 7 KISPMMRQYLEMKDKYEDCVLFFRLGDFYEMFFDDAVRVSKALELTLTGRDCGLEERAPM 66
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQ-TETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
+P +++++RL++ GFKV V +Q T+ A K G R + + T TL
Sbjct: 67 CGVPYHAADMYIKRLIDLGFKVAVCEQLTDPAESK-------GIVIRDVIRVVTPGTL-- 117
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
D +D G +NY+ + D+ N V + +ISTG+
Sbjct: 118 -TDSSMLDD---GRNNYICSIYYDEENKS--------------CAVASADISTGEAALST 159
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA----SRDCF 317
F + +G+ L PAE++ + L +R+ECA ++CF
Sbjct: 160 FEGKDMEAGVINELSRCRPAEVIFTDSF------LSLKNVADFIKIRLECAVTLRDKECF 213
Query: 318 IGGGALAEVMSLY--ENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
+ VM ++ ++M E + + + G A+ G+ +
Sbjct: 214 MPSERRTAVMQVFGVKSMAE----------LGITDDGADCCAVCGLFDY----------- 252
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
I ++ + R L G M L N + LE+ N + G+LL +++ T
Sbjct: 253 INDTQKTTVSRF----TKIEILGGDAFMGLDLNARRNLELTETLRNKEKKGSLLWVLDST 308
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G RLL+ W+ PL I RLDAV + Y+ S +
Sbjct: 309 KTSMGRRLLKNWIEQPLKSPARIIERLDAVDAL------YKNSVT--------------- 347
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
L+ + L R D++R +T++ +++A P +
Sbjct: 348 ------LADLGDLLDRVYDLERLMTKVMYKSANPRDL----------------------- 378
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM--------- 606
+ +++ L L+K+ + S +KLL+ N+E +++ L+
Sbjct: 379 -KSLSATALQLPLIKQELSKLS-------GSKLLARCNEEIDTLEEMVKLVENAIMDEPP 430
Query: 607 -------IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIE 659
+I G E+ R + KE +D + ++ G++NL+ + +E
Sbjct: 431 VSVKDGGVIREGFNQELDELRHIMGHGKEMIDDIEQREKEATGIKNLKIGYNRVFGYYLE 490
Query: 660 LPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+ ++ +P W + + R+ + E+ A + + L ++ + A + +++F
Sbjct: 491 VTRSYYDLIPDGWIRKQTLANAERFITEELKNAENAI-LGAKDKALALEADIFAEVRDFL 549
Query: 718 GYYAE-FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL 776
E Q A+A +D L + A ++ +V+P D I I +GRHPV++ +L
Sbjct: 550 ATKLESVQKTASAVATVDVLCSFADVALRNQYVKPDIAIDG---AIDIKAGRHPVVELML 606
Query: 777 LDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
+ FVPND + + + IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA SA++ V+
Sbjct: 607 TEEMFVPNDIYIDNKADRMSIITGPNMSGKSTYMRQTALIVLMAQIGSFVPADSAKISVV 666
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D I+TR+GASD + G+STF+ E++E S IL+N T SLVI+DE+GRGTST DGV+IA A
Sbjct: 667 DKIFTRVGASDDLTAGQSTFMVEMSEVSDILKNATPDSLVILDEVGRGTSTFDGVSIARA 726
Query: 896 TLDYLLEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDV 953
++++ KK C LF THY ++ ++ + G V Y ++ +K ++
Sbjct: 727 VAEHIVNSKKLGCKTLFATHYHELIGLENELEG-VKNYSIAV-----------NKHGGNI 774
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
+L K+V G + S+G VA+LA LP +SRA + A++EA
Sbjct: 775 RFLRKIVRGGVDESYGIDVAKLAGLPAKVVSRARELLAEMEA 816
>gi|440636963|gb|ELR06882.1| hypothetical protein GMDG_08173 [Geomyces destructans 20631-21]
Length = 1123
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 266/981 (27%), Positives = 427/981 (43%), Gaps = 121/981 (12%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P P T+ IP P++ T ++ E+Q ++K K+ + ++ + G + + D
Sbjct: 208 PDHPDYDPRTVY-IP-PNAWTG----FSAFEKQYWQIKQKFWNTIVFFKKGKFYELYEND 261
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK------ 176
A + ++ + N +P L+ + V G+K+ V Q E+A K
Sbjct: 262 ATIGHQLFDLKLTDRVNMRMVGVPESSLDHWANQFVAKGYKIARVDQMESALGKEMRERE 321
Query: 177 -AHGPGKAGPFG----RGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGK 231
+ G KA R L+ + TK TL G G + Y V + +
Sbjct: 322 DSVGGAKAKKVDKIIHRELACVLTKGTLVE------GSMLEGDMATYCVAIKETTMTADD 375
Query: 232 IRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LS 290
+ G+ V+ +TG EF D + E + P ELLL + +S
Sbjct: 376 LPT----------FGIAFVDTATGQFFLSEFVDDVDLTKFETFVAQTRPQELLLEKSCIS 425
Query: 291 KQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE 350
+ ++L + P + ++ F G A+V + L+ + + P
Sbjct: 426 VKALRILKSNTSPTTIWNYLKTGKE-FWG----ADVTKRELDCSGYFLTKEPGADEEWPA 480
Query: 351 QGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLS---GSMEMTLSA 407
E IM+ A +++L+ L+R + +F S S + L
Sbjct: 481 TLMEAKDKEIIMS-------AFGALVQYLRSLKLDRDLLSQRNFAWYSPIQKSTTLVLDG 533
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
TL LE+ N + + GTL ++N +T +G R+ R+WV HPL D I+ RLDAV
Sbjct: 534 QTLINLEIFANTYDSGQAGTLFKMLNRCITPFGKRMFRQWVCHPLADAKKINERLDAV-- 591
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
D N+D T+ E QF + R PD++R I+RI
Sbjct: 592 -----------------DMLNADSTLRE-QF-------TGQMTRMPDLERLISRIHAGVC 626
Query: 528 TPSEFIAVMQAILYAGKQLQ-QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
P +F+ V++ +Q++ + I G + ++ RLI + P ++G
Sbjct: 627 RPDDFVRVLEGF----EQIEYTMSILGAFGG-------GDGIIDRLI--SGMPDLVGPLE 673
Query: 587 KLLSTVNK-EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
+ ++ +A D+ L++ G + + + K+EL L +LG +
Sbjct: 674 YWKTAFDRTKARDE----RLLVPERGIEEDFDDSEDRILGIKQELFGLKKEWAAKLGTKG 729
Query: 646 LEFMSVSGITHLIELPA-NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
++F V + +E+P N K VP +W V+STK RY+ PE+ T + L A E
Sbjct: 730 VQFKDVGKEIYQLEVPVKNSKAVPKDWTMVSSTKSEKRYYFPELKTLVRALQEAQETHGQ 789
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQ 761
+ +A F + F Y + AV +A LDCL +LA S RP FVD +
Sbjct: 790 IVKATAGRFFQRFDKGYTTWLTAVNIIAQLDCLISLARASAGLGSPSCRPTFVDTERTI- 848
Query: 762 IHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQV 821
+ RHP + + D F+PN L ++TG N GKS +R + IMAQ+
Sbjct: 849 VDFTELRHPCVLPNVTD-FIPNSIRLGGAEPNINLLTGANAAGKSTILRMTCIAAIMAQI 907
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
G +VPA SA L +D I +R+GA+D+I +STF EL+E IL T +SLVI+DELG
Sbjct: 908 GCYVPAESATLTPIDRIMSRLGANDNIFAAQSTFFLELSETKKILAEATPRSLVILDELG 967
Query: 882 RGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV 941
RGTS++DGVA+A A L ++ H + F THY +A +F G H
Sbjct: 968 RGTSSYDGVAVAQAVLHHVATHVGAIGFFATHYHSLA---AEFAG------------HPE 1012
Query: 942 MGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ P ++++ VT+LY++ GV++ SFG A + +P + RA V A + E
Sbjct: 1013 IAPRRMAINVDEAERRVTFLYRLEEGVAQGSFGMHCASMCGIPRKVVERAEVAAKEWEHT 1072
Query: 997 VSSRVQNRSAKRDLLVKLSDQ 1017
V AKR V L Q
Sbjct: 1073 SRLTVGLEVAKRGTYVPLGWQ 1093
>gi|255655930|ref|ZP_05401339.1| DNA mismatch repair protein [Clostridium difficile QCD-23m63]
gi|296450648|ref|ZP_06892401.1| DNA mismatch repair protein MutS [Clostridium difficile NAP08]
gi|296879235|ref|ZP_06903230.1| DNA mismatch repair protein MutS [Clostridium difficile NAP07]
gi|296260492|gb|EFH07334.1| DNA mismatch repair protein MutS [Clostridium difficile NAP08]
gi|296429778|gb|EFH15630.1| DNA mismatch repair protein MutS [Clostridium difficile NAP07]
Length = 947
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 258/935 (27%), Positives = 437/935 (46%), Gaps = 166/935 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q +E+K +Y D +L +G + F EDA +A+K L G L+
Sbjct: 7 KLTPMMKQYLEVKNRYKDCILFFRLGDFYEMFFEDALVASKALEIALTGKACGLEERAPM 66
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P N ++ +LV G+KV + +Q E P A G R + + T T
Sbjct: 67 CGVPFHSANSYISKLVENGYKVAIGEQME-------DPSTAKGIVRREVIRVITPGT--- 116
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V G ++NYL+ + D N+ G+ V+ISTG+
Sbjct: 117 ---VLDGNLLENKKNNYLLSLYKDGTNI----------------GLTYVDISTGETNATC 157
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N+ + +E + + P E+++ EK L SN+ + + D ++
Sbjct: 158 LNEDKV---IEEIA-KIHPTEIIINDL--DFIEK--LRDIATVSNIYINESFSDNYLDIN 209
Query: 322 ALAEVM-SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
L E +Y Q + ++G +S++ ++N + + I ++
Sbjct: 210 ILKEYFPDVYL------------QKLKFDDKGLIKSSLSILLNYIYNTQKQITSNINNIN 257
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ M L R+ ++E+T + +R N G+LLH+++ T T G
Sbjct: 258 IYNSSEYMVLDMFTRT---NLELT---------QTIRGNKKK---GSLLHVLDKTSTAMG 302
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLR++V PL +++ I RLD + EI + +
Sbjct: 303 GRLLRKYVEEPLINKSKIENRLDVIEEIKDD----------------------------F 334
Query: 501 ILSSVLTSLGRSP-DIQRGITRIFHRTATPSEFIAVMQAI-----LYAGKQLQQLHIDGE 554
IL L + ++ DI+R +I TP E I + +I L L I E
Sbjct: 335 ILREDLNDILKNIYDIERICGKIAFERVTPKELIHLKNSIEKLPNLKDTINLSNAKILKE 394
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
Y + L+ IL P + K ++ + FS
Sbjct: 395 YVSGMDKLDDIYNLIDEAIL--EEPTITIKDGNIIKS--------------------DFS 432
Query: 615 -EVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFKVPLNW 670
E+ R+ ++ + + N R++ G+++L+ F V G + IE+ ANFK
Sbjct: 433 DELKELREISKNGAFLVKEIENREREKTGVKSLKIGFNKVFG--YYIEITKANFK----Q 486
Query: 671 AKVNST---KKTI----RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
AK++ T K+T+ RY +PE+ +++ A E++ ++ F++ Y
Sbjct: 487 AKLDETYIRKQTLSNAERYITPELKEIEEKILHAEEKIK---SLEYEIFVEIRDTIYKNI 543
Query: 724 ---QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDN 779
Q + +A +D +LAT++ N+V+P +E ++ I +GRHPV++ I+ +N
Sbjct: 544 DRIQKVAKTIANIDVFVSLATVAHINNYVKPAI---NENNKLDIRNGRHPVVENIVGEEN 600
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
FVPNDT L+ IITGPNM GKS Y+RQ A+I +MA +GSFVPA A++ +LD I+
Sbjct: 601 FVPNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAEYADIPILDRIF 660
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR+GASD + QG+STF+ E+NE S IL+N T +SLVI+DE+GRGTST+DG+++A++ ++Y
Sbjct: 661 TRVGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTSTYDGISLAWSIVEY 720
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
+ ++ +C LF THY ++ D++ +F V Y ++ + + + +L K+
Sbjct: 721 IQKNIRCKTLFATHYHELTDLEEEFK-EVKNYSIAV-----------KEDGEGIIFLRKI 768
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+P ++ S+G VA+LA+LP I RA I LE
Sbjct: 769 IPQGADKSYGIYVAKLAKLPDEVIERAKYILKDLE 803
>gi|357043367|ref|ZP_09105062.1| DNA mismatch repair protein mutS [Prevotella histicola F0411]
gi|355368541|gb|EHG15958.1| DNA mismatch repair protein mutS [Prevotella histicola F0411]
Length = 886
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 263/936 (28%), Positives = 437/936 (46%), Gaps = 146/936 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------ 139
+K TP+ +Q +K ++PD L++ G + + EDA AA++LGI +N
Sbjct: 5 DKGMTPMMKQFFSMKAQHPDALMLFRCGDFYETYAEDAIEAARILGITLTRRNNGGNSGS 64
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 65 TEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREAIKGKKGLTAMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + +++V + E+N+L V G G V ++I
Sbjct: 125 LVTPG-VALSDNVLNYK-----ENNFLAAVHFSKGACG----------------VSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE + ++ E +L + P E+L + + E+ Y G R+
Sbjct: 163 STGEFLTGEGSFDYV----EKLLGNFQPKEVLYDRARKQDFER----YFGS----RLCTF 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D ++ A L ++ G L + V N A IM Q L
Sbjct: 211 EMDDWVFTDQTAR-QKLLKHFGTKNL-----KGFGVDHLLNGVIAAGAIM-------QYL 257
Query: 373 ALT----IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGT 427
LT I H+ S + + + T++ LE++ N +GS +
Sbjct: 258 ELTQHTHINHI------------TSLARIEEDKYVRMDRFTIRSLELIAPMNEDGS---S 302
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL+++++T T G RLLRRW+ PL D I+ RLD V
Sbjct: 303 LLNVIDNTATPMGGRLLRRWMVFPLKDAKPINERLDVV---------------------- 340
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
D EP F + +G D++R I+++ +P E + + A+ K +Q
Sbjct: 341 --DYFFREPDFREAIDEQFHRIG---DLERIISKVAVGRVSPREVVQLKNAL----KAIQ 391
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTAS-SPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
+ K S LKR+ + ++ + K + + ++GD
Sbjct: 392 PV--------KTACLYAKSEPLKRIGEQLNLCESLRDRIEKEIQPDPPQLVNKGD----- 438
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK- 665
+I++G E+ R + K+ L + +Q G+ +L+ + + +E+ FK
Sbjct: 439 VIASGYNKELDELRSIRDNGKQYLLEIQEKEVEQTGITSLKIGFNNVFGYYLEVRNTFKD 498
Query: 666 -VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP +W + + + RY +PE+ +++ A+E++ + + +++ + + Q
Sbjct: 499 RVPEDWIRKQTLAQAERYITPELKEYEEKILGADEKILAMEGQLFMELIQDMQEFIPQIQ 558
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVP 782
+A LDCL + +S+ ++VRPV VDD E + I GRH V++T L + +VP
Sbjct: 559 INANLIAHLDCLLSFMKVSQQHHYVRPV-VDDSEVIDIK--QGRHAVIETQLPIGEQYVP 615
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND L E++ +ITGPNM GKS +RQ ALI ++AQ+G FVPA A + ++D I+TR+
Sbjct: 616 NDVLLDTEKQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRV 675
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD+I G STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA+A ++YL E
Sbjct: 676 GASDNISLGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHE 735
Query: 903 HKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
H + LF THY ++ +++ F + Y+VS + + + +L K+
Sbjct: 736 HPRAQARTLFATHYHELNEMEKNFP-RIKNYNVSV-----------KEVEGKIIFLRKLE 783
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G SE SFG VA++A +P S + RA VI +LEA+
Sbjct: 784 QGGSEHSFGIHVAEIAGMPRSIVKRANVILKELEAD 819
>gi|397904383|ref|ZP_10505299.1| DNA mismatch repair protein MutS [Caloramator australicus RC3]
gi|397162603|emb|CCJ32633.1| DNA mismatch repair protein MutS [Caloramator australicus RC3]
Length = 858
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 257/941 (27%), Positives = 440/941 (46%), Gaps = 155/941 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +E+K ++ D +L +G + F EDAE+A++ L I LD
Sbjct: 4 TPMMQQYLEIKEQHKDCILFFRLGDFYEMFFEDAEIASRELEIALTGRDCGLDKRAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +L+ G+KV + +Q E + G R ++ + T T
Sbjct: 64 VPYHSAESYIAKLIEKGYKVAICEQVEDPKLAK------GIVKREITRIITPGT------ 111
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ G +NY++C+ + +LG+ ++STGD F++
Sbjct: 112 IIEGSMLNEKANNYIICIYNSTS----------------KLGLAICDVSTGDFFVTSFDN 155
Query: 265 GFLRSGLEAVLLSLSPAELLL--GQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
++ L L +P+ELL+ +P S E++ + R C
Sbjct: 156 E--KNKLIDELSKYAPSELLIIEEKPNSTINEQLEIIKG------RYNC----------- 196
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
L + Y+N+ D L + N + E SA + + D +L I +K++
Sbjct: 197 LISQIEKYDNL--DILDKFKTDNFNGEE---IISAATLLKYLTDTQKSSLG-HITSIKKY 250
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
+ M L + R ++E+T E LR S GTL+ +++ TLT G R
Sbjct: 251 NISDFMILDSFTRK---NLELT---------ETLRTRSKK---GTLIDVLDKTLTAMGGR 295
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LLR+W+ PL + I+ RL+AV E +++ YI
Sbjct: 296 LLRKWIEEPLMNIKEINKRLEAVEEFIDNI---------------------------YIS 328
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
S + L DI+R +++I +A + A+ Q+I L + K K
Sbjct: 329 SDLREFLRNIYDIERILSKISCESANARDLNALKQSI----SMLPDI--------KAALK 376
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVAR 618
S L++ + + + L++ E + +G II +G EV +
Sbjct: 377 ECRSDLIREI---ENDFDTLDDIYNLINAAIIENPPVSVKEGG-----IIKSGYNQEVDK 428
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLN-WAKVNS 675
R A+ + K + L +++ G+++L+ + IE+ AN +P + + + +
Sbjct: 429 LRDAMLNGKNWIAELEQREKEETGIKSLKVGYNKVFGYYIEITKANLSLIPKDRYIRKQT 488
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE---FQAAVQALAA 732
R+ +PE L +++ L E + + ++ F+ Y++ + Q LA
Sbjct: 489 LANAERFITPE-LKEIEENILGAE--SKIVELEYELFVDVRNKVYSQVERIKKIAQYLAI 545
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAERE 792
+D L + A +S N+V+P +D I I GRHPV++ ++ FVPNDT L +
Sbjct: 546 IDVLLSFARVSFENNYVKPEITNDG---IIEIIDGRHPVVEKVISSPFVPNDTILDNKEN 602
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS Y+RQVALI +++QVG FVPA A++ ++D I+TR+GASD + G+
Sbjct: 603 MIIIITGPNMAGKSTYLRQVALITLLSQVGCFVPAKKAKISIVDRIFTRIGASDDLSLGQ 662
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF+ E+ E S IL+N T SL+I+DE+GRGTST+DG++IA++ ++Y+ + LF T
Sbjct: 663 STFMVEMTEVSNILKNATKNSLIILDEVGRGTSTYDGLSIAWSVIEYINKSIGAKTLFAT 722
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ +++ K G V Y +S + H D+ +L K+V G ++ S+G +V
Sbjct: 723 HYHELTELEGKIKG-VKNYCIS-VKEH----------GDDIIFLRKIVRGGADQSYGIQV 770
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVK 1013
A+LA LP I +A I AKLE +++ K+D ++K
Sbjct: 771 AKLAGLPDEVIKKAKEILAKLEENDINKI-----KKDEVIK 806
>gi|1588283|prf||2208298A MSH6 gene
Length = 1242
Score = 289 bits (740), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 266/1035 (25%), Positives = 445/1035 (42%), Gaps = 161/1035 (15%)
Query: 7 QVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKKP 66
Q SR + P +Q +A+S +S + + V A+R+ PK+ P
Sbjct: 247 QAPSRSYNPSHSQPSATSKSSKFNKQNE---ERYQWLVDERDAQRR-------PKS--DP 294
Query: 67 KLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMA 126
+ P TL IP+ + K+TP E+Q E+K+K D ++ + G +F + +DA +A
Sbjct: 295 EYDPRTLY-IPSSAWN-----KFTPFEKQYWEIKSKMWDCIVFFKKGKEFELYEKDALLA 348
Query: 127 AKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
+ L I N A IP + + G+KV V Q E+ K G G
Sbjct: 349 NALFDLKIAGGGRANMQLAGIPEMSFEYWAAQFIQMGYKVAKVDQRESMLAKEMREGSKG 408
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN------------VGKI 232
R L + T TL G+ + + + + ++ GN V K+
Sbjct: 409 IVKRELQCILTSGTL------TDGDMLHSDLATFCLAIREEPGNFYNETQLDSSTIVQKL 462
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSK 291
+FG F ++ +TG++ EF D + L+ ++ + P E+++ + LS
Sbjct: 463 NTKIFGAAF--------IDTATGELQMLEFEDDSECTKLDTLMSQVRPMEVVMERNNLST 514
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPE- 350
K++ + P + A + + AE++S E+ S ED PE
Sbjct: 515 LANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEIIS------EEYFSTEEDW----PEV 564
Query: 351 --------QGNHRSAIEGIMNMPDLAVQALAL-TIRHLKQFGLERIMCLGASFRSLSGSM 401
+ SA G++ L +++++K++ +
Sbjct: 565 LKSYYDTGKKVGFSAFGGLLYYLKWLKLDKNLISMKNIKEYDF------------VKSQH 612
Query: 402 EMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISAR 461
M L TLQ LE+ N+ +GS+ GTL + N +T G R++++W+ HPL +N I +R
Sbjct: 613 SMVLDGITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGKRMMKKWLMHPLLRKNDIESR 672
Query: 462 LDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITR 521
LD+V + + D+T+ E + + + PD++R + R
Sbjct: 673 LDSVDSLLQ-------------------DITLRE--------QLEITFSKLPDLERMLAR 705
Query: 522 IFHRTATPSEF---IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASS 578
I RT +F I + I+ L+ + G+ + + +S
Sbjct: 706 IHSRTIKVKDFEKVITAFETIIELQDSLKNNDLKGDVSKYI----------------SSF 749
Query: 579 PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCR 638
P + +A K S N + N+++ G E ++ +Q ++EL ++ R
Sbjct: 750 PEGLVEAVK--SWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELMEILMTYR 807
Query: 639 KQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLAL 696
KQ N+++ + IE+P A VP NW ++ + K RY+S EV +A
Sbjct: 808 KQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEVRALARSMAE 867
Query: 697 ANEELTIVCRAAWDSFLKEFGGYYAE-FQAAVQALAALDCLHALATLSR--NKNFVRPVF 753
A E + + ++F +Y + +QA++ +DCL A+ S RP
Sbjct: 868 AKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYLGAPSCRPTI 927
Query: 754 VDDHEPVQ-------IHICSGRHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGG 804
VD+ + + S RHP L +F+PND L E+ ++TG N G
Sbjct: 928 VDEVDSKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKEQPRLGLLTGANAAG 987
Query: 805 KSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASY 864
KS +R + IMAQ+G +VP SA L +D I TR+GA+D+I QG+STF EL E
Sbjct: 988 KSTILRMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKSTFFVELAETKK 1047
Query: 865 ILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF 924
IL T +SL++VDELGRG S+ DG AIA + L ++ H + + F THY +A
Sbjct: 1048 ILDMATNRSLLVVDELGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLA------ 1101
Query: 925 TGSVGTYHVSYLTSHKVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLP 979
S H + P+ ++ ++VT+LYK++ G SE SFG VA + +
Sbjct: 1102 ---------SSFKHHPQVRPLKMSILVDEATRNVTFLYKMLEGQSEGSFGMHVASMCGIS 1152
Query: 980 PSCISRATVIAAKLE 994
I A + A LE
Sbjct: 1153 KEIIDNAQIAADNLE 1167
>gi|121533677|ref|ZP_01665504.1| DNA mismatch repair protein MutS [Thermosinus carboxydivorans Nor1]
gi|121307668|gb|EAX48583.1| DNA mismatch repair protein MutS [Thermosinus carboxydivorans Nor1]
Length = 861
Score = 289 bits (739), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 260/921 (28%), Positives = 430/921 (46%), Gaps = 140/921 (15%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
YTP+ +Q E+K ++ D +L +G + F EDAE+AA+ L I
Sbjct: 5 YTPMIEQYREIKRQHADKILFFRLGDFYEMFFEDAEIAARELEITLTGRDGGAGRRVPMC 64
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAA 202
+P + ++ RL+N G+KV + +Q E P +A G R + + T T+
Sbjct: 65 GVPFHAADTYIARLINKGYKVAICEQVE-------DPKQAKGIVRREVIKIITPGTV--L 115
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
DV + +NYLV V+ + ++ + + +ISTG+ + +F
Sbjct: 116 SDVLLPDKS----NNYLV-VIHEQNDI---------------ITMAGADISTGECYWADF 155
Query: 263 NDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ + L L LSPAE++L G K+T LA C I
Sbjct: 156 AGPYRLNTLCDHLYRLSPAEIVLTGLLTDKETLDTFLA-----------NRLHGCTITNL 204
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVP-EQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A+ E++ + E P E+ H A + ++ Q L + H+
Sbjct: 205 AI-----------ENSETTQELLQHHFPDEELPHSGAAIAVGHLLYYLHQTLKTDLSHVN 253
Query: 381 QFGLERIMCLGAS-FRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
R+M A+ F MT+ L+ LE+ RN +G TLL I++ T T
Sbjct: 254 -----RLMRYNAAEF--------MTIDTAALRNLEITRNLRDGGRKDTLLSILDFTQTAM 300
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G RLL++W+ +PL + I R DAV E+ + P
Sbjct: 301 GGRLLKKWLEYPLLSVHEIIRRQDAVDEL------------------------LTNPGVR 336
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
+L LG D++R +TR TA + IA+ Q++ + +LH+
Sbjct: 337 QVLQE---KLGHIYDLERIVTRAEVGTANGRDLIALKQSL--SSLPTIKLHV-------- 383
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIISNGQFSEVA 617
+++ SALL + A + +++ +++ D + + II G E+
Sbjct: 384 --QSMQSALLGEI------GAKMETYEDIVALIDRAIVDNPPHSVRDGGIIKTGYNQELD 435
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-AN-FKVPLNWAKVNS 675
R+ Q +++ L + +++ G+++L+ + IE+ AN VP + + +
Sbjct: 436 ELREIAQDSQQWLMAFEAREKERTGIKSLKVGYNKVFGYYIEVTNANRAAVPSEYIRKQT 495
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE-FGGYYAEFQAAVQALAALD 734
RY +PE L + L +E + + +++ + Q + LA +D
Sbjct: 496 LTSAERYITPE-LKEFETKVLGAQEKIVQLEYYLFTIVRDCVKKHIPRLQETARQLAVID 554
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREY 793
CL +L+ + N+ RP ++ E I I GRHPV++ +L + FVPNDT L+
Sbjct: 555 CLVSLSEAAARYNYRRPAITNNRE---IIIRDGRHPVVERLLDREVFVPNDTELNHHDCE 611
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS Y+RQVAL+ +MAQVGSF+PA A + +D I+TR+GASD + G+S
Sbjct: 612 VMIITGPNMAGKSTYMRQVALLVLMAQVGSFIPAREAAITPVDRIFTRVGASDDLATGQS 671
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+NE ++IL++ T SLVI+DE+GRGTST DG++IA A ++Y+ + K LF TH
Sbjct: 672 TFMVEMNEVAHILKHATTNSLVILDEIGRGTSTFDGMSIARAVIEYIKDRIKAKTLFATH 731
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ ++ + G + + V+ + +V +L ++VPG ++ S+G VA
Sbjct: 732 YHELTELAEQKKG-IKNFTVAV-----------KERGSEVVFLRRIVPGGADKSYGIHVA 779
Query: 974 QLAQLPPSCISRATVIAAKLE 994
+LA LP I RA I A+LE
Sbjct: 780 RLAGLPKKVIERAQTILAELE 800
>gi|373501469|ref|ZP_09591823.1| DNA mismatch repair protein mutS [Prevotella micans F0438]
gi|371948285|gb|EHO66166.1| DNA mismatch repair protein mutS [Prevotella micans F0438]
Length = 888
Score = 289 bits (739), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 266/948 (28%), Positives = 443/948 (46%), Gaps = 169/948 (17%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT---- 142
K TP+ +Q +K K+PD LL+ G + + +DA +K+LGI +N
Sbjct: 6 KGLTPMMKQFFSMKAKHPDALLLFRCGDFYETYCDDAIETSKILGITLTKRNNGAASGDE 65
Query: 143 -ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSALY 194
A P L+ ++ +LV AG +V + Q E K GK G RG++ L
Sbjct: 66 MAGFPHHALDTYLPKLVRAGKRVAICDQLEDPKKKREEIKGKRGLTAMDKMVKRGITELV 125
Query: 195 TKATLEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T V G++ E+N+L V FG G GV ++IS
Sbjct: 126 TPG-------VAMGDNVLNYKENNFLAAVH-------------FGKG---ACGVSFLDIS 162
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
TG+ + GE + ++ E ++ + +P E+L +++ ++ L Y G S
Sbjct: 163 TGEFLTGEGSFDYV----EKLIGNFAPKEVLY----NRERKQDFLKYFG----------S 204
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA 373
R C L E + + + L + + +N+ +G + + +Q L
Sbjct: 205 RICTF---ELDEWVFTEQTARQKLLKHFKTKNL----KGFGTDHLHNGIVAAGAIMQYLE 257
Query: 374 LT----IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
+T I H+ S + + L T++ LE++ + E +LL
Sbjct: 258 ITQHTNISHI------------TSLARIEEEKYVRLDRFTIRSLELVAPMHD--EGTSLL 303
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
++++ T+T G R+LRRW+ PL D I+ RLD V
Sbjct: 304 NVLDRTVTPMGGRMLRRWMVFPLKDVKTINERLDVV------------------------ 339
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
D EP F + +G D++R I+R+ +P E + + A++ LQ +
Sbjct: 340 DYFFREPDFRICVDEQFHRVG---DLERIISRVAAGRVSPREVVQLKNALM----ALQPV 392
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ---------- 599
K + ++ +LKR IG+ L ++ + ++
Sbjct: 393 --------KSACSSTNNEVLKR----------IGEQINLCESLRERIENEIHPDPPQLVA 434
Query: 600 -GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITH 656
GD +I++G SE+ R K+ L + +Q G+ +L+ F +V G +
Sbjct: 435 KGD-----VIADGFNSELDELRAIRTGGKQYLIEIQQKEIEQTGITSLKVGFNNVFG--Y 487
Query: 657 LIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
+E+ F KVP +W + + + RY +PE+ ++ A+E++ + + ++
Sbjct: 488 YLEVRNTFRNKVPADWIRKQTLAQAERYITPELKEYEAKILGADEKILALEAKLFAELVQ 547
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
+ + + Q +A +DCL + A + + +VRPV D E V I I GRHPV++T
Sbjct: 548 DMQTFIPQIQINANLIAHVDCLLSFAKTAEAQRYVRPVI--DEENV-IDIRQGRHPVIET 604
Query: 775 ILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
L + +VPND L +E + IITGPNM GKS +RQ ALI ++AQ GSFVPA SA +
Sbjct: 605 QLPIGEQYVPNDVLLDSEHQQIMIITGPNMAGKSALLRQTALIVLLAQAGSFVPAESARI 664
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
++D I+TR+GASD+I G STF+ E+ EA+ IL N T +SLV+ DELGRGTST+DG++I
Sbjct: 665 GLVDKIFTRVGASDNISLGESTFMVEMTEAANILNNVTPRSLVLFDELGRGTSTYDGISI 724
Query: 893 AYATLDYLLEH--KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
A+A +++L E + LF THY ++ +++ F + Y+V+ + +
Sbjct: 725 AWAIVEHLHEQPRARARTLFATHYHELNEMEKIFK-RIRNYNVAV-----------QEQN 772
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
V ++ K+ G SE SFG VA++A +PPS + RA V+ +LEA+ S
Sbjct: 773 GRVIFIRKLQRGGSEHSFGIHVAEIAGMPPSIVKRAGVVLRELEADNS 820
>gi|291522251|emb|CBK80544.1| DNA mismatch repair protein MutS [Coprococcus catus GD/7]
Length = 882
Score = 289 bits (739), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 261/957 (27%), Positives = 446/957 (46%), Gaps = 165/957 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ QQ + +K +Y D +L +G + F +DA A++ L G +
Sbjct: 5 TPMMQQYMAIKEQYKDCILFYRLGDFYEMFYDDALTASRELEITLTGKNCGQEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P ++V++ +LV G+KV + +Q A P +A G R + + T T + +
Sbjct: 65 VPYHAVDVYLNKLVAKGYKVAICEQ-------AEDPKQAKGIVKREVIRIVTPGTNLSQQ 117
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ G + NYL+C+V D+ + G+ +ISTGD E
Sbjct: 118 ALDEGRN------NYLMCLVYDNN----------------QFGLAITDISTGDFYTTEV- 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS------NVRVECASRDCF 317
L+ L + SP+E++ Y AS + V ++ D +
Sbjct: 155 -ATLKE-LYDEIHRFSPSEIICNDSF----------YMSGASLDDFKDRLHVSVSTLDTW 202
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD--LAVQALALT 375
A++ V + E+ +L G+ + P LAV AL L
Sbjct: 203 YMDEAVS-VQKIKEHFKVASLDG------------------LGLTDFPSGTLAVGALLLY 243
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
+ ++ L+ + + +RS G M + + T + LE++ + G+LL +++ T
Sbjct: 244 LYETQKNTLDNLTKI-TPYRS--GGY-MIIDSATNRNLELIETLREKQKKGSLLWVLDKT 299
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G+RL+R W+ PL ++ I+AR DAV E+ M T E + ++
Sbjct: 300 KTAMGARLMRNWIEQPLIEKKKITARQDAVEELYNDM---ITREEIREY----------- 345
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---------MQAILYAGKQL 546
L++V D++R +TRI +RTA P + IA ++ +L K
Sbjct: 346 ------LNAVY-------DLERLVTRISYRTANPRDLIAFKTSLGMIPPVKQLLSQAKSA 392
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
+ ID E++ L+++ I P +I +
Sbjct: 393 ELKEID----ERMDCLEDIYDLIEKSI-QDEPPIMIREGG-------------------- 427
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK- 665
+I G +V + R + K L L +++ G++NL + +E+ ++K
Sbjct: 428 MIKEGYNEDVDKFRLSRTEGKTWLAELEAREKEKTGIKNLRVRYNKVFGYYLEVTNSYKE 487
Query: 666 -VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP +W + + RY +PE+ D + A ++L + + G Q
Sbjct: 488 LVPEDWTRKQTLANAERYITPELKELEDMILGAEDKLAALEYDLYCEVRDSIGEQVVRIQ 547
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPN 783
+A+A LD L +LA ++++ ++VRP + I I GRHPV++ + + F+ N
Sbjct: 548 ETAKAIAHLDVLASLACVAQSNDYVRPSI---NTKGVIDIQGGRHPVVEKMNNNQMFIDN 604
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT L + IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA SA + ++D I+TR+G
Sbjct: 605 DTYLDNKNHRISIITGPNMAGKSTYMRQSALIVLMAQIGSFVPAKSANIGIVDRIFTRVG 664
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASD + G+STF+ E+ E + ILRN T++SL+I+DE+GRGTST DG++IA+A ++++
Sbjct: 665 ASDDLASGQSTFMVEMTEVANILRNATSRSLLILDEIGRGTSTFDGLSIAWAVVEHISNP 724
Query: 904 K--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
K LF THY ++ +++ K SV Y ++ + D+ +L K++
Sbjct: 725 KLLGAKTLFATHYHELTELEGKL-DSVNNYCIAV-----------REQGDDIIFLRKIIR 772
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQN----RSAKRDLLVK 1013
G ++ S+G +VA+LA +P S I RA IA+ L E +V+ + +N SAK+ +V+
Sbjct: 773 GGADKSYGIQVARLAGVPDSVIDRAKEIASWLEETDVTDKAKNLQVRTSAKKKEVVR 829
>gi|261878911|ref|ZP_06005338.1| DNA mismatch repair protein MutS [Prevotella bergensis DSM 17361]
gi|270334493|gb|EFA45279.1| DNA mismatch repair protein MutS [Prevotella bergensis DSM 17361]
Length = 888
Score = 289 bits (739), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 262/949 (27%), Positives = 437/949 (46%), Gaps = 180/949 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------FMTA 143
TP+ +Q +K K+PD +L+ G + +G+DAE A+ +LGI +N A
Sbjct: 9 TPMMKQFFSMKAKHPDAVLLFRCGDFYETYGDDAETASGILGITLTKRNNGGNSGDIAMA 68
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTET-----AAIKAHGPGKAG------PFGRGLSA 192
P L+ ++ +L+ AG +V + Q E AAIK GK G RG++
Sbjct: 69 GFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKRAAIK----GKKGLSEMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + +++V + E+N+L V + GK GV ++I
Sbjct: 125 LVTPG-VAMSDNVLNYK-----ENNFLSAV-----HFGK-----------SACGVSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + G+ + ++ E +L S SP E+L + K E+ Y G
Sbjct: 163 STGEFLTGQGSYDYV----EKLLGSFSPKEVLYDRDRKKDFER----YFG---------- 204
Query: 313 SRDCF--IGGGALAEV---MSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL 367
+R C + E L ++ G TL +++ EGI +
Sbjct: 205 TRHCIFELDDWVFTEQSARQKLLKHFGTKTLKGFGVEHLR-----------EGI-----I 248
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
A A+ + + + I L + + + + T++ LE+++ +
Sbjct: 249 AAGAIMQYLEITQHTSINHITAL----QRIEEDKYVRMDKFTIRSLELIQPMQEDGR--S 302
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL+I++ T+T G RLLRRW+ PL D I R D V +
Sbjct: 303 LLNILDSTVTPMGGRLLRRWMVFPLKDVARIHDRQDIVEYFFK----------------- 345
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
+P F ++ L +G D++R I+++ +P E + + A+ +Q
Sbjct: 346 -------QPDFRQVVDEQLHRIG---DLERIISKVAVGRVSPREVVQLKNAL----TAIQ 391
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+ K ++ + LKRL G+ L ++ A + + ++
Sbjct: 392 PI--------KSACQSADNVSLKRL----------GEQLNLCESLRDRIAHEINPDPPLL 433
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRK------QLGMRNLEFMSVSGIT------ 655
I+ G EELD L ++ RK ++ R + +S +
Sbjct: 434 INKGNV--------MADGCNEELDQLRSISRKGKNFLIEIQQREADSTGISSLKVGFNNV 485
Query: 656 --HLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
+ +E+ FK VP W + + + RY +PE+ +++ A+E++ + ++
Sbjct: 486 FGYYLEVRNTFKDKVPETWIRKQTLAQAERYITPELKEYEEKILGADEKIIELEMRLFNE 545
Query: 712 FLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPV 771
+ + + Q +A +DCL + A +S +VRP VDD + + I GRHPV
Sbjct: 546 LILAMQDFIPQIQINANIIAHIDCLLSFAKVSETNLYVRPE-VDDSDILDIQ--QGRHPV 602
Query: 772 LDTI--LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
++T L +++VPND L ++ IITGPNM GKS +RQ ALI ++AQ+G FVPA
Sbjct: 603 IETQMPLGEHYVPNDVYLDTAKQQVMIITGPNMAGKSALLRQTALIVLLAQIGCFVPAER 662
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
A + ++D I+TR+GASD++ QG STF+ E+ EAS IL N T SLV+ DELGRGTST+DG
Sbjct: 663 ARVGLVDKIFTRVGASDNLSQGESTFMVEMTEASNILNNVTPHSLVLFDELGRGTSTYDG 722
Query: 890 VAIAYATLDYLLEHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
++IA+A ++YL E K LF THY ++ +++ F + ++VS
Sbjct: 723 ISIAWAIVEYLHEQPKAQARTLFATHYHELNEMEKHF-ARIKNFNVSV-----------K 770
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ D V +L K++PG SE SFG VA++A +PPS + R+ I +LEA+
Sbjct: 771 EVDGKVIFLRKLMPGGSEHSFGIHVAEIAGMPPSIVRRSNTILKQLEAD 819
>gi|345881239|ref|ZP_08832762.1| DNA mismatch repair protein mutS [Prevotella oulorum F0390]
gi|343920167|gb|EGV30904.1| DNA mismatch repair protein mutS [Prevotella oulorum F0390]
Length = 888
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 270/955 (28%), Positives = 443/955 (46%), Gaps = 158/955 (16%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS 144
+K TP+ +Q +K K+PD L++ G + +GEDA +AA +LGI +N S
Sbjct: 4 QDKGLTPMMKQFFSMKAKHPDALMLFRCGDFYETYGEDAVVAAGILGITLTKRNNSAENS 63
Query: 145 I-----PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
I P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 64 IEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREEIKGKKGLSQTDKMVKRGITE 123
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + ++++ + E+N+L V FG GV ++I
Sbjct: 124 LVTPG-IAISDNILNNK-----ENNFLAAVQ-------------FGKA---ACGVSFLDI 161
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRV 309
STG+ + GE + ++ E +L + SP E+L + ++ L V
Sbjct: 162 STGEFLTGEGSYDYV----EKLLANFSPKEVLYNRERRADFQRYFGTKLCVFEMEDWVFT 217
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
E SR L ++ G +L +++ EGI+ + +
Sbjct: 218 EQNSRQ------------KLLKHFGTKSLKGFGVEHLK-----------EGIIASGSI-L 253
Query: 370 QALALT----IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEY 425
Q L +T I H+ S L + + T++ LE+L E
Sbjct: 254 QYLEMTEHTHINHI------------TSLARLEADKYVRMDRFTIRSLELLAPMQ--EEG 299
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
+LL +++ T+T G R+LRRW+ PL + I RLD V + +
Sbjct: 300 RSLLSVIDRTVTPMGGRMLRRWLVFPLKEVVPIDERLDMVDYFFKDLN------------ 347
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
S+V L R D++R ++I TP E + + A L A K
Sbjct: 348 ---------------FQSTVDEQLHRMGDLERIASKIAVGRVTPREMVQLKWA-LSALKP 391
Query: 546 LQQ--LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+Q+ L D +++ K LH V + K + + ++GD
Sbjct: 392 IQEACLSADNAVIQRM-GKQLHLC-----------EHVRDRIEKEIQNDPPQLVNKGD-- 437
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELP 661
+I++G +E+ R +++K+ L L +Q G+ +L+ F +V G + +E+
Sbjct: 438 ---VIADGFNAELDDLRAISRNSKDYLLKLQAKEAEQTGINSLKIGFNNVFG--YYLEVR 492
Query: 662 ANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
FK VP W + + + RY +PE+ +++ A E++ + ++ +
Sbjct: 493 NTFKKNVPETWIRKQTLAQAERYITPELKEYEEKILGAEEKILALEAKLFNELILAVQDD 552
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-- 777
QA LA LD L A ++R +++RP+ DD+ + I GRHPV++T L
Sbjct: 553 IPRIQADANLLAQLDVLLGFAKIARENHYIRPIIHDDN---VLKIVQGRHPVIETQLPLG 609
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
+ +VPND L ++++ +ITGPNM GKS +RQ ALI +MAQVG FVPA AE+ ++D
Sbjct: 610 EVYVPNDVTLDSDKQQIMMITGPNMAGKSALLRQTALIVLMAQVGCFVPAERAEIGLVDK 669
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GASD++ G STF+ E+ EA+ IL N + +SLV+ DELGRGTST+DG++IA+A +
Sbjct: 670 IFTRVGASDNLSLGESTFMVEMTEAANILNNVSPRSLVLFDELGRGTSTYDGISIAWAIV 729
Query: 898 DYLLEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
+YL E K LF THY ++ +++ F+ + Y+VS D V +
Sbjct: 730 EYLHEQPKARARTLFATHYHELNEMEKHFS-RIKNYNVSV-----------KNVDGKVIF 777
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE---AEVSSRVQNRSAK 1007
L K+ G SE SFG VA++A +P S + RA + +LE AEV + + +AK
Sbjct: 778 LRKLQRGGSEHSFGIHVAEIAGMPRSIVKRANTVLKELEQDNAEVGAAAKPNTAK 832
>gi|68467217|ref|XP_722270.1| hypothetical protein CaO19.12411 [Candida albicans SC5314]
gi|68467446|ref|XP_722156.1| hypothetical protein CaO19.4945 [Candida albicans SC5314]
gi|46444105|gb|EAL03382.1| hypothetical protein CaO19.4945 [Candida albicans SC5314]
gi|46444229|gb|EAL03505.1| hypothetical protein CaO19.12411 [Candida albicans SC5314]
Length = 1214
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 265/1016 (26%), Positives = 437/1016 (43%), Gaps = 128/1016 (12%)
Query: 8 VISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKK-- 65
++ RF A S SSS ++P+P T + SF + L + +K
Sbjct: 236 ILGRFDA-GSGSFRQSSSVATPKPKSTTIKSLTPSKKSFEKENEERYQWLVDIRDAEKRP 294
Query: 66 ---PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P P TL IP + K+T E+Q ++K+K + ++ + G + + D
Sbjct: 295 IDHPDYDPRTLY-IPQSAWS-----KFTAFEKQYWQIKSKMWNTVVFFQKGKFYELYEND 348
Query: 123 AEMAAKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
A +A L I N A IP + ++ G+KV V+Q E+ +K
Sbjct: 349 AVIANTQFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVEQKESMLVKQMRG 408
Query: 181 GKAGP---FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVF 237
G R L + T TL + + + Y + + ++D G
Sbjct: 409 GATKEEKIIERELKGILTAGTLTNLDMIS------NDMATYCLSIKEEDKEDGT------ 456
Query: 238 GDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML 297
GV V+ +T ++ + E +D + L+ ++ ++P E++ + Q +
Sbjct: 457 -----KTFGVAFVDTATSELNFIELDDDAECTKLDTLITQINPKEIICEKGNLCQIATKI 511
Query: 298 LAYA-------GPASNVRVECASRDCFIGGGALAEVM--SLYENMGEDTLSNNEDQNMDV 348
L + A N E D AL +++ Y+ D SN +D
Sbjct: 512 LKFCTHSDHQIWNALNPITEFWDYDI-----ALEQLVKAKYYDAENLDDYSNYPKVLVDF 566
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTL 405
E NH+ A + T IM LG S + + M L
Sbjct: 567 KE--NHQVAFNAFGGLLYYLKMLKLDT----------SIMSLGNIHEYHISRNSASHMIL 614
Query: 406 SANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAV 465
TL LE+L N S+G+ GTL ++N T +G R L++WV HPL + I+ R D+V
Sbjct: 615 DGVTLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQLQKWVLHPLFKVDEINQRYDSV 674
Query: 466 SEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR 525
+ R+ IL L ++ PD++R + R+
Sbjct: 675 DYLMNDGLELRS-----------------------ILQDTLANI---PDLERLLARVHGG 708
Query: 526 TATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
T +F+ V+++ I G + V + S +L + + S P +
Sbjct: 709 TLKFRDFLKVIESF---------ESIAGVSSKLVDFTNVESGMLYKYL--KSFPHEM--- 754
Query: 586 AKLLSTVNKEAADQGDLLNLMII-SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
+ L ++A D+ N +I+ S G E ++ +++ K +LD L+ ++ +
Sbjct: 755 -RELIQQWEDAFDREQAKNDIIVPSAGTDEEFDNSQASMEDLKTQLDKLLKEYKRTYKSQ 813
Query: 645 NLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIV 704
+ + +LIE+P KVP +W ++ ST K RY+SPEV T +L E +V
Sbjct: 814 EICYRDSGKEIYLIEVPFKLKVPGDWKQMGSTSKVKRYYSPEVETLAKELRGQQELHKMV 873
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQI 762
C ++F +Y + +Q +A +DCL AL S + RP ++ + I
Sbjct: 874 CDTLKIRMYEKFDKHYNVWMQVIQTIANIDCLLALTKASETIGYPSCRPKLIEADKGC-I 932
Query: 763 HICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVG 822
+ RHP + F+PND L + + ++TG N GKS +R AL I++Q+G
Sbjct: 933 NFKELRHPCF--VSTKEFIPNDVQLGGDEPHFGLLTGANAAGKSTLMRTTALAIILSQIG 990
Query: 823 SFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGR 882
++PA SAEL +D I TR+GA+D+I QG+STF EL+E IL N T +SLVI+DELGR
Sbjct: 991 CYIPAESAELTPVDRIMTRLGANDNILQGKSTFFVELSETKKILSNATPRSLVILDELGR 1050
Query: 883 GTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV- 941
G S+ DG AIA + L +L H + + F THY GT +S+ T ++
Sbjct: 1051 GGSSSDGFAIAESVLHHLATHVQSLGFFATHY--------------GTLGLSFKTHPQIK 1096
Query: 942 ---MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
MG + +++T+LYK+ G + SFG VA + +P + + A + A E
Sbjct: 1097 QLRMGIVVDSGSRNITFLYKLETGTAPKSFGMNVASMCGIPDAIVDNAEIAAKAYE 1152
>gi|302039393|ref|YP_003799715.1| DNA mismatch repair protein MutS [Candidatus Nitrospira defluvii]
gi|300607457|emb|CBK43790.1| DNA mismatch repair protein MutS [Candidatus Nitrospira defluvii]
Length = 882
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 268/929 (28%), Positives = 430/929 (46%), Gaps = 126/929 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TPL +Q ++K Y D +L VG + F EDA A+K+L I IP
Sbjct: 7 TPLMRQYRDIKQAYRDAILFFRVGDFYEMFQEDAVEASKLLSIALTSRDKSSGTPIPLCG 66
Query: 150 LNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+ H + +L+ AG V + +Q E + G R + LYT TL +E
Sbjct: 67 VPYHAATNYIAKLLRAGRTVALCEQVEDPKLAK------GLVRREVVRLYTPGTLIDSEF 120
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF-DVRLGVVAVEISTGDVVYGEFN 263
+ E SN L V +R G G D G+ +E+STGD EF+
Sbjct: 121 LPSTE------SNVLAAV--------SVRLRSAGTGRKDCSYGLATLEVSTGDYWLSEFH 166
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ L L L P ELL + LS + GP C ++
Sbjct: 167 GPQAEAALRDELARLEPRELLFPENLSPDELQWTADLTGP------RCCTQPA------- 213
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHLKQF 382
T + E + + EQ H ++E ++ L +QA A +R++++
Sbjct: 214 -------------TWFDQEQGRIALQEQ-FHVHSLEAFGCHILTLGIQAGAAVLRYVRET 259
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR------NNSNGSEYGTLLHIMNHTL 436
+ R M L + T++ LE+++ +SN S Y TLL I++ T+
Sbjct: 260 QPSAPLDHIRPPRVRQDDDAMHLDSVTIRNLELVKPAGRAEESSNQSPY-TLLGILDRTV 318
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T GSRLLR W+ PL + I RL AV E+ ++ D+ +
Sbjct: 319 TAMGSRLLREWLLRPLVNSAAIEVRLTAVDEL-----------------KRQIDIRV--- 358
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL-YAGKQLQQLHIDGEY 555
+ T+L DI R +R+ A P + +A+ ++ Q + +D
Sbjct: 359 -------RLRTALRIVQDISRLCSRMSLGVANPRDVLALKISVSSLPAIQAELSALDSPL 411
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+ S ++ L LI A + +EA + + I+ +G E
Sbjct: 412 IADLRSSWDNAQDLYELIEGA---------------IEQEAP--VSIRDGSILKSGFHPE 454
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKV 673
V RKA + K + L R++ G+ +L+ + IEL AN KVP ++ +
Sbjct: 455 VDELRKASREGKGWIAGLEAKERERTGVESLKIRYNQVFGYYIELTKANLGKVPPDYIRK 514
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ R+ + E+ +++ A+ +LT + +A ++ A Q + LA L
Sbjct: 515 QTLVNAERFMTTELKELEERVTGADTKLTALEQALFEQLRTRLATETARLQEISRRLAIL 574
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAERE 792
D + ALA + +VRP VD+ + +HI GRHPV++ + L F+PNDT+L
Sbjct: 575 DVVAALAETAALNRYVRPT-VDEGD--GLHILQGRHPVVERLDLSGGFIPNDTHLDLATS 631
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
I+TGPNM GKS Y+RQVALI +MAQ+GSFVPA+ A + + D I+TR+GASD++ G+
Sbjct: 632 RLHILTGPNMAGKSTYLRQVALITLMAQMGSFVPATEARIGLTDRIFTRVGASDNLAGGQ 691
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLF 910
STF+ E+ E+++IL T +SL+++DE+GRGTST+DG++IA+A +Y+ + ++ LF
Sbjct: 692 STFMVEMTESAHILNCATPRSLILLDEIGRGTSTYDGLSIAWAIAEYIQDPQRLGARTLF 751
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ +++ G + Y V+ + D V +L K++ G ++ S+G
Sbjct: 752 ATHYHEMTQLESLREG-ITNYCVAV-----------QERDGRVLFLRKIIRGGADRSYGI 799
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSS 999
VAQLA LP I RA + A+LE+ SS
Sbjct: 800 HVAQLAGLPDQVIHRAKAVLAQLESSSSS 828
>gi|429748845|ref|ZP_19282003.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429169535|gb|EKY11282.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 862
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 263/929 (28%), Positives = 433/929 (46%), Gaps = 156/929 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----A 143
K TPL +Q ++K+KYPD LL+ VG + FGEDA AA VL I +N A
Sbjct: 3 KETPLMKQYNQIKSKYPDALLLFRVGDFYETFGEDAVKAAAVLDIVLTNRNNGTERSELA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
P +N ++ RLV AG++V + Q E +K G RG++ L T
Sbjct: 63 GFPYHSINTYLPRLVKAGYRVAICDQLEDPKTVK-------GIVKRGVTELVTPG----- 110
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
V +D +SN + V +GK NGV +++STG+ + +
Sbjct: 111 --VALNDDILQSKSNNFLASV----WIGKQVNGV-----------AFLDVSTGEFLVSQG 153
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+ +S ++ +L + P+ELL+ + Q ++ A+ G CF
Sbjct: 154 D----KSYIDKLLQNFHPSELLIAK---HQKKEFAAAFGGDFH----------CF----- 191
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD--LAVQALALTIRHLK 380
E E+ + L+ + Q N G+ + D L+ A+ + +
Sbjct: 192 YLEDWVFKEDYAQQLLTKHF--------QTNSLKGF-GVEELTDALLSAGAILYYLSETQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
L+ I + ++ + L T++ LE+ +S S +LL +++ TL+ G
Sbjct: 243 HHQLQHI----TRIQRIAEEAYVWLDKFTIRNLELYTGSSAQS--VSLLDVIDKTLSPMG 296
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SR L+RW+ PL I R + V+ + + ES+ +H
Sbjct: 297 SRTLKRWLALPLKKIEKIRQRHEVVAYFLKQLPEL---ESIKEH---------------- 337
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
+ R DI+R I+++ + P E + ++
Sbjct: 338 --------IARIGDIERLISKVATQKINPREVV------------------------QLC 365
Query: 561 SKTLHSALLKRLILTA--SSPAVIGK--------AAKLLSTVNKEAADQGDLLNLMIISN 610
S H +K+L LT+ S +++G A++ T+N+EA ++ I+
Sbjct: 366 SSLEHIPQIKQLCLTSGNESLSLLGDKLHDCQQLCARIRETLNEEAP--VNIAKGNAIAA 423
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPL 668
G +E+ R S K LD L+ ++ G+ +L+ + + + +E+ K VP
Sbjct: 424 GYSAELDELRGLSHSGKSYLDDLLLRETQRTGIPSLKIDNNNVFGYYLEVRNTHKDKVPA 483
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
+W + + RY + E+ ++ A E++ + +A + L Y A Q
Sbjct: 484 DWVRKQTLVNAERYITNELKEYEAKILGAEEKIGQLEQALYAELLNYIAEYIAPVQQNAI 543
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDN-FVPNDTN 786
+ +DCL ATL+ N+ +P DD+ I I GRHPV++ L +D ++ ND
Sbjct: 544 LVGQIDCLAGFATLALQNNYQQPEMSDDY---VIDIKEGRHPVIEKQLPIDTPYIANDVY 600
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L E++ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA+SA + ++D I+TR+GASD
Sbjct: 601 LDREQQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPATSAHIGIIDKIFTRVGASD 660
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KK 905
+I G STF+ E+NEA+ IL N + +SLV++DE+GRGTST+DG++IA+A +YL +H +
Sbjct: 661 NISLGESTFMVEMNEAALILNNISERSLVLLDEIGRGTSTYDGISIAWAIAEYLHQHPSR 720
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ ++ F + Y+VS V DS V +L K+V G S
Sbjct: 721 AKTLFATHYHELNEMTESFE-RIKNYNVS------VKETTDS-----VLFLRKLVAGGSA 768
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLE 994
SFG VA++A +P I +A + KLE
Sbjct: 769 HSFGIHVAKMAGMPQYVIQKANKMLQKLE 797
>gi|325859897|ref|ZP_08173027.1| DNA mismatch repair protein MutS [Prevotella denticola CRIS 18C-A]
gi|325482823|gb|EGC85826.1| DNA mismatch repair protein MutS [Prevotella denticola CRIS 18C-A]
Length = 887
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 258/935 (27%), Positives = 435/935 (46%), Gaps = 144/935 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------ 139
+K TP+ +Q +K ++P L++ G + +GEDA +AK+LGI +N
Sbjct: 5 DKGLTPMMKQFFSMKAQHPGALMLFRCGDFYETYGEDAVESAKILGITLTRRNNGGNCDS 64
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 65 IEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREAIKGKKGLSAMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T + +++V + E+N+L V FG G GV ++I
Sbjct: 125 LVTPG-VALSDNVLNYK-----ENNFLAAVH-------------FGKG---ACGVSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E +L + P E+L + + E+ Y G R+
Sbjct: 163 STGEFLTGEGTFDYV----EKLLGNFQPKEVLFDRAKKQDFER----YFG----TRLCTF 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D ++ A L ++ G L + V N A I+ Q L
Sbjct: 211 EMDDWVFTDQTAR-QKLLKHFGTKNL-----KGFGVDHLHNGVVAAGAIL-------QYL 257
Query: 373 ALT----IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGT 427
+T I H+ S + + + T++ LE++ N +G+ +
Sbjct: 258 EITQHTHINHI------------TSLARIEEDKYVRMDRFTIRSLELIAPMNEDGA---S 302
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL ++++T+T G R+LRRW+ PL D I+ RLD V
Sbjct: 303 LLDVIDNTVTPMGGRMLRRWMVFPLKDAKPINERLDVV---------------------- 340
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
D EP F + +G D++R I+++ +P E + + A++ +Q
Sbjct: 341 --DYLFREPDFRECIDEQFHRIG---DLERIISKVAVGRVSPREVVQLKNALM----AIQ 391
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+ Y + T K + L ++ + K + + A +G+ +
Sbjct: 392 PVKTACLYAKSETLKRIGEQL-------NLCESLRDRIEKEIQPDPPQLAAKGN-----V 439
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--K 665
I+ G ++ R + K+ L + +Q G+ +L+ + + +E+ F K
Sbjct: 440 IAPGYDRQLDELRSIRDNGKQYLLEIQEKEAEQTGITSLKIGFNNVFGYYLEVRNTFKDK 499
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP +W + + + RY +PE+ +++ A+E++ + + +++ + + Q
Sbjct: 500 VPEDWIRKQTLAQAERYITPELKEYEEKILGADEKILAMEGQLFMELIQDMQEFIPQIQI 559
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPN 783
+A LDCL + +S+ + +VRPV VD E + I GRHPV++T L + +VPN
Sbjct: 560 NANLIAHLDCLLSFMKVSQQQRYVRPV-VDGSEVLDIK--QGRHPVIETQLPIGEQYVPN 616
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D L E + +ITGPNM GKS +RQ ALI ++AQ+G FVPA A + ++D I+TR+G
Sbjct: 617 DVLLDTEHQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRVG 676
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASD+I G STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA+A ++YL EH
Sbjct: 677 ASDNISLGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEH 736
Query: 904 KKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
+ LF THY ++ +++ F + ++VS + D + +L K+ P
Sbjct: 737 PRVQARTLFATHYHELNEMEKSFP-RIRNFNVSV-----------KEVDGKIIFLRKLEP 784
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G SE SFG VA++A +P S + RA VI +LE +
Sbjct: 785 GGSEHSFGIHVAEIAGMPRSIVKRANVILKELETD 819
>gi|160945081|ref|ZP_02092307.1| hypothetical protein FAEPRAM212_02600 [Faecalibacterium prausnitzii
M21/2]
gi|158442812|gb|EDP19817.1| DNA mismatch repair protein MutS [Faecalibacterium prausnitzii
M21/2]
Length = 871
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 266/921 (28%), Positives = 426/921 (46%), Gaps = 130/921 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ QQ +E+K ++ D +L +G + F +DA A++ L G L
Sbjct: 5 SPMMQQYLEIKNQHKDEILFYRIGDFYEMFFDDAVTASRELDLTLTGKQCGLAERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P +V RL+ G+KV + +Q E P KA G R + + T T+
Sbjct: 65 VPFHSYEGYVARLIAKGYKVAICEQVE-------DPAKAKGLVKRDIIRVVTPGTV---- 113
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF--DVRLGVVAVEISTGDVVYGE 261
ES+ L DD RN + + G+ ++STG E
Sbjct: 114 ----------IESSML----QDD------RNNYIASLYLKGKKAGLCFADVSTGTAHITE 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ + L P+E+LL L E + AY + VE + + G
Sbjct: 154 LAADKIAPAVITELCRYHPSEVLLNPGLLDCRE--VTAYIKKNMSCSVELVEDERYAPGL 211
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN-MPDLAVQALALTIRHLK 380
+ +L E G D Q + +G R A+ ++ + D ++
Sbjct: 212 VAS---ALEEQFGRDW-----PQTTGIAAEGLVRFAMAALLEYLHDTQIK---------- 253
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
G+ER+ + + + + M LS T LE+ + GTLL +++ T T G
Sbjct: 254 --GVERL----KTVITYNEAQFMRLSPVTRANLELTETLRGREKRGTLLWVLDKTSTAMG 307
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R+LR W+ PL LI+ RL+AV E++ + D+T + +Y
Sbjct: 308 KRMLRSWIEQPLISSPLINHRLNAV-------------EALVRQTMVRGDLT---EELHY 351
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
I D++R +TR + +ATP E + Q +L L + E
Sbjct: 352 I-----------ADLERLMTRTVYGSATPKEIYTLAQTC----DRLPGLR---KQAEGCN 393
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
L L AS + A++ + V+ +A L + +I+ G +EV R
Sbjct: 394 CPELAE-------LAASIDPLEDIKARIYAAVDPDAPST--LKDGGVIAKGYHAEVDELR 444
Query: 621 KAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKK 678
+ K L L R++ G+ L+ + IE+ ++K VP + + +
Sbjct: 445 SIRDNTKGVLAQLEARLRQETGIPKLKIGYNHVFGYFIEVSNSYKNLVPETYIRKQTLTS 504
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
RY + E+ ++ A+E L + R +D L+ G Q A+A LD L A
Sbjct: 505 GERYITQELKELESKILGAHERLISLERRLFDELLESIGAQLDRIQRTANAIAQLDVLAA 564
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQII 797
LA ++ N+ RPV VDD + + I GRHPV++ +L + FVPNDT L+ + C II
Sbjct: 565 LAQVAAENNYCRPV-VDDSDV--LTITEGRHPVVEQVLKGSMFVPNDTTLNCTTDRCLII 621
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS Y+RQ ALI +MAQ+GSFVPA+S + V+D I+TR+GASD + G+STF+
Sbjct: 622 TGPNMAGKSTYMRQNALIALMAQIGSFVPAASCHVGVVDAIFTRIGASDDLAAGQSTFMV 681
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK---CMVLFVTHY 914
E+ E + IL+N TA+SLV++DE+GRGTST DG++IA A ++++ + K C LF THY
Sbjct: 682 EMTEVAEILKNATAKSLVVLDEIGRGTSTFDGMSIARAVVEHIADPAKGLGCKTLFATHY 741
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ +++ G V Y+++ K +D+T+L ++V G ++ S+G +VA+
Sbjct: 742 HELTELEGTVEG-VKNYNIAV-----------KKRGEDITFLRRIVRGPADDSYGIEVAK 789
Query: 975 LAQLPPSCISRATVIAAKLEA 995
LA LP S RA + LEA
Sbjct: 790 LAGLPGSVTRRAHEVLRTLEA 810
>gi|227499535|ref|ZP_03929642.1| DNA mismatch repair protein MutS [Anaerococcus tetradius ATCC 35098]
gi|227218414|gb|EEI83665.1| DNA mismatch repair protein MutS [Anaerococcus tetradius ATCC 35098]
Length = 868
Score = 288 bits (738), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 257/956 (26%), Positives = 447/956 (46%), Gaps = 156/956 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------AHLDHNFM 141
K TP+ + V++K + D +L+ VG + F +DA + +K L + H M
Sbjct: 9 KLTPMLKHYVDVKNDFRDSILLYRVGDFYESFFDDAIITSKALSLTLTGKDCGHEKKAPM 68
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
+P ++ + +LV G+KV + Q E P +A G R ++ + T T+
Sbjct: 69 CG-VPHHVIDSYAFKLVKQGYKVALCDQVE-------DPKEAKGLVKRAITRVITPGTIT 120
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E + E+ NYL+ + +D +G L + +ISTG +V
Sbjct: 121 DMESLDNREN------NYLLSLFQND----------YG------LSISYCDISTGKLVCL 158
Query: 261 E---FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
E + + ++ + ++P+E+L+ S
Sbjct: 159 EIKGLSSSLAKKAIDQIE-RINPSEILINSDFSDN------------------------- 192
Query: 318 IGGGALAEVMSLYENMGE---DTLSNNEDQNMDVPEQGNH--RSAIEGIMNMPDLAVQAL 372
V+ Y N E + + N +D NH + + I NM LA+ +L
Sbjct: 193 --------VLKRYFNDNEIFLNYIENPKDYLNRASMIKNHLGETNFKKISNMR-LAILSL 243
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
A I ++ ++ + + + + L + M L ANT + LE+ RN +N ++ TLL I+
Sbjct: 244 ANLIDYIYKYHKDNLSHIN-NIEVLEINDYMQLEANTRRNLELHRNLNNNTKENTLLSIL 302
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+ T+ GSRL+ ++ PL DR+ I+ RLD V E
Sbjct: 303 DKADTVMGSRLINEYLERPLIDRDKINRRLDIVESFLED--------------------R 342
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
I+ ILS V D++R I +I ++ A +FI++ +I K + L
Sbjct: 343 ILSNNISNILSDVY-------DLERLIAKISYKRANARDFISIKNSIANMPKLREILE-- 393
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL--LNLMIISN 610
S++ H ++ + L P V + + ++K D L II +
Sbjct: 394 -------ASESEH---IRNIALNL--PDV----SDIYELIDKAIVDDPPLGISEGGIIKD 437
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPL 668
+E+ + A ++A+ +L N +++ ++N + + + IE+ AN KVP
Sbjct: 438 KYNTELDSLKIASKNAQSDLILYENEEKEKTAIKNYKIVFNKNNGYSIEITKANLDKVPK 497
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
N+ + + K RY S + + + ++L + + + ++ + QA +
Sbjct: 498 NYVRKQTLKNQERYTSERLEEIANIILGGKDKLNELEYKIFSNIREKILANTIKLQALAK 557
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNL 787
LA +D L+ A ++ ++VRP DD+ I I GRHPV++ L +N F+PNDT++
Sbjct: 558 MLAMIDALNTFAKIALENSYVRPKLRDDN---IIKIKDGRHPVIENNLKENEFIPNDTDI 614
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ QIITGPNM GKS Y+RQ+A+I I+AQ+GSFVPA + E+ + D ++TR+GASD+
Sbjct: 615 GSRENLIQIITGPNMAGKSTYMRQMAIIIILAQIGSFVPAKACEISICDQVFTRIGASDN 674
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
I +G STF+ E+NE S IL+N T S VI+DE+GRGTS+ DG++IA A ++YL +HKK
Sbjct: 675 ISKGESTFMLEMNEVSNILKNSTKDSFVILDEVGRGTSSDDGLSIAMAIVEYLSKHKKVK 734
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
+F TH+ ++ ++ + +V + L + + ++ +L K+ G S+ S
Sbjct: 735 TVFATHFHELTILEDELE-NVTNLKIEIL-----------EENNNLVFLRKIKKGKSDRS 782
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEA----------EVSSRVQNRSAKRDLLVK 1013
+G +VA+L+ LP I A +I KL E+SS + + S ++ L +K
Sbjct: 783 YGIEVAKLSGLPNEIIDNAKIIMDKLSTNEIFEINKSKELSSSIADISNQKILAIK 838
>gi|345858097|ref|ZP_08810510.1| DNA mismatch repair protein MutS [Desulfosporosinus sp. OT]
gi|344328902|gb|EGW40267.1| DNA mismatch repair protein MutS [Desulfosporosinus sp. OT]
Length = 850
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 262/924 (28%), Positives = 432/924 (46%), Gaps = 156/924 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +K K PD +L +G + FGEDAE+AA +L I A
Sbjct: 3 TPMMRQYQGIKAKAPDAILFYRLGDFYEMFGEDAELAAPILQIALTGRDAGEGKKIAMCG 62
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P L+ ++ +LV AG KV + +Q E A G RG+ + + TL
Sbjct: 63 VPYHALDNYLAKLVKAGHKVAICEQVEDAK------NAKGIVKRGIIRIVSPGTL----- 111
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
E ++YL V D+ G+ +++STG EF+
Sbjct: 112 ---TESVSERSNHYLASVYHDE-----------------HWGLAFLDLSTG-----EFSI 146
Query: 265 GFLRSGLEAVLLSLS---PAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
F S E +L LS PAELLL L K+ + + G +VR R F GG
Sbjct: 147 -FQTSDFEVLLAELSRINPAELLLPPELMKRPK----PWVGYYCSVR----ERKTF-GGQ 196
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM--NMPDLAVQALALTIRHL 379
L ++ S +D ++ P +A+ + MP + I +
Sbjct: 197 EL-----------QNRFSGQQDLFLEFPVATQAATALWTYLLETMPGVD----PTHIIEI 241
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
K F E+ M L R ++E+T S ++ + GTLL +++ T T +
Sbjct: 242 KTFRSEQWMFLDQWTRH---NLELTESLRSV------------GKRGTLLSVLDLTQTAF 286
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G RLL+ W+ PL ++ I RL+A+ E+ TS+S + D +
Sbjct: 287 GGRLLKHWIDKPLLSQDEIERRLNAIEEL--------TSDSFLRKD------------LF 326
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
+LS V D++R + ++ + TA + +++ Q L + E R +
Sbjct: 327 KLLSEVY-------DLERLMGKVSYGTANAKDLLSLAQT----------LALLPEIRTLI 369
Query: 560 TSKTLHSALLKRLILTASSPAVIGK---AAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
T+ + + L +P + G +KL S +N L + II G EV
Sbjct: 370 TASSAET-------LKIHAPHLEGLDSFVSKLQSALN--PTPPLSLRDGNIIKTGYSQEV 420
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKVN 674
R KE + L N R++ G+R+L+ + IE+ AN +P ++ +
Sbjct: 421 DELRYIASGGKEWVAQLENAERERTGIRSLKIGYNKVFGYFIEITHANAHLIPTDYQRKQ 480
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ R+ +PE+ ++ A E+L + + ++ + Q LA +D
Sbjct: 481 TLSNAERFITPELKEYEQKIIGAEEKLKDLEYELLLALREDVRTHTKAILQVAQVLAEVD 540
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREY 793
+LA ++ ++VRP + E V I GRHPV++ +L FVPNDT + +E +
Sbjct: 541 VFVSLAEVAVRNHYVRPQIKHNGEIV---IIEGRHPVVEQMLEPGVFVPNDTQM-SESHH 596
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNM GKS Y+RQVALI +MA +GSFVPA A + +D I+TR+GASD + G+S
Sbjct: 597 LALITGPNMAGKSTYMRQVALIVLMAHIGSFVPAKKASIAQVDRIFTRVGASDDLAAGQS 656
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFV 911
TF+ E+ E ++ILR T++SL+I+DE+GRGT+T DG++IA+A ++L++ + LF
Sbjct: 657 TFMVEMQEVAHILRYATSKSLIILDEIGRGTATFDGLSIAWAVAEHLIQSQGFNPKTLFA 716
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ ++ +F + HV + +D+ +L+K++PG ++ S+G +
Sbjct: 717 THYHELTQLQDEFP-RLFNLHVGV-----------KERGEDIVFLHKILPGKADRSYGIQ 764
Query: 972 VAQLAQLPPSCISRATVIAAKLEA 995
VA+LA LPP + RA + +LE+
Sbjct: 765 VARLAGLPPELLQRAKTLLIELES 788
>gi|359405902|ref|ZP_09198629.1| DNA mismatch repair protein MutS [Prevotella stercorea DSM 18206]
gi|357557252|gb|EHJ38804.1| DNA mismatch repair protein MutS [Prevotella stercorea DSM 18206]
Length = 878
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 261/940 (27%), Positives = 430/940 (45%), Gaps = 149/940 (15%)
Query: 81 SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNF 140
+Q ++ TP+ +Q K ++PD LL+ G + + +DA AAK+LGI N
Sbjct: 2 AQKKNDDGLTPMMRQFYTFKKEHPDALLLFRCGDFYETYADDAVEAAKILGITLTRRSNG 61
Query: 141 MT--------ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E + RG++
Sbjct: 62 KNPSSAACEMAGFPYHALDTYLPKLIRAGKRVAICDQLEDPKLTK------TLVKRGITE 115
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYL--VCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
L T A +D E+N+L VC+ GV +
Sbjct: 116 LVTPGV--AMDDTVLNYK----ENNFLAAVCMAK------------------TACGVAFL 151
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
+ISTG+ + GE ++ E +L S+ P E+L + L ++ E+
Sbjct: 152 DISTGEFLTGEGTFDYV----EKLLSSIQPKEVLYDRQLKREFEERF------------- 194
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAV 369
S+ C V L + M L+ + + G + ++G ++ L V
Sbjct: 195 -GSKWC---------VFELDDWM----LTEQSSRQKLLSHFGT--TTLKGFGVDHLHLGV 238
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
A +++L+ +I + S + + L T+ LE+L++ + +LL
Sbjct: 239 TAAGAILQYLEMTQHTQIGHI-TSLARIDADRYVRLDRFTIHSLELLQSMQDDGV--SLL 295
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ T T G RLLRRW PL D I+ RLD V +R
Sbjct: 296 SVIDRTCTPMGGRLLRRWTIFPLRDVATINKRLDVVETF------FR------------- 336
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQ 547
+P F + L +G DI+R I+++ +P E + + A+ L K
Sbjct: 337 -----KPDFRQTVDEHLHRIG---DIERIISKVAVGRVSPREVVQLKYALGALKPIKAAC 388
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLI--LTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
+ E R L AL +R+ L P ++ K
Sbjct: 389 LTNDSAEIRSIGDQINLCEALYERIDRELQQDPPQLVAKGG------------------- 429
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK 665
+I+ G E+ R + ++ L + ++ G+++L+ + + +E+ +K
Sbjct: 430 -VIATGFSPELDELRSISRGGRDYLLKIQEEEAQKTGIQSLKVGYNNVFGYYLEVRNTYK 488
Query: 666 --VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
VP W + + RY + E+ ++ A+E++ ++ + + + Y +
Sbjct: 489 DQVPQEWIRKQTLANAERYITEELKQYEQKIMGADEQILVLETRLFTELVTDMQAYIPQI 548
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFV 781
QA +A LDCL + A + +VRPV DD+ + I +GRHPV++T L + +V
Sbjct: 549 QADANIVARLDCLLSFAKTAEEHRYVRPVVEDDN---VLEIRAGRHPVIETQLPVGEEYV 605
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND L E++ IITGPNM GKS +RQ ALI +MAQ+G FVPA SA + V+D I+TR
Sbjct: 606 PNDIELDTEQQQIMIITGPNMAGKSALLRQTALITLMAQMGCFVPADSAHVGVVDKIFTR 665
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD+I G STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA+A ++YL
Sbjct: 666 VGASDNISLGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLH 725
Query: 902 EHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
++ K LF THY ++ +++ F + Y+VS + +D K V +L K+
Sbjct: 726 QNPKAQARTLFATHYHELNEMEKNFE-RIKNYNVS-------VKELDGK----VIFLRKL 773
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
+ G SE SFG VA++A +P S + RA I +LEA+ +S
Sbjct: 774 MRGGSEHSFGIHVAEIAGMPRSVVKRAENILKQLEADNAS 813
>gi|210621373|ref|ZP_03292609.1| hypothetical protein CLOHIR_00552 [Clostridium hiranonis DSM 13275]
gi|210154797|gb|EEA85803.1| hypothetical protein CLOHIR_00552 [Clostridium hiranonis DSM 13275]
Length = 956
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 253/929 (27%), Positives = 438/929 (47%), Gaps = 152/929 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFM 141
KK TP+ +Q +E K +Y D +L +G + F +DA +A+K L G L+
Sbjct: 6 KKLTPMMKQYMETKDRYKDCILFYRLGDFYEMFFDDAIVASKTLEIALTGKACGLEERAP 65
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
+P N ++ +LV G+KV + +Q E P KA G R + + T T
Sbjct: 66 MCGVPFHSANSYISKLVENGYKVAIGEQLE-------DPAKAKGIVKRDVIRVITPGT-- 116
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
V G ++NYL+ + RN +G+ V+ISTG
Sbjct: 117 ----VLDGSLLENKKNNYLMSIY---------RNKNM-------IGLSYVDISTG----- 151
Query: 261 EFNDGFLRSG-LEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
E N +L + + ++P+E++L LS + +A G N+ + + D
Sbjct: 152 ELNATYLNEDKIVEEIAKVNPSEIILND-LSFIDKIRDIATVG---NIYINESFDD---- 203
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
+ E +++ + + + +D+ G L +++A+ + ++
Sbjct: 204 --GMEEESIIFDYFPSEYI-----ETLDLDNDG--------------LIKKSIAIILNYI 242
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
++I +S + S M L T LE+ + G + G+LLH+++ T T
Sbjct: 243 YSTQ-KQITSNMSSINVYNSSEYMVLDMFTRTNLELTQTIRGGKKKGSLLHVLDRTSTAM 301
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G RLLR++V PL ++ I RL+ + EI N D Y
Sbjct: 302 GGRLLRKYVEQPLINKEKIEYRLNIIEEI-------------------NDD--------Y 334
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
+ ++ L + DI+R +I TP E I + +I ++L L K
Sbjct: 335 ILKEDLIEILKKIYDIERICGKIAFEKVTPKELINLKHSI----EKLPLL--------KE 382
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSE 615
T + +LK I +S + +L+ KE G+ II +G +E
Sbjct: 383 TVENSSCVILKEYI---NSMDTLEDIYQLIEDSIKEDPAITIKDGN-----IIKSGYNNE 434
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + + +++ G+++L+ F V G + IE+ K L A +
Sbjct: 435 LDELRDISKNGANIIKDIEAKEKERTGVKSLKIGFNKVFG--YYIEIT---KTNLAQANI 489
Query: 674 NST---KKTI----RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
+ + K+T+ R+ +PE+ +++ A E++ + + Q
Sbjct: 490 DESYIRKQTLSNAERFITPELKEIEEKILNAEEKIKAIEYEIFTEIRSAVYKNINRIQEV 549
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDT 785
+A +D ALA + +V+P +++ ++ I +GRHPV++ I+ ++NFVPNDT
Sbjct: 550 AHIVANVDVYAALAETASQNGYVKPNINNEN---RLEIKNGRHPVVENIVGIENFVPNDT 606
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L IITGPNM GKS Y+RQ A+I +MA +GSFVPA A++ ++D I+TR+GAS
Sbjct: 607 YLKTGENTINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAEYADIPIMDRIFTRVGAS 666
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D + QG+STF+ E+NE S IL+N T +SLVI+DE+GRGTST+DG+++A++ ++Y+ ++ K
Sbjct: 667 DDLSQGQSTFMVEMNEVSMILKNATDKSLVILDEIGRGTSTYDGISLAWSIVEYIQKNIK 726
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
C LF THY ++ D++ +F V Y + + DV +L K++P ++
Sbjct: 727 CKTLFATHYHELTDLEDEF-DEVKNYSIGV-----------KEDGNDVIFLRKIIPQAAD 774
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLE 994
S+G VA+LA+LP I+R++ I + LE
Sbjct: 775 KSYGIYVAKLAKLPDEVINRSSEILSDLE 803
>gi|325661608|ref|ZP_08150232.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472135|gb|EGC75349.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
4_1_37FAA]
Length = 876
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 257/941 (27%), Positives = 438/941 (46%), Gaps = 157/941 (16%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
QQ +E K +Y D +L +G + F +DA A+K L G L+ +P
Sbjct: 3 QQYMETKKQYSDCILFYRLGDFYEMFFDDAITASKELEITLTGKNCGLEERAPMCGVPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDVGG 207
++ ++ RLV G+KV + +Q E P +A G R + + T T A+ +
Sbjct: 63 SVDSYLNRLVEKGYKVAICEQVE-------DPQQAKGIVKREVVRVVTAGTNMNAQALDE 115
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
++ NY++C+V D R G+ ++STGD E + G
Sbjct: 116 TKN------NYIMCIV------------YIAD----RYGLAVADVSTGDYFVTELDSG-- 151
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEV- 326
R L+ + SP+E++ + ++ G L ++
Sbjct: 152 RKLLDEIH-KFSPSEIICNESF---------------------------YMSGLDLDDLR 183
Query: 327 ----MSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI----MNMPDLAVQALALTIRH 378
M +Y DT +++ + ++ H +++EG+ N +A AL +
Sbjct: 184 HRLGMMIY---SIDTHFFDDEMCARILKEHFHAASLEGMGLGDYNCGVIAAGALLKYLYE 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
++ L I + M L +++ + LE+ + G+LL +++ T T
Sbjct: 241 TQKTSLSHI----THITGYATGRYMLLDSSSRRNLELCETLREKQKRGSLLWVLDKTKTA 296
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G+R+LR ++ PL DR+ I RL+AV E+ D I +
Sbjct: 297 MGARMLRSYIEQPLIDRHEIEQRLEAVEEL--------------------KDKAISREEI 336
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HIDGEYRE 557
LS V D++R I+R+ +++A P + I+ + L+ L HI
Sbjct: 337 REYLSPVY-------DLERLISRVTYQSANPRDLISFRNS-------LEMLPHI------ 376
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQF 613
K +H LL+++ + +LL+ E A +G II +G
Sbjct: 377 KYILTEMHEELLQQI---CEELDTLEDLYQLLNESIMEEPPLAMKEGG-----IIKDGYD 428
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWA 671
++V R+A K L L R++ G+RNL+ + +E+ +K VP +
Sbjct: 429 ADVDMLRQAKTEGKNWLAQLEEEEREKTGIRNLKVKYNKVFGYYLEVTNAYKELVPDYYT 488
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + R+ +P + D + A ++L + + Q +A+A
Sbjct: 489 RKQTLANAERFITPRLKELEDTILGAEDKLYALEYTLYCKVRDRIASEVLRVQKTAKAVA 548
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAE 790
+D +LA ++ N+VRP +E I I GRHPV++ + DN F+ NDT L +
Sbjct: 549 KIDVFTSLALVAERNNYVRPKI---NEKGLIDIKGGRHPVVEKMTPDNMFIANDTLLDDK 605
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA SA + + D I+TR+GASD +
Sbjct: 606 KNRVSIITGPNMAGKSTYMRQSALIVLMAQIGSFVPADSANIGICDRIFTRVGASDDLAS 665
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM--- 907
G+STF+ E+ E + ILRN T+ SL+I+DE+GRGTST DG++IA+A +++ + +KK +
Sbjct: 666 GQSTFMVEMTEVANILRNATSSSLLILDEIGRGTSTFDGLSIAWAVVEH-ISNKKLLGAK 724
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ +++ K SV Y ++ + D+ +L K+V G ++ S
Sbjct: 725 TLFATHYHELTELEGKL-DSVNNYCIAV-----------KEQGDDIVFLRKIVKGGADKS 772
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQNRSAK 1007
+G +VA+LA +P S I+RA I +L EA+++++V+ SA+
Sbjct: 773 YGIQVAKLAGVPESVIARAKEIVGELSEADITTKVREISAQ 813
>gi|46126343|ref|XP_387725.1| hypothetical protein FG07549.1 [Gibberella zeae PH-1]
Length = 1210
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 252/932 (27%), Positives = 427/932 (45%), Gaps = 107/932 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K++P E Q ++K D ++ + G + + DA + + N +P
Sbjct: 326 KFSPFETQYWKIKQNLWDTIVFFKKGKFYELYENDATVGHQEFDFKMTDRVNMRMVGVPE 385
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKA-----HGPGKAGPF-GRGLSALYTKATLEA 201
L+ V + + +KV V Q ET K KA R L+ + T TL
Sbjct: 386 SSLDYWVNQFIAKQYKVARVDQMETNLGKEMRERQDKSKKADKIITRELACILTAGTL-- 443
Query: 202 AEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
V GG +D CV I+ V D G+ + +TG
Sbjct: 444 ---VDGGMLQDDMAS-----YCVA--------IKESVVDDL--PAFGIAFADTATGRFYL 485
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFI 318
F D + E ++ P ELL+ + LS + ++L P +
Sbjct: 486 SSFVDDVDLTKFETLIAQTGPRELLIEKSHLSTKALRILKNNTSPTTIWT-------HLK 538
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDV-PEQGNHRSAIEGIMNMPDLAVQALALTIR 377
G + + + +D + +V PE A++G+ + D+ + A I
Sbjct: 539 PGTEFWDADTTRRELNTANYFKTDDADEEVWPE------ALQGLRD-DDVIMSATGALIS 591
Query: 378 HLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
+L+ +E + +F + + + L TL LEV N+ NG GTL ++N
Sbjct: 592 YLRFLKVEGPLLSQGNFELYNPIQKNGTLILDGQTLINLEVFSNSVNGGSEGTLFSLLNK 651
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
+T +G RL R WV HPLC+ + I+ RLDAV + N+D T+
Sbjct: 652 CVTPFGKRLFRSWVAHPLCNIDRINERLDAVEML-------------------NADQTVR 692
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ-QLHIDG 553
E QF + L + PD++R I+RI P +F+ V++ +Q++ + + G
Sbjct: 693 E-QF-------ASQLVKMPDLERLISRIHAGACKPEDFVKVLEGF----EQIEYTMGLLG 740
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
Y+ + L+ RLI +S P + + + ++ A +L I G
Sbjct: 741 SYKG-------GNGLVDRLI--SSMPDLDEPLSYWRTAFDRNKARDEKIL---IPERGIE 788
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKV 673
+ ++ + K++L+ L+ +K+ + L+F V + +E P + KVP ++ ++
Sbjct: 789 DDFDQSSDRIDEIKQQLEDLLAEKKKEFKCKLLKFTHVGKEIYQLEAPKSVKVPSSFRQM 848
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
++TK RY+ P++ + +L A E + + R F ++F Y + +A++ ++ L
Sbjct: 849 SATKDVKRYYFPDLSQLVRELQEAEETHSQLVREVASRFFQKFDVDYDTWLSAIKIISQL 908
Query: 734 DCLHALA--TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAER 791
DCL +LA + S + RP FVD+ E + RHP + +D+F+PND L E+
Sbjct: 909 DCLVSLAKASASLGQPSCRPQFVDE-ERSTVDFQELRHPCM-MHNVDDFIPNDIKLGGEQ 966
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
++TG N GKS +R + IMAQ+G +VPA+ A L +D I +R+GA+D+I
Sbjct: 967 AKINLLTGANAAGKSTVLRMSCVAVIMAQIGCYVPATFARLTPVDRIMSRLGANDNIFAA 1026
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFV 911
+STF EL+E IL T +SLVI+DELGRGTS++DGVA+A A L ++ H C+ F
Sbjct: 1027 QSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGCVGYFA 1086
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY +A T+F + + ++ +D + ++ VT++YK+ GV+E SFG
Sbjct: 1087 THYHSLA---TEFENH------PEIRARRMQIHVD-EDERRVTFMYKLEDGVAEGSFGMH 1136
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
A + + I RA V A E E +SR+++
Sbjct: 1137 CAAMCGISSRVIDRAEVAAK--EWEHTSRMKD 1166
>gi|386346893|ref|YP_006045142.1| DNA mismatch repair protein mutS [Spirochaeta thermophila DSM 6578]
gi|339411860|gb|AEJ61425.1| DNA mismatch repair protein mutS [Spirochaeta thermophila DSM 6578]
Length = 867
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 265/919 (28%), Positives = 416/919 (45%), Gaps = 139/919 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP+ QQ E K +Y + +L +G + F +DA+ A+++LGI + IP
Sbjct: 6 TPMMQQYWEFKKRYREEILFFRLGDFYEMFADDAKEASRILGITLTQRNGIPMCGIPFHA 65
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGE 209
++ RL+ AG K+ + +Q E P K GRGL A E E + G
Sbjct: 66 AQNYIARLLRAGKKIAICEQVEV-------PEK----GRGL------ARREVIEVITPG- 107
Query: 210 DGCGGESNYLVCVVDDDGNVGKIRNGVF---GDGFDVRLGVVAVEISTGDVVYGEFNDGF 266
V D+ + K +N R+ + VE+STG+ + G F
Sbjct: 108 ------------TVTDEELLEKQKNNFLLAAAPAGKERVSLSCVELSTGEFLAGTAPGSF 155
Query: 267 LRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEV 326
L L +SP+EL+L P S E + + V F + +
Sbjct: 156 AEI-LARELARISPSELIL--PESAMEEPEIQKVLDAHGEIYVNRFPEWYFDPRTSFERL 212
Query: 327 MSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER 386
+ + ++ ED P+L +T L Q+ +
Sbjct: 213 VRHFRSVNLKAFGLEEDS--------------------PEL------ITAGPLLQYLEDT 246
Query: 387 IMCLGASFRSLSGSME---MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
L RS+ E + L T++ LE+++N +G E+ TL ++NHT T G+RL
Sbjct: 247 CHTLLPHVRSIHPYREEDALLLDETTIRNLELVKNIQDGGEHFTLYRVLNHTTTPMGARL 306
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LRRW+ +PL I ARL+AV + YR QH +L
Sbjct: 307 LRRWILYPLVAPADIEARLEAVEHL------YR-----DQH----------------LLQ 339
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHIDGEYREKVT 560
++ DI+R TR+ A + +A+ ++A A L + E +
Sbjct: 340 TLRKLFASMLDIERLATRVALDKAHAKDLLAIAGTIEAYEEAFALLSGI-------EAFS 392
Query: 561 SKTLHSALLKRLILTASS--PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
S L L + L A S PA++ A L+ N II G EV R
Sbjct: 393 SFLLPVDLFETLSTLADSLLPALMDNPATSLNEGN-------------IIREGYDPEVDR 439
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKVNST 676
R ++E LD + R++ G+ +L+ I + E+ AN VP + +
Sbjct: 440 CRTLRDHSQEILDRYLQEERERSGISSLKLKYNKVIGYFFEVTRANAHLVPSYFIPRQTL 499
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
+T R+ + ++ QLA A E L + R + + + A +++AA+DCL
Sbjct: 500 VQTQRFTTERLIELESQLAEAEERLVELERKIFMDLRERTKTHLEGLLALGKSVAAIDCL 559
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQ 795
+LA + + RPV + + + + GRHPV++ L +FVPND L R
Sbjct: 560 QSLAYAATRYGYTRPVLTTE---LVLDVKEGRHPVVEAHLPTGSFVPNDLLLDPPRRTLA 616
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNM GKS ++RQ ALI +MAQ+GSFVPA A + + D ++ R+GASD+I +G STF
Sbjct: 617 VITGPNMAGKSTFLRQNALIVLMAQMGSFVPAKEAVIGIADRLFCRVGASDNIARGESTF 676
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
L E+NE +YIL + T +S++I+DE+GRGT T DG++IA+A ++YLLE K LF TH+
Sbjct: 677 LVEMNETAYILHHATPRSVIIMDEVGRGTGTIDGLSIAWAVVEYLLERVKARTLFATHFH 736
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQ 974
++ TK T +++S M + D+D + +L +V G +E S+G VA+
Sbjct: 737 EL----TKITHP-AVFNLS----------MAVREDRDGIVFLKRVRAGAAEKSYGIHVAR 781
Query: 975 LAQLPPSCISRATVIAAKL 993
LA +P + + RA I L
Sbjct: 782 LAGVPEAVVKRARAIEEAL 800
>gi|452822105|gb|EME29128.1| DNA mismatch repair protein MutS [Galdieria sulphuraria]
Length = 1007
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 263/962 (27%), Positives = 447/962 (46%), Gaps = 143/962 (14%)
Query: 77 PTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--- 133
P+ + +NK +P+ + + K+++PD LL+ VG + F +DA++ A+ L +
Sbjct: 62 PSTYEKIDYNK-LSPMLRHYWDTKSEHPDYLLLYRVGDFYESFFDDAQILAETLEVTLTS 120
Query: 134 ----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GR 188
L + IP L+ ++ L+ KV V QTE A + +AG R
Sbjct: 121 KGGGKDLGCKVPMSGIPQHSLDKYLSILLKKNVKVAVCDQTEPATM-----AQAGSLVKR 175
Query: 189 GLSALYTKATLEAAEDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLG 246
++ L T TL ED ++NYL + D + K N V
Sbjct: 176 QVTRLLTPGTL--------TEDSMLDAKKNNYLAAIAVDMSSSTKEFN-------RVNWA 220
Query: 247 VVAVEISTGDV--VYGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQT-EKMLLAYAG 302
+ V+ STG+ + G+ D F+R L+ +SP+E+L+ P+ K ++ + Y
Sbjct: 221 IAYVDTSTGEFQGLEGKNIDAFIRE-----LIRISPSEVLMEDNPIWKNILQEQCITYQL 275
Query: 303 PASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
P C+ V S +G+ L Q H ++IE +
Sbjct: 276 PEL----------CYTA----RPVHSFDSQLGKQQLL-----------QRFHCNSIE-VF 309
Query: 363 NMPD--LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT-LSANTLQQLEVLRNN 419
+ D L ++A A I H Q +ERI + +F L + E L NTL+ LEVL
Sbjct: 310 GLKDSCLLLKACA-AIFHYLQETIERIAPINLNFFRLHRADEFVHLDENTLRNLEVLETL 368
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
G++ G+LL ++ T+T G+RLLRRW+ HPL D +++AR + + + +
Sbjct: 369 REGNKKGSLLWSVDRTVTCMGARLLRRWLLHPLRDGRILNARYEVIELLIQ--------- 419
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI 539
N D ILS ++ +L D++R RI A +F + +++
Sbjct: 420 --------NCD----------ILSGLVDTLKGFNDLERLACRIGSLRANEKDFYHLGESL 461
Query: 540 ------LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLI----------LTASSPAVIG 583
L+ +L ID + R + S L + LI +T SSP +
Sbjct: 462 KKIPRLLHILNRLISSSIDRQKRVVDLLAAILSPLSEELIQVIVEEIDANITLSSP--VS 519
Query: 584 KAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+ ++ ++ +++ + +G+ ++ K + + + RK+LG+
Sbjct: 520 TSPHVVDNFTGSNSE-----SVLFVQSGKNQQLEELEKEYKLHMQWMLEYERNERKRLGL 574
Query: 644 RNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
NL+ + + I + A KVP ++ + + RY + ++L + E L
Sbjct: 575 HNLKVGYHKSLGYYISISKRALSKVPNDYIRKQTLIGEERYTTTQLLERERSILYVRECL 634
Query: 702 TIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRP--VFVDDHEP 759
R +D+F Y Q +A+A LD LA ++ + + RP +DD E
Sbjct: 635 ASKEREIFDNFRNHLQQYAPSLQRIAEAVATLDVFCGLARMAMEREYCRPQLYLLDDEEK 694
Query: 760 ------VQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQV 812
V + I +GRHPV++ ++ +FV N +L + I+TGPN GKSCY+RQ+
Sbjct: 695 NSSSSAVVLKIENGRHPVVEQMISPGSFVSNSIDLSHQSSRLVILTGPNSSGKSCYLRQI 754
Query: 813 ALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQ 872
I ++AQ+GSFVPA A+L ++D I+TR+GA D I G+STF+ E+ E + ILR T
Sbjct: 755 GTIQLLAQIGSFVPAQEAQLSIMDAIFTRVGAVDDIGSGQSTFMVEMTETARILRQATKY 814
Query: 873 SLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYH 932
SLV++DE+GRGT+T DG++IA++ +YL + +C+ +F THY ++ ++ + F +
Sbjct: 815 SLVLLDEIGRGTTTLDGLSIAWSVAEYLSSNIQCLSIFATHYHEMNELASVFPWVIN--- 871
Query: 933 VSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAK 992
KV+ + D V +L+KV+PG + S+G +VA L+ LP + RA +
Sbjct: 872 ----LQVKVI-----EKDDQVIFLHKVIPGGANKSYGIQVAGLSGLPDVVVERARTVWRT 922
Query: 993 LE 994
LE
Sbjct: 923 LE 924
>gi|339443299|ref|YP_004709304.1| hypothetical protein CXIVA_22350 [Clostridium sp. SY8519]
gi|338902700|dbj|BAK48202.1| hypothetical protein CXIVA_22350 [Clostridium sp. SY8519]
Length = 888
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 265/954 (27%), Positives = 434/954 (45%), Gaps = 177/954 (18%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ + +E K +Y D +L +G + F EDAE+ ++ L G L+
Sbjct: 10 KVTPMMRVYLETKQQYSDCILFYRLGDFYEMFFEDAELVSRELELTLTGKSCGLEERAPM 69
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
IP ++ +LV AG KV + +Q E P A G R + + T T
Sbjct: 70 CGIPYHAYEGYLNKLVAAGHKVAICEQVE-------DPKTAKGLVKREVIRVVTPGT--- 119
Query: 202 AEDVGGGEDGCGGES--NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
G ES NY++C+V DG R G+ +I+T D +
Sbjct: 120 -----NLNPGALDESKNNYIMCIVYTDG----------------RYGISVADITTADYLV 158
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
E + R L+ + + P+E++ + S V +E S F
Sbjct: 159 TEVDTE--RRLLDEISKYM-PSEIICNESFY-------------MSGVDLEDLS---FRL 199
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRH 378
G L + S Y SN D ++ ++ H + ++G+ + V A +++
Sbjct: 200 GIQLNALDSWY-------FSN--DTTREILKEHFHVATLDGLGLGDYSCGVTAAGSLLKY 250
Query: 379 L---KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
L ++ G+ ++ S M + ++T + LE+ ++ G+LL +++ T
Sbjct: 251 LYETQKNGMTQL----TKIEPYSTGRYMVIDSSTRRNLELTETLREKNKRGSLLWVLDKT 306
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G+R LR ++ PL DR I+ RLDAV E+ ++M +G+ + + +
Sbjct: 307 KTAMGARTLRSYIEQPLIDRKEINQRLDAVEELKKNM--------IGREELRE----YLN 354
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
P + D++R I+RI ++ A P + IA +I
Sbjct: 355 PIY---------------DLERLISRIVYQNANPRDLIAFRNSI---------------- 383
Query: 556 REKVTSKTLHSALLK--RLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM------- 606
A+L R IL S +LL +N+ D DL +L+
Sbjct: 384 -----------AMLPPIREILKDFS-------CELLQQINQRMDDLSDLFSLIQASITED 425
Query: 607 ---------IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL 657
II G E R R A + L + +++ G+RNL +
Sbjct: 426 PPVSVREAGIIREGYSEEADRLRSARSDGRSWLARIEQEEKEKTGIRNLRIKYNKVFGYY 485
Query: 658 IELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
+E+ +++ VP + + + RY +PE+ + + A+++L + + +
Sbjct: 486 LEVTNSYRDLVPDYFIRKQTLTNAERYITPELKELEETILGASDKLNALEYDLFCEIRSK 545
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
G Q +A+A LD +LA ++ + +VRP +E I I GRHPV++ +
Sbjct: 546 IAGQVVRIQQTARAVAELDVFVSLAQVADSNGYVRPKI---NEKGSIRITEGRHPVVERM 602
Query: 776 LL-DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHV 834
+ D F+PND L IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA SA + +
Sbjct: 603 IRNDMFIPNDMTLDNHSNRIAIITGPNMAGKSTYMRQNALIVLMAQIGSFVPAKSASIGI 662
Query: 835 LDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAY 894
+D I+TR+GASD + G+STF+ E+ E + ILRN TA SL+I+DE+GRGTST DG+ IA+
Sbjct: 663 VDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATASSLLILDEIGRGTSTIDGLGIAW 722
Query: 895 ATLDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD 952
A ++Y+ K LF THY ++ +++ K +V Y V+ + K D D
Sbjct: 723 AVVEYISNPKLLGAKTLFATHYHELTELEGKL-DAVHNYCVA----------VREKGD-D 770
Query: 953 VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSA 1006
+ +L K+VPG ++ S+G +VA++A +P I RA I +LE S +QN +A
Sbjct: 771 IVFLRKIVPGGTDRSYGIQVAKIAGVPDPVIRRAKEICEELE---KSGLQNIAA 821
>gi|329121177|ref|ZP_08249805.1| DNA mismatch repair protein MutS [Dialister micraerophilus DSM 19965]
gi|327470259|gb|EGF15720.1| DNA mismatch repair protein MutS [Dialister micraerophilus DSM 19965]
Length = 852
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 246/956 (25%), Positives = 446/956 (46%), Gaps = 158/956 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMTAS 144
TPL Q +K KY D LL +G + F +DA E+ + G A +
Sbjct: 4 TPLMAQYQSIKDKYEDSLLFYRLGDFYELFYDDAKVVSHELELTLTGKSAGKEGRVPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P ++ RL+ G+KV V +Q E P KA G R + + T T+
Sbjct: 64 VPYHAAENYIYRLIQKGYKVAVCEQLEE-------PKKAKGLVKRDVIRVITPGTILFEN 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYL+ + ++ G + ++ +ISTG+ +G +N
Sbjct: 117 AIADKSN------NYLMYIYEEQGEIV----------------LILSDISTGECSWGIWN 154
Query: 264 DGFLRSGLEAVLLSLSPAELL--LGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ ++ P+E L + L ++T+ + G VR E
Sbjct: 155 AKKELYDMFDMISIYQPSETLCTISDELYEKTDYFFTSSVGGCLLVRKEYT--------- 205
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+E + DV N + +A L + +LK
Sbjct: 206 -------------------DEVKENDVIYSDNKK------------VQKAFLLLVEYLKD 234
Query: 382 FGLERIMCLGASFRSLSGSME---MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
+ F ++ E + LS T++ LE+ +N +G GTLL ++++T T
Sbjct: 235 V----MKSDSVKFHNIYKLREDHVLHLSEKTIRNLEITKNMRDGGRKGTLLELLDYTSTA 290
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL++W+ PL D N I R + + E+ + ES
Sbjct: 291 MGGRLLKKWLEQPLTDVNRIILRQNGIEELRTHATELQKLES------------------ 332
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
+ SS+ D +R + RI T +P + ++ ++A L K++ ++ +K
Sbjct: 333 --LFSSIF-------DFERILARIEANTTSPKDLLS-LKATL---KEIPEI-------KK 372
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
V S S +LK + + + + L ++N+ G + + I NG E+
Sbjct: 373 VLSGA-SSVILKNINSNIKTHKFVYEL--LDKSMNENGT--GSIRDGKYIKNGYSKELDE 427
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSG----ITHLIELPANFKVPLNWAKV 673
R +++++ + L +++ G++ + F ++ G ITH ++P +P + +
Sbjct: 428 VRSLAENSRKWITELEKSEKEKTGIKLKIGFNNIFGYYFEITHANKIP----IPEYYVRK 483
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY +PE+ ++ +A E+++ + + K+ Y AE Q + +A L
Sbjct: 484 QTLVNAERYITPELKEFEAKVLVAKEKMSELELELYKDIKKQIYPYIAEMQKTARTIAGL 543
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAERE 792
DCL LA + + +++PV ++ + I I GRHP+++ L + F+PND L+ +
Sbjct: 544 DCLSGLARAALKERYIKPV-IECSKNKHISINDGRHPMVEHALKNEMFIPNDIELNHANQ 602
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
+ITGPNM GKS ++RQVA++ IMAQ+GSF+PA SA + +D I+TR+GA+D I G+
Sbjct: 603 ELLVITGPNMAGKSTFMRQVAVLVIMAQIGSFIPAKSAVISPVDRIFTRVGATDDISTGQ 662
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF+ E+ E S+IL++ T SLV++DE+GRGTST+DG++IA A ++Y ++ LF T
Sbjct: 663 STFMVEMQEVSHILKHATENSLVLLDEIGRGTSTYDGMSIAKAVVEYFDKNIHAYTLFAT 722
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY +++D+ + + + + V+ + +++T+L ++VPG ++ S+G V
Sbjct: 723 HYHELSDMAST-SKKIKNFTVTV-----------KERGEEITFLRRIVPGCADRSYGIHV 770
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVS 1028
A+LA LP S + +A+ I LE++ N+S+ + ++ K+ E ++EN+ S
Sbjct: 771 ARLAGLPESLLKQASAILDNLESQ-----DNKSSNKKIMEKV---ENTSEENLFTS 818
>gi|307564801|ref|ZP_07627329.1| DNA mismatch repair protein MutS [Prevotella amnii CRIS 21A-A]
gi|307346523|gb|EFN91832.1| DNA mismatch repair protein MutS [Prevotella amnii CRIS 21A-A]
Length = 887
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 262/941 (27%), Positives = 438/941 (46%), Gaps = 154/941 (16%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----- 139
++K TP+ +Q +K K+PD LL+ G + + +DA AAK+LGI +N
Sbjct: 4 NDKGMTPMMKQFFSMKAKHPDALLLFRCGDFYETYHDDAIDAAKILGITLTKRNNSAGCS 63
Query: 140 -FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG--PFG----RGLS 191
A P L+ ++ +L+ AG +V + Q E K GK G P RG++
Sbjct: 64 DIAMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREEIKGKKGLSPMDKMVKRGIT 123
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
L T + ++V + E+N+L V + GK G+ ++
Sbjct: 124 ELVTPG-VALTDNVLNYK-----ENNFLAAV-----HFGK-----------QACGISFLD 161
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
ISTG+ + E +++ ++ S SP E+L + K E+ ++ C
Sbjct: 162 ISTGEFLTSEGTYDYVKK----LIGSFSPKEILYDRTCKKDFEQNF--------GTKLCC 209
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD---VPEQGNHRSAIEGIMNMPDLA 368
D ++ E +N + L + N+ V N A IM +L
Sbjct: 210 FEMDDWV----FTE-----QNANQKLLKHFATTNLKGFGVDHLHNGIIAAGAIMQYLELT 260
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT- 427
IRH+ + + + + T++ LE++ S +E GT
Sbjct: 261 QHT---QIRHI------------TALTRIEEEKYVRMDRFTIRSLELI---STINEEGTS 302
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL++++HT+T G R+LRRWV PL I RLD V + T
Sbjct: 303 LLNVIDHTITPMGGRMLRRWVVFPLKTVKTIEERLDIVDYFFKQQNFCET---------- 352
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGK 544
++ QF+ R D++R I+++ +P E + + ++AI+ +
Sbjct: 353 ------IQEQFH-----------RIGDLERIISKVAVGRVSPREVVQLKNALKAIIPVKE 395
Query: 545 QLQQLHIDGEYREKVTSK-TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
LH D + +++ + L +L R+ K + + ++G+
Sbjct: 396 AC--LHADNKVLKRIGEQLNLCESLRNRI-------------EKEIQNDPPQLTNKGN-- 438
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELP 661
II++G E+ R KE L + K+ G+ +L+ F +V G + +E+
Sbjct: 439 ---IIAHGYNQELDELRTIRDHGKEYLMKIQQQEAKRTGINSLKIGFNNVFG--YYLEVR 493
Query: 662 ANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
FK VP W + + + RY + E+ +++ A+E + I+ + + + +
Sbjct: 494 NTFKDSVPQEWIRKQTLAQAERYITQELKEYEEKILGADERILILENKLFLELINDMQEF 553
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-- 777
+ Q +A LDC+ + S+ N++RP+ VDD + I GRHPV++T L
Sbjct: 554 IPQIQINANLIAHLDCIFSFYYTSKEHNYIRPI-VDDSNILNIK--QGRHPVIETQLPLG 610
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
+ ++PND L+ + + +ITGPNM GKS +RQ ALI ++AQ+G FVPA SA + V+D
Sbjct: 611 EQYIPNDVLLNNDDQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAESATIGVVDK 670
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GASD+I G STF+ E+ EAS IL N T SLV+ DELGRGTST+DG++IA+A +
Sbjct: 671 IFTRVGASDNISLGESTFMVEMTEASNILNNVTPHSLVLFDELGRGTSTYDGISIAWAIV 730
Query: 898 DYLLEH--KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
+YL E K LF THY ++ +++ F G + Y+VS + + + +
Sbjct: 731 EYLHEQPRAKARTLFATHYHELNEMEKNFHG-IKNYNVSV-----------KEVNGKIIF 778
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
L K+ G SE SFG VA +A +P S + RA I ++LE++
Sbjct: 779 LRKLEKGGSEHSFGIHVADIAGMPRSIVKRAKTILSELESD 819
>gi|298373253|ref|ZP_06983242.1| DNA mismatch repair protein MutS [Bacteroidetes oral taxon 274 str.
F0058]
gi|298274305|gb|EFI15857.1| DNA mismatch repair protein MutS [Bacteroidetes oral taxon 274 str.
F0058]
Length = 896
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 262/919 (28%), Positives = 428/919 (46%), Gaps = 137/919 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASI---- 145
TPL +Q E+K KYPD LL+ VG + F EDA AA +LGI N A +
Sbjct: 31 TPLMKQHKEIKEKYPDALLLFRVGDFYETFAEDAVKAASILGITLTKRQNGAAAHVELAG 90
Query: 146 -PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V V Q E + RG++ L T
Sbjct: 91 FPHHALDTYLPKLVRAGLRVAVCDQLEDPKLTK------TLVKRGVTELVTPG------- 137
Query: 205 VGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
V ++ GE+N+L C V D N ++G+ ++ISTG+ +
Sbjct: 138 VSTNDNVLAVGENNFL-CAVHFDKN---------------QVGISFLDISTGEFYLSQ-- 179
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
G L E + S +P E+L + K E+ L P + E +D ++
Sbjct: 180 -GSLEYA-EKLFNSFAPKEVLYERKNRKLFEETL-----PTKIAKFE---QDDWVY---- 225
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
T+ + D+ E + + G+ ++ + A A+ + +L Q
Sbjct: 226 -------------TIESARDRLFKQFEVNSFKGF--GVEHLTCGIIAAGAI-LYYLDQTE 269
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
++I + R + GS + L T++ LE+L +S E+ TL +++ T GSRL
Sbjct: 270 HKQISHITKISR-IEGSHYVWLDRFTIRNLELL--DSPDDEHNTLFAVLDRNKTPMGSRL 326
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
+RRW+T PL + I+ RL V+ YR E +I+E
Sbjct: 327 MRRWLTFPLKEVKPITDRLSVVTHF------YRNPEQR----------SIIEE------- 363
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
SL + D++R ++++ P E +M A+ K ++ + K
Sbjct: 364 ----SLDKIGDLERILSKVAVGRINPREMWQLMTAL----KAIKPI------------KA 403
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIISNGQFSEVARARK 621
+ LI+ AS + + L+ + +E + L +I++G +E+ RK
Sbjct: 404 TCTETTDNLIM-ASFGEQLNECNTLIEKIKREIVEDPPATLAKGGVIASGVDAELDELRK 462
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKT 679
S K L ++ G+ +++ + IE+ K VP W + +
Sbjct: 463 ISSSGKSYLQQILERESAATGIPSMKINYNQVFGYYIEVTNAHKDKVPQTWIRRQTLTSA 522
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY + E+ ++ A E++ + + +++ + + A Q LA +DCL +
Sbjct: 523 ERYITEELKEYETKILGAEEKILSLEQRIFNALISSVSQFIATIQLDCNILAQIDCLLSF 582
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQII 797
+S+ + P+ D I I GRHPV++ L +++VPND L E + II
Sbjct: 583 TRISQENRYNCPIVNDS---TTIDIRQGRHPVIEKNLPIGESYVPNDILLDDENQQIIII 639
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS +RQ ALI +MAQ+G +VPA SA + ++D I+TR+GASD+I G STF+
Sbjct: 640 TGPNMAGKSALLRQTALIVLMAQIGCYVPAESASIGIVDKIFTRVGASDNIASGESTFMV 699
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM--VLFVTHYP 915
E+NEA+ IL N + +SL++ DELGRGTST+DG++IA+A ++Y+ E KC LF THY
Sbjct: 700 EMNEAASILNNISDRSLILFDELGRGTSTYDGISIAWAIVEYIHEMPKCRAKTLFATHYH 759
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ +++ + + Y+VS + D V ++ K+V G SE SFG VA++
Sbjct: 760 ELNEMERSYR-RIKNYNVSV-----------REVDGKVLFIRKLVRGGSEHSFGIHVAKI 807
Query: 976 AQLPPSCISRATVIAAKLE 994
A +PPS I RA I +LE
Sbjct: 808 AGMPPSVIKRADEILLQLE 826
>gi|409048502|gb|EKM57980.1| hypothetical protein PHACADRAFT_116507 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1277
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 273/968 (28%), Positives = 421/968 (43%), Gaps = 112/968 (11%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P +P P TL IP + K +TP E+Q E+K + D +L + G + ED
Sbjct: 333 PSEPGYDPRTLY-IPPKAW-----KAFTPFEKQFWEIKQNHFDTVLFFQKGKFLELYEED 386
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------- 173
A + + + +P N + + G+KVG V Q ETA
Sbjct: 387 ARIGHQEFDLKLTSRVKMSMVGVPEQNFNFWAAKFLAKGYKVGRVDQAETALGAEMRLAA 446
Query: 174 ----AIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNV 229
G R L+ +YT TL D D G + ++D
Sbjct: 447 DKGKTKAKAAAGADKIVRRELNKVYTNGTLV---DEALLTDDQAGHCVSIREEGEEDPKT 503
Query: 230 GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-P 288
GK + G+ ++ ST + F D R+ LE ++ L P E++ +
Sbjct: 504 GK-----------QKFGLCVLDSSTSEFNLSAFEDDICRTKLETMVRQLRPKEIVFTKGN 552
Query: 289 LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
+S T ++L A SN + + RDC G A + +L E L + + D
Sbjct: 553 ISVPTMRLLKAIL--PSNC-LWTSLRDC-EGLSFDATIKALKE------LYPSSLDDDDD 602
Query: 349 PEQGNH---RSAIEGIMNMP--DLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGS 400
E H +S E I+NM + AV+AL I +L+ + + +F +
Sbjct: 603 LEPRPHSLSKSVPEAILNMVRYEGAVEALGSMIWYLRTLNIGNDILSMKNFNVYDPMKRG 662
Query: 401 MEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISA 460
+ L TL +EVL N S G+E G+LL +++ +T G RL R W+ PL D I+A
Sbjct: 663 QGLVLDGQTLAHIEVLVN-SEGTEDGSLLKLLSQCITPSGKRLFRIWLCMPLRDIADINA 721
Query: 461 RLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGIT 520
RLDAV ++ I P F + V LG D++R ++
Sbjct: 722 RLDAVQDL------------------------IDHPTFEAEFNEVAKGLG---DLERIVS 754
Query: 521 RIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPA 580
R+ + +F+ V+ + K L L + E S+T+ L+ +A A
Sbjct: 755 RVHAKNCKVKDFLKVLDSFKTLSKGLSAL---ADTAEGFKSRTVFG-----LLRSAPDLA 806
Query: 581 VIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQ 640
K K + + E +D+ ++ G+ E + + + L++ + K+
Sbjct: 807 PHIKNVKAMFEIT-EGSDE------LMPREGKDEEYDSVMEEINELERTLETELKKLEKK 859
Query: 641 LGMRNLEFMSVSGIT--HLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALAN 698
LG++ + S G +L++ N VP +W K STK R+ PE+ + L A
Sbjct: 860 LGIKLSYWHSAQGTKEIYLVQTKPNEDVPRSWTKSGSTKAAARWTVPELAPTIRSLKEAR 919
Query: 699 EELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA--TLSRNKNFVRPVFVDD 756
E ++ EF + + AV+ L+ LDCL +LA +++ + RP V
Sbjct: 920 ENRNTAIKSFKHRVYAEFDKDRSVWLRAVRVLSELDCLFSLAKASVALGEPACRPELVAG 979
Query: 757 HEPVQIHICSGRHPVLDTI--LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
E + RHP L +F+PND L ++TGPNMGGKS +R A
Sbjct: 980 DEAF-VDFEELRHPALSVSAGFKGDFIPNDVKLGENVGRIVLLTGPNMGGKSTAMRMTAA 1038
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
IMAQ+G FVPA A+L +D I TRMGA D++ STF EL+E ILR T +SL
Sbjct: 1039 GVIMAQLGMFVPAKRAKLCPVDAILTRMGAYDNMFSNASTFKVELDECCKILREATPRSL 1098
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVS 934
VI+DELGRGTST+DG+AIA A L L H + F THY + D YH +
Sbjct: 1099 VILDELGRGTSTYDGMAIAGAVLHQLATHTLSLSFFATHYGSLTDDY--------AYHPN 1150
Query: 935 YLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
H M ++++ +LYK+V GV+ SSFG VA LA +P I RA +++
Sbjct: 1151 IRNMH--MATHVDDENRELIFLYKLVEGVASSSFGTHVANLAGVPQEVIQRAEIVSDNFA 1208
Query: 995 AEVSSRVQ 1002
+ +++
Sbjct: 1209 KQFKEKME 1216
>gi|426223707|ref|XP_004023308.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6
[Ovis aries]
Length = 1352
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 262/980 (26%), Positives = 434/980 (44%), Gaps = 126/980 (12%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP ++ ++K++ D+++ +VG + + DA + LG+ + N+ + P
Sbjct: 398 TPGMRKWWQIKSQNFDLVIFYKVGKFYELYRRDALIGVSELGL-VFMKGNWAHSGFPEIA 456
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIK-------AHGPGKAGPFGRGLSALYTKATLEAA 202
+ LV G+KV V+QTET + AH R + + TK T +
Sbjct: 457 FGRYSDSLVQKGYKVARVEQTETPDMMEARCRKMAHTSKYDRVVMREICRVITKGTQTYS 516
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
G D S YL+ + + + G GV V+ S G G+F
Sbjct: 517 VLEG---DPSENYSKYLLSLKEKEEE---------SSGHTRVYGVCFVDTSLGRFFIGQF 564
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+D S ++ P ++L + LS +T KM+L + + + ++ I G
Sbjct: 565 SDDRHCSRFRTLVAHYPPVQVLFEKGNLSTET-KMILKSSLSS-------SLQEGLIPGS 616
Query: 322 ALAEVMSLYENMGED---TLSNNEDQNMDVPEQGNHRSAIEGIMNM-----PDLAVQALA 373
+ + E+ T NED + +P+ +A + + +LA+ AL
Sbjct: 617 QFWDAAKTLRTLLEEGYFTDKLNEDGGVMLPQVLKGMTAESDSIGLTPGEKSELALSALG 676
Query: 374 LTIRHLKQFGLERIMCLGASFRSL------------------SGSMEMTLSANTLQQLEV 415
+ +LK+ +++ + A+F + M L A TL LE+
Sbjct: 677 GCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHATRPGAVFTKANQRMVLDAVTLSNLEI 736
Query: 416 LRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSY 475
N +NGS GTLL ++ T +G RLL++W+ PLC+ + I+ RLDA+
Sbjct: 737 FLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPHAINDRLDAIE--------- 787
Query: 476 RTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP--SEFI 533
D+ +V + +S V+ L + PD++R +++I H +P S+
Sbjct: 788 --------------DLMVVPDK----ISEVVDLLKKLPDLERLLSKI-HNVGSPLKSQNH 828
Query: 534 AVMQAILYAGKQLQQLHIDGEYRE----KVTSKTL----------HSALLKRLILTASSP 579
+AI+Y + I KV K + S +LK+ +LT +
Sbjct: 829 PDSRAIMYEETTYSKKKIIDFLSALEGFKVICKVIGVMEEVIDDFKSKILKQ-VLTLQTK 887
Query: 580 AVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLIN 635
G+ L S +N+ ++ L+ G S+ +A ++ ++ L +
Sbjct: 888 NPEGRFPDLTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLE 947
Query: 636 MCRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYHSPEVLTALD 692
R ++G R + + + + +E+P NF +P + ++ K RY + + L
Sbjct: 948 KQRSRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLA 1007
Query: 693 QLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN--FVR 750
L A E + F Y ++QAAV+ +A LD L L SR + R
Sbjct: 1008 DLIKAEERRDTSLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLTNYSRGGDGPMCR 1067
Query: 751 PVFV--DDHEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAE-------REYCQIITGP 800
P+ + ++ P + + RHP + T D+F+PND + E + YC ++TGP
Sbjct: 1068 PIILLPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAYCVLVTGP 1127
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS +RQ L+ IMAQ+G +VPA L +D ++TR+GASD I G STF EL+
Sbjct: 1128 NMGGKSTLMRQAGLLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELS 1187
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK-IAD 919
E + IL + TA SLV+VDELGRGT+T DG AIA A + L E+ KC LF THY + D
Sbjct: 1188 ETASILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVED 1247
Query: 920 IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLP 979
+G H++ + ++ P S + +T+LYK + G S+GF A+LA LP
Sbjct: 1248 YSQNIAVRLG--HMACMVENECEDP----SQETITFLYKFIKGACPKSYGFNAARLANLP 1301
Query: 980 PSCISRATVIAAKLEAEVSS 999
I + A + E S
Sbjct: 1302 EEVIQKGHRKAREFEKMTQS 1321
>gi|383787109|ref|YP_005471678.1| DNA mismatch repair protein MutS [Fervidobacterium pennivorans DSM
9078]
gi|383109956|gb|AFG35559.1| DNA mismatch repair protein MutS [Fervidobacterium pennivorans DSM
9078]
Length = 829
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 250/906 (27%), Positives = 412/906 (45%), Gaps = 141/906 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP+ +Q +++K KY D +L+ +G + F +DA + +KVL I A IP
Sbjct: 21 KLTPMMKQYLDIKKKYQDSILLFRLGDFYEAFFDDALVVSKVLNIVLTKRQEAPMAGIPY 80
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
L+ ++++LV+ G+KV + +Q E A G R ++ + T TL ED
Sbjct: 81 HALDNYLKKLVDGGYKVAICEQMEDPATAK------GIVKREVTRVITPGTL--IED--- 129
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
+ +NY+ V + L V + STGDV+ +F++
Sbjct: 130 --ELLTTSNNYMASVYETKAG---------------ELYTVLTDTSTGDVIVKKFDN--- 169
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE + E+ Q + ++ Y +++ D + G + +
Sbjct: 170 ---LEEFYDFVETHEI--SQIICPES-----LYPKLKDRIKIFIDRLDDWYYTGTIDAIK 219
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
Y G T+ + E P L TI++L + L +
Sbjct: 220 EAY---GLATIEHFELGEAHYP----------------------LGATIKYL-NYTLNKQ 253
Query: 388 MCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRW 447
L A R L S+ M L ++T++ L ++ G L ++N T T G+RLL+
Sbjct: 254 AKLKAP-RVLDESIYMVLDSSTIENLSLI----PGERGKNLFDVLNKTKTPMGARLLKWI 308
Query: 448 VTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLT 507
+ HPL DR I R D VS E T++ + L V
Sbjct: 309 ILHPLKDRKAIEKRHDMVSAFFED--------------------TLLTNEIREYLDGVY- 347
Query: 508 SLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSA 567
D++R I R+ + +A P + I++ L + RE + S +
Sbjct: 348 ------DLERIINRLQYDSAKPKDLISLKNT----------LEVIEPLREALESNENLIS 391
Query: 568 LLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAK 627
L++ L P + K+ +T+N E +GDL II G E+ R+ + +
Sbjct: 392 LVEEL------PDLSVVKEKIQNTLNDEI--EGDLGEGKIIREGVSKELDEYRELLYHSN 443
Query: 628 EELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPA--NFKVPLNWAKVNSTKKTIRYH 683
E+L R + G++ L+ F +V G + IE+P P ++ ++ + RY
Sbjct: 444 EKLKEFEETERIRTGIQKLKVGFNNVFG--YYIEIPKGQTKNAPEDYTRLQTLVNAERYT 501
Query: 684 SPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLS 743
+P++ ++ A E + + + + + E Y + + LA +D + A ++
Sbjct: 502 NPKLKEFEQKILAAKERVEELEKLIFANLCDELKTYTEALRKTSETLAWIDIYTSFAYIA 561
Query: 744 RNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMG 803
R ++RPV + + I GRHPV++ ++ FVPNDT + E I+TGPNM
Sbjct: 562 RLYGYIRPVLSNG----EFEILQGRHPVVER-FVNEFVPNDTYMD-ENLRMYILTGPNMS 615
Query: 804 GKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEAS 863
GKS YIRQ+ LI +M+Q+GSFVPA+ A++ V D I+TRMGA D I G+STFL E++E +
Sbjct: 616 GKSTYIRQIGLIALMSQIGSFVPANFAKIPVFDRIFTRMGARDDISTGKSTFLTEMSEVA 675
Query: 864 YILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTK 923
IL T SLV++DE+GRGTST DG++IA+A +Y+ KC +F TH+ ++ ++
Sbjct: 676 LILNKATENSLVLLDEVGRGTSTFDGISIAWAISEYIYNEVKCKTVFATHFTELTELADM 735
Query: 924 FTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCI 983
+ G + LT P V +L+KVV GV++ S+G +VA +A LP S +
Sbjct: 736 YPG------IKNLTIEVRETP------DGVIFLHKVVEGVADRSYGIEVAAIAGLPQSIV 783
Query: 984 SRATVI 989
RA I
Sbjct: 784 ERAKEI 789
>gi|392348628|ref|XP_002729643.2| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus norvegicus]
Length = 1361
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 262/974 (26%), Positives = 432/974 (44%), Gaps = 126/974 (12%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP ++ + K++ D+++ +VG + + DA + LG+ + N+ + P
Sbjct: 409 TPGMRRWWQFKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLI-FMKGNWAHSGFPEIA 467
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIK-------AHGPGKAGPFGRGLSALYTKATLEAA 202
LV G+KV V+QTET + AH R + + TK T +
Sbjct: 468 FGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTYS 527
Query: 203 EDVGGGEDGCGGESNYLVCVVD-DDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
G D S YL+ + + ++ + G +R GV V+ S G G+
Sbjct: 528 VLDG---DPSENYSRYLLSLKEKEEDSSGHMRA----------YGVCFVDTSLGKFFLGQ 574
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
F+D S L ++ P ++L + LS +T+ +L Y C G
Sbjct: 575 FSDDRHCSRLRTLVAHYPPVQILFEKGNLSTETKTVLKGYWS-------SCLQEGLIPGS 627
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVP---EQGNHRSAIEGIM--NMPDLAVQALALT 375
+L + + NE ++P + S G+ +L++ AL
Sbjct: 628 QFWDATKTLRTLLEGGYFTGNEGSGAELPPVLKAMTSESDSVGLTPGEESELSLSALGGC 687
Query: 376 IRHLKQFGLERIMCLGASFRSL------------------SGSMEMTLSANTLQQLEVLR 417
+ +LK+ +++ + A+F S M L A TL LE+
Sbjct: 688 VFYLKKCLIDQELLSMANFEEYFPLDSDMVGTVKPGAVFTKASQRMVLDAVTLSNLEIFL 747
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N +NGS GTLL ++ T +G RLL++W+ PLC + IS RLDA+ ++
Sbjct: 748 NGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAIEDL--------- 798
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP--SEFIAV 535
+ P ++ +L L PD++R +++I H +P S+
Sbjct: 799 ---------------MAVPDKVAEVADLLKKL---PDLERLLSKI-HNVGSPLKSQNHPD 839
Query: 536 MQAILYAGKQLQQLHI-------DG-EYREKVT------SKTLHSALLKRLI-LTASSPA 580
+AI+Y + I +G + K+T + S LK+++ L SP
Sbjct: 840 TRAIMYEETTYSKKKIIDFLSALEGFKVMCKITRLMEDVADGFKSKTLKQVVTLQTKSPK 899
Query: 581 VIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
G+ L + +N+ ++ L+ G S+ +A ++ ++ L ++
Sbjct: 900 --GRFPDLTAELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDK 957
Query: 637 CRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQ 693
R ++G RN+ + + + +E+P NF +P + ++ K RY + + L
Sbjct: 958 QRSRIGCRNIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKVIEKKLSN 1017
Query: 694 LALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN--FVRP 751
L A E + F + ++Q+AV+ A LD L LA+ S+ + RP
Sbjct: 1018 LINAEERRDASLKDCMRRLFYNFDKNHKDWQSAVECTAVLDVLLCLASYSQGGDGPMCRP 1077
Query: 752 VFV---DDHEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAERE-------YCQIITGP 800
V + +D P + + RHP + T D+F+PND + E + YC ++TGP
Sbjct: 1078 VLLLPGEDTHPF-LELKGSRHPCITKTFFGDDFIPNDILIGCEEDAEADGKAYCVLVTGP 1136
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS IRQ L+ +MAQ+G +VPA L +D ++TR+GASD I G STF EL+
Sbjct: 1137 NMGGKSTLIRQAGLLAVMAQMGCYVPAELCRLTPVDRVFTRLGASDRIMSGESTFFVELS 1196
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
E + ILR+ TA SLV+VDELGRGT+T DG AIA A + L E KC LF THY + +
Sbjct: 1197 ETASILRHATAHSLVLVDELGRGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVED 1256
Query: 921 KTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPP 980
+K V H++ + ++ P S + +T+LYK + G S+GF A+LA LP
Sbjct: 1257 YSKNV-CVRLGHMACMVENECEDP----SQETITFLYKFIKGACPKSYGFNAARLANLPE 1311
Query: 981 SCISRATVIAAKLE 994
I + A + E
Sbjct: 1312 EVIQKGHRKAREFE 1325
>gi|398365559|ref|NP_010382.3| mismatch repair ATPase MSH6 [Saccharomyces cerevisiae S288c]
gi|3024187|sp|Q03834.1|MSH6_YEAST RecName: Full=DNA mismatch repair protein MSH6; AltName: Full=MutS
protein homolog 6; AltName: Full=Postmeiotic segregation
protein 3
gi|633631|emb|CAA87671.1| probable DNA repair protein [Saccharomyces cerevisiae]
gi|285811118|tpg|DAA11942.1| TPA: mismatch repair ATPase MSH6 [Saccharomyces cerevisiae S288c]
Length = 1242
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 266/1030 (25%), Positives = 444/1030 (43%), Gaps = 151/1030 (14%)
Query: 7 QVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKKP 66
Q SR + P +Q +A+S +S + + V A+R+ PK+ P
Sbjct: 247 QAPSRSYNPSHSQPSATSKSSKFNKQNE---ERYQWLVDERDAQRR-------PKS--DP 294
Query: 67 KLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMA 126
+ P TL IP+ + K+TP E+Q E+K+K D ++ + G F + +DA +A
Sbjct: 295 EYDPRTLY-IPSSAWN-----KFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDALLA 348
Query: 127 AKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
+ L I N A IP + + G+KV V Q E+ K G G
Sbjct: 349 NALFDLKIAGGGRANMQLAGIPEMSFEYWAAQFIQMGYKVAKVDQRESMLAKEMREGSKG 408
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN------------VGKI 232
R L + T TL G+ + + + + ++ GN V K+
Sbjct: 409 IVKRELQCILTSGTL------TDGDMLHSDLATFCLAIREEPGNFYNETQLDSSTIVQKL 462
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSK 291
+FG F ++ +TG++ EF D + L+ ++ + P E+++ + LS
Sbjct: 463 NTKIFGAAF--------IDTATGELQMLEFEDDSECTKLDTLMSQVRPMEVVMERNNLST 514
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSL-YENMGED---TLSNNEDQNMD 347
K++ + P + A + + AE++S Y + ED L + D
Sbjct: 515 LANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEIISSEYFSTEEDWPEVLKSYYDTGKK 574
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALAL-TIRHLKQFGLERIMCLGASFRSLSGSMEMTLS 406
V SA G++ L +++++K++ + M L
Sbjct: 575 V-----GFSAFGGLLYYLKWLKLDKNLISMKNIKEYDF------------VKSQHSMVLD 617
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TLQ LE+ N+ +GS+ GTL + N +T G R++++W+ HPL +N I +RLD+V
Sbjct: 618 GITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGKRMMKKWLMHPLLRKNDIESRLDSVD 677
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
+ + D+T+ E + + + PD++R + RI RT
Sbjct: 678 SLLQ-------------------DITLRE--------QLEITFSKLPDLERMLARIHSRT 710
Query: 527 ATPSEF---IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIG 583
+F I + I+ L+ + G+ + + +S P +
Sbjct: 711 IKVKDFEKVITAFETIIELQDSLKNNDLKGDVSKYI----------------SSFPEGLV 754
Query: 584 KAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+A K S N + N+++ G E ++ +Q ++EL ++ RKQ
Sbjct: 755 EAVK--SWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELMEILMTYRKQFKC 812
Query: 644 RNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
N+++ + IE+P A VP NW ++ + K RY+S EV +A A E
Sbjct: 813 SNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEVRALARSMAEAKEIH 872
Query: 702 TIVCRAAWDSFLKEFGGYYAE-FQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHE 758
+ + ++F +Y + +QA++ +DCL A+ S RP VD+ +
Sbjct: 873 KTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYLGAPSCRPTIVDEVD 932
Query: 759 PVQ-------IHICSGRHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
+ S RHP L +F+PND L E+ ++TG N GKS +
Sbjct: 933 SKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKEQPRLGLLTGANAAGKSTIL 992
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
R + IMAQ+G +VP SA L +D I TR+GA+D+I QG+STF EL E IL
Sbjct: 993 RMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKSTFFVELAETKKILDMA 1052
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG 929
T +SL++VDELGRG S+ DG AIA + L ++ H + + F THY +A
Sbjct: 1053 TNRSLLVVDELGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLA----------- 1101
Query: 930 TYHVSYLTSHKVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCIS 984
S H + P+ ++ ++VT+LYK++ G SE SFG VA + + I
Sbjct: 1102 ----SSFKHHPQVRPLKMSILVDEATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIID 1157
Query: 985 RATVIAAKLE 994
A + A LE
Sbjct: 1158 NAQIAADNLE 1167
>gi|408389823|gb|EKJ69247.1| hypothetical protein FPSE_10585 [Fusarium pseudograminearum CS3096]
Length = 1210
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 251/932 (26%), Positives = 428/932 (45%), Gaps = 107/932 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K++P E Q ++K D ++ + G + + DA + + N +P
Sbjct: 326 KFSPFETQYWKIKQNLWDTIVFFKKGKFYELYENDATVGHQEFDFKMTDRVNMRMVGVPE 385
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKA-----HGPGKAGPF-GRGLSALYTKATLEA 201
L+ V + + +KV V Q ET K KA R L+ + T TL
Sbjct: 386 SSLDYWVNQFIAKQYKVARVDQMETNLGKEMRERQDKSKKADKIITRELACILTAGTL-- 443
Query: 202 AEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
V GG +D CV I+ V D G+ + +TG
Sbjct: 444 ---VDGGMLQDDMAS-----YCVA--------IKESVVDDL--PAFGIAFADTATGRFYL 485
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFI 318
F D + E ++ P ELL+ + LS + ++L P + +
Sbjct: 486 SSFVDDVDLTKFETLIAQTGPRELLIEKSHLSTKALRILKNNTSP-TTIWTHLKP----- 539
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDV-PEQGNHRSAIEGIMNMPDLAVQALALTIR 377
G + + + +D + +V PE A++G+ + D+ + A I
Sbjct: 540 -GTEFWDADTTRRELNTANYFKTDDADEEVWPE------ALQGLRD-DDVIMSATGALIS 591
Query: 378 HLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
+L+ +E + +F + + + L TL LEV N+ NG GTL ++N
Sbjct: 592 YLRFLKVEGPLLSQGNFELYNPIQKNGTLILDGQTLINLEVFSNSVNGGSEGTLFSLLNK 651
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
+T +G RL R WV HPLC+ + I+ RLDAV + N+D T+
Sbjct: 652 CVTPFGKRLFRSWVAHPLCNIDRINERLDAVEML-------------------NADQTVR 692
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ-QLHIDG 553
E QF + L + PD++R I+RI P +F+ V++ +Q++ + + G
Sbjct: 693 E-QF-------ASQLVKMPDLERLISRIHAGACKPEDFVKVLEGF----EQIEYTMGLLG 740
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
Y+ + L+ RLI +S P + + + ++ A +L I G
Sbjct: 741 SYKG-------GNGLVDRLI--SSMPDLDEPLSYWRTAFDRNKARDEKIL---IPERGIE 788
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKV 673
+ ++ + K++L+ L+ +K+ + L+F V + +E P + KVP ++ ++
Sbjct: 789 DDFDQSSDRIDEIKQQLEDLLAEKKKEFKCKLLKFTHVGKEIYQLEAPKSVKVPSSFRQM 848
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
++TK RY+ P++ + +L A E + + R F ++F Y + +A++ ++ L
Sbjct: 849 SATKDVKRYYFPDLSQLVRELQEAEETHSQLVREVASRFFQKFDVDYDTWLSAIKIISQL 908
Query: 734 DCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAER 791
DCL +LA S + + RP FVD+ E + RHP + +D+F+PND L ++
Sbjct: 909 DCLVSLAKASASLGQPSCRPQFVDE-ERSTVDFQELRHPCM-MHNVDDFIPNDIKLGGDQ 966
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
++TG N GKS +R + IMAQ+G +VPA+ A L +D I +R+GA+D+I
Sbjct: 967 AKINLLTGANAAGKSTVLRMSCVAVIMAQIGCYVPATFARLTPVDRIMSRLGANDNIFAA 1026
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFV 911
+STF EL+E IL T +SLVI+DELGRGTS++DGVA+A A L ++ H C+ F
Sbjct: 1027 QSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGCVGYFA 1086
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY +A T+F + + ++ +D + ++ VT++YK+ GV+E SFG
Sbjct: 1087 THYHSLA---TEFENH------PEIRARRMQIHVD-EDERRVTFMYKLEDGVAEGSFGMH 1136
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
A + + I RA V A E E +SR+++
Sbjct: 1137 CAAMCGISSRVIDRAEVAAK--EWEHTSRLKD 1166
>gi|282858637|ref|ZP_06267795.1| DNA mismatch repair protein MutS [Prevotella bivia JCVIHMP010]
gi|282588555|gb|EFB93702.1| DNA mismatch repair protein MutS [Prevotella bivia JCVIHMP010]
Length = 889
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 277/964 (28%), Positives = 451/964 (46%), Gaps = 147/964 (15%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------F 140
K TP+ +Q +K K+PD LL+ G + + +DA AAKVLGI +N
Sbjct: 6 KGMTPMMKQFFSMKAKHPDALLLFRCGDFYETYHDDAIDAAKVLGITLTKRNNGGNSGEI 65
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG--PFG----RGLSAL 193
A P L+ ++ +L+ AG +V + Q E K GK G P RG++ L
Sbjct: 66 AMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREELKGKKGLSPMDKMVKRGITEL 125
Query: 194 YTKATLEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
T V G++ E+N+L V + GK GV ++I
Sbjct: 126 VTPG-------VAMGDNVLNYKENNFLAAV-----HFGK-----------QACGVSFLDI 162
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E ++ S SP E+L + K+ E ++
Sbjct: 163 STGEFLTGEGTYDYV----EKLIGSFSPKEILYDRAYKKEFETHF--------GTKLCTF 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D ++ A L ++ G L + V N A IM +L
Sbjct: 211 EMDDWVFTEQTAN-QKLLKHFGTANL-----KGFGVDHLHNGIIAAGAIMQYLELTQHT- 263
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
IRH+ + + + + T++ LE++ ++ E +LL+++
Sbjct: 264 --QIRHI------------TALTRIEEEKYVRMDRFTIRSLELV--STMNDEGTSLLNVI 307
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
++T+T G R+LRRW+ PL I RLD V E +H + +
Sbjct: 308 DNTITPMGGRMLRRWMVFPLKTVKPIEERLDVV-------------EYFFKHQDFRDTIN 354
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
QF+ R D++R I+++ +P E + + A+ K +Q +
Sbjct: 355 ---EQFH-----------RIGDLERIISKVAVGRVSPREVVQLKNAL----KAIQPVKTS 396
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
Y E +K L+ + ++L L S + + + + + A++GD II+ G
Sbjct: 397 CLYAE---NKVLNR-IGEQLNLCES---LRNRIEQEIQNDPPQLANKGD-----IIAFGY 444
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFK--VPL 668
E+ R KE L + ++ G+ +L+ F +V G + +E+ FK VP
Sbjct: 445 NQELDELRTIRDHGKEYLLQIQEREAERTGINSLKVGFNNVFG--YYLEVRNTFKDNVPE 502
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
W + + + RY + E+ D++ A+E + + + +++ + + Q
Sbjct: 503 EWVRKQTLAQAERYITQELKEYEDKILGADERILALEGKLFMELIRDMQEFIPQIQINAT 562
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTN 786
+A LDCL + S ++VRPV VDD E + I GRHPV++T L + +VPND
Sbjct: 563 LVAHLDCLLSFTRASEEHHYVRPV-VDDSEVLDIK--QGRHPVIETQLPLGEQYVPNDVL 619
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L +R+ +ITGPNM GKS +RQ ALI ++AQ+G FVPA A + ++D I+TR+GASD
Sbjct: 620 LDNDRQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAERARVGLVDKIFTRVGASD 679
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--K 904
+I G STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA+A ++YL E
Sbjct: 680 NISVGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPRA 739
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
K LF THY ++ +++ F G + Y+VS + + + +L K+ G S
Sbjct: 740 KARTLFATHYHELNEMEKNFHG-IKNYNVSV-----------KEVNGKIIFLRKLEKGGS 787
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQEN 1024
E SFG VA +A +P S + RA VI ++LEA+ Q SA + + KL ++++E
Sbjct: 788 EHSFGIHVADIAGMPRSIVKRANVILSELEAD---NAQVGSAGKTAIGKL----EQSREG 840
Query: 1025 MPVS 1028
M +S
Sbjct: 841 MQLS 844
>gi|260424691|ref|ZP_05732975.2| DNA mismatch repair protein MutS [Dialister invisus DSM 15470]
gi|260402860|gb|EEW96407.1| DNA mismatch repair protein MutS [Dialister invisus DSM 15470]
Length = 855
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 266/923 (28%), Positives = 421/923 (45%), Gaps = 147/923 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMTAS 144
+PL +Q +K ++ D L +G + F +DA E+ + G A +
Sbjct: 8 SPLMEQYKSIKNEHKDAFLFYRLGDFYELFYDDAVTVSHELELTLTGKNAGPEGRVPMCG 67
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
IP ++ RLV G+KV + +Q E P KA G R + + T T+
Sbjct: 68 IPYHAAETYIYRLVQKGYKVAICEQLE-------DPKKAKGLVKRDVIRIVTPGTILFEN 120
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYL + + D ++ + V D ISTG+ +G ++
Sbjct: 121 SIADKSN------NYLAYLYETDNDI----DAVLAD------------ISTGECWWGIWD 158
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
R +L +P E + LS L AY C +R +GG L
Sbjct: 159 KKKEREAFFDMLSVYAPTEAVCS--LSDNFYGRLEAY----------CRAR---LGGCLL 203
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
E+ + VP H + G N+ + A +LK
Sbjct: 204 TR--------------RGEEGDYPVP----HVAEALGDENIRCV----FAWLAAYLK--- 238
Query: 384 LERIMCLGASFRSLSGSME---MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
E + A F ++ E + L + L+ LE+ RN +G GTLL I++HT T G
Sbjct: 239 -EMMKADAAEFHTVMPIREEDCLLLGEDCLRNLEITRNMRDGGRRGTLLEILDHTHTAMG 297
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+RLLRRW+ PL D N I R D + E+ G E
Sbjct: 298 ARLLRRWLERPLTDVNRIIQRQDGIEEL------------TGHTTE-------------- 331
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
LS + L D +R +TRI T +P + +A ++A L +++ K+
Sbjct: 332 -LSQLEEMLEHVFDFERILTRIEANTTSPKDLLA-LKASLGMIPEIK----------KLL 379
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
S T+ S +L++L + + +LL E G++ + I G +E+ R
Sbjct: 380 SGTV-SIVLRKL---SDQMDIHSTVYELLDRSMNENG-TGNIRDGKYIKEGYSAELDEVR 434
Query: 621 KAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKT 679
+++++ + L +++ G++ + F +V G I +P + + +
Sbjct: 435 SLSENSRKWIADLEEREKEKTGIKLKIGFNNVFGYYFEITNANKVPIPEYYMRKQTLVNA 494
Query: 680 IRYHSPEVLTALDQLALA----NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY +PE L + AL+ EEL + A + ++ A Q +ALAALDC
Sbjct: 495 ERYITPE-LKEFETKALSAKEKTEELELKIYQAVKAAIRP---EIAAMQRTAKALAALDC 550
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYC 794
L L+ + +VRP + E +I I GRHP+++ L + FVPNDT L+ +
Sbjct: 551 LTGLSRAALKDRYVRPQITNSREG-RISIHDGRHPMVEHALKREMFVPNDTELNHTDQEM 609
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS Y+RQVA++ IMAQ GSF+PA SA +D I+TR+GA+D I G+ST
Sbjct: 610 IIITGPNMAGKSTYMRQVAVLTIMAQTGSFIPAKSASFAPVDRIFTRVGAADDISTGQST 669
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ E S+IL N T SL+++DE+GRGTST+DG++IA A ++YL LF THY
Sbjct: 670 FMVEMKEVSHILCNATKNSLILLDEIGRGTSTYDGMSIARAVVEYLNSKVHAYTLFATHY 729
Query: 915 PKIADIKTKFTGSVGTYHV-SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
+++D+ + H+ +Y + K G +++T+L ++VPG ++ S+G VA
Sbjct: 730 HELSDMAAE------NEHIKNYTVTVKERG-------KEITFLRRIVPGSADKSYGIHVA 776
Query: 974 QLAQLPPSCISRATVIAAKLEAE 996
+LA LP S + RA I LE E
Sbjct: 777 RLAGLPESLLKRADEILEGLEVE 799
>gi|151942085|gb|EDN60441.1| MutS-like protein [Saccharomyces cerevisiae YJM789]
Length = 1242
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 266/1030 (25%), Positives = 443/1030 (43%), Gaps = 151/1030 (14%)
Query: 7 QVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKKP 66
Q SR + P Q +A+S +S + + V A+R+ PK+ P
Sbjct: 247 QAPSRSYTPSHRQPSATSKSSKFNKQNE---ERYQWLVDERDAQRR-------PKS--DP 294
Query: 67 KLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMA 126
+ P TL IP+ + K+TP E+Q E+K+K D ++ + G F + +DA +A
Sbjct: 295 EYDPRTLY-IPSSAWN-----KFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDALLA 348
Query: 127 AKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
+ L I N A IP + + G+KV V Q E+ K G G
Sbjct: 349 NALFDLKIAGGGRANMQLAGIPEMSFEYWAAQFIQMGYKVAKVDQRESMLAKEMREGSKG 408
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN------------VGKI 232
R L + T TL G+ + + + + ++ GN V K+
Sbjct: 409 IVKRELQCILTSGTL------TDGDMLHSDLATFCLAIREEPGNFYNETQLDSSTIVQKL 462
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSK 291
+FG F ++ +TG++ EF D + L+ ++ + P E+++ + LS
Sbjct: 463 NTKIFGAAF--------IDTATGELQMLEFEDDSECTKLDTLMSQVRPMEVVMERNNLST 514
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSL-YENMGED---TLSNNEDQNMD 347
K++ + P + A + + AE++S Y + ED L + D
Sbjct: 515 LANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEIISSEYFSTEEDWPEVLKSYYDTGKK 574
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALAL-TIRHLKQFGLERIMCLGASFRSLSGSMEMTLS 406
V SA G++ L +++++K++ + M L
Sbjct: 575 V-----GFSAFGGLLYYLKWLKLDKNLISMKNIKEYDF------------VKSQHSMVLD 617
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TLQ LE+ N+ +GS+ GTL + N +T G R++++W+ HPL +N I +RLD+V
Sbjct: 618 GITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGKRMMKKWLMHPLLRKNDIESRLDSVD 677
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
+ + D+T+ E + + + PD++R + RI RT
Sbjct: 678 SLLQ-------------------DITLRE--------QLEITFSKLPDLERMLARIHSRT 710
Query: 527 ATPSEF---IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIG 583
+F I + I+ L+ + G+ + + +S P +
Sbjct: 711 IKVKDFEKVITAFETIIELQDSLKNNDLKGDVSKYI----------------SSFPEGLV 754
Query: 584 KAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+A K S N + N+++ G E ++ +Q ++EL ++ RKQ
Sbjct: 755 EAVK--SWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELMEILMTYRKQFKC 812
Query: 644 RNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
N+++ + IE+P A VP NW ++ + K RY+S EV +A A E
Sbjct: 813 SNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEVRALARSMAEAKEIH 872
Query: 702 TIVCRAAWDSFLKEFGGYYAE-FQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHE 758
+ + ++F +Y + +QA++ +DCL A+ S RP VD+ +
Sbjct: 873 KTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYLGAPSCRPTIVDEVD 932
Query: 759 PVQ-------IHICSGRHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
+ S RHP L +F+PND L E+ ++TG N GKS +
Sbjct: 933 SKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKEQPRLGLLTGANAAGKSTIL 992
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
R + IMAQ+G +VP SA L +D I TR+GA+D+I QG+STF EL E IL
Sbjct: 993 RMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKSTFFVELAETKKILDMA 1052
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG 929
T +SL++VDELGRG S+ DG AIA + L ++ H + + F THY +A
Sbjct: 1053 TNRSLLVVDELGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLA----------- 1101
Query: 930 TYHVSYLTSHKVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCIS 984
S H + P+ ++ ++VT+LYK++ G SE SFG VA + + I
Sbjct: 1102 ----SSFKHHPQVRPLKMSILVDEATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIID 1157
Query: 985 RATVIAAKLE 994
A + A LE
Sbjct: 1158 NAQIAADNLE 1167
>gi|402820022|ref|ZP_10869589.1| hypothetical protein IMCC14465_08230 [alpha proteobacterium
IMCC14465]
gi|402510765|gb|EJW21027.1| hypothetical protein IMCC14465_08230 [alpha proteobacterium
IMCC14465]
Length = 934
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 266/955 (27%), Positives = 435/955 (45%), Gaps = 131/955 (13%)
Query: 74 NPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY 133
N T S ++ TP+ +Q +++K + D LL +G + F +DA AA L I
Sbjct: 7 NTSTTKSKMPPPDQNITPMMRQFLDIKANHQDFLLFYRMGDFYELFFDDAITAAAALDIT 66
Query: 134 -----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
HLD N +P ++ RL+ G KV + +QTE A +A G R
Sbjct: 67 LTHRGKHLDENIPMCGVPFHAAENYLHRLIRQGHKVAICEQTEDPA-EAKKRGSKSVVRR 125
Query: 189 GLSALYTKATLEAAEDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGF-DVRL 245
+ L T TL EDG G +NYL G+ R G + + L
Sbjct: 126 EVVRLVTAGTLT--------EDGLLEAGANNYLAAF-------GQTRQGARQEARQEENL 170
Query: 246 GVVAVEISTGDV--VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGP 303
+ V+ISTGDV G F ++ L L P ELLL LS++ + +L G
Sbjct: 171 ALAWVDISTGDVQIFAGTFE------AIQGRLAGLMPRELLLPDSLSREKQGLLSESCGE 224
Query: 304 ASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
+ + G AL + + +EG +
Sbjct: 225 VVVTELTSSQASSESGYAALVNAYQV--------------------------ATLEGFGD 258
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
A I +L L ++ L R S M + A T Q LE+L+N + G
Sbjct: 259 WSRSMYAACGSLINYLTLTQLGKLPNLKPP-RLTSADERMRIDAATCQNLEILQNKT-GE 316
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS----EIAESMGSYRTSE 479
+ G+L ++ T+T G+R+L + + PL + I ARLDA+S AE+M + T
Sbjct: 317 KKGSLFAAIDKTVTGPGARMLSQRLAAPLAQKEAIEARLDAISFYAGHDAETMRTCETKR 376
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI 539
++ L ++PD+ R + R+ P + A+
Sbjct: 377 AI---------------------------LKQAPDMARALGRMSLERCGPRDLAAIRDG- 408
Query: 540 LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAV-IGKAAK-LLSTVNKEAA 597
L G L + + + L A L+ L +S+P GK K L + ++K +
Sbjct: 409 LARGFDLAATALP----DIMPCPPLIEAALEALAALSSAPKDGEGKPLKDLCAHLDKALS 464
Query: 598 DQGDLL--NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT 655
D+ LL + I+ G + AR+ ++ + L N R+ G++ L+ + +
Sbjct: 465 DELPLLTRDGGFIAAGYHPGLDEARRLRDESRRVIAGLQNSYREDTGIKALKVKHNAVLG 524
Query: 656 HLIELPANFKVPLNWAKVNST-------KKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+ I++PA L A T ++R+ + E+ Q++ A E+ T + +
Sbjct: 525 YHIDVPAAHGDRLMTAPFAETFFHRQTLANSVRFSTTELAELAGQISRAGEKATGLEQEI 584
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGR 768
+DS E + +ALA LD ALA L+ + N+VRP DDH + + +GR
Sbjct: 585 FDSLCGEVLAEAEAISRSAEALAELDVALALAKLACDMNWVRPEIYDDH---RFFVEAGR 641
Query: 769 HPVLDTILLDN----FVPNDTNLHAEREYCQ-----IITGPNMGGKSCYIRQVALIGIMA 819
HPV++ L F+ ND ++HA+ + ++TGPNM GKS Y+RQ ALI ++A
Sbjct: 642 HPVVEASLFGQGDSPFIANDCHIHADDKQGDTGRLLLLTGPNMAGKSTYLRQNALIAVLA 701
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q G +VPA+ AE+ ++D +++R+GA+D + +G+STF+ E+ E + IL S+VI+DE
Sbjct: 702 QSGCYVPAAKAEIGIVDRLFSRVGAADDLARGQSTFMVEMVETAAILNQAGPASMVILDE 761
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
+GRGTST DG++IA+AT++++ E KC +F THY ++ + K V+ +T
Sbjct: 762 IGRGTSTFDGLSIAWATVEHMHEINKCRTMFATHYHELTGLSEKLD------KVTNITMR 815
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ DV +L++V+ G ++ S+G VA+LA LP I RA ++ +LE
Sbjct: 816 V------AEYQGDVAFLHEVIAGAADRSYGIHVAKLAGLPTPVIERARILLEQLE 864
>gi|434380887|ref|YP_006702670.1| DNA mismatch repair protein MutS [Brachyspira pilosicoli WesB]
gi|404429536|emb|CCG55582.1| DNA mismatch repair protein MutS [Brachyspira pilosicoli WesB]
Length = 896
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 251/948 (26%), Positives = 455/948 (47%), Gaps = 134/948 (14%)
Query: 71 HTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL 130
T + S + +K TP+ +Q E+K KY D +L+ +G + F EDA++ +++L
Sbjct: 3 ETFFSLEESSENSPKEEKLTPMMRQYKEIKDKYSDSILLFRMGDFYEVFFEDAKIVSELL 62
Query: 131 GIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRG 189
G+ N A +P ++ ++ +LV +G K+ + Q E P A G R
Sbjct: 63 GLTLTKRANVPMAGVPYHAIDNYLSKLVKSGKKIAICDQME-------DPKTAKGIVKRD 115
Query: 190 LSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
++ + T T+ + + + NYL ++ V K N V +
Sbjct: 116 VTQVITPGTIAENKYLESKSN------NYLASII-----VSKSENNV---------AIAI 155
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAV---LLSLSPAELLLGQPLSKQTEKMLLAYAGPASN 306
+ISTG++ EF + + L+ + ++ SP E++ + S + K++ SN
Sbjct: 156 CDISTGELYVTEFENNNTKDFLDEICEEIIRFSPKEIMTVE--SVKESKIIKEIQNRFSN 213
Query: 307 VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
+ A + + ++ + + ED+++ V G
Sbjct: 214 IFFSTTPNYTAEYSYAYKLLTNHFKTISLKSFGI-EDKHLIVSLLG-------------- 258
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
+L ++ L + LE I + R S MTL T+ LE+L N +
Sbjct: 259 ----SLIYYLQELSKTSLEHISNIKLYNRKDS----MTLDYATISSLEILETIRNDNNKM 310
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
TL ++ T T G+R L+R + PL D + I+ RL+ V ++
Sbjct: 311 TLFDTIDKTKTSMGARYLKRIIVEPLLDIDEINKRLNNV-----------------EYFY 353
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
KN +F Y + +L+ +G DI+R +++ P E +++ + + + + +
Sbjct: 354 KNQ-------KFMYRIMDMLSDVG---DIERLASKLALGRINPKELVSLKRFLFSSLEII 403
Query: 547 QQL---HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+L + D E++ + + L++R IL P ++ ++GD
Sbjct: 404 TELVLNNFDDVNFEEINDIKIITDLIERAIL--EDPKIV--------------INEGD-- 445
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PA 662
II + ++ + +A + + + L N + + NL+ + I + IE+ +
Sbjct: 446 ---IIKDDYDEKLKKYNEARREGRSWISELENEYKSITTINNLKIRYNNVIGYYIEITKS 502
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGG 718
N VP ++ K + + RY + +++ + ANE+ + +D F++ +
Sbjct: 503 NIPLVPKDFIKRQTLVGSERYTTSKLMEYEKTINEANEKSYAL---EYDIFIEVRNKVNK 559
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL- 777
Y + ++ +D +LA L+ +N+ +P+ + I I GRHPV++ L
Sbjct: 560 YLTSILKMAKIISVIDVYVSLACLASEENYTKPII---TDDGIIDIKEGRHPVVEANLKN 616
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
++F+ NDT L + E+ IITGPNM GKS Y+RQ ALI ++AQ+GSFVPA SA++ ++D
Sbjct: 617 ESFIANDTYLDNKNEHLLIITGPNMSGKSTYLRQTALIVLLAQIGSFVPAKSAKISIVDR 676
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GASD+I +G STFL E+NE +YIL +CT +SLVI+DE+GRGTST+DG++IA+A +
Sbjct: 677 IFTRVGASDNIAKGESTFLVEMNETAYILNHCTDKSLVIMDEIGRGTSTYDGLSIAWAIV 736
Query: 898 DYLL--EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
+YL+ E+KK LF THY ++ ++ + + ++KV+ ++ D+ + +
Sbjct: 737 EYLVNEENKKSKTLFATHYHELTMLE----------DLEGVKNYKVL--VEEYKDE-IIF 783
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+ KV+ G +ESS+G A++A P I RA+ I KLE E +V+N
Sbjct: 784 MKKVIEGAAESSYGIYAAKIAGAPNKVIQRASEILKKLENEAGIQVEN 831
>gi|384209630|ref|YP_005595350.1| DNA mismatch repair protein MutS [Brachyspira intermedia PWS/A]
gi|343387280|gb|AEM22770.1| DNA mismatch repair protein MutS [Brachyspira intermedia PWS/A]
Length = 887
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 256/942 (27%), Positives = 456/942 (48%), Gaps = 136/942 (14%)
Query: 81 SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNF 140
S+ N+K TP+ +Q E+K KY D +L+ +G + F +DA++ + +LG+ N
Sbjct: 8 SEKEENQKLTPMMRQYKEIKDKYSDSILLFRMGDFYEVFFDDAKVVSDILGLTLTKRANV 67
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLE 200
A +P ++ ++ RLV +G K+ + Q E + G R ++ + T T+
Sbjct: 68 PMAGVPYHAIDNYLSRLVKSGMKIAICDQMEDPKLAK------GIVKREVTQVITPGTIS 121
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ + + NYL V+ V K + +ISTG++
Sbjct: 122 ENKYLESKSN------NYLASVI-----VSKSEKNA---------ALSICDISTGELYAT 161
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E N L + EA L + +++ TE+++ P + +E S I
Sbjct: 162 EINSN-LENHNEA-----------LKEIINELTEEII--RFSPKEIMTIESVSESIII-- 205
Query: 321 GALAEVMSLYENMGEDTLSN-NEDQNMDVPEQGNHRSAIE----GIMNMPDLAVQALALT 375
E+ + + N+ T N + + NH + GI P L + L T
Sbjct: 206 ---KEIQNKFNNVFYSTTPNYTAEHSYAYKTLTNHFKTVSLKSFGIEEKP-LLISLLGST 261
Query: 376 IRHLKQFG---LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
I ++++ LE I + R S MTL T+ LE+L N + TL +
Sbjct: 262 IFYIQELSKTSLEHISNIKLYNRRDS----MTLDYATIASLEILETIRNDNNKMTLFDTI 317
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+ T T G+R L+R + PL + I+ RL+ V ++
Sbjct: 318 DRTKTSMGARYLKRIIVEPLLNIEEINKRLNNVEFFYKNQ-------------------- 357
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--- 549
+F Y + +L +G DI+R +++ P E +++ + ++ + + + +L
Sbjct: 358 ----KFMYKIRDLLQDIG---DIERLASKLALGRINPKELVSLKRFLVGSLEVVTELAMN 410
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
+ + E+V + + L++R IL P V+ ++GD II
Sbjct: 411 NFEDVNFEEVNDIKIITDLIERAIL--EDPKVV--------------INEGD-----IIK 449
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VP 667
+ + + +A + + + L + ++ G+ NL+ + I + +E+ AN VP
Sbjct: 450 DDYDETLKKYNEARREGRSWIAELEHNYKQDTGINNLKIRYNNVIGYYVEVTKANVSSVP 509
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGGYYAEFQ 724
++ K + + RY + +++ + ANE+ + +D F++ + Y
Sbjct: 510 SDFIKRQTLIGSERYTTSKLMEYETIINEANEKSYAL---EYDIFIEVRNKTNEYLNSIL 566
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPN 783
+ ++ +D +LA L++ N+++P+ + I I GRHPV++ L ++F+PN
Sbjct: 567 KMARVISIIDVYSSLACLAKEDNYIKPI---ITDDGIIDIKDGRHPVVEVNLKTESFIPN 623
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT L + E+ IITGPNM GKS Y+RQ ALI ++AQ+GSFVPASSA++ ++D I+TR+G
Sbjct: 624 DTYLDNKNEHMLIITGPNMSGKSTYLRQTALIVLLAQIGSFVPASSAKISIVDRIFTRVG 683
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL-- 901
ASD+I +G STFL E+NE +YIL +CT +SLVI+DE+GRGTST+DG++IA+A ++YL+
Sbjct: 684 ASDNIARGESTFLVEMNETAYILNHCTDKSLVIMDEIGRGTSTYDGLSIAWAIVEYLVHE 743
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
E+KK LF THY ++ ++ + + ++KV+ ++ D+ + ++ KV
Sbjct: 744 ENKKAKTLFATHYHELTMLE----------DLEGVKNYKVL--VEEYKDE-IIFMKKVTE 790
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
G ++SS+G A++A P I RAT I +LEA+ S +V+N
Sbjct: 791 GAAKSSYGIYAAKIAGAPNKVIKRATEILKRLEADASVQVEN 832
>gi|333029553|ref|ZP_08457614.1| DNA mismatch repair protein mutS [Bacteroides coprosuis DSM 18011]
gi|332740150|gb|EGJ70632.1| DNA mismatch repair protein mutS [Bacteroides coprosuis DSM 18011]
Length = 876
Score = 286 bits (732), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 265/1020 (25%), Positives = 463/1020 (45%), Gaps = 185/1020 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI----YAHLDHNFM-TAS 144
TP+ +Q +LK K+P+ +++ G + F DA +AA +LGI A+ + ++ A
Sbjct: 9 TPMMKQFFDLKKKHPNAVMLFRCGDFYETFSSDAVLAADILGITLTRRANGKNTYVEMAG 68
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAE 203
P L+ ++ +LV AG +V + Q E P RG++ L T + +
Sbjct: 69 FPHHALDTYLPKLVRAGKRVAICDQLE-------DPKTTKTLVKRGVTELVTPG-VSIND 120
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
++ + E+N+L + ++G F ++ISTG+ + E N
Sbjct: 121 NILNNK-----ENNFLAAIY--------FNRSIYGISF--------LDISTGEFLTAEGN 159
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKM----LLAYAGPASNVRVECASRDCFIG 319
++ + +L + +P E+L + Q E++ Y V E + + +
Sbjct: 160 SDYI----DKLLTNFAPKEVLFERGKKTQFEELFGNKFFTYE-LDDWVFTEQTAHEKLLS 214
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
+A ++ G D L N G++ + +Q L +T H
Sbjct: 215 HFQVAN----FKGFGVDHLPN-------------------GLIAAGSI-LQYLDITQHH- 249
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ I L + + L T++ LE+L + ++G +LL +++ T+T
Sbjct: 250 ---NISHITTLS----RIEEDKFVRLDKFTIRSLELLNSMNDGG--SSLLQVIDKTITPM 300
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G RLL+RWV PL + N I+ RLD V D +P F
Sbjct: 301 GGRLLKRWVVFPLKEVNAINNRLDVV------------------------DYFFKQPSFK 336
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQL---------- 546
I++ L +G D++R I+++ +P E + + +QAI K
Sbjct: 337 EIITDQLHLIG---DLERIISKVAVGRVSPREVVQLKVALQAIEPIKKACLNANDASLNR 393
Query: 547 --QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
QL++ + R+++ + + P ++ K + S VN+E D
Sbjct: 394 IGDQLNLCEKIRDRIDKE-----------IENDPPMLVNKGHVICSGVNEELDD------ 436
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
RK S K+ L + ++ G+ +L+ + + IE+
Sbjct: 437 --------------LRKIAYSGKDYLLQIQQREIEETGIPSLKIAYNNVFGYYIEVRNTH 482
Query: 665 K--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
K VP W + + RY + E+ +++ A E++ I+ ++ + + Y +
Sbjct: 483 KDKVPKEWIRKQTLVSAERYITQELKVYEEKILGAEEKILILEAKLFEELVTDLAEYISA 542
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNF 780
Q +AALDCL + +++++ ++RPV DD + I GRHPV++ L + +
Sbjct: 543 IQLNANQIAALDCLLSFSSIAQLNKYIRPVIQDDD---VLSIQQGRHPVIEKELPLGEQY 599
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
+ ND L + +ITGPNM GKS +RQ ALI +MAQ+G FVPA SA++ ++D I+T
Sbjct: 600 IANDVYLDNTTQQIIMITGPNMSGKSALLRQTALITLMAQIGCFVPAESAQIGLVDKIFT 659
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+GASD+I G STF+ E+NEA+ IL N +++SLV+ DELGRGTST+DG++IA+A ++Y+
Sbjct: 660 RVGASDNISMGESTFMVEMNEAANILNNLSSRSLVLFDELGRGTSTYDGISIAWAIVEYI 719
Query: 901 LE--HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
+ + LF THY ++ +++ F + Y+VS + D V +L K
Sbjct: 720 HNNPNNRAKTLFATHYHELNEMEKSF-DRIKNYNVSV-----------KEIDNKVIFLRK 767
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQE 1018
+ G SE SFG VA++A +PPS + R+ I A+LEA +R S + L Q+
Sbjct: 768 LKRGGSEHSFGIHVAKMAGMPPSIVKRSNEILAQLEA--VNRSGEESNNKKSKTPLISQK 825
Query: 1019 QEAQENMPVSPESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAK 1078
QE + L + + ++S RD +NL ++ P ++ L + I K
Sbjct: 826 QE---------DGVQLSFFQLDDPILSQIRDEIINLD--VNNLTPLEALNKLNDIKKIIK 874
>gi|440906162|gb|ELR56463.1| DNA mismatch repair protein Msh6 [Bos grunniens mutus]
Length = 1361
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 258/986 (26%), Positives = 435/986 (44%), Gaps = 138/986 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP ++ ++K++ D+++ +VG + + DA + LG+ + N+ + P
Sbjct: 407 TPGMRKWWQIKSQNFDLVIFYKVGKFYEMYHMDALIGVSELGL-VFMKGNWAHSGFPEIA 465
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIK-------AHGPGKAGPFGRGLSALYTKATLEAA 202
+ LV G+KV V+QTET + AH R + + TK T +
Sbjct: 466 FGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS 525
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
G D S YL+ + + + G GV V+ S G G+F
Sbjct: 526 VLEG---DPSENYSKYLLSLKEKEEE---------SSGHTRVYGVCFVDTSLGRFFIGQF 573
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+D S ++ P ++L + KM+L + + + ++ I G
Sbjct: 574 SDDRHCSRFRTLVAHYPPVQVLFEKGNLSMDTKMILKSSLSS-------SLQEGLIPGSQ 626
Query: 323 LAEVMSLYENMGED---TLSNNEDQNMDVPEQGNHRSAIEGIMNMPD-----------LA 368
+ + E+ T NED + +P+ ++G+ + D LA
Sbjct: 627 FWDAAKTLRTLLEEGYFTDKLNEDGGVMLPQ------VLKGMTSESDSIGLTPGEKSELA 680
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSL------------------SGSMEMTLSANTL 410
+ AL + +LK+ +++ + A+F + M L A TL
Sbjct: 681 LSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHATRPGAVFAKANQRMVLDAVTL 740
Query: 411 QQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE 470
LE+ N +NGS GTLL ++ T +G RLL++W+ PLC+ + I+ RLDA+
Sbjct: 741 NNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPHAINDRLDAIE---- 796
Query: 471 SMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP- 529
D+ +V + +S V+ L + PD++R +++I H +P
Sbjct: 797 -------------------DLMVVPDK----ISEVVDLLKKLPDLERLLSKI-HNVGSPL 832
Query: 530 -----SEFIAVM-QAILYAGKQLQQL-----------HIDGEYREKVTSKTLHSALLKRL 572
+ A+M + Y+ K++ I G E + S +LK+
Sbjct: 833 KSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDD--FKSKILKQ- 889
Query: 573 ILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVARARKAVQSAKE 628
+LT + + G+ L S +N+ ++ L+ G S+ +A ++ ++
Sbjct: 890 VLTLQTKSPEGRFPDLTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQ 949
Query: 629 ELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYHSP 685
L + R ++G R + + + + +E+P NF +P + ++ K RY +
Sbjct: 950 SLLEYLEKQRSRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTK 1009
Query: 686 EVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN 745
+ L L A E + F Y ++QAAV+ +A LD L L SR
Sbjct: 1010 TIEKKLGNLINAEERRDASLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLTNYSRG 1069
Query: 746 KN--FVRPVFV--DDHEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAE-------REY 793
+ RP+ + ++ P + + RHP + T D+F+PND + E + Y
Sbjct: 1070 GDGPMCRPIILLPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAY 1129
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
C ++TGPNMGGKS +RQ L+ IMAQ+G +VPA L +D ++TR+GASD I G S
Sbjct: 1130 CVLVTGPNMGGKSTLMRQAGLLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGES 1189
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF EL+E + IL + TA SLV+VDELGRGT+T DG AIA A + L E+ KC LF TH
Sbjct: 1190 TFFVELSETASILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTH 1249
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y + + ++ +V H++ + ++ P S + +T+LYK + G S+GF A
Sbjct: 1250 YHSLVEDYSQNV-AVRLGHMACMVENECEDP----SQETITFLYKFINGACPKSYGFNAA 1304
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSS 999
+LA LP I + A + E S
Sbjct: 1305 RLANLPEEVIQKGHRKAREFEKMTQS 1330
>gi|392960659|ref|ZP_10326125.1| DNA mismatch repair protein mutS [Pelosinus fermentans DSM 17108]
gi|421054583|ref|ZP_15517550.1| DNA mismatch repair protein MutS [Pelosinus fermentans B4]
gi|421057355|ref|ZP_15520199.1| DNA mismatch repair protein mutS [Pelosinus fermentans B3]
gi|421065506|ref|ZP_15527247.1| DNA mismatch repair protein mutS [Pelosinus fermentans A12]
gi|421071446|ref|ZP_15532564.1| DNA mismatch repair protein mutS [Pelosinus fermentans A11]
gi|392440685|gb|EIW18354.1| DNA mismatch repair protein MutS [Pelosinus fermentans B4]
gi|392447073|gb|EIW24336.1| DNA mismatch repair protein mutS [Pelosinus fermentans A11]
gi|392454795|gb|EIW31614.1| DNA mismatch repair protein mutS [Pelosinus fermentans DSM 17108]
gi|392458760|gb|EIW35254.1| DNA mismatch repair protein mutS [Pelosinus fermentans A12]
gi|392463263|gb|EIW39233.1| DNA mismatch repair protein mutS [Pelosinus fermentans B3]
Length = 864
Score = 286 bits (731), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 246/921 (26%), Positives = 428/921 (46%), Gaps = 139/921 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLD---HNFMTAS 144
KYTP+ +Q +E+K+++ + +L +G + F DAE+A++ L I
Sbjct: 4 KYTPMMEQYLEIKSQHENEILFFRMGDFYEMFFTDAELASRELEITLTARDGGQRVPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
IP + ++ +L++ G+KV + +Q E P +A G R + + T T+ AE
Sbjct: 64 IPYHAADTYIAKLISKGYKVAICEQVE-------DPKQAKGIVKREVIKIITPGTI-IAE 115
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
++ + D++ N + + L + A +ISTG+ ++ F
Sbjct: 116 NL----------------LPDNNNNYLAVLYEE-----EEELILAAADISTGECLWATFL 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ L L L P EL+L + + EK+ SN C I L
Sbjct: 155 GSQRLTALYDQLFRLMPTELVLASKI-ENIEKL----NTFISNRIPHCTHTTLTIDNLML 209
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF- 382
+ M +D +P+Q D+A+ A+ + +L Q
Sbjct: 210 VSDLPKQHFMTDD-----------LPQQ--------------DVALAAIGCLLYYLHQTV 244
Query: 383 -----GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+ R++ A F L T+ + +++ LEV RN +G + TLL+++++T T
Sbjct: 245 KTDLSHINRLINYNA-FEYL------TIDSTSMRNLEVTRNVRDGGKKDTLLYVLDYTKT 297
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G RLL++W+ +PL + I R D+++E+ E +P
Sbjct: 298 AMGGRLLKKWLEYPLMNTTHIIQRQDSIAELLE------------------------KPT 333
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+ L ++ D++R +TRI TA+ + IA+ +++ +QL +
Sbjct: 334 LRQTIHETLANIY---DLERILTRIEVGTASARDLIALKSSLMVLPTIKEQL----QKTN 386
Query: 558 KVTSKTLHSALLKRL-ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
V LH L + ++T A++ + +G L I G E+
Sbjct: 387 TVFLSNLHFYLHTHVDLVTLVDTAIVDNPPF--------SVREGGL-----IKRGYDLEL 433
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVN 674
+ +K+ + + R+ G+++L+ + IE+ + VPL++ +
Sbjct: 434 DELHTIARDSKQFVQDIETRERENTGIKSLKVGYNKVFGYYIEVTHSHTASVPLSYVRKQ 493
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY +PE+ ++ A E++ + + Y E Q + LA LD
Sbjct: 494 TLANAERYITPELKEFESKILGAQEKIVTIEYHLFSKIRDHIKVYIKEIQETARQLAQLD 553
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREY 793
+ +L+ ++ N++RP E I I GRHP+++ +L + FVPND+ L+
Sbjct: 554 AIISLSEVAFRHNYIRPTITQTRE---ITIKDGRHPIVERLLKRELFVPNDSELNHHSNE 610
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS Y+RQVAL+ +MAQ+GSF+PA A + +D I+TR+GASD + G+S
Sbjct: 611 IMIITGPNMAGKSTYMRQVALLVLMAQIGSFIPAREAIISPVDRIFTRVGASDDLSTGQS 670
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+NE + IL++ T+QSL+I+DE+GRGTST DG++IA A ++Y+ E K LF TH
Sbjct: 671 TFMVEMNEVAQILKHATSQSLIILDEIGRGTSTFDGMSIARAVIEYIKERVKAKTLFATH 730
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ ++ + +V Y V+ + DV +L +++PG ++ S+G VA
Sbjct: 731 YHELTEL-ADYHKTVKNYSVAV-----------KERGSDVVFLRRIIPGGADKSYGIHVA 778
Query: 974 QLAQLPPSCISRATVIAAKLE 994
QLA LP I RA + +LE
Sbjct: 779 QLAGLPQKVIKRAQELLVELE 799
>gi|256269843|gb|EEU05102.1| Msh6p [Saccharomyces cerevisiae JAY291]
Length = 1242
Score = 286 bits (731), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 266/1030 (25%), Positives = 444/1030 (43%), Gaps = 151/1030 (14%)
Query: 7 QVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKKP 66
Q SR + P +Q +A+S +S + + V A+R+ PK+ P
Sbjct: 247 QAPSRSYNPSHSQPSATSKSSKFNKQNE---ERYQWLVDERDAQRR-------PKS--DP 294
Query: 67 KLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMA 126
+ P TL IP+ + K+TP E+Q E+K+K D ++ + G F + +DA +A
Sbjct: 295 EYDPRTLY-IPSSAWN-----KFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDALLA 348
Query: 127 AKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
+ L I N A IP + + G+KV V Q E+ K G G
Sbjct: 349 NALFDLKIAGGGRANMQLAGIPEMSFEYWAAQFIQMGYKVAKVDQRESMLAKEMREGSKG 408
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN------------VGKI 232
R L + T TL G+ + + + + ++ GN V K+
Sbjct: 409 IVKRELQCILTSGTL------TDGDMLHSDLATFCLAIREEPGNFYNETQLDSSTIVQKL 462
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSK 291
+FG F ++ +TG++ EF D + L+ ++ + P E+++ + LS
Sbjct: 463 NTKIFGAAF--------IDTATGELQMLEFEDDSECTKLDTLMSQVRPMEVVMERNNLST 514
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSL-YENMGED---TLSNNEDQNMD 347
K++ + P + A + + AE++S Y + ED L + D
Sbjct: 515 LANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEIISSEYFSTEEDWPEVLKSYYDTGKK 574
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALAL-TIRHLKQFGLERIMCLGASFRSLSGSMEMTLS 406
V SA G++ L +++++K++ + M L
Sbjct: 575 V-----GFSAFGGLLYYLKWLKLDKNLISMKNIKEYDF------------VKSQHSMVLD 617
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TLQ LE+ N+ +GS+ GTL + N +T G R++++W+ HPL +N I +RLD+V
Sbjct: 618 GITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGKRMMKKWLMHPLLRKNDIESRLDSVD 677
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
+ + D+T+ E + + + PD++R + RI RT
Sbjct: 678 SLLQ-------------------DITLRE--------QLEITFSKLPDLERMLARIHSRT 710
Query: 527 ATPSEF---IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIG 583
+F I + I+ L+ + G+ + + +S P +
Sbjct: 711 IKVKDFEKVITAFETIIELQDSLKNNDLKGDVSKYI----------------SSFPEGLV 754
Query: 584 KAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+A K S N + N+++ G E ++ +Q ++EL ++ RKQ
Sbjct: 755 EAVK--SWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELMEILMTYRKQFKC 812
Query: 644 RNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
N+++ + IE+P A VP NW ++ + K RY+S EV +A A E
Sbjct: 813 SNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEVRALARSMAEAKEIH 872
Query: 702 TIVCRAAWDSFLKEFGGYYAE-FQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHE 758
+ + ++F +Y + +QA++ +DCL A+ S RP VD+ +
Sbjct: 873 KTLEEDLKNRLCQKFDAHYNTIWIPTIQAISNIDCLLAITRTSEYLGAPSCRPTIVDEVD 932
Query: 759 PVQ-------IHICSGRHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
+ S RHP L +F+PND L E+ ++TG N GKS +
Sbjct: 933 SKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKEQPRLGLLTGANAAGKSTIL 992
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
R + IMAQ+G +VP SA L +D I TR+GA+D+I QG+STF EL E IL
Sbjct: 993 RMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKSTFFVELAETKKILDMA 1052
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG 929
T +SL++VDELGRG S+ DG AIA + L ++ H + + F THY +A
Sbjct: 1053 TNRSLLVVDELGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLA----------- 1101
Query: 930 TYHVSYLTSHKVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCIS 984
S H + P+ ++ ++VT+LYK++ G SE SFG VA + + I
Sbjct: 1102 ----SSFKHHPQVRPLKMSILVDEATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIID 1157
Query: 985 RATVIAAKLE 994
A + A LE
Sbjct: 1158 NAQIAADNLE 1167
>gi|445116827|ref|ZP_21378658.1| DNA mismatch repair protein mutS [Prevotella nigrescens F0103]
gi|444839996|gb|ELX67040.1| DNA mismatch repair protein mutS [Prevotella nigrescens F0103]
Length = 932
Score = 285 bits (730), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 257/952 (26%), Positives = 429/952 (45%), Gaps = 167/952 (17%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S+ NK TP+ +Q +K K+PD L++ G + + +DA A+K+LGI +N
Sbjct: 43 SNMAKDNKGLTPMMRQFFSMKEKHPDALMLFRCGDFYETYCDDAIEASKILGITLTRRNN 102
Query: 140 FMTAS-----IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFG 187
A P L+ + +L+ AG +V + Q E K GK G
Sbjct: 103 GAAAGDEMAGFPHHALDTFLPKLIRAGKRVAICDQLEDPKKKREALKGKRGLSAEDKMVR 162
Query: 188 RGLSALYTKATLEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLG 246
RG++ L T V G++ E+N+L V FG G G
Sbjct: 163 RGITELVTPG-------VAMGDNVLNYKENNFLAAVH-------------FGKG---SCG 199
Query: 247 VVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN 306
V ++ISTG+ + GE ++ E ++ + SP E+L + E+
Sbjct: 200 VSFLDISTGEFLTGEGTFDYV----EKLIGNFSPKEVLYDRARKSDFERHF--------G 247
Query: 307 VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
R+ + ++ L+ L ++ G L + V N A IM +
Sbjct: 248 TRLCVYEMEDWVFTD-LSARQKLLKHFGTKNL-----KGFGVDHLNNGVIAAGAIMQYLE 301
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEY 425
L I H+ S + + L T++ LE++ +GS
Sbjct: 302 LTQHT---NINHI------------TSLARIEEEKYVRLDRFTIRSLELVAPMQEDGS-- 344
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
+LL++++ T+T G R+L RW+ PL D I+ RLD V
Sbjct: 345 -SLLNVVDRTITPMGGRMLHRWLVFPLKDVKPINERLDIV-------------------- 383
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI------ 539
+ EP F L L +G D++R I+++ +P E + + A+
Sbjct: 384 ----EYYFREPDFRQCLDDQLHRMG---DLERIISKVAAGRVSPREVVQLKIALRAIQPM 436
Query: 540 ----LYAGKQL-----QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLS 590
LYA + +QL++ R+++ + + P ++ K
Sbjct: 437 KTACLYANNEALKRVGEQLNLCESVRDRIEQE-----------IKPDPPQLVAKGN---- 481
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
+I++G +E+ R + K+ L + Q G+ +L+
Sbjct: 482 ----------------VIAHGFNAELDELRSIRDNGKQVLLDIQEKEAAQTGISSLKIGF 525
Query: 651 VSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+ + +E+ FK VP +W + + + RY +PE+ ++ A+E++ +
Sbjct: 526 NNVFGYYLEVRNTFKDKVPADWIRKQTLAQAERYITPELKEYEAKILGADEKILALEARL 585
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGR 768
++ +++ + + Q +A LDCL A A ++ +VRPV VDD + I I GR
Sbjct: 586 FNELVQDMQEFIPQIQINANLVARLDCLLAFANIAEENKYVRPV-VDDS--MVIDIKKGR 642
Query: 769 HPVLDTILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
HPV++T L + ++PND L E++ +ITGPNM GKS +RQ ALI ++AQ+GSFVP
Sbjct: 643 HPVIETQLPLGEPYIPNDVYLDNEQQQIMMITGPNMAGKSALLRQTALIVLLAQIGSFVP 702
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
A A + ++D ++TR+GASD+I G STF+ E+ EAS IL N T +SLV+ DELGRGTST
Sbjct: 703 AEGARIGLVDKVFTRVGASDNISLGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTST 762
Query: 887 HDGVAIAYATLDYLLEHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
+DG++IA+A ++YL E + LF THY ++ ++ F + ++VS
Sbjct: 763 YDGISIAWAIVEYLHEQPRAAARTLFATHYHELNEMAKNFR-RIKNFNVSV--------- 812
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ D + ++ K+ G SE SFG VA +A +P S + RA V+ +LEA+
Sbjct: 813 --KEVDGKIIFVRKLERGGSEHSFGIHVADIAGMPKSIVKRANVVLKELEAD 862
>gi|331089571|ref|ZP_08338470.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438886|ref|ZP_08618507.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
1_1_57FAA]
gi|330404939|gb|EGG84477.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
3_1_46FAA]
gi|336017376|gb|EGN47138.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
1_1_57FAA]
Length = 883
Score = 285 bits (730), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 262/971 (26%), Positives = 436/971 (44%), Gaps = 209/971 (21%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q +E K++Y D +L +G + F EDA A++ L G +
Sbjct: 5 TPMMKQYMETKSQYQDCILFYRLGDFYEMFFEDALTASRELEITLTGKNCGQEEKAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT---LEA 201
+P + ++ RLV G+KV + +Q E G R + + T T +A
Sbjct: 65 VPYHAVEGYLNRLVAKGYKVAICEQVEDPKT------TKGIVKREVVRIVTPGTNLDTQA 118
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
++ ++NY++C+V D R GV +ISTGD E
Sbjct: 119 LDET---------KNNYIMCIV------------YIAD----RYGVSVADISTGDYFVTE 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPL---------------------------SKQTE 294
D + L + SP+E++ + +
Sbjct: 154 IPDS---AKLLDEIYRFSPSEIICNEAFYMSGVDMDGMKDRLGITIYSLESWYFDDEVCR 210
Query: 295 KMLLAYAGPASNVRVECASRDC-FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 353
K LL + +S + A DC I GAL + + +++LSN
Sbjct: 211 KKLLEHFEVSSFAGLGLADYDCGIISAGALLQYLL---ETQKNSLSN------------- 254
Query: 354 HRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQL 413
+ H+ + + M + +S R L+
Sbjct: 255 ----------------------LTHITPYAAGKFMMIDSSTR------------RNLELC 280
Query: 414 EVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMG 473
E LR + G+LL +++ T T G+R LR++V PL D+ I RLDAV E+ E
Sbjct: 281 ETLREK---QKRGSLLWVLDKTKTAMGARTLRKYVEQPLIDKTEIIRRLDAVQELKEQAI 337
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFI 533
S E + ++ LS V D++R IT+I + +A P +
Sbjct: 338 S---REEIREY-----------------LSPVY-------DLERLITKIAYGSANPRDLT 370
Query: 534 A------VMQAILYAGKQ-----LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
A ++ A+LY ++ L+ L +D + E + L+K+ I P +
Sbjct: 371 AFRSSLEMLPALLYILQEMKAELLKDLAVDLDPLEDL------CILVKKAI--REDPPI- 421
Query: 583 GKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
A +G+++N +G EV + R+A K+ L L N R++ G
Sbjct: 422 -------------AMKEGNIIN-----DGYNEEVDKLRRAKSDGKDWLAKLENDEREKTG 463
Query: 643 MRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
++NL+ + +E+ ++K VP + + + RY +PE+ D + A ++
Sbjct: 464 IKNLKIKYNKVFGYYLEVTNSYKEMVPEYYTRKQTLANAERYITPELKELEDMILGAEDK 523
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV 760
L + + Q +A+AALD +LA ++ N+VRP +E
Sbjct: 524 LYALEYELYSEVRDLIASQIERIQKTAKAVAALDAFASLALVAERNNYVRPKI---NEKG 580
Query: 761 QIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMA 819
I I GRHPV++ ++ + F+ NDT L ++ IITGPNM GKS Y+RQ ALI +MA
Sbjct: 581 VIDIKEGRHPVVERMIPNEMFISNDTYLDDKKHRISIITGPNMAGKSTYMRQTALIALMA 640
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q+GSFVPA SA + + D I+TR+GASD + G+STF+ E+ E + ILRN T++SL+I+DE
Sbjct: 641 QIGSFVPAKSANIGLSDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDE 700
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
+GRGTST DG++IA+A ++Y+ + + LF THY ++ +++ K +V Y ++
Sbjct: 701 IGRGTSTFDGLSIAWAVIEYISDSRLLGAKTLFATHYHELTELEGKI-DNVNNYCIA--- 756
Query: 938 SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE- 996
+ K D D+ +L K+V G ++ S+G +VA+LA +P I RA I +L E
Sbjct: 757 -------VKEKGD-DIVFLRKIVKGGADKSYGIQVAKLAGVPELVIGRAKEIVEELSDED 808
Query: 997 VSSRVQNRSAK 1007
+++RV ++K
Sbjct: 809 ITARVSEIASK 819
>gi|323343693|ref|ZP_08083920.1| DNA mismatch repair protein MutS [Prevotella oralis ATCC 33269]
gi|323095512|gb|EFZ38086.1| DNA mismatch repair protein MutS [Prevotella oralis ATCC 33269]
Length = 887
Score = 285 bits (730), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 260/932 (27%), Positives = 423/932 (45%), Gaps = 142/932 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------AHLDHNFMTA 143
TP+ +Q +K K+PD LL+ G + +GEDA +A VLGI L + A
Sbjct: 9 TPMMKQFFSMKAKHPDALLLFRCGDFYETYGEDAVRSAGVLGITLTKRNNGGLSGSTEMA 68
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSALYTK 196
P L+ ++ +L+ AG +V + Q E K G G RG++ L T
Sbjct: 69 GFPHHALDTYLPKLIRAGMRVAICDQLEDPKKKREAIKGMKGLTEMDKMVKRGITELVTP 128
Query: 197 ATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
+ ++V + E+N+L V + GK GV ++ISTG+
Sbjct: 129 G-VAMTDNVLNYK-----ENNFLAAV-----HFGK-----------SSCGVSFLDISTGE 166
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDC 316
+ GE + ++ E +L + SP E+L + E+ +R C
Sbjct: 167 FLTGEGSYDYV----EKLLGNFSPKEVLYDREHKADFERFF--------------GTRYC 208
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMD---VPEQGNHRSAIEGIMNMPDLAVQALA 373
L + + + + L + E +++ V N A IM ++
Sbjct: 209 IF---ELEDWVFTEQTARQKLLRHFETKSLKGFGVEHLHNGIIASGAIMQYLEITQHTQI 265
Query: 374 LTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
I L + ER + L T++ LE+++ G +LL +++
Sbjct: 266 GHITSLSRIEEERYV---------------RLDKFTIRSLELIQPMQEGG--SSLLSVID 308
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T T G R+LRRWV PL D I RL+ V D
Sbjct: 309 RTSTPMGGRMLRRWVVFPLRDEKAIERRLNVV------------------------DFFF 344
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI-LYAGKQLQQLHID 552
EPQF ++ ++G D++R I+R+ +P E + + A+ + L D
Sbjct: 345 REPQFRQLIDEKFHNIG---DLERIISRVAAGRVSPREVVQLKNALQALVPIKAACLETD 401
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
E +++ S+ L I P +LLS +GD +I++G
Sbjct: 402 NESLKRLGSQLNLCEELSDRIAKEIQP----DPPQLLS--------KGD-----VIADGY 444
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNW 670
+++ R +S K+ L + Q G+ +L+ F +V G + KVP W
Sbjct: 445 SADLDELRHISRSGKDFLLEIQEREIAQTGIASLKVGFNNVFGYYLEVRNTYKDKVPAEW 504
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + + RY + E+ +++ A+E++ + + + + Y Q +
Sbjct: 505 IRKQTLAQAERYITQELKEYEEKILGADEKIQSLEERLFGELIADMQAYIPYIQTDANVV 564
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLH 788
A LDCL + A + +VRPV VDD + + I GRHPV++ L + +VPND L
Sbjct: 565 AQLDCLLSFAKTAEENRYVRPV-VDDSDVLDIK--QGRHPVIENQLPVGETYVPNDIYLD 621
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E++ IITGPNM GKS +RQ ALI ++AQ+GS+VPA A++ ++D ++TR+GASD+I
Sbjct: 622 TEKQQIVIITGPNMAGKSALLRQTALIVLLAQMGSYVPAERAKVGLVDKVFTRVGASDNI 681
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--C 906
G STF+ E+ EA+ IL N + +SLV+ DELGRGTST+DG++IA+A +++L E K
Sbjct: 682 SLGESTFMVEMTEAASILNNVSQRSLVLFDELGRGTSTYDGISIAWAIVEFLHEQPKARA 741
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ +++ F + Y+VS + D V +L K+ G SE
Sbjct: 742 RTLFATHYHELNEMEKNF-ARIKNYNVSV-----------KEIDGKVIFLRKLEKGGSEH 789
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
SFG VA +A +P S + RA + +LEA+ S
Sbjct: 790 SFGIHVADIAGMPKSIVKRANTVLKELEADNS 821
>gi|156837100|ref|XP_001642584.1| hypothetical protein Kpol_1075p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113131|gb|EDO14726.1| hypothetical protein Kpol_1075p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 1251
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 254/959 (26%), Positives = 422/959 (44%), Gaps = 113/959 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P+ P TL PSS K+T E+Q E+K+K D ++ + G F + +DA +
Sbjct: 302 PEYDPRTLY---IPSSAWN---KFTAFEKQYWEIKSKMWDCVVFFKKGKFFELYEKDAML 355
Query: 126 AAKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA 183
+ L I N A IP + + + G+KV V Q E+ K G
Sbjct: 356 GNSLFDLKIAGGGRANMQLAGIPEMSFDYWSSQFIQYGYKVAKVDQRESMLAKEMREGSK 415
Query: 184 GPFGRGLSALYTKATLEAAE----DVGGGEDGCGGE-SNYLVCVVDDDGNVGKIRNGVFG 238
G R L + T TL D+ E NY C +D N+ I +
Sbjct: 416 GIVKRELECVLTSGTLTDGSMLHSDLATYCMAIREEPGNYYTC---NDENIVSIEETMSK 472
Query: 239 DGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKML 297
F GV ++ +TG++ EF D S + ++ + P E+++ + LS +K++
Sbjct: 473 KIF----GVAFIDTATGELQMLEFEDDKECSKFDTLMSQIKPKEVIMEKNNLSNLAQKIV 528
Query: 298 LAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA 357
+ P A + G + Y+ + + +N EQ +
Sbjct: 529 KFNSSPQ-------AIFNYMKPGTEFYDFHRTYDELLKP-------ENAYFEEQSEWPTI 574
Query: 358 IEGIMNM-PDLAVQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQL 413
++ N + A + +LK L+ ++ LG + + M L TLQ L
Sbjct: 575 LQKYYNNGKQVGFSAFGGLLNYLKWLKLDSSLISLGNMKEYNLIKSQHSMILDGVTLQNL 634
Query: 414 EVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMG 473
E+ N +GS+ GTL + N +T G R +R WV HPL + I RLD+V ++ +
Sbjct: 635 EIFSNTFDGSDKGTLFKLFNRAITPMGKRTMRTWVMHPLLHKADIDKRLDSVEQLLD--- 691
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFI 533
+P + S L+ + PD++R ++RI T +F
Sbjct: 692 ---------------------DPVLRDLFESHLSKI---PDLERLLSRIHAGTVKMKDFD 727
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN 593
V+Q K L K++++ + AL + ++ ++ AK + +
Sbjct: 728 KVIQGFETIVKLLT----------KISNQNFNGAL--GVFVSQIPESLFQDVAKWTNAFD 775
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+E A D++ +F E K ++ E+L+ + +K+ + F
Sbjct: 776 REKAIVEDVMEPHSGVEPEFDESLDKIKGIE---EDLNDHLRRYKKEFKCSTIHFKDSGK 832
Query: 654 ITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
+ IE+P A +P +W ++ + K + RY+S EV +A A E I+ + +
Sbjct: 833 EIYTIEVPMAATKLIPSSWMQMGANKSSKRYYSEEVSKLARSMAEARESHKIIEQDLKNR 892
Query: 712 FLKEFGGYY-AEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQ------- 761
K+F +Y + ++A++ +DCL ALA S + RP VD+ +P
Sbjct: 893 LSKKFHSHYKTSWMPTIEAISKIDCLIALARTSESLGAPSCRPQLVDEIDPATGAKLNGY 952
Query: 762 IHICSGRHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMA 819
+ S RHP L + + F+PND L + ++TG N GKS +R + IMA
Sbjct: 953 LKFKSLRHPCFNLGSTSIKEFIPNDIELGKDVPQLGLLTGANAAGKSTILRMTCVAVIMA 1012
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q+G +VP SA + +D I TR+GA+D+I QG+STFL EL+E IL T +SL+++DE
Sbjct: 1013 QIGCYVPCESATMTPVDKIMTRLGANDNIMQGKSTFLVELSETKKILDVATNRSLLVLDE 1072
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
LGRG S++DG AIA + L ++ H + + F THY GS+G +S+
Sbjct: 1073 LGRGGSSNDGFAIAESVLYHVATHMQSLGFFATHY-----------GSLG---LSFKGHP 1118
Query: 940 KV----MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+V M + + +++T+LYK+V G SE SFG VA + +P + A V A E
Sbjct: 1119 QVRPLKMSILVDEGTRNITFLYKLVEGQSEGSFGMHVASMCGIPKKIVDNAQVAAETYE 1177
>gi|326914905|ref|XP_003203763.1| PREDICTED: DNA mismatch repair protein Msh6-like [Meleagris
gallopavo]
Length = 1289
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 267/972 (27%), Positives = 453/972 (46%), Gaps = 109/972 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP ++ +LK++ D ++ +VG + + DA + LG+ + ++ + P
Sbjct: 336 KCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVIGVNELGLI-FMKGSWAHSGFPE 394
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAI-KAHGPGKAGP------FGRGLSALYTKAT-L 199
LV G+K+ V+QTET + +A A P R + + TK T
Sbjct: 395 TAFGRFSAILVQKGYKIARVEQTETPEMMEARCKATAHPTRFDKVVRREICRILTKGTQT 454
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
+ D E+ + YL+CV + + + G+ V+G V V+ S G
Sbjct: 455 YSIIDCDPSEN----HNKYLLCVKEKEDSSGQ---RVYG--------VCFVDTSVGKFYV 499
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
G+F+D S ++ +P ++L + L+ T+K+L + C
Sbjct: 500 GQFSDDRHCSRFRTLVAHYTPVQVLFEKGNLTVDTQKIL-------KGSLISCIQEGLIS 552
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN-HRSAIEGIMNMPD----------- 366
G + +L + E+ N++ PE G S I+ + + D
Sbjct: 553 GSQFWSASKTLKVLLEEEYFKENQN-----PENGCVLPSVIKSLTSESDSLGLTPGENSE 607
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASF-----------RSLSGS-------MEMTLSAN 408
LA+ AL + +LK+ +++ + A+F ++ S S M L
Sbjct: 608 LALSALGGIVFYLKKCLIDQELLSLANFEKYVPVDADNAKTASASNFFARTDRRMVLDGV 667
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL LEVL+N +NG+ GTLL ++ T +G RLL++W+ PLC+ I+ RLDAV ++
Sbjct: 668 TLMNLEVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPTSINDRLDAVEDL 727
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
+ + +H +K D+ + + + I S + + PD R I +
Sbjct: 728 ---LAVPAKLTEISEHLKKLPDLERLLSKIHSIGSPLKSQ--NHPD-SRAI--FYEEIKY 779
Query: 529 PSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL 588
+ IA + L K + ++ +D E+V S S +LK+L+ T + G+ L
Sbjct: 780 SKKKIADFLSALEGFKVMNEI-VDA--MEEVASD-FKSQVLKQLV-TRKAKHPDGRFPDL 834
Query: 589 LSTVNK--EAADQGDLLNLMIIS--NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
+ + + A D +I+ G S+ +A + +++ +E+ + ++ RK LG++
Sbjct: 835 SAELKRWDTAFDHNQARKTGVITPKAGFDSDYDKALQDIKTVEEDFRAYLDKQRKLLGVK 894
Query: 645 NLEFMSVSGITHLIELPA---NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
++ + + +E+P + +P + ++ K RY + E+ L +L A E
Sbjct: 895 SVLYWGTGKNRYQMEIPETAISRNLPEEYELKSTRKGYKRYWTKEIEKMLAELINAEERR 954
Query: 702 TIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVF---VDD 756
+ F ++Q AVQ +A LD L +LA S++ + RPV VD
Sbjct: 955 DAALKDCMRRLFYNFDKNSQDWQTAVQCIAVLDVLMSLANYSQDGDGPLCRPVILLPVDS 1014
Query: 757 HEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAERE------YCQIITGPNMGGKSCYI 809
PV + + + RHP + T D+F+PND + ++ E C ++TGPNMGGKS +
Sbjct: 1015 APPV-LELKNARHPCITKTFFGDDFIPNDIVIGSKDEDGGSEASCVLVTGPNMGGKSTLM 1073
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
RQ L+ IMAQ+G +VPA L +D ++TR+GASD I G STF EL+E S IL++
Sbjct: 1074 RQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHA 1133
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG 929
T SLV+VDELGRGT+T DG AIA A + L E+ KC LF THY + + ++GS
Sbjct: 1134 TEHSLVLVDELGRGTATFDGTAIASAVVRELAENIKCRTLFSTHYHSLVE---DYSGSAA 1190
Query: 930 TY--HVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
H++ + ++ P S + +T+LYK + G S+GF A+LA +P I +
Sbjct: 1191 VRLGHMACMVENESEDP----SQETITFLYKFIEGACPKSYGFNAARLADIPEEVIQKGH 1246
Query: 988 VIAAKLEAEVSS 999
A + E + S
Sbjct: 1247 RKAREFEEKTMS 1258
>gi|34539964|ref|NP_904443.1| DNA mismatch repair protein MutS [Porphyromonas gingivalis W83]
gi|419970326|ref|ZP_14485825.1| DNA mismatch repair protein MutS [Porphyromonas gingivalis W50]
gi|44888163|sp|Q7MXR7.1|MUTS_PORGI RecName: Full=DNA mismatch repair protein MutS
gi|34396275|gb|AAQ65342.1| DNA mismatch repair protein MutS [Porphyromonas gingivalis W83]
gi|392610997|gb|EIW93751.1| DNA mismatch repair protein MutS [Porphyromonas gingivalis W50]
Length = 891
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 275/990 (27%), Positives = 465/990 (46%), Gaps = 155/990 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL +Q ++K K+PD +L+ VG + F EDA +A+++LGI N A
Sbjct: 8 TPLMRQYFQIKQKHPDAILLFRVGDFYETFSEDAIVASEILGITLTRRANGAAQFVELAG 67
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAE 203
P L+ ++ +LV AG +V + Q E P K RG++ L T + +
Sbjct: 68 FPHHALDTYLPKLVRAGKRVAICDQLED-------PKKTKTLVKRGITELVTPG-VSTND 119
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+V + E+N+L V + GK VFG + ++ISTG+ + G+ N
Sbjct: 120 NVLSHK-----ENNFLAAV-----SCGK---EVFG--------ISLLDISTGEFMAGQGN 158
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ E +L + P E+L+ +++E+ D F G +
Sbjct: 159 ADYV----EKLLTNYRPKEILV-----ERSER---------------SRFNDLFHWSGFI 194
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL---K 380
++ ED ++E+ + V + + +S + +AV A + +L +
Sbjct: 195 FDM--------EDWAFSSENNRLRVLKHFDLKSLKGFGLEELSMAVTAAGAVLNYLDLTQ 246
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
L+ I L L + + L T++ LE+L + G + +LL I++HT+T G
Sbjct: 247 HHQLQHITSLS----RLDENRYVRLDKFTVRSLELLSPMNEGGK--SLLDIIDHTITPMG 300
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+R +R+W+ PL D I AR R E +H E+ +
Sbjct: 301 ARRIRQWIVFPLKDPARIQAR-------------QRVVEFFFRHPEERA----------- 336
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--HIDGEYREK 558
I++ LT +G D++R +T+ +P E + ++ L A + ++++ H D E
Sbjct: 337 IIAEHLTEIG---DLERLVTKGAMGRISPREMVQ-LRVALQALEPIKEVCTHADEENLRT 392
Query: 559 VTSKTLHSALLKRLIL---TASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+ K L+ IL +PA +G+ +I++G +
Sbjct: 393 LGGKLELCKELRDKILREVMPDAPAALGRGP--------------------VIAHGVDAT 432
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKV 673
+ R S K+ L L ++ G+ +L+ + + IE+ K VP W +
Sbjct: 433 LDELRALAYSGKDYLIKLQQQEIERTGIPSLKVAYNNVFGYYIEVRNTHKDKVPAEWIRK 492
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY + E+ ++ A E++ + + + E Y A Q QA+A+L
Sbjct: 493 QTLVSAERYITEELKEYEAKILGAEEKIAALEGQLYALLVAELQRYVAPLQQDSQAVASL 552
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNLHAER 791
DCL + A +R F+ PV VD E I I +GRHPV++ L + ++ ND L +R
Sbjct: 553 DCLLSFAESARRYRFICPV-VD--ESFTIDIKAGRHPVIEQQLPADEPYIANDIYLDTDR 609
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
+ I+TGPNM GKS +RQ ALI +MAQ+GSFVPA SA + ++D I+TR+GASD+I G
Sbjct: 610 QQVIIVTGPNMSGKSALLRQTALISLMAQIGSFVPAESARIGMVDSIFTRVGASDNISMG 669
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVL 909
STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA++ ++Y+ ++ K L
Sbjct: 670 ESTFMVEMQEASNILNNLTPRSLVLFDELGRGTSTYDGISIAWSIVEYIHDNPKAHPRTL 729
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ +++ G + H +++ +V G M +L K+ PG S SFG
Sbjct: 730 FATHYHELNELE----GQLDRVHNFNVSAREVDGKM--------LFLRKLEPGGSAHSFG 777
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMP--- 1026
+VA+L +P + RAT I +LE E + +D S++ + A +P
Sbjct: 778 IQVARLGGMPHHIVQRATDILHRLEQEREKIEEEEPKTKDTKRGPSEKVKNASPTLPRDE 837
Query: 1027 --VSPESFYLGRVEASEDLISAYRDLFLNL 1054
S + + L + + ++S R+ L+L
Sbjct: 838 KGRSIDGYQLSFFQLDDPVLSQIREEILDL 867
>gi|197301744|ref|ZP_03166814.1| hypothetical protein RUMLAC_00470 [Ruminococcus lactaris ATCC 29176]
gi|197299184|gb|EDY33714.1| DNA mismatch repair protein MutS [Ruminococcus lactaris ATCC 29176]
Length = 877
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 266/948 (28%), Positives = 436/948 (45%), Gaps = 171/948 (18%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
+Q +E K++Y D +L +G + F EDA A++ L G + +P
Sbjct: 3 KQYMETKSQYQDCILFYRLGDFYEMFFEDALTASRELEITLTGKNCGQEERAPMCGVPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKAT---LEAAED 204
+ ++ RLV G+KV + +Q E P +A G R + + T T +A ++
Sbjct: 63 AVEGYLNRLVAKGYKVAICEQVE-------DPKQAKGIVKREVVRIVTPGTNLDTQALDE 115
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
++NY++C+V D R GV +ISTGD E D
Sbjct: 116 T---------KNNYIMCIV------------YIAD----RYGVSIADISTGDYFVTELPD 150
Query: 265 GFLRSGLEAVLLSLSPAELLL-------GQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
G S L + SP+E++ G L EK+ + S + R+
Sbjct: 151 G---SRLMDEIYKFSPSEIICNEAFYMSGMDLDTMKEKLGITIYSLDSWYFDDAMCREKL 207
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT-I 376
+ ++ L ED + V G + + L Q +L+ +
Sbjct: 208 LEHFKVSSFAGL----------GLEDYDCGVISAGALLTYL--------LETQKNSLSNL 249
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
HL + + M L +S R L+ E LR + G+LL +++ T
Sbjct: 250 THLTPYVTGKYMMLDSSTR------------RNLELCETLREK---QKRGSLLWVLDKTR 294
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G+R LR++V PL D+N I+ RLDAV E+ E S E + ++
Sbjct: 295 TAMGARTLRKFVEQPLIDKNEINRRLDAVEELKEQAIS---REEIREY------------ 339
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA------VMQAILYAGKQ----- 545
LS V D++R IT+I + +A P + A ++ I Y ++
Sbjct: 340 -----LSPVY-------DLERLITKITYGSANPRDLTAFKSSLEMLPPIRYILEEMKVPL 387
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
LQ+++ D + E + L+ + I P + A +G+
Sbjct: 388 LQEIYEDLDALEDLCD------LVTKAI--REEPPI--------------AMKEGN---- 421
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK 665
II G EV + R+A K+ L L R++ G++NL+ + +E+ ++K
Sbjct: 422 -IIREGYNEEVDKLRRAKSDGKDWLAKLEEDEREKTGIKNLKIKYNKVFGYYLEVTNSYK 480
Query: 666 --VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
VP + + + RY +PE+ D + A ++L + + +
Sbjct: 481 DLVPDYYTRKQTLANAERYITPELKELEDMILGAEDKLYALEYELYSEVRETIAAQVERI 540
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVP 782
Q +A+A LD +LA ++ ++VRP +E I I GRHPV++ ++ D F+
Sbjct: 541 QKTAKAVAGLDVFTSLALVAERNHYVRPKI---NEKGIIDIKEGRHPVVEKMIPNDMFIS 597
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
NDT L ++ IITGPNM GKS Y+RQ ALI +MAQVG FVPA SA + + D I+TR+
Sbjct: 598 NDTYLDDKKNRISIITGPNMAGKSTYMRQTALIALMAQVGCFVPAQSANIGLSDRIFTRV 657
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD + G+STF+ E+ E + ILRN T++SL+I+DE+GRGTST DG++IA+A ++Y+ +
Sbjct: 658 GASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVVEYISD 717
Query: 903 HK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
K LF THY ++ +++ K +V Y ++ + K D D+ +L K+V
Sbjct: 718 SKLLGAKTLFATHYHELTELEGKIE-NVNNYCIA----------VKEKGD-DIVFLRKIV 765
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE-VSSRVQNRSAK 1007
G ++ S+G +VA+LA +P I+RA I +L E ++SRV +A+
Sbjct: 766 KGGADKSYGIQVAKLAGVPDLVINRAKEIVEELSDEDITSRVSEIAAR 813
>gi|421076048|ref|ZP_15537050.1| DNA mismatch repair protein mutS [Pelosinus fermentans JBW45]
gi|392525907|gb|EIW49031.1| DNA mismatch repair protein mutS [Pelosinus fermentans JBW45]
Length = 864
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 246/921 (26%), Positives = 427/921 (46%), Gaps = 139/921 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLD---HNFMTAS 144
KYTP+ +Q +E+K+K+ + +L +G + F DAE+A++ L I
Sbjct: 4 KYTPMMEQYLEIKSKHENEILFFRMGDFYEMFFTDAELASRELEITLTARDGGQRVPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
IP + ++ +L++ G+KV + +Q E P +A G R + + T T+ AE
Sbjct: 64 IPYHAADTYIAKLISKGYKVAICEQVE-------DPKQAKGIVKREVIKIITPGTI-IAE 115
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
++ + D++ N + + L + A +ISTG+ ++ F
Sbjct: 116 NL----------------LPDNNNNYLAVLYEE-----EEELILAAADISTGECLWATFL 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ L L L P EL+L + + EK+ SN C I L
Sbjct: 155 GSQRLTALYDQLFRLMPTELVLASKI-ENIEKL----NTFISNRISHCTHTTLAIDNLKL 209
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF- 382
+ M +D +P+Q D+A+ A+ + +L Q
Sbjct: 210 VSDLPKQHFMMDD-----------LPQQ--------------DVALAAIGCLLYYLHQTV 244
Query: 383 -----GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+ R++ A F L T+ + +++ LEV RN +G + TLL+++++T T
Sbjct: 245 KTDLSHINRLINYNA-FEYL------TIDSTSMRNLEVTRNVRDGGKKDTLLYVLDYTKT 297
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G RLL++W+ +PL + I R D+++E+ E +P
Sbjct: 298 AMGGRLLKKWLEYPLMNTTHIIQRQDSIAELLE------------------------KPT 333
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+ L ++ D++R +TRI TA+ + IA+ +++ +QL +
Sbjct: 334 LRQTIHETLANIY---DLERILTRIEVGTASARDLIALKSSLVVLPTIKEQL----QKTN 386
Query: 558 KVTSKTLHSALLKRL-ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
+ LH L + ++T A++ + +G L I G E+
Sbjct: 387 TIFLSNLHFYLHTHVDLVTLVDTAIVDNPPF--------SVREGGL-----IKRGYDLEL 433
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVN 674
+ +K+ + + R+ G+++L+ + IE+ + VPL++ +
Sbjct: 434 DELHTIARDSKQFVQDIETRERENTGIKSLKVGYNKVFGYYIEVTHSHTASVPLSYVRKQ 493
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY +PE+ ++ A E++ + + Y E Q + LA LD
Sbjct: 494 TLANAERYITPELKEFESKILGAQEKIVTIEYRLFSKIRDHIKVYIKEIQETARQLAQLD 553
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREY 793
+ +L+ ++ N++RP E I I GRHP+++ +L + FVPND+ L+
Sbjct: 554 AIISLSEVAFRNNYIRPTITQTRE---ITIKDGRHPIVERLLKRELFVPNDSELNHHSNE 610
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS Y+RQVAL+ +MAQ+GSF+PA A + +D I+TR+GASD + G+S
Sbjct: 611 IMIITGPNMAGKSTYMRQVALLVLMAQIGSFIPAREAIISPVDRIFTRVGASDDLSTGQS 670
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+NE + IL++ T+QSL+I+DE+GRGTST DG++IA A ++Y+ E K LF TH
Sbjct: 671 TFMVEMNEVAQILKHATSQSLIILDEIGRGTSTFDGMSIARAVIEYIKERVKAKTLFATH 730
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ ++ + V Y V+ + DV +L +++PG ++ S+G VA
Sbjct: 731 YHELTEL-ADYHKIVKNYSVAV-----------KERGSDVVFLRRIIPGGADKSYGIHVA 778
Query: 974 QLAQLPPSCISRATVIAAKLE 994
QLA LP I RA + +LE
Sbjct: 779 QLAGLPQKVIKRAQELLVELE 799
>gi|159900591|ref|YP_001546838.1| DNA mismatch repair protein MutS [Herpetosiphon aurantiacus DSM 785]
gi|159893630|gb|ABX06710.1| DNA mismatch repair protein MutS [Herpetosiphon aurantiacus DSM 785]
Length = 928
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 258/963 (26%), Positives = 431/963 (44%), Gaps = 137/963 (14%)
Query: 92 LEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL-----DHNFMTASIP 146
+ QQ + +K KY DV+L +G + FG+DA++ A+VL I + D N A +P
Sbjct: 6 MWQQYLSIKQKYADVILFFRLGDFYETFGDDAKLIAEVLDITLTVRGLSSDENTPMAGVP 65
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS-ALYTKATLEAAEDV 205
+ ++ +LV+ G++V + +Q + H + R ++ T+ T+ AE
Sbjct: 66 YHAADNYIEQLVSRGYRVAICEQMDEMV---HKTLQKREVVRIVTPGTLTEPTMLQAE-- 120
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
++YL ++ D GNVG + +++TG+ E
Sbjct: 121 ---------RNSYLAAILVDRGNVG----------------LAYADLTTGEFCATELRGN 155
Query: 266 FLRSGLEAVLLSLSPAELLLGQ---------------------PLSKQTEKMLLAYAGPA 304
LE L L AELL+ P+ K + LL + A
Sbjct: 156 EALKQLEGELARLGAAELLVSDAPELRPAGMEIAKKQLAQDLAPMRKAERERLLPHERTA 215
Query: 305 SNVRVECASRDCFIGGGALAEVMSLYE-NMGEDTLSNN-EDQNMDVPEQGNHRSAIEGIM 362
+VE + ++ G ++ D L N + Q++D GN
Sbjct: 216 K--KVEGNNESTWVQGNVTQWPNWHWDARTARDALLNQFKSQSLDGFGLGNKA------- 266
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
LA +A I++L + + + + S R + M L T + LE L + G
Sbjct: 267 ----LATRAAGALIQYLHETQRDSVAQV-RSLRVYDTTRFMFLDPQTRRNLE-LTEGAGG 320
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
G+L+ +++ T T G+RLLR+W++ PL + ++ R AVS E
Sbjct: 321 QRKGSLIAVLDQTRTPMGARLLRQWISQPLIELGPLTERQQAVSCFVEE----------- 369
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
T+V + + V DI+R I R+ ATP + + + +A+
Sbjct: 370 ---------TLVRGELRALFKGV-------GDIERTINRVVQGIATPRDLVRLREALRLT 413
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
L Q+ G + TS T + L + I A + + + AD
Sbjct: 414 PDILSQIERTGL---RSTSPTEAAPSDDDLFDDEPTSNQIDACADICELLEQAIADDPPA 470
Query: 603 L---------NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
L + +I G +E+ +A + A ++ L +++ G++ L+
Sbjct: 471 LLGTWDNARSDENVIRKGHAAEIDAIVEATRDAARWINELEAKEQQRTGIKTLKVSYNKV 530
Query: 654 ITHLIEL---PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ IE+ ++P ++ + + RY +PE+ + A+E L R A+
Sbjct: 531 FGYYIEVTKASGETRIPDDYIRKQTLVNAERYITPELKEYESLILNASEALNEKERQAFR 590
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVF-VDDHEPVQIHICSGRH 769
L+ +A+A D LA ++ + FVRP +DD +Q GRH
Sbjct: 591 LILRHLANAGNRLLDLARAIAEFDVYSTLAEVAVRQRFVRPTLRLDDVFVIQ----GGRH 646
Query: 770 PVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
PV++ L + F PND + A+ + ++TGPNM GKS ++RQVALIG+MAQ+GSFVPA
Sbjct: 647 PVVEHNLNEPFTPNDAHFDADHQII-VLTGPNMSGKSTFLRQVALIGLMAQIGSFVPADY 705
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
AE+ +LD I+TR+GA D I G+STF+ E+ E + IL N + +SL+I+DE+GRGTST+DG
Sbjct: 706 AEIGLLDRIFTRIGAQDDIATGQSTFMVEMIETANILHNGSPRSLIILDEIGRGTSTYDG 765
Query: 890 VAIAYATLDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
++IA A ++Y+ + LF THY ++ T+ + H L +
Sbjct: 766 LSIARAVVEYIHNQPRLRAKTLFATHYHEL----TELANILPRVHNWTLAV--------A 813
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
+ V +L KV+ G ++ S+G VAQ+A LPP+ I RAT + ++LE + R Q R A
Sbjct: 814 EEGDHVVFLRKVIEGAADRSYGIHVAQMAGLPPAVIKRATEVLSELEGK-GDREQRREAM 872
Query: 1008 RDL 1010
R +
Sbjct: 873 RRM 875
>gi|300794942|ref|NP_001179666.1| DNA mismatch repair protein Msh6 [Bos taurus]
gi|296482664|tpg|DAA24779.1| TPA: mutS homolog 6 [Bos taurus]
Length = 1360
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 257/986 (26%), Positives = 434/986 (44%), Gaps = 138/986 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP ++ ++K++ D+++ +VG + + DA + LG+ + N+ + P
Sbjct: 406 TPGMRKWWQIKSQNFDLVIFYKVGKFYEMYHMDALIGVSELGL-VFMKGNWAHSGFPEIA 464
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIK-------AHGPGKAGPFGRGLSALYTKATLEAA 202
+ LV G+KV V+QTET + AH R + + TK T +
Sbjct: 465 FGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS 524
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
G D S YL+ + + + G GV V+ S G G+F
Sbjct: 525 VLEG---DPSENYSKYLLSLKEKEEE---------SSGHTRVYGVCFVDTSLGRFFIGQF 572
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+D S ++ P ++L + KM+L + + + ++ I G
Sbjct: 573 SDDRHCSRFRTLVAHYPPVQVLFEKGNLSMDTKMILKSSLSS-------SLQEGLIPGSQ 625
Query: 323 LAEVMSLYENMGEDTL---SNNEDQNMDVPEQGNHRSAIEGIMNMPD-----------LA 368
+ + E+ NED + +P+ ++G+ + D LA
Sbjct: 626 FWDAAKTLRTLLEEGYFIDKLNEDGGVMLPQ------VLKGMTSESDSIGLTPGEKSELA 679
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSL------------------SGSMEMTLSANTL 410
+ AL + +LK+ +++ + A+F + M L A TL
Sbjct: 680 LSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHATRPGAVFAKANQRMVLDAVTL 739
Query: 411 QQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE 470
LE+ N +NGS GTLL ++ T +G RLL++W+ PLC+ + I+ RLDA+
Sbjct: 740 NNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPHAINDRLDAIE---- 795
Query: 471 SMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP- 529
D+ +V + +S V+ L + PD++R +++I H +P
Sbjct: 796 -------------------DLMVVPDK----ISEVVDLLKKLPDLERLLSKI-HNVGSPL 831
Query: 530 -----SEFIAVM-QAILYAGKQLQQL-----------HIDGEYREKVTSKTLHSALLKRL 572
+ A+M + Y+ K++ I G E + S +LK+
Sbjct: 832 KSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDD--FKSKILKQ- 888
Query: 573 ILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVARARKAVQSAKE 628
+LT + + G+ L S +N+ ++ L+ G S+ +A ++ ++
Sbjct: 889 VLTLQTKSPEGRFPDLTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQ 948
Query: 629 ELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYHSP 685
L + R ++G R + + + + +E+P NF +P + ++ K RY +
Sbjct: 949 SLLEYLEKQRSRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTK 1008
Query: 686 EVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN 745
+ L L A E + F Y ++QAAV+ +A LD L L SR
Sbjct: 1009 TIEKKLGNLINAEERRDASLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLTNYSRG 1068
Query: 746 KN--FVRPVFV--DDHEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAE-------REY 793
+ RP+ + ++ P + + RHP + T D+F+PND + E + Y
Sbjct: 1069 GDGPMCRPIILLPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAY 1128
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
C ++TGPNMGGKS +RQ L+ IMAQ+G +VPA L +D ++TR+GASD I G S
Sbjct: 1129 CVLVTGPNMGGKSTLMRQAGLLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGES 1188
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF EL+E + IL + TA SLV+VDELGRGT+T DG AIA A + L E+ KC LF TH
Sbjct: 1189 TFFVELSETASILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTH 1248
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y + + ++ +V H++ + ++ P S + +T+LYK + G S+GF A
Sbjct: 1249 YHSLVEDYSQNV-AVRLGHMACMVENECEDP----SQETITFLYKFIKGACPKSYGFNAA 1303
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSS 999
+LA LP I + A + E S
Sbjct: 1304 RLANLPEEVIQKGHRKAREFEKMTQS 1329
>gi|189030692|sp|A8MFD4.2|MUTS_ALKOO RecName: Full=DNA mismatch repair protein MutS
Length = 880
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 256/930 (27%), Positives = 443/930 (47%), Gaps = 129/930 (13%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K TP+ QQ +E+K +Y D L+ +G + F +DAE A++ L I L+
Sbjct: 2 RKLTPMMQQYMEIKNQYKDALMFFRLGDFYELFFDDAETASRELEITLTARDCGLESKAP 61
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
+P N ++ +LV+ G+KV + +Q E ++ G R + + T TL
Sbjct: 62 MCGVPYHAANGYIDKLVSKGYKVAICEQVEDPSVAK------GIVKRDVVRVITPGTLI- 114
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
D ED ++NYLV + G GF V+ISTG+++ E
Sbjct: 115 --DTNLLEDK---KNNYLVSLY----------MSSLGCGFSY------VDISTGELLSTE 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY-AGPASNVRVECASRDCFIGG 320
+ L + + P EL+ ++ +K+ + G + + + D +
Sbjct: 154 IVGTSIEQNLIDEISKIEPNELIY---FVEEEDKIGTNFIEGIRKKLNIHISKYDPW--- 207
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
E++ + N+ +N Q N + ++ L + A I +LK
Sbjct: 208 ------------TFEESYAMNQIKN-----QFNILTVESLGFSLNHLGINATGALIHYLK 250
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+R + + + +M L +T + LE+ ++ G+LL I++ T T G
Sbjct: 251 STQ-KRTLSHINKINIYTFTEKMVLDISTRRNLELTETIRGKNKKGSLLWILDKTQTAMG 309
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R++R+W+ PL + I+ RL+AV+ + KN + E +
Sbjct: 310 GRMIRKWIEEPLLNIQNINRRLEAVATL------------------KNDILLRCELK--- 348
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
SL + D++R +I +ATP + +A+ +++ + +++L
Sbjct: 349 ------ESLKQIYDLERLSGKIAFGSATPRDLVALKKSVAFL-PDIKKLF---------- 391
Query: 561 SKTLHSALLKRLILTASSPAVIGK--AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
+ +S LLK L+ + I + +L + D G II G E+
Sbjct: 392 -ENENSGLLKELLNNIDTLEDIQALIESSILDEPSISLKDGG------IIKEGYNDELDE 444
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFKV-PLNWAKVNST 676
A + K + L + + G+++L+ + IE+ +N + P N+ + +
Sbjct: 445 LYVAAREGKHWIAKLEQAEKDRTGIKSLKVGYNKIFGYYIEITKSNLHLAPENYIRKQTL 504
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF---QAAVQALAAL 733
RY +PE L L+ L EE +I ++ F++ E Q +A+A L
Sbjct: 505 ANCERYITPE-LKELEDKILGAEEKSIAIE--YEQFIEIRNMLLHEIERIQRTARAVAEL 561
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAERE 792
D L++ A + N+V+P V+ E + I GRHPV++ +L +N F+ NDT ++ E E
Sbjct: 562 DVLYSFAEAASENNYVKPT-VNSSETIDIK--EGRHPVVEKVLENNMFISNDTYINTEDE 618
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
+ITGPNM GKS Y+RQVALI +MAQ+GSFVPA+SA + + D I+TR+GA+D + QG+
Sbjct: 619 QLLMITGPNMAGKSTYMRQVALIILMAQIGSFVPATSATIGITDRIFTRVGANDDLSQGQ 678
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF+ E++E + I+ T +SL+IVDE+GRGTST DG++IA++T +Y+ + LF T
Sbjct: 679 STFMVEMSEMATIVNLATKKSLLIVDEIGRGTSTFDGLSIAWSTAEYICQSLGSRTLFST 738
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ + + G + ++KV+ D +DV +L+KVV G ++ S+G +V
Sbjct: 739 HYHELTKLSETYRG---------IKNYKVLVKEDK---EDVIFLHKVVKGNADRSYGIQV 786
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
A+LA LP + I+RA+ I + LE E + Q
Sbjct: 787 AKLAGLPAAIITRASHILSDLERESIQKEQ 816
>gi|313892582|ref|ZP_07826169.1| DNA mismatch repair protein MutS [Dialister microaerophilus UPII
345-E]
gi|313118979|gb|EFR42184.1| DNA mismatch repair protein MutS [Dialister microaerophilus UPII
345-E]
Length = 852
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 244/956 (25%), Positives = 443/956 (46%), Gaps = 158/956 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMTAS 144
TPL Q +K KY D LL +G + F +DA E+ + G A +
Sbjct: 4 TPLMAQYQSIKDKYEDSLLFYRLGDFYELFYDDAKVVSHELELTLTGKSAGKEGRVPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P ++ RL+ G+KV V +Q E P KA G R + + T T+
Sbjct: 64 VPYHAAENYIYRLIQKGYKVAVCEQLEE-------PKKAKGLVKRDVIRVITPGTILFEN 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYL+ + ++ G + ++ +ISTG+ +G +N
Sbjct: 117 AIADKSN------NYLMYIYEEQGEIV----------------LILSDISTGECSWGIWN 154
Query: 264 DGFLRSGLEAVLLSLSPAELL--LGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ ++ P+E L + + ++T+ + G VR E
Sbjct: 155 AKKELYDMFDMISIYQPSETLCTISDEIYEKTDYFFTSSVGGCLLVRKEYT--------- 205
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
D + N DV N + +A L + +LK
Sbjct: 206 --------------DEIKEN-----DVIYSDNKK------------VQKAFLLLVEYLKD 234
Query: 382 FGLERIMCLGASFRSLSGSME---MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
+ F ++ E + LS T++ LE+ +N +G GTLL ++++T T
Sbjct: 235 V----MKSDSVKFHNIYKLREDHVLHLSEKTIRNLEITKNMRDGGRKGTLLELLDYTSTA 290
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL++W+ PL D N I R + + E+ + ES
Sbjct: 291 MGGRLLKKWLEQPLTDVNRIILRQNGIEELRTHATELQKLES------------------ 332
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
+ SS+ D +R + RI T +P + +++ + K++ ++ +K
Sbjct: 333 --LFSSIF-------DFERILARIEANTTSPKDLLSLKSTL----KEIPEI-------KK 372
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
V S S +LK + + + + L ++N+ G + + I NG E+
Sbjct: 373 VLSGA-SSVILKNINSNIKTHKFVYEL--LDKSMNENGT--GSIRDGKYIKNGYSKELDE 427
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSG----ITHLIELPANFKVPLNWAKV 673
R +++++ + L +++ G++ + F ++ G ITH ++P +P + +
Sbjct: 428 VRSLAENSRKWITELEKSEKEKTGIKLKIGFNNIFGYYFEITHANKIP----IPEYYVRK 483
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY +PE+ ++ +A E+++ + + K+ Y AE Q + +A L
Sbjct: 484 QTLVNAERYITPELKEFEAKVLVAKEKMSELELELYKDIKKQIYPYIAEMQKTARTIAGL 543
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAERE 792
DCL LA + + +++PV ++ + I I GRHP+++ L + F+PND L+ +
Sbjct: 544 DCLSGLARAALKERYIKPV-IECSKNKHILINDGRHPMVEHALKNEMFIPNDIELNHVNQ 602
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
+ITGPNM GKS ++RQVA++ IMAQ+GSF+PA SA + +D I+TR+GA+D I G+
Sbjct: 603 ELLVITGPNMAGKSTFMRQVAVLVIMAQIGSFIPAKSAVISPVDRIFTRVGATDDISTGQ 662
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF+ E+ E S+IL++ T SLV++DE+GRGTST+DG++IA A ++Y ++ LF T
Sbjct: 663 STFMVEMQEVSHILKHATENSLVLLDEIGRGTSTYDGMSIAKAVVEYFDKNIHAYTLFAT 722
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY +++D+ + + + + V+ + +++T+L ++VPG ++ S+G V
Sbjct: 723 HYHELSDMAST-SKKIKNFTVTV-----------KERGEEITFLRRIVPGCADRSYGIHV 770
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVS 1028
A+LA LP S + +A+ I LE++ N+S + ++ K+ E ++EN+ S
Sbjct: 771 ARLAGLPESLLKQASAILDNLESQ-----DNKSLNKTIMEKV---ENTSEENLFTS 818
>gi|305665199|ref|YP_003861486.1| DNA mismatch repair protein [Maribacter sp. HTCC2170]
gi|88709951|gb|EAR02183.1| DNA mismatch repair protein [Maribacter sp. HTCC2170]
Length = 860
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 254/917 (27%), Positives = 421/917 (45%), Gaps = 134/917 (14%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASIPTFR 149
QQ +KTKYPD LL+ VG + FG+DA A+K+LGI +N A P
Sbjct: 2 QQYNTIKTKYPDALLLFRVGDFYETFGKDAVKASKILGIILTHRNNGGDRTELAGFPHHS 61
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGE 209
LN ++ +LV AG +V + Q E + RG++ L T V +
Sbjct: 62 LNTYLPKLVKAGQRVAICDQLEDPKLTK------SIVKRGVTELVTPG-------VALND 108
Query: 210 DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRS 269
D ++N +C V FG LGV ++ISTG+ + E N+
Sbjct: 109 DILNAKTNNFLCAVH------------FGRKL---LGVSFLDISTGEFLTAEGNE----E 149
Query: 270 GLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSL 329
+ +L +L P E+L+ SK +K L G + E
Sbjct: 150 QIAKLLQNLGPNEILV----SKAHKKDFLDIFGQQFHT--------------FFTEDWLF 191
Query: 330 YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHLKQFGLERIM 388
E+ +TL+N+ S ++G ++ + A + + +L + ++
Sbjct: 192 QEDYALETLTNH-----------FKTSTLKGFGVDQITQGIIASGVVLHYLSETQHRQLQ 240
Query: 389 CLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWV 448
+ + + ++ + + T++ LE+ NS TLL +++ T++ G R+L+RW+
Sbjct: 241 HIN-TIKRIAEEEYIWMDRFTIKNLELY--NSTNVNAVTLLDVIDKTISPMGGRMLKRWL 297
Query: 449 THPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTS 508
PL + I R +S Y TSE +L + +
Sbjct: 298 ALPLKNIEKIRRRHQVIS--------YLTSEET-------------------VLQKLQNN 330
Query: 509 LGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE-KVTSKTLHSA 567
+ + D++R I+++ P E + + + L A ++QL + E + +H+
Sbjct: 331 IKKMGDLERLISKVATGKINPKEVVQLKNS-LEAVIPVKQLATNSENEAMNLIGDQIHTC 389
Query: 568 LLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAK 627
L R AK+ +N+EA ++L I+ E+ R S K
Sbjct: 390 DLLR--------------AKIKDMINEEAPI--NILKGNAIAQSYSEELDELRGLAYSGK 433
Query: 628 EELDSLINMCRKQLGMRNLEFMSVSGITHLIEL--PANFKVPLNWAKVNSTKKTIRYHSP 685
E LD ++ ++ G+ +L+ S + + IE+ KVP W + + RY +
Sbjct: 434 EYLDKMLKRETERTGITSLKIASNNVFGYYIEVRNAHKDKVPEEWIRKQTLVNAERYITE 493
Query: 686 EVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN 745
E+ ++ A E + + + + + Y Q Q +A LDCL L++
Sbjct: 494 ELKEYEAKILGAEERILQLEQQLFAQLVVWMQEYIVPVQNNAQQIATLDCLCGFTQLAKE 553
Query: 746 KNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQIITGPNMG 803
++ +P D + I GRHPV++ L + ++ ND L+ E + +ITGPNM
Sbjct: 554 NDYNKPQLND---STSLEIIEGRHPVIEKQLPLGEAYIANDLILNRENQQLIMITGPNMS 610
Query: 804 GKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEAS 863
GKS +RQ ALI ++AQ+GSFVPA SA++ +D I+TR+GASD+I G STF+ E+NE +
Sbjct: 611 GKSAILRQTALIVLLAQMGSFVPARSAKIGYVDKIFTRVGASDNISMGESTFMVEMNETA 670
Query: 864 YILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLFVTHYPKIADIKT 922
IL N + +SL+++DE+GRGTST+DG++IA+A +YL EH + LF THY ++ ++ T
Sbjct: 671 SILNNLSERSLILLDEIGRGTSTYDGISIAWAISEYLHEHPSRSKTLFATHYHELNEMAT 730
Query: 923 KFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSC 982
F + Y+VS + + K V +L K+ PG SE SFG VA++A +P
Sbjct: 731 TFE-RIKNYNVS-------IKELKDK----VLFLRKLTPGGSEHSFGIHVAKMAGMPQQV 778
Query: 983 ISRATVIAAKLEAEVSS 999
I +A I KLE SS
Sbjct: 779 IHKANKILKKLEKSHSS 795
>gi|225620061|ref|YP_002721318.1| DNA mismatch repair protein MutS [Brachyspira hyodysenteriae WA1]
gi|225214880|gb|ACN83614.1| DNA mismatch repair protein MutS [Brachyspira hyodysenteriae WA1]
Length = 887
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 253/940 (26%), Positives = 452/940 (48%), Gaps = 132/940 (14%)
Query: 81 SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNF 140
S+ N+K TP+ +Q E+K KY D +L+ +G + F +DA++ + +LG+ N
Sbjct: 8 SEKEENQKLTPMMRQYKEIKDKYSDSILLFRMGDFYEVFFDDAKIVSDILGLTLTKRANV 67
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATL 199
A +P ++ ++ +LV +G K+ + Q E P A G R ++ + T T+
Sbjct: 68 PMAGVPYHAIDNYLSKLVKSGMKIAICDQME-------DPKTAKGIVKREVTQVITPGTI 120
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
+ + + NYL V+ V K + +ISTG++
Sbjct: 121 SENKYLESKSN------NYLASVI-----VSKSEKNA---------ALSICDISTGELYA 160
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
E N L + EA L + +++ TE+++ P + +E S I
Sbjct: 161 TEINSN-LENHNEA-----------LKEIINELTEEII--RFSPKEIMTIESVSESIII- 205
Query: 320 GGALAEVMSLYENMGEDTLSN-NEDQNMDVPEQGNHRSAIE----GIMNMPDLAVQALAL 374
E+ + + N+ T N + + NH + GI P L + L
Sbjct: 206 ----KEIQNKFNNIFYSTTPNYTAEYSYAYKTLTNHFKTVSLKSFGIEEKP-LLISLLGS 260
Query: 375 TIRHLKQFG---LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
TI ++++ LE I + R S MTL T+ LE+L N + TL
Sbjct: 261 TIFYIQELSKTSLEHISNIKLYNRRDS----MTLDYATIASLEILETIRNDNNKMTLFDT 316
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T T G+R L+R + PL + I+ RL+ V ++
Sbjct: 317 IDRTKTSMGARYLKRIIVEPLLNIEEINKRLNNVEFFYKNQ------------------- 357
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-- 549
+F Y + +L +G DI+R +++ P E +++ + ++ + + + +L
Sbjct: 358 -----KFMYKIRDLLQDIG---DIERLASKLALGRINPKELVSLKRFLVGSLEVVTELAM 409
Query: 550 -HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ + E+V + + L++R IL P V+ ++GD II
Sbjct: 410 NNFEDVNFEEVNDIKIITDLIERAIL--EDPKVV--------------INEGD-----II 448
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKV 666
+ + + +A + + + L ++ G+ NL+ + I + +E+ + V
Sbjct: 449 KDDYDETLKKYNEARREGRSWISELEYNYKQDTGINNLKIRYNNVIGYYVEVTKSNVSSV 508
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P ++ K + + RY + +++ + ANE+ + + + + Y
Sbjct: 509 PSDFIKRQTLIGSERYTTSKLMEYETIINEANEKSYALEYDIFINVRNKTNEYLNSILKM 568
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDT 785
+ ++ +D +LA L++ N+++P+ + I I GRHPV++ L ++F+PNDT
Sbjct: 569 ARVISIIDVYSSLACLAKEDNYIKPII---TDDGIIDIKDGRHPVVEVNLKTESFIPNDT 625
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L + E+ IITGPNM GKS Y+RQ ALI ++AQ+GSFVPASSA++ ++D I+TR+GAS
Sbjct: 626 YLDNKNEHMLIITGPNMSGKSTYLRQTALIVLLAQIGSFVPASSAKISIVDRIFTRVGAS 685
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL--EH 903
D+I +G STFL E+NE +YIL +CT +SLVI+DE+GRGTST+DG++IA+A ++YL+ E+
Sbjct: 686 DNIARGESTFLVEMNETAYILNHCTDKSLVIMDEIGRGTSTYDGLSIAWAIVEYLVHEEN 745
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
KK LF THY ++ ++ + + ++KV+ ++ D+ + ++ KV G
Sbjct: 746 KKAKTLFATHYHELTMLE----------DLEGVKNYKVL--VEEYKDE-IIFMKKVTEGA 792
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++SS+G A++A P I RAT I +LEA+ S +V+N
Sbjct: 793 AKSSYGIYAAKIAGAPNKVIKRATEILKRLEADASVQVEN 832
>gi|389747671|gb|EIM88849.1| DNA mismatch repair protein Msh6 [Stereum hirsutum FP-91666 SS1]
Length = 1195
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 260/953 (27%), Positives = 429/953 (45%), Gaps = 98/953 (10%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K+++P E Q E+K + D +L + G + EDA + + + +P
Sbjct: 258 KEFSPFETQFWEIKQNHYDTVLFFQKGKFLELYEEDARIGHREFDLKLTQRVKMSMVGVP 317
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETA--------AIKAHGPGKAGP--FGRGLSALYTK 196
N + + G+KVG V Q ETA + K+ G AG R L+ +YT
Sbjct: 318 EMSFNFWAAKFLAKGYKVGRVDQVETALGAEMRLASDKSKGKKTAGEKIVRRELNKVYTN 377
Query: 197 ATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
TL E + + G + V + + D + + G G+ ++ +T +
Sbjct: 378 GTLVDEELLTDEQAG------HCVSIRESDPDDFPGASTGSAGGG-GAFGICVLDSATSE 430
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASR- 314
F D R+ LE ++ L E++ + LS +T ++L + PA+ + +
Sbjct: 431 FNLCAFEDDVCRTRLETLMRQLRVKEIVFTKGNLSVETTRLLKSLL-PATCLWTSLRDKK 489
Query: 315 DCFIGGGALAEVMSLY--ENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP----DL- 367
+ F + E+ LY G D+ + NE+ ++ A+EG+ +P D+
Sbjct: 490 EGFDYETTIEELKQLYPPSEAGSDSQTQNEESMIE-------DEAMEGMEGVPKAIRDML 542
Query: 368 ----AVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNS 420
AV++L I +L+Q +++ + +F + + L TL +EVL NN
Sbjct: 543 KCKSAVESLGSMIWYLRQLNIDKDILTMRNFNVYDPMKRGQGLVLDGQTLAHIEVLVNN- 601
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
G+E G+LL ++ +T +G RL R W+ PL + I+ARLDA+ ++ +
Sbjct: 602 EGTEEGSLLELLGRCVTPFGKRLFRIWLCMPLREIKDINARLDAIEDLMRDLS------- 654
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
E QF + + PD++R ++RI + +F+ V+ A
Sbjct: 655 -------------FEEQFVKVAKGL-------PDLERIVSRIHAKNCKVKDFLKVLSAFR 694
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG 600
+ L +L + E SKT+ L L S+P + + S + D
Sbjct: 695 RLSEGLAEL---ADASESFNSKTI-------LGLLRSAPDLEPHIKNVQSKFKRPDKDNT 744
Query: 601 DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT--HLI 658
D L + + + E++ ++ ++EL+ + +KQLG + S G +L+
Sbjct: 745 DELIPVEGKDEAYDEIS---AEIKELEDELEKELKKLKKQLGCDLTYWHSAQGTKEIYLV 801
Query: 659 ELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+ A + +P NW K +TK R+ P + + L A E ++ +EF
Sbjct: 802 QTKAGQEDIPRNWVKSGATKAATRWVVPSLSATIRSLKEARETRNATIKSYKLRLFEEFD 861
Query: 718 GYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
+ A++ LA LDCL +LA S+ + RP FV+ + RHP L
Sbjct: 862 KDRGVWLRAIRVLAELDCLFSLAKSSQAMGEPVCRPEFVETDGEAWVDFVELRHPALAVR 921
Query: 776 LLDNFVPNDTNLHAEREYCQIITGPNM-GGKSCYIRQVALIGIMAQVGSFVPASSAELHV 834
+F+PND L E ++TG + GGKS +R A IMAQ+G +VPA A L
Sbjct: 922 TKGDFIPNDVKLGGEVGRIALLTGELIFGGKSTVMRMTATGVIMAQLGMYVPAQKARLSP 981
Query: 835 LDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAY 894
+D I TRMGA D++ STF EL+E ILR+ T +SLVI+DELGRGTST+DG+AIA
Sbjct: 982 VDSILTRMGAYDNMFSNASTFKVELDECCKILRDATPRSLVILDELGRGTSTYDGMAIAG 1041
Query: 895 ATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVT 954
A L L H + F THY + D F YH + H M M ++ +++
Sbjct: 1042 AVLHQLATHTLALTFFATHYGSLTD---DF-----AYHPNIRNMH--METMVNEEKRELV 1091
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
+LYK++ G++ SSFG VA LA +P + RA V++ + +V + K
Sbjct: 1092 FLYKLIDGIASSSFGTHVANLAGVPLEVVQRAEVVSKDFARQFKEKVDGKRKK 1144
>gi|257066441|ref|YP_003152697.1| DNA mismatch repair protein MutS [Anaerococcus prevotii DSM 20548]
gi|256798321|gb|ACV28976.1| DNA mismatch repair protein MutS [Anaerococcus prevotii DSM 20548]
Length = 868
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 253/967 (26%), Positives = 442/967 (45%), Gaps = 174/967 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------AHLDHNFM 141
K TP+ + V++K + D +L+ VG + F +DA + +K L + H M
Sbjct: 9 KLTPMLKHYVDVKNDFKDAILLYRVGDFYEAFFDDAIITSKALSLTLTGKECGHEKKAPM 68
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
+P ++ + +LV G+KV + Q E P +A G R ++ + T T+
Sbjct: 69 CG-VPHHVIDNYAFKLVKQGYKVALCDQVE-------DPKEAKGLVKRAITRVITPGTIT 120
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E + + +NYL+ + +D +G L + +ISTG +V
Sbjct: 121 DMESLDNRK------NNYLLSIFQND----------YG------LSISYCDISTGKLVSF 158
Query: 261 EFNDGFLRSGLEAV--LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
E G +A+ + ++P+E+L+ + Q N+R + F+
Sbjct: 159 EIKGLSSSIGKKAIDQIEKINPSEILINSDFNDQ-------------NLRRYFLDEEIFV 205
Query: 319 G-----GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA 373
+ + +++G+D L E N R +I + N+ D +
Sbjct: 206 NYIQNPKDYMNRASLIRDHLGDDNLKKIE----------NMRLSILSLANLLDYIYKYHK 255
Query: 374 LTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
+ H+ + L + M L A+T + LE+ +N +N ++ +LL I++
Sbjct: 256 DNLVHINNIDI------------LEINDYMELEASTRKNLELSKNLNNNTKENSLLSIID 303
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T+ GSR++ ++ PL D+ I RLD I E + + R I
Sbjct: 304 KADTVMGSRMISEYLERPLIDKRKIERRLD----IVEVLFNDR----------------I 343
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ +LS V D++R I +I ++ A +FI++ +I K
Sbjct: 344 LASNISNLLSDVY-------DLERLIAKISYKRANGRDFISLKNSIANIPK--------- 387
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM------- 606
LK ++ + S + S + + D D+ +L+
Sbjct: 388 ---------------LKDILRSYSDTNI--------SNIGENIPDVSDIFDLIDKAIVED 424
Query: 607 ---------IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL 657
II + E+ + +++ SA+ L N R++ G++N + + +
Sbjct: 425 PPIAISEGGIIKDSYNDELDKLKESSSSAQSALIEYENKEREKTGIKNYKIVFNKNNGYS 484
Query: 658 IEL-PANF-KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE-LTIVCRAAWDSFLK 714
IE+ +N KVP ++ + + K RY + E L + L L ++ + + + +
Sbjct: 485 IEITKSNLDKVPDSYVRKQTLKNQERY-TTEKLEEISSLILGGKDRINDLEYKIFQEIRE 543
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
+ + QA + LA +D L+ A +S ++VRPV +D+ I I GRHPV++
Sbjct: 544 KVLKNTIKLQALAKILATVDTLNTFAKISLENSYVRPVIREDN---IIKIKDGRHPVIER 600
Query: 775 ILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
L +N F+PNDT++ E QIITGPNM GKS Y+RQ+A+I I+AQ+G FVPAS AE+
Sbjct: 601 KLKENEFIPNDTDIGEENNLIQIITGPNMAGKSTYMRQMAIIIILAQMGCFVPASLAEIS 660
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
+ D ++TR+GASD+I +G STF+ E+NE S IL+N T S VI+DE+GRGTS+ DG++IA
Sbjct: 661 ICDQVFTRIGASDNISKGESTFMLEMNEVSSILKNSTEHSFVILDEVGRGTSSDDGLSIA 720
Query: 894 YATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDV 953
A ++YL + KK +F TH+ ++ I K +V + L + + ++
Sbjct: 721 MAIVEYLSKRKKVKTVFATHFHELT-ILEKELDNVKNLKIEIL-----------EENNNL 768
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVK 1013
+L K+ G S+ S+G +VA+L+ LP I A +I KL + + + L +
Sbjct: 769 VFLRKISEGKSDRSYGIEVAKLSGLPNEIIDNAKIIMDKLSTDDFYDLDKKKEISTSLEE 828
Query: 1014 LSDQEQE 1020
+SDQ+ E
Sbjct: 829 ISDQKLE 835
>gi|1817725|gb|AAC53034.1| G/T-mismatch binding protein [Mus musculus]
Length = 1358
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 272/1010 (26%), Positives = 436/1010 (43%), Gaps = 146/1010 (14%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P+ +P TL +P + TP ++ +LK++ D+++ +VG + +
Sbjct: 383 RRPDHPEFNPTTLY-VPEEFLNSC-----TPGMRKWWQLKSQNFDLVIFYKVGKFYELYH 436
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK---- 176
DA + LG+ + N+ + P LV G+KV V+QTET +
Sbjct: 437 MDAVIGVSELGLI-FMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARC 495
Query: 177 ---AHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
AH R + + TK T + G D S YL+ + + +
Sbjct: 496 RKMAHVSKFDRVVRREICRIITKGTQTYSVLDG---DPSENYSRYLLSLKEKEEETS--- 549
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
G GV V+ S G G+F+D S ++ P ++L + LS +
Sbjct: 550 ------GHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILFEKGNLSTE 603
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
T+ +L G S+ C G +L + + N D + +P
Sbjct: 604 TKTVL---KGSLSS----CLQEGLIPGSQFWDATKTLRTLLEGGYFTGNGDSSTVLP--- 653
Query: 353 NHRSAIEGIMNMPD-----------LAVQALALTIRHLKQFGLERIMCLGASFRSL---- 397
++G+ + D LA+ AL + +LK+ +++ + A+F
Sbjct: 654 ---LVLKGMTSESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLD 710
Query: 398 --------------SGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
S M L A TL LE+ N +NGS G LL ++ T +G RL
Sbjct: 711 SDTVSTVKPGAVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGNLLERLDTCHTPFGKRL 770
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
L++W+ PLC + IS RLDAV ++ + P Y ++
Sbjct: 771 LKQWLCAPLCSPSAISDRLDAVEDL------------------------MAVP---YKVT 803
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATP--SEFIAVMQAILYAGKQLQQLHI-------DG- 553
V L + PD++R +++I H +P S+ +AI+Y + I +G
Sbjct: 804 EVADLLKKLPDLERLLSKI-HNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGF 862
Query: 554 -----------EYREKVTSKTLHSAL-LKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
E TSKTL + L+ P + + + + + E A +
Sbjct: 863 KVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTG 922
Query: 602 LLNLMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL 660
L+ + + + +A R+ QS E LD R +LG +++ + + + +E+
Sbjct: 923 LITPKAGFDSDYDQALADIRENEQSLLEYLDKQ----RSRLGCKSIVYWGIGRNRYQLEI 978
Query: 661 PANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
P NF +P + ++ K RY + + L L A E + F
Sbjct: 979 PENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFCNFD 1038
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVFV---DDHEPVQIHICSGRHPVL 772
+ ++Q+AV+ +A LD L LA S+ + RP V +D P + RHP +
Sbjct: 1039 KNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPGEDTHPF-LEFKGSRHPCI 1097
Query: 773 -DTILLDNFVPNDTNLHAERE-------YCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
T D+F+PND + E E YC ++TGPNMGGKS IRQ L+ +MAQ+G +
Sbjct: 1098 TKTFFGDDFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVMAQLGCY 1157
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA L +D ++TR+GASD I G STF EL+E + ILR+ TA SLV+VDELGRGT
Sbjct: 1158 VPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDELGRGT 1217
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
+T DG AIA A + L E KC LF THY + + +K + V H++ + ++ P
Sbjct: 1218 ATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYSK-SVCVRLGHMACMVENECEDP 1276
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
S + +T+LYK + G S+GF A+LA LP I + A + E
Sbjct: 1277 ----SQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFE 1322
>gi|298207616|ref|YP_003715795.1| DNA mismatch repair protein MutS [Croceibacter atlanticus HTCC2559]
gi|83850252|gb|EAP88120.1| putative DNA mismatch repair protein MutS [Croceibacter atlanticus
HTCC2559]
Length = 869
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 266/952 (27%), Positives = 435/952 (45%), Gaps = 148/952 (15%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMT 142
KK TPL QQ +KTKYPD LL+ VG + FGEDA AA++L I +N
Sbjct: 5 KKVTPLMQQYNSIKTKYPDALLLFRVGDFYETFGEDAVKAARILNIVLTNRNNGGERTEL 64
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A P LN ++ +LV AG +V + Q E RG++ L T A
Sbjct: 65 AGFPHHSLNTYLPKLVKAGERVAICDQLEDPK------ATKSIVKRGVTELVTPGV--AL 116
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
D E +N+L V +GK ++GV +++STG+ + +
Sbjct: 117 ND----EVLQSNSNNFLASVY-----IGK-----------KQMGVAFLDVSTGEFLTAQG 156
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+ ++ + +L + +P+E+L+ +KQ + A G S+ F A
Sbjct: 157 SSEYI----DKLLQNFAPSEILI----AKQKKADFTAIFG--SDFHTFYIEDWVFKTDYA 206
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD--LAVQALALTIRHLK 380
+L+++ G +L G+ ++ D +A A+ + +
Sbjct: 207 HE---TLHQHFGVKSLKGF------------------GVDHLEDGIIASGAILYYLSETQ 245
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
L+ I S ++ + + T++ LE+ + S S TLL +++ T + G
Sbjct: 246 HHKLKHI----TSISRIAEDAYVWMDRFTIRNLELYQGTSLQS--VTLLDVIDKTTSPMG 299
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R L+RW+ PL + I R V+ +
Sbjct: 300 GRTLKRWLALPLKNAEKIKKRHRVVNYFLKQKT--------------------------- 332
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE-KV 559
+LS V + + + DI+R I+++ +P E I + + L A ++ L + E KV
Sbjct: 333 LLSDVTSHIKQIGDIERLISKVATAKVSPREVIQLKNS-LDAIVPIKTLALKSENDALKV 391
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
L S L R K+ T+N+EA ++L I+ G E+
Sbjct: 392 IGDNLQSCDLLR--------------GKITETLNEEAP--VNILKGSTIARGFSKELDEL 435
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTK 677
R S KE LD ++ + G+ +L+ S + + IE+ + K VP NW + +
Sbjct: 436 RDIRFSGKEYLDKMLQRETEATGITSLKIASNNVFGYYIEVRNSHKDKVPENWVRKQTLV 495
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
RY + E+ ++ A E++ + + + + Y Q + +DCL
Sbjct: 496 NAERYITEELKEYEAKILGAEEKIVQIEQELFSKLVTWISDYIKPVQQNAHLIGEIDCLC 555
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQ 795
AT + +N+ P +D+ + I GRHPV++ L + ++ ND L+ + +
Sbjct: 556 GFATQAMQENYCLPEITEDY---SLEITEGRHPVIEKQLPLGEPYITNDILLNRDDQQMI 612
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNM GKS +RQ ALI ++AQ+GSFVPA +A++ ++D I+TR+GASD+I G STF
Sbjct: 613 MITGPNMSGKSAILRQTALIVLLAQMGSFVPAKAAKIGLVDKIFTRVGASDNISMGESTF 672
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLFVTHY 914
+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL EH K LF THY
Sbjct: 673 MVEMNETASILNNLSDRSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPAKAKTLFATHY 732
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ ++ F + Y+VS + +V +L K+VPG SE SFG VA+
Sbjct: 733 HELNEMTETFE-RIKNYNVSV-----------KELKDNVLFLRKLVPGGSEHSFGIHVAK 780
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMP 1026
+A +P + RA I KLE SS +LS Q ++A E P
Sbjct: 781 MAGMPQQVLHRANKILKKLEKSHSSE------------ELSGQIKKATEQEP 820
>gi|291546135|emb|CBL19243.1| DNA mismatch repair protein MutS [Ruminococcus sp. SR1/5]
Length = 872
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 258/953 (27%), Positives = 440/953 (46%), Gaps = 179/953 (18%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTASIPTF 148
++ V+ K +Y D +L +G + F +DA A+K L I L+ +P
Sbjct: 3 KEYVKTKEEYSDCILFYRLGDFYEMFFDDALTASKELEITLTGKDCGLEERAPMCGVPFH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDVGG 207
++ RL+ G+KV + +Q E P KA G R + + T T + +
Sbjct: 63 AAETYINRLIEKGYKVAICEQVE-------DPKKAKGLVKREVVRIVTPGT--TLDTMSL 113
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
E ++NYL+ +V G+ F G +I+TGD E +
Sbjct: 114 DE----SKNNYLMSIVS------------IGEHF----GCAIADITTGDCFLTELD---- 149
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
P +LL ++K T PA E D F+ G +V
Sbjct: 150 -----------KPQKLL--DEINKFT---------PA-----EIICNDAFLLSGV--DVA 180
Query: 328 SLYENMG-----EDTLSNNEDQNMDVPEQGNHRSAIEGI----MNMPDLAVQALALTIRH 378
L +G D ++ ++ H +EG+ + +A AL L ++
Sbjct: 181 DLKGRLGICVFALDPWYFDDQLCQKTLKEHFHVGNLEGLGIGDYDSGIIASGALFLYLKE 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
++ L + AS R S M + +++ + LE++ + G+LL +++ T T
Sbjct: 241 TQKTALSHM----ASIRPYSAEKYMLIDSSSRRNLELVETMREKQKRGSLLWVLDKTKTA 296
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEI-AESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G+R LR +V PL D I RL A+ E+ A+ M E + P
Sbjct: 297 MGARTLRSYVEQPLIDAEEIEKRLGALEELNAKPMDRDEIREYLN-------------PI 343
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+ D++R I+RI +++A P + ++ + L+ L
Sbjct: 344 Y---------------DLERLISRISYKSANPRDLVSFASS-------LEML-------- 373
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM----------- 606
+K+++ SP LL +N++ D+ +L+
Sbjct: 374 ---------PYIKQILAEFKSP--------LLMQINEDMDPLSDITDLIRNSIADDPPLA 416
Query: 607 -----IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
II G +V + R++ K+ L L R++ G+++L+ + +E+
Sbjct: 417 QKDGGIIREGYNEDVDKFRRSRTDGKKWLSELEARERERTGIKSLKIKYNRVFGYSLEVT 476
Query: 662 ANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
FK VP ++ + + RY + E+ D + A ++L + + + G
Sbjct: 477 NTFKDLVPEDYIRKQTLTNAERYITQELKDLEDLILGAEDKLYALEFELFSDIRDQVGAE 536
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-D 778
Q +A+AALD +LA +++ NFVRP +E I I +GRHPV++ ++ D
Sbjct: 537 VVRIQRTAKAVAALDVFASLALVAQRNNFVRPKI---NETGLIDIRNGRHPVVEQMIEND 593
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
F+PNDT L ++ IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA SA + V+D I
Sbjct: 594 MFIPNDTYLDNHKKRISIITGPNMAGKSTYMRQTALIVLMAQIGSFVPADSANIGVVDRI 653
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TR+GASD + G+STF+ E+ E + ILRN T++SL+I+DE+GRGTST DG++IA+A ++
Sbjct: 654 FTRVGASDDLASGQSTFMVEMTEVANILRNATSRSLLILDEIGRGTSTFDGLSIAWAVIE 713
Query: 899 YLLEHKKC--MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
++ K C LF THY ++ +++ K +G V Y ++ + K D D+ +L
Sbjct: 714 HISNTKLCGAKTLFATHYHELTELEGKLSG-VNNYCIA----------VKEKGD-DIVFL 761
Query: 957 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQNRSAKR 1008
K+V G ++ S+G +VA+LA +P S I RA + +L +A++++ V++ +A +
Sbjct: 762 RKIVKGGADKSYGIQVAKLAGVPDSVIQRAKELVEELSDADITAAVKDLTAPK 814
>gi|293347880|ref|XP_002726765.1| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus norvegicus]
gi|149050458|gb|EDM02631.1| rCG61559 [Rattus norvegicus]
Length = 1361
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 263/974 (27%), Positives = 434/974 (44%), Gaps = 126/974 (12%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP ++ + K++ D+++ +VG + + DA + LG+ + N+ + P
Sbjct: 409 TPGMRRWWQFKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLI-FMKGNWAHSGFPEIA 467
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIK-------AHGPGKAGPFGRGLSALYTKATLEAA 202
LV G+KV V+QTET + AH R + + TK T +
Sbjct: 468 FGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTYS 527
Query: 203 EDVGGGEDGCGGESNYLVCVVD-DDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
G D S YL+ + + ++ + G +R GV V+ S G G+
Sbjct: 528 VLDG---DPSENYSRYLLSLKEKEEDSSGHMRA----------YGVCFVDTSLGKFFLGQ 574
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
F+D S L ++ P ++L + LS +T+ +L G S+ C G
Sbjct: 575 FSDDRHCSRLRTLVAHYPPVQILFEKGNLSTETKTVL---KGSLSS----CLQEGLIPGS 627
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVP---EQGNHRSAIEGIM--NMPDLAVQALALT 375
+L + + NE ++P + S G+ +L++ AL
Sbjct: 628 QFWDATKTLRTLLEGGYFTGNEGSGAELPPVLKAMTSESDSVGLTPGEESELSLSALGGC 687
Query: 376 IRHLKQFGLERIMCLGASFRSL------------------SGSMEMTLSANTLQQLEVLR 417
+ +LK+ +++ + A+F S M L A TL LE+
Sbjct: 688 VFYLKKCLIDQELLSMANFEEYFPLDSDMVGTVKPGAVFTKASQRMVLDAVTLSNLEIFL 747
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N +NGS GTLL ++ T +G RLL++W+ PLC + IS RLDA+ ++
Sbjct: 748 NGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAIEDL--------- 798
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP--SEFIAV 535
+ P ++ +L L PD++R +++I H +P S+
Sbjct: 799 ---------------MAVPDKVAEVADLLKKL---PDLERLLSKI-HNVGSPLKSQNHPD 839
Query: 536 MQAILYAGKQLQQLHI-------DG-EYREKVT------SKTLHSALLKRLI-LTASSPA 580
+AI+Y + I +G + K+T + S LK+++ L SP
Sbjct: 840 TRAIMYEETTYSKKKIIDFLSALEGFKVMCKITRLMEDVADGFKSKTLKQVVTLQTKSPK 899
Query: 581 VIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
G+ L + +N+ ++ L+ G S+ +A ++ ++ L ++
Sbjct: 900 --GRFPDLTAELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDK 957
Query: 637 CRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQ 693
R ++G RN+ + + + +E+P NF +P + ++ K RY + + L
Sbjct: 958 QRSRIGCRNIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKVIEKKLSN 1017
Query: 694 LALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN--FVRP 751
L A E + F + ++Q+AV+ A LD L LA+ S+ + RP
Sbjct: 1018 LINAEERRDASLKDCMRRLFYNFDKNHKDWQSAVECTAVLDVLLCLASYSQGGDGPMCRP 1077
Query: 752 VFV---DDHEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAERE-------YCQIITGP 800
V + +D P + + RHP + T D+F+PND + E + YC ++TGP
Sbjct: 1078 VLLLPGEDTHPF-LELKGSRHPCITKTFFGDDFIPNDILIGCEEDAEADGKAYCVLVTGP 1136
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS IRQ L+ +MAQ+G +VPA L +D ++TR+GASD I G STF EL+
Sbjct: 1137 NMGGKSTLIRQAGLLAVMAQMGCYVPAELCRLTPVDRVFTRLGASDRIMSGESTFFVELS 1196
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
E + ILR+ TA SLV+VDELGRGT+T DG AIA A + L E KC LF THY + +
Sbjct: 1197 ETASILRHATAHSLVLVDELGRGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVED 1256
Query: 921 KTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPP 980
+K V H++ + ++ P S + +T+LYK + G S+GF A+LA LP
Sbjct: 1257 YSKNV-CVRLGHMACMVENECEDP----SQETITFLYKFIKGACPKSYGFNAARLANLPE 1311
Query: 981 SCISRATVIAAKLE 994
I + A + E
Sbjct: 1312 EVIQKGHRKAREFE 1325
>gi|298242775|ref|ZP_06966582.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM 44963]
gi|297555829|gb|EFH89693.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM 44963]
Length = 936
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 259/966 (26%), Positives = 439/966 (45%), Gaps = 146/966 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNF------MTA 143
+P+ Q + +K + PD +L +G + F +DAE+ A+ L I A +F A
Sbjct: 22 SPVRAQYLNIKRQNPDAILFFRMGDFYEMFDDDAEIVARELEI-ALTRRDFGRGQKSPMA 80
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
IP + ++ RLV G++V + +Q A+ G R + + T T+
Sbjct: 81 GIPHHAADGYIARLVGKGYRVAICEQVSDPALSK------GLVEREVVRIVTPGTIIDPS 134
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + N+L VV G +G + ++I+TG+ +F
Sbjct: 135 MLAAKRN------NFLAAVVPGRGAIG----------------IAYIDITTGEFAVTQFA 172
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSK--QTEKMLLAYA---------GPASNVRVEC- 311
++ + +SPAE+L+ S+ +K LA G N E
Sbjct: 173 TPEPELAIQQEISRVSPAEVLVEAHYSRLGNRKKRWLATVMSEKQVTKLGSNGNANAEIP 232
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR-------SAIEGI--M 362
A ++ L + D + HR S++EG
Sbjct: 233 DLEAEEDEEEDYAPLVKLLSGLAGHVTPY--DSRYFAEDDARHRLLKQFEVSSLEGFGCA 290
Query: 363 NMPDLAVQALALTIRHLK--QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNS 420
++P LAV+A + +++ Q GL + + + + S + MTL T + LE+
Sbjct: 291 HLP-LAVRAAGAVLSYVQETQKGLLQHLI---ALETYSTNNFMTLDPYTRRNLELFETGR 346
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI-AESMGSYRTSE 479
S G+LL +++ T + G RLLRRW+ PL D + R +SE+ +++ R E
Sbjct: 347 LNSVKGSLLWVLDKTHSPMGGRLLRRWIGQPLLDIPTLQLRQQTISELLTDTLLQARLGE 406
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI 539
+ L R+ D++R I R+ R A P + +A+
Sbjct: 407 A----------------------------LKRAGDLERLINRVRQRIANPRDLVALATG- 437
Query: 540 LYAGKQLQQLHIDGEYREKVTSKTLHSA--LLKRLILTASSPAVIGKAAKLLSTVNKEAA 597
LH E R + +A L++ + A + +I K + +
Sbjct: 438 ---------LHAAAEVRTCLDETASENAPSLVRLVDRLAENDDIIELIEKAIIEEPPVSI 488
Query: 598 DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL 657
++G II G +E+ + ++A Q+ ++ + L RK+ G+ NL +
Sbjct: 489 NEGG-----IIRAGFSAELDKLKEASQNGRQWITELEQRERKRTGISNLRVGFNKAYGYF 543
Query: 658 IELP-ANF-KVPLNWAKVNSTKKTIRYHSPE-------VLTALDQLALANEELTIVCRAA 708
IE+ AN + P + + + + RY +P+ +L A D++ E R+
Sbjct: 544 IEITNANLNRAPTEYIRRQTLTNSERYITPDLKEYETLILNAQDRINKMENEFFTQLRS- 602
Query: 709 WDSFLKEFGGYYAE-FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSG 767
+ + AE A+A +D +LA ++ ++ RP +D IHI +G
Sbjct: 603 ------DIAIHAAERILDTAHAIAEIDVFLSLAEVAAKSDYCRPQLNEDD---TIHIVAG 653
Query: 768 RHPVLDTILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
RHPV++ D F+PNDT++ IITGPNM GKS Y+RQVALI +MAQ+GS+VP
Sbjct: 654 RHPVVEQAQTDTPFIPNDTDISNHEAQIAIITGPNMAGKSTYLRQVALITLMAQIGSYVP 713
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
A SA + ++D I+TR+GA D + G+STF+ E+ E + IL + T +SL+I+DE+GRGTST
Sbjct: 714 AESATIGIVDRIFTRIGAQDDLATGQSTFMVEMVETANILHHATPRSLLILDEIGRGTST 773
Query: 887 HDGVAIAYATLDYLLEHKKC--MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
+DG+AIA A ++YL +K+C F THY ++ ++ +K + +V+
Sbjct: 774 YDGLAIARAIVEYLHNNKRCGARTFFATHYHELVEV-SKLLPRIRCLNVAV--------- 823
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNR 1004
++ D V +L K+VPG ++ S+G VAQLA +P + RA I A+LE + ++ + R
Sbjct: 824 --AEEDGKVIFLRKIVPGGADRSYGIHVAQLAGIPRPVLHRAEEILAELERQGDAKAR-R 880
Query: 1005 SAKRDL 1010
A RD+
Sbjct: 881 KAMRDM 886
>gi|288800639|ref|ZP_06406096.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332100|gb|EFC70581.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 299 str.
F0039]
Length = 873
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 266/1006 (26%), Positives = 474/1006 (47%), Gaps = 151/1006 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASI 145
+K TP+ +Q K ++PD +L+ G + + +DA A+K+LGI +N ++++
Sbjct: 5 DKGLTPMMKQFFTFKHQHPDAILLFRCGDFYETYSQDAVEASKILGITLTKRNNGGSSAV 64
Query: 146 ------PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
P L+ ++ +LV AG +V + Q E + RG++ L T +
Sbjct: 65 TEMAGFPHHALDTYLPKLVRAGRRVAICDQLEDPKLTKK------LVKRGITELVTPG-V 117
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
A++V + E+N+L + + GK G+ ++ISTG+ +
Sbjct: 118 ALADNVLNYK-----ENNFLAAI-----HFGK-----------ASCGIAFLDISTGEFLT 156
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASR-DCFI 318
GE + +E +L++ SP E+L + +Q + Y G C D ++
Sbjct: 157 GEGS----YDTIEKLLVNFSPKEVLFDRDNKQQFNQ----YFGDKY-----CTFELDDWV 203
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
+ A L ++ G TL + + N A IM ++ I H
Sbjct: 204 FTESTAR-QKLLKHFGTQTL-----KGFGIDHLTNGIIASGAIMQYLEITQHT---NINH 254
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
+ S + + L T++ LE++ + G +LL++++ T+T
Sbjct: 255 I------------TSISRIEEDRYVRLDKFTIRSLELINSMHEGG--SSLLNVIDSTITP 300
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
GSR+L+RW+ PL ++ I RL+ V I S F
Sbjct: 301 MGSRMLKRWLVFPLKEQKAIEQRLNVVEHIYNS------------------------EDF 336
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
+LS L +G D++R I+R+ +P E + + YA ++ +
Sbjct: 337 EQVLSDQLHRIG---DLERIISRVAVGRVSPREVVQLR----YALDAIEPIKAAC----- 384
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
V SK + I S + + AK +++ + ++G +I++G E+
Sbjct: 385 VASKNESLVRMGEQITLCES--IRARIAKEITSDPPQLVNKGG-----VIADGVNPELDE 437
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNST 676
R S K+ L + +Q G+ +L+ + +V G + KVP W + +
Sbjct: 438 LRAISHSGKDYLLHIQEREVEQTGISSLKIGYNNVFGYYLEVRNMHKDKVPQEWVRKQTL 497
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
+ RY + E+ +++ A +++ + ++ + + + Q +A +DCL
Sbjct: 498 AQAERYITQELKEYEEKILGAEDKILALEAQIFNDLIAALQEFIPQIQINANIIARIDCL 557
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYC 794
H+ A+++++ ++VRP +++ E + I +GRHPV++ L + +VPND L +E++
Sbjct: 558 HSFASVAQSNHYVRPE-INNTEVLDIK--AGRHPVIEMQLPIGERYVPNDILLDSEKQQI 614
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNM GKS +RQ ALI ++AQVGSFVPA SA + V+D I+TR+GASD+I G ST
Sbjct: 615 MMITGPNMAGKSALLRQTALIVLLAQVGSFVPAHSASIGVVDKIFTRVGASDNISVGEST 674
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVT 912
F+ E+ EA+ IL N +++SL++ DELGRGTST+DG++IA+A ++YL E K LF T
Sbjct: 675 FMVEMTEAANILNNVSSRSLILFDELGRGTSTYDGISIAWAIVEYLHEQPKARARTLFAT 734
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ +++ +F + ++VS +++ V ++ K+V G SE SFG V
Sbjct: 735 HYHELNEMEKRFE-RIKNFNVSV-----------KEANGKVMFMRKLVEGGSEHSFGIHV 782
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESF 1032
A +A +P S + RA VI +LE + Q ++ + KL E EN+ + SF
Sbjct: 783 ADIAGMPKSIVKRANVILKQLE---KNNDQVGEVSKNAINKLD----EPNENVQL---SF 832
Query: 1033 YLGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSIAK 1078
+ + + ++ RD FLNL ++ P ++ L + I K
Sbjct: 833 F----KLDDPVLIQIRDEFLNLDI--NNLTPVEALNKLNDIKKIIK 872
>gi|26353224|dbj|BAC40242.1| unnamed protein product [Mus musculus]
Length = 1358
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 272/1010 (26%), Positives = 436/1010 (43%), Gaps = 146/1010 (14%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P+ +P TL +P + TP ++ +LK++ D+++ +VG + +
Sbjct: 383 RRPDHPEFNPTTLY-VPEEFLNSC-----TPGMRKWWQLKSQNFDLVIFYKVGKFYELYH 436
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK---- 176
DA + LG+ + N+ + P LV G+KV V+QTET +
Sbjct: 437 MDAVIGVSELGLI-FMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARC 495
Query: 177 ---AHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
AH R + + TK T + G D S YL+ + + +
Sbjct: 496 RKMAHVSKFDRVVRREICRIITKGTQTYSVLDG---DPSENYSRYLLSLKEKEEETS--- 549
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
G GV V+ S G G+F+D S ++ P ++L + LS +
Sbjct: 550 ------GHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILFEKGNLSTE 603
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
T+ +L G S+ C G +L + + N D + +P
Sbjct: 604 TKTVL---KGSLSS----CLQEGLIPGSQFWDATKTLRTLLEGGYFTGNGDSSTVLP--- 653
Query: 353 NHRSAIEGIMNMPD-----------LAVQALALTIRHLKQFGLERIMCLGASFRSL---- 397
++G+ + D LA+ AL + +LK+ +++ + A+F
Sbjct: 654 ---LVLKGMTSESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLD 710
Query: 398 --------------SGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
S M L A TL LE+ N +NGS GTLL ++ T +G RL
Sbjct: 711 SDTVSTVKPGAVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRL 770
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
L++W+ PLC + IS RLDAV ++ + P ++
Sbjct: 771 LKQWLCAPLCSPSAISDRLDAVEDL------------------------MAVPDKVTEVA 806
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATP--SEFIAVMQAILYAGKQLQQLHI-------DG- 553
+L L PD++R +++I H +P S+ +AI+Y + I +G
Sbjct: 807 DLLKKL---PDLERLLSKI-HNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGF 862
Query: 554 -----------EYREKVTSKTLHSAL-LKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
E TSKTL + L+ P + + + + + E A +
Sbjct: 863 KVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTG 922
Query: 602 LLNLMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL 660
L+ + + + +A R+ QS E LD R +LG +++ + + + +E+
Sbjct: 923 LITPKAGFDSDYDQALADIRENEQSLLEYLDKQ----RSRLGCKSIVYWGIGRNRYQLEI 978
Query: 661 PANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
P NF +P + ++ K RY + + L L A E + F
Sbjct: 979 PENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFCNFD 1038
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVFV---DDHEPVQIHICSGRHPVL 772
+ ++Q+AV+ +A LD L LA S+ + RP V +D P + RHP +
Sbjct: 1039 KNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPGEDTHPF-LEFKGSRHPCI 1097
Query: 773 -DTILLDNFVPNDTNLHAERE-------YCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
T D+F+PND + E E YC ++TGPNMGGKS IRQ L+ +MAQ+G +
Sbjct: 1098 TKTFFGDDFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVMAQLGCY 1157
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA L +D ++TR+GASD I G STF EL+E + ILR+ TA SLV+VDELGRGT
Sbjct: 1158 VPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDELGRGT 1217
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
+T DG AIA A + L E KC LF THY + + +K + V H++ + ++ P
Sbjct: 1218 ATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSK-SVCVRLGHMACMVENECEDP 1276
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
S + +T+LYK + G S+GF A+LA LP I + A + E
Sbjct: 1277 ----SQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFE 1322
>gi|258511466|ref|YP_003184900.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478192|gb|ACV58511.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 867
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 284/1010 (28%), Positives = 442/1010 (43%), Gaps = 170/1010 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q E+K+K D LLM +G + F EDA +A++ L I A
Sbjct: 4 TPMMRQYREIKSKLDDTLLMFRLGDFYELFFEDAVIASQALDITLTGRDAGEAGRVPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P L+ ++ RL+ GF+V + Q E P A G R + + T T E
Sbjct: 64 VPHHALDGYLERLIEQGFRVAICDQVED-------PKAAKGLVRREIVRIVTPGTAVTEE 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
++ YL + GD +G+ V++ GDV +G +
Sbjct: 117 ----------SDARYLAAL------------AFQGD----EVGLALVDVGAGDVWFGAGS 150
Query: 264 DGFLRSGLEAVLLSLSPAELLL--GQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG-- 319
+R + P E+LL Q E++L + A RV S D F+
Sbjct: 151 AEDMRDHVA----RFRPREILLEGAQAFPGWLEEILNRHG--AIVTRVPAPSGDAFLMHY 204
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
G + E + L G LS NM G + D + AL RHL
Sbjct: 205 GASSPEALGL--RPGSAALSAC---NM-------------GFQYLRDTQMAAL----RHL 242
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
A R L M LS T++ LE++ S +L ++ T+T
Sbjct: 243 ------------APPRPLLEPGRMWLSERTVEHLELVPMGSGRERRTSLYDVIRETVTAA 290
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ PL DR I RLDAV+ +A+ +
Sbjct: 291 GSRLLRTWMLRPLVDRGAIEERLDAVTALADDL--------------------------- 323
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
+ + + SL D+ R + + ATP + +A+ AI + L DG
Sbjct: 324 LLRAEIRESLKGMHDLSRLLAKCSIGRATPRDLLALAHAIEKGEAAIALLPADG------ 377
Query: 560 TSKTLHSALLKRLI--LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
AL RL L P A +L+ AA+ G I +G +E+
Sbjct: 378 ------PALFSRLTRDLPDFRPLAEHIARELVDDPPASAAEGG------IFRDGVDAEID 425
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNS 675
R R + L R++ G+++L+ + IE+ AN VP ++ + +
Sbjct: 426 RLRSLQSEGRSWLREFEARERERTGIKSLKIGYNKVFGYYIEVSKANLSLVPADYERKQT 485
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
R+ PE+ + A E + + RA ++S++ +E Q + ++ +D
Sbjct: 486 LAAGERFTHPELKAREADMLTAAERVVELERARFESWIHRVREQASELQRFAEVVSTIDV 545
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
L LA L+ + +VRP DD V I I GRHPV++ L FVPND L +
Sbjct: 546 LAGLAELAVKRGYVRPEVTDD---VGIEIREGRHPVVEASLGSEFVPNDLVLTPDAPII- 601
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
++TGPNMGGKS Y+RQ ALI I+AQ+GS+VPA SA + ++D ++TR+GASD + +G+STF
Sbjct: 602 LLTGPNMGGKSTYMRQAALIAILAQMGSYVPARSARIGLVDRVFTRIGASDDLSRGQSTF 661
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVTHY 914
+ E+ E + ILR + +SLV++DE+GRGTST+DG++IA A L+ L E + + + LF THY
Sbjct: 662 MVEMTELAEILREASGRSLVLLDEIGRGTSTYDGLSIAEAVLEDLAERRDRPLTLFATHY 721
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ +F+ ++ M ++D + +L+ VV S+ S+G +VA+
Sbjct: 722 HELISFSERFS----------CVRNQSMAV--EETDTGIRFLHTVVMRPSDRSYGIQVAR 769
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYL 1034
LA LP I RA EA+ + + QE +A+E PV+ + F
Sbjct: 770 LAGLPDRVIRRAMEFLEAREAKPEVAAARDDRR-----ERRRQEGQAREGGPVALDLF-- 822
Query: 1035 GRVEASEDLISAYRDLFLNLKFATHD---DNPAKSFQFLKHARSIAKELI 1081
+ YRDL L A D P ++ Q L A A++L+
Sbjct: 823 ---------AAPYRDLVDWL--AAQDVMRMTPLEAMQVLHEAAEKARDLV 861
>gi|6754744|ref|NP_034960.1| DNA mismatch repair protein Msh6 [Mus musculus]
gi|341940990|sp|P54276.3|MSH6_MOUSE RecName: Full=DNA mismatch repair protein Msh6; AltName: Full=G/T
mismatch-binding protein; Short=GTBP; Short=GTMBP;
AltName: Full=MutS-alpha 160 kDa subunit; AltName:
Full=p160
gi|2665637|gb|AAB88445.1| mismatch repair protein MSH6 [Mus musculus]
gi|30109297|gb|AAH51160.1| MutS homolog 6 (E. coli) [Mus musculus]
gi|30185718|gb|AAH51634.1| MutS homolog 6 (E. coli) [Mus musculus]
Length = 1358
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 272/1010 (26%), Positives = 436/1010 (43%), Gaps = 146/1010 (14%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P+ +P TL +P + TP ++ +LK++ D+++ +VG + +
Sbjct: 383 RRPDHPEFNPTTLY-VPEEFLNSC-----TPGMRKWWQLKSQNFDLVIFYKVGKFYELYH 436
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK---- 176
DA + LG+ + N+ + P LV G+KV V+QTET +
Sbjct: 437 MDAVIGVSELGLI-FMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARC 495
Query: 177 ---AHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
AH R + + TK T + G D S YL+ + + +
Sbjct: 496 RKMAHVSKFDRVVRREICRIITKGTQTYSVLDG---DPSENYSRYLLSLKEKEEETS--- 549
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
G GV V+ S G G+F+D S ++ P ++L + LS +
Sbjct: 550 ------GHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILFEKGNLSTE 603
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
T+ +L G S+ C G +L + + N D + +P
Sbjct: 604 TKTVL---KGSLSS----CLQEGLIPGSQFWDATKTLRTLLEGGYFTGNGDSSTVLP--- 653
Query: 353 NHRSAIEGIMNMPD-----------LAVQALALTIRHLKQFGLERIMCLGASFRSL---- 397
++G+ + D LA+ AL + +LK+ +++ + A+F
Sbjct: 654 ---LVLKGMTSESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLD 710
Query: 398 --------------SGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
S M L A TL LE+ N +NGS GTLL ++ T +G RL
Sbjct: 711 SDTVSTVKPGAVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRL 770
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
L++W+ PLC + IS RLDAV ++ + P ++
Sbjct: 771 LKQWLCAPLCSPSAISDRLDAVEDL------------------------MAVPDKVTEVA 806
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATP--SEFIAVMQAILYAGKQLQQLHI-------DG- 553
+L L PD++R +++I H +P S+ +AI+Y + I +G
Sbjct: 807 DLLKKL---PDLERLLSKI-HNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGF 862
Query: 554 -----------EYREKVTSKTLHSAL-LKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
E TSKTL + L+ P + + + + + E A +
Sbjct: 863 KVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTG 922
Query: 602 LLNLMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL 660
L+ + + + +A R+ QS E LD R +LG +++ + + + +E+
Sbjct: 923 LITPKAGFDSDYDQALADIRENEQSLLEYLDKQ----RSRLGCKSIVYWGIGRNRYQLEI 978
Query: 661 PANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
P NF +P + ++ K RY + + L L A E + F
Sbjct: 979 PENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFCNFD 1038
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVFV---DDHEPVQIHICSGRHPVL 772
+ ++Q+AV+ +A LD L LA S+ + RP V +D P + RHP +
Sbjct: 1039 KNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPGEDTHPF-LEFKGSRHPCI 1097
Query: 773 -DTILLDNFVPNDTNLHAERE-------YCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
T D+F+PND + E E YC ++TGPNMGGKS IRQ L+ +MAQ+G +
Sbjct: 1098 TKTFFGDDFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVMAQLGCY 1157
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA L +D ++TR+GASD I G STF EL+E + ILR+ TA SLV+VDELGRGT
Sbjct: 1158 VPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDELGRGT 1217
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
+T DG AIA A + L E KC LF THY + + +K + V H++ + ++ P
Sbjct: 1218 ATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSK-SVCVRLGHMACMVENECEDP 1276
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
S + +T+LYK + G S+GF A+LA LP I + A + E
Sbjct: 1277 ----SQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFE 1322
>gi|363751194|ref|XP_003645814.1| hypothetical protein Ecym_3519 [Eremothecium cymbalariae DBVPG#7215]
gi|356889448|gb|AET38997.1| Hypothetical protein Ecym_3519 [Eremothecium cymbalariae DBVPG#7215]
Length = 1233
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 255/960 (26%), Positives = 412/960 (42%), Gaps = 156/960 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV--LGIYAHLDHNFMTASI 145
K+TP E+Q ++K+K D ++ + G F + +DA +A ++ L I N A I
Sbjct: 305 KFTPFEKQYWQIKSKMWDCIVFFKKGKFFELYEKDAHLANQLFDLKIAGGGRANMQLAGI 364
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDV 205
P + + G+KV V Q E+ K G G R L + T TL
Sbjct: 365 PEMSFEYWASQFIQNGYKVAKVDQKESMLAKEMREGNKGIVERELQCVLTSGTLT----- 419
Query: 206 GGGEDGCGGESNYLVCV------VD----DDGNVGKIRNGVFGDGFDVRLGVVAVEISTG 255
E G C+ +D D N G F GV ++ +TG
Sbjct: 420 ---ESGMLQTDLATYCMAIREEPIDYYNLDCHNHSSTEKNSTGKYF----GVSIIDTATG 472
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEKMLLAYAGPAS--NVRV--- 309
+ EF D S L+ ++ + P E+++ + LS K++ P + N R
Sbjct: 473 HIKMLEFEDDNECSQLDTLVAQVKPKEVIIERKNLSTLAHKIVKFNVQPDAIFNYRTPEE 532
Query: 310 ---------ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
E + F + +V+ Y N G+ G H A G
Sbjct: 533 FYDFNRTYDEIVTHGYFPNMESWPQVLQEYYNKGKKV--------------GFH--AFGG 576
Query: 361 IMNMPDLAVQALAL-TIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNN 419
+++ L+L T+ ++Q+ + + L TLQ LE+ N+
Sbjct: 577 LLSYLQWLKLDLSLVTMGQIEQYDHTKSQGF------------LCLDGITLQNLEIFANS 624
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
+GS+ GTL ++NH +T G R +R WV HPL ++ I RLD+V ++ M
Sbjct: 625 FDGSDKGTLFKLLNHAITPMGKRAIRNWVMHPLLNKQHIDERLDSVDQLLSDM------- 677
Query: 480 SVGQHDEKNSDVT-IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA 538
D+ I+E F + PD++R ++RI T SEF V+
Sbjct: 678 ----------DIRGIIESAFIGL-----------PDLERLLSRIHSNTLKISEFDKVITG 716
Query: 539 ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK---- 594
K +Q L+ K K LK + +T ++T NK
Sbjct: 717 FETVSKLVQDLN-------KYELKGSLLKFLKEIPITLEGD---------INTWNKVYDR 760
Query: 595 -EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+A +G L I + G E ++ + + E S++ +K+L ++++
Sbjct: 761 NKAVHEGAL----IPNKGVEQEFDKSIDRINELENEFSSMLREYKKELKCSSIQYKDSGK 816
Query: 654 ITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
+ IE+P + VP NW ++ S K T RY+SP V +A A E I+
Sbjct: 817 EIYTIEIPISVCKNVPSNWTQMGSNKSTKRYYSPTVQKMARAMAEAREHHKILEEGLKGK 876
Query: 712 FLKEFGGYYAE-FQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSG- 767
++F Y+ + +++++ +DC+ +L+ S F RPVF D + H +G
Sbjct: 877 LYQKFDMKYSTVWLPTIRSISNIDCILSLSRASEGLGFPACRPVFHDSTDTKTGHKSNGF 936
Query: 768 ------RHPVLD--TILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMA 819
RHP + +F+PND L + ++TG N GKS +R + IMA
Sbjct: 937 LSFKQLRHPCFNMGATAATDFIPNDVTLGRDTAQLALLTGANAAGKSTVLRMTCVAVIMA 996
Query: 820 QVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDE 879
Q+G +VP AEL +D I TR+GA+D+I QG+STF EL+E IL T +SL+++DE
Sbjct: 997 QLGCYVPCEVAELTPVDRIMTRIGANDNIMQGKSTFFVELSETKKILDMATNRSLLVLDE 1056
Query: 880 LGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
LGRG S++DG AIA ++ H + + F THY G++G + H
Sbjct: 1057 LGRGGSSNDGFAIAEGVFHHIATHVQSLGFFATHY-----------GTLG----QSFSHH 1101
Query: 940 KVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ P+ ++ ++VT+LYK++ G SE SFG VA + +P + RA A LE
Sbjct: 1102 PMIKPLKMSILVDEASRNVTFLYKLIEGQSEGSFGMHVASMCGIPRQIVDRAEKTADTLE 1161
>gi|334146183|ref|YP_004509110.1| DNA mismatch repair protein MutS [Porphyromonas gingivalis TDC60]
gi|333803337|dbj|BAK24544.1| DNA mismatch repair protein MutS [Porphyromonas gingivalis TDC60]
Length = 881
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 259/923 (28%), Positives = 435/923 (47%), Gaps = 150/923 (16%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMT-ASIPTF 148
+Q ++K K+PD +L+ VG + F EDA +A+++LGI N F+ A P
Sbjct: 2 RQYFQIKQKHPDAILLFRVGDFYETFSEDAIVASEILGITLTRRANGAAQFVELAGFPHH 61
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDVGG 207
L+ ++ +LV AG +V + Q E P K RG++ L T V
Sbjct: 62 ALDTYLPKLVRAGKRVAICDQLED-------PKKTKTLVKRGITELVTPG-------VST 107
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
++ + N + V D V G+ ++ISTG+ + G+ N ++
Sbjct: 108 NDNVLSHKENNFLAAVSCDKEV---------------FGISLLDISTGEFMAGQGNADYV 152
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
E +L + P E+L+ +++E+ D F G + ++
Sbjct: 153 ----EKLLTNYRPKEILV-----ERSER---------------SRFNDLFHWSGFIFDM- 187
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL---KQFGL 384
ED ++E+ + V + + +S + +AV A + +L + L
Sbjct: 188 -------EDWAFSSENNRLRVLKHFDLKSLKGFGLEELSMAVTAAGAVLNYLDLTQHHQL 240
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
+ I L L + + L T++ LE+L + G + +LL I++HT+T G+R +
Sbjct: 241 QHITSLS----RLDENRYVRLDKFTVRSLELLSPMNEGGK--SLLDIIDHTITPMGARRI 294
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
R+W+ PL D I AR R E +H E+ + I++
Sbjct: 295 RQWIVFPLKDPARIQAR-------------QRVVEFFFRHTEERA-----------IIAE 330
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--HIDGEYREKVTSK 562
LT +G D++R +T+ +P E + ++ L A + ++++ H D E + K
Sbjct: 331 HLTEIG---DLERLVTKGAMGRISPREIVQ-LRVALQALEPIKEVCTHADEENLRALGEK 386
Query: 563 -TLHSALLKRLI--LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
L L R++ + +PA +G+ +I++G + +
Sbjct: 387 LELCKELRDRILREVMPDAPAALGRGP--------------------VIAHGVDATLDEL 426
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTK 677
R S K+ L L ++ G+ +L+ + + IE+ K VP W + +
Sbjct: 427 RALAYSGKDYLIKLQQQEIERTGIPSLKVAYNNVFGYYIEVRNTHKDKVPAEWIRKQTLV 486
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
RY + E+ ++ A E++ + + + E Y A Q QA+A+LDCL
Sbjct: 487 SAERYITEELKEYEAKILGAEEKIAALEGQLYALLVAELQRYVAPLQQDSQAVASLDCLL 546
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNLHAEREYCQ 795
+ A +R F+ PV VD E I I +GRHPV++ L + ++ ND L +R+
Sbjct: 547 SFAESARRYRFICPV-VD--ESFTIDIKAGRHPVIEQQLPADEPYIANDIYLDTDRQQVI 603
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
I+TGPNM GKS +RQ ALI +MAQ+GSFVPA SA + ++D I+TR+GASD+I G STF
Sbjct: 604 IVTGPNMSGKSALLRQTALISLMAQIGSFVPAESARIGMVDSIFTRVGASDNISMGESTF 663
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVLFVTH 913
+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA++ ++Y+ ++ K LF TH
Sbjct: 664 MVEMQEASNILNNLTPRSLVLFDELGRGTSTYDGISIAWSIVEYIHDNPKAHPRTLFATH 723
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ +++ G + H +++ +V G M +L K+ PG S SFG +VA
Sbjct: 724 YHELNELE----GQLDRVHNFNVSAREVDGKM--------LFLRKLEPGGSAHSFGIQVA 771
Query: 974 QLAQLPPSCISRATVIAAKLEAE 996
+L +P + RAT I +LE E
Sbjct: 772 RLGGMPHHIVQRATDILHRLEQE 794
>gi|148706690|gb|EDL38637.1| mCG15886 [Mus musculus]
Length = 1379
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 272/1010 (26%), Positives = 436/1010 (43%), Gaps = 146/1010 (14%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P+ +P TL +P + TP ++ +LK++ D+++ +VG + +
Sbjct: 404 RRPDHPEFNPTTLY-VPEEFLNSC-----TPGMRKWWQLKSQNFDLVIFYKVGKFYELYH 457
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK---- 176
DA + LG+ + N+ + P LV G+KV V+QTET +
Sbjct: 458 MDAVIGVSELGLI-FMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARC 516
Query: 177 ---AHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
AH R + + TK T + G D S YL+ + + +
Sbjct: 517 RKMAHVSKFDRVVRREICRIITKGTQTYSVLDG---DPSENYSRYLLSLKEKEEETS--- 570
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
G GV V+ S G G+F+D S ++ P ++L + LS +
Sbjct: 571 ------GHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILFEKGNLSTE 624
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
T+ +L G S+ C G +L + + N D + +P
Sbjct: 625 TKTVL---KGSLSS----CLQEGLIPGSQFWDATKTLRTLLEGGYFTGNGDSSTVLP--- 674
Query: 353 NHRSAIEGIMNMPD-----------LAVQALALTIRHLKQFGLERIMCLGASFRSL---- 397
++G+ + D LA+ AL + +LK+ +++ + A+F
Sbjct: 675 ---LVLKGMTSESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLD 731
Query: 398 --------------SGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
S M L A TL LE+ N +NGS GTLL ++ T +G RL
Sbjct: 732 SDTVSTVKPGAVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRL 791
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
L++W+ PLC + IS RLDAV ++ + P ++
Sbjct: 792 LKQWLCAPLCSPSAISDRLDAVEDL------------------------MAVPDKVTEVA 827
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATP--SEFIAVMQAILYAGKQLQQLHI-------DG- 553
+L L PD++R +++I H +P S+ +AI+Y + I +G
Sbjct: 828 DLLKKL---PDLERLLSKI-HNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGF 883
Query: 554 -----------EYREKVTSKTLHSAL-LKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
E TSKTL + L+ P + + + + + E A +
Sbjct: 884 KVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTG 943
Query: 602 LLNLMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL 660
L+ + + + +A R+ QS E LD R +LG +++ + + + +E+
Sbjct: 944 LITPKAGFDSDYDQALADIRENEQSLLEYLDKQ----RSRLGCKSIVYWGIGRNRYQLEI 999
Query: 661 PANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
P NF +P + ++ K RY + + L L A E + F
Sbjct: 1000 PENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFCNFD 1059
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVFV---DDHEPVQIHICSGRHPVL 772
+ ++Q+AV+ +A LD L LA S+ + RP V +D P + RHP +
Sbjct: 1060 KNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPGEDTHPF-LEFKGSRHPCI 1118
Query: 773 -DTILLDNFVPNDTNLHAERE-------YCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
T D+F+PND + E E YC ++TGPNMGGKS IRQ L+ +MAQ+G +
Sbjct: 1119 TKTFFGDDFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVMAQLGCY 1178
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA L +D ++TR+GASD I G STF EL+E + ILR+ TA SLV+VDELGRGT
Sbjct: 1179 VPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDELGRGT 1238
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
+T DG AIA A + L E KC LF THY + + +K + V H++ + ++ P
Sbjct: 1239 ATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSK-SVCVRLGHMACMVENECEDP 1297
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
S + +T+LYK + G S+GF A+LA LP I + A + E
Sbjct: 1298 ----SQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFE 1343
>gi|349577164|dbj|GAA22333.1| K7_Msh6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1242
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 265/1030 (25%), Positives = 443/1030 (43%), Gaps = 151/1030 (14%)
Query: 7 QVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKKP 66
Q SR + P +Q +A+S +S + + V A+R+ PK+ P
Sbjct: 247 QAPSRSYTPSHSQPSATSKSSKFNKQNE---ERYQWLVDERDAQRR-------PKS--DP 294
Query: 67 KLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMA 126
+ P TL IP+ + K+TP E+Q E+K+K D ++ + G F + +DA +A
Sbjct: 295 EYDPRTLY-IPSSAWN-----KFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDALLA 348
Query: 127 AKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
+ L I N A IP + + G+KV V Q E+ K G G
Sbjct: 349 NALFDLKIAGGGRANMQLAGIPEMSFEYWAAQFIQMGYKVAKVDQRESMLAKEMREGSKG 408
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN------------VGKI 232
R L + T TL G+ + + + + ++ GN V K+
Sbjct: 409 IVKRELQCILTSGTL------TDGDMLHSDLATFCLAIREEPGNFYNETQLDSSTIVQKL 462
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSK 291
+FG F ++ +TG++ EF D + L+ ++ + P E+++ + LS
Sbjct: 463 NTKIFGAAF--------IDTATGELQMLEFEDDSECTKLDTLMSQVRPMEVVMERNNLST 514
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSL-YENMGED---TLSNNEDQNMD 347
K++ + P + A + + AE++S Y + ED L + D
Sbjct: 515 LANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEIISSEYFSTEEDWPEVLKSYYDTGKK 574
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALAL-TIRHLKQFGLERIMCLGASFRSLSGSMEMTLS 406
V SA G++ L +++++K++ + M L
Sbjct: 575 V-----GFSAFGGLLYYLKWLKLDKNLISMKNIKEYDF------------VKSQHSMVLD 617
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TLQ LE+ N+ +GS+ GTL + N +T G R++++W+ HPL +N I +RLD+V
Sbjct: 618 GITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGKRMMKKWLMHPLLRKNDIESRLDSVD 677
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
+ + D+T+ E + + + PD++R + I RT
Sbjct: 678 SLLQ-------------------DITLRE--------QLEITFSKLPDLERMLAGIHSRT 710
Query: 527 ATPSEF---IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIG 583
+F I + I+ L+ + G+ + + +S P +
Sbjct: 711 IKVKDFEKVITAFETIIELQDSLKNNDLKGDVSKYI----------------SSFPEGLV 754
Query: 584 KAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+A K S N + N+++ G E ++ +Q ++EL ++ RKQ
Sbjct: 755 EAVK--SWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELMEILMTYRKQFKC 812
Query: 644 RNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
N+++ + IE+P A VP NW ++ + K RY+S EV +A A E
Sbjct: 813 SNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEVRALARSMAEAKEIH 872
Query: 702 TIVCRAAWDSFLKEFGGYYAE-FQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHE 758
+ + ++F +Y + +QA++ +DCL A+ S RP VD+ +
Sbjct: 873 KTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYLGAPSCRPTIVDEVD 932
Query: 759 PVQ-------IHICSGRHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
+ S RHP L +F+PND L E+ ++TG N GKS +
Sbjct: 933 SKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKEQPRLGLLTGANAAGKSTIL 992
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
R + IMAQ+G +VP SA L +D I TR+GA+D+I QG+STF EL E IL
Sbjct: 993 RMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKSTFFVELAETKKILDMA 1052
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG 929
T +SL++VDELGRG S+ DG AIA + L ++ H + + F THY +A
Sbjct: 1053 TNRSLLVVDELGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLA----------- 1101
Query: 930 TYHVSYLTSHKVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCIS 984
S H + P+ ++ ++VT+LYK++ G SE SFG VA + + I
Sbjct: 1102 ----SSFKHHPQVRPLKMSILVDEATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIID 1157
Query: 985 RATVIAAKLE 994
A + A LE
Sbjct: 1158 NAQIAADNLE 1167
>gi|254796716|ref|YP_003081552.1| DNA mismatch repair protein MutS [Neorickettsia risticii str.
Illinois]
gi|254589940|gb|ACT69302.1| DNA mismatch repair protein MutS [Neorickettsia risticii str.
Illinois]
Length = 815
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 252/942 (26%), Positives = 425/942 (45%), Gaps = 151/942 (16%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNF 140
++++ P ++ +E++ +YPD ++ VG + F EDA + +LG++ + +
Sbjct: 2 SEEFPPAMKRYLEVRCQYPDAVIFYRVGDFYEMFFEDAREVSALLGLHLTRRGTYKGKDI 61
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLE 200
+P V++ +LV G KV + +Q ETA +A G R + L T TL
Sbjct: 62 PMCGVPVSSYEVYINKLVKLGRKVAICEQLETAE-EAKKRGATAIVRRDVVRLVTPGTL- 119
Query: 201 AAEDVGGGEDG--CGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
ED GE+NYL CV +G + ++IST +V
Sbjct: 120 -------TEDNLLVSGENNYLFCVAPGKNEIG----------------IAWLDISTKKIV 156
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ + + LE+ L+ P E+LL + + K++ + N+ + + F
Sbjct: 157 FTSASP----ASLESYLVKTEPKEVLLPDTIDSELRKLIEQH-----NIHITRRPNNLFQ 207
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG--NHRSAIEGIMNMPDLAVQALALTI 376
A E+ Y +V + G + RS E I+ L A A +
Sbjct: 208 FEYAENELRGFY----------------NVLQLGFMDARSPCE-IVACGALIAYARATQM 250
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
LKQ + R G + L A+T++ LE++ + + G E +LL +++ T
Sbjct: 251 GELKQLEFPK--------RYERGHY-LELDASTVRGLELIESQTPG-EKNSLLQVIDQTC 300
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G RLL+ ++ PL I R D V
Sbjct: 301 TAGGKRLLKSYIVSPLISVEEIQTRQDRV------------------------------- 329
Query: 497 QFYYI----LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQL 549
+F++I V T L PD +R ++RI P + +AV M+A L +
Sbjct: 330 EFFFIQEELRKKVRTELSNIPDAERALSRIALNRGEPIDCLAVLSCMKASLLLAEHFSSF 389
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
D +Y + K + L + TA P + + + + LL L ++S
Sbjct: 390 LKD-DYIRSIYDKCAPNDELMETLRTAFLPT----SNRKVDGPFLDPTYHPKLLELNMLS 444
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLN 669
+A ++ L+ ++ G+ +L+ + I + +E+P + P+
Sbjct: 445 T--------------NADVVMNDLLITYKRNTGINSLKLGKNNLIGYYVEVPKS--APVL 488
Query: 670 WAKV----NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
+KV S IRY + E+ Q+A ANE + + ++ + +
Sbjct: 489 DSKVFIHRQSLLNNIRYTTLELQNLEAQIAKANENYRKLELELFRELCEKILASESPLKE 548
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDT 785
+ A+A LD + + A ++ + +VRP + +E + I GRHP ++ + + FVPND
Sbjct: 549 MIAAMAELDVIVSFAEIAVQRKYVRPQVDNSNE---LRISGGRHPFVEQV--NAFVPNDL 603
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
+E C ++TGPNM GKS Y+RQ ALI ++AQ+GSFVPA SA + V+D +++R+GAS
Sbjct: 604 AFTSEERVC-VLTGPNMAGKSTYLRQNALITVLAQMGSFVPADSAHIGVVDRVFSRIGAS 662
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D+I +G+STF+ E+ E + I+ N T +SLVI+DE+GRGTST DG++IA A L+YL +
Sbjct: 663 DNIARGKSTFMVEMMETANIVNNATCRSLVILDEVGRGTSTLDGISIAQAVLEYLHDSVN 722
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
C +F THY ++ D+++K L K + ++ +YKVVPG +
Sbjct: 723 CKTIFATHYNELCDLESK------------LPRMKCYSIEVKRWRDEIFLMYKVVPGRGD 770
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
S+G A L+ +P S I RAT IA + + S + N K
Sbjct: 771 KSYGIHTAMLSGIPESIIRRATEIAKEKNLSMESSLSNERIK 812
>gi|187779607|ref|ZP_02996080.1| hypothetical protein CLOSPO_03203 [Clostridium sporogenes ATCC 15579]
gi|187773232|gb|EDU37034.1| DNA mismatch repair protein MutS [Clostridium sporogenes ATCC 15579]
Length = 931
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 254/942 (26%), Positives = 432/942 (45%), Gaps = 152/942 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q +E+K D +L +G + F EDA++A+K L G L+
Sbjct: 4 TPMMKQYLEVKESCKDCILFFRLGDFYEMFFEDAKVASKELELVLTGRDCGLEERAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP N ++ RLV+AG+K+ + +Q E + G RG+ + T T D
Sbjct: 64 IPYHAANTYIGRLVSAGYKIAICEQLEDPS------ASKGIVKRGIIKIITPGTYT---D 114
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
E+ ++NY++ DD +S D+ GEFN
Sbjct: 115 SSFLEEN---KNNYIMSFYLDDN---------------------MCSMSFADISTGEFNS 150
Query: 265 GFLRSGLEAVLLS----LSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ EAV+L +P E++L + E + N+ +
Sbjct: 151 TH-SNFKEAVVLDEISKFAPREIVLDE---NTEEDFIHTIKERFPNISIS---------- 196
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ E+ S N D N+ + E I+ + L I H +
Sbjct: 197 -----------KIKEENFSYNIDNNLKDQFSNFNEDEYETIVKK---SANGLLYYIFHTQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + + S+ + T+ N+ + LE+ N ++ G+LL +++ T T G
Sbjct: 243 KNILSNINKI--DYYSIVDYL--TIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTAMG 298
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R LRRW+ PL ++N I RL+AV E+ ++ Q D K
Sbjct: 299 GRQLRRWIEQPLINKNPIEDRLNAVEELLNNISL--------QEDLKED----------- 339
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHID---GE 554
L S+ DI+R + ++ ++ E I++ + I Y + L D
Sbjct: 340 -LRSIY-------DIERIVGKVASKSVNAKELISLKCSIGKIPYIKEYLANFKSDLFLNM 391
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+ T + +H L K L+ SP++ + +G+ II G
Sbjct: 392 EQNIDTLEDIHELLDKSLL---DSPSL--------------SVKEGN-----IIKEGFNE 429
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPL-NWA 671
EV R+A + K+ + SL +++ G+++L+ + IE+ AN VP +
Sbjct: 430 EVDSLREAKSNGKKWIASLEQKEKEETGIKSLKVSYNKVFGYFIEITKANLSSVPEGRYI 489
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQAL 730
+ + RY +PE L +++ L EE I + +++F Q + +
Sbjct: 490 RKQTLANAERYITPE-LKEMEEKILGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARII 548
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHA 789
+ +DCL +LAT++ N+++P + +I I GRHPV++ ++ F+ ND+ +
Sbjct: 549 SDIDCLCSLATVALENNYIKPNI---NAKDEILIEEGRHPVVEKVIPKGEFISNDSLIDT 605
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ +ITGPNM GKS Y+RQVALI IMAQ+GSFVPA A + + D I+TR+GASD +
Sbjct: 606 KENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKKANISICDKIFTRIGASDDLA 665
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCM 907
G+STF+ E+ E S IL+N T++SLV++DE+GRGTST+DG++IA++ ++Y+ +K +C
Sbjct: 666 AGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCK 725
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ ++ G V Y VS S+ + ++ +L K++ G ++ S
Sbjct: 726 TLFATHYHELTKLEDNIEG-VKNYSVSV-----------SELENEIVFLRKIIRGGADQS 773
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRD 1009
+G +VA+LA LP I+RA I +E + N + R+
Sbjct: 774 YGIEVAKLAGLPSPVINRAKEILQHIEGDTEENSLNITTSRE 815
>gi|397690923|ref|YP_006528177.1| DNA mismatch repair protein MutS [Melioribacter roseus P3M]
gi|395812415|gb|AFN75164.1| DNA mismatch repair protein MutS [Melioribacter roseus P3M]
Length = 872
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 267/961 (27%), Positives = 447/961 (46%), Gaps = 140/961 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL Q +K +YPD +L+ +G + F EDA++A+KVLGI N A
Sbjct: 4 TPLMAQYTRIKKEYPDTILLFRMGDFYETFEEDAKIASKVLGITLTKRANGAAEDVPLAG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P ++ ++ +LV AG++V V +Q E + G R + + T + +
Sbjct: 64 FPHHAIDSYLPKLVRAGYRVAVCEQVEDPKLAK------GIVKREVIEVVTPGVAFSDKL 117
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ NYL+ ++GDG R G+ +ISTG+ E +
Sbjct: 118 LDHKKN------NYLL--------------SIYGDG--ERYGLAFCDISTGEFQTYETDK 155
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
L L + +PAE+L+ + L E ++ YA A +++ D
Sbjct: 156 KLLPEQLGLI----NPAEILIPKKLKNLLEPLIGRYAKDARITKIDDWIYDF-------- 203
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ +D + N+ +V GI NM +LAV A + +L++
Sbjct: 204 -------DYCQDLILNH----FEVKTLKGF-----GIENM-NLAVSAAGAALNYLRETQK 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
+ + + + M L T + LE+L +G G+L+ I++ T T G RLL
Sbjct: 247 ANLPHIN-RISVYNPTEYMALDYATKRNLEILFTIQSGEREGSLISILDKTSTSMGGRLL 305
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
+RW+T PL I R + V E+ E+ S R + L
Sbjct: 306 KRWITTPLKKLEPILKRQECVEELFEN-KSLRKN-----------------------LRE 341
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
L+ +G DI+R I R P E I + + L+++H+ + ++ +++TL
Sbjct: 342 ELSEIG---DIERLIARACTGRINPREVINLKNS-------LKKIHLIKQLLDQSSAETL 391
Query: 565 HSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
R I +P + AK+ + +N+E L + +I G E+ R
Sbjct: 392 ------RQINDNMNP-LEELVAKIENAINEEPP--ASLHDGGVIKPGYNPELDELRSLAF 442
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVPLNWAKVNSTKKTIRY 682
+AKE + +L R++ G+ +L+ + IE+ AN KVP ++ + + + RY
Sbjct: 443 NAKEWIANLQKEERQKTGVSSLKVSYNKVFGYYIEISHANKDKVPAHYIRKQTLVNSERY 502
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
+PE+ +++ A + + + ++ + Q + +A LDC + A
Sbjct: 503 ITPELKEYEEKILNAQDNIAKLEFELFEQIRYQIAAATERVQTNARLIAMLDCFLSFAEC 562
Query: 743 SRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQIITGP 800
+ N+V+P D I I GRHPV++ IL + F PN L + + I+TGP
Sbjct: 563 AEQYNYVKPTVDDS---DVIDIVDGRHPVVEQILPPGEKFTPNSCRLSSSEDQIIILTGP 619
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NM GKS Y+RQ+ LI +MAQ+GS+VPA A + ++D I+TR+GASD+I G STFL E+
Sbjct: 620 NMAGKSVYLRQIGLIVLMAQIGSYVPAKEARIGIVDRIFTRVGASDNITTGESTFLVEMQ 679
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVTHYPKIA 918
EA+ IL N T +SL+++DE+GRGTST DG++IA+A +YL E+ + LF THY ++
Sbjct: 680 EAANILNNATNKSLILLDEIGRGTSTFDGISIAWAITEYLHENPEIAAKTLFATHYHELN 739
Query: 919 DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQ 977
++ F + Y V D + D V +L+KV PG ++ S+G +VAQ+A
Sbjct: 740 EMAEIFP-RIKNYKV------------DVREYGDKVIFLHKVKPGGADHSYGIQVAQMAG 786
Query: 978 LPPSCISRATVIAAKLEA----------EVSSRVQNRSAKRDLLVKLSDQEQEAQ-ENMP 1026
LP +RA I LE+ E SR++ + L ++ D+E + E++P
Sbjct: 787 LPVYVTNRAKEILLNLESKELTPYEIKKEKISRIRKNDEMQISLFEMKDEELRKEIEDLP 846
Query: 1027 V 1027
+
Sbjct: 847 I 847
>gi|336397760|ref|ZP_08578560.1| DNA mismatch repair protein MutS [Prevotella multisaccharivorax DSM
17128]
gi|336067496|gb|EGN56130.1| DNA mismatch repair protein MutS [Prevotella multisaccharivorax DSM
17128]
Length = 891
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 258/949 (27%), Positives = 451/949 (47%), Gaps = 164/949 (17%)
Query: 81 SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNF 140
SQ+++N TP+ +Q +K K+PD LL+ G + + +DA A+++LG+ +N
Sbjct: 4 SQSSNNT-LTPMMRQFFSMKAKHPDALLLFRCGDFYETYCDDAVEASRILGLTLTRRNNG 62
Query: 141 MTAS-----IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK-AHGPGKAG------PFGR 188
+A P L+ ++ +L+ AG +V + Q E K A G+ G R
Sbjct: 63 ASAGAEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKRAMIKGRKGLTEMDKMVKR 122
Query: 189 GLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
G++ L T + +++V + E+N+L V + GK G+
Sbjct: 123 GITELVTPG-VAMSDNVLNYK-----ENNFLAAV-----HFGK-----------ASCGIS 160
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVR 308
++ISTG+ + G+ + ++ E ++ + SP E+L + K E+ Y G +
Sbjct: 161 FLDISTGEFLTGQGSYDYV----EKLIGNFSPKEVLYDKTRRKDFEQ----YFG----TK 208
Query: 309 VECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA 368
+ D ++ A L ++ G +L + V + A IM +L
Sbjct: 209 LTVFELDDWVFTEQTAR-QKLLKHFGTKSL-----KGFGVEHLKDGIVASGAIMQYLELT 262
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
I H+ S + L + + T++ LE+L+ + +L
Sbjct: 263 QHT---NINHI------------TSLKRLEEEKYVRMDKFTIRSLELLQPMQEDGK--SL 305
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
L +++ T+T G RLLRRW+ PL D I+ RLD V ++
Sbjct: 306 LDVIDRTITPMGGRLLRRWMVFPLKDVRHINDRLDVVEYFFKA----------------- 348
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAI------ 539
P F ++ L +G D++R I+++ TP E + + +QAI
Sbjct: 349 -------PDFRQVIDEQLHRVG---DLERIISKVAVGRVTPREVVQLKTALQAIQPIKSA 398
Query: 540 -LYAG----KQL-QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN 593
LYA K+L +Q+++ R+++ + + P ++ K
Sbjct: 399 CLYANNGSLKRLGEQMNLCESLRDRIEKE-----------IQPDPPQLVSK--------- 438
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
GD +I+ G +E+ + R + K+ L + ++ G+ +L+ +
Sbjct: 439 ------GD-----VIAEGFSTELDQLRHISRGGKDYLLEIQQREAEKTGITSLKVGYNNV 487
Query: 654 ITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
+ +E+ FK VP +W + + + RY +PE+ +++ A+E++ + +
Sbjct: 488 FGYYLEVRNTFKDHVPADWIRKQTLAQAERYITPELKQYEEKILGADEKILELEAQLFSE 547
Query: 712 FLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPV 771
+ + + + Q LA +DC+ + A +S + +VRPV VDD + I GRH V
Sbjct: 548 LIVDMQEFIPQIQINANILAHIDCVLSFAKVSEDNAYVRPV-VDDTTVLDIR--QGRHAV 604
Query: 772 LDTI--LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
++T L + +VPND L E++ +ITGPNM GKS +RQ ALI ++AQ+G FVPA S
Sbjct: 605 IETQMPLGERYVPNDVYLDTEKQQVMMITGPNMAGKSALLRQTALIVLLAQMGCFVPAES 664
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
A + ++D I+TR+GASD++ G STF+ E+ EA+ IL N ++ SLV+ DELGRGTST+DG
Sbjct: 665 ARVGLVDKIFTRVGASDNLSLGESTFMVEMTEAADILNNVSSHSLVLFDELGRGTSTYDG 724
Query: 890 VAIAYATLDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
++IA+A ++YL EH+ + LF THY ++ +++ F + Y+V+ K +G
Sbjct: 725 ISIAWAIVEYLHEHRGSQARTLFATHYHELNEMEKHFQ-RIKNYNVAV----KEIGG--- 776
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
V +L K+ PG SE SFG VA++A +P S + RA + +LEA+
Sbjct: 777 ----KVIFLRKLTPGGSEHSFGIHVAEIAGMPRSIVRRANEVLKELEAD 821
>gi|435853699|ref|YP_007315018.1| DNA mismatch repair protein MutS [Halobacteroides halobius DSM 5150]
gi|433670110|gb|AGB40925.1| DNA mismatch repair protein MutS [Halobacteroides halobius DSM 5150]
Length = 878
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 257/940 (27%), Positives = 443/940 (47%), Gaps = 131/940 (13%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFM-----TAS 144
TPL QQ +K Y + +L +G + F +DA++AA+ L + + A
Sbjct: 5 TPLMQQYFSIKDNYQEEILFFRLGDFYEMFAKDAQIAARELELTLTARNKGSGEETPMAG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +L+ G+KV + +Q E +G R + + T T+ D
Sbjct: 65 VPCKSAESYIAQLIEMGYKVAICEQVEDPK------ATSGLVKREVVRVVTPGTV-VNND 117
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ +D +NYL ++ GN DGF G V++STG+ V + +
Sbjct: 118 LLEDKD-----NNYLAAII---GN---------QDGF----GFAVVDVSTGEFVTTQLDG 156
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLA--YAGPA-SNVRVECASRDCFIGGG 321
+ + L ++PAE+LL + + E + P S + +++ +
Sbjct: 157 PTQINKVIDELSRINPAEILLDNKVEETEEIIEFIDNQLNPILSKTKEGFTTKEAYRLLT 216
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+V++L E G + L AI+ + D V+ ++ H+ Q
Sbjct: 217 DQFDVVNL-EGFGCEELP----------------LAIQAAGAILDFLVETQKRSLNHINQ 259
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ S + M L ANT + LE+ + + S+ G+LL +++ T+T G
Sbjct: 260 LA------------TYSTTDYMVLDANTRRNLELTQTMRDKSKRGSLLWVLDQTVTAMGG 307
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R L++WV PL + + I RLDAV EI +++ + + +
Sbjct: 308 RKLKKWVEQPLLELDRIEYRLDAVEEITKNI--------------------FAKEELKEL 347
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L+ V DI+R + +I + +A + I++ + LHI E +E +
Sbjct: 348 LTEVY-------DIERLLGKIIYGSANARDLISLKSS----------LHILPEVKEVLDQ 390
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
+ LK+L + + A L+ KE L II G +++ +
Sbjct: 391 --FKTPKLKKL---QDNLDKLEDVACLIENSIKEDPPTT-LTEGSIIKKGYDNQLDELLE 444
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNSTKKT 679
A+++ K+ + L R++ G+ +L+ + IE+ AN VP ++ + + +
Sbjct: 445 AMENGKQWIIDLQKQERERTGISSLKVGHNKVHGYYIEVTKANLDAVPEDYVRKQTLSNS 504
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY +PE+ + A E + + + Q + LA LD L +L
Sbjct: 505 ERYITPELKDKESVILGAQENSKELEYKLFVEIRDKVAQETERIQKSATILAQLDALLSL 564
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQIIT 798
A ++ N ++ +P D QI I +GRHPV++ ++ + FVPNDT L + + IIT
Sbjct: 565 AEVALNNDYTKPQLNTDD---QIDIEAGRHPVVEEMMEEEVFVPNDTYLDQQSDRFGIIT 621
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNM GKS Y+RQVALI ++AQ+GSFVPA A+L ++D I+TR+GASD + G+STF+ E
Sbjct: 622 GPNMSGKSTYMRQVALIVLLAQIGSFVPADKAKLSIVDRIFTRVGASDDLTTGQSTFMVE 681
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVTHYPK 916
+NE + IL N TA SL+I+DE+GRGTST+DG++IA+A +Y+ +K LF THY +
Sbjct: 682 MNEVANILNNATANSLIILDEVGRGTSTYDGLSIAWAVTEYISNPEKIGAKSLFATHYHE 741
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ +++ + G V Y+V+ + DV +L+K++PG + S+G +VA+LA
Sbjct: 742 LTELEERLPG-VRNYNVAV-----------KEEGDDVVFLHKIIPGEANQSYGIEVAKLA 789
Query: 977 QLPPSCISRATVIAAKLEAEVSSRV---QNRSAKRDLLVK 1013
+P +R+ I LE E +V N+S K++ +K
Sbjct: 790 GVPSEVTNRSKEILDWLEEEEDKKVTEDTNQSQKKENQIK 829
>gi|374995728|ref|YP_004971227.1| DNA mismatch repair protein MutS [Desulfosporosinus orientis DSM
765]
gi|357214094|gb|AET68712.1| DNA mismatch repair protein MutS [Desulfosporosinus orientis DSM
765]
Length = 850
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 258/922 (27%), Positives = 431/922 (46%), Gaps = 152/922 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +K K PD +L +G + FGEDAE+AA +L I A
Sbjct: 3 TPMMQQYHLIKEKVPDAILFFRLGDFYEMFGEDAEVAAPILQIALTGRDAGEGKRIPMCG 62
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ ++ +LV +G KV + +Q E A G R + + + TL A
Sbjct: 63 VPYHAVDNYLSKLVKSGHKVAICEQVEDAK------ASKGIVKRDIIRIVSPGTLTEA-- 114
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
SN+ + + F D + G+ +++STG+
Sbjct: 115 -------VAERSNHYLASI------------YFADHW----GLAFLDLSTGEFTV----- 146
Query: 265 GFLRSGLEAVLLSLS---PAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRD-CFIGG 320
F + ++ +L +S PAELLL L K+T K+ + Y C RD G
Sbjct: 147 -FQTADVDVLLTEISRINPAELLLTPELIKRT-KLWVGYY---------CTVRDRKTFDG 195
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM--NMPDLAVQALALTIRH 378
A+ E G+++L + P + + + MP + I
Sbjct: 196 NAIPEHFP-----GQESLFR------EFPAATRAATGLWTYLLETMPGVD----PTHIVE 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
+K + ER M L R ++E+T E LR GTLL +++ T T
Sbjct: 241 IKTYRTERWMFLDQWTRR---NLELT---------ESLRGVGKK---GTLLSVLDLTKTA 285
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
+G RLLR W+ PL ++ I RLD++ E+ S+S + D
Sbjct: 286 FGGRLLRHWIDKPLLLQDEIEGRLDSIQEL--------ISDSFLRKD------------- 324
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
+L L D++R + ++ + TA + +++ Q + L E
Sbjct: 325 ------LLKLLSEVYDLERLMGKVSYGTANAKDLLSLTQTLALLPDLCSLL--SSSRAET 376
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
+ +K L+ + AKL + +N A L + II G EV +
Sbjct: 377 LKTKVPMLGGLETFV------------AKLKNAIN--PAPPISLRDGNIIKTGYSREVDQ 422
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKVNST 676
R+ KE L L N R++ G+R+L+ + IE+ AN +P + + +
Sbjct: 423 LREIASGGKEWLAQLENAERERTGIRSLKIGYNKIFGYYIEVTHANAHLIPKEYQRKQTL 482
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
R+ +PE+ ++ A E+L + + + +E Q LA +D
Sbjct: 483 ANAERFITPELKDYELKIVGAEEKLKDLEYELFLALREEVRLQTKRIIQVAQILAEIDVF 542
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQ 795
+L+ ++ ++VRP +D E I I GRHPV++ +L N FVPNDT+L +E ++
Sbjct: 543 VSLSEVAVRNHYVRPQIKNDGE---ILITEGRHPVVEEMLEQNLFVPNDTHL-SESQHLA 598
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNM GKS Y+RQVALI +MA +GSFVPA +A + ++D I+TR+GASD + G+STF
Sbjct: 599 LITGPNMAGKSTYMRQVALIVLMAHIGSFVPAKNAGISLVDRIFTRVGASDDLAAGQSTF 658
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFVTH 913
+ E+ E ++IL+ + +SL+I+DE+GRGT+T+DG++IA+A ++L++H + LF TH
Sbjct: 659 MVEMQEVAHILKYASPKSLIILDEIGRGTATYDGLSIAWAVTEHLVKHPEFRPKTLFATH 718
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ ++ +F G + HV + +D+ +L+K++PG ++ S+G +VA
Sbjct: 719 YHELTQLQDEFAG-LFNLHVGV-----------KERGEDIVFLHKILPGRADRSYGIQVA 766
Query: 974 QLAQLPPSCISRATVIAAKLEA 995
+LA LPP + RA + +LE+
Sbjct: 767 RLAGLPPELLQRAKTLLLELES 788
>gi|238878303|gb|EEQ41941.1| hypothetical protein CAWG_00132 [Candida albicans WO-1]
Length = 1214
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 260/996 (26%), Positives = 426/996 (42%), Gaps = 134/996 (13%)
Query: 35 TPPPKIAATVSFSPAKRK-----------VVSSLFPPKTP-KKPKLSPHTLNPIPTPSSQ 82
TP PK S +P K+ +V K P P P TL IP +
Sbjct: 255 TPKPKSTTIKSLTPPKKSFEKENEERYQWLVDIRDAEKRPIDHPDYDPRTLY-IPQSAWS 313
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV--LGIYAHLDHNF 140
K+T E+Q ++K+K + ++ + G + + DA +A L I N
Sbjct: 314 -----KFTAFEKQYWQIKSKMWNTVVFFQKGKFYELYENDAVIANTQFDLKIAGGGRANM 368
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP---FGRGLSALYTKA 197
A IP + ++ G+KV V+Q E+ +K G R L + T
Sbjct: 369 KLAGIPEMSFEYWAKEFISHGYKVAKVEQKESMLVKQMRGGATKEEKIIERELKGILTAG 428
Query: 198 TLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
TL + + + Y + + ++D G GV V+ +T ++
Sbjct: 429 TLTNLDMIS------NDMATYCLSIKEEDKEDGT-----------KTFGVAFVDTATSEL 471
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYA-------GPASNVRVE 310
+ E +D + L+ ++ ++P E++ + Q +L + A N E
Sbjct: 472 NFIELDDDAECTKLDTLITQINPKEIICEKGNLCQIATKILKFCTHSDHQIWNALNPITE 531
Query: 311 CASRDCFIGGGALAEVM--SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA 368
D AL +++ Y+ D SN +D E NH+ A +
Sbjct: 532 FWDYDI-----ALEQLVKAKYYDAENLDDYSNYPKVLVDFKE--NHQVAFNAFGGLLYYL 584
Query: 369 VQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEY 425
T IM LG S + + M L TL LE+L N S+G+
Sbjct: 585 KMLKLDT----------SIMSLGNIHEYHISRNSASHMILDGVTLNNLEILNNTSDGTTK 634
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
GTL ++N T +G R L++WV HPL + I+ R D+V + R+
Sbjct: 635 GTLFKLVNRATTSFGKRQLQKWVLHPLFKVDEINQRYDSVDYLMNDGLELRS-------- 686
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
IL L ++ PD++R + R+ T +F+ V+++
Sbjct: 687 ---------------ILQDTLANI---PDLERLLARVHGGTLKFRDFLKVIESF------ 722
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
I G + V + S +L + + S P + + L ++A D+ N
Sbjct: 723 ---ESIAGVSSKLVDFTNVESGMLYKYL--KSFPHEM----RELIQQWEDAFDREQAKND 773
Query: 606 MII-SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
+I+ S G E ++ +++ K +LD L+ ++ + + + +LIE+P
Sbjct: 774 IIVPSAGTDEEFDNSQASMEDLKTQLDKLLKEYKRTYKSQEICYRDSGKEIYLIEVPFKL 833
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
KVP +W ++ ST K RY+SPEV T +L E +VC ++F +Y +
Sbjct: 834 KVPGDWKQMGSTSKVKRYYSPEVETLAKELRGQQELHKMVCDTLKIRMYEKFDKHYNVWM 893
Query: 725 AAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVP 782
+Q +A +DCL L S + RP ++ + I+ RHP + F+P
Sbjct: 894 QVIQTIANIDCLLTLTKASETIGYPSCRPKLIEADKGC-INFKELRHPCF--VSTKEFIP 950
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND L + + ++TG N GKS +R AL I++Q+G ++PA SAEL +D I TR+
Sbjct: 951 NDVQLGGDEPHFGLLTGANAAGKSTLMRTTALAIILSQIGCYIPAESAELTPVDRIMTRL 1010
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GA+D+I QG+STF EL+E IL N T +SLVI+DELGRG S+ DG AIA + L +L
Sbjct: 1011 GANDNILQGKSTFFVELSETKKILSNATPRSLVILDELGRGGSSSDGFAIAESVLHHLAT 1070
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV----MGPMDSKSDQDVTYLYK 958
H + + F THY GT +S+ T ++ MG + +++T+LYK
Sbjct: 1071 HVQSLGFFATHY--------------GTLGLSFKTHPQIKQLRMGIVVDSGSRNITFLYK 1116
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ G + SFG VA + +P + + A + A E
Sbjct: 1117 LETGTAPKSFGMNVASMCGIPDAIVDNAEIAAKAYE 1152
>gi|340350269|ref|ZP_08673265.1| DNA mismatch repair protein MutS [Prevotella nigrescens ATCC 33563]
gi|339608798|gb|EGQ13682.1| DNA mismatch repair protein MutS [Prevotella nigrescens ATCC 33563]
Length = 888
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 257/946 (27%), Positives = 430/946 (45%), Gaps = 167/946 (17%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS- 144
NK TP+ +Q +K K+PD L++ G + + +DA A+K+LGI +N A
Sbjct: 5 NKGLTPMMRQFFSMKEKHPDALMLFRCGDFYETYCDDAIEASKILGITLTRRNNGAAAGD 64
Query: 145 ----IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSAL 193
P L+ + +L+ AG +V + Q E K GK G RG++ L
Sbjct: 65 EMAGFPHHALDTFLPKLIRAGKRVAICDQLEDPKKKREALKGKRGLSAEDKMVRRGITEL 124
Query: 194 YTKATLEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
T V G++ E+N+L V FG G GV ++I
Sbjct: 125 VTPG-------VAMGDNVLNYKENNFLAAVH-------------FGKG---SCGVSFLDI 161
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E ++ + SP E+L + E+ R+
Sbjct: 162 STGEFLTGEGTFDYV----EKLIGNFSPKEVLYDRARKSDFERHF--------GTRLCVY 209
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
+ ++ L+ L ++ G L + V N A IM +L
Sbjct: 210 EMEDWVFTD-LSARHKLLKHFGTKNL-----KGFGVDHLNNGVIAAGAIMQYLELTQHT- 262
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGTLLHI 431
I H+ S + + L T++ LE++ +GS +LL++
Sbjct: 263 --NINHI------------TSLARIEEEKYVRLDRFTIRSLELVAPMQEDGS---SLLNV 305
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T+T G R+L RW+ PL D I+ RLD V +
Sbjct: 306 VDRTITPMGGRMLHRWLVFPLKDVKPINERLDIV------------------------EY 341
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI----------LY 541
EP F L+ L +G D++R I+++ +P E + + A+ LY
Sbjct: 342 YFREPDFRQCLNDQLHRMG---DLERIISKVAAGRVSPREVVQLKIALRAIQPMKTACLY 398
Query: 542 AGKQL-----QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA 596
A + +QL++ R+++ + + P ++ K
Sbjct: 399 ANNEALKRVGEQLNLCESIRDRIEQE-----------IKPDPPHLVAK------------ 435
Query: 597 ADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
GD +I++G +E+ R + K+ L + Q G+ +L+ + +
Sbjct: 436 ---GD-----VIAHGFNAELDELRSIRDNGKQVLLDIQEKEAAQTGISSLKIGFNNVFGY 487
Query: 657 LIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
+E+ FK VP +W + + + RY +PE+ ++ A+E++ + ++ ++
Sbjct: 488 YLEVRNTFKDKVPADWIRKQTLAQAERYITPELKEYEAKILGADEKILALEARLFNELVQ 547
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
+ + + Q +A LDCL A A ++ +VRP+ VDD + I I GRHPV++T
Sbjct: 548 DMQEFIPQIQINANLVARLDCLLAFANIAEENKYVRPM-VDD--SMVIDIKKGRHPVIET 604
Query: 775 ILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
L + ++PND L E++ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA A +
Sbjct: 605 QLPLGEPYIPNDVYLDNEQQQIMMITGPNMAGKSALLRQTALIVLLAQIGSFVPAEGARI 664
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
++D ++TR+GASD+I G STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++I
Sbjct: 665 GLVDKVFTRVGASDNISLGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISI 724
Query: 893 AYATLDYLLEHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
A+A ++YL E + LF THY ++ ++ F + ++VS + D
Sbjct: 725 AWAIVEYLHEQPRAAARTLFATHYHELNEMAKNFR-RIKNFNVSV-----------KEVD 772
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ ++ K+ G SE SFG VA +A +P S + RA V+ +LEA+
Sbjct: 773 GKIIFVRKLERGGSEHSFGIHVADIAGMPKSIVKRANVVLKELEAD 818
>gi|331091141|ref|ZP_08339983.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405363|gb|EGG84899.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
2_1_46FAA]
Length = 883
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 260/948 (27%), Positives = 444/948 (46%), Gaps = 141/948 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ QQ VE+K +Y D +L +G + F +DA A++ L G ++
Sbjct: 5 TPMMQQYVEMKKQYQDCILFYRLGDFYEMFFDDAVTASQELELTLTGKNCGMEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + ++ RLV+ G+KV + +Q E + G R + + T T +
Sbjct: 65 VPYHAVEGYLTRLVSKGYKVAICEQVEDPKVAK------GIVKREVVRIVTPGTNLNTQS 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ NY++C+V D R G+ +ISTGD E +
Sbjct: 119 LDESKN------NYIMCIV------------YIAD----RYGLSVADISTGDYFVTELDT 156
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
G R L+ + +P+E++ +P L + + + S D + A+
Sbjct: 157 G--RKLLDEIA-KFAPSEIICNEPFYMSG----LDIDDLKNRLGIAIYSLDAWYFDDAMC 209
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ L E+ +S+ E + G++ + G + + T+ HL
Sbjct: 210 TKI-LKEHF---KVSSLEGLGL-----GDYNCGVIGAGALLKYLYETQKTTLSHL----- 255
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
S + M L ++T + LE+ + G+LL +++ T T G+R L
Sbjct: 256 -------TGIISYTTGKYMLLDSSTRRNLELCETLREKQKRGSLLWVLDKTKTAMGARTL 308
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
R +V PL ++ I ARLDAV E+ D I + L+
Sbjct: 309 RSYVEQPLINKEDILARLDAVGEL--------------------KDNAIAREEIREYLTP 348
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
V D++R I++I +++A P + A Q+ L ++ + D +TS L
Sbjct: 349 VY-------DLERLISKITYQSANPRDLTA-FQSSLAMLPHIKYILSD------MTSPLL 394
Query: 565 HSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVARAR 620
S L + L + +L+ + KE A +G II +G +EV + R
Sbjct: 395 MS-LYREL-------DTLEDLCELVQSAIKEEPPLAMKEGG-----IIKDGYDAEVDKLR 441
Query: 621 KAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKK 678
A K L L R++ G++NL+ + +E+ ++K VP + + +
Sbjct: 442 NAKTEGKTWLAELEAEEREKTGIKNLKIKYNKVFGYYLEVTNSYKELVPDYYTRKQTLAN 501
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
RY P + D + A ++L + + + Q +A+A +D +
Sbjct: 502 AERYIIPRLKELEDTILGAEDKLYALEYEIYCKIRDKIADEVVRIQKTAKAIAKIDVFAS 561
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQII 797
LA ++ N+VRP +E I I +GRHPV++ ++ D F+ NDT L ++ II
Sbjct: 562 LALVAERNNYVRPKI---NEKGVIDIKNGRHPVVEKMIPNDMFIANDTLLDDKKNRVSII 618
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS Y+RQ ALI +MAQ+G+FVPA SA + ++D I+TR+GASD + G+STF+
Sbjct: 619 TGPNMAGKSTYMRQTALIVLMAQIGTFVPAESANVGIVDRIFTRVGASDDLASGQSTFMV 678
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFVTHYP 915
E+ E + ILRN T +SL+I+DE+GRGTST DG++IA+A ++++ K LF THY
Sbjct: 679 EMTEVANILRNATNRSLLILDEIGRGTSTFDGLSIAWAVVEHISNAKLLGAKTLFATHYH 738
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ +++ K SV Y ++ + K D D+ +L K+V G ++ S+G +VA+L
Sbjct: 739 ELTELEGKI-DSVNNYCIA----------VKEKGD-DIVFLRKIVKGGADKSYGIQVAKL 786
Query: 976 AQLPPSCISRATVIAAKL-EAEVSSRVQNRSAKRDLLVKLSDQEQEAQ 1022
A +P S I RA I ++L EA++++RV++ +K+ QE +A+
Sbjct: 787 AGVPESVILRAKEIVSELSEADITTRVKD--------IKIQGQESKAR 826
>gi|304383777|ref|ZP_07366236.1| DNA mismatch repair protein MutS [Prevotella marshii DSM 16973]
gi|304335301|gb|EFM01572.1| DNA mismatch repair protein MutS [Prevotella marshii DSM 16973]
Length = 874
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 253/947 (26%), Positives = 440/947 (46%), Gaps = 151/947 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN---- 139
T +K TP+ +Q +LK K+PD L++ G + + EDA AAK+LGI +N
Sbjct: 3 TKDKGLTPMMKQFFDLKAKHPDALMLFRCGDFYETYAEDAVAAAKILGITLTKRNNGGNR 62
Query: 140 --FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKA 197
A P L+ ++ +L+ AG +V + Q E + RG++ L T
Sbjct: 63 EDTEMAGFPHHALDTYLPKLIRAGRRVAICDQLEDPKLTK------TLVKRGITELVTPG 116
Query: 198 TLEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
V G++ E+N+L + + GK GV ++ISTG+
Sbjct: 117 -------VAMGDNVLNYKENNFLAAI-----HFGK-----------TACGVAFLDISTGE 153
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDC 316
+ GE ++ E +L + +P E+L +K+ + ++G +R C
Sbjct: 154 FLTGEGTIDYV----EKLLGNFAPKEILY----NKERKSDFARFSG----------TRYC 195
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
M E ++ + + G G+ ++ + + A +
Sbjct: 196 TF-------------EMDEWVFTDQNSRQKLLKHFGTKNLKGFGVEHL-NSGIIASGAIL 241
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
++L+Q I + S + + L T++ LE++ ++ E +L+ I++ T+
Sbjct: 242 QYLEQTQHTHIAHI-TSLARIEEDRYVRLDKFTIRSLELVAPMND--EGASLIDIIDKTV 298
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G R+L+RWV PL D I+ RL V + +P
Sbjct: 299 TPMGGRMLKRWVVFPLKDEKPINERLGIV------------------------EYYFKKP 334
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI-LYAGKQLQQLHIDGEY 555
F L +G D++R +++ +P E + + A+ A + L+ + E
Sbjct: 335 DFRQCLDEQFHRMG---DLERIVSKAAVGRVSPREVVQLKNALQALAPVKTACLYAENEN 391
Query: 556 REKVTSK-TLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
++ + L ++ +R+ + P ++ K +I++G
Sbjct: 392 LRRIGERMNLCESIRERIEREICTDPPQLVSKGG--------------------VIADGV 431
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQ---LGMRNLEFMSVSGITHLIELPANFK--VP 667
SE+ R+ S K D L+ + R++ G+ +L+ + + +E+ +K VP
Sbjct: 432 NSELDELRRIAYSGK---DYLLEIQRREAEATGIASLKIGYNNVFGYYLEVRNTYKENVP 488
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+W + + RY + E+ +++ A +++ + + + + + Q
Sbjct: 489 TDWVRKQTLANAERYITQELKEYEEKILGAEQKILSLEDRLFADLVTAMQEFIPQIQIDA 548
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDT 785
+A LDCL A A +S ++ P VDD + + I GRHPV++T L + +VPND
Sbjct: 549 NLIAHLDCLLAFAKVSEENRYIMPS-VDDSDVIDIR--QGRHPVIETQLPLGEKYVPNDI 605
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L +ER+ IITGPNM GKS +RQ ALI ++AQ+G FVPA SA + ++D I+TR+GAS
Sbjct: 606 FLDSERQQIMIITGPNMAGKSALLRQTALIVLLAQIGCFVPAESARIGLVDKIFTRVGAS 665
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK- 904
D++ G STF+ E+ EA+ IL N + +SLV+ DELGRGTST+DG++IA+A ++YL E++
Sbjct: 666 DNLSLGESTFMVEMTEAANILNNVSPRSLVLFDELGRGTSTYDGISIAWAIVEYLHENER 725
Query: 905 -KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K LF THY ++ +++ F + Y+VS + D V +L + G
Sbjct: 726 AKARTLFATHYHELNEMEKNF-ARIKNYNVSV-----------KELDDKVIFLRTLAKGG 773
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS--RVQNRSAKR 1008
SE SFG VAQ+A +P S + RA VI +LE++ S+ V+ SA+R
Sbjct: 774 SEHSFGIHVAQIAGMPKSIVKRANVILKQLESDNSNVGTVEKPSAER 820
>gi|114566506|ref|YP_753660.1| DNA mismatch repair protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122318429|sp|Q0AYB5.1|MUTS_SYNWW RecName: Full=DNA mismatch repair protein MutS
gi|114337441|gb|ABI68289.1| DNA mismatch repair protein MutS [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 859
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 256/926 (27%), Positives = 427/926 (46%), Gaps = 132/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTP+ QQ +++K + D +L +G + F EDA +A++ L I + IP
Sbjct: 4 YTPMMQQYLQIKEEQQDAILFFRLGDFYEMFFEDARIASRELEIVLTARDGGAGSKIPMC 63
Query: 149 RLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAA 202
+ H + RL+N G+KV + +Q E P +A G R ++ + T T+
Sbjct: 64 GVPYHSVDNYLARLINRGYKVAICEQVED-------PREAKGIVKREVTRIVTPGTIIEE 116
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ + ++ N+L V ++ + G+ ++ISTG+ E
Sbjct: 117 QLLDQAKN------NFLAAVEEEP----------------LCTGIAYIDISTGEFWLSEI 154
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
RS +E+ +L +SPAE LLA +G + E R I
Sbjct: 155 AGENARSRVESEILRISPAE-------------CLLAGSGSLTGSWEEEWLRQQNITLTV 201
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
E+ E L + +++ ++ + I+ + + +++H+K
Sbjct: 202 WDELPLSLERAESLLLRQLQVASLESFGLKSYSAGIKAAARIIAFLEETQKTSLQHIK-- 259
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
S R S + + + + LE+ G G+LL I++ + T G R
Sbjct: 260 ----------SLRCYSSDNFLEMDFYSRRNLELTATLREGKREGSLLSILDESRTAMGKR 309
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LLRRW+ PL + I RLDAV E+ ++ S RT L
Sbjct: 310 LLRRWIEQPLREAGEIEERLDAVDELKNTL-SLRTE-----------------------L 345
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
+ +L+ R D++R +I A+P + + + ++ + L +
Sbjct: 346 TPLLS---RINDLERLGGKIGASVASPRDLLGLKSSLAVINDIKKAL------------Q 390
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA---ADQGDLLNLMIISNGQFSEVARA 619
S +L+RL A+ A+ A + +++N EA +G+L I G E+
Sbjct: 391 PCRSEILQRL---AAMDALEEVFALIDASINDEAPLGIKEGEL-----IKTGYKQEIDEL 442
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFKV-PLNWAKVNS 675
R+ Q L N +++ G++NL+ F V G + IE+ +N + P ++ + +
Sbjct: 443 RELSQEGSNWLVEFENREKQRTGIKNLKVGFNKVFG--YYIEITKSNLSLAPADYHRKQT 500
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
+ R+ S E+ +++ + E L + + + Y A+A LD
Sbjct: 501 LVNSERFISDELKQYEEKILGSRERLYSLEYQEFIKIREALIPYLPRVMETAHAIAILDV 560
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYC 794
L LA ++ N++RP +D+ +I I +GRHPV++ L + FVPND L ++
Sbjct: 561 LQGLAEVAYQNNYIRPE-IDNSG--KIRIRAGRHPVVEKALREARFVPNDLQLDRDKARF 617
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNMGGKS ++RQ AL+ +MAQ+GSF+PA A + ++D I+TR+GASD + G+ST
Sbjct: 618 AIITGPNMGGKSTFMRQAALLVLMAQMGSFIPAEEARIGLVDKIFTRVGASDDLAAGQST 677
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ E + IL N + SLVI+DE+GRGTST+DG++IA A +YLLE+ + VLF THY
Sbjct: 678 FMVEMIEVANILNNASDNSLVILDEIGRGTSTYDGLSIAQAVSEYLLENSRSKVLFATHY 737
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + K G + VS ++ V +L KV+PG ++ S+G VA+
Sbjct: 738 HQLTRLAEKLPGII-NLSVSV-----------KETGNTVVFLKKVLPGKADKSYGLHVAR 785
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA LP I RA I LE SR
Sbjct: 786 LAGLPEKLIIRAEDILQGLEKNKDSR 811
>gi|431808256|ref|YP_007235154.1| DNA mismatch repair protein MutS [Brachyspira pilosicoli P43/6/78]
gi|430781615|gb|AGA66899.1| DNA mismatch repair protein MutS [Brachyspira pilosicoli P43/6/78]
Length = 896
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 250/948 (26%), Positives = 455/948 (47%), Gaps = 134/948 (14%)
Query: 71 HTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL 130
T + S + +K TP+ +Q E+K KY D +L+ +G + F EDA++ +++L
Sbjct: 3 ETFFSLEESSENSPKEEKLTPMMRQYKEIKDKYSDSILLFRMGDFYEVFFEDAKIVSELL 62
Query: 131 GIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRG 189
G+ N A +P ++ ++ +LV +G K+ + Q E P A G R
Sbjct: 63 GLTLTKRANVPMAGVPYHAIDNYLSKLVKSGKKIAICDQME-------DPKTAKGIVKRD 115
Query: 190 LSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
++ + T T+ + + + NYL ++ V K N V +
Sbjct: 116 VTQVITPGTIAENKYLESKSN------NYLASII-----VSKSENNV---------AIAI 155
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAV---LLSLSPAELLLGQPLSKQTEKMLLAYAGPASN 306
+ISTG++ EF + + L+ + ++ SP E++ + S + K++ SN
Sbjct: 156 CDISTGELYVTEFENNNTKDFLDEICEEIIRFSPKEIMTVE--SVKESKIIKEIQNRFSN 213
Query: 307 VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
+ A + + ++ + + ED+++ V G
Sbjct: 214 IFFSTTPNYTAEYSYAYKLLTNHFKTISLKSFGI-EDKHLIVSLLG-------------- 258
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
+L ++ L + LE I + R S MTL T+ LE+L N +
Sbjct: 259 ----SLIYYLQELSKTSLEHISNIKLYNRKDS----MTLDYATISSLEILETIRNDNNKM 310
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
TL ++ T T G+R L+R + PL D + I+ RL+ V ++
Sbjct: 311 TLFDTIDKTKTSMGARYLKRIIVEPLLDIDEINKRLNNV-----------------EYFY 353
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
KN +F Y + +L+ +G DI+R +++ P E +++ + + + + +
Sbjct: 354 KNQ-------KFMYRIMDMLSDVG---DIERLASKLALGRINPKELVSLKRFLFSSLQII 403
Query: 547 QQL---HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+L + + E++ + + L++R IL P ++ ++GD
Sbjct: 404 TELVLNNFNDVNFEEIGDIKIITDLIERAIL--EDPKIV--------------LNEGD-- 445
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PA 662
II + ++ + +A + + + L N + + NL+ + I + IE+ +
Sbjct: 446 ---IIKDDYDEKLKKYNEARREGRTWISELENEYKSITSINNLKIRYNNVIGYYIEITKS 502
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGG 718
N VP ++ K + + RY + +++ + ANE+ + +D F++ +
Sbjct: 503 NISLVPKDFIKRQTLVGSERYTTSKLMEYEKTINEANEKSYAL---EYDIFIEVRNKVNE 559
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL- 777
Y + ++ +D +LA L+ +N+ +P+ + I I GRHPV++ L
Sbjct: 560 YLTSILKMAKIISVIDVYASLACLAAEENYTKPI---ITDDGIIDIKEGRHPVVEANLKN 616
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
++F+ NDT L + E+ IITGPNM GKS Y+RQ ALI ++AQ+GSFVPA SA++ ++D
Sbjct: 617 ESFIANDTYLDNKNEHLLIITGPNMSGKSTYLRQTALIVLLAQIGSFVPAKSAKISIVDR 676
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GASD+I +G STFL E+NE +YIL +CT +SLVI+DE+GRGTST+DG++IA+A +
Sbjct: 677 IFTRVGASDNIAKGESTFLVEMNETAYILNHCTDRSLVIMDEIGRGTSTYDGLSIAWAIV 736
Query: 898 DYLL--EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
+YL+ E+KK LF THY ++ ++ + + ++KV+ ++ D+ + +
Sbjct: 737 EYLVNEENKKSKTLFATHYHELTMLE----------DLEGVKNYKVL--VEEYKDE-IIF 783
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+ KV+ G +ESS+G A++A P I RA+ I KLE E +V+N
Sbjct: 784 MKKVIEGAAESSYGIYAAKIAGAPHKVIQRASEILKKLENEAGIQVEN 831
>gi|429745835|ref|ZP_19279221.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429167745|gb|EKY09633.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 380
str. F0488]
Length = 860
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 266/947 (28%), Positives = 420/947 (44%), Gaps = 192/947 (20%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----A 143
K TPL +Q ++K+KYPD LL+ VG + FGEDA AA L I +N A
Sbjct: 3 KETPLMKQYNQIKSKYPDALLLFRVGDFYETFGEDAVKAAHTLDIVLTNRNNGTERSELA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
P +N ++ +LV AG++V + Q E + G RG++ L T
Sbjct: 63 GFPYHSINTYLPKLVKAGYRVAICDQLEDPKLVK------GIVKRGVTELVTPG------ 110
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
V +D +SN + V +GK G +++STG+ + + +
Sbjct: 111 -VALNDDILQSKSNNFLASV----WLGK-----------QSCGAAFLDVSTGEFLVAQGD 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ + +L + P+ELL+ + K+
Sbjct: 155 KTYI----DKLLQNFRPSELLVAKHQKKE------------------------------- 179
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRHLKQ 381
E+ G+D H +E + D A Q L LK
Sbjct: 180 -----FAEHFGDDF----------------HCFYLEDWVFKDDYAQQVLTKHFQTNSLKG 218
Query: 382 FGL----ERIMCLGASFRSLSGSME-----------------MTLSANTLQQLEVLRNNS 420
FG+ E I+ GA LS + + L T++ LE+ N+
Sbjct: 219 FGVDELTEAILTAGAILYYLSETQHHQLQHITAIQRIAEEAYVWLDKFTIRNLELYAGNT 278
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
S +LL +++ TL+ GSR L+RW+ PL +LD + R
Sbjct: 279 TPS--VSLLDVIDKTLSPMGSRTLKRWLALPL-------KKLDKI----------RQRHE 319
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
V + K+ DV L V T+L R DI+R I+++ P E +
Sbjct: 320 VVDYFLKHIDV----------LEQVKTALSRMGDIERLISKVATLKINPREVV------- 362
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL-----LSTVNKE 595
QL E H L+K+L L +++ ++ KL LS E
Sbjct: 363 -------QLRASLE----------HIPLIKQLCLASANESLTLLGDKLHSCEQLSARIAE 405
Query: 596 AADQGDLLNLM---IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
+ +N+ I+ G +E+ R S K LD L+ ++ G+ +L+ S +
Sbjct: 406 TLSEDAPVNIAKGNAIAKGFSAELDELRGLSHSGKSYLDDLLLRESQRTGIPSLKIDSNN 465
Query: 653 GITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ IE+ K VP +W + + RY + E+ ++ A E++ + ++ +
Sbjct: 466 VFGYYIEVRNTHKDKVPADWIRKQTLVNAERYITGELKEYEAKILGAEEKIAQLEQSLYA 525
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+ Y + Q + LDCL ATL+ N+ RP + +E I I GRHP
Sbjct: 526 ELIAFISEYIGQVQTNATLIGQLDCLCGFATLAMENNYHRP---EMNEGYAIEIKDGRHP 582
Query: 771 VLDTILLDN--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
V++ L ++ ND L ER+ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA+
Sbjct: 583 VIEKQLPVGTPYIANDVYLDRERQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPAA 642
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SA+L ++D I+TR+GASD+I G STF+ E+NEA+ IL N + +SLV++DE+GRGTST+D
Sbjct: 643 SAQLGIVDKIFTRVGASDNISMGESTFMVEMNEAALILNNISDRSLVLLDEIGRGTSTYD 702
Query: 889 GVAIAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
G++IA+A +YL EH K LF THY ++ ++ +F + Y+VS
Sbjct: 703 GISIAWAIAEYLHEHPSKAKTLFATHYHELNEMSEQFE-RIKNYNVSV-----------K 750
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V +L K+ G S SFG VA++A +P I +A + KLE
Sbjct: 751 ETKDSVLFLRKLTEGGSAHSFGIHVAKMAGMPQYVIQKANKMLKKLE 797
>gi|404474771|ref|YP_006706202.1| DNA mismatch repair protein MutS [Brachyspira pilosicoli B2904]
gi|404436260|gb|AFR69454.1| DNA mismatch repair protein MutS [Brachyspira pilosicoli B2904]
Length = 896
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 248/939 (26%), Positives = 452/939 (48%), Gaps = 134/939 (14%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S +K TP+ +Q E+K KY D +L+ +G + F EDA++ +++LG+ N
Sbjct: 12 SENLNKEEKLTPMMRQYKEIKNKYSDSILLFRMGDFYEVFFEDAKIVSELLGLTLTKRAN 71
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKAT 198
A +P ++ ++ +LV +G K+ + Q E P A G R ++ + T T
Sbjct: 72 VPMAGVPYHAIDNYLSKLVKSGKKIAICDQME-------DPKTAKGIVKRDVTQVITPGT 124
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ + + + NYL ++ V K N V + +ISTG++
Sbjct: 125 IAENKYLESKSN------NYLASII-----VSKSENNV---------AIAICDISTGELY 164
Query: 259 YGEFNDGFLRSGLEAV---LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRD 315
EF + + L+ + ++ SP E++ + + + K++ SN+
Sbjct: 165 VTEFENNNTKDFLDEICEEIIRFSPKEIMTVESVKES--KIIKEIQNRFSNIFFSTTPNY 222
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
A + + ++ + + ED+++ V G +L
Sbjct: 223 TAEYSYAYKLLTNHFKTISLKSFGI-EDKHLIVSLLG------------------SLIYY 263
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
++ L + LE I + R S MTL T+ LE+L N + TL ++ T
Sbjct: 264 LQELSKTSLEHISNIKLYNRKDS----MTLDYATISSLEILETIRNDNNKMTLFDTIDKT 319
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G+R L+R + PL D + I+ RL+ V ++ KN
Sbjct: 320 KTSMGARYLKRIIVEPLLDIDEINKRLNNV-----------------EYFYKNQ------ 356
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL---HID 552
+F Y + +L+ +G DI+R +++ P E +++ + + + + + +L + +
Sbjct: 357 -KFMYRIMDMLSDVG---DIERLASKLALGRINPKELVSLKRFLFSSLQIITELVLNNFN 412
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
E++ + + L++R IL P ++ ++GD II +
Sbjct: 413 DVNFEEIGDIKIITDLIERAIL--EDPKIV--------------LNEGD-----IIKDDY 451
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNW 670
++ + +A + + + L N + + NL+ + I + IE+ +N VP ++
Sbjct: 452 DEKLKKYNEARREGRTWISELENEYKSITSINNLKIRYNNVIGYYIEITKSNISLVPKDF 511
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGGYYAEFQAAV 727
K + + RY + +++ + ANE+ + +D F++ + Y
Sbjct: 512 IKRQTLVGSERYTTSKLMEYEKTINEANEKSYAL---EYDIFIEVRNKVNEYLTSILKMA 568
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTN 786
+ ++ +D +LA L+ +N+ +P+ + I I GRHPV++ L ++F+ NDT
Sbjct: 569 KIISVIDVYASLACLAAEENYTKPI---ITDDGIIDIKEGRHPVVEANLKNESFIANDTY 625
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L + E+ IITGPNM GKS Y+RQ ALI ++AQ+GSFVPA SA++ ++D I+TR+GASD
Sbjct: 626 LDNKNEHLLIITGPNMSGKSTYLRQTALIVLLAQIGSFVPAKSAKISIVDRIFTRVGASD 685
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL--EHK 904
+I +G STFL E+NE +YIL +CT +SLVI+DE+GRGTST+DG++IA+A ++YL+ E+K
Sbjct: 686 NIAKGESTFLVEMNETAYILNHCTDRSLVIMDEIGRGTSTYDGLSIAWAIVEYLVNEENK 745
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
K LF THY ++ ++ + + ++KV+ ++ D+ + ++ KV+ G +
Sbjct: 746 KSKTLFATHYHELTMLE----------DLEGVKNYKVL--VEEYKDE-IIFMKKVIEGAA 792
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
ESS+G A++A P I RA+ I KLE E +V+N
Sbjct: 793 ESSYGIYAAKIAGAPHKVIQRASEILKKLENEAGIQVEN 831
>gi|220932004|ref|YP_002508912.1| DNA mismatch repair protein MutS [Halothermothrix orenii H 168]
gi|254766630|sp|B8CX98.1|MUTS_HALOH RecName: Full=DNA mismatch repair protein MutS
gi|219993314|gb|ACL69917.1| DNA mismatch repair protein MutS [Halothermothrix orenii H 168]
Length = 896
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 264/936 (28%), Positives = 431/936 (46%), Gaps = 165/936 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMT 142
K TP+ QQ +K KY D +L +G + F +DA++AA+ L + +
Sbjct: 3 KLTPMMQQYQSIKNKYKDAILFFRLGDFYEMFNDDAKIAARELDLALTARNKGGGEKAPM 62
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
A +P ++ +L+ G+KV + +Q E P +A G R + + T T+
Sbjct: 63 AGVPCHSAESYIAKLLEKGYKVAICEQIE-------DPSEAKGLVSREVVRIITPGTIIE 115
Query: 202 AEDVGGGEDGCGGESNYL---VCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E + E+ NYL +C D LG V+ISTG+
Sbjct: 116 NEMLKDKEN------NYLASAICYKD-------------------HLGFSYVDISTGEFY 150
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSK------QTEKMLLAYAGPASNVRVECA 312
+F+ F + L + P E+++ + L + + ++M Y + R+E
Sbjct: 151 VTQFSQKFSDKVWDE-LDRIQPREVIICKELEETENFADKKKQMNFVY----NYSRIEKV 205
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSN--NEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
A L E+ ++LS ED+ + G E I + D +
Sbjct: 206 K----------AAYNFLLEHFKTNSLSGFGCEDKPAAILAAG------EIINFLKDTQKR 249
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L I + + L M L ++ R ++E+T +R N + G+LL+
Sbjct: 250 TLE-HINRITTYNLTDYMVLDSATRY---NLELT---------STIRGNKHK---GSLLN 293
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++ T+T G RL+++W+ PL DRN I RLDAV E+ +
Sbjct: 294 VLDQTITSMGGRLIKKWINQPLIDRNKIETRLDAVEELVNN------------------- 334
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
Y +L + L D++R + ++ + +A + A+ +IL +L Q+
Sbjct: 335 --------YLLLQEIREHLKGIYDLERILGKVSYGSANARDLAALKYSIL----KLPQIK 382
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE---AADQGDLLNLMI 607
D E K +H +I A L ++ E + +G L
Sbjct: 383 KDLEQLNTKLFKNMHETF----------DPLIDLAGLLDRSIVDEPPVSVREGGL----- 427
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANF 664
I +G SE+ RKA K+ + +L R++ G+ +L+ F V G + IE+ AN
Sbjct: 428 IKDGYSSELDELRKARTEGKDWIANLQKTERERTGISSLKVGFNKVFG--YYIEITKANL 485
Query: 665 -KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE---FGGYY 720
+VP N+ + + + R+ +PE L + L L EE + + F+K
Sbjct: 486 DRVPDNYTRKQTLSNSERFITPE-LKEKEALVLGAEEK--INDLEYKLFVKIRDIVRDNI 542
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
+ ++ LD L +LA + +++ RP +D I I GRHPV++ + F
Sbjct: 543 KRIKKTAAIISKLDVLTSLAQNALERDYNRPRINNDG---VIEIIKGRHPVVEDMGKGAF 599
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPNDT L E E IITGPNM GKS Y+RQVALI +MAQ+GSFVPA A + ++D I+T
Sbjct: 600 VPNDTYLDLEEERFIIITGPNMSGKSTYMRQVALIVLMAQMGSFVPADKATIGIVDRIFT 659
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+GASD + G+STF+ E+NE + I+ N T SL+I+DE+GRGTST+DG++IA+A +Y+
Sbjct: 660 RVGASDDLTTGQSTFMVEMNEVANIVNNATRNSLIILDEVGRGTSTYDGLSIAWAVSEYI 719
Query: 901 LEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
+ LF THY ++ ++ + + Y+V + + + V +L+K
Sbjct: 720 NNPDRIGARTLFATHYHELTQLENR--PGIKNYNV-----------LVEEDEDGVHFLHK 766
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++PG + S+G +VAQLA LP I RA I A+LE
Sbjct: 767 IIPGKASESYGIEVAQLAGLPMEIIIRAQEILAELE 802
>gi|391335569|ref|XP_003742162.1| PREDICTED: DNA mismatch repair protein Msh6-like [Metaseiulus
occidentalis]
Length = 1146
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 271/1030 (26%), Positives = 457/1030 (44%), Gaps = 136/1030 (13%)
Query: 15 PKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLF--PPKTPKKPKLSPHT 72
P+ Q T + + ++P+ TP +A +VS +P++ +S F PK K+
Sbjct: 192 PRRAQRTPAKAPATPK----TPSSSLAQSVSRNPSEWLHLSYEFLKEPKDLSGKKIGDAD 247
Query: 73 LNP--IPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL 130
+P + P+S TP +Q ELK+++ D +L +VG + + DA + + L
Sbjct: 248 YDPSTLHVPNS---FKNSLTPGVRQWWELKSRHFDTVLFFKVGKFYELYHMDAVIGVENL 304
Query: 131 GIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAI---KAHGPGKAGPFG 187
G+ ++ ++ + P L ++ L+ G+K V+QTET ++ + GK+ F
Sbjct: 305 GL-TYMKGDWAHSGFPEVALQRNMEALIQKGYKCARVEQTETPSMMEQRCKTSGKSSKFD 363
Query: 188 RGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGV 247
+ + + + + G D G S+Y + + + R GV
Sbjct: 364 KVVRREICNVSSKGLQLCGA--DAVPG-SSYCLALFSKE----------------RRFGV 404
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG----P 303
V+ + G GEF D S L ++ +P E +L + +S ++++ A P
Sbjct: 405 CLVDSTVGRFHIGEFEDDHQLSSLRTLISRFAPVEAILERSISADVKRIVEAIGAIIDQP 464
Query: 304 ASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
A N + I G + + Y + ++ N D M P G
Sbjct: 465 AKNKFLSAEKALTLIREGDYFK-GNEYPQALKGLIAEN-DPLMSTPRAGC---------- 512
Query: 364 MPDLAVQALALTIRHLKQ-FGLERIMCLGASFRSLSGSME----------MTLSANTLQQ 412
+LAV ALA + L++ LE ++ + F ++ E M + + L
Sbjct: 513 --ELAVAALASIVGRLQEALILEDVLTM-VEFETIEFKFEGGKGDYLPKIMIMDSVALTN 569
Query: 413 LEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESM 472
LE+ NS G+ G+L+ +N T +G R L++W+ P C I +R DAV E+ E+
Sbjct: 570 LEIF-ENSVGTSEGSLISTINFCSTAFGLRHLKKWLLGPSCVSEEIESRWDAVGELMEN- 627
Query: 473 GSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI----FHRTAT 528
+ +L ++ L + PD+ + + RI +T
Sbjct: 628 --------------------------FSLLKTLQERLKKLPDMDKMLARIHSLSLKKTDH 661
Query: 529 PSEFIAVMQAILYAGKQLQQLH--IDGEYREK------VTSKTLHSALLKRLILTASSPA 580
P + +Y+ ++++ +DG +RE V K L S+LL+ L +
Sbjct: 662 PDSRAILYSDDVYSKRKIEDFCNVLDG-FREAQAICKLVRDKDLKSSLLRDLTHLTTEGG 720
Query: 581 VIGKAAKLLSTVNKEAADQGDLLN--LMIISNGQFSEVARARKAVQSAKEELDSLINMCR 638
+ L+ +K A D+ L ++ + G E A++ V K+ LD +
Sbjct: 721 HFPDVKEALNYFDK-AFDKTKALKDGKIVPAPGVDEEFDEAQRRVAEVKDSLDEHLQQQM 779
Query: 639 KQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLAL 696
K G + + + IE+P + K + K RY++ + D++
Sbjct: 780 KHFGTSKISYTGTGRTAYQIEVPESVAGKATEDHTLEGHKKGFKRYYTRRGKSLCDEMIK 839
Query: 697 ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNK--NFVRPVFV 754
A E V + F ++ ++ L+ LDCL +LA N + RP
Sbjct: 840 AEEMRDAVSKDLMRRIFHAFDEKRPLWKKVIECLSNLDCLMSLALYGNNAGGSVCRPKIN 899
Query: 755 DDHEPVQIHICSGRHP-VLDTILLDNFVPNDTNLHA-EREYCQ-----IITGPNMGGKSC 807
+ + I I +G HP +L + D + ND L E C ++TGPNMGGKS
Sbjct: 900 HESQKAIIRIVNGCHPCLLKKLGEDKLIANDFTLGTVEEGRCDGSSVALLTGPNMGGKST 959
Query: 808 YIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILR 867
+RQV L+ +MAQ+G++VPA E ++D I+TR+GASD I G STFL E+ E S + +
Sbjct: 960 LMRQVGLLVVMAQLGAWVPAEEMEFSLVDRIFTRLGASDHITLGESTFLVEMLETSAVFK 1019
Query: 868 NCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTKFTG 926
+ T SLV++DELGRGTST+DG ++AYA L L + + LF THY +A DI+ + G
Sbjct: 1020 HATKHSLVLLDELGRGTSTNDGASLAYAVLAELSKSNR-RTLFSTHYHDLAKDIQGVYLG 1078
Query: 927 SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRA 986
H++ + ++D+DV +LYK VPG E SFGF VA+LA LP ++
Sbjct: 1079 -----HMACVV----------ENDEDVVFLYKFVPGNCEKSFGFNVARLAGLPQRIVTMG 1123
Query: 987 TVIAAKLEAE 996
A +LE +
Sbjct: 1124 LQRAKELEEQ 1133
>gi|423328882|ref|ZP_17306689.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 3837]
gi|404604113|gb|EKB03753.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 3837]
Length = 865
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 257/925 (27%), Positives = 429/925 (46%), Gaps = 147/925 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K TPL +Q ++K KYPD L+ VG + FGEDA A+K+LGI A
Sbjct: 9 KETPLMKQYNDIKAKYPDACLLFRVGDFYETFGEDAVRASKILGITLTKRSAGTASETEL 68
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEA 201
A P +NV++ +LV AG +V + Q E P RG++ L T
Sbjct: 69 AGFPHHSINVYLPKLVKAGLRVAICDQLE-------DPKTTKTIVKRGVTELVTPG---- 117
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V ++ +SN +C + F +G+ +++STG+ + E
Sbjct: 118 ---VALNDEVLHSKSNNFLCAIH------------FAKK---TIGISFLDVSTGEFLTTE 159
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ ++ + +L + +P+E+L+ K + L G N+ + D ++
Sbjct: 160 GDQDYI----DKLLQNFAPSEILV----QKSNKTHFLQNYGTTYNLFL----LDDWVFKT 207
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
A SL + ++L +++ +EG +A A+ + +
Sbjct: 208 DFA-FESLTSHFKTNSLKGFGVEDL-----------VEGT-----IACGAILYYLSETQH 250
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
LE I ++ + ++ + + T++ LE L N++N + TLL +++ TL+ G
Sbjct: 251 TRLEHI----SNIQRIAEDAYVWMDRFTIRNLE-LYNSANLNAI-TLLDVIDKTLSPMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL+RW+ PL D I+ R + V + E NS+ +
Sbjct: 305 RLLKRWLALPLKDTKKITDRHNIVEILKE-----------------NSE----------L 337
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHIDGEYREK 558
L+ T + + D++R I++I +P E I + + AI+ + Q+ D K
Sbjct: 338 LTLFQTQIKKISDLERLISKIATGKVSPRELIYLNDSLDAIIPIKETAQKSSNDSL---K 394
Query: 559 VTSKTLHSA-LLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
TLH LL+ I ++ +P I K I+ G
Sbjct: 395 QMGNTLHGCELLREKIRGTISEDAPVAIAKGNA--------------------IAEGVHP 434
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAK 672
E+ RK S KE L+++ ++ G+ +L+ F +V G + KVP W +
Sbjct: 435 ELDELRKISTSGKELLEAMEIRESEKTGIPSLKISFNNVFGYYIEVRNTHKNKVPTEWIR 494
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ RY + E+ ++ A E++ + ++ F+ Y Q +A
Sbjct: 495 KQTLVNAERYITEELKEYETKILGAEEKIYKLENELFEQFVAWCAQYIKPVQLNANLIAQ 554
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNLHAE 790
LDCL + A + N+VRP+ D +E + I GRHPV++ L + ++ ND L+ +
Sbjct: 555 LDCLSSFAQQALENNYVRPLIDDSYE---LDIKDGRHPVIEKQLAYDTPYITNDVYLNNK 611
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA + +D I+TR+GASD+I
Sbjct: 612 EQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAREVRMGPVDKIFTRVGASDNISM 671
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVL 909
G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL +H K L
Sbjct: 672 GESTFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAIAEYLHQHPGKPKTL 731
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ D+ F G + Y+VS + +V +L K+VPG S SFG
Sbjct: 732 FATHYHELNDMSQNFDG-IKNYNVSV-----------KELKDNVLFLRKLVPGGSAHSFG 779
Query: 970 FKVAQLAQLPPSCISRATVIAAKLE 994
VA++A +P + + RA + +LE
Sbjct: 780 IHVAKMAGMPTTVLKRAEKMLKQLE 804
>gi|221633094|ref|YP_002522319.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
gi|221157200|gb|ACM06327.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
Length = 884
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 272/955 (28%), Positives = 442/955 (46%), Gaps = 164/955 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAHLD----HNFMTAS 144
TP+ +Q +E+K + PD LL+ +G + F +DAE+A+++L I D A
Sbjct: 25 TPIRKQYLEIKRQVPDALLLFRLGDFYELFDDDAEVASRILDIALTSRDLGKGQRVPMAG 84
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP ++ +LV AG++V + Q T P R ++ + T+ T+
Sbjct: 85 IPAHAAEPYIAKLVAAGYRVALCDQIGT-------PDGRNLVERRITRILTRGTITEPAM 137
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF-- 262
+ + Y+ V+ + R G+ ++STG+ E+
Sbjct: 138 LDARRN------TYIAAVLLESS----------------RAGLAYADLSTGEFAATEWVA 175
Query: 263 -NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
LR+ +E LL ++PAEL+L P + + ++ G A E A R+
Sbjct: 176 EQLEELRAAVERELLRIAPAELVL--PAGR---RGVIGVEGAAVTELEERAWREH----- 225
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA-------LAL 374
L+E+ G +TL++ G+ + P A L
Sbjct: 226 --EARRVLHEHFGVETLASF------------------GLADRPAALRAAGALLGYLLDT 265
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNH 434
+ L Q + ++ SF +L A T + LE+L ++ G +L+ +++
Sbjct: 266 QVGQLPQLD-DLVVYQTDSFMTL--------DAVTRRNLELL-ESARGERAHSLVSVLDR 315
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T G+RLLRRW++ PL D I R + V+ + E T+V
Sbjct: 316 TETPMGARLLRRWLSQPLLDVGAIRQRQERVAALVEE--------------------TLV 355
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
+ +L+ V D++R R+ TP E + G L +L E
Sbjct: 356 RARLGILLAGV-------ADLERLANRVLTGHVTPRELRQL-------GHSLARLPEIAE 401
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISN 610
+ SAL P ++ AA+L+ + E + QG +I
Sbjct: 402 IAGRRPELAPLSAL----------PDLL-PAARLIESAIVEDPPPSLGQGH-----VIRA 445
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPL 668
G E+ R+ +SA+E + SL R++ G+R+L+ + IE+ AN VP
Sbjct: 446 GFAPELDELRERARSAREWIASLEQRERERTGIRSLKVGYNKVFGYYIEVSHANRHLVPP 505
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
++ + + RY +PE+ + A E + + + +KE A+ + A Q
Sbjct: 506 DYQRKQTLVGAERYVTPELREFESMVLQAEERIAALEEEVYRRVVKELASCAAQIRRAAQ 565
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNL 787
+A LD ALA ++ ++ +VRPV VD E + I GRHPV++T L FV ND L
Sbjct: 566 LVAELDVYRALAEVAVDRRYVRPV-VD--ESTVLEIRGGRHPVVETTLEAGRFVSNDARL 622
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
E + I+TGPNM GKS ++RQVALI ++AQVGSFVPA A + ++D I+TR+GA D
Sbjct: 623 DTESDQIVILTGPNMAGKSTFLRQVALIVLLAQVGSFVPAEFARIGLVDRIFTRIGAQDD 682
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK-- 905
I G+STF+ E+ E + ILR T +SLV++DE+GRGTST+DG+AIA A ++YL H +
Sbjct: 683 IAAGQSTFMVEMVETASILRQATLRSLVVLDEVGRGTSTYDGLAIARAVVEYLHNHPRLG 742
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVS 964
C LF THY ++ +++ + V Y MD + D V +L++VV G +
Sbjct: 743 CRTLFATHYHELTELE-RVLPRVRNYR------------MDVLEEGDRVVFLHRVVRGGA 789
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEA----EVSSRVQNRSAKRDLLVKLS 1015
+ S+G VAQLA LP + + RA I +LE+ E + R Q+ + + L ++L+
Sbjct: 790 DKSYGIHVAQLAGLPHAVVRRAREILQELESARSGEHTRRRQSMAKEVPLTIQLT 844
>gi|296223907|ref|XP_002807586.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh6-like, partial [Callithrix jacchus]
Length = 1223
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 258/982 (26%), Positives = 438/982 (44%), Gaps = 141/982 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP ++ ++K++ D+++ +VG + + DA + LG+ + N+ + P
Sbjct: 270 TPGMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGL-VFMKGNWAHSGFPEIA 328
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIK-------AHGPGKAGPFGRGLSALYTKATLEAA 202
+ LV G+KV V+QTET + AH R + + TK T +
Sbjct: 329 FGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS 388
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
G D + YL+ + + + + G GV V+ S G G+F
Sbjct: 389 VLEG---DPSENYNKYLLSLKEKEED---------SSGHTRAYGVCFVDTSLGKFFIGQF 436
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+D S ++ P ++L + LSK+T+ +L + + ++ I G
Sbjct: 437 SDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKTIL--------KSSLSSSLQEGLIPGS 488
Query: 322 ALAEVMSLYENMGEDTLSN---NEDQNMDVPEQGNHRSAIEGIMNMPD-----------L 367
+ + E+ ++D + +P+ ++G+++ D L
Sbjct: 489 QFWDASKTLRTLLEEGYFREKLSDDIGVMLPQ------VLKGMISESDSIGLTPREKSEL 542
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFR------------SLSGSM------EMTLSANT 409
A+ AL + +LK+ +++ + A+F + SG++ M L A T
Sbjct: 543 ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDIVSTTRSGAVFTKAYQRMVLDAVT 602
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+ N +NGS GTLL ++ T +G RLL++W+ PLC I+ RLDA+ ++
Sbjct: 603 LNNLEIFLNGTNGSAEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDL- 661
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
+V P+ +S V+ L + PD++R +++I H +P
Sbjct: 662 -----------------------MVVPE---KISEVVELLKKLPDLERLLSKI-HNVGSP 694
Query: 530 -------SEFIAVMQAILYAGKQLQQL-----------HIDGEYREKVTSKTLHSALLKR 571
+ M+ Y+ K++ I G E V S +LK+
Sbjct: 695 LKSQNHPDSRLXCMKXTTYSKKKIIDFLSALXGFKVMCKIIGIMEEVVDG--FKSKILKQ 752
Query: 572 LI-LTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVARARKAVQSA 626
+I L +P G+ L +N+ ++ L+ G S+ +A ++
Sbjct: 753 VISLQTKNPE--GRFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIREN 810
Query: 627 KEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYH 683
++ L + R ++G R + + + + +E+P NF +P + ++ K RY
Sbjct: 811 EQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYW 870
Query: 684 SPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLS 743
+ + L L A E + + F Y ++Q+AV+ +A LD L LA S
Sbjct: 871 TKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYS 930
Query: 744 RNKN--FVRPV-FVDDHEPVQIHICSGRHP-VLDTILLDNFVPNDTNLHAE-------RE 792
R + RPV + + P + + RHP V T D+F+PND + E +
Sbjct: 931 RGGDGPMCRPVILLPEDTPPFLELKGSRHPCVTKTFFGDDFIPNDILIGCEEEEEENGKA 990
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
YC ++TGPNMGGKS +RQ L+ +MAQ+G +VPA L +D ++TR+GASD I G
Sbjct: 991 YCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGE 1050
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF EL+E + IL + TA SLV+VDELGRGT+T DG AIA A + L E KC LF T
Sbjct: 1051 STFFVELSETASILSHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFST 1110
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY + + ++ +V H++ + ++ P S + +T+LYK + G S+GF
Sbjct: 1111 HYHSLVEDYSQNV-AVRLGHMACMVENECEDP----SQETITFLYKFIKGACPKSYGFNA 1165
Query: 973 AQLAQLPPSCISRATVIAAKLE 994
A+LA LP I + A + E
Sbjct: 1166 ARLANLPEEVIQKGHRKAREFE 1187
>gi|325263900|ref|ZP_08130633.1| DNA mismatch repair protein MutS [Clostridium sp. D5]
gi|324030938|gb|EGB92220.1| DNA mismatch repair protein MutS [Clostridium sp. D5]
Length = 883
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 259/942 (27%), Positives = 434/942 (46%), Gaps = 151/942 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMTAS 144
TP+ QQ +E K +YPD +L +G + F EDA E+ + G L+
Sbjct: 5 TPMMQQYMETKKQYPDCILFYRLGDFYEMFFEDAITVSRELEITLTGKSCGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P ++ ++ +LV G+KV + +Q E P +A G R + + T T A +
Sbjct: 65 VPYHAVDNYLNKLVERGYKVAICEQME-------DPKQAKGLVKRDVVRIVTPGTNLAPQ 117
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ ++NYL+C+V D R G+ +I+TGD E
Sbjct: 118 ALD------ETKNNYLMCIV------------YIAD----RYGLSIADITTGDYFVTEIP 155
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D L L P+E++ + + + + + S D + A+
Sbjct: 156 DSM---KLMDELYKFMPSEIICNESFYMSG----MDLDDLRNRLGIAIYSLDAWYFDDAI 208
Query: 324 AEVMSLYENMGEDTLS--NNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT-IRHLK 380
L E+ + + ED + + G + L Q L+ + H+
Sbjct: 209 CR-QKLLEHFHVSSFAGLGLEDYDCGIISAGALLQYL--------LETQKNNLSHLTHIT 259
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ + M L +S R L+ E LR + G+LL +++ T T G
Sbjct: 260 PYTTGKYMMLDSSTR------------RNLELCETLREK---QKRGSLLWVLDKTKTAMG 304
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+R LR++V PL ++ I RLDAV E+ G+ + E + ++ + P +
Sbjct: 305 ARTLRKYVEQPLIEKEEILRRLDAVEELK---GNAISREEIREY---------LTPVY-- 350
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HIDGEYREKV 559
D++R ITRI + +A P + A+ + L+ L H+
Sbjct: 351 -------------DLERLITRITYGSANPRDLTALCSS-------LEMLPHV-------- 382
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKL-----LSTVNKEAADQGDLLNLM---IISNG 611
K ++ SP + G L L T+ K+A L + II +G
Sbjct: 383 ----------KYILEEMQSPLLCGVRDDLDTLEDLCTLIKDAVIDDPPLAMKEGGIIRDG 432
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN 669
EV R A K+ L L R++ G++NL+ + +E+ ++K VP
Sbjct: 433 YSEEVDTLRHAKSDGKQWLAKLEEEEREKSGIKNLKIKYNKVFGYYLEVTNSYKDLVPDY 492
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY +PE+ D + A ++L + + + G Q +A
Sbjct: 493 YTRKQTLANAERYITPELKELEDTILGAEDKLYALEYELYSTVRDTIAGEVERIQKTAKA 552
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLH 788
+AALD ++A ++ N+VRP +E I I GRHPV++ ++ D F+ NDT L
Sbjct: 553 IAALDVFASIALVAERNNYVRPKI---NEKGIIDIKDGRHPVVEKMIPNDMFISNDTYLD 609
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+++ IITGPNM GKS Y+RQ ALI +MAQ+GS+VPAS+A + ++D I+TR+GASD +
Sbjct: 610 DKKQRISIITGPNMAGKSTYMRQAALIVLMAQLGSYVPASNANIGLVDRIFTRVGASDDL 669
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KC 906
G+STF+ E+ E + ILRN T++SL+I+DE+GRGTST DG++IA+A ++Y+ +
Sbjct: 670 ASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVVEYISDTHLLGA 729
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ +++ K +V Y ++ + K D D+ +L K+V G ++
Sbjct: 730 KTLFATHYHELTELEGKIE-NVNNYCIA----------VKEKGD-DIVFLRKIVKGGADK 777
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAE-VSSRVQNRSAK 1007
S+G +VA+LA +P I RA I +L E +++RV + K
Sbjct: 778 SYGIQVAKLAGVPDIVIDRAKEIVEELSDEDITTRVSEIAVK 819
>gi|297621573|ref|YP_003709710.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
gi|297376874|gb|ADI38704.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
Length = 841
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 261/923 (28%), Positives = 417/923 (45%), Gaps = 130/923 (14%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTA 143
T K TP+ Q K K LL +G + F +DA + AK L + A
Sbjct: 2 TSEAKITPMMAQWHACKKKAGTALLFFRMGDFYEAFYDDAIVLAKELELTLTTRQEIPMA 61
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ RLV GF++ V +QT + G R ++ + T TL +
Sbjct: 62 GVPHHTCDTYIDRLVAKGFRIAVAEQT------SDPKTSKGLVERDVTRIVTPGTLVNSS 115
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NY V VG + LG+ ++++T D EF
Sbjct: 116 LLSENAN------NYFASVT----QVGSV------------LGLAFLDLTTADFRVVEFE 153
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L+ L L P+ELL + S + +L+A + N+ + F
Sbjct: 154 S---EQELQGELYRLQPSELLTSKKFSDK-HALLIADLQHSLNLLINTEDDWRF------ 203
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
++ E +S+ + +D + I + L L+I H+
Sbjct: 204 -----EHQITTEFLISHLKVHTLDGFGLKGMAAGINASGALLHYLRDTLNLSIDHIN--- 255
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
+ + S + MTL T LE+ R+ +G+ TLL I++ T T G RL
Sbjct: 256 ---------TISTYSTNEYMTLDRMTQTNLELTRSLQDGTRKHTLLSILDQTCTPMGGRL 306
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
+ +W+ PL I AR DAV E + HD+ +
Sbjct: 307 ILQWLKRPLLCMKTIQARQDAVQSFIERDWT---------HDQLKA-------------- 343
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
SL DI+R + ++ A+P + A+ +I GK I RE + +
Sbjct: 344 ----SLEDVRDIERLMMKVSANYASPKDIAALRHSIEPLGK------IKSLLREPAAASS 393
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
L K+L P +I A L + G+ I G E+ R+
Sbjct: 394 LIQTHEKQL---NPLPELISLIANALVDEPPQKLSDGN-----IFRKGFHQELDEIREIS 445
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAK----VNSTK 677
++K L++ N R++L ++NL+ + IE+ KVP ++ + VN+ +
Sbjct: 446 ANSKSWLNNYQNKLREELDIKNLKVGFNRMFGYYIEVSKGQAGKVPESFERRQTLVNAER 505
Query: 678 ---KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
K ++ + +VLTA ++++ +EL + E Y Q+LA +D
Sbjct: 506 FITKDLKEYEQKVLTAEEKISSIEQEL-------FQQLRTEVTRYADIVIKTAQSLAIID 558
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREY 793
CL ALA +R + RP +D + ++ I GRHPV++ + + + FVPNDT L E
Sbjct: 559 CLQALAEAARLHGYQRPE-IDQSQ--RLEITEGRHPVIEAVNMNEKFVPNDTLLDDENNR 615
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNM GKS YIRQVALI IMAQ+GSFVPA +A + ++D ++TR+GASD + +G+S
Sbjct: 616 LLLITGPNMAGKSTYIRQVALITIMAQIGSFVPAKTAHIGLVDKVFTRIGASDDLSRGQS 675
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL--EHKKCMVLFV 911
TF+ E+ E + IL N T +SLVI+DE+GRGTST+DG++IA++ ++LL E LF
Sbjct: 676 TFMVEMTETANILNNATDRSLVILDEIGRGTSTYDGISIAWSVAEFLLTEEGSTARTLFA 735
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ ++ K G+V Y+V+ +S+ + +L K+V G ++ S+G
Sbjct: 736 THYCELTKLEEKIPGAVN-YNVAV-----------HESEDSIIFLRKIVKGGTDKSYGIH 783
Query: 972 VAQLAQLPPSCISRATVIAAKLE 994
VA+LA LP I RA I LE
Sbjct: 784 VARLAGLPLPVIERAKEILIHLE 806
>gi|337294298|emb|CCB92281.1| DNA mismatch repair protein mutS [Waddlia chondrophila 2032/99]
Length = 842
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 262/923 (28%), Positives = 417/923 (45%), Gaps = 130/923 (14%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTA 143
T K TP+ Q K K LL +G + F +DA + AK L + A
Sbjct: 3 TSEAKITPMMAQWHACKKKAGTALLFFRMGDFYEAFYDDAIVLAKELELTLTTRQEIPMA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ RLV GF++ V +QT + G R ++ + T TL +
Sbjct: 63 GVPHHTCDTYIDRLVAKGFRIAVAEQT------SDPKTSKGLVERDVTRIVTPGTLVNSS 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NY V VG + LG+ ++++T D EF
Sbjct: 117 LLSENAN------NYFASVT----QVGSV------------LGLAFLDLTTADFRVVEFE 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L+ L L P+ELL + S + +L+A + N+ + F
Sbjct: 155 S---EQELQGELYRLQPSELLTSKKFSDK-HALLIADLQHSLNLLINTEDDWRF------ 204
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
++ E +S+ + +D + I + L L+I H+
Sbjct: 205 -----EHQITTEFLISHLKVHTLDGFGLKGMAAGINASGALLHYLRDTLNLSIDHIN--- 256
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
+ + S + MTL T LE+ R+ +G+ TLL I++ T T G RL
Sbjct: 257 ---------TISTYSTNEYMTLDRMTQTNLELTRSLQDGTRKHTLLSILDQTCTPMGGRL 307
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
+ +W+ PL I AR DAV E + HD+ +
Sbjct: 308 ILQWLKRPLLCMKTIQARQDAVQSFIERDWT---------HDQLKA-------------- 344
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
SL DI+R + ++ A+P + A+ +I GK I RE + +
Sbjct: 345 ----SLEDVRDIERLMMKVSANYASPKDIAALRHSIEPLGK------IKSLLREPAAASS 394
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
L K+L P +I A L + G+ I G E+ R+
Sbjct: 395 LIQTHEKQL---NPLPELISLIANALVDEPPQKLSDGN-----IFRKGFHQELDEIREIS 446
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAK----VNSTK 677
++K L++ N R++L ++NL+ + IE+ KVP ++ + VN+ +
Sbjct: 447 ANSKSWLNNYQNKLREELDIKNLKVGFNRMFGYYIEVSKGQAGKVPESFERRQTLVNAER 506
Query: 678 ---KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
K ++ + +VLTA ++++ +EL R E Y Q+LA +D
Sbjct: 507 FITKDLKEYEQKVLTAEEKISSIEQELFQQLRT-------EVTRYADIVIKTAQSLAIID 559
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREY 793
CL ALA +R + RP +D + ++ I GRHPV++ + + + FVPNDT L E
Sbjct: 560 CLQALAEAARLHGYQRPE-IDQSQ--RLEITEGRHPVIEAVNMNEKFVPNDTLLDDENNR 616
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNM GKS YIRQVALI IMAQ+GSFVPA +A + ++D ++TR+GASD + +G+S
Sbjct: 617 LLLITGPNMAGKSTYIRQVALITIMAQIGSFVPAKTAHIGLVDKVFTRIGASDDLSRGQS 676
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL--EHKKCMVLFV 911
TF+ E+ E + IL N T +SLVI+DE+GRGTST+DG++IA++ ++LL E LF
Sbjct: 677 TFMVEMTETANILNNATDRSLVILDEIGRGTSTYDGISIAWSVAEFLLTEEGSTARTLFA 736
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ ++ K G+V Y+V+ +S+ + +L K+V G ++ S+G
Sbjct: 737 THYCELTKLEEKIPGAVN-YNVAV-----------HESEDSIIFLRKIVKGGTDKSYGIH 784
Query: 972 VAQLAQLPPSCISRATVIAAKLE 994
VA+LA LP I RA I LE
Sbjct: 785 VARLAGLPLPVIERAKEILIHLE 807
>gi|293400026|ref|ZP_06644172.1| DNA mismatch repair protein MutS [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306426|gb|EFE47669.1| DNA mismatch repair protein MutS [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 843
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 245/924 (26%), Positives = 421/924 (45%), Gaps = 149/924 (16%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDH 138
T YTP+ Q +ELK K+ D ++ +G + F +DA++A++ L G A ++
Sbjct: 2 TKKNTYTPMMTQYLELKEKHKDEIIFYRLGDFYEMFFDDAKIASQELDLVLTGKNAGVEE 61
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
IP N +++RL+ G+KV +V+Q E A G R + + T T
Sbjct: 62 RVPMCGIPHHAANGYIQRLIQKGYKVAIVEQMENPA------TAKGLVKRDILKIVTPGT 115
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ D E + V D G L VV E++TG++
Sbjct: 116 IM---------DEVNDEKATVYIVSLHDYQFG--------------LAVVLCEMTTGEMR 152
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ + ++ VLL + AE+++ + K+ KM +E R I
Sbjct: 153 AQLIDKQVM--AIQKVLLGNNVAEIVIEEKFDKKIVKM------------IEDMDR-ITI 197
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
A + YE++ +S+ ED + R A + N D + + H
Sbjct: 198 SYYQDAAIKEAYEHL----ISDIEDDRI--------RHAFGILTNYLDETQRRNMAHLNH 245
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
++Q F + + NT Q LE+ + N S+ TL ++ +
Sbjct: 246 VEQ-------VYENEF--------LQMDYNTKQNLELTASIRNNSKSLTLWSFLDKCRSS 290
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
GSRLL++W+ +PL D +I+ RLDA+ + ++ + T + + +H
Sbjct: 291 MGSRLLKKWIEYPLVDTKMINKRLDAIEYLNDN---FITKDELKEH-------------- 333
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
LS V D++R R+ + +A P + + +++ + +A Y E
Sbjct: 334 ---LSFVY-------DMERLSARVAYGSANPRDILRLIKTLEHAPMIFDLFKDCNAYSEF 383
Query: 559 VT---SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
T + L+ + ++ +P V K D G + G E
Sbjct: 384 QTIDVCQELYEVIDGAIV---ENPPVTLK-------------DGG------VFVEGYHEE 421
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP----ANFKVPLNWA 671
+ + RK ++ K + +L N R++ G+++L+ + IE+ + K +
Sbjct: 422 LDQVRKIGKNGKNWILALENKERERTGVKSLKIGYNRVFGYYIEVTKTNLSQIKEEFGYV 481
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + R+ + E+ D + A E + +++ L + Y + AL+
Sbjct: 482 RKQTLANAERFITQELKEQEDAIVHAQERSIRLENELFENLLDKIRVYLPKLHDLAIALS 541
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAE 790
+D L+ALA +S + RP F +H +++ RHP+LD I+ +V ND + +
Sbjct: 542 TIDALYALAEISSENGYTRPHFHKEH---TVYMEEARHPILDKIMKTTRYVSNDLKMQED 598
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
++ IITGPNMGGKS Y+RQ AL+ IMAQ+G +VPA AEL + D I+TR+GASD I
Sbjct: 599 QD-IMIITGPNMGGKSTYMRQTALLVIMAQIGCYVPARKAELPIFDQIFTRIGASDDIMS 657
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ E+ EA+ L++ +A SL++ DE+GRGTST+DG+A+A A ++Y+L + K LF
Sbjct: 658 GQSTFMVEMMEANNALKHASANSLILFDEIGRGTSTYDGMALAQAMIEYILRNIKAKTLF 717
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ ++ + G + HV + D+ VT+LY+V+ G ++ S+G
Sbjct: 718 STHYHELTQMEERNPGILNV-HVDV-----------HEEDEKVTFLYRVIEGKADKSYGI 765
Query: 971 KVAQLAQLPPSCISRATVIAAKLE 994
VA+LA LP S + RA I LE
Sbjct: 766 NVARLAHLPGSVLDRAQQILDNLE 789
>gi|358054512|dbj|GAA99438.1| hypothetical protein E5Q_06137 [Mixia osmundae IAM 14324]
Length = 1242
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 257/937 (27%), Positives = 409/937 (43%), Gaps = 102/937 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
T EQQ E+K + D +L + G + + DA + G+ +P
Sbjct: 353 TQFEQQFWEIKKNHFDTVLFFQKGKFYELYENDARIGHSEFGLKLTDRVKMCMVGVPEAT 412
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA--EDVGG 207
+ + + G+KVG V Q ETA G + K+ E A + +
Sbjct: 413 FDFWAAKFLAQGYKVGRVDQAETA------------IGMEMRHKDAKSAGEKASSKKIVQ 460
Query: 208 GEDGCGGESNYLVC--VVDDD--GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
E C S +V ++ DD + IR + G+ ++ ST + F
Sbjct: 461 RELNCVLTSGTIVDERMLSDDLSQHCIAIREYTPSSSARPQFGLCVLDASTAEFRIIAFA 520
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D R+ LE L L P EL+ + Q +L P + D G G +
Sbjct: 521 DDICRTKLETTLRLLRPRELVHERVNLSQATTRILRNVLPLQCTWNALKAADFADGKGDI 580
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
+ + N VP + I I + + A+ AL I +L+
Sbjct: 581 HRIFAAV--------------NRAVP------APITQIYDN-EQAMSALGGLIAYLRSLN 619
Query: 384 LERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
L++ + +F+ + M L TL LEVL+N+ GSE GTL+ +++ +T +G
Sbjct: 620 LDKDLVTTGNFQLFDPVRSGERMVLDGQTLAHLEVLQNSQGGSE-GTLISLLSRCVTPFG 678
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+R+L+ WV PL + I+ARL+ V+ + E T E +
Sbjct: 679 TRMLKGWVCQPLRAASAINARLEIVACLIEHADFANTFEKATKT---------------- 722
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
PD++R I+RI T +F V+ + L +L
Sbjct: 723 -----------MPDLERLISRIHAGTIKTKDFDRVVTCFEQIDRLLGRLG--------SI 763
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
+KTL +A L + I AS+P ++ KL E + +L+ L +G +
Sbjct: 764 AKTLPAAGLAQTI--ASAPDLVPLVEKLRGLFQVE---EHELVPL----SGADTLYDDCV 814
Query: 621 KAVQSAKEELDSLINMCRKQLGMRNLEFMSV-SGITHLIELPANFKVPLNWAKVNSTKKT 679
AV + +++L ++ R+ L +L F + + + +++P KVP NW +++ TK
Sbjct: 815 DAVVAIEKDLYDCLSQYRRNLKSNDLTFKDIGTKEIYQVQVPVKIKVPSNWTQMSKTKDW 874
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY+SPEV + QL A E + F +Y + AV+ +A +DCL +L
Sbjct: 875 HRYYSPEVEKLVRQLKEARERRNAAIKQFKGRLCAAFDQHYDIWLQAVKLIAEIDCLLSL 934
Query: 740 ATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQII 797
A S + RPV VD + + + RHP + D F+PND L A + ++
Sbjct: 935 AKSSAALGEPSCRPVIVD-SDRASVDFENLRHPCIFASTPD-FIPNDVQLGASAKSTMLV 992
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TG N GKS +R VA+ IMAQ+G FVPAS+A+L +D I TRMGA D I STF
Sbjct: 993 TGANASGKSTLLRSVAIATIMAQIGCFVPASAAKLSPVDTILTRMGAQDQIYANASTFKV 1052
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
E+++ IL + + SLVI+DELGRGT + DG AIA+ATL L C+ F TH
Sbjct: 1053 EMDDTKKILSDASMSSLVILDELGRGTESGDGYAIAFATLHALATRNNCIGFFATH---- 1108
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
FT V + M + + ++VT+LY++V G + S+G VA++A
Sbjct: 1109 ------FTSLVSDFAYHTQIRPCCMATEMNDNTREVTFLYRLVDGATTKSYGPNVAKMAG 1162
Query: 978 LPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKL 1014
+P + RA I+++ E + R ++ DL + L
Sbjct: 1163 IPSDLVERAIAISSQFEVQTKQREASKRKSEDLPLTL 1199
>gi|423133284|ref|ZP_17120931.1| DNA mismatch repair protein mutS [Myroides odoratimimus CIP 101113]
gi|371649340|gb|EHO14821.1| DNA mismatch repair protein mutS [Myroides odoratimimus CIP 101113]
Length = 865
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 257/925 (27%), Positives = 429/925 (46%), Gaps = 147/925 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K TPL +Q ++K KYPD L+ VG + FGEDA A+K+LGI A
Sbjct: 9 KETPLMKQYNDIKAKYPDACLLFRVGDFYETFGEDAVRASKILGITLTKRSAGTASETEL 68
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEA 201
A P +NV++ +LV AG +V + Q E P RG++ L T
Sbjct: 69 AGFPHHSINVYLPKLVKAGLRVAICDQLE-------DPKTTKTIVKRGVTELVTPG---- 117
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V ++ +SN +C + F +G+ +++STG+ + E
Sbjct: 118 ---VALNDEVLHSKSNNFLCAIH------------FAKK---TIGISFLDVSTGEFLTTE 159
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ ++ + +L + +P+E+L+ K + L G N+ + D ++
Sbjct: 160 GDQDYI----DKLLQNFAPSEILV----QKSNKTHFLQNYGTTYNLFL----LDDWVFKT 207
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
A SL + ++L +++ +EG +A A+ + +
Sbjct: 208 DFA-FESLTTHFKTNSLKGFGVEDL-----------VEGT-----IACGAILYYLSETQH 250
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
LE I ++ + ++ + + T++ LE L N++N + TLL +++ TL+ G
Sbjct: 251 TRLEHI----SNIQRIAEDAYVWMDRFTIRNLE-LYNSANLNAI-TLLDVIDKTLSPMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL+RW+ PL D I+ R + V + E NS+ +
Sbjct: 305 RLLKRWLALPLKDTKKITDRHNIVEILKE-----------------NSE----------L 337
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHIDGEYREK 558
L+ T + + D++R I++I +P E I + + AI+ + Q+ D K
Sbjct: 338 LTLFQTQIKKISDLERLISKIATGKVSPRELIYLNDSLDAIIPIKETAQKSSNDSL---K 394
Query: 559 VTSKTLHSA-LLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
TLH LL+ I ++ +P I K I+ G
Sbjct: 395 QMGNTLHGCELLREKIRGTISEDAPVAIAKGNA--------------------IAEGVHP 434
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAK 672
E+ RK S KE L+++ ++ G+ +L+ F +V G + KVP W +
Sbjct: 435 ELDELRKISTSGKELLEAMEIRESEKTGIPSLKISFNNVFGYYIEVRNTHKNKVPTEWIR 494
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ RY + E+ ++ A E++ + ++ F+ Y Q +A
Sbjct: 495 KQTLVNAERYITEELKEYETKILGAEEKIYKLENELFEQFVAWCAQYIKPVQLNANLIAQ 554
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNLHAE 790
LDCL + A + N+VRP+ D +E + I GRHPV++ L + ++ ND L+ +
Sbjct: 555 LDCLSSFAQQALENNYVRPLIDDSYE---LDIKDGRHPVIEKQLAYDTPYITNDVYLNNK 611
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA + +D I+TR+GASD+I
Sbjct: 612 EQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAREVRMGPVDKIFTRVGASDNISM 671
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVL 909
G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL +H K L
Sbjct: 672 GESTFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAIAEYLHQHPGKPKTL 731
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ D+ F G + Y+VS + +V +L K+VPG S SFG
Sbjct: 732 FATHYHELNDMSQNFDG-IKNYNVSV-----------KELKDNVLFLRKLVPGGSAHSFG 779
Query: 970 FKVAQLAQLPPSCISRATVIAAKLE 994
VA++A +P + + RA + +LE
Sbjct: 780 IHVAKMAGMPTTVLKRAEKMLKQLE 804
>gi|296127255|ref|YP_003634507.1| DNA mismatch repair protein MutS [Brachyspira murdochii DSM 12563]
gi|296019071|gb|ADG72308.1| DNA mismatch repair protein MutS [Brachyspira murdochii DSM 12563]
Length = 894
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 252/941 (26%), Positives = 448/941 (47%), Gaps = 132/941 (14%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S +K TP+ +Q E+K KY D +L+ +G + F +DA++ + +LG+ N
Sbjct: 8 SDNKEETQKLTPMMRQYKEIKDKYNDSILLFRMGDFYEVFFDDAKVVSDILGLTLTKRAN 67
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKAT 198
A +P ++ ++ +LV +G K+ + Q E P A G R ++ + T T
Sbjct: 68 VPMAGVPYHAIDNYLSKLVKSGMKIAICDQME-------DPKTAKGIVKREVTQVITPGT 120
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ + + + NYL ++ V K + +ISTG++
Sbjct: 121 ISENKYLESKSN------NYLASII-----VSKSEKNA---------ALSICDISTGELY 160
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
E N L + EAV ++ + + P + +E S I
Sbjct: 161 ASEINSN-LENQNEAVKEIINELIEEIIR-------------FSPKEIMTIESVSESIII 206
Query: 319 GGGALAEVMSLYENMGEDTLSN-NEDQNMDVPEQGNHRSAIE----GIMNMPDLAVQALA 373
E+ + + N+ T +N + + NH + GI P L + L
Sbjct: 207 -----KEIKNKFSNIFYSTTANYTAEYSYAYKTLTNHFKTVSLKSFGIEEKP-LLISLLG 260
Query: 374 LTIRHLKQFG---LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
TI ++++ LE I + R S MTL T+ LE+L N + TL
Sbjct: 261 STIFYIQELSKTSLEHISNIKLYNRKDS----MTLDYATIASLEILETIRNDNNKMTLFD 316
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
++ T T G+R L+R + PL + N I+ RLD V ++
Sbjct: 317 TIDRTKTSMGARYLKRIIVEPLLNINDINKRLDNVEFFYKNQ------------------ 358
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL- 549
+F Y + +L +G DI+R +++ P E +++ + ++ + + + +L
Sbjct: 359 ------KFMYKIRDLLQDIG---DIERLASKLALSRINPKELVSLKRFLVTSLEVITELA 409
Query: 550 --HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+ + E+V + + L++R IL P ++ ++GD I
Sbjct: 410 MNNFEDVNFEEVNDIKIITDLIERAIL--EEPKIV--------------INEGD-----I 448
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK- 665
I + + + +A + + + L + + G+ NL+ + I + IE+ AN
Sbjct: 449 IKDDYDETLKKYNEARREGRSWIAELEHNYKLDTGINNLKIRYNNVIGYYIEVTKANASS 508
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP ++ K + + RY + +++ + + ANE+ + + + + Y
Sbjct: 509 VPSDFIKRQTLIGSERYTTSKLMEYENIINEANEKSYALEYDIFINVRNKTNEYLNSILK 568
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPND 784
+ ++ +D +LA L++ N+V+P+ + I I GRHPV++ L ++F+PND
Sbjct: 569 MARVISIIDVYSSLACLAKEDNYVKPI---ITDDGIIDIKEGRHPVVEVNLKTESFIPND 625
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T L ++ E+ IITGPNM GKS Y+RQ ALI ++AQ+GSFVPA+SA++ ++D I+TR+GA
Sbjct: 626 TYLDSKNEHMLIITGPNMSGKSTYLRQTALIVLLAQIGSFVPAASAKISIVDRIFTRVGA 685
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL--E 902
SD+I +G STFL E+NE +YIL +CT +SLVI+DE+GRGTST+DG++IA+A ++YL+ E
Sbjct: 686 SDNIARGESTFLVEMNETAYILNHCTNKSLVIMDEIGRGTSTYDGLSIAWAIVEYLVHEE 745
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
+KK LF THY ++ ++ + + ++KV+ ++ D+ + ++ KV G
Sbjct: 746 NKKAKTLFATHYHELTMLE----------DLEGVKNYKVL--VEEYKDE-IIFMKKVTEG 792
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++SS+G A++A P I RA+ I KLE E +V+N
Sbjct: 793 AAQSSYGIYAAKIAGAPNKVIRRASEILKKLETEAGIQVEN 833
>gi|429756811|ref|ZP_19289393.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|429170572|gb|EKY12243.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 860
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 266/949 (28%), Positives = 425/949 (44%), Gaps = 196/949 (20%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----A 143
K TPL +Q ++K+KYPD LL+ VG + FGEDA AA L I +N A
Sbjct: 3 KETPLMKQYNQIKSKYPDALLLFRVGDFYETFGEDAVKAAHTLDIVLTNRNNGTERSELA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
P +N ++ +LV AG++V + Q E + G RG++ L T
Sbjct: 63 GFPYHSINTYLPKLVKAGYRVAICDQLEDPKLVK------GIVKRGVTELVTPG------ 110
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
V +D +SN + V +GK G G +++STG+ + + +
Sbjct: 111 -VALNDDILQSKSNNFLASV----WLGK--QGC---------GAAFLDVSTGEFLVAQGD 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ + +L + P+ELL+ + K+
Sbjct: 155 KTYI----DKLLQNFRPSELLVAKHQKKE------------------------------- 179
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRHLKQ 381
E+ G+D H +E + D A Q L LK
Sbjct: 180 -----FAEHFGDDF----------------HCFYLEDWVFKDDYAQQVLTKHFQTNSLKG 218
Query: 382 FGL----ERIMCLGASFRSLSGSME-----------------MTLSANTLQQLEVLRNNS 420
FG+ E I+ GA LS + + L T++ LE+ N+
Sbjct: 219 FGVDELTEAILTAGAILYYLSETQHHQLQHITAIQRIAEEAYVWLDKFTIRNLELYTGNT 278
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
S +LL +++ TL+ GSR L+RW+ PL +LD + R
Sbjct: 279 TPS--VSLLDVIDKTLSPMGSRTLKRWLALPL-------KKLDKI----------RQRHE 319
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
V + K+ DV L V T+L R DI+R I+++ P E +
Sbjct: 320 VVDYFLKHIDV----------LEQVKTALSRMGDIERLISKVATLKINPREVV------- 362
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTAS--SPAVIGK--------AAKLLS 590
QL E H L+K+L L ++ S ++G +A++
Sbjct: 363 -------QLRASLE----------HIPLIKQLCLASANESLTLLGDKLHSCEQLSARIAE 405
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
T+N++A ++ I+ G +E+ R S K LD L+ ++ G+ +L+ S
Sbjct: 406 TLNEDAP--VNIAKGNAIAKGFSAELDELRGLSHSGKSYLDDLLLRESQRTGIPSLKIDS 463
Query: 651 VSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+ + IE+ K VP +W + + RY + E+ ++ A E++ + ++
Sbjct: 464 NNVFGYYIEVRNTHKDKVPADWIRKQTLVNAERYITGELKEYEAKILGAEEKIAQLEQSL 523
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGR 768
+ + Y + Q + LDCL ATL+ N+ RP + +E I I GR
Sbjct: 524 YAELIAFISEYIGQVQTNATLIGQLDCLCGFATLAMENNYHRP---EMNEGYAIEIKDGR 580
Query: 769 HPVLDTILLDN--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
HPV++ L ++ ND L ER+ +ITGPNM GKS +RQ ALI ++AQ+GSFVP
Sbjct: 581 HPVIEKQLPVGTPYIANDVYLDRERQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVP 640
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
A++A+L ++D I+TR+GASD+I G STF+ E+NEA+ IL N + +SLV++DE+GRGTST
Sbjct: 641 AANAQLGIVDKIFTRVGASDNISMGESTFMVEMNEAALILNNISDRSLVLLDEIGRGTST 700
Query: 887 HDGVAIAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPM 945
+DG++IA+A +YL EH K LF THY ++ ++ +F + Y+VS
Sbjct: 701 YDGISIAWAIAEYLHEHPSKAKTLFATHYHELNEMSEQFE-RIKNYNVSV---------- 749
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V +L K+ G S SFG VA++A +P I +A + KLE
Sbjct: 750 -KETKDSVLFLRKLTEGGSAHSFGIHVAKMAGMPQYVIQKANKMLKKLE 797
>gi|28210987|ref|NP_781931.1| DNA mismatch repair protein MutS [Clostridium tetani E88]
gi|44888200|sp|Q895H2.1|MUTS_CLOTE RecName: Full=DNA mismatch repair protein MutS
gi|28203426|gb|AAO35868.1| DNA mismatch repair protein mutS [Clostridium tetani E88]
Length = 881
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 249/934 (26%), Positives = 430/934 (46%), Gaps = 149/934 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ QQ +E+K K D +L +G + F EDAE A+K L G L
Sbjct: 2 KLTPMMQQYLEVKEKCKDCILFFRLGDFYEMFFEDAETASKELELVLTGRDCGLSKRAPM 61
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
IP + ++ RLV+ G+K+ + +Q E P A G R + + T T
Sbjct: 62 CGIPYHSASNYINRLVSKGYKIAICEQLE-------DPSAAKGIVKRDIVKIVTPGTYSD 114
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ + ++ NY++ + +D +V + +ISTGD +
Sbjct: 115 SNFLNETKN------NYIMSLYIEDKSVA----------------MCFCDISTGD--FFA 150
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ +S + + P+ELLL +K +K +L + + +D F
Sbjct: 151 TSHSLDKSIILDEISKFDPSELLL----NKDIDKNILKEIKNRFTISITNLEKDYFKDYN 206
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
L G+ + + E+ ++ + + GN L I ++
Sbjct: 207 LLE---------GQFSDFSKEEYSLVLIKCGN-----------------GLLKYILETQK 240
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L I C F++ + +++ N+ + LE+ + S G+LL +++ T G+
Sbjct: 241 MSLGHIDC----FKNYNIVDYLSMDINSRRNLEITETIRDKSRKGSLLWVLDKCSTAMGA 296
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RL+R WV PL ++ I RL+AV E+ + + H++
Sbjct: 297 RLIRNWVEQPLINKEKIDKRLNAVEELVLN---------ISLHED--------------- 332
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL---YAGKQLQQLHIDGEYREK 558
L L + DIQR + +I + E +++ +I Y L +L D +++
Sbjct: 333 LKDALKDI---YDIQRIVGKISSKNVNAKELLSLKNSIEKLPYIKDILSKLEADL-FKDM 388
Query: 559 VTS----KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+++ K ++ L ++ +P + K L I NG
Sbjct: 389 LSNLDELKDIYELLESSIM---DNPPITIKDGNL-------------------IKNGFNK 426
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPL-NWA 671
E+ R A KE + +L + R+ G+++L+ + IE+ +N VP +
Sbjct: 427 EIDELRMAKSHGKEWIANLESSEREFTGIKSLKVGYNKVFGYFIEVTKSNISSVPEGRYV 486
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY +PE+ D++ A E+L + + S + + +A
Sbjct: 487 RKQTLSNCERYITPELKEMEDKILGAEEKLISLEYEVFVSIRNSIEKDIDRMKISANIVA 546
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAE 790
LDCL +L+T++ N+ +P ++ ++ I I GRHPV++ ++ +FV NDT + E
Sbjct: 547 ILDCLSSLSTVALENNYSKPKILEGND---IIIKDGRHPVVEKMIPTGSFVANDTTMDTE 603
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ITGPNM GKS Y+RQVALI IMAQ+GSFVPA A + + D I+TR+GASD +
Sbjct: 604 DNQMLLITGPNMAGKSTYMRQVALITIMAQIGSFVPAKEASISLCDKIFTRIGASDDLSA 663
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMV 908
G+STF+ E+ E S IL+N T++SL+I+DE+GRGTST DG++IA+A ++Y+ +K +
Sbjct: 664 GKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTSTFDGLSIAWAVIEYICNNKNLRSKT 723
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ ++ K G V Y VS + D+D+ +L K++ G ++ S+
Sbjct: 724 LFATHYHELIQLENKIKG-VKNYSVSV-----------KEMDKDIVFLRKIIEGGADQSY 771
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
G +VA+LA LP I RA I +E ++++
Sbjct: 772 GIEVAKLAGLPEDVIIRAKEILNSIEQNKDNKIE 805
>gi|387132511|ref|YP_006298483.1| DNA mismatch repair protein MutS [Prevotella intermedia 17]
gi|386375359|gb|AFJ08283.1| DNA mismatch repair protein MutS [Prevotella intermedia 17]
Length = 924
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 257/946 (27%), Positives = 429/946 (45%), Gaps = 167/946 (17%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS- 144
NK TP+ +Q +K K+PD L++ G + + +DA A+K+LGI +N A
Sbjct: 41 NKGLTPMMRQFFSMKEKHPDALMLFRCGDFYETYCDDAIEASKILGITLTRRNNGAAAGD 100
Query: 145 ----IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSAL 193
P L+ + +L+ AG +V + Q E K GK G RG++ L
Sbjct: 101 EMAGFPHHALDTFLPKLIRAGKRVAICDQLEDPKKKREALKGKRGLSAEDKMVRRGITEL 160
Query: 194 YTKATLEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
T V G++ E+N+L V FG G GV ++I
Sbjct: 161 VTPG-------VAMGDNVLNYKENNFLAAVH-------------FGKG---SCGVSFLDI 197
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E ++ + SP E+L + E+ R+
Sbjct: 198 STGEFLTGEGTFDYV----EKLIGNFSPKEVLYDRARKSDFERHF--------GTRLCVY 245
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
+ ++ L+ L ++ G L + V N A IM +L
Sbjct: 246 EMEDWVFTD-LSARQKLLKHFGTKNL-----KGFGVDHLNNGVIAAGAIMQYLELTQHT- 298
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGTLLHI 431
I H+ S + + L T++ LE++ +GS +LL++
Sbjct: 299 --NINHI------------TSLARIEEEKYVRLDRFTIRSLELVAPMQEDGS---SLLNV 341
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T+T G R+L RW+ PL D I+ RLD V +
Sbjct: 342 VDRTITPMGGRMLHRWLVFPLKDVKPINERLDIV------------------------EY 377
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI----------LY 541
EP F L+ L +G D++R I+++ +P E + + A+ LY
Sbjct: 378 YFREPDFRQCLNDQLHRMG---DLERIISKVAAGRVSPREVVQLKIALRAIQPMKTACLY 434
Query: 542 AGKQL-----QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA 596
A + +QL++ R+++ + + P ++ K
Sbjct: 435 ANNEALKRVGEQLNLCESIRDRIEQE-----------IKPDPPHLVAK------------ 471
Query: 597 ADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
GD +I++G +E+ R + K+ L + Q G+ +L+ + +
Sbjct: 472 ---GD-----VIAHGFNAELDELRSIRDNGKQVLLDIQEKEAAQTGISSLKIGFNNVFGY 523
Query: 657 LIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
+E+ FK VP +W + + + RY +PE+ ++ A+E++ + ++ ++
Sbjct: 524 YLEVRNTFKDKVPSDWIRKQTLAQAERYITPELKEYEAKILGADEKILALEARLFNELVQ 583
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
+ + + Q +A LDCL A A ++ +VRPV VDD + I I GRHPV++T
Sbjct: 584 DMQEFIPQIQINANLVARLDCLLAFANIAEENKYVRPV-VDD--SMVIDIKKGRHPVIET 640
Query: 775 ILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
L + ++PND L E++ +ITGPNM GKS +RQ ALI ++AQ+G FVPA A +
Sbjct: 641 QLPLGEPYIPNDVYLDNEQQQIMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAEGARI 700
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
++D ++TR+GASD+I G STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++I
Sbjct: 701 GLVDKVFTRVGASDNISLGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISI 760
Query: 893 AYATLDYLLEHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
A+A ++YL E + LF THY ++ ++ F + ++VS + D
Sbjct: 761 AWAIVEYLHEQPRAAARTLFATHYHELNEMAKNFR-RIKNFNVSV-----------KEVD 808
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ ++ K+ G SE SFG VA +A +P S + RA V+ +LEA+
Sbjct: 809 GKIIFVRKLERGGSEHSFGIHVADIAGMPKSIVKRANVVLKELEAD 854
>gi|188995905|ref|YP_001930157.1| DNA mismatch repair protein MutS [Porphyromonas gingivalis ATCC
33277]
gi|188595585|dbj|BAG34560.1| DNA mismatch repair protein MutS [Porphyromonas gingivalis ATCC
33277]
Length = 882
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 268/989 (27%), Positives = 458/989 (46%), Gaps = 161/989 (16%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTASIPTF 148
+Q ++K K+PD +L+ VG + F EDA +A+++LGI N A P
Sbjct: 3 RQYFQIKQKHPDAILLFRVGDFYETFSEDAIVASEILGITLTRRANGAAQFVELAGFPHH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDVGG 207
L+ ++ +LV AG +V + Q E P K RG++ L T V
Sbjct: 63 ALDTYLPKLVRAGKRVAICDQLED-------PKKTKTLVKRGITELVTPG-------VST 108
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
++ + N + V D V G+ ++ISTG+ + G+ N ++
Sbjct: 109 NDNVLSHKENNFLAAVSCDKEV---------------FGISLLDISTGEFMAGQGNADYV 153
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
E +L + P E+L+ +++E+ D F G + ++
Sbjct: 154 ----EKLLTNYRPKEILV-----ERSER---------------SRFNDLFHWSGFIFDM- 188
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL---KQFGL 384
ED ++E+ + V + + +S + +AV A + +L + L
Sbjct: 189 -------EDWAFSSENNRLRVLKHFDLKSLKGFGLEELSMAVTAAGAVLNYLDLTQHHQL 241
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
+ I L L + + L T++ LE+L + G + +LL I++HT+T G+R +
Sbjct: 242 QHITSLS----RLDENRYVRLDKFTVRSLELLSPMNEGGK--SLLDIIDHTITPMGARRM 295
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
R+W+ PL D I AR R E +H E+ + I++
Sbjct: 296 RQWIVFPLKDPARIQAR-------------QRVVEFFFRHPEERA-----------IIAE 331
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT---- 560
LT +G D++R +T+ +P E + + A L A + ++++ + T
Sbjct: 332 HLTEIG---DLERLVTKGAMGRISPREMVQLRIA-LQALEPIKEVCTQADEENLRTLGGK 387
Query: 561 ---SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
K L +L+ ++ +PA +G+ +I++G + +
Sbjct: 388 LELCKELRDKILREVM--PDAPAALGRGP--------------------VIAHGVDATLD 425
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNS 675
R S K+ L L ++ G+ +L+ + + IE+ K VP W + +
Sbjct: 426 ELRALAYSGKDYLIKLQQQEIERTGIPSLKVAYNNVFGYYIEVRNTHKDKVPAEWIRKQT 485
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY + E+ ++ A E++ + + + E Y A Q QA+A+LDC
Sbjct: 486 LVSAERYITEELKEYEAKILGAEEKIAALEGQLYALLVAELQRYVAPLQQDSQAVASLDC 545
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNLHAEREY 793
L + A +R F+ PV VD E I I +GRHPV++ L + ++ ND L +R+
Sbjct: 546 LLSFAESARRYRFICPV-VD--ESFTIDIKAGRHPVIEQQLPADEPYIANDIYLDTDRQQ 602
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
I+TGPNM GKS +RQ ALI +MAQ+GSFVPA SA + ++D I+TR+GASD+I G S
Sbjct: 603 VIIVTGPNMSGKSALLRQTALISLMAQIGSFVPAESARIGMVDSIFTRVGASDNISMGES 662
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVLFV 911
TF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA++ ++Y+ ++ K LF
Sbjct: 663 TFMVEMQEASNILNNLTPRSLVLFDELGRGTSTYDGISIAWSIVEYIHDNPKAHPRTLFA 722
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ G + H +++ +V G M +L K+ PG S SFG +
Sbjct: 723 THYHELNELE----GQLDRVHNFNVSAREVDGKM--------LFLRKLEPGGSAHSFGIQ 770
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK-RDLLVKLSDQEQEAQENMP---- 1026
VA+L +P + RAT I +LE E R++ K +D S++ + A +P
Sbjct: 771 VARLGGMPHHIVQRATDILHRLEQE-RERIEGEEPKTKDTKRGPSEKVKNASPTLPRDEK 829
Query: 1027 -VSPESFYLGRVEASEDLISAYRDLFLNL 1054
S + + L + + ++S R+ L+L
Sbjct: 830 GRSIDGYQLSFFQLDDPVLSQIREEILDL 858
>gi|452846757|gb|EME48689.1| hypothetical protein DOTSEDRAFT_141977 [Dothistroma septosporum
NZE10]
Length = 1041
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 254/994 (25%), Positives = 427/994 (42%), Gaps = 115/994 (11%)
Query: 28 SPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP-KTPKKPKLSPHTLNPIPTPS--SQTT 84
S P + P K + T S PAK++ + P + P + NP P +T
Sbjct: 80 STEPRRTVPSAKKSGTSSNGPAKKQKAHTTDPSDRYPWLASIQDADRNPPDHPDYDKRTI 139
Query: 85 H-----NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
+ ++P E+Q E+K K+ D ++ + G + + DA + ++ + N
Sbjct: 140 YIPPMAWNNFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVN 199
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK------AHGPGKAGPFGRGLSAL 193
+P L+ V G+K+ V Q E+A K G + R L+++
Sbjct: 200 MRMVGVPEASLDHWANMFVAKGYKIARVDQMESALGKDMRERNIKGKKEEKVIRRELASV 259
Query: 194 YTKATLEAAEDVGGG--EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
T TL V G +D + Y + + + + GK G+ V+
Sbjct: 260 LTSGTL-----VEGSMLQDDM---ATYCAAIKESELD-GK-----------PHFGIAFVD 299
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
+T E +D + E + P E+LL + +L P + +
Sbjct: 300 TATAQFQLTEIHDDADMTKFETFVAQTRPGEILLEKGCVSAKALRMLKNNTPPTTIWNHL 359
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP---DLA 368
F+ + + + + D + NH SA ++ ++
Sbjct: 360 KPDKEFLSAD-------------KTRMKIDGEAYFDKCVEDNH-SAWPSVLQEAKNKEIV 405
Query: 369 VQALALTIRHLKQFGLER-IMCLG--ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEY 425
AL I +L +ER ++ LG A + + + + L +L LE+ N +GS
Sbjct: 406 FSALGGLIWYLGTLKIERDLVTLGNFAWYDPIRKASSLVLDGQSLINLEIFANTFDGSTE 465
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
GTL ++N +T +G R+LR+WV HPL D I+ R DA+ +
Sbjct: 466 GTLFTMLNRCVTPFGKRMLRQWVCHPLADARKINQRFDAIEAL----------------- 508
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
N+D T+++ SL + PD++R I+R+ +F+ V++
Sbjct: 509 --NADGTVMD--------RFCASLSKLPDLERLISRVHAGRCRAQDFVKVLEGFEQIEYT 558
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
+ L G LL +LI +S P + G ++ A + L
Sbjct: 559 MSLLGAFGS----------GEGLLGQLI--SSMPDLDGALKHWKDAFDRTKAKED---GL 603
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK 665
I G + +++ + +EL L+ RK LG ++F + +E+P +
Sbjct: 604 FIPQPGVEEDFDESQERIDGIGKELQKLLQKARKDLGSSTIKFTDNGKEIYQLEVPLKVQ 663
Query: 666 --VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+P +W ++++TK+ R++ PE+ + L A E V +A F F YA +
Sbjct: 664 GNIPKHWKQMSATKQVKRWYFPELEGLVQDLKEAQEMHGQVIKALAGRFFARFDLDYAIW 723
Query: 724 QAAVQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIHICSG-RHPVLDTILLDNF 780
AA + +A LDCL +LA + S RP FVD+ + + RHP ++T NF
Sbjct: 724 LAAAKIVAQLDCLISLAKASASMGSPSCRPEFVDEDNAQSVLVFQTLRHPCIETTT--NF 781
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
+PND L + ++TG N GKS +R + I+AQ+G +VP SA + +D I +
Sbjct: 782 IPNDIGLGGDAAAITLLTGANAAGKSTVLRMTCVAVILAQIGCYVPCDSARMTPVDRIMS 841
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+GA D+I G+STF+ EL+E IL T +SLVI+DELGRGTS++DGVA+A A L ++
Sbjct: 842 RLGAHDNIFAGQSTFMVELSETKKILAEATPRSLVILDELGRGTSSYDGVAVAQAVLHHV 901
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
H + F THY +A +F +H + + D + +DVT+LY++
Sbjct: 902 ATHVGALGYFATHYHSLA---AEF-----QHHPEIVAKRMAVHVDDDR--RDVTFLYQLE 951
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
GV+E S+G A + +P I RA A E
Sbjct: 952 NGVAEGSYGMHCAAMCGIPNKVIDRAEEAAQNWE 985
>gi|296124289|ref|YP_003632067.1| DNA mismatch repair protein MutS [Planctomyces limnophilus DSM 3776]
gi|296016629|gb|ADG69868.1| DNA mismatch repair protein MutS [Planctomyces limnophilus DSM 3776]
Length = 891
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 261/955 (27%), Positives = 425/955 (44%), Gaps = 144/955 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAHLDHN----FMTAS 144
TP+ Q+ +E+K ++P +L +G + F EDA++AA++LG+ D N A
Sbjct: 15 TPMMQRYLEVKDQHPAAILFFRMGDFYELFYEDAKVAARILGLTLTSRDKNSENPVPMAG 74
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L ++++++ AG +V + +Q E G R ++ + T TL
Sbjct: 75 FPYHALTGYLQKMIRAGHRVAICEQVEDPK------AAKGMVKREVTQIVTPGTLT---- 124
Query: 205 VGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+D E+N L ++ GK +G+ +E+STG +
Sbjct: 125 ----DDSLLDPRETNLLAAILP-----GKSHSGL-----------AWLELSTGRFICATL 164
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY---------AGPASNVRVECAS 313
S + L L PAE+L + + E + +A P R E A
Sbjct: 165 PA----SQIHDELARLQPAEVLTPE---RSREDLTIARIRLGAWAVTERPPWAYRPEEAH 217
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA 373
R L + G TL GN S + + +A AL
Sbjct: 218 R-------------LLLDQFGVATLEG-------FGFSGNSSSTTQATIEPGIIAAGALL 257
Query: 374 LTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
+R ++ L + + S + + +T + LE+ R + G+LL ++
Sbjct: 258 EYVRETQKSQLIHL----SRLEPYEPSQHLLIDESTRRSLELTRTLRSNQREGSLLWAID 313
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T+T G+RLL W+++PL +R I ARL+AVSE+ + RT++S
Sbjct: 314 QTVTPMGARLLLEWLSNPLKERTAIEARLNAVSELVVDL---RTTQS------------- 357
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
L +L + DIQR RI ATP + +++ + L +
Sbjct: 358 --------LQEILKT---GYDIQRLTARIGTGRATPRDLVSLTRT----------LSLLP 396
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM---IISN 610
+ + ++ + S LL L A I L + D+ L NL I
Sbjct: 397 QIKARLAGR--RSTLLNEL------EAKIDLHQDLREAIEAALVDEPPL-NLTEGGAIRP 447
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPL 668
G ++ R + KE + + ++ G+ NL+ F V G KVP
Sbjct: 448 GFDPQLDEWRDLARGGKEWMAAYQAEEVRRTGIANLKVGFNRVFGFYLECSASQADKVPP 507
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
+ + + K RY +P + D++ A + + + ++ AE + +
Sbjct: 508 EYIRKQTLKNYERYITPALKEYEDKVLQAESRSIALEQQLFSDLRQKVSSRAAELRVTAE 567
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNL 787
+LA LD L + A L+ + +VRP EPV + I GRHPVLD +L FVPND L
Sbjct: 568 SLAVLDVLCSFAILATRRQYVRPEIAS--EPV-LEIRQGRHPVLDQLLPTGGFVPNDIRL 624
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
Q+ITGPNM GKS YIRQ AL+ I+ Q+GSFVPA SA + + D I+ R+GASD
Sbjct: 625 GGSNGLIQLITGPNMAGKSTYIRQAALLTILTQIGSFVPAESARIGLADRIFARVGASDE 684
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ +G+STF+ E+ E + IL + TA SLVI+DE+GRGTST+DG+++A+A ++L + C
Sbjct: 685 LGRGQSTFMVEMTETARILHSATASSLVILDEIGRGTSTYDGISLAWAITEFLHDAVGCR 744
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
F THY ++ + SV ++V+ + + DV +++++VPG ++ S
Sbjct: 745 TFFATHYHELTQLSASLK-SVMNWNVAV-----------REHNDDVVFMHQIVPGAADKS 792
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQ 1022
+G V +LA LP + RA I LEAE + + K L + + + +E Q
Sbjct: 793 YGIHVGRLAGLPGVVLDRAREILKVLEAEQTDHLSQDPGKSRLPARKTRRSREQQ 847
>gi|170755080|ref|YP_001781348.1| DNA mismatch repair protein MutS [Clostridium botulinum B1 str.
Okra]
gi|189030762|sp|B1IM68.1|MUTS_CLOBK RecName: Full=DNA mismatch repair protein MutS
gi|169120292|gb|ACA44128.1| DNA mismatch repair protein MutS [Clostridium botulinum B1 str.
Okra]
Length = 932
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 253/928 (27%), Positives = 426/928 (45%), Gaps = 150/928 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q +E+K D +L +G + F EDA++A+K L G L+
Sbjct: 4 TPMMRQYLEVKESCKDCILFFRLGDFYEMFFEDAKVASKELELVLTGRDCGLEERAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP N ++ RLV+AG+K+ + +Q E + G RG+ + T T D
Sbjct: 64 IPYHAANTYIGRLVSAGYKIAICEQLEDPS------ASKGIVKRGIIKIITPGTYT---D 114
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
E+ ++NY++ DD +S D+ GEFN
Sbjct: 115 SSFLEEN---KNNYIMSFYLDDNMCA---------------------MSFADISTGEFNS 150
Query: 265 GFLRSGLEAVLLS----LSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ EAV+L +P E++L + + E + N+ +
Sbjct: 151 TH-SNFKEAVVLDEISKFAPREIVLEENIK---ESFIHTIKERFPNISIS---------- 196
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ E+ N D N+ + + E I+ + L I H +
Sbjct: 197 -----------KIKEENFDYNIDNNLKEQFNNFNENEYETIVKK---SANGLLYYIFHTQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + + S+ + T+ N+ + LE+ N ++ G+LL +++ T T G
Sbjct: 243 KNILSNINKI--DYYSIVDYL--TIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTAMG 298
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R LRRW+ PL ++N I RL+AV E+ ++ Q D K
Sbjct: 299 GRQLRRWIEQPLINKNPIENRLNAVEELLNNISL--------QEDLKED----------- 339
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQQLHIDGEYRE 557
L S+ DI+R + ++ ++ E I++ +I Y K L D
Sbjct: 340 -LKSIY-------DIERIVGKVASKSVNAKELISLKCSIGKVPYIKKYLSNFKSDLFLNM 391
Query: 558 KVTSKTLHS--ALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+ TL LL + +L S +V +G+ II G E
Sbjct: 392 EQCIDTLEDIHKLLDKALLDNPSLSV----------------KEGN-----IIKEGFNEE 430
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPL-NWAK 672
V R+A + K+ + SL +++ G+++L+ + IE+ AN VP + +
Sbjct: 431 VDSLREAKSNGKKWIASLEQKEKEETGIKSLKVSYNKVFGYFIEITKANLNLVPEGRYIR 490
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQALA 731
+ RY +PE L +++ L EE I + +++F Q + ++
Sbjct: 491 KQTLSNAERYITPE-LKEMEEKILGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARIIS 549
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAE 790
+DCL +LAT++ N+++P +E I I GRHPV++ ++ F+ ND+ + +
Sbjct: 550 DIDCLCSLATVALENNYIKPNINAKNE---ILIEEGRHPVVEKVIPKGEFISNDSLIDTK 606
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ITGPNM GKS Y+RQVALI IMAQ+GSFVPA A + + D I+TR+GASD +
Sbjct: 607 ENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKKANISICDKIFTRIGASDDLAA 666
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMV 908
G+STF+ E+ E S IL+N T++SLV++DE+GRGTST+DG++IA++ ++Y+ +K +C
Sbjct: 667 GKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKT 726
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ ++ G V Y VS S+ + ++ +L K++ G ++ S+
Sbjct: 727 LFATHYHELTKLEDNIEG-VKNYSVSV-----------SELENEIVFLRKIIRGGADQSY 774
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAE 996
G +VA+LA LP I+RA I +E +
Sbjct: 775 GIEVAKLAGLPSPVINRAKEILQHIEGD 802
>gi|429246332|ref|ZP_19209662.1| DNA mismatch repair protein MutS [Clostridium botulinum
CFSAN001628]
gi|428756642|gb|EKX79184.1| DNA mismatch repair protein MutS [Clostridium botulinum
CFSAN001628]
Length = 882
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 253/928 (27%), Positives = 426/928 (45%), Gaps = 150/928 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q +E+K D +L +G + F EDA++A+K L G L+
Sbjct: 4 TPMMRQYLEVKESCKDCILFFRLGDFYEMFFEDAKVASKELELVLTGRDCGLEERAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP N ++ RLV+AG+K+ + +Q E + G RG+ + T T D
Sbjct: 64 IPYHAANTYIGRLVSAGYKIAICEQLEDPS------ASKGIVKRGIIKIITPGTYT---D 114
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
E+ ++NY++ DD +S D+ GEFN
Sbjct: 115 SSFLEEN---KNNYIMSFYLDDNMCA---------------------MSFADISTGEFNS 150
Query: 265 GFLRSGLEAVLLS----LSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ EAV+L +P E++L + + E + N+ +
Sbjct: 151 TH-SNFKEAVVLDEISKFAPREIVLEENIK---ESFIHTIKERFPNISIS---------- 196
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ E+ N D N+ + + E I+ + L I H +
Sbjct: 197 -----------KIKEENFDYNIDNNLKEQFNNFNENEYETIVKK---SANGLLYYIFHTQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + + S+ + T+ N+ + LE+ N ++ G+LL +++ T T G
Sbjct: 243 KNILSNINKI--DYYSIVDYL--TIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTAMG 298
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R LRRW+ PL ++N I RL+AV E+ ++ Q D K
Sbjct: 299 GRQLRRWIEQPLINKNPIENRLNAVEELLNNISL--------QEDLKED----------- 339
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQQLHIDGEYRE 557
L S+ DI+R + ++ ++ E I++ +I Y K L D
Sbjct: 340 -LKSIY-------DIERIVGKVASKSVNAKELISLKCSIGKVPYIKKYLSNFKSDLFLNM 391
Query: 558 KVTSKTLHS--ALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+ TL LL + +L S +V +G+ II G E
Sbjct: 392 EQCIDTLEDIHKLLDKALLDNPSLSV----------------KEGN-----IIKEGFNEE 430
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPL-NWAK 672
V R+A + K+ + SL +++ G+++L+ + IE+ AN VP + +
Sbjct: 431 VDSLREAKSNGKKWIASLEQKEKEETGIKSLKVSYNKVFGYFIEITKANLNLVPEGRYIR 490
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQALA 731
+ RY +PE L +++ L EE I + +++F Q + ++
Sbjct: 491 KQTLSNAERYITPE-LKEMEEKILGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARIIS 549
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAE 790
+DCL +LAT++ N+++P +E I I GRHPV++ ++ F+ ND+ + +
Sbjct: 550 DIDCLCSLATVALENNYIKPNINAKNE---ILIEEGRHPVVEKVIPKGEFISNDSLIDTK 606
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ITGPNM GKS Y+RQVALI IMAQ+GSFVPA A + + D I+TR+GASD +
Sbjct: 607 ENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKKANISICDKIFTRIGASDDLAA 666
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMV 908
G+STF+ E+ E S IL+N T++SLV++DE+GRGTST+DG++IA++ ++Y+ +K +C
Sbjct: 667 GKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKT 726
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ ++ G V Y VS S+ + ++ +L K++ G ++ S+
Sbjct: 727 LFATHYHELTKLEDNIEG-VKNYSVSV-----------SELENEIVFLRKIIRGGADQSY 774
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAE 996
G +VA+LA LP I+RA I +E +
Sbjct: 775 GIEVAKLAGLPSPVINRAKEILQHIEGD 802
>gi|21674323|ref|NP_662388.1| DNA mismatch repair protein MutS [Chlorobium tepidum TLS]
gi|44888223|sp|Q8KCC0.1|MUTS_CHLTE RecName: Full=DNA mismatch repair protein MutS
gi|21647498|gb|AAM72730.1| DNA mismatch repair protein MutS [Chlorobium tepidum TLS]
Length = 878
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 265/939 (28%), Positives = 426/939 (45%), Gaps = 131/939 (13%)
Query: 81 SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNF 140
S K+ TP+ +Q +E+K +YP LL+ VG + F +DA + L I N
Sbjct: 4 SAQGRTKEPTPMMRQYLEVKERYPGYLLLFRVGDFYETFLDDAVTVSSALNIVLTRRSNG 63
Query: 141 MTASIPTFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
IP H + +LV GFKV V Q E A+ G R ++ + T
Sbjct: 64 GAGEIPLAGFPHHASEGYIAKLVTKGFKVAVCDQVEDPALAK------GIVKREITDIVT 117
Query: 196 KATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTG 255
Y ++DD N G + GV V+++T
Sbjct: 118 PGI------------------TYSDKILDDRHNNYLCAVAPVKRGREHMAGVAFVDVTTA 159
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRD 315
+ E G L+ L+ SL P+E+L+ S+ E E ++
Sbjct: 160 EFRMTELPLGELKDFLQ----SLRPSEILIS---SRDKELR-------------ESLAKS 199
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI----MNMPDLAVQA 371
F G +L+ + E + E+Q V E +++G +A
Sbjct: 200 LFSG--------ALFTTLDEWMFT--EEQAARVLENHFKTHSLKGFGIEGYEAGRIAAGV 249
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+ + KQ L+ ++ +G + MTL T + LE++ + +GS G+LL +
Sbjct: 250 ILQYLEEAKQGSLKYLVRIGL----VESGETMTLDIQTCRNLEIISSMQDGSLNGSLLEV 305
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T G+RLLRRW+ HPL + R DAV E+ ++
Sbjct: 306 IDRTKNPMGARLLRRWLLHPLRKLEPVVRRHDAVGELLDA-------------------- 345
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
P+ + LG D++R + RI A P E + + + L QL+ L +
Sbjct: 346 ----PEMR---EGIRGMLGGIIDLERALARIATSRAMPRE-VRQLGSSLAMIPQLKSL-L 396
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
+G ++ L L L T I KA ++ EA+ G L + I G
Sbjct: 397 EGSKSLRLRELALRLDPLPELAET------IEKA------LDAEAS--GTLRDGGYIRAG 442
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVPLN 669
+E+ R A++ L + R++ + L+ + IE+ AN KVP
Sbjct: 443 YHAELDELRAISSGARDRLLEIQQQERQRTSISTLKVQYNKVFGYYIEVSRANSDKVPEY 502
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ K + RY P + +++ A E+ ++ + A Q A
Sbjct: 503 YEKKQTLVNAERYTIPALKEYEEKILTAEEKSQLLEHQLFQELCAMIAEQAASIQTTAAA 562
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNL 787
LA LDCL A+ + + RPV +E ++ I +GRHPVL+ IL + +V ND +
Sbjct: 563 LAELDCLACFASCADEFGYCRPVM---NEGTELSIRAGRHPVLERILGADEPYVANDCQV 619
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+E++ IITGPNM GKS Y+RQV L+ ++AQVG FVPA SAE+ ++D I+TR+GASD+
Sbjct: 620 GSEQQLL-IITGPNMAGKSSYLRQVGLVVLLAQVGCFVPAESAEIGLVDRIFTRVGASDN 678
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ G STFL E+NEA+ IL N T +SL+++DE+GRGTST DG++IA++ +Y+ + +
Sbjct: 679 LTSGESTFLVEMNEAASILNNATERSLLLLDEIGRGTSTFDGMSIAWSMCEYIHDQLRSR 738
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++A+++++F V T+ V+ +L K+V G S++S
Sbjct: 739 TLFATHYHELAELESRFERIVNFNATVVETADTVI------------FLRKIVRGASDNS 786
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLE-AEVSSRVQNRS 1005
+G +VA++A +PP I RA I A +E EV VQ ++
Sbjct: 787 YGIEVAKMAGMPPEVIERAREILAGMERREVEVPVQRQA 825
>gi|449275264|gb|EMC84167.1| DNA mismatch repair protein Msh6, partial [Columba livia]
Length = 1247
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 269/962 (27%), Positives = 445/962 (46%), Gaps = 84/962 (8%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP ++ +LK++ D ++ +VG + + DA + LG+ + + + P
Sbjct: 320 KCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVIGVNELGL-IFMKGTWAHSGFPE 378
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAI-KAHGPGKAGP------FGRGLSALYTKATLE 200
LV G+KV V+QTET + +A A P R + + TK T
Sbjct: 379 TAFGRFSDVLVQKGYKVARVEQTETPEMMEARCKSAAHPTKFDKVVRREICRIITKGTQT 438
Query: 201 -AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
+ D E+ S YL+CV + + + G+ V+G V V+ S G
Sbjct: 439 YSILDCDPSEN----HSKYLLCVKEKEESSGQ---RVYG--------VCFVDTSVGKFYV 483
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
G+F+D S ++ +P ++L + LS T+K+L S + S F
Sbjct: 484 GQFSDDRHCSRFRTLVAHYTPVQVLYEKGNLSVDTQKIL--KGSLVSCFQEGLISGSQFW 541
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM--NMPDLAVQALALTI 376
+V+ E E S N V + S G+ +LA+ AL +
Sbjct: 542 NASKTLKVLLEEEYFKEKQNSENGCSLPPVIKSLTSESDSLGLTPGENSELALSALGGCV 601
Query: 377 RHLKQFGLERIMCLGASFRS------------------LSGSMEMTLSANTLQQLEVLRN 418
+LK+ +++ + A+F + M L TL LEVL+N
Sbjct: 602 FYLKKCLIDQELLSLANFEEYVPVDIDTAKTISSRSFFVKTDQRMVLDGVTLMNLEVLQN 661
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
+NG+ GTLL ++ T +G RLL++W+ PLC+ I+ RLDAV ++ ++ S
Sbjct: 662 GTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAV--PHKMS 719
Query: 479 ESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA 538
E V +H +K D+ + + + I S + + PD R I + + IA +
Sbjct: 720 E-VSEHLKKLPDLERLLSKIHSIGSPLKSQ--NHPD-SRAI--FYEEIKYSKKKIADFLS 773
Query: 539 ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK--EA 596
L K + ++ +D E+V S S +LK+L+ T + G+ L + + + A
Sbjct: 774 ALEGFKVMNEI-VD--VMEEVAS-DFKSEVLKQLV-TRKAKNPDGRFPDLSAELKRWDTA 828
Query: 597 ADQGDLLNLMIIS--NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
D +I+ G + +A + +++ +E+L ++ RK LG +++ +
Sbjct: 829 FDHNQARKTGVITPKAGFDPDYDKALQDIKAVEEDLHKYLDKQRKLLGFKSVLYWGAGKN 888
Query: 655 THLIELPANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
+ +E+P + +P + +S K RY + E+ L + A E +
Sbjct: 889 RYQMEIPESVISRNLPEEYELKSSRKGYKRYWTKEIERMLAAMVNAEERRDAALKDCMRR 948
Query: 712 FLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVFV--DDHEPVQIHICSG 767
F ++Q AV+ +A LD L +LA S++ + RPV + D P + + +
Sbjct: 949 LFYNFDQNSKDWQTAVECIAVLDVLMSLANYSQDGDGPLCRPVILLPVDSAPPFLELKNS 1008
Query: 768 RHPVL-DTILLDNFVPNDTNLHAERE------YCQIITGPNMGGKSCYIRQVALIGIMAQ 820
RHP + T D+F+PND + ++ E C ++TGPNMGGKS +RQ L+ IMAQ
Sbjct: 1009 RHPCITKTFFGDDFIPNDIVIGSKDEESGSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQ 1068
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+G +VPA L +D ++TR+GASD I G STF EL+E S IL++ T SLV+VDEL
Sbjct: 1069 LGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDEL 1128
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGT+T DG AIA A + L E +C LF THY + + G+V H++ + ++
Sbjct: 1129 GRGTATFDGTAIASAVVKELAERIRCRTLFSTHYHSLVE-DYSHNGAVRLGHMACMVENE 1187
Query: 941 VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE-AEVSS 999
P S + +T+LYK + G S+GF A+LA +P I + A + E A +S
Sbjct: 1188 SEDP----SQETITFLYKFIEGACPKSYGFNAARLADIPEEVIQKGHRKAKEFEKATISL 1243
Query: 1000 RV 1001
R+
Sbjct: 1244 RI 1245
>gi|156549300|ref|XP_001600292.1| PREDICTED: probable DNA mismatch repair protein Msh6 [Nasonia
vitripennis]
Length = 1151
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 272/968 (28%), Positives = 427/968 (44%), Gaps = 129/968 (13%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP +Q LK+ + D +L +VG + + DA L + + F + P
Sbjct: 229 KQTPAMRQWWVLKSDHYDCVLFFKVGKFYELYHMDAVTGVNELSL-TFMRGEFAHSGFPE 287
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP-------FGRGLSALYTKAT-L 199
L+ G+KV ++QTE + + K G R + + TK T +
Sbjct: 288 IAYGRFSASLIERGYKVARIEQTENPEMMSQRCAKMGKTTKFDKVVKREICQISTKGTRV 347
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
A+D + S YL+ +++ I + GV ++ + GD
Sbjct: 348 YTAQDA----EASAPTSTYLLSIIEKQERNQNISS----------YGVCFIDTTIGDFNL 393
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
G+F D S L +L PA ++ + QT +L P + ++ F
Sbjct: 394 GQFQDDRCNSRLLTLLAHYPPAHVIYERNNLSQTTLKILNNLLPGA-MKEALQKEVQFWS 452
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD-----------LA 368
+ V L+E D N ED + P+ +E +N D LA
Sbjct: 453 STKVLNV--LHE---ADYFKNEEDSSFSWPK------GLEPYLNDGDSLGLTPLEEKQLA 501
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRS-----LSGSME----------MTLSANTLQQL 413
V AL + LK + L+ + F++ S + E M L A T+ L
Sbjct: 502 VNALGGCVYLLKNYQLDHQLLAQGRFKTYVPPDFSVNAEKSDGTKLAYNMVLDAMTITNL 561
Query: 414 EVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMG 473
VL N G+L+ +++ T +G RLLR WV P C +++I R +A++E+ +
Sbjct: 562 RVLGNE------GSLIKTLDNCCTAFGKRLLREWVCRPSCRKSVIVERQNAITELID--- 612
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI-FHRTATPSEF 532
N DV + V + L PD++R +++I A
Sbjct: 613 --------------NPDV----------VQEVRSKLSGLPDLERLLSKIHVQGNAAKLRN 648
Query: 533 IAVMQAILYAGKQLQQLHI-------DGEYREKVTSKTLHSALLKRLILTASSPAVIGKA 585
+AI++ G + I +G + + + S LI + G
Sbjct: 649 HPDGRAIMFEGPAYSKKTIVDFITALNG-FEDILKLIKKFSKFTNPLINKCTQLEPEGDF 707
Query: 586 AKLLSTVN--------KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMC 637
+L T++ +EA +G ++ +G E + K+ELDS +
Sbjct: 708 PELRETLDHFKTAFNHEEAKKEG----FIVPKHGVDREYDAVLMELADIKKELDSYLEKQ 763
Query: 638 RKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLA 695
RK G++ ++F IE+P + KV + S K RY++ E L +
Sbjct: 764 RKHFGVQ-IKFCGNDKKRFQIEVPESQIKKVGSGYELQGSRKGFKRYYTEESKDLLARQI 822
Query: 696 LANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVD 755
A E+ V + + +F Y ++ A +A LDCL +LA +R P D
Sbjct: 823 AAEEQKDKVLKDSNRKIFAKFSDQYDKWSNATYNIAVLDCLISLAEYARTCVTCIPTIFD 882
Query: 756 DHEP--VQIHICSGRHPVLDTILLDNFVPNDTNL-HAEREYCQIITGPNMGGKSCYIRQV 812
D + + I I G+HP I+ +NF+PNDT + AE I+TGPNMGGKS +RQV
Sbjct: 883 DTDDQGIFIEIREGKHPC---IVSENFIPNDTVIATAEAAPLIILTGPNMGGKSTLMRQV 939
Query: 813 ALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQ 872
LI IMAQ+G VPA+ L ++D I+TR+GA+D I G+STFL EL+E S IL++ T
Sbjct: 940 GLITIMAQIGCHVPATDCNLTLVDRIFTRLGANDDIMAGQSTFLVELSETSAILQHATKY 999
Query: 873 SLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYH 932
SLV++DELGRGTST+DG AIA + ++ L + +C LF THY + + K +V H
Sbjct: 1000 SLVLLDELGRGTSTYDGTAIAASVVEALTKI-QCRTLFSTHYHTLVE-DYKMNKNVTLAH 1057
Query: 933 VSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAK 992
++ + D S+++VT+LYK+ G S+GF A+LA +P S RA IA K
Sbjct: 1058 MACMVES---DDEDQISEENVTFLYKLSEGACPKSYGFNAARLAGVPASITKRAQSIATK 1114
Query: 993 LEAEVSSR 1000
LEAEV+ R
Sbjct: 1115 LEAEVNLR 1122
>gi|336172567|ref|YP_004579705.1| DNA mismatch repair protein mutS [Lacinutrix sp. 5H-3-7-4]
gi|334727139|gb|AEH01277.1| DNA mismatch repair protein mutS [Lacinutrix sp. 5H-3-7-4]
Length = 873
Score = 282 bits (722), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 263/947 (27%), Positives = 428/947 (45%), Gaps = 179/947 (18%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
KK TPL +Q +K KYPD LL+ VG + FG DA AA +LGI A +
Sbjct: 6 KKVTPLMKQYNAIKAKYPDALLLFRVGDFYETFGSDAVKAAGILGIILTKRGAGSETETE 65
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLE 200
A P LN ++ +LV AG +V + Q E P + RG++ L T
Sbjct: 66 LAGFPHHSLNTYLPKLVKAGERVAICDQLE-------DPKQTKTIVKRGVTELVTPG--- 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
V ++ ++N +C V FG +G+ ++ISTG+ +
Sbjct: 116 ----VALNDEVLQSKTNNFLCSV------------YFGKN---TIGIAFLDISTGEFLTS 156
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ N ++ + +L + SP+E+L+ SKQ R++ A
Sbjct: 157 QGNQEYI----DKLLQNFSPSEILV----SKQK--------------RLQFA-------- 186
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRH 378
EN GED H +E + D + + L +
Sbjct: 187 ----------ENFGEDF----------------HTFNLEDWVYQSDYSNETLLKHFNTKS 220
Query: 379 LKQFGLER----IMCLGASFRSLS----GSMEMTLSANTLQQLE-------VLRN----N 419
LK FG+E I+ G+ LS +E S + + + E +RN N
Sbjct: 221 LKGFGVENLTEGIIASGSILHYLSETQHNKLEHITSVSRIAEDEYVWMDRFTIRNLELYN 280
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
S + TLL++++ T++ G RLL+RW+ PL + I R + VS +
Sbjct: 281 STNNNAVTLLNVIDKTISPMGGRLLKRWLALPLKNVERIKQRHEVVSFLK---------- 330
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI 539
E + + + + S+G D++R I+++ +P E I + ++
Sbjct: 331 --------------AEKTIHQKIQNHIKSIG---DVERLISKVATGKVSPREVIQLKNSL 373
Query: 540 --LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA 597
+ K L + D E K+ TL + R K+ T+++EA
Sbjct: 374 ESIIPIKALSS-NCDNESL-KIIGDTLQGCDILR--------------DKIKQTLDEEAP 417
Query: 598 DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL 657
++L I+ G +E+ R+ S K LD+++ ++ G+ +L+ S + +
Sbjct: 418 --VNILKGKTIATGFSNELDELRELSASGKSYLDNMLKRESERTGITSLKIASNNVFGYY 475
Query: 658 IELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
IE+ K VP W + + RY + E+ ++ A E +T + + + +
Sbjct: 476 IEVRNTHKDKVPEEWIRKQTLVNAERYITEELKEYEAKILGAEERITTIEQKLFAELVLW 535
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
Y Q +A LDCL + L+ N+V P + ++ + I GRHPV++
Sbjct: 536 MNQYIKPVQQNAFLIAKLDCLCGFSQLANENNYVYPEIDNSYD---LEIIEGRHPVIEKQ 592
Query: 776 LL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
L + ++ N+ L + + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA A +
Sbjct: 593 LPIGEQYIANNVFLDRDTQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPAEKARIG 652
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
++D I+TR+GASD+I G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA
Sbjct: 653 LVDKIFTRVGASDNISMGESTFMVEMNETASILNNMSDRSLVLLDEIGRGTSTYDGISIA 712
Query: 894 YATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD 952
+A +YL EH K LF THY ++ ++ F + ++VS + +
Sbjct: 713 WAISEYLHEHPAKAKTLFATHYHELNEMTETFP-RIKNFNVSV-----------KELKDN 760
Query: 953 VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
V +L K+V G SE SFG VA+LA +P + RA I KLE SS
Sbjct: 761 VLFLRKLVEGGSEHSFGIHVAKLAGMPQQVLRRANKILKKLEQSHSS 807
>gi|317504405|ref|ZP_07962387.1| DNA mismatch repair protein MutS [Prevotella salivae DSM 15606]
gi|315664477|gb|EFV04162.1| DNA mismatch repair protein MutS [Prevotella salivae DSM 15606]
Length = 886
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 258/941 (27%), Positives = 440/941 (46%), Gaps = 149/941 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN---- 139
+K TP+ +Q +K K+P+ L++ G + +GEDA +AA +LGI +N
Sbjct: 3 VQDKGLTPMMKQFFSMKAKHPEALMLFRCGDFYETYGEDAVIAAGILGITLTKRNNSAEN 62
Query: 140 -FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLS 191
A P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 63 SVEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREQIKGKKGLTEMDKMVKRGIT 122
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
L T A D E+N+L V + GK G+ ++
Sbjct: 123 ELVTPGV--AMTDTVLNYK----ENNFLAAV-----HFGK-----------ASCGISFLD 160
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
ISTG+ + GE ++ E +L + SP E+L + + E+ Y G
Sbjct: 161 ISTGEFLTGEGTYDYV----EKLLGNFSPKEVLYNRDHKQDFER----YFG--------- 203
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
S+ C M E S + + G G+ +M + +
Sbjct: 204 -SKHCVF-------------EMDEWVFSEQNARQKLLKHFGTKSLKGFGVEHMKNGIIAG 249
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGTLLH 430
A+ +++L+ +I + S + + L T++ LE++ +GS +LL+
Sbjct: 250 GAI-LQYLELTQHTQINHI-TSLSRIEEDKYVRLDRFTIRSLELIAPMQEDGS---SLLN 304
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++ T+T G R+LRRW+ PL D I RLD V D
Sbjct: 305 VIDRTVTAMGGRMLRRWLVFPLKDVAPIKERLDIV------------------------D 340
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ-- 548
+P F ++ L +G D++R ++++ +P E + + A L A + +++
Sbjct: 341 YFFQKPSFRQLVDEQLHRVG---DLERIVSKVAVGRVSPREIVQLKNA-LDAVRPIKEAC 396
Query: 549 LHIDGEYREKVTSKTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L+ + E ++V + +K I + P ++ K GD
Sbjct: 397 LYSENEALKRVGEQLNLCESIKTRIEKEIQPDPPQLVAK---------------GD---- 437
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
+I++G E+ R ++ K+ L + + G+ +L+ F +V G + +E+
Sbjct: 438 -VIADGYNKELDELRTMRRNGKDYLLKIQEDEAEATGILSLKVGFNNVFG--YYLEVRNT 494
Query: 664 FK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
FK VP W + + + RY +PE+ +++ A+E++ + ++ + +
Sbjct: 495 FKNKVPETWIRKQTLAQAERYITPELKEYEEKILGADEKIMALEARLFNELVLAMQDFIP 554
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DN 779
+ Q LA +DCL + A +S ++RP +DD + + I GRHPV++T L ++
Sbjct: 555 QIQINATLLARVDCLLSFAKISEENTYIRPQ-IDDSDVLDIR--QGRHPVIETQLPIGEH 611
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
+VPND L +++ +ITGPNM GKS +RQ ALI ++AQVG FVPA A + ++D I+
Sbjct: 612 YVPNDVYLDTQKQQVMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAERASIGLVDKIF 671
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR+GASD++ G STF+ E+ EA+ IL N + +SLV+ DELGRGTST+DG++IA+A ++Y
Sbjct: 672 TRVGASDNLSLGESTFMVEMTEAANILNNVSPRSLVLFDELGRGTSTYDGISIAWAIVEY 731
Query: 900 LLEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLY 957
L E K LF THY ++ +++ F + Y+VS + D V +L
Sbjct: 732 LHEQAKARARTLFATHYHELNEMEKNFV-RIKNYNVSV-----------KEVDGKVIFLR 779
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
K++ G SE SFG VA++A +P S + RA I +LEA+ S
Sbjct: 780 KLMRGGSEHSFGIHVAEIAGMPRSIVKRANTILKELEADNS 820
>gi|347531827|ref|YP_004838590.1| DNA mismatch repair protein MutS [Roseburia hominis A2-183]
gi|345501975|gb|AEN96658.1| DNA mismatch repair protein MutS [Roseburia hominis A2-183]
Length = 874
Score = 282 bits (721), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 261/924 (28%), Positives = 429/924 (46%), Gaps = 148/924 (16%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
QQ ++ K +Y D +L +G + F EDAE+ +K L G ++ IP
Sbjct: 3 QQYLQTKEEYKDCILFYRLGDFYEMFFEDAELVSKELELTLTGKNCGMEERAPMCGIPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT---LEAAEDV 205
+ ++ +LV G KV + +Q E + G R + + T T ++A ++
Sbjct: 63 AVEGYLNKLVANGHKVAICEQVEDPKLAK------GLVKREVIRIVTPGTNLDMQALDE- 115
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
++NY++C+V D R GV ++STGD E +
Sbjct: 116 --------SKNNYIMCIV------------YLAD----RYGVSIADVSTGDYYVTEVDS- 150
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
L + SP+E++ + S V +E I AL E
Sbjct: 151 --ERKLFDEITKFSPSEIICNESFY-------------MSGVDIEDLRHRLKITIYAL-E 194
Query: 326 VMSLYENMGEDTL-SNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ + E TL ++ + ++++ ++ + +A AL + ++ L
Sbjct: 195 TWYFGDELAETTLLTHFKVKSLEALGLADYDCGM--------IAAGALLKYLYETQKNDL 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I + S M + ++T + LE++ + G+LL +++ T T G+RLL
Sbjct: 247 NNI----SVIHPYSTGKYMIIDSSTRRNLELVETLREKQKRGSLLWVLDKTKTAMGARLL 302
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
R +V PL D+ I R DA+ E+ QH I + L+
Sbjct: 303 RSYVEQPLIDKAEIEKRQDAICEL-------------NQH-------VITREELREYLNP 342
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQ---QLHIDGEYREKV 559
+ D++R ITR+ + TA P + IA +I L K L Q + GE RE +
Sbjct: 343 IY-------DLERLITRVTYLTANPRDLIAFRSSIAMLPPIKSLLGDFQCELLGEIREDM 395
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
+ AL+ R I+ +V D G +I +G +V +
Sbjct: 396 DTLEELCALIDRAIMEEPPISV---------------RDGG------LIKDGYNEDVDKY 434
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTK 677
RKA K L L R++ G++NL+ + +E+ ++K VP + + +
Sbjct: 435 RKAKTEGKTWLAELEAKEREKTGIKNLKIKYNKVFGYYLEVTNSYKDLVPDYFMRKQTLA 494
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE---FQAAVQALAALD 734
RY +PE L L+ + L E+ + +D F + AE Q +A+A LD
Sbjct: 495 NAERYITPE-LKELEDMILGAEDKLVTLE--YDLFCEVRSTIAAEVVRIQRTAKAVAGLD 551
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREY 793
+LA ++ N+ RP +E I I GRHPV++ ++ D F+ NDT L
Sbjct: 552 VFVSLALVADQNNYCRPKI---NENGIIDIKGGRHPVVEKMINNDMFIDNDTYLDNGNHR 608
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS Y+RQ ALI +MAQ+GS+VPA+SA++ ++D I+TR+GASD + G+S
Sbjct: 609 ISIITGPNMAGKSTYMRQTALIVLMAQLGSYVPAASAKIGIVDRIFTRVGASDDLASGQS 668
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFV 911
TF+ E+NE + ILRN T+ SL+I+DE+GRGTST+DG++IA+A ++++ K LF
Sbjct: 669 TFMVEMNEVANILRNATSNSLLILDEIGRGTSTYDGLSIAWAVVEHISNPKLLGAKTLFA 728
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ K +V Y V+ + K D D+ +L K+V G ++ S+G +
Sbjct: 729 THYHELTELEGKL-NNVNNYCVA----------VKEKGD-DIVFLRKIVKGGADKSYGIQ 776
Query: 972 VAQLAQLPPSCISRATVIAAKLEA 995
VA+LA +P S I+RA I +L A
Sbjct: 777 VAKLAGVPDSVIARAKEIVEELSA 800
>gi|290999909|ref|XP_002682522.1| DNA mismatch repair protein msh6 [Naegleria gruberi]
gi|284096149|gb|EFC49778.1| DNA mismatch repair protein msh6 [Naegleria gruberi]
Length = 1998
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 246/937 (26%), Positives = 430/937 (45%), Gaps = 115/937 (12%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP+EQQ K + D L+ + G + + EDA++A K + N A +P
Sbjct: 1074 TPMEQQYWATKKNHMDKLVFFKKGKFYELYEEDADIAKKEFDLKITERINMRMAGVPESS 1133
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAA----IKAHGPGKAGPFGRGLSALYTKATLEAAEDV 205
+ ++ ++ G+ V+QTET K + GR + + T AT+ + +
Sbjct: 1134 FLNYAKKFISLGYDCLRVEQTETVEERNERKKEKKTASSCVGREICDITTIATITDLDFI 1193
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
++G + YL+CV +D R G+ ++IS G D
Sbjct: 1194 S--DNG----NQYLLCVKED--------------IMHARYGITFLDISMDAFYIGFIEDD 1233
Query: 266 FLRSGLEAVLLSLSPAELLL--GQPLSKQTEKMLLAYAGPASNVRV---------ECASR 314
R+ ++ +++P+E+++ GQ S QT+K + N RV E A +
Sbjct: 1234 THRNQFNTLIHTINPSEIIIEKGQT-SVQTKKNI-------DNKRVVIREKKTCNELAQK 1285
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
+ G A+V + ED +ED AI DL + +
Sbjct: 1286 E--FTGFPTADVTKYF---LEDLPHISED-------------AIVKQFLDNDLVMSSFGA 1327
Query: 375 TIRHLKQFGLERIMCLGA-SFRSLSGSME---MTLSANTLQQLEVLRNNSNGSEYGTLLH 430
+ +LK E ++ F G M+ + L TL L+V N++ G++ GTLL
Sbjct: 1328 ALFYLKYLRKEDVLLSKTIKFSLYDGKMDTGHLILDGQTLTNLDVKVNSNTGTKEGTLLS 1387
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
++++T+T G R+L W+T PL + I+ R DA+ +I
Sbjct: 1388 LVDNTVTAMGRRMLENWLTRPLKNSEEINDRYDAIEDIMS-------------------- 1427
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV--------MQAILYA 542
I EPQ S+ L D++R + ++ + + IA ++ L+A
Sbjct: 1428 -IIEEPQ------SIRDQLSNIKDLERCLHCLYRESRKVQKEIAFDTSTSKRRVKPYLHA 1480
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
+ L+ I + +K +++++S++LKR+I + + + + ++++ A +
Sbjct: 1481 LESLRAGVIIVQGLQKY-AESVNSSILKRVINIDNLDEIDNVLSTFENQIDQQKALSEGI 1539
Query: 603 LNLMIISNG-----QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL 657
+ + S G EVA K VQ ++ + + ++ N + + I
Sbjct: 1540 VERIDGSLGPEYEKYLEEVAEIDKEVQDFIAKVKEEVPSAKMKIDKGNTKIVKQWTIETE 1599
Query: 658 IELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+++ + +P + +KT ++ P + L + L ++ + + L EF
Sbjct: 1600 VKVELD-NMPDGFKSEKKNQKTRKWSHPFLDKKLTESKLRQTKMDDIRENQYREILNEFS 1658
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y ++ +++++ LDCL +L T S + + RPV + + + RHP + T
Sbjct: 1659 TYDQYWKTIMRSISELDCLLSLYTTSSQEGYCRPVILPFKNKPVLKVTKMRHPTVRTT-- 1716
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
F+PND + A+ ++TGPNMGGKS +R + IMAQ+G FVPA + EL ++D
Sbjct: 1717 SGFIPNDIFMGADDATTLLVTGPNMGGKSTILRSSCIAVIMAQIGCFVPAEACELTLIDR 1776
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GA+D I G STF+ EL E S I+RN T++SLVI+DELGRGTSTHDG AIA +
Sbjct: 1777 IFTRIGANDRILAGESTFMVELLETSNIVRNATSRSLVILDELGRGTSTHDGYAIANSVA 1836
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLY 957
Y+ + C+ +F THY ++ + + K S+ Y + G + DV +LY
Sbjct: 1837 QYMADVVGCLCMFSTHYYELTE-ELKHHPSIDFYQMECEVEKDETGRI-----TDVIFLY 1890
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ GV E S+G +VA+ A +P S + RA+V+A + E
Sbjct: 1891 QFARGVCEKSYGIQVAKKAGVPQSIVDRASVVAEEFE 1927
>gi|430747225|ref|YP_007206354.1| DNA mismatch repair protein MutS [Singulisphaera acidiphila DSM
18658]
gi|430018945|gb|AGA30659.1| DNA mismatch repair protein MutS [Singulisphaera acidiphila DSM
18658]
Length = 865
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 276/931 (29%), Positives = 425/931 (45%), Gaps = 157/931 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASI 145
TP+ QQ ELK + PD LL+ +G + FGEDAE AA +LG+ A
Sbjct: 7 TPMMQQYRELKARDPDALLLFRMGDFYEMFGEDAERAAPLLGLALTARDKGPNAVPMAGF 66
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATL--EAA 202
P L ++ +LV AG + V +Q E P +A G R + + T TL EA
Sbjct: 67 PHPALESYLAKLVQAGQRAAVCEQVED-------PKQAKGLVKREVVRVVTPGTLTDEAL 119
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
D +NYL VV+ G +LG+ VE+STG
Sbjct: 120 LDPKS--------ANYLAAVVESSG----------------KLGLAWVELSTGRFSL--- 152
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
G R+ L + L+PAE L+ + L + L + GP R S D F+
Sbjct: 153 -TGVSRTELTDEMARLNPAETLVSEISLDSPWVRTLRTHLGPTITSR---PSWD-FVSEQ 207
Query: 322 ALAEVMSLYENMGEDTLSNN--EDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
A +L E+ G TL+ +DQ +V G AL +R
Sbjct: 208 ARN---TLNEHFGITTLAGFGIDDQAPEVAAAG------------------ALVAYLRDT 246
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
++ L + L R+ + L T + LE+ R +G G+LL +++ + T
Sbjct: 247 QKSSLGHLTRLTPYRRADV----LALDEMTRRSLELTRTLRDGKRDGSLLQVIDRSCTPM 302
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G+RLL W+T PL I+ R +AV E+ +G
Sbjct: 303 GARLLADWLTSPLTHLEPIAERHEAVGEL---LGDS------------------------ 335
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---------MQAILYA--GKQLQQ 548
+ S + +SLG++ D++R R+ ATP + A+ ++A L A K+L Q
Sbjct: 336 LLRSDLRSSLGQAYDLERLAARVGTGRATPRDLAALARTLALLPKIRARLTARSSKRLNQ 395
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
L E +V S + +AL+ LT +I + DL L I
Sbjct: 396 LEAALELCPEVRS-AIEAALVDDPPLTIKEGGLIREGY------------HPDLDELREI 442
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKV 666
+ G S +A+ QS + ++ G+ NL+ F V G I KV
Sbjct: 443 ARGGKSWIAK----FQSEQV----------RRTGIANLKVGFNKVFGYYIEISHAQGSKV 488
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P ++ + + K RY +PE+ D++ A + + + + A
Sbjct: 489 PPDFIRKQTVKNAERYITPELKEYEDKVLRAEDRANELEYELFTTLRDRVAAEAPRLIQA 548
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDT 785
LA +D L ALA L+ + RP V EP + I GRHPVLD ++ +FVPNDT
Sbjct: 549 GAVLAQVDVLSALAELAARHGYCRPEMV--AEPA-LEIEVGRHPVLDVLMPPGDFVPNDT 605
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L +ITGPNM GKS +IRQVAL+ I+AQ+GSFVPA A + V+D ++ R+GA+
Sbjct: 606 RLSPNDGTIVVITGPNMAGKSTFIRQVALLTILAQIGSFVPARRARIGVVDRLFARVGAT 665
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D + +G+STF+ E+ E + IL N TA SLVI+DE+GRGTST DG+++A+A ++L +
Sbjct: 666 DELSRGQSTFMVEMTETANILNNATAHSLVILDEIGRGTSTFDGISLAWAITEHLHDVVG 725
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
C LF THY ++ +++ K + +V+ +S+ ++ +L+++VPG ++
Sbjct: 726 CRTLFATHYHELVELE-KTKPRLRNANVAV-----------RESEGEIVFLHRIVPGGAD 773
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
S+G VA+LA +P + R+ I A LE +
Sbjct: 774 QSYGIHVARLAGVPAPVLERSREILAFLEKQ 804
>gi|424900030|ref|ZP_18323572.1| DNA mismatch repair protein MutS [Prevotella bivia DSM 20514]
gi|388592230|gb|EIM32469.1| DNA mismatch repair protein MutS [Prevotella bivia DSM 20514]
Length = 879
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 274/957 (28%), Positives = 447/957 (46%), Gaps = 147/957 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------FMTASIPT 147
+Q +K K+PD LL+ G + + +DA AAKVLGI +N A P
Sbjct: 3 KQFFSMKAKHPDALLLFRCGDFYETYHDDAIDAAKVLGITLTKRNNGGNSGEIAMAGFPH 62
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG--PFG----RGLSALYTKATLE 200
L+ ++ +L+ AG +V + Q E K GK G P RG++ L T
Sbjct: 63 HALDTYLPKLIRAGKRVAICDQLEDPKKKREELKGKKGLSPMDKMVKRGITELVTPG--- 119
Query: 201 AAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
V G++ E+N+L V + GK GV ++ISTG+ +
Sbjct: 120 ----VAMGDNVLNYKENNFLAAV-----HFGK-----------QACGVSFLDISTGEFLT 159
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
GE ++ E ++ S SP E+L + K+ E ++ D ++
Sbjct: 160 GEGTYDYV----EKLIGSFSPKEILYDRAYKKEFETHF--------GTKLCTFEMDDWVF 207
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
A L ++ G L + V N A IM +L IRH+
Sbjct: 208 TEQTAN-QKLLKHFGTANL-----KGFGVDHLHNGIIAAGAIMQYLELTQHT---QIRHI 258
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ + + + T++ LE++ ++ E +LL+++++T+T
Sbjct: 259 ------------TALTRIEEEKYVRMDRFTIRSLELV--STMNDEGTSLLNVIDNTITPM 304
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G R+LRRW+ PL I RLD V E +H + + QF+
Sbjct: 305 GGRMLRRWMVFPLKTVKPIEERLDVV-------------EYFFKHQDFRDTIN---EQFH 348
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
R D++R I+++ +P E + + A+ K +Q + Y E
Sbjct: 349 -----------RIGDLERIISKVAVGRVSPREVVQLKNAL----KAIQPVKTSCLYAE-- 391
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
+K L+ + ++L L S + + + + + A++GD II+ G E+
Sbjct: 392 -NKVLNR-IGEQLNLCES---LRNRIEQEIQNDPPQLANKGD-----IIAFGYNQELDEL 441
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFK--VPLNWAKVNS 675
R KE L + ++ G+ +L+ F +V G + +E+ FK VP W + +
Sbjct: 442 RTIRDHGKEYLLQIQEREAERTGINSLKVGFNNVFG--YYLEVRNTFKDNVPEEWVRKQT 499
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
+ RY + E+ D++ A+E + + + +++ + + Q +A LDC
Sbjct: 500 LAQAERYITQELKEYEDKILGADERILALEGKLFMELIRDMQEFIPQIQINATLVAHLDC 559
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L + S ++VRPV VDD E + I GRHPV++T L + +VPND L +R+
Sbjct: 560 LLSFTRASEEHHYVRPV-VDDSEVLDIK--QGRHPVIETQLPLGEQYVPNDVLLDNDRQQ 616
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNM GKS +RQ ALI ++AQ+G FVPA A + ++D I+TR+GASD+I G S
Sbjct: 617 IMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAERARVGLVDKIFTRVGASDNISVGES 676
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFV 911
TF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA+A ++YL E K LF
Sbjct: 677 TFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPRAKARTLFA 736
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ F G + Y+VS + + + +L K+ G SE SFG
Sbjct: 737 THYHELNEMEKNFHG-IKNYNVSV-----------KEVNGKIIFLRKLEKGGSEHSFGIH 784
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVS 1028
VA +A +P S + RA VI ++LEA+ Q SA + + KL ++++E M +S
Sbjct: 785 VADIAGMPRSIVKRANVILSELEAD---NAQVGSAGKTAIGKL----EQSREGMQLS 834
>gi|408671884|ref|YP_006871632.1| DNA mismatch repair protein mutS [Emticicia oligotrophica DSM
17448]
gi|387853508|gb|AFK01605.1| DNA mismatch repair protein mutS [Emticicia oligotrophica DSM
17448]
Length = 875
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 259/920 (28%), Positives = 435/920 (47%), Gaps = 130/920 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTA 143
K TPL +Q ++K KYP +L+ VG + FG+DA A+K+LGI +N A
Sbjct: 14 KETPLNRQYNQIKAKYPGAMLLFRVGDFYETFGDDAIRASKILGIVLTRRNNGGAQEELA 73
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAA 202
P L+ ++ +LV AG +V + Q E P A G RG++ L T +
Sbjct: 74 GFPHHSLDTYLPKLVRAGERVAICDQLE-------DPSTAKGIVRRGVTELVTPG-VSFN 125
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
++V + ++NYL ++ +N FG F +++STG+ + E
Sbjct: 126 DNVLNHK-----QNNYL-------ASIHFAKNDYFGVSF--------LDVSTGEFLTTEG 165
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
N ++ + +L S +P+E+L K+ A G N E D
Sbjct: 166 NAAYI----DKLLQSFAPSEVLY----CKRNRTDFHALFGEKFN---EFTFEDW------ 208
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
+ + G + L N+ +V GI NMP+ + A + +R+L
Sbjct: 209 -----AYKFDFGYNLLLNH----FNVTTLKGF-----GIENMPE-GITAAGVILRYLSDT 253
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
+ + + R L + L T++ LE++ +G L+ +++ T+T G+R
Sbjct: 254 EHKEMGHISRITR-LDEDKYVWLDKFTIRNLELVFAQHDGG--VPLIQVLDQTITPMGAR 310
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LLR+W+ PL +R+LI RLD V E ++DE ++E L
Sbjct: 311 LLRKWLVLPLKERSLIQERLDTV-------------EFFVKNDE------VLEQ-----L 346
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
S +L +G D++R I+++ R P E + +A+ +QL I G R + K
Sbjct: 347 SLLLKPIG---DLERLISKVAVRRINPRELGQLKKALGQIEPIKKQLEI-GSERFPILQK 402
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKA 622
L+ ++ + + L +QG++ I +G +E+ K
Sbjct: 403 YLNQ--------LTDCKYLVERIERELRDDAPVVMNQGNM-----IKSGVDAELDELHKI 449
Query: 623 VQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTI 680
S K+ L + N + G+ +L+ + V G + KVP W + +
Sbjct: 450 AFSGKDFLIEIQNRESARTGIPSLKISYNKVFGYYLEVSNAHKSKVPTEWIRKQTLVNAE 509
Query: 681 RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA 740
RY + E+ +++ A ++ + ++ + + A+ Q + ++ LD L + A
Sbjct: 510 RYITEELKVYEEKILTAESKIFEIEFRIFNDLVIAANEFVAQIQQNARVISILDALSSFA 569
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQIIT 798
+++ N+ +PV D+ ++I GRH V++ L + ++PND L + + IIT
Sbjct: 570 KVAQRNNYCKPVVSDNK---VLNIKEGRHAVIEQQLPLGEAYIPNDLYLDDQTQQIIIIT 626
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNM GKS +RQ ALI +MAQVGSFVPA SAEL ++D I+TR+GASD++ +G STF+ E
Sbjct: 627 GPNMAGKSALLRQTALIVLMAQVGSFVPAQSAELGIVDKIFTRVGASDNLSRGESTFMVE 686
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVLFVTHYPK 916
+ E + IL N + +SL+I+DE+GRGTST+DGV+IA++ +YL H+K LF THY +
Sbjct: 687 MTETASILNNLSDRSLIIMDEIGRGTSTYDGVSIAWSIAEYLHNHQKYKPWTLFATHYHE 746
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ + F G + ++VS + + V +L K+ G SE SFG VAQ+A
Sbjct: 747 LNQLAEDF-GRIKNFNVSV-----------KEVNNKVVFLRKLKEGGSEHSFGIHVAQIA 794
Query: 977 QLPPSCISRATVIAAKLEAE 996
+P + + RA I LE +
Sbjct: 795 GMPQAVVLRANEILQHLEKD 814
>gi|373456284|ref|ZP_09548051.1| DNA mismatch repair protein mutS [Caldithrix abyssi DSM 13497]
gi|371717948|gb|EHO39719.1| DNA mismatch repair protein mutS [Caldithrix abyssi DSM 13497]
Length = 884
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 255/928 (27%), Positives = 420/928 (45%), Gaps = 150/928 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT-- 147
TPL +Q + +K Y DVLL+ +G + F EDA++ ++ LGI + TA +P
Sbjct: 13 TPLMEQYLRIKADYKDVLLLYRMGDFYETFYEDAKILSRTLGIALTKRAHGKTADVPLAG 72
Query: 148 ---FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
L+ ++ +L+NAG +V + +Q E P A + + +E A
Sbjct: 73 FPYHALDNYLPKLLNAGLRVAICEQVE-------DPKTA-------KGVVKREVVEIASP 118
Query: 205 VGGGEDGC--GGESNYLVCV-VDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
D +NYLV V +++D G+ ++STG + E
Sbjct: 119 GVTLSDKLLDSRSNNYLVAVHLEEDI-----------------CGIAVADVSTGSFLVAE 161
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
F PA+ LL Q + Q ++L+A ASR
Sbjct: 162 F-----------------PAQNLLEQLIRYQPREILVA------------ASR------- 185
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMD--------VPEQGNHRSAIEGIMNMPDLAVQALA 373
L + +L N L+ ED D + H G+ +M + A
Sbjct: 186 -LDALQTLIANHLNALLTKREDWLFDRNYMYELLLQHFKTHSLKGFGVEDM-QAGIIAAG 243
Query: 374 LTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
+ I +L++ R+ + ++ S M L +T + LE+ + S G TLLH ++
Sbjct: 244 VVIHYLQENYKTRLEHF-IHLQRVNLSRYMVLDESTRRNLEISESISGGGVRNTLLHFID 302
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T+T G+RL ++W+ PL D I+ RLD VSE+ +G E +
Sbjct: 303 FTITPMGARLFKQWIQQPLLDMEEINHRLDIVSEL---VGDAPLREQLA----------- 348
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
L + D +R + +I A + +L G+ L+Q+
Sbjct: 349 -------------AELKQIFDTERLLGKIVTNRANARD-------VLNLGQSLKQIVPIK 388
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
++ T TL + IL + + + + +E II G
Sbjct: 389 AIIDQTTCDTLKAHFQSFQILDSLTEKIDRAIVENPPITLQEGG---------IIRAGYH 439
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA--NFKVPLNWA 671
+E+ R + K+ L + R++ G+ L+ + IE+ K+P +
Sbjct: 440 AELDELRAISEQGKDWLLAYQQRERERTGISTLKVNYNKVFGYYIEVTNVHKDKIPPEYV 499
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + R+ + E+ D++ A E++ + + +E G Y Q + +A
Sbjct: 500 RKQTLVNAERFITQELKEWEDKILGAEEKINELEYRLFQEIREEVGRYVEPIQLNSRLIA 559
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHA 789
LDC +LA + N+VRP +DD ++I GRHPV++ L ++F+ ND L
Sbjct: 560 ELDCFLSLAQAAIENNYVRPE-IDDSRALEIR--EGRHPVVEKTLPPGEDFIANDAYLDP 616
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNM GKS ++RQV LI +MAQ+GS+VPA+ A + ++D I+TR+GASD++
Sbjct: 617 DSEQIWIITGPNMAGKSTFLRQVGLIVLMAQIGSYVPAAKARIGIVDRIFTRVGASDNLA 676
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCM 907
G STFL E+NE + IL N T +SL+++DE+GRGTST DG++IA+A +Y+ +C
Sbjct: 677 SGESTFLVEMNETANILNNATPRSLILLDEIGRGTSTFDGLSIAWAVAEYIYREPRLRCK 736
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ ++ + + Y+V+ ++ DQ V +L K+VPG S++S
Sbjct: 737 TLFATHYHELTELALLYP-RIKNYNVA----------VEEWKDQ-VIFLRKIVPGGSDNS 784
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEA 995
+G VAQ+A LP I+RA I LEA
Sbjct: 785 YGIYVAQMAGLPAPLIARAKEILTNLEA 812
>gi|300870934|ref|YP_003785805.1| DNA mismatch repair protein MutS [Brachyspira pilosicoli 95/1000]
gi|300688633|gb|ADK31304.1| DNA mismatch repair protein, MutS [Brachyspira pilosicoli 95/1000]
Length = 896
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 249/948 (26%), Positives = 454/948 (47%), Gaps = 134/948 (14%)
Query: 71 HTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL 130
T + S + +K TP+ +Q E+K KY D +L+ +G + F EDA++ +++L
Sbjct: 3 ETFFSLEESSENSPKEEKLTPMMRQYKEIKDKYSDSILLFRMGDFYEVFFEDAKIVSELL 62
Query: 131 GIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRG 189
G+ N A +P ++ ++ +LV +G K+ + Q E P A G R
Sbjct: 63 GLTLTKRANVPMAGVPYHAIDNYLSKLVKSGKKIAICDQME-------DPKTAKGIVKRD 115
Query: 190 LSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
++ + T T+ + + + NYL ++ V K N V +
Sbjct: 116 VTQVITPGTIAENKYLESKSN------NYLASII-----VSKSENNV---------AIAI 155
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAV---LLSLSPAELLLGQPLSKQTEKMLLAYAGPASN 306
+ISTG++ EF + + L+ + ++ P E++ + S + K++ SN
Sbjct: 156 CDISTGELYVTEFENNNTKDFLDEICEEIIRFYPKEIMTVE--SVKESKIIKEIQNRFSN 213
Query: 307 VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
+ A + + ++ + + ED+++ V G
Sbjct: 214 IFFSTTPNYTAEYSYAYKLLTNHFKTISLKSFGI-EDKHLIVSLLG-------------- 258
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
+L ++ L + LE I + R S MTL T+ LE+L N +
Sbjct: 259 ----SLIYYLQELSKTSLEHISNIKLYNRKDS----MTLDYATISSLEILETIRNDNNKM 310
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
TL ++ T T G+R L+R + PL D + I+ RL+ V ++
Sbjct: 311 TLFDTIDKTKTSMGARYLKRIIVEPLLDIDEINKRLNNV-----------------EYFY 353
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
KN +F Y + +L+ +G DI+R +++ P E +++ + + + + +
Sbjct: 354 KNQ-------KFMYRIMDMLSDVG---DIERLASKLALGRINPKELVSLKRFLFSSLQII 403
Query: 547 QQL---HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+L + + E++ + + L++R IL P ++ ++GD
Sbjct: 404 TELVLNNFNDVNFEEIGDIKIITDLIERAIL--EDPKIV--------------LNEGD-- 445
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PA 662
II + ++ + +A + + + L N + + NL+ + I + IE+ +
Sbjct: 446 ---IIKDDYDEKLKKYNEARREGRTWISELENEYKSITSINNLKIRYNNVIGYYIEITKS 502
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGG 718
N VP ++ K + + RY + +++ + ANE+ + +D F++ +
Sbjct: 503 NISLVPKDFIKRQTLVGSERYTTSKLMEYEKTINEANEKSYAL---EYDIFIEVRNKVNE 559
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL- 777
Y + ++ +D +LA L+ +N+ +P+ + I I GRHPV++ L
Sbjct: 560 YLTSILKMAKIISVIDVYASLACLAAEENYTKPI---ITDDGIIDIKEGRHPVVEANLKN 616
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
++F+ NDT L + E+ IITGPNM GKS Y+RQ ALI ++AQ+GSFVPA SA++ ++D
Sbjct: 617 ESFIANDTYLDNKNEHLLIITGPNMSGKSTYLRQTALIVLLAQIGSFVPAKSAKISIVDR 676
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GASD+I +G STFL E+NE +YIL +CT +SLVI+DE+GRGTST+DG++IA+A +
Sbjct: 677 IFTRVGASDNIAKGESTFLVEMNETAYILNHCTDRSLVIMDEIGRGTSTYDGLSIAWAIV 736
Query: 898 DYLL--EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
+YL+ E+KK LF THY ++ ++ + + ++KV+ ++ D+ + +
Sbjct: 737 EYLVNEENKKSKTLFATHYHELTMLE----------DLEGVKNYKVL--VEEYKDE-IIF 783
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+ KV+ G +ESS+G A++A P I RA+ I KLE E +V+N
Sbjct: 784 MKKVIEGAAESSYGIYAAKIAGAPHKVIQRASEILKKLENEAGIQVEN 831
>gi|315225135|ref|ZP_07866952.1| DNA mismatch repair protein MutS [Capnocytophaga ochracea F0287]
gi|420158716|ref|ZP_14665532.1| DNA mismatch repair protein MutS [Capnocytophaga ochracea str. Holt
25]
gi|314944818|gb|EFS96850.1| DNA mismatch repair protein MutS [Capnocytophaga ochracea F0287]
gi|394763532|gb|EJF45627.1| DNA mismatch repair protein MutS [Capnocytophaga ochracea str. Holt
25]
Length = 860
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 265/949 (27%), Positives = 426/949 (44%), Gaps = 196/949 (20%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----A 143
K TPL +Q ++K+KYPD LL+ VG + FGEDA AA L I +N A
Sbjct: 3 KETPLMKQYNQIKSKYPDALLLFRVGDFYETFGEDAVKAAHTLDIVLTNRNNGTERSELA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
P +N ++ +LV AG++V + Q E + G RG++ L T
Sbjct: 63 GFPYHSINTYLPKLVKAGYRVAICDQLEDPKLVK------GIVKRGVTELVTPG------ 110
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
V +D +SN + V +GK G GV +++STG+ + + +
Sbjct: 111 -VALNDDILQSKSNNFLASV----WLGK--QGC---------GVAFLDVSTGEFLVAQGD 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ + +L + P+ELL+ + K+
Sbjct: 155 KTYI----DKLLQNFRPSELLVAKHQKKE------------------------------- 179
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRHLKQ 381
E+ G+D H +E + D A Q L LK
Sbjct: 180 -----FAEHFGDDF----------------HCFYLEDWVFKDDYAQQVLTKHFQTNSLKG 218
Query: 382 FGL----ERIMCLGASFRSLSGSME-----------------MTLSANTLQQLEVLRNNS 420
FG+ E I+ GA LS + + L T++ LE+ N+
Sbjct: 219 FGVDELTEAILTAGAILYYLSETQHHQLQHITAIQRIAEEAYVWLDKFTIRNLELYAGNT 278
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
S +LL +++ TL+ GSR L+RW+ PL +LD + R
Sbjct: 279 TPS--VSLLDVIDKTLSPMGSRTLKRWLALPL-------KKLDKI----------RQRHE 319
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
V + K+ DV L V +L R DI+R I+++ P E +
Sbjct: 320 VVDYFLKHIDV----------LEQVKIALSRMGDIERLISKVATLKINPREVV------- 362
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTAS--SPAVIGK--------AAKLLS 590
QL E H L+K+L L ++ S ++G +A++
Sbjct: 363 -------QLRASLE----------HIPLIKQLCLASANESLTLLGDKLHSCEQLSARIAE 405
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
T+N++A ++ I+ G +E+ R S K LD L+ ++ G+ +L+ +
Sbjct: 406 TLNEDAP--VNIAKGNAIAKGFSAELDELRGLSHSGKSYLDDLLLRESQRTGIPSLKIDN 463
Query: 651 VSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+ + IE+ K VP +W + + RY + E+ ++ A E++ ++ ++
Sbjct: 464 NNVFGYYIEVRNTHKDKVPHDWIRKQTLVNAERYITGELKEYEAKILGAEEKIALLEQSL 523
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGR 768
+ + Y + Q + LDCL ATL+ N+ RP + +E I I GR
Sbjct: 524 YAELIAFISEYIGQVQTNATLIGQLDCLCGFATLAMENNYHRP---EMNEGYAIDIKDGR 580
Query: 769 HPVLDTILLDN--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
HPV++ L ++ ND L ER+ +ITGPNM GKS +RQ ALI ++AQ+GSFVP
Sbjct: 581 HPVIEKQLPVGTPYIANDVYLDRERQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVP 640
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
A++A+L ++D I+TR+GASD+I G STF+ E+NEA+ IL N + +SLV++DE+GRGTST
Sbjct: 641 AATAQLGIVDKIFTRVGASDNISMGESTFMVEMNEAALILNNISDRSLVLLDEIGRGTST 700
Query: 887 HDGVAIAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPM 945
+DG++IA+A +YL EH K LF THY ++ ++ +F + Y+VS
Sbjct: 701 YDGISIAWAIAEYLHEHPSKAKTLFATHYHELNEMSEQFE-HIKNYNVSV---------- 749
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V +L K+ G S SFG VA++A +P I +A + KLE
Sbjct: 750 -KETKDSVLFLRKLTEGGSAHSFGIHVAKMAGMPQYVIQKANKMLKKLE 797
>gi|392300210|gb|EIW11301.1| Msh6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1242
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 263/1026 (25%), Positives = 441/1026 (42%), Gaps = 151/1026 (14%)
Query: 11 RFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKKPKLSP 70
R + P +Q +A+S +S + + V A+R+ PK+ P+ P
Sbjct: 251 RSYTPSHSQPSATSKSSKFNKQNE---ERYQWLVDERDAQRR-------PKS--DPEYDP 298
Query: 71 HTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV- 129
TL IP+ + K+TP E+Q E+K+K D ++ + G F + +DA +A +
Sbjct: 299 RTLY-IPSSAWN-----KFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDALLANALF 352
Query: 130 -LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
L I N A IP + + G+KV V Q E+ K G G R
Sbjct: 353 DLKIAGGGRANMQLAGIPEMSFEYWAAQFIQMGYKVAKVDQRESMLAKEMREGSKGIVKR 412
Query: 189 GLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN------------VGKIRNGV 236
L + T TL G+ + + + + ++ GN V K+ +
Sbjct: 413 ELQCILTSGTL------TDGDMLHSDLATFCLAIREEPGNFYNETQLDSSTIVQKLNTKI 466
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQTEK 295
FG F ++ +TG++ EF D + L+ ++ + P E+++ + LS K
Sbjct: 467 FGAAF--------IDTATGELQMLEFEDDSECTKLDTLMSQVRPMEVVMERNNLSTLANK 518
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMSL-YENMGED---TLSNNEDQNMDVPEQ 351
++ + P + A + + AE++S Y + ED L + D V
Sbjct: 519 IVKFNSAPNAIFNEVKAGEEFYDCDKTYAEIISSEYFSTEEDWPEVLKSYYDTGKKV--- 575
Query: 352 GNHRSAIEGIMNMPDLAVQALAL-TIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTL 410
SA G++ L +++++K++ + M L TL
Sbjct: 576 --GFSAFGGLLYYLKWLKLDKNLISMKNIKEYDF------------VKSQHSMVLDGITL 621
Query: 411 QQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE 470
Q LE+ N+ +GS+ GTL + N +T G R++++W+ HPL +N I +RLD+V + +
Sbjct: 622 QNLEIFSNSFDGSDKGTLFKLFNRAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLLQ 681
Query: 471 SMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPS 530
D+T+ E + + + PD++R + I RT
Sbjct: 682 -------------------DITLRE--------QLEITFSKLPDLERMLAGIHSRTIKVK 714
Query: 531 EF---IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK 587
+F I + I+ L+ + G+ + + +S P + +A K
Sbjct: 715 DFEKVITAFETIIELQDSLKNNDLKGDVSKYI----------------SSFPEGLVEAVK 758
Query: 588 LLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
S N + N+++ G E ++ +Q ++EL ++ RKQ N++
Sbjct: 759 --SWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELMEILMTYRKQFKCSNIQ 816
Query: 648 FMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+ + IE+P A VP NW ++ + K RY+S EV +A A E +
Sbjct: 817 YKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEVRALARSMAEAKEIHKTLE 876
Query: 706 RAAWDSFLKEFGGYYAE-FQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQ- 761
+ ++F +Y + +QA++ +DCL A+ S RP VD+ +
Sbjct: 877 EDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYLGAPSCRPTIVDEVDSKTN 936
Query: 762 ------IHICSGRHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
+ S RHP L +F+PND L E+ ++TG N GKS +R
Sbjct: 937 TQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKEQPRLGLLTGANAAGKSTILRMAC 996
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
+ IMAQ+G +VP SA L +D I TR+GA+D+I QG+STF EL E IL T +S
Sbjct: 997 IAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKSTFFVELAETKKILDMATNRS 1056
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHV 933
L++VDELGRG S+ DG AIA + L ++ H + + F THY +A
Sbjct: 1057 LLVVDELGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLA--------------- 1101
Query: 934 SYLTSHKVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATV 988
S H + P+ ++ ++VT+LYK++ G SE SFG VA + + I A +
Sbjct: 1102 SSFKHHPQVRPLKMSILVDEATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIIDNAQI 1161
Query: 989 IAAKLE 994
A LE
Sbjct: 1162 AADNLE 1167
>gi|410667733|ref|YP_006920104.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM 12270]
gi|409105480|gb|AFV11605.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM 12270]
Length = 881
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 247/934 (26%), Positives = 418/934 (44%), Gaps = 137/934 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TPL Q +K KYPD LL +G + FGEDA A+K L I D
Sbjct: 5 TPLMNQYQSIKNKYPDCLLFFRLGDFYELFGEDAIKASKELEIVLTSRGVSKDKKVPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT-LEAA- 202
+P ++ +++RL+ G+K+ + +Q E A PGK G R + + T T LE A
Sbjct: 65 VPYHAVDGYLKRLLEKGYKIAICEQLEEAK-----PGK-GIVKRDVVRVITPGTVLEPAY 118
Query: 203 -EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
E GE+NY++ + ++G +ISTG +
Sbjct: 119 LEQ---------GENNYIISLYRKKESIG----------------CAWSDISTGKFQMTQ 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
F++ L +L L PAE ++ + E ++ Y
Sbjct: 154 FSETAAAEYLRDLLSRLQPAECIIRSDQAAFFEPLMEDY--------------------- 192
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVP-EQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+E+ G + N++ N V E + E ++ + A + ++ +L
Sbjct: 193 --------WESKGLNITRLNKEINGQVAWELVTRQFGQENLIGIDRDAFETGLVSAANLL 244
Query: 381 QFGLERIMCLGASFRSLSGSME---MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+ +E F+ LS M + A T + +E+ R +G G+L ++ TLT
Sbjct: 245 SYIMETQKTSTLPFKDLSVYTPKSCMYIDAMTRRNMELFRTLRDGKREGSLFWALDRTLT 304
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G+RLLR W+ PL D I AR +AV E+A S
Sbjct: 305 GMGTRLLRYWLESPLLDIEEIEARQEAVEELAGS-------------------------- 338
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+++ + + L + D++R I+R+ + A P + + + K LQ + E
Sbjct: 339 -FFLRNELQECLKKIYDLERIISRVDWQLAGPRDLLGL-------AKSLQVIPDLKEILG 390
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
+ SK L A ++ P K + ++ A+ L N II G EV
Sbjct: 391 QAKSKMLREAGVE------LDPVADIKEMLFSALIDDPPAN---LKNGGIIRTGYHPEVD 441
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNS 675
+ R + ++ + L R + G+++L ++ V G + P VP ++ + +
Sbjct: 442 KLRNMIAEGEDWIRKLEARERVRTGIKSLKIDYNKVFGYYIEVTKPNLHLVPGDYIRKQT 501
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
+ R+ + E+ A E L + + ++ G + + +A +DC
Sbjct: 502 LTQAERFITTELKEQEALFLGATERLQDLEYQIFLDIRRQVGEASEKIRRNAGIIARIDC 561
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYC 794
L + A + ++ +P + I I +GRHPVL+ +L + +FVPND + + +
Sbjct: 562 LVSFAETAARYHYTKPKI---NNSGVIRIKNGRHPVLEQLLPEGSFVPNDLEIGEDADRI 618
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
I+TGPNM GKS Y+RQ+ALI +MAQ GS VPA AE+ ++D ++ R GA D + +G+ST
Sbjct: 619 LILTGPNMAGKSTYMRQMALIVLMAQCGSLVPADEAEIGIVDRVFVRAGAFDDLGKGQST 678
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+NE SYI+ + T +S +++DE+GRGT T DG+ IA+A ++Y+ + +F THY
Sbjct: 679 FMMEMNEVSYIVHHATERSFIVLDEIGRGTGTFDGIGIAWAIIEYIHDKIGARTIFATHY 738
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + G V V+ + Q++ +L+KVVPG ++ S+G +VA+
Sbjct: 739 HQLTQLADILHG-VANCSVAV-----------QEEGQNIVFLHKVVPGGTDKSYGIQVAR 786
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
LA LP + RA +AA +E N+S KR
Sbjct: 787 LAHLPEELVQRAQEVAASMEGGSG----NKSGKR 816
>gi|253577912|ref|ZP_04855184.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850230|gb|EES78188.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 874
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 265/955 (27%), Positives = 436/955 (45%), Gaps = 174/955 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMTAS 144
+P+ Q+ + K +Y D +L +G + F +DA E+ + G L+
Sbjct: 2 SPMMQEYCKTKEQYKDCILFYRLGDFYEMFFDDALLVTRELEITLTGKDCGLEERAPMCG 61
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKAT-LEAA 202
+P ++ RL+ G KV + +Q E P KA G R + + T T L+AA
Sbjct: 62 VPYHAAETYINRLIERGHKVAICEQVE-------DPKKAKGLVKREVVRIVTPGTTLDAA 114
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
D ++NYL+ +V + G +I+TGD E
Sbjct: 115 -----ALDET--KNNYLMSIV----------------SMEEHFGCAIADITTGDCFLTEV 151
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+ L + PAE++ SN+ + I
Sbjct: 152 DKP---QKLLDEINKFVPAEIICNDSFY-------------MSNIDTDDLQNRLGIC--- 192
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI----MNMPDLAVQALALTIRH 378
V SL +D L + H ++EG+ + +A AL L ++
Sbjct: 193 ---VFSLDSWYFDDELCRR------TLKDHFHVGSLEGLGVGDYDCGIIAAGALFLYLKE 243
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
++ L + + R + M + +++ + LE++ + G+LL +++ T T
Sbjct: 244 TQKTALSHM----TTIRPYAAEKYMLIDSSSRRNLELVETLREKQKRGSLLWVLDKTKTA 299
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G+R LR +V PL DR+ I RL+A+ E+ ++ G R
Sbjct: 300 MGARTLRSYVEQPLIDRDEIEQRLEALEELNKN-GMLR---------------------- 336
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---------MQAILYAGKQ--LQ 547
+ LG D++R I+RI +++A P + IA ++ +L K LQ
Sbjct: 337 ----DEIREYLGPVYDLERLISRISYKSANPRDLIAFASSLEMLPYIKQVLKEFKTPLLQ 392
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+++ D + E VT L+KR I+ P + K D G I
Sbjct: 393 KIYEDMDSLEDVTD------LIKRAIV--EDPPLAQK-------------DGG------I 425
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK-- 665
I G +V + R++ K+ L L R++ G++ ++ + +E+ FK
Sbjct: 426 IKEGYNEDVDKFRRSRTDGKKWLSELEAKERERTGIKTMKIKYNRVFGYSLEITNTFKDL 485
Query: 666 VPLNWAKVNSTKKTIRYHSPE-------VLTALDQLALANEELTIVCRAAWDSFLKEFGG 718
VP N+ + + RY + E +L A D+L EL R A G
Sbjct: 486 VPDNYIRKQTLTNAERYITQELKELEDLILGAEDKLYALEYELFCDVRDA-------VGK 538
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL- 777
Q +A+AALD +LA ++ +FVRP + I I +GRHPV++ ++
Sbjct: 539 EVMRIQKTAKAVAALDVFASLALVAERNHFVRP---KTNTTGVIDIKNGRHPVVEQMIEN 595
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D F+ NDT L ++ IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA A + ++D
Sbjct: 596 DMFIANDTYLDNHKKRVSIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAEKANIGIVDR 655
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GASD + G+STF+ E+ E + ILRN TA+SL+I+DE+GRGTST DG+AIA+A +
Sbjct: 656 IFTRVGASDDLASGQSTFMVEMTEVANILRNATARSLLILDEIGRGTSTFDGLAIAWAVI 715
Query: 898 DYLLEHKKC--MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
+++ K C LF THY ++ +++ K G V Y ++ + K D D+ +
Sbjct: 716 EHISNTKLCGAKTLFATHYHELTELEGKIPG-VNNYCIA----------VKEKGD-DIVF 763
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQN-RSAKR 1008
L K+V G ++ S+G +VA+LA +P S I RA + +L +A++++ V++ SAK+
Sbjct: 764 LRKIVQGGADKSYGIQVAKLAGVPDSVIQRAKELVEELSDADITAAVKDLTSAKK 818
>gi|167750508|ref|ZP_02422635.1| hypothetical protein EUBSIR_01484 [Eubacterium siraeum DSM 15702]
gi|167656434|gb|EDS00564.1| DNA mismatch repair protein MutS [Eubacterium siraeum DSM 15702]
Length = 870
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 260/921 (28%), Positives = 420/921 (45%), Gaps = 133/921 (14%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
+K TP+ QQ VE+K Y D +L +G + F EDA +A+K L + +P
Sbjct: 11 EKLTPMMQQYVEIKANYKDYILFYRLGDFYEMFNEDAMVASKELELTLTSRAGTPMCGVP 70
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
++++L++ GFKV + +QT A+ G R + L + T+ A +
Sbjct: 71 HHSAEGYIKKLIDKGFKVAICEQTTDPALSK------GLVERDIVRLVSAGTVIEASML- 123
Query: 207 GGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV-VYGEFNDG 265
EDG +NY+ C+ VG+ NG G+V +ISTG+V + N
Sbjct: 124 --EDGS---NNYISCIY-----VGE--NGT---------GMVFADISTGEVHAVEKANSK 162
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
+ A +P ELL + + A
Sbjct: 163 KTDEDIIAQFSQYTPVELLFNAEFLNRKQ---------------------------AYTF 195
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNH--RSAIEGIMNMPDLAVQALALTIRHL---K 380
+ + Y + LS+ + DV E +A E + D A++AL +R+L +
Sbjct: 196 IRNRYGKCSAEQLSDEDFSIDDVSEITAQFGGTADEIGLAGKDNALRALCALLRYLYKAQ 255
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ G +R + L S M L T + LE+ +G + G+LL +++ T T G
Sbjct: 256 RSGAKRFVKLNVH----SSGEFMQLGLATRRNLELTSTMRSGEKKGSLLWVLDKTDTSMG 311
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R LR+ + PL D I R DAV + + +
Sbjct: 312 RRKLRQCIEQPLTDTAAIIRRHDAVEALINNSAA-------------------------- 345
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L + T L + D++R +TRI ++ A + ++A+ + L QL D +++
Sbjct: 346 -LYDIKTDLAKVYDLERLMTRIIYKAANAKD----VKALGATCRILPQLKSD---LSQIS 397
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFSEVAR 618
++ LT S I + V + AD+ L + I NG E+ R
Sbjct: 398 TQ-----------LTRSLDKKISPLDDIADLVERAIADEPPALMKDGGYIKNGFNEELDR 446
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAKVNST 676
R K+ L + ++ G++NL + IE+ VP + + +
Sbjct: 447 LRNITGGGKDLLAQIEQQEKEATGIKNLRVGYNRVFGYYIEVSKGNVSMVPDRYVRKQTL 506
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF-QAAVQALAALDC 735
RY + E+ +++ AN+++ + AA + ++EF + Q +++AALD
Sbjct: 507 TNGERYITDELKKIENEILGANDKI-LALEAAIFAEVREFIARRLDLIQQTAESVAALDV 565
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYC 794
L + A +S N+ RP+ +D I I GRHPV++ ++ + F PND L +
Sbjct: 566 LCSYAVVSIENNYCRPMMANDS---VIEIKDGRHPVVEKMVNEILFTPNDVYLDVKSNRL 622
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS ++RQVA+I +MAQ+G FVPAS A L V+D I+TR+GASD + G+ST
Sbjct: 623 MIITGPNMSGKSTFMRQVAVIVLMAQIGCFVPASYARLGVVDRIFTRVGASDDLSAGQST 682
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVTH 913
F+ E+ E + IL T SLVI+DE+GRGTST+DGV+IA A +Y+ C LF TH
Sbjct: 683 FMVEMTEVATILNEATKNSLVILDEIGRGTSTYDGVSIAKAVAEYISSKAIGCKTLFATH 742
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ ++ + G V Y V +S +D+ +L+K+V G ++ S+G +VA
Sbjct: 743 YHELISLENELDG-VRNYSVKV-----------KRSGEDIKFLHKIVEGGTDDSYGIEVA 790
Query: 974 QLAQLPPSCISRATVIAAKLE 994
+LA LP RA + A+LE
Sbjct: 791 RLAGLPKKVTDRAKQLLAELE 811
>gi|393779450|ref|ZP_10367693.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|392610310|gb|EIW93092.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 412
str. F0487]
Length = 860
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 265/949 (27%), Positives = 423/949 (44%), Gaps = 196/949 (20%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----A 143
K TPL +Q ++K+KYPD LL+ VG + FGEDA AA L I +N A
Sbjct: 3 KETPLMKQYNQIKSKYPDALLLFRVGDFYETFGEDAVKAAHTLDIVLTNRNNGTERSELA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
P +N ++ +LV AG++V + Q E + G RG++ L T
Sbjct: 63 GFPYHSINTYLPKLVKAGYRVAICDQLEDPKLVK------GIVKRGVTELVTPG------ 110
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
V +D +SN + V +GK G +++STG+ + + +
Sbjct: 111 -VALNDDILQSKSNNFLASV----WLGK-----------QSCGAAFLDVSTGEFLVAQGD 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ + +L + P+ELL+ + K+
Sbjct: 155 KTYI----DKLLQNFRPSELLVAKHQKKE------------------------------- 179
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRHLKQ 381
E+ G+D H +E + D A Q L LK
Sbjct: 180 -----FAEHFGDDF----------------HCFYLEDWVFKDDYAQQVLTKHFQTNSLKG 218
Query: 382 FGL----ERIMCLGASFRSLSGSME-----------------MTLSANTLQQLEVLRNNS 420
FG+ E I+ GA LS + + L T++ LE+ N+
Sbjct: 219 FGVDELTEAILTAGAILYYLSETQHHQLQHITAIQRIAEEAYVWLDKFTIRNLELYAGNT 278
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
S +LL +++ TL+ GSR L+RW+ PL +LD + R
Sbjct: 279 TPS--VSLLDVIDKTLSPMGSRTLKRWLALPL-------KKLDKI----------RQRHE 319
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
V + K+ DV L V T+L R DI+R I+++ P E +
Sbjct: 320 VVDYFLKHIDV----------LEQVKTALSRMGDIERLISKVATLKINPREVV------- 362
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTAS--SPAVIGK--------AAKLLS 590
QL E H L+K+L L ++ S ++G +A++
Sbjct: 363 -------QLRASLE----------HIPLIKQLCLASANESLTLLGDKLHSCEQLSARIAE 405
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
T+N++A ++ I+ G +E+ R S K LD L+ ++ G+ +L+ +
Sbjct: 406 TLNEDAP--VNIAKGNAIAKGFSAELDELRGLSHSGKSYLDDLLLRESQRTGIPSLKIDN 463
Query: 651 VSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+ + IE+ K VP +W + + RY + E+ ++ A E++ + +
Sbjct: 464 NNVFGYYIEVRNTHKDKVPSDWIRKQTLVNAERYITGELKEYEAKILGAEEKIAQLEQLL 523
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGR 768
+ + Y + Q + LDCL ATL+ N+ RP + +E I I GR
Sbjct: 524 YAELIAFISEYIGQVQTNATLIGQLDCLCGFATLAMENNYHRP---EMNEGYAIDIKDGR 580
Query: 769 HPVLDTILLDN--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
HPV++ L ++ ND L ER+ +ITGPNM GKS +RQ ALI ++AQ+GSFVP
Sbjct: 581 HPVIEKQLPVGTPYIANDVYLDRERQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVP 640
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
A+SA+L ++D I+TR+GASD+I G STF+ E+NEA+ IL N + +SLV++DE+GRGTST
Sbjct: 641 AASAQLGIVDKIFTRVGASDNISMGESTFMVEMNEAALILNNISDRSLVLLDEIGRGTST 700
Query: 887 HDGVAIAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPM 945
+DG++IA+A +YL EH K LF THY ++ ++ +F + Y+VS
Sbjct: 701 YDGISIAWAIAEYLHEHPSKAKTLFATHYHELNEMSEQFE-RIKNYNVSV---------- 749
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V +L K+ G S SFG VA++A +P I +A + KLE
Sbjct: 750 -KETKDSVLFLRKLTEGGSAHSFGIHVAKMAGMPQYVIQKANKMLKKLE 797
>gi|373453197|ref|ZP_09545093.1| DNA mismatch repair protein MutS [Eubacterium sp. 3_1_31]
gi|371964036|gb|EHO81574.1| DNA mismatch repair protein MutS [Eubacterium sp. 3_1_31]
Length = 843
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 243/924 (26%), Positives = 424/924 (45%), Gaps = 149/924 (16%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDH 138
T YTP+ Q +ELK K+ D ++ +G + F +DA++A++ L G A ++
Sbjct: 2 TKKNTYTPMMTQYLELKEKHKDEIIFYRLGDFYEMFFDDAKIASQELDLVLTGKNAGVEE 61
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
IP N +++RL+ G+KV +V+Q E A G R + + T T
Sbjct: 62 RVPMCGIPHHAANGYIQRLIQKGYKVAIVEQMENPA------TAKGLVKRDILKIVTPGT 115
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ D E + + + + FG L VV E++TG++
Sbjct: 116 IM---------DEVNDEKATVY--------IASLHDYQFG------LAVVLCEMTTGEMR 152
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ + ++ VLL + AE+++ + K+ KM +E R I
Sbjct: 153 AQLIDKQVM--AIQKVLLGNNVAEIVIEEKFDKKIVKM------------IEDMDR-ITI 197
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
A + YE++ +S+ ED + R A + N D + + H
Sbjct: 198 SYYQDAAIKEAYEHL----ISDIEDDRI--------RHAFGILTNYLDETQRRNMAHLNH 245
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
++Q F + + NT Q LE+ + N S+ TL ++ +
Sbjct: 246 VEQ-------VYENEF--------LQMDYNTKQNLELTASIRNNSKSLTLWSFLDKCRSS 290
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
GSRLL++W+ +PL D +I+ RLDA+ + ++ + T + + +H
Sbjct: 291 MGSRLLKKWIEYPLVDTKMINKRLDAIEYLNDN---FITKDELKEH-------------- 333
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
LS V D++R R+ + +A P + + +++ + +A Y E
Sbjct: 334 ---LSFVY-------DMERLSARVAYGSANPRDILRLIKTLEHAPMIFDLFKDCNAYSEF 383
Query: 559 VT---SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
T + L+ + ++ +P V K D G + G E
Sbjct: 384 QTIDVCQELYEVIDGAIV---ENPPVTLK-------------DGG------VFVEGYHEE 421
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP----ANFKVPLNWA 671
+ + R+ ++ K + +L N R++ G+++L+ + IE+ + K +
Sbjct: 422 LDQVREIGKNGKNWILALENKERERTGVKSLKIGYNRVFGYYIEVTKTNLSQIKEEFGYV 481
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ ++ R+ + E+ D + A E + +++ L + Y + AL+
Sbjct: 482 RKHTLANAERFITQELKEQEDAIVHAQERSIRLENELFENLLDKIRVYLPKLHDLAIALS 541
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAE 790
+D L+ALA +S + RP F +H +++ RHP+LD I+ +V ND + +
Sbjct: 542 TIDALYALAEISSENGYTRPHFHKEH---TVYMEEARHPILDKIMKTTRYVSNDLKMQED 598
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
++ IITGPNMGGKS Y+RQ AL+ IMAQ+G +VPA AEL + D I+TR+GASD I
Sbjct: 599 QD-IMIITGPNMGGKSTYMRQTALLVIMAQIGCYVPARKAELPIFDQIFTRIGASDDIMS 657
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ E+ EA+ L++ +A SL++ DE+GRGTST+DG+A+A A ++Y+L + K LF
Sbjct: 658 GQSTFMVEMMEANNALKHASANSLILFDEIGRGTSTYDGMALAQAMIEYILRNIKAKTLF 717
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ ++ + G + HV + D+ VT+LY+V+ G ++ S+G
Sbjct: 718 STHYHELTQMEERNPGILNV-HVDV-----------HEEDEKVTFLYRVIEGKADKSYGI 765
Query: 971 KVAQLAQLPPSCISRATVIAAKLE 994
VA+LA LP S + RA I LE
Sbjct: 766 NVARLAHLPGSVLDRAQQILDNLE 789
>gi|373108709|ref|ZP_09522991.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 10230]
gi|423129619|ref|ZP_17117294.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 12901]
gi|371646826|gb|EHO12337.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 10230]
gi|371648279|gb|EHO13769.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 12901]
Length = 865
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 256/925 (27%), Positives = 428/925 (46%), Gaps = 147/925 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K TPL +Q ++K KYPD L+ VG + FGEDA A+K+LGI A
Sbjct: 9 KETPLMKQYNDIKAKYPDACLLFRVGDFYETFGEDAVRASKILGITLTKRSAGTASETEL 68
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEA 201
A P +NV++ +LV AG +V + Q E P RG++ L T
Sbjct: 69 AGFPHHSINVYLPKLVKAGLRVAICDQLE-------DPKTTKTIVKRGVTELVTPG---- 117
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V ++ +SN +C + F +G+ +++STG+ + E
Sbjct: 118 ---VALNDEVLHSKSNNFLCAIH------------FAKK---TIGISFLDVSTGEFLTTE 159
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ ++ + +L + +P+E+L+ K + L G N+ + D ++
Sbjct: 160 GDQDYI----DKLLQNFAPSEILV----QKSNKTHFLQNYGTTYNLFL----LDDWVFKT 207
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
A SL + ++L +++ +EG +A A+ + +
Sbjct: 208 DFA-FESLTTHFKTNSLKGFGVEDL-----------VEGT-----IACGAILYYLSETQH 250
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
LE I ++ + ++ + + T++ LE L N++N + TLL +++ TL+ G
Sbjct: 251 TRLEHI----SNIQRIAEDAYVWMDRFTIRNLE-LYNSANLNAI-TLLDVIDKTLSPMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL+RW+ PL D I+ R + V + E NS+ +
Sbjct: 305 RLLKRWLALPLKDTKKITDRHNIVEILKE-----------------NSE----------L 337
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHIDGEYREK 558
L+ T + + D++R I++I +P E I + + AI+ + Q+ D K
Sbjct: 338 LTLFQTQIKKISDLERLISKIATGKVSPRELIYLNDSLDAIIPIKETAQKSSNDSL---K 394
Query: 559 VTSKTLHSA-LLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
LH LL+ I ++ +P I K I+ G
Sbjct: 395 QMGNKLHGCELLREKIRGTISEDAPVAIAKGNA--------------------IAEGVHP 434
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAK 672
E+ RK S KE L+++ ++ G+ +L+ F +V G + KVP W +
Sbjct: 435 ELDELRKISTSGKELLEAMEIRESEKTGIPSLKISFNNVFGYYIEVRNTHKNKVPAEWIR 494
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ RY + E+ ++ A E++ + ++ F+ Y Q +A
Sbjct: 495 KQTLVNAERYITEELKEYETKILGAEEKIYKLENELFEQFVAWCAQYIKPVQLNANLIAQ 554
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNLHAE 790
LDCL + A + N+VRP+ D +E + I GRHPV++ L + ++ ND L+ +
Sbjct: 555 LDCLSSFAQQALENNYVRPLIDDSYE---LDIKDGRHPVIEKQLAYDTPYITNDVYLNNK 611
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA + +D I+TR+GASD+I
Sbjct: 612 EQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAREVRMGPVDKIFTRVGASDNISM 671
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVL 909
G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL +H K L
Sbjct: 672 GESTFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAIAEYLHQHPGKPKTL 731
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ D+ F G + Y+VS + +V +L K+VPG S SFG
Sbjct: 732 FATHYHELNDMSQNFDG-IKNYNVSV-----------KELKDNVLFLRKLVPGGSAHSFG 779
Query: 970 FKVAQLAQLPPSCISRATVIAAKLE 994
VA++A +P + + RA + +LE
Sbjct: 780 IHVAKMAGMPTTVLKRAEKMLKQLE 804
>gi|340351558|ref|ZP_08674470.1| DNA mismatch repair protein MutS [Prevotella pallens ATCC 700821]
gi|339617842|gb|EGQ22455.1| DNA mismatch repair protein MutS [Prevotella pallens ATCC 700821]
Length = 889
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 253/946 (26%), Positives = 440/946 (46%), Gaps = 167/946 (17%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS- 144
NK TP+ +Q +K K+PD L++ G + + +DA A+K+LGI +N A
Sbjct: 5 NKGLTPMMRQFFSMKEKHPDALMLFRCGDFYETYCDDAIEASKILGITLTRRNNGAAAGD 64
Query: 145 ----IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSAL 193
P L+ + +L+ AG +V + Q E K G+ G RG++ L
Sbjct: 65 EMAGFPHHALDTFLPKLIRAGKRVAICDQLEDPKKKREALKGQRGLSAEDKMVKRGITEL 124
Query: 194 YTKATLEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
T + G++ E+N+L V FG G GV ++I
Sbjct: 125 VTPG-------IAMGDNVLNYKENNFLAAVH-------------FGKG---ACGVSFLDI 161
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + GE ++ E ++ + SP E+ L +++ K A
Sbjct: 162 STGEFLVGEGTFDYV----EKLIGNFSPKEV-----LYERSRK----------------A 196
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
D + G M +YE M + ++ + + G G+ ++ + + A
Sbjct: 197 DFDRYFGTR-----MCVYE-MEDWVFTDLSARQKLLKHFGTKNLKGFGVDHLNNGVIAAG 250
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG-TLLHI 431
A+ +++L+Q I + S + + L T++ LE++ + E G +LL +
Sbjct: 251 AI-MQYLEQTQHTHISHI-TSLARIEEEKYVRLDRFTIRSLELV---APMQEDGLSLLGV 305
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T+T G R+L RW+ PL D I+ RLD V +
Sbjct: 306 VDRTITPMGGRMLHRWLVFPLKDVKPINERLDIV------------------------EY 341
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI----------LY 541
EP F + L L +G D++R I+R+ +P E + + A+ LY
Sbjct: 342 YFREPDFRHCLDDQLHRMG---DLERIISRVAAGRVSPREVVQLKNALSAIQPIKSACLY 398
Query: 542 AGKQL-----QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA 596
+ + +QL++ R+++ + + + P ++ K
Sbjct: 399 SSNEALKRVGEQLNLCESIRDRIEQEIM-----------SDPPQLVAKGG---------- 437
Query: 597 ADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
+I++G +E+ R ++ K+ L + + G+ +L+ + +
Sbjct: 438 ----------VIAHGFNAELDELRSIRENGKQVLLDIQEKEAAKTGINSLKIGFNNIFGY 487
Query: 657 LIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
+E+ FK VP +W + + + RY +PE+ ++ A+E++ I+ ++ ++
Sbjct: 488 YLEVRNTFKNKVPQDWIRKQTLAQAERYITPELKEYEAKILGADEKILILEARLFNELVQ 547
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
+ Y + Q LA LDCL + A ++ +VRP+ VDD + I I GRHPV++T
Sbjct: 548 DMQEYIPQIQINANLLARLDCLLSFANIAEENKYVRPM-VDD--SMVIDIKKGRHPVIET 604
Query: 775 ILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
L + ++PND L E++ +ITGPNM GKS +RQ ALI ++AQVG FVPA SA +
Sbjct: 605 QLPLGEQYIPNDVYLDNEQQQIMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAESARI 664
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
++D ++TR+GASD+I G STF+ E+ EA+ IL + T +SLV+ DELGRGTST+DG++I
Sbjct: 665 GLVDKVFTRVGASDNISLGESTFMVEMTEAANILNSVTPRSLVLFDELGRGTSTYDGISI 724
Query: 893 AYATLDYLLEHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
A+A ++YL E + LF THY ++ ++ F + ++VS + +
Sbjct: 725 AWAIVEYLHEQPRATARTLFATHYHELNEMAKNFH-RIKNFNVSV-----------KEVN 772
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ +L K+ G SE SFG VA +A +P S + RA ++ +LEA+
Sbjct: 773 GKIIFLRKLERGGSEHSFGIHVADIAGMPKSIVKRANIVLKELEAD 818
>gi|189030712|sp|A9KG24.1|MUTS_COXBN RecName: Full=DNA mismatch repair protein MutS
Length = 859
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 254/939 (27%), Positives = 422/939 (44%), Gaps = 149/939 (15%)
Query: 81 SQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----- 133
S TT N ++TP+ +Q + +K +YPD+L+ +G + F +DA+ AAK+L I
Sbjct: 7 SPTTQNDFSQHTPMMRQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARG 66
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
H A +P + ++ +LV G V + +Q A GP R ++ +
Sbjct: 67 QSAGHAIPMAGVPYHAVENYLTKLVRLGESVVICEQIGDPATSK------GPVAREVTRI 120
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T T+ + D N L+ + + R G+ ++I+
Sbjct: 121 ITPGTVSDEALLDEHRD------NTLMVIHQEKD----------------RFGIATLDIT 158
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G + E + L A + + PAELL+ + S K A +++
Sbjct: 159 SGRFLIQEI---ISENALFAEIERIRPAELLISEENSVHPLK--------ADSIKRRPPW 207
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA-- 371
F AL + ++ D GI ++P LA+ A
Sbjct: 208 E--FDHATALTLLCQQFQTKSLDGF---------------------GITHLP-LAITAAG 243
Query: 372 -LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L + + ++ L I + A + + ANT + LE++ N G E +L
Sbjct: 244 CLLQYVNYTQKSALPHIHSIQAE----QNEEALFIDANTRRNLELI-TNLQGEEVHSLAW 298
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T GSRLLRRW+ PL D+ L+ R +AVS
Sbjct: 299 LLDHTATPMGSRLLRRWINRPLRDQILLQQRQNAVS------------------------ 334
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQ 547
T++E + Y S + +L D++R + RI R+A P + + + QA+ +QL
Sbjct: 335 -TLLEKRNY---SEIYENLRHIGDLERIVARIALRSARPRDLMQLRQALGVLPTLHQQLT 390
Query: 548 QLHIDGEYREKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L ++ + +E + L L + L + + P VI D G
Sbjct: 391 NLPLNKQLQEIKNNLGLFDELFRLLQKAIIENPPIVI--------------RDGG----- 431
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
+I++G + + R ++ + L L R++ + L+ + + G I
Sbjct: 432 -VIADGYDAPLDELRNMSTNSHQFLIDLEQQERERTKINTLKVGYNRIHGYYIEISRAQA 490
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ P + + + K RY +PE+ D++ + + ++ L
Sbjct: 491 KQAPTEYIRRQTLKNVERYITPELKIFEDKVLSSRSRALAREKELYEQLLDTLIEKLIPL 550
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
Q A+A LD L+ LA + NF P F D P+ I I +GRHP+++ ++ D F+PN
Sbjct: 551 QQCASAIANLDVLNTLAERADTLNFNAPQFCD--YPI-IKIEAGRHPIVENVMTDPFMPN 607
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT+L +R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA +A+L +D I+TR+G
Sbjct: 608 DTHLDEKRRML-IITGPNMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIG 666
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + GRSTF+ E+ E + IL N T +SLV++DE+GRGTST DG+++AYA YL
Sbjct: 667 AADDLASGRSTFMVEMTETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATK 726
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K LF THY ++ + + +V H+ + + ++ + +L+ + G
Sbjct: 727 LKAFALFATHYFELTALASTLP-AVKNVHLDAV-----------EHEEKIIFLHALREGP 774
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+ S+G +VAQLA +P S I A +LE V S Q
Sbjct: 775 ANKSYGLQVAQLAGIPRSVIQHARQKLEELENPVISETQ 813
>gi|225567942|ref|ZP_03776967.1| hypothetical protein CLOHYLEM_04015 [Clostridium hylemonae DSM 15053]
gi|225163230|gb|EEG75849.1| hypothetical protein CLOHYLEM_04015 [Clostridium hylemonae DSM 15053]
Length = 875
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 251/928 (27%), Positives = 420/928 (45%), Gaps = 139/928 (14%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
QQ V+ K +YPD +L +G + F EDA A++ L G L+ IP
Sbjct: 3 QQYVDTKKEYPDCILFYRLGDFYEMFFEDALTASRELEITLTGKNCGLEERAPMCGIPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT---LEAAEDV 205
++ ++ RLV+ G+KV + +Q E A G R + + T T +A ++
Sbjct: 63 AVDGYLNRLVSKGYKVAICEQMEDPA------AAKGLVRREVVRIVTPGTNLDTQALDET 116
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
++NY++CVV D R G+ +++TGD E
Sbjct: 117 ---------KNNYIMCVV------------YIAD----RYGLSVADVTTGDYFVTELETS 151
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
L + P+EL+ + M L + + + D + AL +
Sbjct: 152 ---EKLFDEIYKFMPSELICNEAFYMSGMDMDLL----KERLGIAIYALDAWYFDDALCQ 204
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLE 385
+L E+ +S+ E + G++ + G + + + HL
Sbjct: 205 -RTLKEHF---KVSSMESLGL-----GDYDCGVIGAGALLTYLTETQKTDLTHL------ 249
Query: 386 RIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLR 445
+ + M L ++T + LE+ + G+LL +++ T T G+R LR
Sbjct: 250 ------SKLTGYAAGKYMMLDSSTRRNLELCETLREKQKRGSLLWVLDKTKTAMGARTLR 303
Query: 446 RWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSV 505
+++ PL D+ I RLDAV E E I + LS V
Sbjct: 304 KYIEQPLIDKEEIERRLDAVEEFKEG--------------------AIAREEIREYLSPV 343
Query: 506 LTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH 565
D++R + +I +++A P + A ++ HI + +
Sbjct: 344 Y-------DLERLVCKITYKSANPRDLTAFKSSLAMLP------HI------RCILGDMK 384
Query: 566 SALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQFSEVARARK 621
S LL+ L S + L++ E A +G II G EV R R
Sbjct: 385 SPLLRGLF---DSLDTLEDLCSLITDAILEEPPIAMKEGG-----IIREGYNEEVDRLRA 436
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKT 679
A KE L L R++ G++NL + +E+ +FK VP + + +
Sbjct: 437 AKSDGKEWLAKLEEQEREKTGIKNLRIRFNKVFGYYLEVTNSFKNLVPDYYTRKQTLANA 496
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY PE+ D + A ++L + + Q +A+A +D +L
Sbjct: 497 ERYIIPELKELEDTILGAEDKLYALEYELYCQVRDAIAAEIVRIQTTAKAVAQIDVFTSL 556
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQIIT 798
A ++ N+VRP +E I I GRHPV++ ++ D F+ NDT L+ + +IT
Sbjct: 557 ALVAERNNYVRPKI---NERGIIDIKDGRHPVVEKMIPNDMFIANDTFLNDRKNRISVIT 613
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNM GKS Y+RQ ALI +M+Q+GSFVPASSA++ ++D I+TR+GASD + G+STF+ E
Sbjct: 614 GPNMAGKSTYMRQTALIVLMSQIGSFVPASSADVGLVDRIFTRVGASDDLASGQSTFMVE 673
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFVTHYPK 916
+ E + ILRN T +SL+I+DE+GRGTST DG++IA+A ++++ + LF THY +
Sbjct: 674 MTEVANILRNATGRSLLILDEIGRGTSTFDGLSIAWAVIEHISNSRLLGAKTLFATHYHE 733
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ +++ K +V Y ++ + K D D+ +L K+V G ++ S+G +VA+LA
Sbjct: 734 LTELEGKI-DNVNNYCIA----------VKEKGD-DIVFLRKIVKGGADKSYGIQVAKLA 781
Query: 977 QLPPSCISRATVIAAKL-EAEVSSRVQN 1003
+P + I RA I +L A++++RV++
Sbjct: 782 GVPDTVIERAKEIVEELSHADITARVKD 809
>gi|291557073|emb|CBL34190.1| DNA mismatch repair protein MutS [Eubacterium siraeum V10Sc8a]
Length = 870
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 261/922 (28%), Positives = 419/922 (45%), Gaps = 135/922 (14%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
+K TP+ QQ VE+K Y D +L +G + F EDA +A+K L + +P
Sbjct: 11 EKLTPMMQQYVEIKANYKDYILFYRLGDFYEMFNEDAMVASKELELTLTSRAGTPMCGVP 70
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
++++L++ GFKV + +QT A+ G R + L + T+ A +
Sbjct: 71 HHSAEGYIKKLIDKGFKVAICEQTTDPALSK------GLVERDIVRLVSAGTVIEASML- 123
Query: 207 GGEDGCGGESNYLVCVVDDDGNVGKIRNG-VFGDGFDVRLGVVAVEISTGDV-VYGEFND 264
EDG +NY+ C+ VG+I G VF D ISTG+V + N
Sbjct: 124 --EDGS---NNYISCIY-----VGEIGTGMVFAD------------ISTGEVHAVEKANS 161
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
+ A +P ELL + + A
Sbjct: 162 KKTDEDIIAQFSQYTPVELLFNAEFLNRKQ---------------------------AYT 194
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNH--RSAIEGIMNMPDLAVQALALTIRHL--- 379
+ + Y + LS+ + DV E +A E + D A++AL +R+L
Sbjct: 195 FIRNRYGKCSAEQLSDEDFSIDDVSEITAQFGGTADEIGLAGKDNALRALCALLRYLYKA 254
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
++ G +R + L S M L T + LE+ +G + G+LL +++ T T
Sbjct: 255 QRSGAKRFVKLNVH----SSGEFMQLGLATRRNLELTSTMRSGEKKGSLLWVLDKTDTSM 310
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G R LR+ + PL D I R DAV + + +
Sbjct: 311 GRRKLRQCIEQPLTDTAAIIRRHDAVEALINNSAA------------------------- 345
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L + T L + D++R +TRI ++ A + ++A+ + L QL D ++
Sbjct: 346 --LYDIKTDLAKVYDLERLMTRIIYKAANAKD----VKALGATCRILPQLKSD---LSQI 396
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFSEVA 617
+++ LT S I + V + AD+ L + I NG E+
Sbjct: 397 STQ-----------LTRSLDKKISPLDDIADLVERAIADEPPALMKDGGYIKNGFNEELD 445
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAKVNS 675
R R K+ L + ++ G++NL + IE+ VP + + +
Sbjct: 446 RLRNITGGGKDLLAQIEQQEKEATGIKNLRVGYNRVFGYYIEVSKGNVSMVPDRYVRKQT 505
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF-QAAVQALAALD 734
RY + E+ +++ AN+++ + AA + ++EF + Q +++AALD
Sbjct: 506 LTNGERYITDELKKIENEILGANDKI-LALEAAIFAEVREFIAQRLDLIQQTAESVAALD 564
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREY 793
L + A +S N+ RP+ +D I I GRHPV++ ++ + F PND L +
Sbjct: 565 VLCSYAVVSIENNYCRPMMANDS---VIEIKDGRHPVVEKMVNEILFTPNDVYLDVKSNR 621
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS ++RQVA+I +MAQ+G FVPAS A L V+D I+TR+GASD + G+S
Sbjct: 622 LMIITGPNMSGKSTFMRQVAVIVLMAQIGCFVPASYARLGVVDRIFTRVGASDDLSAGQS 681
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVT 912
TF+ E+ E + IL T SLVI+DE+GRGTST+DGV+IA A +Y+ C LF T
Sbjct: 682 TFMVEMTEVATILNEATRNSLVILDEIGRGTSTYDGVSIAKAVAEYISSKAIGCKTLFAT 741
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ ++ + G V Y V +S +D+ +L+K+V G ++ S+G +V
Sbjct: 742 HYHELISLENELDG-VRNYSVKV-----------KRSGEDIKFLHKIVEGGTDDSYGIEV 789
Query: 973 AQLAQLPPSCISRATVIAAKLE 994
A+LA LP RA + A+LE
Sbjct: 790 ARLAGLPKKVTDRAKQLLAELE 811
>gi|225174620|ref|ZP_03728618.1| DNA mismatch repair protein MutS [Dethiobacter alkaliphilus AHT 1]
gi|225169747|gb|EEG78543.1| DNA mismatch repair protein MutS [Dethiobacter alkaliphilus AHT 1]
Length = 867
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 262/920 (28%), Positives = 428/920 (46%), Gaps = 129/920 (14%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAHLDHNFMTASI 145
K TP+ +Q E+K D +L+ VG + F +DA++ A+ L I D + A
Sbjct: 2 KTETPMIRQYREIKEHNQDKILLFRVGDFYELFFDDAKIGARELEITLTARDKDVPLAGF 61
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAED 204
P LN ++ RL+ G+KV + +Q E P +A G R + + T T+
Sbjct: 62 PYHALNTYLSRLIERGYKVAICEQVE-------DPKQAKGIVKREIVQVITPGTVTETSL 114
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + NYLV V VG+ GF G+ AV++STG V +
Sbjct: 115 LDEKSN------NYLVSVY-----VGR-------GGF----GLAAVDVSTGQFVMSQERG 152
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
L L L+PAE+++ + +K + + A A + V A C AL
Sbjct: 153 SQAARFLADELCRLNPAEIIVNEG-AKDNQVLTEAMARLGTQV----AINPCRDKNYALK 207
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ--- 381
+ E LS QN+D + A+ + HL+Q
Sbjct: 208 QAQ-------ETLLSQFAVQNLDSLGCADLFFAVSAAGAALAYLHDNRQGNLSHLQQPEV 260
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ E M L A+ R + LE+ R +YG+LL +++ T + G
Sbjct: 261 YNAEGYMVLDAATR---------------RNLELTRTIREERKYGSLLWVLDKTRSALGG 305
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL+RW+ PL D+ I RLDAV E+A + +
Sbjct: 306 RLLKRWLEQPLLDKAAICERLDAVEELAGD---------------------------FLM 338
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L + L D++R ++++ + +A + +A+ + ++L G E++ +
Sbjct: 339 LDELSELLDEVYDLERLLSKVHYESANARDLVALRSTLAVLPAVREKLLSGG---ERMQT 395
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
H +L+ L L + L D G ++ + +V + R
Sbjct: 396 LARHLPVLEDLSLYLTEA--------LCDDPPLSVRDGG------LVRDRFHPDVDKLRH 441
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFKV-PLNWAKVNSTKKT 679
A + ++ + S+ R++ G+++L+ + IE+ AN + P ++ + +
Sbjct: 442 ACRHGRDYILSMEQRERERTGIKSLKVGYNKVFGYYIEITRANAHLTPDDYIRKQTLANA 501
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSF---LKEFGGYYAEFQAAVQALAALDCL 736
RY +PE L + L EE +C ++ F ++ G E Q A ALA LD
Sbjct: 502 ERYITPE-LKEYEATVLGAEE--KICALEYELFQEVRRKVGANTMEIQEAAAALAQLDVF 558
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQ 795
+LA ++R+ +VRP VDD + V I GRHPV++ ++ D+ FVPNDT L + +
Sbjct: 559 QSLARVARDYRYVRPQ-VDDGDVVDIR--EGRHPVVERVMQDSMFVPNDTRLDRDNQRLL 615
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNM GKS Y+RQ ALI ++AQVGSFVPA+SA + ++D I+TR+GA+D + G+STF
Sbjct: 616 MITGPNMAGKSTYMRQTALIVLLAQVGSFVPAASANIGLVDRIFTRIGAADDLVGGQSTF 675
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
+ E++E + IL T +SLV++DE+GRGTST DG++IA A +++L LF THY
Sbjct: 676 MVEMSEVANILSRATDKSLVLLDEVGRGTSTFDGISIARAVVEHLYGKVGARTLFATHYH 735
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ D+ S L + + M + +D+ +L+KV+ G + S+G +VA+L
Sbjct: 736 ELTDL------------ASDLPAVQNMATAVKEKGEDIVFLHKVIAGSVDHSYGIQVARL 783
Query: 976 AQLPPSCISRATVIAAKLEA 995
A LP ISR+ I LE+
Sbjct: 784 AGLPQRVISRSREILNSLES 803
>gi|420150474|ref|ZP_14657633.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394752066|gb|EJF35781.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 860
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 265/947 (27%), Positives = 418/947 (44%), Gaps = 192/947 (20%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----A 143
K TPL +Q ++K+KYPD LL+ VG + FGEDA AA L I +N A
Sbjct: 3 KETPLMKQYNQIKSKYPDALLLFRVGDFYETFGEDAVKAAHTLDIVLTNRNNGTERSELA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
P +N ++ +LV AG++V + Q E + G RG++ L T
Sbjct: 63 GFPYHSINTYLPKLVKAGYRVAICDQLEDPKLVK------GIVKRGVTELVTPG------ 110
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
V +D +SN + V +GK G +++STG+ + + +
Sbjct: 111 -VALNDDILQSKSNNFLASV----WLGK-----------QSCGAAFLDVSTGEFLVAQGD 154
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ + +L + P+ELL+ + K+
Sbjct: 155 KTYI----DKLLQNFRPSELLVAKHQKKE------------------------------- 179
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRHLKQ 381
E+ G+D H +E + D A Q L LK
Sbjct: 180 -----FAEHFGDDF----------------HCFYLEDWVFKDDYAQQVLTKHFQTNSLKG 218
Query: 382 FGL----ERIMCLGASFRSLSGSME-----------------MTLSANTLQQLEVLRNNS 420
FG+ E I+ GA LS + + L T++ LE+ N+
Sbjct: 219 FGIDELTEAILTAGAILYYLSETQHHQLQHITAIQRIAEEAYVWLDKFTIRNLELYAGNT 278
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
S +LL +++ TL+ GSR L+RW+ PL +LD + R
Sbjct: 279 TPS--VSLLDVIDKTLSPMGSRTLKRWLALPL-------KKLDKI----------RQRHE 319
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
V + K+ DV L V T+L R DI+R I+++ P E +
Sbjct: 320 VVDYFLKHIDV----------LEQVKTALSRMGDIERLISKVATLKINPREVV------- 362
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL-----LSTVNKE 595
QL E H L+K+L L +++ ++ KL LS E
Sbjct: 363 -------QLRASLE----------HIPLIKQLCLASANESLTLLGDKLHSCEQLSARIAE 405
Query: 596 AADQGDLLNLM---IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
+ +N+ I G +E+ R S K LD L+ ++ G+ +L+ + +
Sbjct: 406 TLSEDAPVNIAKGNAIVKGFSAELDELRGLSHSGKSYLDDLLLRESQRTGIPSLKIDNNN 465
Query: 653 GITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ IE+ K VP +W + + RY + E+ ++ A E++ + + +
Sbjct: 466 VFGYYIEVRNTHKDKVPPDWIRKQTLVNAERYITGELKEYEAKILGAEEKIAQLEQTLYA 525
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+ Y + Q + LDCL ATL+ N+ RP + +E I I GRHP
Sbjct: 526 ELIAFISEYIGQVQTNATLIGQLDCLCGFATLAMENNYHRP---EMNEGYAIEIKDGRHP 582
Query: 771 VLDTILLDN--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
V++ L ++ ND L ER+ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA+
Sbjct: 583 VIEKQLPVGTPYIANDVYLDRERQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPAA 642
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SA+L ++D I+TR+GASD+I G STF+ E+NEA+ IL N + +SLV++DE+GRGTST+D
Sbjct: 643 SAQLGIVDKIFTRVGASDNISMGESTFMVEMNEAALILNNISDRSLVLLDEIGRGTSTYD 702
Query: 889 GVAIAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
G++IA+A +YL EH K LF THY ++ ++ +F + Y+VS
Sbjct: 703 GISIAWAIAEYLHEHPSKAKTLFATHYHELNEMSEQFE-RIKNYNVSV-----------K 750
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V +L K+ G S SFG VA++A +P I +A + KLE
Sbjct: 751 ETKDSVLFLRKLTEGGSAHSFGIHVAKMAGMPQYVIQKANKMLKKLE 797
>gi|300711943|ref|YP_003737757.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
gi|448295633|ref|ZP_21485697.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
gi|299125626|gb|ADJ15965.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
gi|445583732|gb|ELY38061.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
Length = 882
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 263/931 (28%), Positives = 426/931 (45%), Gaps = 146/931 (15%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
P+ + + TP+ +Q +L +Y + L++ +VG + F E AE++A++L I
Sbjct: 8 PAKMKERHGELTPMMRQYCDLCERYDESLVLFQVGDFYETFCEAAEVSARLLEITLTKRE 67
Query: 139 N----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSAL 193
+ + A IP ++ L++AGF+V V Q + P +A G R ++ +
Sbjct: 68 DSTGTYPMAGIPIDSAESYIETLLDAGFRVAVADQVQD-------PEEASGVVDRAVTRI 120
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T TL AE + ED +NY+ + +D+ G + G+ +++S
Sbjct: 121 VTPGTLTEAE-LLRSED-----NNYVAALAEDES------------GDEREYGLAFLDVS 162
Query: 254 TGD-VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
TGD V G ++ +R + +PAE ++G L + G S+ V
Sbjct: 163 TGDFVATGAISEETIRDEIS----RFAPAEAIVGPGLE--------GFDGFDSDCMVTPY 210
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
F GA E++ Y E L+++ ++ G S E D + L
Sbjct: 211 DPSRFALEGA-RELLDSYFGTPEKRLASD----AEIRACGALLSYAEYARGGQDGRLDYL 265
Query: 373 ALTIRHLKQFGLERIMCLG-ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
HL ++ M L +FRSL +L R SE+ T+L +
Sbjct: 266 ----NHLTRYEPREYMLLDRVAFRSL--------------ELFEPRAVGGDSEH-TILGV 306
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T G R L W+ PL DR I ARLDAVSE +G T HD
Sbjct: 307 LDETACALGRRKLTDWLRRPLLDRARIEARLDAVSEWTTLVGPRETV-----HD------ 355
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--------LYAG 543
+LS V DI+R I R+ A + A+ + AG
Sbjct: 356 ---------LLSDVY-------DIERLIARVSRGRANARDLRALKDTLDRVPEIRAAMAG 399
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+ LH E RE + L+ R I A SP + +GD
Sbjct: 400 VESDTLH---ELREGLDELEGVRELIDRAI--AESPPI--------------EITEGD-- 438
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELP 661
+I+ G +++ R+ + KE +DSL R++ G+ +L+ F V G + P
Sbjct: 439 ---VIAPGYDADLDGLRETEREGKEWIDSLEARERERTGVDSLKVGFNQVHGYYIEVTNP 495
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+VP N+ + + K + R+++PE+ D++ A E + + +E G
Sbjct: 496 NLERVPENYTRRQTLKNSERFYTPELKQREDEIITAEERADDLEYELFVEVRQEVAGESE 555
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
QA + LA LD L +LA ++ + RP D EP I I GRHPV++ ++FV
Sbjct: 556 RVQAVAETLATLDVLVSLAAVAAKYGYARPEI--DEEP-GIAIEGGRHPVVERTQ-ESFV 611
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PN L + E ++TGPNM GKS Y+RQ+ALI I+AQ+GSFVPAS A + ++D ++TR
Sbjct: 612 PNGAELTPD-ERLAVLTGPNMSGKSTYMRQIALITILAQIGSFVPASRARIGIVDRVFTR 670
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD I GRSTF+ E++E + ILR + +SLV++DE+GRGTST DG+AIA A +Y+
Sbjct: 671 VGASDDIAGGRSTFMVEMSELATILRGASERSLVLLDEVGRGTSTADGLAIARAITEYVH 730
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
+ LF TH+ ++ ++ G + + +++D VT+ + V
Sbjct: 731 SEVGALTLFATHHHELTELADALAGGFNLHFAA------------TQTDDGVTFRHDVSR 778
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAK 992
G + +S+G +VA+ A +P + R+ + A+
Sbjct: 779 GAATASYGIEVARAAGVPDRVVERSRALVAE 809
>gi|429759390|ref|ZP_19291889.1| DNA mismatch repair protein MutS [Veillonella atypica KON]
gi|429179666|gb|EKY20905.1| DNA mismatch repair protein MutS [Veillonella atypica KON]
Length = 873
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 257/958 (26%), Positives = 435/958 (45%), Gaps = 167/958 (17%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
KK TP+ +Q +++K+++ D LL +G + F EDA +A++ L I +
Sbjct: 3 KKVTPMMEQYLDIKSRHSDELLFFRLGDFYELFNEDALIASRELNITLTGRPTGNEERTP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGPFGRGLSALYTKATLE 200
+P ++ LV G+KV + +Q E A+K G R + + T T+
Sbjct: 63 MCGVPFHAAESYIETLVKKGYKVAICEQLEDPKAVK-------GIVKRDVIQVITPGTVM 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E+G SN + + V + VF D +STG+V++
Sbjct: 116 T-------ENGNDARSNNFLALF---YLVKEAWILVFSD------------VSTGEVIW- 152
Query: 261 EFNDGFLRSGLEAVLLSLS---PAELLLGQP----------LSKQTEKMLLAYAGPASNV 307
D + + + SLS PAE+++ + + Q ++L+ +V
Sbjct: 153 ---DRVPQDNISQIYDSLSMYRPAEIIVPEGTILPQSIVDFIHNQFNNVVLSPFTSFESV 209
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL 367
C L+NN Q+M G+M L
Sbjct: 210 DFACK-------------------------LANNHFQDM-------------GLMEEDVL 231
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
A AL + +L+ I + + G+ + L ++L+ LE+ N +G GT
Sbjct: 232 A--ALGFMLLYLQDVIKTEIAHINYVHQMDVGN-RLILDTSSLRHLEITHNLRDGGVKGT 288
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL +++ TLT G+RLL++W+ PL D + I R AV+E+ G
Sbjct: 289 LLDVLDRTLTPMGARLLKQWLESPLTDISTIQRRQAAVAELISRNGER------------ 336
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
E Q Y L D +R + RI + +P +F ++ ++ L Q++
Sbjct: 337 ------CEIQGY---------LDCIYDFERIVGRIETGSVSPRDFTSLRES-LQVLPQIK 380
Query: 548 QL--HIDGEYREKVTSKTLHSA----LLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
L G + ++ H A LL R I A PA+ K +
Sbjct: 381 NLLKEFSGLSLSSINTRIDHHADIYDLLNRAI--AEQPALTLKDGR-------------- 424
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIEL 660
+I +G E+ R +++ L L + R++ G++ ++ V G +
Sbjct: 425 -----VIRDGYNEELDELRSLATNSEVWLQKLEDKAREETGLKLKTKYNKVFGYFFEVSK 479
Query: 661 PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
KVP + + +T RY +P++ ++ A E++ + + + + G
Sbjct: 480 SQIDKVPAYFIRKQTTVNAERYITPDLKEFEIKILSAKEKIVSLEQQLYQDLRDQIKGVI 539
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDN 779
+ Q +ALA LD L +LAT++ N++ P V + QI+I GRHPV++ L +
Sbjct: 540 KKVQETARALAELDVLASLATVAYESNYICPNIVMNG---QINIRDGRHPVIEKFLKREV 596
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
FVPND L+ + E +ITGPNM GKS Y+RQVA++ IMAQ+GSF+PA A + +D ++
Sbjct: 597 FVPNDVVLNHDDEEFMLITGPNMAGKSTYMRQVAILMIMAQIGSFIPAREATISPVDRVF 656
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR+GASD I G+STF+ E+ E +YIL N T++SL+I+DE+GRGTST DG++IA A +++
Sbjct: 657 TRVGASDDISTGQSTFMVEMKEVAYILENATSKSLIILDEIGRGTSTFDGLSIAQAVVEH 716
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
+ +H LF THY ++ ++ + + Y V+ + +D+ +L ++
Sbjct: 717 ICKHIHAKTLFATHYHELIPLEDVYP-RLKNYTVAV-----------KEKGKDIAFLRRI 764
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR--VQNRSAKRDLLVKLS 1015
+ G ++ S+G VA+LA LP + RA VI LE + + + NR D +VK +
Sbjct: 765 IRGGADRSYGIHVAKLAGLPAQVLKRAEVILESLEEQNTDTDDLNNRVITSDSVVKYT 822
>gi|291530258|emb|CBK95843.1| DNA mismatch repair protein MutS [Eubacterium siraeum 70/3]
Length = 870
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 260/921 (28%), Positives = 420/921 (45%), Gaps = 133/921 (14%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
+K TP+ QQ VE+K Y D +L +G + F EDA +A+K L + +P
Sbjct: 11 EKLTPMMQQYVEIKANYKDYILFYRLGDFYEMFNEDAMVASKELELTLTSRAGTPMCGVP 70
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
++++L++ GFKV + +QT A+ G R + L + T+ A +
Sbjct: 71 HHSAEGYIKKLIDKGFKVAICEQTTDPALSK------GLVERDIVRLVSAGTVIEASML- 123
Query: 207 GGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV-VYGEFNDG 265
EDG +NY+ C+ VG+ NG G+V +ISTG+V + N
Sbjct: 124 --EDGS---NNYISCIY-----VGE--NGT---------GMVFADISTGEVHAVEKANSK 162
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
+ A +P ELL + + A
Sbjct: 163 KTDEDIIAQFSQYTPVELLFNAEFLNRKQ---------------------------AYTF 195
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNH--RSAIEGIMNMPDLAVQALALTIRHL---K 380
+ + Y + LS+ + DV E +A E + D A++AL +R+L +
Sbjct: 196 IRNRYGKCSAEQLSDEDFSIDDVSEITAQFGGTADEIGLAGKDNALRALCALLRYLYKAQ 255
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ G +R + L S M L T + LE+ +G + G+LL +++ T T G
Sbjct: 256 RSGAKRFVKLNVH----SSGEFMQLGLATRRNLELTSTMRSGEKKGSLLWVLDKTDTSMG 311
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R LR+ + PL D I R DAV + + +
Sbjct: 312 RRKLRQCIEQPLTDTAAIIRRHDAVEALINNSAA-------------------------- 345
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L + T L + D++R +TRI ++ A + ++A+ + L QL D +++
Sbjct: 346 -LYDIKTDLAKVYDLERLMTRIIYKAANAKD----VKALGATCRILPQLKSD---LSQIS 397
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFSEVAR 618
++ LT S I + V + AD+ L + I NG E+ R
Sbjct: 398 TQ-----------LTRSLDKKISPLDDIADLVERAIADEPPALMKDGGYIKNGFNEELDR 446
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAKVNST 676
R K+ L + ++ G++NL + IE+ VP + + +
Sbjct: 447 LRNITGGGKDLLAQIEQQEKEATGIKNLRVGYNRVFGYYIEVSKGNVSMVPDRYVRKQTL 506
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF-QAAVQALAALDC 735
RY + E+ +++ AN+++ + AA + ++EF + Q +++AALD
Sbjct: 507 TNGERYITDELKKIENEILGANDKI-LALEAAIFAEVREFIAQRLDLIQQTAESVAALDV 565
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYC 794
L + A +S N+ RP+ +D I I GRHPV++ ++ + F PND L +
Sbjct: 566 LCSYAVVSIENNYCRPMMANDS---VIEIKDGRHPVVEKMVNEILFTPNDVYLDVKSNRL 622
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS ++RQVA+I +MAQ+G FVPAS A L V+D I+TR+GASD + G+ST
Sbjct: 623 MIITGPNMSGKSTFMRQVAVIVLMAQIGCFVPASYARLGVVDRIFTRVGASDDLSAGQST 682
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVTH 913
F+ E+ E + IL T SLVI+DE+GRGTST+DGV+IA A +Y+ C LF TH
Sbjct: 683 FMVEMTEVATILNEATRNSLVILDEIGRGTSTYDGVSIAKAVAEYISSKAIGCKTLFATH 742
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ ++ + G V Y V +S +D+ +L+K+V G ++ S+G +VA
Sbjct: 743 YHELISLENELDG-VRNYSVKV-----------KRSGEDIKFLHKIVEGGTDDSYGIEVA 790
Query: 974 QLAQLPPSCISRATVIAAKLE 994
+LA LP RA + A+LE
Sbjct: 791 RLAGLPKKVTDRAKQLLAELE 811
>gi|291519454|emb|CBK74675.1| DNA mismatch repair protein MutS [Butyrivibrio fibrisolvens 16/4]
Length = 814
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 260/900 (28%), Positives = 415/900 (46%), Gaps = 150/900 (16%)
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + ++ RLV+ G+KV + +Q E P +A G R + + T T
Sbjct: 10 VPFHAADTYINRLVSRGYKVAICEQVE-------DPKEAKGLVKREVIRVVTPGT---NI 59
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
D E+G +NY++ + GVFG V + +IST D E +
Sbjct: 60 DQMALEEGS---NNYIMSIF--------YNRGVFG--------VSSCDISTADFYLTEVD 100
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
+ +R L+ L +PAE++ S+ F G +
Sbjct: 101 N--VRKLLDE-LFRFNPAEIIY---------------------------SKSIFESGIDI 130
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA--IEGI--MNMPDLAVQALALTIRHL 379
EV E+ + D+ + E NH A +EG+ M P V A AL + +L
Sbjct: 131 TEVSQKLESALSQLDDSFFDETLSTREILNHFHAHSLEGLGLMEFPFGRVAAGAL-LSYL 189
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
K + L G M L +T + LE+ + + G+LL +++ T T
Sbjct: 190 KDTQKTELAHLTHITPYTDGKY-MLLDNSTRRNLELTETMRDKQKRGSLLWVLDKTKTAM 248
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G+R L+ +V PL + I R DA+SE+ ES+ I +
Sbjct: 249 GARQLKSFVEQPLLSVDEIIRRQDAISELNESL--------------------IDREELR 288
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
LSSV D++R IT+I +++A P + IA Q+I L + K
Sbjct: 289 EYLSSVY-------DLERLITKITYQSANPRDLIAFKQSI----GMLSPI--------KT 329
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ-------GDLLNLMIISNGQ 612
+ H LL + A I L ++ ++ GD II G
Sbjct: 330 LLASFHCHLLD------DTNANIDDMKDLYELIDAAIDEEPPISSRDGD-----IIKTGF 378
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNW 670
EV R R+A K+ L L R + G++NL+ +E+ ++K VP +
Sbjct: 379 NEEVDRLRRAKVDGKQWLAELEAKERDKTGIKNLKIKFNKVFGFYLEVTNSYKDLVPDYY 438
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + RY++PE+ D + A + L + + + Q +A+
Sbjct: 439 VRKQTLANAERYYTPELKELEDSILGAEDRLNTLEYEYFKTVRDTIASNVDRIQITAKAI 498
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHA 789
A LD + +LA ++ ++VRP+ D+ + I I GRHPV++ ++ D F+ ND L
Sbjct: 499 ALLDAMISLAVVAEKNHYVRPII--DNRGI-IDIKDGRHPVVEQMINADQFISNDCQLDL 555
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ IITGPNM GKS Y+RQVALI +MAQ+GSFVPASSA++ V+D I+TR+GASD +
Sbjct: 556 DSRTIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASSAQIGVVDRIFTRVGASDDLS 615
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
G+STF+ E+NE + IL N T +SL+I+DE+GRGTST+DG++IA++ ++++ L
Sbjct: 616 TGQSTFMVEMNEVANILHNATNKSLLILDEIGRGTSTYDGLSIAWSVVEHIAYKIGAKTL 675
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ T+ G + H +Y + + +G +D+ +L K++PG ++ S+G
Sbjct: 676 FATHYHEL----TELEGQIKGVH-NYCIAVQELG-------EDIIFLRKIIPGGADQSYG 723
Query: 970 FKVAQLAQLPPSCISRATVIAAKLE----AEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
+VA+LA LP +SRA I L A VS R+ R + L V +S+ E E
Sbjct: 724 IQVARLAGLPEEVLSRARTIVNSLNENDIAAVSDRISIREQVEEKLKSLEGVTISENEGE 783
>gi|256819680|ref|YP_003140959.1| DNA mismatch repair protein MutS [Capnocytophaga ochracea DSM 7271]
gi|256581263|gb|ACU92398.1| DNA mismatch repair protein MutS [Capnocytophaga ochracea DSM 7271]
Length = 860
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 261/930 (28%), Positives = 427/930 (45%), Gaps = 158/930 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----A 143
K TPL +Q ++K+KYPD LL+ VG + FGEDA AA L I +N A
Sbjct: 3 KETPLMKQYNQIKSKYPDALLLFRVGDFYETFGEDAVKAAHTLDIVLTNRNNGTERSELA 62
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
P +N ++ +LV AG++V + Q E + G RG++ L T
Sbjct: 63 GFPYHSINTYLPKLVKAGYRVAICDQLEDPKLVK------GIVKRGVTELVTPG------ 110
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD--VVYGE 261
V +D +SN + V +GK G +++STG+ V GE
Sbjct: 111 -VALNDDILQSKSNNFLASV----WLGK-----------QSCGAAFLDVSTGEFLVAQGE 154
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
++ ++ +L + P+ELL+ +KQ +K + G + CF
Sbjct: 155 ------KTYIDKLLQNFRPSELLV----AKQQKKEFAEHFGDDFH---------CF---- 191
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI----MNMPDLAVQALALTIR 377
E ++ + L+ + N +++G + L A+ +
Sbjct: 192 -YLEDWVFKDDYAQQVLTKHFQTN-----------SLKGFGVDELTEAILTAGAILYYLS 239
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+ L+ I + + ++ + L T++ LE+ N+ S +LL +++ TL+
Sbjct: 240 ETQHHQLQHITAI----QRIAEEAYVWLDKFTIRNLELYVGNTTPS--VSLLDVIDKTLS 293
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
GSR L+RW+ PL +LD + R V + K+ DV
Sbjct: 294 PMGSRTLKRWLALPL-------KKLDKI----------RQRHEVVDYFLKHIDV------ 330
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
L V T+L DI+R I+++ P E + QL E
Sbjct: 331 ----LEQVKTALSHMGDIERLISKVATLKINPREVV--------------QLRASLE--- 369
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKL-----LSTVNKEAADQGDLLNLM---IIS 609
H L+K+L L +++ ++ KL LS E + +N+ I+
Sbjct: 370 -------HIPLIKQLCLASANESLTLLGDKLHSCEQLSARIAETLSEDAPVNIAKGNAIA 422
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VP 667
G +E+ R S K LD L+ ++ G+ +L+ S + + IE+ K VP
Sbjct: 423 KGFSAELDELRGLSHSGKSYLDDLLLRESQRTGIPSLKIDSNNVFGYYIEVRNTHKDKVP 482
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+W + + RY + E+ ++ A E++ + ++ + + Y + Q
Sbjct: 483 PDWIRKQTLVNAERYITGELKEYETKILGAEEKIAQLEQSLYAELIAFISEYIGQVQTNA 542
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDT 785
+ LDCL + ATL+ N+ RP + +E I I GRHPV++ L ++ ND
Sbjct: 543 TLIGQLDCLCSFATLAMENNYHRP---EMNEGYAIEIKDGRHPVIEKQLPVGTPYIANDV 599
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L ER+ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA++A+L ++D I+TR+GAS
Sbjct: 600 YLDRERQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPAATAQLGIVDKIFTRVGAS 659
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-K 904
D+I G STF+ E+NEA+ IL N + +SLV++DE+GRGTST+DG++IA+A +YL EH
Sbjct: 660 DNISMGESTFMVEMNEAALILNNISDRSLVLLDEIGRGTSTYDGISIAWAIAEYLHEHPS 719
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
K LF THY ++ ++ +F + Y+VS ++ V +L K+ G S
Sbjct: 720 KAKTLFATHYHELNEMSEQFE-RIKNYNVSV-----------KETKDSVLFLRKLTEGGS 767
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
SFG VA++A +P I +A + KLE
Sbjct: 768 AHSFGIHVAKMAGMPQYVIQKANKMLKKLE 797
>gi|372208947|ref|ZP_09496749.1| DNA mismatch repair protein MutS [Flavobacteriaceae bacterium S85]
Length = 870
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 266/979 (27%), Positives = 448/979 (45%), Gaps = 148/979 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN---- 139
T KK TPL +Q +K+KYPD +L+ VG + FG DA A+VL I N
Sbjct: 4 TKAKKETPLMKQYNGIKSKYPDAMLLFRVGDFYETFGTDAIKCAQVLNITLTKRGNGSES 63
Query: 140 -FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
A P LN ++ +LV +G +V + Q E + RG++ L T
Sbjct: 64 ETALAGFPHHSLNTYLPKLVKSGLRVAICDQLEDPKMTK------TIVKRGVTELVTPG- 116
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
V ++ ++N + V FG LGV ++ISTG+ +
Sbjct: 117 ------VALNDEVLQSKNNNFLASVH------------FGKK---NLGVAFLDISTGEFL 155
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ + ++ + +L + SP+E+L+ K+ + G R D ++
Sbjct: 156 TAQGDVSYI----DKLLQNFSPSEVLV----EKKNKLFFTENFGD----RFHTFYLDDWV 203
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
A SL ++ ++L IEG+ D + A + +
Sbjct: 204 FQTEFAN-ESLLKHFDVNSLKG---------------YGIEGL----DQGIIASGAVLYY 243
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L + ++ + S + + + + + T++ LE+ ++ + + TLL I++ T +
Sbjct: 244 LSETHHSKLQHI-TSIQRVHENEYVWMDRFTIRNLELYQSTNENA--ITLLSIIDQTHSP 300
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G+RLL+RW+ PL + + I R + VS H++ F
Sbjct: 301 MGARLLKRWMALPLKETSQIVKRHEVVSYFM-------------NHED-----------F 336
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
Y + + DI+R I+++ P E + + Q++ + + E +
Sbjct: 337 Y---QKTTYQIKQISDIERLISKVATGKINPREVVYLKQSL----DAILPIKNAAEESDN 389
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
+T KT+ L +L + + + A + +++K A I+ G +E+
Sbjct: 390 ITLKTMGEQLQDCTLLRETIAKTLVEDAPV--SIHKGNA----------IAGGISTELDE 437
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNST 676
R S KE LD+L+ ++ G+ +L+ F +V G + KVP W + +
Sbjct: 438 LRTISNSGKEYLDNLVQREIERTGIPSLKIAFNNVFGYYIEVRNTHKDKVPEEWIRKQTL 497
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
RY + E+ ++ A E++ ++ + + ++ Y Q +A LDCL
Sbjct: 498 VNAERYITEELKEYESKILGAEEKIGLLEQQLFSELIQFLIDYIQPIQLNANLIAQLDCL 557
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYC 794
ATL+ N ++VRP +DD +I I +GRHPV++ L + ++ ND +L+ ++
Sbjct: 558 CGFATLAINNSYVRPT-IDD--STEIDIKNGRHPVIEKQLTFGEEYIANDISLNRSQQQI 614
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNM GKS +RQ ALI ++AQ+GS+VPA A + V+D I+TR+GASD+I G ST
Sbjct: 615 IMITGPNMSGKSAILRQTALIVLLAQIGSYVPAQQARIGVVDKIFTRVGASDNISMGEST 674
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLFVTH 913
F+ E+NE + IL N + +SL+++DE+GRGTST+DG++IA+A +YL EH K LF TH
Sbjct: 675 FMVEMNETASILNNVSERSLILLDEIGRGTSTYDGISIAWAIAEYLHEHPSKAKTLFATH 734
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ D+ FT + ++VS + V +L K+ G SE SFG VA
Sbjct: 735 YHELNDMSKTFT-RIKNFNVSV-----------KELKDKVIFLRKLTAGGSEHSFGIHVA 782
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFY 1033
+LA +P I RA + +LE S +QN AK EQ QE E F
Sbjct: 783 KLAGMPQPVIHRANKMLQQLEN--SHGLQNNKAKL---------EQATQE------EDFQ 825
Query: 1034 LGRVEASEDLISAYRDLFL 1052
L + + L+ +D L
Sbjct: 826 LSFFQLDDPLLEDIKDEIL 844
>gi|153814910|ref|ZP_01967578.1| hypothetical protein RUMTOR_01125 [Ruminococcus torques ATCC 27756]
gi|317500422|ref|ZP_07958646.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
8_1_57FAA]
gi|145847941|gb|EDK24859.1| DNA mismatch repair protein MutS [Ruminococcus torques ATCC 27756]
gi|316898177|gb|EFV20224.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
8_1_57FAA]
Length = 877
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 260/967 (26%), Positives = 433/967 (44%), Gaps = 209/967 (21%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
+Q +E K++Y D +L +G + F EDA A++ L G + +P
Sbjct: 3 KQYMETKSQYQDCILFYRLGDFYEMFFEDALTASRELEITLTGKNCGQEEKAPMCGVPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT---LEAAEDV 205
+ ++ RLV G+KV + +Q E G R + + T T +A ++
Sbjct: 63 AVEGYLNRLVAKGYKVAICEQVEDPKT------TKGIVKREVVRIVTPGTNLDTQALDET 116
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
++NY++C+V D R GV +ISTGD E D
Sbjct: 117 ---------KNNYIMCIV------------YIAD----RYGVSVADISTGDYFVTEIPDS 151
Query: 266 FLRSGLEAVLLSLSPAELLLGQPL---------------------------SKQTEKMLL 298
+ L + SP+E++ + + K LL
Sbjct: 152 ---AKLLDEIYRFSPSEIICNEAFYMSGVDMDGMKDRLGITIYSLESWYFDDEVCRKKLL 208
Query: 299 AYAGPASNVRVECASRDC-FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA 357
+ +S + A DC I GAL + + +++LSN
Sbjct: 209 EHFEVSSFAGLGLADYDCGIISAGALLQYLL---ETQKNSLSN----------------- 248
Query: 358 IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR 417
+ H+ + + M + +S R L+ E LR
Sbjct: 249 ------------------LTHITPYAAGKFMMIDSSTR------------RNLELCETLR 278
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
+ G+LL +++ T T G+R LR++V PL D+ I RLDAV E+ E S
Sbjct: 279 EK---QKRGSLLWVLDKTKTAMGARTLRKYVEQPLIDKTEIIRRLDAVQELKEQAIS--- 332
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA--- 534
E + ++ LS V D++R IT+I + +A P + A
Sbjct: 333 REEIREY-----------------LSPVY-------DLERLITKIAYGSANPRDLTAFRS 368
Query: 535 ---VMQAILYAGKQ-----LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
++ A+LY ++ L+ L +D + E + L+K+ I P +
Sbjct: 369 SLEMLPALLYILQEMKAELLKDLAVDLDPLEDL------CILVKKAI--REDPPI----- 415
Query: 587 KLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
A +G+++N +G EV + R+A K+ L L N R++ G++NL
Sbjct: 416 ---------AMKEGNIIN-----DGYNEEVDKLRRAKSDGKDWLAKLENDEREKTGIKNL 461
Query: 647 EFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIV 704
+ + +E+ ++K VP + + + RY +PE+ D + A ++L +
Sbjct: 462 KIKYNKVFGYYLEVTNSYKEMVPEYYTRKQTLANAERYITPELKELEDMILGAEDKLYAL 521
Query: 705 CRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHI 764
+ Q +A+AALD +LA ++ N+VRP +E I I
Sbjct: 522 EYELYSEVRDLIASQIERIQKTAKAVAALDAFASLALVAERNNYVRPKI---NEKGVIDI 578
Query: 765 CSGRHPVLDTILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
GRHPV++ ++ + F+ NDT L ++ IITGPNM GKS Y+RQ ALI +MAQ+GS
Sbjct: 579 KEGRHPVVERMIPNEMFISNDTYLDDKKHRISIITGPNMAGKSTYMRQTALIALMAQIGS 638
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
FVPA SA + + D I+TR+GASD + G+STF+ E+ E + ILRN T++SL+I+DE+GRG
Sbjct: 639 FVPAKSANIGLSDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRG 698
Query: 884 TSTHDGVAIAYATLDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV 941
TST DG++IA+A ++Y+ + + LF THY ++ +++ K +V Y ++
Sbjct: 699 TSTFDGLSIAWAVIEYISDSRLLGAKTLFATHYHELTELEGKI-DNVNNYCIA------- 750
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE-VSSR 1000
+ K D D+ +L K+V G ++ S+G +VA+LA +P I RA I +L E +++R
Sbjct: 751 ---VKEKGD-DIVFLRKIVKGGADKSYGIQVAKLAGVPELVIGRAKEIVEELSDEDITAR 806
Query: 1001 VQNRSAK 1007
V ++K
Sbjct: 807 VSEIASK 813
>gi|298373977|ref|ZP_06983935.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_1_19]
gi|298268345|gb|EFI10000.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_1_19]
Length = 870
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 256/925 (27%), Positives = 430/925 (46%), Gaps = 146/925 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH-----LDHNFMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA + A++LGI + + A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVIGAEILGIVQTKRANGVGQHVEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + V G F ++ISTG+ + E +
Sbjct: 120 ILNHK-----ENNFLASI--------HFAKEVCGISF--------LDISTGEFMTAEGSI 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP R D +I
Sbjct: 159 DYI----DKLLNNFSPKEVLIERGNKKRFEEAF----GP----RFFIFELDDWIF----- 201
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
T S ED+ + E N + G+ ++ L + A + +L Q
Sbjct: 202 ------------TTSAAEDRLLKHFETKNLKGF--GVQHL-KLGIIASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I + A R + + L T++ LE++ + E +LL +++ T++ GSR+L
Sbjct: 247 THISHITALSR-IEEDRYVRLDKFTVRSLELV--GTMNDEGTSLLDVIDKTISPMGSRML 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
RRW+ PL D I R + V D EP+ +L +
Sbjct: 304 RRWILFPLKDVKPIQERQEVV------------------------DYFFREPETKELLDT 339
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
L +G D++R I+++ +P E + + A+ + GE + L
Sbjct: 340 QLEQIG---DLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACMASGEPSLCRIGEQL 396
Query: 565 HS-ALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
++ AL++ I + P+++ K + VN+E D R
Sbjct: 397 NACALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDD--------------------LR 436
Query: 621 KAVQSAKEELDSLINMCRKQL---GMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNS 675
S K D L+ + ++++ G+ +L+ F +V G + KVP NW + +
Sbjct: 437 AIAYSGK---DYLLKVQQREIELTGIPSLKIAFNNVFGYYIEVRNTHKDKVPANWIRKQT 493
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY + E+ +++ A E++ + ++ + Y Q + +DC
Sbjct: 494 LVNAERYITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRIDC 553
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L + A + ++RPV D +I I GRHPV++ L + ++ ND L E++
Sbjct: 554 LLSFAKAAEANKYIRPVVSDSD---KIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQ 610
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS +RQ ALI +MAQ+G FVPA SA + ++D I+TR+GASD+I G S
Sbjct: 611 IIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGES 670
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFV 911
TF+ E+NEAS IL N T++SLV+ DELGRGTST+DG++IA+A ++Y+ EH K LF
Sbjct: 671 TFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFA 730
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ F + Y+VS K +G V +L K++PG SE SFG
Sbjct: 731 THYHELNEMERAFK-RIKNYNVSV----KEVG-------NKVIFLRKLIPGGSEHSFGIH 778
Query: 972 VAQLAQLPPSCISRATVIAAKLEAE 996
VA++A +P S + R+ I +LE+E
Sbjct: 779 VAKMAGMPKSIVKRSNEILKQLESE 803
>gi|209363939|ref|YP_001424366.2| DNA mismatch repair protein MutS [Coxiella burnetii Dugway 5J108-111]
gi|207081872|gb|ABS76827.2| DNA mismatch repair protein [Coxiella burnetii Dugway 5J108-111]
Length = 871
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 254/939 (27%), Positives = 422/939 (44%), Gaps = 149/939 (15%)
Query: 81 SQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----- 133
S TT N ++TP+ +Q + +K +YPD+L+ +G + F +DA+ AAK+L I
Sbjct: 19 SPTTQNDFSQHTPMMRQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARG 78
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
H A +P + ++ +LV G V + +Q A GP R ++ +
Sbjct: 79 QSAGHAIPMAGVPYHAVENYLTKLVRLGESVVICEQIGDPATSK------GPVAREVTRI 132
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T T+ + D N L+ + + R G+ ++I+
Sbjct: 133 ITPGTVSDEALLDEHRD------NTLMVIHQEKD----------------RFGIATLDIT 170
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G + E + L A + + PAELL+ + S K A +++
Sbjct: 171 SGRFLIQEI---ISENALFAEIERIRPAELLISEENSVHPLK--------ADSIKRRPPW 219
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA-- 371
F AL + ++ D GI ++P LA+ A
Sbjct: 220 E--FDHATALTLLCQQFQTKSLDGF---------------------GITHLP-LAITAAG 255
Query: 372 -LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L + + ++ L I + A + + ANT + LE++ N G E +L
Sbjct: 256 CLLQYVNYTQKSALPHIHSIQAE----QNEEALFIDANTRRNLELI-TNLQGEEVHSLAW 310
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T GSRLLRRW+ PL D+ L+ R +AVS
Sbjct: 311 LLDHTATPMGSRLLRRWINRPLRDQILLQQRQNAVS------------------------ 346
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQ 547
T++E + Y S + +L D++R + RI R+A P + + + QA+ +QL
Sbjct: 347 -TLLEKRNY---SEIYENLRHIGDLERIVARIALRSARPRDLMQLRQALGVLPTLHQQLT 402
Query: 548 QLHIDGEYREKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L ++ + +E + L L + L + + P VI D G
Sbjct: 403 NLPLNKQLQEIKNNLGLFDELFRLLQKAIIENPPIVI--------------RDGG----- 443
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
+I++G + + R ++ + L L R++ + L+ + + G I
Sbjct: 444 -VIADGYDAPLDELRNMSTNSHQFLIDLEQQERERTKINTLKVGYNRIHGYYIEISRAQA 502
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ P + + + K RY +PE+ D++ + + ++ L
Sbjct: 503 KQAPTEYIRRQTLKNVERYITPELKIFEDKVLSSRSRALAREKELYEQLLDTLIEKLIPL 562
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
Q A+A LD L+ LA + NF P F D P+ I I +GRHP+++ ++ D F+PN
Sbjct: 563 QQCASAIANLDVLNTLAERADTLNFNAPQFCD--YPI-IKIEAGRHPIVENVMTDPFMPN 619
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT+L +R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA +A+L +D I+TR+G
Sbjct: 620 DTHLDEKRRML-IITGPNMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIG 678
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + GRSTF+ E+ E + IL N T +SLV++DE+GRGTST DG+++AYA YL
Sbjct: 679 AADDLASGRSTFMVEMTETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATK 738
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K LF THY ++ + + +V H+ + + ++ + +L+ + G
Sbjct: 739 LKAFALFATHYFELTALASTLP-AVKNVHLDAV-----------EHEEKIIFLHALREGP 786
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+ S+G +VAQLA +P S I A +LE V S Q
Sbjct: 787 ANKSYGLQVAQLAGIPRSVIQHARQKLEELENPVISETQ 825
>gi|321469768|gb|EFX80747.1| putative MSH6, mismatch repair ATPase [Daphnia pulex]
Length = 1310
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 266/1000 (26%), Positives = 449/1000 (44%), Gaps = 127/1000 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P P ++ IP Q+ TP +Q E+KT DV+L +VG + +
Sbjct: 350 RRPDDPDYDPRSIY-IPDSFKQS-----LTPAMRQWWEMKTNNFDVILFFKVGKFYELYH 403
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAI---KA 177
DA +A K LGI + + P + +L+ G+KV V+QTET + +
Sbjct: 404 TDALIAVKELGIIL-MKGDHAHCGFPERGFAKYSSQLIEKGYKVARVEQTETPEMMTERC 462
Query: 178 HGPGKAGPFGRGLSALYTKATLEAAEDVGGGE-DGCGGESNYLVCVVDDDGNVGKIRNGV 236
+ F R + + T E D E ++L+ + + G+
Sbjct: 463 KRMSRPTKFDRVVEREVCQITSRGTRTYNAIEGDNWQVEHHFLMALWEKSGSEAA----- 517
Query: 237 FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKM 296
G V GV V+ S G G+F D RS L +L +P E++ +
Sbjct: 518 ---GGKVEFGVAFVDTSIGSFQLGQFGDDRYRSRLSTLLTRYNPVEIISAKRGVSNDTTQ 574
Query: 297 LLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQ----- 351
+ A P + + ++ +C+ L SL E+ D N D +D PE
Sbjct: 575 VWNAACPNALHEMVSSNAECWDPAKTL---RSLAES---DYFKVNGD--LDWPEGIRPLL 626
Query: 352 GNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR------------SLSG 399
+ S +LA++AL +LK+ L++ + SF+ ++ G
Sbjct: 627 DDSSSLGLAAKEESELAIRALGALHWYLKECKLDQELLSRRSFQIYYPIDEESQENAIFG 686
Query: 400 SMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLIS 459
S M L TL+ L+VL N+S G+ G+LL +N T +G R+LR W+ PLC ++ I
Sbjct: 687 S-HMVLDGMTLRNLDVLVNSSTGTTTGSLLERLNRCNTAFGQRMLRHWLCAPLCQQDAID 745
Query: 460 ARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGI 519
RLDAV + + + E VG+ +L SL PD++R +
Sbjct: 746 DRLDAVEYLLSNTAAI---EEVGK---------------------ILKSL---PDLERLV 778
Query: 520 TRIFHRTAT------PSEFIAVMQAILYAGKQLQQ--LHIDG-----EYREKVTSKTLHS 566
+I + ++ P A +Y+ K++ L ++G + E T+ S
Sbjct: 779 NKIHSQGSSLKAKNHPDSRAIFFDAPIYSKKKITDFLLTLEGFRSAQKVEEYFREYTIIS 838
Query: 567 ALLKRLILTASSPAVIGKAAKLLSTV-----NKEAADQGDLLNLMIISNGQFSEVARARK 621
LL++ + AS + L +++AA +G M+ G + +A +
Sbjct: 839 KLLRQSVKLASQGGEFPDMDEELEFFRLAFDHQQAAKEG----TMVPRPGVDKQYDQALE 894
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP------ANFKVPLNWAKVNS 675
+ + + + + ++ G + + F+ +E+ AN K L
Sbjct: 895 RIAEVQADAEKYLLDQKRHFGGK-VSFVGTDKKRFQLEVSEAAASRANHKYELQ----GQ 949
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
K RY++ E + Q+ A E+ + ++F ++ ++ A++ LA LD
Sbjct: 950 RKGFKRYYTNESRVLIQQMLAAEEQRNSALKDISRRIFEQFDNHHLLWEKAIKCLAVLDV 1009
Query: 736 LHALATLSRNKNFVRPVFV---DDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHA-- 789
+ AL + ++ RP + + P + + GRHP ++ F+PND + +
Sbjct: 1010 VLALTAFAADQKVCRPRIIPPGSNQRPF-LRLIQGRHPAHSQQFANSEFIPNDVTIGSGV 1068
Query: 790 -EREYCQI--------ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
E+ Q+ +TGPNMGGKS +RQV L I+AQ+GSFVPA EL +D ++T
Sbjct: 1069 VEQSDSQVDADHSLTLVTGPNMGGKSTLMRQVGLCVILAQMGSFVPAEEFELTPVDRLFT 1128
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+GA+D I G STF EL+E + IL++ T SLV++DELGRGT+T DG AIAY+ +D+
Sbjct: 1129 RLGANDHILGGESTFFVELSETAAILKHATLHSLVLLDELGRGTATFDGTAIAYSVVDH- 1187
Query: 901 LEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
L ++C LF THY + D+ + +G H++ + + +D S +++ +LY+
Sbjct: 1188 LARRQCRTLFSTHYHSLVHDLTSHPQVRLG--HMACMVEND--EEVDDPSQENIIFLYQF 1243
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
V G S+GF A+LA L S ISR A ++E+++ S
Sbjct: 1244 VDGACPKSYGFHAARLAGLERSIISRGFQQAKRMESKMLS 1283
>gi|33596868|ref|NP_884511.1| DNA mismatch repair protein MutS [Bordetella parapertussis 12822]
gi|33573569|emb|CAE37563.1| mismatch repair protein [Bordetella parapertussis]
Length = 913
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 274/947 (28%), Positives = 427/947 (45%), Gaps = 143/947 (15%)
Query: 70 PHTLNPIPTPSSQTTHNK--KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAA 127
P T+ P+ + QTT + +TP+ QQ + LK + +LL +G + F EDAE AA
Sbjct: 25 PDTILPMSSTPKQTTGDALAGHTPMMQQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERAA 84
Query: 128 KVLGIYAHLDHN-----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPG 181
++L + N A IP + ++ RLV G V + +Q + AA K
Sbjct: 85 RLLNLTLTKRGNSNGTPIPMAGIPVHAMEQYLARLVALGESVAICEQIGDPAAAK----- 139
Query: 182 KAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF 241
GP R + + T TL + D + VCV GK
Sbjct: 140 --GPVERRIVRIVTPGTLTDEALLPAKAD----RALAAVCVT------GK---------R 178
Query: 242 DVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYA 301
+ R G+ + +++G E G LE+ L ++PAEL+ Q E L A
Sbjct: 179 EPRAGLAWLNLASGAFHVTECAPG----QLESELHRIAPAELI-------QAESAELHMA 227
Query: 302 GPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI 361
+ RV F GA A++++ ++ D+L + ++M +A+
Sbjct: 228 FEGARTRVPDWH---FEADGARAQLLAHFKT---DSLGGFDVEDMP--------AAVCAA 273
Query: 362 MNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSN 421
+ A + + + H++ ER + L T + LE L +
Sbjct: 274 GALLRYAARTQSQALAHVQTIAAER------------PGQYVLLDPVTRRNLE-LTQTLS 320
Query: 422 GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESV 481
G E TL +++ T GSRLLRRW+ HPL + + AR A++ T +V
Sbjct: 321 GEESPTLFSLLDGCRTPMGSRLLRRWLHHPLRENEPVLARQHAIA----------TMLTV 370
Query: 482 GQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY 541
Q E+ +L ++ +L PDI+R R+ R+ P E ++ A++
Sbjct: 371 RQEGEQAFAAA-------GLLETLRDALNAFPDIERIAARVALRSVRPRELASLRDALV- 422
Query: 542 AGKQLQQLH-----IDGEYREKVTSKTLH-----SALLKRLILTASSPAVIGKAAKLLST 591
L LH + G R + + L LL R + AS PAV +
Sbjct: 423 ---ALPALHASLAPLSGSPRARELAAQLAMPPDIGELLARAV--ASEPAVAIR------- 470
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFM 649
D G +I+ G SE+ R + L L R++ G+ NL EF
Sbjct: 471 ------DGG------VIAAGFDSELDELRALATDGGDFLVQLEARERERTGIGNLRVEFN 518
Query: 650 SVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW 709
V G + KVP ++ + + K RY +PE+ T D++ A + + +
Sbjct: 519 RVHGFYIEVSKGQTDKVPEDYRRRQTLKNAERYITPELKTWEDRVLSAQDRSLAREKWLY 578
Query: 710 DSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRH 769
+ L Y ALA LD L ALA +R ++V P +D E I I +GRH
Sbjct: 579 EQLLDALAQYVRPLSQCASALAELDTLAALAEHARRHDWVAPELIDGAE---IDIEAGRH 635
Query: 770 PVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
PV++ + + F PN L R +ITGPNMGGKS Y+RQVALI ++A+ GSFVPA+
Sbjct: 636 PVVERAI-ERFTPNGCRLDQTRRML-LITGPNMGGKSTYMRQVALIALLARTGSFVPATR 693
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
A + LD I+TR+GA+D + GRSTF+ E+ EA+ IL T SLV++DE+GRGTST+DG
Sbjct: 694 ARVGRLDRIFTRIGAADDLAGGRSTFMMEMTEAAAILAASTPASLVLMDEIGRGTSTYDG 753
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKS 949
+A+A+A LL H + + LF THY ++ T+ T +L + + G
Sbjct: 754 LALAWAIAYRLLTHNRALTLFATHYFEL----TRLPAEQPTAANVHLAAAESAG------ 803
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ +L++V G + S+G +VAQ A +P + I +A+ +LEA+
Sbjct: 804 --GIVFLHEVREGPASRSYGIQVAQRAGVPAAVIRQASRELERLEAQ 848
>gi|448087041|ref|XP_004196240.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
gi|359377662|emb|CCE86045.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
Length = 1244
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 264/1017 (25%), Positives = 446/1017 (43%), Gaps = 132/1017 (12%)
Query: 21 TASSSASSPRPPQ--QTPPPKIAATVSFSPAKRKVVSSLFPPKTPKK-----PKLSPHTL 73
TA+SS S P+ + P A+ SF+ + L K +K P+ TL
Sbjct: 274 TANSSYSVDLKPEVSRKPVSTAASKKSFTKENEERYQWLVNIKDAQKRPIDDPEYDSRTL 333
Query: 74 NPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV--LG 131
IP + + +T E+Q E+K+K D ++ + G + + DAE+A L
Sbjct: 334 Y-IPQSAWSS-----FTAFEKQYWEIKSKMWDTVVFFKKGKFYELYENDAEIANTEFDLK 387
Query: 132 IYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP---FGR 188
+ N A IP + ++ G+KV V Q ET K G R
Sbjct: 388 LAGGGRANMKLAGIPEMSFEYWAKEFIDHGYKVAKVDQKETLLAKEMRGGSTKEEKIIKR 447
Query: 189 GLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVG--KIRNGVFGDGFDVRLG 246
LS + T TL + +++DD +V IR + +G + G
Sbjct: 448 ELSGILTGGTLTD------------------LNMINDDMSVYCLSIREEILENGCKL-FG 488
Query: 247 VVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN 306
+ V+ +T ++ EF D + L+ ++ + P E++ + +L + +SN
Sbjct: 489 IAFVDTATSELNLIEFTDDQECTKLDTLITQVKPKEIICEKNNLCSIAVKILKFCSHSSN 548
Query: 307 VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
+ ++E Y+ + + + D+ + ++ S + +
Sbjct: 549 --------QIWNNLNPVSEFWD-YDTTLQKLIKGGYYEAQDLDDFSHYPSTLVQYKDEKK 599
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANT----------LQQLEVL 416
A A + +L R + L +S SL E +S NT L LEVL
Sbjct: 600 CAFHAFGGLLFYL------RFLKLDSSILSLGNIKEYIISKNTATHLILDGVSLSNLEVL 653
Query: 417 RNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYR 476
N+ +G++ GTL ++N +T +G R+L+ W+ HPL D I+ R D++
Sbjct: 654 NNSFDGTDRGTLFKLINRAITPFGKRMLKTWLLHPLMDIKKINERFDSIDFFM------- 706
Query: 477 TSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVM 536
N + +F +L L SL PD++R + RI +T +F+ V+
Sbjct: 707 -----------NGGI-----EFREMLEKTLNSL---PDLERLLARIHGKTLKFKDFLRVV 747
Query: 537 QAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA 596
++ K + D E+ + L+S + I K + + ++A
Sbjct: 748 ESYESIAKLTSSIK-DYEF---TNTGALYSYI-----------TYIPKELETCISHWEDA 792
Query: 597 ADQGDLLNLMIIS-NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT 655
D+ + L+ I+ G SE + +A+ + + +L+ + RK+ + +
Sbjct: 793 FDRTEALSDNIVPMKGVDSEFDNSSEALATLETQLEDHLRTYRKEFKSNEICYKDSGKEV 852
Query: 656 HLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
+LIE+P K +P +W ++ ST K RY SPEV + +L E +VC +
Sbjct: 853 YLIEVPNKIKNIPNDWQQMGSTSKVKRYWSPEVRKLVRELLEQRELHKMVCETLKFRMYE 912
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSGRHPVL 772
+F Y+ + +Q LA +DCL AL S F RP F++ ++ Q+ RHP
Sbjct: 913 KFEKDYSTYMRTLQILAKIDCLIALTKTSETIGFPSCRPTFIESNKG-QVEFKELRHPCF 971
Query: 773 DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
+F+PND L + ++TG N GKS +R AL I++Q+G +VPAS A L
Sbjct: 972 TGT--KDFIPNDVVLGGCKPNIGLLTGANAAGKSTIMRTTALAIILSQIGCYVPASFAAL 1029
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
+D I TR+GA+D+I QG+STF EL+E IL T +S VI+DELGRG S+ DG +I
Sbjct: 1030 TPVDRIMTRLGANDNIMQGKSTFFVELSETKRILSRTTPKSFVILDELGRGGSSSDGFSI 1089
Query: 893 AYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV----MGPMDSK 948
A A L ++ H + + F TH+ GS+G +S+ ++ MG + +
Sbjct: 1090 AEAVLHHIATHIQSLGFFATHF-----------GSLG---LSFRNHPQIRPMRMGILVDE 1135
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRS 1005
+ +++T+LYK+ G + SFG VA + + +S A A E E SR++ S
Sbjct: 1136 NTRNITFLYKLEEGTAPGSFGMNVAAMCGIAEEIVSNAERAAE--EYEKQSRIKRHS 1190
>gi|423333984|ref|ZP_17311765.1| DNA mismatch repair protein mutS [Parabacteroides distasonis
CL03T12C09]
gi|409226133|gb|EKN19043.1| DNA mismatch repair protein mutS [Parabacteroides distasonis
CL03T12C09]
Length = 870
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 256/925 (27%), Positives = 430/925 (46%), Gaps = 146/925 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH-----LDHNFMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA + A++LGI + + A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVIGAEILGIVQTKRANGVGQHVEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + V G F ++ISTG+ + E +
Sbjct: 120 ILNHK-----ENNFLASI--------HFAKEVCGISF--------LDISTGEFMTAEGSI 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP R D +I
Sbjct: 159 DYI----DKLLNNFSPKEVLIERGNKKRFEEAF----GP----RFFIFELDDWIF----- 201
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
T S ED+ + E N + G+ ++ L + A + +L Q
Sbjct: 202 ------------TTSAAEDRLLKHFETKNLKGF--GVQHLK-LGIIASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I + A R + + L T++ LE++ + E +LL +++ T++ GSR+L
Sbjct: 247 THISHITALSR-IEEDRYVRLDKFTVRSLELV--GTMNDEGTSLLDVIDKTISPMGSRML 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
RRW+ PL D I R + V D EP+ +L +
Sbjct: 304 RRWILFPLKDVKPIQERQEVV------------------------DYFFREPETKELLDT 339
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
L +G D++R I+++ +P E + + A+ + GE + L
Sbjct: 340 QLEQIG---DLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACMASGEPSLCRIGEQL 396
Query: 565 HS-ALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
++ AL++ I + P+++ K + VN+E D R
Sbjct: 397 NACALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDD--------------------LR 436
Query: 621 KAVQSAKEELDSLINMCRKQL---GMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNS 675
S K D L+ + ++++ G+ +L+ F +V G + KVP NW + +
Sbjct: 437 AIAYSGK---DYLLKVQQREIELTGIPSLKIAFNNVFGYYIEVRNTHKDKVPANWIRKQT 493
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY + E+ +++ A E++ + ++ + Y Q + +DC
Sbjct: 494 LVNAERYITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRIDC 553
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L + A + ++RPV D +I I GRHPV++ L + ++ ND L E++
Sbjct: 554 LLSFAKAAEANKYIRPVVSDSD---KIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQ 610
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS +RQ ALI +MAQ+G FVPA SA + ++D I+TR+GASD+I G S
Sbjct: 611 IIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGES 670
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFV 911
TF+ E+NEAS IL N T++SLV+ DELGRGTST+DG++IA+A ++Y+ EH K LF
Sbjct: 671 TFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFA 730
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ F + Y+VS K +G V +L K++PG SE SFG
Sbjct: 731 THYHELNEMERAFK-RIKNYNVSV----KEVG-------NKVIFLRKLIPGGSEHSFGIH 778
Query: 972 VAQLAQLPPSCISRATVIAAKLEAE 996
VA++A +P S + R+ I +LE+E
Sbjct: 779 VAKMAGMPKSIVKRSNEILKQLESE 803
>gi|342213683|ref|ZP_08706405.1| DNA mismatch repair protein MutS [Veillonella sp. oral taxon 780
str. F0422]
gi|341597708|gb|EGS40250.1| DNA mismatch repair protein MutS [Veillonella sp. oral taxon 780
str. F0422]
Length = 836
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 254/930 (27%), Positives = 416/930 (44%), Gaps = 155/930 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
KK TP+ +Q +K +Y LL +G + F +DA A++ L I A +
Sbjct: 3 KKQTPMMEQYFSIKARYEKELLFFRLGDFYELFYDDAITASRELNITLTGRNAGEEDKAP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
+P ++ +L++ G+KV + +Q E P +A G R + + T T+
Sbjct: 63 MCGVPFHSAESYIEKLISKGYKVAICEQVE-------DPKEAKGIVKRDVIRVITPGTVL 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ G +DG E+N+L + G R +F D I+TG+V++
Sbjct: 116 SE---NGTKDG---ENNFLALTYETGGQ----RIVLFTD------------ITTGEVIW- 152
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQP----------LSKQTEKMLLAYAGPASNV-RV 309
E D S L P EL+L L++Q + L+ P + +
Sbjct: 153 ERMDSSSESSLFDAFTMYQPKELILAGSSELPTSIQDFLTRQMSGIALSPFTPTETIDNI 212
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
R+ F G L E + E +G L E D
Sbjct: 213 RLKGREHFSDAGLLEE--DVLEALGYVILYLQEIIKTDTSH------------------- 251
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
I ++ Q LS M L + L+ LE+ RN +GS+ GTLL
Sbjct: 252 ------INYVHQ---------------LSVGDRMILDTSCLRHLEITRNVRDGSKKGTLL 290
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ TLT G+R+L++W+ HPL D + I R + E
Sbjct: 291 DVLDKTLTPMGARMLKQWIEHPLMDIHRIVRRQMGIGE---------------------- 328
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
+I P L S+LTS+ D +R ++R+ + +P +F ++ ++ L+ L
Sbjct: 329 --SIDNPTMRSQLRSLLTSV---YDFERILSRVETGSVSPRDFTSLRES-------LRVL 376
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMI 607
+ E + TS L ++I L + + DQ L + +
Sbjct: 377 PMIQEVIQHCTSNILQDC-----------HSMIHTHNDLCDLLTRAIVDQPSLALKDGHV 425
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPANFKV 666
I +G +E+ R +++E L L ++ G+R + V G + V
Sbjct: 426 IRDGYSAELDELRSLATNSQEWLHRLEEEAKQATGIRLKTGYNKVFGYYFEVSQGQVGLV 485
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P + + + RY +PE+ ++ A E++ + + + + E Q
Sbjct: 486 PDYFIRKQTLTNAERYITPELKEFEIKMLNAKEQIQKLEYSLYQDLRLIAKAHIKEIQET 545
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDT 785
+ +A LD + +L ++ +V P V + I I GRHPV++T+L F+PND
Sbjct: 546 ARGIAQLDVILSLGEVAFTNKYVCPTIVTNG---AISIKDGRHPVIETLLKQELFIPNDV 602
Query: 786 NL-HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
L H+E E+ +ITGPNM GKS Y+RQVAL+ IMAQ+GSF+PA A + +D I+TR+GA
Sbjct: 603 VLNHSEEEFI-LITGPNMAGKSTYMRQVALLMIMAQIGSFIPAREATIAPVDRIFTRVGA 661
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
SD I G+STF+ E+ E SYIL + T SLVI+DE+GRGTST DG++IA A ++++ E
Sbjct: 662 SDDISTGQSTFMVEMKEVSYILEHATCNSLVILDEIGRGTSTFDGLSIARAVVEHICETI 721
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
C LF THY ++ +++ +++ + Y V+ DV +L ++V G +
Sbjct: 722 HCKSLFATHYHELIELEDQYS-KLKNYTVAV-----------KDKGNDVLFLRRIVKGGA 769
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ S+G VA+LA LP + + RA I + LE
Sbjct: 770 DRSYGIHVAKLAGLPKAVLDRANAILSHLE 799
>gi|256838304|ref|ZP_05543814.1| DNA mismatch repair protein MutS [Parabacteroides sp. D13]
gi|256739223|gb|EEU52547.1| DNA mismatch repair protein MutS [Parabacteroides sp. D13]
Length = 869
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 256/925 (27%), Positives = 430/925 (46%), Gaps = 146/925 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH-----LDHNFMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA + A++LGI + + A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVIGAEILGIVQTKRANGVGQHVEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + V G F ++ISTG+ + E +
Sbjct: 120 ILNHK-----ENNFLASI--------HFAKEVCGISF--------LDISTGEFMTAEGSI 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP R D +I
Sbjct: 159 DYI----DKLLNNFSPKEVLIERGNKKRFEEAF----GP----RFFIFELDDWIF----- 201
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
T S ED+ + E N + G+ ++ L + A + +L Q
Sbjct: 202 ------------TTSAAEDRLLKHFETKNLKGF--GVQHL-KLGIIASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I + A R + + L T++ LE++ + E +LL +++ T++ GSR+L
Sbjct: 247 THISHITALSR-IEEDRYVRLDKFTVRSLELV--GTMNDEGTSLLDVIDKTISPMGSRML 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
RRW+ PL D I R + V D EP+ +L +
Sbjct: 304 RRWILFPLKDVKPIQERQEVV------------------------DYFFREPETKELLDT 339
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
L +G D++R I+++ +P E + + A+ + GE + L
Sbjct: 340 QLEQIG---DLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACMASGEPSLCRIGEQL 396
Query: 565 HS-ALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
++ AL++ I + P+++ K + VN+E D R
Sbjct: 397 NACALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDD--------------------LR 436
Query: 621 KAVQSAKEELDSLINMCRKQL---GMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNS 675
S K D L+ + ++++ G+ +L+ F +V G + KVP NW + +
Sbjct: 437 AIAYSGK---DYLLKVQQREIELTGIPSLKIAFNNVFGYYIEVRNTHKDKVPANWIRKQT 493
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY + E+ +++ A E++ + ++ + Y Q + +DC
Sbjct: 494 LVNAERYITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRIDC 553
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L + A + ++RPV D +I I GRHPV++ L + ++ ND L E++
Sbjct: 554 LLSFAKAAEANKYIRPVVSDSD---KIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQ 610
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS +RQ ALI +MAQ+G FVPA SA + ++D I+TR+GASD+I G S
Sbjct: 611 IIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGES 670
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFV 911
TF+ E+NEAS IL N T++SLV+ DELGRGTST+DG++IA+A ++Y+ EH K LF
Sbjct: 671 TFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFA 730
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ F + Y+VS K +G V +L K++PG SE SFG
Sbjct: 731 THYHELNEMERAFK-RIKNYNVSV----KEVG-------NKVIFLRKLIPGGSEHSFGIH 778
Query: 972 VAQLAQLPPSCISRATVIAAKLEAE 996
VA++A +P S + R+ I +LE+E
Sbjct: 779 VAKMAGMPKSIVKRSNEILKQLESE 803
>gi|429740457|ref|ZP_19274142.1| DNA mismatch repair protein MutS [Porphyromonas catoniae F0037]
gi|429160893|gb|EKY03337.1| DNA mismatch repair protein MutS [Porphyromonas catoniae F0037]
Length = 883
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 268/931 (28%), Positives = 427/931 (45%), Gaps = 161/931 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---------AHLDHNF 140
TPL +Q +E+K K+PD +L+ VG + F EDA A+++LGI AH++
Sbjct: 8 TPLMKQYLEIKAKHPDAVLLFRVGDFYETFSEDAITASEILGITLTKRANGSAAHVE--- 64
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATL 199
A P L+ ++ +LV AG +V + Q E P + RG++ L T
Sbjct: 65 -LAGFPHHALDTYLPKLVRAGKRVAICDQLED-------PKQTKKLVKRGITELVTPGV- 115
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
V G E+NYL V D G I ++ISTG+ +
Sbjct: 116 -----VLGDNVLKNKENNYLAAVYLTDNGQGSIS---------------LLDISTGEFLV 155
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
E + L+ +L S P E+L+ + ++ T AY G V
Sbjct: 156 SEGTN----EHLDKLLSSYLPKEVLVERK-TRGTFDRTFAYRGFVFEV------------ 198
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE---GIMNMPDLAVQALALTI 376
ED V N+R ++ G+ ++ L ++ L+I
Sbjct: 199 ----------------------EDWTFAVE---NNRQKLQNQLGVKSLKGLGLENKKLSI 233
Query: 377 RH----LKQFGLERIMCLG--ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG-TLL 429
L L LG + RS+ M L + T + LE+L+ S E G +LL
Sbjct: 234 ASAGAILNYLELTSHNELGHITTLRSIDRLGTMRLDSFTFRSLEILQPMS--YEGGKSLL 291
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ T+T G RLLR W++ PL + I R V+ + RT +G+H
Sbjct: 292 DVLDATVTPMGGRLLRHWLSFPLIELPEIHRRQQVVAALVRDAELRRT---LGEHMMGIG 348
Query: 490 DVTIVEPQFYYILSSVLTSLGR-SPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
D+ + + +LGR SP R I TA + ++ + G++L +
Sbjct: 349 DLERMASK---------VALGRISPRETRVIAHSLRSTAQITSLLSKAE-----GEELHR 394
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ E E++ + L P +G+ A + S VN+E +L NL
Sbjct: 395 MAERFETNEEIILDIEQT-------LIDEPPIALGRGAVIASGVNEEL---DELRNLS-- 442
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM-RNLEFMSVSGITHLIELPANFKVP 667
S+G K+ L L + ++ G+ + F +V G + VP
Sbjct: 443 SHG---------------KDYLVHLQDRESRKAGIPLKIAFNNVFGYYVEVRSQHTKSVP 487
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
W + + RY PE+ +++ A E + + + + + Q
Sbjct: 488 ETWTRKQTLVGAERYIFPELKEYEEKILGAEERIAAIEARLYSELIARLSRHIQLLQRNA 547
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDT 785
+ LA LDCL + A+ + +V PV VD E + I GRHPV++ L +++VPND
Sbjct: 548 RTLAELDCLISFASCAEANRYVCPV-VD--EGTVLDIKQGRHPVIEKQLPFGESYVPNDV 604
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
+L + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA +A + ++DGI+TR+GAS
Sbjct: 605 HLDQKETQIMVITGPNMSGKSALLRQTALITLLAQIGSFVPAEAAHIGLVDGIFTRVGAS 664
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE--H 903
D+I +G STF+ E+ EA+ IL N + +SL++ DELGRGTST+DG++IA+A ++YL + H
Sbjct: 665 DNISRGESTFMVEMQEAASILNNLSDRSLILFDELGRGTSTYDGISIAWAIIEYLHDNRH 724
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
+ LF THY ++ D++ + V ++VS + ++ G M +L K++PG
Sbjct: 725 GRPKTLFATHYHELNDLENRLE-RVKNFNVS---AREIEGKM--------LFLRKLIPGG 772
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
SE SFG +VA+L +P S RAT I +LE
Sbjct: 773 SEHSFGIQVARLGGMPQSITQRATEILVQLE 803
>gi|373106358|ref|ZP_09520661.1| DNA mismatch repair protein MutS [Stomatobaculum longum]
gi|371652733|gb|EHO18141.1| DNA mismatch repair protein MutS [Stomatobaculum longum]
Length = 867
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 262/952 (27%), Positives = 431/952 (45%), Gaps = 175/952 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ +E K YPD LL +G + F EDA +A+K L G L+
Sbjct: 4 SPMMTHYLETKKAYPDCLLFYRLGDFYEMFFEDARLASKELELTLTGKECGLEERAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + ++ RLV G+KV V +Q E + G R + + T T+ AA
Sbjct: 64 VPFHAADSYINRLVKRGYKVAVAEQMEDPKLAK------GLVKREVIRVVTPGTVTAA-- 115
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
G E+ ++NYL V++D+G R G+ +ISTG E D
Sbjct: 116 -GALEEE---KNNYLAAVLEDNG----------------RYGLAFADISTGSFFVTE-AD 154
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSK----QTEKMLLAYAGPASNVRVECASRDCFIGG 320
G R L +L PAELL + LS + E+ L P S F+
Sbjct: 155 G--RKELGDILAEFHPAELLKRKNLSLDGCLRHEEALAISELPDS----------AFLRD 202
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A++ + + + L G+ + P L + A +R+L
Sbjct: 203 NAVSLLTEHFRAATTEAL---------------------GLSDYP-LGMLAAGAALRYL- 239
Query: 381 QFGLERIMC-LGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ ++ C L ++ G+ + + A + + LE+ + +++G+LL +++ T T
Sbjct: 240 -YDTQKSRCELITELKAYRGNAYLFIDAASRRNLELTETLRDKNKHGSLLWVLDRTKTAM 298
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G+R LR + PL I R DA+ E + Y E + ++ + P +
Sbjct: 299 GARFLRNLLEKPLLGIPEIEVRQDAIQEF---LSRYIDREELREY---------LAPIY- 345
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
D++R + RI +A + +A +I
Sbjct: 346 --------------DMERLMGRITLGSANARDMLAFGSSI-------------------- 371
Query: 560 TSKTLHSAL--LKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM----------- 606
+AL +K L+ + S+P LL + ++ D DL L+
Sbjct: 372 ------AALPPIKDLLQSFSAP--------LLRSFSQSLDDLRDLSALLARAIADDPPLT 417
Query: 607 -----IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIE 659
II +G +V R R+A K+ L L R + G++NL ++ V G +
Sbjct: 418 LREGHIIKDGYHEDVDRYRRASTEGKQWLAELEERERNKTGIKNLRIKYNKVFGYYFEVT 477
Query: 660 LPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
A +VP + + + RY + E+ + + A E+L + + ++
Sbjct: 478 KSALSQVPDYFQRRQTLANAERYTTEELGKLEESILGAEEKLLTLEFDLFQEVRQKLSAE 537
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD- 778
A Q + +A LD L +LA ++ +VRP D + I GRHPV++ ++
Sbjct: 538 VARIQTSAGIIAYLDALLSLADVAERYQYVRPKLTADG---PLRIVGGRHPVVERMMESG 594
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
FV NDT L +E +ITGPNM GKS Y+RQ ALI ++AQ GSFVPA+ AE+ + D I
Sbjct: 595 RFVENDTLLDSEENRIAVITGPNMAGKSTYMRQTALIALLAQTGSFVPATEAEIGISDRI 654
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TR+GASD + G+STF+ E+ E + ILRN T +SL+I+DE+GRGTST DG++IA+A ++
Sbjct: 655 FTRVGASDDLASGQSTFMVEMTEVANILRNATKRSLIILDEIGRGTSTFDGLSIAWAVVE 714
Query: 899 YLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
YL + LF THY ++ T+ GS+ H +Y + K G + +L
Sbjct: 715 YLATGRLAGAKTLFATHYHEL----TELEGSIPGVH-NYCIAVKEQG-------DTIAFL 762
Query: 957 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE-AEVSSRVQNRSAK 1007
K+V G ++ S+G +VA+LA +P + +RA IAA+L A++++R + +A+
Sbjct: 763 RKIVKGGADQSYGIQVAKLAGVPETVTARAREIAAELSGADIAARAKELAAR 814
>gi|150009585|ref|YP_001304328.1| DNA mismatch repair protein MutS [Parabacteroides distasonis ATCC
8503]
gi|189083164|sp|A6LG92.1|MUTS_PARD8 RecName: Full=DNA mismatch repair protein MutS
gi|149938009|gb|ABR44706.1| putative DNA mismatch repair protein MutS [Parabacteroides
distasonis ATCC 8503]
Length = 870
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 256/925 (27%), Positives = 430/925 (46%), Gaps = 146/925 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH-----LDHNFMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA + A++LGI + + A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVIGAEILGIVQTKRANGVGQHVEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + V G F ++ISTG+ + E +
Sbjct: 120 ILNHK-----ENNFLASI--------HFAKEVCGISF--------LDISTGEFMTAEGSI 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP R D +I
Sbjct: 159 DYI----DKLLNNFSPKEVLIERGNKKRFEEAF----GP----RFFIFELDDWIF----- 201
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
T S ED+ + E N + G+ ++ L + A + +L Q
Sbjct: 202 ------------TTSAAEDRLLKHFETKNLKGF--GVQHLK-LGIIASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I + A R + + L T++ LE++ + E +LL +++ T++ GSR+L
Sbjct: 247 THISHITALSR-IEEDRYVRLDKFTVRSLELV--GTMNDEGTSLLDVIDKTISPMGSRML 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
RRW+ PL D I R + V D EP+ +L +
Sbjct: 304 RRWILFPLKDVKPIQERQEVV------------------------DYFFREPETKELLDT 339
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
L +G D++R I+++ +P E + + A+ + GE + L
Sbjct: 340 QLEQIG---DLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACMASGEPSLCRIGEQL 396
Query: 565 HS-ALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
++ AL++ I + P+++ K + VN+E D R
Sbjct: 397 NACALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDD--------------------LR 436
Query: 621 KAVQSAKEELDSLINMCRKQL---GMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNS 675
S K D L+ + ++++ G+ +L+ F +V G + KVP NW + +
Sbjct: 437 AIAYSGK---DYLLKVQQREIELTGIPSLKIAFNNVFGYYIEVRNTHKDKVPANWIRKQT 493
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY + E+ +++ A E++ + ++ + Y Q + +DC
Sbjct: 494 LVNAERYITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRIDC 553
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L + A + ++RPV D +I I GRHPV++ L + ++ ND L E++
Sbjct: 554 LLSFAKAAEANKYIRPVVSDSD---KIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQ 610
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS +RQ ALI +MAQ+G FVPA SA + ++D I+TR+GASD+I G S
Sbjct: 611 IIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGES 670
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFV 911
TF+ E+NEAS IL N T++SLV+ DELGRGTST+DG++IA+A ++Y+ EH K LF
Sbjct: 671 TFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFA 730
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ F + Y+VS K +G V +L K++PG SE SFG
Sbjct: 731 THYHELNEMERAFK-RIKNYNVSV----KEVG-------NKVIFLRKLIPGGSEHSFGIH 778
Query: 972 VAQLAQLPPSCISRATVIAAKLEAE 996
VA++A +P S + R+ I +LE+E
Sbjct: 779 VAKMAGMPKSIVKRSNEILKQLESE 803
>gi|386819862|ref|ZP_10107078.1| DNA mismatch repair protein MutS [Joostella marina DSM 19592]
gi|386424968|gb|EIJ38798.1| DNA mismatch repair protein MutS [Joostella marina DSM 19592]
Length = 855
Score = 280 bits (715), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 264/951 (27%), Positives = 442/951 (46%), Gaps = 166/951 (17%)
Query: 99 LKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASIPTFRLNVHV 154
+K KYPD LL+ VG + FGEDA + AK+LGI +N A P LN ++
Sbjct: 7 IKAKYPDALLLFRVGDFYETFGEDAVVTAKILGIVLTHRNNGGDRTELAGFPHHSLNTYL 66
Query: 155 RRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDVGGGEDGCG 213
+LV AG +V + Q E P + RG++ L T V +D
Sbjct: 67 PKLVKAGKRVAICDQLE-------DPKQTKTIVKRGVTELVTPG-------VALNDDILN 112
Query: 214 GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEA 273
+SN + + FG LG+ +++STG+ + E ++ ++
Sbjct: 113 AKSNNFLSAI------------YFGKKM---LGIAFLDVSTGEFLTAEGDEEYIAK---- 153
Query: 274 VLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENM 333
+L + SP+E+L+ SK+ + L+ G + E E+
Sbjct: 154 LLQNFSPSEVLI----SKKHKTEFLSSFGKEFHT--------------FFMEDWIFQEDY 195
Query: 334 GEDTLSNNEDQNMDVPEQG----NHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMC 389
++TL NN Q + G H S G+ A+ L+ T +H K L+ I
Sbjct: 196 TQETL-NNHFQTKSLKGFGIDHLQHGSIAAGV------ALHYLSET-QHNK---LQHITT 244
Query: 390 LGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVT 449
+ ++ + + T++ LE+ + + S TLL +++ T++ G RLL+RW+
Sbjct: 245 IS----RIAEEEYVWMDRFTIRNLELYQAPTANS--VTLLDVIDKTISPMGGRLLKRWLA 298
Query: 450 HPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSL 509
PL + I R V ++E+ DE I++ T +
Sbjct: 299 LPLKSIDKIRQRHQIVQYLSEN-------------DE--------------IINGFKTQI 331
Query: 510 GRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHIDGEYREKVTSKTLHS 566
+ D++R I+++ P E + + + AI+ K+ + + D KV L++
Sbjct: 332 KQISDLERLISKVATGKINPREVVLLKNSLNAIVPIKKEAAKSNNDAL---KVIGDRLNA 388
Query: 567 ALLKRLILTASSPAVIGKAAKLLSTVNKEA---ADQGDLLNLMIISNGQFSEVARARKAV 623
+ R ++ T+++EA ++GD I+ G E+ RK
Sbjct: 389 CDVLR--------------ERIEQTLHEEAPVNINKGD-----AIATGFSEELDELRKLA 429
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIR 681
S K+ LDS++ K+ G+ +L+ S + + IE+ K VP W + + R
Sbjct: 430 FSGKDYLDSMLEREMKRTGISSLKIASNNVFGYYIEVRNTHKDKVPEEWIRKQTLVNAER 489
Query: 682 YHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALAT 741
Y + E+ ++ A E++ I+ + + + Y Q +A LDCL
Sbjct: 490 YITEELKEYEAKILGAEEKIAILEQQIFTQLVTWMHSYIQSVQTNAILIAQLDCLCGFVQ 549
Query: 742 LSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQIITG 799
L++ N+V P D ++ + I GRHPV++ L + ++ N+ L+ + + +ITG
Sbjct: 550 LAKENNYVLPEMDDSYD---LEIEEGRHPVIEKQLPLGEAYITNNVILNRDEQQIIMITG 606
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS +RQ ALI ++AQ+GSFVPA A + ++D I+TR+GASD+I G STF+ E+
Sbjct: 607 PNMSGKSAILRQTALIVLLAQMGSFVPAEKARIGIVDKIFTRVGASDNISLGESTFMVEM 666
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVTHYPKIA 918
NE + IL N + +SL+++DE+GRGTST+DG++IA+A +Y+ EH K LF THY ++
Sbjct: 667 NETASILNNLSERSLILLDEIGRGTSTYDGISIAWAIAEYIHEHPGKAKTLFATHYHELN 726
Query: 919 DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQ 977
++ F+ + Y+VS K +D V +L K++PG SE SFG VA++A
Sbjct: 727 EMTETFS-RIKNYNVSV------------KELKDTVLFLRKLIPGGSEHSFGIHVAKMAG 773
Query: 978 LPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVS 1028
+P I RA I KLE SS +L+D + +Q M +S
Sbjct: 774 MPQQVIHRANKILKKLEKSHSSE------------ELTDNLKASQNEMQLS 812
>gi|15895112|ref|NP_348461.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum ATCC
824]
gi|44888237|sp|Q97I19.1|MUTS_CLOAB RecName: Full=DNA mismatch repair protein MutS
gi|15024812|gb|AAK79801.1|AE007692_9 Mismatch repair protein MutS, ATPase [Clostridium acetobutylicum ATCC
824]
Length = 869
Score = 280 bits (715), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 273/1020 (26%), Positives = 461/1020 (45%), Gaps = 187/1020 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ QQ + +K + D +L VG + F EDAE+A++ L G L+
Sbjct: 4 SPMMQQYLSIKENHKDCILFFRVGDFYEMFFEDAEVASRELELVLTGKDCGLEKRAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +LV+ G+KV V +Q E ++ A G K YT ++ ED
Sbjct: 64 VPHHAYAIYASKLVSKGYKVAVAEQLEDPSL-AKGIVKRDVIKVLTPGTYTDSSF--LED 120
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
++NY++ + D K+ F D ISTG EFN
Sbjct: 121 T---------KNNYIMSLFIHD----KVSAMCFAD------------ISTG-----EFNL 150
Query: 265 GFLRSGLEAVLLSLS---PAELLLGQPLS-----KQTEKMLLAYAGPASNVRVECASRDC 316
E +L +S P EL+L + L K E+ + Y ++ E + +
Sbjct: 151 TETELDFEIILNEISKFSPKELVLQENLDDKLVDKIRERFDVVYNRFSNEYFKEHRNENL 210
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT- 375
AEV NM E +S G++ + Q ALT
Sbjct: 211 KAQFSNYAEV-----NMTEGL-----------------KSCANGLIKYI-IDTQKTALTH 247
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
I L+++ + F +++ N+ + LE+ + S+ G+LL +++ T
Sbjct: 248 IDELQKYEI-------VDF--------LSIDINSRRNLELTETLKDKSKKGSLLWVLDKT 292
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G R +R+W+ PL D I+ RLDAV E+ ++ SY N D+ +
Sbjct: 293 STAMGGRQIRKWIERPLIDDEKINLRLDAVEEMLTNV-SY------------NEDLKELL 339
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDG 553
Q Y DI+R +I ++ E I++ +I L A K+L
Sbjct: 340 KQVY--------------DIERLAGKISSKSVNAKEMISLRGSIEKLPAIKKL------- 378
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL-STVNKE---AADQGDLLNLMIIS 609
K +S LL + ++ +G KLL ++N + +G+ II
Sbjct: 379 -------IKNFNSELLVNM---ENALDDLGDIYKLLYESINDNPSLSIKEGN-----IIK 423
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLN 669
G ++ R A K+ + SL N R+ G+++L+ + IE+ K LN
Sbjct: 424 EGYNKDIDELRLAKSHGKQWIASLENTEREVTGIKSLKVSYNKVFGYYIEIT---KSNLN 480
Query: 670 ------WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ + + + RY +PE+ +++ A E+L ++ + +
Sbjct: 481 LVPEGRYIRKQTLTNSERYITPELKEMEEKILGAEEKLVLLEYNVFCEIRERIEKEIDRI 540
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVP 782
+ + + L+ LDC+ + A ++R N+ +PV D V I GRHPV++ ++ NFV
Sbjct: 541 KGSAKILSELDCICSFADVARENNYCKPVIKRDGTLV---IKEGRHPVVEKVIASGNFVA 597
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
NDT ++ +ITGPNM GKS Y+RQV LI +MAQ+G FVPAS+AE+ + D I+TR+
Sbjct: 598 NDTVINNSDNVMMLITGPNMAGKSTYMRQVGLIVLMAQIGCFVPASAAEISICDKIFTRI 657
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL- 901
GASD + G+STF+ E+ E S+IL+N T SL+++DE+GRGTST+DG++IA++ ++Y+
Sbjct: 658 GASDDLNAGKSTFMVEMWEVSHILKNATKNSLILLDEVGRGTSTYDGLSIAWSVIEYICK 717
Query: 902 -EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E+ KC LF THY ++ ++ + G + Y ++ K + D+ +L K++
Sbjct: 718 SENLKCKTLFATHYHELTKLEGEIEG-LKNYSIAV-----------KKVNDDIIFLRKII 765
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQE 1020
++ S+G +VA++A LP + RA I LE +N K+ +VK ++
Sbjct: 766 SKGADESYGIEVAKIAGLPEEVLVRAREILKDLEEAKPKTAENTEDKKTNIVKEEPKKDS 825
Query: 1021 AQENMPVSPESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPA----KSFQFLKHARSI 1076
Q + YL R E ++ +D D NP K ++F+K A+ +
Sbjct: 826 YQIDFN------YLER----ESILKELKDT------EIMDMNPIECMNKLYEFIKRAKKL 869
>gi|335049302|ref|ZP_08542301.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 199-6]
gi|333763439|gb|EGL40888.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 199-6]
Length = 754
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 198/623 (31%), Positives = 311/623 (49%), Gaps = 67/623 (10%)
Query: 393 SFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPL 452
+ L + L A L LE+ RN +G GTLL +++HT T G RLLR+W+ PL
Sbjct: 146 TLEPLQQEQRLVLDAACLHHLEITRNVRDGGRKGTLLAVLDHTCTAMGGRLLRKWLETPL 205
Query: 453 CDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRS 512
I R + V+E+ QH DVT + + Y
Sbjct: 206 LSGTQIMRRQEGVAELV-------------QHSVLRKDVTDILEKIY------------- 239
Query: 513 PDIQRGITRIFHRTATPSEFIAVMQA--ILYAGKQ-LQQLHIDGEYREKVTSKTLHSALL 569
D +R +TRI T +P +++A+ ++ +L KQ LQQ+ S +L
Sbjct: 240 -DFERILTRIETGTVSPKDYVALRESLGVLPTLKQALQQVT---------------SPIL 283
Query: 570 KRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEE 629
+ LI + + LL KE Q + N +I G SE+ R+ ++KE
Sbjct: 284 RDLIAAVHTH---DEVYDLLCRSIKEVPGQV-IRNGGVIREGFSSELDEIRRIGANSKEF 339
Query: 630 LDSLINMCRKQLGMR-NLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVL 688
L L R++ G++ + + V G I VP + + + RY +P +
Sbjct: 340 LQELEAKERERTGIKMKIGYTKVFGYYFEISHANTKPVPEYYIRKQTLVNAERYITPALK 399
Query: 689 TALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF 748
++ A E + + A + + + + Q +ALA LDCLH+LA ++ +
Sbjct: 400 EFEVKVLTAQERMLALEYALYGEVRQRIQTHIHDMQETARALAQLDCLHSLAVAAQENRY 459
Query: 749 VRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSC 807
+RP + QI I GRHP+++ + + FVPND L+ + IITGPNM GKS
Sbjct: 460 IRPQLNGER---QIRIVDGRHPIMEHYVKNALFVPNDVVLNHDTHEILIITGPNMAGKST 516
Query: 808 YIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILR 867
Y+RQVA++ +M Q+GSF+PA A + +D I+TR+GA+D I G+STF+ E+ E S+IL+
Sbjct: 517 YMRQVAVLVLMTQIGSFIPAREASICPVDRIFTRIGATDDILTGQSTFMMEMEEVSHILQ 576
Query: 868 NCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGS 927
T SL+I+DE+GRGTST DG++IA A ++Y L+ + LF THY ++ D+ T +
Sbjct: 577 YATQNSLLILDEIGRGTSTFDGMSIARAVIEYCLKKVHALTLFATHYHELTDMST-MSKK 635
Query: 928 VGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
+ Y V+ + +D+T+L +++PG ++ S+G VA+LA LP + RA
Sbjct: 636 IKNYTVAV-----------KERGRDITFLRRIIPGGADRSYGLHVARLAGLPEGLLKRAE 684
Query: 988 VIAAKLEAEVSSRVQ-NRSAKRD 1009
VI +LE Q + S KRD
Sbjct: 685 VILQELETAEHRPCQVSPSEKRD 707
>gi|374599826|ref|ZP_09672828.1| DNA mismatch repair protein MutS [Myroides odoratus DSM 2801]
gi|423324987|ref|ZP_17302828.1| DNA mismatch repair protein mutS [Myroides odoratimimus CIP 103059]
gi|373911296|gb|EHQ43145.1| DNA mismatch repair protein MutS [Myroides odoratus DSM 2801]
gi|404606996|gb|EKB06530.1| DNA mismatch repair protein mutS [Myroides odoratimimus CIP 103059]
Length = 866
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 255/950 (26%), Positives = 433/950 (45%), Gaps = 163/950 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K TPL +Q E+K KYPD L+ VG + FGEDA A++LGI A
Sbjct: 9 KETPLMKQYNEIKAKYPDACLLFRVGDFYETFGEDAIRTAQILGITLTKRGAGSSSETEL 68
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A P +NV++ +LV AG +V + Q E + RG++ L T
Sbjct: 69 AGFPHHSINVYLPKLVKAGLRVAICDQLEDPKMTK------TIVKRGVTELVTPG----- 117
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
V ++ +SN +C + LG+ +++STG+ E
Sbjct: 118 --VALNDEVLQSKSNNFLCAIHFTKKA---------------LGIAFLDVSTGEFFTSEG 160
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+ ++ + +L + +P+E+L+ K + G A N+ F+
Sbjct: 161 DVEYM----DKLLQNFNPSEILV----QKSNKVTFQQEFGSAYNL--------FFLDDWV 204
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
E + +E++ + Q N GI ++ D + A + +L +
Sbjct: 205 FKEDFA-FESLTKHF-------------QTNSLKGF-GIEDLTD-GIIACGAVLHYLSET 248
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
RI + ++ + ++ + + T++ LE L +SN + TLL +++ TL+ G R
Sbjct: 249 QHTRIKHI-SNIQRIAEDAYVWMDRFTIRNLE-LYQSSNFNAI-TLLDVIDKTLSPMGGR 305
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LL+RW+ PL + I R EI E + +K + + Q
Sbjct: 306 LLKRWLALPLKKKKSIVER----HEIVELLT------------QKQDTLAFFQGQ----- 344
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQL------------Q 547
+ + D++R ++I +P E + + + AI+ +Q
Sbjct: 345 ------IKKISDLERLTSKIATGKVSPRELLFLKESLDAIIPLKEQALKSKNDSLKIIGD 398
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
QLH G RE++ ++T+H +P I K + +N+E
Sbjct: 399 QLHDCGLLRERI-AQTIH----------PDAPVAISKGNAIAFGINEE------------ 435
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFK 665
+ R + K LD + + G+ +L+ F +V G + K
Sbjct: 436 --------LDELRNISSTGKSYLDEMEQRESQNTGIPSLKIAFNNVFGYYIEVRNTHKDK 487
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP W + + RY + E+ +++ A E+++ + +D F++ G Y Q
Sbjct: 488 VPAEWIRKQTLVNAERYITEELKAYENKILGAEEKISQLEGQIYDEFVQWCGQYIQPVQL 547
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDN-FVPN 783
+A LDCL + A L+ N++RPV D ++ + I GRHPV++ L D ++ N
Sbjct: 548 NAHLVAQLDCLSSFAQLALENNYIRPVLDDSYD---LEIKDGRHPVIEKQLPFDKPYITN 604
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D L+ + +ITGPNM GKS +RQ ALI ++AQ+G FVPA++ + V+D I+TR+G
Sbjct: 605 DVFLNNSTQQIIMITGPNMSGKSAILRQTALIVLLAQMGCFVPAAAVRMGVVDKIFTRVG 664
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASD+I G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A ++L +H
Sbjct: 665 ASDNISMGESTFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAIAEFLHQH 724
Query: 904 -KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
K LF THY ++ D++ F G V Y+VS + +V ++ K++PG
Sbjct: 725 PSKPKTLFATHYHELNDMQEHFEG-VKNYNVSI-----------KELKDNVLFIRKLIPG 772
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEA--EVSSRVQNRSAKRDL 1010
S SFG VA++A +P ++RA + +LE VQ + A++DL
Sbjct: 773 GSAHSFGIHVAKMAGMPQIVVNRAQKMLKQLEKTHHKDGDVQLKPAEQDL 822
>gi|332654851|ref|ZP_08420593.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
gi|332516194|gb|EGJ45802.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
Length = 866
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 264/944 (27%), Positives = 435/944 (46%), Gaps = 176/944 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAHLDHN------FMT 142
TP+ +Q +E+K + PD +L +G + F +DA++ +K L + D N
Sbjct: 5 TPMMKQYLEMKDRNPDSILFFRLGDFYEMFFDDAKLVSKELDLTLTTRDRNKPPEERTPM 64
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+P ++ RL+ G+KV + +QTE A G R + + + T+ +A
Sbjct: 65 CGVPYHSCESYIARLIAKGYKVAICEQTEDPATAK------GLVDRDIIRIISPGTVISA 118
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ G++ N+L V D+ VG + +ISTG+V F
Sbjct: 119 SMLEEGKN------NFLSAVYADESGVG----------------LCLCDISTGEVFATSF 156
Query: 263 NDG-FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
G + LE L P E +L Q G
Sbjct: 157 PAGPEAQDHLENELGRFHPTEAVLSQ-------------------------------GAW 185
Query: 322 ALAEVMSLYENMGEDTLSNNEDQN--MDVPEQGNHRSAIEGIMNMP---DLAVQALALTI 376
LA + ++ + + E++ +D + ++ G+ +P AVQA +
Sbjct: 186 TLAGLTDFLKDRLDCMCQHWEEEGFALDHAREMVNKQFTAGLETLPAGDTAAVQATGGLL 245
Query: 377 RHLKQFGLERIMCLGA-SFRSLSGSMEMTLSA-NTLQQLEVLRNNSNGSEYGTLLHIMNH 434
R+L + + A S+ + ME+ L+A TL+ E LR + G+LL +M+
Sbjct: 246 RYLYDTQKTDLGHIAAFSYYTTGQFMELDLTARQTLELTETLRGKE---KKGSLLWVMDK 302
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T G RL+R W+ PL I+ R AV ++ E + T E + + +D+ +
Sbjct: 303 TRTPMGHRLIRGWMERPLLSPVQIARRQQAVGDLVEDI---ITREELTLTLREVTDLERL 359
Query: 495 EPQFYY------ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
+ Y L+++ T LG+ P I+ ++ P A++Q++ +QL
Sbjct: 360 IGRVVYGTAGGRDLTALATGLGKLPRIRELLS--------PCSS-ALLQSL---AEQLDD 407
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
L E RE LL+R ++ P + K I
Sbjct: 408 LP---ELRE----------LLQRALV--DEPPFSVREGKF-------------------I 433
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--V 666
G EV R R + + L L ++Q G++N++ + IE+ + V
Sbjct: 434 REGYSEEVDRLRNVMDHGADMLADLEARTKEQTGIKNMKVGYNKVFGYYIEVAKSQTNLV 493
Query: 667 PLNWAKVNSTKKTIRYHSPE-------VLTALDQLALANEEL-----TIVCRAAWDSFLK 714
P W + +T + RY S E +L+A D++ +L VCR
Sbjct: 494 PEGWVRKQTTVNSERYISQELKDLEHTILSAQDKVVALEYQLFCELKDTVCR-------- 545
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
+ + Q + +A +D L++ AT++ N+ P D+ V ++I GRHPV++
Sbjct: 546 ----HVTQVQKSAATVAQVDVLNSFATVAAAGNYCMPQV--DNSSV-LNIVEGRHPVVEK 598
Query: 775 ILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
+L D+ FVPNDT++ + C IITGPNM GKS Y+RQVALI +MAQ+GSFVPA SA +
Sbjct: 599 MLKDSLFVPNDTHMDDGDDLCAIITGPNMAGKSTYMRQVALITLMAQMGSFVPAKSAHIG 658
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
V+D ++TR+GASD + G+STF+ E+ E + +L+N T +SL+I+DE+GRGTST+DG+AIA
Sbjct: 659 VVDRVFTRIGASDDLSAGQSTFMVEMTEVAQLLKNATRRSLLILDEIGRGTSTYDGMAIA 718
Query: 894 YATLDYLLEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
+ L+Y + ++ C LF THY ++ ++ + G V Y+++ + DQ
Sbjct: 719 RSVLEYCADKRRLGCKTLFATHYHELTVLEGEIPG-VKNYNIA----------AKKRKDQ 767
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
V +L K+V G ++ S+G +VAQLA +P I RA I +LEA
Sbjct: 768 -VIFLRKIVRGGADQSYGIEVAQLAGVPDRVIKRAREILKELEA 810
>gi|153206840|ref|ZP_01945681.1| DNA mismatch repair protein MutS [Coxiella burnetii 'MSU Goat Q177']
gi|165918512|ref|ZP_02218598.1| DNA mismatch repair protein MutS [Coxiella burnetii Q321]
gi|120577203|gb|EAX33827.1| DNA mismatch repair protein MutS [Coxiella burnetii 'MSU Goat Q177']
gi|165917758|gb|EDR36362.1| DNA mismatch repair protein MutS [Coxiella burnetii Q321]
Length = 859
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 253/939 (26%), Positives = 421/939 (44%), Gaps = 149/939 (15%)
Query: 81 SQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----- 133
S TT N ++TP+ +Q + +K +YPD+L+ +G + F +DA+ AAK+L I
Sbjct: 7 SPTTQNDFSQHTPMMRQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARG 66
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
H A +P + ++ +LV G V + +Q A GP R ++ +
Sbjct: 67 QSAGHAIPMAGVPYHAVENYLTKLVRLGESVVICEQIGDPATSK------GPVAREVTRI 120
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T T+ + D N L+ + + R G+ ++I+
Sbjct: 121 ITPGTVSDEALLDEHRD------NTLMVIHQEKD----------------RFGIATLDIT 158
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G + E + L A + + PAELL+ + S K A +++
Sbjct: 159 SGRFLIQEI---ISENALFAEIERIRPAELLISEENSVHPLK--------ADSIKRRPPW 207
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA-- 371
F AL + ++ D GI ++P LA+ A
Sbjct: 208 E--FDHATALTLLCQQFQTKSLDGF---------------------GITHLP-LAITAAG 243
Query: 372 -LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L + + ++ L I + A + + ANT + LE++ N G E +L
Sbjct: 244 CLLQYVNYTQKSALPHIHSIQAE----QNEEALFIDANTRRNLELI-TNLQGEEVHSLAW 298
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T GSRLLRRW+ PL D+ L+ R +AVS
Sbjct: 299 LLDHTATPMGSRLLRRWINRPLRDQILLQQRQNAVS------------------------ 334
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQ 547
T++E + Y S + +L D++R + RI R+A P + + + QA+ +QL
Sbjct: 335 -TLLEKRNY---SEIYENLRHIGDLERIVARIALRSARPRDLMQLRQALGVLPTLHQQLT 390
Query: 548 QLHIDGEYREKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L ++ + +E + L L + L + + P VI D G
Sbjct: 391 NLPLNKQLQEIKNNLGLFDELFRLLQKAIIENPPIVI--------------RDGG----- 431
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
+I++G + + R ++ + L L R++ + L+ + + G I
Sbjct: 432 -VIADGYDAPLDELRNMSTNSHQFLIDLEQQERERTKINTLKVGYNRIHGYYIEISRAQA 490
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ P + + + K RY +PE+ D++ + + ++ L
Sbjct: 491 KQAPTEYIRRQTLKNVERYITPELKIFEDKVLSSRSRALAREKELYEQLLDTLIEKLIPL 550
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
Q A+A LD L+ LA + NF P F D P+ I I +GRHP+++ ++ D F+PN
Sbjct: 551 QQCASAIANLDVLNTLAERADTLNFNAPQFCD--YPI-IKIEAGRHPIVENVMTDPFMPN 607
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT+L +R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA +A+L +D I+TR+G
Sbjct: 608 DTHLDEKRRML-IITGPNMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIG 666
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + GRSTF+ E+ E + IL N T +SLV++DE+GRGTST DG+++AYA YL
Sbjct: 667 AADDLASGRSTFMVEMTETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATK 726
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K LF THY ++ + + +V H+ + + ++ + +L+ + G
Sbjct: 727 LKAFALFATHYFELTALASTLP-AVKNVHLDAV-----------EHEEKIIFLHALREGP 774
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+ S+G +VAQLA +P S I A + E V S Q
Sbjct: 775 ANKSYGLQVAQLAGIPRSVIQHARQKLEEFENPVISETQ 813
>gi|215919092|ref|NP_820057.2| DNA mismatch repair protein MutS [Coxiella burnetii RSA 493]
gi|206583977|gb|AAO90571.2| DNA mismatch repair protein [Coxiella burnetii RSA 493]
Length = 871
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 253/939 (26%), Positives = 422/939 (44%), Gaps = 149/939 (15%)
Query: 81 SQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----- 133
S TT N ++TP+ +Q + +K +YPD+L+ +G + F +DA+ AAK+L I
Sbjct: 19 SPTTQNDFSQHTPMMRQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARG 78
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
H A +P + ++ +LV G V + +Q A GP R ++ +
Sbjct: 79 QSAGHAIPMAGVPYHAVENYLTKLVRLGESVVICEQIGDPATSK------GPVAREVTRI 132
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T T+ + D N L+ + + R G+ ++I+
Sbjct: 133 ITPGTVSDEALLDEHRD------NTLMVIHQEKD----------------RFGIATLDIT 170
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G + E + L A + + PAELL+ + S K A +++
Sbjct: 171 SGRFLIQEI---ISENALFAEIERIRPAELLISEENSVHPLK--------ADSIKRRPPW 219
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA-- 371
F AL + ++ D GI ++P LA+ A
Sbjct: 220 E--FDHATALTLLCQQFQTKSLDGF---------------------GITHLP-LAITAAG 255
Query: 372 -LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L + + ++ L I + A + + ANT + LE++ N G E +L
Sbjct: 256 CLLQYVNYTQKSALPHIHSIQAE----QNEEALFIDANTRRNLELI-TNLQGEEVHSLAW 310
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T GSRLLRRW+ PL D+ L+ R +AVS
Sbjct: 311 LLDHTATPMGSRLLRRWINRPLRDQILLQQRQNAVS------------------------ 346
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQ 547
T++E + Y S + +L D++R + RI R+A P + + + QA+ +QL
Sbjct: 347 -TLLEKRNY---SEIYENLRHIGDLERIVARIALRSARPRDLMQLRQALGVLPTLHQQLT 402
Query: 548 QLHIDGEYREKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L ++ + +E + L L + L + + P VI D G
Sbjct: 403 NLPLNKQLQEIKNNLGLFDELFRLLKKAIIENPPIVI--------------RDGG----- 443
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
+I++G + + R ++ + L L R++ + ++ + + G I
Sbjct: 444 -VIADGYDAPLDELRNMSTNSHQFLIDLEQQERERTKINTVKVGYNRIHGYYIEISRAQA 502
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ P + + + K RY +PE+ D++ + + ++ L
Sbjct: 503 KQAPTEYIRRQTLKNVERYITPELKIFEDKVLSSRSRALAREKELYEQLLDTLIEKLIPL 562
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
Q A+A LD L+ LA + NF P F D P+ I I +GRHP+++ ++ D F+PN
Sbjct: 563 QQCASAIANLDVLNTLAERADTLNFNAPQFCD--YPI-IKIEAGRHPIVENVMTDPFMPN 619
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT+L +R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA +A+L +D I+TR+G
Sbjct: 620 DTHLDEKRRML-IITGPNMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIG 678
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + GRSTF+ E+ E + IL N T +SLV++DE+GRGTST DG+++AYA YL
Sbjct: 679 AADDLASGRSTFMVEMTETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATK 738
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K LF THY ++ + + +V H+ + + ++ + +L+ + G
Sbjct: 739 LKAFALFATHYFELTALASTLQ-AVKNVHLDAV-----------EHEEKIIFLHALREGP 786
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+ S+G +VAQLA +P S I A +LE V S Q
Sbjct: 787 ANKSYGLQVAQLAGIPRSVIQHARQKLEELENPVISETQ 825
>gi|374261322|ref|ZP_09619906.1| DNA mismatch repair protein [Legionella drancourtii LLAP12]
gi|363538217|gb|EHL31627.1| DNA mismatch repair protein [Legionella drancourtii LLAP12]
Length = 845
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 258/920 (28%), Positives = 423/920 (45%), Gaps = 161/920 (17%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAH----LDHNFMTA 143
+TP+ QQ + +K++YPD+LL+ +G + F +DA+ AA +L + H D A
Sbjct: 5 HTPMMQQYLRIKSEYPDMLLLYRMGDFYELFFDDAKRAAHLLNLTLTHRGQSADKPIPMA 64
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ RL+ G V + +Q A GP R ++ + T T+
Sbjct: 65 GVPYHAVENYLARLLKKGESVAICEQIGDPATSK------GPVERQVTRIITPGTVTDEA 118
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L+ + +G ++ GD+ G F+
Sbjct: 119 LLDAKKD------NLLLALHQQRQKIG---------------------LAWGDLSSGRFH 151
Query: 264 DGFL--RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L S L A L L PAELLL + AS + C + + G
Sbjct: 152 LLELAETSELSAELTRLQPAELLLQE----------------ASPLEEYCLNFPVKVRPG 195
Query: 322 ALAEVMSLYENMGED-TLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
S + + E T+SN A G + P + A AL + +L+
Sbjct: 196 WEFNFDSAKKRLCEQFTVSN---------------LAAFGEQDYPTALIAAGAL-LSYLQ 239
Query: 381 QFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ + L A +L S + + L A+T + LE+ N G E +LL +++ T
Sbjct: 240 TTQKQALPHLNA--LTLENSHDYLQLDASTQKHLELFENVQGGHE-NSLLSVLDKTACTM 296
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLL+RW+ PL ++LI AR A++EI +G E +
Sbjct: 297 GSRLLKRWLGRPLKQQSLIQARQQAIAEI------------IGLQ---------CEATIH 335
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---------MQAILYAGKQLQQLH 550
+L + D++R ++RI ++A P + +A+ + A L K L
Sbjct: 336 QLLRQIC-------DVERIVSRIALKSARPRDLLALGTTLTVLPEIHAALAQNKCPLALE 388
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN 610
+ + T + L +A + +P V+ + D G +I+
Sbjct: 389 LKAHTQPLPTLQQLLAAAI------IENPPVLIR-------------DGG------VIAP 423
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA--NFKVPL 668
G E+ R A E LD L R++ G+ +L+F + + IEL + K P
Sbjct: 424 GFDEELDELRMLSTRANETLDKLEQDERQRTGLSSLKFGFNNVQGYYIELSKAQSEKAPT 483
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW--DSFLKEFGGYYAEFQAA 726
++ + + K RY +PE L ++ L+ + + + R W D+ L+E AE
Sbjct: 484 HYHRKQTLKNVERYITPE-LKVFEEKVLSAQ-VKALAREKWLYDNLLEEIQQSIAELTQL 541
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
+ALA LD + LA +++ N+ P V + QI I +GRHPV++ +L + F+ ND
Sbjct: 542 ARALAQLDVVVTLAERAQSLNWCCPSLVPES---QISIQAGRHPVIENLLQEQFIANDLQ 598
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L E+ +ITGPNMGGKS Y+RQ ALI ++A +GSFVPA + L +D I+TR+GASD
Sbjct: 599 LQPEQNIL-LITGPNMGGKSTYMRQTALIVLLAHIGSFVPAQAVTLGPIDRIFTRIGASD 657
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
+ GRSTF+ E+ E + ILR T +SLV++DE+GRGTST+DG+A+AYA+ YL K
Sbjct: 658 DLASGRSTFMVEMTETAQILRQATQESLVLIDEIGRGTSTYDGMALAYASCAYLATTIKA 717
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ ++ ++ + + L + +++ +LY+V PG +
Sbjct: 718 YTLFSTHYFELTNLSQQWPCIRNVHLQASLETGRII------------FLYRVEPGYANR 765
Query: 967 SFGFKVAQLAQLPPSCISRA 986
S+G +VA+LA +P + A
Sbjct: 766 SYGLEVAELAGIPADVLQIA 785
>gi|301311772|ref|ZP_07217697.1| DNA mismatch repair protein MutS [Bacteroides sp. 20_3]
gi|423337430|ref|ZP_17315174.1| DNA mismatch repair protein mutS [Parabacteroides distasonis
CL09T03C24]
gi|300830332|gb|EFK60977.1| DNA mismatch repair protein MutS [Bacteroides sp. 20_3]
gi|409237259|gb|EKN30059.1| DNA mismatch repair protein mutS [Parabacteroides distasonis
CL09T03C24]
Length = 870
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 255/926 (27%), Positives = 433/926 (46%), Gaps = 148/926 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH-----LDHNFMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA + A++LGI + + A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVIGAEILGIVQTKRANGVGQHVEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + V G F ++ISTG+ + E +
Sbjct: 120 ILNHK-----ENNFLASI--------HFAKEVCGISF--------LDISTGEFMTAEGSI 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP R D +I
Sbjct: 159 DYI----DKLLNNFSPKEVLIERGNKKRFEEAF----GP----RFFIFELDDWIF----- 201
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
T S ED+ + E N + G+ ++ L + A + +L Q
Sbjct: 202 ------------TTSAAEDRLLKHFETKNLKGF--GVQHLK-LGIIASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I + A R + + L T++ LE++ + E +LL +++ T++ GSR+L
Sbjct: 247 THISHITALSR-IEEDRYVRLDKFTVRSLELV--GTMNDEGTSLLDVIDKTISPMGSRML 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
RRW+ PL D I R + V D EP+ +L +
Sbjct: 304 RRWILFPLKDVKPIQERQEVV------------------------DYFFREPETKELLDT 339
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE--KVTSK 562
L +G D++R I+++ +P E + ++ L A + +++ + E ++ +
Sbjct: 340 QLEQIG---DLERIISKVAVGRVSPREVVQ-LKVALRAIEPIKEACMASEEPSLCRIGEQ 395
Query: 563 TLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
AL++ I + P+++ K + VN+E D
Sbjct: 396 LNVCALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDD--------------------L 435
Query: 620 RKAVQSAKEELDSLINMCRKQL---GMRNLE--FMSVSGITHLIELPANFKVPLNWAKVN 674
R S K D L+ + ++++ G+ +L+ F +V G + KVP NW +
Sbjct: 436 RAIAYSGK---DYLLKVQQREIELTGIPSLKIAFNNVFGYYIEVRNTHKDKVPANWIRKQ 492
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ +++ A E++ + ++ + Y Q + +D
Sbjct: 493 TLVNAERYITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRID 552
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAERE 792
CL + A + ++RPV D +I I GRHPV++ L + ++ ND L E++
Sbjct: 553 CLLSFAKAAEANKYIRPVVSDSD---KIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQ 609
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS +RQ ALI +MAQ+G FVPA SA + ++D I+TR+GASD+I G
Sbjct: 610 QIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGE 669
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLF 910
STF+ E+NEAS IL N T++SLV+ DELGRGTST+DG++IA+A ++Y+ EH K LF
Sbjct: 670 STFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLF 729
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ +++ F + Y+VS K +G V +L K++PG SE SFG
Sbjct: 730 ATHYHELNEMERAFK-RIKNYNVSV----KEVG-------NKVIFLRKLIPGGSEHSFGI 777
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAE 996
VA++A +P S + R+ I +LE+E
Sbjct: 778 HVAKMAGMPKSIVKRSNEILKQLESE 803
>gi|340622702|ref|YP_004741154.1| DNA mismatch repair protein mutS [Capnocytophaga canimorsus Cc5]
gi|339902968|gb|AEK24047.1| DNA mismatch repair protein mutS [Capnocytophaga canimorsus Cc5]
Length = 855
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 256/939 (27%), Positives = 423/939 (45%), Gaps = 178/939 (18%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASIPTFR 149
+Q ++K KYPD LL+ VG + FGEDA AA+VL I +N A P
Sbjct: 2 KQYNQIKAKYPDALLLFRVGDFYETFGEDAVKAAQVLDIVLTNRNNGSERTELAGFPHHS 61
Query: 150 LNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
+N ++ +LV AG++V + Q E +K G RG++ L T V
Sbjct: 62 INNYLPKLVKAGYRVAICDQLEDPKTVK-------GIVKRGVTELVTPG-------VALN 107
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D +SN + V N+ GV ++ISTG+ + + + +
Sbjct: 108 DDILHSKSNNFLASVWFAKNIN---------------GVSFLDISTGEFLVAQGD----K 148
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMS 328
+ ++ +L + P+E+L+ + K+
Sbjct: 149 ANIDKLLQNFKPSEVLVAKKQKKE------------------------------------ 172
Query: 329 LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRHLKQFGLER 386
E+ G+D H +E + D A Q L LK FG+E
Sbjct: 173 FTESFGDDF----------------HLFFLEDWVYKEDYARQILTQHFQTNSLKGFGVEE 216
Query: 387 I----MCLGASFRSLSGSME-----------------MTLSANTLQQLEVLRNNSNGSEY 425
+ + G+ LS + + L T++ LE+ S S+
Sbjct: 217 LTESLLAAGSILYYLSETQHNKLQHITSIQRIVEDAYVWLDKFTIRNLELYTGTS--SQS 274
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
TLL +++ T++ GSR L+RW+ PL D I R + VS MG + + +H
Sbjct: 275 VTLLDVIDKTISAMGSRTLKRWLALPLKDIAKIKQRHEVVSHF---MGHIDVLQKIKEH- 330
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
+ ++ DI+R I+++ TP E + + +
Sbjct: 331 -----------------------ISKTSDIERLISKVATGKITPREVVQLKNS------- 360
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L+ + E + + L +AL +L S + + A T+N+EA ++L
Sbjct: 361 LEMIPPIKEICNQAKNHDL-NALADKL---HSCEELCNQIA---VTLNEEAP--VNILKG 411
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPAN 663
I G +E+ RK S K LD ++ ++ G+ +L ++ +V G +
Sbjct: 412 NAIKEGVSAELDELRKLSVSGKAYLDEMLKRETEKTGISSLKIDYNNVHGYYIEVRNTHK 471
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
KVP +W + + RY + E+ T ++ A E++ + +A + + G Y A+
Sbjct: 472 DKVPQDWIRKQTLVNAERYITEELKTYEAKILGAEEKIAQLEQAIFAELIISIGNYIAQV 531
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FV 781
Q + LDCL A+L+ N+ RP + E + I GRHPV++ L ++
Sbjct: 532 QQNATLIGQLDCLCGFASLALENNYNRP---EMDESFILDIKDGRHPVIEKQLPVGVPYI 588
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
ND L + + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA SA + ++D I+TR
Sbjct: 589 ANDVYLDRDSQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPADSARIGIVDKIFTR 648
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD+I G STF+ E+NEA+ IL N + +SLV++DE+GRGTST+DG++IA+A +YL
Sbjct: 649 VGASDNISMGESTFMVEMNEAALILNNISERSLVLLDEIGRGTSTYDGISIAWAIAEYLH 708
Query: 902 EH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
EH K LF THY ++ ++ F + ++VS ++ +V ++ K+V
Sbjct: 709 EHPSKAKTLFATHYHELNEMTDSFE-RIKNFNVSV-----------KETKDNVLFIRKLV 756
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
G S SFG VA++A +P I +A + KLE+ +S
Sbjct: 757 SGGSAHSFGIHVAKMAGMPQFVIQKANKMLKKLESSHAS 795
>gi|44888195|sp|Q83CQ2.1|MUTS_COXBU RecName: Full=DNA mismatch repair protein MutS
Length = 859
Score = 279 bits (714), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 253/939 (26%), Positives = 422/939 (44%), Gaps = 149/939 (15%)
Query: 81 SQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----- 133
S TT N ++TP+ +Q + +K +YPD+L+ +G + F +DA+ AAK+L I
Sbjct: 7 SPTTQNDFSQHTPMMRQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARG 66
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
H A +P + ++ +LV G V + +Q A GP R ++ +
Sbjct: 67 QSAGHAIPMAGVPYHAVENYLTKLVRLGESVVICEQIGDPATSK------GPVAREVTRI 120
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T T+ + D N L+ + + R G+ ++I+
Sbjct: 121 ITPGTVSDEALLDEHRD------NTLMVIHQEKD----------------RFGIATLDIT 158
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G + E + L A + + PAELL+ + S K A +++
Sbjct: 159 SGRFLIQEI---ISENALFAEIERIRPAELLISEENSVHPLK--------ADSIKRRPPW 207
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA-- 371
F AL + ++ D GI ++P LA+ A
Sbjct: 208 E--FDHATALTLLCQQFQTKSLDGF---------------------GITHLP-LAITAAG 243
Query: 372 -LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L + + ++ L I + A + + ANT + LE++ N G E +L
Sbjct: 244 CLLQYVNYTQKSALPHIHSIQAE----QNEEALFIDANTRRNLELI-TNLQGEEVHSLAW 298
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T GSRLLRRW+ PL D+ L+ R +AVS
Sbjct: 299 LLDHTATPMGSRLLRRWINRPLRDQILLQQRQNAVS------------------------ 334
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQ 547
T++E + Y S + +L D++R + RI R+A P + + + QA+ +QL
Sbjct: 335 -TLLEKRNY---SEIYENLRHIGDLERIVARIALRSARPRDLMQLRQALGVLPTLHQQLT 390
Query: 548 QLHIDGEYREKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L ++ + +E + L L + L + + P VI D G
Sbjct: 391 NLPLNKQLQEIKNNLGLFDELFRLLKKAIIENPPIVI--------------RDGG----- 431
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
+I++G + + R ++ + L L R++ + ++ + + G I
Sbjct: 432 -VIADGYDAPLDELRNMSTNSHQFLIDLEQQERERTKINTVKVGYNRIHGYYIEISRAQA 490
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ P + + + K RY +PE+ D++ + + ++ L
Sbjct: 491 KQAPTEYIRRQTLKNVERYITPELKIFEDKVLSSRSRALAREKELYEQLLDTLIEKLIPL 550
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
Q A+A LD L+ LA + NF P F D P+ I I +GRHP+++ ++ D F+PN
Sbjct: 551 QQCASAIANLDVLNTLAERADTLNFNAPQFCD--YPI-IKIEAGRHPIVENVMTDPFMPN 607
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT+L +R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA +A+L +D I+TR+G
Sbjct: 608 DTHLDEKRRML-IITGPNMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIG 666
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + GRSTF+ E+ E + IL N T +SLV++DE+GRGTST DG+++AYA YL
Sbjct: 667 AADDLASGRSTFMVEMTETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATK 726
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K LF THY ++ + + +V H+ + + ++ + +L+ + G
Sbjct: 727 LKAFALFATHYFELTALASTLQ-AVKNVHLDAV-----------EHEEKIIFLHALREGP 774
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+ S+G +VAQLA +P S I A +LE V S Q
Sbjct: 775 ANKSYGLQVAQLAGIPRSVIQHARQKLEELENPVISETQ 813
>gi|300770018|ref|ZP_07079897.1| DNA mismatch repair protein MutS [Sphingobacterium spiritivorum ATCC
33861]
gi|300762494|gb|EFK59311.1| DNA mismatch repair protein MutS [Sphingobacterium spiritivorum ATCC
33861]
Length = 869
Score = 279 bits (714), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 251/944 (26%), Positives = 424/944 (44%), Gaps = 150/944 (15%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
KK TPL QQ +K KYP LL+ VG + FGEDA AA +LGI + +
Sbjct: 6 KKETPLMQQYNAIKVKYPGALLLFRVGDFYETFGEDAIKAAGILGIVLTKRGSGSESETA 65
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A P L ++ +LV AG +V + Q E RG++ L T +
Sbjct: 66 LAGFPHHSLETYLPKLVRAGQRVAICDQLEDPKTTK------TIVKRGVTELVTPGVSYS 119
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V + NYL V + + G V ++ISTG+ + +
Sbjct: 120 DNIVQQKSN------NYLASVFFEKNSTG----------------VAFLDISTGEFLVAQ 157
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQ-TEKMLLAYAGPASNVRVECASRDCFIGG 320
N+ ++ + +L P E++L + K+ TE S + G
Sbjct: 158 GNNSYI----DKLLQGFKPTEVILAKKQFKEFTEHF-------GSQFYTYTLDEWPYTGD 206
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A ++ +E N GI MP + + A + + +L
Sbjct: 207 YATETLLKHFE--------------------VNSMKGF-GIERMP-VGIIAAGVALHYLN 244
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ + + ++ + M L T++ LE++ S TL +++HT + G
Sbjct: 245 ETEHRNLQHI-SNISRIEEDRYMWLDRFTIRNLELI--GSANENAVTLSDVLDHTASPMG 301
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+RLL+RW+ PL DR I RL+ V +H +N +
Sbjct: 302 ARLLKRWIVMPLKDRVSIQERLNVV-----------------EHFHQNRSLR-------- 336
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE-KV 559
++ + + D++R I++I A P E + + ++ LYA ++L+ L + + K+
Sbjct: 337 --DELVQEIRQVGDLERLISKIGLLKANPREIMQLKRS-LYAIEKLKILTGNADTESLKI 393
Query: 560 TSKTLHS-ALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
S+ L++ +L++ I + A P + K ++++G SE
Sbjct: 394 ISEQLNTCSLIRDRIEREMQAEPPVALNKGN--------------------VMADGIDSE 433
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMR-----NLEFMSVSGITHLIELPANFKVPLNW 670
+ R RK K D L+ + +++ M + F +V G + KVP W
Sbjct: 434 LDRLRKIAFGGK---DYLLEIQKREAEMTGIPSLKIAFNNVFGYYLEVTNTHKDKVPEGW 490
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + RY + E+ +Q+ A E++ ++ + L Y Q Q +
Sbjct: 491 IRKQTLVNAERYITEELKEYEEQILGAEEKIQVIENRLYAELLSAIAEYIKPVQLNAQLV 550
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLH 788
A LD L A ++ +V+P + E + I GRHPV++ L +++ NDT L
Sbjct: 551 AKLDVLLNFAVIAEKNFYVKP---EISESKVLDIKGGRHPVIEKNLPIGQDYITNDTFLD 607
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ + IITGPNM GKS +RQ LI +MAQ+GSFVPA +A + ++D I+TR+GASD++
Sbjct: 608 NDAQQIIIITGPNMAGKSALLRQTGLIVLMAQIGSFVPAKTAHIGLVDKIFTRVGASDNL 667
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKC 906
G STF+ E+NE + I+ N + +SL+++DE+GRGTST+DG++IA+A ++L H +
Sbjct: 668 SSGESTFMVEMNETASIMNNLSDRSLILLDEIGRGTSTYDGISIAWAIAEFLHNHPTARA 727
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ ++ T + ++V+ + + V +L K+VPG SE
Sbjct: 728 KTLFATHYHELNELSTSMP-RIKNFNVTV-----------KEVNNKVIFLRKLVPGGSEH 775
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
SFG VA+LA +PP + RA I +LE E + Q + + R +
Sbjct: 776 SFGIHVAKLAGMPPKLLGRANEILKRLEQERTGGEQIKDSMRKI 819
>gi|262383129|ref|ZP_06076266.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_33B]
gi|262296007|gb|EEY83938.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_33B]
Length = 870
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 255/926 (27%), Positives = 433/926 (46%), Gaps = 148/926 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH-----LDHNFMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA + A++LGI + + A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVIGAEILGIVQTKRANGVGQHVEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + V G F ++ISTG+ + E +
Sbjct: 120 ILNHK-----ENNFLASI--------HFAKEVCGISF--------LDISTGEFMTAEGSI 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP R D +I
Sbjct: 159 DYI----DKLLNNFSPKEVLIERGNKKRFEEAF----GP----RFFIFELDDWIF----- 201
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
T S ED+ + E N + G+ ++ L + A + +L Q
Sbjct: 202 ------------TTSAAEDRLLKHFETKNLKGF--GVQHLK-LGIIASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I + A R + + L T++ LE++ + E +LL +++ T++ GSR+L
Sbjct: 247 THISHITALSR-IEEDRYVRLDKFTVRSLELV--GTMNDEGTSLLDVIDKTISPMGSRML 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
RRW+ PL D I R + V D EP+ +L +
Sbjct: 304 RRWILFPLKDVKPIQERQEVV------------------------DYFFREPETKELLDT 339
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE--KVTSK 562
L +G D++R I+++ +P E + ++ L A + +++ + E ++ +
Sbjct: 340 QLEQIG---DLERIISKVAVGRVSPREVVQ-LKVALRAIEPIKEACMASEEPSLCRIGEQ 395
Query: 563 TLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
AL++ I + P+++ K + VN+E D
Sbjct: 396 LNVCALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDD--------------------L 435
Query: 620 RKAVQSAKEELDSLINMCRKQL---GMRNLE--FMSVSGITHLIELPANFKVPLNWAKVN 674
R S K D L+ + ++++ G+ +L+ F +V G + KVP NW +
Sbjct: 436 RAIAYSGK---DYLLKVQQREIELTGIPSLKIAFNNVFGYYIEVRNTHKDKVPANWIRKQ 492
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ +++ A E++ + ++ + Y Q + +D
Sbjct: 493 TLVNAERYITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRID 552
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAERE 792
CL + A + ++RPV D +I I GRHPV++ L + ++ ND L E++
Sbjct: 553 CLLSFAKAAEANKYIRPVVSDSD---KIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQ 609
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS +RQ ALI +MAQ+G FVPA SA + ++D I+TR+GASD+I G
Sbjct: 610 QIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGE 669
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLF 910
STF+ E+NEAS IL N T++SLV+ DELGRGTST+DG++IA+A ++Y+ EH K LF
Sbjct: 670 STFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLF 729
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ +++ F + Y+VS K +G V +L K++PG SE SFG
Sbjct: 730 ATHYHELNEMERAFK-RIKNYNVSV----KEVG-------NKVIFLRKLIPGGSEHSFGI 777
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAE 996
VA++A +P S + R+ I +LE+E
Sbjct: 778 HVAKMAGMPKSIVKRSNEILKQLESE 803
>gi|161831167|ref|YP_001596673.1| DNA mismatch repair protein MutS [Coxiella burnetii RSA 331]
gi|189030765|sp|A9NCN3.1|MUTS_COXBR RecName: Full=DNA mismatch repair protein MutS
gi|161763034|gb|ABX78676.1| DNA mismatch repair protein MutS [Coxiella burnetii RSA 331]
Length = 859
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 253/939 (26%), Positives = 422/939 (44%), Gaps = 149/939 (15%)
Query: 81 SQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----- 133
S TT N ++TP+ +Q + +K +YPD+L+ +G + F +DA+ AAK+L I
Sbjct: 7 SPTTQNDFSQHTPMMRQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARG 66
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
H A +P + ++ +LV G V + +Q A GP R ++ +
Sbjct: 67 QSAGHAIPMAGVPYHAVENYLTKLVRLGESVVICEQIGDPATSK------GPVAREVTRI 120
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T T+ + D N L+ + + R G+ ++I+
Sbjct: 121 ITPGTVSDEALLDEHRD------NTLMVIHQEKD----------------RFGIATLDIT 158
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G + E + L A + + PAELL+ + S K A +++
Sbjct: 159 SGRFLIQEI---ISENALFAEIERIRPAELLISEENSVHPLK--------ADSIKRRPPW 207
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA-- 371
F AL + ++ D GI ++P LA+ A
Sbjct: 208 E--FDHATALTLLCQQFQTKSLDGF---------------------GITHLP-LAITAAG 243
Query: 372 -LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L + + ++ L I + A + + ANT + LE++ N G E +L
Sbjct: 244 CLLQYVNYTQKSALPHIHSIQAE----QNEEALFIDANTRRNLELI-TNLQGEEVHSLAW 298
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T GSRLLRRW+ PL D+ L+ R +AVS
Sbjct: 299 LLDHTATPMGSRLLRRWINRPLRDQILLQQRQNAVS------------------------ 334
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQ 547
T++E + Y S + +L D++R + RI R+A P + + + QA+ +QL
Sbjct: 335 -TLLEKRNY---SEIYENLRHIGDLERIVARIALRSARPRDLMQLRQALGVLPTLHQQLT 390
Query: 548 QLHIDGEYREKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L ++ + +E + L L + L + + P VI D G
Sbjct: 391 NLPLNKQLQEIKNNLGLFDELFRLLQKAIIENPPIVI--------------RDGG----- 431
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
+I++G + + R ++ + L L R++ + ++ + + G I
Sbjct: 432 -VIADGYDAPLDELRNMSTNSHQFLIDLEQQERERTKINTVKVGYNRIHGYYIEISRAQA 490
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ P + + + K RY +PE+ D++ + + ++ L
Sbjct: 491 KQAPTEYIRRQTLKNVERYITPELKIFEDKVLSSRSRALAREKELYEQLLDTLIEKLIPL 550
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
Q A+A LD L+ LA + NF P F D P+ I I +GRHP+++ ++ D F+PN
Sbjct: 551 QQCASAIANLDVLNTLAERADTLNFNAPQFCD--YPI-IKIEAGRHPIVENVMTDPFMPN 607
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT+L +R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA +A+L +D I+TR+G
Sbjct: 608 DTHLDEKRRML-IITGPNMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIG 666
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + GRSTF+ E+ E + IL N T +SLV++DE+GRGTST DG+++AYA YL
Sbjct: 667 AADDLASGRSTFMVEMTETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATK 726
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K LF THY ++ + + +V H+ + + ++ + +L+ + G
Sbjct: 727 LKAFALFATHYFELTALASTLQ-AVKNVHLDAV-----------EHEEKIIFLHALREGP 774
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+ S+G +VAQLA +P S I A +LE V S Q
Sbjct: 775 ANKSYGLQVAQLAGIPRSVIQHARQKLEELENPVISETQ 813
>gi|303232158|ref|ZP_07318861.1| DNA mismatch repair protein MutS [Veillonella atypica ACS-049-V-Sch6]
gi|302513264|gb|EFL55303.1| DNA mismatch repair protein MutS [Veillonella atypica ACS-049-V-Sch6]
Length = 873
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 258/955 (27%), Positives = 437/955 (45%), Gaps = 161/955 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
KK TP+ +Q +++K+++ D LL +G + F EDA +A++ L I +
Sbjct: 3 KKVTPMMEQYLDIKSRHSDELLFFRLGDFYELFNEDALIASRELNITLTGRPTGNEERTP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGPFGRGLSALYTKATLE 200
+P ++ LV G+KV + +Q E A+K G R + + T T+
Sbjct: 63 MCGVPFHAAESYIETLVKKGYKVAICEQLEDPKAVK-------GIVKRDVIQVITPGTVM 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E+G SN + + V + VF D +STG+V++
Sbjct: 116 T-------ENGNDARSNNFLALF---YLVKEAWILVFSD------------VSTGEVIW- 152
Query: 261 EFNDGFLRSGLEAVLLSLS---PAELLLGQP----------LSKQTEKMLLAYAGPASNV 307
D + + + SLS PAE+++ + + Q ++L+ +V
Sbjct: 153 ---DRVPQDNISQIYDSLSMYRPAEIIIPKGTILPQSIVDFIHNQFNNVVLSPFTSFESV 209
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL 367
C L+NN Q+M G+M L
Sbjct: 210 DFACK-------------------------LANNHFQDM-------------GLMEEDVL 231
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
A AL + +L+ I + + G+ + L ++L+ LE+ N +G GT
Sbjct: 232 A--ALGFMLLYLQDVIKTEIAHINYVHQMDVGN-RLILDTSSLRHLEITHNLRDGGVKGT 288
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL +++ TLT G+RLL++W+ PL D + I R AV+E+ G
Sbjct: 289 LLDVLDRTLTPMGARLLKQWLESPLTDISTIQRRQAAVAELISRNGER------------ 336
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
E Q Y L D +R + RI + +P +F ++ ++ LQ
Sbjct: 337 ------CEIQSY---------LDCIYDFERIVGRIETGSVSPRDFTSLRES-------LQ 374
Query: 548 QL-HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--N 604
L HI +E S S++ R I A + +N+ A+Q L +
Sbjct: 375 VLPHIKNLLKE--FSGLSLSSINNR----------IDNHADIYDLLNRAIAEQPALTLKD 422
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPAN 663
+I +G E+ R +++ L L + R++ G++ ++ V G +
Sbjct: 423 GRVIRDGYNEELDELRSLATNSEVWLQKLEDKAREETGLKLKTKYNKVFGYFFEVSKSQI 482
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
KVP + + +T RY +P++ ++ A E++ + + + + G +
Sbjct: 483 DKVPAYFIRKQTTVNAERYITPDLKEFEIKILSAKEKIVSLEQQLYQDLRNQIKGVIKKV 542
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVP 782
Q +ALA LD L +LAT++ N++ P V + QI+I GRHPV++ L + FVP
Sbjct: 543 QETARALAELDVLASLATVAYESNYICPNIVMNG---QINIRDGRHPVIEKFLKREVFVP 599
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND L+ + E +ITGPNM GKS Y+RQVA++ IMAQ+GSF+PA A + +D ++TR+
Sbjct: 600 NDVVLNHDDEEFMLITGPNMAGKSTYMRQVAILMIMAQIGSFIPAREATISPVDRVFTRV 659
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD I G+STF+ E+ E +YIL N T++SL+I+DE+GRGTST DG++IA A ++++ +
Sbjct: 660 GASDDISTGQSTFMVEMKEVAYILENATSKSLIILDEIGRGTSTFDGLSIAQAVVEHICK 719
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
H LF THY ++ ++ + + Y V+ + +D+ +L +++ G
Sbjct: 720 HIHAKTLFATHYHELIPLEDVYP-RLKNYTVAV-----------KEKGKDIAFLRRIIRG 767
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR--VQNRSAKRDLLVKLS 1015
++ S+G VA+LA LP + RA VI LE + + + NR D +VK +
Sbjct: 768 GADRSYGIHVAKLAGLPAQVLKRAEVILESLEEQNTDTDDLNNRVITSDSVVKYT 822
>gi|255036742|ref|YP_003087363.1| DNA mismatch repair protein MutS [Dyadobacter fermentans DSM 18053]
gi|254949498|gb|ACT94198.1| DNA mismatch repair protein MutS [Dyadobacter fermentans DSM 18053]
Length = 864
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 250/923 (27%), Positives = 426/923 (46%), Gaps = 141/923 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----A 143
K TPL +Q ++K KYP LL+ VG + FGEDA A+K+LGI +N A
Sbjct: 6 KETPLNKQYNQIKAKYPGALLLFRVGDFYETFGEDAVRASKILGIVLTRRNNGGAHEELA 65
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL--EA 201
P L+ ++ +LV AG +V + Q E A G RG++ L T +
Sbjct: 66 GFPHHSLDNYLPKLVRAGERVAICDQLEDPA------AAKGIVKRGVTELVTPGVSFNDN 119
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
D+ ++NYL V +VG +G++G F ++ISTG+ + +
Sbjct: 120 VLDIR--------KNNYLAAV-----HVGS--DGLYGIAF--------LDISTGEFMASQ 156
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N ++ + +L PAE+L + ++ ++ + G +E CF
Sbjct: 157 GNAAYI----DKMLQGFGPAEVLYCKKHKQEFNEL---FGGKYHTFHLEDW---CFGYDY 206
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++ ++ TL G+ ++P L + A + + +L++
Sbjct: 207 GYEQLTGHFQTT---TLKGY------------------GVESLP-LGIIAAGVVLHYLRE 244
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ + + R L + L T++ LE++ G L+ I++HT+T G+
Sbjct: 245 TEHKEVAHISRITR-LEEEKYVWLDRFTVRNLELVYAQQEGGV--PLIDILDHTVTPMGA 301
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R LR+W+ PL D+ I RL AV + S ES
Sbjct: 302 RQLRKWMVLPLKDKAPIEERLSAVEHF---LASEELHES--------------------- 337
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L +G D++R I+++ R P E + + +++ KQ+ +
Sbjct: 338 LVGYFKQIG---DLERLISKVAVRRINPRELVQLKKSL----KQVAPV-----------K 379
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM--IISNGQFSEVARA 619
+ L +L + AS G L+ ++KE D +L+ ++ +G SE+
Sbjct: 380 QLLAGGILDKF---ASQLDACGA---LVEKIDKELRDDAPVLSNQGRMVQSGVDSELDEL 433
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTK 677
K+ L L N ++ G+ +L+ + V G + KVP +W + +
Sbjct: 434 HAISYEGKDYLIKLQNREIERTGISSLKIAYNKVFGYYLEVTHAHQSKVPADWIRKQTLV 493
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
RY +PE+ +++ A + ++ + + +++ + Q ++ALD L
Sbjct: 494 NAERYITPELKEYEEKIMNAEDRISAIEFRIFSELVQKAAEFVGAIQQNALVISALDVLS 553
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQ 795
+ A +R + +PV + +E + I GRHPV++ L +++VPND L +
Sbjct: 554 SFALAARKNKYAKPVISEGNE---LDIKEGRHPVIEQQLPVGESYVPNDVYLDDSSQQII 610
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
IITGPNM GKS +RQ ALI +MAQ+GSFVPA SA + ++D ++TR+GASD++ +G STF
Sbjct: 611 IITGPNMAGKSALLRQTALIVLMAQMGSFVPARSATVGIVDKVFTRVGASDNLSRGESTF 670
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVLFVTH 913
+ E+ E + IL N +++SLV++DE+GRGTST+DGV+IA+A +YL C LF TH
Sbjct: 671 MVEMTETASILNNLSSKSLVLMDEIGRGTSTYDGVSIAWAITEYLHNQSDCRPKTLFATH 730
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + F + ++V+ + D V +L K+ PG S SFG VA
Sbjct: 731 YHELNQLAEDFP-RIKNFNVAV-----------KEVDNKVVFLRKLKPGGSAHSFGIHVA 778
Query: 974 QLAQLPPSCISRATVIAAKLEAE 996
Q+A +P + RA+ I LE +
Sbjct: 779 QIAGMPQPIVLRASEIMQHLEKD 801
>gi|213962943|ref|ZP_03391202.1| DNA mismatch repair protein MutS [Capnocytophaga sputigena Capno]
gi|213954284|gb|EEB65607.1| DNA mismatch repair protein MutS [Capnocytophaga sputigena Capno]
Length = 908
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 265/947 (27%), Positives = 419/947 (44%), Gaps = 192/947 (20%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----A 143
K TPL +Q ++K+KYPD LL+ VG + FGEDA AA L I +N A
Sbjct: 51 KETPLMKQYNQIKSKYPDALLLFRVGDFYETFGEDAVKAAHTLDIVLTNRNNGTERSELA 110
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
P +N ++ +LV AG++V + Q E + G RG++ L T
Sbjct: 111 GFPYHSINTYLPKLVKAGYRVAICDQLEDPKLVK------GIVKRGVTELVTPG------ 158
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
V +D +SN + V +GK G +++STG+ + + +
Sbjct: 159 -VALNDDILQSKSNNFLASV----WLGK-----------QSCGAAFLDVSTGEFLVAQGD 202
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ + +L + P+ELL+ + K+
Sbjct: 203 KTYI----DKLLQNFRPSELLVAKHQKKE------------------------------- 227
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRHLKQ 381
E+ G+D H +E + D A Q L LK
Sbjct: 228 -----FAEHFGDDF----------------HCFYLEDWVFKDDYAQQVLTKHFQTNSLKG 266
Query: 382 FGL----ERIMCLGASFRSLSGSME-----------------MTLSANTLQQLEVLRNNS 420
FG+ E I+ GA LS + + L T++ LE+ N+
Sbjct: 267 FGVDELTEAILTAGAILYYLSETQHHQLQHITAIQRIAEEAYVWLDKFTIRNLELYAGNT 326
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
S +LL +++ TL+ GSR L+RW+ PL +LD + R
Sbjct: 327 TPS--VSLLDVIDKTLSPMGSRTLKRWLALPL-------KKLDKI----------RQRHE 367
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
V + K+ DV L V T+L R DI+R I+++ P E +
Sbjct: 368 VVDYFLKHIDV----------LEQVKTALSRMGDIERLISKVATLKINPREVV------- 410
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKL-----LSTVNKE 595
QL E H L+K+L L +++ ++ KL LS E
Sbjct: 411 -------QLRASLE----------HIPLIKQLCLASANESLSLLGDKLHSCEQLSARIAE 453
Query: 596 AADQGDLLNLM---IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
+ +N+ I+ G + + R S K LD L+ ++ G+ +L+ S +
Sbjct: 454 TLSEDAPVNIAKGNAIAKGFSAALDELRGLSHSGKSYLDDLLLRESQRTGIPSLKIDSNN 513
Query: 653 GITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ IE+ K VP +W + + RY + E+ ++ A E++ + ++ +
Sbjct: 514 VFGYYIEVRNTHKDKVPPDWIRKQTLVNAERYITGELKEYEAKILGAEEKIGQLEQSLYA 573
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+ Y + Q + LDCL ATL+ N+ RP + +E I I GRHP
Sbjct: 574 ELIAFISEYIGQVQTNATLIGQLDCLCGFATLAMENNYHRP---EMNEGYAIDIKDGRHP 630
Query: 771 VLDTILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
V++ L ++ ND L ER+ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA+
Sbjct: 631 VIEKQLPVGTPYIANDVYLDRERQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPAA 690
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
SA+L ++D I+TR+GASD+I G STF+ E+NEA+ IL N + +SLV++DE+GRGTST+D
Sbjct: 691 SAQLGIVDKIFTRVGASDNISMGESTFMVEMNEAALILNNISDRSLVLLDEIGRGTSTYD 750
Query: 889 GVAIAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
G++IA+A +YL EH K LF THY ++ ++ +F + Y+VS
Sbjct: 751 GISIAWAIAEYLHEHPSKAKTLFATHYHELNEMSEQFE-RIKNYNVSV-----------K 798
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V +L K+ G S SFG VA++A +P I +A + KLE
Sbjct: 799 ETKDSVLFLRKLTEGGSAHSFGIHVAKMAGMPQYVIQKANKMLKKLE 845
>gi|383847693|ref|XP_003699487.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Megachile
rotundata]
Length = 1125
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 268/950 (28%), Positives = 429/950 (45%), Gaps = 101/950 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP +Q ELK+K+ D +L +VG + + DA + L + ++ F + P
Sbjct: 217 TPAMRQWWELKSKHYDCVLFFKVGKFYELYHMDAVVGVNELNL-TYMRGEFAHSGFPEIG 275
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAI------KAHGPGKAGPF-GRGLSALYTKATLE-A 201
L+ G+KV V+QTE + K H P K R + + T+ T
Sbjct: 276 YGRFSASLIEKGYKVARVEQTENPEMMAQRCSKMHRPTKFDKVVKREICQISTRGTRAYT 335
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
A DV + SNYL+ +++ K ++G + GV ++ + GD G+
Sbjct: 336 ALDV----EASTPNSNYLLSLIE------KCQSGSNTSHY----GVCFLDTTIGDFYLGQ 381
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
F D S L +L P ++ + LS++T K+L N C ++ +
Sbjct: 382 FEDDRCSSRLLTLLAHYPPVHVVYERGNLSQKTLKIL-------DNTLAACM-KEPLLRE 433
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI------MNMPDLAVQALAL 374
+ +N+ E D PE G EG + +LAV AL
Sbjct: 434 SQFWSSSTTLKNLHEGDYFKKSDSEFSWPE-GLRPYLNEGDSLGLTPADDKELAVHALGG 492
Query: 375 TIRHLKQFGLERIMCLGASFRSLS-------GSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
I LK + LE+ + F+S + GS + AN + + NN G+
Sbjct: 493 CIYLLKDYFLEQQLLAQGRFKSYTPPDFLEDGSSTSSKFANNMILDAITINNLRIFGDGS 552
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
L+ ++ T +G RLLR W+ P C +N+I R +A+ E+ + SE+V
Sbjct: 553 LMKTLDRCCTAFGKRLLREWICRPSCRKNVILERQEAIQELMDH------SETV------ 600
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHR-TATPSEFIAVMQAILYAGKQL 546
S + L PD++R +++I + A +AI++ G+
Sbjct: 601 ---------------QSARSMLATLPDLERLLSKIHAQGNAARLNNHPDGRAIMFEGQTY 645
Query: 547 QQLHI-------DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN--KEAA 597
+ I +G + E + L LI + G+ L T++ K A
Sbjct: 646 SKRKILDFTTTLNG-FEEALKIVALFEDFNTALITRCTKIEPDGEFPSLRETLDYFKTAF 704
Query: 598 D--QGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT 655
D + + ++ G +E + K++ + + ++ G++ + F
Sbjct: 705 DHEEAKKVGCIVPKKGVDAEYDSVLMELSDVKKDAEQYLEKQKQHFGVK-VTFFGSDKKR 763
Query: 656 HLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
+ IE+P + KV + + K RY++ E L + A E V +
Sbjct: 764 YQIEIPDSQVKKVGSGYELTSQRKGYKRYYTAEAKELLSRQIAAEEHKDKVLKDLNRRIF 823
Query: 714 KEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHE-PVQIHICSGRHPVL 772
+F Y + AAV L+ LD L +LA + + + P V D + + I I GRHP
Sbjct: 824 AQFSEKYDMWSAAVYKLSILDVLISLAEYALSGDMCVPEIVSDTDGEIFIEIRDGRHPC- 882
Query: 773 DTILLDNFVPNDTNLH-AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
IL D+F+PNDT L + I+TGPNMGGKS +RQVAL+ IM Q+GS+VPASS
Sbjct: 883 --ILSDSFIPNDTLLGIGDSASFMILTGPNMGGKSTLMRQVALLTIMTQIGSYVPASSCR 940
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
L ++D I+TR+GA+D I G+STFL EL+E + IL++ T SLV++DELGRGTST+DG A
Sbjct: 941 LTLVDRIFTRLGANDDILAGQSTFLVELSETAAILQHATPYSLVLLDELGRGTSTYDGTA 1000
Query: 892 IAYATLDYLLEHKKCMVLFVTHYPK-IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
IA + +D L + KC LF THY + D K K + H++ + ++ G + S
Sbjct: 1001 IAASVVDALTKL-KCRTLFSTHYHSLVEDYKNK--KDITLAHMACMVENEEEGEV---SQ 1054
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ VT+LYK+ G S+GF A+LA +P +R I+ KLE E + +
Sbjct: 1055 ETVTFLYKLSEGACPKSYGFNAARLAGVPLVITNRGHEISKKLEKETNQK 1104
>gi|170288906|ref|YP_001739144.1| DNA mismatch repair protein MutS [Thermotoga sp. RQ2]
gi|238688840|sp|B1LAW3.1|MUTS_THESQ RecName: Full=DNA mismatch repair protein MutS
gi|170176409|gb|ACB09461.1| DNA mismatch repair protein MutS [Thermotoga sp. RQ2]
Length = 793
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 252/920 (27%), Positives = 427/920 (46%), Gaps = 167/920 (18%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TPL +Q + +K +Y D +L+ +G + F EDA++ +KVL I + A IP
Sbjct: 2 KVTPLMEQYLRIKEQYKDSILLFRLGDFYEAFFEDAKIVSKVLNIVLTRRQDAPMAGIPY 61
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDVG 206
LN ++++LV AG+KV + Q E P K+ R ++ + T ++ ED
Sbjct: 62 HALNTYLKKLVEAGYKVAICDQMEE-------PSKSKKLIRREVTRVVTPGSI--VED-- 110
Query: 207 GGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGF 266
+ +NY+ V ++ G R V ++STG+V+ E +D
Sbjct: 111 ---EFLSETNNYMAVVSEEKG----------------RYCTVFCDVSTGEVLVHESSD-- 149
Query: 267 LRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYA--GPASNVRVECASRDCFIGGGALA 324
++T +L Y+ + ++ + R+ F G
Sbjct: 150 -----------------------EQETLDLLKNYSISQIVCSEHLKSSLRERFPGVYT-- 184
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD--------LAVQALALTI 376
E++ E S+ E+ +E N+ D LA++ LA I
Sbjct: 185 ------ESISEWYFSDLEE--------------VEKAYNLKDIHHFELSPLALKTLAALI 224
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
+++K + + L +S M L + T++ L ++ G L ++N+T
Sbjct: 225 KYVKYTMITEDLNLKPPL-LISQRDYMILDSATVENLSLI----PGDRGKNLFDVLNNTE 279
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G+RLL++W+ HPL DR I RL+AV + N V++ E
Sbjct: 280 TPMGARLLKKWILHPLVDRKQIEERLEAVERLV------------------NDRVSLEEM 321
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
+ + LS+V D++R ++R+ + + P + +A+ + + K + L G +
Sbjct: 322 RNF--LSNV-------RDVERIVSRVEYNRSVPRDLVALRETLEIIPKLNEILSNFGVFN 372
Query: 557 EKVTSKTLHSALLKRLILT--ASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+ + L LL+R I SP GK +I G
Sbjct: 373 KLAFPEEL-VDLLRRAIEDDPLGSPGE-GK----------------------VIKRGFSP 408
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAK 672
E+ R ++ A+E L R++ G++ L + IE+ AN K+P ++ +
Sbjct: 409 ELDEYRDLLEHAEERLKEFEEKERERTGIQKLRVGYNQVFGYYIEVTKANLDKIPDDYER 468
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ + R+ +PE+ ++ A E + + + + S +E + + LA
Sbjct: 469 KQTLVNSERFITPELKEFETKIMAAKERIEEMEKELFKSVCEEVKKHKEVLLKLSEDLAK 528
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAERE 792
+D L LA + N+ +PVF +D ++ I GRHPV++ NFV ND + E+
Sbjct: 529 MDVLSTLAYDAILYNYTKPVFSED----RLEIKGGRHPVVER-FTQNFVENDIYMDNEKR 583
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
+ +ITGPNM GKS +IRQV LI +MAQ+GSFVPA A L V D I+TRMGA D + GR
Sbjct: 584 FV-VITGPNMSGKSTFIRQVGLISLMAQIGSFVPAQKAILPVFDRIFTRMGARDDLAGGR 642
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STFL E+NE + IL T +SLV++DE+GRGTST DGV+IA+A + L++ + C VLF T
Sbjct: 643 STFLVEMNEMALILLKSTEKSLVLLDEVGRGTSTQDGVSIAWAISEELIK-RGCKVLFAT 701
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
H+ ++ +++ H + + ++ + K +V + +KVV GV++ S+G +V
Sbjct: 702 HFTELTELEK---------HFPQVQNKTILVKEEGK---NVIFTHKVVDGVADRSYGIEV 749
Query: 973 AQLAQLPPSCISRATVIAAK 992
A++A +P I+RA I +
Sbjct: 750 AKIAGIPDRVINRAYEILER 769
>gi|194336140|ref|YP_002017934.1| DNA mismatch repair protein MutS [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308617|gb|ACF43317.1| DNA mismatch repair protein MutS [Pelodictyon phaeoclathratiforme
BU-1]
Length = 872
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 272/946 (28%), Positives = 438/946 (46%), Gaps = 146/946 (15%)
Query: 81 SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNF 140
++ T K+++P+ +Q +E+K +YPD LL+ VG + F +DA + L I
Sbjct: 4 AEGTIQKEHSPMMRQYLEVKERYPDFLLLFRVGDFYETFFDDAVTVSAALNIVL----TK 59
Query: 141 MTASIPTFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
TA IP H + +LV GFKV V Q E A G R ++ + T
Sbjct: 60 RTAEIPMAGFPHHASEGYIAKLVKKGFKVAVCDQVEDPA------DAKGIVRREITDIIT 113
Query: 196 KATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTG 255
+ + + D C +NYL V +G + GV ++++T
Sbjct: 114 PGITYSDKVL----DDC--HNNYLCAV------------AFLKEGRTLLAGVAFIDVTTA 155
Query: 256 DVVYGEFNDGFLR-SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASR 314
EF L L+ +LSL P+E+L+ +++E LL A + + E
Sbjct: 156 -----EFKIASLHIEELKDFVLSLHPSEVLVSSAEKERSE--LLKKALSSETLVTEL--- 205
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM---NMPDLAVQA 371
D+ +EDQ +V + +++G N A
Sbjct: 206 ---------------------DSWMFSEDQAQEVLSRQFKTHSLKGFGIDGNRAGRVAAA 244
Query: 372 LALT-IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
+ L I +Q L I +G L + MTL T + LE++ + +G++ G+LL
Sbjct: 245 VILQYIEETRQNRLHYITRIG----ELHSAEYMTLDLQTKRNLEIISSMQDGTQNGSLLQ 300
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++ T G+RLLRRW+ PL + I RLDAV E++E
Sbjct: 301 VIDRTRNPMGARLLRRWLQRPLKRVDEIRMRLDAVGELSECR------------------ 342
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
+ LS L+++ D++R + RI P E + + L A LQ+L
Sbjct: 343 ------EMREALSEQLSAIN---DLERCLARIATFRTIPRE-VRQLGLSLSAIPILQEL- 391
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSPAVIGK-AAKLLSTVNKEAADQGDLLNLMIIS 609
L A RLI AS+ + + AA + ++ E+ + + I
Sbjct: 392 -------------LREAGSARLIALASNLKPLPELAASIEQAIDPESG--ASMRDGGYIR 436
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVP 667
G +E+ R +AK+ L + R + +L+ + IE+ AN KVP
Sbjct: 437 TGYHAELDELRTIASTAKDRLLQIQQEERAATTISSLKVSFNKVFGYYIEISRANIDKVP 496
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+ K + RY P L ++ L +EE + + A + AE +A+
Sbjct: 497 AYYEKKQTLVNAERYTIP-ALKEYEEKILNSEEKSFLLEA---QLFHDLCLLIAENASAI 552
Query: 728 QALAAL----DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFV 781
Q AAL D L + A + + +P + HE ++ I GRHPVL+ ++ D +V
Sbjct: 553 QENAALIAEIDSLCSFALCASEYGYCKPEIMT-HE--KLAIVGGRHPVLERMMSAEDPYV 609
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND + E++ IITGPNM GKS ++RQ LI ++AQ GSFVPA AE+ ++D I+TR
Sbjct: 610 PNDCHFD-EKQQMLIITGPNMAGKSSFLRQTGLIVLLAQAGSFVPAERAEIGLVDRIFTR 668
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD++ G STFL E+NEA+ IL N T++SL+++DE+GRGTST DG++IA++ +Y+
Sbjct: 669 VGASDNLASGESTFLVEMNEAASILNNATSKSLLLLDEIGRGTSTFDGMSIAWSMSEYIC 728
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
LF THY ++A+++++ G V Y+ + V+ DS V +L K++
Sbjct: 729 RSIGARTLFATHYHELAELESRLPGVV-NYNAT------VVETADS-----VIFLRKIIR 776
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
G +++S+G +VA++A +P ISRA I A +E QNR K
Sbjct: 777 GSTDNSYGIEVAKMAGMPAEVISRAKEILAGMEKRDIQIPQNRPPK 822
>gi|212218392|ref|YP_002305179.1| DNA mismatch repair protein MutS [Coxiella burnetii CbuK_Q154]
gi|212012654|gb|ACJ20034.1| DNA mismatch repair protein [Coxiella burnetii CbuK_Q154]
Length = 871
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 253/939 (26%), Positives = 421/939 (44%), Gaps = 149/939 (15%)
Query: 81 SQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----- 133
S TT N ++TP+ +Q + +K +YPD+L+ +G + F +DA+ AAK+L I
Sbjct: 19 SPTTQNDFSQHTPMMRQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARG 78
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
H A +P + ++ +LV G V + +Q A GP R ++ +
Sbjct: 79 QSAGHAIPMAGVPYHAVENYLTKLVRLGESVVICEQIGDPATSK------GPVAREVTRI 132
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T T+ + D N L+ + + R G+ ++I+
Sbjct: 133 ITPGTVSDEALLDEHRD------NTLMVIHQEKD----------------RFGIATLDIT 170
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G + E + L A + + PAELL+ + S K A +++
Sbjct: 171 SGRFLIQEI---ISENALFAEIERIRPAELLISEENSVHPLK--------ADSIKRRPPW 219
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA-- 371
F AL + ++ D GI ++P LA+ A
Sbjct: 220 E--FDHATALTLLCQQFQTKSLDGF---------------------GITHLP-LAITAAG 255
Query: 372 -LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L + + ++ L I + A + + ANT + LE++ N G E +L
Sbjct: 256 CLLQYVNYTQKSALPHIHSIQAE----QNEEALFIDANTRRNLELI-TNLQGEEVHSLAW 310
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T GSRLLRRW+ PL D+ L+ R +AVS
Sbjct: 311 LLDHTATPMGSRLLRRWINRPLRDQILLQQRQNAVS------------------------ 346
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQ 547
T++E + Y S + +L D++R + RI R+A P + + + QA+ +QL
Sbjct: 347 -TLLEKRNY---SEIYENLRHIGDLERIVARIALRSARPRDLMQLRQALGVLPTLHQQLT 402
Query: 548 QLHIDGEYREKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L ++ + +E + L L + L + + P VI D G
Sbjct: 403 NLPLNKQLQEIKNNLGLFDELFRLLQKAIIENPPIVI--------------RDGG----- 443
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
+I++G + + R ++ + L L R++ + L+ + + G I
Sbjct: 444 -VIADGYDAPLDELRNMSTNSHQFLIDLEQQERERTKINTLKVGYNRIHGYYIEISRAQA 502
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ P + + + K RY +PE+ D++ + + ++ L
Sbjct: 503 KQAPTEYIRRQTLKNVERYITPELKIFEDKVLSSRSRALAREKELYEQLLDTLIEKLIPL 562
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
Q A+A LD L+ LA + NF P F D P+ I I +GRHP+++ ++ D F+PN
Sbjct: 563 QQCASAIANLDVLNTLAERADTLNFNAPQFCD--YPI-IKIEAGRHPIVENVMTDPFMPN 619
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT+L +R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA +A+L +D I+TR+G
Sbjct: 620 DTHLDEKRRML-IITGPNMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIG 678
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + GRSTF+ E+ E + IL N T +SLV++DE+GRGTST DG+++AYA YL
Sbjct: 679 AADDLASGRSTFMVEMTETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATK 738
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K LF THY ++ + + +V H+ + + ++ + +L+ + G
Sbjct: 739 LKAFALFATHYFELTALASTLP-AVKNVHLDAV-----------EHEEKIIFLHALREGP 786
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+ S+G +VAQLA +P S I A + E V S Q
Sbjct: 787 ANKSYGLQVAQLAGIPRSVIQHARQKLEEFENPVISETQ 825
>gi|358063956|ref|ZP_09150552.1| DNA mismatch repair protein mutS [Clostridium hathewayi WAL-18680]
gi|356697825|gb|EHI59389.1| DNA mismatch repair protein mutS [Clostridium hathewayi WAL-18680]
Length = 883
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 257/954 (26%), Positives = 439/954 (46%), Gaps = 166/954 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMTAS 144
+P+ Q VE K +Y D +L +G + F EDA E+ + G L+
Sbjct: 5 SPMMQHYVETKKQYHDCILFYRLGDFYEMFFEDAITVARELEITLTGKECGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ ++ RLV G+KV + +Q E + G R + + T T+ +A+
Sbjct: 65 VPYHAVDTYLNRLVQKGYKVAIAEQVEDPKLAK------GLVKREVIRVVTPGTITSAQA 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ NYL+ +V GD F GV A +ISTGD + E +
Sbjct: 119 LDETKN------NYLMGIV------------YLGDMF----GVAAADISTGDFLVTEVQN 156
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSK---QTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L + +P+E++ + E++ + Y S++ + F
Sbjct: 157 ---ERELWDEVHKFTPSEIICNEAFYMSGIDLEELKIRYHVTISSLD------NHFFSDD 207
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ ++ + +G ++D ++ S + +A A+ + ++
Sbjct: 208 SCRRILREHYRVG----------SLDGLGLADYDSGV--------IAAGAVMQYLYETQK 249
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
LE I + +G M + +T + LE++ + GTLL +++ T T G+
Sbjct: 250 STLEHITTISPY---TTGEF-MIIDLSTRRNLELVETMREKQKRGTLLWVLDKTKTAMGA 305
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLR ++ PL + I R +AV E+ SY E + ++ + P +
Sbjct: 306 RLLRTYIEQPLVHKAQILERQEAVEELN---NSYINREEICEY---------LNPIY--- 350
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HID---GEYRE 557
D++R I RI ++TA P + IA + L+ L HI GE+R
Sbjct: 351 ------------DLERLIGRISYKTANPRDLIAFRNS-------LEMLPHIKNLLGEFR- 390
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNGQF 613
S LL RL + + + ++ +E D G II +G
Sbjct: 391 --------SPLLGRLYEELDTLEDVYDL--IFRSIEEEPPITVRDGG------IIKDGYS 434
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWA 671
E R R A K L L R++ G++ L+ + E+ +FK VP +
Sbjct: 435 EEADRLRHAKTEGKTWLAELEAKEREKTGIKGLKIKFNKVFGYYFEVTNSFKEMVPDYFI 494
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANE------ELTIVCRAAWDSFLKEFGGYYAEFQA 725
+ + RY + E L L+++ + E E ++ C DS G Q
Sbjct: 495 RKQTLANAERYTTSE-LKELEEIIMGAEDKLFSLEYSLFCEIR-DSI----GAEVLRIQK 548
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPND 784
A +A+A +D +L+ ++ N+V+P +E +IHI +GRHPV++ +L ++ FV ND
Sbjct: 549 AAKAIAGIDVFASLSVVATRNNYVKPSI---NEKGEIHIKNGRHPVVELMLREDLFVAND 605
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T L ++ IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA A++ + D I+TR+GA
Sbjct: 606 TLLDNQKNRVSIITGPNMAGKSTYMRQTALIVLMAQLGSFVPADEADIGLCDRIFTRVGA 665
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
SD + G+STF+ E+ E + ILRN T SL+I+DE+GRGTST DG++IA+A ++++ K
Sbjct: 666 SDDLASGQSTFMVEMTEVANILRNATKDSLIILDEIGRGTSTFDGLSIAWAVVEHISNTK 725
Query: 905 --KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
LF THY ++ +++ +G +Y + K G D+ +L K++ G
Sbjct: 726 ILGAKTLFATHYHELTELEGTMSGV-----TNYCIAVKEQG-------DDIVFLRKIIKG 773
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEA--------EVSSRVQNRSAKR 1008
++ S+G +VA+LA +P + I RA + +L + E++ + N +AK+
Sbjct: 774 GADKSYGIQVAKLAGVPDTVIERAKELVEELSSADITVRAKEIAQQSANVAAKK 827
>gi|73748908|ref|YP_308147.1| DNA mismatch repair protein MutS [Dehalococcoides sp. CBDB1]
gi|115299207|sp|Q3ZYA0.1|MUTS_DEHSC RecName: Full=DNA mismatch repair protein MutS
gi|73660624|emb|CAI83231.1| DNA mismatch repair protein MutS [Dehalococcoides sp. CBDB1]
Length = 858
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 272/955 (28%), Positives = 443/955 (46%), Gaps = 165/955 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFM-------T 142
TPL +Q +++K YP+ ++ +G + F EDA +AA+ L I L M
Sbjct: 5 TPLRKQYLDIKKNYPEAIVFFRLGDFYETFEEDARIAARELEIV--LTSREMGKGLKVPL 62
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
A IP L+ ++ RL+N G+KV + +Q PG+ G R ++ L T T+
Sbjct: 63 AGIPYHALDNYLSRLINKGYKVAICEQVTK-------PGETKGLVQRQVTRLVTPGTVVE 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ ++ N+L+ + + + G F D G IS
Sbjct: 116 PNLLQTKQN------NFLLSLYLTEDSCGL----AFADISTSEFGCTQTNISE------- 158
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
LEA + LSPAE++L + Q+ + + +++ + D +
Sbjct: 159 ---------LEAEISRLSPAEIILPK---NQSLNLPI-------HLKATISKLDGYYFEA 199
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+A E L + E QN+ G NMP LA+ A + +L++
Sbjct: 200 DIAR---------ERLLRHFECQNLSA----------YGCENMP-LAISAAGALLNYLEE 239
Query: 382 FG------LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
LER+ S + + M+M ++TL LE+ R++ S G+LL I++ T
Sbjct: 240 TQKSSLKQLERL-----SVYTTADYMQM--DSHTLSNLEIFRSSGGNSLKGSLLGILDQT 292
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G RLLR+++ PL ++ I RL AV Y ES+ +
Sbjct: 293 KTAMGGRLLRKFLGQPLLKQSDIEKRLSAVD--------YFFEESLAR------------ 332
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
+S+ SLG+ D++R RI +T P E I++ ++
Sbjct: 333 -------TSLAKSLGQIADMERMANRIRQKTILPRELISLKNSL---------------- 369
Query: 556 REKVTSKTLHSALLK--RL--ILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIIS 609
E V++ L+ RL L P ++L +NK D L + +I
Sbjct: 370 -ETVSAIHRQFGLMPPPRLAYFLNGLKPL-----PEMLDIINKTITDDPPSTLGDGKVIR 423
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVP 667
G E+ + A+ L + R++ G+++L+ + IE+ AN VP
Sbjct: 424 AGFDPEMDKLCSLAGDARTFLSQMETRERERTGIKSLKLGYNRVFGYYIEISNANLGDVP 483
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+ + + R+ +PE+ + + A E L + ++ L + GG+Y+ A
Sbjct: 484 PEFIRKQTLVNAERFITPELKEYENLILNAKERLLEMETGLYEQVLNQLGGFYSALLANA 543
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTN 786
ALAALD L A A ++ ++VRPVF H ++ I GRHP+++ L +FV ND +
Sbjct: 544 TALAALDVLSAFAEVAVRNSYVRPVF---HPENRLDIRKGRHPMVEQGLGYGSFVANDIS 600
Query: 787 LHAEREYCQII--TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
L AE CQII TGPNM GKS Y++Q ALI +MAQ+GS+VPA +AEL + D I+TR+GA
Sbjct: 601 LSAED--CQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFTRIGA 658
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+ + G+STF+ E+ E + IL T++SL+I+DE+GRGTST+DG+AIA A ++Y+
Sbjct: 659 REDLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQP 718
Query: 905 K--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
LF THY ++ ++ SYL K S+ +V +L+K+VPG
Sbjct: 719 SLTAKTLFATHYHELVEL------------ASYLPRVKNYNIAVSEDRGEVVFLHKIVPG 766
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
+ S+G VA+LA LP I RA + +LE + ++R+ + L + ++ Q
Sbjct: 767 GVDKSYGIHVAKLAGLPKWVIKRAYEVLTELENPAKKQPKSRTCQSQLQLPMTGQ 821
>gi|114562239|ref|YP_749752.1| DNA mismatch repair protein MutS [Shewanella frigidimarina NCIMB 400]
gi|122300465|sp|Q086A1.1|MUTS_SHEFN RecName: Full=DNA mismatch repair protein MutS
gi|114333532|gb|ABI70914.1| DNA mismatch repair protein MutS [Shewanella frigidimarina NCIMB 400]
Length = 861
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 266/961 (27%), Positives = 426/961 (44%), Gaps = 154/961 (16%)
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN--- 139
T+ +K+TP+ +Q + LK +PD+LL +G + F +DA+ A+++LGI
Sbjct: 6 TSDLEKHTPMMRQYLGLKAAHPDMLLFYRMGDFYELFYDDAKRASEMLGISLTARGKSGG 65
Query: 140 --FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKA 197
A IP + ++ +LVN G V + +Q A GP R + + T
Sbjct: 66 DPIPMAGIPYHAVEGYLAKLVNIGQSVAICEQIGDPATSK------GPVERQVVRIVTPG 119
Query: 198 TLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
TL ++ + D + + G G G+ ++IS+G
Sbjct: 120 TL----------------TDEALLQEKQDNLLAALYQGKTGFGY------ATLDISSGRF 157
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA-SRDC 316
V E R LEA L +PAELL + + MLL R E D
Sbjct: 158 VVAELPT---REALEAELQRTNPAELLYSEDFTD----MLLINNMKGIRRRPEWEFDYDT 210
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
I N+ + + G GI + LA+QA +
Sbjct: 211 CI--------------------------NLLLNQFGTKDLHGFGITD-ARLALQAAGCLM 243
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
+++K + + + R + S + L A T + LE+ +N S G E TL ++++T
Sbjct: 244 QYVKDTQKMALPHINSIVR-FNQSESIILDAATRRNLELTQNLSGGRE-NTLAWVLDNTA 301
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T GSR+L+RW+ PL +R I R AVSE ++E
Sbjct: 302 TPMGSRMLQRWIHEPLRNRQTIQYRHSAVSE-------------------------LIEQ 336
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
Y L L SLG DI+R + R+ R+A P +F + QA+ + Q L I + R
Sbjct: 337 DLYQTLHEQLKSLG---DIERIMARLALRSARPRDFSRLKQALTLLPEIQQTLAICQQPR 393
Query: 557 EKVTSKTL-----HSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
+ L LL+R I+ + P +I D G +I G
Sbjct: 394 LNTLVQLLGEFPEQHDLLERAIVD-NPPMLI--------------RDGG------VIRTG 432
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLN 669
+E+ RK + A + L L ++Q G+ L+ + V G + + +VPL+
Sbjct: 433 YNNELDEWRKLSEGASDYLVELEAREKQQTGINTLKVGYNRVHGYYIEVSRLQSDRVPLS 492
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + K T RY +PE+ +++ + + + + W+ E Q A
Sbjct: 493 YQRRQTLKGTERYITPELKEYEEKVLSSQGKALALEKQLWEQLFDLLLPKLQELQQFATA 552
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHA 789
A LD L A + N+ P D + I+I +GRHPV++ + F+ N L
Sbjct: 553 AAELDILSNFAERAELFNYQCPQMSHD---IGINIEAGRHPVVERVSQAAFIANPVALTP 609
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+R+ I+TGPNMGGKS Y+RQVALI +MA +G FVPA A++ +D I+TR+GASD +
Sbjct: 610 QRQML-IVTGPNMGGKSTYMRQVALITLMAHIGCFVPADHAQIGEIDRIFTRIGASDDLA 668
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
GRSTF+ E+ E + IL N TA SLV++DE+GRGTST+DG+A+A++ +YL ++ + L
Sbjct: 669 SGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTYDGLALAWSAAEYLAKNVSALTL 728
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ + + SV H+ + + D + +++ V G + S+G
Sbjct: 729 FATHYFELTQLP-ELLPSVINVHLDAI-----------EHDDTIAFMHSVQEGAASKSYG 776
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSP 1029
+VA LA +P S I A +LE RD+ + + Q + +P P
Sbjct: 777 LQVAALAGVPASVIKAAKHKLHQLE------------NRDMTLSQQNPTQVSMNLLPPIP 824
Query: 1030 E 1030
E
Sbjct: 825 E 825
>gi|114599394|ref|XP_001134751.1| PREDICTED: DNA mismatch repair protein Msh3 [Pan troglodytes]
Length = 582
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 229/398 (57%), Gaps = 36/398 (9%)
Query: 69 SPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAK 128
S L + S+ YTPLE Q +E+K ++ D +L +E GYK+RFFGEDAE+AA+
Sbjct: 203 SHENLQKTASKSANKRSKSIYTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAAR 262
Query: 129 VLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGR 188
L IY HLDHNFMTASIPT RL VHVRRLV G+KVGVVKQTETAA+KA G ++ F R
Sbjct: 263 ELNIYCHLDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSR 322
Query: 189 GLSALYTKATLEAAEDVGG----------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFG 238
L+ALYTK+TL EDV E ++YL+C+ ++ NV + G
Sbjct: 323 KLTALYTKSTL-IGEDVNPLIKLDDAVNVDEIMTDTSTSYLLCISENKENVRDKKKG--- 378
Query: 239 DGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML- 297
++ +G+V V+ +TG+VV+ F D RS LE + SL P ELLL LS+QTE ++
Sbjct: 379 ---NIFIGIVGVQPATGEVVFDSFQDSASRSELETRMSSLQPVELLLPSALSEQTEALIH 435
Query: 298 --LAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
+ + +RVE F A V Y +DT+ Q
Sbjct: 436 RATSVSVQDDRIRVERMDNIYFEYSHAFQAVTEFY---AKDTVDIKGSQ----------- 481
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLE 414
I GI+N+ + +LA I++LK+F LE+++ +F+ LS ME MT++ TL+ LE
Sbjct: 482 -IISGIVNLEKPVICSLAAIIKYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLE 540
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPL 452
+L+N ++ G+LL +++HT T +G R L++WVT PL
Sbjct: 541 ILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKKWVTQPL 578
>gi|312127451|ref|YP_003992325.1| DNA mismatch repair protein muts [Caldicellulosiruptor hydrothermalis
108]
gi|311777470|gb|ADQ06956.1| DNA mismatch repair protein MutS [Caldicellulosiruptor hydrothermalis
108]
Length = 863
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 247/946 (26%), Positives = 428/946 (45%), Gaps = 153/946 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +E+K K D +L +G + F EDA +A+K L I +
Sbjct: 5 TPMMQQYMEIKQKVRDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +L+ G+KV + +Q E + G R ++ + T T
Sbjct: 65 VPYHSATSYIAKLIEKGYKVAICEQVEDPKLAK------GIVKREITRIITPGTF----- 113
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
++ +N++ C+ D + V++STG E
Sbjct: 114 ---IDENLSTANNFICCISKDRSE----------------FALTFVDVSTG-----EMYS 149
Query: 265 GFLRSGLEAVLLSL---SPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L L+ +L + SP+E+L+ E L + ++ CAS F+
Sbjct: 150 CLLEEDLQKLLNEIGKYSPSEILISH-----IEDELYEF------LKKNCAS---FVQMI 195
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++ YE + D+ + I + N+ + ++ ++++
Sbjct: 196 EFVDLQKCYEVIENQINVGKIDERL-----------ILSVGNLLKYLTETQKISFDYIRR 244
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
F R+ + + NT + LE+ + S+ +LL I++ T T GS
Sbjct: 245 FEFYRVQNY------------LQIDINTKRNLELTESIIQRSKKNSLLGILDQTKTSMGS 292
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY- 500
RLL++W+ PL D I+ RLD+V E+ +Y T V + + D+ + +F Y
Sbjct: 293 RLLKKWIERPLIDVIEINRRLDSVEELK---SNYSTLVQVEELLSRMYDIERLSSKFAYK 349
Query: 501 -ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG-KQLQQLHIDGEYREK 558
+ + L SL RS ++ + ++ S F A + +Y G L+ ++
Sbjct: 350 NVNAKDLLSLKRSIEVLPALKKLL------SSFSAQLLKEIYEGLDTLEDIY-------- 395
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
AL+ I +P + + II +G EV R
Sbjct: 396 --------ALVDNSI-NEDAPVTLKEGG--------------------IIKDGFNEEVDR 426
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNST 676
R +++KE L R G++NL + IE+ +N+ VP + + +
Sbjct: 427 LRNISKNSKELLVQYEEKERNLTGIKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTL 486
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
RY + E+ D++ A+++L + + Q +A LD L
Sbjct: 487 ANAERYITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASYIAILDVL 546
Query: 737 HALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYC 794
+ A ++ + +VRP V++ D +I+I +GRHPV++ ++ NF+PNDT L
Sbjct: 547 CSFARIAIDNEYVRPNVYLGD----RIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRV 602
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS Y+RQVALI IMAQ+G FVPA A + ++D I++R+GASD I G+ST
Sbjct: 603 LIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQST 662
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVT 912
F+ E++E + IL+N T +SL++ DE+GRGTST+DG++IA+A L+Y+ + K LF T
Sbjct: 663 FMVEMSEVANILKNATPKSLIVFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFAT 722
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFGFK 971
HY ++ +++ + G V Y V D K + +++ +L K+V G +SS+G
Sbjct: 723 HYHELTELEERIPG-VKNYRV------------DVKEEGKNIIFLRKIVRGGCDSSYGIH 769
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
VA+LA +P + RA I +LE +R R ++++ + ++Q
Sbjct: 770 VARLAGIPEEVLKRAEEILKQLEEADINRKNIRKLRKEIKKEFTEQ 815
>gi|402494070|ref|ZP_10840816.1| DNA mismatch repair protein MutS [Aquimarina agarilytica ZC1]
Length = 897
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 251/976 (25%), Positives = 447/976 (45%), Gaps = 150/976 (15%)
Query: 64 KKPKLSPHTLN-PIPTPSSQ-TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGE 121
K+ ++ H LN P P + + T+ KK TPL +Q +K KYP LL+ VG + FGE
Sbjct: 2 KRIRILAHQLNYPNPVCAKKATSKEKKVTPLMKQYNAIKAKYPKALLLFRVGDFYETFGE 61
Query: 122 DAEMAAKVLGIY-----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK 176
DA + A +L I A + A P LN ++ +LV AG +V + Q E
Sbjct: 62 DAVITANILNIILTKRGAGSESETALAGFPHHSLNTYLPKLVKAGQRVAICDQLE----- 116
Query: 177 AHGPGKAGPF-GRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNG 235
P + RG++ L T V ++ ++N + V G
Sbjct: 117 --DPKQTKTIVKRGVTELITPG-------VSLNDEVLQSKNNNFLAAVHYGGK------- 160
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEK 295
+LG+ ++ISTG+ + + + + ++ +L + +P+ELL+ SKQ +
Sbjct: 161 --------QLGIAFLDISTGEYLTAQGD----QDTIDKLLQNFTPSELLV----SKQKKN 204
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
GP + ++ Y ED + ++ + N +
Sbjct: 205 TFTENFGP---------------------DYLTFYL---EDWVWKDDYAQETLYTHFNTK 240
Query: 356 SAIEGI----MNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQ 411
S ++G +N +A A+ ++ + L+ I + ++ + + T++
Sbjct: 241 S-LKGFGIDHLNHGIIASGAILHYVKETQHHKLQHI----NKIQRIAEDDFIWMDRFTIR 295
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
LE+ N+ G+ TLL +++ T + G R+L+RW++ PL ++ I R + V
Sbjct: 296 NLELYTPNAIGA--VTLLDVIDKTSSAMGGRMLKRWLSLPLKNKERIETRHEVV------ 347
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
D I ++ + + + +G D++R ++++ +P E
Sbjct: 348 ------------------DFFIQNTDIHHKIGAQIALIG---DLERLVSKVATAKISPRE 386
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
+M ++ + + K LH L R K+ T
Sbjct: 387 VNQLMHSLDAIAPIKKIAEASTQDAVKKIGDALHDCQLLR--------------QKIKET 432
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSV 651
+ +EA ++L I++G +E+ R S K+ L+++++ + G+ +L+ S
Sbjct: 433 LCEEAP--VNILKGKTIADGVHTELDELRGLAFSGKDYLNNMLDRESEATGIPSLKIASN 490
Query: 652 SGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW 709
+ + IE+ K VP +W + + RY + E+ ++ A E++ I+ + +
Sbjct: 491 NVFGYYIEVRNTHKDKVPEHWIRKQTLVSAERYITEELKEYETKILGAEEKILILEQQLF 550
Query: 710 DSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRH 769
+ Y Q + LDCL A L+ +N+ RP F+D + I +GRH
Sbjct: 551 GDLVTWMHEYIQIIQNNAMLIGQLDCLSGFADLALQQNYTRPTFIDGG---ALKITNGRH 607
Query: 770 PVLDTILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPA 827
PV++ L + ++ ND L + +ITGPNM GKS +RQ ALI ++AQ+G FVPA
Sbjct: 608 PVIEKQLPPGEAYIANDVYLDNHEQQIIMITGPNMSGKSAILRQTALIVLLAQIGCFVPA 667
Query: 828 SSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTH 887
+ E+ ++D I+TR+GASD+I G STF+ E+NE + IL N + +SL+++DE+GRGTST+
Sbjct: 668 EAVEMDIVDKIFTRVGASDNISMGESTFMVEMNETASILNNLSDRSLILLDEIGRGTSTY 727
Query: 888 DGVAIAYATLDYLLEHK-KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMD 946
DG++IA+A +YL EH K LF THY ++ D+ F + Y+V+
Sbjct: 728 DGISIAWAISEYLHEHPCKPKTLFATHYHELNDMCDTF-DRIKNYNVAV----------- 775
Query: 947 SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSA 1006
++ +V +L K+ PG S+ SFG VA++A +P + +A + +LE S + +
Sbjct: 776 KETKDNVLFLRKLTPGGSQHSFGIHVAKMAGMPQHVVKKAQKMLKQLEKSHKSEDISDTL 835
Query: 1007 KRDLLVKLSDQEQEAQ 1022
K+ QE+E Q
Sbjct: 836 KQ-------SQEEEMQ 844
>gi|148236863|ref|NP_001089247.1| mutS homolog 6 [Xenopus laevis]
gi|58399508|gb|AAH89270.1| MGC85188 protein [Xenopus laevis]
Length = 1340
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 259/986 (26%), Positives = 436/986 (44%), Gaps = 140/986 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP ++ +LK++ D ++ +VG + + DA + LG+ + + + P
Sbjct: 384 KCTPGVRKWWQLKSQNFDTVIFYKVGKFYELYHMDAVIGVNELGL-TFMKGTWAHSGFPE 442
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAA-IKAHGPGKAGP------FGRGLSALYTKATLE 200
LV G+KV V+QTET ++A + P R + + TK T
Sbjct: 443 IAFGRFSDVLVQKGYKVSRVEQTETPEMMEARCKSMSHPSKFDRVVRREICRIITKGTQT 502
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDD-DGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
+ G + S YL+C + D + G+ R V+G F V+ S G
Sbjct: 503 YSVLDGNPSE---SHSKYLLCFKEKMDDSSGQRR--VYGVSF--------VDTSVGKFHV 549
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLL--GQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
G+F D S ++ P ++L G P S T+K+L + + ++ S+
Sbjct: 550 GQFEDDRHCSRFRTLVAHFPPVQILFEKGNP-SSDTKKVLKSCLSTSIQESLQPTSQ--- 605
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD----------- 366
+ + + E+ + Q GN S ++ + + D
Sbjct: 606 -----FWDASRTLKTLAEEAYFEKDFQP--ATGNGNLPSVLKSMTSESDSLALTPGEKCE 658
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSL------------------SGSMEMTLSAN 408
LA+ AL I +LK+ +++ + A+F S M L
Sbjct: 659 LALSALGACIYYLKKCLIDQELLSMANFEEYVPVDTDVEKAQTSSNFFAKTSRRMVLDGV 718
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
TL LE+L+N +NGS GTLL ++ T +G RLL++W+ PLC+ I+ RL+AV ++
Sbjct: 719 TLTNLEILQNGTNGSTEGTLLEKLDTCSTPFGKRLLKQWLCAPLCNPFSINDRLNAVEDL 778
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
G +S V L + PD++R +++I H +
Sbjct: 779 MALPGK---------------------------VSEVSELLKKLPDLERLLSKI-HSIGS 810
Query: 529 P------SEFIAVM-QAILYAGKQ-------LQQLHIDGEYREKVTSKTLH--SALLKRL 572
P + AVM + I Y+ K+ L+ + E + H S++LK++
Sbjct: 811 PLKSQNHPDSRAVMYEEITYSKKKIADFLSTLEGFKVMREVISIMEDDVAHFKSSILKQI 870
Query: 573 ILTASS------PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSA 626
+ P + + + ++ + E A + ++ + + E A K V+ A
Sbjct: 871 VCVKDKASHGRFPDLSAELKRWDTSFDHEKARKTGVITPKAGFDPDYDE---ALKDVKQA 927
Query: 627 KEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYH 683
+++L+ ++ RK+LG + + + + + +E+P N +P + ++ K RY
Sbjct: 928 EQDLNEYLDKQRKRLGCKTVVYWGTAKNRYQMEIPENIADRNLPEEYTLKSTKKGFKRYW 987
Query: 684 SPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLS 743
+ + L A E + F Y E+Q AV+ A LD L +L+ S
Sbjct: 988 TKAIEKMFGDLVNAEERRDAALKDCMRRLFYNFDKNYKEWQTAVECFAVLDVLISLSQYS 1047
Query: 744 RNKN--FVRP--VFVDDHEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAERE------ 792
+ + RP V ++ P + + RHP + T D+F+PND + + E
Sbjct: 1048 QGGDGPVCRPEIVLQENGSPF-LELKGSRHPCITKTFFGDDFIPNDILVGCKEEDSDDGS 1106
Query: 793 ---YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+C ++TGPNMGGKS +RQ L +MAQ+G +VPA S L +D ++TR+GASD I
Sbjct: 1107 DEAHCVLVTGPNMGGKSTLLRQAGLQVVMAQLGCYVPADSCRLTPVDRVFTRLGASDRIM 1166
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
G STF EL+E S IL++ T SLV++DELGRGT+T DG AIA A + L E KC L
Sbjct: 1167 AGESTFFVELSETSSILQHATEHSLVLLDELGRGTATFDGTAIAGAVVKELSESIKCRTL 1226
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY + + + + SV H++ + ++ P S + +T+LYK + G S+G
Sbjct: 1227 FSTHYHSLVEDHS-HSQSVRLGHMACMVENECEDP----SQETITFLYKFIKGACPKSYG 1281
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEA 995
F A+LA +P I A + E+
Sbjct: 1282 FNAARLAHIPDEIIQVGHQKAREFES 1307
>gi|312135299|ref|YP_004002637.1| DNA mismatch repair protein muts [Caldicellulosiruptor owensensis OL]
gi|311775350|gb|ADQ04837.1| DNA mismatch repair protein MutS [Caldicellulosiruptor owensensis OL]
Length = 863
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 251/948 (26%), Positives = 431/948 (45%), Gaps = 157/948 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +E+K K D +L +G + F EDA +A+K L I +
Sbjct: 5 TPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +L+ G+KV + +Q E + G R ++ + T T
Sbjct: 65 VPYHSATSYIAKLIEKGYKVAICEQVEDPKLAK------GIVKREITRIITPGTF----- 113
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
++ +N++ C+ + F+ L V DV GE
Sbjct: 114 ---IDENLSTANNFICCIS--------------KNRFEFALTFV-------DVSTGEMYS 149
Query: 265 GFLRSGLEAVLLSL---SPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ L+ +L + +P+E+L+ + +E L Y ++ C S F+
Sbjct: 150 CLIEEDLQKLLNEIGKYNPSEILISR-----SEDELYEY------LKKNCTS---FVQMI 195
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++ YE + D+ + I + N+ + ++ ++++
Sbjct: 196 EFVDLQKCYEIIENQINVGKIDERL-----------ILSVGNLLKYLTETQKISFDYIRR 244
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
F RI + + NT + LE+ + S+ +LL I++ T T GS
Sbjct: 245 FEFYRIQNY------------LQIDINTKRNLELTESIIQRSKKNSLLGILDQTKTSMGS 292
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL D I+ RLD+V ++ S Y I
Sbjct: 293 RLLKKWIERPLIDVIEINRRLDSVEQLKSS---------------------------YSI 325
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDGEYREKV 559
L + L R DI+R ++ ++ + +++ ++I L A K+L
Sbjct: 326 LVQIEELLSRMYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLS----------- 374
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA---ADQGDLLNLMIISNGQFSEV 616
+ + LLK + + I A + S++N+ A +G II +G EV
Sbjct: 375 ---SFSAQLLKEIYEGLDTLEDI--YALVDSSINEGAPVTLKEGG-----IIKDGFNEEV 424
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVN 674
R R +++KE L R G++NL + IE+ +N+ VP + +
Sbjct: 425 DRLRNISKNSKELLVQYEEKERNLTGIKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQ 484
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ D++ A+++L + + Q +A LD
Sbjct: 485 TLANAERYVTEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASYIAILD 544
Query: 735 CLHALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAERE 792
L + A ++ + +VRP V++ D +I+I +GRHPV++ ++ NF+PNDT L
Sbjct: 545 VLCSFARIAIDNEYVRPNVYLGD----KIYIKNGRHPVVEKMIGRGNFIPNDTELDQVEN 600
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS Y+RQVALI IMAQ+G FVPA A + ++D I++R+GASD I G+
Sbjct: 601 RILIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQ 660
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLF 910
STF+ E++E + IL+N T +SL+I DE+GRGTST+DG++IA+A L+Y+ + K LF
Sbjct: 661 STFMVEMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLF 720
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFG 969
THY ++ +++ + G V Y V D K + ++V +L K+V G +SS+G
Sbjct: 721 ATHYHELTELEERIPG-VKNYRV------------DVKEEGKNVIFLRKIVRGGCDSSYG 767
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
VA+LA +P + RA I +LE +R R +R++ + ++Q
Sbjct: 768 IHVARLAGIPEDVLKRAEEILKQLEEADINRKSIRKLRREIKKEFTEQ 815
>gi|302871703|ref|YP_003840339.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
gi|302574562|gb|ADL42353.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
Length = 863
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 247/945 (26%), Positives = 429/945 (45%), Gaps = 151/945 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +E+K K D +L +G + F EDA +A+K L I +
Sbjct: 5 TPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +L+ G+KV + +Q E + G R ++ + T T
Sbjct: 65 VPYHSATSYIAKLIEKGYKVAICEQVEDPKLAK------GIVKREITRIITPGTF----- 113
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
++ +N++ C+ + + V++STG E
Sbjct: 114 ---IDENFSTANNFICCISRNRSE----------------FALTFVDVSTG-----EMYS 149
Query: 265 GFLRSGLEAVLLSL---SPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ L+ +L + +P+E+L+ + +E L Y ++ C S F+
Sbjct: 150 CLIEEDLQKLLNEIGKYNPSEILISR-----SEDELYEY------LKKNCTS---FVQMI 195
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++ YE + D+ + I + N+ + ++ ++++
Sbjct: 196 EFVDLQECYEVIENQINVGKIDERL-----------ILSVGNLLKYLTETQKISFDYIRR 244
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
F R+ + + NT + LE+ + S+ +LL I++ T T GS
Sbjct: 245 FEFYRVQNY------------LQIDINTKRNLELTESIIQRSKKNSLLGILDQTKTSMGS 292
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL D I+ RLD+V ++ S Y I
Sbjct: 293 RLLKKWIERPLIDVIEINRRLDSVEQLKSS---------------------------YSI 325
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDGEYREKV 559
L + L R DI+R ++ ++ + +++ ++I L A K+L
Sbjct: 326 LVQIEELLSRMYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLS----------- 374
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
+ + LLK + + I S++N++A L II +G EV R
Sbjct: 375 ---SFSAQLLKEIYEDFDTLEDIHSLID--SSINEDAP--VTLKECGIIKDGFNEEVDRL 427
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNSTK 677
R +++KE L R G++NL + IE+ +N+ VP + + +
Sbjct: 428 RNISKNSKELLVQYEEKERNLTGIKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLA 487
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
RY + E+ D++ A+++L + + Q +A LD L
Sbjct: 488 NAERYVTEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASYIAILDVLC 547
Query: 738 ALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQ 795
+ A ++ + +VRP V++ D +I+I +GRHPV++ ++ NF+PNDT L
Sbjct: 548 SFARIAIDNEYVRPNVYLGD----KIYIKNGRHPVVEKMIGRGNFIPNDTELDQVENRVL 603
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
IITGPNM GKS Y+RQVALI IMAQ+G FVPA A + ++D I++R+GASD I G+STF
Sbjct: 604 IITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQSTF 663
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVTH 913
+ E++E + IL+N T +SL+I DE+GRGTST+DG++IA+A L+Y+ + K LF TH
Sbjct: 664 MVEMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATH 723
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFGFKV 972
Y ++ +++ K G V Y V D K + ++V +L K+V G +SS+G V
Sbjct: 724 YHELTELEEKIPG-VKNYRV------------DVKEEGKNVVFLRKIVRGGCDSSYGIHV 770
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
A+LA +P + RA I +LE +R R ++++ + ++Q
Sbjct: 771 ARLAGIPEEVLKRAEEILKQLEEADINRKSIRKLRKEIKKEFTEQ 815
>gi|407768113|ref|ZP_11115492.1| DNA mismatch repair protein MutS [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288826|gb|EKF14303.1| DNA mismatch repair protein MutS [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 907
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 272/983 (27%), Positives = 442/983 (44%), Gaps = 134/983 (13%)
Query: 73 LNPIPTPSSQTT-----HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAA 127
+N I PS T + TP+ Q +E+K +Y D LL +G + F +DA AA
Sbjct: 1 MNNIADPSDTQTVPLSFDTEGATPMMMQFLEIKEQYQDCLLFYRMGDFYELFFDDAVKAA 60
Query: 128 KVLGIY-----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGK 182
+ L I H + A +P +++RL+ GF+V V +Q E A +A G
Sbjct: 61 EALDIALTKRGKHQGNEIPMAGVPVHSHETYLQRLIRKGFRVAVCEQMEDPA-EAKKRGA 119
Query: 183 AGPFGRGLSALYTKATLEAAEDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDG 240
RG+ L T TL ED NYL V + G VG
Sbjct: 120 KSVVKRGVVRLITPGTLT--------EDSLLDARRHNYLAAVSEVRGKVG---------- 161
Query: 241 FDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY 300
+ +++STGD + G GL A L L ELL+ L ++E M Y
Sbjct: 162 ------LAWLDMSTGDFYVQPCDMG----GLPAALARLDAGELLISDKLLNRSE-MFDIY 210
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
A + + + ASR F A + LYE D E + SA
Sbjct: 211 AEYKNVITPQPASR--FDAENAQLRLKKLYEVAALDAFGGFEIAEL---------SAAGA 259
Query: 361 IMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNS 420
+++ DL + + + + M GA+ M + A T + LE+ + S
Sbjct: 260 LIDYVDLTQKG------QMPRLAPPQRMAAGAA---------MEIDAATRRSLELTQTQS 304
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
G G+LL +++ T T G+RLL ++ PL D I+ RLD V
Sbjct: 305 -GERKGSLLSVIDRTRTGAGARLLAARLSAPLTDAGTINKRLDLVYYF------------ 351
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
HD + S + +LG PDI+R ++R+ P + A+ +
Sbjct: 352 ---HDRDA------------LRSDLRAALGECPDIERALSRLSVGRGGPRDLAAMRDGLA 396
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG 600
A LH + +T++ +AL+ L +G L+ + + ++
Sbjct: 397 CAFAIGNLLHKPDGGNDGLTAQP--AALIDHL-------TDMGHHGDLVDLLRRSLSENL 447
Query: 601 DLL--NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLI 658
LL + I+ G + R +K+ + +L +Q + +L+ + + + I
Sbjct: 448 PLLARDGGFIAGGYHPPLDELRMLSSESKKLIANLQARYTEQTAITSLKVKHNNVLGYFI 507
Query: 659 ELPANFKVPL----NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
E+PA + + + +R+ + E+ +++ A ++ + +DS +
Sbjct: 508 EVPAKQADRMMEIDEFIHRQTMANAVRFTTVELSELESKVSKAGDQALALELELFDSLVT 567
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
+ QALA LD ALA L+R++ +RP +DD + I GRHPV++
Sbjct: 568 GVLEHADAIARCAQALAGLDVSAALAELARDQVCIRPT-IDDS--LAFDIRGGRHPVVEA 624
Query: 775 ILLDN----FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
L +N FV ND L E+ +ITGPNM GKS ++RQ ALI ++AQ+G+FVPA +A
Sbjct: 625 ALRENGDSPFVANDCRLEGEQSLW-LITGPNMAGKSTFLRQNALIAVLAQIGAFVPAETA 683
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
+ V+D +++R+GA+D + +GRSTF+ E+ E + IL + +SLVI+DE+GRGT+T DG+
Sbjct: 684 HIGVIDRLFSRVGAADDLARGRSTFMVEMVETAAILNQASDRSLVILDEIGRGTATFDGL 743
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
+IA+A ++ L E KC LF THY ++ + K +++L+ H + + +
Sbjct: 744 SIAWAVVENLHEVNKCRGLFATHYHELTALAAK---------LAHLSCHTM---LIKEWQ 791
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE-AEVSSRVQNRSAKRD 1009
+V +L++V G ++ S+G VAQLA LP I RA + LE E S V +
Sbjct: 792 GEVVFLHEVGAGSADRSYGIHVAQLAGLPKPVIKRAEQVLKTLEKGEQSGAVSKLADDLP 851
Query: 1010 LLVKLSDQ-EQEAQENMP-VSPE 1030
L +Q +QE + P +SPE
Sbjct: 852 LFAAAIEQVKQEEKAKTPALSPE 874
>gi|222529489|ref|YP_002573371.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
gi|254766611|sp|B9MJU0.1|MUTS_ANATD RecName: Full=DNA mismatch repair protein MutS
gi|222456336|gb|ACM60598.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
Length = 863
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 248/943 (26%), Positives = 423/943 (44%), Gaps = 147/943 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +E+K K D +L +G + F EDA +A+K L I +
Sbjct: 5 TPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +L+ G+KV + +Q E + G R ++ + T T
Sbjct: 65 VPYHSATSYIAKLIEKGYKVAICEQVEDPKLAK------GIVKREITRIITPGTF----- 113
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+D +N++ C+ D + V++STG E
Sbjct: 114 ---IDDNISTANNFICCISKDRS----------------EFALTFVDVSTG-----EMYS 149
Query: 265 GFLRSGLEAVLLSL---SPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L L+ ++ + SP+E+L+ E L + ++ C S F+
Sbjct: 150 CLLEEDLQKLVNEIGKYSPSEILISN-----IEDELYEF------LKKNCTS---FVQMI 195
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++ +E + D+ + I + N+ + ++ ++++
Sbjct: 196 EFVDLQKCHEIIENQINVGKIDEKL-----------ILSVGNLLKYLTETQKISFDYIRR 244
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
F R+ + + NT + LE+ + S +LL I++ T T GS
Sbjct: 245 FEFYRVQNY------------LQIDINTKRNLELTESIIQRSRKNSLLGILDQTKTSMGS 292
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL D I+ RLD+V E+ + Y
Sbjct: 293 RLLKKWIERPLIDIIEINKRLDSVEELKSN---------------------------YST 325
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L V L R DI+R ++ ++ + +++ ++I Q L
Sbjct: 326 LVQVEELLSRMYDIERLSSKFAYKNVNAKDLLSLKKSIEVLPTLKQFLS----------- 374
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
+ S LLK + + I A + S++N++A L II G EV R R
Sbjct: 375 -SFDSELLKEIYEGLDTLEDI--YALIDSSINEDAP--VSLKEGGIIKEGFNEEVDRLRN 429
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNSTKKT 679
+++KE L R G++NL + IE+ +N+ VP + + +
Sbjct: 430 ISKNSKELLVEYEEKERNLTGIKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLANA 489
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY + E+ D++ A+++L + + Q +A LD L +
Sbjct: 490 ERYITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASNIANLDVLCSF 549
Query: 740 ATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQII 797
A ++ + +VRP V++ D +I+I +GRHPV++ ++ NF+PNDT L II
Sbjct: 550 ARIAIDNEYVRPNVYLGD----RIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLII 605
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS Y+RQVALI IMAQ+G FVPA A + V+D I++R+GASD I G+STF+
Sbjct: 606 TGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGVVDKIFSRIGASDDISSGQSTFMV 665
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVTHYP 915
E++E + IL+N T +SL+I DE+GRGTST+DG++IA+A L+Y+ + K LF THY
Sbjct: 666 EMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYH 725
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFGFKVAQ 974
++ +++ + G V Y V D K + +++ +L K+V G +SS+G VA+
Sbjct: 726 ELTELEERIPG-VKNYRV------------DVKEEGKNIIFLRKIVRGGCDSSYGIHVAR 772
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
LA +P + RA I +LE +R R +R++ + ++Q
Sbjct: 773 LAGIPEEVLKRAEEILKQLEEADINRKNIRKLRREIKKEFTEQ 815
>gi|385825393|ref|YP_005861735.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii DPC 6026]
gi|417837009|ref|ZP_12483249.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii pf01]
gi|329666837|gb|AEB92785.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii DPC 6026]
gi|338762688|gb|EGP13955.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii pf01]
Length = 857
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 250/945 (26%), Positives = 413/945 (43%), Gaps = 158/945 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
K TP+ +Q E+K +YPD L VG + F +DA A++L + N
Sbjct: 4 KDTTPMMKQYYEIKEQYPDAFLFYRVGDFYELFEDDAIKGAQILELTLTHRSNKTKNPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ +V LV G+KV + +Q E P KA G RG+ L T T+
Sbjct: 64 MAGVPHLAVDTYVNTLVEKGYKVALCEQLE-------DPKKAKGMVKRGIIQLITPGTM- 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E +D SNYL V+ + GF G+ ++STG+
Sbjct: 116 MQERPDQAKD-----SNYLTSVISTNS------------GF----GLAYSDLSTGETFST 154
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
D G+ LLSL E++ L+ K L A + VE
Sbjct: 155 HLTD---FEGVANELLSLQTREVVYNGHLT-DLNKDFLKKANITVSEPVEVE-------- 202
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
G AE+ + +N+ D I L L+ R L
Sbjct: 203 GEHAEISYVAQNLTNDA----------------------EIKATKQLVAYLLSTQKRSLA 240
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ + S + + +S LE++++ + G+L +++ T T G
Sbjct: 241 HLQVAQ---------SYEPTQYLQMSHTVQTNLELIKSAKTSKKMGSLFWLLDKTSTAMG 291
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL+ W+ PL I+ R + V + + Y+
Sbjct: 292 GRLLKSWIERPLLSVTEITRRQEMVQALLDD---------------------------YF 324
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA------ILYAGKQLQQLHIDGE 554
V+ SL D++R RI + E + + + IL A + H+
Sbjct: 325 TREKVIDSLKGVYDLERLTGRIAFGSVNAREMLQLAHSLGAIPEILNALLETSNPHLQNY 384
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
++ K +H ++ ++ P G +I G
Sbjct: 385 AKQIDPLKGIHDLIVNTIVDNPPLPTTEGG----------------------LIREGVSE 422
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLN-WA 671
++ R R A+ + K+ L + + R+ G+ NL+ + IE+ + KVP + +
Sbjct: 423 QLDRYRDAMNNGKKWLSEMESHEREVTGINNLKVGYNKVFGYYIEVTNSNKSKVPTDRYT 482
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGGYYAEFQAAVQ 728
+ + RY +P++ + AL E +D F+K + Y Q +
Sbjct: 483 RKQTLTNAERYITPDLK---EHEALILEAEAKSTGLEYDLFVKLREDVKKYIPALQKLAK 539
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNL 787
+A+LD L AT+S N+VRP FV D + +I++ +GRHPV++ ++ +++PND +
Sbjct: 540 QIASLDVLTNFATVSEQNNYVRPNFVTDKQ--EINVVNGRHPVVEQVMTAGSYIPNDVKM 597
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ +ITGPNM GKS Y+RQ+ALI IMAQ+GSFVPA SA L + D I+TR+GA+D
Sbjct: 598 DQDTNIF-LITGPNMSGKSTYMRQMALIAIMAQIGSFVPADSATLPIFDQIFTRIGAADD 656
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ G+STF+ E++EA+ L++ T +SLV+ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 LISGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAK 716
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ D+ + HV ++ + + +L+K++PG ++ S
Sbjct: 717 TLFATHYHELTDLDQTLK-HLKNIHVGA-----------TEENGKLIFLHKILPGPADQS 764
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLV 1012
+G VAQLA LP + AT + +LE + +S +Q S + DL V
Sbjct: 765 YGIHVAQLAGLPHKVLREATTMLKRLEKQGASELQPASEQLDLFV 809
>gi|337737054|ref|YP_004636501.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum DSM
1731]
gi|384458562|ref|YP_005670982.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|325509251|gb|ADZ20887.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|336293249|gb|AEI34383.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum DSM
1731]
Length = 869
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 273/1020 (26%), Positives = 460/1020 (45%), Gaps = 187/1020 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ QQ + +K + D +L VG + F EDAE+A++ L G L+
Sbjct: 4 SPMMQQYLSIKENHKDCILFFRVGDFYEMFFEDAEVASRELELVLTGKDCGLEKRAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +LV+ G+KV V +Q E ++ A G K YT ++ ED
Sbjct: 64 VPHHAYAIYASKLVSKGYKVAVAEQLEDPSL-AKGIVKRDVIKVLTPGTYTDSSF--LED 120
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
++NY++ + D K+ F D ISTG EFN
Sbjct: 121 T---------KNNYIMSLFIHD----KVSAMCFAD------------ISTG-----EFNL 150
Query: 265 GFLRSGLEAVLLSLS---PAELLLGQPLS-----KQTEKMLLAYAGPASNVRVECASRDC 316
E +L +S P EL+L + L K E+ + Y ++ E + +
Sbjct: 151 TETELDFEIILNEISKFSPKELVLQENLDDKLVDKIRERFDVVYNRFSNEYFKEHRNENL 210
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT- 375
AEV NM E +S G++ + Q ALT
Sbjct: 211 KAQFSNYAEV-----NMTEGL-----------------KSCANGLIKYI-IDTQKTALTH 247
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
I L+++ + F +++ N+ + LE+ + S+ G+LL +++ T
Sbjct: 248 IDELQKYEI-------VDF--------LSIDINSRRNLELTETLKDKSKKGSLLWVLDKT 292
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G R +R+W+ PL D I+ RLDAV E+ ++ SY N D+ +
Sbjct: 293 STAMGGRQIRKWIERPLIDDEKINLRLDAVEEMLTNV-SY------------NEDLKELL 339
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDG 553
Q Y DI+R +I ++ E I++ +I L A K+L
Sbjct: 340 KQVY--------------DIERLAGKISSKSVNAKEMISLRGSIEKLPAIKKL------- 378
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL-STVNKE---AADQGDLLNLMIIS 609
K +S LL + ++ +G KLL ++N + +G+ II
Sbjct: 379 -------IKNFNSELLVNM---ENALDDLGDIYKLLYESINDNPSLSIKEGN-----IIK 423
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLN 669
G ++ R A K+ + SL N R+ G+++L+ + IE+ K LN
Sbjct: 424 EGYNKDIDELRLAKSHGKQWIASLENTEREVTGIKSLKVSYNKVFGYYIEIT---KSNLN 480
Query: 670 ------WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ + + + RY +PE+ +++ A E+L ++ + +
Sbjct: 481 LVPEGRYIRKQTLTNSERYITPELKEMEEKILGAEEKLVLLEYNVFCEIRERIEKEIDRI 540
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVP 782
+ + + L+ LDC+ + A ++R N+ +PV D V I GRHPV++ ++ NFV
Sbjct: 541 KGSAKILSELDCICSFADVARENNYCKPVIKRDGTLV---IKEGRHPVVEKVIASGNFVA 597
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
NDT ++ +ITGPNM GKS Y+RQV LI +MAQ+G FVPAS+AE+ + D I+TR+
Sbjct: 598 NDTVINNSDNVMMLITGPNMAGKSTYMRQVGLIVLMAQIGCFVPASAAEISICDKIFTRI 657
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL- 901
GASD + G+STF+ E+ E S IL+N T SL+++DE+GRGTST+DG++IA++ ++Y+
Sbjct: 658 GASDDLNAGKSTFMVEMWEVSNILKNATKNSLILLDEVGRGTSTYDGLSIAWSVIEYICK 717
Query: 902 -EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E+ KC LF THY ++ ++ + G + Y ++ K + D+ +L K++
Sbjct: 718 SENLKCKTLFATHYHELTKLEGEIEG-LKNYSIAV-----------KKVNDDIIFLRKII 765
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQE 1020
++ S+G +VA++A LP + RA I LE +N K+ +VK ++
Sbjct: 766 SKGADESYGIEVAKIAGLPEEVLVRAREILKDLEEAKPKTAENTEDKKTNIVKEEPKKDS 825
Query: 1021 AQENMPVSPESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPA----KSFQFLKHARSI 1076
Q + YL R E ++ +D D NP K ++F+K A+ +
Sbjct: 826 YQIDFN------YLER----ESILKELKDT------EIMDMNPIECMNKLYEFIKRAKKL 869
>gi|269836700|ref|YP_003318928.1| DNA mismatch repair protein MutS [Sphaerobacter thermophilus DSM
20745]
gi|269785963|gb|ACZ38106.1| DNA mismatch repair protein MutS [Sphaerobacter thermophilus DSM
20745]
Length = 871
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 275/950 (28%), Positives = 430/950 (45%), Gaps = 167/950 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q + +K +YPD ++ +G + F +DA++AA VL I + A
Sbjct: 3 TPIRRQYLSIKRQYPDTIVFFRLGDFYETFDDDAKLAASVLDITLTSREMGRGNRIPMAG 62
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP ++ RLV AG KV + +Q P GR L + + T
Sbjct: 63 IPCHAAQGYIARLVGAGHKVAICEQI------------GEPTGREL--VERRVTRIVTPG 108
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
++N+ + V DG R G+ +ISTG+ E N
Sbjct: 109 TVTDPAMLDSDTNHYIAAVLLDG---------------ARAGLAVADISTGEFATTEINA 153
Query: 265 GFLRSGLEAV---LLSLSPAELLLGQPLSK-QTEKMLLAYAGPA---------SNVRVEC 311
+ AV LL L PAE++ P S E L A P S R+E
Sbjct: 154 ADPAAARAAVHRELLRLHPAEIV--APASPPDAEDPLPAEVVPEGAYITRRDRSEWRLEV 211
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
A + L + G +TL G P A++A
Sbjct: 212 ADEE-------------LRRHFGVETLEAY------------------GCAGKP-FAIRA 239
Query: 372 LALTIRHL--KQFG-LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
+++L Q G L++I+ L + S M+L T + LE L +S G +L
Sbjct: 240 AGALLQYLAETQVGSLKQIVDLV----TYSTERYMSLDGQTRRNLE-LSESSRGERRHSL 294
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
+ +++ T T G+R+LRRWV PL D + R DAV+ +
Sbjct: 295 IAVLDQTRTPMGARMLRRWVGQPLLDLAELQDRQDAVAYFVDRA---------------- 338
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
+ + + +LG D++R I R+ A P E +++ ++ L ++ +
Sbjct: 339 -----------LVRARLRDALGHVSDLERLINRVVTGAAGPRELLSLARS-LQRLPEINE 386
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTA---SSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
+ DG+ R + + + RLI+ A PAV+G
Sbjct: 387 ILGDGD-RPCLVAGPPDCSETARLIVQALVDEPPAVLGGGPT------------------ 427
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELP-A 662
I G E+ R + + A+E + L R++ G+++L+ F V G + IE+ A
Sbjct: 428 --IRAGFSPELDGLRASSREAREWIAGLEQAERERTGIKSLKVGFNKVFG--YYIEVSRA 483
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
N VP ++ + + RY +PE+ ++ A E + + + L +
Sbjct: 484 NISAVPSDYQRKQTLVNAERYITPELKEYESRVLNAEERIADLEEQVYRRVLAQVAAAAD 543
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD-TILLDNF 780
+AA QA+A LD L ALA ++ + +VRP D + I GRHPV++ T+ F
Sbjct: 544 SVRAAAQAVAQLDVLSALAEVAVRRRYVRPELDDS---TVLEIVGGRHPVVEVTLETGQF 600
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPNDT L E I+TGPNM GKS Y+RQVALI ++AQ+GSFVPA A + ++D I+T
Sbjct: 601 VPNDTYLDTESNQITILTGPNMAGKSTYLRQVALIVLLAQIGSFVPAERARIGLVDRIFT 660
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+GA D I G+STF+ E+ E + IL + T +SLV++DE+GRGTST+DG+AIA A +++L
Sbjct: 661 RIGAQDDIATGQSTFMVEMVETATILHHATPRSLVVLDEIGRGTSTYDGLAIARAVVEHL 720
Query: 901 LEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
+ C LF THY ++ +++ K V Y V L + +V +L++
Sbjct: 721 HNSPRLGCKTLFATHYHELTELE-KILPRVRNYRVDVL-----------EEGDEVVFLHR 768
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE--AEVSSRVQNRSA 1006
VVPG ++ S+G VAQLA +P + + RA I A LE AE + R + R A
Sbjct: 769 VVPGGADRSYGIHVAQLAGMPRAVVRRAGEILADLEGSAERTERGRRRKA 818
>gi|303228559|ref|ZP_07315387.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-134-V-Col7a]
gi|302516806|gb|EFL58720.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-134-V-Col7a]
Length = 873
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 259/947 (27%), Positives = 437/947 (46%), Gaps = 145/947 (15%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
KK TP+ +Q +++K+++ D LL +G + F EDA +A++ L I +
Sbjct: 3 KKVTPMMEQYLDIKSRHCDELLFFRLGDFYELFNEDALIASRELNITLTGRPTGNEERTP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGPFGRGLSALYTKATLE 200
+P ++ LV G+KV + +Q E A+K G R + + T T+
Sbjct: 63 MCGVPFHAAESYIETLVKKGYKVAICEQLEDPKAVK-------GIVKRDVIQVITPGTVM 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E+G SN + + V + VF D +STG+V++
Sbjct: 116 T-------ENGNDARSNNFLALF---YLVKEAWILVFSD------------VSTGEVIW- 152
Query: 261 EFNDGFLRSGLEAVLLSLS---PAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
D + + + SLS PAE+++ P + ++ + N V
Sbjct: 153 ---DRVPQVNISQIYDSLSMYRPAEIIV--PEGTILPQSIVDFIHNQFNNVV-------- 199
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
L+ S L+NN Q+M G+M LA AL +
Sbjct: 200 -----LSPFTSFESVEHACKLANNHFQDM-------------GLMEEDVLA--ALGFMLL 239
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+L+ I + + + G+ + L ++L+ LE+ N +G GTLL +++ TLT
Sbjct: 240 YLQDVIKTEIAHINYAHQMDVGN-RLILDTSSLRHLEITHNLRDGGVKGTLLDVLDRTLT 298
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G+RLL++W+ PL D + I R AV+E+ G E Q
Sbjct: 299 PMGARLLKQWLESPLTDISTIQRRQAAVAELISRNGER------------------CEIQ 340
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HIDGEYR 556
Y L D +R + RI + +P +F ++ ++ LQ L HI
Sbjct: 341 SY---------LDCIYDFERIVGRIETGSVSPRDFTSLRES-------LQVLPHIKN--- 381
Query: 557 EKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQ 612
LLK + +S I A + +N+ A+Q L + +I +G
Sbjct: 382 -----------LLKEFSGLSLSSINTRIDNHADIYDLLNRAIAEQPALTLKDGRVIRDGY 430
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPANFKVPLNWA 671
E+ R +++ L L + R++ G++ ++ V G + KVP +
Sbjct: 431 NEELDELRSLATNSEVWLQKLEDKAREETGLKLKTKYNKVFGYFFEVSKSQIDKVPAYFI 490
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ +T RY +P++ ++ A E++ + + + + G + Q +ALA
Sbjct: 491 RKQTTVNAERYITPDLKEFEIKILSAKEKIVSLEQQLYQDLRNQIKGVIKKVQETARALA 550
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAE 790
LD L +LAT++ N++ P V + QI+I GRHPV++ L + FVPND L+ +
Sbjct: 551 ELDVLASLATVAYESNYICPNIVLNG---QINIRDGRHPVIEKFLKREVFVPNDVVLNHD 607
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
E +ITGPNM GKS Y+RQVA++ IMAQ+GSF+PA A + +D ++TR+GASD I
Sbjct: 608 DEEFMLITGPNMAGKSTYMRQVAILMIMAQIGSFIPAREATISPVDRVFTRVGASDDIST 667
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ E+ E +YIL N T++SL+I+DE+GRGTST DG++IA A ++++ +H LF
Sbjct: 668 GQSTFMVEMKEVAYILENATSKSLIILDEIGRGTSTFDGLSIAQAVVEHICKHIHAKTLF 727
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ ++ + + Y V+ + +D+ +L +++ G ++ S+G
Sbjct: 728 ATHYHELIPLEDVYP-RLKNYTVAV-----------KEKGKDIAFLRRIIRGGADRSYGI 775
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSR--VQNRSAKRDLLVKLS 1015
VA+LA LP + RA VI LE + + + NR D +VK +
Sbjct: 776 HVAKLAGLPAQVLKRAEVILESLEEQNTDTDDLNNRVITSDSVVKYT 822
>gi|163753136|ref|ZP_02160260.1| DNA mismatch repair protein [Kordia algicida OT-1]
gi|161326868|gb|EDP98193.1| DNA mismatch repair protein [Kordia algicida OT-1]
Length = 869
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 257/931 (27%), Positives = 431/931 (46%), Gaps = 148/931 (15%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAHLDH---NFMT 142
KK TPL +Q +KTKYPD LL+ VG + FGEDA AA +LGI H ++ N
Sbjct: 7 KKVTPLMKQYNGIKTKYPDALLLFRVGDFYETFGEDAVKAANILGIVLTHRNNGGDNIEL 66
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEA 201
A P LN ++ +LV AG +V + Q E P + RG++ L T
Sbjct: 67 AGFPHHSLNTYLPKLVKAGERVAICDQLE-------DPKQTKKIVKRGVTELVTPG---- 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V ++ ++N +C + +G LG+ +++STG+ + +
Sbjct: 116 ---VAFNDEVLQAKTNNFLCAIH------------YGKKL---LGISFLDVSTGEFMTTQ 157
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGP-ASNVRVECASRDCFIGG 320
+ ++ + +L + P+E+L+ P K+ E +A SN V F
Sbjct: 158 GSAEYI----DKLLQNFKPSEILI--PKQKKLE-----FADTFGSNHHVFYLEDWVFKAD 206
Query: 321 GALAEVMSLYEN-----MGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
A ++++ ++ G + LS EGI +A A+
Sbjct: 207 FANEKLITHFDTSSLKGFGIEDLS-------------------EGI-----IASGAVLYY 242
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
+ + L+ I S ++ + + T++ LE+ + S + TLL +++ T
Sbjct: 243 LSETRHNKLQHI----TSIARIAEDAYVWMDRFTVRNLELYASTSFNA--ITLLDVIDKT 296
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
++ G RLL+RW+ PL + I R + V+ + H E+
Sbjct: 297 ISPMGGRLLKRWLALPLKNSQQIKQRHEVVNFLL--------------HQEEE------- 335
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDG 553
L + + DI+R I+++ +P E I + ++ + KQ+ +
Sbjct: 336 ------LGKIQQHIRHISDIERLISKVATGKISPREVIQLKNSLEAIVPIKQITSKSTNE 389
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
KV T+H L R +K+ T+N+EA ++L I++G
Sbjct: 390 AL--KVIGDTIHECELLR--------------SKIKETLNEEAP--VNILKGNAIASGYS 431
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWA 671
++ R S K+ LD ++ + G+ +L+ S + + IE+ K VP W
Sbjct: 432 DKLDELRGIAFSGKDYLDKMLERECEATGIPSLKIASNNVFGYYIEVRNTHKAKVPETWT 491
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY + E+ ++ A E++ + + + + Y Q +
Sbjct: 492 RKQTLVNAERYITEELKEYETKILGAEEKIMQIEQELFADLVVWINQYIKAVQQNANIIG 551
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHA 789
LDCL ATL++ N+ P +DD + I +GRHPV++ L ++++ ND L
Sbjct: 552 KLDCLCGFATLAKANNYSYPK-IDD--SFDLEIKNGRHPVIEKQLPIGESYIANDVYLDR 608
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA SA + ++D I+TR+GASD+I
Sbjct: 609 NTQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPADSARIGLVDKIFTRVGASDNIS 668
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMV 908
G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL EH +
Sbjct: 669 MGESTFMVEMNETASILNNISERSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPSRAKT 728
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ ++ T+ + Y+VS + +V +L K+V G SE SF
Sbjct: 729 LFATHYHELNEM-TEIFDRIKNYNVSV-----------KELKDNVLFLRKLVKGGSEHSF 776
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
G VA++A +P I +A I +LE SS
Sbjct: 777 GIHVAKMAGMPQQVIHKANKILKRLEKSHSS 807
>gi|401626342|gb|EJS44294.1| msh6p [Saccharomyces arboricola H-6]
Length = 1247
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 260/1040 (25%), Positives = 445/1040 (42%), Gaps = 137/1040 (13%)
Query: 3 KQKQQVISRFFAPKSNQTTASSSASSPRPPQ-----QTPPPKIAATVS----FSPAKRKV 53
K+K S +P + + +SS RP Q TPP + S F+ +
Sbjct: 222 KRKTSNTSYSSSPFTKSISQNSSRGGSRPKQVQRKSYTPPHSQKSATSKSSKFNKQNEER 281
Query: 54 VSSLFPPK-TPKKPKLSP-HTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIE 111
L + ++PK P + + PSS K+TP E+Q E+K+K D ++ +
Sbjct: 282 YQWLVDERDAQRRPKNDPEYDQRTLYIPSSAWN---KFTPFEKQYWEIKSKMWDCIVFFK 338
Query: 112 VGYKFRFFGEDAEMAAKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQ 169
G F + +DA +A + L I N A IP + + G+KV V Q
Sbjct: 339 KGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWASQFIQMGYKVAKVDQ 398
Query: 170 TETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN- 228
E+ K G G R L + T TL G+ + Y + + ++ GN
Sbjct: 399 RESMLAKEMREGSKGIVKRELQCILTSGTL------TDGDMLHSDLATYCLAIREEPGNY 452
Query: 229 -----------VGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLS 277
K+ +FG F ++ +TG++ EF D + L+ ++
Sbjct: 453 YNQTELDSVTMAKKLNTKIFGAAF--------IDTATGELRMLEFEDDSECTKLDTLMSQ 504
Query: 278 LSPAELLLGQP-LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSL----YEN 332
+ P E+++ + LS K++ + P + + + +E++S E
Sbjct: 505 VRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKGGGEFYDSDKTYSEIISSEYFPTEA 564
Query: 333 MGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL-TIRHLKQFGLERIMCLG 391
D L N + V SA G++ +L ++++++++
Sbjct: 565 DWPDVLKNYHETGKKV-----GFSAFGGLLYYLKWLKLDESLISMKNIEEYNF------- 612
Query: 392 ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHP 451
+ M L TLQ LE+ N+ +GS+ GTL + N +T G R++++W+ HP
Sbjct: 613 -----VKSQNSMILDGITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGKRMMKKWLMHP 667
Query: 452 LCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGR 511
L ++ I RLD+V + + D+ + E + + +
Sbjct: 668 LLHKDDIENRLDSVDSLLQ-------------------DIALRE--------ELEMTFSK 700
Query: 512 SPDIQRGITRIFHRTATPSEF---IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSAL 568
PD++R + RI RT +F I + I+ L+ + G+ + V+S
Sbjct: 701 LPDLERMLARIHSRTIKVKDFEKVITAFETIVQLQSSLEDNALKGDVSKYVSS------F 754
Query: 569 LKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKE 628
K L+ + + K A D+ N+++ G E ++ +Q ++
Sbjct: 755 PKELVECVENWTNAFQRQK--------AIDE----NIIVPQRGFDIEFDKSLDKIQELED 802
Query: 629 ELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPE 686
+L ++ RKQ N+++ + +E+P + VP NW ++ + K RY+S E
Sbjct: 803 KLMEILMSYRKQFKCSNIQYKDSGKEIYTVEIPVSVTKNVPSNWIQMAANKSYKRYYSDE 862
Query: 687 VLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE-FQAAVQALAALDCLHALATLSRN 745
V +A A E + + ++F +Y + +QA++ +DCL ++ S +
Sbjct: 863 VRALARSMAEAKELHKTLEEDLKNRLCQKFDAHYNSIWMPTIQAISNIDCLLSITRTSES 922
Query: 746 KNF--VRPVFVDDHEPVQ-------IHICSGRHPV--LDTILLDNFVPNDTNLHAEREYC 794
RP +D+ +P ++ S RHP L +F+PND L E+
Sbjct: 923 LGAPSCRPTIIDEVDPKTNAKLNGYLNFKSLRHPCFNLGATTARDFIPNDIELGKEQPRL 982
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
++TG N GKS +R + IMAQ+G +VP SA L +D I TR+GA+D+I QG+ST
Sbjct: 983 GLLTGANAAGKSTVLRMACIAVIMAQLGCYVPCESAVLTPIDRIMTRLGANDNIMQGKST 1042
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F EL E IL T +SL++VDELGRG S+ DG AIA + L ++ H + + F THY
Sbjct: 1043 FFVELAETKKILDMATNRSLLVVDELGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHY 1102
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
+A + K V + +S L ++VT+LYK++ G SE SFG VA
Sbjct: 1103 GTLA-LSFKHHPQVRSLKMSILVDEVT---------RNVTFLYKMLEGQSEGSFGMHVAS 1152
Query: 975 LAQLPPSCISRATVIAAKLE 994
+ + I A + A LE
Sbjct: 1153 MCGISKDIIDNAQIAADNLE 1172
>gi|158320586|ref|YP_001513093.1| DNA mismatch repair protein MutS [Alkaliphilus oremlandii OhILAs]
gi|158140785|gb|ABW19097.1| DNA mismatch repair protein MutS [Alkaliphilus oremlandii OhILAs]
Length = 874
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 255/925 (27%), Positives = 441/925 (47%), Gaps = 133/925 (14%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTASIPTF 148
QQ +E+K +Y D L+ +G + F +DAE A++ L I L+ +P
Sbjct: 3 QQYMEIKNQYKDALMFFRLGDFYELFFDDAETASRELEITLTARDCGLESKAPMCGVPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
N ++ +LV+ G+KV + +Q E ++ G R + + T TL D
Sbjct: 63 AANGYIDKLVSKGYKVAICEQVEDPSVAK------GIVKRDVVRVITPGTLI---DTNLL 113
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
ED ++NYLV + G GF V+ISTG+++ E +
Sbjct: 114 EDK---KNNYLVS----------LYMSSLGCGFSY------VDISTGELLSTEIVGTSIE 154
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY-AGPASNVRVECASRDCFIGGGALAEVM 327
L + + P EL+ ++ +K+ + G + + + D +
Sbjct: 155 QNLIDEISKIEPNELIY---FVEEEDKIGTNFIEGIRKKLNIHISKYDPW---------- 201
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
E++ + N+ +N Q N + ++ L + A I +LK +R
Sbjct: 202 -----TFEESYAMNQIKN-----QFNILTVESLGFSLNHLGINATGALIHYLKSTQ-KRT 250
Query: 388 MCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRW 447
+ + + +M L +T + LE+ ++ G+LL I++ T T G R++R+W
Sbjct: 251 LSHINKINIYTFTEKMVLDISTRRNLELTETIRGKNKKGSLLWILDKTQTAMGGRMIRKW 310
Query: 448 VTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLT 507
+ PL + I+ RL+AV+ + KN + E +
Sbjct: 311 IEEPLLNIQNINRRLEAVATL------------------KNDILLRCELK---------E 343
Query: 508 SLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSA 567
SL + D++R +I +ATP + +A+ +++ + +++L + +S
Sbjct: 344 SLKQIYDLERLSGKIAFGSATPRDLVALKKSVAFL-PDIKKLF-----------ENENSG 391
Query: 568 LLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVARARKAV 623
LLK L+ + I A + S++ E + D G II G E+ A
Sbjct: 392 LLKELLNNIDTLEDI--QALIESSILDEPSISLKDGG------IIKEGYNDELDELYVAA 443
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFKV-PLNWAKVNSTKKTIR 681
+ K + L + + G+++L+ + IE+ +N + P N+ + + R
Sbjct: 444 REGKHWIAKLEQAEKDRTGIKSLKVGYNKIFGYYIEITKSNLHLAPENYIRKQTLANCER 503
Query: 682 YHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF---QAAVQALAALDCLHA 738
Y +PE L L+ L EE +I ++ F++ E Q +A+A LD L++
Sbjct: 504 YITPE-LKELEDKILGAEEKSIAIE--YEQFIEIRNMLLHEIERIQRTARAVAELDVLYS 560
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQII 797
A + N+V+P V+ E + I GRHPV++ +L +N F+ NDT ++ E E +I
Sbjct: 561 FAEAASENNYVKPT-VNSSETIDIK--EGRHPVVEKVLENNMFISNDTYINTEDEQLLMI 617
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS Y+RQVALI +MAQ+GSFVPA+SA + + D I+TR+GA+D + QG+STF+
Sbjct: 618 TGPNMAGKSTYMRQVALIILMAQIGSFVPATSATIGITDRIFTRVGANDDLSQGQSTFMV 677
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
E++E + I+ T +SL+IVDE+GRGTST DG++IA++T +Y+ + LF THY ++
Sbjct: 678 EMSEMATIVNLATKKSLLIVDEIGRGTSTFDGLSIAWSTAEYICQSLGSRTLFSTHYHEL 737
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
+ + G + ++KV+ D +DV +L+KVV G ++ S+G +VA+LA
Sbjct: 738 TKLSETYRG---------IKNYKVLVKEDK---EDVIFLHKVVKGNADRSYGIQVAKLAG 785
Query: 978 LPPSCISRATVIAAKLEAEVSSRVQ 1002
LP + I+RA+ I + LE E + Q
Sbjct: 786 LPAAIITRASHILSDLERESIQKEQ 810
>gi|395223337|ref|ZP_10403260.1| DNA mismatch repair protein MutS [Pontibacter sp. BAB1700]
gi|394452722|gb|EJF07928.1| DNA mismatch repair protein MutS [Pontibacter sp. BAB1700]
Length = 876
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 259/925 (28%), Positives = 423/925 (45%), Gaps = 138/925 (14%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNF 140
N TPL +Q +K K+P LL+ VG + FGEDA A+K+L I A
Sbjct: 6 NGTVTPLMKQYNAIKAKHPGALLLFRVGDFYETFGEDAVRASKILDIVLTKRGAGSSSET 65
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGPFGRGLSALYTKATL 199
A P L+ ++ +LV AG +V + Q E ++K G RG++ L T
Sbjct: 66 ALAGFPHHSLDTYLPKLVRAGERVAICDQLEDPKSVK-------GIVKRGVTELVTPG-- 116
Query: 200 EAAEDVGGGEDGCGGESN-YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
V + SN YL V + GK GV ++ISTG+ +
Sbjct: 117 -----VSFNDQVLEKRSNNYLAAV-----HFGK-----------TEAGVSFLDISTGEFI 155
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ + ++ +L SL+PAE+L + ++ E +Y GP + R F
Sbjct: 156 TAQGDKNYVGK----LLQSLAPAEVLFCK---REKETFFQSY-GP--DFRYYALEEWVFS 205
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
A SL + +L IEG+ + + + +
Sbjct: 206 YDFAYE---SLTRHFSTTSLKG---------------FGIEGMQE----GITSAGAILHY 243
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLE-VLRNNSNGSEYGTLLHIMNHTLT 437
L + I + A+ L + L T++ LE V N +G L+ I++ T T
Sbjct: 244 LSETHHHEISHI-ATISRLEEDKYVWLDRFTVRNLELVYPQNQDGV---PLIQILDQTTT 299
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G+RLL++WV PL D I RLD V E++ +H E
Sbjct: 300 PMGARLLKKWVVLPLKDVVQIKRRLDTV-------------EALTKHSE----------- 335
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+L + L + D++R I+++ R P E + + +A+ +Q + +
Sbjct: 336 ---LLDELYLHLKQINDLERLISKVAVRRVNPRELMQLAKAL----DAIQPI-------K 381
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
K+ + + AL+K A + + +L +QG+++N +G E+
Sbjct: 382 KMLAASGIPALVKLADQLAPCDGLREEIKNVLKPDAPMLTNQGNMIN-----DGVNEELD 436
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNS 675
RK S K+ L L + G+ +L+ + V G + KVP +W + +
Sbjct: 437 ELRKIAFSGKDYLAQLQQREVRNTGISSLKIAYNKVFGYYLEVTHAHKDKVPASWIRKQT 496
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY + E+ T +++ A E + + + ++ + + Y + Q + +A +DC
Sbjct: 497 LVNAERYITEELKTYEEKILNAEERIYTIEFSLFNELVLQAMDYVGQIQQNAKVIAVIDC 556
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L A A ++ N+V+P D H + I GRHPV++ L + +VPND L E +
Sbjct: 557 LSAFAGIAVAGNYVKPEVSDSH---VLDIKKGRHPVIEKQLPLGEEYVPNDIYLDNEEQQ 613
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS +RQ ALI +MAQ+G FVPA +A + ++D I+TR+GASD++ +G S
Sbjct: 614 VIIITGPNMAGKSALLRQTALIVLMAQIGCFVPAEAANIGIIDKIFTRVGASDNLSKGES 673
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFV 911
TF+ E+ E + IL N + +S+V++DE+GRGTST+DG++IA+A +++L H K LF
Sbjct: 674 TFMVEMTETASILNNLSDRSMVLMDEIGRGTSTYDGISIAWAIVEHLHNHPKFRAKTLFA 733
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ + T V ++VS ++ + ++ K+V G SE SFG
Sbjct: 734 THYHELNQLAEDLT-RVKNFNVSV-----------KETGGKILFMRKLVEGGSEHSFGIH 781
Query: 972 VAQLAQLPPSCISRATVIAAKLEAE 996
VAQ+A +P S + RA I LE E
Sbjct: 782 VAQMAGMPNSVVLRADEIMHHLEKE 806
>gi|163786474|ref|ZP_02180922.1| DNA mismatch repair protein [Flavobacteriales bacterium ALC-1]
gi|159878334|gb|EDP72390.1| DNA mismatch repair protein [Flavobacteriales bacterium ALC-1]
Length = 870
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 262/927 (28%), Positives = 439/927 (47%), Gaps = 139/927 (14%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
KK TPL +Q +K KYPD LL+ VG + FG DA A+K+L I A +
Sbjct: 6 KKVTPLMKQYNAIKVKYPDALLLFRVGDFYETFGSDAVKASKILDIILTKRGAGSESETE 65
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLE 200
A P LN ++ +LV AG +V + Q E P + RG++ L T
Sbjct: 66 LAGFPHHSLNTYLPKLVRAGERVAICDQLE-------DPKQTKTIVKRGVTELVTPG--- 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR-LGVVAVEISTGDVVY 259
V +D +SN +C V FD + +GV ++ISTG+ +
Sbjct: 116 ----VALNDDILHSKSNNFLCAVH----------------FDKKYIGVSFLDISTGEFLT 155
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
+ + ++ + +L + +P+E+L+ SKQ+ K G N D
Sbjct: 156 SQGDAEYI----DKLLQNFNPSEVLI----SKQSRKEFTETFG---NDFHTFYLEDWVFQ 204
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
E +L ++ TL +++ EG++ + + L+ T RH
Sbjct: 205 ADYANE--TLIKHFNTTTLKGFGIEDL-----------YEGVI-ASGVVLHYLSET-RHN 249
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
K LE I A+ ++ + + T++ LE+ NS + TL+++++ T++
Sbjct: 250 K---LEHI----ATISRIATDDYVWMDKFTIRNLELY--NSTNTNAVTLINVIDKTISAM 300
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G R L+RW+ PL + I R + V + ++ ESV Q ++ Q
Sbjct: 301 GGRTLKRWLALPLKHADKIKQRHEVVQYLLDN-------ESVLQKNQ---------GQIK 344
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDGEYRE 557
+I DI+R I++I +P E I + ++ + K + + D E
Sbjct: 345 HI-----------GDIERLISKIATTKVSPREVIQLKNSLEAIVPIKSIAE-SCDNEAL- 391
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
+V ++L++ L R K+ T+N+EA ++L I+ G E+
Sbjct: 392 RVLGESLNNCDLLR--------------EKIKQTLNEEAP--VNILKGNTIAEGFSQELD 435
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNS 675
R +S K+ LD+++ ++ G+ +L+ S + + IE+ + K VP W + +
Sbjct: 436 ELRGLSKSGKDYLDNMLQRESERTGITSLKIASNNVFGYYIEVRNSHKDKVPEEWVRKQT 495
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY + E+ ++ A E + + + + + + + Q Q + LDC
Sbjct: 496 LVNAERYITEELKEYEAKILGAEERILAIEQQLFVELVTWMHQFIIQVQQNAQLIGQLDC 555
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L A+L++ ++ P +DD + I GRHPV++ L + ++ ND L E +
Sbjct: 556 LCGFASLAKTNKYIYPQ-IDD--SFDLEIKDGRHPVIEKQLPLGEPYIANDVFLDRETQQ 612
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNM GKS +RQ ALI ++AQ+GSFVPA A + ++D I+TR+GASD+I G S
Sbjct: 613 IIMITGPNMSGKSAILRQTALIVLLAQIGSFVPARDARIGLVDKIFTRVGASDNISMGES 672
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLFVT 912
TF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL EH K LF T
Sbjct: 673 TFMVEMNETASILNNISQRSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPAKPKTLFAT 732
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ ++ F+ + ++VS + +V ++ K+V G SE SFG V
Sbjct: 733 HYHELNEMTETFS-RIKNFNVSV-----------KELKDNVLFVRKLVEGGSEHSFGIHV 780
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSS 999
A++A +P I RA I +KLE SS
Sbjct: 781 AKMAGMPQQVIRRANKILSKLEKSHSS 807
>gi|363731315|ref|XP_419359.3| PREDICTED: DNA mismatch repair protein Msh6 [Gallus gallus]
Length = 1345
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 261/972 (26%), Positives = 448/972 (46%), Gaps = 109/972 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP ++ +LK++ D ++ +VG + + DA LG+ + ++ + P
Sbjct: 392 KCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVTGVNELGLI-FMKGSWAHSGFPE 450
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAI-------KAHGPGKAGPFGRGLSALYTKATLE 200
LV G+K+ V+QTET + AH R + + TK T
Sbjct: 451 TAFGRFSAILVQKGYKIARVEQTETPEMMEARCKATAHTTKFDKVVRREICRIITKGTQT 510
Query: 201 -AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
+ D E+ + YL+CV + + + G+ V+G V V+ S G
Sbjct: 511 YSIIDCDPTEN----HNKYLLCVKEKEDSSGQ---RVYG--------VCFVDTSVGKFYV 555
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
G+F+D S ++ +P ++L + L+ T+K+L + C
Sbjct: 556 GQFSDDRHCSRFRTLVAHYTPVQVLFEKGNLTVDTQKIL-------KGSLISCIQEGLIS 608
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMD--VPEQGNHRSAIEGIMNMPD---------- 366
G + +L + E+ N++ +P S I+ + + D
Sbjct: 609 GSQFWSASKTLKVLLEEEYFKENQNTESGCVLP------SVIKSLTSESDSLGLTPGENS 662
Query: 367 -LAVQALALTIRHLKQFGLERIMCLGASF-----------RSLSGS-------MEMTLSA 407
LA+ AL + +LK+ +++ + A+F +++S S M L
Sbjct: 663 ELALSALGGIVFYLKKCLIDQELLSLANFEKYIPVDADNAKTVSSSNFFARTDRRMVLDG 722
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
TL LEVL+N +NG+ GTLL ++ T +G RLL++W+ PLC+ I+ RLDAV +
Sbjct: 723 VTLMNLEVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPTSINDRLDAVED 782
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
+ + + +H +K D+ + + + I S + + PD R I +
Sbjct: 783 L---LAVPAKLTEITEHLKKLPDLERLLSKIHSIGSPLKSQ--NHPD-SRAI--FYEEIK 834
Query: 528 TPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK 587
+ IA + L K + ++ +D E+V S S +LK+L+ T + G+
Sbjct: 835 YSKKKIADFLSALEGFKVMNEI-VDA--MEEVASD-FKSQVLKQLV-TRKAKHPDGRFPD 889
Query: 588 LLSTVNK--EAADQGDLLNLMIIS--NGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
L + + + A D +I+ G + +A + +++ +E+ + ++ RK LG+
Sbjct: 890 LSAELKRWDTAFDHNQARKTGVITPKAGFDPDYDKALQDIKTVEEDFRTYLDKQRKLLGL 949
Query: 644 RNLEFMSVSGITHLIELP---ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
+++ + + +E+P + +P + ++ K RY + E+ L +L A E
Sbjct: 950 KSVLYWGTGKNRYQMEIPETATSRNLPEEYELKSTRKGYKRYWTKEIEKMLAELINAEER 1009
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVFV--DD 756
+ F ++Q AVQ +A LD L +LA S++ + RPV + D
Sbjct: 1010 RDAALKDCMRRLFYNFDKNSQDWQTAVQCIAVLDVLMSLANYSQDGDGPLCRPVILLPVD 1069
Query: 757 HEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAERE------YCQIITGPNMGGKSCYI 809
P + + + RHP + T D+F+PND + ++ E C ++TGPNMGGKS +
Sbjct: 1070 SAPPFLELKNARHPCITKTFFGDDFIPNDIVIGSKDEDGGSEASCVLVTGPNMGGKSTLM 1129
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
RQ L+ IMAQ+G +VPA L +D ++TR+GASD I G STF EL+E S IL++
Sbjct: 1130 RQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHA 1189
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG 929
T SLV+VDELGRGT+T DG AIA A + L E+ KC LF THY + + ++GS
Sbjct: 1190 TEHSLVLVDELGRGTATFDGTAIASAVVRELAENIKCRTLFSTHYHSLVE---DYSGSAA 1246
Query: 930 TY--HVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
H++ + ++ P S + +T+LYK + G S+GF A+LA +P I +
Sbjct: 1247 VRLGHMACMVENESEDP----SQETITFLYKFIEGACPKSYGFNAARLADIPEEIIQKGH 1302
Query: 988 VIAAKLEAEVSS 999
A + E + S
Sbjct: 1303 RKAKEFEKKTMS 1314
>gi|167765541|ref|ZP_02437605.1| hypothetical protein CLOSS21_00035 [Clostridium sp. SS2/1]
gi|167712726|gb|EDS23305.1| DNA mismatch repair protein MutS [Clostridium sp. SS2/1]
Length = 875
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 248/935 (26%), Positives = 430/935 (45%), Gaps = 160/935 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ QQ +++K + D +L +G + F +DA A+K L G L+
Sbjct: 6 KLTPMMQQYMQIKEENKDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLEERAPM 65
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P ++ ++ +LV G+KVG+ +Q E P +A G R + + T T +
Sbjct: 66 CGVPYHAVDSYLNKLVEKGYKVGICEQVE-------DPSQAKGIVKREIVRIVTPGTNIS 118
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ + ++ NYL+C+ +DG+ G IS DV G+
Sbjct: 119 QQSLDDEKN------NYLMCIFANDGSYG---------------------ISFVDVTTGD 151
Query: 262 FNDGFLRS--GLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
F + S + + PAE++ C D F+
Sbjct: 152 FRTTAMDSLAKVRDEIFKFEPAEII--------------------------C--NDAFLI 183
Query: 320 GGA----LAEVMSLYENMGEDTLSNNEDQNMDVPEQ---GNHRSAIEGIMNMPD--LAVQ 370
G L + MS+ + E + E + Q GN G+++ P +A
Sbjct: 184 SGMDFDYLKDKMSIVISSIEPYHFDEEQAEERIKRQFKVGNLEGL--GLVDHPMGVIATG 241
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
AL + ++ L+ +M + A S M + +++ + LE+ + + G+LL
Sbjct: 242 ALLGYLHETQKSSLDHLMHIEA----YETSEFMIIDSSSRRNLELCETLRDKQKKGSLLW 297
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++ T T G+R+LR V PL D+ I R DAV+ + +D
Sbjct: 298 VLDKTKTAMGARMLRNMVEQPLVDKKKIEERYDAVTTL--------------------TD 337
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA------VMQAILYAGK 544
TIV + L+ + D++R +T++ ++TA P + IA ++ AI +
Sbjct: 338 QTIVREELREYLNPIY-------DLERLMTKVSYKTANPRDMIAFKTSLELLPAIKTVLE 390
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+ + + G + + +H+ L +I P I +
Sbjct: 391 ECKDPLLSGLREDLDPLEDIHNLLEDSII--EEPPLAIKEGG------------------ 430
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
II G ++ + ++A K+ L L R++ G++NL+ + +++ ++
Sbjct: 431 --IIKEGFKEDIDKLKRAKTEGKQWLMELEEREREKTGIKNLKIKFNKVFGYYLDVTNSY 488
Query: 665 K--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
K VP ++ + + + RY + E+ D + + + L + + + G
Sbjct: 489 KDLVPDHYIRKQTLANSERYTTEELNQLADTILGSEDRLYALEYETYVMIRETLAGEMER 548
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFV 781
+A +D L +LA ++ +FVRP + I I GRHPV++ ++ D F+
Sbjct: 549 ISRTANVIAQIDALASLAYVAERNHFVRPKL---NVRGTIDIKDGRHPVVEQVIPNDMFI 605
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
NDT L ++ IITGPNM GKS Y+RQVALI +MAQ+GSFVPA+ A + ++D I+TR
Sbjct: 606 SNDTYLDNKKNRVAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAAKANIGIVDRIFTR 665
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD + G+STF+ E++E + ILRN T SL+I+DE+GRGTST DG++IA+A ++Y+
Sbjct: 666 VGASDDLASGQSTFMVEMSEVANILRNATKNSLLILDEIGRGTSTFDGLSIAWAVVEYIS 725
Query: 902 EHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
K LF THY ++ T+ G + + H +Y + K G D+ +L K+
Sbjct: 726 NSKLLGAKTLFATHYHEL----TELEGKIDSVH-NYCIAVKEQG-------DDIVFLRKI 773
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
V G ++ S+G +VA+LA +P + I+RA IA +LE
Sbjct: 774 VKGGADKSYGVQVAKLAGVPDAVINRAKEIARELE 808
>gi|372222087|ref|ZP_09500508.1| DNA mismatch repair protein MutS [Mesoflavibacter zeaxanthinifaciens
S86]
Length = 860
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 268/978 (27%), Positives = 432/978 (44%), Gaps = 210/978 (21%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASIPTFR 149
QQ +KTK+PD LL+ VG + FGEDA AA++LGI +N A P
Sbjct: 2 QQYNAIKTKHPDALLLFRVGDFYETFGEDAIKAAQILGIVLTHRNNGGDQTELAGFPHHS 61
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDVGGG 208
LN ++ +LV AG +V + Q E P + RG++ L T V
Sbjct: 62 LNTYLPKLVKAGERVAICDQLE-------DPKQTKTIVKRGVTELVTPG-------VALN 107
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D +SN + V FG +LG+ ++ISTG
Sbjct: 108 DDILNAKSNNFLAAVH------------FGRK---KLGIAFLDISTG------------- 139
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMS 328
E L + + Q +K+L + GP + S+ C G
Sbjct: 140 -------------EFLTTEGSTAQIDKLLQNF-GPNEIL----ISKKCRKEFG------- 174
Query: 329 LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRHLKQFGLER 386
EN G + H +E + D + L L+ FG++
Sbjct: 175 --ENFGSNL----------------HTFLLEDWVFQVDYTQEKLNGHFKTNSLQGFGVDH 216
Query: 387 IMC----LGASFRSLSGSMEMTLS-ANTLQQLE----------VLRN----NSNGSEYGT 427
+ C GA LS + L + LQ++ +RN S+ T
Sbjct: 217 LQCGTIASGAILHYLSETQHKQLQHISKLQRIAEEEYVWMDRFTIRNLELYGSHNQNAVT 276
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL +++ T++ G R L+RW+ PL +++ I++RL+ V Y T K
Sbjct: 277 LLEVIDKTISPMGGRNLKRWLALPLKNKDKINSRLEVVD--------YLT---------K 319
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
N+ V L+ + + D++R I+++ P E + + ++
Sbjct: 320 NNTV----------LAQLRAHIKEMGDLERLISKVATGKINPKEVVQLKNSL-------- 361
Query: 548 QLHIDGEYREKVTSKTLHSAL--LKRLILTASSPAVIGKA----------AKLLSTVNKE 595
+AL +K+L + ++ PA++ K+ ST+++E
Sbjct: 362 ------------------AALVPIKKLCIASADPALLNFGQQIDPLPALFEKIGSTLSEE 403
Query: 596 AADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT 655
A Q + I+ G E+ R S+K+ LD ++ + G+ +L+ S +
Sbjct: 404 APVQ--ISKGETIAKGYSQELDELRALAFSSKDYLDQMLQRESEATGISSLKIASNNVFG 461
Query: 656 HLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
+ IE+ + K VP W + + RY + E+ ++ A E + + + + L
Sbjct: 462 YYIEVRNSHKSKVPAAWVRKQTLVNAERYITEELKEYEAKILGAEERILSLEQQLFSQLL 521
Query: 714 KEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD 773
Y + QA +A LDCL A L+ + +P + + I GRHPV++
Sbjct: 522 VWMQEYISPVQANAHLIAQLDCLGGFAQLATENKYNKPKITNTS---TLTIKEGRHPVIE 578
Query: 774 TILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
L ++++ ND +L+ E + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA AE
Sbjct: 579 KQLPLGESYITNDVHLNREDQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAEEAE 638
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
+ ++D I+TR+GASD+I G STF+ E+NE + IL N + SL+++DE+GRGTST+DG++
Sbjct: 639 IGLVDKIFTRVGASDNISMGESTFMVEMNETASILNNLSENSLILLDEIGRGTSTYDGIS 698
Query: 892 IAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
IA+A +YL EH K LF THY ++ D+ +F + Y+VS +
Sbjct: 699 IAWAITEYLHEHPSKAKTLFATHYHELNDMTNRF-NRIKNYNVSV-----------KELK 746
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
+V +L K+VPG SE SFG VA++A +P I +A I KLE + + SAK D
Sbjct: 747 DNVLFLRKLVPGGSEHSFGIHVAKMAGMPQQVILKANKILKKLEK--THATEENSAKID- 803
Query: 1011 LVKLSDQEQEAQENMPVS 1028
EAQ+ M +S
Sbjct: 804 ---------EAQDEMQLS 812
>gi|317131677|ref|YP_004090991.1| DNA mismatch repair protein MutS [Ethanoligenens harbinense YUAN-3]
gi|315469656|gb|ADU26260.1| DNA mismatch repair protein MutS [Ethanoligenens harbinense YUAN-3]
Length = 871
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 262/944 (27%), Positives = 420/944 (44%), Gaps = 179/944 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q + +K ++ D +L +G + F +DA +A++ L G LD
Sbjct: 5 TPMMRQYMAVKEQHKDEILFFRLGDFYEMFFDDARLASRELELTLTGKDCGLDERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ RLV G+KV + +Q E + G R + + T T
Sbjct: 65 VPYHSCENYIARLVEKGYKVAICEQAEDPKLAK------GLVKREIVRVVTPGT------ 112
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
V G +NYL V DG G VV ++STG+
Sbjct: 113 VIEGSMLDESRNNYLAAVCVRDGQAG----------------VVFADVSTGE-------- 148
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
+ A LL G+ L + L +A R+ GG+LA
Sbjct: 149 --------------AHATLLAGEELDVKLTGELGRFA-----------PREVLFNGGSLA 183
Query: 325 EVMSLYENMGEDTLSNNEDQNMD---------VPEQGNHRSAIEGIMNMPDLAVQALALT 375
++ E + L + Q + + Q A ++ + AV+AL
Sbjct: 184 --LAGVERFARERLGASVTQPQEEAFSPDVAPLCAQFGKPDAAALELDGKEPAVRALNAL 241
Query: 376 IRHLKQF---GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+ +L+Q GLER+ L S + M L +T + LE+ + GTLL ++
Sbjct: 242 LAYLRQTQITGLERLNQLDV----YSDAQFMRLDLSTRRNLELCETLRGREKRGTLLWVL 297
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+ T T G RLLR W+ PL I+ RL AV DE SD
Sbjct: 298 DRTKTAMGKRLLRAWIEQPLLHPGPITRRLAAV-------------------DELFSDAV 338
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
+ E V+ L D++R +TRI + TA E A+ + I +L L
Sbjct: 339 LRE--------DVMEILDGVHDLERLMTRIVYGTANARELRALAETI----GRLPGL--- 383
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM------ 606
+E+V +P A+LLS + + DL L+
Sbjct: 384 ---KERV------------------APC----KARLLSDIARNIDPLPDLFELITKAVEE 418
Query: 607 ----------IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
+I G +E+ R+ ++ K L + +++ G++NL+ +
Sbjct: 419 DPPVSVREGGLIRPGYHAEIDSLREIMRGGKGFLAEVEAREKEKTGIKNLKIGYNRVFGY 478
Query: 657 LIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
IE+ + +VP ++ + + RY + E+ ++ A E + + +D +
Sbjct: 479 YIEVTKSNIAQVPEDYIRKQTLTNCERYITQELKELEGRVLGAQERVVQLEYDVFDGVRR 538
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
+ Q+ ALA LD L + A + + RP D +I I GRHPV++
Sbjct: 539 QVAEQLHRIQSTAGALAGLDVLCSFAQAAAMNRYCRPDLGVDG---RISIKDGRHPVVEA 595
Query: 775 ILLD-NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
IL FVPNDT L + + IITGPNM GKS Y+RQVALI +MAQ+GSFVPAS+A +
Sbjct: 596 ILSGVPFVPNDTELDMDGDRVAIITGPNMAGKSTYMRQVALITLMAQIGSFVPASAAHIG 655
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
V+D I+TR+GASD + G+STF+ E+ E + IL N T SLV++DE+GRGTST DG++IA
Sbjct: 656 VVDSIFTRVGASDDLASGQSTFMVEMTEVASILENATQNSLVLLDEIGRGTSTFDGMSIA 715
Query: 894 YATLDYLLEHKKC--MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
A ++++ + K+C LF THY ++ ++ + +G V Y V+ K +
Sbjct: 716 RAVVEHVADLKRCGAKTLFATHYHELTVLEDQLSG-VRNYSVAV-----------KKHGE 763
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
++T+L +++PG ++ S+G +VA+LA +P ++RA I +LEA
Sbjct: 764 ELTFLRRIIPGGADDSYGIEVAKLAGIPARVVTRAREILRELEA 807
>gi|330504209|ref|YP_004381078.1| DNA mismatch repair protein MutS [Pseudomonas mendocina NK-01]
gi|328918495|gb|AEB59326.1| DNA mismatch repair protein MutS [Pseudomonas mendocina NK-01]
Length = 855
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 275/927 (29%), Positives = 423/927 (45%), Gaps = 157/927 (16%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
+TP+ QQ +LK ++PD L+ +G + F EDA+ AAK+L I SIP
Sbjct: 7 HTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMC 66
Query: 149 RLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+ H + +LV G V + +Q A GP R + + T T+
Sbjct: 67 GIPFHSVEGYLAKLVKLGESVVICEQIGDPATSK------GPVERQVVRIITPGTISDEA 120
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRL-GVVAVEISTGDVVYGEF 262
+ D N L V+ D+ RL G+ ++I++G E
Sbjct: 121 LLDEHRD------NLLAAVLGDE-----------------RLFGLAVLDITSGRFSVQEI 157
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA-SRDCFIGGG 321
N G+ L A L L+PAELL+ + L A S R RD
Sbjct: 158 N-GW--ENLLAELERLNPAELLI----PDDWPQGLPAEKRKGSRRRAPWDFDRD------ 204
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ SL + G L +N+ + AI + A + + HL+
Sbjct: 205 --SAFKSLCQQFGTQDLKGFGCENLTL--------AIGAAGCLLSYAKETQRTALPHLRS 254
Query: 382 FGLER----IMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
ER ++ GAS R+L +L++ N G TL +M+ T
Sbjct: 255 LRHERLDDTVILDGASRRNL--------------ELDI---NLAGGRDNTLQSVMDRCQT 297
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
SRLL RW+ PL DR ++ AR DA++ + + YR ++PQ
Sbjct: 298 AMASRLLGRWLNRPLRDRAVLEARQDAIACL---LDGYR--------------FETLQPQ 340
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ--LHIDGEY 555
L +G D++R + RI R A P + +A ++ L A +LQQ +D +
Sbjct: 341 --------LKEIG---DLERILARIGLRNARPRD-LARLRDALAALPELQQEMASLDTPH 388
Query: 556 REKVTSKTLHSALLKRLILTA---SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+++ + L L+ A + PAVI L + + E D L M + GQ
Sbjct: 389 LQQLATTIATYPELAELLARAIIDNPPAVIRDGGVLKTGYDAEL----DELQAMSENAGQ 444
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN--FKVPL 668
F AR+ ++ G+ NL+ + V G + IELP P
Sbjct: 445 FLMDLEAREKART----------------GLANLKVGYNRVHG--YFIELPTKQAESAPA 486
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
++ + + K R+ +PE+ D+ A + +D L++ G+ A Q +
Sbjct: 487 DYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYDELLEKLIGHLAPLQDSAA 546
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLH 788
ALA LD L LA + N + RP FVD EP + I GRHPV++ +L FV ND +L
Sbjct: 547 ALAELDVLSNLAERALNLDLNRPRFVD--EPC-MRINQGRHPVVEQVLTTPFVANDLDLD 603
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA++ EL ++D I+TR+G+SD +
Sbjct: 604 DHRRML-IITGPNMGGKSTYMRQTALIVLLAHIGSFVPAAACELSLVDRIFTRIGSSDDL 662
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
GRSTF+ E++E + IL N + +SLV++DE+GRGTST DG+++A++ ++ L +
Sbjct: 663 AGGRSTFMVEMSETANILHNASERSLVLMDEVGRGTSTFDGLSLAWSAAEH-LARLRAFT 721
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ + + V H+S T H ++ + +L+ V PG + S+
Sbjct: 722 LFATHYFELT-VLPESEPVVANVHLSA-TEH----------NERIVFLHHVQPGPASQSY 769
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEA 995
G VAQLA +P + ISRA A+LEA
Sbjct: 770 GLAVAQLAGVPGTVISRAREHLARLEA 796
>gi|227894650|ref|ZP_04012455.1| MutS protein [Lactobacillus ultunensis DSM 16047]
gi|227863545|gb|EEJ70966.1| MutS protein [Lactobacillus ultunensis DSM 16047]
Length = 866
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 269/985 (27%), Positives = 444/985 (45%), Gaps = 170/985 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TP+ +Q E+K +YPD L VG + F +DA A++L + N A
Sbjct: 7 TPMMEQYYEIKKQYPDAFLFYRVGDFYELFEDDAVKGAQILELTLTHRSNKTKNPIPMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P ++ +V LV G+KV + +Q E P KA G RG+ L T T+ +
Sbjct: 67 VPHLAVDTYVNTLVEKGYKVALCEQLE-------DPKKAKGMVKRGIIQLVTPGTMMSE- 118
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
G D +SNYL VV VFG ++ D+ GE
Sbjct: 119 ---GPNDA--KDSNYLTSVV--------TTKSVFG-------------LAYSDLSTGEIY 152
Query: 264 DGFLRSGLEAV---LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
L+S EAV LLSL E++ PL++Q + + +N+ V S I G
Sbjct: 153 ATHLKS-FEAVSNELLSLRTREVVYNGPLTEQNKDFM-----HKANITV---SEPTPIEG 203
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
AE+ + +N+ +++ E + + ++ HL+
Sbjct: 204 EH-AEISYVEQNL-------------------TNKAEKEATKQLVGYLLSTQKRSLAHLQ 243
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+S + + +S LE++ + G + G+L +++ T T G
Sbjct: 244 ------------IAKSYEVNQYLQMSHTVQNNLELIASAKTGKKMGSLFWVLDKTHTAMG 291
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL++W+ PL + + I+ R + V + + Y+
Sbjct: 292 GRLLKQWLARPLLNVDEINHREEMVQALLDG---------------------------YF 324
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHIDGEYRE 557
+ + +L D++R RI E + + +QA+ L Q D + E
Sbjct: 325 TRENAIDALKGVYDLERLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQ--SDSDVLE 382
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
K + +I T + K LL+T +G L I +G ++
Sbjct: 383 DFAKKIDPLKGVAEMIST-----TLVKDPPLLTT-------EGGL-----IRDGVDKQLD 425
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLN-WAKVN 674
R R A+ + K+ L + R++ G+ NL+ + V G + KVPL+ + +
Sbjct: 426 RYRDAMNNGKKWLAQMEADERQKTGIENLKVGYNKVFGYYIQVSNGNKSKVPLDRYTRKQ 485
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGGYYAEFQAAVQALA 731
+ RY +PE L + L L E T +D F+K E Y Q LA
Sbjct: 486 TLTNAERYITPE-LKEHENLIL--EAQTRSTDLEYDLFVKLREEVKKYIPALQKLGSQLA 542
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAE 790
ALD AT++ N+ RP F D++ I + +GRHPV++ ++ +++PND +
Sbjct: 543 ALDVYCGFATVAEQNNYCRPHFHTDNQ--DIDVVNGRHPVVEKVMTAGSYIPNDVKMDTG 600
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ +ITGPNM GKS Y+RQ+ALI IMAQ+GSFVPA SA+L V D I+TR+GA+D +
Sbjct: 601 TDIF-LITGPNMSGKSTYMRQMALIAIMAQIGSFVPADSADLPVFDQIFTRIGAADDLIS 659
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ E++EA+ L+ T +SLV+ DE+GRGT+T+DG+A+A A + YL + LF
Sbjct: 660 GQSTFMVEMSEANDALQYATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKALF 719
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ D+ + HV ++ + + +L+K++PG ++ S+G
Sbjct: 720 ATHYHELTDLDETL-DHLKNIHVGA-----------TEENGKLIFLHKILPGPADQSYGI 767
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL---VKLSDQEQEAQENMPV 1027
VAQLA LP + + AT + +LEA+ S + S + DL V+ +D E++ Q + P
Sbjct: 768 HVAQLAGLPRAVLREATKLLKRLEAQ-GSELAPVSQQLDLFAEPVENTDNEEQTQNDKPA 826
Query: 1028 SPESFYLGRVEASEDLISAYRDLFL 1052
+A +D++ +L+L
Sbjct: 827 I--------TDAEQDVLDDISNLYL 843
>gi|153954199|ref|YP_001394964.1| DNA mismatch repair protein MutS [Clostridium kluyveri DSM 555]
gi|219854807|ref|YP_002471929.1| hypothetical protein CKR_1464 [Clostridium kluyveri NBRC 12016]
gi|189030764|sp|A5N8I5.1|MUTS_CLOK5 RecName: Full=DNA mismatch repair protein MutS
gi|254766624|sp|B9E1Z0.1|MUTS_CLOK1 RecName: Full=DNA mismatch repair protein MutS
gi|146347080|gb|EDK33616.1| MutS [Clostridium kluyveri DSM 555]
gi|219568531|dbj|BAH06515.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 871
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 253/933 (27%), Positives = 424/933 (45%), Gaps = 159/933 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +E+K Y D +L +G + F +DA++AA L + L
Sbjct: 4 TPMMRQYMEIKENYKDCILFFRLGDFYEMFFDDAKIAAAELELVLTARECGLKEKAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
IP ++ R+VN G+K+ + +Q E A G RG+ + T T +
Sbjct: 64 IPYHAAKSYIGRMVNKGYKIAICEQLEDPA------QSKGIVKRGIIKVITPGTYMDSYF 117
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ E+ NY++C+ ++ N G F D ISTG EFN
Sbjct: 118 LDENEN------NYIMCLYINN-NEGSNCALCFAD------------ISTG-----EFNC 153
Query: 265 GFLRSGLEAVL---LSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L +L +P E+++ + + + ++ + EC
Sbjct: 154 TDTPFNLSVILDEICKFNPREIIIQEDIDSNILQGIVEVFNETFSRVDEC---------- 203
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
Y GE+ L +Q D+ N R I+ AL I+H ++
Sbjct: 204 --------YFQKGEEVL---REQFKDL----NLREYTPEIIKCGG----ALVKYIKHTQK 244
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L I F+ + +T+ N+ + LE++ + + G+LL +++ T T G
Sbjct: 245 TNLSHI----NKFQYYNIVDYLTIDINSKRNLEIVESLRESKKKGSLLGVIDKTNTSMGG 300
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESM-----------GSYRTSESVGQHDEKNSD 490
R LR+W+ PL DRN I RLD+V EI ++ Y G+ K+ +
Sbjct: 301 RQLRKWIEQPLIDRNKIMERLDSVEEILNNICYHEDLKEALKNIYDIERLAGKISSKSVN 360
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
L+S+ +S+ + PDI+ S F + +Y K L +L
Sbjct: 361 AKE--------LNSLKSSIEKIPDIK----------VILSNFETSLLKNMY--KNLDEL- 399
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN 610
K ++ LL + IL +P+V + +G+L I
Sbjct: 400 -----------KDIY-MLLDKAIL--DNPSV--------------SLKEGNL-----IKE 426
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA---NFKVP 667
G SE+ R ++A K+ + SL + R+ +++L+ + IE+ N
Sbjct: 427 GYDSEIDRLKEAKVKGKDWIASLESSERELTKIKSLKIGYNKVFGYYIEVTKSNLNLVPE 486
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+ + + RY +PE+ D++ A E+L + A+ + Q +
Sbjct: 487 HRYIRKQTLSNAERYITPELKEMEDKILGAEEKLIYLEYNAFVEVRDKVEKEVTRIQNSA 546
Query: 728 QALAALDCLHALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDT 785
+ ++ +DCL +LA + N+ +P + + D +++I GRHPV++ +L FV NDT
Sbjct: 547 RIISEVDCLTSLARAALENNYCKPEITLSD----RVYIEEGRHPVVENMLSTGEFVSNDT 602
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
++ +ITGPNM GKS Y+RQVAL+ IMAQ+GSFVPA SA + + D I+TR+GAS
Sbjct: 603 DIDTGENQLLLITGPNMAGKSTYMRQVALVTIMAQIGSFVPAKSASISICDKIFTRIGAS 662
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D + G+STF+ E+ E S IL+N T +SL+++DE+GRGTST+DG++IA++ ++Y+ K
Sbjct: 663 DDLASGKSTFMVEMWEVSNILKNATNKSLILLDEVGRGTSTYDGLSIAWSVIEYICRESK 722
Query: 906 --CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
C LF THY ++ ++ K G V Y VS + + ++ +L K++ G
Sbjct: 723 LRCKTLFATHYHELTKLEGKIKG-VKNYCVSV-----------KEVENNIVFLRKIIRGG 770
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
++ S+G +VA+LA LP + RA I LE E
Sbjct: 771 ADQSYGIEVAKLAGLPEEVLKRAREILNSLETE 803
>gi|255013135|ref|ZP_05285261.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_7]
gi|410102598|ref|ZP_11297524.1| DNA mismatch repair protein mutS [Parabacteroides sp. D25]
gi|409238670|gb|EKN31461.1| DNA mismatch repair protein mutS [Parabacteroides sp. D25]
Length = 869
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 254/925 (27%), Positives = 429/925 (46%), Gaps = 146/925 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH-----LDHNFMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA + A++LGI + + A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVIGAEILGIVQTKRANGVGQHVEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + V G F ++ISTG+ + E +
Sbjct: 120 ILNHK-----ENNFLASI--------HFAKEVCGISF--------LDISTGEFMTAEGSI 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ A + R D +I
Sbjct: 159 DYI----DKLLNNFSPKEVLIERGNKKRFEE--------AFDPRFFIFELDDWIF----- 201
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
T S ED+ + E N + G+ ++ L + A + +L Q
Sbjct: 202 ------------TTSAAEDRLLKHFETKNLKGF--GVQHL-KLGIIASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I + A R + + L T++ LE++ + E +LL +++ T++ GSR+L
Sbjct: 247 THISHITALSR-IEEDRYVRLDKFTVRSLELV--GTMNDEGTSLLDVIDKTISPMGSRML 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
RRW+ PL D I R + V D EP+ +L +
Sbjct: 304 RRWILFPLKDVKPIQERQEVV------------------------DYFFREPETKELLDT 339
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
L +G D++R I+++ +P E + + A+ + GE + L
Sbjct: 340 QLEQIG---DLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACMASGEPSLCRIGEQL 396
Query: 565 HS-ALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
++ AL++ I + P+++ K + VN+E D R
Sbjct: 397 NACALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDD--------------------LR 436
Query: 621 KAVQSAKEELDSLINMCRKQL---GMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNS 675
S K D L+ + ++++ G+ +L+ F +V G + KVP NW + +
Sbjct: 437 AIAYSGK---DYLLKVQQREIELTGIPSLKIAFNNVFGYYIEVRNTHKDKVPANWIRKQT 493
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY + E+ +++ A E+ + ++ + Y Q + +DC
Sbjct: 494 LVNAERYITEELKEYEEKILGAEEKSLALETRLFNELVLALTEYIPPIQMNANLIGRIDC 553
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L + A + ++RP+ D +I I GRHPV++ L + ++ ND L E++
Sbjct: 554 LLSFAKAAEANKYIRPIVSDSD---KIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQ 610
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS +RQ ALI +MAQ+G FVPA SA + ++D I+TR+GASD+I G S
Sbjct: 611 IIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGES 670
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFV 911
TF+ E+NEAS IL N T++SLV+ DELGRGTST+DG++IA+A ++Y+ EH K LF
Sbjct: 671 TFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFA 730
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ F + Y+VS K +G V +L K++PG SE SFG
Sbjct: 731 THYHELNEMERAFK-RIKNYNVSV----KEVG-------NKVIFLRKLIPGGSEHSFGIH 778
Query: 972 VAQLAQLPPSCISRATVIAAKLEAE 996
VA++A +P S + R+ I +LE+E
Sbjct: 779 VAKMAGMPKSIVKRSNEILKQLESE 803
>gi|42518561|ref|NP_964491.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
gi|48428289|sp|P61668.1|MUTS_LACJO RecName: Full=DNA mismatch repair protein MutS
gi|41582846|gb|AAS08457.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
Length = 857
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 250/948 (26%), Positives = 418/948 (44%), Gaps = 164/948 (17%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
K TP+ +Q E+K +YPD L VG + F +DA A++L + N
Sbjct: 4 KDTTPMMKQYYEIKEQYPDAFLFYRVGDFYELFEDDAIKGAQILELTLTHRSNKTKNPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ +V LV G+KV + +Q E P KA G RG+ L T T+
Sbjct: 64 MAGVPHLAVDTYVNTLVEKGYKVALCEQLE-------DPKKAKGMVKRGIIQLITPGTM- 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E +D SNYL V+ + GF G+ ++STG+
Sbjct: 116 MQERPDQAKD-----SNYLTSVISTNS------------GF----GLAYSDLSTGETFST 154
Query: 261 EFNDGFLRSGLEAV---LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
D EAV LLSL E++ L+ K L A + VE
Sbjct: 155 HLAD------FEAVANELLSLQTREVVYNGHLT-DLNKDFLKKANITVSEPVEVE----- 202
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
G AE+ + +N+ +D + I+ + + ++
Sbjct: 203 ---GEHAEISYVAQNLTDD-------------------AEIKATKQLVAYLLSTQKRSLA 240
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
HL+ +S + + +S LE++++ + G+L +++ T T
Sbjct: 241 HLQ------------VAQSYEPTQYLQMSHTVQTNLELIKSAKTSKKMGSLFWLLDKTST 288
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G RLL+ W+ PL I+ R + V + +
Sbjct: 289 AMGGRLLKSWIERPLLSVTEITRRQEMVQALLDD-------------------------- 322
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA------ILYAGKQLQQLHI 551
Y+ V+ SL D++R RI + E + + + IL A + H+
Sbjct: 323 -YFTREKVIDSLKGVYDLERLTGRIAFGSVNAREMLQLAHSLGAIPEILNALLETNNPHL 381
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
++ K +H ++ ++ P G +I G
Sbjct: 382 QNFAKQIDPLKGIHDLIVNTIVDNPPLPTTEGG----------------------LIREG 419
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLN 669
++ R R A+ + K+ L + + R+ G+ NL+ + IE+ + KVP +
Sbjct: 420 VSEQLDRYRDAMNNGKKWLSEMESHEREVTGINNLKVGYNKVFGYYIEVTNSNKSKVPTD 479
Query: 670 -WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGGYYAEFQA 725
+ + + RY +P++ + AL E +D F+K + Y Q
Sbjct: 480 RYTRKQTLTNAERYITPDLK---EHEALILEAEAKSTGLEYDLFVKLREDVKKYIPALQK 536
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPND 784
+ +A+LD L AT+S N+VRP FV D + +I++ +GRHPV++ ++ +++PND
Sbjct: 537 LAKQIASLDVLTNFATVSEQNNYVRPNFVTDKQ--EINVVNGRHPVVEQVMTAGSYIPND 594
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
+ + +ITGPNM GKS Y+RQ+ALI IMAQ+GSFVPA SA L + D I+TR+GA
Sbjct: 595 VKMDQDTNIF-LITGPNMSGKSTYMRQMALIAIMAQIGSFVPADSATLPIFDQIFTRIGA 653
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D + G+STF+ E++EA+ L++ T +SLV+ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 654 ADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKV 713
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
LF THY ++ D+ + HV ++ + + +L+K++PG +
Sbjct: 714 GAKALFATHYHELTDLDQTLK-HLKNIHVGA-----------TEENGKLIFLHKILPGPA 761
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLV 1012
+ S+G VAQLA LP + AT + +LE + +S +Q S + DL V
Sbjct: 762 DQSYGIHVAQLAGLPHKVLREATTMLKRLEKQGASELQPASEQLDLFV 809
>gi|145220133|ref|YP_001130842.1| DNA mismatch repair protein MutS [Chlorobium phaeovibrioides DSM 265]
gi|189083175|sp|A4SFT1.1|MUTS_PROVI RecName: Full=DNA mismatch repair protein MutS
gi|145206297|gb|ABP37340.1| DNA mismatch repair protein MutS [Chlorobium phaeovibrioides DSM 265]
Length = 874
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 262/963 (27%), Positives = 437/963 (45%), Gaps = 158/963 (16%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASI 145
+K+ +P+ +Q +++K +Y D LL+ VG + F +DA + + I N I
Sbjct: 9 SKELSPMMRQYLDVKKQYADYLLLFRVGDFYETFFDDAATISAAVNIVLTRRSNGSAPDI 68
Query: 146 PTFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSAL------ 193
P H + RLV GFKV V +Q E P +A G R ++ +
Sbjct: 69 PMAGFPYHASEGYIARLVRKGFKVAVCEQVED-------PAEAKGIVKREITEIVTPGVT 121
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
Y+ + LE + NYL V +G G+ ++++
Sbjct: 122 YSDSILEDRHN------------NYLAAV------------AFLKEGRTPVAGIAYLDVT 157
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
T + LR +LSL PAELL+ + E ++ YA
Sbjct: 158 TAEFRIASLPPHSLRD----TILSLGPAELLVSSSEKSRLEDLVRGYAT----------- 202
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ-AL 372
G L G D +E+Q V + +++G + A + A
Sbjct: 203 -------GMLV--------TGLDDWMFSEEQAETVLSRQFRTHSLKGFGIEGNRAGRVAA 247
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+ +++L + R + + G MTL T + LE++ + +GS +G+LL +M
Sbjct: 248 GVVLQYLDETRQSRRAYI-TRISEMQGGEFMTLDLQTKRNLEIVSSMQDGSPHGSLLQVM 306
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+ T+ G+RL+RRW+ PL I+ R D V E+ +S S+++
Sbjct: 307 DRTVNPMGARLIRRWLQRPLRVAEAIAERHDGVEELLQS-----------------SELS 349
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
V SL D++R + RI +P E + + ++ L QL+ L
Sbjct: 350 ----------EGVRCSLSEINDLERSLARIATFRTSPREVLQMGRS-LAVFPQLRDL--- 395
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIISN 610
L AL RL S AV+ +L+S + + + + + I +
Sbjct: 396 -----------LLPALSARL---RSLAAVLQPLPELVSEIERSVDPECGATVRDGGYIRS 441
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVPL 668
G E+ R AKE L + R++ G+ +L+ + IE+ AN +VP
Sbjct: 442 GCNDELDELRSVSSMAKERLMDIQREEREKTGISSLKVQYNRVFGYYIEISRANLDRVPE 501
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA-WDSFLKEFGGYYAEFQAAV 727
+ K + RY P L A ++ L EE ++ A + + A Q +
Sbjct: 502 GYMKKQTLVNAERYTIP-ALKAYEEKILNAEERSLRLEAEIFQALCASIAERAASIQESA 560
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDT 785
A+A +D L + A ++ + +P + +HE + I GRHPVL+ I+ + FV ND
Sbjct: 561 LAIAEIDTLASFALSAKEYGYCKPE-MKEHEG--LLITEGRHPVLERIMKPDEPFVKNDC 617
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
+ ++ +ITGPNM GKS Y+RQ LI ++AQ GSFVPA AE+ ++D I+TR+GAS
Sbjct: 618 HFDGQQRML-MITGPNMAGKSSYLRQTGLIVLLAQAGSFVPAERAEIGMVDRIFTRVGAS 676
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D++ G STFL E+NEA+ IL N T+ SL+++DE+GRGTST DG++IA++ +Y++
Sbjct: 677 DNLASGESTFLVEMNEAASILNNATSSSLILLDEIGRGTSTFDGMSIAWSMSEYIITRLG 736
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++++++ + G V Y+ + + +S + V +L K+V G ++
Sbjct: 737 ARTLFATHYHELSELEERLPGVV-NYNATVV-----------ESGERVIFLRKIVRGSTD 784
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENM 1025
+S+G +VA++A +P I RA I + LE ++D V +D+ QENM
Sbjct: 785 NSYGIEVARMAGMPNEVIERAREIMSGLE------------RKD--VSFADRSFSVQENM 830
Query: 1026 PVS 1028
+S
Sbjct: 831 QIS 833
>gi|342218674|ref|ZP_08711282.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 135-E]
gi|341589370|gb|EGS32651.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 135-E]
Length = 865
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 241/921 (26%), Positives = 421/921 (45%), Gaps = 127/921 (13%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDH 138
T K TP+ +Q +E+K + D LL +G + F +DA A++ L G
Sbjct: 2 TEEVKLTPMMKQYLEVKKQCQDQLLFFRLGDFYEMFFDDAITASRELDLTLTGRAGGNKE 61
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
+P + ++ RLV G+KV + +Q E + G R + + T T
Sbjct: 62 KVPMCGVPFHSADTYIERLVQKGYKVAICEQMEDPKMTK------GIVKRQIIKVVTPGT 115
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ V ++ NY+ C++ GN+ + + E++TG+ +
Sbjct: 116 ITMEHAVAAKQN------NYIGCIMQQ-GNM---------------ISLALAEVTTGECM 153
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ + + L +L +P EL++ S Q ++ + V RD
Sbjct: 154 WMACSIKQMEEKLFDILSVYTPRELVIETMASSQQSRVKRFLETRDWSCTVTAIQRD--- 210
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
E++ +TL P + A+E P LA + + +++
Sbjct: 211 ------------ESIAYETL----------PVKYFSAQAVEK--AKPVLA--CIGVLLKY 244
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
+ I + ++ + ++ L A +L+ LEV +N +G GTLL +++HT T
Sbjct: 245 IADVMKSEISHMNLLI-AIDYTKQLVLDAASLRHLEVTQNVRDGGRKGTLLEVLDHTQTA 303
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLLR+W+ PL I+ R D+V+E+ + +
Sbjct: 304 MGGRLLRKWLESPLLSIGDITYRQDSVAELVQKVT------------------------- 338
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
+ ++ L R D +R +TRI T P + +A+ ++ L A ++Q + R
Sbjct: 339 --LRQDLVNILSRIFDFERILTRIEIGTVNPKDMVALRES-LAALPAIKQYLAQAQSR-- 393
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLST-VNKEAADQGDLL-NLMIISNGQFSEV 616
+LK+L A+ +V LL +N + G +L N +I +G +E+
Sbjct: 394 ---------MLKQL---ATQISVHDDMYTLLMRGIND---NPGTVLRNGGVIRSGFSAEL 438
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPANFKVPLNWAKVNS 675
R+ ++ L L R++ G++ + + V G I +P + + +
Sbjct: 439 DEIRRLAADSQTILQELEATERERTGIKMKIGYTKVFGYYFEISHANTKPIPDYYVRKQT 498
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY +P++ ++ A E + + A + + ++ A Q +ALA +DC
Sbjct: 499 LVNAERYITPDLKEFEVKVLTAQERMLALETALFATIREDLQQQIAAMQETARALAQVDC 558
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYC 794
L +LA ++ ++RP + I I GRHP+++ L FVPND L+
Sbjct: 559 LVSLAVAAQKYRYIRPQLNTER---TILIRDGRHPIIERFLKSEVFVPNDVQLNHNDHEI 615
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
++TGPNM GKS Y+RQVA++ +M Q+G+F+PA A + +D I+TR+GASD I G+ST
Sbjct: 616 LVLTGPNMAGKSTYMRQVAVLVLMTQIGAFIPAKEASICPVDRIFTRIGASDDILTGQST 675
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ E +YIL++ T SL+I DE+GRGTST DG++IA A ++Y+ + LF THY
Sbjct: 676 FMVEMKEVAYILKHATMNSLLIFDEIGRGTSTFDGMSIARAVIEYVESKVHALTLFATHY 735
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ D+ K T + Y V+ + +D+T+L +++ G ++ S+G VA+
Sbjct: 736 HELIDMSDK-TTKIKNYTVAV-----------KERGKDITFLRRIIAGGADRSYGLHVAR 783
Query: 975 LAQLPPSCISRATVIAAKLEA 995
LA +P S +SRA VI LEA
Sbjct: 784 LAGVPESLLSRAEVILKDLEA 804
>gi|312622277|ref|YP_004023890.1| DNA mismatch repair protein muts [Caldicellulosiruptor kronotskyensis
2002]
gi|312202744|gb|ADQ46071.1| DNA mismatch repair protein MutS [Caldicellulosiruptor kronotskyensis
2002]
Length = 863
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 249/948 (26%), Positives = 433/948 (45%), Gaps = 157/948 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +E+K K D +L +G + F EDA +A+K L I +
Sbjct: 5 TPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +L+ G+KV + +Q E + G R ++ + T T
Sbjct: 65 VPYHSATSYIAKLIEKGYKVAICEQVEDPKLAK------GIVKREITRIITPGTF----- 113
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+D +N++ C+ K R+ + V++STG E
Sbjct: 114 ---IDDNISTANNFICCI-------SKGRS---------EFALTFVDVSTG-----EMYS 149
Query: 265 GFLRSGLEAVLLSL---SPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L L+ ++ + SP+E+L+ E L + ++ CAS F+
Sbjct: 150 CLLEEDLQKLVNEIGKYSPSEILISN-----IEDELYEF------LKKNCAS---FVQMI 195
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++ YE + D+ + I + N+ ++ ++ ++++
Sbjct: 196 EFVDLQKCYEVIENQINVGKIDERL-----------ILSVGNLLKYLIETQKISFDYIRR 244
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ R+ + + NT + LE+ + S +LL I++ T T GS
Sbjct: 245 YEFYRVQNY------------LQIDINTKRNLELTESIIQRSRKNSLLGILDQTKTSMGS 292
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL D I+ RLD+V ++ + Y I
Sbjct: 293 RLLKKWIERPLIDVIEINRRLDSVEQLKSN---------------------------YSI 325
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDGEYREKV 559
L + L R DI+R ++ ++ + +++ ++I L A K+L
Sbjct: 326 LVQIEELLSRMYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLS----------- 374
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA---ADQGDLLNLMIISNGQFSEV 616
+ + LLK + + I A + S++N++A +G II +G EV
Sbjct: 375 ---SFSAQLLKEIYEGLDTLEDI--YALIDSSINEDAPVTLKEGG-----IIKDGFNEEV 424
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVN 674
R R +++KE L R G++NL + IE+ +N+ VP + +
Sbjct: 425 DRLRNISKNSKELLVQYEEKERNLTGIKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQ 484
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ D++ A+++L + + Q +A LD
Sbjct: 485 TLANAERYITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASNIAILD 544
Query: 735 CLHALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAERE 792
L + A ++ + +VRP V++ D +I+I +GRHPV++ ++ NF+PNDT L
Sbjct: 545 VLCSFARIAIDNEYVRPNVYLGD----RIYIKNGRHPVVEKMIGRGNFIPNDTELDQAEN 600
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS Y+RQVALI IMAQ+G FVPA A + V+D I++R+GASD I G+
Sbjct: 601 RVLIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAYIGVVDKIFSRIGASDDISSGQ 660
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLF 910
STF+ E++E + IL+N T +SL+I DE+GRGTST+DG++IA+A L+Y+ + K LF
Sbjct: 661 STFMVEMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLF 720
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFG 969
THY ++ +++ + G V Y V D K + +++ +L K+V G +SS+G
Sbjct: 721 ATHYHELTELEERIPG-VKNYRV------------DVKEEGKNIIFLRKIVRGGCDSSYG 767
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
VA+LA +P + RA I +LE +R R ++++ + ++Q
Sbjct: 768 IHVARLAGIPEEVLKRAEEILKQLEEADINRKNIRKLRKEIKKEFTEQ 815
>gi|217967464|ref|YP_002352970.1| DNA mismatch repair protein MutS [Dictyoglomus turgidum DSM 6724]
gi|217336563|gb|ACK42356.1| DNA mismatch repair protein MutS [Dictyoglomus turgidum DSM 6724]
Length = 853
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 241/939 (25%), Positives = 436/939 (46%), Gaps = 147/939 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH-----NFMTAS 144
TPL +Q +K ++ D +L+ +G + F EDA++ ++ L I A
Sbjct: 5 TPLYRQYKSIKDQFSDAILLFRLGDFYEAFEEDAKIISQELDIVLTSKEIGKGKRIPMAG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P L+ ++ +LV +KV + +Q E A+ G R + + T TL ED
Sbjct: 65 VPYHSLDSYLSKLVQKKYKVAICEQVEDPAL------AKGLVRREVVRVITPGTL--VED 116
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+++D N + ++ + L + +++STG+ E+
Sbjct: 117 ----------------TLLEDKNN--NFLSSIYALNREY-LALATIDVSTGEFFATEWRG 157
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
+ + L+ L P E++L P S + + S+++ E + +
Sbjct: 158 KDAEEIIYSELVRLKPKEIIL--PFS-----LKDLLSELLSDLKREVDPKITLLED---- 206
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
S +E + ++N + E+ +I G+++ + + I ++ +
Sbjct: 207 ---SYFEPSDHQISYSEPEENYPLAEK-----SINGVLSYIKEVMFTIPTHIERVEFYKP 258
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
++ + L ++ ++ LE+L G G+L+ +++ TLT G+RLL
Sbjct: 259 QQYLILDST---------------AIKHLELLETVREGQRRGSLIWVLDKTLTSMGARLL 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
++W+ PL + N I R +A+ E + R E +
Sbjct: 304 KKWLLQPLLNVNAIKKRQEAIKEFLDKDPWRREMEEI----------------------- 340
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY---AGKQLQQLHID--GEYREKV 559
L PD++R +RI + TATP E I + QA+ + K L++ + E +E +
Sbjct: 341 ----LKEMPDLERINSRINYNTATPKELIYLRQALSFLPLLRKSLEKAESNRLKELKENL 396
Query: 560 TS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
+ + L+ L + L+ S P+ I D G I +G +
Sbjct: 397 PNLEPLYEELDRALV--ESPPSHI--------------KDGG------YIKDGYDPNLDE 434
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNST 676
RK ++ +K+ L +L N R++ G+++L+ + IE+ AN VP ++ + +
Sbjct: 435 LRKLLRESKDWLINLENRERERTGIKSLKIGYNQVFGYYIEVTKANLNLVPSDYIRKQTL 494
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
R+ +PE+ +++ A + + + + + K+ + + Q +A +D
Sbjct: 495 VNAERFITPELKEWENKILHAEDNIKKIEEELFQNLRKKVIKHSKDITTFAQTIAEIDVY 554
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQ 795
+LA +R N+V P +D+E + I GRHPV++ +L FVPND L+ ++ +
Sbjct: 555 ISLAKAAREYNYVCPQITNDYEVI---IREGRHPVIERMLPPGTFVPNDAYLNKDK-FID 610
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNM GKS YIRQ+ALI I+AQ+GSF+PA A++ V+D I+TR+GA D I G STF
Sbjct: 611 LITGPNMAGKSTYIRQIALIIILAQMGSFIPAKEAKIGVVDRIFTRIGAWDDISSGESTF 670
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
L E+ E IL + T +SL+I+DE+GRGTST+DG++IA+A ++Y+ K LF THY
Sbjct: 671 LVEMKEVGNILSHATERSLIILDEVGRGTSTYDGISIAWAIVEYIHNKIKAKTLFATHYH 730
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ +++ + L K + + +D+ +L+K+ ++ S+G VAQL
Sbjct: 731 ELTELEKE------------LKHLKNLSVAVQEKGKDIIFLHKIAEKPADKSYGIYVAQL 778
Query: 976 AQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKL 1014
A LP I RA I +LE + R K+ +V+L
Sbjct: 779 ADLPKEVIERAEKILFELE-------KGREIKKKEIVQL 810
>gi|284162159|ref|YP_003400782.1| DNA mismatch repair protein MutS [Archaeoglobus profundus DSM 5631]
gi|284012156|gb|ADB58109.1| DNA mismatch repair protein MutS [Archaeoglobus profundus DSM 5631]
Length = 817
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 248/918 (27%), Positives = 416/918 (45%), Gaps = 159/918 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAHLDHNFMTASIPTF 148
TP+ +Q +K +Y D LL VG + F EDA++A++ LGI D A +P
Sbjct: 5 TPMMRQYYRIKERYKDALLFFRVGDFYELFDEDAKIASQELGIVLTSRDKKHPMAGVPHH 64
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDVGG 207
+ +++RL+ G+KV + +Q E P KA G R + + T TL
Sbjct: 65 AVFPYIKRLIEKGYKVAICEQVE-------DPSKAKGLVRREVVRVITPGTL-------I 110
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
E+ E+NYL+ + G+I G+ +++STG+ FL
Sbjct: 111 EEELLTKENNYLMSIYK-----GRI------------YGIALIDVSTGE---------FL 144
Query: 268 RSGLE------AVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ LE A +L SPAE ++ + + E NV V S+D +
Sbjct: 145 TTALESFDEVIAEVLKFSPAECIVPEGFEELEE------LKKHVNV-VHTLSQDEY---- 193
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ E + + + +D + +++ E+ V+A +R++K+
Sbjct: 194 SFKESLEILKECVQDF------ERLELEEE----------------CVRACGSALRYVKE 231
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L I + + M L + TL+ LEV RN +GS GTL+ +++ T T GS
Sbjct: 232 SLL--IKTMKIRLQKYVSRDYMILDSTTLKNLEVFRNLIDGSRRGTLIDVLDKTATAMGS 289
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL+RW+ PL + + I RL+AV E+ E ++
Sbjct: 290 RLLKRWLQRPLLNVDEIEKRLEAVEELFEKS---------------------------FL 322
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
S+ L D++R ++RI +R A + +A+ ++ EK+ S
Sbjct: 323 RQSLREVLREVYDLERIVSRIEYRKANARDLVALKNSLKAV--------------EKIKS 368
Query: 562 KTLHSALLKRLI--LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
T +S LK ++ L A V ++ D G II +G E+
Sbjct: 369 FTFNSRRLKEIVEGLKALRDVVELIENAIVDNPPINIKDGG------IIRDGYSRELDEL 422
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN---FKVPLNWAKVNST 676
R+ + + ++ RK G+ L+ + I + IE+P + F VP ++ + +
Sbjct: 423 RRIKVDHENFIKNIEERERKATGIDKLKVGYNTVIGYYIEVPKSKLRF-VPKHYKRKQTL 481
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
R+ PE+ +++ +E++ + ++ +E E + +A LD L
Sbjct: 482 VNAERFTIPELEDIEEKVLACDEKIKALEYELFNEVREEVAKRVDEIRECAFKIAELDVL 541
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQI 796
A ++ N+ +P D ++ I I GRHP ++ L F+PND NL + I
Sbjct: 542 STFAEVAVLYNYTKPKVNDGYD---IIIRDGRHPTVE--LTTKFIPNDVNLTRDSRIL-I 595
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNM GKS Y+R ALI IMAQ+G FVPAS A + V+D I+TR+G D I +G S+F+
Sbjct: 596 ITGPNMAGKSTYLRMTALITIMAQIGCFVPASYAAIGVVDRIFTRIGTVDDITRGYSSFM 655
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVTHYP 915
E++E IL+N T +SL+++DE+G+ T T DG+++A+A ++YL HK LF THY
Sbjct: 656 VEIDEVGKILKNATKRSLILLDEVGKSTGTKDGLSLAWAIIEYL--HKIGAKTLFATHYH 713
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
+++++++ G V YH + + + + K+ G S+G K+A++
Sbjct: 714 ELSELESTLEG-VKNYHFRIIEG------------ETIEFDRKIKRGACTESYGIKIAEM 760
Query: 976 AQLPPSCISRATVIAAKL 993
LP I RA I L
Sbjct: 761 V-LPKEVIDRAYEIYRSL 777
>gi|291614720|ref|YP_003524877.1| DNA mismatch repair protein MutS [Sideroxydans lithotrophicus ES-1]
gi|291584832|gb|ADE12490.1| DNA mismatch repair protein MutS [Sideroxydans lithotrophicus ES-1]
Length = 880
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 260/918 (28%), Positives = 413/918 (44%), Gaps = 113/918 (12%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K ++ D LL +G + F +DA AAK+L I A A
Sbjct: 9 HTPMMQQYLRIKAEHNDKLLFYRMGDFYELFHDDAVRAAKLLDITLTQRGASNGSPIKMA 68
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P ++ RLV G V + +Q A GP R + + T T+ +
Sbjct: 69 GVPYHAAEQYLARLVKMGESVAICEQIGDPAT------SKGPVERKVVRIVTPGTVTDSA 122
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D N L+ + G +LG+ + +++G E
Sbjct: 123 LLEEKRD------NLLLALHQRSG----------------KLGLAWLNLASGQFFVCETA 160
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE L P+E+L + + Q P + +E A R L
Sbjct: 161 TDNLAAELE----RLQPSEILHAEDAALQASIHAAFKTLPVWHFDLETARR-------GL 209
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT-IRHLKQF 382
+ + + G +D + + G A+ G + Q +++ IR ++ +
Sbjct: 210 CQQFATIDLAG----FGCDDYTVGLEAAG----ALLGYAKL----TQGQSISHIRSVQVY 257
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
+R + + A+ R ++E+T + LR G TLL +++ T GSR
Sbjct: 258 SADRYVRMDAATRR---NLEIT---------QTLR----GEPAPTLLSLLDTCATNMGSR 301
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY-- 500
LL W+ HPL DRN++ ARL+AV ++ S R + G++ E +++ ++ P
Sbjct: 302 LLANWLHHPLRDRNVLGARLEAVEQLLLPSPSGRGAGGEGRNGEVHTESSLT-PALSQGA 360
Query: 501 --ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
+ V L S D++R RI R+A P + + +L L QLH +
Sbjct: 361 RELYPQVHDQLKPSVDVERITARIALRSARPRDLSGLRDTLL----TLPQLHAALARCDA 416
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
+ L AL+ L I S+V +E + +I++G E+
Sbjct: 417 ALIQQLADALVADHTLVELLQKTIKPEP---SSVLREGS---------VIADGFDPELDE 464
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNST 676
R + + L L R + G+ L E+ V G + KVP ++ + +
Sbjct: 465 LRGIQTNCGDFLMELELRERARTGIDKLKVEYNRVHGFYIEVSFANADKVPDDYRRRQTL 524
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
K RY +PE+ D+ AN+ + ++ L + + + Q A+A LD L
Sbjct: 525 KNVERYITPELKAFEDKALSANDRALAREKFLYEQLLDQLAPFIPQLQRIAAAIAELDVL 584
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQI 796
A + NF P F DD QI+I GRHPV++ +D F PNDT L+ R +
Sbjct: 585 ATFAERAATLNFSAPQFADD---AQINIVKGRHPVVEA-QVDQFTPNDTTLNDARRTL-L 639
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNMGGKS Y+RQVA+I ++A VG FVPA A L +D I+TR+GASD + GRSTF+
Sbjct: 640 ITGPNMGGKSTYMRQVAIIALLAHVGCFVPAQEAVLGEIDQIFTRIGASDDLASGRSTFM 699
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
E+ EA+ IL N T +SLV+VDE+GRGTST DG+A+AYA +LLE + LF THY +
Sbjct: 700 VEMTEAANILHNATDKSLVLVDEIGRGTSTFDGLALAYAIARHLLELNRSYTLFATHYFE 759
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ + +F + H++ + + + +L+ V G + S+G +VA LA
Sbjct: 760 LTRLAEEFK-QLANVHLAAI-----------EHQHSIVFLHSVNEGAASQSYGLQVAALA 807
Query: 977 QLPPSCISRATVIAAKLE 994
+P S I A KLE
Sbjct: 808 GVPNSVIRSAKKQLVKLE 825
>gi|374296085|ref|YP_005046276.1| DNA mismatch repair protein MutS [Clostridium clariflavum DSM 19732]
gi|359825579|gb|AEV68352.1| DNA mismatch repair protein MutS [Clostridium clariflavum DSM 19732]
Length = 872
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 263/945 (27%), Positives = 428/945 (45%), Gaps = 161/945 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +++K +Y D +L +G + F DAE+A+K L I L+
Sbjct: 5 TPMMQQYMDIKKQYEDCILFFRLGDFYEMFFTDAEIASKELEITLTGKDCGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + ++ +L+N G+KV + +Q E A G R + + T T+ D
Sbjct: 65 VPFHSADSYICKLINKGYKVAICEQVEDPATAK------GIVKRDVIRIVTPGTVT---D 115
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+D ++NYL+ + K +N FG F V+I+TGD
Sbjct: 116 SAMLDDK---KNNYLMSLY-------KYKN-FFGIAF--------VDITTGDFTSTSIII 156
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
G L + SP+E++ K ++ L+ N + F G A+
Sbjct: 157 GNTIGKLMDEIARFSPSEIVANGEFLK--DENLVKAVKTRFNTYISTIEDKYFEIGYAMD 214
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ--- 381
+ S + +H E N D+ + A + +L+Q
Sbjct: 215 KFKSYF---------------------SDH----EICENEFDIYINASGALLEYLEQTQK 249
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
L I SF M L A T + LE+ + G+LL +++ T+T G
Sbjct: 250 VNLNHIQ----SFNKYKIEEYMILDAATRRNLELTETMREKNRKGSLLWVLDRTMTSMGG 305
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R LR+W+ PL + I RL+AV E + + +
Sbjct: 306 RTLRKWIEQPLINIYDIRDRLNAVREFKDK---------------------------FMV 338
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA---ILYAGKQLQQLH--IDGEYR 556
V L R DI+R + +I +A + I++ + I Y L+ L+ ++ E
Sbjct: 339 RMEVRELLKRVYDIERLMGKIVLGSANCRDLISLKNSLGQIPYIKSLLKDLNESLNRECD 398
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
+ S ++ R I +V KE II G EV
Sbjct: 399 RDIDSLDDVYEIIDRAICDDPPVSV------------KEGG---------IIKEGYNKEV 437
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF--KVPLNWAK 672
R+A K L L N R++ G++NL+ F V G + IE+ ++ VP N+ +
Sbjct: 438 DELRRASVDGKSWLVELENREREKTGIKNLKVGFNKVFG--YYIEVTKSYFSLVPPNYIR 495
Query: 673 VNSTKKTIRYHSPE-------VLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
+ RY + E VL A D+L +L + R+ S + +
Sbjct: 496 KQTLANCERYITEELKEIEEKVLGAEDRLVELEYQLFVEVRSKVASEINRI-------KR 548
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPND 784
+ALA +D + +LA ++ +++ P ++E V IHI GRHPV++ ++ FVPND
Sbjct: 549 TAKALAQIDVICSLAEVADRESYTMPEV--NNEDV-IHIIDGRHPVVEKVIDQGAFVPND 605
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T L IITGPNM GKS Y+RQVALI +MAQ+GSFVPA SA + + D I+TR+GA
Sbjct: 606 TYLDMAENQIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAVIGIADRIFTRVGA 665
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
SD + G+STF+ E++E + IL N T++SL+I+DE+GRGTST+DG++IA++ ++++ + K
Sbjct: 666 SDDLAAGQSTFMVEMSEVANILNNATSKSLLILDEIGRGTSTYDGLSIAWSVIEHISDKK 725
Query: 905 K--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
K LF THY ++ +++ G V Y +S + +D+ +L K++ G
Sbjct: 726 KIGARTLFATHYHELTELEGSIDG-VKNYCISV-----------EEKGEDIIFLRKIIRG 773
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
+++S+G +VA+LA +P I+RA I +LE S + R A+
Sbjct: 774 GADNSYGVQVARLAGVPAPVINRAKEILKELE---ESDINKRDAR 815
>gi|254448222|ref|ZP_05061684.1| DNA mismatch repair protein MutS [gamma proteobacterium HTCC5015]
gi|198262089|gb|EDY86372.1| DNA mismatch repair protein MutS [gamma proteobacterium HTCC5015]
Length = 886
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 260/939 (27%), Positives = 419/939 (44%), Gaps = 143/939 (15%)
Query: 73 LNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI 132
L +P +S + ++TP+ QQ + +K ++P L+ +G + F EDA+ AAK++GI
Sbjct: 10 LRAMPKKASDASSKPQHTPMMQQYLAIKAEHPHQLVFYRMGDFYELFFEDAQKAAKLIGI 69
Query: 133 Y-----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFG 187
A +P ++ RL+ G V + +Q A GP
Sbjct: 70 TLTARGQSAGEPIPMAGVPHHAAEGYLARLLKLGESVVICEQVGDPATSK------GPVE 123
Query: 188 RGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF--DVRL 245
R ++ + T T V D+ + + R + + + +
Sbjct: 124 RKVTRIITPGT------------------------VTDEALLEERREQLLAAMYSREQQH 159
Query: 246 GVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS 305
G+ ++ STG E + L A L + PAELLL TE + A P
Sbjct: 160 GIAYIDTSTGAFRVIEVEG---EASLMAELERIRPAELLL-------TETDMDAPEHPTQ 209
Query: 306 NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP 365
+ SR + AE + L E G LS G ++
Sbjct: 210 RLHGRV-SRPAWHFDQDTAERL-LKEQFGTQDLSGF------------------GCAHL- 248
Query: 366 DLAVQALALTIRHLK---QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
LA+ A + +LK + L I L R + + L A + + LE+ RN S G
Sbjct: 249 SLALSAAGCLLNYLKDTQRTALPHITGLTVEHRDDA----ILLDAASRRNLEIDRNLSGG 304
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
E TLL +++ T + GSR L+RW+ PL R ++ R AV +
Sbjct: 305 -EDNTLLSVLDTTRSAMGSRNLQRWLRRPLRQREVLRQRHGAVEAL-------------- 349
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
Q I +S+ L + DI+R +R+ ++A P + I + Q
Sbjct: 350 --------------QDVLINASLADGLKQIGDIERICSRLSLKSARPRDLIQLRQT---- 391
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSA---LLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
L E R+ + S L SA LL+R+ T + L + + D
Sbjct: 392 ------LSALPELRQPLASLNLESADIALLQRIHQT------LAPQETLQDLLERAVIDN 439
Query: 600 GDLL--NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGIT 655
+L + +I G +E+ R Q+A + L L R++ G+ L+ + V G
Sbjct: 440 PPVLIRDGGVIREGYDAELDELRGLSQNADQFLTDLEQRERERTGISTLKVAYNRVHGYY 499
Query: 656 HLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
+ + +P + + + K RY +PE+ D++ A E +A +D L +
Sbjct: 500 IEVGRTHSDNIPTEYVRRQTLKAVERYITPELKGFEDKVLSARERALAREKALYDELLDQ 559
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
Q +ALA LD L+ LA + N+ RP VD ++I GRHPV++T+
Sbjct: 560 LLNELPTIQTLARALADLDTLNCLAERATALNYCRPEMVDS---PGVNIEQGRHPVVETL 616
Query: 776 LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
+ D F PND L + + +ITGPNMGGKS Y+RQ ALI ++A VGSFVPAS+ L +
Sbjct: 617 VDDPFTPNDAVL-GDDQRMLMITGPNMGGKSTYMRQTALIVLLAHVGSFVPASACRLGPI 675
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D I+TR+GASD + GRSTF+ E+ EA+ IL N + SLV++DE+GRGTST+DG+++A+A
Sbjct: 676 DQIFTRIGASDDLAGGRSTFMVEMTEAANILHNASDNSLVLMDEIGRGTSTYDGLSLAWA 735
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
++L E + + LF THY ++ + G + H+ + + D + +
Sbjct: 736 CAEHLAEKTRALTLFATHYFELTSLPDSIDG-IANVHLDAV-----------EHDSGLVF 783
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V G + S+G +VA+LA +PP+ ++ A A LE
Sbjct: 784 MHSVKDGPANQSYGLQVARLAGVPPAVVANARKRLALLE 822
>gi|365905365|ref|ZP_09443124.1| DNA mismatch repair protein MutS [Lactobacillus versmoldensis KCTC
3814]
Length = 875
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 247/955 (25%), Positives = 425/955 (44%), Gaps = 163/955 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K TP+ +Q +E K ++PD L VG + F +DA +++L + D +
Sbjct: 6 KETPMMEQYLEYKKQFPDAFLFYRVGDFYEMFYDDAIKGSQILELTLTSRNKKADDSIPM 65
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+P + ++ LV+ G+KV V Q E A GK RG++ + T T+
Sbjct: 66 CGVPHKAVESYIDTLVDKGYKVAVCDQLENPA---DAEGKM--VKRGITRVVTPGTIMDN 120
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ E+NY+ + ++ G G+ ++STG+V
Sbjct: 121 AN-------QATENNYITAITNNKG----------------AFGLAYADLSTGEVKVTSI 157
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
++ GL + +L+ E ++ K+ Y P + G
Sbjct: 158 DNQL---GLINEMQNLNTKETVVLNTFPKK-------YLDPIRKL------------GIL 195
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
++ + L +N D + +D +D L L I +L +
Sbjct: 196 ISRITDLEDNYSFDFSAVTDDSQVD-----------------------TLKLLISYLIKT 232
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
+ + L A+ ++ S + + N LE+ +N + GTLL +++ T T G R
Sbjct: 233 QMRSLDHLKAA-QTYETSAYLLMDHNAQSNLELFKNIRTDKKSGTLLWLLDETKTAMGGR 291
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LL++W+ PL N + R QH + V Y+
Sbjct: 292 LLKQWLARPLIKANKLRDR---------------------QH------IVQVFLDNYFQR 324
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID------GEYR 556
+S L + D++R R+ + T + I ++ L Q++ + +D Y
Sbjct: 325 ASFQDYLTKVYDLERLAGRVAYGTVNGRDLIQ-LKTSLEQVPQIKSILLDIGDDQLSSYV 383
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
EK+ L+ R I+ +V G +I G ++
Sbjct: 384 EKIDDVADVRDLIDRAIVDEPPISVTGGG---------------------VIKEGYNDQL 422
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVPL-NWAKV 673
+ A ++ K+ + L ++ G+ NL+ + IE+ AN KVP + +
Sbjct: 423 DQYTDASKNGKQWMAELKVKEQEVTGINNLKIGYNKVFGYYIEISRANIDKVPEGRYQRK 482
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY +PE+ + A ++ + +D + Q L+ L
Sbjct: 483 QTLTNAERYITPELKEKESLILEAEDKSQALEYHLFDEIRAKVKKQIRRLQDLASILSEL 542
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAERE 792
D L + A +S ++V P FV+ H Q+ I +GRHPV++ +L +N ++PND +E +
Sbjct: 543 DVLQSFAIVSETYHYVAPDFVEGH---QLKIVNGRHPVVEKVLGNNSYIPNDVTFDSETD 599
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
+ITGPNM GKS Y+RQ+AL IMAQ+G FVPA +A L + D I+TR+GA+D + G
Sbjct: 600 VL-LITGPNMSGKSTYMRQLALTVIMAQIGCFVPAEAATLPIFDHIFTRIGAADDLISGD 658
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF+ E+ EA+ L+N T SLVI DELGRGT+T+DG+A+A A ++Y+ ++ M +F T
Sbjct: 659 STFMVEMREANDALKNATKNSLVIFDELGRGTATYDGMALAQAIIEYIDKNVHAMTMFST 718
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ ++++ TG V HV S+ D ++ +L+KV+PG ++ S+G V
Sbjct: 719 HYHELTVLESQLTG-VKNVHVDA-----------SEEDGNLVFLHKVLPGPADKSYGIHV 766
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPV 1027
A+LA LP ++RA I +KLE+E + ++ A D++V E + +MPV
Sbjct: 767 AKLAGLPDQVLTRADSILSKLESEGGAEIK---ASEDVIVA------ETKADMPV 812
>gi|227538471|ref|ZP_03968520.1| DNA mismatch repair protein MutS [Sphingobacterium spiritivorum ATCC
33300]
gi|227241657|gb|EEI91672.1| DNA mismatch repair protein MutS [Sphingobacterium spiritivorum ATCC
33300]
Length = 869
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 252/942 (26%), Positives = 426/942 (45%), Gaps = 146/942 (15%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
KK TPL QQ +K KYP LL+ VG + FGEDA AA +LGI + +
Sbjct: 6 KKETPLMQQYNAIKVKYPGALLLFRVGDFYETFGEDAIKAAGILGIVLTKRGSGSESETA 65
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A P L ++ +LV AG +V + Q E RG++ L T +
Sbjct: 66 LAGFPHHSLETYLPKLVRAGQRVAICDQLEDPKTTK------TIVKRGVTELVTPGVSYS 119
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V + NYL V + + G V ++ISTG+ + +
Sbjct: 120 DNIVQQKSN------NYLASVFFEKNSTG----------------VAFLDISTGEFLVAQ 157
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQ-TEKMLLAYAGPASNVRVECASRDCFIGG 320
++ ++ + +L P E++L + K+ TE S + G
Sbjct: 158 GSNSYI----DKLLQGFKPTEVILAKKQFKEFTEHF-------GSQFYTYTLDEWPYTGD 206
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A ++ +E N GI MP + + A + + +L
Sbjct: 207 YATETLLKHFE--------------------VNSMKGF-GIERMP-VGIIAAGVALHYLN 244
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN-NSNGSEYGTLLHIMNHTLTIY 439
+ + + ++ + M L T++ LE++ + N N TL +++HT +
Sbjct: 245 ETEHRNLQHI-SNISRIEEDRYMWLDRFTIRNLELIGSANENAV---TLSDVLDHTASPM 300
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G+RLL+RW+ PL DR I RL+ V +H +N +
Sbjct: 301 GARLLKRWIVMPLKDRVSIQERLNVV-----------------EHFHQNKSLR------- 336
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE-K 558
++ + + D++R I++I A P E + + ++ LYA ++L+ L + + K
Sbjct: 337 ---DELVQEIRQVGDLERLISKIGLLKANPREIMQLKRS-LYAIEKLKTLTGNADTESLK 392
Query: 559 VTSKTLHS-ALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+ S+ L++ +L++ I + A P + K ++++G S
Sbjct: 393 IISEQLNTCSLIRDRIEREMQAEPPVALNKGN--------------------VMADGIDS 432
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAK 672
E+ R RK K+ L + + G+ +L+ F +V G + KVP W +
Sbjct: 433 ELDRLRKIAFGGKDYLLEIQKREAELTGIPSLKIAFNNVFGYYLEVTNTHKDKVPEGWIR 492
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ RY + E+ +Q+ A E++ ++ + L Y Q Q +A
Sbjct: 493 KQTLVNAERYITEELKEYEEQILGAEEKIQVIENRLYAELLSAIAEYIKPVQLNAQLVAK 552
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAE 790
LD L A ++ +V+P + E + I GRHPV++ L +++ NDT L +
Sbjct: 553 LDVLLNFAVIAEKNFYVKP---EISESKVLDIKGGRHPVIEKNLPIGQDYITNDTFLDND 609
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ IITGPNM GKS +RQ LI +MAQ+GSFVPA +A + ++D I+TR+GASD++
Sbjct: 610 AQQIIIITGPNMAGKSALLRQTGLIVLMAQIGSFVPAKTAHIGLVDKIFTRVGASDNLSS 669
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMV 908
G STF+ E+NE + I+ N + +SL+++DE+GRGTST+DG++IA+A ++L H +
Sbjct: 670 GESTFMVEMNETASIMNNLSDRSLILLDEIGRGTSTYDGISIAWAIAEFLHNHPTARAKT 729
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ ++ T V ++V+ + + V +L K+VPG SE SF
Sbjct: 730 LFATHYHELNELSTSMP-RVKNFNVTV-----------KEVNNKVIFLRKLVPGGSEHSF 777
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDL 1010
G VA+LA +PP + RA I +LE E + Q + + R +
Sbjct: 778 GIHVAKLAGMPPKLLGRANEILKRLEQERTGGEQIKDSMRKI 819
>gi|320163391|gb|EFW40290.1| mismatch repair protein Msh6 [Capsaspora owczarzaki ATCC 30864]
Length = 1363
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 286/1037 (27%), Positives = 459/1037 (44%), Gaps = 182/1037 (17%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P P TL IP PS+ K+TP E+Q +K + D ++ + G + F+
Sbjct: 383 RLPTDPAYDPRTLF-IP-PSAWA----KFTPFEKQYWTIKKDHWDTVVFFKKGKFYEFYE 436
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA--- 177
+DA +A + + N A +P + + + G+KV V +TE+A KA
Sbjct: 437 KDALIAHREFDLKMSDRVNMFMAGVPESSFTMWASKFIALGYKVAKVDETESALSKAMRE 496
Query: 178 -HGPGKAGP----FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKI 232
+ + GP R L+++ T+ TL G+ S Y++ + +D +
Sbjct: 497 KNEKSQPGPKEKIIRRELTSILTRGTLM-------GDMLVDELSTYILSIKEDTASHS-- 547
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSK 291
G+ + T + F D + LE +L+ + P E++ + LS
Sbjct: 548 ------------YGLCFADTGTAEFNLCGFQDDPALTTLETLLMQVRPKEIVCERNNLSA 595
Query: 292 QTEKMLL-AYAGPASNV---RVECASRDCFIGGGALAEVMSLYENMGEDT--LSNNEDQN 345
T +++ + P N RVE F A + + ++EN T + + Q+
Sbjct: 596 ATMRLIKNTMSAPTINPLTPRVE------FWEAAATIDEL-VFENYFSSTPAATGAKQQS 648
Query: 346 MDVPEQGNHRS----------AIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR 395
VP + S AI + + P L + AL + +L+ +ER + +F
Sbjct: 649 SRVPTDSSATSQRADTACFPQAILDMQSHP-LVISALGGLVHYLRTLCIERELLSQRNFH 707
Query: 396 ---SLSGSMEMTLSANTLQQLEVLRNNSNG------------------------------ 422
+L + L TLQ L+VL +SN
Sbjct: 708 LYDALRHGSCLLLDGQTLQNLDVLFASSNTLGGGGGASGGSAHDAGSQDSSAGSSSSSSK 767
Query: 423 ---------------SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
S G+L ++N ++ +G RL RRW+ HPL I+ R DAV +
Sbjct: 768 GGKKQANSGASLTGVSSDGSLHALLNRCVSPFGKRLFRRWLCHPLRHIPEINDRYDAVED 827
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
+ R S G ++ T+L + PD++R ++RI +
Sbjct: 828 L------LRLSNLTG---------------------NLTTTLRKLPDLERIVSRIHAGSC 860
Query: 528 TPSEFIAV------MQAILY-AGKQLQQLHIDGEY--REKVTSKTLHSALLKRLILTASS 578
+F+ +Q+++ QLQ L G + +++TS+ L L +
Sbjct: 861 KLEDFLRAIDGFKQLQSLMQRMPPQLQDLSRVGSHGSTDEITSRRLRRCL---TVGEGCF 917
Query: 579 PAVIGKAAKLLSTVNKE-AADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMC 637
P + G +L + ++ A +QG L+ G + +A + V+ + +L +
Sbjct: 918 PDLSGLLTELDAAFDQRLAKEQGSLIPFA----GVDEDYDKACEDVRVLETKLQDHLVEV 973
Query: 638 RKQLGMRNLEFMSVSGITHLIELPANF-KVPLNWAKVNSTKKTIRYHSPEVLTALDQLAL 696
++ L R + + + + +E+P VP +W +STK R+ +P + + LA
Sbjct: 974 QRLLKDRTIAYRDIGNEKYQLEVPVRITDVPGDWDFKSSTKAVRRFWTPLIRKTVTPLAE 1033
Query: 697 ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVFV 754
A E V R L F + A++ AAV+ +A LDCL +LA+ S + RP V
Sbjct: 1034 AIETRQAVLREGLARALARFDTHVAKWSAAVRCVAELDCLLSLASASSSLGDPVCRPTLV 1093
Query: 755 ----DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAE-REYCQIITGPNMGGKSCYI 809
DD EPV + + RHP+L L +++ NDT L + ++TGPNMGGKS +
Sbjct: 1094 ERGDDDSEPV-LELEDLRHPLL-AYLGSSYIANDTALGGKAHPRILLLTGPNMGGKSTLL 1151
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
RQ L IMAQ+G FVPA+ L +D I+TR+GA+D+I G+STF+ EL E S IL+N
Sbjct: 1152 RQTCLSVIMAQLGCFVPAAKCVLSPVDRIFTRIGANDNILAGQSTFMVELRETSNILKNA 1211
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIAD-------IKT 922
T SLVI+DELGRGTST DG +IAY+ L +L +C LF THY + D +
Sbjct: 1212 TRDSLVILDELGRGTSTFDGYSIAYSVLHHLSHEIRCRALFSTHYHMLTDEVIDEQQREM 1271
Query: 923 KFTGS----VGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQL 978
+ TGS VG H++ L + ++VT+LYK+ GV S G VA +A L
Sbjct: 1272 QQTGSSVPIVGLAHMACLV---------DEGKREVTFLYKLTDGVCNKSHGMNVANMAGL 1322
Query: 979 PPSCISRATVIAAKLEA 995
P I RA AA+ EA
Sbjct: 1323 PSEVIDRAEQKAAEFEA 1339
>gi|261855270|ref|YP_003262553.1| DNA mismatch repair protein MutS [Halothiobacillus neapolitanus c2]
gi|261835739|gb|ACX95506.1| DNA mismatch repair protein MutS [Halothiobacillus neapolitanus c2]
Length = 881
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 259/943 (27%), Positives = 427/943 (45%), Gaps = 166/943 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
++TP+ QQ +K +PDVLL +G + F DAE AA++L + IP
Sbjct: 9 QHTPMMQQFWTMKQAHPDVLLFYRMGDFYELFYADAERAARILDLTLTTRGQSAGEPIPM 68
Query: 148 FRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL--E 200
+ VH + RL+ AG V + +Q K GP R + + T T+ E
Sbjct: 69 AGVPVHAYESYLARLIRAGESVAICEQIGETKTK-------GPMERAVVRVVTPGTVTDE 121
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
A D E N L +V + G+ ++++ GD V
Sbjct: 122 ALLD--------QREGNRLAALVPLATTPPEY-------------GLAHLDLAAGDFVLM 160
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+D + L A L + P ELLL + L++ + P D G
Sbjct: 161 RLDD----AALTAELARIDPRELLLPESLAEAADTAAKIGVDPKRWRTRADWQFDAKRGQ 216
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT----- 375
AL + +++ ++ V E ++ P L A+ LT
Sbjct: 217 AALLKHWQIHDL-----------KSFGVTE-----------IHQPALGAAAILLTYVAET 254
Query: 376 ----IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE-----YG 426
+ H+++ R+ LG + + + NT + LE+ +N GS
Sbjct: 255 QRSAVPHIERL---RVEHLGDA---------LLIDRNTRRHLELFTSNQEGSHDDGRSAA 302
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
TL+++++ T+T +GSRLL+ W+ PL D+ ++ R A+ E+ E G+
Sbjct: 303 TLINLLDETVTAHGSRLLKHWLGRPLRDQAVLRHRQQAIGELIER----------GK--- 349
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA--ILYA-G 543
++++ SL DI+R TRI +A P + + A +L A
Sbjct: 350 ---------------INALRESLRGINDIERITTRIVMGSARPRDLSGLRDALGVLPALS 394
Query: 544 KQLQQLHIDGEYRE---KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG 600
QL QL + +R+ ++T + LL R ++T P V + D G
Sbjct: 395 AQLNQLDLP-LWRDLAVRLTDQPAPRELLNRALVT--QPPVWLR-------------DGG 438
Query: 601 DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLI 658
+I+ G +E+ R + A + L++L R Q G+++L+ + V G +
Sbjct: 439 ------VIAAGFDAELDELRHLSEHADDALNALEAQARLQSGIQSLKIAYNRVQGFYFEV 492
Query: 659 ELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG 718
K+P + + + K RY + E+ T D++ A + + + L+
Sbjct: 493 SRLQAEKMPPQFIRRQTLKSVERYTTEELKTFEDRVLSARDRALAREQGLFTELLQTLAT 552
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-- 776
+ + + +A+A +D LH+LA ++ + +V P EP IHI +GRHPV++ +
Sbjct: 553 HQSALRRMAEAIAEVDVLHSLARVAECQRWVAPEL--GSEP-GIHIEAGRHPVIEALTKQ 609
Query: 777 -LDN--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
L N F PND L R+ +ITGPNMGGKS Y+RQ ALI ++A +G+FVPA+ A +
Sbjct: 610 TLGNQPFTPNDCELTPNRQLL-MITGPNMGGKSTYMRQTALIVLLAHIGAFVPATRARIG 668
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
+D I+TR+GA D + GRSTF+ E+ E + IL T SLV++DE+GRGTST DG+A+A
Sbjct: 669 PIDRIFTRIGAGDDLASGRSTFMVEMTETAEILHTATENSLVLIDEIGRGTSTFDGLALA 728
Query: 894 YATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDV 953
+A ++L+ + + LF THY ++ + +F +V H+ +T HK D+
Sbjct: 729 WAVAEHLIRRNRALTLFATHYFELTQLTERF-DTVRNVHLDAVT-HK----------DDL 776
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+L+ V G + S+G KVA LA LP I RA + +LE +
Sbjct: 777 IFLHSVKDGPASQSYGIKVAALAGLPREAIRRAQALLKQLEQQ 819
>gi|291559008|emb|CBL37808.1| DNA mismatch repair protein MutS [butyrate-producing bacterium
SSC/2]
Length = 875
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 247/935 (26%), Positives = 429/935 (45%), Gaps = 160/935 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ QQ +++K + D +L +G + F +DA A+K L G L+
Sbjct: 6 KLTPMMQQYMQIKEENKDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLEERAPM 65
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P ++ ++ +LV G+KVG+ +Q E P +A G R + + T T +
Sbjct: 66 CGVPYHAVDSYLNKLVEKGYKVGICEQVE-------DPSQAKGIVKREIVRIVTPGTNIS 118
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ + ++ NYL+C+ +DG+ G IS DV G+
Sbjct: 119 QQSLDDEKN------NYLMCIFANDGSYG---------------------ISFVDVTTGD 151
Query: 262 FNDGFLRS--GLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
F + S + + PAE++ C D F+
Sbjct: 152 FRTTSMDSLAKVRDEIFKFEPAEII--------------------------C--NDAFLI 183
Query: 320 GGA----LAEVMSLYENMGEDTLSNNEDQNMDVPEQ---GNHRSAIEGIMNMPD--LAVQ 370
G L + MS+ + E + E + Q GN G+++ P +A
Sbjct: 184 SGMDFDYLKDKMSIVISSIEPYHFDEEQAEERIKRQFKVGNLEGL--GLLDHPMGVIATG 241
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
AL + ++ L+ +M + A S M + +++ + LE+ + + G+LL
Sbjct: 242 ALLGYLHETQKSSLDHLMHIEA----YETSEFMIIDSSSRRNLELCETLRDKQKKGSLLW 297
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++ T T G+R+LR V PL D+ I R DA++ + +D
Sbjct: 298 VLDKTKTAMGARMLRNMVEQPLVDKKKIEERYDAITTL--------------------TD 337
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA------VMQAILYAGK 544
TIV + L+ + D++R +T++ ++TA P + IA ++ AI +
Sbjct: 338 QTIVREELREYLNPIY-------DLERLMTKVSYKTANPRDMIAFKTSLELLPAIKTVLE 390
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+ + + G + + +H+ L +I P I +
Sbjct: 391 ECKDPLLSGLREDLDPLEDIHNLLEDSII--EEPPLAIKEGG------------------ 430
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
II G ++ + ++A K+ L L R++ G++NL+ + +++ ++
Sbjct: 431 --IIKEGFKEDIDKLKRAKTEGKQWLMELEEREREKTGIKNLKIKFNKVFGYYLDVTNSY 488
Query: 665 K--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
K VP ++ + + + RY + E+ D + + + L + + + G
Sbjct: 489 KDLVPDHYIRKQTLANSERYTTEELNQLADTILGSEDRLYALEYETYVMIRETLAGEMER 548
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFV 781
+A +D L +LA ++ +FVRP + I I GRHPV++ ++ D F+
Sbjct: 549 ISRTANVIAQIDALASLAYVAERNHFVRPKL---NVRGTIDIKDGRHPVVEQVIPNDMFI 605
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
NDT L ++ IITGPNM GKS Y+RQVALI +MAQ+GSFVPA+ A + ++D I+TR
Sbjct: 606 SNDTYLDNKKNRVAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAAKANIGIVDRIFTR 665
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
GASD + G+STF+ E++E + ILRN T SL+I+DE+GRGTST DG++IA+A ++Y+
Sbjct: 666 AGASDDLASGQSTFMVEMSEVANILRNATKNSLLILDEIGRGTSTFDGLSIAWAVVEYIS 725
Query: 902 EHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
K LF THY ++ T+ G + + H +Y + K G D+ +L K+
Sbjct: 726 NSKLLGAKTLFATHYHEL----TELEGKIDSVH-NYCIAVKEQG-------DDIVFLRKI 773
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
V G ++ S+G +VA+LA +P + I+RA IA +LE
Sbjct: 774 VKGGADKSYGVQVAKLAGVPDAVINRAKEIARELE 808
>gi|291534090|emb|CBL07203.1| DNA mismatch repair protein MutS [Megamonas hypermegale ART12/1]
Length = 810
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 249/927 (26%), Positives = 416/927 (44%), Gaps = 165/927 (17%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI----YAHLDHNFMTASIPTFR 149
QQ +K +PD +L +G + F +DA + +K L + + +P
Sbjct: 3 QQYQTVKNAHPDQILFFRLGDFYEMFLDDAILVSKELELTLTKRSTAGDGIPMCGVPYHA 62
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGE 209
++ +LVN G+KV + +Q P G R + + T T V
Sbjct: 63 AESYINKLVNKGYKVAICEQI-------GDPKAKGLTKREVIKIITPGT------VMNES 109
Query: 210 DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRS 269
++NY+ + +++ + ++ G D ISTG+ Y + DG R
Sbjct: 110 ALTSSKNNYIALIYEEN-------HAIYLAGAD---------ISTGECFYSIY-DGPDRC 152
Query: 270 GLE-AVLLSLSPAELLLGQPLSKQTE-KMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
L L L ELLL +P S + E K L+ +R+ +C + L E+
Sbjct: 153 QLLFDELYRLMMPELLLIKPFSYERELKNFLS-------LRL----NNCLVN--ELTEIT 199
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
S E++ Q+ D+ + +++ A + I + + + + + HL +
Sbjct: 200 SQIEDLML--------QHFDMHNRPDNKIAHKAIATLLEYLHETVKTDLTHLNKLTY--- 248
Query: 388 MCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRW 447
L S + + TL+ LE+ RN +G + TL +++ T T GSRLLR+W
Sbjct: 249 ---------LDSSKSLFIDTYTLRNLEITRNLRDGGKKDTLYDVLDFTKTAMGSRLLRKW 299
Query: 448 VTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLT 507
+ +PL I+ RLDAV+ + SD + + +++
Sbjct: 300 LEYPLLSPKKINDRLDAVANLV-------------------SD--------FSLRNNLRE 332
Query: 508 SLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSA 567
L D +R +TR+ TA + A +++ LY
Sbjct: 333 QLKEIYDFERLLTRMEVGTANARDMNA-LKSSLY-------------------------- 365
Query: 568 LLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM----------------IISNG 611
+L A ++ AKLL +++ + DL+ L+ I +G
Sbjct: 366 -----VLPAIKKSLAKATAKLLVNIHQNISTYDDLVVLIDKAIVEDPSFSIREGGFIKDG 420
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLN 669
E+ R +++K L + + + G+++L+ + V G + + VP N
Sbjct: 421 YNQELDEYRNIAKNSKRLLQQMEEDEKNKTGIKSLKIGYNKVFGYYIEVRHSSTEMVPEN 480
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY +PE+ ++ A E++ + + + Q
Sbjct: 481 YIRKQTLANAERYITPELKEFETKILGAQEKIVQLEYNLFTELRDILKTKISSIQNTAHE 540
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLH 788
+A LD L +LA N++RP +DD IHI GRHP+++ IL D FVPNDT+L
Sbjct: 541 IAILDVLVSLAQAGDEYNYIRPKLLDDG---TIHIKDGRHPLVERILNRDLFVPNDTHLD 597
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ IITGPNM GKS Y+RQ AL+ +M QVGSF+PA A + +D I+TR+GASD +
Sbjct: 598 NAQNEIMIITGPNMAGKSTYMRQSALLTLMTQVGSFIPAREASISPVDKIFTRIGASDDL 657
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
G+STF+ E+NE S+IL+ T +SLVI+DE+GRGTST+DG++IA A ++++ +H
Sbjct: 658 VSGQSTFMVEMNEVSHILKYATNKSLVILDEIGRGTSTYDGMSIARAVIEHIRDHIGAKT 717
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHV-SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ D++ HV +Y + K G DVT+L +++ G ++ S
Sbjct: 718 LFATHYHELTDLEDDV-------HVKNYCIAVKEKG-------SDVTFLRRIIRGSADKS 763
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLE 994
+G VA+LA LP + RA I LE
Sbjct: 764 YGIHVAKLAGLPQEVVKRAETILIDLE 790
>gi|212212527|ref|YP_002303463.1| DNA mismatch repair protein MutS [Coxiella burnetii CbuG_Q212]
gi|212010937|gb|ACJ18318.1| DNA mismatch repair protein [Coxiella burnetii CbuG_Q212]
Length = 871
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 253/939 (26%), Positives = 420/939 (44%), Gaps = 149/939 (15%)
Query: 81 SQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----- 133
S TT N ++TP+ +Q + +K +YPD+L+ +G + F +DA+ AAK+L I
Sbjct: 19 SPTTQNDFSQHTPMMRQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARG 78
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
H A +P + ++ +LV G V + +Q A GP R ++ +
Sbjct: 79 QSAGHAIPMAGVPYHAVENYLTKLVRLGESVVICEQIGDPATSK------GPVAREVTRI 132
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T T+ + D N L+ + + R G+ ++I+
Sbjct: 133 ITPGTVSDEALLDEHRD------NTLMVIHQEKD----------------RFGIATLDIT 170
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G + E + L A + + PAELL+ + S K A +++
Sbjct: 171 SGRFLIQEI---ISENALFAEIERIRPAELLISEENSVHPLK--------ADSIKRRPPW 219
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA-- 371
F AL + ++ D GI ++P LA+ A
Sbjct: 220 E--FDHATALTLLCQQFQTKSLDGF---------------------GITHLP-LAITAAG 255
Query: 372 -LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L + + ++ L I + A + + ANT LE++ N G E +L
Sbjct: 256 CLLQYVNYTQKSALPHIHSIQAE----QNEEALFIDANTRLNLELI-TNLQGEEVHSLAW 310
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T GSRLLRRW+ PL D+ L+ R +AVS
Sbjct: 311 LLDHTATAMGSRLLRRWINRPLRDQILLQQRQNAVS------------------------ 346
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQ 547
T++E + Y S + +L D++R + RI R+A P + + + QA+ +QL
Sbjct: 347 -TLLEKRNY---SEIYENLRHIGDLERIVARIALRSARPRDLMQLRQALGVLPTLHQQLT 402
Query: 548 QLHIDGEYREKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L ++ + +E + L L + L + + P VI D G
Sbjct: 403 NLPLNKQLQEIKNNLGLFDELFRLLQKAIIENPPIVI--------------RDGG----- 443
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
+I++G + + R ++ + L L R++ + L+ + + G I
Sbjct: 444 -VIADGYDAPLDELRNMSTNSHQFLIDLEQQERERTKINTLKVGYNRIHGYYIEISRVQA 502
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ P + + + K RY +PE+ D++ + + ++ L
Sbjct: 503 KQAPTEYIRRQTLKNVERYITPELKIFEDKVLSSRSRALAREKELYEQLLDTLIEKLIPL 562
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
Q A+A LD L+ LA + NF P F D P+ I I +GRHP+++ ++ D F+PN
Sbjct: 563 QQCASAIANLDVLNTLAERADTLNFNAPQFCD--YPI-IKIEAGRHPIVENVMTDPFMPN 619
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D +L +R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA +A+L +D I+TR+G
Sbjct: 620 DIHLDEKRRML-IITGPNMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIG 678
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + GRSTF+ E+ E + IL N T +SLV++DE+GRGTST DG+++AYA YL
Sbjct: 679 AADDLASGRSTFMVEMTETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATK 738
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K LF THY ++ + + +V H+ + + ++ + +L+ + G
Sbjct: 739 LKAFALFATHYFELTALASTLP-AVKNVHLDAV-----------EHEEKIIFLHALREGP 786
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+ S+G +VAQLA +P S I A +LE V S Q
Sbjct: 787 ANKSYGLQVAQLAGIPRSVIQHARQKLEELENPVISETQ 825
>gi|218290139|ref|ZP_03494301.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
LAA1]
gi|218239848|gb|EED07037.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
LAA1]
Length = 867
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 260/912 (28%), Positives = 406/912 (44%), Gaps = 149/912 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q E+K+K D LLM +G + F EDA +A++ L I A
Sbjct: 4 TPMMRQYREIKSKLDDTLLMFRLGDFYELFFEDAVIASQALDITLTGRDAGEAGRVPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P L+ ++ RL+ GF+V + Q E P A G R + + T T E
Sbjct: 64 VPHHALDGYLERLIEQGFRVAICDQVED-------PKAAKGLVRREIVRIVTPGTAVTEE 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
++ YL + GD +G+ V++ GDV +G +
Sbjct: 117 ----------SDARYLAAL------------AFQGD----EVGLALVDVGAGDVWFGAGS 150
Query: 264 DGFLRSGLEAVLLSLSPAELLL--GQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG-- 319
+R + P E+LL Q E+++ + A RV S D F+
Sbjct: 151 AEDMRDHVA----RFRPREILLEGAQEFPGWLEEIVNRHG--AIVTRVPAPSGDAFLMHY 204
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
G + E + L G LS NM + D + AL RHL
Sbjct: 205 GASSPEALGL--TPGSAALSAC---NM-------------AFQYLRDTQMAAL----RHL 242
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
A R L M LS T++ LE++ S +L ++ T+T
Sbjct: 243 ------------APPRPLLEPGRMWLSERTVEHLELVPMGSGRERRTSLYDVIRETVTAA 290
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ PL DR I RLDAV+ +A+ +
Sbjct: 291 GSRLLRTWMLRPLVDRGAIEERLDAVTALADDL--------------------------- 323
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
+ + + SL D+ R + + ATP + +A+ AI + L IDG
Sbjct: 324 LLRAEIRESLKGMHDLSRLLAKCSIGRATPRDLLALAHAIEKGQAAISLLPIDG------ 377
Query: 560 TSKTLHSALLKRLI--LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
+L RL+ L P A +L+ AA+ G I +G E+
Sbjct: 378 ------PSLFGRLVCGLPDFRPLAEHIARELVDDPPASAAEGG------IFRDGVDPEID 425
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNS 675
R R + L R++ G+++L+ + IE+ AN VP ++ + +
Sbjct: 426 RLRSLQSDGRRWLREFEARERERTGIKSLKIGYNKVFGYYIEVSKANLSLVPADYERKQT 485
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
R+ PE+ + A E + + RA ++S++ +E Q + + +D
Sbjct: 486 LAAGERFTHPELKAREADMLTAAERVVELERARFESWVHRVREQASELQRFAEVVNTIDV 545
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
L LA L+ + +VRP DD V I I GRHPV++ L FVPND L +
Sbjct: 546 LAGLAELAVKRGYVRPEVTDD---VGIEIREGRHPVVEASLGSEFVPNDLVLTPDAPII- 601
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
++TGPNMGGKS Y+RQ ALI I+AQ+GS+VPA SA + ++D ++TR+GASD + +G+STF
Sbjct: 602 LLTGPNMGGKSTYMRQAALIAILAQMGSYVPARSARIGLVDRVFTRIGASDDLSRGQSTF 661
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVTHY 914
+ E+ E + ILR + +SLV++DE+GRGTST+DG++IA A L+ L E + + + LF THY
Sbjct: 662 MVEMTELAEILREASGRSLVLLDEIGRGTSTYDGLSIAEAVLEDLAERRDRPLTLFATHY 721
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ +F+ ++ M ++D + +L+ VV S+ S+G +VA+
Sbjct: 722 HELISFSERFS----------CVRNQSMAV--EETDTGIRFLHTVVMRPSDRSYGIQVAR 769
Query: 975 LAQLPPSCISRA 986
LA LP I RA
Sbjct: 770 LAGLPDRVIRRA 781
>gi|399521380|ref|ZP_10762120.1| DNA mismatch repair protein mutS [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399110618|emb|CCH38680.1| DNA mismatch repair protein mutS [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 855
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 276/929 (29%), Positives = 420/929 (45%), Gaps = 161/929 (17%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
+TP+ QQ +LK ++PD L+ +G + F EDA+ AAK+L I SIP
Sbjct: 7 HTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMC 66
Query: 149 RLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+ H + +LV G V + +Q A GP R + + T T+
Sbjct: 67 GIPFHSLEGYLAKLVKLGESVVICEQIGDPATSK------GPVERQVVRIITPGTISDEA 120
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRL-GVVAVEISTGDVVYGEF 262
+ D N L V+ D+ RL G+ ++I++G E
Sbjct: 121 LLDEHRD------NLLAAVLGDE-----------------RLFGLAVLDITSGRFSVQEI 157
Query: 263 NDGFLRSGLEAVLLSLSPAELLL--GQPLSKQTEKMLLAYAGPASNVRVECA-SRDCFIG 319
G+ L A L LSPAELL+ PL EK S R RD
Sbjct: 158 K-GW--ENLLAELERLSPAELLIPDDWPLGLPAEKR------KGSRRRAPWDFDRD---- 204
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
+ SL + L +N+ + AI + A + + HL
Sbjct: 205 ----SAFKSLCQQFSTQDLKGFGCENLTL--------AIGAAGCLLSYAKETQRTALPHL 252
Query: 380 KQFGLER----IMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
+ ER ++ GAS R+L +L++ N G TL +M+
Sbjct: 253 RSLRHERLDDTVILDGASRRNL--------------ELDI---NLAGGRDNTLQSVMDRC 295
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T SRLL RW+ PL DR ++ AR DA++ + + YR ++
Sbjct: 296 QTAMASRLLGRWLNRPLRDRAVLEARQDAIARL---LDGYR--------------FETLQ 338
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK-QLQQLHIDGE 554
PQ L +G D++R + RI R A P + + A+ + QL +D
Sbjct: 339 PQ--------LKEIG---DLERILARIGLRNARPRDLARLRDALAALPELQLAMTSLDTP 387
Query: 555 YREKVTSKTLH----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN 610
+ +++ S + LL R I+ + PAVI L S + E D L M +
Sbjct: 388 HLQQLASSISTYPELADLLARAIID-NPPAVIRDGGVLKSGYDAEL----DELQAMSENA 442
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN--FKV 666
GQF AR+ +++ G+ NL+ + V G + IELP
Sbjct: 443 GQFLMDLEARE----------------KERTGLANLKVGYNRVHG--YFIELPTKQAESA 484
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P ++ + + K R+ +PE+ D+ A + +D L+ G+ A Q +
Sbjct: 485 PADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYDELLERLIGHLAPLQDS 544
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
ALA LD L LA + N + RP FVD EP + I GRHPV++ +L FV ND +
Sbjct: 545 AAALAELDVLSNLAERALNLDLNRPRFVD--EPC-MRIDQGRHPVVEQVLTTPFVANDLD 601
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA++ EL ++D I+TR+G+SD
Sbjct: 602 LDDNRRML-IITGPNMGGKSTYMRQTALIVLLAHIGSFVPAAACELSLVDRIFTRIGSSD 660
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
+ GRSTF+ E++E + IL N + +SLV++DE+GRGTST DG+++A++ ++ L +
Sbjct: 661 DLAGGRSTFMVEMSETANILHNASERSLVLMDEVGRGTSTFDGLSLAWSAAEH-LARLRA 719
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ + + V H+S T H ++ + +L+ V PG +
Sbjct: 720 FTLFATHYFELT-VLPESEPVVANVHLSA-TEH----------NERIVFLHHVQPGPASQ 767
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEA 995
S+G VAQLA +P + ISRA A+LEA
Sbjct: 768 SYGLAVAQLAGVPGTVISRAREHLARLEA 796
>gi|163848498|ref|YP_001636542.1| DNA mismatch repair protein MutS [Chloroflexus aurantiacus J-10-fl]
gi|222526432|ref|YP_002570903.1| DNA mismatch repair protein MutS [Chloroflexus sp. Y-400-fl]
gi|189030708|sp|A9WFZ9.1|MUTS_CHLAA RecName: Full=DNA mismatch repair protein MutS
gi|254766621|sp|B9LB04.1|MUTS_CHLSY RecName: Full=DNA mismatch repair protein MutS
gi|163669787|gb|ABY36153.1| DNA mismatch repair protein MutS [Chloroflexus aurantiacus J-10-fl]
gi|222450311|gb|ACM54577.1| DNA mismatch repair protein MutS [Chloroflexus sp. Y-400-fl]
Length = 966
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 269/968 (27%), Positives = 447/968 (46%), Gaps = 147/968 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI------YAHLDHNFM------ 141
+Q +LK + D +L+ G + F +DA++ A++L I YA +D
Sbjct: 11 RQYRKLKEEAADAILLFRFGDFYETFDDDAKLIAELLDITLTRKEYA-VDKRLPKDQQKL 69
Query: 142 ---TASIPTFRLNVHVRRLVNAGFKVGVVKQ-TETAAIKAHGPGKAGPFGRGLSALYTKA 197
A +P ++ +V L+ G++V + +Q +ET A++ ++ + GL+ + +
Sbjct: 70 YAPMAGMPYHAVDRYVSELIARGYRVAIAEQLSETEAMRNDTRPRS-VYAAGLTPVESSG 128
Query: 198 TLEAAEDVGGGEDGC--------GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
+ V G +NYL V+ + G VG +
Sbjct: 129 KMVQRAIVRVITPGTVIDPAMLPDRTNNYLAAVIVEQGKVG----------------LAY 172
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELL------------------LGQ---P 288
++STG+ EF D L+A L LSPAE+L L Q P
Sbjct: 173 ADLSTGEFAAAEFTDARALMQLQAELARLSPAEVLVPDDEALRLPNLEPVQARLSQDLAP 232
Query: 289 LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
L+K+ + LL + A R+E AS + G + +E T + +++ +
Sbjct: 233 LTKEEREALLPHERVAR--RLEGASAASWTQGYVTEWPLWRWELA---TTTEVLCEHLAL 287
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSAN 408
P A+ G+ P LA +A +++ + +R+ L A R M L
Sbjct: 288 PS-----LAVCGLDGRP-LATRAAGALLQYAQVTQRQRVSQLRA-LRVYHTGAYMLLDPQ 340
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE- 467
T + LE+L + +L+ +++ T T G+RLLRRW+T PL + R AV+
Sbjct: 341 TRRNLELLESGGRQGAKASLIAVLDRTCTAMGARLLRRWITQPLIVIEPLQVRQHAVARL 400
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH--R 525
+AE+M V ++L PD++R + RI
Sbjct: 401 VAETMARL----------------------------EVRSALADLPDMERALNRIAQGIT 432
Query: 526 TATPSEFI----------AVMQAILYAGKQLQQLHIDGE--YREKVTSKTLHSALLKRLI 573
ATP + AV QA+ L + GE V + L LL+R
Sbjct: 433 VATPRDMTQLRAALRKLPAVAQAVQALLPDLLAAEMPGEPPLVFDVCADVLD--LLER-A 489
Query: 574 LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSL 633
L PA++G + L AA++G +I G + +A + A+E +D L
Sbjct: 490 LDDDPPALLGSSNYL------RAAEEGGERPRRVIRPGFDQRLDALIRASRHAQEFIDRL 543
Query: 634 INMCRKQLGMRNLE--FMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTA 690
+ R++ G+R+L+ + V G I + K +P ++ + + RY + E+
Sbjct: 544 ESKERERTGIRSLKVGYNQVFGYYIEISRAVDAKLIPAHYERKQTLVNAERYVTEELKYY 603
Query: 691 LDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVR 750
L+ A +L + R + E + +A + A+A +D L ALA ++ +V+
Sbjct: 604 EGLLSDARLKLVDLERDIFQRLCDELQPHLDRLRATIAAVARIDALAALAEVAVRGRYVQ 663
Query: 751 PVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIR 810
P D + I GRHPV++ L + F+ ND +L E+ IITGPNM GKS ++R
Sbjct: 664 PRLRTDR---VLRIKQGRHPVVERTLSEPFIGNDIDLDGEQAQILIITGPNMAGKSTFLR 720
Query: 811 QVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCT 870
QVALI +MAQ+GSFVPA AE+ ++D I+TR+GA D I G+STF+ E+ E + +L T
Sbjct: 721 QVALITLMAQIGSFVPADEAEIGLVDRIFTRIGAQDDIATGQSTFMVEMTETAALLMQST 780
Query: 871 AQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVTHYPKIADIKTKFTGSV 928
+SL+I+DE+GRGTST+DG+AIA A ++Y+ +H + C LF THY ++ ++ + V
Sbjct: 781 PRSLIILDEVGRGTSTYDGMAIARAVVEYIHDHPRLGCRTLFATHYHELIALERELP-RV 839
Query: 929 GTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATV 988
YH++ + + D V +L+++ PG ++ S+G VA+LA +PP I RA+
Sbjct: 840 RNYHMAAV-----------ERDGRVVFLHELRPGGADRSYGIHVAELAGIPPEVIRRASA 888
Query: 989 IAAKLEAE 996
+ A LE +
Sbjct: 889 LLADLEGQ 896
>gi|88801798|ref|ZP_01117326.1| DNA mismatch repair protein [Polaribacter irgensii 23-P]
gi|88782456|gb|EAR13633.1| DNA mismatch repair protein [Polaribacter irgensii 23-P]
Length = 870
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 262/951 (27%), Positives = 434/951 (45%), Gaps = 184/951 (19%)
Query: 77 PTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--- 133
PTP KK TPL +Q +KTKYPD +L+ VG + FGEDA AA VLGI
Sbjct: 4 PTP-------KKVTPLMKQYNAIKTKYPDAMLLFRVGDFYETFGEDARKAANVLGITLTK 56
Query: 134 --AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS 191
A + A P LN ++ +LV AG +V + Q E + + RG++
Sbjct: 57 RGAGSETETALAGFPHHSLNTYLPKLVKAGMRVAICDQLEDPKMTKN------IVKRGVT 110
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
L T V ++ ++N + V D N +LG+ ++
Sbjct: 111 ELITPG-------VSFNDEVLQTKTNNFLAAVHFDKN---------------QLGISFLD 148
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
ISTG+ + + ++ + +L + +P+E+L+ Q +KQ
Sbjct: 149 ISTGEYLVAQGTAEYI----DKLLQNFNPSEVLV-QKQNKQ------------------- 184
Query: 312 ASRDCFIGGGALAEVMSLYENMG-----EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
E ++L+EN ED + E N ++ + + ++G + D
Sbjct: 185 -------------EFLTLFENRYYTFYLEDWVFQKEYAN-EILQNHFEVNTLKG-FGVED 229
Query: 367 L--AVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
L + A + +L + + + A R +S + + T++ LE+ N N
Sbjct: 230 LKNGIIAAGAVLYYLSETQHNHLKHIQAISR-ISEDNYVWMDRFTVRNLELY--NPNSIN 286
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
TLL +++ T++ G RLL+RW+ PL + I R + V +S
Sbjct: 287 AITLLDVIDKTISPMGGRLLKRWLALPLKNIKDIKKRHELVKFFIDS------------- 333
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAIL- 540
DE + VT L + D++R I+++ ++P E + + ++AIL
Sbjct: 334 DEFSKTVTY--------------QLKQISDLERLISKVATAKSSPREIVLLKDSLKAILP 379
Query: 541 ----------YAGKQL-QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
K+L QLH + EK+T +A P I K
Sbjct: 380 IKSAAEKSKNSTVKELGNQLHHATDLIEKITETLFENA-----------PVNINKGNA-- 426
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE-- 647
I+ G E+ R S K+ LD+++ + G+ +L+
Sbjct: 427 ------------------IATGVHGELDELRAISTSGKDYLDAMLARETEITGITSLKIS 468
Query: 648 FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRA 707
F +V G + KVP W + + RY + E+ ++ A +++ + +
Sbjct: 469 FNNVFGYFIEVRNAHKDKVPETWIRKQTLVNAERYITEELKEYETKILGAEDKIQKLEQE 528
Query: 708 AWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSG 767
+ L+ + Q Q +A +DCL + + L+ + N+VRP E + I +G
Sbjct: 529 IFSKLLQYIIQFVQIVQENAQIIAKIDCLLSFSVLAIDNNYVRPSM---DESTDLEIKNG 585
Query: 768 RHPVLDTIL-LDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
RHPV++ L +D +V ND L+ +++ +ITGPNM GKS +RQ ALI ++AQ+GS+V
Sbjct: 586 RHPVIEKQLPIDQTYVANDVVLNRKQQQIIMITGPNMSGKSAILRQTALIVLLAQMGSYV 645
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PA +A++ ++D I+TR+GASD+I G STF+ E+NE + IL N + +SLV++DE+GRGTS
Sbjct: 646 PAQNAKIGIVDKIFTRVGASDNISMGESTFMVEMNETASILNNLSERSLVLLDEIGRGTS 705
Query: 886 THDGVAIAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
T+DG++IA+A ++L EH K LF THY ++ ++ T F + ++VS
Sbjct: 706 TYDGISIAWAITEFLHEHPSKAKTLFATHYHELNEMTTTFE-RIKNFNVSV--------- 755
Query: 945 MDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
K +D + +L K+V G S SFG VA+LA +P I RA I +LE
Sbjct: 756 ---KELKDTIIFLRKLVSGGSNHSFGIHVAKLAGMPNMVIHRANKILMQLE 803
>gi|92116234|ref|YP_575963.1| DNA mismatch repair protein MutS [Nitrobacter hamburgensis X14]
gi|122418637|sp|Q1QQJ4.1|MUTS_NITHX RecName: Full=DNA mismatch repair protein MutS
gi|91799128|gb|ABE61503.1| DNA mismatch repair protein MutS [Nitrobacter hamburgensis X14]
Length = 907
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 268/969 (27%), Positives = 446/969 (46%), Gaps = 173/969 (17%)
Query: 72 TLNP-IPT-PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV 129
T+ P +PT P++ + TP+ +Q +E+K P +LL +G + F EDAE+A+
Sbjct: 2 TIQPAVPTSPTNAAPEAARVTPMMEQYLEIKAANPGLLLFYRMGDFYELFFEDAEIASCT 61
Query: 130 LGIY-----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
LGI H + +P R + ++ RL+ AG +V V +Q E A A G
Sbjct: 62 LGITLTKRGKHQGADIPMCGVPVERSDDYLHRLIAAGHRVAVCEQMEDPA-AARRRGNKS 120
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFD 242
R + L T TL ED +NYL+ + + R G+
Sbjct: 121 VVRRDVVRLITPGTLT--------EDTLLDARANNYLLAL-------ARARASSGGN--- 162
Query: 243 VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAG 302
R+ + ++IST + + E + G L A L ++P E+++ L + L
Sbjct: 163 -RIALAWIDISTAEFIVTECSTG----ELAATLARINPNEVIVSDALYGDPDMAALLREL 217
Query: 303 PASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
P+ V +RD F G A + + + ++G+
Sbjct: 218 PS----VTPLTRDVFDGATAERRLCDYFAV-----------------------ATMDGLS 250
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
M L A A + ++ + + + L R +GS M + T LE+ R + G
Sbjct: 251 AMSWLEATAAAAAVTYVDRTQIGKRPPLSPPSREAAGST-MAIDPATRANLELTRTLA-G 308
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
G+LL ++ T+T GSRLL + + PL D I+ RLDAV+ TS+S
Sbjct: 309 ERRGSLLDAIDRTMTAAGSRLLAQRLAAPLTDIAAIARRLDAVAAF--------TSDSAA 360
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
+ D + T L +PD+ R + R+ P + + I+ A
Sbjct: 361 RDD-------------------IRTILRTAPDMSRALARLSVGRGGPRDLAGLRDGIMAA 401
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ-GD 601
+ L +L SAL P I A + L ++E A + G+
Sbjct: 402 DRTLARL----------------SAL-------PDPPQDIVAAMQALRRPSRELARELGE 438
Query: 602 LL--NLMIIS-NGQFSE------VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
L NL ++ +G F+ + ARK ++ + ++ ++ G++ L+ +
Sbjct: 439 ALAENLPLMKRDGGFAREGYEPTLDEARKLRDDSRLVVAAMQARYTEETGVKTLKIRHNN 498
Query: 653 GITHLIELPANFKVPLNWAKVNST---KKT----IRYHSPEVLTALDQLALANE-----E 700
+ + +E+ A L A +N+T ++T +R+ + E+ ++A A + E
Sbjct: 499 VLGYFVEVTAQHGDKLTSAPLNATFIHRQTLAGQVRFTTSELGEIEARIANAGDRALGLE 558
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV 760
L I R A + + E G + +AA A A LD +LA L+ ++NF RP VD +
Sbjct: 559 LEIFDRLA--AVVVEAGD---DLRAAAHAFAQLDVAASLAKLATDENFTRPE-VDAS--L 610
Query: 761 QIHICSGRHPVLDTILL---DNFVPNDTNLHA----EREYCQIITGPNMGGKSCYIRQVA 813
I GRHPV++ L F+ N +L ++TGPNM GKS ++RQ A
Sbjct: 611 GFAIEGGRHPVVEQALKRAGQPFIANACDLSPGPGQTSGQIWLLTGPNMAGKSTFLRQNA 670
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
LI +MAQ+GSFVPA+ A + ++D +++R+GA+D + +GRSTF+ E+ E + IL + ++
Sbjct: 671 LIALMAQIGSFVPATRARIGMIDRLFSRVGAADDLARGRSTFMVEMVETAVILNQASERA 730
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF------TGS 927
LVI+DE+GRGT+T DG++IA+A +++L E KC LF THY ++ + K T
Sbjct: 731 LVILDEIGRGTATFDGLSIAWAAIEHLHEANKCRALFATHYHELTALSAKLPRLFNATVR 790
Query: 928 VGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
V +H +V +L++V+PG ++ S+G +VA+LA LPPS ++RA
Sbjct: 791 VKEWH------------------GEVVFLHEVLPGAADRSYGIQVAKLAGLPPSVVARAK 832
Query: 988 VIAAKLEAE 996
+ AKLEA+
Sbjct: 833 SVLAKLEAQ 841
>gi|374581420|ref|ZP_09654514.1| DNA mismatch repair protein MutS [Desulfosporosinus youngiae DSM
17734]
gi|374417502|gb|EHQ89937.1| DNA mismatch repair protein MutS [Desulfosporosinus youngiae DSM
17734]
Length = 850
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 260/934 (27%), Positives = 424/934 (45%), Gaps = 176/934 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +K K PD +L +G + FGEDAE+AA +L I A
Sbjct: 3 TPMMQQYRSIKEKAPDAILFFRLGDFYEMFGEDAEVAAPILQIALTGRDAGEGRRIPMCG 62
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ ++ +LVN+G KV + +Q E A G R + + + TL
Sbjct: 63 VPYHAVDNYLSKLVNSGHKVAICEQVEDAK------ESKGIVKRDIIRIVSPGTL----- 111
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
E + YL V + G+ +++STG+ + D
Sbjct: 112 ---TESASERSNRYLASVY-----------------YAEHWGLAFLDLSTGEFTIFQTTD 151
Query: 265 GFLRSGLEAVLLS----LSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ VLL+ ++PAE+LL L+K+ + +AG VR R F
Sbjct: 152 -------QDVLLTEVARINPAEVLLPPDLTKKPK----LWAGYYCTVR----DRQTF--- 193
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+DQ M +G E P +A QA A L
Sbjct: 194 ---------------------KDQTMRDHFEGQR----ELFQEFP-IAAQAAA----GLW 223
Query: 381 QFGLERIMCLGAS----FRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
+ LE + + + ++ M L T + LE+ + + GTLL +++ T
Sbjct: 224 NYILETLPGVDPTHIVEIKTYRSERWMFLDQWTRRNLELTESLRGAGKKGTLLSVLDLTQ 283
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T +G RLL+ W+ PL ++ I RL++V E+ S+S + D +
Sbjct: 284 TAFGGRLLKHWIDKPLLRQDEIEGRLNSVEEL--------VSDSFLRKDLQK-------- 327
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
+LS V D++R + ++ + TA + +++ Q L + E R
Sbjct: 328 ----LLSEVY-------DLERLMGKVSYGTANAKDLLSLTQT----------LALLPEIR 366
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE---AADQGDLLNLMIISNGQF 613
S + S ++ L P V KL S +N + +G+ II G
Sbjct: 367 TLFDSSSAESLKVRLPDLDGFEPFV----TKLQSALNSNPPLSLKEGN-----IIKTGYS 417
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWA 671
EV R KE L L N R++ G+R+L+ + IE+ AN +P ++
Sbjct: 418 QEVDELRLISAGGKEWLAQLENSERERTGIRSLKIGYNKVFGYYIEITHANAHLIPSDYQ 477
Query: 672 KVNSTKKTIRYHSPE-------VLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
+ + R+ +PE ++ A ++L EL + R +E
Sbjct: 478 RKQTLSNAERFITPELKEYELKIIGAEEKLKDLEYELILALR-------EEVRRNTKRII 530
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPN 783
A Q LA +D +LA + ++VRP D QI I GRHPV++ +L FVPN
Sbjct: 531 RAAQVLAEIDVFVSLAEAAVRNHYVRPQLKKDG---QIIIIEGRHPVVEEMLEQGAFVPN 587
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT++ ++ +ITGPNM GKS Y+RQVALI +MA +GSFVPA+ A + ++D I+TR+G
Sbjct: 588 DTHMSGS-QHLALITGPNMAGKSTYMRQVALIVLMAHMGSFVPANKASIALVDRIFTRVG 646
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
ASD + G+STF+ E+ E ++IL + SL+I+DE+GRGT+T+DG++IA+A ++L++
Sbjct: 647 ASDDLAAGQSTFMVEMQEVAHILNYASKNSLIILDEIGRGTATYDGLSIAWAVAEHLVQD 706
Query: 904 KKC--MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
+ LF THY ++ ++ +F G + HV + +D+ +L+K++P
Sbjct: 707 PQFNPKTLFATHYHELTQLQDEFPG-LFNLHVGV-----------KERGEDIVFLHKILP 754
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
G ++ S+G +VA+LA LP I RA + KLE+
Sbjct: 755 GRADRSYGIQVARLAGLPHDLIQRAKTLLLKLES 788
>gi|332663076|ref|YP_004445864.1| DNA mismatch repair protein mutS [Haliscomenobacter hydrossis DSM
1100]
gi|332331890|gb|AEE48991.1| DNA mismatch repair protein mutS [Haliscomenobacter hydrossis DSM
1100]
Length = 872
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 253/926 (27%), Positives = 431/926 (46%), Gaps = 144/926 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FM 141
++K TPL +Q ++K KYPD +L+ VG + FG DA +KVLGI +N
Sbjct: 2 SEKVTPLMEQYNKVKKKYPDAILLFRVGDFYETFGTDAVTTSKVLGIVLTSRNNGGNDVE 61
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFG----RGLSALYTKA 197
A P L++++ RLV AG++V + +Q E K P RG++ + T
Sbjct: 62 LAGFPFHSLDLYLPRLVRAGYRVAICEQLE----------KPSPLKKIVRRGVTEVITPG 111
Query: 198 TLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
A +D ++D N + + FG D G+ ++ISTG+
Sbjct: 112 V--AVDD----------------KLLDHQSN-NFLASLYFGRKDD--FGIAFLDISTGEF 150
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
+ E + ++ + +L +P+E++ + KQ E +
Sbjct: 151 LVSEGDWTYI----DKLLQGFNPSEIIFSKDRRKQFESRF---------------GEKFY 191
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
+ L E + Y+ E L + + QN+ +G +E M + +A A +
Sbjct: 192 LY--TLDEWVFTYDYGREKLLKHFDVQNL----KG---FGVED-MELGQIAAGAALHYLE 241
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG-TLLHIMNHTL 436
+ L+ I +S + + L T++ LE+L S+ E G +LL IM+ T+
Sbjct: 242 TTENKNLKHI----SSITRIYPDRYVWLDRFTIRNLELL---SSPHETGVSLLKIMDQTV 294
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
+ G+RLL++W+ PL + I +RL+ V+ E+ E G+ EK
Sbjct: 295 SPMGARLLKKWIVLPLKSKLAIDSRLEMVAYFLET-------EDKGREVEK--------- 338
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
SL D++R I+++ P E + + +A++ G + L G
Sbjct: 339 -----------SLRLMGDLERLISKVPLGKVNPRELVQLKRALIAVGPLKEMLAGTGHLE 387
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
+ + L+ P ++ + AK + +G +I++G SE+
Sbjct: 388 LEKIADGLNPC-----------PGLVERIAKQIVEEPPVNLAKGG-----VIADGFSSEL 431
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFK--VPLNWAK 672
R + AKE L + ++ G+ +L+ F SV G + +E+ +K P W +
Sbjct: 432 DELRHVINHAKELLLGIQEKEVERSGIPSLKVGFNSVFG--YYLEVTNKYKNQTPAEWIR 489
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ R+ + E+ ++ A E + + + + + Y Q LA
Sbjct: 490 KQTLANAERFITEELKVLEAKILGAEERILDLEERLFQELVLDLADYIHPVQHNATLLAR 549
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAE 790
LDC+ + A ++ + RP E ++I I GRHPV++ L + +VPND L E
Sbjct: 550 LDCILSFAKVATRHQYCRPQL---SEELEIDIREGRHPVIEQQLPLGEMYVPNDVFLDHE 606
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ +ITGPNM GKS +RQ ALI +MAQ+GS+VPA SA L +LD ++TR+GASD+I
Sbjct: 607 HQQILMITGPNMAGKSALLRQTALICLMAQMGSYVPARSAHLGILDKVFTRVGASDNISS 666
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMV 908
G STF+ E+NE + I+ N + +SL+++DE+GRGTST+DG++IA++ +YL + +
Sbjct: 667 GESTFMVEMNETASIMNNISDRSLILLDEIGRGTSTYDGISIAWSIAEYLHNNPFARPKT 726
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ ++ KF+ + YHV+ + Q V +L K+ G S+ SF
Sbjct: 727 LFATHYHELNELSEKFS-RIKNYHVA-----------TKEVGQKVIFLRKLTAGGSQHSF 774
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLE 994
G VA++A +P + RA I +LE
Sbjct: 775 GIHVAKMAGMPKMIVDRANHILEQLE 800
>gi|429087911|ref|ZP_19150643.1| DNA mismatch repair protein MutS [Cronobacter universalis NCTC
9529]
gi|426507714|emb|CCK15755.1| DNA mismatch repair protein MutS [Cronobacter universalis NCTC
9529]
Length = 853
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 258/931 (27%), Positives = 414/931 (44%), Gaps = 166/931 (17%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ ++LK ++PD+LL +G + F +DA+ A+++L I A A
Sbjct: 10 HTPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMA 69
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LVN G V + +Q A GP R + + T T+
Sbjct: 70 GVPHHAVENYLAKLVNLGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEA 123
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L + D GF G ++IS+G E
Sbjct: 124 LLQERQD------NLLAAIWQD------------SKGF----GYATLDISSGRFRLTEPQ 161
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D R + A L +PAELL + ++
Sbjct: 162 D---RETMAAELQRTNPAELLYAEDFAE-------------------------------- 186
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQ------GNHRSAIEGIMNMPD--LAVQALALT 375
MSL E + +D Q G G+ N P A L
Sbjct: 187 ---MSLIEGRRGLRRRPLWEFELDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQY 243
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
++ ++ L I + R G + + A T + LE+ +N + G E TL +++ T
Sbjct: 244 VKDTQRTSLPHIRSITME-RQQDG---IIMDAATRRNLEITQNLAGGVE-NTLASVLDCT 298
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
+T GSR+L+RW+ P+ D N++ R A++ + E ++
Sbjct: 299 VTPMGSRMLKRWLHMPVRDTNVLRHRQQAIAALMEYSAD-------------------IQ 339
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH----- 550
P VL +G D++R + R+ RTA P + +A M+ +A +QL L+
Sbjct: 340 P--------VLRQVG---DLERILARLALRTARPRD-LARMR---HAFQQLPTLNTLLAD 384
Query: 551 IDGEY----REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
ID EY RE++ T LL+R I+ A P V+ + D G
Sbjct: 385 IDAEYVQTLREQMGEFTELRDLLERAIIEA--PPVLVR-------------DGG------ 423
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF 664
+I+ G E+ R A + LD L R++LG+ L+ F +V G + +
Sbjct: 424 VIAPGYHEELDEWRALADGATDYLDRLEIREREKLGIDTLKVGFNAVHGYFIQVSRGQSH 483
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP+++ + + K RY PE+ D++ + + + + +D + AE Q
Sbjct: 484 MVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLAELQ 543
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
+ ALA LD L LA + N+ P D +P + + GRHPV++ +L + F+ N
Sbjct: 544 KSAAALAELDVLTNLAERADTLNYHCPTLTD--KP-GVRLVEGRHPVVERVLNEPFIANP 600
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
+L +R IITGPNMGGKS Y+RQ ALI +MA +GSFVPA AE+ +D I+TR+GA
Sbjct: 601 LSLSPQRRML-IITGPNMGGKSTYMRQTALIVLMAYIGSFVPAEQAEIGPIDRIFTRVGA 659
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A + L
Sbjct: 660 ADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLANRI 719
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
K + LF THY ++ + K G V H+ + + + +++ V G +
Sbjct: 720 KALTLFATHYFELTQLPEKMEG-VANVHLDAI-----------EHGDTIAFMHSVQDGAA 767
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
S+G VA LA +P I RA +LE+
Sbjct: 768 SKSYGLAVAALAGVPKEVIKRARQKLRELES 798
>gi|410027897|ref|ZP_11277733.1| DNA mismatch repair protein MutS [Marinilabilia sp. AK2]
Length = 870
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 250/931 (26%), Positives = 432/931 (46%), Gaps = 154/931 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMT 142
K TPL +Q +K K+P LL+ VG + FGEDA +A+KVL I N
Sbjct: 10 KETPLMKQYNAIKAKHPGALLLFRVGDFYETFGEDAIVASKVLDIVLTKRANGAASHIEL 69
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
A P L+ ++ +LV AG +V + Q E P + G RG++ L T L
Sbjct: 70 AGFPHHSLDSYLPKLVRAGNRVAICDQLED-------PKEVKGIVKRGVTELVTPG-LSF 121
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
++V +NYL + + GK +G+ +++STG+ + E
Sbjct: 122 NDNVLDKR-----RNNYLASL-----HFGK-----------EAIGIAFLDLSTGEFMCAE 160
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ ++ E +L S SP+EL+ + ++ ML + + + C
Sbjct: 161 GSQSYI----EKLLQSFSPSELIFSKAFKQKANDML----------KDQFTTFHC----- 201
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHLK 380
E + + L+N+ N +++G + +L + A + +L+
Sbjct: 202 ---EDWVYQYDYAYEKLTNHFATN-----------SLKGYGIESLELGIVAAGAVLYYLE 247
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ + + + AS ++ + L T++ LE++ +G L+ I++ T+T G
Sbjct: 248 ETEHKEVKHI-ASISRIAEEKYVWLDKFTIRNLELIYPQQDGG--VPLIQILDQTVTPMG 304
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SR++++W+ PL ++ I RL VS + E+ ++G+
Sbjct: 305 SRMMKKWMVLPLKEKKPIDERLKVVSYLFEN-------GALGEQ---------------- 341
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
VL L D++R I+++ P E + QL
Sbjct: 342 ----VLHHLKHIGDLERLISKVAVGRINPRE--------------MNQL----------- 372
Query: 561 SKTLHSAL-LKRLILTASSPAV------IGKAAKLLSTVNKEAADQGDLLNLM--IISNG 611
K L + L ++ L+ ++++P++ I LL + KE D +L II G
Sbjct: 373 KKALKNTLPIRELMKSSANPSLKKLADQINTCNFLLDKIEKELQDDAPMLVHQGGIIKEG 432
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLN 669
+++ R +S K+ L +L ++ G+ +L+ + V G + KVP
Sbjct: 433 VDAQLDEYRSLAKSGKDYLIALQQRELQKTGISSLKVAYNKVFGYYLEVTNAHKDKVPQE 492
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W + + RY +PE+ +++ A E + + + + + + + Y + Q +
Sbjct: 493 WIRKQTLVNAERYITPELKEYEEKILNAEERMIAIEQKYFQALVLDAAEYVTQIQQNARI 552
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNL 787
+A LDCL + A ++R N+ +P D + I GRHPV++ L + +VPND L
Sbjct: 553 MATLDCLLSFAEVARKNNYSQPKISDTD---ALEIKDGRHPVIEKQLPAGEEYVPNDIYL 609
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
E + IITGPNM GKS +RQ ALI +MAQ+GSFVPAS A + ++D ++TR+GASD+
Sbjct: 610 DNENQQIIIITGPNMAGKSALLRQTALIVLMAQMGSFVPASYARIGIIDKVFTRVGASDN 669
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KK 905
+ +G STF+ E+ E + IL N + +SLV++DE+GRGTST+DG++IA++ +++L H K
Sbjct: 670 LSRGESTFMVEMTETASILNNLSDRSLVLMDEIGRGTSTYDGISIAWSIVEFLHNHPKSK 729
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ + F + ++VS K +G V ++ K+ G SE
Sbjct: 730 AKTLFATHYHELNQLAEDFP-KIKNFNVSV----KEVG-------NKVIFMRKLKAGGSE 777
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
SFG VAQ+A +P + RA I LE +
Sbjct: 778 HSFGIHVAQMAGMPNPVVLRAAEIMGHLEKD 808
>gi|262340946|ref|YP_003283801.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272283|gb|ACY40191.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 803
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 236/914 (25%), Positives = 428/914 (46%), Gaps = 136/914 (14%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K+ TPL QQ +KTKYPD +L+ +VG + FG+DA +K+L I + A P
Sbjct: 12 KEVTPLIQQYNNIKTKYPDTILLFQVGDFYEIFGKDAIQCSKILNIVLTKRSHIHLAGFP 71
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDV 205
LN ++ +L+ +G +V + Q E P K RG++ L T +
Sbjct: 72 YHSLNTYLPKLIRSGLRVAICDQLEE-------PKKGKNIVKRGVTELVTPG-------I 117
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
E+ +SN + + ++G I+N LG+ ++ISTG+ E
Sbjct: 118 AINENILETKSNNFLASI----HLG-IKN----------LGLSFLDISTGEFFVTEDT-- 160
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
++ + L +P+E+L + K ++ L + + +I LA
Sbjct: 161 --KNNVLQYLKLFNPSEILFQRKEKKFVDQFLRK--------KYYTFLMEDWIFDYGLA- 209
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHLK---Q 381
YE + +N +++G +N L + + + + +L
Sbjct: 210 ----YEKLTSHFKTN----------------SLKGFGINDLKLGIISSGVILSYLHNTHH 249
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
F ++ I ++ R + M + T Q LE+ +S E L++IM+ T+T G
Sbjct: 250 FNIKHI----SNIRRIKKEEHMWIDNFTFQNLEIF--HSLNKEGVPLINIMDQTITPMGG 303
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL+ W+ PL + I R V ++ + +I
Sbjct: 304 RLLKNWILFPLINIFHIKKRHQIVQKLYSN----------------------------HI 335
Query: 502 LSSVLTS-LGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L + L DI+R I+++ +P E I + L + ++++ + +
Sbjct: 336 LRDFIKKKLKDIHDIERMISKMVIGKISPRE-IYTLHKSLISISEIKKFFLSQD------ 388
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
S +L + + +I + K+++T+ + Q + +I G E+ R
Sbjct: 389 -----SQILTDIANSFQDCKMI--SDKIVNTIQENPPHQIEKGKGNVIIKGFSKELDEIR 441
Query: 621 KAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKK 678
S KE L+ L + + G+ NL+ + ++ G ++ +KVP +W + +
Sbjct: 442 MLYFSQKEYLEKLRKIEQLNTGINNLKIGYNNIFGYFFEVKASKKYKVPSHWIQKQTLAN 501
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
+ RY + E+ ++ A +++ + + ++ + + Q + +A LD L++
Sbjct: 502 SGRYITEELKNYELKILNAEQKILSLEKKIFNDLINQILEKIKHLQKNAKEIAKLDVLYS 561
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD--NFVPNDTNLHAEREYCQI 796
+ L+ N+V+P + + ++IHI GRHPV++ + +++PND L+ + I
Sbjct: 562 FSNLALENNYVKP---EINHSLKIHIIKGRHPVIERQFISKISYIPNDIILNKSDQQIMI 618
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNM GKS +RQ A+I +MA +GSFVPA AE+ ++D I++R+GASD+I G STF+
Sbjct: 619 ITGPNMSGKSAILRQTAIIILMAHIGSFVPAKYAEIGLIDKIFSRVGASDNISLGESTFM 678
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFVTHYP 915
E+NE + IL N + +S +I+DE+GRGTST+DG++IA + +++L E+ + M LF THY
Sbjct: 679 VEMNETASILNNISKRSFLILDEIGRGTSTYDGISIAKSIVEFLHENSLRPMTLFATHYH 738
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ ++ T F + YHVS + D D+ ++ K++ G SE SFG VA++
Sbjct: 739 ELNEMSTIFK-RIKNYHVS-----------AKQIDDDIIFMRKLMVGGSEHSFGIHVAKI 786
Query: 976 AQLPPSCISRATVI 989
+ +P I+RA I
Sbjct: 787 SGMPIKIINRAEEI 800
>gi|344996159|ref|YP_004798502.1| DNA mismatch repair protein mutS [Caldicellulosiruptor lactoaceticus
6A]
gi|343964378|gb|AEM73525.1| DNA mismatch repair protein mutS [Caldicellulosiruptor lactoaceticus
6A]
Length = 863
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 246/948 (25%), Positives = 432/948 (45%), Gaps = 157/948 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +E+K K D +L +G + F EDA +A+K L I +
Sbjct: 5 TPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +L+ G+KV + +Q E + G R ++ + T T
Sbjct: 65 VPYHSATSYIAKLIEKGYKVAICEQVEDPKLAK------GIVKREITRIITPGTF----- 113
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
++ +N++ C+ D + V++STG E
Sbjct: 114 ---IDENISTANNFICCISKDRSE----------------FALTFVDVSTG-----EMYS 149
Query: 265 GFLRSGLEAVLLSL---SPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L L+ +L + +P+E+L+ + +E L + ++ C S F+
Sbjct: 150 CLLEEDLQKLLNEIGKYNPSEILISR-----SEDELYEF------LKKNCTS---FVQMI 195
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++ YE + D+ + I + N+ ++ ++ ++++
Sbjct: 196 EFVDLQKCYEVIENQINVGKIDERL-----------ILSVGNLLKYLIETQKISFDYIRR 244
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
F R+ + + NT + LE+ + S+ +LL I++ T T GS
Sbjct: 245 FEFYRVQNY------------LQIDINTKRNLELTESIIQRSKKNSLLGILDRTKTSMGS 292
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL D I+ RLD+V ++ + Y I
Sbjct: 293 RLLKKWIERPLIDVIEINRRLDSVEQLKSN---------------------------YSI 325
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDGEYREKV 559
L + L R DI+R ++ ++ + +++ ++I L A K+L
Sbjct: 326 LVQIEELLSRMYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLS----------- 374
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA---ADQGDLLNLMIISNGQFSEV 616
+ + LLK + + I A + S++N++A +G II +G EV
Sbjct: 375 ---SFSAQLLKEIYEGLDTLEDI--YALIDSSINEDAPVTLKEGG-----IIKDGFNEEV 424
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVN 674
R R +++KE L R G++NL + IE+ +N+ VP + +
Sbjct: 425 DRLRNISKNSKELLVQYEEKERNLTGIKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQ 484
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ D++ A+++L + + Q +A LD
Sbjct: 485 TLANAERYITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASYIAILD 544
Query: 735 CLHALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAERE 792
L + A ++ + +VRP V + D +I+I +GRHPV++ ++ NF+PNDT L
Sbjct: 545 VLCSFARIAIDNEYVRPNVCLGD----RIYIKNGRHPVVEKMIGRGNFIPNDTELDQAEN 600
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS Y+RQVALI IMAQ+G FVPA A + ++D I++R+GASD I G+
Sbjct: 601 RVLIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQ 660
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLF 910
STF+ E++E + IL+N T +SL+I DE+GRGTST+DG++IA+A L+Y+ + K LF
Sbjct: 661 STFMVEMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLF 720
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFG 969
THY ++ +++ + G V Y V D K + +++ +L K+V G +SS+G
Sbjct: 721 ATHYHELTELEERIPG-VKNYRV------------DVKEEGKNIIFLRKIVRGGCDSSYG 767
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
VA+LA +P + RA I +LE +R R ++++ + ++Q
Sbjct: 768 IHVARLAGIPEEVLKRAGEILKQLEEADINRKNIRKLRKEIKKEFTEQ 815
>gi|227888714|ref|ZP_04006519.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii ATCC 33200]
gi|227850741|gb|EEJ60827.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii ATCC 33200]
Length = 857
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 247/945 (26%), Positives = 415/945 (43%), Gaps = 158/945 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
K TP+ +Q E+K +YPD L VG + F +DA A++L + N
Sbjct: 4 KDTTPMMKQYYEIKEQYPDAFLFYRVGDFYELFEDDAIKGAQILELTLTHRSNKTKNPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ +V LV G+KV + +Q E P KA G RG+ L T T+
Sbjct: 64 MAGVPHLAVDTYVNTLVEKGYKVALCEQLE-------DPKKAKGMVKRGIIQLITPGTM- 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E +D SNYL V+ + GF G+ ++STG+
Sbjct: 116 MQERPDQAKD-----SNYLTSVISTNS------------GF----GLAYSDLSTGETFST 154
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
D G+ LLSL E++ L+ K L A + VE
Sbjct: 155 HLTD---FEGVANELLSLQTREVVYNGRLT-DLNKDFLKKANITVSEPVEVE-------- 202
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
G AE+ + +N+ D + I+ + + ++ HL+
Sbjct: 203 GEHAEISYVAQNLTND-------------------AEIKATKQLVAYLLSTQKRSLAHLQ 243
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+S + + +S LE++++ + G+L +++ T T G
Sbjct: 244 ------------VAQSYEPTQYLQMSHTVQTNLELIKSAKTSKKMGSLFWLLDKTSTAMG 291
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL+ W+ PL I+ R + V + + Y+
Sbjct: 292 GRLLKSWIERPLLSVTEITRRQEMVQALLDD---------------------------YF 324
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA------ILYAGKQLQQLHIDGE 554
V+ SL D++R RI + E + + + IL A + H+
Sbjct: 325 TREKVIDSLKGVYDLERLTGRIAFGSVNAREMLQLAHSLGAIPEILNALLETSNPHLQNY 384
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
++ K +H ++ ++ P G +I G
Sbjct: 385 AKQIDPLKGIHDLIVNTIVDNPPLPTTEGG----------------------LIREGVSE 422
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLN-WA 671
++ R R A+ + K+ L + + R+ G+ NL+ + IE+ + KVP + +
Sbjct: 423 QLDRYRDAMNNGKKWLSEMESHEREVTGINNLKVGYNKVFGYYIEVTNSNKSKVPTDRYT 482
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGGYYAEFQAAVQ 728
+ + RY +P++ + AL E +D F+K + Y Q +
Sbjct: 483 RKQTLTNAERYITPDLK---EHEALILEAEAKSTGLEYDLFVKLREDVKKYIPALQKLAK 539
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNL 787
+A+LD L AT+S N+VRP F D + +I++ +GRHPV++ ++ +++PND +
Sbjct: 540 QIASLDVLTNFATVSEQNNYVRPNFATDKQ--EINVVNGRHPVVEQVMTAGSYIPNDVKM 597
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ +ITGPNM GKS Y+RQ+ALI IMAQ+GSFVPA SA L + D I+TR+GA+D
Sbjct: 598 DQDTNIF-LITGPNMSGKSTYMRQMALIAIMAQIGSFVPADSATLPIFDQIFTRIGAADD 656
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ G+STF+ E++EA+ L++ T +SLV+ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 LISGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAK 716
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ D+ + HV ++ + + +L+K++PG ++ S
Sbjct: 717 ALFATHYHELTDLDQTLK-HLKNIHVGA-----------TEENGKLIFLHKILPGPADQS 764
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLV 1012
+G VAQLA LP + AT + +LE + +S +Q S + DL V
Sbjct: 765 YGIHVAQLAGLPHKVLREATTMLKRLEKQGASELQPASEQLDLFV 809
>gi|229829057|ref|ZP_04455126.1| hypothetical protein GCWU000342_01142 [Shuttleworthia satelles DSM
14600]
gi|229792220|gb|EEP28334.1| hypothetical protein GCWU000342_01142 [Shuttleworthia satelles DSM
14600]
Length = 895
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 256/939 (27%), Positives = 439/939 (46%), Gaps = 168/939 (17%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFM 141
K TP+ + + K + P +L +G + F +DA E+ + G L
Sbjct: 15 KDLTPMMEHYIATKRENPTCILFYRLGDFYEMFFDDAISVSRELELTLTGKACGLPERAP 74
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
+P + ++ RLV G+KV + Q E P +A G RG++ + T T
Sbjct: 75 MCGVPYHAVESYLNRLVQKGYKVAICDQLE-------DPREAKGMVKRGVTRIVTPGTNM 127
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
A + G++ NY++ ++ G+ F G+ A ++STGD
Sbjct: 128 NASSLEEGKN------NYILSII------------YVGNTF----GLSAADVSTGDFFVT 165
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E + L L P+EL+ +S + A RD F
Sbjct: 166 ELDSD---RKLMDELSKYHPSELVCNDSMSMCGLDL--------------DALRDRF--H 206
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE--GIMNMPDLAVQALALTIRH 378
A++ + S Y ++ +++ + H S + G+ + P ++ A AL +++
Sbjct: 207 MAISPLESYY---------FEDEACLNLLREHFHVSDLTALGLKDFPIGSIAAGAL-LKY 256
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L + + + A G M L A T + LE++ + G+LL +++ T T
Sbjct: 257 LIETQKSDLANMSA-ISPYRGGNYMLLDAATRRNLELVETLREKEKRGSLLWVLDKTRTA 315
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G+R+LR + PL D I R DA+ E+ M S E + ++ + P +
Sbjct: 316 MGARMLRSRIEQPLIDEEEIINRYDALDEMLSDMIS---REEIREY---------LNPVY 363
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA---------VMQAIL--YAGKQLQ 547
D++R ITRI ++TA P + +A ++A+L ++ + ++
Sbjct: 364 ---------------DLERLITRITYQTANPRDLVAFASSVAVLPAIRALLADFSSRNMK 408
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
++ D + E + KTL S+ + A P + ++ +G I
Sbjct: 409 RILDDMDPLEDI--KTLISSAI------AEEPPI--------------SSHEGG-----I 441
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK-- 665
I G E+ R R A K+ L L R++ G++NL + +E+ ++
Sbjct: 442 IRAGYNQEIDRLRAAATDGKQWLAELETREREKTGIKNLRIKYNRVFGYYLEVTNSYLNL 501
Query: 666 VPLNWAKVNSTKKTIRYHSPE-------VLTALDQL-ALANEELTIVCRAAWDSFLKEFG 717
VP + + + R+++PE +L + D+L AL NE + C+ G
Sbjct: 502 VPDYFIRKQTLTNAERFYTPELKELENTILGSADRLLALENE---LFCQVR-----DRVG 553
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Q +A+A+LD +LA ++ + F RP ++ + I +GRHPV++ +L
Sbjct: 554 QEVVRIQKTARAIASLDFYQSLAKVAEDNRFCRPRL---NKRGILEIKNGRHPVVEKMLR 610
Query: 778 D-NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
D +F+ NDT L + IITGPNM GKS Y+RQ A+I +MAQVGSFVPA +A + V+D
Sbjct: 611 DGDFIANDTYLDNKSHRLSIITGPNMAGKSTYMRQNAIIVLMAQVGSFVPAEAANISVVD 670
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
I+TR+GASD + G+STF+ E++E + ILRN T++SL+I+DE+GRGTST DG++IA+A
Sbjct: 671 RIFTRVGASDDLASGQSTFMVEMSEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAM 730
Query: 897 LDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVT 954
++Y+ + LF THY ++ +++ + G V Y V+ + K D+ +
Sbjct: 731 VEYIANSRLIGAKTLFATHYHELTELEGRIDG-VNNYCVA----------VKEKGDE-IV 778
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
+L K+VPG ++ S+G +VA+LA +P I RA I+ +L
Sbjct: 779 FLRKIVPGGADRSYGIQVAKLAGVPDGVIERAKEISEEL 817
>gi|110597745|ref|ZP_01386029.1| DNA mismatch repair protein MutS [Chlorobium ferrooxidans DSM
13031]
gi|110340652|gb|EAT59132.1| DNA mismatch repair protein MutS [Chlorobium ferrooxidans DSM
13031]
Length = 875
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 253/929 (27%), Positives = 419/929 (45%), Gaps = 132/929 (14%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S + K+++P+ +Q +E+K +YP+ LL+ VG + F EDA + + L I N
Sbjct: 2 SKEKGTQKEHSPMMRQYLEVKERYPEFLLLFRVGDFYETFFEDARLVSGALNIVLTKRSN 61
Query: 140 FMTASIPTFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSAL 193
+A +P H + +LV GFKV V Q E P +A G R ++ +
Sbjct: 62 GSSAEVPMAGFPHHASEGYIAKLVKKGFKVAVCDQVED-------PAEAKGIVRREITDI 114
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T + ++DD N +G GV ++++
Sbjct: 115 VTPGI------------------TFSDKILDDRHNNYLCAVAFLREGRATIAGVAFIDVT 156
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
T + G+ LLSL P+E+L+ + R E
Sbjct: 157 TAEFSIASMEP----EGVREFLLSLHPSEILIS----------------ASERARFEQLK 196
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ-AL 372
+ C ++ + + E D E+Q +V + +++G + A + A
Sbjct: 197 QSC-------SQELLITEL---DAWMFGEEQTGEVLSRHFKTHSLKGFGIEGNRAGRVAA 246
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+ +++L++ R+ + L G MTL T + LE++ + +G+ G+LL +M
Sbjct: 247 GVILQYLEETRQNRLHYI-TRISELHGDDHMTLDLQTKRNLEIISSMQDGTLNGSLLQVM 305
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+HT G+RL+RRW+ PL I RLDAV E+ G E +G+
Sbjct: 306 DHTCNPMGARLIRRWLQRPLRKIEDIQLRLDAVEELT---GCREMREGLGEK-------- 354
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF--IAVMQAILYAGKQLQQLH 550
LS++ D++R + RI P E + + AI+ + ++L Q
Sbjct: 355 ---------LSAI-------NDLERSLARIATFRTMPREVRQLGISLAIIPSLQELLQ-- 396
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN 610
+ S L S L A + A ++ ++ E+ + + I +
Sbjct: 397 -------EAASARLRS-------LAARLNPLPELARRIEEAIDPESG--ASMRDGGYIRS 440
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPL 668
G +E+ R +AK+ L + R + +L +F V G I + KVP
Sbjct: 441 GFHAELDDLRSISSTAKDRLMEIQQQERLNTSISSLKVQFNKVFGYYIEISRANSDKVPP 500
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA-WDSFLKEFGGYYAEFQAAV 727
+ K + RY P L ++ L EE + A + E G + Q
Sbjct: 501 YYEKKQTLVNAERYTIP-ALKEYEEKILNAEEKSFALEARLFHDLCAEVAGQASLIQTNA 559
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDT 785
+A LD L + A + + +P + DH + I +GRHPVL+ I+ D+ +V ND
Sbjct: 560 SVIAELDALFSFALAAVQYGYCKPE-MSDHR--NLEIINGRHPVLERIMSDDEPYVQNDC 616
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L E++ IITGPNM GKS ++RQ LI ++AQ GSFVPA AE+ ++D I+TR+GAS
Sbjct: 617 -LFDEKQKMLIITGPNMAGKSSFLRQTGLIVLLAQAGSFVPAERAEIGLVDRIFTRVGAS 675
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D++ G STFL E+NEA+ IL N TA SL+++DE+GRGTST DG++IA++ +Y+
Sbjct: 676 DNLASGESTFLVEMNEAASILNNATATSLLLLDEIGRGTSTFDGMSIAWSMSEYIAHAIG 735
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++A+++ + G V T+ +V+ +L K+V G ++
Sbjct: 736 ARTLFATHYHELAELENRIPGVVNYNATVVETADRVI------------FLRKIVRGSTD 783
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+S+G +VA++A +P I RA I A +E
Sbjct: 784 NSYGIEVAKMAGMPAEVIVRAREILAGME 812
>gi|268318972|ref|YP_003292628.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii FI9785]
gi|262397347|emb|CAX66361.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii FI9785]
Length = 857
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 247/945 (26%), Positives = 415/945 (43%), Gaps = 158/945 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
K TP+ +Q E+K +YPD L VG + F +DA A++L + N
Sbjct: 4 KDTTPMMKQYYEIKEQYPDAFLFYRVGDFYELFEDDAIKGAQILELTLTHRSNKTKNPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ +V LV G+KV + +Q E P KA G RG+ L T T+
Sbjct: 64 MAGVPHLAVDTYVNTLVEKGYKVALCEQLE-------DPKKAKGMVKRGIIQLITPGTM- 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E +D SNYL V+ + GF G+ ++STG+
Sbjct: 116 MQERPDQAKD-----SNYLTSVISTNS------------GF----GLAYSDLSTGETFST 154
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
D G+ LLSL E++ L+ K L A + VE
Sbjct: 155 HLAD---FEGVANELLSLQTREVVYNGHLT-DLNKDFLKKANITVSEPVEVE-------- 202
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
G AE+ + +N+ D + I+ + + ++ HL+
Sbjct: 203 GEHAEISYVAQNLTND-------------------AEIKATKQLVAYLLSTQKRSLAHLQ 243
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+S + + +S LE++++ + G+L +++ T T G
Sbjct: 244 ------------VAQSYEPTQYLQMSHTVQTNLELIKSAKTSKKMGSLFWLLDKTSTAMG 291
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL+ W+ PL I+ R + V + + Y+
Sbjct: 292 GRLLKSWIERPLLSVTEITRRQEMVQALLDD---------------------------YF 324
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA------ILYAGKQLQQLHIDGE 554
V+ SL D++R RI + E + + + IL A + H+
Sbjct: 325 TREKVIDSLKGVYDLERLTGRIAFGSVNAREMLQLAHSLGAIPEILNALLETSNPHLQNY 384
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
++ K +H ++ ++ P G +I G
Sbjct: 385 AKQIDPLKGIHDLIVNTIVDNPPLPTTEGG----------------------LIREGVSE 422
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLN-WA 671
++ R R A+ + K+ L + + R+ G+ NL+ + IE+ + KVP + +
Sbjct: 423 QLDRYRDAMNNGKKWLSEMESHEREVTGINNLKVGYNKVFGYYIEVTNSNKSKVPTDRYT 482
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGGYYAEFQAAVQ 728
+ + RY +P++ + AL E +D F+K + Y Q +
Sbjct: 483 RKQTLTNAERYITPDLK---EHEALILEAEAKSTGLEYDLFVKLREDVKKYIPALQKLAK 539
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNL 787
+A+LD L AT+S N+VRP F D + +I++ +GRHPV++ ++ +++PND +
Sbjct: 540 QIASLDVLTNFATVSEQNNYVRPNFATDKQ--EINVVNGRHPVVEQVMTAGSYIPNDVKM 597
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ +ITGPNM GKS Y+RQ+ALI IMAQ+GSFVPA SA L + D I+TR+GA+D
Sbjct: 598 DQDTNIF-LITGPNMSGKSTYMRQMALIAIMAQIGSFVPADSATLPIFDQIFTRIGAADD 656
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ G+STF+ E++EA+ L++ T +SLV+ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 LISGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAK 716
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ D+ + HV ++ + + +L+K++PG ++ S
Sbjct: 717 ALFATHYHELTDLDQTLK-HLKNIHVGA-----------TEENGKLIFLHKILPGPADQS 764
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLV 1012
+G VAQLA LP + AT + +LE + +S +Q S + DL V
Sbjct: 765 YGIHVAQLAGLPHKVLREATTMLKRLEKQGASELQPASEQLDLFV 809
>gi|190346907|gb|EDK39095.2| hypothetical protein PGUG_03193 [Meyerozyma guilliermondii ATCC 6260]
Length = 1198
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 257/956 (26%), Positives = 417/956 (43%), Gaps = 122/956 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+T P P TL IP + K+T E+Q E+K D ++ + G + +
Sbjct: 283 RTMDDPNYDPRTLY-IPQSAWS-----KFTAFEKQYWEIKGVMWDTVVFFKKGKFYELYE 336
Query: 121 EDAEMAAKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTET---AAI 175
DA +A L I N A IP + ++ G+KV V Q E+ +
Sbjct: 337 NDATIANSEFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVDQKESLLAKEM 396
Query: 176 KAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNG 235
+ G + R L+ + T TL D+ D S Y + +
Sbjct: 397 RGGGTKEEKIIKRELTGVLTGGTL---TDLNMLSDDM---STYCLSI------------- 437
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTE 294
FD GVV V+ +T ++ + +F D + LE ++ + P E++ + LS
Sbjct: 438 ---KQFDNWFGVVFVDTATSELNFYQFEDDNECTKLETLVTHVRPKEVICEKHNLSSTAT 494
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
K+L A P++ + F Y+ E +S+ D+ + N+
Sbjct: 495 KILKYTAQPSNQIWNTLNPNTEFWD----------YDTTLEKLVSSKYYDATDLDDFSNY 544
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLE-RIMCLGASFR----SLSGSMEMTLSANT 409
A+ + A A + +LK L+ IM +G + R + + M L T
Sbjct: 545 PDALIAFKDKNQYAFSAFGGLLSYLKFLKLDHNIMTMG-NIREYQITTRSAKNMILDGIT 603
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+L N+ +GS+ GTL ++N + +G R+L+ WV +PL + I+ RLD+V
Sbjct: 604 LNNLEILTNSFDGSDKGTLFKLLNRAQSPFGKRMLKNWVLNPLMVSSDINDRLDSV---- 659
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
Y E D IL L+ L PD++R I R +
Sbjct: 660 ----EYLMGEGAEIKD---------------ILEKSLSGL---PDLERLIARTHSKNIKF 697
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
+F+ +++ LQ L K K +L K L G +L
Sbjct: 698 KDFLKLIEGFEKVCGTLQNL--------KDFVKESCGSLYKYL---------QGFPTELK 740
Query: 590 STVN--KEAADQGDLLNLMII-SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
S VN ++A D+ + LN +++ + G + ++ ++ L+ + +K+ +
Sbjct: 741 SCVNEWEDAFDRSEALNDVVVPATGVDESFDASSDRMKKLEDILNEHLRKYKKEYRSNEI 800
Query: 647 EFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+ +LIE+P K +P +W ++ ST K R+ SPEV +L E +VC
Sbjct: 801 CYKDSGKEIYLIEVPNKVKNIPSDWHQMGSTSKVKRFWSPEVKKLARELMEQRETHKMVC 860
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIH 763
+ F +Y +++ + LA +DC+ AL S + RP FV+ + I
Sbjct: 861 ETLRFRMYERFCKHYKVWKSTIHVLANIDCIIALTKTSETLGQPSCRPQFVEADTGL-ID 919
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
R+P + F+PND +L + + ++TG N GKS +R A+ +M+Q+G
Sbjct: 920 FKDLRNPCF--VTSGEFIPNDVSLGGDEAHFGLLTGANAAGKSTLMRTTAMAVVMSQIGC 977
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
FVPAS A L +D I TR+GA+D+I QG+STF EL+E IL N TA+SLVI+DELGRG
Sbjct: 978 FVPASHARLTPVDKIMTRLGANDNILQGKSTFFVELSETKKILANATAKSLVILDELGRG 1037
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
S+ DG AIA A L +L H + + F THY GS+ V H +
Sbjct: 1038 GSSSDGFAIAEAVLHHLATHVQPLGFFATHY-----------GSL----VLSFEGHPQIR 1082
Query: 944 PMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
P+ ++ +++T+LYK+ G + SFG VA + + + +A V A K E
Sbjct: 1083 PLRMAIVIDQNSRNITFLYKLEDGTAPGSFGMNVAAMCGISSEIVDQAEVAAIKYE 1138
>gi|315606965|ref|ZP_07881971.1| DNA mismatch repair protein MutS [Prevotella buccae ATCC 33574]
gi|315251346|gb|EFU31329.1| DNA mismatch repair protein MutS [Prevotella buccae ATCC 33574]
Length = 889
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 267/939 (28%), Positives = 436/939 (46%), Gaps = 144/939 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT- 142
+ K TP+ +Q ++K+K+P+ LL+ G + + EDA AA+VLGI +N +
Sbjct: 3 VNEKGLTPMMRQFFDMKSKHPEALLLFRCGDFYETYCEDAVEAARVLGITLTRRNNGGST 62
Query: 143 -----ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGL 190
A P L+ ++ +L+ AG +V + Q E K GK G RG+
Sbjct: 63 AVTEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREQIKGKKGLSEMDKMVKRGI 122
Query: 191 SALYTKATLEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
+ L T V G++ E+N+L V FG G GV
Sbjct: 123 TELVTPG-------VAMGDNVLNYKENNFLAAVH-------------FGKG---ACGVSF 159
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRV 309
++ISTG+ + GE ++ E +L + P E+L + + E+ Y G R
Sbjct: 160 LDISTGEFLTGEGTYDYV----EKLLGNFQPKEVLYDRARKQDFER----YFG----TRF 207
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
D ++ A L ++ G +L + V N A IM +L
Sbjct: 208 CTFELDDWVFTDQSAR-QKLLKHFGTKSL-----KGFGVDHLKNGVIASGAIMQYLELTQ 261
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
I L + ++ + L +A +L+ L+ ++ + +LL
Sbjct: 262 HTHIGHITALARIEEDKFVRLDK------------FTARSLELLQPMQEDGL-----SLL 304
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ T+T GSRLLRRW+ PL D I+ RLD V
Sbjct: 305 DVIDRTVTPMGSRLLRRWMVFPLKDVRPINERLDIV------------------------ 340
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
D +P F + +G D++R I+++ +P E + + A L A + +
Sbjct: 341 DYFFKKPDFRACVDEEFHRMG---DLERIISKVAVGRVSPREVVQLKNA-LTAIRPV--- 393
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA-DQGDLLNLM-I 607
K+ + + LKR+ + L ++KE D LLN +
Sbjct: 394 --------KMACLSAGNEALKRV------GEQLSLCESLRDRIDKEIQPDPPQLLNKGDV 439
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFK 665
I++ E+ R + K+ L + ++ G+ +L+ F +V G + +E+ FK
Sbjct: 440 IADNYSPELDELRSISRHGKDYLLEIQQREIEKTGITSLKVGFNNVFG--YYLEVRNTFK 497
Query: 666 --VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
VP W + + + RY + E+ +++ A+E++ ++ ++ + + +
Sbjct: 498 DKVPEEWVRKQTLAQAERYITQELKEYEEKILGADEKIIMLETKLFNELILAMQEFIPQI 557
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFV 781
Q +A LDCL + A S +VRP +D+ E + I GRH V++T L + +V
Sbjct: 558 QIDANLVAHLDCLLSFAKTSEEHRYVRPT-IDESEVLDIK--QGRHAVIETQLPIGEQYV 614
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND L ++ +ITGPNM GKS +RQ ALI ++AQVG FVPA SA + ++D I+TR
Sbjct: 615 PNDVYLDTVKQQVMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAESARIGLVDKIFTR 674
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD+I G STF+ E+ EAS IL N + +SLV+ DELGRGTST+DG++IA+A ++YL
Sbjct: 675 VGASDNISLGESTFMVEMTEASNILNNVSGRSLVLFDELGRGTSTYDGISIAWAIVEYLH 734
Query: 902 EHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
EH K LF THY ++ +++ F + Y+VS + ++ K V +L K+
Sbjct: 735 EHPKARARTLFATHYHELNEMEKNFP-RIKNYNVS-------VKELNGK----VIFLRKL 782
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
G SE SFG VA++A +P S + RA VI +LEA+ S
Sbjct: 783 ERGGSEHSFGIHVAEIAGMPRSIVKRANVILKQLEADNS 821
>gi|291542654|emb|CBL15764.1| DNA mismatch repair protein MutS [Ruminococcus bromii L2-63]
Length = 859
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 257/928 (27%), Positives = 425/928 (45%), Gaps = 158/928 (17%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
QQ ++K + D +L +G + F +DA++A+K L G +P
Sbjct: 3 QQYFKIKEENKDSILFFRLGDFYEMFYDDAKLASKELELTLTGRDCGQAERAPMCGVPFH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDVGG 207
++ RLV G+KV + +QTE P KA G R + + T T+ + +
Sbjct: 63 SCEGYIARLVAKGYKVAICEQTE-------DPAKAKGLVKRDIIRVITPGTVMESSMLDE 115
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF--NDG 265
++ NY+ C+ + +G + +ISTG++ E ND
Sbjct: 116 SKN------NYICCMYSKNKTIG----------------LCFCDISTGELYATEIRGNDS 153
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
+ + L L S +P E+L+G + K E L + + VE + F
Sbjct: 154 Y--NVLTNQLTSYNPREILIGGDIVKLKE--LPKFIKAKLSAGVEMLEDEKFDESVCTDV 209
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLE 385
V S +E D S D+++ V G AL +R ++ GLE
Sbjct: 210 VKSQFE----DEYSTVSDKSVVVCVLG------------------ALLSYLRDTQKTGLE 247
Query: 386 RIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLR 445
RI + M+L NT + LE+ + + G+LL +++ T T G RL+R
Sbjct: 248 RI----NHIEFYKENQYMSLDYNTQRNLELTQTMLTKDKKGSLLWVLDKTKTAMGKRLMR 303
Query: 446 RWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSV 505
W+ HPL + I+ R A+ E+ ++++ + D ++ LS +
Sbjct: 304 SWLEHPLLNITSINNRQSAIEELV--------NDNMLRMDVTDT------------LSGI 343
Query: 506 LTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH 565
DI+R +TRI + +A + ++ AI Q+ L +D
Sbjct: 344 F-------DIERLMTRIVYGSANARDLRSLCGAIQNL-PQISDLLVD-----------CK 384
Query: 566 SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQS 625
S LK I K+ L ++ L++ I+ F+ V +
Sbjct: 385 SVYLK----------YIYKSIDKLEDIHS-------LIDSAIVEEPPFT-VREGGMIKRG 426
Query: 626 AKEELDSL---INMCRKQLGMRNLEFMSVSGITHL-----------IELPANFK--VPLN 669
EELDS+ +N + L E ++GI L IE+ ++K VP
Sbjct: 427 YNEELDSVTGDMNDSKGILARIEAEQRDITGIPKLKVGYNRVFGYYIEVSNSYKSMVPET 486
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY + ++ ++ A + + +D K Q +A
Sbjct: 487 YIRKQTLTNCERYITQDLKDVEGRILGAKDRSVALEYNLFDDVRKTVSDNLERIQKTAKA 546
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
+A LD + +LA ++ + ++RP D + I I RHPV++ +L D FVPND +L
Sbjct: 547 IANLDVITSLANVAADNRYIRP---DVNLSTAIRIKDSRHPVVEALLKDAPFVPNDVSLD 603
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ + IITGPNM GKS Y+RQ+A+I +MAQ+GSFVPASSAE+ ++D I+TR+GASD +
Sbjct: 604 SANDRVAIITGPNMAGKSTYMRQIAIIVLMAQIGSFVPASSAEIGIVDSIFTRVGASDDL 663
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--C 906
G+STF+ E++E + I++N T++SL+I+DE+GRGTST DG++IA A L++ + KK
Sbjct: 664 ASGQSTFMVEMSEVANIIKNATSKSLLILDEIGRGTSTFDGMSIARAVLEFCADRKKLGA 723
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ ++ G V Y+++ K D+T+L ++VPG ++
Sbjct: 724 KTLFATHYHELTVMEQLLDG-VKNYNIAV-----------KKRGDDITFLRRIVPGGADD 771
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLE 994
S+G +VA+LA +P S ISRA I LE
Sbjct: 772 SYGIEVAKLAGIPQSVISRAKEILKDLE 799
>gi|410096844|ref|ZP_11291829.1| DNA mismatch repair protein mutS [Parabacteroides goldsteinii
CL02T12C30]
gi|409225461|gb|EKN18380.1| DNA mismatch repair protein mutS [Parabacteroides goldsteinii
CL02T12C30]
Length = 880
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 266/1007 (26%), Positives = 456/1007 (45%), Gaps = 157/1007 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA + A++LGI N A
Sbjct: 7 TPLMKQYFDIKAKHPDAVLLFRVGDFYEMYGEDAVIGAEILGIVQTKKANGPGQFIEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDTYLPKLVRAGKRVAICDQLEDPKMTKK------LVKRGVTELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + FG G+ ++ISTG+ + E
Sbjct: 120 ILNHK-----ENNFLAAIH-------------FGKDL---CGISLLDISTGEFLTAEGTI 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP R + ++ A
Sbjct: 159 DYI----DKLLNNFSPKEVLIERNNKKRFEEAF----GP----RFFTFEMEDWVFSADAA 206
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ L + E +N+ +G G+ ++ L V A + +L Q
Sbjct: 207 ---------NDRLLKHFETKNL----KGF------GVEHLK-LGVVASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I + A R + + L T++ LE++ + E +LL +++ T++ GSR+L
Sbjct: 247 THISHITALSR-IEEDRYVRLDKFTVRSLELV--GTMNDEGTSLLDVIDKTVSPMGSRML 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
RRWV PL D I R + V D P+ IL
Sbjct: 304 RRWVLFPLKDVKPIQERQNVV------------------------DYFFRHPEVKEILDE 339
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
+ +G D++R I+++ +P E + + KV + +
Sbjct: 340 QIEQIG---DLERIISKVAVGRVSPREVVQL----------------------KVALRAI 374
Query: 565 HSALLKRLILTASSPAV------IGKAAKLLSTVNKEA-ADQGDLLNL-MIISNGQFSEV 616
+K + + P++ + ++ + KE D LLN +I+ G +E+
Sbjct: 375 EP--IKEACMASDEPSLSRVGEQLNACTEIRDRIEKEINNDPPALLNKGGVIAKGINAEL 432
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVN 674
R S K+ L + ++ G+ +L+ F +V G + KVP W +
Sbjct: 433 DELRAIAYSGKDYLLKVQQRESEKTGIPSLKIAFNNVFGYYIEVRNAHKDKVPAEWIRKQ 492
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ +++ A E++ + + + + Q + LD
Sbjct: 493 TLVNAERYITEELKEYEEKILGAEEKILALENRLFTELVTCLAEFIPPIQVNANQIGRLD 552
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAERE 792
CL + A ++ + ++RP VDD + + I SGRHPV++ L + ++ ND L +E++
Sbjct: 553 CLLSFAKVAESNRYIRP-NVDDSDVIDIK--SGRHPVIEKQLPLGEAYIANDVYLDSEKQ 609
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS +RQ ALI +MAQ+G FVPA SA + ++D I+TR+GASD+I G
Sbjct: 610 QIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESARIGMVDKIFTRVGASDNISVGE 669
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLF 910
STF+ E+NEAS IL N +++SLV+ DELGRGTST+DG++IA+A ++Y+ EH + LF
Sbjct: 670 STFMVEMNEASNILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNARAKTLF 729
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ +++ F + Y+VS + V +L K+VPG SE SFG
Sbjct: 730 ATHYHELNEMERSFK-RIKNYNVSV-----------KEVSNKVIFLRKLVPGGSEHSFGI 777
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ-EQEAQENMPVSP 1029
VA++A +P S + R+ I +LE + NR D K + + + + + +
Sbjct: 778 HVAKMAGMPKSIVKRSNEILKQLETD------NRQEGIDCKEKAKGKVKAKPVKEIAAAA 831
Query: 1030 ESFYLGRVEASEDLISAYRDLFLNLKFATHDDNPAKSFQFLKHARSI 1076
E F L + + ++S RD NL ++ P + L R I
Sbjct: 832 EGFQLSFFQLDDPVLSQVRDEIKNLD--VNNLTPIDALNKLSEIRKI 876
>gi|44888187|sp|Q7WLT5.2|MUTS_BORBR RecName: Full=DNA mismatch repair protein MutS
Length = 876
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 268/929 (28%), Positives = 418/929 (44%), Gaps = 141/929 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----F 140
+ K+TP+ QQ + LK + +LL +G + F EDAE AA++L + N
Sbjct: 6 DSKHTPMMQQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERAARLLNLTLTKRGNSNGTPI 65
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGLSALYTKATL 199
A IP + ++ RLV G V + +Q + AA K GP R + + T TL
Sbjct: 66 PMAGIPVHAMEQYLARLVALGESVAICEQIGDPAAAK-------GPVERRIVRIVTPGTL 118
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
+ D + VCV GK + R G+ + +++G
Sbjct: 119 TDEALLPAKAD----RALAAVCVT------GK---------REPRAGLAWLNLASGAFHV 159
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
E G LE+ L ++PAEL+ Q E L A + RV F
Sbjct: 160 TECAPG----QLESELHRIAPAELI-------QAESAELHMAFEGARTRVPDWH---FEA 205
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
GA A++++ ++ D+L + ++M +A+ + A + + + H+
Sbjct: 206 DGARAQLLAHFKT---DSLGGFDVEDMP--------AAVCAAGALLRYAARTQSQALAHV 254
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ ER + L T + LE L +G E TL +++ T
Sbjct: 255 QTIAAER------------PGQYVLLDPVTRRNLE-LTQTLSGEESPTLFSLLDGCRTPM 301
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLRRW+ HPL + + AR A++ T + Q E+
Sbjct: 302 GSRLLRRWLHHPLRENEPVLARQHAIA----------TMLTARQEGEQAFAAAA------ 345
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH-----IDGE 554
+L ++ +L PDI+R R+ R+ P E ++ A++ L LH + G
Sbjct: 346 -LLETLRDALNAFPDIERIAARVALRSVRPRELASLRDALV----ALPALHASLAPLSGS 400
Query: 555 YREKVTSKTLH-----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
R + + L LL R + AS PAV + D G +I+
Sbjct: 401 PRARELAAQLAMPPDIGELLARAV--ASEPAVAIR-------------DGG------VIA 439
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVP 667
G SE+ R + L L R++ G+ NL EF V G + KVP
Sbjct: 440 AGFDSELDELRALATDGGDFLVQLEARERERTGIGNLRVEFNRVHGFYIEVSKGQTDKVP 499
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
++ + + K RY +PE+ T D++ A + + ++ L Y
Sbjct: 500 EDYRRRQTLKNAERYITPELKTWEDRVLSAQDRSLAREKWLYEQLLDALAQYVRPLSQCA 559
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNL 787
ALA LD L ALA +R ++V P +D E I I +GRHPV++ + + F PN L
Sbjct: 560 SALAELDTLAALAEHARRHDWVAPELIDGAE---IDIEAGRHPVVERAI-ERFTPNGCRL 615
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
R +ITGPNMGGKS Y+RQVALI ++A+ GSFVPA+ A + LD I+TR+GA+D
Sbjct: 616 DQTRRML-LITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDRIFTRIGAADD 674
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ GRSTF+ E+ EA+ IL T SLV++DE+GRGTST+DG+A+A+A LL H + +
Sbjct: 675 LAGGRSTFMMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIAYRLLTHNRAL 734
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ T+ T +L + + G + +L++V G + S
Sbjct: 735 TLFATHYFEL----TRLPAEQPTAANVHLAAAESAG--------GIVFLHEVREGPASRS 782
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+G +VAQ A +P + I +A+ +LEA+
Sbjct: 783 YGIQVAQRAGVPAAVIRQASRELERLEAQ 811
>gi|333377034|ref|ZP_08468770.1| DNA mismatch repair protein mutS [Dysgonomonas mossii DSM 22836]
gi|332886247|gb|EGK06491.1| DNA mismatch repair protein mutS [Dysgonomonas mossii DSM 22836]
Length = 870
Score = 276 bits (705), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 251/927 (27%), Positives = 423/927 (45%), Gaps = 150/927 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMT-AS 144
TPL +Q E+K+K+PD +L+ VG + F +DA AA++LGI N F+ A
Sbjct: 8 TPLMKQYFEIKSKHPDAILLFRVGDFYETFSDDAIDAAEILGITLTRRGNGTAQFVELAG 67
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAE 203
P L+ ++ +LV AG +V + Q E P + RG++ L T
Sbjct: 68 FPHHALDTYLPKLVRAGRRVAICDQLE-------DPKQTKNLVKRGITELVTPG------ 114
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
V ++ + N +C + N GV ++ISTG+ + E
Sbjct: 115 -VSINDNILNHKENNFLCAIHFAKNT---------------CGVSFLDISTGEFLVAEGT 158
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ + +L + SP E+L L + +KM G S + F A
Sbjct: 159 KEYI----DKLLTNFSPKEVL----LERSKKKMFEESFG--SRFFIFQLDDWVFTEDTAK 208
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
++ +E + V N A I++ D+ I H+
Sbjct: 209 GRLLKHFETRNL--------KGFGVEHLTNGVIAAGTILHYLDVTQHT---HIGHI---- 253
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
S + + L T++ LE++ + G + +LL I++ T++ G+R+
Sbjct: 254 --------TSLSRIEEDKYVRLDKFTVRSLEIISTMNEGGK--SLLDILDKTVSPMGARM 303
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LRRW+ PL D I++RL V + + + +L
Sbjct: 304 LRRWLVFPLKDVKPINSRLSVVEYFFKDI------------------------ELKTLLE 339
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
L +G D++R I+++ +P E + + KV K
Sbjct: 340 EQLALIG---DLERIISKVAVNRVSPREIVQL----------------------KVALKA 374
Query: 564 LHSALLKRLILTASSPAV--IGKAAK----LLSTVNKEAA-DQGDLLNL-MIISNGQFSE 615
+ ++ L + P++ IG+ + + KE D L+N II G E
Sbjct: 375 IEP--IRNAFLASDEPSLREIGERLNPCPVIHDRIEKEVQPDPPSLINKGNIIRKGVNPE 432
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKV 673
+ R S K+ L + + G+ +L+ F +V G + KVP W +
Sbjct: 433 LDELRDIAYSGKDYLLKIQQRETEATGISSLKISFNNVFGYYIEVRNTHKDKVPEGWIRK 492
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY + E+ +++ A E++ + ++ + Y QA +A
Sbjct: 493 QTLVNAERYITQELKEYEEKILGAEEKIQALESNLFNELVLSIVEYIPAIQANASLIAQT 552
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAER 791
DCL + + +++ ++RP ++D + ++I +GRHPV++ L ++++ ND +L + +
Sbjct: 553 DCLLSFSKVAKENKYIRPE-INDTDVLKIK--NGRHPVIEKQLPLGESYIANDVSLDSNK 609
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
+ IITGPNM GKS +RQ ALI +MAQ GSFVPA SA++ ++D I+TR+GASD+I G
Sbjct: 610 QQIIIITGPNMAGKSALLRQTALITLMAQAGSFVPAESAQIGLVDKIFTRVGASDNISVG 669
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVL 909
STF+ E+NEAS IL N + +SLV+ DELGRGTST+DG++IA+A ++Y+ EH K L
Sbjct: 670 ESTFMVEMNEASDILNNLSPKSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKARAKTL 729
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ +++ F + ++VS + D V +L K+VPG SE SFG
Sbjct: 730 FATHYHELNEMEKSFK-RIKNFNVSV-----------KEIDNKVIFLRKLVPGGSEHSFG 777
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAE 996
VA++A +P S + RA I +LE++
Sbjct: 778 IHVAKMAGMPQSIVKRANSILKQLESD 804
>gi|406981178|gb|EKE02687.1| hypothetical protein ACD_20C00346G0014 [uncultured bacterium]
Length = 863
Score = 276 bits (705), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 261/950 (27%), Positives = 452/950 (47%), Gaps = 163/950 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------AHLDHNFMTA 143
TP+ +Q +E K +Y ++L +G + F EDA +AAK L I L M A
Sbjct: 19 TPMLRQYLETKKQYQGIILFYRMGDFYETFFEDAVIAAKDLEITLTSREGGKLGRVAM-A 77
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAA 202
IP ++ ++ RL+ G KV + +Q E P +A G R + + T T+
Sbjct: 78 GIPAKAIDNYLSRLIEKGHKVAICEQME-------DPSQAKGLVDRQVVRVITAGTITET 130
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ ++ NYL V+ K F G+ ++IST GEF
Sbjct: 131 NLLESTKN------NYLAAVI-------KTSKSEF-------FGLAYIDIST-----GEF 165
Query: 263 NDGFLRSGLEAV---LLSLSPAELLLGQPLSKQT--------EKMLLAYAGPASNVRVEC 311
++ L+ + L +SP+E+L P+ KQ E+++ SN
Sbjct: 166 R--ITKATLDQLIDELSRISPSEIL--APVKKQAIQAFQIVPEEVIDLPEVITSNYSCTK 221
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
F ++ ++ ++ N+ E + + GIM A A
Sbjct: 222 RGYSSFSQEKSVEKIKEVF--------------NVTSLESFGYPNHTLGIM-----AAGA 262
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+ + ++ G+ L + SM+ ANT + LE+++ + + G+LL
Sbjct: 263 IVEYLEETQKQGIPEFDTLIPYMLTSYVSMD----ANTRRNLELVQTVRDNNYKGSLLWA 318
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T T G RLLR+W+ PL D N I +R +AV E+ E NS +
Sbjct: 319 IDKTCTNMGLRLLRKWIQQPLKDVNKIKSRQNAVEELLE-----------------NSKL 361
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQ 548
+ + + L ++ DI+R TRI + TA +FIA+ ++ + GK L
Sbjct: 362 RL----------EISSLLDKTYDIERLATRISNNTANARDFIALKDSLKLLPEFGKLLSN 411
Query: 549 -----LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
L + E +E++ S++++R I A +P V +G+L
Sbjct: 412 AKSPFLSVFAEVKEELVD---FSSIVERTI--AENPPV--------------GLKEGNL- 451
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-A 662
I G E+ ++ + +E L N +++ G+R+L+ + IE+ A
Sbjct: 452 ----IRRGVSEELDYLKELLTGGREWLTKFENDEKEKTGVRSLKVGYSKTFGYFIEVTHA 507
Query: 663 NFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
N VP + + + RY +PE L + L+ E +I S L+E+ +
Sbjct: 508 NTNLVPDYYIRKQTLTNAERYITPE-LKEHETEVLSAETRSIDLEYQIFSDLREYAKEFV 566
Query: 722 E-FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDN 779
+ + +AL ALD L + A ++ N+V+P + E + I GRHPV++ +L L
Sbjct: 567 QPMREIAKALCALDVLLSFANVAVEFNYVKP---EIDESYDLLIKEGRHPVIEKLLPLGK 623
Query: 780 FVPNDTNLH----AEREYCQ--IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
+VPND + + CQ I+TGPNM GKS Y+RQ ALI I+AQ+GSFVPA +A++
Sbjct: 624 YVPNDLDSKGGDVGSQNTCQFMILTGPNMAGKSTYMRQNALIVILAQIGSFVPAKAAKIG 683
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
++D I+TR+GA D + G+STF+ E+NE + IL + T +SL+++DE+GRGTST+DGVAIA
Sbjct: 684 IVDKIFTRVGAVDDLSTGQSTFMVEMNETALILNSATDRSLILLDEIGRGTSTYDGVAIA 743
Query: 894 YATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDV 953
++ +Y++E+ K +F THY ++ + ++ + Y V+ +++ ++
Sbjct: 744 WSVAEYIVENIKARTIFATHYHEMNVMCERYP-QIANYQVTV-----------RENNHEI 791
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+L +V+PG + S+G +VA++A LP S ISRA + ++++ + ++++ N
Sbjct: 792 EFLRQVIPGGTNRSYGIQVAKMAGLPNSVISRAENLMSRMQKDYTAKLPN 841
>gi|429761467|ref|ZP_19293892.1| DNA mismatch repair protein MutS [Anaerostipes hadrus DSM 3319]
gi|429183720|gb|EKY24761.1| DNA mismatch repair protein MutS [Anaerostipes hadrus DSM 3319]
Length = 875
Score = 276 bits (705), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 247/935 (26%), Positives = 429/935 (45%), Gaps = 160/935 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ QQ +++K + D +L +G + F +DA A+K L G L+
Sbjct: 6 KLTPMMQQYMQIKEENKDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLEERAPM 65
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P ++ ++ +LV G+KVG+ +Q E P +A G R + + T T +
Sbjct: 66 CGVPYHAVDSYLNKLVEKGYKVGICEQVE-------DPSQAKGIVKREIVRIVTPGTNIS 118
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ + ++ NYL+C+ +DG+ G IS DV G+
Sbjct: 119 QQSLDDEKN------NYLMCIFANDGSYG---------------------ISFVDVTTGD 151
Query: 262 FNDGFLRS--GLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
F + S + + PAE++ C D F+
Sbjct: 152 FRTTSMDSLAKVRDEIFKFEPAEIV--------------------------C--NDAFLI 183
Query: 320 GGA----LAEVMSLYENMGEDTLSNNEDQNMDVPEQ---GNHRSAIEGIMNMPD--LAVQ 370
G L + MS+ + E + E + Q GN G+++ P +A
Sbjct: 184 SGMDFDYLKDKMSIVISSIEPYHFDEEQAEERIKRQFKVGNLEGL--GLVDHPMGVIATG 241
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
AL + ++ L+ +M + A S M + +++ + LE+ + + G+LL
Sbjct: 242 ALLGYLHETQKSSLDHLMHIEA----YETSEFMIIDSSSRRNLELCETLRDKQKKGSLLW 297
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++ T T G+R+LR V PL D+ I R DA++ + +D
Sbjct: 298 VLDKTKTAMGARMLRNMVEQPLVDKKKIEERYDAITTL--------------------TD 337
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIA------VMQAILYAGK 544
TIV + L+ + D++R +T++ ++TA P + IA ++ AI +
Sbjct: 338 QTIVREELREYLNPIY-------DLERLMTKVSYKTANPRDMIAFKTSLELLPAIKTVLE 390
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+ + + G + + +H+ L +I P I +
Sbjct: 391 ECKDPLLSGLREDLDPLEDIHNLLEDSII--EEPPLAIKEGG------------------ 430
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
II G ++ + ++A K+ L L R++ G++NL+ + +++ ++
Sbjct: 431 --IIKEGFKEDIDKLKRAKTEGKQWLMELEEREREKTGIKNLKIKFNKVFGYYLDVTNSY 488
Query: 665 K--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
K VP + + + + RY + E+ D + + + L + + + G
Sbjct: 489 KDLVPDYYIRKQTLANSERYTTEELNQLADTILGSEDRLYALEYETYVMIRETLAGEMER 548
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFV 781
+A +D L +LA ++ +FVRP + I I GRHPV++ ++ D F+
Sbjct: 549 ISRTANVIAQIDALASLAYVAERNHFVRPKL---NVRGTIDIKDGRHPVVEQVIPNDMFI 605
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
NDT L ++ IITGPNM GKS Y+RQVALI +MAQ+GSFVPA+ A + ++D I+TR
Sbjct: 606 SNDTYLDNKKNRVAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAAKANIGIVDRIFTR 665
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD + G+STF+ E++E + ILRN T SL+I+DE+GRGTST DG++IA+A ++Y+
Sbjct: 666 VGASDDLASGQSTFMVEMSEVANILRNATKNSLLILDEIGRGTSTFDGLSIAWAVVEYIS 725
Query: 902 EHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
K LF THY ++ T+ G + + H +Y + K G D+ +L K+
Sbjct: 726 NSKLLGAKTLFATHYHEL----TELEGKIDSVH-NYCIAVKEQG-------DDIVFLRKI 773
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
V G ++ S+G +VA+LA +P + I+RA IA +LE
Sbjct: 774 VKGGADKSYGVQVAKLAGVPDAVINRAKEIARELE 808
>gi|338729931|ref|YP_004659323.1| DNA mismatch repair protein MutS [Thermotoga thermarum DSM 5069]
gi|335364282|gb|AEH50227.1| DNA mismatch repair protein MutS [Thermotoga thermarum DSM 5069]
Length = 810
Score = 276 bits (705), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 257/931 (27%), Positives = 422/931 (45%), Gaps = 149/931 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP+ QQ +++K++Y D +L+ +G + F EDA +K L + A +P
Sbjct: 2 KLTPMMQQYLQIKSQYKDAILLFRLGDFYEAFFEDAYTVSKALDLVLTQRQGAPMAGVPY 61
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
LN +++RLV G+KV + +Q E A G R ++ + T TL ED
Sbjct: 62 HALNSYLKRLVQLGYKVAICEQMEDPA------TAKGLVKRQVTRIVTPGTL--VEDELL 113
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
D +NYL V+ D + V AV++STGD + FND
Sbjct: 114 ESDS----NNYLAVVLKDQE----------------KYHVAAVDVSTGDSLVACFND--- 150
Query: 268 RSGLEAVL--LSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
LE+V L+ A +L P K T + + NV VE G +
Sbjct: 151 ---LESVFDFLNSIKATQILCDPSLKSTFQSVF-------NVLVEPLQDWHLNPHGMEQD 200
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLE 385
V ++ + D L E+ ++A A +R+L+ +
Sbjct: 201 VAKVFNVVTIDHLELKEN-------------------------LKAFAALVRYLRYTMMV 235
Query: 386 RIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLR 445
+ L + + + L + T++ L ++ +L ++N+T T GSRLL+
Sbjct: 236 ENLMLKPP-KIIRDERFVILDSTTVEHLNLIEPKGK-----SLFDVLNYTKTSMGSRLLK 289
Query: 446 RWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSV 505
W+ PL D+ I++RLD V VE Q +LS +
Sbjct: 290 SWILQPLRDQKEITSRLDKVQ-------------------------AFVEDQI--LLSEL 322
Query: 506 LTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH 565
L D+ R +R+ + ATP + +A ++ L Q+QQL + + + +
Sbjct: 323 REYLHTVKDLHRIASRLRYGKATPKDLVA-LRTTLEVCPQIQQLLLTNDAFLEAENLDCL 381
Query: 566 SALLKRLI--LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
+ L + L L VIG+ + +KE + DL V + K +
Sbjct: 382 TDLCEELAKALEDEPSNVIGEGKVIRQGYDKEFDELKDL-------------VYNSEKFL 428
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKTIR 681
++ L N+ ++G + SV G + IE+ + KVP ++ + + R
Sbjct: 429 AEYEQRERVLTNIPNLRVG-----YNSVFG--YYIEVTKSHLSKVPPHYIRRQTLVNAER 481
Query: 682 YHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALAT 741
+ + E+ +++ A E L + +DS ++ + A +A +D L +LA
Sbjct: 482 FVTEELKQFEEKMLHAKELLEKKEKELFDSLCQKALEKVDKIIAIADFIANIDALQSLAY 541
Query: 742 LSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPN 801
+ + RP F +D + V + RHP+ + +NFVPND L + + I+TGPN
Sbjct: 542 AANLNKYTRPKFSNDGKLV---LVKSRHPIAEK-FTENFVPNDLTLSNQESFV-ILTGPN 596
Query: 802 MGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNE 861
M GKS ++RQV LI +MAQ+GSFVPA A L + D I+ +MG D I G+STFL E+NE
Sbjct: 597 MSGKSTFVRQVGLIALMAQIGSFVPAEEAVLPIFDRIFVKMGVRDDIIGGKSTFLTEMNE 656
Query: 862 ASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIK 921
+ I+ T SLV++DE+GRGTST DG++IA+A +YL KC +F TH+ ++ ++
Sbjct: 657 IAKIIYQATKDSLVLLDEVGRGTSTFDGISIAWAISEYLHTKIKCKCIFATHFTELTELA 716
Query: 922 TKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPS 981
+ G V +K + M+ S V +L+KVV GV++ S+G VA +A +P
Sbjct: 717 NLYDGIV----------NKTIQVMEQGS--QVIFLHKVVDGVADKSYGIDVAAIAGIPAE 764
Query: 982 CISRA----TVIAAKLEAEVSSRVQNRSAKR 1008
+ RA VIA+K +E+ R++ S +R
Sbjct: 765 IVQRAREVLDVIASK--SELEDRLKVVSTER 793
>gi|311745087|ref|ZP_07718872.1| DNA mismatch repair protein MutS [Algoriphagus sp. PR1]
gi|126577600|gb|EAZ81820.1| DNA mismatch repair protein MutS [Algoriphagus sp. PR1]
Length = 868
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 255/942 (27%), Positives = 436/942 (46%), Gaps = 154/942 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---------AHLDH 138
K TPL +Q +K K+P LL+ VG + FGEDA A+KVL I +H++
Sbjct: 8 KETPLMKQYNAIKAKHPGALLLFRVGDFYETFGEDAVKASKVLDIVLTKRANGSASHIE- 66
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGPFGRGLSALYTKA 197
A P L+ ++ +LV AG +V + Q E ++K G RG++ L T
Sbjct: 67 ---LAGFPHHSLDTYLPKLVRAGNRVAICDQLEDPKSVK-------GIVKRGVTELVTPG 116
Query: 198 TLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
L + V + +NYL + + GK ++G+ +++STG+
Sbjct: 117 -LSFNDQVLDTK-----RNNYLASI-----HFGKDKHGI-----------AFLDLSTGEF 154
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
+ E N +L E ++ S +P+E++ + K +++L +D +
Sbjct: 155 MCAEGNSSYL----EKLVQSFAPSEIIFSKAAKKSAQELL----------------KDDY 194
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
I V Y+ E ++ + N+ +G GI + +L A +
Sbjct: 195 ITFHCEDWVYQ-YDFTYEKLKTHFKTANL----KGF------GIEDQ-ELGTVAAGAVLH 242
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+L++ + I + A R ++ + L T++ LE++ G L+ I++ T+T
Sbjct: 243 YLEETEHKEIQHISAISR-IAEEKYVWLDKFTIRNLELVYPQHEGG--VPLIQILDQTVT 299
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
GSR++++W+ PL ++ I RL+ V
Sbjct: 300 PMGSRMMKKWMVLPLKEKTAIEERLNVVD------------------------------- 328
Query: 498 FYY----ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
F+Y ++ +++ L D++R I+++ A P E + +A L A ++++
Sbjct: 329 FFYQNSTLIEEIVSELKHIGDLERLISKVVVGRANPREINQIKKA-LKAIIPIKEM---- 383
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM--IISNG 611
K + LKRL + LL + E + +L II +G
Sbjct: 384 -------LKGQDNPTLKRL------SDQLNLCEYLLEKIENELKEDAPMLTHQGGIIKDG 430
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLN 669
E+ R S K+ L L K G+ +L+ F V G + KVP
Sbjct: 431 VDDELDEYRNLANSGKDFLVQLQQREVKNTGITSLKIAFNKVFGYYLEVTHAHKDKVPQE 490
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W + + RY +PE+ +++ A E L + + + ++E Y + Q +
Sbjct: 491 WIRKQTLVNAERYITPELKEYEEKILNAEERLVGLEQKYFLELVQEAAKYVTQIQQNARI 550
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNL 787
+ +D L + A ++ ++ RP + D E ++ GRHPV++ L +N+VPND L
Sbjct: 551 IGTMDVLLSFAQIALTNDYSRPK-ISDTETLEYK--DGRHPVIERQLSPGENYVPNDVYL 607
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ + IITGPNM GKS +RQ ALI +MAQ+GSFVPAS A + ++D ++TR+GASD+
Sbjct: 608 DHDSQQIMIITGPNMAGKSALLRQTALIVLMAQMGSFVPASFARVGIIDKVFTRVGASDN 667
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--K 905
+ +G STF+ E+ E + IL N +++SLV++DE+GRGTST+DG++IA++ ++YL H K
Sbjct: 668 LSKGESTFMVEMTETASILNNLSSRSLVLMDEIGRGTSTYDGISIAWSIVEYLHNHTTFK 727
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ + F + ++VS K +G V ++ K+ PG SE
Sbjct: 728 AKTLFATHYHELNQLTEDFP-KIKNFNVSV----KEVG-------NKVIFMRKLKPGGSE 775
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
SFG VAQ+A +P + RA I A LE + + Q + K
Sbjct: 776 HSFGIHVAQMAGMPNPVVLRAAEIMAHLEKDKALNEQKENFK 817
>gi|85818143|gb|EAQ39303.1| DNA mismatch repair protein MutS [Dokdonia donghaensis MED134]
Length = 863
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 256/940 (27%), Positives = 424/940 (45%), Gaps = 189/940 (20%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASIPTFR 149
QQ +K KYPD LL+ VG + FGEDA AA +L I +N A P
Sbjct: 2 QQYNGIKAKYPDALLLFRVGDFYETFGEDAVKAAAILNITLTNRNNGGERTELAGFPHHS 61
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDVGGG 208
LN ++ +LV AG +V + Q E P + RG++ L T V
Sbjct: 62 LNTYLPKLVKAGCRVAICDQLED-------PKQTKKIVKRGVTELVTPG-------VAMN 107
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D ++N + V + + ++GV +++STG+ + + + ++
Sbjct: 108 DDILSAKTNNFLGAVYFEKD---------------KVGVSFLDVSTGEYLTAQGDVAYV- 151
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMS 328
+ +L + +P+ELL+ SK +K + GP + +
Sbjct: 152 ---DKLLQNFTPSELLV----SKAQKKKFIESYGP---------------------DYHT 183
Query: 329 LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-- 386
Y+ ED + + +D + H+ ++ LK FG+E
Sbjct: 184 FYQ---EDWVFH-----IDYARESLHKH-----------------FDVKSLKGFGVEHLT 218
Query: 387 --IMCLGASFRSLSGSMEMTL---------SAN--------TLQQLEVLRNNSNGSEYGT 427
++ GA+ L + L +A+ T++ LE L N+++G + T
Sbjct: 219 AGVIAAGAALHYLGETQHHKLQHITSISRIAADDYVWMDRFTIRNLE-LYNSASGVKAIT 277
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
L+ I++ T + G RLL+RW+ PL + I R + VS ++ D
Sbjct: 278 LIDIIDKTTSAMGGRLLKRWLALPLKRVDEIKRRHEVVSFLS---------------DNG 322
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAI----- 539
N I + + + D++R I+++ +P E I + ++AI
Sbjct: 323 N------------IFDKMQGHIKQIGDLERLISKVATAKISPREVIQLKNSLEAIVPIKT 370
Query: 540 LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
L +G + L I GE + + L S + + L +P I K + +KE D
Sbjct: 371 LASGTDNESLKIIGEQLQ--NCEVLRSKI--KETLREEAPVSIVKGGAIAPGFHKELDD- 425
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIE 659
R Q K+ L+ ++ ++ G+ +L+ S + + IE
Sbjct: 426 -------------------LRALSQGGKDYLEKMLERETERTGITSLKIASNNVFGYYIE 466
Query: 660 LPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+ K VP W + + RY + E+ ++ A E + + + + + G
Sbjct: 467 VRNTHKDKVPEEWIRKQTLVNAERYITDELKEYEGKILGAEERIQGIEQQLFAELVSWVG 526
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
G+ + QA +A LDCL L+R N+VRP E I I GRHPV++ L
Sbjct: 527 GFIPQVQANATQIAQLDCLLGFTQLARENNYVRPTL---DESQVIDIKEGRHPVIEKQLP 583
Query: 778 --DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
+ +V ND L + + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA +A + ++
Sbjct: 584 LGEAYVTNDVYLDSADQQMIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAQAAHIGLV 643
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D I+TR+GASD+I G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A
Sbjct: 644 DKIFTRVGASDNISMGESTFMVEMNETASILNNLSDRSLVLLDEIGRGTSTYDGISIAWA 703
Query: 896 TLDYLLEHK-KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVT 954
+YL EH+ + LF THY ++ ++ F + Y+VS + +V
Sbjct: 704 ISEYLHEHRGRPKTLFATHYHELNEMCETFE-RIKNYNVSV-----------KELKDNVL 751
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+L K+VPG S SFG VA++A +P + RAT + KLE
Sbjct: 752 FLRKLVPGGSAHSFGIHVAKMAGMPQQVLRRATKMMGKLE 791
>gi|256822659|ref|YP_003146622.1| DNA mismatch repair protein MutS [Kangiella koreensis DSM 16069]
gi|256796198|gb|ACV26854.1| DNA mismatch repair protein MutS [Kangiella koreensis DSM 16069]
Length = 864
Score = 275 bits (704), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 246/920 (26%), Positives = 413/920 (44%), Gaps = 135/920 (14%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHN 139
H ++TP+ +Q +LK + D LL +G + F +DA+ AA++L I +
Sbjct: 12 HLDQHTPMMRQYWQLKQDHMDYLLFYRMGDFYELFYDDAKRAAELLDITLTKRGSSAGEP 71
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
A +P ++ ++ R+V G V + +Q A GP R + + T TL
Sbjct: 72 IPMAGVPFHAVDSYLARIVKLGESVAICEQIGDPATSK------GPVDRKVVRIVTPGTL 125
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
E+ S+ L+ K RN G+ +++++G
Sbjct: 126 Y-------DENLLDALSDKLLAAA------YKKRN---------HYGLACLDMASGRFWL 163
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
EF++ ++ +A L + PAEL+L + T+ + A +RD +
Sbjct: 164 SEFDN---KNAFQAELFRIKPAELILADNQQELTQGLTTANKWQPDWAFDFEQNRDKLLN 220
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
A V SL ED +LA+ A + +
Sbjct: 221 HFA---VQSLASFGCEDY----------------------------ELAICAAGAVLDYA 249
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
K L + + + L S ++ L T + LE L N G + TL +MN T T+
Sbjct: 250 KTTQLNNLPHIHL-LQKLEHSDQLVLDPATRRNLE-LTENIQGGQNNTLFEVMNSTKTVM 307
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G+RLL+RW+ PL + + RLD+V + HD ++P
Sbjct: 308 GARLLKRWLHAPLSSHDNVQKRLDSVENLT--------------HDHA---FVSIQP--- 347
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG---KQLQQLHIDGEYR 556
ILS + DI+R +TRI +A P + + Q + + +LQQL+I +
Sbjct: 348 -ILSEI-------ADIERIVTRIALASANPRDLKRLQQGLTQSTLLLDELQQLNIKLDQA 399
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
+ + LL+ L P VI D G +I+ G +E+
Sbjct: 400 QYIQPLPELQQLLEH-ALVEQPPMVI--------------RDGG------VIAQGFNAEL 438
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVN 674
R A E + SL +++ G+ L+ + V G I + + P ++ +
Sbjct: 439 DELRSLADDANEFMLSLERREKQESGINTLKVGYNKVHGFYIEISRAQSHQAPAHYIRRQ 498
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K R+ +PE+ +++ + + + +D ++E + A+ Q+ A+A +D
Sbjct: 499 TLKNAERFITPELKEYEEKVLTSKTRALALEKRLYDELIQELQQHVAKIQSTASAIAEID 558
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L + + N F RP + I I GRHPV++ + F+PN+ N++ +E
Sbjct: 559 VLACFSERATNLGFNRPTLSNKD---GIEIKQGRHPVVEFHSKEPFIPNNLNIN-NQERS 614
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNMGGKS Y+RQ ALI ++A VGS+VPA AE+ +D I+TR+GASD + GRST
Sbjct: 615 LIITGPNMGGKSTYMRQTALITLLAYVGSYVPAEHAEIGPIDRIFTRIGASDDLASGRST 674
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E++E + IL N T+ SL+++DE+GRGTST DG+A+A AT+ Y+ E + LF THY
Sbjct: 675 FMVEMSETANILNNATSNSLILLDEIGRGTSTFDGLALASATIQYIHEKLQSYTLFATHY 734
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ ++ V + + T HK G + + + +++ G + S+G +VAQ
Sbjct: 735 FELTQQAEQWDAMVNLHFSA--TEHKDAG------QEKLIFSHQIQAGPANQSYGIQVAQ 786
Query: 975 LAQLPPSCISRATVIAAKLE 994
LA LP + I +A ++ E
Sbjct: 787 LAGLPKTVIQQARLLLQHFE 806
>gi|375147658|ref|YP_005010099.1| DNA mismatch repair protein MutS [Niastella koreensis GR20-10]
gi|361061704|gb|AEW00696.1| DNA mismatch repair protein MutS [Niastella koreensis GR20-10]
Length = 873
Score = 275 bits (704), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 252/952 (26%), Positives = 445/952 (46%), Gaps = 158/952 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN---FMT--AS 144
TPL QQ +K +YPD +L+ VG + FGEDA +A++VLGI +N F + A
Sbjct: 9 TPLMQQHRAIKQRYPDAVLLFRVGDFYETFGEDAVVASQVLGITLTKRNNGAAFSSELAG 68
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG++V + Q E G RG++ L T
Sbjct: 69 FPHHALDTYLHKLVRAGYRVAICDQLEDPK------AAKGIVKRGVTELVTPG------- 115
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF-DVRLGVVAVEISTGDVVYGEFN 263
V + SN N + G F + + G+ ++ISTG+ E N
Sbjct: 116 VATNDKMLEHNSN----------------NFLAGIHFTEDQAGIAFLDISTGEFFVAEGN 159
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ + +L +L PAE++ + K +++ R + + +I G
Sbjct: 160 SEYI----DKLLQTLKPAEVIFQRSFQKHFKEVF--------GSRFYTYTMESWIFDGPY 207
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
A SL ++ +L + V E M++ +A A+ ++ +
Sbjct: 208 AN-ESLLKHFNTHSL-----KGFGVEE-----------MHLGIIAAGAVLHYLKDTEHPN 250
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH-IMNHTLTIYGSR 442
L+ I S + + + + T++ LE++ S G G LH ++++T++ G+R
Sbjct: 251 LQHI----TSIQRIDRDDYLWMDRFTIRNLELI---STGHGDGNNLHKVLDNTVSPMGAR 303
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LL+RW+ PL D N I+ RL+ V + + D +N
Sbjct: 304 LLKRWILLPLKDINRINERLELVEFFIKEV------------DLRNK------------- 338
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--HIDGEYREKVT 560
++ + + DI+R +++I + P E + + + + + ++++Q+ + D EY +++
Sbjct: 339 --LIQHIKQCGDIERLVSKIPLKKINPREVLHIARGLRHI-EEIKQICANADSEYLKRLA 395
Query: 561 S-----KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+ + + K +I + P + K + ++ A +L N I +NG+
Sbjct: 396 DSLNGCRYIEEKITKEII--DNPPVAVAKGGAIQPGIH---AGLDELRN--IATNGKEYL 448
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNS 675
V +K +S K + SL ++G N V G + KVP W + +
Sbjct: 449 VQLQQK--ESEKTGISSL------KIGFNN-----VFGYYLEVTNSHKSKVPTEWMRKQT 495
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY +PE+ +++ A E++ + ++ L E Y A Q LA LDC
Sbjct: 496 LANAERYITPELKEYEEKITGAEEKIMAIELDIYEKLLLELQDYIAPMQVNGNVLAILDC 555
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L A + + N+ +P HE + + RHPV++ L + ++ ND L +
Sbjct: 556 LLCFAHNALHFNYKKPEL---HEDGVLELKESRHPVIERNLPVGEPYISNDVLLEPASQQ 612
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
I+TGPNM GKS +RQ ALI +MA +GSFVPA++A + + D I+TR+GASD++ G S
Sbjct: 613 VIILTGPNMSGKSAILRQTALITLMAHMGSFVPATAARIPLTDKIFTRVGASDNLSGGES 672
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC-MVLFVT 912
TF+ E+NE + I+ N +++SL+++DE+GRGTST+DG++IA++ +YL + LF T
Sbjct: 673 TFMVEMNETASIINNISSRSLILLDEIGRGTSTYDGISIAWSIAEYLHQSPHAPKTLFAT 732
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ +++ K + +H++ + + + +L K+ PG S SFG V
Sbjct: 733 HYHELNELENKLP-RIKNFHIT-----------NKEVGNKIIFLRKLAPGGSTHSFGIHV 780
Query: 973 AQLAQLPPSCISRAT----VIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQE 1020
A++A +PP+ I RA V+ K E + ++ VQN KL DQ +E
Sbjct: 781 AKMAGMPPALIDRANEILKVLEKKHEDQPTANVQN---------KLQDQIKE 823
>gi|373123475|ref|ZP_09537321.1| DNA mismatch repair protein MutS [Erysipelotrichaceae bacterium
21_3]
gi|371660808|gb|EHO26052.1| DNA mismatch repair protein MutS [Erysipelotrichaceae bacterium
21_3]
Length = 843
Score = 275 bits (704), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 236/923 (25%), Positives = 408/923 (44%), Gaps = 143/923 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDH 138
T YTP+ + +ELK ++ D ++ +G + F EDA+ A+ L G A ++
Sbjct: 2 TKKATYTPMMKHYLELKEQHEDAIIFYRLGDFYEMFFEDAKTASSELDLVLTGRNAGVEE 61
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
IP +++RL+ G+KV +V+Q E A+ G R + + T T
Sbjct: 62 RVPMCGIPHHAAKGYIQRLIQKGYKVAIVEQLEDPALAK------GLVKRDVIKIVTPGT 115
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ D E + + + + FG L V+ E++TG++
Sbjct: 116 IM---------DEVSDEKTTVY--------IASLHDFQFG------LAVILCEMTTGELR 152
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ + ++ VLL + E+++ + K+ KM+
Sbjct: 153 AQLIDKHVM--AIQKVLLGNNVREIVIQEKFDKKIVKMI--------------------- 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
E M T+S + D + + +R + GI + D A + +
Sbjct: 190 ------------EEMQTITVSYHNDNAL----KEEYRHLLNGIED--DRVETAFGVLTNY 231
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L + + L A + + +T Q LE+ + + S TL ++ +
Sbjct: 232 LDETQKRNMAHLNAVEMVYENDF-LQMDFSTKQNLELTSSLRSNSRSQTLWSFLDKCRSS 290
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
GSRLL++W+ +PL D +I+ RLDAV + ++ + T + + +H
Sbjct: 291 MGSRLLKKWIEYPLVDTAMINRRLDAVEYLNDN---FITKDELREH-------------- 333
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
LG D++R R+ + +A P + + +++ + + + + H Y E
Sbjct: 334 ----------LGFVYDMERLSARVAYGSANPRDILRLIKTLEHTPQIFELFHDCSAYEE- 382
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
S R + A+I L D G + G E+ +
Sbjct: 383 -----FQSIDPCRELYDMIEGAIIDNPPLTLK-------DGG------VFVEGYNEELDQ 424
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA----NFKVPLNWAKVN 674
R+ ++ K + L N R++ G+++L+ + IE+ + K + +
Sbjct: 425 VREIGKNGKNWILELENKERERTGVKSLKIGYNRVFGYYIEVTKTNLDSIKDEFGYVRKQ 484
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ R+ + E+ D + A E + ++ L + Y + ALA +D
Sbjct: 485 TLTNAERFITQELKDKEDAIVHAQERSIRLEAELFNHLLNQIKVYLPKLHDLSHALATID 544
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREY 793
L+ALA +S + RP F H IH+ RHP+LD ++ +V ND + + +
Sbjct: 545 ALYALAEISSENGYTRPQF---HTGHSIHMKEARHPILDRMMKTTRYVSNDLEMGEDNDI 601
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS Y+RQ L+ IMAQ+G FVPA AE+ + D I+TR+GASD I G+S
Sbjct: 602 L-MITGPNMGGKSTYMRQTVLLVIMAQIGCFVPAKKAEMPIFDQIFTRIGASDDIMSGQS 660
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ L+N TA SL++ DE+GRGTST+DG+A+A A ++Y++ + K LF TH
Sbjct: 661 TFMVEMIEANNALQNATANSLILFDEIGRGTSTYDGMALAQAMIEYIMRNIKAKTLFSTH 720
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ ++ K G + HV + D VT+LY+V+ G ++ S+G VA
Sbjct: 721 YHELTEMAEKNAG-IRNVHVDV-----------HEEDDKVTFLYRVLDGKADKSYGINVA 768
Query: 974 QLAQLPPSCISRATVIAAKLEAE 996
+LA LP S + RA I LE +
Sbjct: 769 RLAHLPSSVLERAKQILDNLELQ 791
>gi|343084860|ref|YP_004774155.1| DNA mismatch repair protein mutS [Cyclobacterium marinum DSM 745]
gi|342353394|gb|AEL25924.1| DNA mismatch repair protein mutS [Cyclobacterium marinum DSM 745]
Length = 866
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 251/926 (27%), Positives = 421/926 (45%), Gaps = 144/926 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMT 142
K TPL +Q +K K+P +L+ VG + FGEDA A+K+L I N
Sbjct: 7 KETPLMKQYNAIKAKHPGAILLFRVGDFYETFGEDAVKASKILDIVLTKRANGSASHIEL 66
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
A P L+ ++ +L+ AG +V + Q E P + G RG++ L T
Sbjct: 67 AGFPHHSLDTYLPKLIRAGNRVAICDQLED-------PKEVKGIVKRGVTELVTPG---- 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGD---GFDVRLGVVAVEISTGDVV 258
+ +D + K RN G D RLG+ +++STG+ +
Sbjct: 116 --------------------LAYNDNVLDKRRNNFLASIQFGKD-RLGIAFLDLSTGEFM 154
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
E + ++ E +L S +P+E++ + A + ++ + + C
Sbjct: 155 CAEGHQSYI----EKLLQSFNPSEVIYSKA----------AKGAAGTLLKNDFHTFHC-- 198
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
+ + YE + +NN G+ NM +L + A + +
Sbjct: 199 -EDWVFQPAYTYEKLTNHFETNNLKGF--------------GVENM-ELGITAAGAILYY 242
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L++ +++ + S ++ + L T++ LE++ G L+ I++ T T
Sbjct: 243 LEETEHKQVKHI-VSISRIAEEKYVWLDKFTIRNLELVYPQQEGG--VPLIQILDRTQTP 299
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
GSR++++W+ PL ++ LI R +V+ Y SE
Sbjct: 300 MGSRMMKKWLVLPLKEKALIVERQKSVNFF------YENSE------------------- 334
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
+ + + L D++R I+++ P E + +A+ Y L I K
Sbjct: 335 --LREELFSHLKHVGDLERLISKVAVGRINPREMNHLKKALNYT------LPI------K 380
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM--IISNGQFSEV 616
KT + LK+L +S + LL ++KE + +L II NG S++
Sbjct: 381 ELLKTQQNGALKKLSDQLNS------CSYLLEKIDKELLEDAPMLTHQGGIIKNGVDSDL 434
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVN 674
RK S K+ L + ++ G+ +L+ F V G + KVP W +
Sbjct: 435 DEYRKLANSGKDYLVQIQQREVQRTGITSLKVAFNKVFGYYLEVSNTHKDKVPPEWIRKQ 494
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ +++ A E L + + + +++ G Y + Q + LA LD
Sbjct: 495 TLVNAERYITEELKEYEEKILHAEERLIALEQKYFQLLVQDAGDYVEQIQQNARVLATLD 554
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAERE 792
CL + A ++ + P D I I GRHPV++ L +++VPND L +
Sbjct: 555 CLLSFAEVASENKYCAPKIADSD---AIEIKDGRHPVIEKQLAIGEDYVPNDIYLDNSSQ 611
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS +RQ ALI +MAQ+GSFVPAS A + ++D ++TR+GASD++ +G
Sbjct: 612 QVIIITGPNMAGKSALLRQTALIVLMAQMGSFVPASFARVGIVDKVFTRVGASDNLSKGE 671
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVLF 910
STF+ E+ E + IL N + +SLV++DE+GRGTST+DG++IA++ ++YL H KC LF
Sbjct: 672 STFMVEMTETASILNNLSDRSLVLMDEIGRGTSTYDGISIAWSIVEYLHNHPKCKAKTLF 731
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ + F V ++V+ K +G V ++ K+ G SE SFG
Sbjct: 732 ATHYHELNQLANDFP-KVKNFNVAV----KELG-------NKVVFMRKLQKGGSEHSFGI 779
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAE 996
VAQ+A +P + RA I LE +
Sbjct: 780 HVAQMAGMPNPVVLRAAEIMKFLEKD 805
>gi|313900811|ref|ZP_07834301.1| DNA mismatch repair protein MutS [Clostridium sp. HGF2]
gi|312954231|gb|EFR35909.1| DNA mismatch repair protein MutS [Clostridium sp. HGF2]
Length = 843
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 236/923 (25%), Positives = 408/923 (44%), Gaps = 143/923 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDH 138
T YTP+ + +ELK ++ D ++ +G + F EDA+ A+ L G A ++
Sbjct: 2 TKKATYTPMMKHYLELKEQHEDAIIFYRLGDFYEMFFEDAKTASSELDLVLTGRNAGVEE 61
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
IP +++RL+ G+KV +V+Q E A+ G R + + T T
Sbjct: 62 RVPMCGIPHHAAKGYIQRLIQKGYKVAIVEQLEDPALAK------GLVKRDVIKIVTPGT 115
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ D E + + + + FG L V+ E++TG++
Sbjct: 116 IM---------DEVSDEKTTVY--------IASLHDFQFG------LAVILCEMTTGELR 152
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ + ++ VLL + E+++ + K+ KM+
Sbjct: 153 AQLIDKHVM--AIQKVLLGNNVREIVIQEKFDKKIVKMI--------------------- 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
E M T+S + D + + +R + GI + D A + +
Sbjct: 190 ------------EEMQTITVSFHNDNAL----KEEYRHLLNGIED--DRVETAFGVLTNY 231
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L + + L A + + +T Q LE+ + + S TL ++ +
Sbjct: 232 LDETQKRNMAHLNAVEMVYENDF-LQMDFSTKQNLELTSSLRSNSRSQTLWSFLDKCRSS 290
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
GSRLL++W+ +PL D +I+ RLDAV + ++ + T + + +H
Sbjct: 291 MGSRLLKKWIEYPLVDTAMINRRLDAVEYLNDN---FITKDELREH-------------- 333
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
LG D++R R+ + +A P + + +++ + + + + H Y E
Sbjct: 334 ----------LGFVYDMERLSARVAYGSANPRDILRLIKTLEHTPQIFELFHDCSAYEE- 382
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
S R + A+I L D G + G E+ +
Sbjct: 383 -----FQSIDPCRELYDMIEGAIIDNPPLTLK-------DGG------VFVEGYNEELDQ 424
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA----NFKVPLNWAKVN 674
R+ ++ K + L N R++ G+++L+ + IE+ + K + +
Sbjct: 425 VREIGKNGKNWILELENKERERTGVKSLKIGYNRVFGYYIEVTKTNLDSIKDEFGYVRKQ 484
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ R+ + E+ D + A E + ++ L + Y + ALA +D
Sbjct: 485 TLTNAERFITQELKDKEDAIVHAQERSIRLEAELFNHLLNQIKVYLPKLHDLSHALATID 544
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREY 793
L+ALA +S + RP F H IH+ RHP+LD ++ +V ND + + +
Sbjct: 545 ALYALAEISSENGYTRPQF---HTGHSIHMKEARHPILDRMMKTTRYVSNDLEMGEDNDI 601
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS Y+RQ L+ IMAQ+G FVPA AE+ + D I+TR+GASD I G+S
Sbjct: 602 L-MITGPNMGGKSTYMRQTVLLVIMAQIGCFVPAKKAEMPIFDQIFTRIGASDDIMSGQS 660
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ L+N TA SL++ DE+GRGTST+DG+A+A A ++Y++ + K LF TH
Sbjct: 661 TFMVEMIEANNALQNATANSLILFDEIGRGTSTYDGMALAQAMIEYIMRNIKAKTLFSTH 720
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ ++ K G + HV + D VT+LY+V+ G ++ S+G VA
Sbjct: 721 YHELTEMAEKNAG-IRNVHVDV-----------HEEDDKVTFLYRVLDGKADKSYGINVA 768
Query: 974 QLAQLPPSCISRATVIAAKLEAE 996
+LA LP S + RA I LE +
Sbjct: 769 RLAHLPSSVLERAKQILDNLELQ 791
>gi|333383386|ref|ZP_08475047.1| DNA mismatch repair protein mutS [Dysgonomonas gadei ATCC BAA-286]
gi|332827835|gb|EGK00570.1| DNA mismatch repair protein mutS [Dysgonomonas gadei ATCC BAA-286]
Length = 870
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 253/930 (27%), Positives = 428/930 (46%), Gaps = 156/930 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI----YAHLDHNFMT-AS 144
TPL +Q E+K+K+PD +L+ VG + F +DA AA++ GI A+ F+ A
Sbjct: 8 TPLMKQYFEIKSKHPDAILLFRVGDFYETFSQDAIDAAEITGITLTRRANGSAQFVELAG 67
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T
Sbjct: 68 FPHHALDTYLPKLVRAGKRVAICDQLEDPKLTK------TIVKRGITELVTPG------- 114
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
V ++ + N +C V F G+ ++ISTG+ + E
Sbjct: 115 VSINDNILNHKENNFLCAVH------------FAKS---SCGISLLDISTGEYLVAEGTK 159
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + +K+ Y G R D ++
Sbjct: 160 EYV----DKLLTNFSPKEVLV----ERSKKKLFEEYFG----TRFFIFELDDWV------ 201
Query: 325 EVMSLYENMGEDTLSNN-EDQNMD---VPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
E+ D L + E +N+ V N A I++ D+ I H+
Sbjct: 202 ----FTEDTARDRLLKHFETKNLKGFGVEHLTNGVIAAGTILHYLDVTQHT---QIGHI- 253
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
S + + L T++ LE++ + G + +LL I++ T + G
Sbjct: 254 -----------TSLSRIEEDKYVRLDKFTVRSLELISTMNEGGK--SLLDILDRTTSPMG 300
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+R+LRRW+ PL D I++RL V + + +
Sbjct: 301 ARMLRRWMVFPLKDAKPINSRLSVVEYFFKDL------------------------ELKG 336
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
+L L+ +G D++R I+++ TP E + + KV
Sbjct: 337 LLEEQLSLIG---DLERIISKVAVNRITPREVVQL----------------------KVA 371
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKL------LSTVNKEA-ADQGDLLNL-MIISNGQ 612
K + ++ L +S P++ KL + KE D +LN +I+ G
Sbjct: 372 LKAIEP--IREAFLASSEPSLREIGEKLNPCPIIRERIEKEIHPDPPTMLNRGNVINKGV 429
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNW 670
+E+ R S K+ L + + G+ +L+ F SV G + KVP W
Sbjct: 430 NAELDELRDISYSGKDYLLKIQQRETEATGISSLKISFNSVFGYYIEVRNAHKDKVPAEW 489
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + RY + E+ +++ A E++ + A ++ + Y Q +
Sbjct: 490 IRKQTLVNAERYITQELKDYEEKILGAEEKILSLETALFNDLVLSLVEYIPTIQVNANLI 549
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLH 788
A DCL + A +++ ++RP ++D + ++I +GRHPV++ L ++++ ND L
Sbjct: 550 AQTDCLLSFAKVAKENKYIRPE-INDTDALKIK--NGRHPVIEKQLPLGESYITNDVFLD 606
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ + IITGPNM GKS +RQ ALI +MAQ GSFVPA SA++ ++D I+TR+GASD+I
Sbjct: 607 SNSQQIIIITGPNMAGKSALLRQTALITLMAQAGSFVPAESAQIGLVDKIFTRVGASDNI 666
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKC 906
G STF+ E+NEA+ IL N + +SLV+ DELGRGTST+DG++IA+A ++Y+ EH K
Sbjct: 667 SLGESTFMVEMNEAADILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKA 726
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ +++ F + ++VS + MD++ + +L K+VPG SE
Sbjct: 727 KTLFATHYHELNEMEKSFK-RIKNFNVS-------VKEMDNR----IIFLRKLVPGGSEH 774
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
SFG VA++A +P S + RA I +LE +
Sbjct: 775 SFGIHVAKMAGMPQSIVKRANNILKQLETD 804
>gi|344229566|gb|EGV61451.1| DNA mismatch repair protein Msh6 [Candida tenuis ATCC 10573]
Length = 1167
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 249/928 (26%), Positives = 407/928 (43%), Gaps = 111/928 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV--LGIYAHLDHNFMTASI 145
K+TP E+Q E+K+K D ++ + G + + DA +A L + N A I
Sbjct: 276 KFTPFEKQYWEIKSKMWDTVVFFKKGKFYELYENDAVIANSKFDLKLAGGGRANMKLAGI 335
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTET---AAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
P + + ++ G+KV V Q E+ ++ G + R L+A+ T TL
Sbjct: 336 PEMSFDYWAKEFISNGYKVARVDQKESLLAKEMRGGGSKEEKVIKRELTAVLTGGTLT-- 393
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
D+ D + Y + + ++ N D + GVV V+ +T ++ + E
Sbjct: 394 -DLNMITDDM---ATYCLSIKEEKVNDN-----------DYKFGVVFVDTATSELNFIEI 438
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
D + LE ++ + P E++ EK L+ AS V S + +
Sbjct: 439 EDDKYCNKLETLITQVRPKEVI--------CEKHNLS--SLASKVLKYNNSNQIWNALDS 488
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
L E Y+ E + + D+ + N + + LA A + +LK
Sbjct: 489 LTEFWD-YDLTLEKLVKSQYYPGEDLDDFSNFPELLVEFKDNHQLAFNAFGGLLFYLKTL 547
Query: 383 GL-ERIMCLGASFRSL----SGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
L E IM L +F+ S S + L TL LE+L N+ +GS+ GTL ++N +T
Sbjct: 548 KLDESIMTL-KNFKKYDINKSSSSHLILDGITLNNLEILNNSHDGSDKGTLFKMINKAIT 606
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
+G R+L+ WV +PL + I+ R ++ + +R +
Sbjct: 607 PFGKRMLKTWVLNPLLNAEDINERFKSIEFLMGDGADFRQT------------------- 647
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
L S LT L PD++R + RI + +F+ V++ K + L
Sbjct: 648 ----LESGLTGL---PDLERLLARIHGGSLRFKDFLKVIEGFERISKLVDNLR------- 693
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LLNLMIISNGQF 613
+ TS+ + S +G+ L + E D D L +++ + G
Sbjct: 694 EFTSREM-----------GSLHKFVGEFPSDLHELIAEWEDSFDRIQALSDVISPTKGID 742
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK-VPLNWAK 672
E + + + + +L++ + ++Q + + F LIELP K +P +W
Sbjct: 743 EEFDDSMDKINNLESQLNTYLQQYKRQYKSQEICFRDSGKEIFLIELPNKIKNIPKDWQT 802
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ ST K RY SPEV + +L E +VC + K+F +Y + A+ +L+
Sbjct: 803 MGSTSKVKRYWSPEVKLLVRELLEQKELHKMVCDNLKSNMFKKFDTHYNTWCKAIGSLSK 862
Query: 733 LDCLHALATLSRNKNF--VRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAE 790
LDCL +L S + +P FV+ I R+PV F+PND L E
Sbjct: 863 LDCLISLTRASELIGYPSCKPNFVNSSNGF-IDFKELRNPVYQGT--KEFIPNDVRLGGE 919
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
++TG N GKS +R AL I++Q+G F+PA A L +D I TR+GA+D+I Q
Sbjct: 920 EPKFCLLTGANAAGKSTIMRTTALAVILSQIGCFLPALEATLTPVDKIMTRLGANDNILQ 979
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF EL+E IL N T +SLVI+DELGRG S+ DG AIA A L L H + F
Sbjct: 980 GKSTFFVELSETKKILNNATPKSLVILDELGRGGSSADGYAIAEAVLYQLCTHINTLGFF 1039
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKV----MGPMDSKSDQDVTYLYKVVPGVSES 966
TH+ GS+G +S+ ++ MG + + +++T+LYK+ G +
Sbjct: 1040 ATHF-----------GSLG---LSFENHPQIKPMRMGIIAEQDSRNITFLYKLEHGAASG 1085
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLE 994
SFG VA + + + A + A E
Sbjct: 1086 SFGMNVASMCGIANEIVENAEMAAKNYE 1113
>gi|387791391|ref|YP_006256456.1| DNA mismatch repair protein MutS [Solitalea canadensis DSM 3403]
gi|379654224|gb|AFD07280.1| DNA mismatch repair protein MutS [Solitalea canadensis DSM 3403]
Length = 874
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 263/956 (27%), Positives = 437/956 (45%), Gaps = 156/956 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMT 142
K TPL Q ++KTKYP +L+ VG + FG+DA +A +LGI N
Sbjct: 8 KETPLMAQYNQIKTKYPGAILLFRVGDFYETFGDDAVKSANILGITLTKRANGSASHIEL 67
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEA 201
A P L+ ++ +LV AG +V + Q E P RG++ L +
Sbjct: 68 AGFPHHSLDTYLPKLVRAGQRVAICDQLED-------PKTVKTIVKRGVTELVSPG---- 116
Query: 202 AEDVGGGEDGCGGESN-YLVCV-VDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
V E+ ++N YL V D D LG+ ++ISTG+ +
Sbjct: 117 ---VAYNENILNNKANNYLAAVYFDKDA-----------------LGIALLDISTGEFLT 156
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
+ ++ + +L S P E++ + S+ + + A D G
Sbjct: 157 AQGEADYI----DKLLQSFRPTEVIFSKSKSRD-------FVSQFGDKFYTYAVDDWVFG 205
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
E +L ++ G +L +N+ GI+ A A I
Sbjct: 206 YDYANE--TLLKHFGTVSLKGFGIENLH-----------HGIV-----AAGACLHYIFEA 247
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ ++ I A + + L T++ LE++ + + G+ L+ I++ T T
Sbjct: 248 EHRNVQHI----AQISRIEEDRYVWLDRFTIRNLELIFSPNEGAT--PLISILDQTATPM 301
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G+RLLR+W+ PL ++ LI RL V E E SD+
Sbjct: 302 GARLLRKWMVMPLKEKVLIVERLSVVQHFFE-------------QQELASDI-------- 340
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--HIDGEYRE 557
+ L +G D++R I+++ + A P E + + +A L A +++ + + E +
Sbjct: 341 ---QAKLKPIG---DLERLISKVALQKANPRELVQLGRA-LAAIAEIKSVTENTKQESLQ 393
Query: 558 KVTSKTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
K+ + L++ I L P ++ K +I++G
Sbjct: 394 KIADQLNPCKLIREKIENQLNPEPPVLVQKGG--------------------VIADGICE 433
Query: 615 EVARARKAVQSAKEELDSLINMCRKQ---LGMRNLE--FMSVSGITHLIELPANFKVPLN 669
E+ + RK S K D L++M R++ G+ +L+ F +V G + KVP
Sbjct: 434 ELDQLRKIAFSGK---DYLLDMQRRESDATGIPSLKIAFNNVFGYYLEVTNAHKDKVPEE 490
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W + + RY +PE+ +++ A E++ + ++ L Y Q
Sbjct: 491 WIRKQTLVNAERYITPELKEYEEKILGAEEKIFALENKLYNDLLMGMLEYIRPIQLNALL 550
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNL 787
+A LD + A ++ ++ +P VDD+ I I +GRHPV++ L + ++PND L
Sbjct: 551 VAQLDVQLSFAQVAVKNHYSKPEIVDDN---VIDIKAGRHPVIEKSLPLGEEYIPNDVFL 607
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
E + +ITGPNM GKS +RQ ALI +MAQVGSFVPA +A L + D I+TR+GASD+
Sbjct: 608 DDETQQIIMITGPNMAGKSALLRQTALIVLMAQVGSFVPAKAARLGITDKIFTRVGASDN 667
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE--HKK 905
+ G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA++ +Y+ K
Sbjct: 668 LSSGESTFMVEMNETASILNNLSNRSLVLLDEIGRGTSTYDGISIAWSIAEYIHNDPKSK 727
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ +++ +F + ++VS + D V +L K+V G SE
Sbjct: 728 AKTLFATHYHELNEMENEFE-RIKNFNVSI-----------KEVDNKVIFLRKLVAGGSE 775
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKL--SDQEQ 1019
SFG VA++A +PP + +A + KLE E SS +A ++ + KL SDQ Q
Sbjct: 776 HSFGIHVARMAGMPPKVVKKAEEVLRKLEEERSSESGTGAAIKNGVKKLKKSDQMQ 831
>gi|442743203|ref|YP_007374507.1| putative DNA mismatch repair protein MutS [Candidatus Uzinura
diaspidicola str. ASNER]
gi|442739271|gb|AGC66967.1| putative DNA mismatch repair protein MutS [Candidatus Uzinura
diaspidicola str. ASNER]
Length = 785
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 247/913 (27%), Positives = 420/913 (46%), Gaps = 154/913 (16%)
Query: 95 QVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHV 154
Q ++K++YP+ LL+ VG + F +DA ++ L I + A P LN +
Sbjct: 3 QYHQIKSRYPEALLLFRVGDFYETFEDDAIKCSESLNIVLTNRSDIKLAGFPHHALNNFL 62
Query: 155 RRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDVGGGEDGCG 213
+LV AG++V + Q E P K G RG++ L T
Sbjct: 63 PKLVQAGYRVAICDQLE-------DPKKTKGIVKRGITHLVTPG---------------- 99
Query: 214 GESNYLVCVVDDDGNVGKIRNGVFGDGFDV-RLGVVAVEISTGDVVYGEFNDGFLRSGLE 272
+DD K N + F+ + GV ++ISTG+ + E + +++ ++
Sbjct: 100 -------LTLDDQILQAKSNNFLAALHFEKEKSGVAFLDISTGEFLVAEEKNSYVKQLIK 152
Query: 273 AVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYEN 332
+ SP+E++ + + E++L + F A+ + + YE+
Sbjct: 153 KI----SPSEIIYQKKKKDKFEELL---------------ENNFF--SFAMDDWVFQYES 191
Query: 333 MGEDTLSNNEDQNMDVPEQGNHRSAI---EGIMNMPDLAVQALALTIRHLKQFGLERIMC 389
E + + ++ N + AI I N D + IRH+
Sbjct: 192 AYEKLTRHFQTSSLKGFGVENLKYAIIAAGAIFNYLDHTHNS---KIRHI---------- 238
Query: 390 LGASFRSLSGSMEMTLSANTLQQLEVLRNNS-NGSEYGTLLHIMNHTLTIYGSRLLRRWV 448
+S R + + + T++ LE+L +N NG +LL I++ TLT GSRLL+RW+
Sbjct: 239 --SSLRRIDPDKYVWMDDFTIKSLEILESNHLNGR---SLLEILDSTLTFMGSRLLKRWI 293
Query: 449 THPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTS 508
P+ + + I AR + V + S N D+ L+ S
Sbjct: 294 IMPIKNLSTIYARYNLVEALLRS----------------NIDMK---------LTKFFKS 328
Query: 509 LGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT----- 563
LG DI+R +++ + TP E + + +++ + L E + + S
Sbjct: 329 LG---DIERLTSKVIIESITPRELMNLSHSLVVMENIKKLLSSSNEDKLNLYSNKFPYLN 385
Query: 564 -LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKA 622
L+ + R IL + +GK +I++G E+ R
Sbjct: 386 PLYDTI--RRILHSDPAHQLGKGN--------------------VIASGVSKELDELRAL 423
Query: 623 VQSAKEELDSLINMCRKQLGM-RNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKT 679
V S K++L+ + RK G+ + F +V G + IE+ + KVP NW + + +
Sbjct: 424 VSSLKKDLERICLHERKSTGIPLKISFNNVFG--YYIEIRNIYKNKVPENWMRKQTLVNS 481
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY + E+ + ++ A E++ + + + + + G Y+ + Q + +A LD L A
Sbjct: 482 ERYITEELKSLEIKILGAEEKILSLEKDLFKNLVFSVGKYFIDLQKVSKLIAHLDVLFAF 541
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQII 797
A ++N +VRP+ + + ++I GRHPV++ L N+V ND + II
Sbjct: 542 ANNAKNNEYVRPII---NNSMNLYIKKGRHPVIEKSLPFGTNYVANDLFIDNVESQILII 598
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS +RQ ALI +MA GS+VPA + +D I++R+GASD+I G STF+
Sbjct: 599 TGPNMAGKSAVLRQTALIVLMAHFGSYVPAQYVYIGYIDKIFSRVGASDNISLGESTFMV 658
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLFVTHYPK 916
E+NE + IL N + +SL+I+DE+GRGTST+DG +IA+A ++YL EH K+ LF THY +
Sbjct: 659 EMNETASILNNMSKRSLIILDEIGRGTSTYDGASIAWAVVEYLHEHPKRPKTLFATHYHE 718
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ + F + ++VS + D +V +L K++PG S+ S G VA++A
Sbjct: 719 LHKMSNIFK-RIKNFNVSV-----------REIDGNVIFLRKLIPGESKHSLGLHVAKIA 766
Query: 977 QLPPSCISRATVI 989
+PPS + A I
Sbjct: 767 NMPPSVLKIAKEI 779
>gi|44888185|sp|Q7W880.2|MUTS_BORPA RecName: Full=DNA mismatch repair protein MutS
Length = 883
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 273/939 (29%), Positives = 423/939 (45%), Gaps = 144/939 (15%)
Query: 78 TPSSQTTHNK--KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH 135
TP QTT + +TP+ QQ + LK + +LL +G + F EDAE AA++L +
Sbjct: 4 TPK-QTTGDALAGHTPMMQQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERAARLLNLTLT 62
Query: 136 LDHN-----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRG 189
N A IP + ++ RLV G V + +Q + AA K GP R
Sbjct: 63 KRGNSNGTPIPMAGIPVHAMEQYLARLVALGESVAICEQIGDPAAAK-------GPVERR 115
Query: 190 LSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
+ + T TL + D + VCV GK + R G+
Sbjct: 116 IVRIVTPGTLTDEALLPAKAD----RALAAVCVT------GK---------REPRAGLAW 156
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRV 309
+ +++G E G LE+ L ++PAEL+ Q E L A + RV
Sbjct: 157 LNLASGAFHVTECAPG----QLESELHRIAPAELI-------QAESAELHMAFEGARTRV 205
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
F GA A++++ ++ D+L + ++M +A+ + A
Sbjct: 206 PDWH---FEADGARAQLLAHFKT---DSLGGFDVEDMP--------AAVCAAGALLRYAA 251
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
+ + + H++ ER + L T + LE L +G E TL
Sbjct: 252 RTQSQALAHVQTIAAER------------PGQYVLLDPVTRRNLE-LTQTLSGEESPTLF 298
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ T GSRLLRRW+ HPL + + AR A++ T +V Q E+
Sbjct: 299 SLLDGCRTPMGSRLLRRWLHHPLRENEPVLARQHAIA----------TMLTVRQEGEQAF 348
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
+L ++ +L PDI+R R+ R+ P E ++ A++ L L
Sbjct: 349 AAA-------GLLETLRDALNAFPDIERIAARVALRSVRPRELASLRDALV----ALPAL 397
Query: 550 H-----IDGEYREKVTSKTLH-----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
H + G R + + L LL R + AS PAV + D
Sbjct: 398 HASLAPLSGSPRARELAAQLAMPPDIGELLARAV--ASEPAVAIR-------------DG 442
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHL 657
G +I+ G SE+ R + L L R++ G+ NL EF V G
Sbjct: 443 G------VIAAGFDSELDELRALATDGGDFLVQLEARERERTGIGNLRVEFNRVHGFYIE 496
Query: 658 IELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+ KVP ++ + + K RY +PE+ T D++ A + + ++ L
Sbjct: 497 VSKGQTDKVPEDYRRRQTLKNAERYITPELKTWEDRVLSAQDRSLAREKWLYEQLLDALA 556
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y ALA LD L ALA +R ++V P +D E I I +GRHPV++ +
Sbjct: 557 QYVRPLSQCASALAELDTLAALAEHARRHDWVAPELIDGAE---IDIEAGRHPVVERAI- 612
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
+ F PN L R +ITGPNMGGKS Y+RQVALI ++A+ GSFVPA+ A + LD
Sbjct: 613 ERFTPNGCRLDQTRRML-LITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDR 671
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GA+D + GRSTF+ E+ EA+ IL T SLV++DE+GRGTST+DG+A+A+A
Sbjct: 672 IFTRIGAADDLAGGRSTFMMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIA 731
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLY 957
LL H + + LF THY ++ T+ T +L + + G + +L+
Sbjct: 732 YRLLTHNRALTLFATHYFEL----TRLPAEQPTAANVHLAAAESAG--------GIVFLH 779
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+V G + S+G +VAQ A +P + I +A+ +LEA+
Sbjct: 780 EVREGPASRSYGIQVAQRAGVPAAVIRQASRELERLEAQ 818
>gi|423342468|ref|ZP_17320182.1| DNA mismatch repair protein mutS [Parabacteroides johnsonii
CL02T12C29]
gi|409217385|gb|EKN10361.1| DNA mismatch repair protein mutS [Parabacteroides johnsonii
CL02T12C29]
Length = 879
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 261/932 (28%), Positives = 442/932 (47%), Gaps = 160/932 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA A++LGI N A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVTGAEILGIVQTKKANGPGQTVEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + + GK DV G+ ++ISTG+ + E +
Sbjct: 120 ILNHK-----ENNFLAAI-----HFGK----------DV-CGIAFLDISTGEFLTAEGSI 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP FI L
Sbjct: 159 DYV----DKLLNNFSPKEVLVERGSRKRFEEAF----GPR-----------FFIF--ELD 197
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ + E + L + E +N+ +G G+ ++ L + A + +L Q
Sbjct: 198 DWVFTLEAANDRLLKHFETKNL----KGF------GVQHLK-LGIVASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT-LLHIMNHTLTIYGSRL 443
I + S + + L T++ LE++ S +E GT LL +++ T++ GSR+
Sbjct: 247 THISHI-TSLSRIEEDRYVRLDKFTVRSLELV---STMNEEGTSLLDVLDKTVSPMGSRM 302
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LRRW+ PL D I R D V E +H P+ +L
Sbjct: 303 LRRWILFPLKDVKPIHERQDVV-------------EYFFRH-----------PEVKELLE 338
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
L +G D++R I+++ +P E + + KV +
Sbjct: 339 EKLEQIG---DLERIISKVAVGRVSPREVVQL----------------------KVALRA 373
Query: 564 LHSALLKRLILTASSPAV--IGK----AAKLLSTVNKEA-ADQGDLLNL-MIISNGQFSE 615
+ +K + + + P++ IG+ A + + KE D LLN +I+ G +E
Sbjct: 374 IEP--IKEVCMASDEPSLCRIGEQLNACALIRDRIEKEINNDPPSLLNRGGVIATGVNAE 431
Query: 616 VARARKAVQSAKEELDSLINMCRKQL---GMRNLE--FMSVSGITHLIELPANF--KVPL 668
+ R S K D L+ + +++ G+ +L+ F +V G + IE+ + KVP
Sbjct: 432 LDELRAIAYSGK---DYLLKVQAREIELTGISSLKIGFNNVFG--YYIEVRNAYKDKVPA 486
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
W + + RY + E+ +++ A E++ + ++ + Y Q
Sbjct: 487 EWIRKQTLVNAERYITEELKEYEEKILGAEEKILSLEARLFNELVLCLSEYIPPIQMNAN 546
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTN 786
+ LDCL + A ++ ++RP D ++ I I +GRHPV++ L + ++ ND
Sbjct: 547 LIGRLDCLLSFAKVAEINRYIRP---DVNDSQVIDIKAGRHPVIEKQLPIGEPYIANDVY 603
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L E++ IITGPNM GKS +RQ ALI +M+Q+G FVPA A + ++D I+TR+GASD
Sbjct: 604 LDDEKQQIIIITGPNMAGKSALLRQTALITLMSQIGCFVPAECAHIGIVDKIFTRVGASD 663
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--K 904
+I G STF+ E+NEAS IL N +++SLV+ DELGRGTST+DG++IA+A ++Y+ EH
Sbjct: 664 NISVGESTFMVEMNEASDILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPSA 723
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
+ LF THY ++ +++T F + Y+VS + + V +L K+VPG S
Sbjct: 724 RAKTLFATHYHELNEMETSFK-RIKNYNVSV-----------KEVNNKVIFLRKLVPGGS 771
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
E SFG VA++A +P S + R+ I +LE E
Sbjct: 772 EHSFGIHVAKMAGMPKSIVKRSNEILKQLETE 803
>gi|409098138|ref|ZP_11218162.1| DNA mismatch repair protein MutS [Pedobacter agri PB92]
Length = 859
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 257/945 (27%), Positives = 432/945 (45%), Gaps = 145/945 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------FMTASIPT 147
QQ +K KYP LL+ VG + FGEDA A++LGI A P
Sbjct: 2 QQYNAIKAKYPGALLLFRVGDFYETFGEDAIKTAQILGIVLTRRGTGPNGGALELAGFPH 61
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
L+ ++ +LV AG +V + Q E RG++ L T V
Sbjct: 62 HSLDNYLSKLVRAGQRVAICDQLEDPK------ATKTIVKRGVTELVTPG-------VAY 108
Query: 208 GEDGCGGESN-YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGF 266
G++ +SN YL V D ++G+ ++ISTG+ + + N +
Sbjct: 109 GDNIVNQKSNNYLASVFFDK----------------TQIGISFLDISTGEFLIAQGNGDY 152
Query: 267 LRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEV 326
+ + +L P E++ K + L G D F G +
Sbjct: 153 I----DKLLQGFKPTEVIF----QKSKRQNFLEQFG------------DRFYTFGL--DE 190
Query: 327 MSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHLKQFGLE 385
+ E+TL+ ++ DV ++++G + + A + + +L +
Sbjct: 191 WPYTSDYAEETLT----KHFDV-------ASLKGFGIERLQSGIVAAGVVLHYLGETEHR 239
Query: 386 RIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLR 445
+ + S + M L T++ LE++ NS TL I++HT T G+RLL+
Sbjct: 240 NLQHI-TSISRIEEDRYMWLDRFTIRNLELV--NSANDNAVTLFDILDHTSTPMGARLLQ 296
Query: 446 RWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSV 505
+W+ PL + I RL V KN ++
Sbjct: 297 KWIIMPLKELKPIEERLGMVDFFV-----------------KNEEIQ----------QEF 329
Query: 506 LTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH 565
LT + + DI+R I+++ + P E +A+ +A++ HI E + + + + +
Sbjct: 330 LTHIKQIGDIERLISKVGLQRVGPRELVALKRALI---------HI--EAVKNLAANSKN 378
Query: 566 SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIISNGQFSEVARARKAV 623
+ L+K I +P + + + +E + L+ +IS+G ++ R RK
Sbjct: 379 TFLIK--IADQLNPCL-----AIRERIERELQPEPPALLVKGNVISDGVDEDLDRLRKIA 431
Query: 624 QSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIR 681
K+ L + + G+ +L+ F +V G + KVP W + + R
Sbjct: 432 FGGKDYLVQIQKREAEATGIPSLKISFNNVFGYYLEVTHTHKDKVPEGWIRKQTLVNAER 491
Query: 682 YHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALAT 741
Y +PE+ +Q+ A E++ + ++ + E GY Q +A LDCL A
Sbjct: 492 YITPELKEYEEQILGAEEKIQAIEIRLYNELMYETAGYIKPIQLNAFLIAQLDCLLCFAQ 551
Query: 742 LSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQIITG 799
L+ ++V+P D + I GRHPV++ L ++ ND L ++ + +ITG
Sbjct: 552 LAEKNHYVKPTVNKDK---VLDIKGGRHPVIEKQLPVGQEYITNDVYLDSDSQQIIMITG 608
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS +RQ ALI +MAQ+GSFVPA +A++ ++D I+TR+GASD+I G STF+ E+
Sbjct: 609 PNMAGKSAILRQTALIVLMAQMGSFVPAKAADVGLVDKIFTRVGASDNISSGESTFMVEM 668
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFVTHYPKI 917
NE + IL N + SL+++DE+GRGTST+DG++IA+A ++L +H + LF THY ++
Sbjct: 669 NETASILNNISDNSLILLDEIGRGTSTYDGISIAWAIAEFLHQHPTSRPKTLFATHYHEL 728
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
++ + ++VS + M +K V +L K+VPG SE SFG VA++A
Sbjct: 729 NELANTMP-RIKNFNVS-------VKEMTNK----VIFLRKLVPGGSEHSFGIHVAKMAG 776
Query: 978 LPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQ 1022
+PP I RA I KLE + R + +S K D + K+ +Q + Q
Sbjct: 777 MPPKLIGRANEILKKLEID---RTEGQSIK-DSIKKVQNQAYQLQ 817
>gi|401679865|ref|ZP_10811789.1| DNA mismatch repair protein MutS [Veillonella sp. ACP1]
gi|400218992|gb|EJO49863.1| DNA mismatch repair protein MutS [Veillonella sp. ACP1]
Length = 873
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 259/946 (27%), Positives = 436/946 (46%), Gaps = 147/946 (15%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
KK TP+ +Q +++K+++ D LL +G + F EDA +A++ L I +
Sbjct: 3 KKVTPMMEQYLDIKSRHSDELLFFRLGDFYELFNEDALIASRELNITLTGRPTGNEERTP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGPFGRGLSALYTKATLE 200
+P ++ LV G+KV + +Q E A+K G R + + T T+
Sbjct: 63 MCGVPFHAAESYIETLVKKGYKVAICEQLEDPKAVK-------GIVKRDVIQVITPGTVM 115
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E+G SN + + V + VF D ISTG+V++
Sbjct: 116 T-------ENGNDARSNNFLALF---YLVKEAWILVFSD------------ISTGEVIW- 152
Query: 261 EFNDGFLRSGLEAVLLSLS---PAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
D ++ + + SLS PAE+++ P + ++ + N V
Sbjct: 153 ---DRVPQNNISQIYDSLSMYRPAEIIV--PEGTILPQAIVDFIHNQFNNVV-------- 199
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
L+ S L+NN Q+M G+M LA AL +
Sbjct: 200 -----LSPFTSFESVDSACKLANNHFQDM-------------GLMEEDVLA--ALGFMLL 239
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+L+ I + + G+ + L ++L+ LE+ N +G GTLL +++ TLT
Sbjct: 240 YLQDVIKTEISHINYVHQMDVGN-RLILDTSSLRHLEITHNLRDGGVKGTLLDVLDRTLT 298
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G+RLL++W+ PL D I R AV+E+ + ++ E+ E Q
Sbjct: 299 PMGARLLKQWLESPLTDIPTIQRRQAAVAEL------------ISRNAER------CEIQ 340
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA--ILYAGKQLQQLHIDGEY 555
Y L D +R + RI + +P +F ++ ++ +L K L + G
Sbjct: 341 SY---------LDCIYDFERIVGRIETGSVSPRDFTSLRESLQVLPNIKTLLK-EFSGLS 390
Query: 556 REKVTSKTLHSA----LLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
+ S+ A LL R I A PA+ K + +I +G
Sbjct: 391 LTSINSRIDDHADIYDLLSRAI--AEQPALTLKDGR-------------------VIRDG 429
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPANFKVPLNW 670
E+ R +++ L L + R++ G++ ++ V G + KVP +
Sbjct: 430 YNEELDELRSLATNSEVWLQKLEDKAREETGLKLKTKYNKVFGYFFEVSKAQVDKVPAYF 489
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ +T RY +P++ ++ A E++ + + + + G + Q +AL
Sbjct: 490 IRKQTTVNAERYITPDLKEFEIKILSAKEKIVSLEQQLYQDLRNQIKGVIKKVQETARAL 549
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHA 789
A LD L +LAT++ N++ P V + QI+I GRHPV++ L + FVPND L+
Sbjct: 550 AELDVLASLATVAYESNYICPNIVMNG---QINIRDGRHPVIEKFLKREVFVPNDVVLNH 606
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E +ITGPNM GKS Y+RQVA++ IMAQ+GSF+PA A + +D ++TR+GASD I
Sbjct: 607 DDEEFMLITGPNMAGKSTYMRQVAILMIMAQIGSFIPAREATISPVDRVFTRVGASDDIS 666
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
G+STF+ E+ E +YIL N T++SL+I+DE+GRGTST DG++IA A ++++ +H L
Sbjct: 667 TGQSTFMVEMKEVAYILENATSKSLIILDEIGRGTSTFDGLSIAQAVVEHICKHIHAKTL 726
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ ++ + + Y V+ K D+ +L +++ G ++ S+G
Sbjct: 727 FATHYHELIPLEEVYP-RLKNYTVAVKEKRK-----------DIAFLRRIIRGGADRSYG 774
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEV--SSRVQNRSAKRDLLVK 1013
VA+LA LP + RA VI LE + S + NR + ++K
Sbjct: 775 IHVAKLAGLPAQVLKRAEVILESLEEQNTDSDDLNNRVITSEAVIK 820
>gi|304440469|ref|ZP_07400358.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371221|gb|EFM24838.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 864
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 235/940 (25%), Positives = 442/940 (47%), Gaps = 135/940 (14%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFM 141
+K TP+ +Q +E K Y D +L +G + F +DA A+K L G LD
Sbjct: 7 EKVTPMMRQYLETKKNYEDAILFYRLGDFYEMFFDDAITASKELDLALTGRGGGLDDKIP 66
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
IP ++ +L++ G+KV + Q E + G R ++ + T T
Sbjct: 67 MCGIPHHVFKNYLSKLIDKGYKVAICDQVEDPKLAK------GIVKREVTKVVTPGTFTD 120
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ + G +N++ + D +V + V+ STG ++
Sbjct: 121 TDYIEAGS------NNFMTSLYVRDNSVS----------------ITYVDYSTGMLLSTS 158
Query: 262 ---FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
N+G ++ ++ +SP E+++ + +K +L N+ E +++
Sbjct: 159 KVFLNEGSRDEYIDLIVSKISPKEVVINSDAERYFDKSVLKNYINEKNIE-EIKNKEY-- 215
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
+ L + ++ L++ +N+ ++E ++N + +
Sbjct: 216 -------LKHLSSELKDELLNSKYRENI----------SLEILLNY-----------LSN 247
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
+ + L I+ + ++ +M L N+++ LE+L+ ++ + G+LL ++++T T
Sbjct: 248 VSKTKLNHIVKIA----DINLEQKMILDENSMRNLEILKGLNSNRKSGSLLEVLDYTKTS 303
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLLRRW+ PL + + I R D V E SD +++
Sbjct: 304 MGQRLLRRWIEEPLLNVDEIKKRQDYVEEFK-------------------SDFILLD-DV 343
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
ILSS++ D++R + +I P+EF A ++ L + +L+ +++G +
Sbjct: 344 RSILSSII-------DMERQMVKISDNEINPNEFNA-LKGSLASVMELKS-YLEGSNFKN 394
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
+ + L +I S V K + ++ I +G E+
Sbjct: 395 LNEISYELKPLYNIIEEIDSMIVEDAPVKTV--------------DVKFIKDGYNEELDE 440
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL--PANFKVPLNWAKVNST 676
+ + K+ L L +++ G++NL+ + + IE+ A VP + + +
Sbjct: 441 LFRLSKDGKKFLIDLEAKEKEETGIKNLKIKYNKILGYFIEVTKSALDMVPERYIRKQTL 500
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
+ R+ + E+ ++ A++E + +D+ ++ F Y + + ++ +D L
Sbjct: 501 VGSERFFTIELKEMESKILNAHDEANSLQLKLYDNLIENFKKYTSLLLEVSEIVSRIDVL 560
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYCQ 795
LA + F+RP +D+ I I GRHP+++ D+ F+PNDT L ++
Sbjct: 561 QGLAKSAIENRFIRPELNEDN---TIIIKDGRHPIVEFKNRDDSFIPNDTILDMDKNLIH 617
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
IITGPNM GKS Y+RQ+ALI IMAQ+GSFVPA S + ++D I+TR+GASD++ +G STF
Sbjct: 618 IITGPNMAGKSTYMRQIALIVIMAQIGSFVPAKSCNIGIVDRIFTRIGASDNLSKGESTF 677
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
+ E+ E + IL+N T +SL+I+DE+GRGTST DG++IA++ ++Y+ E+ +F THY
Sbjct: 678 MVEMKEVANILKNATDKSLIILDEVGRGTSTFDGMSIAWSIVEYISENIGAKTVFATHYH 737
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
+++ I+ + +VS L + KV K +++ +L K+V G +++S+G VA+L
Sbjct: 738 ELSKIEETYK------NVSNL-NIKV-----KKDGEEIIFLRKIVEGWTDNSYGIDVAKL 785
Query: 976 AQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLS 1015
A + RA I LE ++ N K+D++ + S
Sbjct: 786 AGIDEKVTKRAEEILKSLE---KTKDLNVKVKKDVVFEKS 822
>gi|387880492|ref|YP_006310795.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
gi|386793940|gb|AFJ26975.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
Length = 849
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 259/963 (26%), Positives = 443/963 (46%), Gaps = 175/963 (18%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K +P QQ +++K YPD L+ +G + F EDA AA++L I + ++
Sbjct: 4 EKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVTAAQILEISLTSRNKNAENPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ L+ G+KV + +Q E P +A G R + + T T+
Sbjct: 64 MAGVPYHSAQQYIDVLIEQGYKVAIAEQME-------DPKEAKGVVKREVVQVITPGTVV 116
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ E+N+LV + D GN FG ++ D+V G
Sbjct: 117 DSTK-------PDSENNFLVAL-DRSGND-------FG-------------LAYMDLVTG 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
EF + +L+ ++ G+ + + +++L Y P RV + +
Sbjct: 149 EFQ-----------VTTLNDFSMVCGEIRNLRAREVVLGYELPEQEERVFVSQMNLL--- 194
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
LS+ E + DV G+ S +E + +R++
Sbjct: 195 -----------------LSHVETELDDVQLLGDQLSELEK---------KTAGKLLRYVH 228
Query: 381 QFGLERIMCLG-ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
Q + + L A + ++M + T L++ N G ++G+L ++ T T
Sbjct: 229 QTQMRELSHLKKAHHYEICDFLQMDFA--TKASLDLTENARTGKKHGSLYWYLDETKTAM 286
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G RLLR W+ PL D I R D + + H + SD+T
Sbjct: 287 GGRLLRSWIQKPLVDLKRIRERQDIIQVFMD-------------HFFERSDLT------- 326
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---------MQAILYAGKQLQQLH 550
SL DI+R +R+ P + + + +++IL L
Sbjct: 327 -------DSLKGVYDIERLASRVSFGKINPKDLLQLGDTLGHVPTIKSIL--------LG 371
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSP---AVIGKAAKLLSTVNKEAADQGDLLNLMI 607
I + + ++ L RLI +A +P AVI + ++ T E DQ ++ +
Sbjct: 372 IGDPVLDVLIARLDELPELHRLITSAIAPEASAVITEG-NIIRTGFDEQLDQYRVV--LR 428
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--K 665
G +E+ AKE S I + ++ + V+ + L +PA+F K
Sbjct: 429 DGTGWIAEI--------EAKEREASGITGLKIDYNKKDGYYFHVTN-SQLSHVPAHFFRK 479
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
L ++ T++ R ++L A D+ A N E TI R +E G Y Q
Sbjct: 480 ATLKNSERFGTEELARIEG-DMLEARDKSA--NLEYTIFMR-----IREEVGKYIQRLQQ 531
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPND 784
QA+A +D L +LA+++ ++ RP+F HE +I I GRHPV++ ++ +++PN
Sbjct: 532 LAQAIATVDVLQSLASVAESQQLNRPLF---HEERRIAIDKGRHPVVEKVMGAQSYIPNS 588
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
+ ER+ Q+ITGPNM GKS Y+RQ+A+I I+AQ+GS+VPA AEL + D IYTR+GA
Sbjct: 589 IFMDEERD-IQLITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQKAELPIFDAIYTRIGA 647
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D + G+STF+ E+ EA++ +R T QSL++ DELGRGT+T+DG+A+A + ++Y+ +
Sbjct: 648 ADDLVSGQSTFMVEMMEANHAIRKATPQSLILFDELGRGTATYDGMALAQSIIEYIHDRT 707
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
LF THY ++ + T + HV+ L + D VT+L+K+ PG +
Sbjct: 708 GAKTLFATHYHELTALSETLT-RLENVHVATL-----------ERDGQVTFLHKIEPGPA 755
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR-VQNRSAKRDLLVKLSDQ----EQ 1019
+ S+G VA++A LP + RA I KLE + + + + K+++ ++++Q E+
Sbjct: 756 DKSYGIHVAKIAGLPEELLERADAILTKLEGQAQQVPLADTTPKKEVSSQVAEQMSLFEE 815
Query: 1020 EAQ 1022
EA+
Sbjct: 816 EAE 818
>gi|118593679|ref|ZP_01551054.1| DNA mismatch repair protein [Stappia aggregata IAM 12614]
gi|118433689|gb|EAV40351.1| DNA mismatch repair protein [Stappia aggregata IAM 12614]
Length = 908
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 262/932 (28%), Positives = 426/932 (45%), Gaps = 124/932 (13%)
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT 142
T + K TP+ Q +E+K PD LL +G + F EDAE+A+ LGI
Sbjct: 10 TRADSKVTPMMAQFLEIKAANPDSLLFYRMGDFYELFFEDAEVASAALGITLTKRGKHQG 69
Query: 143 ASIPTFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKA 197
A IP + VH + +L+ G +V V +QTE A +A G R + L T
Sbjct: 70 ADIPMCGVPVHAADDYLNKLIAKGHRVSVCEQTEDPA-EAKKRGSKSVVRRDVVRLVTPG 128
Query: 198 TLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
TL + G + NYL+ + +++ G DG V G+ +++STG
Sbjct: 129 TLTEERLLDAGSN------NYLMALT-------RLKGGSL-DGSAV-YGLAWIDMSTGSF 173
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
E + L A L +SP EL+L L +++E L A + V A D
Sbjct: 174 QVSETD----HQRLAADLAQVSPRELILSDNLLQESELRLTAEQAGGALSPVPRAFFDSS 229
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
LA + G T S E SA GI+
Sbjct: 230 TATDRLAHYFGVKTLDGFGTFSRAE------------LSAAAGILA-------------- 263
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
++++ L L R +G+ M + T LE+ R S G + G+LL ++ T+T
Sbjct: 264 YVEKTQLGERPPLDPPVRE-AGAGRMLIDPATRANLELSRTLS-GEKQGSLLATIDRTVT 321
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
GSRLL + PL + + I RLD V+ E+
Sbjct: 322 GGGSRLLASRLAGPLVNVDAIQHRLDGVAFFLEN-------------------------- 355
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+ + +L +PD+ R ++RI P + ++V Q + A L Q
Sbjct: 356 -EIMREGLRQTLKGAPDMARALSRIALNRGGPRDILSVAQGLEAARAVLDQT-------- 406
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFSE 615
T+ T+ + + +P +G L+T K D+ LL + I+ G ++
Sbjct: 407 SATAGTIPAEIAAARTSLEQAPHDLGSE---LTTALK---DEPPLLKRDGGFIATGYNAD 460
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN-----FKVPLNW 670
+ R +++ + L ++LG+R+L+ + + IE P+ P +
Sbjct: 461 LDELRSLRDESRKVIAKLQAEYSEELGLRSLKIKHNNVLGWFIEAPSAQTEKLTADPGRF 520
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ +R+ + E+ ++A A E + ++ K +AA L
Sbjct: 521 IHRQTMAGAMRFTTTELADLESKIASAGERSLAIELEIFERLAKAIIDAGEAIKAAAHGL 580
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL----DNFVPNDTN 786
+ LD ALA L++ +N+VRPV VDD I GRHPV++ L D+FV ND N
Sbjct: 581 SILDVSAALAKLAQEENYVRPV-VDDSRAFDIK--GGRHPVVEKALRKSGGDSFVANDAN 637
Query: 787 LHAERE----YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
L E + +ITGPNM GKS ++RQ ALI +MAQ+G +VPA++A + V+D +++R+
Sbjct: 638 LGPEAGEDIGHIWLITGPNMAGKSTFLRQNALIAVMAQMGGYVPATAAHIGVVDRLFSRV 697
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GA+D + +GRSTF+ E+ E + IL +SLVI+DE+GRGT+T DG++IA+AT+++L E
Sbjct: 698 GAADDLARGRSTFMVEMVETAAILNQAGDRSLVILDEIGRGTATFDGLSIAWATIEHLHE 757
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
+ LF THY ++ T +G + + ++ + G DV +L+++VPG
Sbjct: 758 VNRSRALFATHYHEL----TALSGKLERLSNATVSVKEWKG--------DVIFLHEIVPG 805
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ S+G +VA+LA LP S + R+ + ++LE
Sbjct: 806 AADRSYGIQVAKLAGLPVSVVERSKQVLSQLE 837
>gi|54310168|ref|YP_131188.1| DNA mismatch repair protein MutS [Photobacterium profundum SS9]
gi|81697302|sp|Q6LMU0.1|MUTS_PHOPR RecName: Full=DNA mismatch repair protein MutS
gi|46914609|emb|CAG21386.1| putative DNA mismatch repair protein MutS [Photobacterium profundum
SS9]
Length = 856
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 190/599 (31%), Positives = 307/599 (51%), Gaps = 77/599 (12%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ +N S G + TL +++HT T GSRLL+RW+ P+ D ++ RLDA
Sbjct: 268 LDAATRRNLELTQNLSGGFD-NTLASVLDHTATPMGSRLLKRWLHQPIRDTKQLNHRLDA 326
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
++ ++ + ++ VL +G D++R + R+
Sbjct: 327 IAAFKDT-------------------------GMFIEVAEVLHHMG---DLERILARLAL 358
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSA-------LLKRLILTAS 577
R+A P + +A M++ L + QL L D E + ++ +SA LL+R I+
Sbjct: 359 RSARPRD-LARMRSALQSLPQLADLLADIE-QPRIGELAKYSAPMDELCELLERAII--E 414
Query: 578 SPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMC 637
+P VI + D G +++ G +E+ R AK+ LD L
Sbjct: 415 NPPVIIR-------------DGG------VLAPGYNAELDEWRDLADGAKKFLDDLETRE 455
Query: 638 RKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLA 695
R+Q G+ +L+ F V G I + P ++ + + K RY PE+ D++
Sbjct: 456 REQHGIDSLKVGFNQVHGFFIQISRGQSHLAPDHYVRRQTLKNAERYIIPELKEHEDKVL 515
Query: 696 LANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVD 755
+ + + + W+ + + Q A AL+ LD L LA + N+ RP D
Sbjct: 516 SSKSKALGLEKKLWEELFDQLLPHLERLQNAASALSELDVLANLAERADTLNYCRPELTD 575
Query: 756 DHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALI 815
I I +GRHPV++ +L + F+ N T+LH +R IITGPNMGGKS Y+RQ ALI
Sbjct: 576 Q---TGIEIAAGRHPVVEQVLSEPFIANPTSLHHDRRML-IITGPNMGGKSTYMRQTALI 631
Query: 816 GIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLV 875
+MA VGSFVPA + ++ LD I+TR+GASD + GRSTF+ E+ E + IL N T++SLV
Sbjct: 632 ALMAHVGSFVPAEAVKIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATSKSLV 691
Query: 876 IVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSY 935
++DE+GRGTST+DG+++A+A+ ++L E M LF THY ++ ++ + G + H+
Sbjct: 692 LMDEIGRGTSTYDGLSLAWASAEWLAEKISAMTLFATHYFELTELPSMMDG-LANVHLDA 750
Query: 936 LTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ + ++ +++ V G + S+G VA LA +P + I RA +LE
Sbjct: 751 V-----------EHGDEIAFMHAVQEGAASKSYGLAVASLAGVPKAVIKRAKAKLTQLE 798
Score = 40.8 bits (94), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 40/203 (19%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
+TP+ QQ + +K + PD LL +G + F +DA+ A+++L I + IP
Sbjct: 9 HTPMMQQFLRIKAENPDTLLFYRMGDFYELFFDDAKRASQLLDITLTKRGSSNGQPIPMA 68
Query: 149 RLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
L H + +LV G V + +Q A GP R + + T T+
Sbjct: 69 GLPYHAVEGYLAKLVQQGVSVAICEQIGDPAT------SKGPVDRQVVRIVTPGTV---- 118
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF- 262
S+ + D V I G G+ +T D+ G F
Sbjct: 119 ------------SDEALLSERRDNLVAAIYQNSKGFGY-----------ATLDITSGRFM 155
Query: 263 -NDGFLRSGLEAVLLSLSPAELL 284
++ ++A L SPAELL
Sbjct: 156 LSEPETEEAMQAELQRTSPAELL 178
>gi|417792169|ref|ZP_12439560.1| DNA mismatch repair protein MutS [Cronobacter sakazakii E899]
gi|429120415|ref|ZP_19181092.1| DNA mismatch repair protein MutS [Cronobacter sakazakii 680]
gi|449307095|ref|YP_007439451.1| DNA mismatch repair protein MutS [Cronobacter sakazakii SP291]
gi|333953733|gb|EGL71644.1| DNA mismatch repair protein MutS [Cronobacter sakazakii E899]
gi|426325158|emb|CCK11829.1| DNA mismatch repair protein MutS [Cronobacter sakazakii 680]
gi|449097128|gb|AGE85162.1| DNA mismatch repair protein MutS [Cronobacter sakazakii SP291]
Length = 853
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 259/931 (27%), Positives = 415/931 (44%), Gaps = 166/931 (17%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ ++LK ++PD+LL +G + F +DA+ A+++L I A A
Sbjct: 10 HTPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMA 69
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LVN G V + +Q A GP R + + T T+
Sbjct: 70 GVPHHAVENYLAKLVNLGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEA 123
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L + D GF G ++IS+G E
Sbjct: 124 LLQERQD------NLLAAIWQD------------SKGF----GYATLDISSGRFRVSEPQ 161
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D R + A L +PAELL + ++
Sbjct: 162 D---RETMAAELQRTNPAELLYAEDFAE-------------------------------- 186
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQ------GNHRSAIEGIMNMPD--LAVQALALT 375
MSL E + +D Q G G+ N P A L
Sbjct: 187 ---MSLIEGRRGLRRRPLWEFELDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQY 243
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
++ ++ L I + R G + + A T + LE+ +N + G E TL +++ T
Sbjct: 244 VKDTQRTSLPHIRSITME-RQQDG---IIMDAATRRNLEITQNLAGGVE-NTLASVLDCT 298
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
+T GSR+L+RW+ P+ D +++ R A++ + E Y T ++
Sbjct: 299 VTPMGSRMLKRWLHMPVRDTSVLRHRQQAIAALME----YSTE---------------IQ 339
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH----- 550
P VL +G D++R + R+ RTA P + +A M+ +A +QL L+
Sbjct: 340 P--------VLRQVG---DLERILARLALRTARPRD-LARMR---HAFQQLPMLNTLLAD 384
Query: 551 IDGEY----REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
ID EY RE++ LL+R I+ A P V+ + D G
Sbjct: 385 IDAEYVQTLREQMGDFAELRDLLERAIIEA--PPVLVR-------------DGG------ 423
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF 664
+I+ G E+ R A + LD L R++LG+ L+ F +V G + +
Sbjct: 424 VIAPGYHEELDEWRALADGATDYLDRLEIREREKLGIDTLKVGFNAVHGYFIQVSRGQSH 483
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP+++ + + K RY PE+ D++ + + + + +D + AE Q
Sbjct: 484 MVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLAELQ 543
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
+ ALA LD L LA + N+ P D +P I + GRHPV++ +L + F+ N
Sbjct: 544 KSAAALAELDVLTNLAERADTLNYHCPTLTD--KP-GIRLVEGRHPVVERVLNEPFIANP 600
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
+L +R IITGPNMGGKS Y+RQ ALI +MA +GSFVPA AE+ +D I+TR+GA
Sbjct: 601 LSLSPQRRML-IITGPNMGGKSTYMRQTALIVLMAYIGSFVPAEQAEIGPIDRIFTRVGA 659
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A + L
Sbjct: 660 ADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLANRI 719
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
K + LF THY ++ + K G V H+ + + + +++ V G +
Sbjct: 720 KALTLFATHYFELTQLPEKMEG-VANVHLDAI-----------EHGDTIAFMHSVQDGAA 767
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
S+G VA LA +P I RA +LE+
Sbjct: 768 SKSYGLAVAALAGVPKEVIKRARQKLRELES 798
>gi|419800656|ref|ZP_14325927.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0449]
gi|385694484|gb|EIG25085.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0449]
Length = 849
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 257/931 (27%), Positives = 427/931 (45%), Gaps = 168/931 (18%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K +P QQ +++K YPD L+ +G + F EDA AA++L I + ++
Sbjct: 4 EKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ L+ G+KV + +Q E P +A G R + + T T+
Sbjct: 64 MAGVPYHSAQQYIDVLIEQGYKVAIAEQME-------DPKEAKGVVKREVVQVITPGTVV 116
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ E+N+LV + D GN G+ +++ TG+
Sbjct: 117 DSTK-------PDSENNFLVAL-DRSGN---------------DFGLAYMDLVTGEFQVT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
ND + G + +L E++LG L +Q E++ ++ + VE A D + G
Sbjct: 154 TLNDFTMVCG---EIRNLRAREVVLGYALPEQEERVFISQMNLLLS-HVETALDDVQLLG 209
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
D LS E + Q H++ M +L+ HLK
Sbjct: 210 ---------------DQLSELEKKTAGKLLQYVHQT------QMRELS---------HLK 239
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ A + ++M + T L++ N G ++G+L ++ T T G
Sbjct: 240 K----------AHHYEICDFLQMDFA--TKASLDLTENARTGKKHGSLYWYLDETKTAMG 287
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLR W+ PL D I R D + + H + SD+T
Sbjct: 288 GRLLRSWIQKPLVDLKRIRERQDIIQVFMD-------------HFFERSDLT-------- 326
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---------MQAILYAGKQLQQLHI 551
SL DI+R +R+ P + + + +++IL L I
Sbjct: 327 ------DSLKGVYDIERLASRVSFGKINPKDLLQLGDTLGHVPTIKSIL--------LGI 372
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSP---AVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ + ++ L RLI +A +P AVI + ++ T E DQ ++ +
Sbjct: 373 GDPVLDVLIARLDELPELHRLITSAIAPEASAVITEG-NIIRTGFDEQLDQYRVV--LRD 429
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KV 666
G +E+ AKE S I + ++ + V+ + L +PA+F K
Sbjct: 430 GTGWIAEI--------EAKEREASGITGLKIDYNKKDGYYFHVTN-SQLSHVPAHFFRKA 480
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
L ++ T++ R ++L A D+ A N E TI R +E G Y Q
Sbjct: 481 TLKNSERFGTEELARIEG-DMLEARDKSA--NLEYTIFMR-----IREEVGKYIQRLQQL 532
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDT 785
QA+A +D L +LA+++ ++ RP+F HE +I I GRHPV++ ++ +++PN
Sbjct: 533 AQAIATVDVLQSLASVAESQQLNRPLF---HEERRIAIDKGRHPVVEKVMGAQSYIPNSI 589
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
+ ER+ Q+ITGPNM GKS Y+RQ+A+I I+AQ+GS+VPA AEL + D IYTR+GA+
Sbjct: 590 FMDEERD-IQLITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQRAELPIFDAIYTRIGAA 648
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D + G+STF+ E+ EA++ +R T QSL++ DELGRGT+T+DG+A+A + ++Y+ +
Sbjct: 649 DDLVSGQSTFMVEMMEANHAIRKATPQSLILFDELGRGTATYDGMALAQSIIEYIHDRTG 708
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ + + + HV+ L + D VT+L+K+ PG ++
Sbjct: 709 AKTLFATHYHELTALSETLS-RLENVHVATL-----------ERDGQVTFLHKIEPGPAD 756
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
S+G VA++A LP + RA I KLE +
Sbjct: 757 KSYGIHVAKIAGLPEELLERADAILTKLEGQ 787
>gi|254489938|ref|ZP_05103133.1| DNA mismatch repair protein MutS [Methylophaga thiooxidans DMS010]
gi|224465023|gb|EEF81277.1| DNA mismatch repair protein MutS [Methylophaga thiooxydans DMS010]
Length = 842
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 266/923 (28%), Positives = 419/923 (45%), Gaps = 161/923 (17%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVH 153
QQ + +K ++P+ LL +G + F +DA AA++L I + A IP + H
Sbjct: 3 QQYLRIKAEHPEFLLFYRMGDFYELFFDDAHKAAELLDITLTARGSSNGAPIPMAGVPYH 62
Query: 154 -----VRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATL--EAAEDV 205
+ RL+ G V + +Q P K+ GP R + + T TL EA D
Sbjct: 63 AADGYLSRLIKLGESVAICEQI-------GDPAKSKGPVEREVVRVLTPGTLTEEALLD- 114
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
N LV V + G R G+ + EIS+G V E +
Sbjct: 115 -------SRNENLLVAVSHNKG----------------RYGLASAEISSGRFVVSELDS- 150
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA- 324
S ++A L L AE+L+ D F GA A
Sbjct: 151 --LSDIQAELARLQAAEILISD------------------------TELDDF---GAFAK 181
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHLKQF- 382
++ +L E E +N + E N + ++G + DLA+QA I + +Q
Sbjct: 182 QLRALPEWHFEQKAANRR-----LCEHFN-TTDLKGFGCDELDLAIQAAGCLINYAQQTH 235
Query: 383 --GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
L + + F S + L + + LE+ +N S G E TL+ +++ T T G
Sbjct: 236 RTALPHLRRINVEFTRDS----IKLDPPSRKNLELEQNLSGGRE-NTLISVLDRTATPMG 290
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+R+LRRW+ P+ D+ ++ R + + + + QH +
Sbjct: 291 ARMLRRWLMRPVRDQKILRQRQEVIQQF------------IDQH-------------HFT 325
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ--AILYAGKQLQQLHIDGEYREK 558
++ SLG DI+R +TRI RTA P +F+ + Q IL A QL +
Sbjct: 326 DCHDLMRSLG---DIERILTRIALRTARPRDFMHLRQMLEILPAMHQLLK---------- 372
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFSEV 616
+LH L R +G ++LL+ + D+ +L + +I G +E+
Sbjct: 373 -PMTSLHIRHLDR---------TLGTFSELLTLLQTAIIDEPPVLIRDGGVIKPGFNNEL 422
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPA--NFKVPLNWAK 672
R Q+A LD L R++ G+ L+ + V G + IEL + VP + +
Sbjct: 423 DHLRDLHQNASGFLDKLEKEERERTGVSTLKVGYNKVHG--YFIELSRAHDIDVPTEYVR 480
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ K RY +PE+ +Q+ ANE+ + ++ +D A + + ALA
Sbjct: 481 RQTLKNAERYITPELKAFEEQVLSANEKALALEKSLYDGLFDRVAPELAALEHSAAALAE 540
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAERE 792
LD L LA + ++V P F D IHI +GRHPV++ F ND L E+
Sbjct: 541 LDVLANLAERAETLDYVAPSFSD---VPGIHIENGRHPVVEVCQPHPFCANDLKLSGEQP 597
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNMGGKS Y+RQ ALI +MA +GS+VPA+ A + +D ++TR+GASD + GR
Sbjct: 598 ML-IITGPNMGGKSTYMRQTALIVLMAHMGSYVPATKAVIGPVDQVFTRIGASDDLASGR 656
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF+ E+NEA+ IL N T SLV++DE+GRGTST DG+A+A++ + L+ LF T
Sbjct: 657 STFMVEMNEAANILNNATQHSLVLMDEIGRGTSTFDGLALAWSCAEKLIRDIGAYTLFAT 716
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFK 971
HY ++ + F + + +D+ D + +L+++ G + S+G +
Sbjct: 717 HYFEMTQLPALFEKARNVH-------------LDAIEHGDKIVFLHQLKDGAANQSYGLQ 763
Query: 972 VAQLAQLPPSCISRATVIAAKLE 994
VAQLA +P I+ A V +LE
Sbjct: 764 VAQLAGVPDDVIAAARVKLQQLE 786
>gi|348026753|ref|YP_004766558.1| DNA mismatch repair protein mutS [Megasphaera elsdenii DSM 20460]
gi|341822807|emb|CCC73731.1| DNA mismatch repair protein mutS [Megasphaera elsdenii DSM 20460]
Length = 857
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 235/932 (25%), Positives = 406/932 (43%), Gaps = 172/932 (18%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
QQ +E+K + D +L +G + F +DA A++ L G +P
Sbjct: 3 QQYMEVKEQCQDKILFFRLGDFYEMFFDDALTASRELDLTLTGRAGGNKEKVPMCGVPFH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
+ ++ RLV+ G+KV + +Q E + G R + + T T+ V
Sbjct: 63 SADTYIERLVHKGYKVAICEQMEDPKLAK------GLVKRKIIKVITPGTITLENAVASK 116
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
++ NY+ C+ + +G L + ++++TG+ ++ + +
Sbjct: 117 QN------NYIGCLNEKEGI----------------LSMALMDVTTGECLWADCAASVME 154
Query: 269 SGLEAVLLSLSPAELL---LGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
L +L P+EL+ +G+ + E + A +C
Sbjct: 155 DSLFDILAVYEPSELIYAHMGKDMDAVREYLRSHLA--------QC-------------- 192
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG--IMNMPDLAVQALALTIRHLKQFG 383
++ E +D + +E P + + G I + D + I H+
Sbjct: 193 --TVTEFPADDNVDYSEQARSYFPPEDFAAATAAGDCIGMLLDYVSDVMQSDISHIN--- 247
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
S + + + A +L+ LE+ +N +G GTLL +++ T T G RL
Sbjct: 248 ---------SLEHIDNDRRLVVDAASLRHLEITQNVRDGGRRGTLLDVLDKTQTAMGGRL 298
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LR+W+ PL I+ R DAV + H+ D V
Sbjct: 299 LRKWLEAPLIRIADITRRQDAVEDFV-------------LHEIMRQDTADV--------- 336
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
L R D +R +TRI T +P + +A+ +++
Sbjct: 337 -----LNRIYDFERILTRIETGTVSPKDLVALRESL------------------------ 367
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM----------------I 607
A++ +L + G +A LL +N D+ +L+ +
Sbjct: 368 ---AVIPQL-----KNVLAGASADLLHNLNDRLQTHDDVYDLLCRGIKDEPGLVIRNGGV 419
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPANFKV 666
I +G E+ R ++ L L +++ G++ + + V G I +
Sbjct: 420 IRDGFSPELDEIRSIAANSHAFLQELEEKEKEKTGIKMKIGYTKVFGYYFEISHANTKPI 479
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P + + + RY +PE+ ++ + E + + + ++ G+ QA
Sbjct: 480 PDYYVRKQTLVNAERYITPELKEFEVKVLTSQERMLALEYKLFGDIRRQIQGHIPAMQAT 539
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDT 785
+A+A +DCL++LA + + +VRP + I I GRHP+++ L D FVPND
Sbjct: 540 ARAIARIDCLYSLACAAYDNRYVRPSL---NTKATISIKDGRHPIIEKYLKDELFVPNDV 596
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
L+ E +ITGPNM GKS Y+RQVA++ +MAQVGSF+PA + +D I+TR+GAS
Sbjct: 597 TLNHEDHEILVITGPNMAGKSTYMRQVAVLVLMAQVGSFIPAKEGSICPVDRIFTRIGAS 656
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D I G+STF+ E+ E SYIL++ T++SL+I+DE+GRGTST DG++IA A ++Y L+H
Sbjct: 657 DDILTGQSTFMMEMKEVSYILKHATSRSLLILDEIGRGTSTFDGMSIARAVIEYCLKHIH 716
Query: 906 CMVLFVTHYPKI---ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
+ LF THY ++ AD K +Y + K G +++ +L +++PG
Sbjct: 717 ALTLFATHYHELIAMADDSPKIK--------NYTVAVKERG-------KNIKFLRRIIPG 761
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ S+G VA+LA LP S + RA VI LE
Sbjct: 762 GADRSYGLHVARLAGLPESLLKRADVILEDLE 793
>gi|146418998|ref|XP_001485464.1| hypothetical protein PGUG_03193 [Meyerozyma guilliermondii ATCC 6260]
Length = 1198
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 257/956 (26%), Positives = 415/956 (43%), Gaps = 122/956 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+T P P TL IP + K+T E+Q E+K D ++ + G + +
Sbjct: 283 RTMDDPNYDPRTLY-IPQSAWS-----KFTAFEKQYWEIKGVMWDTVVFFKKGKFYELYE 336
Query: 121 EDAEMAAKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTET---AAI 175
DA +A L I N A IP + ++ G+KV V Q E+ +
Sbjct: 337 NDATIANSEFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVDQKESLLAKEM 396
Query: 176 KAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNG 235
+ G + R L+ + T TL D+ D S Y + +
Sbjct: 397 RGGGTKEEKIIKRELTGVLTGGTL---TDLNMLSDDM---STYCLSI------------- 437
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTE 294
FD GVV V+ +T ++ + +F D + LE ++ + P E++ + LS
Sbjct: 438 ---KQFDNWFGVVFVDTATSELNFYQFEDDNECTKLETLVTHVRPKEVICEKHNLSSTAT 494
Query: 295 KMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH 354
K+L A P++ + F Y+ E +S+ D+ + N+
Sbjct: 495 KILKYTAQPSNQIWNTLNPNTEFWD----------YDTTLEKLVSSKYYDATDLDDFSNY 544
Query: 355 RSAIEGIMNMPDLAVQALALTIRHLKQFGLE-RIMCLGASFRSLSGSME----MTLSANT 409
A+ + A A + +LK L+ IM +G + R + M L T
Sbjct: 545 PDALIAFKDKNQYAFSAFGGLLSYLKFLKLDHNIMTMG-NIREYQITTRLAKNMILDGIT 603
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+L N+ +GS+ GTL ++N + +G R+L+ WV +PL + I+ RLD+V
Sbjct: 604 LNNLEILTNSFDGSDKGTLFKLLNRAQSPFGKRMLKNWVLNPLMVSSDINDRLDSV---- 659
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
Y E D IL L L PD++R I R +
Sbjct: 660 ----EYLMGEGAEIKD---------------ILEKSLLGL---PDLERLIARTHSKNIKF 697
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
+F+ +++ LQ L K K +L K L G +L
Sbjct: 698 KDFLKLIEGFEKVCGTLQNL--------KDFVKESCGSLYKYL---------QGFPTELK 740
Query: 590 STVN--KEAADQGDLLNLMII-SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL 646
S VN ++A D+ + LN +++ + G + ++ ++ L+ + +K+ +
Sbjct: 741 SCVNEWEDAFDRSEALNDVVVPATGVDESFDASSDRMKKLEDILNEHLRKYKKEYRSNEI 800
Query: 647 EFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+ +LIE+P K +P +W ++ ST K R+ SPEV +L E +VC
Sbjct: 801 CYKDSGKEIYLIEVPNKVKNIPSDWHQMGSTSKVKRFWSPEVKKLARELMEQRETHKMVC 860
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIH 763
+ F +Y +++ + LA +DC+ AL S + RP FV+ + I
Sbjct: 861 ETLRFRMYERFCKHYKVWKSTIHVLANIDCIIALTKTSETLGQPSCRPQFVEADTGL-ID 919
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
R+P + F+PND +L + + ++TG N GKS +R A+ +M+Q+G
Sbjct: 920 FKDLRNPCF--VTSGEFIPNDVSLGGDEAHFGLLTGANAAGKSTLMRTTAMAVVMSQIGC 977
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
FVPAS A L +D I TR+GA+D+I QG+STF EL+E IL N TA+SLVI+DELGRG
Sbjct: 978 FVPASHARLTPVDKIMTRLGANDNILQGKSTFFVELSETKKILANATAKSLVILDELGRG 1037
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
S+ DG AIA A L +L H + + F THY GS+ V H +
Sbjct: 1038 GSSSDGFAIAEAVLHHLATHVQPLGFFATHY-----------GSL----VLSFEGHPQIR 1082
Query: 944 PMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
P+ ++ +++T+LYK+ G + SFG VA + + + +A V A K E
Sbjct: 1083 PLRMAIVIDQNSRNITFLYKLEDGTAPGSFGMNVAAMCGISSEIVDQAEVAAIKYE 1138
>gi|389839817|ref|YP_006341901.1| DNA mismatch repair protein MutS [Cronobacter sakazakii ES15]
gi|387850293|gb|AFJ98390.1| DNA mismatch repair protein MutS [Cronobacter sakazakii ES15]
Length = 853
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 259/931 (27%), Positives = 415/931 (44%), Gaps = 166/931 (17%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ ++LK ++PD+LL +G + F +DA+ A+++L I A A
Sbjct: 10 HTPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMA 69
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LVN G V + +Q A GP R + + T T+
Sbjct: 70 GVPHHAVENYLAKLVNLGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEA 123
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L + D GF G ++IS+G E
Sbjct: 124 LLQERQD------NLLAAIWQD------------SKGF----GYATLDISSGRFRVSEPQ 161
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D R + A L +PAELL + ++
Sbjct: 162 D---RETMAAELQRTNPAELLYAEDFAE-------------------------------- 186
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQ------GNHRSAIEGIMNMPD--LAVQALALT 375
MSL E + +D Q G G+ N P A L
Sbjct: 187 ---MSLIEGRRGLRRRPLWEFELDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQY 243
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
++ ++ L I + R G + + A T + LE+ +N + G E TL +++ T
Sbjct: 244 VKDTQRTSLPHIRSITME-RQQDG---IIMDAATRRNLEITQNLAGGVE-NTLASVLDCT 298
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
+T GSR+L+RW+ P+ D +++ R A++ + E Y T ++
Sbjct: 299 VTPMGSRMLKRWLHMPVRDTSVLRHRQQAIAALME----YSTE---------------IQ 339
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH----- 550
P VL +G D++R + R+ RTA P + +A M+ +A +QL L+
Sbjct: 340 P--------VLRQVG---DLERILARLALRTARPRD-LARMR---HAFQQLPTLNTLLAD 384
Query: 551 IDGEY----REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
ID EY RE++ LL+R I+ A P V+ + D G
Sbjct: 385 IDAEYVQTLREQMGDFAELRDLLERAIIEA--PPVLVR-------------DGG------ 423
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF 664
+I+ G E+ R A + LD L R++LG+ L+ F +V G + +
Sbjct: 424 VIAPGYHEELDEWRALADGATDYLDRLEIREREKLGIDTLKVGFNAVHGYFIQVSRGQSH 483
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP+++ + + K RY PE+ D++ + + + + +D + AE Q
Sbjct: 484 MVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLAELQ 543
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
+ ALA LD L LA + N+ P D +P I + GRHPV++ +L + F+ N
Sbjct: 544 KSAAALAELDVLTNLAERADTLNYHCPTLTD--KP-GIRLVEGRHPVVERVLNEPFIANP 600
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
+L +R IITGPNMGGKS Y+RQ ALI +MA +GSFVPA AE+ +D I+TR+GA
Sbjct: 601 LSLSPQRRML-IITGPNMGGKSTYMRQTALIVLMAYIGSFVPAEQAEIGPIDRIFTRVGA 659
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A + L
Sbjct: 660 ADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLANRI 719
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
K + LF THY ++ + K G V H+ + + + +++ V G +
Sbjct: 720 KALTLFATHYFELTQLPEKMEG-VANVHLDAI-----------EHGDTIAFMHSVQDGAA 767
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
S+G VA LA +P I RA +LE+
Sbjct: 768 SKSYGLAVAALAGVPKEVIKRARQKLRELES 798
>gi|300113486|ref|YP_003760061.1| DNA mismatch repair protein MutS [Nitrosococcus watsonii C-113]
gi|299539423|gb|ADJ27740.1| DNA mismatch repair protein MutS [Nitrosococcus watsonii C-113]
Length = 863
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 265/945 (28%), Positives = 424/945 (44%), Gaps = 149/945 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNF 140
K +TP+ QQ + +K +YP LL+ +G + F +DA+ AA++L I
Sbjct: 7 QKPHTPMMQQYLRIKAEYPATLLLYRMGDFYELFYDDAQRAAELLDITLTSRGQSAGEPI 66
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLE 200
A IP L+ ++ RLV G V + +Q A GP R ++ + T T+
Sbjct: 67 PMAGIPYHALDSYLARLVRQGESVAICEQVGDPATSK------GPVERQVARIITPGTVT 120
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D L+ + +G+V FG + D+ G
Sbjct: 121 EEALLEARRDN-------LLAALQREGDV-------FG-------------FAVLDLCSG 153
Query: 261 EFNDGFLRSGLEAVLLS----LSPAELLLGQPLS-----KQTEKMLLAYAGPASNVRVEC 311
FN L E+ +S + PAELL+ + L+ +T+ ++ P + E
Sbjct: 154 RFN--ILEVASESATISELARIRPAELLVSEDLALTLVDSKTDAVVRPL--PPWHFDRES 209
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
A R L + G L+ + M ++AI A
Sbjct: 210 AQR-------------QLCQQFGTQNLAGFGCEEM--------KTAIA--------AAGC 240
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
L ++ ++ L I L + S + L +T + LE+ + S S + TL+ +
Sbjct: 241 LLHYVQDTQRAHLPHIHALQVERQETS----IILDPSTRRNLELEESLSGHSNHNTLIAV 296
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T T GSRLLRR++ PL D+ L+ R A++ + E G D
Sbjct: 297 LDRTATAMGSRLLRRYLHRPLRDQTLLKQRQQALAALLEG----------GLTD------ 340
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
IL +L +G DI+R ++R+ R+A P + + + QA+ K
Sbjct: 341 ---------ILQKLLRGIG---DIERILSRVALRSARPRDLVQLRQALGLLPK------- 381
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIIS 609
RE + S LL+ L +G KL + + + +L + +I+
Sbjct: 382 ---IRESLLQLNRDSILLQSL------QEDLGPFPKLHELLQRAICENPPVLIRDGGVIA 432
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVP 667
G SE+ R +A + L L R++ + L+ + V G I + P
Sbjct: 433 LGFDSELDELRHLSGNAGQFLVELEQRERERTKIPTLKIGYNKVHGYYLEITRAQAHQAP 492
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
++ + + K RY +PE+ DQ+ A E +A ++ L++F +A
Sbjct: 493 PDYIRRQTLKGAERYITPELKGFEDQVLSARERALAREKALYEGLLEQFMEPLPALRACA 552
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNL 787
ALA LD LH LA ++ +V P+ D +P I I GRHPV++ L + FVPND L
Sbjct: 553 NALAELDVLHNLAERAKTLEYVVPLLSD--QP-GILIEEGRHPVVEQTLENPFVPNDLTL 609
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA A + +D I+TR+GA+D
Sbjct: 610 QETRRML-IITGPNMGGKSTYMRQTALIVLLAHIGSFVPARRAVIGPIDRIFTRIGAADD 668
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ GRSTF+ E+ E + IL N T SLV++DE+GRGTST DG+++A+A YL+ + + +
Sbjct: 669 LAGGRSTFMVEMTETANILHNATQYSLVLLDEVGRGTSTFDGLSLAWAVASYLVNNARSL 728
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ + G V H++ T HK + + +L+ V G + S
Sbjct: 729 TLFATHYFELTALPEHLDG-VANLHLTA-TEHK----------ERIVFLHAVKEGPASQS 776
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR-VQNRSAKRDLL 1011
+G +VA LA +P I++A KLE+ + A+ DLL
Sbjct: 777 YGLQVAALAGVPQEVIAQARQRLMKLESNAEQKSTHGDGAQLDLL 821
>gi|336426864|ref|ZP_08606872.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010504|gb|EGN40487.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 882
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 247/947 (26%), Positives = 436/947 (46%), Gaps = 165/947 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMTAS 144
TP+ QQ +E K +Y D +L +G + F EDA E+ + G ++
Sbjct: 5 TPMMQQYMETKRQYADCILFYRLGDFYEMFFEDALTVSKELELTLTGKNCGMEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT---LEA 201
+P + ++ RLV+ G+KV + +Q E + G R + + T T +++
Sbjct: 65 VPYHAVEGYLSRLVSKGYKVAICEQVEDPKLAK------GLVKREVVRIVTPGTNLNIQS 118
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
E+ ++N+L+C+ F + G+ +++TGD + E
Sbjct: 119 LEE---------NKNNFLMCIA----------------YFAGKTGISVADVTTGDYLLTE 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLL-------GQPLSKQTEKMLLAYAGPASNVRVECASR 314
D R L+ ++ + P+E++ G L E++ +A + + R
Sbjct: 154 VEDN--RKLLDEIMKYM-PSEIICNDAFLVSGVELEDLKERLGIAIYSLEPHYFDDDLCR 210
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
C L ++ G ++LS + V E N A +++ Q + L
Sbjct: 211 KC------------LLKHFGVNSLSG-----LGVDEFPNGVIAAGALLSYL-YDTQKIPL 252
Query: 375 T-IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
+ H++ + R M L +S R ++E+T E LR + G+LL +++
Sbjct: 253 SHFTHIEPYLTNRYMLLDSSTRR---NLELT---------ETLREKQ---KRGSLLWVLD 297
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T T G+R+LR ++ PL + + RLDAV N+ +
Sbjct: 298 KTKTAMGARMLRSFLEQPLIHKTEMEERLDAVEAFC------------------NNPLAR 339
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLH 550
E + Y L D++R + ++ ++TA P + IA M+ + + L++L
Sbjct: 340 DELREY---------LNPIYDLERLLGKVSYKTANPRDLIAFRNSMEMLPHIKTVLKELP 390
Query: 551 IDGEYREKVTSKTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
GE +K+ + L LI + P I + +
Sbjct: 391 --GEANQKIEEEIDGLEDLFALIGESIEEEPPITIREGG--------------------M 428
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--K 665
I G ++ R+A K L L N R++ G++NL + +E+ ++
Sbjct: 429 IREGYNEDIDTLRRAKTEGKNWLADLENTERERTGIKNLRVKYNKVFGYYLEVTKSYLNM 488
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGGYYAE 722
VP ++ + + RY +P + D + A ++L C +D F + + G
Sbjct: 489 VPEDYVRKQTLTNAERYTTPRLKELEDTILNAEDKL---CTLEYDLFCEIRDQIAGEIER 545
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFV 781
Q +A+A LD + + ++ + RP +E IHI GRHPV++ ++ D F+
Sbjct: 546 IQTTAKAVARLDVFCSFSLVAEQNQYTRPKL---NEKGLIHIKDGRHPVVEKMIEHDMFI 602
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PNDT+L +ITGPNM GKS Y+RQ ALI +MAQ+GSFVPA A++ ++D I+TR
Sbjct: 603 PNDTHLDNNTRQIAVITGPNMAGKSTYMRQTALIVLMAQIGSFVPARQADIGIVDRIFTR 662
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD + G+STF+ E++E + ILRN T SL+I+DE+GRGTST DG++IA+A ++++
Sbjct: 663 VGASDDLASGQSTFMVEMSEVANILRNATRNSLLILDEIGRGTSTFDGLSIAWAVIEHIS 722
Query: 902 EHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
K LF THY ++ +++ K + +V Y ++ + K D D+ +L K+
Sbjct: 723 NRKLLGAKTLFATHYHELTELEGKMS-NVNNYCIA----------VKEKGD-DIVFLRKI 770
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQNRS 1005
+ G ++ S+G +VA+LA +P I RA I +L + +++ +VQ+ S
Sbjct: 771 IKGGADKSYGIQVARLAGVPDLVIDRAKEIVEQLSDNDITEKVQSIS 817
>gi|423346573|ref|ZP_17324261.1| DNA mismatch repair protein mutS [Parabacteroides merdae
CL03T12C32]
gi|409219724|gb|EKN12684.1| DNA mismatch repair protein mutS [Parabacteroides merdae
CL03T12C32]
Length = 879
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 256/924 (27%), Positives = 436/924 (47%), Gaps = 144/924 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA A++LGI N A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVTGAEILGIVQTKKANGPGQTIEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + + GK DV G+ ++ISTG+ + E
Sbjct: 120 ILNHK-----ENNFLAAI-----HFGK----------DV-CGIAFLDISTGEFLTAEGTV 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP FI L
Sbjct: 159 DYV----DKLLNNFSPKEVLVERGSRKRFEEAF----GPR-----------FFIF--ELD 197
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ + E + L + E +N+ +G G+ ++ L V A + +L Q
Sbjct: 198 DWVFTSEAANDRLLKHFETKNL----KGF------GVQHLK-LGVVASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT-LLHIMNHTLTIYGSRL 443
I + S + + L T++ LE++ S +E GT LL +++ T++ GSR+
Sbjct: 247 THISHI-TSLSRIEEDRYVRLDKFTVRSLELV---STMNEEGTSLLDVLDKTVSPMGSRM 302
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LRRW+ PL D I R D V E +H P+ +L
Sbjct: 303 LRRWILFPLKDVKPIHERQDVV-------------EYFFRH-----------PEVKELLE 338
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI--DGEYREKVTS 561
L +G D++R I+++ +P E + ++ L A + +++ D ++
Sbjct: 339 EKLEQIG---DLERIISKVAVGRVSPREVVQ-LKVALRAIEPIKEACTASDEPSLCRIGE 394
Query: 562 KTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
+ AL++ I + P+++ + + + VN E D L + S + +
Sbjct: 395 QLNACALIRDRIEKEINNDPPSLLNRGGVIATGVNAEL----DELRAIAYSGKDYLLKVQ 450
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNST 676
AR E+D L + ++G N+ + IE+ + KVP W + +
Sbjct: 451 AR--------EID-LTGISSLKIGFNNV-------FGYYIEVRNAYKDKVPAEWIRKQTL 494
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
RY + E+ +++ A E++ + ++ + Y Q + LDCL
Sbjct: 495 VNAERYITEELKEYEEKILGAEEKILSLEARLFNELVLCLSEYIPPIQMNANLIGRLDCL 554
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYC 794
+ A ++ + ++RP D ++ I I +GRHPV++ L + ++ ND L E++
Sbjct: 555 LSFAKVAESNRYIRP---DVNDSQVIDIKAGRHPVIEKQLPIGEPYIANDVYLDDEKQQI 611
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS +RQ ALI +MAQ+G FVPA A + ++D I+TR+GASD+I G ST
Sbjct: 612 IIITGPNMAGKSALLRQTALITLMAQIGCFVPAECARIGIVDKIFTRVGASDNISVGEST 671
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFVT 912
F+ E+NEAS IL N +++SLV+ DELGRGTST+DG++IA+A ++Y+ EH + LF T
Sbjct: 672 FMVEMNEASDILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNARAKTLFAT 731
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ +++ F + Y+VS + + V +L K+VPG SE SFG V
Sbjct: 732 HYHELNEMEASFK-RIKNYNVSV-----------KEVNNKVIFLRKLVPGGSEHSFGIHV 779
Query: 973 AQLAQLPPSCISRATVIAAKLEAE 996
A++A +P S + R+ I +LE E
Sbjct: 780 AKMAGMPKSIVKRSNEILKQLETE 803
>gi|423723128|ref|ZP_17697281.1| DNA mismatch repair protein mutS [Parabacteroides merdae
CL09T00C40]
gi|409241553|gb|EKN34321.1| DNA mismatch repair protein mutS [Parabacteroides merdae
CL09T00C40]
Length = 879
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 256/924 (27%), Positives = 436/924 (47%), Gaps = 144/924 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA A++LGI N A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVTGAEILGIVQTKKANGPGQTIEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + + GK DV G+ ++ISTG+ + E
Sbjct: 120 ILNHK-----ENNFLAAI-----HFGK----------DV-CGIAFLDISTGEFLTAEGTV 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP FI L
Sbjct: 159 DYV----DKLLNNFSPKEVLVERGSRKRFEEAF----GPR-----------FFIF--ELD 197
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ + E + L + E +N+ +G G+ ++ L V A + +L Q
Sbjct: 198 DWVFTSEAANDRLLKHFETKNL----KGF------GVQHLK-LGVVASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT-LLHIMNHTLTIYGSRL 443
I + S + + L T++ LE++ S +E GT LL +++ T++ GSR+
Sbjct: 247 THISHI-TSLSRIEEDRYVRLDKFTVRSLELV---STMNEEGTSLLDVLDKTVSPMGSRM 302
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LRRW+ PL D I R D V E +H P+ +L
Sbjct: 303 LRRWILFPLKDVKPIHERQDVV-------------EYFFRH-----------PEVKELLE 338
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI--DGEYREKVTS 561
L +G D++R I+++ +P E + ++ L A + +++ D ++
Sbjct: 339 EKLEQIG---DLERIISKVAVGRVSPREVVQ-LKVALRAIEPIKEACTASDEPSLCRIGE 394
Query: 562 KTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
+ AL++ I + P+++ + + + VN E D L + S + +
Sbjct: 395 QLNACALIRDRIEKEINNDPPSLLNRGGVIATGVNAEL----DELRAIAYSGKDYLLKVQ 450
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNST 676
AR E+D L + ++G N+ + IE+ + KVP W + +
Sbjct: 451 AR--------EID-LTGISSLKIGFNNV-------FGYYIEVRNAYKDKVPAEWIRKQTL 494
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
RY + E+ +++ A E++ + ++ + Y Q + LDCL
Sbjct: 495 VNAERYITEELKEYEEKILGAEEKILSLEARLFNELVLCLSEYIPPIQMNANLIGRLDCL 554
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYC 794
+ A ++ + ++RP D ++ I I +GRHPV++ L + ++ ND L E++
Sbjct: 555 LSFAKVAESNRYIRP---DVNDSQVIDIKAGRHPVIEKQLPIGEPYIANDVYLDDEKQQI 611
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS +RQ ALI +MAQ+G FVPA A + ++D I+TR+GASD+I G ST
Sbjct: 612 IIITGPNMAGKSALLRQTALITLMAQIGCFVPAECARIGIVDKIFTRVGASDNISVGEST 671
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFVT 912
F+ E+NEAS IL N +++SLV+ DELGRGTST+DG++IA+A ++Y+ EH + LF T
Sbjct: 672 FMVEMNEASDILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNARAKTLFAT 731
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ +++ F + Y+VS + + V +L K+VPG SE SFG V
Sbjct: 732 HYHELNEMEASFK-RIKNYNVSV-----------KEVNNKVIFLRKLVPGGSEHSFGIHV 779
Query: 973 AQLAQLPPSCISRATVIAAKLEAE 996
A++A +P S + R+ I +LE E
Sbjct: 780 AKMAGMPKSIVKRSNEILKQLETE 803
>gi|298676066|ref|YP_003727816.1| DNA mismatch repair protein MutS [Methanohalobium evestigatum
Z-7303]
gi|298289054|gb|ADI75020.1| DNA mismatch repair protein MutS [Methanohalobium evestigatum
Z-7303]
Length = 887
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 255/950 (26%), Positives = 419/950 (44%), Gaps = 176/950 (18%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAHLDHNFM----- 141
K TP QQ E+K KY D LL +G + F EDA+ ++ L I + + N
Sbjct: 3 KQTPAMQQYYEMKKKYSDALLFFRMGDFYECFDEDAKTVSEELEITLTNRNGNKKGEKRP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTE----------TAAIKAHGPGKAGPFGRGLS 191
A IP ++ ++ RL+ G+KV + +Q E ++ PG A S
Sbjct: 63 LAGIPYHAVDNYLPRLIKKGYKVAICEQLEDPREAKGVVKRGVVRVVTPGTAID-----S 117
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
++T A +NYL+ + + +N FG F ++
Sbjct: 118 TMFTDAA-----------------NNYLMAISE--------KNNEFGLSF--------LD 144
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
+STG+ + + +D + + + + PAE +L L +E +A + +
Sbjct: 145 VSTGEFLTTQLSDEPPYDRIASEIARMRPAECILPPYLYNNSE---IAQLLKDMKITLHE 201
Query: 312 ASRDCFIGGGALAEVM-----SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
F A +++ S + MG D L+
Sbjct: 202 YDSSAFETNTARLQLLQHFNVSTLKGMGCDDLT--------------------------- 234
Query: 367 LAVQALALTIRHLKQFGLERIMC-LGA--SFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
LA+ A T+ Q+ LE M LG + +S S S M L + TL+ LEV+++
Sbjct: 235 LAISASGATL----QYTLETQMRELGHVHTLKSYSDSDFMVLDSITLRNLEVIKSVRGEG 290
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
T+L +++ T T G RLL++W+ PL + I+ RLDAV + E
Sbjct: 291 NDATILKVLDDTKTPMGGRLLQKWLVKPLISIDKINRRLDAVQNLKEE------------ 338
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA----- 538
T+V LS V D++R I RI + + + +A+ ++
Sbjct: 339 --------TLVRFDLRSYLSYV-------KDVERLIGRIVYGNSNARDLVALKKSLEVVP 383
Query: 539 -ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNK 594
I+ K+ Q I E +++S T + LI +T PA + +
Sbjct: 384 DIIGCLKECDQSDILKEIHNELSSFT-ELGDITELIEKGITDEPPATVREGG-------- 434
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVS 652
+I G E+ + + +KE + S R++ G+ +L+ + V
Sbjct: 435 ------------LIKPGYSEELDELKDMSRHSKEWIASFQKQERERTGINSLKVGYNKVF 482
Query: 653 GITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
G + P VP ++ + + R+++PE+ + + A+E++ + +
Sbjct: 483 GYYIEVTKPNIKYVPDDYIRKQTMANAERFYTPELKERENMIISADEKIVSLEYNLFTDI 542
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVL 772
+ + Q + LD L LA ++ N N+VRP DD I I GRHPV+
Sbjct: 543 NSKVASHSKNLQRTATLIGKLDVLANLAEIAVNNNYVRPEVTDD---CDITIREGRHPVV 599
Query: 773 DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
+ + FV ND ++ +ITGPNM GKS Y+RQ +LI IMAQ GSFVPAS A +
Sbjct: 600 ENKVDSGFVANDCEMNCTDNQFLLITGPNMAGKSTYMRQNSLITIMAQAGSFVPASYASI 659
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
++D ++TR+GA D + G+STF+ E+ E + IL N T +SLV++DE+GRGTST DG +I
Sbjct: 660 GIVDRVFTRVGAFDDLASGQSTFMVEMVELANILNNATPKSLVLLDEIGRGTSTFDGYSI 719
Query: 893 AYATLDYLLEHKKCMV----LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
A A ++Y+ HKK V LF THY ++ D++ K V YH++ +
Sbjct: 720 AKAVVEYI--HKKDGVGVRSLFATHYHQLTDLENKLK-RVSNYHIAV-----------KE 765
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
++ +L K+VPG ++ S+G +VA+ A +P SRA I +E S
Sbjct: 766 EGDNLVFLRKIVPGATDKSYGIQVARYAGVPKKVTSRAREILKDIEKNAS 815
>gi|227872342|ref|ZP_03990695.1| DNA mismatch repair protein MutS [Oribacterium sinus F0268]
gi|227841806|gb|EEJ52083.1| DNA mismatch repair protein MutS [Oribacterium sinus F0268]
Length = 881
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 253/931 (27%), Positives = 427/931 (45%), Gaps = 158/931 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K +P+ +Q +E K + PD LL +G + F EDA A+K L G L+
Sbjct: 5 KLSPMMRQYLESKKEVPDALLFYRIGDFYEMFFEDAIKASKALDLVLTGKDCGLEERAPM 64
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
IP + +V +LV+ GFKV + +Q E + G R + + T T
Sbjct: 65 CGIPYHAADSYVSKLVSQGFKVAIGEQVEDPKLAK------GLVKREIIRVITPGT--QT 116
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
E+ E G++NYL + GN G +G+ V+ISTG++
Sbjct: 117 EETALEE----GKNNYLSAIYP--GNSG--------------IGLATVDISTGELYS--- 153
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
LS+S ++ LL + +S+ + K +L G + + A F
Sbjct: 154 -------------LSVSDSKELLDE-ISRFSPKEILCPIGFLEDKELSSALDSRFSLSIT 199
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG------IMNMPDLAVQALALTI 376
E + + LS++ + +P G + +E + + D L+ I
Sbjct: 200 EKEKEYFGKEEADKILSSHFSSS--IPGLGLEHAPLERRALGACLRYLYDTQKNILS-HI 256
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
RH+++F E M L S + L+ E LR+ G+LL +++ T
Sbjct: 257 RHIERFHREDYMLLDLS------------TQRNLELWETLRDKKK---RGSLLWVLDKTH 301
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T GSR+LR ++ PL +R + RLD + E+ + Y E + ++
Sbjct: 302 TAMGSRMLRHFLERPLRERKKMEERLDCIEELCQR---YIDGEELREY------------ 346
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY-----------AGKQ 545
L S+ D++R I +I +A + +A+ ++ + +GK
Sbjct: 347 -----LDSIY-------DMERLIGKISISSANARDMLALKSSLQFLPVIKRTLSSFSGKL 394
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
LQ L + E++ ++ + P I +
Sbjct: 395 LQDLGQKMDALEEIYTRIDEC-------IEEDPPLSIKEGG------------------- 428
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK 665
II + EV R+A + KE L+ L R++ G++NL+ + E+ +++
Sbjct: 429 -IIKSSFHEEVRLFREAGEHGKEWLNRLEEQEREKSGIKNLKIKYNRIFGYCFEISKSYQ 487
Query: 666 --VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+P + + + + RY + E+ +++ A E L + + + + +E
Sbjct: 488 GEIPDYFIRRQTLAQAERYTTVELQDLQNKILGAAENLQQLEYSLFVNLREELSRELGRM 547
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVP 782
Q + +A LD +L+ ++ + +VRP +E + I GRHPV++ +L D +FVP
Sbjct: 548 QKTAKEIAFLDACLSLSKVAMQEQYVRPKI---NEKGNLTIVDGRHPVVEKLLQDQSFVP 604
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND +L E E IITGPNM GKS Y+RQVALI +MA +GSFVPA A++ + D I+TR+
Sbjct: 605 NDASLGKE-EKIAIITGPNMAGKSTYMRQVALIVLMASIGSFVPAKQADIPICDRIFTRV 663
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD + G+STF+ E++E S ILRN T SL+I+DE+GRGTST DG++IA+A ++YL
Sbjct: 664 GASDDLASGQSTFMVEMSEVSNILRNATENSLLILDEIGRGTSTFDGLSIAWAVVEYLAR 723
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
K LF THY +++ ++ K +V Y ++ SK ++ +L K++PG
Sbjct: 724 EIKAKTLFATHYHELSVLEGKLE-NVKNYCIAV-----------SKEQGEIQFLRKIMPG 771
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
++ S+G VA+LA +P + RA I++ L
Sbjct: 772 GADESYGIDVAKLAGVPAPVLDRAREISSFL 802
>gi|90580347|ref|ZP_01236154.1| DNA mismatch repair protein [Photobacterium angustum S14]
gi|90438649|gb|EAS63833.1| DNA mismatch repair protein [Vibrio angustum S14]
Length = 859
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 247/936 (26%), Positives = 425/936 (45%), Gaps = 170/936 (18%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K+TP+ QQ + +K + PD+LL +G + F +DA+ A+++L I +
Sbjct: 7 EKHTPMMQQFLRIKAENPDILLFYRMGDFYEMFFDDAKRASQLLDISLTKRGSTNGEPIP 66
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A +P + ++ +LV G V + +Q A GP R + + T T
Sbjct: 67 MAGVPYHAVEGYLAKLVQQGVSVAICEQIGDPAT------SKGPVERKVVRIVTPGT--- 117
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDV--RLGVVAVEISTGDVVY 259
V D+ + + R+ + + + G ++I++G +
Sbjct: 118 ---------------------VSDEALLNERRDNLIAAIYTANNKFGYATLDITSGRFML 156
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELL---------LGQPLSKQTEKMLLAYAGPAS--NVR 308
E N ++A L SPAELL L +P + + + + + +
Sbjct: 157 TEPNS---EEEMQAELQRTSPAELLYPEDFTYLHLVEPFKGKRRRPIWEFELDTARQQLT 213
Query: 309 VECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA 368
++ +RD IG G + L G + Q +P H AI ++ D A
Sbjct: 214 LQFGTRD-LIGFGVENAELGL-SAAGCLMQYVKDTQRTALP----HIRAI--TLDTKDHA 265
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
V A T R+L+ ++L+G + TL+A
Sbjct: 266 VILDAATRRNLEL------------TQNLAGGYDNTLAA--------------------- 292
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
+++ T T GSRLL+RW+ P+ D+ ++ RLDA+ KN
Sbjct: 293 --VLDQTATPMGSRLLKRWLHQPIRDQKQLNGRLDAIEAF------------------KN 332
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
S + + +S VL +G D++R + R+ R+A P + + A+ Y + +
Sbjct: 333 SGM-------FVDVSGVLRHMG---DLERILARLALRSARPRDLARMRTAMQYLPELAEL 382
Query: 549 LHIDGEYREKVTSKTLHSALLKRLI------LTASSPAVIGKAAKLLSTVNKEAADQGDL 602
L + R + H+A + L + + P +I L N E + DL
Sbjct: 383 LAEIPQTR--INDLATHAAPMDELCELLEHAIIENPPVIIRDGGVLAPGYNAELDEWRDL 440
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVS-GITHLIE 659
++G ++ +A + + ++DSL ++G + F+ VS G +HL
Sbjct: 441 ------ADGA-TKFLEELEASERERHDIDSL------KVGFNQVHGFFIQVSRGQSHL-- 485
Query: 660 LPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
VP ++ + + K RY PE+ D++ + + + + W+ + +
Sbjct: 486 ------VPSHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALALEKKLWEELFDKLLPH 539
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
+ Q A AL+ LD L LA + + N+ RP + + I I +GRHPV++ +L +
Sbjct: 540 LEQLQNAASALSELDVLTNLAERADSLNYCRPELMTE---TGIEITAGRHPVVEHVLSEP 596
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
F+ N +LH +R IITGPNMGGKS Y+RQ ALI +MA VGSFVPA + ++ LD I+
Sbjct: 597 FIANPISLHQDRRML-IITGPNMGGKSTYMRQTALIALMAHVGSFVPAEAVKIGPLDRIF 655
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR+GASD + GRSTF+ E+ E + IL N T QSLV++DE+GRGTST+DG+++A+A+ ++
Sbjct: 656 TRIGASDDLASGRSTFMVEMTETANILHNATKQSLVLMDEIGRGTSTYDGLSLAWASAEW 715
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
L + M LF THY ++ ++ + TG + H+ + + ++ +++ V
Sbjct: 716 LADKISAMTLFATHYFELTELPSLLTG-LANVHLDAV-----------EHGDEIAFMHAV 763
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
G + S+G VA LA +P + I RA + +LEA
Sbjct: 764 QEGAASKSYGLAVASLAGVPKAVIKRAKIKLQQLEA 799
>gi|375110985|ref|ZP_09757199.1| DNA mismatch repair protein MutS [Alishewanella jeotgali KCTC
22429]
gi|374569017|gb|EHR40186.1| DNA mismatch repair protein MutS [Alishewanella jeotgali KCTC
22429]
Length = 853
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 261/931 (28%), Positives = 417/931 (44%), Gaps = 147/931 (15%)
Query: 79 PSSQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--- 133
PS Q +TP+ QQ + LK+++P +LL +G + F EDA+ AA +L I
Sbjct: 2 PSDQKPEQALSNHTPMMQQYLALKSQHPQILLFYRMGDFYELFYEDAKKAAALLDISLTK 61
Query: 134 --AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS 191
A +P + ++ RLV G V + +Q A GP R +
Sbjct: 62 RGQSAGEPIPMAGVPYHAVEGYLARLVQLGESVAICEQIGDPATSK------GPVERKVV 115
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
+ T T+ + +D L+C + + + G+ ++
Sbjct: 116 RIVTPGTVTDEALLNERQDN-------LLCAISESRS---------------HFGLAQLD 153
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
+++G + + + L A+L L+PAELL + ++ P R
Sbjct: 154 LTSGRFLLNQVSHA---DDLAALLQRLNPAELLYPE-----------NFSLPHLTERKGA 199
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
R + A AE + L + G L Q+ V E A +M +A
Sbjct: 200 RRRPVWEFELASAERL-LCQQFGTRDL-----QSFGVLEAPVALMAAGCLMQYVKDTQRA 253
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+ HL+ LER F + L A T + LE L + NG TL +
Sbjct: 254 ---QLPHLRSIALER----PDDF--------IVLDAATRRNLE-LTHTLNGQTEHTLAAV 297
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T T GSRLL+RW+ PL +R ++ RLDAV E+ E D
Sbjct: 298 LDKTQTAMGSRLLKRWIHAPLRNRTQLNQRLDAVQELTE-------------------DF 338
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-H 550
++P SL + DI+R + R+ R+A P +F + QA+ + QQL H
Sbjct: 339 QALQP-----------SLKQIGDIERILARLALRSARPRDFARLRQALTELPELQQQLLH 387
Query: 551 IDGEYREKVTSKTLH----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
+ ++ TL + LL+R I+ SP V+ + D G
Sbjct: 388 AKSQLLQQHQQATLPVPELAELLQRAIV--ESPPVLIR-------------DGG------ 426
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF 664
+I+ G +E+ R + A + L L R++ G+ +L+ F + G A+
Sbjct: 427 VIAPGYDAELDEWRALAEGATDYLQQLELRERERTGISSLKVGFNKIHGFYIETGRSADT 486
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
+VP + + + K RY PE+ D++ + + + + +D+ Y A+ Q
Sbjct: 487 RVPPEYVRRQTLKNNERYIIPELKEYEDKVLGSQSKALALEKQLYDALFDAVSPYLAQLQ 546
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
QAL+ LD L + A + + RP+ E + I + RHPV++ +L F+ N
Sbjct: 547 QLAQALSELDVLCSFAECAVLYQYCRPLLT---EQIGIQLTQARHPVVERVLKAPFIANP 603
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
L A R +ITGPNMGGKS Y+RQ ALI +MA +GSFVPA A + +D I+TR+GA
Sbjct: 604 LQLDASRRML-MITGPNMGGKSTYMRQTALIALMAAIGSFVPAEQAVIGPIDRIFTRIGA 662
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
SD + GRSTF+ E+ E + IL + TAQSLV++DE+GRGTST+DG+++A+A +DYL
Sbjct: 663 SDDLASGRSTFMVEMTETATILHHATAQSLVLMDEIGRGTSTYDGLSLAWACVDYLANQL 722
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGV 963
+ + LF THY ++ + + +V H +D+ D + +++ V G
Sbjct: 723 QALTLFATHYFELTSLAQQLP-AVANVH------------LDAVEHGDGIVFMHHVQEGA 769
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ SFG +VAQLA +P I A +LE
Sbjct: 770 ASKSFGLQVAQLAGVPRPVIQLARQKLRQLE 800
>gi|332283429|ref|YP_004415340.1| DNA mismatch repair protein mu [Pusillimonas sp. T7-7]
gi|330427382|gb|AEC18716.1| DNA mismatch repair protein mu [Pusillimonas sp. T7-7]
Length = 873
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 253/925 (27%), Positives = 412/925 (44%), Gaps = 138/925 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
+TP+ QQ + LK + LL +G + F EDAE A++L + A IP
Sbjct: 9 HTPMMQQYLRLKAEAGSHLLFYRMGDFYEMFYEDAERGARLLNLTLTKRGTSNGAPIPMA 68
Query: 149 RLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+ H + RLV G + + +Q A GP R + + T TL
Sbjct: 69 GVPFHAMEGYLARLVALGESIAICEQIGDPA------ASKGPVERKIMRIVTPGTLTDEA 122
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D + V N + R G+ + +++G+ E
Sbjct: 123 LLPAKAD------RMIAAVYTTRANRSE------------RSGLAWMNLASGEFRVTECT 164
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + L V PAELL + L + A P + + A RD
Sbjct: 165 PEMLETELHRV----EPAELLCAESLRMSGNNGIALTALPDWHFESDGA-RDV------- 212
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
L+ + DTL+ G++++P A AL +R++ +
Sbjct: 213 -----LHRHFAVDTLAGF------------------GLVDLPVATCAAGAL-LRYVSRTQ 248
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
+ + + + R + L T + LE L +G TL ++H T GSRL
Sbjct: 249 TQSLSHI-QTIRVDQAGEYVVLDPVTRKNLE-LTETISGESSPTLFSTLDHCQTPMGSRL 306
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LRRW+ HPL D R ++ S G D N++ L
Sbjct: 307 LRRWLHHPLRDNAPAQGRQQVIATF--------LSAPPGD-DALNAEAP---------LD 348
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--------HIDGEY 555
++ L R PD++R TRI R+ P E ++ +A+ Q L +D E+
Sbjct: 349 TLRQMLDRYPDLERIATRIALRSVRPRELASLREALALLPDVAQHLLRAFVRQPALD-EF 407
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+ ++ + + LL+R I PA++ + +I+ G SE
Sbjct: 408 IQNISIDSEIAQLLQRAI--DPEPALLIREGG-------------------VIATGYDSE 446
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R+ + E L L R++ G+ L E+ V G + KVP + +
Sbjct: 447 LDELRRLASDSGEFLVELEARERERTGIPTLRVEYNRVHGFYIEVSRGQADKVPAEYRRR 506
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW--DSFLKEFGGYYAEFQAAVQALA 731
+ K RY +PE+ T D++ A + + R W +S L++ GY + LA
Sbjct: 507 QTLKNAERYITPELKTWEDKVLSAKDR--SLSREKWLFESLLEQLAGYASALSQCAATLA 564
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAER 791
+D L ALA ++ ++ P ++ +E I I +GRHPV++ + + F PND L +R
Sbjct: 565 QIDALAALAEHAQANDWTAPELLEGNE---IFIEAGRHPVVEHSI-ERFTPNDCELGPQR 620
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
+ITGPNMGGKS Y+RQ+ALI ++A++GSFVPA SA + +D I+TR+GA+D + G
Sbjct: 621 RML-LITGPNMGGKSTYMRQIALIALLARIGSFVPARSARIGRIDRIFTRIGAADDLAGG 679
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFV 911
RSTF+ E+ EA+ IL T QSLV++DE+GRGTST+DG+A+A++ LL H + + LF
Sbjct: 680 RSTFMMEMTEAASILSASTPQSLVLMDEIGRGTSTYDGLALAWSIAHRLLTHNQALTLFA 739
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY +I + T+ G+ + + ++S + +L++V G + S+G +
Sbjct: 740 THYFEITRLPTEAPGAANVHLAA------------AESSSGIVFLHEVQSGPASRSYGIQ 787
Query: 972 VAQLAQLPPSCISRATVIAAKLEAE 996
VAQ A +P + I A+ ++LEA+
Sbjct: 788 VAQRAGIPAAVIRHASRELSRLEAQ 812
>gi|149200634|ref|ZP_01877637.1| DNA mismatch repair protein [Lentisphaera araneosa HTCC2155]
gi|149136283|gb|EDM24733.1| DNA mismatch repair protein [Lentisphaera araneosa HTCC2155]
Length = 837
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 247/930 (26%), Positives = 421/930 (45%), Gaps = 144/930 (15%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPD-VLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
S + N K TP+ +Q ++ K D +L+ +G + F EDAE A+++GI +
Sbjct: 2 SKASAQNVKLTPMMRQYLDAKEGLTDDTILLFRLGDFYEIFFEDAERGAEIMGITLTRRN 61
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
+ A +P L+ ++ R++ G KV + +Q E A G R ++ + T T
Sbjct: 62 SIPMAGVPYHALDNYLPRILEHGLKVAIAEQMEDPATTK------GIVRRAVTRVITPGT 115
Query: 199 LEAAEDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
+ ED ++N+L + ++GK + G+ +++STG+
Sbjct: 116 IT--------EDNVLRSSKANFLASL-----HIGKKKTGL-----------AFLDLSTGN 151
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDC 316
E +D LEA L +P+EL++ + + + + + S + D
Sbjct: 152 FRILEHSDPH---NLEAELHRANPSELIIADEI--EIDSLPFSLPDSTSISPIPSWQFDS 206
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
+ L + S+ G + N+ AI + D + L +
Sbjct: 207 DLTEQVLLKHFSVTTLEGFGCRNQND--------------AITAAGALLDYVLTNLKRSA 252
Query: 377 RHLKQFGL-ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
H+ GL + C+ +S TL+ +E + +S S TL+ +++
Sbjct: 253 DHITSLGLIQNTDCMIVD----------RVSQRTLELVEPIFRDSKNS---TLISVLDEC 299
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T GSRLLR W+ PL + I+ R D +S SD ++E
Sbjct: 300 STPMGSRLLREWLLRPLTNIEAITQRQDTLSSFC-------------------SDQMLLE 340
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----H 550
+ S DI+R +TR+ TA E +Q I +A K + + +
Sbjct: 341 --------ELRESFRTVRDIERILTRLNLGTANARE----LQTIAWALKAIPDIESIISY 388
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASS---PAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+D + + S+ + L +L A + PA + D G I
Sbjct: 389 VDSDLLSDIKSRLFNFPELTDTLLQALTDEPPATL--------------KDGG------I 428
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA--NFK 665
IS+G ++ RK + K L +++ G++ L+ + IEL + +
Sbjct: 429 ISDGYNDQLDHFRKGSREGKAWLARFEAQEKERTGIKKLKIGYNRVFGYYIELSKINSAQ 488
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
P ++ + + RY +PE+ D + A E+ + + + E Q+
Sbjct: 489 APEDYIRKQTLANAERYITPELKEIEDSVLGAEEKAKALEYELFQELRLKVTEKTKEIQS 548
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPND 784
ALA LDCL LA ++ ++++RP ++ +I+I GRHPV++ + FVPND
Sbjct: 549 TAIALAELDCLANLAYVALKRSYIRPQLCEEK---KINISDGRHPVVEAAMDAGIFVPND 605
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T+++ + ++TGPNM GKS YIRQVAL+ IMAQ+GSF+P S AE+ + D IYTR+GA
Sbjct: 606 TDMNDHQASINLVTGPNMAGKSTYIRQVALLTIMAQMGSFIPCSKAEIGITDSIYTRIGA 665
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D + +G+STF+ E+ E + IL N +SLVI+DE+GRGTST+DG+++A+A ++ L
Sbjct: 666 ADDLSRGQSTFMVEMVETANILNNAGPRSLVILDEIGRGTSTYDGLSLAWAIAEH-LHDA 724
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
C+ LF THY ++ TK S+ + H+ G + +L+K+ G +
Sbjct: 725 GCLTLFATHYHEL----TKLGASLPKVKNWCVAVHESKGK--------IIFLHKIQAGAA 772
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ S+G VA+LA +P S I RA I LE
Sbjct: 773 DRSYGIYVAKLAGIPKSVIKRADNILQDLE 802
>gi|346314847|ref|ZP_08856364.1| DNA mismatch repair protein MutS [Erysipelotrichaceae bacterium
2_2_44A]
gi|345905785|gb|EGX75522.1| DNA mismatch repair protein MutS [Erysipelotrichaceae bacterium
2_2_44A]
Length = 843
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 235/923 (25%), Positives = 408/923 (44%), Gaps = 143/923 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDH 138
T YTP+ + +ELK ++ D ++ +G + F EDA+ A+ L G A ++
Sbjct: 2 TKKATYTPMMKHYLELKEQHEDAIIFYRLGDFYEMFFEDAKTASSELDLVLTGRNAGVEE 61
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
IP +++RL+ G+KV +V+Q E A+ G R + + T T
Sbjct: 62 RVPMCGIPHHAAKGYIQRLIQKGYKVAIVEQLEDPALAK------GLVKRDVIKIVTPGT 115
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ D E + + + + FG L V+ E++TG++
Sbjct: 116 IM---------DEVSDEKTTVY--------IASLHDFKFG------LAVILCEMTTGELR 152
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ + ++ VLL + E+++ + K+ KM+
Sbjct: 153 AQLIDKHVM--AIQKVLLGNNVREIVIQEKFDKKIVKMI--------------------- 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
E M T+S + D + + +R + GI + D A + +
Sbjct: 190 ------------EEMQTITVSYHNDNAL----KEEYRHLLNGIED--DRVETAFGVLTNY 231
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L + + L A + + +T Q LE+ + + S TL ++ +
Sbjct: 232 LDETQKRNMAHLNAVEMVYENDF-LQMDFSTKQNLELTSSLRSNSRSQTLWSFLDKCRSS 290
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
GSRLL++W+ +PL D +I+ RL+AV + ++ + T + + +H
Sbjct: 291 MGSRLLKKWIEYPLVDTAMINRRLNAVEYLNDN---FITKDELREH-------------- 333
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
LG D++R R+ + +A P + + +++ + + + + H Y E
Sbjct: 334 ----------LGFVYDMERLSARVAYGSANPRDILRLIKTLEHTPQIFELFHDCSAYEE- 382
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
S R + A+I L D G + G E+ +
Sbjct: 383 -----FQSIDPCRELYDMIEGAIIDNPPLTLK-------DGG------VFVEGYNEELDQ 424
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA----NFKVPLNWAKVN 674
R+ ++ K + L N R++ G+++L+ + IE+ + K + +
Sbjct: 425 VREIGKNGKNWILELENKERERTGVKSLKIGYNRVFGYYIEVTKTNLDSIKDEFGYVRKQ 484
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ R+ + E+ D + A E + ++ L + Y + ALA +D
Sbjct: 485 TLTNAERFITQELKDKEDAIVHAQERSIRLEAELFNHLLNQIKVYLPKLHDLSHALATID 544
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREY 793
L+ALA +S + RP F H IH+ RHP+LD ++ +V ND + + +
Sbjct: 545 ALYALAEISSENGYTRPQF---HTGHSIHMKEARHPILDRMMKTTRYVSNDLEMGEDNDI 601
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS Y+RQ L+ IMAQ+G FVPA AE+ + D I+TR+GASD I G+S
Sbjct: 602 L-MITGPNMGGKSTYMRQTVLLVIMAQIGCFVPAKKAEMPIFDQIFTRIGASDDIMSGQS 660
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ L+N TA SL++ DE+GRGTST+DG+A+A A ++Y++ + K LF TH
Sbjct: 661 TFMVEMIEANNALQNATANSLILFDEIGRGTSTYDGMALAQAMIEYIMRNIKAKTLFSTH 720
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ ++ K G + HV + D VT+LY+V+ G ++ S+G VA
Sbjct: 721 YHELTEMAEKNAG-IRNVHVDV-----------HEEDDKVTFLYRVLDGKADKSYGINVA 768
Query: 974 QLAQLPPSCISRATVIAAKLEAE 996
+LA LP S + RA I LE +
Sbjct: 769 RLAHLPSSVLERAKQILDNLELQ 791
>gi|312793677|ref|YP_004026600.1| DNA mismatch repair protein muts [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180817|gb|ADQ40987.1| DNA mismatch repair protein MutS [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 863
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 244/948 (25%), Positives = 430/948 (45%), Gaps = 157/948 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +E+K K D +L +G + F EDA +A+K L I +
Sbjct: 5 TPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIALTSRDCGNNEKAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +L+ G+KV + +Q E + G R ++ + T T
Sbjct: 65 VPYHSATSYIAKLIEKGYKVAICEQVEDPKLAK------GIVKREITRIITPGTF----- 113
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
++ +N++ C+ D + V++STG E
Sbjct: 114 ---IDENISTANNFICCISKDRSE----------------FALTFVDVSTG-----EMYS 149
Query: 265 GFLRSGLEAVLLSL---SPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L L+ +L + +P+E+L+ + +E L + ++ C S F+
Sbjct: 150 CLLEEDLQKLLNEIGKYNPSEILISR-----SEDELYEF------LKKNCTS---FVQMI 195
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++ YE + D+ + I + N+ ++ ++ ++++
Sbjct: 196 EFVDLQKCYEVIENQINVGKIDERL-----------ILSVGNLLKYLIETQKISFDYIRR 244
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ R+ + + NT + LE+ + S +LL I++ T T GS
Sbjct: 245 YEFYRVQNY------------LQIDINTKRNLELTESIIQRSRKNSLLGILDQTKTSMGS 292
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL D I+ RLD+V ++ + Y I
Sbjct: 293 RLLKKWIERPLIDVIEINRRLDSVEQLKSN---------------------------YSI 325
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDGEYREKV 559
L + L R DI+R ++ ++ + +++ ++I L A K+L
Sbjct: 326 LVQIEELLSRMYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLS----------- 374
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA---ADQGDLLNLMIISNGQFSEV 616
+ + LLK + + I A + S++N++A +G II +G EV
Sbjct: 375 ---SFSAQLLKEIYEGLDTLEDI--YALIDSSINEDAPVTLKEGG-----IIKDGFNEEV 424
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVN 674
R R +++KE L R G++NL + IE+ +N+ VP + +
Sbjct: 425 DRLRNISKNSKELLVQYEEKERNLTGIKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQ 484
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ D++ A+++L + + Q +A LD
Sbjct: 485 TLANAERYITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASYIAILD 544
Query: 735 CLHALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAERE 792
L + A ++ + +VRP V + D +I+ +GRHPV++ ++ NF+PNDT L
Sbjct: 545 VLCSFARIAIDNEYVRPNVCLGD----RIYFKNGRHPVVEKMIGRGNFIPNDTELDQAEN 600
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS Y+RQVALI IMAQ+G FVPA A + ++D I++R+GASD I G+
Sbjct: 601 RVLIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQ 660
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLF 910
STF+ E++E + IL+N T +SL+I DE+GRGTST+DG++IA+A L+Y+ + K LF
Sbjct: 661 STFMVEMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLF 720
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFG 969
THY ++ +++ + G V Y V D K + +++ +L K+V G +SS+G
Sbjct: 721 ATHYHELTELEERIPG-VKNYRV------------DVKEEGKNIIFLRKIVRGGCDSSYG 767
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
VA+LA +P + RA I +LE +R R ++++ + ++Q
Sbjct: 768 IHVARLAGIPEEVLKRAEEILKQLEEADINRKNIRKLRKEIKKEFTEQ 815
>gi|288925895|ref|ZP_06419825.1| DNA mismatch repair protein MutS [Prevotella buccae D17]
gi|288337319|gb|EFC75675.1| DNA mismatch repair protein MutS [Prevotella buccae D17]
Length = 889
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 268/939 (28%), Positives = 432/939 (46%), Gaps = 144/939 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT- 142
+ K TP+ +Q ++K+K+P+ LL+ G + + EDA AA+VLGI +N +
Sbjct: 3 VNEKGLTPMMRQFFDMKSKHPEALLLFRCGDFYETYCEDAVEAARVLGITLTRRNNGGST 62
Query: 143 -----ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGL 190
A P L+ ++ +L+ AG +V + Q E K GK G RG+
Sbjct: 63 AVTEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREQIKGKKGLSEMDKMVKRGI 122
Query: 191 SALYTKATLEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
+ L T V G++ E+N+L V FG G GV
Sbjct: 123 TELVTPG-------VAMGDNVLNYKENNFLAAV-------------HFGKG---ACGVSF 159
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRV 309
++ISTG+ + GE + +E +L + P E+L + + E+ Y G R
Sbjct: 160 LDISTGEFLTGEGTYDY----VEKLLGNFQPKEVLYDRARKQDFER----YFG----TRF 207
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
D ++ A L ++ G +L + V N A IM +L
Sbjct: 208 CTFELDDWVFTDQSAR-QKLLKHFGTKSL-----KGFGVDHLKNGVIASGAIMQYLELTQ 261
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
I L + ++ + L F S S + + + L L+V+
Sbjct: 262 HTHIGHITALARIEEDKFVRLD-KFTSRSLELLQPMQEDGLSLLDVI------------- 307
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+ T+T GSRLLRRW+ PL D I+ RLD V
Sbjct: 308 ---DRTVTPMGSRLLRRWMVFPLKDVRPINERLDIV------------------------ 340
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
D +P F + +G D++R I+++ +P E + + A L A + +
Sbjct: 341 DYFFKKPDFRVCVDEEFHRMG---DLERIISKVAVGRVSPREVVQLKNA-LTAIRPV--- 393
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA-DQGDLLNLM-I 607
K+ + + LKR+ + L ++KE D LLN +
Sbjct: 394 --------KMACLSAGNEALKRV------GEQLSLCESLRDRIDKEIQPDPPQLLNKGDV 439
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF- 664
I++ E+ R + K+ L + ++ G+ +L+ F +V G + +E+ F
Sbjct: 440 IADNYSPELDELRSISRHGKDYLLEIQQREIEKTGITSLKVGFNNVFG--YYLEVRNTFK 497
Query: 665 -KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
KVP W + + + RY + E+ +++ A+E++ ++ ++ + + +
Sbjct: 498 DKVPEEWVRKQTLAQAERYITQELKEYEEKILGADEKIIMLETKLFNELILAMQEFIPQI 557
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFV 781
Q +A LDCL + A S +VRP +D+ E + I GRH V++T L + +V
Sbjct: 558 QIDANLVAHLDCLLSFAKTSEEHRYVRPT-IDESEVLDIK--QGRHAVIETQLPIGEQYV 614
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND L ++ +ITGPNM GKS +RQ ALI ++AQVG FVPA SA + ++D I+TR
Sbjct: 615 PNDVYLDTVKQQVMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAESARIGLVDKIFTR 674
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD+I G STF+ E+ EAS IL N + +SLV+ DELGRGTST+DG++IA+A ++YL
Sbjct: 675 VGASDNISLGESTFMVEMTEASNILNNVSGRSLVLFDELGRGTSTYDGISIAWAIVEYLH 734
Query: 902 EHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
EH K LF THY ++ +++ F + Y+VS + ++ K V +L K+
Sbjct: 735 EHPKARARTLFATHYHELNEMEKNFP-RIKNYNVS-------VKELNGK----VIFLRKL 782
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
G SE SFG VA++A +P S + RA VI +LEA+ S
Sbjct: 783 ERGGSEHSFGIHVAEIAGMPRSIVKRANVILKQLEADNS 821
>gi|218258632|ref|ZP_03474960.1| hypothetical protein PRABACTJOHN_00615 [Parabacteroides johnsonii
DSM 18315]
gi|218225307|gb|EEC97957.1| hypothetical protein PRABACTJOHN_00615 [Parabacteroides johnsonii
DSM 18315]
Length = 895
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 261/932 (28%), Positives = 441/932 (47%), Gaps = 160/932 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA A++LGI N A
Sbjct: 23 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVTGAEILGIVQTKKANGPGQTIEMAG 82
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 83 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 135
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + + GK DV G+ ++ISTG+ + E +
Sbjct: 136 ILNHK-----ENNFLAAI-----HFGK----------DV-CGIAFLDISTGEFLTAEGSI 174
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP FI L
Sbjct: 175 DYV----DKLLNNFSPKEVLVERGSRKRFEEAF----GPR-----------FFIF--ELD 213
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ + E + L + E +N+ +G G+ ++ L + A + +L Q
Sbjct: 214 DWVFTSEAANDRLLKHFETKNL----KGF------GVQHLK-LGIVASGAILYYLDQTQH 262
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT-LLHIMNHTLTIYGSRL 443
I + S + + L T++ LE++ S +E GT LL +++ T++ GSR+
Sbjct: 263 THISHI-TSLSRIEEDRYVRLDKFTVRSLELV---STMNEEGTSLLDVLDKTVSPMGSRM 318
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
LRRW+ PL D I R D V E +H P+ +L
Sbjct: 319 LRRWILFPLKDVKPIHERQDVV-------------EYFFRH-----------PEVKELLE 354
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
L +G D++R I+++ +P E + + KV +
Sbjct: 355 EKLEQIG---DLERIISKVAVGRVSPREVVQL----------------------KVALRA 389
Query: 564 LHSALLKRLILTASSPAV--IGK----AAKLLSTVNKEA-ADQGDLLNL-MIISNGQFSE 615
+ +K + + P++ IG+ A + + KE D LLN +I+ G +E
Sbjct: 390 IEP--IKEACMASDEPSLCRIGEQLNACALIRDRIEKEINNDPPSLLNRGGVIATGVNAE 447
Query: 616 VARARKAVQSAKEELDSLINMCRKQL---GMRNLE--FMSVSGITHLIELPANF--KVPL 668
+ R S K D L+ + +++ G+ +L+ F +V G + IE+ + KVP
Sbjct: 448 LDELRAIAYSGK---DYLLKVQAREIELTGISSLKIGFNNVFG--YYIEVRNAYKDKVPA 502
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
W + + RY + E+ +++ A E++ + ++ + Y Q
Sbjct: 503 EWIRKQTLVNAERYITEELKEYEEKILGAEEKILSLEARLFNELVLCLSEYIPPIQMNAN 562
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTN 786
+ LDCL + A ++ ++RP D ++ I I +GRHPV++ L + ++ ND
Sbjct: 563 LIGRLDCLLSFAKVAEINCYIRP---DVNDSQVIDIKAGRHPVIEKQLPIGEPYIANDVY 619
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L E++ IITGPNM GKS +RQ ALI +M+Q+G FVPA A + ++D I+TR+GASD
Sbjct: 620 LDDEKQQIIIITGPNMAGKSALLRQTALITLMSQIGCFVPAECAHIGIVDKIFTRVGASD 679
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--K 904
+I G STF+ E+NEAS IL N +++SLV+ DELGRGTST+DG++IA+A ++Y+ EH
Sbjct: 680 NISVGESTFMVEMNEASDILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNA 739
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
+ LF THY ++ +++T F + Y+VS + + V +L K+VPG S
Sbjct: 740 RAKTLFATHYHELNEMETSFK-RIKNYNVSV-----------KEVNNKVIFLRKLVPGGS 787
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
E SFG VA++A +P S + R+ I +LE E
Sbjct: 788 EHSFGIHVAKMAGMPKSIVKRSNEILKQLETE 819
>gi|146337671|ref|YP_001202719.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. ORS 278]
gi|189030703|sp|A4YKQ0.1|MUTS_BRASO RecName: Full=DNA mismatch repair protein MutS
gi|146190477|emb|CAL74476.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. ORS 278]
Length = 916
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 274/1014 (27%), Positives = 455/1014 (44%), Gaps = 175/1014 (17%)
Query: 75 PIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY- 133
P+P ++ K TP+ +Q +++K +P ++L +G + F EDAE+A+K LGI
Sbjct: 16 PVPQEATPAEAPAKLTPMMEQYLDIKAAHPGLMLFYRMGDFYELFFEDAEVASKALGIVL 75
Query: 134 ----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRG 189
H + +P R ++ RL+ G +V V +Q E A A G RG
Sbjct: 76 TKRGKHQGQDIPMCGVPVERSEDYLHRLIAQGIRVAVCEQMEDPA-AARARGNKSVVKRG 134
Query: 190 LSALYTKATLEAAEDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGV 247
+ + T TL ED +NYL+ + G+ G GD RLG+
Sbjct: 135 VVRVVTPGTLT--------EDNLLDARANNYLLSIARSRGSSG-------GD----RLGL 175
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPL--SKQTEKMLLAYAGPAS 305
++IST D + E F + L A L ++P E+++ L + E +L A
Sbjct: 176 AWIDISTSDFIVTEC--AF--AELTATLARINPNEVIVSDALYSDEAFEPVLRELAA--- 228
Query: 306 NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP 365
V +RD F G A + + + ++G+ +
Sbjct: 229 ---VTPLTRDVFDGATAERRLCDYFAV-----------------------ATMDGLAVLS 262
Query: 366 DLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEY 425
L A A + ++++ + + L R +GS M + T LE+ R + G
Sbjct: 263 RLEATAAAACVTYVERTQVGQRPPLAPPAREATGST-MAIDPATRANLELTRTLA-GERR 320
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
G+LL ++ T+T GSRLL + + PL + I RLDAV+ ++S + D
Sbjct: 321 GSLLDAIDCTVTSAGSRLLAQRLAAPLTEPAQIGRRLDAVNAF--------VADSAARED 372
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
+ L +PD+ R + R+ P + A+ IL A +
Sbjct: 373 -------------------IRVILRGAPDMTRAMARLSVGRGGPRDLAALRDGILAADQA 413
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L +L + + +++ S V+ A+ + E A D
Sbjct: 414 LARLSVLDQPPQEIAS-------------------VMAALARPARALADEFARALDEQLP 454
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCR-----------KQLGMRNLEFMSVSGI 654
+I +G F R + +E +L + R Q G++ L+ + +
Sbjct: 455 LIKRDGGF-----VRSGYDATLDETRNLRDASRLVVASMQARYADQTGVKALKIRHNNVL 509
Query: 655 THLIELPANFKVPLNWAKVNST---KKT----IRYHSPEVLTALDQLALANEELTIVCRA 707
+ +E+ A L A +N+T ++T +R+ + E+ ++A A E +
Sbjct: 510 GYFVEVTAQHGDKLMSAPLNATFIHRQTLAGQVRFTTSELGEIEAKIANAGERALNLELE 569
Query: 708 AWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSG 767
+D + + +AA A LD ALA L+ + N+VRP VD + I G
Sbjct: 570 IFDRLCAQALAIGDDLRAAAHGFAMLDVATALAKLALDDNYVRPE-VDGS--LGFAIEGG 626
Query: 768 RHPVLDTILLDN---FVPNDTNLHAEREY----CQIITGPNMGGKSCYIRQVALIGIMAQ 820
RHPV++ L F+ N +L + ++TGPNM GKS ++RQ ALI ++AQ
Sbjct: 627 RHPVVEQSLKREGQPFIANSCDLSPTPGHKSGQLWLLTGPNMAGKSTFLRQNALIALLAQ 686
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+GSFVPAS A + ++D +++R+GA+D + +GRSTF+ E+ E + IL ++LVI+DE+
Sbjct: 687 IGSFVPASRARIGIVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGERALVILDEI 746
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTK----FTGSVGTYHVSYL 936
GRGT+T DG++IA+A +++L E +C LF THY ++ + K F +V
Sbjct: 747 GRGTATFDGLSIAWAAIEHLHESNRCRTLFATHYHELTALAAKLPRLFNATVRV------ 800
Query: 937 TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ DV +L++V+PG ++ S+G +VA+LA LPP+ ISRA + AKLEA
Sbjct: 801 ----------KEWQGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVISRAKSVLAKLEA- 849
Query: 997 VSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRVEASEDLISAYRDL 1050
+ R QN A D L + + A E +S E +E+LI+A +DL
Sbjct: 850 -ADRGQNARALVDDLPLFAVPSRAAVEPA-MSKE---------TEELIAAVKDL 892
>gi|253997025|ref|YP_003049089.1| DNA mismatch repair protein MutS [Methylotenera mobilis JLW8]
gi|253983704|gb|ACT48562.1| DNA mismatch repair protein MutS [Methylotenera mobilis JLW8]
Length = 874
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 258/925 (27%), Positives = 412/925 (44%), Gaps = 148/925 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN------- 139
+ +TP+ +Q + LK ++PD+LL +G + F EDAE AA++LGI L H
Sbjct: 18 ESHTPMMRQYLGLKAQHPDMLLFYRMGDFYELFFEDAEKAARLLGIT--LTHRGSSNGQP 75
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
A +P ++ +L G V + +Q A GP R ++ + T TL
Sbjct: 76 IKMAGVPYHAAEQYLAKLAKMGEAVAICEQVGDPATSK------GPVAREVARILTPGTL 129
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
A + D N L+ + DG VG R + +++G +
Sbjct: 130 TDAALLDESRD------NQLLSIFQADGVVGLAR----------------LNLASGSFIL 167
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
E G L LE + +P+E+LL +A AS V S F
Sbjct: 168 SEIAVGLLAQELERI----APSEMLLADDFQH--------HALNASKVAKRRLSAWQFDF 215
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
A A + + +M+ + R AI A AL ++H
Sbjct: 216 DSAFATLTKQFNTY-----------DMNGFGCADMRPAI--------CAAGALLDYVKHT 256
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEV---LRNNSNGSEYGTLLHIMNHTL 436
++ L I L + S + L A T + LE+ LR G TL ++N T
Sbjct: 257 QRTTLPHINALSVE----TTSAYLQLDAATRRNLEIDLTLR----GEASPTLYSLLNTTQ 308
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G+RLLR W+ HPL DRNL+ R +A++++ ++
Sbjct: 309 TAMGARLLRHWLHHPLQDRNLVMQRHEAIADLMQT------------------------N 344
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
QF ++ +L DI+R R+ +TA P + + + +
Sbjct: 345 QFL----NLRHTLNSVADIERITARVALKTARPRDLSGL------------AVSLQQLPL 388
Query: 557 EKVTSKTLHSALLKRLILTASSPA-VIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+ + LL+ L+L+ + PA V+G LLST K A L +I++G +E
Sbjct: 389 LQAQLAQQSANLLQTLVLSLAPPAAVLG----LLSTAIK-AEPSVVLREGGVIADGYDAE 443
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R + E L S +++ G+ NL E+ SV G + P + +
Sbjct: 444 LDELRAIQTNHGEFLLSFEAAEKERTGITNLKVEYNSVHGFYIEMSRTQAESAPAEYRRR 503
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K R+ +PE+ D++ AN+ + ++ L E G Y + Q A+A L
Sbjct: 504 QTLKNVERFITPELKAFEDKVLSANDRALAREKMLYEQVLAELGQYISALQTNAGAVATL 563
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN---FVPNDTNLHAE 790
D L + + N+V P+F + I I +GRHPV++ I + F+ ND L
Sbjct: 564 DVLCCFTERAISLNYVAPMFTTE---AGIEIVNGRHPVVEQISQASGQPFIANDVVLSPY 620
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
R+ +ITGPNMGGKS ++RQ ALI ++A G +VPA+S ++ +D I TR+GASD +
Sbjct: 621 RQLL-LITGPNMGGKSTFMRQTALIVLLAYCGCYVPATSVKIGEIDRIMTRIGASDDLAG 679
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
GRSTF+ E+ E + IL N + +SLV++DE+GRGTST DG+++A+A LLE + LF
Sbjct: 680 GRSTFMVEMTETANILHNASDKSLVLLDEIGRGTSTFDGLSLAWAVAKQLLEKNRAYTLF 739
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS-KSDQDVTYLYKVVPGVSESSFG 969
THY ++ I +F + + +D+ + + +++KV G S+G
Sbjct: 740 ATHYFELTRIVDEFKYAANVH-------------LDAVEHGNSIVFMHKVEEGAVNQSYG 786
Query: 970 FKVAQLAQLPPSCISRATVIAAKLE 994
+VAQLA +P IS A A+LE
Sbjct: 787 LQVAQLAGIPKPVISAAKRKLAQLE 811
>gi|366162302|ref|ZP_09462057.1| DNA mismatch repair protein MutS [Acetivibrio cellulolyticus CD2]
Length = 872
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 243/919 (26%), Positives = 425/919 (46%), Gaps = 132/919 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +++K +Y D +L +G + F DAE A+K L I LD
Sbjct: 5 TPMMQQYLDIKGQYKDCILFFRLGDFYEMFFSDAETASKELEITLTGKDCGLDERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + ++ RL+N G+KV + +Q E A+ G R + + T T+ D
Sbjct: 65 VPFHSADSYICRLINKGYKVAICEQIEDPAMAK------GIVKRDVIRVVTPGTVT---D 115
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+D ++NYL+ + G+ V+I+TGD
Sbjct: 116 SAMLDDK---KNNYLMSLY----------------KHKTYFGIAFVDITTGDFTSTSIAL 156
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
G S L + +P+E+++ +++ L+ N+ + F G +
Sbjct: 157 GNTESKLMDEIARFAPSEMVVNSEF--LSDENLVKTLKKRFNLYISTIEDKYFEIGYSKE 214
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
++ S + + + NE ++ + G IE Q + + H++ F
Sbjct: 215 KLKSYF---SDHEICENE-FDIYINASGALLEYIE----------QTQKVNLDHIQSFNK 260
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
RI M L T + LE+ + G+LL +++ T+T G R L
Sbjct: 261 YRI------------EEYMVLDVATRRNLELTETMREKNRKGSLLWVLDRTMTSMGGRTL 308
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
R+W+ PL + I R AV+E + + +
Sbjct: 309 RKWIEQPLINIYDIRDRHLAVNEFKDK---------------------------FMVRME 341
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
V L R D++R + +I +A + +++ +I Q+ + K K L
Sbjct: 342 VRELLKRVYDMERLMGKIVLGSANCRDLVSLKNSI----GQIPYI--------KELLKDL 389
Query: 565 HSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG--DLLNLMIISNGQFSEVARARKA 622
+ +L K S I A + ++K D+ + II G EV + ++A
Sbjct: 390 NESLNK------ESNRNIDALADIFEIIDKAICDEPPVSVKEGGIIKEGYNEEVDKLKRA 443
Query: 623 VQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF--KVPLNWAKVNSTKK 678
K L L N R++ G++NL+ F V G + +E+ ++ VP N+ + +
Sbjct: 444 SVDGKTWLVELENSEREKTGIKNLKVGFNKVFG--YYLEVTKSYFSLVPPNYIRKQTLAN 501
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
R+ + E+ D + A ++L + + + G + +ALA +D + +
Sbjct: 502 CERFITEELKVIEDTVLGAEDKLVELEYQIFVEVRNKVAGEITRIKRTAKALAQVDVICS 561
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQII 797
LA ++ +++ P ++E V IHI GRHPV++ ++ FVPNDT L+ + II
Sbjct: 562 LAEVADRESYTMPEI--NNEDV-IHITDGRHPVVEKMIDQGEFVPNDTYLNMSEDQIAII 618
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS Y+RQVALI +MAQ+GSFVPA SA + + D I+TR+GASD + G+STF+
Sbjct: 619 TGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAVIGIADRIFTRVGASDDLAAGQSTFMV 678
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVTHYP 915
E++E + IL N T++S++I+DE+GRGTST+DG++IA++ ++++ + K+ LF THY
Sbjct: 679 EMSEVANILSNATSRSILILDEIGRGTSTYDGLSIAWSVIEHISDRKRIGARTLFATHYH 738
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ +++ G V Y +S + +D+ +L K++ G +++S+G +VA+L
Sbjct: 739 ELTELEGSIDG-VKNYCISV-----------EEKGEDIIFLRKIIRGGADNSYGIQVARL 786
Query: 976 AQLPPSCISRATVIAAKLE 994
A +P I+RA I +LE
Sbjct: 787 AGVPVPVINRAKEILKELE 805
>gi|260910738|ref|ZP_05917396.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 472
str. F0295]
gi|260635154|gb|EEX53186.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 472
str. F0295]
Length = 874
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 247/937 (26%), Positives = 430/937 (45%), Gaps = 159/937 (16%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----- 139
+++ TP+ +Q K K+PD LL+ G + + EDA A++VLGI +N
Sbjct: 4 NDQGLTPMMKQFYSFKAKHPDALLLFRCGDFYETYSEDAVEASRVLGITLTKRNNKGNSD 63
Query: 140 -FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
A P L+ ++ +L+ AG +V + Q E + RG++ L T
Sbjct: 64 ATEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKLTK------TLVKRGITELVTPG- 116
Query: 199 LEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
V G+ E+N+L + + GK GV ++ISTG+
Sbjct: 117 ------VAMGDTVLNYKENNFLAAI-----HFGK-----------TACGVAFLDISTGEF 154
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
+ G+ + ++ E +L S +P E+L + K E+ Y G ++ C
Sbjct: 155 ITGQGSFDYV----EKLLGSFAPKEVLYERTHKKDFER----YFG----------NKHCV 196
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT-- 375
L + + + + L + QN+ +G ++ + +Q L +T
Sbjct: 197 F---ELDDWVFTEQTARQKLLKHFGTQNL----KGFGVEHVQSGVVAAGAIMQYLEITQH 249
Query: 376 --IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
I H+ L + + L T++ LE+++ + +LL++++
Sbjct: 250 TNIGHITSLAL------------IEEDRYVRLDKFTIRSLELIQPMQDDG--ASLLNVVD 295
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T+T G RLLRRW+ PL + I RLD V D
Sbjct: 296 RTVTAMGGRLLRRWLVFPLKEVKPIEQRLDVV------------------------DYIF 331
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI-- 551
P++ +L L +G D++R I+++ +P E + + A+ + +Q L I
Sbjct: 332 RYPEYRALLDEQLHRIG---DLERIISKVAVGRVSPREMVQLKNAL----QAIQPLKIAC 384
Query: 552 ---DGEYREKVTSK-TLHSALLKRLI--LTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
D E ++ + L +L R+ + P V+ +
Sbjct: 385 LESDNETIRQIGEQMNLCESLRDRIEHEIQPDPPLVVNRGN------------------- 425
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK 665
+I+ G E+ R + ++ L + + G+ +L+ + + +E+ +K
Sbjct: 426 -VIAEGFSPELDELRNISRGGRDFLIDIQQREAESTGISSLKIGYNNVFGYYLEVRNTYK 484
Query: 666 --VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
VP W + + + RY + E+ +++ A+E++ + ++ + + +
Sbjct: 485 DKVPEEWVRKQTLAQAERYITQELKEYEERILGADEKIQSLEERLFNELVTATQEFIPQI 544
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFV 781
Q +A LDCL + A + +VRPV ++D + + I GRHPV++T L +++V
Sbjct: 545 QINANVVARLDCLLSFAKTAEENRYVRPV-IEDSDALDIR--QGRHPVIETQLPPGEHYV 601
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND L ER+ IITGPNM GKS +RQ ALI ++AQ+G FVPA SA + ++D I+TR
Sbjct: 602 PNDIQLDTERQQIIIITGPNMAGKSALLRQTALIVLLAQIGCFVPAESARVGLVDKIFTR 661
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD+I QG STF+ E+ EAS IL N + +SLV+ DELGRGTST+DG++IA+A ++YL
Sbjct: 662 VGASDNIAQGESTFMVEMTEASNILNNVSPRSLVLFDELGRGTSTYDGISIAWAIVEYLH 721
Query: 902 EHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
E K LF THY ++ +++ F + ++VS + ++ K V ++ ++
Sbjct: 722 EQPKARARTLFATHYHELNEMEKNFK-RIKNFNVS-------VKELNGK----VIFMRRL 769
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G SE SFG VA +A +P S + RA + +LEA+
Sbjct: 770 ERGGSEHSFGIHVADIAGMPKSIVKRANTVLKQLEAD 806
>gi|206900896|ref|YP_002250799.1| DNA mismatch repair protein MutS [Dictyoglomus thermophilum H-6-12]
gi|206739999|gb|ACI19057.1| DNA mismatch repair protein MutS [Dictyoglomus thermophilum H-6-12]
Length = 853
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 233/919 (25%), Positives = 423/919 (46%), Gaps = 140/919 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH-----NFMTAS 144
TPL +Q +K ++ D +L+ +G + F EDA++ ++ L I A
Sbjct: 5 TPLYRQYKSIKDQFSDAILLFRLGDFYEAFEEDAKIISQELDIVLTSKEIGKGRRIPMAG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P L+ ++ +LV +KV + +Q E A+ G R + + T TL ED
Sbjct: 65 VPYHALDSYLSKLVQKKYKVAICEQVEDPAL------AKGLVKREVVRVITPGTL--VED 116
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+++D N + ++ + + + +++STG+ E+
Sbjct: 117 ----------------TLLEDKNN--NFLSSIYALNKEY-ISLATIDVSTGEFFATEWRG 157
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
+ + L+ L P E++L L ++L ++++ E + +
Sbjct: 158 KEAEEIIYSELVRLKPKEIILPFSLKDLFSELL-------TDLKREVDPKITLLDDN--- 207
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
Y + + ++D+ + ++ G +N + + I ++ +
Sbjct: 208 -----YFQFSDYAIKYSDDKE----KYPLAERSVNGALNYIKEVMFTIPTHIERVEIYQP 258
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
++ + L ++ ++ LE+L G G+L+ +++ TLT G+RLL
Sbjct: 259 QQYLILDST---------------AIKHLELLETVREGQRRGSLIWVLDKTLTSMGARLL 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
++W+ PL + N I R A+ E E R E +
Sbjct: 304 KKWILQPLLNVNAIKKRQGAIKEFLEKEPWRREIEDI----------------------- 340
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILY---AGKQLQQLHID--GEYREKV 559
L PD++R +RI + TATP E I + QA+ + K L++ D E +E +
Sbjct: 341 ----LKEMPDLERINSRINYNTATPKELIYLRQALSFLPLLRKSLEKAESDRLKELKENL 396
Query: 560 TS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
+ L+ L + L+ S P+ I D G I +G +
Sbjct: 397 PDLEPLYEELDRALV--ESPPSHI--------------KDGG------YIKDGYDPNLDE 434
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNST 676
R+ ++ +K+ L +L N R++ G+++L+ + IE+ AN VP ++ + +
Sbjct: 435 LRRLLRESKDWLINLENRERERTGIKSLKIGYNQVFGYYIEVTKANLNLVPPDYIRKQTL 494
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
R+ +PE+ +++ A + + + + + K+ + + Q + +D
Sbjct: 495 VNAERFITPELKEWENKILHAEDNIKKIEEELFQNLRKKVIEHSRDITTFAQIIGEIDVY 554
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQ 795
+LA +R N+V P +D++ + I GRHPV++ +L FVPND L+ E+ +
Sbjct: 555 ISLAKAAREYNYVCPQVTNDYDVI---IREGRHPVIERMLPPGTFVPNDAYLNREK-FID 610
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNM GKS YIRQ+ALI I+AQ+GSF+PA A++ V+D I+TR+GA D I G STF
Sbjct: 611 LITGPNMAGKSTYIRQIALIIILAQMGSFIPAKEAKIGVVDRIFTRIGAWDDISSGESTF 670
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
L E+ E IL + T +SL+I+DE+GRGTST+DG++IA+A ++Y+ K LF THY
Sbjct: 671 LVEMKEVGNILSHATERSLIILDEVGRGTSTYDGISIAWAIVEYIHNKIKAKTLFATHYH 730
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ +++ + L K + + +++ +L+K+V ++ S+G VAQL
Sbjct: 731 ELTELEKE------------LRHLKNLSVAVQEKGKEIIFLHKIVDKPADKSYGIYVAQL 778
Query: 976 AQLPPSCISRATVIAAKLE 994
A LP I RA I +LE
Sbjct: 779 ADLPREVIERAEKILLELE 797
>gi|307943418|ref|ZP_07658762.1| DNA mismatch repair protein MutS [Roseibium sp. TrichSKD4]
gi|307773048|gb|EFO32265.1| DNA mismatch repair protein MutS [Roseibium sp. TrichSKD4]
Length = 906
Score = 273 bits (697), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 258/936 (27%), Positives = 436/936 (46%), Gaps = 135/936 (14%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASI 145
+ K TP+ Q +E+KT PD LL +G + F DAE+AA+ LGI A I
Sbjct: 13 DSKVTPMMAQYIEIKTANPDSLLFYRMGDFYELFFHDAEVAAQALGITLTKRGKHQGADI 72
Query: 146 PTFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLE 200
P + VH +++L++ G +V V +QTE A +A G R + L T TL
Sbjct: 73 PMCGVPVHAADDYLQKLISLGHRVSVCEQTEDPA-EAKKRGSKSVVRRDVVRLVTPGTLT 131
Query: 201 AAEDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
ED G +N+L + +++ G D G+ +++STG
Sbjct: 132 --------EDRLLDAGANNFLAAL-------SRLKAG--SQEGDAIYGLAWIDMSTGSFQ 174
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE-KMLLAYAGPASNVRVECASRDCF 317
E + L A L ++P EL+L L ++TE + L+ G A + R F
Sbjct: 175 VSETD----HQRLSADLAQIAPRELILADNLLQETELRQLVELTGSA----LSPVPR-AF 225
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
G A+ ++ Y G TL +G + A + +
Sbjct: 226 FDGSTAADRLAHY--FGVKTL--------------------DGFGTFSRAELTAASGILA 263
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
++++ L L R +GS M + T LE+ R S G + G+LL ++ T+T
Sbjct: 264 YIEKTQLGERPPLDPPTRE-AGSGRMLIDPATRANLELSRTLS-GEKQGSLLTTIDRTVT 321
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G+RLL + PL ++I+ R D+V + +E + +H
Sbjct: 322 GGGARLLASRLAGPLIRPDIINQRHDSVD-------FFLNNEIMREH------------- 361
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+ +L +PD+ R ++RI + P + +++ Q + A L G
Sbjct: 362 -------LRQTLKGAPDMARALSRIALQRGGPRDILSIAQGLEAAQSLLDMTGQGGNIPT 414
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQF 613
++ + ++L K +P +G A+L+ + ++ D G +++G
Sbjct: 415 ELAAA--RTSLEK-------APHALG--AELMVAIKEDPPLLKRDGG------FVASGYD 457
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF-----KVPL 668
+ + R +++ + L +QLG+R+L+ + + IE P P
Sbjct: 458 ANLDELRALRDESRKVIAQLQANYSEQLGLRSLKIKHNNVLGWFIETPTAQADKLQDDPA 517
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
+ + +R+ + E+ ++A A E + +D E +AA
Sbjct: 518 RFIHRQTMAGAMRFTTTELADLESKIASAGERSMAIELEVFDRLTSEIVSAGDAIKAAAH 577
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL----DNFVPND 784
L+ LD ALA L++++N RP+ E I GRHPV++ L D+FV ND
Sbjct: 578 GLSVLDVSAALAKLAQDENHSRPLI---DESRAFDIKGGRHPVVERALKHSGGDSFVAND 634
Query: 785 TNL--HAEREY--CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
NL A+RE +ITGPNM GKS ++RQ ALI +MAQ+G+FVPA+SA + ++D +++
Sbjct: 635 ANLGPQADRESGCIWLITGPNMAGKSTFLRQNALIAVMAQMGAFVPATSAHIGIVDRLFS 694
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+GA+D + +GRSTF+ E+ E + IL +SLVI+DE+GRGT+T DG++IA+AT+++L
Sbjct: 695 RVGAADDLARGRSTFMVEMVETAAILNQAGDRSLVILDEIGRGTATFDGLSIAWATIEHL 754
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E K LF THY ++ + K + LT+ V + D +V +L+++V
Sbjct: 755 HEVNKSRALFATHYHELTALSQK---------LDRLTNATVSV---KEWDGEVIFLHEIV 802
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
PG ++ S+G +VA+LA LP S + R+ + ++LE +
Sbjct: 803 PGAADRSYGIQVAKLAGLPASVVERSQQVLSQLEEQ 838
>gi|238027984|ref|YP_002912215.1| DNA mismatch repair protein MutS [Burkholderia glumae BGR1]
gi|237877178|gb|ACR29511.1| DNA mismatch repair protein MutS [Burkholderia glumae BGR1]
Length = 900
Score = 273 bits (697), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 262/933 (28%), Positives = 413/933 (44%), Gaps = 137/933 (14%)
Query: 78 TPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---- 133
TP QT K +TP QQ + +K+++PD L+ +G + F +DAE AA++L +
Sbjct: 10 TPD-QTEGVKAHTPYMQQYLRIKSEHPDTLVFYRMGDFYELFYDDAEKAARLLDLTLTQR 68
Query: 134 -AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
A + A +P + ++ +LV G V + +Q A GP R +
Sbjct: 69 GASGGNPIRMAGVPHHAVEQYLAKLVKFGESVAICEQIGDPATSK------GPVERKVVR 122
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
+ T TL A + D +L+ + ++G + GV +G+ + +
Sbjct: 123 VVTPGTLTDAALLSDKAD------VFLLAL-----SLGHNKRGVV-----TNIGLAWLNL 166
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
++G + E L + LE + PAE+L G + G + RV
Sbjct: 167 ASGALRLAEIAPDELGAALERI----RPAEILAGDGAIEAIPP------GAGAVTRVPAW 216
Query: 313 SRDCFIGGGALA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
D G L +V SL E G +L+ SA + A
Sbjct: 217 HFDVASGTQRLCSQLDVASL-EGFGAHSLT----------------SACGSAGALLLYAA 259
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
+RH++ +E + S + L T + LE L G+E TL
Sbjct: 260 STQGQQLRHVRSLKVE------------TESEYIGLDPATRRNLE-LTETLRGTESPTLY 306
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ T GSRLLR W+ HP SV + +
Sbjct: 307 SLLDTCCTTMGSRLLRHWLHHP-------------------------PRASVAAQGRQQA 341
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
++E L ++ +L + D++R R+ +A P + ++ L L
Sbjct: 342 IGALLEAAGAASLDNLRRALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL 397
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNL 605
RE V T H+ L RL + PA G A L + E A D G
Sbjct: 398 ------RELVAPITQHADTLARLEAALAPPA--GCADLLARAIAPEPAAMVRDGG----- 444
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPAN 663
+I+ G +E+ R ++ + L L R + G+ NL EF V G +
Sbjct: 445 -VIARGYDTELDELRDISENCGQFLIDLEARERARTGIPNLRVEFNRVHGFYIEVTRGQT 503
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
KVP ++ + + K RY +PE+ T D+ A E +A +++ L+ + +
Sbjct: 504 DKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALSREKALYEALLQSLLPFIEDC 563
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
Q ALA LD L A A +R ++V P F D+ + I I GRHPV++ ++ F+ N
Sbjct: 564 QRVAAALAELDVLGAFAERARELDWVAPSFSDE---IGIDIEQGRHPVVEA-QVEQFIAN 619
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
D L ++R+ +ITGPNMGGKS ++RQ ALI +MA VGS+VPA SA +D I+TR+G
Sbjct: 620 DCRLGSDRKLL-LITGPNMGGKSTFMRQTALIAMMAYVGSYVPAKSARFGPIDRIFTRIG 678
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + GRSTF+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL H
Sbjct: 679 AADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLSH 738
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
C LF THY ++ + +F + + + H ++ +L+ V G
Sbjct: 739 NGCYTLFATHYFELTQLPAEFPHAANVHLSAVEHGHGIV------------FLHAVDEGP 786
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ S+G +VAQLA +PP+ I A A LE +
Sbjct: 787 ANQSYGLQVAQLAGVPPAVIRAARKHLAHLEQQ 819
>gi|156932768|ref|YP_001436684.1| DNA mismatch repair protein MutS [Cronobacter sakazakii ATCC
BAA-894]
gi|171769802|sp|A7MJ43.1|MUTS_CROS8 RecName: Full=DNA mismatch repair protein MutS
gi|156531022|gb|ABU75848.1| hypothetical protein ESA_00558 [Cronobacter sakazakii ATCC BAA-894]
Length = 853
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 258/931 (27%), Positives = 415/931 (44%), Gaps = 166/931 (17%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ ++LK ++PD+LL +G + F +DA+ A+++L I A A
Sbjct: 10 HTPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMA 69
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LVN G V + +Q A GP R + + T T+
Sbjct: 70 GVPHHAVENYLAKLVNLGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEA 123
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L + D GF G ++IS+G E
Sbjct: 124 LLQERQD------NLLAAIWQD------------SKGF----GYATLDISSGRFRVSEPQ 161
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D R + A L +PAELL + ++
Sbjct: 162 D---RETMAAELQRTNPAELLYAEDFAE-------------------------------- 186
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQ------GNHRSAIEGIMNMPD--LAVQALALT 375
MSL E + +D Q G G+ N P A L
Sbjct: 187 ---MSLIEGRRGLRRRPLWEFELDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQY 243
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
++ ++ L I + R G + + A T + LE+ +N + G E TL +++ T
Sbjct: 244 VKDTQRTSLPHIRSITME-RQQDG---IIMDAATRRNLEITQNLAGGVE-NTLASVLDCT 298
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
+T GSR+L+RW+ P+ D +++ R A++ + E Y T ++
Sbjct: 299 VTPMGSRMLKRWLHMPVRDTSVLRHRQQAIAALME----YSTE---------------IQ 339
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH----- 550
P VL +G D++R + R+ RTA P + +A M+ +A +QL L+
Sbjct: 340 P--------VLRQVG---DLERILARLALRTARPRD-LARMR---HAFQQLPTLNTLLAD 384
Query: 551 IDGEY----REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
I+ EY RE++ LL+R I+ A P V+ + D G
Sbjct: 385 IEAEYVQTLREQMGDFAELRDLLERAIIEA--PPVLVR-------------DGG------ 423
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF 664
+I+ G E+ R A + LD L R++LG+ L+ F +V G + +
Sbjct: 424 VIAPGYHEELDEWRALADGATDYLDRLEIREREKLGIDTLKVGFNAVHGYFIQVSRGQSH 483
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP+++ + + K RY PE+ D++ + + + + +D + AE Q
Sbjct: 484 MVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLAELQ 543
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
+ ALA LD L LA + N+ P D +P I + GRHPV++ +L + F+ N
Sbjct: 544 KSAAALAELDVLTNLAERADTLNYHCPTLTD--KP-GIRLVEGRHPVVERVLNEPFIANP 600
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
+L +R IITGPNMGGKS Y+RQ ALI +MA +GSFVPA AE+ +D I+TR+GA
Sbjct: 601 LSLSPQRRML-IITGPNMGGKSTYMRQTALIVLMAYIGSFVPAEQAEIGPIDRIFTRVGA 659
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A + L
Sbjct: 660 ADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLANRI 719
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
K + LF THY ++ + K G V H+ + + + +++ V G +
Sbjct: 720 KALTLFATHYFELTQLPEKMEG-VANVHLDAI-----------EHGDTIAFMHSVQDGAA 767
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
S+G VA LA +P I RA +LE+
Sbjct: 768 SKSYGLAVAALAGVPKEVIKRARQKLRELES 798
>gi|254252001|ref|ZP_04945319.1| Mismatch repair ATPase [Burkholderia dolosa AUO158]
gi|124894610|gb|EAY68490.1| Mismatch repair ATPase [Burkholderia dolosa AUO158]
Length = 885
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 255/926 (27%), Positives = 410/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K +PD L+ +G + F EDAE AA++L + A + A
Sbjct: 12 HTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAERAARLLDLTLTQRGASAGNPIKMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G V + +Q A GP R + + T TL A
Sbjct: 72 GVPHHAVEQYLAKLVKMGESVAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D YL+ + G + GV V +G+ + +++G + E
Sbjct: 126 LLSDKND------VYLLAMC-----TGHNKRGVV-----VNIGLAWLNLASGALRLAEIE 169
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 170 PEQLGAALERI----RPAEILTADGTTDTVP------AGAGTIKRVPAWHFDIASGTQRL 219
Query: 324 AEVMSL--YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ + + + G +L+ SA + A +RH++
Sbjct: 220 CDQLDVASLDGFGAHSLT----------------SACGAAGALLLYAAATQGQQLRHVRS 263
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+E + + + L T + LE L G+E TL +++ T GS
Sbjct: 264 LKVE------------NETEYIGLDPATRRNLE-LTETLRGTESPTLYSLLDTCCTTMGS 310
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLR W+ HP S+ + +++G + +D +
Sbjct: 311 RLLRHWLHHP----------------PRASVAAQSRQQAIGALLDAPADAS--------- 345
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L ++ ++L + D++R R+ +A P + ++ L L RE++ +
Sbjct: 346 LDALRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERIEA 395
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLL-STVNKEAA----DQGDLLNLMIISNGQFSEV 616
++ LKR+ PA + LL S + E A D G +I+ G +E+
Sbjct: 396 IAANADALKRIHTALVPPA---ECLDLLTSAIAPEPAAMVRDGG------VIARGYDAEL 446
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 447 DELRDISENCGQFLIDLEARERARTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 506
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E R+ +D L+ + E Q ALA LD
Sbjct: 507 TLKNAERYITPELKTFEDKALSAQERALSRERSLYDGVLQALLPFIPECQRVASALAELD 566
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F DD V I I GRHPV++ ++ F+ ND ER+
Sbjct: 567 VLAAFAERARALDWVAPTFTDD---VGIEIEQGRHPVVEA-QVEQFIANDCRFGPERKLL 622
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA SA +D I+TR+GA+D + GRST
Sbjct: 623 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSARFGPIDRIFTRIGAADDLAGGRST 681
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL H C LF THY
Sbjct: 682 FMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAHNGCYTLFATHY 741
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 742 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVNEGPANQSYGLQVAQ 789
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +S+
Sbjct: 790 LAGVPAPVIRAARKHLAYLEQQSASQ 815
>gi|344302169|gb|EGW32474.1| mismatch repair ATPase MSH6 [Spathaspora passalidarum NRRL Y-27907]
Length = 1223
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 256/963 (26%), Positives = 423/963 (43%), Gaps = 112/963 (11%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+TP P+ TL IP + K+T E+Q E+K+K ++ + G + +
Sbjct: 298 RTPDDPEYDSRTLY-IPQAAWS-----KFTAFEKQYWEIKSKMWTTVVFFKKGKFYELYE 351
Query: 121 EDAEMAAKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH 178
DA +A L I N A IP + ++ G+KV V Q E+ K
Sbjct: 352 NDAIIANTEFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVDQKESLLAKEM 411
Query: 179 GPGKAGP---FGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNG 235
G R L+ + T TL + + S Y + + +++ + G +
Sbjct: 412 RGGSTKEEKIIKRELTGILTGGTLTDLDMISDDM------STYCLSIKEEEKDDG---SK 462
Query: 236 VFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEK 295
+FG F V+ ST ++ E D + L+ ++ + P E++ EK
Sbjct: 463 IFGVAF--------VDTSTSELNLIELEDDPECTKLDTLITQVKPKEIIC--------EK 506
Query: 296 MLLAYAGPASNVRVECASRDCFIGG--GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 353
L G A+ + CA + I + E Y+ E+ +++ D+ +
Sbjct: 507 GNLC--GIANKILKFCAHNNHQIWNQLNPITEFWD-YDVTVENLVTSKYYPAEDLDDFSQ 563
Query: 354 HRSAIEGIMNMPDLAVQALALTIRHLKQFGLER-IMCLGA--SFR-SLSGSMEMTLSANT 409
+ + +A A + +LK L+ IM LG +R S + + + L T
Sbjct: 564 YPVVLTSFKEKHQVAFNAFGGLLYYLKTLKLDSSIMSLGNIHEYRISRNEASHLILDGIT 623
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+L N+++G + GTL ++N T +G R L++W+ +PL N I+ R DAV +
Sbjct: 624 LNNLEILNNSTDGGDKGTLFKLLNRATTPFGKRQLKKWILYPLMKINEINQRYDAVDYLM 683
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
R+ I+ S L L PD++R + RI
Sbjct: 684 NDGLEIRS-----------------------IVESCLNEL---PDLERLLARIHAGNLRF 717
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
+F+ V+++ K L QL GE+ + S + I P I + L
Sbjct: 718 RDFLKVVESFESIAKCLNQL---GEFT------NVESGAFYKYI--REFPQEIAR----L 762
Query: 590 STVNKEAADQGDLLNLMII-SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEF 648
T ++A D+ N +II + G + ++ + + +LD + +K+ + +
Sbjct: 763 ITEWEDAFDREQAKNDVIIPAKGIDEQFDESQAIIDDLQGQLDQHLKEYKKRFKSHEICY 822
Query: 649 MSVSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCR 706
+LIE P ++P +W ++ +T K R+ SPEV + +L E +VC
Sbjct: 823 RDSGKEIYLIEFPVKLVKQIPNDWQQMGATSKVKRFWSPEVRKLVRELLEQRERHKMVCD 882
Query: 707 AAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF--VRPVFVDDHEPVQIHI 764
+ +F +Y + + ++ +DCL ALA +S + RP FVD I+
Sbjct: 883 TLRNRMYSKFDSHYNIWMKVIATISKIDCLLALAKVSGTIGYPSCRPKFVDSDRGY-INF 941
Query: 765 CSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
RHP I F+PND L ++ + ++TG N GKS +R AL I++Q+G +
Sbjct: 942 QELRHPCF--ISTREFIPNDVMLGGDQPHFGLLTGANAAGKSTLMRTTALAVILSQIGCY 999
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
+PA SAEL +D I TR+GA+D+I QG+STF EL+E IL N T +SLVI+DELGRG
Sbjct: 1000 IPAQSAELTPVDRIMTRLGANDNILQGKSTFFVELSETKKILSNATPRSLVILDELGRGG 1059
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV--- 941
S+ DG AIA A L +L H + + F THY GT S+ T ++
Sbjct: 1060 SSSDGFAIAEAVLYHLATHLQSLGFFATHY--------------GTLGASFKTHPQIKPL 1105
Query: 942 -MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
MG + + +++T+LYK+ G + SFG VA + + + A + A E S+
Sbjct: 1106 RMGIIVDSNTRNITFLYKLEEGAASGSFGMNVASMCGISDEIVVNAEMAAKNYEQTSKSK 1165
Query: 1001 VQN 1003
N
Sbjct: 1166 KSN 1168
>gi|390954418|ref|YP_006418176.1| DNA mismatch repair protein MutS [Aequorivita sublithincola DSM
14238]
gi|390420404|gb|AFL81161.1| DNA mismatch repair protein MutS [Aequorivita sublithincola DSM
14238]
Length = 882
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 256/949 (26%), Positives = 423/949 (44%), Gaps = 178/949 (18%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
P+ KK TPL +Q +K KYPD LL+ VG + FGEDA AA +L I +
Sbjct: 6 PARAFIMAKKETPLMKQYNTIKAKYPDALLLFRVGDFYETFGEDAIRAAGILNITLTARN 65
Query: 139 N----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY 194
N A P LN ++ +LV AG +V + Q E + RG++ L
Sbjct: 66 NGGDNVELAGFPYHSLNTYLPKLVMAGCRVAICDQLEDPKMTK------TIVKRGVTELV 119
Query: 195 TKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIST 254
T V +D +SN + V FG LGV +++ST
Sbjct: 120 TPG-------VAFNDDILQSKSNNFLAAVH------------FGSK---NLGVSFLDVST 157
Query: 255 GDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASR 314
G+ + E + ++ + +L + +P+E+L SKQ R
Sbjct: 158 GEFLVSEGSAEYI----DKLLQNFNPSEVL----FSKQ--------------------KR 189
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA- 373
F +T N H +E + D + L
Sbjct: 190 KLF-----------------SETFGNE-----------YHVFHLEDWIFQTDYSFGTLTK 221
Query: 374 -LTIRHLKQFGLER----IMCLGASFRSLSGSMEMTL-----------------SANTLQ 411
+++LK FG++ I+ GA+ LS + L T++
Sbjct: 222 HFDVKNLKGFGVDHLEDGIIAAGAALHYLSETRHTKLQHISRLSRIAEDEYVWMDRFTIR 281
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
LE+ ++ + TLL +++ T++ G RLL+RW+ PL + + I+ R + VS + ++
Sbjct: 282 NLELYHSHQQNA--VTLLDVIDKTISPMGGRLLKRWMALPLKNADKINRRHEVVSFLLDN 339
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
VT+ + Q Y R D++R I+++ P E
Sbjct: 340 ------------------PVTLEKTQQY---------TKRIGDLERLISKVATGKVNPRE 372
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYRE-KVTSKTLHSALLKRLILTASSPAVIGKAAKLLS 590
I + + L A ++ L ++ + K+ + LH L R K+
Sbjct: 373 VIQLKNS-LEAVVPIKLLALNSKNESLKIIGEQLHDCELLR--------------NKIKE 417
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
T+ ++A ++L I+ G + R + K LD ++ K G+ +L+ S
Sbjct: 418 TLFEDAP--VNILKGNSIAEGFSETLDELRNISANGKGYLDQMLQRETKLTGISSLKIAS 475
Query: 651 VSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA 708
+ + IE+ K VP W + + RY + E+ ++ A E++ + +
Sbjct: 476 NNVFGYYIEVRNTHKDKVPQEWIRKQTLVNAERYITEELKEYETKILGAEEKILALEQEI 535
Query: 709 WDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGR 768
+ ++ Y A Q +A +DCL + AT ++ N+ RP+ D + + I GR
Sbjct: 536 FGKLVEWMLQYIASVQQNAALIAQMDCLCSFATQAKEANYTRPLLDDTFD---LDIKDGR 592
Query: 769 HPVLDTILLDN--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
HPV++ L + ++ ND L E + +ITGPNM GKS +RQ ALI ++AQ+GSFVP
Sbjct: 593 HPVIEKQLPPDAPYIANDVFLDCENQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVP 652
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
AS+ + +D I+TR+GASD+I G STF+ E+NE + IL N + +SL+++DE+GRGTST
Sbjct: 653 ASAVRMGCVDKIFTRVGASDNISMGESTFMVEMNETASILNNLSEKSLILLDEIGRGTST 712
Query: 887 HDGVAIAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPM 945
+DG++IA+A +YL EH + LF THY ++ ++ F + Y+VS
Sbjct: 713 YDGISIAWAISEYLHEHPSRAKTLFATHYHELNEMTETF-ARIKNYNVSV---------- 761
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ +V +L K+VPG S SFG VA++A +P + + RA I +LE
Sbjct: 762 -KELKDNVLFLRKLVPGGSHHSFGIHVAKMAGMPQAVLLRANKILKRLE 809
>gi|20089412|ref|NP_615487.1| DNA mismatch repair protein MutS [Methanosarcina acetivorans C2A]
gi|44888230|sp|Q8TTB4.1|MUTS_METAC RecName: Full=DNA mismatch repair protein MutS
gi|19914310|gb|AAM03967.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A]
Length = 900
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 254/931 (27%), Positives = 421/931 (45%), Gaps = 136/931 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT------A 143
TP +Q E K YPD L+ +G + FGEDA+ AK L I T A
Sbjct: 6 TPAMRQYYEAKQAYPDTLIFFRMGDFYESFGEDAKTIAKELEITLTARGKDRTGERMPLA 65
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
IP ++ ++ RL+N G+KV + +Q E P KA + T A
Sbjct: 66 GIPYHAIDTYLPRLINKGYKVAICEQLED-------PKKAKG--VVKRGVVRVVTPGTAI 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
D D +NYL+ V +G ++G G+ ++ G+ ++ISTG+ + +F
Sbjct: 117 DSSMFSDAS---NNYLMAVAGREGG----KSGKNGEK-EMEFGISFLDISTGEFLTTQFT 168
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML--LAYAGPASNVRVECASRDCFIGGG 321
D S+ +K+L LA PA EC G
Sbjct: 169 D-------------------------SENFDKLLSELARMHPA-----ECILPPSLYGNS 198
Query: 322 ALAEVMSLYENMGEDTLSNN-EDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
L + E T+ + E G G+ + + Q L + +
Sbjct: 199 ELTG------KLREHTIVQEFAPEVFGTEEAGEKLKTHFGVATLEGMGCQKLEFAV-YSA 251
Query: 381 QFGLE-------RIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
LE R + + R+ S + M L + TL+ LE+++N + + +L +N
Sbjct: 252 WAALEYAKTTQMRDLTHINTLRTYSNTEFMILDSITLRNLEIVKNVRDEGDENSLYRTLN 311
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN--SDV 491
T T G+R L++W+ PL I+ RLDA+ E+AE +S+ ++D ++ SDV
Sbjct: 312 CTRTPMGNRTLKKWLLKPLLSVEKINPRLDAIEELAE--------DSLLRYDIRDWLSDV 363
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
DI+R + RI + A+ + +A+ ++ L +
Sbjct: 364 R---------------------DIERLVGRIVYGNASARDLVALKKS----------LGV 392
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG--DLLNLMIIS 609
R+ + L A + L A A + +L + D+ + +I
Sbjct: 393 VPSLRDSL----LEKARFEMLKEIAEGLASFSELEELAEMIEIAIMDEPPVSVREGGMIK 448
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVP 667
+G E+ R ++K+ + + R++ G+++L+ + IE+ AN +VP
Sbjct: 449 SGYSPELDELRDISSNSKQWIAAFQQKERERSGIKSLKVGYNKVFGYYIEVTHANSSQVP 508
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
++ + + R+ +PE+ + ANE+ + + + E Q
Sbjct: 509 EDYIRKQTMANAERFFTPELKEKESLILTANEKAVALEYEIFAEITRTLSARSRELQETA 568
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNL 787
+ + LD L +LA + N N+ RP +D +I I GRHPV+++ + FVPNDT +
Sbjct: 569 ERIGTLDVLASLAEATENNNYTRPQLTED---CKILIRDGRHPVVESTVSGGFVPNDTEM 625
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ ++TGPNM GKS Y+RQ ALI IMAQVGSFVPAS A + ++D ++TR+GA D
Sbjct: 626 DCKENQFLLVTGPNMAGKSTYMRQTALIAIMAQVGSFVPASYASVGIIDQVFTRIGAFDD 685
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ G+STF+ E+ E + IL N + +SLV++DE+GRGTST+DG +IA A +++L K
Sbjct: 686 LASGQSTFMVEMVELANILNNASPKSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVG 745
Query: 908 V--LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
+ LF THY ++ ++ K V YH++ + ++ +L K+VPG ++
Sbjct: 746 IRALFATHYHQLTALEEKLK-RVKNYHIAV-----------KEDGHELVFLRKIVPGATD 793
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
S+G VA+LA +P I RA I +LE E
Sbjct: 794 RSYGIHVARLAGVPEKVIERANEILKELERE 824
>gi|410584485|ref|ZP_11321588.1| DNA mismatch repair protein MutS [Thermaerobacter subterraneus DSM
13965]
gi|410504420|gb|EKP93931.1| DNA mismatch repair protein MutS [Thermaerobacter subterraneus DSM
13965]
Length = 1038
Score = 272 bits (696), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 305/604 (50%), Gaps = 63/604 (10%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
+ + AN+ + LE++R +GS GTLL +++ T T G RLLR+W+ PL D ISARL
Sbjct: 294 LAIDANSRRNLELVRRLRDGSRQGTLLDVLDLTETAMGRRLLRQWIERPLVDPAAISARL 353
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV + + +P ++ + + L D+ R + R+
Sbjct: 354 DAVEAL------------------------VRDP---FLRAGLRQQLAGMQDLPRLLGRV 386
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQL--HIDGEYREKVTSKTLHSALLKRL--ILTASS 578
++ A + + + +A+ ++L +L ++G R + L RL + A
Sbjct: 387 GYQQANARDLLGIARAL----ERLPELAAQLEGAAR---------AGPLGRLEAVRQALD 433
Query: 579 PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCR 638
P + G AA+L + + + +I +G EV R+A+ + + +L R
Sbjct: 434 PQLAGLAARLRGALVDDPPT--GITEGGLIRDGFHPEVDALRQAMAQGRHWIAALEARER 491
Query: 639 KQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLAL 696
++ G+++L+ F V G + VP ++ + + R+ +PE+ ++
Sbjct: 492 ERTGIKSLKVGFNKVFGYFIEVTRANRHLVPPDYERRQTLAGAERFVTPELKAMESRILG 551
Query: 697 ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDD 756
A E L + + +E + QA ALA LD L ALA + +VRP D
Sbjct: 552 AEERLAALEHQLFLELRQEVAAAIPQLQATADALAELDVLAALAEAAARYGYVRPKLAAD 611
Query: 757 HEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIG 816
++ I +GRHPVLD L FVPND +L E E +ITGPNM GKS ++RQVALI
Sbjct: 612 R---RLRIKAGRHPVLDRTLEGRFVPNDIDLDGEEERVMLITGPNMAGKSTFMRQVALIV 668
Query: 817 IMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVI 876
IMAQ+GSFVPA+ AE+ ++D I+ R+GASD + G+STF+ E+ E + + + T +SL++
Sbjct: 669 IMAQMGSFVPAAEAEIGLVDRIFCRVGASDDLASGQSTFMVEVAETALAVHHATPRSLIL 728
Query: 877 VDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL 936
+DE+GRGTST DG+AIA A ++Y+ + L THY ++ + G + YH +
Sbjct: 729 LDEIGRGTSTFDGIAIARAVIEYIHDRIGARTLVSTHYHELTGLAATRPG-IRNYHARVV 787
Query: 937 TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ + +L+++ PG ++ S+G VA+LA LP + RA I A+L+
Sbjct: 788 -----------EEGDGIRFLWRIAPGGADRSYGINVARLAGLPVEIVERAKAILAELDRR 836
Query: 997 VSSR 1000
R
Sbjct: 837 AGPR 840
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 46/219 (21%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTASIPTF 148
+Q E K +YPD +L +G + FG+DA +AA++L I +P
Sbjct: 3 RQYREWKERYPDCILFFRLGDFYEMFGDDARLAARILDITLTSRETAKGERVPMCGVPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGL-----SALYTKATLEAAE 203
++ ++ RLV AG++V + +Q E + RGL + T TL +A
Sbjct: 63 AVDQYLPRLVEAGYRVAICEQVEDPRL-----------ARGLVRREVVRVVTPGTLWSA- 110
Query: 204 DVGGGEDGCGGESNYLVCV-VDDDGNVGKIRNGVF------GDGFDVR--------LGVV 248
G D ES Y+ + +D D NG G G + LG+
Sbjct: 111 ---AGRD----ESRYVAALALDPDPATRPAGNGRVPAPQPAGSGLETGSAAGAPRVLGLA 163
Query: 249 AVEISTGDVVYGEF-NDGFLRSGLEAVLLSLSPAELLLG 286
++STG+ + D LR L+ L L AE LLG
Sbjct: 164 YADVSTGEFTIAQLAGDDPLRLALDE-LARLQAAECLLG 201
>gi|323135795|ref|ZP_08070878.1| DNA mismatch repair protein MutS [Methylocystis sp. ATCC 49242]
gi|322398886|gb|EFY01405.1| DNA mismatch repair protein MutS [Methylocystis sp. ATCC 49242]
Length = 890
Score = 272 bits (696), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 256/936 (27%), Positives = 421/936 (44%), Gaps = 150/936 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
+ TP+ Q +E+K D LL +G + F +DA+ AA+ LGI HL +
Sbjct: 19 RATPMIAQYIEIKAANADCLLFYRMGDFYELFFDDAQTAARALGIMLTKRGKHLGEDIPM 78
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+P R N ++++L+ GF+V V +Q E A +A G R + L T T+
Sbjct: 79 CGVPVERANDYLQKLIALGFRVAVCEQIEDPA-EAKKRGAKSVVRRDVVRLVTPGTIT-- 135
Query: 203 EDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
ED +N V +IR G R G+ +V+ISTG
Sbjct: 136 ------EDALLDPARANAFAAV-------SRIRGADGG----WRYGLASVDISTGAFTVS 178
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ + S L + L L P E++ + L + + ++ +AG + V +G
Sbjct: 179 DCAE----SELASTLARLEPCEIVAAEALCRD-DHVVAVFAGVGAPV--------APLGR 225
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A L + G TL+ G ++ +++ A A+
Sbjct: 226 EAGDAPRRLQDFYGVATLAGF------------------GALSEAEISAAATAILYVERT 267
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
Q G + S R S + + A T LE+ R S G+ G+LL +++ T+T G
Sbjct: 268 QKGSRPALARPMSLRE---SATLDIDAATRANLELSRTLS-GAREGSLLSVVDLTVTSAG 323
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+RL+ + P D LI AR DAV+ E N D
Sbjct: 324 ARLMAERLAAPSTDPALIGARHDAVAFFLE-----------------NPD---------- 356
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
I S++ L R+PD+ R ++R+ + P + +A + A L A + + +L
Sbjct: 357 IRSALRAKLARAPDLARAVSRLSLQRGGPRD-LASVGAALTAARDVAEL----------- 404
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ-----GDLLNLM-----IISN 610
A +P I + +L+T + A + GD + L I
Sbjct: 405 ------------FARAGAPGEIARDVAMLATADAALAHEIARSLGDSVPLDRRGGDFIRE 452
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN-----FK 665
G+ +E+ AR ++ + SL + Q G + L+ + + + +ELPA +
Sbjct: 453 GRDAELDEARSLRDESRHVIASLQSRYADQTGTK-LKIKHNNFLGYFLELPAAQGEKLLR 511
Query: 666 VPLN--WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
P + + + +R+ + E++ ++A A + A +D+ + E
Sbjct: 512 PPFDQTFTHRQTMADAMRFSTRELVELQSRIASAADRALARELALFDALAAQILSRTDEL 571
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN---F 780
Q Q A LD L ALA ++ + + RP+ DH + I GRHPV++ L F
Sbjct: 572 QNLAQGFARLDVLSALAEVAEKRGWTRPLV--DHS-LDFAIIGGRHPVVEASLEAQGKAF 628
Query: 781 VPNDTNLHAERE-YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
ND +L ++ ++TGPNM GKS ++RQ A+I ++AQ GSFVPA A + V+D ++
Sbjct: 629 AANDCDLSGDKAGRIAVVTGPNMAGKSTFLRQNAVIALLAQAGSFVPAREARIGVVDRLF 688
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
+R+GASD + +GRSTF+ E+ E + IL T +SLVI+DE+GRGT+T DG++IA+AT+++
Sbjct: 689 SRVGASDDLARGRSTFMVEMVETAAILNCATPRSLVILDEIGRGTATFDGLSIAWATIEH 748
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
L E + +F TH+ ++ + + V +T H +V +L++V
Sbjct: 749 LHEVNRSRAIFATHFHELTQLSKRMARLVNL--TMKVTDHA----------GEVVFLHEV 796
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
V G ++ S+G VAQLA LP S +SRA I A LEA
Sbjct: 797 VKGAADRSYGVHVAQLAGLPASVVSRAHAILADLEA 832
>gi|395240975|ref|ZP_10417997.1| DNA mismatch repair protein mutS [Lactobacillus gigeriorum CRBIP
24.85]
gi|394475483|emb|CCI87974.1| DNA mismatch repair protein mutS [Lactobacillus gigeriorum CRBIP
24.85]
Length = 868
Score = 272 bits (696), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 264/977 (27%), Positives = 445/977 (45%), Gaps = 153/977 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TP+ +Q E+K +YPD L VG + F +DA A++L + N A
Sbjct: 7 TPMMEQYYEIKKQYPDAFLFYRVGDFYELFEDDAVKGAQLLELTLTHRSNKSENPVPMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P ++ +V LV G+KV + +Q E P KA G RG+ L T T+ +
Sbjct: 67 VPHHAVDTYVNTLVEKGYKVAICEQLE-------DPKKAQGMVKRGIVQLITPGTMMSE- 118
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
G E + NYL VV GF G+ ++STG+V Y
Sbjct: 119 --GPNE---AKDFNYLTSVVST------------ASGF----GLAYSDLSTGEV-YATHL 156
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
F S + LLSL E++ L+ + +K L A + VE +
Sbjct: 157 KSF--SAIANELLSLHTKEVVFTGDLT-EDQKEYLHKANIIVSQAVELDEKH-------- 205
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
AE+ + +N L N + + A E +++ LA Q +L HL+
Sbjct: 206 AEISYVEQN-----LVNRSE-----------KLATEQLVSYL-LATQKRSLA--HLQ--- 243
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQ-LEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
+ S+ ++ ++MT +T+Q LE++ + G + G+L +++ T T G+R
Sbjct: 244 ------IAKSYE-VNQYLQMT---HTVQNNLELVASAKTGKKMGSLFWVIDQTHTAMGAR 293
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LL++W+ PL + IS R + V + + Y+
Sbjct: 294 LLKQWLARPLLNYEQISYRQEMVQALLDE---------------------------YFTR 326
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
+V+ SL D++R RI E + + +++ LQ L K +K
Sbjct: 327 ETVIDSLKGVYDLERLTGRISFGNVNARELLQLARSLNSVPAILQALTDSNNDVLKNFAK 386
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA---ADQGDLLNLMIISNGQFSEVARA 619
++ + G A ++ ST+ + +G L I G S++ R
Sbjct: 387 EINP--------------LTGVAEQITSTIVADPPVLTTEGGL-----IQTGVNSQLDRY 427
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLN-WAKVNST 676
R A+ + K+ L + R + G+ NL+ + V G + KVPL+ + + +
Sbjct: 428 RDAMNNGKKWLAEMEADERAKTGIDNLKVGYNKVFGYYIQVSNGNKNKVPLDRFTRKQTL 487
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
RY +PE+ + + A T + + + E Y E Q LAALD
Sbjct: 488 TNAERYITPELKEHENLIMEAQTRSTDLEHGIFVNLRDEIKKYIPELQKLGGQLAALDIF 547
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQ 795
A ++ N+ RP+F I + +GRHPV++ ++ +++PND + E
Sbjct: 548 AGFAQVAEQNNYCRPIFHRGRH--DIKVVAGRHPVVEKVMPAGSYIPNDIEMD-EDTNIY 604
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNM GKS Y+RQ+ALI +MAQVGSFVPA AEL + D I+TR+GA+D + G+STF
Sbjct: 605 LITGPNMSGKSTYMRQMALIAVMAQVGSFVPADEAELPIFDQIFTRIGAADDLISGQSTF 664
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
+ E++EA+ L+ T +SLV+ DE+GRGT+T+DG+A+A A + YL + LF TH+
Sbjct: 665 MVEMSEANEALQYATNRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKTLFATHFH 724
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ ++T + HV ++ + + +L+K++PG ++ S+G VAQL
Sbjct: 725 ELTGLETSLI-KLKNIHVG-----------ATEENGKLIFLHKILPGPADQSYGIHVAQL 772
Query: 976 AQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLG 1035
A LP + A + +LEA+ +S + S + +L D+ + Q++ P E
Sbjct: 773 AGLPNKVLREAEKLLKRLEAQGASELTQASEQLNLFATSVDETEPLQKDAPAKHE----- 827
Query: 1036 RVEASEDLISAYRDLFL 1052
EA ++++ A +++L
Sbjct: 828 LTEAEQNVLQALSEVYL 844
>gi|332291445|ref|YP_004430054.1| DNA mismatch repair protein MutS [Krokinobacter sp. 4H-3-7-5]
gi|332169531|gb|AEE18786.1| DNA mismatch repair protein MutS [Krokinobacter sp. 4H-3-7-5]
Length = 863
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 254/917 (27%), Positives = 421/917 (45%), Gaps = 143/917 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASIPTFR 149
QQ +KTKYPD LL+ VG + FGEDA AA +L I +N A P
Sbjct: 2 QQYNGIKTKYPDALLLFRVGDFYETFGEDAVKAAAILNITLTSRNNGGDRTELAGFPHHS 61
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDVGGG 208
LN ++ +LV AG +V + Q E P + RG++ L T
Sbjct: 62 LNTYLPKLVKAGCRVAICDQLED-------PKQTKKIVKRGVTELVTPG----------- 103
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDV-RLGVVAVEISTGDVVYGEFNDGFL 267
++DD K N + F+ ++GV +++STG+ + + + ++
Sbjct: 104 ------------VAMNDDILSAKTNNFLGAVFFNKEKVGVAFLDVSTGEYLTAQGDIAYV 151
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
+ +L + +P+ELL+ + KQ + L AY E
Sbjct: 152 ----DKLLQNFAPSELLVCK---KQKKAFLEAYGSDYHTF---------------YQEDW 189
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
+ + ++L + D N H S EG++ A+ L T H Q + RI
Sbjct: 190 VFHIDYATESLHKHFDVNSLKGFGVEHLS--EGVV-AAGAALHYLGETQHHKLQH-ITRI 245
Query: 388 MCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRW 447
R ++ + + T++ LE L N+++G + TL+ I++ T + G RLL+RW
Sbjct: 246 -------RRIAADDYVWMDRFTIRNLE-LYNSASGVKAITLIDIIDKTTSAMGGRLLKRW 297
Query: 448 VTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLT 507
+ PL + I R D VS ++++ G+ I + +
Sbjct: 298 LALPLKRLDEIERRHDVVSFLSDN----------GE-----------------IFDKMQS 330
Query: 508 SLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLHIDGEYREKVTSKTLH 565
++ + D++R I+++ +P E I + ++ + K L L+ D E + +
Sbjct: 331 NIKKIGDLERLISKVATGKISPREVIQLKNSLEAIVPIKGLA-LNTDNESLNIIGEQLQD 389
Query: 566 SALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKA 622
+L+ I L +P I K I+ G +E+ R
Sbjct: 390 CVVLRDKIKETLKEEAPVSIIKGGA--------------------IAAGFHNELDELRVL 429
Query: 623 VQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKTI 680
Q K+ L+ ++ ++ G+ +L+ S + + IE+ KVP W + +
Sbjct: 430 SQGGKDYLEKMLARETERTGITSLKIASNNVFGYYIEVRNTHRDKVPEEWIRKQTLVNAE 489
Query: 681 RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA 740
RY + E+ ++ A E + + + + + + + + QA +A LDCL
Sbjct: 490 RYITEELKEYEGKILGAEERIQAIEQQLFAALVNWMSSFIPQVQANASQIAQLDCLLGFT 549
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQIIT 798
L+R N+VRP E I I GRHPV++ L + +V ND L + + +IT
Sbjct: 550 QLARENNYVRPTL---DESQAIDIKEGRHPVIEKQLPLGEAYVTNDVYLDSGDQQMIMIT 606
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNM GKS +RQ ALI ++AQ+GSFVPA +A + V+D I+TR+GASD+I G STF+ E
Sbjct: 607 GPNMSGKSAILRQTALIVLLAQMGSFVPAQAAHIGVVDKIFTRVGASDNISMGESTFMVE 666
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLFVTHYPKI 917
+NE + IL N + +SLV++DE+GRGTST+DG++IA+A ++L EH + LF THY ++
Sbjct: 667 MNETASILNNLSDRSLVLLDEIGRGTSTYDGISIAWAISEFLHEHPGRPKTLFATHYHEL 726
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
++ F + Y+VS + +V +L K+VPG S SFG VA++A
Sbjct: 727 NEMCETFE-RIKNYNVSV-----------KELKDNVLFLRKLVPGGSAHSFGIHVAKMAG 774
Query: 978 LPPSCISRATVIAAKLE 994
+P + RAT + KLE
Sbjct: 775 MPQQVLRRATKMMEKLE 791
>gi|67611475|ref|XP_667158.1| DNA repair protein [Cryptosporidium hominis TU502]
gi|54658270|gb|EAL36933.1| DNA repair protein [Cryptosporidium hominis]
Length = 1242
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 272/1018 (26%), Positives = 456/1018 (44%), Gaps = 149/1018 (14%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKK----YTPLEQQVVELKTKYPDVLLMIEVGYKFRF 118
P P P T I PSS + K+ +TP +Q ELK ++ D LL ++G +
Sbjct: 290 PLDPCYDPST---IWVPSSNSREAKEERMHFTPAMEQYWELKKEHFDKLLFFKMGKFYEL 346
Query: 119 FGEDAEMAAKVLGIYAHLDHNFMTAS------IPTFRLNVHVRRLVNAGFKVGVVKQTET 172
F DA + K H D + ++ P L+ + +LV G++V VV+Q ET
Sbjct: 347 FYIDAYICQK------HCDLRWTSSDSKPHVGFPETALHAYANKLVELGYRVVVVEQMET 400
Query: 173 AA-------IKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDD 225
+ G K R ++ ++T TL + ++ D
Sbjct: 401 PKELEERNRSASRGVKKDKAIKRSVNEVFTNGTLVRPD------------------MLSD 442
Query: 226 DGNVGKIRNGVFGDGFDV--RLGVVAVEISTGD---VVYGEFNDGFLRSGLEAVLLSLSP 280
++ D D+ +GVV V+I+TG + E D FL+ + ++ + P
Sbjct: 443 MASILMTLYFSKKDSEDLAYEIGVVCVDITTGKAELINIEEKGDQFLQ--VRTIVCQVQP 500
Query: 281 AELLL---GQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDT 337
E+ PLS +L Y RD A+ +++ +E +
Sbjct: 501 KEIAYLPGNMPLS------ILRYLSSIVPSIQLTNFRDFVDSVLAINDILETFEKL---- 550
Query: 338 LSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSL 397
N+ VPE NH + N AL+ T R+L L + + +F
Sbjct: 551 -------NVPVPEVVNH------LCNESKSLCCALSGTFRYLTTILLCDRLIMTGTFTEY 597
Query: 398 SGSMEMTLSANT--LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDR 455
S+ L N ++ LE+L++ +G E +L + HT+T G+RLL+RW+T+PL +
Sbjct: 598 DPSVSRHLIVNVGAIKDLELLQSQ-HGDEKNSLFGFLKHTITPGGTRLLKRWITYPLVNT 656
Query: 456 NLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDI 515
+ I+ RLD+V + ++ SE + E ++ +E + D
Sbjct: 657 DRINERLDSVKWLMDN------SEKLY---EFRDELRAIERSASSASRGSRKKYSQHLDF 707
Query: 516 QRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILT 575
+R I RI S + + +Y +Q+ + E V S L ++L+ +I
Sbjct: 708 ERLINRI------TSGVLQNKRGAVYFSNVVQR-----RFDEFVNSMNLFDSVLQCIIRV 756
Query: 576 ASSPAVIGKAAKLLSTVN--KEAADQGDLLNLM-----------IISNGQ--------FS 614
+ KLL+ + K+ + +G L N+ + SNG+
Sbjct: 757 FGDENLRKDMPKLLAALTGIKDESSEGFLENIFATTERLRSLVTLDSNGKDWIPVPGNCK 816
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWA 671
E +++ K D + KQ+ + F++ + + +E P + + P + A
Sbjct: 817 EYDDLLESINETKLCFDEELKRISKQMNTTAISFVN-NKYRYEVECPESIPKSRFP-DSA 874
Query: 672 KVNSTKK-TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
++ S+KK +R+H+ E+ + L E+L KEF + F ++
Sbjct: 875 EITSSKKGYVRFHTEEIKQLVYDLEYKEEQLEKSLFPYLHLMCKEFHSELSSFMGISDSI 934
Query: 731 AALDCLHALATLSRNKN---FVRPVFVDDHE----PVQIHICSGRHPVLDTILLDNFVPN 783
+ LD L +LA +S + + F +PVF+ E P+ + + RHPV+ L N++PN
Sbjct: 935 SQLDVLSSLALVSLDTSDGPFCKPVFLSKEETNGLPM-LELKESRHPVV-AKLKTNYIPN 992
Query: 784 DTNLH--AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
D L+ + C ++TGPNMGGKS +RQ + IMAQ+G +VPAS L +D I+TR
Sbjct: 993 DILLNGGSSPAPCSLVTGPNMGGKSTILRQTCISVIMAQIGCYVPASECRLTAVDKIFTR 1052
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA D I +G+STFL EL E + IL + + SLVI+DELGRGTST DG AI+ ATL+Y+
Sbjct: 1053 IGAYDLIIEGKSTFLVELEETADILNHSSEDSLVIIDELGRGTSTFDGTAISIATLEYIS 1112
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
KC LF TH + D + T V +H+ +++ + +T+LYK +
Sbjct: 1113 RVIKCRCLFSTHLHLLCDEFSNDT-KVLPFHMDLKLNNET---------RSITFLYKFIS 1162
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQ 1019
G+ S+G VAQLA +P I + +A +E+ + ++N S + LL+ + Q+
Sbjct: 1163 GICPKSYGMNVAQLAGIPQEVIDNSVALAKDVESS-TLLLRNISETKKLLMDVLSQDN 1219
>gi|350272990|ref|YP_004884298.1| DNA mismatch repair protein MutS [Oscillibacter valericigenes
Sjm18-20]
gi|348597832|dbj|BAL01793.1| DNA mismatch repair protein MutS [Oscillibacter valericigenes
Sjm18-20]
Length = 866
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 262/949 (27%), Positives = 427/949 (44%), Gaps = 183/949 (19%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAHLDHNFMTA----- 143
TP+ +Q +++K + PD +L +G + F DA A++ L + D + A
Sbjct: 5 TPMMKQYLKIKEQNPDSILFFRLGDFYEMFDTDARTASRELDLTLTSRDKDPNKAPEDRV 64
Query: 144 ---SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLE 200
IP + ++ RL+ G+KV + +Q E A G R + + T T+
Sbjct: 65 PMCGIPYHSSDAYIARLIAKGYKVAICEQMEDPATAK------GLVDRDIIRVVTPGTVI 118
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR-LGVVAVEISTGDVVY 259
+ C+ + GN + G FD R G +ISTG+
Sbjct: 119 DS-----------------ACLDEKSGNF------LCGIYFDARNAGAAFCDISTGETHV 155
Query: 260 GEFNDGFLRSGLEAVLLSL---SPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA-SRD 315
F+ R LE ++ L SPAE +L E+ L + R+E SR
Sbjct: 156 TSFSG---RDRLEHIVNELGRFSPAEAVLND--GAGAEERLREVMEEKFHCRMENGESR- 209
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
F+ G A + + + + ++L D P G +A+ L
Sbjct: 210 -FLPGEAEKNIRAQFGDAAWESLP------ADNPAAG--------------MALGGLLKY 248
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSAN-TLQQLEVLRNNSNGSEYGTLLHIMNH 434
+ ++ L I L + ME+ L+A L+ E LRN G+LL +++
Sbjct: 249 LYETQKTDLSHINKL--DYYEQGWFMELDLTARRNLELTETLRNKER---RGSLLWVLDK 303
Query: 435 TLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIV 494
T T G R LR W+ PL I+ R AV+ + ++ ++G+ +
Sbjct: 304 TKTSMGGRCLRGWLERPLLSVTAINKRNSAVAALVDN--------TIGREE--------- 346
Query: 495 EPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE 554
L + + LG D++R I RI + TA + A+ AI
Sbjct: 347 -------LCAAMNGLG---DLERLIGRITYGTAGGRDLAALRSAI--------------- 381
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM-------- 606
+RL PA+ + A KE DQ DLL +
Sbjct: 382 ---------------ERL------PAIADQLAAFSDRRLKELTDQLDLLQDVGELISSAI 420
Query: 607 ------------IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVS 652
I G +EV R R + K + ++ +++ G+R L+ F V
Sbjct: 421 CDEPPFSVREGGFIREGYDAEVDRLRGVMDGGKGLIANIEAQEKEKTGIRTLKVGFNKVF 480
Query: 653 GITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
G + IE+ + KVP + + +T RY + E+ ++ A+E + + +
Sbjct: 481 G--YYIEVSKSMIDKVPEGYVRKQTTVNGERYITQELKDLEHEILTASERVVALEYQLFT 538
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+ ++ Q A+A +D L +LA ++ + RP D E I I +GRHP
Sbjct: 539 NLREKIVAQAPRIQRTAAAVAEIDALDSLAAVAVRDGYCRP---DVDESGVIEITAGRHP 595
Query: 771 VLDTILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
V++ +L D+ FVPNDT + + + IITGPNM GKS Y+RQVALI ++AQ+GSFVPA++
Sbjct: 596 VVERVLKDSLFVPNDTFMGEKEQRVAIITGPNMAGKSTYMRQVALIVLLAQIGSFVPATA 655
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
A + V+D I+TR+GASD + G+STF+ E+ E + ILR+ T +SL+I+DE+GRGTST DG
Sbjct: 656 AHIGVVDRIFTRIGASDDLTAGQSTFMVEMTEVADILRHATKKSLLILDEIGRGTSTFDG 715
Query: 890 VAIAYATLDYLLEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
++IA A ++Y + KK LF THY ++ +++ G+V Y+++ T
Sbjct: 716 MSIARAVVEYCADPKKLGAKTLFATHYHELTELENTLPGTV-NYNIAVKTRG-------- 766
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+D+ +L K+VPG ++ S+G +VA+LA LP ++RA + +LE E
Sbjct: 767 ---EDIIFLRKIVPGGADRSYGIEVARLAGLPDKVVARARTVLEQLENE 812
>gi|91773655|ref|YP_566347.1| DNA mismatch repair protein MutS [Methanococcoides burtonii DSM
6242]
gi|121691668|sp|Q12VC9.1|MUTS_METBU RecName: Full=DNA mismatch repair protein MutS
gi|91712670|gb|ABE52597.1| DNA mismatch repair protein MutS [Methanococcoides burtonii DSM
6242]
Length = 887
Score = 272 bits (695), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 248/936 (26%), Positives = 428/936 (45%), Gaps = 152/936 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM- 141
K TP +Q + K ++ D L+ +G + FGEDA++ AK L I ++ M
Sbjct: 3 KLTPAMKQYYDAKKQHSDALIFFRMGDFYESFGEDAKIIAKELEITLTTRGKDIEGEKMP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A IP L+ ++ RL+ G+KV + +Q E P KA G RG+ + T T
Sbjct: 63 LAGIPYHALDNYLPRLIKKGYKVAICEQLED-------PKKAKGIIKRGVVRVVTPGT-- 113
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
A D D +NYL+ + DG+ GV +++STG+ +
Sbjct: 114 -AIDTSMFTDPS---NNYLMSISGGDGD----------------YGVSFLDVSTGEFLTT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+F D + + + P+E ++ + + L NV V+ + F
Sbjct: 154 QFADKSPYDRIASEAARMRPSECIISRTMFSDER---LVERLKELNVLVQGFKDEAF--- 207
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI--MNMPDLAVQA-----LA 373
+ D + + E+ + S +EG+ +P A A
Sbjct: 208 --------------------DVDSSRKLLERHFNVSTLEGMGCAGLPYATSSAGAALDYA 247
Query: 374 LTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
LT +++ G + + S S M L + TL+ LE+++N ++L +++
Sbjct: 248 LTT-QMRELGHV------SELSTYSDSEFMMLDSITLRNLEIVKNVRGEGNDTSILKVLD 300
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T T G RLL++W+ PL + + I RLDA+ +A ++++ + D
Sbjct: 301 DTNTPMGGRLLQKWLLKPLINVDSIDHRLDALECLA--------NDTMLRFD-------- 344
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID- 552
V + L DI+R I R+ + + + IA+ +++ + ++ + D
Sbjct: 345 -----------VRSHLSFVKDIERLIGRVVYGNSNARDLIALKRSLGSVPQIVESMGDDP 393
Query: 553 -GEYREKVTSKTLHSALLKRLI-----LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
E + L L+ ++ P V + ++ + E D+ L
Sbjct: 394 GCEMLINIRDGLLGFEQLENIVKLIDDAIVDEPPVSVREGGMIRSGYNEKLDE-----LK 448
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--F 664
+S G + +A ++ KE R + G+++L+ + IE+ +
Sbjct: 449 GMSTGGKTWIASFQQ-----KE---------RDRTGIKSLKVGYNRVFGYYIEITKSNIA 494
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
++P ++ + + + R+++PE+ D + A+E++T + + + ++ Q
Sbjct: 495 QIPDDYIRKQTMRNAERFYTPELKEWEDVILSADEKITALENELFTEITSRIASHASDLQ 554
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
+ LDC +LA ++ N NFVRP D +I I GRHPV++ + FVPND
Sbjct: 555 RIAVLIGQLDCTASLAEVAVNNNFVRPNITSD---CKILIREGRHPVVEKTVRGGFVPND 611
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T + E +ITGPNM GKS Y+RQV+LI IMAQ GSFVPAS A + ++D ++TR+GA
Sbjct: 612 TEMDCVDEQFLLITGPNMAGKSTYMRQVSLIVIMAQAGSFVPASHASIGIVDRVFTRVGA 671
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
D + G+STF+ E+ E + IL N T +SLV++DE+GRGTST+DG +IA A ++Y+ H
Sbjct: 672 FDDLASGQSTFMVEMVELANILNNATPKSLVLLDEIGRGTSTYDGYSIAKAVVEYI--HN 729
Query: 905 KCMV----LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
K V LF THY ++ +I + V YH++ + D+ +L K+V
Sbjct: 730 KGRVGVRSLFATHYHQLTNISSSLK-RVKNYHIAV-----------KEDGDDLVFLRKIV 777
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
PG ++ S+G VA+LA +P RA + +E E
Sbjct: 778 PGATDKSYGIHVARLAGVPHKVTQRAKEVLQDIEDE 813
>gi|449496462|ref|XP_002196049.2| PREDICTED: DNA mismatch repair protein Msh6 [Taeniopygia guttata]
Length = 1359
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 264/981 (26%), Positives = 442/981 (45%), Gaps = 137/981 (13%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K TP ++ +LK++ D ++ +VG + + DA LG+ + + + P
Sbjct: 406 KCTPGVRRWWQLKSQNFDAVICYKVGKFYELYHMDAVTGVNELGLI-FMKGTWAHSGFPE 464
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAI---KAHGPGKAGPFG----RGLSALYTKATLE 200
LV G+KV V+QTET + + G++ F R + + TK T
Sbjct: 465 TAFGRFSDVLVQKGYKVARVEQTETPEMMEARCKSKGQSTKFDKVVRREICRIITKGTQT 524
Query: 201 -AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
+ D E+ S +L+ V + + + G V+G V V+ S G
Sbjct: 525 YSVMDCDPSEN----HSKFLLSVKEKEDSAG---TRVYG--------VCFVDTSMGKFHV 569
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
G+F D S ++ +P ++L + LS T+K+L S ++ S F
Sbjct: 570 GQFPDDRHCSRFRTLVAHYTPVQVLFEKGNLSVDTQKIL--KGSLVSCIQEGLTSGSQFW 627
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD-----------L 367
+V+ L E ++ N + +P S I+ + + D L
Sbjct: 628 NASKTLKVL-LEEGYFKE--KQNSENGCSLP------SVIKSLTSESDSLGLTPGENSEL 678
Query: 368 AVQALALTIRHLKQFGLERIMCLGASF-----------RSLSGS-------MEMTLSANT 409
A+ AL + +LK+ +++ + A+F + +S S M L T
Sbjct: 679 ALSALGGCVFYLKRCLIDQELLSQANFEEYVPVDIATAKDMSSSSLFARTGQRMVLDGVT 738
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LEVL+N +NGS GTLL ++ T +G RLL++W+ PLC+ I+ RLDAV ++
Sbjct: 739 LMNLEVLQNGTNGSTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDL- 797
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
+ P +S V L + PD++R +++I H +P
Sbjct: 798 -----------------------LAVPD---KMSEVSEYLKKLPDLERLLSKI-HSIGSP 830
Query: 530 --SEFIAVMQAILYAGKQLQQLHI-------DG--------EYREKVTSKTLHSALLKRL 572
S+ +AI Y + + I +G E+ E+ S S +LK+L
Sbjct: 831 LKSQNHPDSRAIFYEELKYSKKKIADFLSTLEGFKIMNEIVEFMEEFASD-FKSRVLKQL 889
Query: 573 ILTASSPAVIGKAAKLLSTVNK--EAADQGDLLNLMIISN--GQFSEVARARKAVQSAKE 628
+ T + G+ L + + + A D +I+ G + RA + +++ +E
Sbjct: 890 V-TCKARNPDGRFPDLSAELTRWDTAFDHNQARKTGVITPKLGFDPDYDRALEDIRALEE 948
Query: 629 ELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKVNSTKKTIRYHSP 685
+L ++ RK LG +++++ + +E+P + +P + +S K RY +
Sbjct: 949 DLRRYLDKQRKLLGSKSVQYWGTGKNRYQMEIPESVISRNLPEEYELRSSRKGYKRYWTK 1008
Query: 686 EVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRN 745
E+ L + A E + F ++Q AV+ +A LD L +LA S+
Sbjct: 1009 EIEKMLAAMVNAEERRDAALKDCMRRLFYNFAKNSKDWQTAVECIAVLDVLMSLAHYSQG 1068
Query: 746 KN--FVRPVFV---DDHEPVQIHICSGRHPVL-DTILLDNFVPNDTNLHAERE------Y 793
+ RP + D+ P + + + RHP + T D+F+PND + + E
Sbjct: 1069 GDGPLCRPEILLPRDNARPF-LELRNSRHPCITKTFFGDDFIPNDIVIGIKDEGSSSEAS 1127
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
C ++TGPNMGGKS +RQ L+ +MAQ+G +VPA + L +D ++TR+GASD I G S
Sbjct: 1128 CVLVTGPNMGGKSTLMRQAGLLVVMAQLGCYVPAEACRLTPIDRVFTRLGASDRIMAGES 1187
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF EL+E S IL++ T SLV+VDELGRGT+T DG AIA A + L E +C LF TH
Sbjct: 1188 TFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVQELAERIQCRTLFSTH 1247
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y + + G+V H++ + ++ P S + +T+LYK + G S+GF A
Sbjct: 1248 YHSLVE-DYSHCGAVRLGHMACMVENESEDP----SQETITFLYKFIEGACPKSYGFNAA 1302
Query: 974 QLAQLPPSCISRATVIAAKLE 994
+LA +P I + A + E
Sbjct: 1303 RLADIPEEVIQKGHRKAKEFE 1323
>gi|384097475|ref|ZP_09998596.1| DNA mismatch repair protein MutS [Imtechella halotolerans K1]
gi|383837443|gb|EID76843.1| DNA mismatch repair protein MutS [Imtechella halotolerans K1]
Length = 856
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 256/962 (26%), Positives = 438/962 (45%), Gaps = 178/962 (18%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASIPTFR 149
+Q ++K KYPD LL+ +G + FGEDA AA VLGI +N A P
Sbjct: 2 KQYNQIKAKYPDALLLFRIGDFYETFGEDAIKAAGVLGIVLTHRNNGGDRTELAGFPHHS 61
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDVGGG 208
LN ++ +LV AG +V + Q E P + RG++ L T V
Sbjct: 62 LNTYLPKLVKAGMRVAICDQLE-------DPKQTKTIVKRGVTELITPG-------VALN 107
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D +N + + GK + G+ +++STG+ + + +
Sbjct: 108 DDILHARTNNFLAALWQ----GK-----------AQWGISFLDVSTGEFLTSQGTVEY-- 150
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG--GALAEV 326
++ +L + P+E+L+ + + K EC ++ F G L E
Sbjct: 151 --IDKLLQNFRPSEVLVPKKIKK------------------EC--KELFGDGFHTFLLED 188
Query: 327 MSLYENMGEDTLS----NNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
E+ +TL+ N + + EQ N A G A+ + +
Sbjct: 189 WVFQEDFAFETLTGHFKTNSLKGFGI-EQLNEGIATSG----------AILYYLSETQHH 237
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
LE I ++ + ++ + + T++ LE+ +S S TLL +++ TL+ G R
Sbjct: 238 KLEHI----STLQRIAEEDYVWMDRFTIRNLELY--HSQASNAVTLLDVIDKTLSPMGGR 291
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
+L+RW+ PL + I R + V+ + + H++ I
Sbjct: 292 MLKRWLALPLKNGIKIKQRHEVVTYLLD-------------HED--------------IH 324
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ-----------AILYAGKQLQQLHI 551
+ L + D++R I+++ P E + + AI + LQ+L
Sbjct: 325 KKIQHQLKQIGDLERLISKVATGKINPREVVQLKNSMSAISPVKAIAIASENEALQRLG- 383
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
E++ + L S+ +K + LT +P I K +I+ G
Sbjct: 384 -----ERLQNGELLSSRIKEM-LTEEAPVQIQKGN--------------------VIAPG 417
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLN 669
E+ R S K LD+++ ++ G+ +L+ S + + IE+ KVP +
Sbjct: 418 FSDELDELRNLSHSGKSYLDAMLERETERTGIPSLKIDSNNVFGYYIEVRNTHKEKVPND 477
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
W + + RY + E+ ++ A E++ ++ + ++ + GY + Q+
Sbjct: 478 WTRKQTLVNAERYITEELKEYEAKILGAEEKILVLEQQLFNELVGWLSGYIVQVQSNAVI 537
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNL 787
+A LDCL A L+++ +V P F + +E + I GRHPV++ L +V ND L
Sbjct: 538 MAQLDCLCGFAQLAKDNKYVCPKFSEGYE---LDIKQGRHPVIEKQLPVGTPYVANDVYL 594
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA + L V+D ++TR+GASD+
Sbjct: 595 DRDSQQMIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAQAVTLGVVDKLFTRVGASDN 654
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKC 906
I G STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL EH +
Sbjct: 655 ISMGESTFMVEMNETASILNNISERSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPARP 714
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ ++ F + ++VS ++ +V +L K+V G SE
Sbjct: 715 KTLFATHYHELNEMTETF-DRIKNFNVSI-----------KETKDNVLFLRKLVSGGSEH 762
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMP 1026
SFG VA++A +P +++A I KLE SS +L+D+ + AQ M
Sbjct: 763 SFGIHVAKMAGMPQQVLAKANKILKKLEKSHSSE------------ELTDKLKTAQNEMQ 810
Query: 1027 VS 1028
+S
Sbjct: 811 LS 812
>gi|336477855|ref|YP_004616996.1| DNA mismatch repair protein MutS [Methanosalsum zhilinae DSM 4017]
gi|335931236|gb|AEH61777.1| DNA mismatch repair protein MutS [Methanosalsum zhilinae DSM 4017]
Length = 881
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 324/647 (50%), Gaps = 68/647 (10%)
Query: 393 SFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPL 452
+ R+ S S M L + TL+ LEV+RN + T+L +++ T+T GSR+L++W+ PL
Sbjct: 260 TLRTYSDSDFMILDSITLRNLEVVRNVRGEGKSATILGVLDDTMTPMGSRILQKWILKPL 319
Query: 453 CDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRS 512
+ I+ RLDAV E T ++ ++D + + L R
Sbjct: 320 ISTSDINKRLDAVEEF--------THNTLLRYD-------------------IRSHLSRV 352
Query: 513 PDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH--IDGEYREKVTSKTLHSALLK 570
DI+R RI + + + +A+ ++ L A +++ L +D E +T + + L+
Sbjct: 353 RDIERLTGRIVYGNSNARDLVALKKS-LEAVPEIRSLQKEMDSEMIVSLTGQLYDFSQLE 411
Query: 571 RLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEEL 630
LI V + D G +I +G +E+ R + KE +
Sbjct: 412 SLIDLIDCGIVDEPPVSV--------RDGG------LIKSGYSTELDEIRGMSRHGKEWI 457
Query: 631 DSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVL 688
S R++ G+++L+ + V G + + +VP ++ + + R+++PE+
Sbjct: 458 ASFQKRERERTGIKSLKVGYNKVFGYYIEVTKANSSQVPEDYIIKQTMANSERFYTPELK 517
Query: 689 TALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNF 748
+ + A+E++T + + + Y + Q + +D L LA ++ N+N+
Sbjct: 518 KWEEAIISADEKITTLEYELFSEINSKISDYSKQLQKTADVIGKMDVLSNLAEIAVNRNY 577
Query: 749 VRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCY 808
RP D +I + GRHPV+++ + FVPNDT + + +ITGPNM GKS Y
Sbjct: 578 TRPAVTAD---CRILVRDGRHPVVESSVPGGFVPNDTEMDCSKNQFALITGPNMAGKSTY 634
Query: 809 IRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRN 868
+RQVALI IMAQ GSFVPAS A + ++D I+TR+GA D + G+STF+ E+ E + IL N
Sbjct: 635 MRQVALIVIMAQAGSFVPASHASIGLVDRIFTRVGAFDDLASGQSTFMVEMVELANILNN 694
Query: 869 CTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV--LFVTHYPKIADIKTKFTG 926
T +SL+++DE+GRGTST+DG +IA A ++Y+ + V +F THY ++ D+ +
Sbjct: 695 ATPKSLILLDEIGRGTSTYDGYSIAKAVVEYIHNKDRAGVRSMFATHYHQLTDLSERLE- 753
Query: 927 SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRA 986
V YH++ + D+ +L K++PG ++ S+G VA+LA +P RA
Sbjct: 754 RVNNYHIAV-----------REEGDDLVFLRKIIPGATDKSYGIHVARLAGVPRRVTQRA 802
Query: 987 TVIAAKLEAEVS-----SRVQNRSAKRDLLVKLSDQEQEAQENMPVS 1028
I +E E S + + RS L+ + ++ Q PV+
Sbjct: 803 KEILEGIENESSLGEKDNATRKRSGYTQLIFDIDRSSRKPQMYDPVA 849
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 86/210 (40%), Gaps = 34/210 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------AHLDHNFM 141
K TP Q + K +Y D ++ +G + F +DA+ ++ L I
Sbjct: 3 KLTPAMSQYYQFKKEYSDCIIFFRMGDFYETFDQDAKTVSRELDITLTSRGKGKSGEKMP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A IP ++ ++ RL+ G+KV + +Q E P KA G + T
Sbjct: 63 LAGIPYHSIDNYLPRLIKKGYKVAICEQLE-------DPKKA--KGVVKRGVVRVVTPGT 113
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
A D E+ +NYL+ + G+G D G+ ++STG+ + +
Sbjct: 114 AIDSSMFENAA---NNYLMAIS--------------GNGND--FGLSFFDVSTGEFLTTQ 154
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSK 291
F+D + + +SPAE ++ L++
Sbjct: 155 FSDSPPYDRVAGEVARMSPAECIICPSLAE 184
>gi|260587680|ref|ZP_05853593.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
gi|331084031|ref|ZP_08333138.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541945|gb|EEX22514.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
gi|330402393|gb|EGG81963.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
6_1_63FAA]
Length = 904
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 249/945 (26%), Positives = 426/945 (45%), Gaps = 165/945 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ Q V+ K +Y D +L +G + F EDAE+ +K L G +
Sbjct: 27 SPMMQHYVKTKEEYKDCILFYRLGDFYEMFFEDAEIVSKELELTLTGKDCGMSERAPMCG 86
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTET----------AAIKAHGPGKAGPFGRGLSALY 194
IP V++ RL++ G+KV + +Q E I+ PG + L
Sbjct: 87 IPFHAAEVYLNRLISKGYKVAICEQMEDPKQTKGIVRREVIRVVTPG---------TTLN 137
Query: 195 TKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIST 254
T+A E ++NY++ VV + N R G+ +I+T
Sbjct: 138 TQALDET-------------KNNYIMSVV-------YVSN---------RFGIAIADITT 168
Query: 255 GDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASR 314
G + E ++ +R L+ + SPAEL+ + + S + ++
Sbjct: 169 GVFMVTEVDE--IRKLLDEIY-KFSPAELVCNEAFT-------------MSGIEIDELKN 212
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI----MNMPDLAVQ 370
I AL D ++D ++ H +EG+ N +A
Sbjct: 213 RLNISLSAL------------DNWYFDDDLCARTLKEHFHVGTLEGLGLKDYNCAVIAAG 260
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
AL + ++ +E + S M + ++T + LE+ + G+LL
Sbjct: 261 ALFTYLLETQKNSMEHL----RQITPYSTDKYMLIDSSTRRNLELTETMREKVKRGSLLW 316
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++ T T G+R++R ++ PL D I+ARLDAV EI H+ +
Sbjct: 317 VLDKTKTAMGARMMRSFIEQPLIDEGEINARLDAVEEI-------------NCHEMDREE 363
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQ 547
+ Y D++R I+R+ +++A P + I+ + I Y + L
Sbjct: 364 IREYLSPVY--------------DMERLISRVSYQSANPRDLISFKSSISMIPYIRQLLS 409
Query: 548 QLH---IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
Q + Y E + L+ L ++ P + A +G
Sbjct: 410 QFQCEELQKVYEEMDDLQDLYQLLEASIV---DEPPL--------------AMKEGG--- 449
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
II G ++ R+A K L L +++ G+R L+ + +E+ +F
Sbjct: 450 --IIKEGYQEDIDHFREAKTKGKVWLAELEAEEKEKTGIRTLKIKYNKVFGYYLEVTNSF 507
Query: 665 K--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
K VP + + + RY +P + D + A ++L + A+ S +
Sbjct: 508 KDMVPDYYTRKQTLTNAERYITPRLKELEDMILGAEDKLYALEYEAFVSIRTKIAAEVER 567
Query: 723 FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFV 781
Q +A+A LD +LA ++ FVRP + I I +GRHPV++ ++ D F+
Sbjct: 568 IQKTARAIAKLDAYASLALVASRNQFVRPKI---NTKGVIDIKNGRHPVVEKMISNDMFI 624
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PNDT L + +ITGPNM GKS Y+RQ ALI +MAQ+GSFVPA A + ++D I+TR
Sbjct: 625 PNDTYLDNGKNRVAVITGPNMAGKSTYMRQSALIVLMAQIGSFVPAEKANIGIVDRIFTR 684
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD + G+STF+ E+ E + ILRN T++SL+I+DE+GRGTST DG++IA+A ++++
Sbjct: 685 VGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVIEHIS 744
Query: 902 EHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
+ LF THY ++ +++ K G V Y ++ + + D D+ +L K+
Sbjct: 745 NTRILGAKTLFATHYHELTELEGKLAG-VNNYCIA----------VKERGD-DIVFLRKI 792
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQN 1003
V G ++ S+G +VA+LA +P S I RA + +L A++++ V+N
Sbjct: 793 VKGGADKSYGIQVAKLAGVPNSVIERAKELVEELVSADITATVKN 837
>gi|402304543|ref|ZP_10823611.1| DNA mismatch repair protein MutS [Haemophilus sputorum HK 2154]
gi|400377626|gb|EJP30500.1| DNA mismatch repair protein MutS [Haemophilus sputorum HK 2154]
Length = 872
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 196/632 (31%), Positives = 321/632 (50%), Gaps = 77/632 (12%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ +N + G+E TL +++ +T GSRLL+RW+ P+ D N + R D
Sbjct: 268 LDAATRRNLELTQNLAGGTE-ATLAAVLDKCVTPMGSRLLKRWIHQPIRDLNKLQKRQDV 326
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
++ + ES ++ S+ L + D++R + R+
Sbjct: 327 IATLQESG----------------------------LIESLQPCLQQVGDMERILARVAL 358
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
R+A P + + A L Q+ I Y + T+ + + A +
Sbjct: 359 RSARPRDLTRLRTA-------LAQIPILVNYAQNQTACLVQTM------------AQLAD 399
Query: 585 AAKLLSTVNKEAADQGDLL--NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
++L S + + D L + +I+ G +E+ R+ A + L+ L R+ G
Sbjct: 400 FSELQSLLERAIIDNPPQLIRDGGVIAEGYHAELDEWRQLSAGATQYLEQLEIRERESTG 459
Query: 643 MRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
+ L+ F +V G I K P+++ + + K RY PE+ T D++ A
Sbjct: 460 IDTLKIGFNAVHGYYIQISQGQAHKAPIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGA 519
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV 760
+ + +D+ + AE Q A LA LD L LA ++ N+VRP+F
Sbjct: 520 SLALEKQLYDALFDAIMPHLAELQLAAMVLAELDVLTNLAERAQTLNYVRPMFSPQR--- 576
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
+ I GRHPV++ ++ D F+ N L+A+R + I+TGPNMGGKS Y+RQ+ALI +MA
Sbjct: 577 GVQIKGGRHPVVEQMISDPFIANPVYLNAQR-HLLIVTGPNMGGKSTYMRQIALICLMAY 635
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+GSFVPA SAE+ +LD I+TR+GASD + GRSTF+ E+ E + IL TAQSLV++DE+
Sbjct: 636 IGSFVPAESAEIGMLDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLVLIDEI 695
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTST+DG+++A+A ++L + + + LF THY ++ + ++ G V H
Sbjct: 696 GRGTSTYDGLSLAWACAEWLAKKTQSLTLFATHYFELTSLPSQLKG-VANVH-------- 746
Query: 941 VMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
+D++ D + +++ V G + S+G VA LA +P I+ A A LE E+S+
Sbjct: 747 ----LDAREHNDTIVFMHSVQEGAASKSYGLAVAALAGVPKPVITMAKQRLAHLE-ELSA 801
Query: 1000 RVQ--NRSAKRDLLVKLSDQEQEAQENMPVSP 1029
+ + N S + DLL E +Q + +SP
Sbjct: 802 QTRNVNDSPQADLLFA----EPISQNSAEISP 829
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ ++LK ++PD+LL +G + F +DA+ AA +L I A A
Sbjct: 9 HTPMMQQYLQLKAQHPDILLFYRMGDFYELFYDDAKRAAVLLDISLTKRGASAGEPIPMA 68
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGLSALYTKATL 199
+P + ++ +LV G V + +Q + AA K GP R + + T T+
Sbjct: 69 GVPYHAVEGYLAKLVALGESVAICEQIGDPAAAK-------GPVERKVVRIVTPGTV 118
>gi|392562069|gb|EIW55250.1| DNA mismatch repair protein Msh6 [Trametes versicolor FP-101664 SS1]
Length = 1247
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 272/986 (27%), Positives = 419/986 (42%), Gaps = 116/986 (11%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGED 122
P +P P TL IP P + T+ +TP E+Q E+K + D +L + G + ED
Sbjct: 305 PGQPGYDPRTLY-IP-PRAWTS----FTPFEKQFWEIKQNHFDTILFFQKGKFLELYEED 358
Query: 123 AEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA--------A 174
A + + + +P N + + G+KVG V Q ETA A
Sbjct: 359 ARVGHREFDLKLTQRVKMSMVGVPEMSFNFWAAKFLAKGYKVGRVDQAETALGAEMRLAA 418
Query: 175 IK------AHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDG-CGGESNYLVCVVDDDG 227
K A GK R L+ +YT TL E + + G C D DG
Sbjct: 419 DKKNKKEPAKDKGKDKIVRRELNKVYTNGTLVDEELLTDEQAGHCVSIREEEAVETDKDG 478
Query: 228 NVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ 287
G+ ++ +T + F D R+ LE ++ L P E++ +
Sbjct: 479 KQT--------------FGICVLDSATSEFNLSAFEDDICRTKLETMMRQLRPKEIIFTK 524
Query: 288 -PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLY--ENMGEDTLSNNEDQ 344
LS T ++L + P + + + F A+ E+ LY + ++ N
Sbjct: 525 GNLSVSTTRLLKSIL-PGNCLWTSLRESEGFKYNEAIKELKKLYPADEDDDEMADNPHGL 583
Query: 345 NMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSM 401
VPE +G A+QAL I +L +++ + +F +
Sbjct: 584 TKAVPEPIRRMLPHQG-------AIQALGSMIWYLHTLNIDKDILSMKNFNVYDPMKRGQ 636
Query: 402 EMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISAR 461
+ L TL +EVL+NN G+E GTLL ++ +T G RL R W+ PL + I+AR
Sbjct: 637 GLVLDGQTLAHVEVLQNN-EGTEEGTLLKLLGRCITPSGKRLFRIWLCMPLREVKDINAR 695
Query: 462 LDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITR 521
LDAV ++ E P F +++ L PD++R ++R
Sbjct: 696 LDAVQDLLE------------------------HPTFEKDFTAIAKGL---PDLERIVSR 728
Query: 522 IFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAV 581
I + +FI V+ A K L L T+ + S + L+ TA
Sbjct: 729 IHAKNCKVKDFIKVLGAFRSLSKGLSALA--------ETADSFDSKSIPGLLRTAPDLTP 780
Query: 582 IGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQL 641
K + + + +D+ + +G+ + + + EL S + RKQ
Sbjct: 781 NLKHIQAMFKPPESGSDE------LCPEDGKDEVYDGIMEEINELENELKSELKKLRKQT 834
Query: 642 GMRNLEFMSVSGIT--HLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
G+ + S G +L++ K P W STK R+ P + T + ++ A
Sbjct: 835 GLDLTYWHSAQGTKEIYLVQTQGKERDKAPKGWTLSGSTKAAKRFIVPALQTTIRKVKEA 894
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVD 755
E + + EF + + A++ LA LDCL +LA S + RP V+
Sbjct: 895 RENRNTAIKEFKNRLYAEFDLDRSVWLRAIRVLAELDCLFSLAKASSALGEPACRPELVE 954
Query: 756 DHEPVQIHICSGRHPVL--DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
E I RHP L L +F+PN+ L E ++TG GKS +R A
Sbjct: 955 GDEAF-IEFEDLRHPALCASGSLKGDFIPNNVKLGGEVGKIALLTGT---GKSTAMRMTA 1010
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
IMAQ+G VPA+ A L +D I TRMGA D++ STF EL+E ILR+ T +S
Sbjct: 1011 AGIIMAQLGMLVPAAKARLCPVDSILTRMGAYDNMFSNASTFKVELDECCKILRDATPKS 1070
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHV 933
VI+DELGRGTST+DG+AIA A L L H + F THY + D F YH
Sbjct: 1071 FVILDELGRGTSTYDGMAIAAAVLHELATHTLSLSFFATHYGSLTD---DF-----AYHP 1122
Query: 934 SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
+ H M + +++ +LYK+V GV+ SSFG VA LA +P + + RA V++
Sbjct: 1123 NIRNMH--MQTLVDDEKRELVFLYKLVEGVASSSFGTHVANLAGVPLAVVERAEVVSRDF 1180
Query: 994 EAEVSSRVQ---NRSAKRDLLVKLSD 1016
+V+ N++A R +V +D
Sbjct: 1181 AKHFQEKVEGKKNKAAGRLPIVAQAD 1206
>gi|397169655|ref|ZP_10493087.1| DNA mismatch repair protein MutS [Alishewanella aestuarii B11]
gi|396088959|gb|EJI86537.1| DNA mismatch repair protein MutS [Alishewanella aestuarii B11]
Length = 853
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 259/931 (27%), Positives = 417/931 (44%), Gaps = 147/931 (15%)
Query: 79 PSSQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--- 133
PS Q +TP+ QQ + LK+++P +LL +G + F EDA+ AA +L I
Sbjct: 2 PSDQKPEQALSNHTPMMQQYLALKSQHPQILLFYRMGDFYELFYEDAKKAAALLDISLTK 61
Query: 134 --AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS 191
A +P + ++ RLV G V + +Q A GP R +
Sbjct: 62 RGQSAGEPIPMAGVPYHAVEGYLARLVQLGESVAICEQIGDPATSK------GPVERKVV 115
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
+ T T+ + +D L+C + + + G+ ++
Sbjct: 116 RIVTPGTVTDEALLNERQDN-------LLCAISESRS---------------HFGLAQLD 153
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
+++G + + + L A+L L+PAELL + ++ P R
Sbjct: 154 LTSGRFLLNQVSHA---DDLAALLQRLNPAELLYPE-----------NFSLPHLTERKGA 199
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
R + A AE + L + G L Q+ V E A +M +A
Sbjct: 200 RRRPVWEFELASAERL-LCQQFGTRDL-----QSFGVLEAPVALMAAGCLMQYVKDTQRA 253
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+ HL+ LER F + L A T + LE+ S +E+ TL +
Sbjct: 254 ---QLPHLRSIALER----PDDF--------IVLDAATRRNLELTHTLSGQTEH-TLAAV 297
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T T GSRLL+RW+ PL + ++ RLDAV E+ E D
Sbjct: 298 LDKTQTAMGSRLLKRWIHAPLRNHTQLNQRLDAVQELTE-------------------DF 338
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-H 550
++P SL + DI+R + R+ R+A P +F + QA+ + QQL H
Sbjct: 339 QALQP-----------SLKQIGDIERILARLALRSARPRDFARLRQALTELPELQQQLLH 387
Query: 551 IDGEYREKVTSKTLH----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
+ + ++ TL + LL+R I+ SP V+ + D G
Sbjct: 388 ANSQLLQQHQQATLPVPELAELLQRAIV--ESPPVLIR-------------DGG------ 426
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF 664
+I+ G +E+ R + A + L L R++ G+ +L+ F + G A+
Sbjct: 427 VIAPGYHAELDEWRALAEGATDYLQQLELRERERTGISSLKVGFNKIHGFYIETGRSADT 486
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
+VP + + + K RY PE+ D++ + + + + +D+ Y A+ Q
Sbjct: 487 RVPPEYVRRQTLKNNERYIIPELKEYEDKVLGSQSKALTLEKQLYDALFDAVSPYLAQLQ 546
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
QAL+ LD L + A + + RP+ E + I + RHPV++ +L F+ N
Sbjct: 547 QLAQALSELDVLCSFAECAVLYQYCRPLLT---EQIGIQLTQARHPVVERVLKAPFIANP 603
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
L A R +ITGPNMGGKS Y+RQ ALI +MA +GSFVPA A + +D I+TR+GA
Sbjct: 604 LQLDASRRML-MITGPNMGGKSTYMRQTALIALMAAIGSFVPAKQAVIGPIDRIFTRIGA 662
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
SD + GRSTF+ E+ E + IL + TAQSLV++DE+GRGTST+DG+++A+A DYL
Sbjct: 663 SDDLASGRSTFMVEMTETATILHHATAQSLVLMDEIGRGTSTYDGLSLAWACADYLANQL 722
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGV 963
+ + LF THY ++ + + +V H +D+ D + +++ V G
Sbjct: 723 QALTLFATHYFELTSLAQQLP-AVANVH------------LDAVEHGDGIVFMHHVQEGA 769
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ SFG +VAQLA +P I A +LE
Sbjct: 770 ASKSFGLQVAQLAGVPRPVIQLARQKLRQLE 800
>gi|359299401|ref|ZP_09185240.1| DNA mismatch repair protein MutS [Haemophilus [parainfluenzae] CCUG
13788]
Length = 860
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 196/632 (31%), Positives = 321/632 (50%), Gaps = 77/632 (12%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ +N + G+E TL +++ +T GSRLL+RW+ P+ D N + R D
Sbjct: 257 LDAATRRNLELTQNLAGGTE-ATLAAVLDKCVTPMGSRLLKRWIHQPIRDLNKLQKRQDV 315
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
++ + ES ++ S+ L + D++R + R+
Sbjct: 316 IATLQESG----------------------------LIESLQPCLQQVGDMERILARVAL 347
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
R+A P + + A L Q+ I Y + T+ + + A +
Sbjct: 348 RSARPRDLTRLRTA-------LAQIPILVNYAQNQTACLVQTM------------AQLAD 388
Query: 585 AAKLLSTVNKEAADQGDLL--NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
++L S + + D L + +I+ G +E+ R+ A + L+ L R+ G
Sbjct: 389 FSELQSLLERAIIDNPPQLIRDGGVIAEGYHAELDEWRQLSAGATQYLEQLEIRERESTG 448
Query: 643 MRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
+ L+ F +V G I K P+++ + + K RY PE+ T D++ A
Sbjct: 449 IDTLKIGFNAVHGYYIQISQGQAHKAPIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGA 508
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV 760
+ + +D+ + AE Q A LA LD L LA ++ N+VRP+F
Sbjct: 509 SLALEKQLYDALFDAIMPHLAELQLAAMVLAELDVLTNLAERAQTLNYVRPMFSPQR--- 565
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
+ I GRHPV++ ++ D F+ N L+A+R + I+TGPNMGGKS Y+RQ+ALI +MA
Sbjct: 566 GVQIKGGRHPVVEQMISDPFIANPVYLNAQR-HLLIVTGPNMGGKSTYMRQIALICLMAY 624
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+GSFVPA SAE+ +LD I+TR+GASD + GRSTF+ E+ E + IL TAQSLV++DE+
Sbjct: 625 IGSFVPAESAEIGMLDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLVLIDEI 684
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTST+DG+++A+A ++L + + + LF THY ++ + ++ G V H
Sbjct: 685 GRGTSTYDGLSLAWACAEWLAKKTQSLTLFATHYFELTSLPSQLKG-VANVH-------- 735
Query: 941 VMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
+D++ D + +++ V G + S+G VA LA +P I+ A A LE E+S+
Sbjct: 736 ----LDAREHNDTIVFMHSVQEGAASKSYGLAVAALAGVPKPVITMAKQRLAHLE-ELSA 790
Query: 1000 RVQ--NRSAKRDLLVKLSDQEQEAQENMPVSP 1029
+ + N S + DLL E +Q + +SP
Sbjct: 791 QTRNVNDSPQADLLFA----EPISQNSAEISP 818
Score = 40.4 bits (93), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTASIPTF 148
QQ ++LK ++PD+LL +G + F +DA+ AA +L I A A +P
Sbjct: 3 QQYLQLKAQHPDILLFYRMGDFYELFYDDAKRAAVLLDISLTKRGASAGEPIPMAGVPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGLSALYTKATL 199
+ ++ +LV G V + +Q + AA K GP R + + T T+
Sbjct: 63 AVEGYLAKLVALGESVAICEQIGDPAAAK-------GPVERKVVRIVTPGTV 107
>gi|322390457|ref|ZP_08063977.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
903]
gi|321142856|gb|EFX38314.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
903]
Length = 849
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 256/933 (27%), Positives = 425/933 (45%), Gaps = 172/933 (18%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K +P QQ +++K YPD L+ +G + F EDA AA++L I + ++
Sbjct: 4 EKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ L+ G+KV + +Q E P +A G R + + T T+
Sbjct: 64 MAGVPYHSAQQYIDVLIEQGYKVAIAEQME-------DPKEAKGVVKREVVQVITPGTVV 116
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ E+N+LV + D GN D L + D+V G
Sbjct: 117 DSTK-------PDSENNFLVAL-DRSGN-------------DYGLAYM-------DLVTG 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
EF + +L+ ++ G+ + + +++L YA P RV +
Sbjct: 149 EFQ-----------VTTLNDFSMVCGEIRNLRAREVVLGYALPEQEERVFVSQ------- 190
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM--NMPDLAVQALALTIRH 378
M+L + E L N V G+H S +E + Q + H
Sbjct: 191 ------MNLLLSHVETALDN-------VQLLGDHLSELEKKTAGKLLQYVHQTQMRELSH 237
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
LK+ A + ++M + T L++ N G ++G+L ++ T T
Sbjct: 238 LKK----------AHHYEICDFLQMDFA--TKASLDLTENGRTGKKHGSLYWYLDETKTA 285
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLLR W+ PL D I R D + + H + SD+T
Sbjct: 286 MGGRLLRSWIQKPLVDLKRIRERQDIIQVFMD-------------HFFERSDLT------ 326
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---------MQAILYAGKQLQQL 549
SL DI+R +R+ P + + + +++IL L
Sbjct: 327 --------DSLKGVYDIERLASRVSFGKINPKDLLQLGDTLGHVPTIKSIL--------L 370
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSP---AVIGKAAKLLSTVNKEAADQGDLLNLM 606
I + + ++ L RLI +A +P AVI + ++ T E DQ ++ +
Sbjct: 371 GIGDPVLDVLIARLDELPELHRLITSAIAPEASAVITEG-NIIRTGFDEQLDQYRVV--L 427
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF-- 664
G +E+ AKE S I + ++ + V+ + L +PA+F
Sbjct: 428 RDGTGWIAEI--------EAKEREASGITGLKIDYNKKDGYYFHVTN-SQLSHVPAHFFR 478
Query: 665 KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
K L ++ T++ R ++L A ++ A N E TI R +E G Y Q
Sbjct: 479 KATLKNSERFGTEELARIEG-DMLEAREKSA--NLEYTIFMR-----IREEVGKYIQRLQ 530
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPN 783
QA+A +D L +LA+++ ++ RP+F HE +I I GRHPV++ ++ +++PN
Sbjct: 531 QLAQAIATVDVLQSLASVAESQRLNRPLF---HEERRIAIDKGRHPVVEKVMGAQSYIPN 587
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
+ ER+ Q+ITGPNM GKS Y+RQ+A+I I+AQ+GS+VPA AEL + D IYTR+G
Sbjct: 588 SIFMDEERD-IQLITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQKAELPIFDAIYTRIG 646
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + G+STF+ E+ EA++ +R T QSL++ DELGRGT+T+DG+A+A + ++Y+ +
Sbjct: 647 AADDLVSGQSTFMVEMMEANHAIRKATTQSLILFDELGRGTATYDGMALAQSIIEYIHDR 706
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
LF THY ++ + + + HV+ L + D VT+L+K+ PG
Sbjct: 707 TGAKTLFATHYHELTALSETLS-RLENVHVATL-----------ERDGQVTFLHKIEPGP 754
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
++ S+G VA++A LP + RA I KLE +
Sbjct: 755 ADKSYGIHVAKIAGLPEELLKRADAILTKLEGQ 787
>gi|337282898|ref|YP_004622369.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
15912]
gi|335370491|gb|AEH56441.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
15912]
Length = 849
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 256/930 (27%), Positives = 425/930 (45%), Gaps = 166/930 (17%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K +P QQ +++K YPD L+ +G + F EDA AA++L I + ++
Sbjct: 4 EKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVTAAQILEISLTSRNKNAENPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ L+ G+KV + +Q E P +A G R + + T T+
Sbjct: 64 MAGVPYHSAQQYIDVLIEQGYKVAIAEQME-------DPKEAKGVVKREVVQVITPGTVV 116
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ E+N+LV + D GN G+ +++ TG+
Sbjct: 117 DSTK-------PDSENNFLVAL-DRSGN---------------DFGLAYMDLVTGEFQVT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
ND + G + +L E++LG L +Q E++ ++ + VE A D + G
Sbjct: 154 TLNDFSMVCG---EIRNLRAREVVLGYELPEQEERVFVSQMNLLLS-HVETALDDVQLLG 209
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
D LS E + + H++ M +L+ HLK
Sbjct: 210 ---------------DQLSELEKKTAGKLLRYVHQT------QMRELS---------HLK 239
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ A + ++M + T L++ N G ++G+L ++ T T G
Sbjct: 240 K----------AHHYEICDFLQMDFA--TKASLDLTENARTGKKHGSLYWYLDETKTAMG 287
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLR W+ PL D I R D + + H + SD+T
Sbjct: 288 GRLLRSWIQKPLVDLKRIRERQDIIQVFMD-------------HFFERSDLT-------- 326
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ--------LHID 552
SL DI+R +RI P + +L+ G L L I
Sbjct: 327 ------DSLKGVYDIERLASRISFGKINPKD-------LLWLGDTLGHVPTIKSILLGIG 373
Query: 553 GEYREKVTSKTLHSALLKRLILTASSP---AVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
+ + ++ L RLI +A +P AVI + ++ T E DQ ++ +
Sbjct: 374 DPVLDVLIARLDELPELHRLITSAIAPEASAVITEG-NIIRTGFDEQLDQYRVV--LRDG 430
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVP 667
G +E+ AKE S I + ++ + V+ + L +PA+F K
Sbjct: 431 TGWIAEI--------EAKEREASGITGLKIDYNKKDGYYFHVTN-SQLSHVPAHFFRKAT 481
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
L ++ T++ R ++L A ++ A N E TI R +E G Y Q
Sbjct: 482 LKNSERFGTEELARIEG-DMLEAREKSA--NLEYTIFMR-----IREEVGKYIQRLQQLA 533
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTN 786
QA+A +D L +LA+++ ++ RP+F HE +I I GRHPV++ ++ +++PN
Sbjct: 534 QAIATVDVLQSLASVAESQQLNRPLF---HEERRITIDKGRHPVVEKVMGAQSYIPNSIF 590
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
+ ER+ Q+ITGPNM GKS Y+RQ+A+I I+AQ+GS+VPA AEL + D IYTR+GA+D
Sbjct: 591 MDEERD-IQLITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQRAELPIFDAIYTRIGAAD 649
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
+ G+STF+ E+ EA++ +R T QSL++ DELGRGT+T+DG+A+A + ++Y+ +
Sbjct: 650 DLVSGQSTFMVEMMEANHAIRKATPQSLILFDELGRGTATYDGMALAQSIIEYIHDRTGA 709
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ + + + H++ L + D VT+L+K+ PG ++
Sbjct: 710 KTLFATHYHELTALSETLS-HLENVHIATL-----------ERDGQVTFLHKIEPGPADK 757
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
S+G VA++A LP + RA I KLE +
Sbjct: 758 SYGIHVAKIAGLPEELLERADAILTKLEGQ 787
>gi|291538969|emb|CBL12080.1| DNA mismatch repair protein MutS [Roseburia intestinalis XB6B4]
Length = 892
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 250/950 (26%), Positives = 430/950 (45%), Gaps = 171/950 (18%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
+YTP+ QQ ++ K +Y D +L +G + F +DA + +K L G +
Sbjct: 14 EYTPMMQQYLKTKEEYKDCILFYRLGDFYEMFFDDAIVVSKELELTLTGKSCGAEERAPM 73
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT---L 199
+P + ++ +LV G KV + +Q E + G R + + T T +
Sbjct: 74 CGVPYHAVEGYLNKLVANGHKVAICEQVEDPKLAK------GLVKREVIRIVTPGTNTDM 127
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
+A ++ ++NY++C+V D + G+ +ISTGD
Sbjct: 128 QALDE---------SKNNYIMCIV------------YLADKY----GISLADISTGDYFV 162
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLL-------GQPLSKQTEKMLLAYAGPASNVRVECA 312
E + L + +P+E++ G LS ++
Sbjct: 163 TEVD---TERKLIDEINKFAPSEIICNESFYMSGVDLSDMKNRL---------------- 203
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
G A+ + + Y ++T N ++ V ++EG + + D A +
Sbjct: 204 -------GIAVYSLEAWY--FSDETAENTLKEHFKV-------QSLEG-LGLSDYACGTI 246
Query: 373 AL--TIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
A +R+L + + L A +G M + ++T + LE++ + G+LL
Sbjct: 247 AAGALLRYLYETQKNDLGNLSAIHPYSTGKY-MIIDSSTRRNLELVETLREKQKRGSLLW 305
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++ T T G+R LR +V PL D+ I R +A+ E+ +D
Sbjct: 306 VLDKTKTAMGARTLRAYVEQPLIDKTEIELRQEAIGEL--------------------ND 345
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL---------- 540
I + L+ + D++R ITR+ +RTA P + IA +I
Sbjct: 346 HVITREELREYLNPIY-------DLERLITRVTYRTANPRDLIAFKNSISMLPPIKSLLD 398
Query: 541 -YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
+ G L+ + D + E++ S L+ R I+ P + + +
Sbjct: 399 EFDGALLKNIQNDIDAMEELCS------LVDRSIM--EEPPI--------------SVRE 436
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIE 659
G L I G +V + R A K L L R++ G++NL+ + +E
Sbjct: 437 GGL-----IKEGYNEDVDKYRNAKTEGKTWLAELEAKEREKTGIKNLKIKYNKVFGYYLE 491
Query: 660 LPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
+ ++K VP + + + RY +PE+ D + A ++L + + +
Sbjct: 492 VTNSYKDLVPDYFTRKQTLANAERYITPELKELEDMILGAEDKLVSLEYDLFCEVRNKIA 551
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Q +A+A LD +LA ++ N+ RP + I I GRHPV++ ++
Sbjct: 552 EEVVRIQRTAKAIANLDVFVSLAVVADQNNYCRPKMTNSG---VIDIKGGRHPVVEKMIT 608
Query: 778 -DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
D F+ NDT L IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA+SA++ ++D
Sbjct: 609 NDMFIDNDTYLDNGNNRIAIITGPNMAGKSTYMRQAALIVLMAQIGSFVPATSAKISIVD 668
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
I+TR+GASD + G+STF+ E+NE + ILRN T+ SL+++DE+GRGTST DG++IA+A
Sbjct: 669 RIFTRVGASDDLASGQSTFMVEMNEVANILRNATSNSLLVLDEIGRGTSTFDGLSIAWAV 728
Query: 897 LDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVT 954
++++ + LF THY ++ T+ G + H +Y + K G D+
Sbjct: 729 VEHISNPRLLGAKTLFATHYHEL----TELEGKLNNVH-NYCIAVKEKG-------DDIV 776
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA-EVSSRVQN 1003
+L K+V G ++ S+G +VA+LA +P S I RA I +L A +++S +N
Sbjct: 777 FLRKIVQGGADKSYGIQVAKLAGVPDSVIERAKEIVEELSANDITSVTKN 826
>gi|197335682|ref|YP_002155290.1| DNA mismatch repair protein MutS [Vibrio fischeri MJ11]
gi|238690254|sp|B5FAC8.1|MUTS_VIBFM RecName: Full=DNA mismatch repair protein MutS
gi|197317172|gb|ACH66619.1| DNA mismatch repair protein MutS [Vibrio fischeri MJ11]
Length = 854
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 194/637 (30%), Positives = 323/637 (50%), Gaps = 75/637 (11%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ +N + G + TL I++HT T GSRLL+RW+ P+ ++++ RLDA
Sbjct: 268 LDAATRRNLEITQNLAGGFNH-TLAEILDHTSTAMGSRLLKRWLHQPVRTHDVLNQRLDA 326
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
+ E+ ES G + +D+ PQ L ++G D++R + R+
Sbjct: 327 IGELKES-GLF-------------ADIA---PQ--------LKNIG---DVERILARLAL 358
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
R+A P + + A+ +QL +L S+T L+ A+S I
Sbjct: 359 RSARPRDLARLRNAL----QQLPEL-----------SQTTQEFQQNHLLTLAASAQPIDS 403
Query: 585 AAKLLSTVNKEAA-----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRK 639
+LL KE D G ++++G E+ + R A + L+ L R+
Sbjct: 404 ICELLERAIKENPPVVIRDGG------VLADGYNEELDQWRDLANGATQYLEKLEQEERE 457
Query: 640 QLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
+ + L+ + +V G I + K P ++ + + K RY PE+ D++ +
Sbjct: 458 RHDIDTLKVGYNNVHGFYIQISKGQSHKAPAHYVRRQTLKNAERYIIPELKEHEDKVLNS 517
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
+ + + W+ + + + Q+ A++ LD L LA + N+ RPV +
Sbjct: 518 KSKALAIEKRLWEELFDQLLPHLEQLQSMANAISELDVLSNLAERADTLNYCRPVLTKE- 576
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
I+I GRHPV++ ++ D F+ N L+ +R+ IITGPNMGGKS Y+RQ ALI +
Sbjct: 577 --TGINIEGGRHPVVEQVMSDPFIANPIKLNPDRKML-IITGPNMGGKSTYMRQTALIAL 633
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MA VG +VPA SAE+ LD I+TR+GASD + GRSTF+ E+ E + IL N T SLV++
Sbjct: 634 MAHVGCYVPADSAEIGTLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKHSLVLM 693
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
DE+GRGTST+DG+++A+A+ ++L M LF THY ++ ++ FTG + H+ +
Sbjct: 694 DEIGRGTSTYDGLSLAWASAEWLATKINAMTLFATHYFELTELPNLFTG-LANVHLDAV- 751
Query: 938 SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA-E 996
+ ++ +++ V G + S+G VA LA +P S I +A LE+ +
Sbjct: 752 ----------EHGDEIAFMHAVQEGAANKSYGLAVASLAGVPKSVIKKAKQKLQHLESGQ 801
Query: 997 VSSRVQNRSAKRDLLVKLSDQEQEAQENMP-VSPESF 1032
VS + + K + + L + E +E + V+P+
Sbjct: 802 VSVPATSTTVKEEHQLSLIPEISEVEEALANVNPDDL 838
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLD 137
T +K+TP+ QQ + LK++ PD+LL +G + F +DA+ A+++L I +
Sbjct: 3 TKSTEKHTPMMQQYLRLKSENPDILLFYRMGDFYELFYDDAKRASQLLEISLTKRGSSAG 62
Query: 138 HNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKA 197
A IP + ++ +LV G V + +Q A GP R + + T
Sbjct: 63 EPIPMAGIPYHAVEGYLAKLVQQGESVAICEQIGDPAT------SKGPVERKVVRIVTPG 116
Query: 198 TL 199
T+
Sbjct: 117 TV 118
>gi|399545598|ref|YP_006558906.1| DNA mismatch repair protein mutS [Marinobacter sp. BSs20148]
gi|399160930|gb|AFP31493.1| DNA mismatch repair protein mutS [Marinobacter sp. BSs20148]
Length = 875
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 259/927 (27%), Positives = 407/927 (43%), Gaps = 148/927 (15%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL-----DH 138
T + K TP+ QQ +++K ++P+ L+ +G + F +DA+ A++++ I +
Sbjct: 6 TESPKITPMMQQYLKIKGQHPNELVFYRMGDFYELFYDDAKKASELMDITLTARGQSGGN 65
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
A IP ++ RLV AG + + +Q A GP R + + T T
Sbjct: 66 PIPMAGIPYHAAEGYIARLVRAGQSIAICEQMGDPAT------SKGPVDRQVVRIVTPGT 119
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
L D ED N LV + + G +++IS+G
Sbjct: 120 L---SDDAYLED---RRDNLLVAIYHHKQH----------------FGFSSLDISSGRFA 157
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQ--PLSKQTEKML-LAYAGPASNVRVECASRD 315
E N L+ L LSPAE+L+ + P + E + GP
Sbjct: 158 VSELNSP---EALQGELQRLSPAEILISEDFPFADLLEGFTGIRRQGP------------ 202
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
L+E + + Q D+ G M++ A L
Sbjct: 203 ------------WLFEPDTARRVITQQLQVRDLTGFGCED------MHLAVCAAGCLLQY 244
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
R ++ L I L R + M+ A + + LE+ N G++Y TL +M+ T
Sbjct: 245 ARETQRTALPHIRKLSRERREDAVIMD----AASRRNLEIDTNLMGGTQY-TLAWVMDRT 299
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G R LRRW+ PL D ++ R AVS + K+ D +
Sbjct: 300 ATAMGGRQLRRWLNRPLRDVAVVRQRQQAVSALL-----------------KDFDCEPIH 342
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF------IAVMQAILYAGKQLQQL 549
Q L S+G DI+R + R+ R+A P + AV+ + + +
Sbjct: 343 DQ--------LKSIG---DIERILARVALRSARPRDIARLRDAFAVLPDLQKSLAMVDST 391
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
H+ G+ + + LL R I+ + P VI + +I+
Sbjct: 392 HV-GQLATTIGEYPQLADLLGRAIID-NPPVVIREGG--------------------VIA 429
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVP 667
+G +E+ R ++A + L + +++ G+ L+ + V G I + + P
Sbjct: 430 DGFDAELDDLRNISENAGQYLLDVETREKQRTGISTLKVGYNRVHGYYIEISRLQSAQAP 489
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
++ + + K R+ +PE+ D+ A +A WD L+ A Q A
Sbjct: 490 ADYIRRQTLKNAERFITPELKEFEDKALSAKSRALAREKALWDEVLETVAAELAPLQDAA 549
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNL 787
QALA LD L A + + P F D EP + I GRHPV++ +L D FVPN+ +
Sbjct: 550 QALAELDVLSNFAERASSLRLCAPQFSD--EP-GLQIEEGRHPVVEQLLDDPFVPNNLLI 606
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
A+R +ITGPNMGGKS Y+RQVALI ++A GSFVPA SA L +D I+TRMG+SD
Sbjct: 607 DAKRRML-VITGPNMGGKSTYMRQVALIALLAYTGSFVPADSAVLGPVDRIFTRMGSSDD 665
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
I GRSTF+ E+ E + IL N T SLV++DE+GRGTST DG+++A+AT +YL C
Sbjct: 666 IAGGRSTFMVEMTETANILHNATKHSLVLMDEVGRGTSTFDGLSLAWATAEYLARDILCY 725
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ + + +V +LT+ ++ D + +L+ V G + S
Sbjct: 726 TLFATHYFELTQLADELEHAVNV----HLTA--------TEHDDSIVFLHNVHEGPASQS 773
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLE 994
+G +VA+LA +P I A A LE
Sbjct: 774 YGLQVAKLAGVPLEVIRNAKAQLANLE 800
>gi|225572115|ref|ZP_03780979.1| hypothetical protein RUMHYD_00409 [Blautia hydrogenotrophica DSM
10507]
gi|225040449|gb|EEG50695.1| DNA mismatch repair protein MutS [Blautia hydrogenotrophica DSM
10507]
Length = 877
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 334/638 (52%), Gaps = 86/638 (13%)
Query: 393 SFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPL 452
S R S M L ++T + LE++ + G+LL +++ T T G+R+LR +V PL
Sbjct: 256 SIRPYSADKYMLLDSSTRRNLELVETLREKKKRGSLLGVLDKTRTAMGARMLRSYVEQPL 315
Query: 453 CDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRS 512
D+ I RLDA+ E+ N + + E Y LG
Sbjct: 316 IDKEKIEERLDAIEEL-------------------NQNALLREELREY--------LGPI 348
Query: 513 PDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALL--- 569
D++R + RI +++A P + +A ++ K L L RE + + HS LL
Sbjct: 349 YDLERLVGRISYKSANPRDLVAFRSSL----KMLPYL------RELL--REFHSPLLMQI 396
Query: 570 -KRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKE 628
+R+ ++ KA ++ D G II +G EV R++ K+
Sbjct: 397 HERMDAMEELENLVSKA--IVEEPPLAMKDGG------IIKDGYNEEVDNYRRSKSEGKQ 448
Query: 629 ELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPE 686
L L R++ G+R+++ + +E+ +FK VP ++ + + + RY +PE
Sbjct: 449 WLTQLEARERERTGIRSMKIKYNRVFGYYLEVTNSFKDQVPEDYIRKQTLSNSERYVTPE 508
Query: 687 VLTALDQLALANE------ELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA 740
L L+ L L E E + C+ D+ +E Q +A+A LD L +LA
Sbjct: 509 -LKELENLILGAEDKLYALEYELFCQVR-DTVGREV----VRIQKTAKAVATLDVLASLA 562
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREYCQIITG 799
++ N+ RP + I I +GRHPV++ ++ D F+ NDT L ++ +ITG
Sbjct: 563 LVAERNNYTRPKI---NTQGVIDIKNGRHPVVEQMIENDMFIANDTYLDNNKKRISVITG 619
Query: 800 PNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEEL 859
PNM GKS Y+RQ ALI +MAQ+GSFVPA A + ++D I+TR+GASD + G+STF+ E+
Sbjct: 620 PNMAGKSTYMRQSALIVLMAQLGSFVPADKANIGIVDRIFTRVGASDDLASGQSTFMVEM 679
Query: 860 NEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFVTHYPKI 917
E + ILRN TA+SL+I+DE+GRGTST DG++IA+A ++++ K LF THY ++
Sbjct: 680 TEVANILRNATAKSLLILDEIGRGTSTFDGLSIAWAVIEHISNPKILGAKTLFATHYHEL 739
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
+++ K +G V Y V+ + K D D+ +L K+V G ++ S+G +VA+LA
Sbjct: 740 TELEGKISG-VNNYCVA----------VKEKGD-DIVFLRKIVKGGADRSYGIQVARLAG 787
Query: 978 LPPSCISRATVIAAKL-EAEVSSRVQNRSA--KRDLLV 1012
+P S + RA + +L ++++++ V++ +A K+D +V
Sbjct: 788 VPESVLDRAKELVEELVDSDITATVRDLTAPKKKDSIV 825
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
+P+ Q+ V+ K +Y D +L +G + F EDA +A++ L I L+
Sbjct: 4 SPMMQEYVKTKEEYKDCILFYRLGDFYEMFFEDATLASQELEITLTGKDCGLEERAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQ 169
+P + +V +L+ G+KV + +Q
Sbjct: 64 VPYHAADTYVNKLIEKGYKVAICEQ 88
>gi|90412105|ref|ZP_01220112.1| DNA mismatch repair protein [Photobacterium profundum 3TCK]
gi|90327083|gb|EAS43462.1| DNA mismatch repair protein [Photobacterium profundum 3TCK]
Length = 845
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 187/598 (31%), Positives = 303/598 (50%), Gaps = 75/598 (12%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ +N S G + TL +++HT T GSRLL+RW+ P+ D ++ RLDA
Sbjct: 257 LDAATRRNLELTQNLSGGFD-NTLASVLDHTATPMGSRLLKRWLHQPIRDTKQLNHRLDA 315
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
++ ++ + ++ VL +G D++R + R+
Sbjct: 316 IAAFKDT-------------------------GMFIEVAEVLHHMG---DLERILARLAL 347
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHID------GEYREKVTSKTLHSALLKRLILTASS 578
R+A P + +A M++ L + QL ++ D GE LL+R I+ +
Sbjct: 348 RSARPRD-LARMRSALQSLPQLAEVLADIEQPRIGELANSSAPMDDLCELLERAII--EN 404
Query: 579 PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCR 638
P VI + D G +++ G +E+ R AK+ LD L R
Sbjct: 405 PPVIIR-------------DGG------VLAPGYNAELDEWRDLADGAKKFLDDLETRER 445
Query: 639 KQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLAL 696
+Q G+ +L+ F V G I + P ++ + + K RY PE+ D++
Sbjct: 446 EQHGIDSLKVGFNQVHGFFIQISRGQSHLAPDHYVRRQTLKNAERYIIPELKEHEDKVLN 505
Query: 697 ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDD 756
+ + + + W+ + + + Q A AL+ LD L LA + N+ RP D
Sbjct: 506 SKSKALGLEKKLWEELFDQLLPHLEQLQNAASALSELDVLANLAERADTLNYCRPELTDQ 565
Query: 757 HEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIG 816
I I +GRHPV++ +L + F+ N +LH +R IITGPNMGGKS Y+RQ ALI
Sbjct: 566 ---TGIEIAAGRHPVVEQVLSEPFIANPISLHHDRRML-IITGPNMGGKSTYMRQTALIA 621
Query: 817 IMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVI 876
+MA VGSFVPA + ++ LD I+TR+GASD + GRSTF+ E+ E + IL N T++SLV+
Sbjct: 622 LMAHVGSFVPAEAVKIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATSKSLVL 681
Query: 877 VDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL 936
+DE+GRGTST+DG+++A+A+ ++L E M LF THY ++ ++ + G + H+ +
Sbjct: 682 MDEIGRGTSTYDGLSLAWASAEWLAEKIAAMTLFATHYFELTELPSMMDG-LANVHLDAV 740
Query: 937 TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ ++ +++ V G + S+G VA LA +P + I RA +LE
Sbjct: 741 -----------EHGDEIAFMHAVQEGAASKSYGLAVASLAGVPKAVIKRAKAKLTQLE 787
>gi|153811376|ref|ZP_01964044.1| hypothetical protein RUMOBE_01768 [Ruminococcus obeum ATCC 29174]
gi|149832503|gb|EDM87587.1| DNA mismatch repair protein MutS [Ruminococcus obeum ATCC 29174]
Length = 872
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 256/955 (26%), Positives = 434/955 (45%), Gaps = 155/955 (16%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
++ + K Y D +L +G + F +DA + +K L G L+ IP
Sbjct: 3 REYCKTKENYKDCILFYRLGDFYEMFFDDAILVSKELELTLTGKDCGLEERAPMCGIPFH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDVGG 207
+++RL+ G KV + +Q E P KA G R + + T T A +
Sbjct: 63 AAETYIKRLIEKGHKVAICEQVE-------DPKKAKGLVKREVIRVVTPGTTLDATSLDE 115
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
+NYL+ +V + G +I+TGD E +
Sbjct: 116 SR------NNYLMSIV----------------SLEDHFGCAIADITTGDCFLTEVDKP-- 151
Query: 268 RSGLEAVLLSLSPAELLLGQPL---SKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
L + PAE++ TE + +R+ D + +L
Sbjct: 152 -QKLLDEINKFVPAEIICNDAFFMSGVDTEDL-------KDRLRICIFPLDNWYFDDSLC 203
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ +L E+ +TL Q+ D G+ +A AL + ++ L
Sbjct: 204 Q-RTLKEHFHVNTLEGLGLQDYD-----------SGV-----IAAGALFQYLNETQKTAL 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
+ A+ + M + +++ + LE++ + G+LL +++ T T G+R L
Sbjct: 247 SHM----ATIHPYTADKFMLIDSSSRRNLELVETLREKQKRGSLLWVLDKTKTAMGARTL 302
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
R +V PL D I+ RL AV E+ + +P +
Sbjct: 303 RGYVEQPLIDAEEINLRLGAVEELTQ------------------------KPMLRDEIRE 338
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQ--------QLHIDG 553
L + D++R I+RI +++A P + +A ++ I Y + LQ Q+ D
Sbjct: 339 YLNPI---YDLERLISRISYQSANPRDMVAFASSLEMIPYIRQILQEFEAPILKQIFEDM 395
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ E VT L+KR I P + K D G II G
Sbjct: 396 DPLEDVTD------LIKRAI--TDEPPLAQK-------------DGG------IIREGYN 428
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWA 671
++V + R + K+ L L +++ G++ L+ + +E+ +FK VP N+
Sbjct: 429 ADVDKYRHSRTDGKKWLAELEAREKERTGIKTLKIKYSRVFGYALEVTNSFKDQVPDNYV 488
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY + E+ D + A + L + + + G Q +A+A
Sbjct: 489 RKQTLTNAERYITQELKDLEDLILGAEDRLYALEYELFADVRDKVGKEVVRIQKTAKAIA 548
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAE 790
ALD +LA ++ NFVRP +E + I +GRHPV++ ++ D F+ NDT L +
Sbjct: 549 ALDVFASLALVAERNNFVRPKI---NENGVLDIKNGRHPVVEQMIENDMFIANDTYLDNQ 605
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
++ IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA A + ++D I+TR+GASD +
Sbjct: 606 KKRVSIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAEKANIGIVDRIFTRVGASDDLAS 665
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MV 908
G+STF+ E+ E + ILRN T++SL+I+DE+GRGTST DG+AIA++ ++++ K C
Sbjct: 666 GQSTFMVEMTEVANILRNATSRSLLILDEIGRGTSTFDGLAIAWSVIEHISNTKLCGAKT 725
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ +++ K G V Y ++ + K D D+ +L K+V G ++ S+
Sbjct: 726 LFATHYHELTELEGKIPG-VNNYCIA----------VKEKGD-DIVFLRKIVKGGADKSY 773
Query: 969 GFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQNRSAKRDLLVKLSDQEQEAQ 1022
G +VA+LA +P S I+RA + +L +A++++ V++ +A + + DQ AQ
Sbjct: 774 GIQVAKLAGVPDSVINRAKELVEELSDADITAAVKDLTAPKKKQKIVYDQVDMAQ 828
>gi|452203891|ref|YP_007484024.1| DNA mismatch repair protein MutS [Dehalococcoides mccartyi DCMB5]
gi|452110950|gb|AGG06682.1| DNA mismatch repair protein MutS [Dehalococcoides mccartyi DCMB5]
Length = 858
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 270/955 (28%), Positives = 446/955 (46%), Gaps = 165/955 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFM-------T 142
TPL +Q +++K YP+ ++ +G + F EDA +AA+ L I L M
Sbjct: 5 TPLRKQYLDIKKNYPEAIVFFRLGDFYETFEEDARIAARELEIV--LTSREMGKGLKVPL 62
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
A IP L+ ++ RL+N G+KV + +Q PG+ G R ++ L T T+
Sbjct: 63 AGIPYHALDNYLSRLINKGYKVAICEQVTK-------PGETKGLVQRQVTRLVTPGTVVE 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ ++ N+L+ + + + G F D G IS
Sbjct: 116 PNLLQTKQN------NFLLSLYLTEDSCGL----AFADISTSEFGCTQTNISE------- 158
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
LEA + LSPAE++L + Q+ + + +++ + D +
Sbjct: 159 ---------LEAEISRLSPAEIILPK---NQSLNLPI-------HLKATISKLDGYYFEA 199
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+A E L + E QN+ G NMP LA+ A + +L++
Sbjct: 200 DIAR---------ERLLRHFECQNLSA----------YGCENMP-LAISAAGALLNYLEE 239
Query: 382 FG------LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
LER+ S + + M+M ++TL LE+ R++ S G+LL I++ T
Sbjct: 240 TQKSSLKQLERL-----SVYTTADYMQM--DSHTLSNLEIFRSSGGNSLKGSLLGILDQT 292
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G RLLR+++ PL ++ I RL AV Y ES+ +
Sbjct: 293 KTAMGGRLLRKFLGQPLLKQSDIEKRLSAVD--------YFFEESLAR------------ 332
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
+S+ SLG+ D++R RI +T P E I++ ++
Sbjct: 333 -------TSLAKSLGQIADMERMANRIRQKTILPRELISLKNSL---------------- 369
Query: 556 REKVTSKTLHSALLK--RL--ILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIIS 609
E V++ L+ RL L P ++L +NK D L + +I
Sbjct: 370 -ETVSAIHRQFGLMPPPRLAYFLNGLKPL-----PEMLDIINKTITDDPPSTLGDGKVIR 423
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVP 667
G E+ + A+ L + R++ G+++L+ + IE+ AN VP
Sbjct: 424 AGFDPEMDKLCSLAGDARTFLSQMETRERERTGIKSLKLGYNRVFGYYIEISNANLGDVP 483
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+ + + R+ +PE+ + + A E L + ++ L + GG+Y+ A
Sbjct: 484 PEFIRKQTLVNAERFITPELKEYENLILNAKERLLEMETGLYEQVLNQLGGFYSALLANA 543
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTN 786
ALAALD L A A ++ ++VRPVF H ++ I GRHP+++ L +FV ND +
Sbjct: 544 AALAALDVLSAFAEVAVRNSYVRPVF---HPENRLDIRKGRHPMVEQGLGYGSFVANDIS 600
Query: 787 LHAEREYCQII--TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
L AE CQII TGPNM GKS Y++Q ALI +MAQ+GS+VPA +AEL + D I+TR+GA
Sbjct: 601 LSAED--CQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFTRIGA 658
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+ + G+STF+ E+ E + IL T++SL+I+DE+GRGTST+DG+AIA A ++Y+
Sbjct: 659 REDLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQP 718
Query: 905 K--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
LF THY ++ ++ + + V Y+++ S+ +V +L+K+VPG
Sbjct: 719 SLTAKTLFATHYHELVELAS-YLPRVTNYNIAV-----------SEDRGEVVFLHKIVPG 766
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
+ S+G VA+LA LP I RA + +LE + ++R+ + L + ++ Q
Sbjct: 767 GVDKSYGIHVAKLAGLPKWVIKRAYEVLTELENPAKKQPKSRTCQSQLQLPMTGQ 821
>gi|302670850|ref|YP_003830810.1| DNA mismatch repair protein MutS [Butyrivibrio proteoclasticus B316]
gi|302395323|gb|ADL34228.1| DNA mismatch repair protein MutS [Butyrivibrio proteoclasticus B316]
Length = 880
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 248/934 (26%), Positives = 440/934 (47%), Gaps = 149/934 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
Q ++ K + D +L +G + F +DA++A+K L G L+ +P
Sbjct: 3 QHYLQTKKENKDCILFYRLGDFYELFFDDAKVASKELELTLTGKACGLEERAPMCGVPFH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT---LEAAEDV 205
++ ++ +LV G+KV + +QTE + G R ++ + T T +++ E+
Sbjct: 63 AVDSYLTKLVGRGYKVAICEQTEDPKLAK------GIVKREVTRIVTPGTNLNMQSLEET 116
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
++NY++ ++ N+G + +++TGD E +
Sbjct: 117 ---------KNNYIMSILYSPDNIG----------------ISIADVTTGDYYLTEVDS- 150
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
LR L+ + + P+E++ + S S V +E L +
Sbjct: 151 -LREALDEIGKYM-PSEIICNESFS-------------VSGVDME-----------DLRD 184
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE-GIMNMPDLAVQALALTIRHLKQFGL 384
M ++ N E + + + + S I G+ + P+ V A AL +++L
Sbjct: 185 RMQIFVNQLESRYFDEDSSKKLLMKHFKVSSLIGLGVDDFPNGVVAAGAL-LQYLIDMQK 243
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
+ + + L+ S M L ++T + LE++ + + GTLL +++ T T G+R L
Sbjct: 244 SDVGNITHIYPYLA-SKYMLLDSSTRRNLELVETMRDKQKRGTLLWVLDKTKTAMGARTL 302
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
R ++ PL DRN I R AV + +++ S E + ++
Sbjct: 303 RSFIEQPLIDRNEILKRQSAVESLVKNVVS---REEIREY-------------------- 339
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI-LYAGKQLQQLHIDGEYREKVTSKT 563
LG D++R +++I ++TA P + +A +I + + L + +
Sbjct: 340 ----LGPIYDLERLMSKIIYKTANPRDLLAFRNSISMIPAIKTALLDVQSDAELSALEDN 395
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAV 623
L + R I A++ + + KE+ II G +++ R+A
Sbjct: 396 LDAL---RDIYELIDQAIVEEPPLAI----KESG---------IIKEGFDADIDHFREAG 439
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIR 681
+ K L + +++ G++NL + + E+ +FK VP + + + R
Sbjct: 440 TNGKTWLAEMEESEKEKTGIKNLRIKYSNVFGYSFEVTNSFKDKVPEYFIRKQTLTNCER 499
Query: 682 YHSPE-------VLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
Y +PE +L A D+L N E + C+ DS E Q +A+A LD
Sbjct: 500 YTTPELKELEDTILNAQDKLN--NLEYEMFCKIR-DSIALEID----RIQTTAKAIALLD 552
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAERE 792
+LA ++ ++V+P +E I+I GRHPV++ +L D F+ NDT L ++
Sbjct: 553 VYASLAYVAEKNHYVKPSI---NEKGIINIKEGRHPVVERMLDTSDMFISNDTYLDNKKH 609
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS Y+RQ ALI +MAQ+GSFVPAS A++ V+D I+TR+GASD + G+
Sbjct: 610 CISIITGPNMAGKSTYMRQTALIVLMAQIGSFVPASKADICVVDRIFTRVGASDDLGSGQ 669
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLF 910
STF+ E+NE + ILRN T SL+I+DE+GRGTST+DG+AIA+A +++ K LF
Sbjct: 670 STFMVEMNEVANILRNATPNSLLILDEIGRGTSTYDGLAIAWAVTEHISNRKILGAKTLF 729
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ +++ K +V Y ++ ++ D+ +L K+V G ++ S+G
Sbjct: 730 ATHYHELTELEGKM-DNVNNYCIAV-----------KENGDDIVFLRKIVKGGADKSYGI 777
Query: 971 KVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQN 1003
+VA+LA +P I RA I +L + +++ +VQ+
Sbjct: 778 QVAKLAGVPDMVIDRAKEIVTELTDNDITEKVQS 811
>gi|421504007|ref|ZP_15950951.1| DNA mismatch repair protein MutS [Pseudomonas mendocina DLHK]
gi|400345108|gb|EJO93474.1| DNA mismatch repair protein MutS [Pseudomonas mendocina DLHK]
Length = 855
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 276/934 (29%), Positives = 422/934 (45%), Gaps = 161/934 (17%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTA 143
T ++TP+ QQ +LK ++PD L+ +G + F EDA+ AAK+L I
Sbjct: 2 TDLSQHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQ 61
Query: 144 SIPTFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
SIP + H + +LV G V + +Q A GP R + + T T
Sbjct: 62 SIPMCGIPFHSVEGYLAKLVKLGESVVICEQIGDPATSK------GPVERQVVRIITPGT 115
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ + D N L V+ D+ +FG ++ D+
Sbjct: 116 ISDEALLDEHRD------NLLAAVLGDER--------LFG-------------LAVLDIT 148
Query: 259 YGEFNDGFLR--SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA-SRD 315
G F+ +R L A L LSPAELL+ + L A S R RD
Sbjct: 149 SGRFSVQEIRGWENLLAELERLSPAELLI----PDDWPQGLPAEKRKGSRRRAPWDFDRD 204
Query: 316 CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
+ SL + G L +N+ + AI + A +
Sbjct: 205 --------SAFKSLCQQFGTQDLKGFGCENLTL--------AIGAAGCLLSYAKETQRTA 248
Query: 376 IRHLKQFGLER----IMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+ HL+ ER ++ GAS R+L +L+V N G TL +
Sbjct: 249 LPHLRSLRHERLDDTVILDGASRRNL--------------ELDV---NLAGGRDNTLQSV 291
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
M+ T SRLL RW+ PL DR ++ AR DA++ + + YR
Sbjct: 292 MDRCQTAMASRLLGRWLNRPLRDRAVLEARQDAIACL---LDGYR--------------F 334
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH- 550
++PQ L +G D++R + RI R A P + +A ++ L A LQQ
Sbjct: 335 ETLQPQ--------LKEIG---DLERILARIGLRNARPRD-LARLRDALAALPDLQQAMT 382
Query: 551 -IDGEYREKVTSKTLH----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
+D + +++ + + LL R I+ + PAVI L + + E D L
Sbjct: 383 TLDTPHLQQLATSIATYPELADLLARAIID-NPPAVIRDGGVLKTGYDAEL----DELQA 437
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
M + GQF AR+ ++ G+ NL+ + V G + IELP
Sbjct: 438 MSENAGQFLMDLEAREKART----------------GLANLKVGYNRVHG--YFIELPTK 479
Query: 664 --FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
P ++ + + K R+ +PE+ D+ A + +D L+ G+ A
Sbjct: 480 QAESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYDELLERLIGHLA 539
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
Q + ALA LD L LA + N + RP FVD EP + I GRHPV++ +L FV
Sbjct: 540 PLQDSAAALAELDVLSNLAERALNLDLNRPRFVD--EPC-MRIDRGRHPVVEQVLTTPFV 596
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
ND +L R IITGPNMGGKS Y+ Q ALI ++A +GSFVPA++ E+ ++D I+TR
Sbjct: 597 ANDLDLDDNRRML-IITGPNMGGKSTYMCQTALIVLLAHIGSFVPAAACEMSLVDRIFTR 655
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+G+SD + GRSTF+ E++E + IL N + +SLV++DE+GRGTST DG+++A++ ++ L
Sbjct: 656 IGSSDDLAGGRSTFMVEMSETANILHNASERSLVLMDEVGRGTSTFDGLSLAWSAAEH-L 714
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
+ LF THY ++ + + V H+S T H ++ + +L+ V P
Sbjct: 715 AGLRAFTLFATHYFELT-VLPESEPVVANVHLSA-TEH----------NERIVFLHHVQP 762
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
G + S+G VAQLA +P S ISRA A+LEA
Sbjct: 763 GPASQSYGLAVAQLAGVPGSVISRAREHLARLEA 796
>gi|429094316|ref|ZP_19156863.1| DNA mismatch repair protein MutS [Cronobacter dublinensis 1210]
gi|426740698|emb|CCJ82976.1| DNA mismatch repair protein MutS [Cronobacter dublinensis 1210]
Length = 853
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 253/929 (27%), Positives = 411/929 (44%), Gaps = 162/929 (17%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ ++LK ++PD+LL +G + F +DA+ A+++L I A A
Sbjct: 10 HTPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMA 69
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LVN G V + +Q A GP R + + T T+
Sbjct: 70 GVPHHAVENYLAKLVNLGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEA 123
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L + D GF G ++IS+G E
Sbjct: 124 LLQERQD------NLLAAIWQD------------AKGF----GYATLDISSGRFRLTEPQ 161
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D R + A L +PAELL + ++
Sbjct: 162 D---RETMAAELQRTNPAELLYAEDFAE-------------------------------- 186
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQ------GNHRSAIEGIMNMPD--LAVQALALT 375
MSL E + +D Q G G+ N P A L
Sbjct: 187 ---MSLIEGRRGLRRRPLWEYELDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQY 243
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
++ ++ L I + R G + + A T + LE+ +N + G + TL +++ T
Sbjct: 244 VKDTQRTSLPHIRSITME-RQQDG---IIMDAATRRNLEITQNLAGGVD-NTLASVLDCT 298
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
+T GSR+L+RW+ P+ D N++ R A++ + E ++
Sbjct: 299 VTPMGSRMLKRWLHMPVRDTNVLRNRQQAIAALMEYSAD-------------------IQ 339
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----H 550
P VL +G D++R + R+ RTA P + +A M+ +A +QL L
Sbjct: 340 P--------VLRQVG---DLERILARLALRTARPRD-LARMR---HAFQQLPTLSTLLAD 384
Query: 551 IDGEYREKVTSKTLHSALLKRLILTA--SSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
ID +Y + + + A L+ L+ A +P V+ + D G +I
Sbjct: 385 IDADYVQTLRGQMGDFAELRDLLERAIIEAPPVLVR-------------DGG------VI 425
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKV 666
+ G E+ R A + LD L R++LG+ L+ F +V G + + V
Sbjct: 426 APGYHEELDEWRALADGATDYLDRLEIREREKLGIDTLKVGFNAVHGYFIQVSRGQSHMV 485
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P+++ + + K RY PE+ D++ + + + + +D + AE Q +
Sbjct: 486 PIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLAELQKS 545
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTN 786
ALA LD L LA + N+ P D +P I + GRHPV++ +L + F+ N +
Sbjct: 546 AAALAELDVLANLAERADTLNYHCPTLTD--KP-GIRLVEGRHPVVERVLNEPFIANPLS 602
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
L +R IITGPNMGGKS Y+RQ ALI +MA +GSFVPA AE+ +D I+TR+GA+D
Sbjct: 603 LSPQRRML-IITGPNMGGKSTYMRQTALIVLMAYIGSFVPAEEAEIGPIDRIFTRVGAAD 661
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
+ GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A + L K
Sbjct: 662 DLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLANRIKA 721
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
+ LF THY ++ + K G V H+ + + + +++ V G +
Sbjct: 722 LTLFATHYFELTQLPEKMEG-VANVHLDAI-----------EHGDTIAFMHSVQDGAASK 769
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEA 995
S+G VA LA +P I RA +LE+
Sbjct: 770 SYGLAVAALAGVPKEVIKRARQKLRELES 798
>gi|431796339|ref|YP_007223243.1| DNA mismatch repair protein MutS [Echinicola vietnamensis DSM 17526]
gi|430787104|gb|AGA77233.1| DNA mismatch repair protein MutS [Echinicola vietnamensis DSM 17526]
Length = 869
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 253/940 (26%), Positives = 425/940 (45%), Gaps = 154/940 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL +Q +K K+P LL+ VG + FGEDA A+KVL I N A
Sbjct: 12 TPLMKQYNSIKAKHPGALLLFRVGDFYETFGEDAVTASKVLDIVLTKRANGAASHIELAG 71
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
P L+ ++ +LV AG +V + Q E P + G RG++ L T L +
Sbjct: 72 FPHHSLDSYLPKLVRAGNRVAICDQLE-------DPKEVKGIVKRGVTELVTPG-LSFND 123
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+V +NYL + FG LG+ +++STG+ + E N
Sbjct: 124 NVLDKR-----RNNYLASIY-------------FGKQ---DLGIAFLDLSTGEFMCAEGN 162
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ E +L S SP+E++ + + ++L +D F
Sbjct: 163 ASYI----EKLLQSFSPSEIIYSKADKTKAAELL----------------KDDFTTFHCE 202
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE-GIMNMPDLAVQALALTIRHLKQF 382
V Y+ E + + N+ +G +E GI+ A + +L++
Sbjct: 203 DWVFQ-YDYTYEKLTDHFQTANL----KGFGIETLEHGII--------AAGAVLYYLEET 249
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
+ + + A R ++ + L T++ LE++ +G L+ I++ T+T GSR
Sbjct: 250 EHKEVKHIAAISR-IAEEKFVWLDKFTIRNLELVYPQQDGG--VPLIQILDQTVTPMGSR 306
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
++++W+ PL ++ I RL V H E+ +
Sbjct: 307 MMKKWMVLPLKEKAPIEERLKVVDHF---------------HAEQE------------LA 339
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
+L+ L D++R I+++ P E + QL K
Sbjct: 340 EEILSHLKHIGDLERIISKVAVARINPRE--------------MNQL-----------KK 374
Query: 563 TLHSAL-LKRLILTASSPAV------IGKAAKLLSTVNKEAADQGDLLNLM--IISNGQF 613
L S L +K L+ +P++ I LL ++KE + +L II +G
Sbjct: 375 ALKSTLPIKELLKKQKNPSLKKLGDQINACEFLLEKIDKELKEDAPMLTHQGNIICDGVD 434
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWA 671
+E+ RK S K+ L + ++ G+ +L+ + +E+ K VP W
Sbjct: 435 AELDEYRKLSTSGKDYLVQIQQREIQRTGISSLKIAYNKVFGYYLEVSNTHKDKVPAEWI 494
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY + E+ D++ A E+L ++ ++ ++ G Y + Q + LA
Sbjct: 495 RKQTLVNAERYITEELKEYEDKILHAEEKLVVLEHKYFNLLVQSAGEYVTQIQENARILA 554
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHA 789
+DCL + A+++ + RP D + I GRHPV++ L +++VPND L
Sbjct: 555 TVDCLLSFASVAARNGYCRPKVADTD---TLEIKDGRHPVIEKQLPVGEDYVPNDIYLDN 611
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ IITGPNM GKS +RQ ALI +MAQ+GSFVPAS A + ++D ++TR+GASD++
Sbjct: 612 STQQIIIITGPNMAGKSALLRQTALIVLMAQMGSFVPASYARIGIIDKVFTRVGASDNLS 671
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CM 907
+G STF+ E+ E + IL N + +SLV++DE+GRGTST+DG++IA++ +++L H K
Sbjct: 672 KGESTFMVEMTETASILNNLSDRSLVLMDEIGRGTSTYDGISIAWSIVEFLHNHPKFNAK 731
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ + F V ++VS + +D+ V ++ K+ G SE S
Sbjct: 732 TLFATHYHELNQLAEDFP-KVKNFNVS----------VKEVADK-VIFMRKLKEGGSEHS 779
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAK 1007
FG VAQ+A +P + RA I LE + Q K
Sbjct: 780 FGIHVAQMAGMPNPVVLRAAEIMGHLEKDKDMHQQQEKMK 819
>gi|170054869|ref|XP_001863325.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
gi|167875012|gb|EDS38395.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
Length = 1130
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 276/995 (27%), Positives = 442/995 (44%), Gaps = 144/995 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP +Q ELK+++ D +L +VG + + DA + K LG ++++ F + P
Sbjct: 205 TPAMRQWWELKSRHYDCVLFFKVGKFYELYHMDASVGVKELG-FSYMKGEFAHSGFPEQA 263
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA---GPFGRGLSALYTKATLEAAEDVG 206
LV G+KV V+QTET + + K + + + + +L+ E G
Sbjct: 264 YERMATSLVERGYKVARVEQTETPDMMSERCKKNKTNSKYDKVVKREICQVSLKGTEVYG 323
Query: 207 GG-EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
+ + NY++ + + + GK ++G VR GV ++ S G GEF+D
Sbjct: 324 QQVQMTQSADPNYMLAIAER--SAGKGKSG------GVRYGVCFIDTSLGIFHLGEFDDD 375
Query: 266 FLRSGLEAVLLSLSPAELL----LGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
S L +L +PA +L L P Q K +LA VR E + +
Sbjct: 376 GQASRLLTLLSHYAPALVLHERSLVSPGIHQIFKTVLA------GVRKEPLTNESQFWS- 428
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD-----------LAVQ 370
A + L EN S++++++ PE A+ +++ D L+++
Sbjct: 429 AEKTLKYLAENH---YGSSSDEKSAKWPE------AVRCLLDKNDHLGLTPNEDSELSLK 479
Query: 371 ALALTIRHLKQFGLERIMCLGASFR--------------SLSGSME-MTLSANTLQQLEV 415
AL I +LK+ L++ + A F +S S M L A TL L +
Sbjct: 480 ALGGCIWYLKRCLLDQQIVALAKFELYIPPDDNVTRKQLKISNSNRFMVLDAITLSNLRL 539
Query: 416 LRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSY 475
++G +LL+ ++H T +G RLL WV P C+R +I R DA+ E+ E +
Sbjct: 540 ----TDGEL--SLLNRLDHCCTKFGKRLLHHWVCSPSCEREIIIQRQDAIKELVEDIN-- 591
Query: 476 RTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIF-----HRTATPS 530
+L V LG PD++R + +I R
Sbjct: 592 -------------------------LLQDVRQILGELPDLERMLAQIHSFGNAERMKNHP 626
Query: 531 EFIAVM-QAILYAGKQLQQLHIDGEYREKVTS-----KTLHSALLKRLILTASSPAVIGK 584
+ A++ + Y+ K++Q + +T + S LL RL V
Sbjct: 627 DGRAILYEEQTYSKKKIQDFICTLRGFKALTRLPELFAGVKSDLLIRLTQLTLKGGVFPD 686
Query: 585 AAKLLSTVNKEAADQGDLLNLMIIS--NGQFSEVARARKAVQSAKEELDSLINMCRKQLG 642
A +S +E+ D L +I+ G +E ++ +Q +EL+ K G
Sbjct: 687 MASKISFF-EESFDHEAALKTGVIAPEKGLDTEYDAVQRDIQGILDELEEYKRKQEKYFG 745
Query: 643 MRNLEFMSVSGITHLIELP------ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLAL 696
+ +++ +E+P AN L K RYH+ E L ++
Sbjct: 746 CK-IDYFGSDKKRFQLEIPEGAAKKANSGYSLEGQK-KGKNGVKRYHTDETREFLKRMMQ 803
Query: 697 ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNK-NFVRPVFVD 755
++ +V + ++F Y ++ V + LD L ALA R+ + P +D
Sbjct: 804 TEDQRKVVLKDLARRIFEKFSSAYDMWKTCVDLVGTLDVLTALAEFGRSSGSTCFPEILD 863
Query: 756 -DHEPVQI-HICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
D E QI + G HP + +N++PN +L + ++TGPNMGGKS +RQV
Sbjct: 864 TDEEKGQIFELSEGIHPCVSDP--ENYIPNGVSLGQDGTRLILLTGPNMGGKSTLMRQVG 921
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
++ IMAQ+G+ +PA S L ++D I+TR+GA+D I G STFL ELNE S IL++ T +S
Sbjct: 922 VLAIMAQIGAPIPAESCRLTLIDRIFTRLGANDDIMAGHSTFLVELNETSTILKHATEKS 981
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHV 933
LV++DELGRGT+T+DG +IA A + +L E KC +F THY + D +
Sbjct: 982 LVLLDELGRGTATYDGTSIAGAVVQFLAEL-KCRSMFSTHYHNLVDNFER--------DE 1032
Query: 934 SYLTSHKVMGPMDSKSDQD------VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
L H M M K D + VT+LYK PG S+GF A+LA +PP I RA
Sbjct: 1033 RILLGH--MACMVEKEDDEDPTQETVTFLYKYAPGSCPKSYGFNAAKLAGMPPQIIKRAY 1090
Query: 988 VIAAKLEAEVSSRVQ--------NRSAKRDLLVKL 1014
++ +EAE R +R+ +DLL KL
Sbjct: 1091 ELSKTVEAEALKRKTFTKSLLQADRTEVQDLLRKL 1125
>gi|238924112|ref|YP_002937628.1| DNA mismatch repair protein MutS [Eubacterium rectale ATCC 33656]
gi|238875787|gb|ACR75494.1| DNA mismatch repair protein MutS [Eubacterium rectale ATCC 33656]
Length = 874
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 250/917 (27%), Positives = 426/917 (46%), Gaps = 134/917 (14%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTASIPTF 148
Q ++ K +Y D +L +G + F +DA M +K L G L+ +P
Sbjct: 3 QHYLQTKEQYKDCILFYRLGDFYEMFFDDAIMVSKELELTLTGKNCGLEERAPMCGVPFH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDVGG 207
+ ++ RLV+ G KV + +Q E P +A G R + + T T D+
Sbjct: 63 AADSYINRLVSNGHKVAICEQME-------DPKQAKGIVKREVIRVVTPGT---NTDMAS 112
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
++ ++NY++ +V + + G+ +++TGD E +
Sbjct: 113 LDEA---KNNYIMSIVYTED----------------KYGIATCDVTTGDFFTTEVDAE-- 151
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
R L+ V +P+E++ + + + + + ++ D + LA
Sbjct: 152 RKLLDEVS-RFNPSEIICNEAFYMSG----IDVDDMKNRLSITVSALDSWYFSDGLA--- 203
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
E LS+ Q ++ ++ S + +A AL + + L+ I
Sbjct: 204 ------NETLLSHFHVQTINALGLEDYESGV--------IAAGALLKYLYETQMNSLDNI 249
Query: 388 MCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRW 447
+ L S M + +++ + LE++ + G+LL +++ T T G+RLLR +
Sbjct: 250 LEL----HPYSIGKYMIIDSSSRRNLELVDTLREKQKRGSLLWVLDKTRTAMGARLLRTY 305
Query: 448 VTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLT 507
V PL ++ I R ++ E++ + +++T E + Y
Sbjct: 306 VEQPLIEKAEIIKR----QKLIEALNA--------------NEITRDEIREY-------- 339
Query: 508 SLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HIDGEYREKVTSKTLHS 566
L D++R ITRI +++A P + IA ++ QQL I E +++ +
Sbjct: 340 -LNPIYDLERLITRITYQSANPRDLIAFRDSLKMLPPIKQQLSDIPCELTDEINEEFDEL 398
Query: 567 ALLKRLILTASSPAVIGKAAKLLSTVNKE---AADQGDLLNLMIISNGQFSEVARARKAV 623
+ L LLS++ E + GD II G EV R R A
Sbjct: 399 KDIYEL---------------LLSSIEDEPPISQRDGD-----IIKAGYNEEVDRLRDAK 438
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIR 681
K L L R++ G++NL + +E+ +FK VP + + + R
Sbjct: 439 TKGKTWLAELEAGEREKTGIKNLRIKYNKVFGYYLEVTNSFKDMVPDYYVRKQTLTNAER 498
Query: 682 YHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALAT 741
Y +PE+ D + A + LT + + K+ + Q +A+A +D +LA
Sbjct: 499 YITPELKELEDTILGAEDRLTSLEYELFRDVRKQISCNVSRIQKTARAIAQIDVFASLAL 558
Query: 742 LSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREYCQIITGP 800
++ N+ +P +E I I +GRHPV++ ++ D F+ NDT L + IITGP
Sbjct: 559 VASQNNYCKPKI---NESGIIDIKNGRHPVVEKMITNDMFIENDTYLDQHKNRISIITGP 615
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NM GKS Y+RQ ALI +MAQ+GSFVPA +A + ++D I+TR+GASD + G+STF+ E+N
Sbjct: 616 NMAGKSTYMRQTALIVLMAQIGSFVPAQTANIGIVDRIFTRVGASDDLASGQSTFMVEMN 675
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFVTHYPKIA 918
E + ILRN TA+SL+I+DE+GRGTST DG++IA+A ++++ K LF THY ++
Sbjct: 676 EVANILRNATAKSLLILDEIGRGTSTFDGLSIAWAVVEHISNPKLLGAKTLFATHYHELT 735
Query: 919 DIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQL 978
+++ K SV Y ++ + K D D+ +L K+V G ++ S+G +VA+LA L
Sbjct: 736 ELEGKL-DSVNNYCIA----------VKEKGD-DIVFLRKIVKGGADRSYGIQVAKLAGL 783
Query: 979 PPSCISRATVIAAKLEA 995
P S I RA IA +L A
Sbjct: 784 PDSVIERAKEIAEQLLA 800
>gi|71666642|ref|XP_820278.1| mismatch repair protein MSH3 [Trypanosoma cruzi strain CL Brener]
gi|70885616|gb|EAN98427.1| mismatch repair protein MSH3, putative [Trypanosoma cruzi]
Length = 942
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 206/655 (31%), Positives = 324/655 (49%), Gaps = 89/655 (13%)
Query: 378 HLKQFGLERI---MCL--------GASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
+L + L R+ MCL A+ S++G ME L +TL L++ ++S G++ G
Sbjct: 332 YLAPYRLNRVYEKMCLEAGQTLPRNAAIDSVTGKME--LPGSTLSALDIF-HSSIGAK-G 387
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L+ +++H+LT G R LR W++ P C+ N I+AR +AVS + H E
Sbjct: 388 SLMALLDHSLTTPGVRRLRLWLSEPPCEMNTITARRNAVSFLL--------------HGE 433
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
++ VT +L R DI+ + ++ + + +E+I +++A L
Sbjct: 434 DDNTVT-----------HLLRECARFGDIEATLGKMRAQRCSVAEYIQLLRA-------L 475
Query: 547 QQLHIDGEYREKVTSKTLHSALLKR-------LILTASSPAVIGKAAKLLSTVNKEAADQ 599
++ H TL A+L R LIL + A + E
Sbjct: 476 EKAH------------TLAHAVLSRNDGRIDNLILETLQRVTSAETANFIQLCKCEMESH 523
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEE----LDSLINMCRKQLGMRNLEFMSVSGIT 655
S+G V A + +A++E LD + R+ L M +LE+ +++G
Sbjct: 524 ATSPLEYFTSHG--VSVPSAMQTHLTARDEALHALDEELEYIRQTLRMPDLEYRTIAGTP 581
Query: 656 HLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
++++P +VP +W + TK +R+H+P ++ L A E L I + AW
Sbjct: 582 FIVDVPQAKCNRVPKDWLVLTRTKSHVRFHTPNIVDRNVSLCSARERLLIAAKEAWQQKQ 641
Query: 714 KEFGG---YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
E FQA + A+A LD + L S ++ +V P D + I GRHP
Sbjct: 642 DELSNSSLAMNAFQAVIDAVAVLDAIRCLTVTSSSRGYVAPELSDG--ATCLKIVGGRHP 699
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
VLD IL +V D L + I+TGPNMGGKS +R V IMAQ+G +VPA++A
Sbjct: 700 VLDNILRGGYVSCDFCLAKGGAW--ILTGPNMGGKSALMRMVGAFVIMAQLGCYVPATAA 757
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC-TAQSLVIVDELGRGTSTHDG 889
+L + +Y RMGASDS+ +G STFL+E+ E S ILR+ + SLV++DELGRGTS+ DG
Sbjct: 758 QLPLFTAVYCRMGASDSLLEGTSTFLKEMQETSRILRSPRVSSSLVLLDELGRGTSSFDG 817
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIADI---KTKFTGSVGTYHVSYLTSHKVMGPMD 946
+A+A ATL+YLL+ M LFVTHY + + T V Y++ + G
Sbjct: 818 IAVAAATLEYLLQRGTTM-LFVTHYSHLCEPYLHNTSEGKQVSCYYMGFSEEQDEEG--- 873
Query: 947 SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
+ + + YK PGV+ SSFG +VA++A LP ++ A ++ E E +R+
Sbjct: 874 EDREPKLVFTYKPTPGVTPSSFGVRVARMAGLPHDVVAEAQRLSEMEEREHMTRM 928
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 90 TPLEQQVVELKTKYP-DVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
TPLE+QVV LK P DV+LM+ GY+ +F+G D+ +A++ LGI F ++S+P
Sbjct: 38 TPLEKQVVCLKESLPPDVVLMVACGYRVKFYGRDSRVASRRLGIMCIGTTPFESSSVPYV 97
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
R+N++V RLV G++V Q E A+I+A G F R ++ + ++ TL +E +G
Sbjct: 98 RVNLYVHRLVAMGYRVAFADQ-ENASIRATSGTAKGIFTREITRVCSRGTLLPSEVIG 154
>gi|210612717|ref|ZP_03289432.1| hypothetical protein CLONEX_01634 [Clostridium nexile DSM 1787]
gi|210151410|gb|EEA82418.1| hypothetical protein CLONEX_01634 [Clostridium nexile DSM 1787]
Length = 875
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 249/942 (26%), Positives = 435/942 (46%), Gaps = 159/942 (16%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMTASIPTF 148
QQ +E K +Y D +L +G + F +DA E+ + G L+ +P
Sbjct: 3 QQYMETKEQYKDCILFYRLGDFYEMFFDDALTVTKELDITLTGKNCGLEERAPMCGVPYH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT---LEAAEDV 205
+ ++ +LV G+KV + +Q E + G R + + T T +A ++
Sbjct: 63 AVEGYLTKLVQKGYKVAICEQVEDPKLAK------GIVKREVVRIVTPGTNINTQALDET 116
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
++NY++C+V D R G+ ++STGD E + G
Sbjct: 117 ---------KNNYIMCIV------------YIAD----RYGLSVADVSTGDYFVTELDSG 151
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
L + SP+E++ + L ++ G L +
Sbjct: 152 ---RKLGDEIAKFSPSEIICNESL---------------------------YMSGLDLED 181
Query: 326 V-----MSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI----MNMPDLAVQALALTI 376
+ +++Y DT ++ V + S++EG+ N +A AL +
Sbjct: 182 LKNRLGITIY---SLDTWYFDDAMCTKVLKDHFKVSSLEGLGLTDYNCGLIAAGALLQYL 238
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
++ L + S + M L +++ + LE+ + G+LL +++ T
Sbjct: 239 YETQKTSLAHL----TGIISYTTGKYMLLDSSSRRNLELCETLREKQKRGSLLWVLDKTK 294
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G+R LR +V PL + + RLDAV E+ + S E + ++ + P
Sbjct: 295 TAMGARTLRSFVEQPLIHKEEVIKRLDAVGELKDDAIS---REEIREY---------LTP 342
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HIDGEY 555
+ D++R I++I +++A P + IA + L+ L HI
Sbjct: 343 VY---------------DLERLISKISYQSANPRDLIAFKSS-------LEMLPHI---- 376
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGDLLNLMIISNG 611
K + + LLK L + + + +L+ E A +G II G
Sbjct: 377 --KYILGDMKTPLLKELYEELDT---LEELCQLIQHAICEEPPLAMKEGG-----IIKEG 426
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN 669
+V + R A K L L R++ G++NL+ + +E+ ++K VP
Sbjct: 427 YHPDVDKLRNAKTEGKTWLAELETEEREKTGIKNLKIKYNKVFGYYLEVTNSYKELVPDY 486
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY P + D + A ++L + + + Q +A
Sbjct: 487 YTRKQTLANAERYIIPRLKELEDTILGAEDKLYALEYELYCNVRDTIADEVVRIQKTAKA 546
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLH 788
+A +D +LA ++ N+VRP +E I I +GRHPV++ ++ D F+ NDT L
Sbjct: 547 IAQIDVFASLALVAERNNYVRPKI---NEKGVIDIKNGRHPVVEKMIPNDMFIANDTYLD 603
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
++ IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA +A + ++D I+TR+GASD +
Sbjct: 604 DKKNRVSIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAETANIGIVDRIFTRVGASDDL 663
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KC 906
G+STF+ E+ E + ILRN T++SL+I+DE+GRGTST DG++IA+A ++++ K
Sbjct: 664 ASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVVEHISNGKLLGA 723
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ +++ K SV Y ++ + K D D+ +L K+V G ++
Sbjct: 724 KTLFATHYHELTELEGKI-DSVNNYCIA----------VKEKGD-DIVFLRKIVKGGADK 771
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQNRSAK 1007
S+G +VA+LA +P S I+RA I ++L EA++++RV++ S +
Sbjct: 772 SYGIQVAKLAGVPESVIARAKEIVSELSEADITTRVRDISVQ 813
>gi|157961022|ref|YP_001501056.1| DNA mismatch repair protein MutS [Shewanella pealeana ATCC 700345]
gi|189083192|sp|A8H1T4.1|MUTS_SHEPA RecName: Full=DNA mismatch repair protein MutS
gi|157846022|gb|ABV86521.1| DNA mismatch repair protein MutS [Shewanella pealeana ATCC 700345]
Length = 859
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 257/954 (26%), Positives = 424/954 (44%), Gaps = 146/954 (15%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
+K+TP+ +Q + LK ++PD+LL +G + F EDA+ A+++LGI IP
Sbjct: 10 EKHTPMMRQYLTLKAQHPDMLLFYRMGDFYELFYEDAKKASELLGISLTARGKSGGDPIP 69
Query: 147 TFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
L H + +LV V + +Q A GP R + + T TL
Sbjct: 70 MAGLPYHAVEGYLAKLVQLRVSVAICEQVGDPATSK------GPVERKVVRIVTPGTL-- 121
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
++ + D + + G G G+ +++++G V E
Sbjct: 122 --------------TDEALLQERQDNLLAALYQGKTGYGY------ATLDVASGRFVVTE 161
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ LEA L +PAELL + S+ + ++ G E C
Sbjct: 162 LANT---EALEAELQRTNPAELLYSEDFSQMS--LIAGMNGTRRRPEWEFDYDTC----- 211
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
Q M + + G GI + L++QA ++++K
Sbjct: 212 ----------------------QRMLLNQFGTKDLKGFGIED-ARLSLQAAGCLMQYVKD 248
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ + + R + S + L A T + LE+ N G E TL ++++T+T GS
Sbjct: 249 TQRTALPHINSIVR-FNQSDSIVLDAATRRNLELTVNLQGGRE-NTLASVLDNTVTPMGS 306
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R+L+RW+ PL D ++I AR +++E+ + G + T
Sbjct: 307 RMLQRWIHQPLRDHDIIRARQASIAELMMT-GDFET------------------------ 341
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
LS L +LG D++R RI R A P +F + QA+ QLQQ
Sbjct: 342 LSEDLKALG---DVERITARIALRNARPRDFARLRQALTLL-PQLQQ------------- 384
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFSEVARA 619
TL +A L + V + LLS + D +L + +I G E+ +
Sbjct: 385 -TLSAASAPHLKYLSQVIGVFPEEVDLLS---RAVVDNPPMLIRDGGVIREGYNEELDQW 440
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTK 677
RK + A + L L ++Q G+ L+ + V G + + VPL++ + + K
Sbjct: 441 RKLSEGATDYLHELEAREKEQTGISTLKVGYNRVHGYYIEVSRRESDLVPLSYQRRQTLK 500
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
T RY PE+ +++ + + + W+ E Q QA A LD L
Sbjct: 501 NTERYIIPELKEHEEKVLSSQGRALALEKQLWEQLFDLILPKLHELQDFAQASAELDVLC 560
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQII 797
A + + N+ P IHI +GRHPV++ + F+ N L+A+R+ I+
Sbjct: 561 NFAERAESLNYHCPEL---SSISGIHIEAGRHPVVEQVSQSPFIANPVTLNAQRKML-IV 616
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNMGGKS Y+RQVALI +MA +G +VPA A + +D I+TR+GASD + GRSTF+
Sbjct: 617 TGPNMGGKSTYMRQVALITLMAHIGCYVPAEQAVIGPVDRIFTRIGASDDLASGRSTFMV 676
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
E+ E + IL N T SLV++DE+GRGTST+DG+++A++ +YL + + M LF THY ++
Sbjct: 677 EMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWSAAEYLAKQLQAMTLFATHYFEL 736
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
+ + + +V H+ + + + +++ V G + S+G +VA LA
Sbjct: 737 TQLPEQLS-NVENVHLDAV-----------EHGDSIVFMHAVQEGAASRSYGLQVAALAG 784
Query: 978 LPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPES 1031
+P IS A +LE+ RD V+ + ++Q Q+NM P +
Sbjct: 785 VPNCVISAAKHKLHQLES------------RDHDVQQNTEQQGTQQNMSFVPSA 826
>gi|330817624|ref|YP_004361329.1| DNA mismatch repair protein MutS [Burkholderia gladioli BSR3]
gi|327370017|gb|AEA61373.1| DNA mismatch repair protein MutS [Burkholderia gladioli BSR3]
Length = 915
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 258/922 (27%), Positives = 407/922 (44%), Gaps = 136/922 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K+++PD L+ +G + F +DAE A+++L + A + A
Sbjct: 36 HTPMMQQYLRIKSEHPDTLVFYRMGDFYELFYDDAEKASRLLDLTLTQRGASGGNPIKMA 95
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G V + +Q A GP R + + T TL A
Sbjct: 96 GVPHHAVEQYLAKLVKFGESVAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 149
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D YL+ + ++G + GV + +G+ + +++G + E
Sbjct: 150 LLSDKAD------VYLLAL-----SLGHNKRGVLTN-----VGLAWLNLASGALRLAEIA 193
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 194 PDELGAALERI----RPAEILAADAAIEAVP------AGAGAVTRVPAWHFDIASGTQRL 243
Query: 324 A---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+V SL E G +L+ SA + A +RH++
Sbjct: 244 CSQLDVASL-EGFGAHSLT----------------SACGSAGALLLYAASTQGQQLRHVR 286
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+E + S + L T + LE L G+E TL +++ T G
Sbjct: 287 SLKVE------------TESEYIGLDPATRRNLE-LTETLRGTESPTLYSLLDTCGTTMG 333
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLLR W+ HP AR A+ + E+ G
Sbjct: 334 SRLLRHWLHHPPRASVAAQARQQAIGALLEAAGEAS------------------------ 369
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L S+ +L + D++R R+ +A P + ++ E R ++
Sbjct: 370 -LDSLRGALRQVADVERITGRLALLSARPRDLSSLRDTFTSLP----------ELRARIA 418
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEV 616
++ L RL PA G A L V E A D G +I+ G +E+
Sbjct: 419 PIAQQASALARLEAALEPPA--GCADLLTRAVAPEPAAMVRDGG------VIARGYDAEL 470
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 471 DELRDISENCGQFLIDLEARERARTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 530
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D+ L+ + E Q ALA LD
Sbjct: 531 TLKNAERYITPELKTFEDKALSAQERALSRERALYDALLQSLLPHIEECQRVAGALAELD 590
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L ER+
Sbjct: 591 LLCAFAERARALDWVAPRFSDE---IGIEIEQGRHPVVEA-QVEQFIANDCRLGNERKLL 646
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA SA +D I+TR+GA+D + GRST
Sbjct: 647 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRST 705
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL + C LF THY
Sbjct: 706 FMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLSNNGCYTLFATHY 765
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 766 FELTQLPVEFPHAANVHLSAVEHGHGIV------------FLHAVNDGPANQSYGLQVAQ 813
Query: 975 LAQLPPSCISRATVIAAKLEAE 996
LA +PP+ I A A LE +
Sbjct: 814 LAGVPPAVIRAARKHLAHLEQQ 835
>gi|423685247|ref|ZP_17660055.1| DNA mismatch repair protein MutS [Vibrio fischeri SR5]
gi|371495748|gb|EHN71343.1| DNA mismatch repair protein MutS [Vibrio fischeri SR5]
Length = 854
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 182/598 (30%), Positives = 301/598 (50%), Gaps = 73/598 (12%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ +N + G + TL I++HT T GSRLL+RW+ P+ ++++ RLDA
Sbjct: 268 LDAATRRNLEITQNLAGGFNH-TLAEILDHTSTAMGSRLLKRWLHQPVRTHDVLNQRLDA 326
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
+ E+ ES + ++ L ++G D++R + R+
Sbjct: 327 IGELKES-------------------------GLFADMAPQLKNIG---DVERILARLAL 358
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
R+A P + + A+ +QL +L S+T L+ A+S I
Sbjct: 359 RSARPRDLARLRNAL----QQLPEL-----------SQTTQEFQQDHLLTLAASAQPIDS 403
Query: 585 AAKLLSTVNKEAA-----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRK 639
+LL KE D G ++++G E+ + R A + L+ L R+
Sbjct: 404 ICELLERAIKENPPVVIRDGG------VLADGYNEELDQWRDLANGATQYLEKLEQEERE 457
Query: 640 QLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
+ + L+ + +V G I + K P ++ + + K RY PE+ D++ +
Sbjct: 458 RHDIDTLKVGYNNVHGFYIQISKGQSHKAPAHYVRRQTLKNAERYIIPELKEHEDKVLNS 517
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
+ + + W+ + + + Q+ A++ LD L LA + N+ RPV +
Sbjct: 518 KSKALAIEKRLWEELFDQLLPHLEQLQSMANAISELDVLSNLAERADTLNYCRPVLTKE- 576
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
I+I GRHPV++ ++ D F+ N L+ +R+ IITGPNMGGKS Y+RQ ALI +
Sbjct: 577 --TGINIEGGRHPVVEQVMSDPFIANPIKLNPDRKML-IITGPNMGGKSTYMRQTALIAL 633
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MA VG +VPA SAE+ LD I+TR+GASD + GRSTF+ E+ E + IL N T SLV++
Sbjct: 634 MAHVGCYVPADSAEIGTLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKHSLVLM 693
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
DE+GRGTST+DG+++A+A+ ++L M LF THY ++ ++ FTG + H+ +
Sbjct: 694 DEIGRGTSTYDGLSLAWASAEWLATKINAMTLFATHYFELTELPNLFTG-LANVHLDAV- 751
Query: 938 SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
+ ++ +++ V G + S+G VA LA +P S I +A LE+
Sbjct: 752 ----------EHGDEIAFMHAVQEGAANKSYGLAVASLAGVPKSVIKKAKQKLQHLES 799
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K+TP+ QQ + LK++ PD+LL +G + F +DA+ A+++L I +
Sbjct: 7 EKHTPMMQQYLRLKSENPDILLFYRMGDFYELFYDDAKRASQLLEISLTKRGSSAGEPIP 66
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
A IP + ++ +LV G V + +Q A GP R + + T T+
Sbjct: 67 MAGIPYHAVEGYLAKLVQQGESVAICEQVGDPAT------SKGPVERKVVRIVTPGTV 118
>gi|357015317|ref|ZP_09080316.1| DNA mismatch repair protein [Paenibacillus elgii B69]
Length = 930
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 251/921 (27%), Positives = 419/921 (45%), Gaps = 139/921 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
KYTP+ +Q + +K + PD L +G + F +DA +AA+ L G +
Sbjct: 3 KYTPMIEQYLSVKAEVPDAFLFFRLGDFYEMFFDDAVLAARELEITLTGREGGGEERIPM 62
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P ++ RLV G+KV + +Q E P +A G R + + T T+
Sbjct: 63 CGVPYHSAESYIARLVEKGYKVAICEQVED-------PAEAKGVVRREIVRIVTPGTVMD 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
A + + NY+V VV G G GF A +ISTG++
Sbjct: 116 ARSLSETVN------NYIVAVVYSGG----------GYGF------AACDISTGELYVTR 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
F+ F L L + SP+ELL + + +Q A+ A E AS GGG
Sbjct: 154 FSGSF--ELLLDELNTYSPSELLGSEAVLEQIRGSASAWLKSAVMTPREPAS-----GGG 206
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ E L+ +E Q +PE G + LAL + +L++
Sbjct: 207 LVPE--GLF----------SEKQLASLPESGR----------------ETLALLMGYLQE 238
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+R + R + M + T + LE++ + S+ GTLL ++++T+T G
Sbjct: 239 TQ-KRSLSHIKHIRVYEPNQYMVMDPFTRRNLELVETVRDRSKKGTLLWLLDNTVTAMGG 297
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLRRW+ PL + I+ RL+AV + + IV +
Sbjct: 298 RLLRRWIEKPLMNAVHINDRLEAVDRLYNQL--------------------IVRDELKQA 337
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L V D++R RI + +A + +A+ + LQQ+ E E S
Sbjct: 338 LKEVY-------DLERLTARIAYGSANARDLVALKVS-------LQQVPALREQCEASGS 383
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG--DLLNLMIISNGQFSEVARA 619
+TL A+ A I L++ + + D+ + + +I G + + +
Sbjct: 384 RTL-----------AALAARIDPCQDLMTWIAEAIVDEPPVSVRDGGMIRAGLSARLDQL 432
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKT 679
R+A + K+ L L R++ G+++L+ + IE+ + L + K+T
Sbjct: 433 REASANGKQWLAELEKQERERTGIKSLKIGFNKVFGYFIEVTKSNLAQLEEGRYER-KQT 491
Query: 680 I----RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
+ R+ +PE+ + A E + + + + Y Q + +A +D
Sbjct: 492 LANAERFVTPELKEKEALILEAQESMVDLEYELFVGLRDQLASYIPRLQQLAELIATVDV 551
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYC 794
+LA +S + F RP D +E + I GRHPV++ +L D F+ N+T L E
Sbjct: 552 YQSLAHVSASNRFTRPEIGDFYE---LEIEEGRHPVVEAVLEDGVFIANETKLTREDGNM 608
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNM GKS Y+RQVA+I +MAQ+G FVPA A++ V+D I+TR+GA+D + G+ST
Sbjct: 609 LLITGPNMAGKSTYMRQVAMICLMAQIGCFVPAKRAKVPVIDRIFTRIGAADDLIGGQST 668
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ + + T +SLVI+DELGRGTST +G++IA A +++L + C L TH+
Sbjct: 669 FMVEMMDIQVMTEKATERSLVIIDELGRGTSTGEGMSIAQAVIEFLHDKIGCKTLVSTHF 728
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++A ++ G + Y ++ +S + VT+L +++ G + +S+G AQ
Sbjct: 729 HELAHLEESL-GGLRNYCMAV-----------KESGKQVTFLRRLIRGAASTSYGIYCAQ 776
Query: 975 LAQLPPSCISRATVIAAKLEA 995
+A LP S I R+ + EA
Sbjct: 777 IAGLPASIIDRSYELLNSFEA 797
>gi|149374515|ref|ZP_01892289.1| DNA mismatch repair protein [Marinobacter algicola DG893]
gi|149361218|gb|EDM49668.1| DNA mismatch repair protein [Marinobacter algicola DG893]
Length = 877
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 260/943 (27%), Positives = 412/943 (43%), Gaps = 170/943 (18%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL--- 136
S+ T +TP+ +Q +++K ++P+ L+ +G + F EDA+ AA+++ I
Sbjct: 2 SAAQTDLSHHTPMMRQYLKIKGEHPNELVFYRMGDFYELFYEDAKKAAELMDITLTARGQ 61
Query: 137 --DHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY 194
+ A IP ++ RLV AG + + +Q A GP R + +
Sbjct: 62 SGGNPIPMAGIPYHSAEGYIARLVRAGQSIAICEQIGDPATSK------GPVERKVVRIV 115
Query: 195 TKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR--LGVVAVEI 252
T TL DD + R+ + F R G +++I
Sbjct: 116 TPGTLS------------------------DDAFLEDRRDNLLVAIFSHREQFGFASLDI 151
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
S+G E +D GL+ L L PAE+L+ + Q +L Y G +R +
Sbjct: 152 SSGRFTVSELDD---LEGLQGELQRLRPAEILISEDFPYQ--DVLDGYTG----IRRQGP 202
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
L+E+ DT Q + V + G ++ LA+ A
Sbjct: 203 W---------------LFES---DTARRVITQQLQVRDLTGF-----GCEDLT-LAICAA 238
Query: 373 ALTIRHLKQF---GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
+++ K+ L I L R + + L A + + LE+ N G+++ TL
Sbjct: 239 GCLLQYAKETQRTALPHIRKLSRERREEA----VILDATSRRNLEIDTNLMGGTQH-TLA 293
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+M+ T T G R LRRW+ PL D ++ R AVS + + G H
Sbjct: 294 WVMDRTATAMGGRQLRRWLNRPLRDITVVEQRQQAVSALLD-----------GFH----- 337
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
Y + +L S+G DI+R + R+ R+A P + + A L
Sbjct: 338 ---------YEPVHDLLKSIG---DIERILARVALRSARPRDLARLRDAFLSLPD----- 380
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
L+R + SS V+ L+T+ E + DLL II
Sbjct: 381 -------------------LQRALTPVSSHHVVK-----LATIISEYPELSDLLERAIID 416
Query: 610 NGQFSEVARARKAVQSA-KEELDSLINMC--------------RKQLGMRNLE--FMSVS 652
N V R ++ +ELD L N+ R++ G+ L+ + V
Sbjct: 417 NPPV--VIRDGGVIREGFDDELDELRNISENAGQFLLDVETRERERTGISTLKVGYNRVH 474
Query: 653 GITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSF 712
G I + + P+++ + + K R+ +PE+ D+ A +A +D
Sbjct: 475 GYYIEITRAQSGQAPVDYIRRQTLKNAERFITPELKEFEDKALSAKSRSLAREKALYDEV 534
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVL 772
L+ A Q A QALA LD L A + + F P F D I GRHPV+
Sbjct: 535 LETVAAELAPLQDAAQALAELDVLSNFAERATSLRFNAPEFSD---TPGFDIEEGRHPVV 591
Query: 773 DTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
+ +L D +VPND + +R +ITGPNMGGKS Y+RQ ALI ++A GS+VPA+ +
Sbjct: 592 EQLLSDPYVPNDLLMDQQRRML-VITGPNMGGKSTYMRQAALIALLAYTGSYVPANRVVI 650
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
LD I+TRMG+SD I GRSTF+ E+ E + IL N T SLV++DE+GRGTST DG+++
Sbjct: 651 GPLDRIFTRMGSSDDIAGGRSTFMVEMTETANILHNATEYSLVLMDEVGRGTSTFDGLSL 710
Query: 893 AYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD 952
A+AT ++L +H +C LF THY ++ + +V +LT+ ++ D
Sbjct: 711 AWATAEHLAKHIRCYTLFATHYFELTQLADDLEHAVNV----HLTA--------TEHDDT 758
Query: 953 VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
+ +L+ V G + S+G +VA+LA +P I A + LE
Sbjct: 759 IVFLHNVHDGPASQSYGLQVAKLAGVPQDVIRNAKAQLSHLEG 801
>gi|414156453|ref|ZP_11412755.1| DNA mismatch repair protein mutS [Streptococcus sp. F0442]
gi|410870100|gb|EKS18059.1| DNA mismatch repair protein mutS [Streptococcus sp. F0442]
Length = 849
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 255/931 (27%), Positives = 428/931 (45%), Gaps = 168/931 (18%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K +P QQ +++K YPD L+ +G + F EDA AA++L I + ++
Sbjct: 4 EKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ L+ G+KV + +Q E P +A G R + + T T+
Sbjct: 64 MAGVPYHSAQQYIDVLIEQGYKVAIAEQME-------DPKEAKGVVKREVVQVITPGTVV 116
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ E+N+LV + D GN G+ +++ TG+
Sbjct: 117 DSTK-------PDSENNFLVAL-DRSGN---------------DYGLAYMDLVTGEFQVT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
ND + G + +L E++LG L +Q E++ ++ + VE A D + G
Sbjct: 154 TLNDFTMVCG---EIRNLRAREVVLGYELPEQEERVFVSQMNLLLS-HVETALDDVQLLG 209
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
D LS E + Q H++ M +L+ HLK
Sbjct: 210 ---------------DHLSELEKKTAGKLLQYVHQT------QMRELS---------HLK 239
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ A + ++M + T L++ N G ++G+L ++ T T G
Sbjct: 240 K----------AHHYEICDFLQMDFA--TKASLDLTENARTGKKHGSLYWYLDETKTAMG 287
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLR W+ PL D I R D + + H + SD+T
Sbjct: 288 GRLLRSWIQKPLVDLKRIQERQDIIQVFMD-------------HFFERSDLT-------- 326
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---------MQAILYAGKQLQQLHI 551
SL DI+R +R+ P + + + +++IL L I
Sbjct: 327 ------DSLKGVYDIERLASRVSFGKINPKDLLQLGDTLGHVPTIKSIL--------LGI 372
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSP---AVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ + ++ L RLI +A +P AVI + ++ T E DQ ++ +
Sbjct: 373 GDPVLDVLIARLDELPELHRLITSAIAPEASAVITEG-NIIRTGFDEQLDQYRVV--LRD 429
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KV 666
G +E+ AKE S I + ++ + V+ + L +PA+F K
Sbjct: 430 GTGWIAEI--------EAKEREASGITGLKIDYNKKDGYYFHVTN-SQLNHVPAHFFRKA 480
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
L ++ T++ R ++L A ++ A N E TI R +E G Y Q
Sbjct: 481 TLKNSERFGTEELARIEG-DMLEAREKSA--NLEYTIFMR-----IREEVGKYIQRLQQL 532
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDT 785
QA+A +D L +LA+++ ++ +RP+F HE +I I GRHPV++ ++ +++PN
Sbjct: 533 AQAIATVDVLQSLASVAESQQLIRPLF---HEERRIAIDKGRHPVVEKVMGAQSYIPNSI 589
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
+ E++ Q+ITGPNM GKS Y+RQ+A+I I+AQ+GS+VPA AEL + D IYTR+GA+
Sbjct: 590 FMDEEQD-IQLITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQKAELPIFDAIYTRIGAA 648
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D + G+STF+ E+ EA+ +R T QSL++ DELGRGT+T+DG+A+A + ++Y+ +
Sbjct: 649 DDLVSGQSTFMVEMMEANQAIRKATPQSLILFDELGRGTATYDGMALAQSIIEYIHDRTG 708
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ + + + HV+ L + D VT+L+K+ PG ++
Sbjct: 709 AKTLFATHYHELTALSETLS-RLENVHVATL-----------ERDGQVTFLHKIEPGPAD 756
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
S+G VA++A LP + + RA I KLE +
Sbjct: 757 KSYGIHVAKIAGLPEALLQRADAILTKLEGQ 787
>gi|421082973|ref|ZP_15543852.1| DNA mismatch repair protein mutS [Pectobacterium wasabiae CFBP
3304]
gi|401702199|gb|EJS92443.1| DNA mismatch repair protein mutS [Pectobacterium wasabiae CFBP
3304]
Length = 854
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 260/939 (27%), Positives = 408/939 (43%), Gaps = 184/939 (19%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ LK ++P++LL +G + F +DA+ A+++L I A A
Sbjct: 12 HTPMMQQYFRLKAEHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ RLV G V + +Q A GP R + + T T+
Sbjct: 72 GVPHHAVENYLARLVQMGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L + D G GF G ++IS+G E
Sbjct: 126 LLQEKQD------NLLAAIWQD------------GRGF----GYATLDISSGRFRVSEPA 163
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D R + A L +PAELL +
Sbjct: 164 D---RETMAAELQRTNPAELLYPESF---------------------------------- 186
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI--RHLKQ 381
E M L EN G R + PD A Q L L R L
Sbjct: 187 -ESMDLIEN-----------------RHGLRRRPLWEFE--PDTARQQLNLQFGTRDLTG 226
Query: 382 FGLERIM-------CL--------GASFRSLSG-SME-----MTLSANTLQQLEVLRNNS 420
FG+E+ CL S + G +ME + + A T + LE+ +N S
Sbjct: 227 FGVEQAKLALRAAGCLLQYAKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQNLS 286
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
G E TL +++ T+T GSR+L+RW+ P D + + R A+S + E
Sbjct: 287 GGVE-NTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQAISALQE---------- 335
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
+ P L + +G D++R + R+ RTA P + + A
Sbjct: 336 -------------ITPD----LQPYMRQVG---DLERILARLALRTARPRDLARMRHA-- 373
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG 600
QQ RE++ L + ++RL+ ++IG+ +L + + +
Sbjct: 374 -----FQQF---PAIREQLAP--LETDSVRRLV------SLIGQFDELRDLLERAVVEAP 417
Query: 601 DLL--NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITH 656
+L + +I+ G +E+ R A + LD L R++LG+ L+ F V G
Sbjct: 418 PVLVRDGGVIAPGYHAELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNGVHGYYI 477
Query: 657 LIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF 716
+ + VP+++ + + K RY PE+ D++ + + + +A +D
Sbjct: 478 QVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYDELFDLM 537
Query: 717 GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL 776
+ AE Q + ALA LD L LA + N+V P D +P I I GRHPV++ +L
Sbjct: 538 LPHLAELQQSATALAELDVLANLAERADTLNYVCPTLSD--KP-GIKITGGRHPVVEQVL 594
Query: 777 LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
+ F+ N +L +R IITGPNMGGKS Y+RQ ALI +MA +G FVPA A + +D
Sbjct: 595 REPFISNPLSLSPQRRML-IITGPNMGGKSTYMRQAALIVLMAHIGCFVPADQAVIGPVD 653
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
I+TR+GA+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A
Sbjct: 654 RIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWAC 713
Query: 897 LDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTY 955
+ L K M LF THY ++ + K G V + +D++ D + +
Sbjct: 714 AENLANRIKAMTLFATHYFELTTLPEKMEGVVNVH-------------LDAREHGDTIAF 760
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V G + S+G VA LA +P I RA +LE
Sbjct: 761 MHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLKELE 799
>gi|172087668|ref|YP_203917.2| DNA mismatch repair protein MutS [Vibrio fischeri ES114]
gi|110826510|sp|Q5E7G7.2|MUTS_VIBF1 RecName: Full=DNA mismatch repair protein MutS
gi|171902263|gb|AAW85029.2| methyl-directed mismatch repair protein [Vibrio fischeri ES114]
Length = 854
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 182/598 (30%), Positives = 301/598 (50%), Gaps = 73/598 (12%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ +N + G + TL I++HT T GSRLL+RW+ P+ ++++ RLDA
Sbjct: 268 LDAATRRNLEITQNLAGGFNH-TLAEILDHTSTAMGSRLLKRWLHQPVRTHDVLNQRLDA 326
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
+ E+ ES + ++ L ++G D++R + R+
Sbjct: 327 IGELKES-------------------------GLFADMAPQLKNIG---DVERILARLAL 358
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
R+A P + + A+ +QL +L S+T L+ A+S I
Sbjct: 359 RSARPRDLARLRNAL----QQLPEL-----------SQTTQEFQQDHLLTLAASAQPIDS 403
Query: 585 AAKLLSTVNKEAA-----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRK 639
+LL KE D G ++++G E+ + R A + L+ L R+
Sbjct: 404 ICELLERAIKENPPVVIRDGG------VLADGYNEELDQWRDLANGATQYLEKLEQEERE 457
Query: 640 QLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
+ + L+ + +V G I + K P ++ + + K RY PE+ D++ +
Sbjct: 458 RHDIDTLKVGYNNVHGFYIQISKGQSHKAPAHYVRRQTLKNAERYIIPELKEHEDKVLNS 517
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
+ + + W+ + + + Q+ A++ LD L LA + N+ RPV +
Sbjct: 518 KSKALAIEKRLWEELFDQLLPHLEQLQSMANAISELDVLSNLAERADTLNYCRPVLTKE- 576
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
I+I GRHPV++ ++ D F+ N L+ +R+ IITGPNMGGKS Y+RQ ALI +
Sbjct: 577 --TGINIEGGRHPVVEQVMSDPFIANPIKLNPDRKML-IITGPNMGGKSTYMRQTALIAL 633
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MA VG +VPA SAE+ LD I+TR+GASD + GRSTF+ E+ E + IL N T SLV++
Sbjct: 634 MAHVGCYVPADSAEIGTLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKHSLVLM 693
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
DE+GRGTST+DG+++A+A+ ++L M LF THY ++ ++ FTG + H+ +
Sbjct: 694 DEIGRGTSTYDGLSLAWASAEWLATKINAMTLFATHYFELTELPNLFTG-LANVHLDAV- 751
Query: 938 SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
+ ++ +++ V G + S+G VA LA +P S I +A LE+
Sbjct: 752 ----------EHGDEIAFMHAVQEGAANKSYGLAVASLAGVPKSVIKKAKQKLQHLES 799
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K+TP+ QQ + LK++ PD+LL +G + F +DA+ A+++L I +
Sbjct: 7 EKHTPMMQQYLRLKSENPDILLFYRMGDFYELFYDDAKRASQLLEISLTKRGSSAGEPIP 66
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
A IP + ++ +LV G V + +Q A GP R + + T T+
Sbjct: 67 MAGIPYHAVEGYLAKLVQQGESVAICEQVGDPAT------SKGPVERKVVRIVTPGTV 118
>gi|407844416|gb|EKG01956.1| mismatch repair protein MSH3, putative [Trypanosoma cruzi]
Length = 943
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 206/657 (31%), Positives = 326/657 (49%), Gaps = 93/657 (14%)
Query: 378 HLKQFGLERI---MCL--------GASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
+L + L R+ MCL A+ S++G ME L +TL L++ ++S G++ G
Sbjct: 333 YLAPYRLNRVYEKMCLEAGQTLPRNAAIDSVTGKME--LPGSTLSALDIF-HSSIGAK-G 388
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L+ +++H+LT G R LR W++ P C+ N I+AR AVS + H E
Sbjct: 389 SLMALLDHSLTTPGVRRLRLWLSEPPCEMNTITARRKAVSFLL--------------HGE 434
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
++ VT +L R DI+ + ++ + + +E+I +++A+
Sbjct: 435 DDNTVT-----------HLLRECARFGDIEATLGKMRAQRCSVAEYIQLLRAL------- 476
Query: 547 QQLHIDGEYREKVTSKTLHSALLKR-------LILTASSPAVIGKAAKLLSTVNKEAADQ 599
T+ TL A+L R LIL + A + E
Sbjct: 477 ------------ETAHTLAHAVLSRNDGRIDNLILETLQRVTSAETANFIQLCKCEMESH 524
Query: 600 GDLLNLMIISNGQFSEVARARKAVQSAKEE----LDSLINMCRKQLGMRNLEFMSVSGIT 655
S+G V A +A +A++E LD + R+ L M +LE+ +++G
Sbjct: 525 ATSPLEYFTSHG--VSVPSAMQAHLTARDEALHALDEELEYIRQTLHMPDLEYRTIAGTP 582
Query: 656 HLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
++++P +VP +W + TK +R+H+P ++ L A E L I + AW
Sbjct: 583 FVVDVPQAKCNRVPKDWLLLTRTKSHVRFHTPNIVDRNVLLCSARERLLIAAKDAWQQKQ 642
Query: 714 KEFGG---YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
E FQA + A+A LD + L S ++ +V P D + I GRHP
Sbjct: 643 DELSNSSLAMNAFQAVIDAVAVLDAIRCLTVTSSSRGYVAPELSDG--ATCLKIVGGRHP 700
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
VLD IL +V D L + I+TGPNMGGKS +R V IMAQ+G +VPA++A
Sbjct: 701 VLDNILRGGYVSCDFCLAKGGAW--ILTGPNMGGKSALMRMVGAFVIMAQLGCYVPATAA 758
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC-TAQSLVIVDELGRGTSTHDG 889
+L + +Y RMGASDS+ +G STFL+E+ E S ILR+ + SLV++DELGRGTS+ DG
Sbjct: 759 QLPLFTAVYCRMGASDSLLEGTSTFLKEMQETSRILRSPRVSSSLVLLDELGRGTSSFDG 818
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIADI---KTKFTGSVGTYHVSYLTSHKVMGPMD 946
+A+A ATL+YLL+ M LFVTHY + + T V Y++ + +
Sbjct: 819 IAVAAATLEYLLQRGTTM-LFVTHYSHLCEPYLHNTSEGKQVSCYYMGFSEEQD-----E 872
Query: 947 SKSDQD--VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
+ D++ + + YK PGV+ SSFG +VA++A LP ++ A ++ E E +R+
Sbjct: 873 ERGDREPKLVFTYKPTPGVTPSSFGVRVARMAGLPHDVVAEAQRLSEMEERENMTRM 929
Score = 87.0 bits (214), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 90 TPLEQQVVELKTKYP-DVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
TPLE+QVV LK P DV+LM+ GY+ +F+G D+ +A++ GI F ++S+P
Sbjct: 38 TPLEKQVVSLKESLPPDVVLMVACGYRVKFYGRDSRVASRRFGIMCIGTTPFESSSVPYV 97
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
R+N++V RLV G++V Q E A+I+A+ G F R ++ + ++ TL +E +G
Sbjct: 98 RVNLYVHRLVAMGYRVAFADQ-ENASIRANSGTAKGIFTREITRVCSRGTLLPSEVIG 154
>gi|309803573|ref|ZP_07697665.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV 11V1-d]
gi|308164321|gb|EFO66576.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV 11V1-d]
Length = 854
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 248/955 (25%), Positives = 430/955 (45%), Gaps = 157/955 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + G+ G+ ++STG+
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSS------------SQGW----GLTYCDLSTGESYAT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ + LLSL EL+ G+ L+ E++ L AG + V+ +
Sbjct: 154 HLTSWEM---IVNELLSLQTRELVYGETLTSD-EQIFLKKAGITLSQPVKLS-------- 201
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
G AEV V +Q +++ I + + ++ HL+
Sbjct: 202 GEHAEVSY-------------------VTQQLHNQLEIAATKQLLAYLLATQKRSLAHLQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+S + + +S LE++++ G + G+L +++ T T G
Sbjct: 243 ------------VTQSYEPNQYLQMSHIVQTNLELIKSTKTGKKMGSLFWLLDKTSTAMG 290
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL+ W+ PL + I +R V+ + + Y+
Sbjct: 291 GRLLKSWIERPLISLSEIKSRQLVVTALFDD---------------------------YF 323
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDGEY 555
++ L D++R R+ +A E + + ++ + + L + +
Sbjct: 324 SREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLNNF 383
Query: 556 REKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+K+ K +H ++K ++ +P LST KE II +G S
Sbjct: 384 AQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKSGVSS 421
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN-WA 671
++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+ +
Sbjct: 422 QLDRYRDAMINGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKNKVPLDRYM 481
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY + E+ + A + T + + + ++ Y Q + L+
Sbjct: 482 RKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQLS 541
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAE 790
+LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND + E
Sbjct: 542 SLDVLATFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD-E 598
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 599 QTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFDKIFTRIGAGDDLIS 658
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ E++EA+ L+N T +SL++ DE+GRGT+T+DG+A+A A + YL + LF
Sbjct: 659 GKSTFMVEMSEANIALKNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKTLF 718
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ D+ + + HV ++ + + +L+K++PG ++ S+G
Sbjct: 719 ATHYHELTDLDQEL-AHLKNIHVG-----------ATQENGHLIFLHKILPGAADQSYGI 766
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
VAQLA LP + AT + +LE ++V + DL K+SD+EQ+
Sbjct: 767 HVAQLAGLPTKVLREATHMLKQLEKNSDNQVAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|387127529|ref|YP_006296134.1| DNA mismatch repair protein MutS [Methylophaga sp. JAM1]
gi|386274591|gb|AFI84489.1| DNA mismatch repair protein MutS [Methylophaga sp. JAM1]
Length = 849
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 257/965 (26%), Positives = 424/965 (43%), Gaps = 186/965 (19%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTA 143
T +TP+ QQ + +K ++P++LL +G + F +DA AA++L I N A
Sbjct: 2 TEKTNHTPMMQQYLRIKAEHPELLLFYRMGDFYELFFDDAHKAAELLDITLTARGNSNGA 61
Query: 144 SIPTFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
IP + H + RL+ G V + +Q A GP R + + T T
Sbjct: 62 PIPMAGVPYHAAEGYLARLLKGGVAVAICEQIGDPATSK------GPVERKVVRVLTPGT 115
Query: 199 L--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTG- 255
L EA D + N LV + + G+ EIS+G
Sbjct: 116 LTDEALLD--------SKQENLLVAIARHKD----------------QYGLAVAEISSGR 151
Query: 256 -DVVYGEFNDGFLRSGLEAVLLSLSPAELLL----GQPLSKQTEKMLLAYAGPASNVRVE 310
DV + L A L L PAE+L+ G L+ ++ L Y P + ++
Sbjct: 152 FDVCQHQSLTDLL-----ADLARLQPAEILIDDSHGDTLNSYNKQ--LKYV-PEWHFGLD 203
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
A R L E+ G L ++ + AI + + A Q
Sbjct: 204 AARR-------------RLCEHFGTTDLKGFGCDDLPL--------AIMAAGCLLNYAQQ 242
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
+ L++ +E + + + + + + LE+ +N S G E TLL
Sbjct: 243 THRTALPQLRKISVE------------TPADSIRIDPQSRRNLELEQNLSGGCE-NTLLS 289
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
++++T+T G+RLLRRW+ P D + R A+
Sbjct: 290 VLDNTVTPMGTRLLRRWLLQPKRDLTTLQQRQAAIG------------------------ 325
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
++E + ++L LG DI+R +TR+ +A P +F+
Sbjct: 326 -NLIEQDVIAAVQTLLKPLG---DIERIVTRVALSSARPRDFV----------------- 364
Query: 551 IDGEYREKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM--- 606
+ R +T+ LH +L G A+LL +++E +LL L+
Sbjct: 365 ---QLRRMLTALPNLHQSL-------------SGTQARLLKQIDRELGTFPELLELLNRA 408
Query: 607 -------------IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSV 651
+I+ G +E+ R R +A + L +L R++ G+ L+ + V
Sbjct: 409 IIEEPPALIRDGGVIAEGYHAELDRLRNLHLNANDFLRNLEQRERERTGVSTLKVGYNKV 468
Query: 652 SGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDS 711
G I N ++P ++ + + K RY + E+ T DQ+ A+E+ + ++ ++
Sbjct: 469 HGFFIEISRAHNIELPADYQRRQTLKNAERYITAELKTHEDQVLSASEKALALEKSLYEE 528
Query: 712 FLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPV 771
K A ALA LD L L+ ++ N+V P + + I +GRHPV
Sbjct: 529 LFKLIHPELAALTYCAAALAELDVLTNLSERAQTLNYVAPQLTAEQS---LSIQAGRHPV 585
Query: 772 LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
++ + +F PND L + +ITGPNMGGKS Y+RQ ALI IMA +GS+VPA SA
Sbjct: 586 VEAVQKTHFCPNDLQL--TEQSMLVITGPNMGGKSTYMRQTALIAIMAYMGSYVPADSAV 643
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
+ +D I+TR+GASD + GRSTF+ E+NEA+ IL N +AQSLV++DE+GRGTST DG+A
Sbjct: 644 IGPIDQIFTRIGASDDLASGRSTFMVEMNEAANILNNASAQSLVLMDEVGRGTSTFDGLA 703
Query: 892 IAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
+A++ + L+ LF THY ++ + + + + +D+
Sbjct: 704 LAWSCAEKLVRDIGAYTLFATHYFEMTQLPGLYDKACNVH-------------LDAIEHG 750
Query: 952 D-VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE--VSSRVQNRSAKR 1008
D + +L+++ PG + S+G +VAQLA +P I A A LE + V + + + +
Sbjct: 751 DKIVFLHQLKPGAANQSYGLQVAQLAGVPNDVIQAAKHKLAALETQRTVGTNLHEQPPQH 810
Query: 1009 DLLVK 1013
DL +
Sbjct: 811 DLFAQ 815
>gi|302414500|ref|XP_003005082.1| DNA mismatch repair protein Msh3 [Verticillium albo-atrum VaMs.102]
gi|261356151|gb|EEY18579.1| DNA mismatch repair protein Msh3 [Verticillium albo-atrum VaMs.102]
Length = 972
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 291/578 (50%), Gaps = 85/578 (14%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------------ 133
NKK TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AA+ L I
Sbjct: 343 NKKLTPMEIQFLDIKRKHMDTVLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHP 402
Query: 134 --AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS 191
+HLD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L+
Sbjct: 403 SESHLDR-FASASIPVHRLPVHAKRLVAAGHKVGVVRQLETAALKKAGDNRNAPFVRKLT 461
Query: 192 ALYTKATL--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGV 247
+YTK T E E GE+G + YL+C+ + G G D V +G+
Sbjct: 462 NVYTKGTYIDENGELDSQGENGAPA-AGYLLCITETPSK---------GQGTDEKVDVGI 511
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
VAV+ +TGD++Y F DGF+RS +E LL +SP E ++ L+K T+KM+ +G ++NV
Sbjct: 512 VAVQPATGDIIYDNFEDGFMRSEIETRLLHISPCEFVIVGDLTKGTDKMIRHLSGSSTNV 571
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL 367
+ Y + +DT + + G ++ ++++P+
Sbjct: 572 ---------------FGDRSRFYADKMKDTAAESA-------ANGTAVLLLDKVLHLPEA 609
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
L+ I HLK++GLE I L F+S + M ++ +TL+ LEV RN+++ +E+G+
Sbjct: 610 VTICLSAMITHLKEYGLEHIFDLTKYFQSFTTRQHMLINGSTLESLEVYRNSTDHTEHGS 669
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
L ++ T T +G RLLR+WV PL D + + R+ AV EIA G+ + +
Sbjct: 670 LFWALDKTSTRFGQRLLRKWVGRPLLDDSQLEERVAAVEEIANGQGTPQVDK-------- 721
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
L ++L S+ D++R + R+++ + E +AV+Q++ Q
Sbjct: 722 --------------LEALLVSI--KTDLERSLIRMYYAKCSRPELLAVLQSLQRIATQYA 765
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
+ + S + +ALL S P ++ L +N EAA + D N
Sbjct: 766 TIKTASDI--GFDSPLIANALL-------SLPHILDTIISYLDKINPEAARKDDKYNFFR 816
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
+ Q ++ + + + ++ELD +LG +
Sbjct: 817 EAE-QNEDIQDFKMGIVAVEQELDEHRRDAAAKLGRKK 853
>gi|91082687|ref|XP_971522.1| PREDICTED: similar to DNA mismatch repair protein muts [Tribolium
castaneum]
Length = 1079
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 272/983 (27%), Positives = 445/983 (45%), Gaps = 121/983 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P P TL IP + +K TP +Q LK+ + D +L +VG + +
Sbjct: 151 RRPDDPDYDPRTLY-IPQ-----SFLEKQTPAMRQWWVLKSTHMDSVLFFKVGKFYELYH 204
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTET---AAIKA 177
DA + LG ++++ F + P + L+ GFKV +QTET A +
Sbjct: 205 MDAVVGVTQLG-FSYMKGEFAHSGFPESAYHKMANALIEKGFKVARTEQTETPEMMAERC 263
Query: 178 HGPGKAGPF----GRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
G+A F R + + TKAT + D +S Y+ + + D
Sbjct: 264 KKQGRATKFDKVVNREICQISTKATCVYTAQL---PDAMHSQSCYMYAIAEKDVT----- 315
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT 293
G R G+ ++ S G EF+D S L V LS P L+L + K +
Sbjct: 316 ------GSQRRFGICFIDTSIGVFKLAEFDDDKHCSKL-LVCLSEYPPGLILTER-KKLS 367
Query: 294 EKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGN 353
K+ L +VR E + + G + + E + NE ++ +PE
Sbjct: 368 SKLKLILNTNYRDVRRESLAPESQFYGAS-----TTIEKLLNGNYFRNESNDLCLPEV-- 420
Query: 354 HRSAIEGIMNMPD--LAVQALALTIRHLKQFGLE-RIMCLGA---------SFRSLSGSM 401
++ +G P+ L V+AL + +L L+ +++ LG + R S
Sbjct: 421 LKNVTDGYNAKPEFELMVKALGGCLWYLHDSKLDIQVVSLGKFEIYQPLEMNVREKSPRS 480
Query: 402 EMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISAR 461
M L + T+ L +L E +L +++ T +G RLL +W+ PLC I R
Sbjct: 481 CMILDSVTIVNLNLL------GEENSLQKTLDYCQTAFGKRLLTQWICRPLCVVEKIKER 534
Query: 462 LDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITR 521
+AV E+ ++ + ++ V L + PD++R + +
Sbjct: 535 QEAVQELVKNTSLLKDAQDV---------------------------LKKLPDLERQLAK 567
Query: 522 I------FHRTATPSEFIAVMQAILYAGKQLQQL--HIDG-EYREKVTS--KTLHSALLK 570
I F P +A Y+ +++ L + G E + + K S+LLK
Sbjct: 568 IHTYGNKFFAQDHPDSRAVFYEAATYSKRRIGDLLKTLQGFELAQNLCPLFKGCQSSLLK 627
Query: 571 RLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN--LMIISNGQFSEVARARKAVQSAKE 628
RL + LL K A DQ + +I G +A+ A+++ +
Sbjct: 628 RLTQFKPDGHYVDLTELLL--FFKHAFDQEEAQKEGKIIPKPGVDENYDQAQDAIKAVTK 685
Query: 629 ELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFKVPLNWAKVNSTKK----TIRYH 683
+LD + ++ G + + + I++P ++ K + ++ TKK + RY
Sbjct: 686 KLDEYLVELQQFFGCK-VTYFGSDKKRFQIDIPESHTKKVTSEYQLEGTKKGAKPSKRYS 744
Query: 684 SPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLS 743
+ L ++ A E V + ++F +++ A+ + LD L +LA +
Sbjct: 745 TSRSRQLLAEMMKAESERAKVIQDLNRRIFQKFSEKREQWEQAIDCITVLDVLCSLAQYA 804
Query: 744 RNKNFVRPVFVDDHEPV----QIHICSGRHPVLDTILLDNFVPNDTNLH-AEREYCQIIT 798
NF + + + + EP+ +I I +GRHP + I DNFVPNDT + A+ +IT
Sbjct: 805 --CNFGQDICIPEIEPMGNSDKIVIENGRHPCITNI--DNFVPNDTKMGVADFANILLIT 860
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNMGGKS +RQ+A+I IMA +G +VPAS L ++D I+TR+GA D I QG+STFL E
Sbjct: 861 GPNMGGKSTLMRQIAIICIMAHMGGYVPASGCTLSLIDRIFTRLGAHDDIVQGQSTFLVE 920
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA 918
L+EA+ +L + T SLV++DELGRGTSTHDG AIA A ++ L C LF THY +
Sbjct: 921 LSEAAVMLHHATPHSLVLLDELGRGTSTHDGNAIATAYVEKLTT-INCRTLFSTHYHSLV 979
Query: 919 D-IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
D + + +G H++ + + D +++ VT+LYK+ G S+GF VA+L+
Sbjct: 980 DHFEARRDVQLG--HMACMVEND-----DDPTEESVTFLYKMARGRCPKSYGFNVARLSG 1032
Query: 978 LPPSCISRATVIAAKLEAEVSSR 1000
L +SR I+ +LE E SR
Sbjct: 1033 LKHCIVSRGREISKQLENESKSR 1055
>gi|85713673|ref|ZP_01044663.1| MutS 1 protein [Nitrobacter sp. Nb-311A]
gi|85699577|gb|EAQ37444.1| MutS 1 protein [Nitrobacter sp. Nb-311A]
Length = 908
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 263/964 (27%), Positives = 436/964 (45%), Gaps = 171/964 (17%)
Query: 75 PIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY- 133
PI + + TP+ +Q +E+K P +LL +G + F EDAE+A++ LGI
Sbjct: 8 PISPNPAAPAEAARVTPMMEQYLEIKAANPGLLLFYRMGDFYELFFEDAEIASRALGITL 67
Query: 134 ----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRG 189
H + +P R + ++ RL+ AG +V V +QTE + A G R
Sbjct: 68 TKRGKHQGADIPMCGVPVERSDDYLHRLIAAGHRVAVCEQTEDPS-AARKRGNKSVVRRD 126
Query: 190 LSALYTKATLEAAEDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGV 247
+ L T TL ED +NYL+ + + R D R +
Sbjct: 127 VIRLVTPGTLT--------EDTLLDARANNYLLAL-------ARARASSDAD----RFAL 167
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
++IST + + E S L A L ++P E+++ L +L P+
Sbjct: 168 AWIDISTAEFMVTECGA----SELAATLARINPNEVIVSDALHGDPGLNVLLRELPS--- 220
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL 367
V +RD F G A + + + ++G+ M L
Sbjct: 221 -VTPLTRDVFDGATAEQRLCDYFAV-----------------------ATMDGLSAMSRL 256
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
A A + ++ + + + L R SGS M + T LE+ R + G G+
Sbjct: 257 EATAAAAAVTYIDRTQIGQRPPLSPPSREASGST-MAIDPATRANLELTRTLA-GERRGS 314
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL ++ T T GSRLL + + PL D I+ RLDAV+ TS++ + D
Sbjct: 315 LLDAIDRTTTAAGSRLLAQRLAAPLTDTAAITRRLDAVAAF--------TSDNTARDD-- 364
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
+ ++L + +PD+ R + R+ P + + I+ A + L
Sbjct: 365 --------------IRAILRT---APDMSRALARLSLGRGGPRDLAGLRDGIMAADQALT 407
Query: 548 QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ-----GDL 602
+L E+ + P I A + L ++E A + +
Sbjct: 408 RL---AEFPDP--------------------PEDIAAAMQGLRRPSRELARELGNALSES 444
Query: 603 LNLM-----IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL 657
L LM + G + + ARK ++ + ++ ++ G++ L+ + + +
Sbjct: 445 LPLMKRDGGFVREGYHAALDEARKLRDDSRLVVAAMQARYAEETGVKTLKIRHNNVLGYF 504
Query: 658 IELPANFKVPLNWAKVNST---KKT----IRYHSPEVLTALDQLALANE-----ELTIVC 705
+E+ A L A +N+T ++T +R+ + E+ ++A A E EL I
Sbjct: 505 VEVTAQHADRLMSAPLNATFIHRQTLAGQVRFTTSELGEIEARIANAGERALGLELEIFE 564
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHIC 765
R A + + G E + A A A LD ALATL+ ++N+ RP VD + I
Sbjct: 565 RLAGMAI--QNGD---EIRNAAHAFAQLDVAAALATLAIDENYTRPE-VD--ASLGFAIE 616
Query: 766 SGRHPVLDTILLDN---FVPNDTNLHA----EREYCQIITGPNMGGKSCYIRQVALIGIM 818
SGRHPV++ L F+ N +L ++TGPNM GKS ++RQ ALI +M
Sbjct: 617 SGRHPVVEQALKRTGQPFIANACDLSPGPGQTSGQVWLLTGPNMAGKSTFLRQNALIALM 676
Query: 819 AQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVD 878
AQ+GSFVPA A + ++D +++R+GA+D + +GRSTF+ E+ E + IL + ++LVI+D
Sbjct: 677 AQIGSFVPARRARIGMIDRLFSRVGAADDLARGRSTFMVEMVETAVILNQASERALVILD 736
Query: 879 ELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF------TGSVGTYH 932
E+GRGT+T DG++IA+AT+++L E +C LF THY ++ + K T V +H
Sbjct: 737 EIGRGTATFDGLSIAWATIEHLHESNRCRALFATHYHELTALSAKLPRLFNATVRVKEWH 796
Query: 933 VSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAK 992
+V +L++V+PG ++ S+G +VA+LA LPPS I+RA + AK
Sbjct: 797 ------------------GEVIFLHEVLPGAADRSYGIQVARLAGLPPSVIARAKSVLAK 838
Query: 993 LEAE 996
LEA+
Sbjct: 839 LEAQ 842
>gi|297205602|ref|ZP_06922998.1| DNA mismatch repair protein MutS [Lactobacillus jensenii JV-V16]
gi|297150180|gb|EFH30477.1| DNA mismatch repair protein MutS [Lactobacillus jensenii JV-V16]
Length = 860
Score = 270 bits (690), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 257/949 (27%), Positives = 429/949 (45%), Gaps = 158/949 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TP+ +Q ++K++YPD L VG + F +DA A++L + N A
Sbjct: 5 TPMMKQYYDIKSQYPDAFLFYRVGDFYELFEDDAVKGAQILELTLTHRSNKSENPIPMAG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P ++ +V LV G+KV + +Q E P +A G RG+ L T T+
Sbjct: 65 VPHQAVDSYVNTLVEKGYKVALCEQLE-------DPKQAKGMVKRGIIQLVTPGTM---- 113
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ G +G ESNYL V G ++ D+ GE
Sbjct: 114 -MNEGPNGAK-ESNYLTSVFSTKSGFG---------------------LAYSDLSTGEIF 150
Query: 264 DGFLRSGLEAV--LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L+S + + LLSL E++ LS + +L SN+ V +D
Sbjct: 151 TTHLKSFADVLNELLSLRTKEVVFEGSLSDSQKDVL-----KKSNITVSTPIQDQ----E 201
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
AEV + LSN ++ D +Q L + L R L
Sbjct: 202 KHAEVSYAIQK-----LSNQAEK--DATKQ---------------LVIYLLVTQKRSLAH 239
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ + S S + +S LE++ + G + G+L +++ T T G
Sbjct: 240 LQIAK---------SYEVSQYLQMSHVVQNNLELVASAKTGKKMGSLFWLLDKTNTAMGG 290
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL++W+ PL ++SEI EK + Y+
Sbjct: 291 RLLKQWLARPLL----------SISEI-----------------EKRQKIVQAMLDNYFT 323
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID------GEY 555
V +L D++R RI +A E + + ++ L A Q+Q + +
Sbjct: 324 REGVKDALKGVYDLERLTGRIAFGSANARELLQLSRS-LDAIPQIQSALFESGDEDLANF 382
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
E++ + + +K I+ +P ++ D G +I G +
Sbjct: 383 AEQIIDLSELAKKIKDTIV--ENPPIL-------------TTDGG------LIREGINEQ 421
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLN-WAK 672
+ R R A+ + K L L RK G+ NL+ + I++ KVP + +
Sbjct: 422 LDRYRDAMNNGKTWLAQLQAQERKATGIENLKIGYNKVFGYFIQVSKGNVAKVPEGRYIR 481
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQALA 731
+ + RY +PE L + L L E + S L+E+ + + Q +A
Sbjct: 482 KQTLTGSERYITPE-LKEHENLILEAENKSTDLEYQIFSDLREYIKTFIPKLQELGNTIA 540
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAE 790
+LD L + AT++ N+ RP F D + +I + +GRHPV++ +L D +++PND + A+
Sbjct: 541 SLDALTSFATVAEENNYCRPSFHQDSQ--EIKVVAGRHPVVEKVLADGSYIPNDIQM-AD 597
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ITGPNM GKS Y+RQ+ALI +MAQVGSFVPA+ A L + D I+TR+GA+D +
Sbjct: 598 DTSVFLITGPNMSGKSTYMRQMALIAVMAQVGSFVPATEAALPIFDQIFTRIGAADDLIS 657
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ E++EA+ L+N T +SLV+ DE+GRGT+T+DG+A+A A + YL + LF
Sbjct: 658 GQSTFMVEMSEANEALQNATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKTLF 717
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ D++ K + HV ++ + + +L+K++PG ++ S+G
Sbjct: 718 ATHYHELTDME-KTLDHLKNIHVGA-----------TQENGKLIFLHKILPGPADQSYGI 765
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQ 1019
VAQLA LP + A+ + +LEA+ ++ ++ S + DL + +D E+
Sbjct: 766 HVAQLAGLPNKVLREASKMLKRLEAQGANGLEPASLQLDLFNEKNDSEE 814
>gi|402307624|ref|ZP_10826646.1| DNA mismatch repair protein MutS [Prevotella sp. MSX73]
gi|400378336|gb|EJP31194.1| DNA mismatch repair protein MutS [Prevotella sp. MSX73]
Length = 879
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 264/929 (28%), Positives = 431/929 (46%), Gaps = 144/929 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT------ASIPT 147
+Q ++K+K+P+ LL+ G + + EDA AA+VLGI +N + A P
Sbjct: 3 RQFFDMKSKHPEALLLFRCGDFYETYCEDAVEAARVLGITLTRRNNGGSTAVTEMAGFPH 62
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSALYTKATLE 200
L+ ++ +L+ AG +V + Q E K GK G RG++ L T
Sbjct: 63 HALDTYLPKLIRAGKRVAICDQLEDPKKKREQIKGKKGLSEMDKMVKRGITELVTPG--- 119
Query: 201 AAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
V G++ E+N+L V FG G GV ++ISTG+ +
Sbjct: 120 ----VAMGDNVLNYKENNFLAAVH-------------FGKG---ACGVSFLDISTGEFLT 159
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
GE ++ E +L + P E+L + + E+ Y G R D ++
Sbjct: 160 GEGTYDYV----EKLLGNFQPKEVLYDRARKQDFER----YFG----TRFCTFELDDWVF 207
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
A L ++ G +L + V N A IM +L I L
Sbjct: 208 TDQSAR-QKLLKHFGTKSL-----KGFGVDHLKNGVIASGAIMQYLELTQHTHIGHITAL 261
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ ++ + L +A +L+ L+ ++ + +LL +++ T+T
Sbjct: 262 ARIEEDKFVRLDK------------FTARSLELLQPMQEDGL-----SLLDVIDRTVTPM 304
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLRRW+ PL D I+ RLD V D +P F
Sbjct: 305 GSRLLRRWMVFPLKDVRPINERLDIV------------------------DYFFKKPDFR 340
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
+ +G D++R I+++ +P E + + A L A + + K+
Sbjct: 341 ACVDEEFHRMG---DLERIISKVAVGRVSPREVVQLKNA-LTAIRPV-----------KM 385
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA-DQGDLLNLM-IISNGQFSEVA 617
+ + LKR+ + L ++KE D LLN +I++ E+
Sbjct: 386 ACLSAGNEALKRV------GEQLSLCESLRDRIDKEIQPDPPQLLNKGDVIADNYSPELD 439
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFK--VPLNWAKV 673
R + K+ L + ++ G+ +L+ F +V G + +E+ FK VP W +
Sbjct: 440 ELRSISRHGKDYLLEIQQREIEKTGITSLKVGFNNVFG--YYLEVRNTFKDKVPEEWVRK 497
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ + RY + E+ +++ A+E++ ++ ++ + + + Q +A L
Sbjct: 498 QTLAQAERYITQELKEYEEKILGADEKIIMLETKLFNELILAMQEFIPQIQIDANLVAHL 557
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAER 791
DCL + A S +VRP +D+ E + I GRH V++T L + +VPND L +
Sbjct: 558 DCLLSFAKTSEEHRYVRPT-IDESEVLDIK--QGRHAVIETQLPIGEQYVPNDVYLDTVK 614
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
+ +ITGPNM GKS +RQ ALI ++AQVG FVPA SA + ++D I+TR+GASD+I G
Sbjct: 615 QQVMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAESARIGLVDKIFTRVGASDNISLG 674
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVL 909
STF+ E+ EAS IL N + +SLV+ DELGRGTST+DG++IA+A ++YL EH K L
Sbjct: 675 ESTFMVEMTEASNILNNVSGRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPKARARTL 734
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ +++ F + Y+VS + ++ K V +L K+ G SE SFG
Sbjct: 735 FATHYHELNEMEKNFP-RIKNYNVS-------VKELNGK----VIFLRKLERGGSEHSFG 782
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVS 998
VA++A +P S + RA VI +LEA+ S
Sbjct: 783 IHVAEIAGMPRSIVKRANVILKQLEADNS 811
>gi|147669669|ref|YP_001214487.1| DNA mismatch repair protein MutS [Dehalococcoides sp. BAV1]
gi|189030713|sp|A5FQC0.1|MUTS_DEHSB RecName: Full=DNA mismatch repair protein MutS
gi|146270617|gb|ABQ17609.1| DNA mismatch repair protein MutS [Dehalococcoides sp. BAV1]
Length = 858
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 273/955 (28%), Positives = 447/955 (46%), Gaps = 165/955 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFM-------T 142
TPL +Q +++K YP+ ++ +G + F EDA +AA+ L I L M
Sbjct: 5 TPLRKQYLDIKKNYPEAIVFFRLGDFYETFEEDARIAARELEIV--LTSREMGKGLKVPL 62
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
A IP L+ ++ RL+N G+KV + +Q PG+ G R ++ L T T+
Sbjct: 63 AGIPYHALDNYLSRLINKGYKVAICEQVTK-------PGETKGLVQRQVTRLVTPGTVVE 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ ++ N+L+ + + + G F D IST + +
Sbjct: 116 PNLLQTKQN------NFLLSLYLTEDSCGL----AFAD------------ISTSEFGCTQ 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N G LEA + LSPAE++L + Q+ + + +++ + D +
Sbjct: 154 TNIG----ELEAEISRLSPAEIILPK---NQSLNLPI-------HLKATISKLDGYYFEA 199
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+A E L + E QN+ G NMP LA+ A + +L++
Sbjct: 200 DIAR---------EHLLRHFECQNLSA----------YGCENMP-LAISAAGALLNYLEE 239
Query: 382 FG------LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
LER+ S + + M+M ++TL LE+ R++ S G+LL I++ T
Sbjct: 240 TQKSSLKQLERL-----SVYTTADYMQM--DSHTLSNLEIFRSSGGNSLKGSLLGILDQT 292
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G RLLR+++ PL ++ I RL AV Y ES+ +
Sbjct: 293 RTAMGGRLLRKFLGQPLLKQSDIEKRLSAVD--------YFFEESLAR------------ 332
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
+S+ SLG+ D++R RI +T P E I++ ++
Sbjct: 333 -------TSLAKSLGQIADMERMANRIRQKTILPRELISLKNSL---------------- 369
Query: 556 REKVTSKTLHSALLK--RL--ILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIIS 609
E V++ L+ RL L P ++L +NK D L + +I
Sbjct: 370 -ETVSAIHRQFGLMPPPRLAYFLNGLKPL-----PEMLDIINKTITDDPPSTLGDGKVIR 423
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVP 667
G E+ + A+ L + R++ G+++L+ + IE+ AN +P
Sbjct: 424 AGFDPEMDKLCSLAGDARTFLSQMETRERERTGIKSLKLGYNRVFGYYIEISNANLGDMP 483
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+ + + R+ +PE+ + + A E L + ++ L + GG+Y+ A
Sbjct: 484 PEFIRKQTLVNAERFITPELKEYENLILNAKERLLEMETGLYEQVLNQLGGFYSALLANA 543
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTN 786
ALAALD L A A ++ ++VRPVF H ++ I GRHP+++ L +FV ND +
Sbjct: 544 AALAALDVLSAFAEVAVRNSYVRPVF---HPENRLDIRKGRHPMVEQGLGYGSFVANDIS 600
Query: 787 LHAEREYCQII--TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
L AE CQII TGPNM GKS Y++Q ALI +MAQ+GS+VPA +AEL + D I+TR+GA
Sbjct: 601 LSAED--CQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFTRIGA 658
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+ + G+STF+ E+ E + IL T++SL+I+DE+GRGTST+DG+AIA A ++Y+
Sbjct: 659 REDLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQP 718
Query: 905 K--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
LF THY ++ ++ SYL K S+ +V +L+K+VPG
Sbjct: 719 SLTAKTLFATHYHELVEL------------ASYLPRVKNYNIAVSEDRGEVVFLHKIVPG 766
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
+ S+G VA+LA LP I RA + +LE + ++R+ + L + ++ Q
Sbjct: 767 GVDKSYGIHVAKLAGLPKWVIKRAYEVLTELENPAKKQPKSRTCQPQLQLPMTGQ 821
>gi|417918056|ref|ZP_12561609.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis SK236]
gi|342829047|gb|EGU63408.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis SK236]
Length = 857
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 257/963 (26%), Positives = 444/963 (46%), Gaps = 175/963 (18%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K +P QQ +++K YPD L+ +G + F EDA AA++L I + ++
Sbjct: 4 EKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ L+ G+KV + +Q E P +A G R + + T T+
Sbjct: 64 MAGVPYHSAQQYIDVLIEQGYKVAIAEQME-------DPKEAKGVVKREVVQVITPGTVV 116
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ E+N+LV + D GN G+ +++ TG+
Sbjct: 117 DSTK-------PDSENNFLVAL-DRSGN---------------EYGLAYMDLVTGEFQVT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
ND + G + +L E++LG L +Q E++ ++ + VE A D + G
Sbjct: 154 TLNDFSMVCG---EIRNLRAREVVLGYELPEQEERVFVSQMNLLLS-HVETALDDVQLLG 209
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
L+E+ ++A + + + ++ L+ HLK
Sbjct: 210 DQLSEL--------------------------EKKTAGKLLQYVYQTQMRELS----HLK 239
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ A + ++M + T L++ N G ++G+L ++ T T G
Sbjct: 240 K----------AHHYEICDFLQMDFA--TKASLDLTENARTGKKHGSLYWYLDETKTAMG 287
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLR W+ PL D I R D + + H + SD+T
Sbjct: 288 GRLLRSWIQKPLVDLKRIRERQDIIQVFMD-------------HFFERSDLT-------- 326
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---------MQAILYAGKQLQQLHI 551
SL DI+R +R+ P + + + +++IL L I
Sbjct: 327 ------DSLKGVYDIERLASRVSFGKINPKDLLQLGDTLGHVPTIKSIL--------LGI 372
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSP---AVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ + ++ L RLI +A +P AVI + + + + DQ D L++
Sbjct: 373 GDPVLDVLIARLDELPELHRLITSAIAPEASAVITEGNIIRTGFD----DQLDQYRLVLR 428
Query: 609 S-NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--K 665
G +E+ AKE S I + ++ + V+ + L +PA+F K
Sbjct: 429 DGTGWIAEI--------EAKEREASGITGLKIDYNKKDGYYFHVTN-SQLSHVPAHFFRK 479
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
L ++ T++ R ++L A ++ A N E TI R +E G Y Q
Sbjct: 480 ATLKNSERFGTEELARIEG-DMLEAREKSA--NLEYTIFMR-----IREEVGKYIQRLQQ 531
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPND 784
QA+A +D L +LA+++ ++ RP+F HE +I I GRHPV++ ++ +++PN
Sbjct: 532 LAQAIATVDVLQSLASVAESQQLNRPLF---HEERRIAIDKGRHPVVEKVMGAQSYIPNS 588
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
+ ER+ Q+ITGPNM GKS Y+RQ+A+I I+AQ+GS+VPA AEL + D IYTR+GA
Sbjct: 589 IFMDEERD-IQLITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQKAELPIFDAIYTRIGA 647
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D + G+STF+ E+ EA++ +R QSL++ DELGRGT+T+DG+A+A + ++Y+ +
Sbjct: 648 ADDLVSGQSTFMVEMMEANHAIRKAMPQSLILFDELGRGTATYDGMALAQSIIEYIHDRT 707
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
LF THY ++ + T + HV+ L + D VT+L+K+ PG +
Sbjct: 708 GAKTLFATHYHELTALSETLT-RLENVHVATL-----------ERDGQVTFLHKIEPGPA 755
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR-VQNRSAKRDLLVKLSDQ----EQ 1019
+ S+G VA++A LP + RA I KLE + + + + K+++ ++++Q E+
Sbjct: 756 DKSYGIHVAKIAGLPEELLKRADAILTKLEGQAQQVPLVDETPKKEVSSQVAEQMSLFEE 815
Query: 1020 EAQ 1022
EA+
Sbjct: 816 EAE 818
>gi|281422309|ref|ZP_06253308.1| DNA mismatch repair protein MutS [Prevotella copri DSM 18205]
gi|281403630|gb|EFB34310.1| DNA mismatch repair protein MutS [Prevotella copri DSM 18205]
Length = 887
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 302/575 (52%), Gaps = 66/575 (11%)
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+LL++++ T+T G R+LRRW+ PL D I+ RLD V +
Sbjct: 302 SLLNVIDRTVTAMGGRMLRRWLVFPLKDVKPINERLDIVEYFFK---------------- 345
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
EP+F +L L R D++R I+++ +P E + + A L A K +
Sbjct: 346 --------EPEFRQLLDD---QLHRISDLERIISKVAVGRVSPREVVQLKNA-LEAIKPI 393
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI-GKAAKLLSTVNKEAADQGDLLNL 605
KV + + LKR+ + + + A+ + + ++GD
Sbjct: 394 -----------KVACQHATNEALKRVGEQLNVCETLKDRIAREIQPDPPQLVNKGD---- 438
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK 665
+I++G +E+ R + K+ L + ++ G+ +L+ + + +E+ FK
Sbjct: 439 -VIADGFNAELDDLRAISRHGKDYLLKIQEREIEKTGISSLKVGYNNVFGYYLEVRNTFK 497
Query: 666 --VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
VP W + + + RY + E+ +++ A+E++ ++ ++ + Y +
Sbjct: 498 DKVPEEWIRKQTLAQAERYITQELKEYEEKILGADEKILVLEAQLFNELIAAMQEYIPQI 557
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFV 781
Q +A +DCL + A S +VRP+ VDD E + I GRHPV++T L + +V
Sbjct: 558 QINANLIARMDCLLSFAKTSDENRYVRPI-VDDSEVLDIK--QGRHPVIETQLPLGERYV 614
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND L E++ +ITGPNM GKS +RQ ALI ++AQVG FVPA SA + ++D I+TR
Sbjct: 615 PNDVLLDTEKQQIMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAESARVGLVDKIFTR 674
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD+I G STF+ E+ EA+ IL N + +SLV+ DELGRGTST+DG++IA+A ++YL
Sbjct: 675 VGASDNISLGESTFMVEMTEAANILNNVSPRSLVLFDELGRGTSTYDGISIAWAIVEYLH 734
Query: 902 EHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
EHKK LF THY ++ +++ F + ++VS + D V +L K+
Sbjct: 735 EHKKAQARTLFATHYHELNEMEKNFP-RIKNFNVSV-----------REVDGKVIFLRKL 782
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
PG SE SFG VA++A +P S ++RA VI +LE
Sbjct: 783 EPGGSEHSFGIHVAEIAGMPRSIVNRANVILKQLE 817
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 41/224 (18%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT--- 142
NK TP+ +Q E+K+K+P+ LL+ G + + EDA A+++LGI +N +
Sbjct: 5 NKGLTPMMRQFFEMKSKHPEALLLFRCGDFYETYCEDAVEASRILGITLTRRNNGGSTGT 64
Query: 143 ---ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA-HGPGKAG------PFGRGLSA 192
A P L+ ++ +L+ AG +V V Q E K GK G RG++
Sbjct: 65 TEMAGFPHHALDTYLPKLIRAGKRVAVCDQLEDPKKKRLEIKGKKGLSQMDKMVKRGITE 124
Query: 193 LYTKATLEAAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
L T V G++ E+N+L V + GK GV ++
Sbjct: 125 LVTPG-------VAMGDNVLNYKENNFLAAV-----HFGK-----------TACGVSFLD 161
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEK 295
ISTG+ + GE + +E ++ + P E+L + EK
Sbjct: 162 ISTGEFLTGEGTYDY----VEKLMGNFMPKEVLYDRARKNDFEK 201
>gi|375254470|ref|YP_005013637.1| DNA mismatch repair protein MutS [Tannerella forsythia ATCC 43037]
gi|363406473|gb|AEW20159.1| DNA mismatch repair protein MutS [Tannerella forsythia ATCC 43037]
Length = 870
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 251/928 (27%), Positives = 429/928 (46%), Gaps = 154/928 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL +Q ++K+K+PD +L+ VG + +GEDA A +LGI N A
Sbjct: 7 TPLMKQYFDIKSKHPDAILLFRVGDFYEMYGEDAVAGADILGIVQTKRANGAAQYVEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDTYLPKLVRAGRRVAICDQLEDPKLTKK------LVKRGVTELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
V E+N+L V FG GV ++ISTG+ + E
Sbjct: 120 VLDHR-----ENNFLAAVH-------------FGKSL---CGVAFLDISTGEFLTAEGTP 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ +L + +P E+L+ + L + + SR C
Sbjct: 159 ----ETIDKLLTNFAPKEVLVKRGLRSRFAETF--------------GSRYC-------- 192
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE----GIMNMPDLAVQALALTIRHLK 380
L+E S+ D+ + H + G+ ++ V A A+ I +L
Sbjct: 193 ----LFEQDDWVFTSSTADERL-----LKHFETVSLKGFGVADLSQGIVAAGAILI-YLD 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
Q ++ + ++ + + L T+ LE+++ + G +LL I++ T + G
Sbjct: 243 QTKHTQVAHI-STLSRIEEDRYVRLDKFTVHSLELVQTMNEGGI--SLLDILDRTTSPMG 299
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH-DEKNSDVTIVEPQFY 499
+RLLRRW+ PL D + I R D V E +H D+K+
Sbjct: 300 ARLLRRWLLFPLKDLDAIRRRQDTV-------------EYFFRHPDDKDE---------- 336
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE----- 554
L +L +G D++R I+++ +P E + + A L A ++++ ++G
Sbjct: 337 --LCRLLGEIG---DLERIISKVAVGRVSPREVVQLKTA-LQAIAPIREICLNGNEPSLQ 390
Query: 555 -YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ E++ S + + I PA++ K I+++G
Sbjct: 391 AFGEQLDPCAAISERIAKEICN-DPPALVNKGG--------------------IMAHGVS 429
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWA 671
SE+ R+ S K+ L + ++ G+ +L+ F +V G + KVP W
Sbjct: 430 SELDELRQLSYSGKDYLMRVQQRESERTGIPSLKIAFNNVFGYYIEVRNTHKDKVPPEWI 489
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY + E+ +++ A E++ + ++ + E Y Q +A
Sbjct: 490 RKQTLVNAERYITEELKEYEEKILGAEEKILSLEMQLFNELVAELTNYIRPIQQDAHVIA 549
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHA 789
LDCL + A +++ ++RPV VDD + + I GRHPV++ L + +V ND L
Sbjct: 550 QLDCLLSFAQTAQSNRYIRPV-VDDSDVIDIK--GGRHPVIEQQLPAGEPYVANDVYLDK 606
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+++ +ITGPNM GKS +RQ ALI +MAQ+GSFV A S + +D I+TR+GASD+I
Sbjct: 607 KQQQILMITGPNMAGKSALLRQTALITLMAQIGSFVSADSVRIGRVDKIFTRVGASDNIS 666
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM-- 907
G STF+ E+NEA+ IL N + +SLV+ DELGRGTST+DG++IA+A ++Y+ E +
Sbjct: 667 VGESTFMVEMNEAANILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEYIHEQPQAAAR 726
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ +++ F + ++VS +S + V +L K+ PG SE S
Sbjct: 727 TLFATHYHELNEMERSFK-RIRNFNVSV-----------KESGKKVIFLRKLTPGGSEHS 774
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEA 995
FG VA++A +P S + R+ I ++EA
Sbjct: 775 FGIHVAKMAGMPKSIVKRSNEILKQMEA 802
>gi|30249667|ref|NP_841737.1| DNA mismatch repair protein MutS [Nitrosomonas europaea ATCC 19718]
gi|44888191|sp|Q82U08.1|MUTS_NITEU RecName: Full=DNA mismatch repair protein MutS
gi|30180704|emb|CAD85616.1| mutS; DNA mismatch repair protein [Nitrosomonas europaea ATCC 19718]
Length = 873
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 274/957 (28%), Positives = 425/957 (44%), Gaps = 193/957 (20%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K ++ D LL +G + F EDAE AAK+L I + A
Sbjct: 9 HTPMMQQYLRIKAQHTDKLLFYRMGDFYELFYEDAEKAAKLLDITLTQRGSSAGEPIKMA 68
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ RLV G + + +QT A GP R + + T TL
Sbjct: 69 GVPFHAADQYLARLVRLGESIAICEQTGDPATSK------GPVERQVIRILTPGTLT--- 119
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
D G E+ SN +V + + G +G+ + ++ GD+ E +
Sbjct: 120 DAGLLEE----RSNSIVLAL-------ALHRG--------SIGLAWLNLAAGDMRVLETS 160
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA-------------SNVRVE 310
L S LE L PAE+LL P S L +AGP + +
Sbjct: 161 SDNLTSELE----RLHPAEILL--PESLDLPATLNNFAGPKRLPDWQFDYEHAMQQLTRQ 214
Query: 311 CASRD-----------CFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE 359
+RD + GAL E + L + D S
Sbjct: 215 FGTRDLNAFGCEDLHAAIMAAGALFEYVRLTQQTATDGSSGQ------------------ 256
Query: 360 GIMNMPDLAVQALALTIRHLKQFGLER---IMCLGASFRSLSGSMEMTLSANTLQQLEVL 416
+P HL +ER + + A+ R ++E+TL+ L
Sbjct: 257 ----LPG-----------HLHTLQVERQDAYLRMDAATRR---NLEITLT---------L 289
Query: 417 RNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYR 476
R G + TL +++ T GSRLLR W+ HPL +R + RLD VS++ +G+
Sbjct: 290 R----GEDAPTLSSLLDTCSTGMGSRLLRHWLHHPLRNRITLQQRLDTVSDL---IGAQP 342
Query: 477 TSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVM 536
+ G + QF +I DI+R +RI RTA P + +
Sbjct: 343 ETLYAG-----------IRQQFKHI-----------ADIERITSRIALRTARPRDLSGLR 380
Query: 537 QAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTAS-SPAVIGKAAKLLSTVNKE 595
++ + + G TS +A + R I P + + L V
Sbjct: 381 DSL---------MRLPGIIELIATSA---AAAVHRFIPPMQPDPLLTQLLVRALQPVPGA 428
Query: 596 AADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSG 653
+G +I++G +E+ R + E L L R++ G+ NL E+ V G
Sbjct: 429 VIREGG-----VIADGFDAELDELRGLQGNCDEFLLQLEARERERTGIPNLKVEYNRVHG 483
Query: 654 ITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEV-------LTALDQLALANEELTIVCR 706
+ K+P ++ + + K RY PE+ L+A +Q ALA E++
Sbjct: 484 FYIEVTRAQGEKIPPDYRRRQTLKNAERYIIPELQAFEHKTLSAREQ-ALAREKML---- 538
Query: 707 AAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICS 766
++ L++ + Q +++A LD L A A + + +PVF DD PV I I +
Sbjct: 539 --YERLLEQLADFIIPLQEIARSVAELDVLCAFAERAALSGYTKPVFTDD--PVLI-IEA 593
Query: 767 GRHPVLDTILLDNFVPNDTNLHA---EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
GRHPV++ +++++ ND L A E +ITGPNMGGKS Y+RQ AL ++A GS
Sbjct: 594 GRHPVVEN-QVEHYIANDVQLGAITRENRQMLVITGPNMGGKSTYMRQTALTVLLAHCGS 652
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
FVPA A + +D I+TR+GA+D + GRSTF+ E+ EA+ ILRN TAQSLV+VDE+GRG
Sbjct: 653 FVPAQIARIGPIDQIFTRIGAADDLAGGRSTFMVEMTEAAGILRNATAQSLVLVDEIGRG 712
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
TST DG+A+A+A +LL + LF THY ++ + +F +V HV+ + HK
Sbjct: 713 TSTFDGLALAFAIARHLLTQNQSYTLFATHYFELTRLAEEFPQAVNI-HVTAV-EHK--- 767
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ + +L+++ G + S+G VA LA +P I A I A+LE E SR
Sbjct: 768 -------RRIVFLHRIEEGPASRSYGLHVAALAGVPDRVIRNAAKILARLEQETLSR 817
>gi|353241684|emb|CCA73482.1| related to MSH6-DNA mismatch repair protein [Piriformospora indica
DSM 11827]
Length = 1265
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 251/948 (26%), Positives = 411/948 (43%), Gaps = 103/948 (10%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K++TP E Q E+K + D +L + G + + +DA + ++ + +P
Sbjct: 346 KEFTPFETQFWEIKRDHYDTILFFQKGKFYELYEDDARIGHQLFDLKLTSRVKMSMVGVP 405
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETA-------AIKAHGPGKAGPFGRGLSALYTKATL 199
+ + + G+KVG V+Q ET+ A A R L+ ++T TL
Sbjct: 406 ESSFDFWANKFLARGYKVGKVEQAETSIGAEMRAAAGAGKGKGKELVKRVLNKVFTTGTL 465
Query: 200 EAAEDVGGGEDGCGGESNYLVCV-VDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
GE E+++ V + V + + + + G ++ ST +
Sbjct: 466 M------DGEYLIDEEASHCVSIRVRLSAAQNEQSLTALKEQGESKFGFAILDSSTSEFK 519
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
F D R+ E +L L P E++ LS T + LL P S + F
Sbjct: 520 LCSFEDDVCRTRTETLLRQLRPKEVIGN--LSVSTNR-LLKNVLPGSCAITSLRPVEGFD 576
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM--PDLAVQALALTI 376
L E+ SLY + +D + G+ E I +M + + AL I
Sbjct: 577 YQTTLKELSSLYPSPEDD-------------DDGSGAGMPEAIRSMIGEEAPIIALGAMI 623
Query: 377 RHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
+L+ ++ + +F + + L TL +EVL N S+GS+ GTLL ++
Sbjct: 624 WYLRTLNIDAALLSAKNFNIYDPMRRGEGLVLDGQTLAHIEVLMN-SDGSDDGTLLKLLG 682
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
+T +G RL R W+ PL + I+ RLDAV E + +HD
Sbjct: 683 RCVTPFGKRLFRIWLCTPLREIKQINDRLDAV-------------EDLMRHD-------T 722
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
E +F ++ + PD++R ++RI T +F+ V+++ L L
Sbjct: 723 FEKEFTDLVRGM-------PDLERIVSRIHAGTCKVKDFLKVLESFKKLNNGLSGLAEKA 775
Query: 554 E-YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+ + + L SA + L A + + + ++ D+ +
Sbjct: 776 SCFDTQTVAGLLRSAHDLKPYLKAVRGMFVPPSNDNFELIPEDGVDE------------E 823
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM-SVSGITHL----IELPANFKVP 667
+ +A K + + +L+ + K+L ++ LEF S +G + + P VP
Sbjct: 824 YDTIA---KEIHDIETDLEQRLARLAKKLDIK-LEFWHSATGTKDIYLVQVNAPDKKSVP 879
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+W K N TK R+ P+ + +L A E + V + F + V
Sbjct: 880 KDWQKQNDTKAKARFMVPDFAGPIRKLKEARETMKTVVKGFTSRLYAAFDADRDVWLRTV 939
Query: 728 QALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL----LDNFV 781
+ A LDCL +LA S RP FV + + RHP + L +F+
Sbjct: 940 RVTAELDCLLSLAKASAAIGSPSCRPEFVQSDKAF-VDFEELRHPGIAMALGAKGGADFI 998
Query: 782 PNDTNLHAE-REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
ND + ++ ++ ++TGPNM GKS +RQ + IMAQ+G +VPA+ A+L +D I T
Sbjct: 999 ANDVKMGSDGKQRIMLLTGPNMAGKSTLMRQTCVGVIMAQLGMYVPATGAKLSPVDAILT 1058
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA D++ STF EL+E ILR T +SLVI+DELGRGTST DG+AIA A L +L
Sbjct: 1059 RMGAYDNMFSNSSTFKVELDECCKILREATPKSLVILDELGRGTSTFDGIAIAGAVLHHL 1118
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
H + F THY + + YH + H G D ++++ +LYK+V
Sbjct: 1119 ATHTLALSFFATHYSTLTNDY--------AYHQNISMMHMATGFDD--ENRELIWLYKLV 1168
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
GV+ SSFG VA LA +P + RA V++ + + R+ R+ R
Sbjct: 1169 EGVAPSSFGTHVASLAGVPKDVVERADVVSKDFARQFAERLAGRTVGR 1216
>gi|312866817|ref|ZP_07727030.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0405]
gi|311097600|gb|EFQ55831.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0405]
Length = 849
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 252/931 (27%), Positives = 427/931 (45%), Gaps = 168/931 (18%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K +P QQ +++K YPD L+ +G + F EDA AA++L I + ++
Sbjct: 4 EKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ L+ G+KV + +Q E P +A G R + + T T+
Sbjct: 64 MAGVPYHSAQQYIDVLIEQGYKVAIAEQME-------DPKEAKGVVKREVVQVITPGTVV 116
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ E+N+LV + D GN G+ +++ TG+
Sbjct: 117 DSTK-------PDSENNFLVAL-DRSGN---------------DYGLAYMDLVTGEFQVT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
ND + G + +L E++LG L +Q E++ ++ + VE A D + G
Sbjct: 154 TLNDFSMVCG---EIRNLRAREVVLGYELPEQEERVFVSQMNLLLS-HVETALDDVQLLG 209
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
L+E+ ++A + + + ++ L+ HLK
Sbjct: 210 DQLSEL--------------------------EKKTAGKLLQYVYQTQMRELS----HLK 239
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ A + ++M + T L++ N G ++G+L ++ T T G
Sbjct: 240 K----------AHHYEICDFLQMDFA--TKASLDLTENARTGKKHGSLYWYLDETKTAMG 287
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLLR W+ PL D I R D + + H + SD+T
Sbjct: 288 GRLLRSWIQKPLVDLKRIRERQDIIQVFMD-------------HFFERSDLT-------- 326
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---------MQAILYAGKQLQQLHI 551
SL DI+R +R+ P + + + +++IL L I
Sbjct: 327 ------DSLKGVYDIERLASRVSFGKINPKDLLQLGDTLGHVPTIKSIL--------LGI 372
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSP---AVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ + ++ L RLI +A +P AVI + ++ T E DQ ++ +
Sbjct: 373 GDPVLDVLIARLDELPELHRLITSAIAPEASAVITEG-NIIRTGFDEQLDQYRVV--LRD 429
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KV 666
G +E+ AKE S I + ++ + V+ + L +PA+F K
Sbjct: 430 GTGWIAEI--------EAKEREASGITGLKIDYNKKDGYYFHVTN-SQLSHVPAHFFRKA 480
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
L ++ T++ R ++L A ++ A N E TI R +E G Y Q
Sbjct: 481 TLKNSERFGTEELARIEG-DMLEAREKSA--NLEYTIFMR-----IREEVGKYIQRLQQL 532
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDT 785
QA+A +D L +LA+++ ++ RP F HE +I I GRHPV++ ++ +++PN
Sbjct: 533 AQAIATVDVLQSLASVAESQQLNRPFF---HEERRIAIDKGRHPVVEKVMGAQSYIPNSI 589
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
+ ER+ Q+ITGPNM GKS Y+RQ+A+I I+AQ+GS+VPA AEL + D IYTR+GA+
Sbjct: 590 FMDEERD-IQLITGPNMSGKSTYMRQLAIIVILAQIGSYVPAQKAELPIFDAIYTRIGAA 648
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D + G+STF+ E+ EA++ +R T QSL++ DELGRGT+T+DG+A+A + ++Y+ +
Sbjct: 649 DDLVSGQSTFMVEMMEANHAIRKATPQSLILFDELGRGTATYDGMALAQSIIEYIHDRTG 708
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++ + + + HV+ L + D VT+L+K+ PG ++
Sbjct: 709 AKTLFATHYHELTALSETLS-RLENVHVATL-----------ERDGQVTFLHKIEPGPAD 756
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
S+G VA++A LP + RA I KLE +
Sbjct: 757 KSYGIHVAKIAGLPEELLKRADAILTKLEGQ 787
>gi|387902624|ref|YP_006332963.1| DNA mismatch repair protein MutS [Burkholderia sp. KJ006]
gi|387577516|gb|AFJ86232.1| DNA mismatch repair protein MutS [Burkholderia sp. KJ006]
Length = 885
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 253/926 (27%), Positives = 411/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K +PD L+ +G + F EDAE AA++L + A + A
Sbjct: 12 HTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGNPIKMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G V + +Q A GP R + + T TL A
Sbjct: 72 GVPHHAVEQYLAKLVKMGESVAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D YL+ + G + GV V +G+ + +++G + E
Sbjct: 126 LLSDKND------VYLLAMY-----TGHNKRGVA-----VNIGLAWLNLASGALRLAEIE 169
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 170 PDQLGAALERI----RPAEILTADGATDAVP------AGAGAVKRVPAWHFDIASGTQRL 219
Query: 324 AEVMSL--YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ + + + G +L+ SA + A +RH++
Sbjct: 220 CDQLDVAGLDGFGAHSLT----------------SACGAAGALLLYAAATQGQQLRHVRS 263
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+E S + + L T + LE L G+E TL +++ T GS
Sbjct: 264 LKVE------------SETEYIGLDPATRRNLE-LTETLRGTESPTLYSLLDTCCTTMGS 310
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLR W+ HP S+ + +++G + +D
Sbjct: 311 RLLRHWLHHP----------------PRASVAAQSRQQAIGALLDAPADAN--------- 345
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L ++ ++L + D++R R+ +A P + ++ L L RE++++
Sbjct: 346 LDALRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERISA 395
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLL-STVNKEAA----DQGDLLNLMIISNGQFSEV 616
++ L R+ + PA + LL S + E A D G +I+ G +E+
Sbjct: 396 IVANADALARVDAALAPPA---ECLDLLTSAIAPEPAAMVRDGG------VIARGYDAEL 446
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 447 DELRDISENCGQFLIDLEARERARTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 506
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + E Q ALA LD
Sbjct: 507 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPFIPECQRVASALAELD 566
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F DD + I I GRHPV++ ++ F+ ND A+R+
Sbjct: 567 VLAAFAERARTLDWVAPTFTDD---IGIEIEQGRHPVVEA-QVEQFIANDCRFGADRKLL 622
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA SA +D I+TR+GA+D + GRST
Sbjct: 623 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRST 681
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL C LF THY
Sbjct: 682 FMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAQNGCYTLFATHY 741
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + ++F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 742 FELTQLPSEFPQAANVHLSAVEHGHGIV------------FLHAVNEGPANQSYGLQVAQ 789
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 790 LAGVPAPVIRAARKHLAYLEQQSAAQ 815
>gi|309809651|ref|ZP_07703507.1| DNA mismatch repair protein MutS [Lactobacillus iners SPIN 2503V10-D]
gi|308170011|gb|EFO72048.1| DNA mismatch repair protein MutS [Lactobacillus iners SPIN 2503V10-D]
Length = 854
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 243/957 (25%), Positives = 432/957 (45%), Gaps = 161/957 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + + G+ G+ ++STG
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSN------------SQGW----GLTYCDLSTG----- 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI-- 318
E+ L+ E+++ + LS QT +++ + + + F+
Sbjct: 149 -----------ESYATHLTSWEMIVNELLSLQTRELVYG--------KTLTSDKQIFLKK 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
G L++ + L + E + V +Q +++ I + + ++ H
Sbjct: 190 AGITLSQPVKLSKEHAEISY---------VTQQLHNQLEIAATKQLLAYLLATQKRSLAH 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L+ +S + + +S LE++++ G + G+L +++ T T
Sbjct: 241 LQ------------VTQSYEPNQYLQMSHIVQTNLELIKSAKTGKKMGSLFWLLDKTSTA 288
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL+ W+ PL + I +R V+ + +
Sbjct: 289 MGGRLLKSWIERPLISLSEIKSRQLVVTALFDD--------------------------- 321
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDG 553
Y+ ++ L D++R R+ +A E + + ++ + + L +
Sbjct: 322 YFSREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLN 381
Query: 554 EYREKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+ +K+ K +H ++K ++ +P LST KE II G
Sbjct: 382 NFAQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKAGV 419
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN- 669
S++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+
Sbjct: 420 SSQLDRYRDAMMNGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKDKVPLDR 479
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY + E+ + A + T + + + ++ Y Q +
Sbjct: 480 YMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQ 539
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
L++LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND +
Sbjct: 540 LSSLDVLSTFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD 597
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 598 -EQTNIFLITGPNMSGKSTYMRQLALIIIMAQMGCFIPADSAVLPIFDKIFTRIGAGDDL 656
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
G+STF+ E++EA+ L+N T +SL++ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 ISGKSTFMVEMSEANIALKNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKT 716
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ D+ + + HV ++ + + +L+K++PG ++ S+
Sbjct: 717 LFATHYHELTDLDQEL-AHLKNIHVGA-----------TQENGHLIFLHKILPGAADRSY 764
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
G VAQLA LP + AT + +LE ++V + DL K+SD+EQ+
Sbjct: 765 GIHVAQLAGLPTKVLREATHMLKQLEKNSDNQVAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|289432904|ref|YP_003462777.1| DNA mismatch repair protein MutS [Dehalococcoides sp. GT]
gi|288946624|gb|ADC74321.1| DNA mismatch repair protein MutS [Dehalococcoides sp. GT]
Length = 858
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 271/955 (28%), Positives = 443/955 (46%), Gaps = 165/955 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFM-------T 142
TPL +Q +++K YP+ ++ +G + F EDA +AA+ L I L M
Sbjct: 5 TPLRKQYLDIKKNYPEAIVFFRLGDFYETFEEDARIAARELEIV--LTSREMGKGLKVPL 62
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
A IP L+ ++ RL+N G+KV + +Q PG+ G R ++ L T T+
Sbjct: 63 AGIPYHALDNYLSRLINKGYKVAICEQVTK-------PGETKGLVQRQVTRLVTPGTVVE 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ ++ N+L+ + + + G F D G IS
Sbjct: 116 PNLLQTKQN------NFLLSLYLTEDSCGL----AFADISTSEFGCTQTNISE------- 158
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
LEA + LSPAE++L + Q+ + + +++ + D +
Sbjct: 159 ---------LEAEISRLSPAEIILPK---NQSLNLPI-------HLKATISKLDGYYFEA 199
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+A E L + E QN+ G NMP LA+ A + +L++
Sbjct: 200 DIAR---------ERLLRHFECQNLSA----------YGCENMP-LAISAAGALLNYLEE 239
Query: 382 FG------LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
LER+ S + + M+M ++TL LE+ R++ S G+LL I++ T
Sbjct: 240 TQKSSLKQLERL-----SVYTTADYMQM--DSHTLSNLEIFRSSGGNSLKGSLLGILDQT 292
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G RLLR+++ PL ++ I RL AV Y ES+ +
Sbjct: 293 KTAMGGRLLRKFLGQPLLKQSDIEKRLSAVD--------YFFEESLAR------------ 332
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
+S+ SLG+ D++R RI +T P E I++ ++
Sbjct: 333 -------TSLAKSLGQIADMERMANRIRQKTILPRELISLKNSL---------------- 369
Query: 556 REKVTSKTLHSALLK--RL--ILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIIS 609
E V++ L+ RL L P ++L +NK D L + +I
Sbjct: 370 -ETVSAIHRQFGLMPPPRLAYFLNGLKPL-----PEMLDIINKTITDDPPSTLGDGKVIR 423
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVP 667
G E+ + A+ L + R++ G+++L+ + IE+ AN VP
Sbjct: 424 AGFDPEMDKLCSLAGDARTFLSQMETRERERTGIKSLKLGYNRVFGYYIEISNANLGDVP 483
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+ + + R+ +P++ + + A E L + ++ L + GG+Y+ A
Sbjct: 484 PEFIRKQTLVNAERFITPKLKEYENLILNAKERLLEMETGLYEQVLNQLGGFYSALLANA 543
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTN 786
ALAALD L A A ++ ++VRPVF H ++ I GRHP+++ L +FV ND +
Sbjct: 544 AALAALDVLSAFAEVAVRNSYVRPVF---HPENRLDIRKGRHPMVEQGLGYGSFVANDIS 600
Query: 787 LHAEREYCQII--TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
L AE CQII TGPNM GKS Y++Q ALI +MAQ+GS+VPA +AEL + D I+TR+GA
Sbjct: 601 LSAED--CQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFTRIGA 658
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+ + G+STF+ E+ E + IL T++SL+I+DE+GRGTST+DG+AIA A ++Y+
Sbjct: 659 REDLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQP 718
Query: 905 K--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
LF THY ++ ++ SYL K S+ +V +L+K+VPG
Sbjct: 719 SLTAKTLFATHYHELVEL------------ASYLPRVKNYNIAVSEDRGEVVFLHKIVPG 766
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
+ S+G VA+LA LP I RA + +LE + ++R+ + L + ++ Q
Sbjct: 767 GVDKSYGIHVAKLAGLPKWVIKRAYEVLTELENPAKKQPKSRTCQPQLQLPMTGQ 821
>gi|317472765|ref|ZP_07932077.1| DNA mismatch repair protein MutS [Anaerostipes sp. 3_2_56FAA]
gi|316899757|gb|EFV21759.1| DNA mismatch repair protein MutS [Anaerostipes sp. 3_2_56FAA]
Length = 872
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 247/936 (26%), Positives = 433/936 (46%), Gaps = 145/936 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q + +K + D +L +G + F +DA A++ L G ++
Sbjct: 3 KLTPMMEQYMAIKEQNQDCILFYRLGDFYEMFFDDALTASRELEITLTGKNCGMEERAPM 62
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
+P ++ ++ +LV G+KV + +Q E P + G R + + T T +
Sbjct: 63 CGVPFHAVDSYLNKLVEKGYKVAICEQVE-------DPKQTKGIVKREVIRIVTPGTNIS 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ + ED ++NYL+C+ D D F G+ V+++TGD
Sbjct: 116 QQSL---EDE---KNNYLMCIFCSD------------DSF----GLSVVDVTTGDFRTTS 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
++ L ++ + +PAE++ A S V +E FI
Sbjct: 154 MDE--LHKVVDEIF-KFAPAEIICND-------------AFMISGVDIE------FIKDK 191
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI----MNMPDLAVQALALTIR 377
V ++ D +E+Q + H + G+ M +A AL L +
Sbjct: 192 LGVSVSNI------DHYYFDEEQGEAAIKSQFHVGNLNGLGLSDHPMGKIATGALLLYLH 245
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
++ L +M S S M + +++ + LE+ + + G+LL +++ T T
Sbjct: 246 ETQKNALNHLM----SVSPYETSEYMIIDSSSRRNLELCETLRDKKKKGSLLGVLDKTKT 301
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G+RLLR + PL DR I R DA++ + T +++ + + + + P
Sbjct: 302 AMGARLLRSMIEQPLIDRVKIEERYDALTSL--------TKQAIAREEIRE----YLNPV 349
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGE--- 554
+ D++R +T++ ++T P + IA+ ++ + L G+
Sbjct: 350 Y---------------DLERLMTKVSYQTINPRDMIALKVSLQWLPPIKTILEECGDSLL 394
Query: 555 --YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
RE + + + LL+ IL S AV KE II +G
Sbjct: 395 SGLREDLDTLEDVAGLLEDAILEEPSIAV------------KEGG---------IIKDGF 433
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNW 670
++ + ++A K+ L L R+ G++ L+ F V G + KVP ++
Sbjct: 434 SEQIDQLKRAKTDGKQWLMQLEERERRATGIKTLKVKFNKVFGYYLDVTNSYKDKVPEHY 493
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + + RY + E+ D + A + L + + S + G + +
Sbjct: 494 IRKQTLTNSERYTTEELNKLADTILGAEDRLCALEYETFASIRETLAGEMERIKKTAGVI 553
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHA 789
A LD L +LA ++ +VRP + I I GRHPV++ ++ D F+ NDT L +
Sbjct: 554 AYLDVLCSLACVAEQNGYVRPKL---NTKGLIDIKEGRHPVVEQMMSNDMFISNDTYLDS 610
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+R IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA A + ++D I+TR+GASD +
Sbjct: 611 KRHRVSIITGPNMAGKSTYMRQSALIVLMAQIGSFVPAQKANIGIVDRIFTRVGASDDLA 670
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCM 907
G+STF+ E++E + ILRN T SL+I+DE+GRGTST+DG++IA+A ++Y+ K
Sbjct: 671 SGQSTFMVEMSEVANILRNATKDSLLILDEIGRGTSTYDGLSIAWAVVEYISNPKLLGAK 730
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ +++ K GSV Y ++ + ++ +L K+V G ++ S
Sbjct: 731 TLFATHYHELTELEGKI-GSVNNYCIAV-----------KEQGDNIVFLRKIVKGGADKS 778
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQ 1002
+G +VA+LA +P I RA I ++L ++++ S+ Q
Sbjct: 779 YGIQVAKLAGVPDMVIQRAKEIVSELSDSDIVSQAQ 814
>gi|154504380|ref|ZP_02041118.1| hypothetical protein RUMGNA_01884 [Ruminococcus gnavus ATCC 29149]
gi|153795309|gb|EDN77729.1| DNA mismatch repair protein MutS [Ruminococcus gnavus ATCC 29149]
Length = 895
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 319/617 (51%), Gaps = 76/617 (12%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
M L ++T + LE+ + G+LL +++ T T G+R+LR++V PL ++ I RL
Sbjct: 279 MMLDSSTRRNLELCETLREKQKRGSLLWVLDKTKTAMGARMLRKYVEQPLIEKKEILRRL 338
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV E+ E I + LS V D++R +T+I
Sbjct: 339 DAVEELKEQ--------------------AICREEIREYLSPVY-------DLERLVTKI 371
Query: 523 FHRTATPSEFIA------VMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTA 576
+ +A P + A ++ I + L+ ++ E +E++ SAL+K I A
Sbjct: 372 TYGSANPRDLTAFGSSLTMLPPICCIMEDLRAPLLE-EIKEELDPLEDISALIKEAI--A 428
Query: 577 SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
P + K II +G EV R+A K+ L L +
Sbjct: 429 EEPPLAMKEGG-------------------IIRDGYSEEVDTLRRAKSEGKDWLAKLESE 469
Query: 637 CRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
R++ G++NL+ + +E+ +FK VP + + + RY PE+ D +
Sbjct: 470 EREKTGIKNLKIKYNKVFGYYLEVTNSFKDMVPDYYTRKQTLANAERYIIPELKELEDTI 529
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
A ++L + + + Q +A+A +D +LA ++ N+VRP
Sbjct: 530 LGAEDKLYALEYEIYCDVRNQIAAQVERIQTTAKAIAKVDVFASLALVAERSNYVRPKI- 588
Query: 755 DDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
+E I I GRHPV++ ++ D F+ NDT L +++ IITGPNM GKS Y+RQ A
Sbjct: 589 --NEQGVIDIKDGRHPVVEKMIPNDMFISNDTYLDDKKQRISIITGPNMAGKSTYMRQAA 646
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
LI +MAQ+GSFVPASSA + ++D I+TR+GASD + G+STF+ E+ E + ILRN T++S
Sbjct: 647 LIVLMAQLGSFVPASSANIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKS 706
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTY 931
L+I+DE+GRGTST DG++IA+A ++Y+ ++K LF THY ++ +++ K +V Y
Sbjct: 707 LLILDEIGRGTSTFDGLSIAWAVVEYISDNKLLGAKTLFATHYHELTELEGKI-HNVNNY 765
Query: 932 HVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAA 991
++ + K D D+ +L K+V G ++ S+G +VA+LA +P I+RA I
Sbjct: 766 CIA----------VKEKGD-DIVFLRKIVKGGADKSYGIQVAKLAGVPDVVITRAKEIVE 814
Query: 992 KLEAE-VSSRVQNRSAK 1007
+L E +++RV +++
Sbjct: 815 ELSDEDITTRVSEIASR 831
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ QQ +E K +Y D +L +G + F EDA A++ L G +
Sbjct: 17 TPMMQQYIETKKQYQDCILFYRLGDFYEMFFEDALTASRELEITLTGKNCGQEEKAPMCG 76
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTE 171
+P + ++ +LV+ G+KV + +Q E
Sbjct: 77 VPYHAVEGYLNKLVSKGYKVAICEQVE 103
>gi|134296270|ref|YP_001120005.1| DNA mismatch repair protein MutS [Burkholderia vietnamiensis G4]
gi|189030766|sp|A4JFW7.1|MUTS_BURVG RecName: Full=DNA mismatch repair protein MutS
gi|134139427|gb|ABO55170.1| DNA mismatch repair protein MutS [Burkholderia vietnamiensis G4]
Length = 886
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 253/928 (27%), Positives = 412/928 (44%), Gaps = 136/928 (14%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+ +TP+ QQ + +K +PD L+ +G + F EDAE AA++L + A +
Sbjct: 11 ETHTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGNPIK 70
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A +P + ++ +LV G V + +Q A GP R + + T TL
Sbjct: 71 MAGVPHHAVEQYLAKLVKMGESVAICEQIGDPATSK------GPVERKVVRVVTPGTLTD 124
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
A + D YL+ + G + GV V +G+ + +++G + E
Sbjct: 125 AALLSDKND------VYLLAMY-----TGHNKRGVA-----VNIGLAWLNLASGALRLAE 168
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L + LE + PAE+L + AG + RV D G
Sbjct: 169 IEPDQLGAALERI----RPAEILTADGATDAVP------AGAGAVKRVPAWHFDIASGTQ 218
Query: 322 ALAEVMSL--YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L + + + + G +L+ SA + A +RH+
Sbjct: 219 RLCDQLDVAGLDGFGAHSLT----------------SACGAAGALLLYAAATQGQQLRHV 262
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E S + + L T + LE L G+E TL +++ T
Sbjct: 263 RSLKVE------------SETEYIGLDPATRRNLE-LTETLRGTESPTLYSLLDTCCTTM 309
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP S+ + +++G + +D
Sbjct: 310 GSRLLRHWLHHP----------------PRASVAAQSRQQAIGALLDAPADAN------- 346
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L ++ ++L + D++R R+ +A P + ++ L L RE++
Sbjct: 347 --LDALRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERI 394
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLL-STVNKEAA----DQGDLLNLMIISNGQFS 614
++ ++ L R+ + PA + LL S + E A D G +I+ G +
Sbjct: 395 SAIVANADALARVDAALAPPA---ECLDLLTSAIAPEPAAMVRDGG------VIARGYDA 445
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAK 672
E+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 446 ELDELRDISENCGQFLIDLEARERARTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRR 505
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ K RY +PE+ T D+ A E RA +D L+ + E Q ALA
Sbjct: 506 RQTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPFIPECQRVASALAE 565
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAERE 792
LD L A A +R ++V P F DD + I I GRHPV++ ++ F+ ND A+R+
Sbjct: 566 LDVLAAFAERARTLDWVAPTFTDD---IGIEIEQGRHPVVEA-QVEQFIANDCRFGADRK 621
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA SA +D I+TR+GA+D + GR
Sbjct: 622 LL-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGR 680
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL C LF T
Sbjct: 681 STFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAQNGCYTLFAT 740
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ + ++F + + + H ++ +L+ V G + S+G +V
Sbjct: 741 HYFELTQLPSEFPQAANVHLSAVEHGHGIV------------FLHAVNEGPANQSYGLQV 788
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSR 1000
AQLA +P I A A LE + +++
Sbjct: 789 AQLAGVPAPVIRAARKHLAYLEQQSAAQ 816
>gi|385872890|gb|AFI91410.1| DNA mismatch repair protein mutS [Pectobacterium sp. SCC3193]
Length = 854
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 260/939 (27%), Positives = 409/939 (43%), Gaps = 184/939 (19%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ LK ++P++LL +G + F +DA+ A+++L I A A
Sbjct: 12 HTPMMQQYFRLKAEHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ RLV G V + +Q A GP R + + T T+
Sbjct: 72 GVPHHAVENYLARLVQMGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L + D G GF G ++IS+G E
Sbjct: 126 LLQEKQD------NLLAAIWQD------------GRGF----GYATLDISSGRFRVSEPA 163
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D R + A L +PAELL +
Sbjct: 164 D---RETMAAELQRTNPAELLYPESF---------------------------------- 186
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI--RHLKQ 381
E M L EN G R + PD A Q L L R L
Sbjct: 187 -ESMDLIEN-----------------RHGLRRRPLWEFE--PDTARQQLNLQFGTRDLTG 226
Query: 382 FGLERIM-------CL--------GASFRSLSG-SME-----MTLSANTLQQLEVLRNNS 420
FG+E+ CL S + G +ME + + A T + LE+ +N S
Sbjct: 227 FGVEQAKLALRAAGCLLQYAKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQNLS 286
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
G E TL +++ T+T GSR+L+RW+ P D + + R A+S + E
Sbjct: 287 GGVE-NTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQAISALQE---------- 335
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
+ P L L +G D++R + R+ RTA P + + A
Sbjct: 336 -------------ITPD----LQPYLRQVG---DLERILARLALRTARPRDLARMRHA-- 373
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG 600
QQ RE+++ L + ++RL+ + IG+ +L + + +
Sbjct: 374 -----FQQF---PAIREQLSP--LEADSVRRLV------SQIGQFDELRDLLERAVVEAP 417
Query: 601 DLL--NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITH 656
+L + +I+ G +E+ R A + LD L R++LG+ L+ F V G
Sbjct: 418 PVLVRDGGVIAPGYHAELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNGVHGYYI 477
Query: 657 LIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF 716
+ + VP+++ + + K RY PE+ D++ + + + +A +D
Sbjct: 478 QVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYDELFDLL 537
Query: 717 GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL 776
+ AE Q + ALA LD L LA + N++ P+ D +P I I GRHPV++ +L
Sbjct: 538 LPHLAELQQSATALAELDVLANLAERADTLNYICPMLSD--KP-GIKITGGRHPVVEQVL 594
Query: 777 LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
+ F+ N +L +R IITGPNMGGKS Y+RQ ALI +MA +G FVPA A + +D
Sbjct: 595 REPFISNPLSLSPQRRML-IITGPNMGGKSTYMRQAALIVLMAHIGCFVPADLAVIGPVD 653
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
I+TR+GA+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A
Sbjct: 654 RIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWAC 713
Query: 897 LDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTY 955
+ L K M LF THY ++ + K G V + +D++ D + +
Sbjct: 714 AENLANRIKAMTLFATHYFELTTLPEKMEGVVNVH-------------LDAREHGDTIAF 760
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V G + S+G VA LA +P I RA +LE
Sbjct: 761 MHSVQDGAASKSYGLAVAALAGVPKDVIKRARQKLKELE 799
>gi|317121911|ref|YP_004101914.1| DNA mismatch repair protein MutS [Thermaerobacter marianensis DSM
12885]
gi|315591891|gb|ADU51187.1| DNA mismatch repair protein MutS [Thermaerobacter marianensis DSM
12885]
Length = 1087
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 182/604 (30%), Positives = 299/604 (49%), Gaps = 63/604 (10%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
+ + AN+ + LE++R +GS GTLL +++ T T G RLLR+W+ PL DR+ + RL
Sbjct: 378 LAIDANSRRNLELVRRLRDGSRQGTLLDVLDLTETAMGRRLLRQWIERPLVDRDAVEDRL 437
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV + + +P L +L + D+ R + R+
Sbjct: 438 DAVEAL------------------------VADPFLRSDLRRLLAGV---QDLPRLLGRV 470
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQL--HIDGEYREKVTSKTLHSALLKRLILTASSPA 580
++ A + + + +++ ++L +L +DG + + L A
Sbjct: 471 GYQQANARDLLGIARSL----ERLPELAARLDGALNGRRGGR-----------LEAVRAG 515
Query: 581 VIGKAAKLLSTVNKEAADQG--DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCR 638
+ A+L + + D + +I +G EV R+A + ++ + +L R
Sbjct: 516 LDPDLAELGTRLRAALVDDPPVTVTEGGLIRDGFHPEVDELRRATREGRDWIAALEARER 575
Query: 639 KQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLAL 696
++ G+++L+ F V G + VP ++ + + R+ +PE+ ++
Sbjct: 576 ERTGIKSLKVGFNKVFGYYIEVTRANRHLVPADYERRQTLAGAERFVTPELKDVESRILG 635
Query: 697 ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDD 756
A E L + + +E Q A ALA LD L ALA + +VRP D
Sbjct: 636 AEERLAALEHRLFIELRQEVAAAIPRLQVAADALAELDVLAALAEAAARYGYVRPKITTD 695
Query: 757 HEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIG 816
++ I +GRHPVLD L FVPND +L + E +ITGPNM GKS ++RQVALI
Sbjct: 696 R---RLRIKAGRHPVLDRTLGGRFVPNDVDLDGQDERVMLITGPNMAGKSTFMRQVALIV 752
Query: 817 IMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVI 876
IMAQ+GSFVPA+ AE+ ++D I+ R+GASD + G+STF+ E+ E + + N T +SL++
Sbjct: 753 IMAQMGSFVPAAEAEIGLVDRIFCRVGASDDLASGQSTFMVEVAETALAVHNATPRSLIL 812
Query: 877 VDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYL 936
+DE+GRGTST DG+AIA A ++Y+ + L THY ++ + G + YH +
Sbjct: 813 LDEIGRGTSTFDGIAIARAVIEYVHDRIGARTLVSTHYHELTGLAATRPG-IRNYHARVV 871
Query: 937 TSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
V +L+++VPG ++ S+G VA+LA LP + RA I A+L+
Sbjct: 872 EEGDT-----------VRFLWRIVPGGADRSYGINVARLAGLPVEIVERAKAILAELDRR 920
Query: 997 VSSR 1000
R
Sbjct: 921 SGPR 924
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
+ TP+ +Q E K +YPD +L +G + FG+DA +AA++L I
Sbjct: 36 RETPMMRQYREWKERYPDCILFFRLGDFYEMFGDDARLAARILDITLTSRETAKGERVPM 95
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTE 171
+P ++ ++ RLV AG++V + +Q E
Sbjct: 96 CGVPYHAVDQYLPRLVEAGYRVAICEQVE 124
>gi|392398187|ref|YP_006434788.1| DNA mismatch repair protein MutS [Flexibacter litoralis DSM 6794]
gi|390529265|gb|AFM04995.1| DNA mismatch repair protein MutS [Flexibacter litoralis DSM 6794]
Length = 890
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 260/966 (26%), Positives = 427/966 (44%), Gaps = 204/966 (21%)
Query: 91 PLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTASI 145
PL +Q ++K K+PD +L+ VG + FGEDA AAK+L I N A
Sbjct: 21 PLMKQYNQIKAKHPDAILLFRVGDFYETFGEDAVRAAKILDITLTQRANGAASKIALAGF 80
Query: 146 PTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E P A G RG++ L T
Sbjct: 81 PHHSLDNYLPKLVRAGLRVAICDQLE-------DPKAAKGIVKRGVTELVTPGL------ 127
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
V G ++NYL V + + +G +++STG+ + E
Sbjct: 128 VLGDNVLENKKNNYLASVY------------FYKNKKYEAVGAAFLDLSTGEFLAAEGEY 175
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ E +L +P+E++ +
Sbjct: 176 SYI----EQLLERFAPSEIIYSK------------------------------------- 194
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRS--AIEGIMNMPDLAVQALA--LTIRHLK 380
SN ++ V QG++ S AIE + + A + L LK
Sbjct: 195 --------------SNKKEFETQVVRQGSNFSQFAIEEWIYTTNFAYEKLTKHFGTASLK 240
Query: 381 QFGLERI----MCLGA-----------------SFRSLSGSMEMTLSANTLQQLEVLR-N 418
FG+E + + GA S + + L + T + LE+L
Sbjct: 241 GFGIESLHAATIAAGAVLYYLETTEHHEKNHIISLSRVEQDKYVWLDSFTTRNLELLVPM 300
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
++NG +L+ I++ T+T G+RLLR+WV PL D I RL R
Sbjct: 301 HANGC---SLIEILDKTVTPMGARLLRKWVAFPLKDAKPIQNRL-------------RNV 344
Query: 479 ESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV--- 535
++ + D + L S L +G D++R I+++ P E + +
Sbjct: 345 ATLVKKDALQGE-----------LRSYLKEVG---DLERLISKVAVARINPKELVKLRDS 390
Query: 536 ------MQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLI--LTASSPAVIGKAAK 587
++ IL+ K + +L GE L++ +L++L L + P + +
Sbjct: 391 LEAIPPIKDILFKSK-MNELEAIGE------KIVLNNEILQKLQNELEDNPPLNVQQGTT 443
Query: 588 LLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
+ VNKE + D+ + S F E R R+ + + L +
Sbjct: 444 IKRGVNKELDELRDISS----SAKDFLEKVRQREIIATGITSL--------------KIS 485
Query: 648 FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRA 707
F V G + KVP W + + RY +PE+ +++ A ++++ + A
Sbjct: 486 FNRVFGYYIEVSNAHKTKVPAEWIRKQTLVNAERYITPELKEWEEKIVTAEDKISSIEYA 545
Query: 708 AWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSG 767
+ + + E Y Q + L+ LD L LA ++ N+ P D++ + I G
Sbjct: 546 LYHNLVSEVAKYVRVIQQNAKYLSMLDALCGLAEVAMQNNYSEPEITDNN---ILEIREG 602
Query: 768 RHPVLDTILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
+HPV++ +L + +VPND ++ E E IITGPNM GKS +RQ ALI +MAQ+GSFV
Sbjct: 603 KHPVIEKLLPIGEQYVPNDVIMNPESEQIFIITGPNMAGKSALLRQTALIVLMAQIGSFV 662
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
A SA++ V+D ++TR+GASD+I +G STF+ E++E + IL N + +SLV++DE+GRGTS
Sbjct: 663 SAKSAKIGVVDKVFTRVGASDNIAKGESTFMVEMSETASILNNLSDRSLVLMDEIGRGTS 722
Query: 886 THDGVAIAYATLDYL--LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
T+DG++IA+A ++YL L + K LF THY ++ ++K F + Y+VS +V G
Sbjct: 723 TYDGISIAWAIVEYLHSLPNAKPKTLFATHYHELNELKNDF-DRIKNYNVSV---KEVGG 778
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+ +L K+ G SE SFG VA LA +P + RA+ + E N
Sbjct: 779 --------KIIFLRKLKEGGSEHSFGINVASLAGMPKEVVLRASEMMHHFET-------N 823
Query: 1004 RSAKRD 1009
+ A++D
Sbjct: 824 KFAEKD 829
>gi|189030767|sp|A5FJ63.2|MUTS_FLAJ1 RecName: Full=DNA mismatch repair protein MutS
Length = 868
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 264/957 (27%), Positives = 423/957 (44%), Gaps = 193/957 (20%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K TPL +Q E+K KYPD L+ VG + FGEDA A+K+LGI A D
Sbjct: 9 KETPLMKQYNEIKRKYPDACLLFRVGDFYETFGEDAIRASKILGITLTKRGAGSDTETAL 68
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A P +N ++ +LV AG +V + Q E + RG++ L T
Sbjct: 69 AGFPHHSINTYLPKLVKAGLRVAICDQLEDPKMTK------TIVKRGVTELVTPGVSLND 122
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
E + + N+L V + N+G + +++STG+ + +
Sbjct: 123 EVLQSKTN------NFLASVCFANKNIG----------------ISFLDVSTGEFLTAQG 160
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS--RDCFIGG 320
N ++ + +L + +P+E+L+ + C S +D F
Sbjct: 161 NAEYI----DKLLQNFNPSEVLVPK----------------------NCKSEFKDAF--- 191
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRH 378
GED H +E + D A++ L
Sbjct: 192 -------------GEDF----------------HSFYLEDWIYKEDYALETLTKHFQTNS 222
Query: 379 LKQFGLER----IMCLGASFRSLSGSME-----------------MTLSANTLQQLEVLR 417
LK FG+E I+ GA LS + + + T++ LE+
Sbjct: 223 LKGFGVEELKEGIISAGAILYYLSETQHNRVQHITAIQRIAEDAYVWMDRFTIRNLELYH 282
Query: 418 N-NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYR 476
+ N N TLL +++ TL+ G RLL+RW+ PL D N I R VS + +
Sbjct: 283 SYNPNAV---TLLDVIDKTLSPMGGRLLKRWLALPLKDTNKIKGRHAVVSYLKSN----- 334
Query: 477 TSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVM 536
P+ IL ++ + + D++R I++I +P E + +
Sbjct: 335 -------------------PE---ILHNIQYQIKQISDLERLISKIAAGKVSPREIVYLK 372
Query: 537 QAILYAGKQLQQLHIDGEYRE-KVTSKTLHSA-LLKRLI---LTASSPAVIGKAAKLLST 591
++ L A ++ L ++ KV +LHS LL+ I L +P I K + +
Sbjct: 373 ES-LDAIIPIKTLALESPQEAVKVIGDSLHSCDLLREKIKTTLNQDAPVAISKGNAIATG 431
Query: 592 VNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELD-SLINMCRKQLGMRNLEFMS 650
VN+E D L + S +F E R++ ++ L S N+ + +RN
Sbjct: 432 VNEEL----DELRAISTSGKEFLEGIERRESERTGISSLKISFNNVFGYYIEVRN----- 482
Query: 651 VSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
TH KVP W + + RY + E+ ++ A E++ + ++
Sbjct: 483 ----TH------KDKVPEEWIRKQTLVNAERYITEELKEYETKILGAEEKIHKIESELFE 532
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+ Y Q +A LDCL + ++ +V P D E + I +GRHP
Sbjct: 533 QLVNWIATYIKPVQMNAYLVAQLDCLCSFTQMAVENQYVCPEIDDTFE---LDIKNGRHP 589
Query: 771 VLDTILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
V++ L ++ ND L E++ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA
Sbjct: 590 VIEKQLPVGTPYIANDVFLDREKQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAD 649
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
S + ++D I+TR+GASD+I G STF+ E+NE + IL N + +SLV++DE+GRGTST+D
Sbjct: 650 SVRMGIVDKIFTRVGASDNISMGESTFMVEMNETASILNNISDRSLVLLDEIGRGTSTYD 709
Query: 889 GVAIAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
G++IA+A ++L EH K LF THY ++ ++ T+ + Y+V+
Sbjct: 710 GISIAWAIAEFLHEHPSKAKTLFATHYHELNEM-TESLPRIQNYNVAV------------ 756
Query: 948 KSDQD-VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
K +D V ++ K+V G S SFG VA++A +P IS+A + KLE SS N
Sbjct: 757 KELKDTVLFVRKLVKGGSAHSFGIHVAKMAGMPQLVISKAQKLLKKLEKNHSSDALN 813
>gi|39933589|ref|NP_945865.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris
CGA009]
gi|48428291|sp|P61670.1|MUTS_RHOPA RecName: Full=DNA mismatch repair protein MutS
gi|39647435|emb|CAE25956.1| DNA mismatch repair protein mutS [Rhodopseudomonas palustris
CGA009]
Length = 907
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 250/935 (26%), Positives = 423/935 (45%), Gaps = 143/935 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K +P+ +Q E+K P +LL +G + F EDAE+A++ LGI HL +
Sbjct: 22 KMSPMMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIASRALGITLTKRGKHLGADIPM 81
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+P R + ++ RL+ G +V V +QTE A + R + L T TL
Sbjct: 82 CGVPVERSDDYLHRLIALGHRVAVCEQTED---PAAARARKSVVRRDVVRLITPGTLT-- 136
Query: 203 EDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
ED +NYL+ + G+ G R +G+ ++ISTG+
Sbjct: 137 ------EDTLLDARANNYLLAIARARGSAGADR-----------IGLAWIDISTGEFCVT 179
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVR----VECASRDC 316
E + + L A L ++P E ++ L TE A +R V +RD
Sbjct: 180 ECST----AELAATLARINPNEAIVPDALYSDTEL--------APTLRELAAVTPLTRDV 227
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
F A + + + ++G+ + L A A +
Sbjct: 228 FDSATAERRLCDYFAV-----------------------ATMDGLAALSRLEATAAAACV 264
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
++ + L + L R +GS M + T LE+ R + G G+LL ++ T+
Sbjct: 265 TYVDRTQLGKRPPLSPPAREATGST-MAIDPATRANLELTRTLA-GERRGSLLDAIDCTV 322
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T GSRLL + + PL D I+ RLDAV A G
Sbjct: 323 TAAGSRLLAQRLAAPLTDAATIARRLDAVEAFAVDSG----------------------- 359
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
+ + +SL +PD+ R + R+ P + + I A + L QL
Sbjct: 360 ----LREQIRSSLRAAPDMARALARLSLGRGGPRDLANLRDGIRAADEVLVQLAQLASPP 415
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFS 614
+++ S A L+R + +L + + + AD LL + + G
Sbjct: 416 QEIASAM---AALQR------------PSRELCAELGRALADDLPLLKRDGGFVREGYEP 460
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVN 674
+ RK +++ + S+ G++ L+ + + + +E+ A L +N
Sbjct: 461 ALDETRKLRDASRLVVASMQARYADDTGIKALKIRHNNVLGYFVEVSAQHGEKLMAPPLN 520
Query: 675 ST---KKT----IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+T ++T +R+ + E+ ++A A + + +D + +AA
Sbjct: 521 ATFIHRQTLAGQVRFTTAELGEIEAKIANAGDRALGLELEIFDRLAGSIDAAGDDLRAAA 580
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL---DNFVPND 784
A A LD ALA L+ + N+VRP + E + I GRHPV++ L + F+ N
Sbjct: 581 HAFALLDVATALAKLASDDNYVRP---EVDESLAFAIEGGRHPVVEQALKRAGEPFIANA 637
Query: 785 TNLH---AERE-YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
+L A++ ++TGPNM GKS ++RQ ALI ++AQVGSFVPA A + ++D +++
Sbjct: 638 CDLSPGPAQKNGQIWLLTGPNMAGKSTFLRQNALIALLAQVGSFVPAIRARIGIVDRLFS 697
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+GA+D + +GRSTF+ E+ E + IL + ++LVI+DE+GRGT+T DG++IA+A +++L
Sbjct: 698 RVGAADDLARGRSTFMVEMVETAAILNQASERALVILDEIGRGTATFDGLSIAWAAIEHL 757
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E +C LF THY ++ T + + + + + G +V +L++V+
Sbjct: 758 HEQNRCRSLFATHYHEL----TALSAKLPRLFNATVRVKEWRG--------EVVFLHEVL 805
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
PG ++ S+G +VA+LA LPPS +SRA + AKLEA
Sbjct: 806 PGSADRSYGIQVAKLAGLPPSVVSRAKAVLAKLEA 840
>gi|154493322|ref|ZP_02032642.1| hypothetical protein PARMER_02659 [Parabacteroides merdae ATCC
43184]
gi|154086532|gb|EDN85577.1| DNA mismatch repair protein MutS [Parabacteroides merdae ATCC
43184]
Length = 870
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 253/920 (27%), Positives = 433/920 (47%), Gaps = 144/920 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTASIPTF 148
+Q ++K K+PD +L+ VG + +GEDA A++LGI N A P
Sbjct: 2 KQYFDIKAKHPDAILLFRVGDFYEMYGEDAVTGAEILGIVQTKKANGPGQTIEMAGFPHH 61
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
L+ ++ +LV AG +V + Q E + RG++ L T + +++
Sbjct: 62 ALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDNILNH 114
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+ E+N+L + + GK DV G+ ++ISTG+ + E ++
Sbjct: 115 K-----ENNFLAAI-----HFGK----------DV-CGIAFLDISTGEFLTAEGTVDYV- 152
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMS 328
+ +L + SP E+L+ + K+ E+ GP FI L + +
Sbjct: 153 ---DKLLNNFSPKEVLVERGSRKRFEEAF----GPR-----------FFIF--ELDDWVF 192
Query: 329 LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIM 388
E + L + E +N+ +G G+ ++ L V A + +L Q I
Sbjct: 193 TSEAANDRLLKHFETKNL----KGF------GVQHLK-LGVVASGAILYYLDQTQHTHIS 241
Query: 389 CLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT-LLHIMNHTLTIYGSRLLRRW 447
+ S + + L T++ LE++ S +E GT LL +++ T++ GSR+LRRW
Sbjct: 242 HI-TSLSRIEEDRYVRLDKFTVRSLELV---STMNEEGTSLLDVLDKTVSPMGSRMLRRW 297
Query: 448 VTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLT 507
+ PL D I R D V E +H P+ +L L
Sbjct: 298 ILFPLKDVKPIHERQDVV-------------EYFFRH-----------PEVKELLEEKLE 333
Query: 508 SLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI--DGEYREKVTSKTLH 565
+G D++R I+++ +P E + ++ L A + +++ D ++ +
Sbjct: 334 QIG---DLERIISKVAVGRVSPREVVQ-LKVALRAIEPIKEACTASDEPSLCRIGEQLNA 389
Query: 566 SALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKA 622
AL++ I + P+++ + + + VN E D L + S + +AR
Sbjct: 390 CALIRDRIEKEINNDPPSLLNRGGVIATGVNAEL----DELRAIAYSGKDYLLKVQAR-- 443
Query: 623 VQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKTI 680
E+D L + ++G N+ + IE+ + KVP W + +
Sbjct: 444 ------EID-LTGISSLKIGFNNV-------FGYYIEVRNAYKDKVPAEWIRKQTLVNAE 489
Query: 681 RYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALA 740
RY + E+ +++ A E++ + ++ + Y Q + LDCL + A
Sbjct: 490 RYITEELKEYEEKILGAEEKILSLEARLFNELVLCLSEYIPPIQMNANLIGRLDCLLSFA 549
Query: 741 TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQIIT 798
++ + ++RP D ++ I I +GRHPV++ L + ++ ND L E++ IIT
Sbjct: 550 KVAESNRYIRP---DVNDSQVIDIKAGRHPVIEKQLPIGEPYIANDVYLDDEKQQIIIIT 606
Query: 799 GPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEE 858
GPNM GKS +RQ ALI +MAQ+G FVPA A + ++D I+TR+GASD+I G STF+ E
Sbjct: 607 GPNMAGKSALLRQTALITLMAQIGCFVPAECARIGIVDKIFTRVGASDNISVGESTFMVE 666
Query: 859 LNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFVTHYPK 916
+NEAS IL N +++SLV+ DELGRGTST+DG++IA+A ++Y+ EH + LF THY +
Sbjct: 667 MNEASDILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNARAKTLFATHYHE 726
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLA 976
+ +++ F + Y+VS + + V +L K+VPG SE SFG VA++A
Sbjct: 727 LNEMEASFK-RIKNYNVSV-----------KEVNNKVIFLRKLVPGGSEHSFGIHVAKMA 774
Query: 977 QLPPSCISRATVIAAKLEAE 996
+P S + R+ I +LE E
Sbjct: 775 GMPKSIVKRSNEILKQLETE 794
>gi|409198043|ref|ZP_11226706.1| DNA mismatch repair protein MutS [Marinilabilia salmonicolor JCM
21150]
Length = 873
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 192/595 (32%), Positives = 303/595 (50%), Gaps = 72/595 (12%)
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
T++ LE+ + + G +L I++H++T GSRLL+RW+ PL D I R
Sbjct: 274 TIRNLEIFSSVNEGGR--SLTDIIDHSVTPMGSRLLKRWIALPLKDVQPIKDR------- 324
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT 528
+SV +H K +PQ L S L +G D++R ++++ T
Sbjct: 325 ----------QSVVEHFFK-------DPQLKMDLESQLRPVG---DLERLVSKVASGRIT 364
Query: 529 PSEFIAVMQAILYAGKQLQQL--HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAA 586
P E I M+ L + + +++L H D + + + +K I P
Sbjct: 365 PREMIQ-MRNALNSIEPVRELCLHADNDVLNHIGGQLNPCVTIKERIEKEIMP------- 416
Query: 587 KLLSTVNKEAADQGDLLNL-MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN 645
D + LN +I G E+ R S K+ L+ L+ ++ G+ +
Sbjct: 417 -----------DPPNQLNKGNVIREGVSKELDELRHIAFSGKDYLNELLKRETERTGITS 465
Query: 646 LE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
L+ F +V G + KVP +W + + RY + E+ ++ A E + +
Sbjct: 466 LKISFNNVFGYYIEVRNTHKDKVPDDWIRKQTLVNAERYITEELKEYEAKILGAEERMLV 525
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIH 763
+ +++ + Q LA +DCL A+L+ N+VRPV ++ +
Sbjct: 526 LETELFNALTVALADFIPAIQLNSNLLARIDCLVGFASLAAQNNYVRPVITEED---SLD 582
Query: 764 ICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQV 821
I +GRHPV++ L + +VPND L +++ IITGPNM GKS +RQ ALI +MAQ+
Sbjct: 583 IKAGRHPVIEKQLPAGEEYVPNDVYLDNDKQQIIIITGPNMAGKSALLRQTALIVLMAQI 642
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
GSFVPA SA + V+D I+TR+GASD+I G STF+ E+NEAS IL N T +SLV+ DELG
Sbjct: 643 GSFVPAESATIGVVDKIFTRVGASDNISLGESTFMVEMNEASSILNNLTPRSLVLFDELG 702
Query: 882 RGTSTHDGVAIAYATLDYLLEHKKCM--VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
RGTST+DG++IA++ ++Y+ E+ + LF THY ++ +++ F ++VS
Sbjct: 703 RGTSTYDGISIAWSIVEYIHENTRARAKTLFATHYHELNEMEKSFP-RCKNFNVSV---- 757
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ D V +L K+VPG SE SFG VA++A +PPS + RA I +LE
Sbjct: 758 -------KEVDNKVIFLRKLVPGGSEHSFGIHVARMAGMPPSVVKRANEILGELE 805
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASI---- 145
TPL +Q +K KYPD +L+ VG + F +DA AA++LGI N +SI
Sbjct: 11 TPLMKQYYSIKGKYPDAILLFRVGDFYETFSDDAVKAAEILGITLTKRANGSASSIELAG 70
Query: 146 -PTFRLNVHVRRLVNAGFKVGVVKQTE 171
P L+ ++ +LV AG +V V Q E
Sbjct: 71 FPHHALDTYLPKLVRAGQRVAVCDQLE 97
>gi|381402138|ref|ZP_09927017.1| DNA mismatch repair protein MutS [Kingella kingae PYKK081]
gi|380832869|gb|EIC12758.1| DNA mismatch repair protein MutS [Kingella kingae PYKK081]
Length = 850
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 308/602 (51%), Gaps = 73/602 (12%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
+ L A T + LE+ S G + TL +++ +T GSRLL W+ HPL +R+ + ARL
Sbjct: 263 IALDAATRRNLEITATLS-GKKSPTLFSVLDKCVTHMGSRLLAHWLHHPLRNRDYVQARL 321
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV+ ++ QH+ + + SL DI+R RI
Sbjct: 322 DAVA-------------ALLQHN----------------FADISNSLKNMADIERIAARI 352
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
TA P + A+ A+L Q+Q T K S+LL L A PAV
Sbjct: 353 ALGTARPRDLSALRDALL----QVQ------------TIKLPPSSLLD--TLAACFPAVR 394
Query: 583 GKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRK--Q 640
A L + + E + L + +I++ +++ R + L L N R+ Q
Sbjct: 395 DTATLLQAALLPEPSVW--LKDGNVINDNYHADLDELRHLQTHGGDFLRDLENRERERTQ 452
Query: 641 LGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALAN 698
L +EF V G IEL N P ++ + + K R+ +PE+ D+ A
Sbjct: 453 LSTLKVEFNRVHGF--YIELSKNQAELAPSDYQRRQTLKNAERFITPELKAFEDKFLQAQ 510
Query: 699 EELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHE 758
E + + ++ + A+ Q +A+A LD L + A ++ ++++ P F E
Sbjct: 511 ERALALEKTLFEQLISSLQTQLAQIQQTAKAVATLDVLCSFAHTAQTQHYIMPQF---SE 567
Query: 759 PVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIM 818
+IHI +GRHPV++ + F PN+T L+ + C ++TGPNMGGKS Y+RQVALI ++
Sbjct: 568 QAEIHIHNGRHPVVEQ-QVTRFTPNNTALNTAQRLC-LLTGPNMGGKSTYMRQVALIALL 625
Query: 819 AQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVD 878
A GSFVPA A + +D I+TR+GASD + RSTF+ E++E +YIL + TAQSLV++D
Sbjct: 626 AHTGSFVPAEHALIGKIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATAQSLVLMD 685
Query: 879 ELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS 938
E+GRGTST DG+A+A+A ++LL+H + + LF THY ++ + +G+ H+S L
Sbjct: 686 EVGRGTSTFDGLALAHAIAEHLLQHNQSLSLFATHYFELTRLPEHQSGAFNQ-HLSAL-- 742
Query: 939 HKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
+ QD+ +L+++ G +E S+G VA+LA LPP + A LE + +
Sbjct: 743 ---------EQGQDIVFLHQIQDGAAEKSYGIAVAKLAGLPPIALKSARRHLRDLEVQAA 793
Query: 999 SR 1000
R
Sbjct: 794 DR 795
>gi|313204209|ref|YP_004042866.1| DNA mismatch repair protein muts [Paludibacter propionicigenes WB4]
gi|312443525|gb|ADQ79881.1| DNA mismatch repair protein MutS [Paludibacter propionicigenes WB4]
Length = 870
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 249/925 (26%), Positives = 420/925 (45%), Gaps = 146/925 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TP+ +Q E+K K+PD +L+ G + F DA A+++LGI N A
Sbjct: 8 TPMMKQFNEIKAKHPDAILLFRCGDFYETFSTDAIQASQILGITLTKRANGAGKTVELAG 67
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T
Sbjct: 68 FPHHALDTYLPKLVRAGRRVAICDQLEDPKLTKK------IVKRGVTELVTPG------- 114
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
V + + N + V + N +GV ++ISTG+ + E N
Sbjct: 115 VSYSDTTLNHKENTFLASVHLNKN---------------HVGVSFLDISTGEFLVAEGNA 159
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L S P E+L + K E A+ G AL
Sbjct: 160 EYV----DKLLNSFGPKEVLYDRSKKKDFE----AFFGTK-------------FFTYALE 198
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
+ ++ E L + E +N+ +G G+ N+P+ V A A+ + +L Q
Sbjct: 199 DWAYSPDSANERLLKHFEIKNL----KGF------GVDNLPNGVVAAGAI-MHYLDQTHH 247
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
++ + + + L T++ LE+ + + G+ TLL +++ T++ G+R+L
Sbjct: 248 QQTGHI-TQLSRIEEERFVWLDRFTVRNLELYGSINEGAR--TLLDVIDKTISPMGARML 304
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
+RW+ PL D I+ RL SV +H KN D+ ++ Q ++
Sbjct: 305 KRWIAFPLKDVKPINERL-----------------SVVEHFFKNPDLKLLLEQNVALIG- 346
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI-----DGEYREKV 559
D++R I+++ P E + + A+ K ++ + + D + K+
Sbjct: 347 ---------DLERIISKVAVGRINPREVVQLKVAL----KAIEPIKLACSQSDNDTLRKI 393
Query: 560 TSKTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
+ A++ I + P I + L S V+ E D L + S F +
Sbjct: 394 ADQLNACAVISEKIDKEIDNDPPNFIHRGGVLKSGVDAEL----DELRQLAYSGKDFLQK 449
Query: 617 ARARKAVQSAKEELD-SLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNS 675
+ R++ ++ L S N+ + +RN+ KVP W + +
Sbjct: 450 IQERESAETGIPSLKISFNNVFGYYIEVRNMH---------------KDKVPETWIRKQT 494
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY + E+ +++ A E++ + ++ + Y Q +A LDC
Sbjct: 495 LVNAERYITQELKVYEEKILGAEEKILSIEIRLFNDLVLSLVDYITAIQLDSNLIAQLDC 554
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L + +S +VRP D + I GRHPV++ L ++++ ND L E +
Sbjct: 555 LLSFTRVSSENKYVRPQVTDTD---VLEIKQGRHPVIEKQLPIGESYIANDVYLDNETQQ 611
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS +RQ A+I +MAQ+G FVPA SA + V+D I+TR+GASD+I QG S
Sbjct: 612 IIIITGPNMSGKSALLRQTAIITLMAQIGCFVPAESASIGVVDKIFTRVGASDNISQGES 671
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVLFV 911
TF+ E+NEA+ IL N + +SLV+ DELGRGTST+DG++IA+A ++Y+ E C LF
Sbjct: 672 TFMVEMNEAASILNNLSNRSLVLFDELGRGTSTYDGISIAWAIVEYIHEQVSCKAKTLFA 731
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ F + Y+VS + D+ V +L K+V G SE SFG
Sbjct: 732 THYHELNEMEKSF-HRIKNYNVSV-----------KEVDKKVIFLRKLVRGGSEHSFGIH 779
Query: 972 VAQLAQLPPSCISRATVIAAKLEAE 996
VA++A +P S + R+ I +LE +
Sbjct: 780 VAKMAGMPQSIVKRSEQILKQLETD 804
>gi|442804336|ref|YP_007372485.1| DNA mismatch repair protein MutS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740186|gb|AGC67875.1| DNA mismatch repair protein MutS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 870
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 254/925 (27%), Positives = 428/925 (46%), Gaps = 138/925 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K TP+ QQ +E K +Y D LL +G + F EDAE+A++ L I LD
Sbjct: 2 KLTPMMQQYIETKKQYQDCLLFFRLGDFYELFFEDAEIASRELEIALTGRDCGLDERAPM 61
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+P + ++ +L+N G+KV + +Q E A+ G R ++ + T T+
Sbjct: 62 CGVPWHSAHHYIAKLINKGYKVAICEQMEDPALAK------GIVKREVTRVITPGTVTDP 115
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
E + + +N+L+ V RN G+ +++TG+ +
Sbjct: 116 EMLDEKK------NNFLMSVYCS-------RN---------YFGIAVADVTTGEFYTTQL 153
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
G + L + P+ELL+ Q K L + + + F A
Sbjct: 154 IYGNTVNKLFDEIYRYQPSELLVNQQFLKNVPGETLDILKERMGIYITPLDDEYFDRNKA 213
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT-IRHLKQ 381
L+ + + G +++ +E + G A+ G + + Q + L I+ +++
Sbjct: 214 LSGIKNY---KGCNSIEQDE---FALCASG----ALIGYLKV----TQKVDLNHIKEIQK 259
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ +E M + +S R ++E+T E LR+ + GTLL +++ T+T G
Sbjct: 260 YKIENYMIIDSSSRR---NLELT---------ETLRDRK---KRGTLLWVLDRTMTAMGG 304
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLL R I L V EI R ++V + +K + I
Sbjct: 305 RLL----------RKWIEQPLLDVDEIN------RRLDAVEELKDK-----------FMI 337
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV------MQAILYAGKQLQQLHIDGEY 555
S + L + D++R +++ + +A+ + +IL L+ G
Sbjct: 338 RSELRELLKKVYDMERLASKLVVGNVNARDLLALKASMGQIPSILDLMSDLKTELCVG-I 396
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
R+++ L+ + I A P V K D G II +G +
Sbjct: 397 RDEIDHMNDIYELIDKSI--AEDPPVTIK-------------DGG------IIRDGYSED 435
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-KVPLNWAKV 673
V RKA K+ + L R+ G++NL+ + IE+ AN +VP + +
Sbjct: 436 VDTYRKAFTEGKQWIADLEAKERELTGIKNLKVRYNKVFGYYIEVTKANLSQVPDRYIRK 495
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ R+ + E+ D + A E++ + + ++ Q LA L
Sbjct: 496 QTLVNGERFITEELKKLEDTILGAEEKVKNLEYELFCEIREKIAAEVHRIQRTADRLAQL 555
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAERE 792
D L +LA ++ +N+V+PV HE +I I GRHPV++ +L + FVPND L+ + +
Sbjct: 556 DVLCSLAEVADRENYVKPVV---HEGSEIDIKDGRHPVVEKVLGSSPFVPNDAYLNDDTD 612
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
IITGPNM GKS Y+RQVALI +MAQ+GSFVPAS A + ++D I+TR+GASD + G+
Sbjct: 613 RVIIITGPNMAGKSTYLRQVALIVLMAQMGSFVPASKATIGIVDRIFTRVGASDDLASGQ 672
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLF 910
STF+ E+ E + IL N T +SL+I+DE+GRGTSTHDG+AIA++ ++Y+ + + C LF
Sbjct: 673 STFMVEMTEVANILNNATPRSLLILDEIGRGTSTHDGLAIAWSVIEYINDKSRLGCRTLF 732
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ +++ K TG + + K ++ +L K++PG ++ S+G
Sbjct: 733 ATHYHELTELEDKLTG-IKNCCIEV-----------KKRGDEIIFLRKIIPGGADQSYGI 780
Query: 971 KVAQLAQLPPSCISRATVIAAKLEA 995
+VA LA +P I RA I +L+A
Sbjct: 781 EVAGLAGVPELVIERAKHILNELDA 805
>gi|385330787|ref|YP_005884738.1| DNA mismatch repair protein MutS [Marinobacter adhaerens HP15]
gi|311693938|gb|ADP96811.1| DNA mismatch repair protein MutS [Marinobacter adhaerens HP15]
Length = 876
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 251/927 (27%), Positives = 412/927 (44%), Gaps = 138/927 (14%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL--- 136
S+ T K+TP+ QQ +++K ++P+ L+ +G + F EDA+ AA+++ I
Sbjct: 2 SAAQTDLSKHTPMMQQYLKIKGQHPNELVFYRMGDFYELFYEDAKKAAELMDITLTARGQ 61
Query: 137 --DHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY 194
+ A IP ++ RLV AG + + +Q A GP R + +
Sbjct: 62 SGGNPIPMAGIPYHSSEGYIARLVRAGQSIAICEQIGDPATSK------GPVDRQVVRIV 115
Query: 195 TKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR--LGVVAVEI 252
T TL DD + R+ + ++ R G +++I
Sbjct: 116 TPGTLS------------------------DDAYLEDRRDNLLVAIYNHREQFGFASLDI 151
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
S+G E + L+ L L PAE+L+ + E +L + G +R +
Sbjct: 152 SSGRFAVSELEN---LEALQGELQRLRPAEILISEDFP--YEDVLEGFTG----IRRQGP 202
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
L+E+ + ++ Q D+ G +N+ A L
Sbjct: 203 W---------------LFESDTARRVITHQLQVRDLTGFGCEE------LNLAVCAAGCL 241
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+ ++ L I L R + + L A + + LE+ N G +Y TL +M
Sbjct: 242 LQYAKETQRTALPHIRKLTRERRDEA----VILDAASRRNLEIDTNLMGGHQY-TLAWVM 296
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+ T T G R LRRW+ PL D ++ R AVS + + G H
Sbjct: 297 DRTATSMGGRELRRWLNRPLRDVEIVRQRQQAVSALLD-----------GFH-------- 337
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
Y + +L ++G DI+R + R+ R+A P + +A ++ A LQ+
Sbjct: 338 ------YEPVHDLLKAVG---DIERVLARVALRSARPRD-LARLRDAFQALPDLQE---- 383
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISN 610
T K ++S + RL +IG+ +L + + D ++ +I
Sbjct: 384 -------TLKPVNSHHVVRL------ATIIGEYPELADLLERAIIDNPPVVIREGGVIRE 430
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPL 668
G E+ R ++A + L + R + G+ L+ + V G I + + P+
Sbjct: 431 GFDEELDELRNISENAGQYLLDVETRERDRTGISTLKVGYNRVHGYYIEISRAQSDQAPV 490
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
++ + + K R+ +PE+ D+ A + +D L+ G A Q A Q
Sbjct: 491 DYIRRQTLKNAERFITPELKEFEDKALSAKSRALAREKGLYDDVLETVAGQLAPLQDAAQ 550
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLH 788
ALA LD L A + + F P F E I GRHPV++ +L + FVPND +
Sbjct: 551 ALAELDVLSNFAERATSLRFSAPEF---SESPGFDIEEGRHPVVEQLLDEPFVPNDLLMD 607
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+R +ITGPNMGGKS Y+RQ ALI ++A GSFVPA+ A + +D I+TRMG+SD I
Sbjct: 608 TQRRML-VITGPNMGGKSTYMRQAALIALLAYTGSFVPANRAVIGPVDRIFTRMGSSDDI 666
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
GRSTF+ E+ E + IL N T SLV++DE+GRGTST DG+++A+AT ++L +C
Sbjct: 667 AGGRSTFMVEMTETANILHNATEHSLVLMDEVGRGTSTFDGLSLAWATAEHLAREIRCYT 726
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ + + +V +LT+ ++ D + +L+ V G + S+
Sbjct: 727 LFATHYFELTQLADELQHAVNV----HLTA--------TEHDDSIVFLHNVHDGPASQSY 774
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEA 995
G +VA+LA +P I A + LE
Sbjct: 775 GLQVAKLAGVPQDVIRNAKTQLSHLEG 801
>gi|336375399|gb|EGO03735.1| hypothetical protein SERLA73DRAFT_119383 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388457|gb|EGO29601.1| hypothetical protein SERLADRAFT_365596 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1215
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 252/886 (28%), Positives = 395/886 (44%), Gaps = 116/886 (13%)
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETA--------AIKAHGPGKAGP------FGRGL 190
+P N + + G+KVG V Q ETA A K G A R L
Sbjct: 366 VPEMSFNFWAAKFLGKGYKVGRVDQAETALGAEMRMAADKTKGKPSADKGKEKIHIRREL 425
Query: 191 SALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
+ +YT TL ED+ E ++ + + + +D +V K G F G+ +
Sbjct: 426 NKVYTNGTL-VDEDLLTDE-----QAGHCISIREDTSDVKK------GSSF----GLCVL 469
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRV 309
+ +T F+D + LE ++ L P E++ + LS T ++L A PA+ +
Sbjct: 470 DSATSQFDLSAFDDDVCMTKLETMMRQLRPEEVIFTKGNLSVPTSRLLKAIL-PAACLWT 528
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL-- 367
+ F + E+ +++ ++ + E N VPE GI +M
Sbjct: 529 SLRDVEGFPYDQTIKELNNMFAGDEDEDVDGEEALNSAVPE---------GIKDMAGCRD 579
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
A++AL T+ +L+Q +++ + +F L + L TL +EV N+ G++
Sbjct: 580 AIEALGATLWYLRQLNIDKDLFSMKNFNVYDPLKKGQNLVLDGQTLAHIEVFVND-EGTD 638
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
GTL ++ +T +G RL R W+ PL + I+ARLDAV E++ + T E
Sbjct: 639 EGTLHKLLGRCITPFGKRLFRIWLCVPLRNVTDINARLDAV----EALMDHETFEET--- 691
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRS-PDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
T L + PD++R ++RI + +F+ V+ A
Sbjct: 692 ---------------------FTDLAKGLPDLERIVSRIHAKNCKIKDFMKVLAAFRKLN 730
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
L +L E E SKT+ S L LT P + ++ + V+K D
Sbjct: 731 MGLGKLTDSSETFE---SKTITSLLRSAPDLT---PHIKNVESRFI--VDK------DTD 776
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGIT--HLIELP 661
NL+ + G+ + +E LDS + K+LG+ + S G +L++
Sbjct: 777 NLLPV-EGKDDVYDEVMAEITELEETLDSQLRKFEKKLGITLTWWHSAQGNKEIYLVQTK 835
Query: 662 ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
K +P +W K TK R+ P + + + +L A E + + EF
Sbjct: 836 VGQKNIPDDWTKSGGTKAAARWLVPSLQSTIRKLKEARENRNTAIKEFKNRLYAEFDADR 895
Query: 721 AEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
+ AV+ LA LDCL +LA SR + RP FV+ + I RHP L + L +
Sbjct: 896 GVWLRAVRVLAELDCLFSLAKSSRALGEPLCRPEFVE-GDAAWIDFKELRHPAL-SGLRE 953
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
+F+PND L E ++T +R A IMAQ+G FVPA SA L +D I
Sbjct: 954 DFIPNDVRLGGEMSRVALLT--------VAMRMTATGVIMAQLGMFVPAKSARLCPVDTI 1005
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
TRMGA D++ STF EL+E ILR+ T +S VI+DELGRGTST+DG+AIA A L
Sbjct: 1006 LTRMGAYDNMFSNASTFKVELDECCKILRDATPKSFVILDELGRGTSTYDGMAIAGAVLH 1065
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
L H + F THY + S YH + H M + ++ +LYK
Sbjct: 1066 QLATHTLPLAFFATHYGTLT--------SDFAYHPNVRNMH--MATLLDDEKCELVFLYK 1115
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNR 1004
+V G++ESSFG VA LA +P + RA V++ + +R++ +
Sbjct: 1116 LVEGIAESSFGTHVASLAGVPTEVVKRAEVVSEDFAKKFKARLEGK 1161
>gi|366087626|ref|ZP_09454111.1| DNA mismatch repair protein MutS [Lactobacillus zeae KCTC 3804]
Length = 857
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 251/967 (25%), Positives = 422/967 (43%), Gaps = 177/967 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +K +YPD L +G + F +DA A++L + D A
Sbjct: 8 TPMMQQYNAIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELTLTARNKSADDPIPMAG 67
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P + +V L++ G+KV + +Q E P KA G R + L T T
Sbjct: 68 VPHHAVQSYVDILIDHGYKVAICEQME-------DPKKAVGMVKRAVIQLITPGT---NV 117
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
D+ G +NY+ V+ G G+ G ++STG++ +
Sbjct: 118 DIKAG---AAKTNNYITAVLPHAG------------GYAFAYG----DVSTGELKVTDLK 158
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
F LE L +L+ E+++ + L+ ML
Sbjct: 159 SKF---ALENELSALATKEIVVPEDLTDDDAAML-------------------------- 189
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFG 383
GE LS Q + + EG DL A A ++ L +
Sbjct: 190 --------KKGERLLS----------VQPDSQPTSEGSYVSQDLTDPAEAAVVQMLMAY- 230
Query: 384 LERIMCLGASFRSL-----------SGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
L RSL S +EM A + L++L+N+ G + TLL ++
Sbjct: 231 -----LLNTQKRSLAHIQRAVAYQPSAYLEMDQDARS--NLDILQNSRTGRKGDTLLSLL 283
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+ T T G RLL++W+ PL D IS R + V ++ +
Sbjct: 284 DATKTAMGGRLLKQWLERPLLDIGAISVRQNQVQDLLD---------------------- 321
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQLH 550
++ S + L + D++R R+ T + I + ++ + A + +
Sbjct: 322 -----HFFERSELQERLTKVYDLERLAGRVAFGTVNGRDLIQLQTSLDQVPAIQDVLSKL 376
Query: 551 IDGEY---REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
DG + R K+ + + L++R I P + +L NK+
Sbjct: 377 DDGSFKALRGKIDPVSDVAGLIRRAI-EPEPPISVTDGGLILRGYNKK------------ 423
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANF-K 665
+ R A++++K+ + L RK G+ NL+ + IE+ +N K
Sbjct: 424 --------LDEYRDAMKNSKQWIAELEASERKATGIHNLKIRYNKVFGYFIEVTKSNLDK 475
Query: 666 VPL-NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQ 724
VP + + + R+ +PE+ + A E T + + + Q
Sbjct: 476 VPEGRYERKQTLTNAERFITPELKEKETLILEAQESSTALEYDLFQDIRDQVKAQIKRLQ 535
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVF-VDDHEPVQIHICSGRHPVLDTIL-LDNFVP 782
A ++ALD L + AT++ N ++VRP H+ I++ GRHPV++ +L D+++P
Sbjct: 536 ALAAQISALDVLQSFATVAENNHYVRPTMHAGTHD---INVKGGRHPVVEHVLGQDSYIP 592
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND + + + +ITGPNM GKS Y+RQ+ALI IMAQ GSFVPA +A+L + D I+TR+
Sbjct: 593 NDVIMDQDTDML-LITGPNMSGKSTYMRQLALIVIMAQAGSFVPADAADLPIFDQIFTRI 651
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GA+D + G STF+ E+ EA+ L + TA SL++ DE+GRGT+T+DG+A+A A ++YL +
Sbjct: 652 GAADDLANGESTFMVEMLEANAALSHATASSLILFDEIGRGTATYDGMALAQAIIEYLHD 711
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
H LF THY ++ + + HV + H ++ +L+K++PG
Sbjct: 712 HVHAKTLFSTHYHELTSLSDSL-AKLKNVHVGAVEEHG-----------NLVFLHKMMPG 759
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR--DLLVKLSDQEQE 1020
++ S+G VA+LA LPP + RA I +LEA + +A + D + L ++ +
Sbjct: 760 PADKSYGIHVAKLAGLPPDLLDRADTILQQLEAATPEKTVPAAASQVTDQQLSLFEEPKP 819
Query: 1021 AQENMPV 1027
+N P+
Sbjct: 820 QPKNSPI 826
>gi|339640062|ref|ZP_08661506.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 056
str. F0418]
gi|339453331|gb|EGP65946.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 056
str. F0418]
Length = 841
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 239/933 (25%), Positives = 420/933 (45%), Gaps = 152/933 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K +P QQ +++K Y D L+ +G + F EDA AA++L I + ++
Sbjct: 4 EKLSPGMQQYLDIKKDYQDAFLLFRMGDFYELFYEDAVNAAQILEIAITSRNKNSENPIP 63
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ LV +G+KV + +Q E P +A G R + + T T+
Sbjct: 64 MAGVPYHSAQQYIDTLVESGYKVAIAEQME-------DPKQAVGVVKREVVQVITPGTVV 116
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ GE+N+LV + ++G G ++ D+ G
Sbjct: 117 DS-------SKSSGENNFLVSLDREEGQYG---------------------LAYMDLATG 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
EF + +L+ + G+ + Q ++++ YA P S +V
Sbjct: 149 EFQ-----------VTTLADFDQACGEIRNLQAREVVVGYALPESEEKV----------- 186
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM--NMPDLAVQALALTIRH 378
L+ M+L + ED L DV G+ S +E + + Q + H
Sbjct: 187 --LSNQMNLLLSRVEDVLE-------DVQLLGDELSPLEKRVAGKLLHYVFQTQMRELSH 237
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
LK+ + ++M + T L+++ N G ++G+L +M+ T
Sbjct: 238 LKK----------VHHYEIKDFLQMDYATKT--SLDLIENARTGKKHGSLFWLMDEAKTA 285
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLLR W+ HPL D++ I+ R D V +S
Sbjct: 286 MGGRLLRSWIQHPLIDKDRITKRQDVVQVFLDS--------------------------- 318
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--HIDGEYR 556
++ S + SL DI+R +R+ P + + + + + Q++ + +I
Sbjct: 319 FFERSDLSDSLRGVYDIERLASRVSFGKTNPKDLLQLASTLSHV-PQIRAILENIASPAL 377
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
E + SK L+ LI +A SP A+++++ N II +G +
Sbjct: 378 ETLVSKLDAIPELENLISSAISP----DASQVITEGN-------------IIQSGFDETL 420
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
+ R ++ + + R G+ NL ++ G + VP ++ +
Sbjct: 421 DKYRLVMREGTSWIADIEAKERATSGISNLKIDYNKKDGYYFHVTNSQLGHVPSHFFRKA 480
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K + RY + E+ ++ A E+ + + +E G Y QA Q LA +D
Sbjct: 481 TLKNSERYGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQALAQTLATID 540
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREY 793
L + A ++ N++ VRP F + + I GRH V++ ++ +++PN + A+ +
Sbjct: 541 VLQSFAVVAENQHLVRPSFTANR---TLKIEKGRHAVVEKVMGAQSYIPNSVVMDADTD- 596
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
Q+ITGPNM GKS Y+RQ+A+I IMAQ+GS+VPA A L + D I+TR+GA+D + G+S
Sbjct: 597 IQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVPAELAVLPIFDAIFTRIGAADDLVSGQS 656
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ +R + SL++ DELGRGT+T+DG+A+A A ++Y+ + K LF TH
Sbjct: 657 TFMVEMMEANRAIRQASEHSLILFDELGRGTATYDGMALAQAIIEYIHDRTKAKTLFATH 716
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ ++ T + HV+ L + D VT+L+K+ G ++ S+G VA
Sbjct: 717 YHELTELSTSLP-RLENLHVATL-----------EKDGQVTFLHKIEEGPADKSYGIHVA 764
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSRVQNRSA 1006
++A LP + RA I LE++ V + A
Sbjct: 765 KIAGLPVDLLERADSILTHLESQDKQVVSQQKA 797
>gi|312870746|ref|ZP_07730853.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 3008A-a]
gi|329919600|ref|ZP_08276589.1| DNA mismatch repair protein MutS [Lactobacillus iners SPIN 1401G]
gi|311093758|gb|EFQ52095.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 3008A-a]
gi|328937405|gb|EGG33827.1| DNA mismatch repair protein MutS [Lactobacillus iners SPIN 1401G]
Length = 854
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 242/957 (25%), Positives = 431/957 (45%), Gaps = 161/957 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + + G+ G+ ++STG
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSN------------SQGW----GLTYCDLSTG----- 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI-- 318
E+ L+ E+++ + LS QT +++ + + F+
Sbjct: 149 -----------ESYATHLTSWEMIVNELLSLQTRELVYG--------ETLTSDKQIFLKK 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
G L++ + L + E + V +Q +++ I + + ++ H
Sbjct: 190 AGITLSQPVKLSKEHAEISY---------VTQQLHNQLEIAATKQLLAYLLATQKRSLAH 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L+ +S + + +S LE++++ G + G+L +++ T T
Sbjct: 241 LQ------------VTQSYEPNQYLQMSHIVQTNLELIKSAKTGKKMGSLFWLLDKTSTA 288
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL+ W+ PL + I +R V+ + +
Sbjct: 289 MGGRLLKSWIERPLISLSEIKSRQLVVTALFDD--------------------------- 321
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDG 553
Y+ ++ L D++R R+ +A E + + ++ + + L +
Sbjct: 322 YFSREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLN 381
Query: 554 EYREKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+ +K+ K +H ++K ++ +P LST KE II +G
Sbjct: 382 NFAQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKSGV 419
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN- 669
S++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+
Sbjct: 420 SSQLDRYRDAMMNGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKDKVPLDR 479
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY + E+ + A + T + + + ++ Y Q +
Sbjct: 480 YMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQ 539
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
L++LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND +
Sbjct: 540 LSSLDVLSTFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD 597
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 598 -EQTNIFLITGPNMSGKSTYMRQLALIIIMAQMGCFIPADSAVLPIFDKIFTRIGAGDDL 656
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
G+STF+ E++EA+ L+N T +SL++ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 ISGKSTFMVEMSEANIALKNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKT 716
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ D+ + + HV ++ + + +L+K++PG ++ S+
Sbjct: 717 LFATHYHELTDLDQEL-AHLKNIHVGA-----------TQENGHLIFLHKILPGAADQSY 764
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
G VAQLA LP + AT + +LE ++ + DL K+SD+EQ+
Sbjct: 765 GIHVAQLAGLPTKVLREATHMLKQLEKHSDNQAAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|386814179|ref|ZP_10101403.1| DNA mismatch repair protein MutS [planctomycete KSU-1]
gi|386403676|dbj|GAB64284.1| DNA mismatch repair protein MutS [planctomycete KSU-1]
Length = 866
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 260/928 (28%), Positives = 426/928 (45%), Gaps = 159/928 (17%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI----YAHLDHNFMTASIPTFR 149
+Q E+K ++ D LL +G + F EDA++A+KVLGI + +++ A +P
Sbjct: 3 RQYNEIKIQHKDALLFFRMGDFYELFFEDAKLASKVLGITLTSRSKGENSIPMAGVPHHS 62
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDVGGG 208
++R+L+ AG KV + Q + P +A G RG++ + T T+ ED
Sbjct: 63 AESYIRKLIKAGHKVAICDQLQ-------NPEEAKGIVDRGVTRIITPGTV--TED-SLL 112
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFG-DGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
ED +NYL+ +++ N +FG D+ G VE D ++ EF
Sbjct: 113 EDKS---NNYLMALLET--------NTLFGLSWIDLSTGRFEVEDIQKDRLFDEFA---- 157
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE-----CASRDCFIGGGA 322
L+P+ELL+ E+ + +R E A D
Sbjct: 158 ---------RLNPSELLM-------PEETFHNHTAFVEKIRAEYNIMITARPDWEFSKDT 201
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
+++ E+ G +L + +++ P G + I+ + + ++RH+ +
Sbjct: 202 AYHILT--EHFGTTSLEGFDCEDVG-PALGAAGAVIQYLKDTQ-------KTSLRHIIKI 251
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
R A R L + T Q LE+ + G+LL I++ T T G+R
Sbjct: 252 QRYR-----ADNRVL-------IDKATQQSLELTQTMRTHDREGSLLAIIDQTKTPMGAR 299
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LLR WV PL I R V E+ E +P+ L
Sbjct: 300 LLREWVISPLRISAEIKYRQVGVYELFE------------------------KPELRREL 335
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQ-----LQQLHIDGEY 555
++L+++ DI+R T+I A + IA+ Q++ L A K + + + E
Sbjct: 336 RNILSNIY---DIERISTKISCGRANARDLIALKQSLSKLPALKDQIGFCISDILVTTEQ 392
Query: 556 R----EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
+ E+V +TL A L S P K L+ A D+ L IS
Sbjct: 393 QLDTLEEV--QTLIGAAL------VSDPPPTIKDGGLIREGYDPALDE-----LKYISKN 439
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWA 671
S +A +A + A+ ++SL K G ++ V+ I H+ +P +
Sbjct: 440 GKSWIANF-QAEEIARTGINSLKVGYNKVFGY----YIEVTNI-HMDNIPKTY------I 487
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK---EFGGYYAEFQAAVQ 728
+ + K R+ +PE+ ++ A+E +D F++ + + + Q +
Sbjct: 488 RKQTLKNAERFITPELKDYETKVLTADER---AKDLEYDLFIRIREKVSAFTPQIQKISE 544
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNL 787
+A +D L LA L+ ++ P D ++++I GRHPVL L+ ++FVPND NL
Sbjct: 545 TIALIDVLSTLANLASENRYIMPEITDS---LELNIIDGRHPVLTRKLINESFVPNDINL 601
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
IITGPNM GKS YIRQVAL+ +MAQ+GSF+PA A + +D I+TR+GASD
Sbjct: 602 DGVNNKIMIITGPNMAGKSTYIRQVALLVLMAQIGSFIPAKEAVIGTVDRIFTRVGASDE 661
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ +G+STF+ E+NE + IL N TA+SL+I+DE+GRGTST DG++IA+A +Y+ +H
Sbjct: 662 LSRGQSTFMVEMNETANILNNATARSLIILDEVGRGTSTFDGISIAWAITEYIYQHIHAR 721
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ ++ F G + + + ++ +L K+V G ++ S
Sbjct: 722 TLFATHYHELTELALLFPGVIN------------FNILVKEWGDEIIFLRKIVEGGTDKS 769
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEA 995
+G VA+LA +P I RA +I LEA
Sbjct: 770 YGIHVARLAGIPKEVIQRARIILNNLEA 797
>gi|373454823|ref|ZP_09546686.1| DNA mismatch repair protein MutS [Dialister succinatiphilus YIT
11850]
gi|371935519|gb|EHO63265.1| DNA mismatch repair protein MutS [Dialister succinatiphilus YIT
11850]
Length = 853
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 184/598 (30%), Positives = 309/598 (51%), Gaps = 62/598 (10%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
+TLS L+ LE+ RN +G GTLL ++++T T G+RLL+RW+ PL D N I R
Sbjct: 256 LTLSEECLRNLEITRNMRDGGRKGTLLELLDYTHTAMGARLLKRWLERPLTDVNRIILRQ 315
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
D + E+ M +++T +E +LS V D +R ++RI
Sbjct: 316 DGIEELTNHM----------------TELTNLED----MLSQVF-------DFERILSRI 348
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
+ +P + +A ++A L ++++L + G S +LK++ A I
Sbjct: 349 EANSTSPKDLLA-LKASLRMIPEIKKL-LSGA----------GSVILKKI------NAQI 390
Query: 583 GKAAKLLSTVNKEAADQG--DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQ 640
G + +++ + G ++ + I G +E+ R +++++ + L + +
Sbjct: 391 GIHGPVFDLLDRSMNENGTGNVRDGKYIKEGFSAELDEVRSLSENSQQYIADLEEREKTK 450
Query: 641 LGMR-NLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANE 699
G++ + F +V G I +P + + + RY +PE+ + A E
Sbjct: 451 TGIKLKIGFNNVFGYYFEISNANKIPIPPYYMRKQTLVNAERYITPELKEFEAKALTAKE 510
Query: 700 ELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEP 759
+ + + + E + Q +ALAALDC+ +LA + + RP + E
Sbjct: 511 KTEELELKIYQAVKAEIRPEIPDMQKTARALAALDCIASLARAALKDRYTRPRITNSREG 570
Query: 760 VQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIM 818
+I I GRHP+++ L + FVPNDT L+ + +ITGPNM GKS Y+RQVA++ IM
Sbjct: 571 -RISIQDGRHPMVEHALKREMFVPNDTELNHHDQEILVITGPNMAGKSTYMRQVAVLTIM 629
Query: 819 AQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVD 878
AQ GSF+PA SA +D I+TR+GA+D I G+STF+ E+ E S+ILR+ T SL+++D
Sbjct: 630 AQTGSFIPAKSASFSPVDRIFTRVGATDDISTGQSTFMVEMQEVSHILRHATRNSLILLD 689
Query: 879 ELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS 938
E+GRGTST+DG++IA A ++Y+ LF THY +++ + + + Y VS
Sbjct: 690 EIGRGTSTYDGMSIARAVVEYIDRKIHGFTLFATHYHELS-VMADESSHIKNYTVSV--- 745
Query: 939 HKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ +++T+L +++PG ++ S+G VA+LA LP S + RA I LE E
Sbjct: 746 --------KERGKEITFLRRIIPGCADRSYGIHVARLAGLPESLLKRADEILQGLEEE 795
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 35/199 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMTAS 144
TPL +Q ++K +Y D LL +G + F +DA E+ + G A +
Sbjct: 4 TPLMEQYKKVKDQYRDCLLFYRLGDFYELFYDDAVTASHELELTLTGKNAGAEGRVPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAE 203
+P +++ RL+ G+KV + +Q E P KA G R + + T T+
Sbjct: 64 VPFHAAEIYIYRLIQKGYKVAICEQLE-------DPKKAKGLVKRDVIRVITPGTILFEN 116
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ + NYL+ +++ D L V ++STG+ +G ++
Sbjct: 117 SIADKSN------NYLIYIMETDKE----------------LDAVLSDVSTGECWWGVWD 154
Query: 264 DGFLRSGLEAVLLSLSPAE 282
R +L SPAE
Sbjct: 155 KKKERDDFFDMLSVYSPAE 173
>gi|325911928|ref|ZP_08174331.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 143-D]
gi|325476230|gb|EGC79393.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 143-D]
Length = 854
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 247/955 (25%), Positives = 429/955 (44%), Gaps = 157/955 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + G+ G+ ++STG+
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSS------------SQGW----GLTYCDLSTGESYAT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ + LLSL EL+ G+ L+ +++ L AG + V+ +
Sbjct: 154 HLTSWEM---IVNELLSLQTRELVYGETLTSD-KQIFLKKAGITLSQPVKLS-------- 201
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
G AEV V +Q +++ I + + ++ HL+
Sbjct: 202 GEHAEVSY-------------------VTQQLHNQLEIAATKQLLAYLLATQKRSLAHLQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+S + + +S LE++++ G + G+L +++ T T G
Sbjct: 243 ------------VTQSYEPNQYLQMSHIVQTNLELIKSTKTGKKMGSLFWLLDKTSTAMG 290
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL+ W+ PL + I +R V+ + E Y+
Sbjct: 291 GRLLKSWIERPLISLSEIKSRQLVVTALFED---------------------------YF 323
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDGEY 555
++ L D++R R+ +A E + + ++ + + L + +
Sbjct: 324 SREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLNNF 383
Query: 556 REKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+K+ K +H ++K ++ +P LST KE II +G S
Sbjct: 384 AQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKSGVSS 421
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN-WA 671
++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+ +
Sbjct: 422 QLDRYRDAMINGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKNKVPLDRYM 481
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY + E+ + A + T + + + ++ Y Q + L+
Sbjct: 482 RKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQLS 541
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAE 790
+LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND + E
Sbjct: 542 SLDVLSTFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD-E 598
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 599 QTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFDKIFTRIGAGDDLIS 658
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ E++EA+ L+N T +SL++ DE+GRGT+T+DG+A+A A + YL + LF
Sbjct: 659 GKSTFMVEMSEANIALKNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKTLF 718
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ D+ + + HV ++ + + +L+K++PG ++ S+G
Sbjct: 719 ATHYHELTDLDQEL-AHLKNIHVG-----------ATQENGHLIFLHKILPGAADQSYGI 766
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
VAQLA LP + AT + +LE ++ + DL K+SD+EQ+
Sbjct: 767 HVAQLAGLPTKVLREATHMLKQLEKHSDNQAAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|316931934|ref|YP_004106916.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris DX-1]
gi|315599648|gb|ADU42183.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris DX-1]
Length = 907
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 251/939 (26%), Positives = 422/939 (44%), Gaps = 151/939 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K +P+ +Q E+K P +LL +G + F EDAE+A++ LGI HL +
Sbjct: 22 KMSPMMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIASRALGITLTKRGKHLGADIPM 81
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+P R + ++ RL+ G +V V +QTE A + R + L T TL
Sbjct: 82 CGVPVERSDDYLHRLIALGHRVAVCEQTED---PAAARARKSVVRRDVVRLITPGTLT-- 136
Query: 203 EDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
ED +NYL+ + G+ G R +G+ ++ISTG+
Sbjct: 137 ------EDTLLDARANNYLLAIARARGSSGADR-----------IGLAWIDISTGEFCVT 179
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVR----VECASRDC 316
E + G L A L ++P E ++ L E A +R V +RD
Sbjct: 180 ECSTG----ELAATLARINPNEAIVPDALYGDAEL--------APTLRELAAVTPLTRDV 227
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
F A + + + ++G+ + L A A +
Sbjct: 228 FDSATAERRLCDYFAV-----------------------ATMDGLAALSRLEATAAAACV 264
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
++ + L + L R SG+ M + T LE+ R + G G+LL ++ T+
Sbjct: 265 TYVDRTQLGKRPPLSPPAREASGTT-MAIDPATRANLELTRTLA-GERRGSLLDAIDCTV 322
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T GSRLL + + PL D I+ RLDAV A G
Sbjct: 323 TAAGSRLLAQRLAAPLTDAAAIARRLDAVEAFAADSG----------------------- 359
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
+ + +SL +PD+ R + R+ P + + I A + L QL G+
Sbjct: 360 ----LREQIRSSLRAAPDMARALARLSLGRGGPRDLANLRDGIRAADEVLTQL---GQLA 412
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFS 614
+ A L+R + +L + + + AD LL + + +G
Sbjct: 413 TPPQEISAAIAALQR------------PSRELCAELGRALADDLPLLKRDGGFVRDGYEP 460
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVN 674
+ RK +++ + S+ G++ L+ + + + +E+ A L A +N
Sbjct: 461 VLDETRKLRDASRLVVASMQARYADDTGIKTLKIRHNNVLGYFVEVSAQHGEKLMAAPLN 520
Query: 675 ST---KKT----IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+T ++T +R+ + E+ ++A A + + +D + +AA
Sbjct: 521 ATFIHRQTLAGQVRFTTAELGEIEAKIANAGDRALGLELEIFDRLSALIDAAGDDLRAAA 580
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL---DNFVPND 784
A A LD ALA L+ + N+VRP + E + I GRHPV++ L + F+ N
Sbjct: 581 HAFALLDVATALAKLASDDNYVRP---EVDESLSFAIEGGRHPVVEQALKKAGEPFIANA 637
Query: 785 TNLH---AERE-YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
+L A++ ++TGPNM GKS ++RQ ALI ++AQVGSFVPAS A + ++D +++
Sbjct: 638 CDLSPGPAQKSGQIWLLTGPNMAGKSTFLRQNALIALLAQVGSFVPASRARIGIVDRLFS 697
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+GA+D + +GRSTF+ E+ E + IL + ++LVI+DE+GRGT+T DG++IA+A +++L
Sbjct: 698 RVGAADDLARGRSTFMVEMVETAAILNQASERALVILDEIGRGTATFDGLSIAWAAIEHL 757
Query: 901 LEHKKCMVLFVTHYPKIADIKTK----FTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
E +C LF THY ++ + K F +V + +V +L
Sbjct: 758 HEQNRCRTLFATHYHELTALSAKLPRLFNATVRV----------------KEWRGEVVFL 801
Query: 957 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
++V+PG ++ S+G +VA+LA LP S ++RA + AKLEA
Sbjct: 802 HEVLPGSADRSYGIQVAKLAGLPASVVARAKTVLAKLEA 840
>gi|253687360|ref|YP_003016550.1| DNA mismatch repair protein MutS [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511172|sp|C6DAK6.1|MUTS_PECCP RecName: Full=DNA mismatch repair protein MutS
gi|251753938|gb|ACT12014.1| DNA mismatch repair protein MutS [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 854
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 261/939 (27%), Positives = 409/939 (43%), Gaps = 184/939 (19%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ LK ++P++LL +G + F +DA+ A+++L I A A
Sbjct: 12 HTPMMQQYFRLKAEHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ RLV G V + +Q A GP R + + T T+
Sbjct: 72 GVPHHAVENYLARLVQMGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L + D GF G ++IS+G E
Sbjct: 126 LLQEKQD------NLLAAIWQD------------SRGF----GYATLDISSGRFRVSEPT 163
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D R + A L +PAELL +
Sbjct: 164 D---RETMAAELQRTNPAELLYPESF---------------------------------- 186
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI--RHLKQ 381
E M L EN G R + PD A Q L L R L
Sbjct: 187 -ESMDLIEN-----------------RHGLRRRPLWEFE--PDTARQQLNLQFGTRDLTG 226
Query: 382 FGLERIM-------CL--------GASFRSLSG-SME-----MTLSANTLQQLEVLRNNS 420
FG+E+ CL S + G +ME + + A T + LE+ +N S
Sbjct: 227 FGVEQAKLALRAAGCLLQYAKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQNLS 286
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
G E TL +++ T+T GSR+L+RW+ P D + + R A+S +
Sbjct: 287 GGVE-NTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALQQRQQAISAL------------ 333
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
D+T P L L +G D++R + R+ RTA P + + A
Sbjct: 334 --------QDIT---PD----LQPYLRQVG---DLERILARLALRTARPRDLARMRHA-- 373
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG 600
QQ + RE++ + S ++RL+ ++IG+ +L + + +
Sbjct: 374 -----FQQF---PDIREQLAPLDIDS--VRRLV------SLIGQFDELRDLLERAVIEAP 417
Query: 601 DLL--NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITH 656
+L + +I+ G +E+ R A + LD L R++LG+ L+ F V G
Sbjct: 418 PVLVRDGGVIAPGYNAELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNGVHGYYI 477
Query: 657 LIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF 716
+ + VP+++ + + K RY PE+ D++ + + + +A +D
Sbjct: 478 QVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYDELFDLL 537
Query: 717 GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL 776
+ AE Q + ALA LD L LA + N+V P D +P I I GRHPV++ +L
Sbjct: 538 LPHLAELQQSAAALAELDVLTNLAERADTLNYVCPTLSD--KP-GIKITGGRHPVVEQVL 594
Query: 777 LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
+ F+ N +L +R IITGPNMGGKS Y+RQ ALI +MA +G FVPA A + +D
Sbjct: 595 REPFISNPLSLSPQRRML-IITGPNMGGKSTYMRQAALIVLMAHIGCFVPADQAVIGPVD 653
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
I+TR+GA+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A
Sbjct: 654 RIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWAC 713
Query: 897 LDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTY 955
+ L K M LF THY ++ + K G V + +D++ D + +
Sbjct: 714 AENLANRIKAMTLFATHYFELTTLPEKMEGVVNVH-------------LDAREHGDTIAF 760
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V G + S+G VA LA +P I RA +LE
Sbjct: 761 MHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLKELE 799
>gi|312875171|ref|ZP_07735184.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2053A-b]
gi|311089278|gb|EFQ47709.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2053A-b]
Length = 854
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 242/957 (25%), Positives = 430/957 (44%), Gaps = 161/957 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + + G+ G+ ++STG
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSN------------SQGW----GLTYCDLSTG----- 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI-- 318
E+ L+ E+++ + LS QT +++ + + F+
Sbjct: 149 -----------ESYATHLTSWEMIVNELLSLQTRELVYG--------ETLTSDKQIFLKK 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
G L++ + L + E + V +Q +++ I + + ++ H
Sbjct: 190 AGITLSQPVKLSKEHAEVSY---------VTQQLHNQLEIAATKQLLAYLLATQKRSLAH 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L+ +S + + +S LE++++ G + G+L +++ T T
Sbjct: 241 LQ------------VTQSYEPNQYLQMSHIVQTNLELIKSAKTGKKMGSLFWLLDKTSTA 288
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL+ W+ PL + I +R V+ + +
Sbjct: 289 MGGRLLKSWIERPLISLSEIKSRQLVVTALFDD--------------------------- 321
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDG 553
Y+ ++ L D++R R+ +A E + + ++ + + L +
Sbjct: 322 YFSREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLN 381
Query: 554 EYREKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+ +K+ K +H ++K ++ +P LST KE II G
Sbjct: 382 NFAQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKAGV 419
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN- 669
S++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+
Sbjct: 420 SSQLDRYRDAMMNGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKDKVPLDR 479
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY + E+ + A + T + + + ++ Y Q +
Sbjct: 480 YMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQ 539
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
L++LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND +
Sbjct: 540 LSSLDVLATFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD 597
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 598 -EQTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAALPIFDKIFTRIGAGDDL 656
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
G+STF+ E++EA+ L+N T +SL++ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 ISGKSTFMVEMSEANIALKNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKT 716
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ D+ + + HV ++ + + +L+K++PG ++ S+
Sbjct: 717 LFATHYHELTDLDQEL-AHLKNIHVG-----------ATQENGHLIFLHKILPGAADQSY 764
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
G VAQLA LP + AT + +LE ++ + DL K+SD+EQ+
Sbjct: 765 GIHVAQLAGLPTKVLREATHMLKQLEKHSDNQAAFSDEQLDLFGSSDQPKMSDEEQD 821
>gi|386815603|ref|ZP_10102821.1| DNA mismatch repair protein MutS [Thiothrix nivea DSM 5205]
gi|386420179|gb|EIJ34014.1| DNA mismatch repair protein MutS [Thiothrix nivea DSM 5205]
Length = 857
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 249/922 (27%), Positives = 415/922 (45%), Gaps = 146/922 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K +YPD+LL +G + F EDA+ AA +L I +
Sbjct: 6 QHTPMMQQYLRIKAEYPDILLFYRMGDFYELFMEDAKKAAALLDITLTSRGSSGGEPIAM 65
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
A +P + ++ +L+ G V + +Q P K+ GP R ++ L T T
Sbjct: 66 AGVPYHAVEQYLAKLLKLGESVAICEQV-------GDPAKSKGPVERKITRLLTPGT--- 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V N L+ V + G GK G+ +++STG E
Sbjct: 116 ---VTDDYLLDDRRDNLLMAVCGEKG--GKT------------YGIACIDLSTGRFTVQE 158
Query: 262 F-NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+D L + +E L PAE+L + PA + C +R +
Sbjct: 159 AESDTTLHNEIE----RLQPAEILHDEDWR------------PAFSRNHHCTARPTW--- 199
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
Q + + + G H + G ++P LA+ A + +++
Sbjct: 200 ----------------HFDRETAQRLLLRQFGTHDLSGFGCDHLP-LAITAAGALLNYVQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ + + + LS + L A + + LE L ++ +G TL+ +++ T T G
Sbjct: 243 ETQRTALPHINSLTVELSDE-GIILDAASRRNLE-LESSLSGEHKNTLISVIDKTATSMG 300
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLLRRW+ PL DRN + R AV T++E Y
Sbjct: 301 SRLLRRWLNKPLRDRNTLRNRHQAVG-------------------------TLLEQYRYE 335
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHIDGEYRE 557
L + L +G DI+R +RI +A P + + + + + Q+Q L D +
Sbjct: 336 DLHNTLRGIG---DIERIASRIALGSARPRDLSTLRDSLHVLPHIHAQIQPL--DNPRLQ 390
Query: 558 KVTSKTLHSALLKRLILTA--SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+ A L+ L+ +A +P V+ + D G +I++G +E
Sbjct: 391 ALLQDINPHAELRHLLDSAIIDNPPVVIR-------------DGG------VIASGFDAE 431
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAKV 673
+ R ++A + L L + + G+ L+ + +E+P + ++P ++ +
Sbjct: 432 LDELRNLSENADQYLLDLETREKARTGIDKLKVAYNRVHGYYVEVPQSQLSRIPADYIRR 491
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K R+ PE+ D++ A E +A ++ L+ + + + QA+A L
Sbjct: 492 QTLKGVERFILPELKKFEDKVLSARERSLAREKAIYEDLLRTLAEHLLPLRQSAQAIAEL 551
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A + N+ P V E I I GRHPV++ L FVPND + + R
Sbjct: 552 DVLGNFAERASTLNYNCPALV---EGSGIQIEGGRHPVVERTLDAPFVPNDLYMDSRRRM 608
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS Y+RQVALI ++A +GS+VPA +A + +D I+TR+GA D + GRS
Sbjct: 609 L-MITGPNMGGKSTYMRQVALIVLLAHIGSYVPAQTARIGNIDRIFTRIGAHDDLSTGRS 667
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL N TA SLV++DE+GRGTST DG+++A+A +YL +K LF TH
Sbjct: 668 TFMVEMTEAANILNNATAHSLVLMDEIGRGTSTFDGLSLAWAFAEYLARERKAFTLFATH 727
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKV 972
Y ++ + + + V + +D+ D + +L+ V G + S+G +V
Sbjct: 728 YFELTVLPEQISTIVNVH-------------IDAIEHGDKIVFLHAVKEGPANQSYGLQV 774
Query: 973 AQLAQLPPSCISRATVIAAKLE 994
AQLA +P I++A LE
Sbjct: 775 AQLAGVPKPVIAQARKKLVSLE 796
>gi|261822576|ref|YP_003260682.1| DNA mismatch repair protein MutS [Pectobacterium wasabiae WPP163]
gi|261606589|gb|ACX89075.1| DNA mismatch repair protein MutS [Pectobacterium wasabiae WPP163]
Length = 854
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 260/939 (27%), Positives = 408/939 (43%), Gaps = 184/939 (19%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ LK ++P++LL +G + F +DA+ A+++L I A A
Sbjct: 12 HTPMMQQYFRLKAEHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ RLV G V + +Q A GP R + + T T+
Sbjct: 72 GVPHHAVENYLARLVQMGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L + D G GF G ++IS+G E
Sbjct: 126 LLQEKQD------NLLAAIWQD------------GRGF----GYATLDISSGRFRVSEPA 163
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
D R + A L +PAELL +
Sbjct: 164 D---RETMAAELQRTNPAELLYPESF---------------------------------- 186
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI--RHLKQ 381
E M L EN G R + PD A Q L L R L
Sbjct: 187 -ESMDLIEN-----------------RHGLRRRPLWEFE--PDTARQQLNLQFGTRDLTG 226
Query: 382 FGLERIM-------CL--------GASFRSLSG-SME-----MTLSANTLQQLEVLRNNS 420
FG+E+ CL S + G +ME + + A T + LE+ +N S
Sbjct: 227 FGVEQAKLALRAAGCLLQYAKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQNLS 286
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
G E TL +++ T+T GSR+L+RW+ P D + + R A+S + E
Sbjct: 287 GGVE-NTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQAISALQE---------- 335
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAIL 540
+ P L L +G D++R + R+ RTA P + + A
Sbjct: 336 -------------ITPD----LQPYLRQVG---DLERILARLALRTARPRDLARMRHA-- 373
Query: 541 YAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG 600
QQ RE++ L + ++RL+ + IG+ +L + + +
Sbjct: 374 -----FQQF---PAIREQLAP--LEADSVRRLV------SQIGQFDELRDLLERAVVEAP 417
Query: 601 DLL--NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITH 656
+L + +I+ G +E+ R A + LD L R++LG+ L+ F V G
Sbjct: 418 PVLVRDGGVIAPGYHAELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNGVHGYYI 477
Query: 657 LIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF 716
+ + VP+++ + + K RY PE+ D++ + + + +A +D
Sbjct: 478 QVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYDELFDLL 537
Query: 717 GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL 776
+ AE Q + ALA LD L LA + N++ P+ D +P I I GRHPV++ +L
Sbjct: 538 LPHLAELQQSATALAELDVLANLAERADTLNYICPMLSD--KP-GIKITGGRHPVVEQVL 594
Query: 777 LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLD 836
+ F+ N +L +R IITGPNMGGKS Y+RQ ALI +MA +G FVPA A + +D
Sbjct: 595 REPFISNPLSLSPQRRML-IITGPNMGGKSTYMRQAALIVLMAHIGCFVPADLAVIGPVD 653
Query: 837 GIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYAT 896
I+TR+GA+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A
Sbjct: 654 RIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWAC 713
Query: 897 LDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTY 955
+ L K M LF THY ++ + K G V + +D++ D + +
Sbjct: 714 AENLANRIKAMTLFATHYFELTTLPEKMEGVVNVH-------------LDAREHGDTIAF 760
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ V G + S+G VA LA +P I RA +LE
Sbjct: 761 MHSVQDGAASKSYGLAVAALAGVPKDVIKRARQKLKELE 799
>gi|256852232|ref|ZP_05557618.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 27-2-CHN]
gi|260661736|ref|ZP_05862647.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 115-3-CHN]
gi|256615278|gb|EEU20469.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 27-2-CHN]
gi|260547483|gb|EEX23462.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 115-3-CHN]
Length = 854
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 256/945 (27%), Positives = 428/945 (45%), Gaps = 158/945 (16%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTASIPTF 148
+Q ++K++YPD L VG + F +DA A++L + N A +P
Sbjct: 3 KQYYDIKSQYPDAFLFYRVGDFYELFEDDAVKGAQILELTLTHRSNKSENPIPMAGVPHQ 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDVGG 207
++ +V LV G+KV + +Q E P +A G RG+ L T T+ +
Sbjct: 63 AVDSYVNTLVEKGYKVALCEQLE-------DPKQAKGMVKRGIIQLVTPGTM-----MNE 110
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
G +G ESNYL V G ++ D+ GE L
Sbjct: 111 GPNGAK-ESNYLTSVFSTKSGFG---------------------LAYSDLSTGEIFTTHL 148
Query: 268 RSGLEAV--LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
+S + + LLSL E++ LS + +L SN+ V +D AE
Sbjct: 149 KSFADVLNELLSLRTKEVVFEGSLSDSQKDVL-----KKSNITVSTPIQDQ----EKHAE 199
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLE 385
V + LSN ++ D +Q L + L R L +
Sbjct: 200 VSYAIQK-----LSNQAEK--DATKQ---------------LVIYLLVTQKRSLAHLQIA 237
Query: 386 RIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLR 445
+ S S + +S LE++ + G + G+L +++ T T G RLL+
Sbjct: 238 K---------SYEVSQYLQMSHVVQNNLELVASAKTGKKMGSLFWLLDKTNTAMGGRLLK 288
Query: 446 RWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSV 505
+W+ PL ++SEI EK + Y+ V
Sbjct: 289 QWLARPLL----------SISEI-----------------EKRQKIVQAMLDNYFTREGV 321
Query: 506 LTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID------GEYREKV 559
+L D++R RI +A E + + ++ L A Q+Q + + E++
Sbjct: 322 KDALKGVYDLERLTGRIAFGSANARELLQLSRS-LDAIPQIQSALFESGDEDLANFAEQI 380
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
+ + +K I+ +P ++ D G +I G ++ R
Sbjct: 381 IDLSELAKKIKDTIV--ENPPIL-------------TTDGG------LIREGINEQLDRY 419
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLN-WAKVNST 676
R A+ + K L L RK G+ NL+ + I++ KVP + + +
Sbjct: 420 RDAMNNGKTWLAQLQAQERKATGIENLKIGYNKVFGYFIQVSKGNVAKVPEGRYIRKQTL 479
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQALAALDC 735
+ RY +PE L + L L E + S L+E+ + + Q A+A+LD
Sbjct: 480 TGSERYITPE-LKEHENLILEAENKSTDLEYQIFSDLREYIKTFIPKLQELGNAIASLDA 538
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYC 794
L + AT++ N+ RP F D + +I + +GRHPV++ +L D +++PND + A+
Sbjct: 539 LTSFATVAEENNYCRPSFHQDSQ--EIKVVAGRHPVVEKVLADGSYIPNDIQM-ADDTSV 595
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNM GKS Y+RQ+ALI +MAQVGSFVPA+ A L + D I+TR+GA+D + G+ST
Sbjct: 596 FLITGPNMSGKSTYMRQMALIAVMAQVGSFVPATEAALPIFDQIFTRIGAADDLISGQST 655
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E++EA+ L+N T +SLV+ DE+GRGT+T+DG+A+A A + YL + LF THY
Sbjct: 656 FMVEMSEANEALQNATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKTLFATHY 715
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ D++ K + HV ++ + ++ +L+K++PG ++ S+G VAQ
Sbjct: 716 HELTDME-KTLDHLKNIHVGA-----------TQENGNLIFLHKILPGPADQSYGIHVAQ 763
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQ 1019
LA LP + A+ + +LEA+ ++ ++ S + DL + +D E+
Sbjct: 764 LAGLPNKVLREASKMLKRLEAQGANGLEPASLQLDLFNEKNDSEE 808
>gi|254507361|ref|ZP_05119496.1| DNA mismatch repair protein MutS [Vibrio parahaemolyticus 16]
gi|219549617|gb|EED26607.1| DNA mismatch repair protein MutS [Vibrio parahaemolyticus 16]
Length = 859
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/597 (30%), Positives = 308/597 (51%), Gaps = 73/597 (12%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ +N + G++ TL +++HT T GSR+L+RW+ P+ D + ++ RLDA
Sbjct: 271 LDAATRRNLEITQNLAGGTD-NTLAEVLDHTATAMGSRMLKRWLHQPMRDIDTLNHRLDA 329
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
++E+ + + L VL +G DI+R + R+
Sbjct: 330 IAELKDEA-------------------------LFSDLHPVLKQIG---DIERILARLAL 361
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
R+A P + M + YA +QL E E ++S LH L +L A A +G+
Sbjct: 362 RSARPRD----MARLRYAMQQLP------EVSELMSS--LHHPYLSKL---AQYAAPMGE 406
Query: 585 AAKLLSTVNKEAA-----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRK 639
+LL KE D G +I+ G +E+ RK A E L+ + R+
Sbjct: 407 VCELLERAIKENPPVVIRDGG------VIAEGYNAELDEWRKLADGATEYLEQMEQDERE 460
Query: 640 QLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
+ G+ +L+ + +V G + + VP ++ + + K RY PE+ D++ +
Sbjct: 461 RHGIDSLKVGYNNVHGFFIQVSRGQSHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNS 520
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
+ + + W+ + + Q A++ +D L LA + + ++ RP + +
Sbjct: 521 KSKALALEKQLWEELFDLLLPHLEQMQNVASAVSQIDVLQNLAERADSLDYCRPNLIKE- 579
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
IHI +GRHPV++ ++ + F+ N L+A+R+ IITGPNMGGKS Y+RQ ALI +
Sbjct: 580 --AGIHIQAGRHPVVEQVMDEPFIANPIELNAQRKML-IITGPNMGGKSTYMRQTALIAL 636
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MA +GS+VPA SA + +D I+TR+GASD + GRSTF+ E+ E + IL N T SLV++
Sbjct: 637 MAHIGSYVPAESATIGSVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATQNSLVLM 696
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
DE+GRGTST+DG+++A+A+ ++L + M LF THY ++ ++ ++ ++ H+ +
Sbjct: 697 DEIGRGTSTYDGLSLAWASAEWLAKQLGSMTLFATHYFELTELPSQIP-TLANVHLDAV- 754
Query: 938 SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ + +++ V G + S+G VA LA +P S I A +LE
Sbjct: 755 ----------EHGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKSVIKNARAKLTQLE 801
Score = 47.0 bits (110), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K+TP+ QQ ++LK + PD+LL +G + F +DA+ A+++L I A
Sbjct: 10 QKHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIP 69
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
A +P + ++ +LV G V + +Q A GP R + + T T+
Sbjct: 70 MAGVPFHAVEGYLAKLVQLGESVAICEQIGDPAT------SKGPVERAVVRIVTPGTV 121
>gi|189502159|ref|YP_001957876.1| DNA mismatch repair protein MutS [Candidatus Amoebophilus asiaticus
5a2]
gi|189497600|gb|ACE06147.1| hypothetical protein Aasi_0767 [Candidatus Amoebophilus asiaticus
5a2]
Length = 863
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 252/939 (26%), Positives = 429/939 (45%), Gaps = 149/939 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASI 145
N+ TPL +Q E+K KYP LL+ VG + FGEDA +K+L I N A++
Sbjct: 2 NQATTPLMKQYNEIKAKYPGSLLLFRVGDFYETFGEDAVKTSKLLDIVLTKRANGAAAAV 61
Query: 146 -----PTFRLNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGPFGRGLSAL------ 193
P L+ ++ +LV AG +V + Q E A+K G RG++ L
Sbjct: 62 ELAGFPHHALDTYLPKLVKAGHRVAICDQLEDPKAVK-------GIVKRGVTELVTPGLS 114
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRL-GVVAVEI 252
+ A LE + NYL + F+ L G+ +++
Sbjct: 115 FHDAVLERRHN------------NYLASLY-----------------FEKELVGIAFLDV 145
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
STG+ + + ++ + ++ PAE+++ SK+ A+ S
Sbjct: 146 STGEFLTAQGKATYI----DKLMQGFQPAEVII----SKKQRATFQAF----SKENYPSY 193
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
+ + ++ A+ L E+ G ++ GI N+P L V A
Sbjct: 194 ALEDWVYQPDYAQ-EKLNEHFGTASIKGF------------------GIDNLP-LGVIAS 233
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+R+L++ + + S + + L T++ LE+L+ G +L+ ++
Sbjct: 234 GAILRYLEETEHKEKKHI-TSIARIEEDKYVWLDKFTIRNLEILQPQQEGG--VSLIEVL 290
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+ T+T G+RL+++W+ PL D I RLD V + +
Sbjct: 291 DKTVTPMGARLMKKWLVLPLKDIQAIQRRLDIVDLFYQDTNLW----------------- 333
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
S+L L + D++R I+++ ATP + +A+ +A+ + L I
Sbjct: 334 ----------GSILQELKQISDLERLISKVSVGRATPRDLLALQKALQHT------LPIQ 377
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+ TS+ H L+K + + K L + QGDL I G
Sbjct: 378 NYLQ---TSE--HDLLIKLSQQLHNCEYLADKIRGTLQDNPPLSLTQGDL-----IREGI 427
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA--NFKVPLNW 670
SE+ RK K+ L L K G+ +L+ + +E+ KVP +W
Sbjct: 428 DSELDELRKIAYQGKDYLLQLQQKEIKNTGINSLKIAYNKVFGYYLEVTNVHKSKVPASW 487
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + RY + E+ T +++ A ++ + + + L + + + L
Sbjct: 488 IRKQTLVNAERYVTEELKTYEEKILQAESKMLEIEQRLYQQLLDSALEFVPQILQNAKIL 547
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LD-NFVPNDTNLH 788
A +DC A +R + +P+ + +I I +GRHPV++ L +D ++VPND L
Sbjct: 548 AQIDCYLTFAQEARKHQYTKPILANHK---KIIIKNGRHPVIEQQLSVDVSYVPNDIYLD 604
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E + +ITGPNM GKS +RQVALI +MAQ+GSFVPAS AE+ ++D I+TR+GASD++
Sbjct: 605 NETQQVIVITGPNMAGKSALLRQVALIVLMAQIGSFVPASQAEIGLVDKIFTRVGASDNL 664
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KC 906
G STF+ E+ E + I+ N + +SL+++DE+GRGTST+DG++IA++ ++YL H K
Sbjct: 665 ALGESTFMVEMTETASIMHNLSDRSLIVMDEIGRGTSTYDGISIAWSIIEYLHNHPKYKA 724
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ + + V ++V+ +V G + +L K+ G SE
Sbjct: 725 KTLFATHYHELNQLSDQLE-RVKNFNVAV---KEVAGK--------IIFLRKLREGGSEH 772
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRS 1005
SFG VAQLA +P + RA+ I LE + ++N++
Sbjct: 773 SFGIHVAQLAGMPTQVVERASEILGHLEHD-KKHIENKA 810
>gi|365892856|ref|ZP_09431091.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. STM 3809]
gi|365331005|emb|CCE03622.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. STM 3809]
Length = 914
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 264/962 (27%), Positives = 435/962 (45%), Gaps = 165/962 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K TP+ +Q +++K +P ++L +G + F EDAE+A+K LGI H +
Sbjct: 27 KLTPMMEQYLDIKAAHPGLMLFYRMGDFYELFFEDAEVASKALGIVLTKRGKHQGQDIPM 86
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+P R ++ RL+ G +V V +Q E A A G RG+ + T TL
Sbjct: 87 CGVPVERSEDYLHRLIAQGIRVAVCEQMEDPA-AARARGNKSVVKRGVVRVVTPGTLT-- 143
Query: 203 EDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
ED +NYL+ + G+ G GD RLG+ ++IST D +
Sbjct: 144 ------EDNLLDARANNYLLSIARSRGSSG-------GD----RLGLAWIDISTSDFIVT 186
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPL-SKQT-EKMLLAYAGPASNVRVECASRDCFI 318
E F + L A L ++P E+++ L S +T E +L A V +RD F
Sbjct: 187 EC--AF--AELTATLARINPNEVIVSDALYSDETFEPVLRELAA------VTPLTRDVFD 236
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
G A + + + ++G+ + L A A + +
Sbjct: 237 GATAERRLCDYFAV-----------------------ATMDGLAVLSRLEATAAAACVTY 273
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
+++ + + L R +GS M + T LE+ R + G G+LL ++ T+T
Sbjct: 274 VERTQVGQRPPLAPPAREATGST-MAIDPATRANLELTRTLT-GERRGSLLDAIDCTVTS 331
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
GSRLL + + PL + I RLDAV+ ++S + D
Sbjct: 332 AGSRLLAQRLAAPLTEPAQIGRRLDAVTVF--------VADSAARED------------- 370
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
+ L +PD+ R + R+ P + A+ IL A + L +L + + ++
Sbjct: 371 ------IRAILRGAPDMTRAMARLSVGRGGPRDLAALRDGILAADQALARLSVLDQPPQE 424
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVAR 618
V A++ A+ + E A D +I +G F
Sbjct: 425 VA-------------------AIMSALARPARALADEFARALDEQLPLIKRDGGF----- 460
Query: 619 ARKAVQSAKEELDSLINMCR-----------KQLGMRNLEFMSVSGITHLIELPANFKVP 667
R + +E +L + R Q G++ L+ + + + +E+ A
Sbjct: 461 VRSGYDATLDETRNLRDASRLVVASMQARYADQTGVKALKIRHNNVLGYFVEVTAQHGDK 520
Query: 668 LNWAKVNST---KKT----IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
L A +N+T ++T +R+ + E+ ++A A E + +D +
Sbjct: 521 LMSAPLNATFIHRQTLAGQVRFTTSELGEIEAKIANAGERALNLELEIFDRLCAQALAIG 580
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN- 779
+ +AA A LD ALA L+ + N+VRP VD + I GRHPV++ L
Sbjct: 581 DDLRAAAHGFAMLDVATALAKLAVDDNYVRPE-VDGS--LGFAIEGGRHPVVEQSLKREG 637
Query: 780 --FVPNDTNLHAEREY----CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
F+ N +L + ++TGPNM GKS ++RQ ALI ++AQ+GSFVPAS A +
Sbjct: 638 QPFIANSCDLSPTPGHKSGQLWLLTGPNMAGKSTFLRQNALIALLAQIGSFVPASRARIG 697
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
++D +++R+GA+D + +GRSTF+ E+ E + IL ++LVI+DE+GRGT+T DG++IA
Sbjct: 698 IVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGERALVILDEIGRGTATFDGLSIA 757
Query: 894 YATLDYLLEHKKCMVLFVTHYPKIADIKTK----FTGSVGTYHVSYLTSHKVMGPMDSKS 949
+A +++L E +C LF THY ++ + K F +V +
Sbjct: 758 WAAIEHLHESNRCRTLFATHYHELTALAAKLPRLFNATVRV----------------KEW 801
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRD 1009
DV +L++V+PG ++ S+G +VA+LA LPP+ ISRA + AKLEA + R QN A D
Sbjct: 802 QGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVISRAKSVLAKLEA--ADRGQNARALVD 859
Query: 1010 LL 1011
L
Sbjct: 860 DL 861
>gi|256078665|ref|XP_002575615.1| hypothetical protein [Schistosoma mansoni]
gi|360043417|emb|CCD78830.1| hypothetical protein Smp_042670.2 [Schistosoma mansoni]
Length = 1116
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 276/1050 (26%), Positives = 446/1050 (42%), Gaps = 156/1050 (14%)
Query: 48 PAKRKVVSSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVL 107
P+K K ++ + P P+ HTL P T K TP +Q ELK++Y DV+
Sbjct: 97 PSKIKDING----RRPDHPEYDSHTLY---VPEEFKT---KQTPGMRQWWELKSRYTDVI 146
Query: 108 LMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVV 167
L +VG + + DA + K LG+ + +F P +LV G+KV +
Sbjct: 147 LFFKVGKFYEMYHMDAMIGVKELGL-VFMKGSFAHCGFPEVAFPRMADQLVRKGYKVARI 205
Query: 168 KQTETA-AIKAHGPGKAGP---FGRGLSALYTKATLEAA-EDVGGGEDGCGGESNYLVCV 222
+QTE+ A+ K+ R + + T T A+ D+ ++L+ V
Sbjct: 206 EQTESIDAMNERCKRKSSSEKVVRREVCQIITPGTCTASTRDLIN----LAHPDSFLLAV 261
Query: 223 VDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAE 282
V+ G+ + G+ + STG + G+F D S L L P +
Sbjct: 262 VESHGD----------KSYPFAFGIGLLNASTGKINIGQFLDDRHCSRLRTFLSHYPPNQ 311
Query: 283 LLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMS--LYENMGEDTL-- 338
LL+ + + K L+ + ++ + + E+ + + +T
Sbjct: 312 LLIERGTAGSAIKSLIKTSLSCVPTEFLTPTKQFWSAKNTVQELETADYFPKQTSNTTVD 371
Query: 339 SNNEDQNMDVPEQGNHRSAIEGIMNMPD-----------LAVQALALTIRHLKQFGLER- 386
SN+ + P++ N + +++ D LA + L I +L+ ++R
Sbjct: 372 SNHVSKVSSFPDKENWPDVLLNMLSEDDPLGRTVKSEWELAFRCLGALIYYLRYCLIDRE 431
Query: 387 IMCLG------------ASFRSLSGSME--------MTLSANTLQQLEVLRNNSNGSEYG 426
++ LG A+ + GS+E M L TL L+++RNN +GS+ G
Sbjct: 432 VLSLGFIDVYVPIDMKNANSQRSPGSIELFYDTQSQMVLDNITLSNLDIIRNNVDGSQEG 491
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+LL +N T +G RLLR+W+T P C+ N+I R A+ +
Sbjct: 492 SLLQRLNTCCTFFGRRLLRQWITAPPCNPNVIRQRQLAIENL------------------ 533
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT------PSEFIAVMQAIL 540
++I + I+ + L + PD++R IT+I H + P + + +
Sbjct: 534 ----ISISD-----IIPKLREKLAQLPDLERLITKI-HLLGSKGDKNHPDSRAIIFEEVQ 583
Query: 541 YAGKQLQQL--HIDG-EYREKVTSKTLH----SALLKRLI----LTASSPAVIGKAAKLL 589
Y+ K + +DG E K+ + H SA LK+L+ L + P + K
Sbjct: 584 YSRKNIIDFVATLDGFELSYKIIHEINHYPLSSAYLKKLVTLTNLGGNFPDITEKINYFK 643
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ + E A + + G E + ++ E++D + K G R L +
Sbjct: 644 NAFDAEKAKRE---GRITPEPGIDPEYDESLSEIKRIVEDMDRFLLKWSKTFGTR-LAYW 699
Query: 650 SVSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRA 707
+ IE+P + +VP +W + K RY E L +L A E R+
Sbjct: 700 GTGRNRYQIEIPESLASRVPNSWQLSSQRKGVKRYTCSETQEWLSELTAAEERKDASLRS 759
Query: 708 AWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVR--PVFVD---DHEPVQI 762
F + + A+ LA LDC+ AL S N + V P F+D EP+ +
Sbjct: 760 IMQHIFSSFSESFTHWHMAMSCLAELDCIIALYLYSTNASDVMCLPEFIDLNSSTEPL-L 818
Query: 763 HICSGRHPVL-DTILLDNFVPNDTNLHAEREYCQ------------------IITGPNMG 803
I G HP L +T + + ND L ++TGPNMG
Sbjct: 819 EIVDGIHPCLINTFSGGDIISNDIKLGTTSSMINSPTQHHTLHDMFNNASVILVTGPNMG 878
Query: 804 GKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEAS 863
GKS +RQ AL+ I+A +G +PA S +L +D I++R+GASD + G STFL EL+E +
Sbjct: 879 GKSTLMRQAALLVILAHLGCRIPAKSCKLTPVDRIFSRLGASDRMLSGESTFLVELSETA 938
Query: 864 YILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL-------LEHKKCMVLFVTHYPK 916
IL + T SLV++DELGRGTSTHDG A+A A + YL LF THY
Sbjct: 939 SILHHITPHSLVLMDELGRGTSTHDGSALAGAVVSYLAKPNGRFFNGSGPRTLFSTHYHS 998
Query: 917 IADI---KTKFTGSVGTYHVSYLTSH-KVMGPMDSKSD---QDVTYLYKVVPGVSESSFG 969
+ D K + T H+ H M +S+S +++T+LYK +PG S+G
Sbjct: 999 LVDQVANKDRSTSDEDINHLCIGLGHMACMVEAESESTNGLENITFLYKFIPGACPKSYG 1058
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
F A+LA LP I A + E ++
Sbjct: 1059 FNAARLAMLPDKVIRLGLAKAKEFEKTTAT 1088
>gi|421618424|ref|ZP_16059400.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri KOS6]
gi|409779516|gb|EKN59172.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri KOS6]
Length = 859
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 270/940 (28%), Positives = 418/940 (44%), Gaps = 183/940 (19%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
++TP+ QQ LK ++PD L+ +G + F +DA+ AA +L I +IP
Sbjct: 10 QHTPMMQQYWRLKREHPDQLMFYRMGDFYELFYDDAKKAAALLDITLTARGQSAGTAIPM 69
Query: 148 FRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+ H + RLV G V + +Q A GP R + + T T+
Sbjct: 70 AGIPFHSAEGYLARLVKLGESVVICEQIGDPATSK------GPVERQVVRIITPGTVSDE 123
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D N L VV D+ +FG +S D+ G F
Sbjct: 124 ALLDERRD------NLLAAVVGDEK--------LFG-------------LSVLDIASGRF 156
Query: 263 NDGFLRSG--LEAVLLSLSPAELLL------GQPLSKQTEKMLLAYAGPASNVRVECA-- 312
L+ L A L LSPAELL+ G PL K+ VR
Sbjct: 157 TVQELKGWETLLAELERLSPAELLIPDDWPQGLPLEKR------------RGVRRRAPWD 204
Query: 313 -SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
RD + SL + L +N+ + AI + A +
Sbjct: 205 FDRD--------SAFKSLCQQFATQDLKGFGCENLTL--------AIGAAGCLLSYAKET 248
Query: 372 LALTIRHLKQFGLER----IMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
+ HL+ ER ++ GAS R+L +L+V N +G T
Sbjct: 249 QRTALPHLRSLRHERLDDTVILDGASRRNL--------------ELDV---NLSGGRENT 291
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
L +M+ T GSRLL RW+ PL +R ++ AR D+++ + E
Sbjct: 292 LQSVMDRCQTAMGSRLLTRWLNRPLRNREVLEARQDSITCLLE----------------- 334
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
YY + L D++R + RI R A P + +A ++ L A QLQ
Sbjct: 335 -----------YYRFEQLQPQLKDIGDLERILARIGLRNARPRD-LARLRDALAALPQLQ 382
Query: 548 ---------QLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAAD 598
LH E + +++ + LL R I+ + PAVI L + + E
Sbjct: 383 AGMQDLVAPHLH---ELAKSISTYPELAELLARAIID-NPPAVIRDGGVLKTGYDAEL-- 436
Query: 599 QGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITH 656
D L + + GQ+ AR+ ++ G+ NL+ + V G +
Sbjct: 437 --DELQSLSENAGQYLMDLEAREKART----------------GLANLKVGYNRVHG--Y 476
Query: 657 LIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK 714
IELP+ P ++ + + K R+ +PE+ D+ A + +D L+
Sbjct: 477 FIELPSKQAESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKLLYDELLE 536
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
G+ A Q + ALA LD L LA + N + RP FV+ +P +HI GRHPV++
Sbjct: 537 MLIGHLAPLQESASALAELDVLSNLAERALNLDLNRPRFVE--QPC-MHIEQGRHPVVEQ 593
Query: 775 ILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHV 834
+L FV ND L + +ITGPNMGGKS Y+RQ ALI ++AQ+GSFVPA++ EL +
Sbjct: 594 VLETPFVANDLGLD-DATRMLVITGPNMGGKSTYMRQTALIVLLAQIGSFVPAAACELSL 652
Query: 835 LDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAY 894
+D I+TR+G+SD + GRSTF+ E++E + IL N + +SLV++DE+GRGTST DG+++A+
Sbjct: 653 VDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNASDRSLVLMDEVGRGTSTFDGLSLAW 712
Query: 895 ATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVT 954
A ++L + + LF THY ++ + + V H+S T H ++ +
Sbjct: 713 AAAEHLAK-LRAFTLFATHYFELT-VLPESEPVVANVHLSA-TEH----------NERIV 759
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+L+ V+PG + S+G VAQLA +P I RA ++LE
Sbjct: 760 FLHHVLPGPASQSYGLAVAQLAGVPGEVIQRARDHLSRLE 799
>gi|333376322|ref|ZP_08468107.1| DNA mismatch repair protein MutS [Kingella kingae ATCC 23330]
gi|332968320|gb|EGK07391.1| DNA mismatch repair protein MutS [Kingella kingae ATCC 23330]
Length = 850
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 307/602 (50%), Gaps = 73/602 (12%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
+ L A T + LE+ S G + TL + + +T GSRLL W+ HPL +R+ + ARL
Sbjct: 263 IALDAATRRNLEITATLS-GKKSPTLFSVFDKCVTHMGSRLLAHWLHHPLRNRDYVQARL 321
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV+ ++ QH+ + + SL DI+R RI
Sbjct: 322 DAVA-------------ALLQHN----------------FADISNSLKNMADIERIAARI 352
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
TA P + A+ A+L Q+Q T K S+LL L A PAV
Sbjct: 353 ALGTARPRDLSALRDALL----QVQ------------TIKLPPSSLLD--TLAACFPAVR 394
Query: 583 GKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRK--Q 640
A L + + E + L + +I++ +++ R + L L N R+ Q
Sbjct: 395 DTATLLQAALLPEPSVW--LKDGNVINDNYHADLDELRHLQTHGGDFLRDLENRERERTQ 452
Query: 641 LGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALAN 698
L +EF V G IEL N P ++ + + K R+ +PE+ D+ A
Sbjct: 453 LSTLKVEFNRVHGF--YIELSKNQAELAPSDYQRRQTLKNAERFITPELKAFEDKFLQAQ 510
Query: 699 EELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHE 758
E + + ++ + A+ Q +A+A LD L + A ++ ++++ P F E
Sbjct: 511 ERALALEKTLFEQLISSLQTQLAQIQQTAKAVATLDVLCSFAHTAQTQHYIMPQF---SE 567
Query: 759 PVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIM 818
+IHI +GRHPV++ + F PN+T L+ + C ++TGPNMGGKS Y+RQVALI ++
Sbjct: 568 QAEIHIHNGRHPVVEQ-QVTRFTPNNTALNTAQRLC-LLTGPNMGGKSTYMRQVALIALL 625
Query: 819 AQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVD 878
A GSFVPA A + +D I+TR+GASD + RSTF+ E++E +YIL + TAQSLV++D
Sbjct: 626 AHTGSFVPAEHALIGKIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATAQSLVLMD 685
Query: 879 ELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS 938
E+GRGTST DG+A+A+A ++LL+H + + LF THY ++ + +G+ H+S L
Sbjct: 686 EVGRGTSTFDGLALAHAIAEHLLQHNQSLSLFATHYFELTRLPEHQSGAFNQ-HLSAL-- 742
Query: 939 HKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
+ QD+ +L+++ G +E S+G VA+LA LPP + A LE + +
Sbjct: 743 ---------EQGQDIVFLHQIQDGAAEKSYGIAVAKLAGLPPIALKSARRHLRDLEVQAA 793
Query: 999 SR 1000
R
Sbjct: 794 DR 795
>gi|336432331|ref|ZP_08612166.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
2_1_58FAA]
gi|336018668|gb|EGN48405.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
2_1_58FAA]
Length = 883
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 319/617 (51%), Gaps = 76/617 (12%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
M L ++T + LE+ + G+LL +++ T T G+R+LR++V PL ++ I RL
Sbjct: 267 MMLDSSTRRNLELCETLREKQKRGSLLWVLDKTKTAMGARMLRKYVEQPLIEKKEILRRL 326
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV E+ E I + LS V D++R +T++
Sbjct: 327 DAVEELKEQ--------------------AICREEIREYLSPVY-------DLERLVTKV 359
Query: 523 FHRTATPSEFIA------VMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTA 576
+ +A P + A ++ I + L+ ++ E +E++ SAL+K I A
Sbjct: 360 TYGSANPRDLTAFGSSLTMLPPICCIMEDLRAPLLE-EIKEELDPLEDISALIKEAI--A 416
Query: 577 SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
P + K II +G EV R+A K+ L L +
Sbjct: 417 EEPPLAMKEGG-------------------IIRDGYSEEVDTLRRAKSEGKDWLAKLESE 457
Query: 637 CRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
R++ G++NL+ + +E+ +FK VP + + + RY PE+ D +
Sbjct: 458 EREKTGIKNLKIKYNKVFGYYLEVTNSFKDMVPDYYTRKQTLANAERYIIPELKELEDTI 517
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
A ++L + + + Q +A+A +D +LA ++ N+VRP
Sbjct: 518 LGAEDKLYALEYEIYCDVRNQIAAQVERIQTTAKAIAKVDVFASLALVAERSNYVRPKI- 576
Query: 755 DDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
+E I I GRHPV++ ++ D F+ NDT L +++ IITGPNM GKS Y+RQ A
Sbjct: 577 --NEQGVIDIKDGRHPVVEKMIPNDMFISNDTYLDDKKQRISIITGPNMAGKSTYMRQAA 634
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
LI +MAQ+GSFVPASSA + ++D I+TR+GASD + G+STF+ E+ E + ILRN T++S
Sbjct: 635 LIVLMAQLGSFVPASSANIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKS 694
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTY 931
L+I+DE+GRGTST DG++IA+A ++Y+ ++K LF THY ++ +++ K +V Y
Sbjct: 695 LLILDEIGRGTSTFDGLSIAWAVVEYISDNKLLGAKTLFATHYHELTELEGKI-HNVNNY 753
Query: 932 HVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAA 991
++ + K D D+ +L K+V G ++ S+G +VA+LA +P I+RA I
Sbjct: 754 CIA----------VKEKGD-DIVFLRKIVKGGADKSYGIQVAKLAGVPDVVITRAKEIVE 802
Query: 992 KLEAE-VSSRVQNRSAK 1007
+L E +++RV +++
Sbjct: 803 ELSDEDITTRVSEIASR 819
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ QQ +E K +Y D +L +G + F EDA A++ L G +
Sbjct: 5 TPMMQQYIETKKQYQDCILFYRLGDFYEMFFEDALTASRELEITLTGKNCGQEEKAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTE 171
+P + ++ +LV+ G+KV + +Q E
Sbjct: 65 VPYHAVEGYLNKLVSKGYKVAICEQVE 91
>gi|312873745|ref|ZP_07733790.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2052A-d]
gi|311090743|gb|EFQ49142.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2052A-d]
Length = 854
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 246/952 (25%), Positives = 434/952 (45%), Gaps = 151/952 (15%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + + G+ G+ ++STG
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSN------------SQGW----GLTYCDLSTG----- 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI-- 318
E+ L+ E+++ + LS QT +++ + + F+
Sbjct: 149 -----------ESYATHLTSWEMIVNELLSLQTRELVYG--------ETLTSDKQIFLKK 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
G L++ + L + E + V +Q +++ I + + ++ H
Sbjct: 190 AGITLSQPVKLSKEHAEVSY---------VTQQLHNQLEIAATKQLLAYLLATQKRSLAH 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L+ +S + + +S LE++++ G + G+L +++ T T
Sbjct: 241 LQ------------VTQSYEPNQYLQMSHIVQTNLELIKSAKTGKKMGSLFWLLDKTSTA 288
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL+ W+ PL + I +R V+ + + Y + E + +H Q
Sbjct: 289 MGGRLLKSWIERPLISLSEIKSRQLVVTALFDD---YFSREKIIKH-----------LQG 334
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
Y L + + R + ++ A E I ++ A + + L+ + +K
Sbjct: 335 VYDLERLTGRVALGSANARELLQLADSLAVVPEIINIL-----ANSKNEVLN---NFAQK 386
Query: 559 VTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
+ K +H ++K ++ +P LST KE II +G S++
Sbjct: 387 IDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKSGVSSQLD 424
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN-WAKVN 674
R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+ + +
Sbjct: 425 RYRDAMMNGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKDKVPLDRYMRKQ 484
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ + A + T + + + ++ Y Q + L++LD
Sbjct: 485 TLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQLSSLD 544
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREY 793
L + LS N+V P F D I+I +GRHPV++ ++ D ++PND + E+
Sbjct: 545 VLATFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD-EQTN 601
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D + G+S
Sbjct: 602 IFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFDKIFTRIGAGDDLISGKS 661
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E++EA+ L+N T +SL++ DE+GRGT+T+DG+A+A A + YL + LF TH
Sbjct: 662 TFMVEMSEANTALKNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKTLFATH 721
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ D+ + + HV ++ + + +L+K++PG ++ S+G VA
Sbjct: 722 YHELTDLDQEL-AHLKNIHVGA-----------TQENGHLIFLHKILPGAADQSYGIHVA 769
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
QLA LP + AT + +LE ++ + DL K+SD+EQ+
Sbjct: 770 QLAGLPTKVLREATHMLKQLEKHSDNQAAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|349612127|ref|ZP_08891354.1| DNA mismatch repair protein mutS [Lactobacillus sp. 7_1_47FAA]
gi|348609143|gb|EGY59104.1| DNA mismatch repair protein mutS [Lactobacillus sp. 7_1_47FAA]
Length = 854
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 242/957 (25%), Positives = 431/957 (45%), Gaps = 161/957 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + + G+ G+ ++STG
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSN------------SQGW----GLTYCDLSTG----- 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI-- 318
E+ L+ E+++ + LS QT +++ + + F+
Sbjct: 149 -----------ESYATHLTSWEMIVNELLSLQTRELVYG--------ETLTSDKQIFLKK 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
G L++ + L + E + V +Q +++ I + + ++ H
Sbjct: 190 AGITLSQPVKLSKEHAEISY---------VTQQLHNQLEIAATKQLLAYLLATQKRSLAH 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L+ +S + + +S LE++++ G + G+L +++ T T
Sbjct: 241 LQ------------VTQSYEPNQYLQMSHIVQTNLELIKSAKTGKKMGSLFWLLDKTSTA 288
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL+ W+ PL + I +R V+ + +
Sbjct: 289 MGGRLLKSWIERPLISLSEIKSRQLVVTALFDD--------------------------- 321
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDG 553
Y+ ++ L D++R R+ +A E + + ++ + + L +
Sbjct: 322 YFSREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLN 381
Query: 554 EYREKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+ +K+ K +H ++K ++ +P LST KE II +G
Sbjct: 382 NFAQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKSGV 419
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN- 669
S++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+
Sbjct: 420 SSQLDRYRDAMMNGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKDKVPLDR 479
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY + E+ + A + T + + + ++ Y Q +
Sbjct: 480 YMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQ 539
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
L++LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND +
Sbjct: 540 LSSLDVLATFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD 597
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 598 -EQTNIFLITGPNMSGKSTYMRQLALIIIMAQMGCFIPADSAVLPIFDKIFTRIGAGDDL 656
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
G+STF+ E++EA+ L+N T +SL++ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 ISGKSTFMVEMSEANIALKNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKT 716
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ D+ + + HV ++ + + +L+K++PG ++ S+
Sbjct: 717 LFATHYHELTDLDQEL-AHLKNIHVGA-----------TQENGHLIFLHKILPGAADQSY 764
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
G VAQLA LP + AT + +LE ++ + DL K+SD+EQ+
Sbjct: 765 GIHVAQLAGLPTKVLREATHMLKQLEKHSDNQAAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|315653064|ref|ZP_07905992.1| DNA mismatch repair protein HexA [Lactobacillus iners ATCC 55195]
gi|315489599|gb|EFU79233.1| DNA mismatch repair protein HexA [Lactobacillus iners ATCC 55195]
Length = 854
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 242/957 (25%), Positives = 430/957 (44%), Gaps = 161/957 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + + G+ G+ ++STG
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSN------------SQGW----GLTYCDLSTG----- 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI-- 318
E+ L+ E+++ + LS QT +++ + + F+
Sbjct: 149 -----------ESYATHLTSWEMIVNELLSLQTRELVYG--------ETLTSDKQIFLKK 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
G L++ + L + E + V +Q +++ I + + ++ H
Sbjct: 190 AGITLSQPVKLSKEHAEVSY---------VTQQLHNQLEIAATKQLLAYLLATQKRSLAH 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L+ +S + + +S LE++++ G + G+L +++ T T
Sbjct: 241 LQ------------VTQSYEPNQYLQMSHIVQTNLELIKSAKTGKKMGSLFWLLDKTSTA 288
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL+ W+ PL + I +R V+ + +
Sbjct: 289 MGGRLLKSWIERPLISLSEIKSRQLVVTALFDD--------------------------- 321
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDG 553
Y+ ++ L D++R R+ +A E + + ++ + + L +
Sbjct: 322 YFSREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLN 381
Query: 554 EYREKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+ +K+ K +H ++K ++ +P LST KE II +G
Sbjct: 382 NFAQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKSGV 419
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN- 669
S++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+
Sbjct: 420 SSQLDRYRDAMMNGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKDKVPLDR 479
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY + E+ + A + T + + + ++ Y Q +
Sbjct: 480 YMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQ 539
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
L++LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND +
Sbjct: 540 LSSLDVLSTFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD 597
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 598 -EQTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFDKIFTRIGAGDDL 656
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
G+STF+ E++EA+ L N T +SL++ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 ISGKSTFMVEMSEANIALNNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKT 716
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ D+ + + HV ++ + + +L+K++PG ++ S+
Sbjct: 717 LFATHYHELTDLDQEL-AHLKNIHVGA-----------TQENGHLIFLHKILPGAADQSY 764
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
G VAQLA LP + AT + +LE ++ + DL K+SD+EQ+
Sbjct: 765 GIHVAQLAGLPTKVLREATHMLKQLEKHSDNQAAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|309807428|ref|ZP_07701391.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV 01V1-a]
gi|308169350|gb|EFO71405.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV 01V1-a]
Length = 854
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 247/955 (25%), Positives = 429/955 (44%), Gaps = 157/955 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + G+ G+ ++STG+
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSS------------SQGW----GLTYCDLSTGESYAT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ + LLSL EL+ G+ L+ +++ L AG + V+ +
Sbjct: 154 HLTSWEM---IVNELLSLQTRELVYGETLTSD-KQIFLKKAGITLSQPVKLS-------- 201
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
G AEV V +Q +++ I + + ++ HL+
Sbjct: 202 GEHAEVSY-------------------VTQQLHNQLEIAATKQLLAYLLATQKRSLAHLQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+S + + +S LE++++ G + G+L +++ T T G
Sbjct: 243 ------------VTQSYEPNQYLQMSHIVQTNLELIKSAKTGKKMGSLFWLLDKTSTAMG 290
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL+ W+ PL + I +R V+ + + Y+
Sbjct: 291 GRLLKSWIERPLISLSEIKSRQLVVTALFDD---------------------------YF 323
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDGEY 555
++ L D++R R+ +A E + + ++ + + L + +
Sbjct: 324 SREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLNNF 383
Query: 556 REKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+K+ K +H ++K ++ +P LST KE II G S
Sbjct: 384 AQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKAGVSS 421
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN-WA 671
++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+ +
Sbjct: 422 QLDRYRDAMMNGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKDKVPLDRYM 481
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY + E+ + A + T + + + ++ Y Q + L+
Sbjct: 482 RKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQLS 541
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAE 790
+LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND + E
Sbjct: 542 SLDVLATFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD-E 598
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 599 QTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFDKIFTRIGAGDDLIS 658
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ E++EA+ L+N T +SL++ DE+GRGT+T+DG+A+A A + YL + LF
Sbjct: 659 GKSTFMVEMSEANTALKNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKTLF 718
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ D+ + + HV ++ + + +L+K++PG ++ S+G
Sbjct: 719 ATHYHELTDLDQEL-AHLKNIHVG-----------ATQENGHLIFLHKILPGAADQSYGI 766
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
VAQLA LP + AT + +LE ++V + DL K+SD+EQ+
Sbjct: 767 HVAQLAGLPTKVLREATHMLKQLEKNSDNQVAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|325913769|ref|ZP_08176130.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 60-B]
gi|325476969|gb|EGC80120.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 60-B]
Length = 854
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 247/955 (25%), Positives = 428/955 (44%), Gaps = 157/955 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + G+ G+ ++STG+
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSS------------SQGW----GLTYCDLSTGESYAT 153
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
+ + LLSL EL+ G+ L+ E++ L AG + V+ +
Sbjct: 154 HLTSWEM---IVNELLSLQTRELVYGETLTSD-EQIFLKKAGITLSQPVKLS-------- 201
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
G AEV V +Q +++ I + + ++ HL+
Sbjct: 202 GEHAEVSY-------------------VTQQLHNQLEIAATKQLLAYLLATQKRSLAHLQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+S + + +S LE++++ G + G+L +++ T T G
Sbjct: 243 ------------VTQSYEPNQYLQMSHIVQTNLELIKSTKTGKKMGSLFWLLDKTSTAMG 290
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL+ W+ PL + I +R V+ + + Y+
Sbjct: 291 GRLLKSWIERPLISLSEIKSRQLVVTALFDD---------------------------YF 323
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDGEY 555
++ L D++R R+ +A E + + ++ + + L + +
Sbjct: 324 SREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLNNF 383
Query: 556 REKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
+K+ K +H ++K ++ +P LST KE II +G S
Sbjct: 384 AQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKSGVSS 421
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN-WA 671
++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+ +
Sbjct: 422 QLDRYRDAMINGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKNKVPLDRYM 481
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY + E+ + A + T + + + ++ Y Q + L+
Sbjct: 482 RKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQLS 541
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAE 790
+LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND + E
Sbjct: 542 SLDVLATFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD-E 598
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 599 QTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFDKIFTRIGAGDDLIS 658
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
G+STF+ E++EA+ L N T +SL++ DE+GRGT+T+DG+A+A A + YL + LF
Sbjct: 659 GKSTFMVEMSEANIALNNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKTLF 718
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ D+ + + HV ++ + + +L+K++PG ++ S+G
Sbjct: 719 ATHYHELTDLDQEL-AHLKNIHVG-----------ATQENGHLIFLHKILPGAADQSYGI 766
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
VAQLA LP + AT + +LE ++ + DL K+SD+EQ+
Sbjct: 767 HVAQLAGLPTKVLREATHMLKQLEKHSDNQAAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|384246687|gb|EIE20176.1| hypothetical protein COCSUDRAFT_18682, partial [Coccomyxa
subellipsoidea C-169]
Length = 1204
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 279/968 (28%), Positives = 425/968 (43%), Gaps = 117/968 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
K P +P +P TL IP K + ++Q E K ++ D +++ ++G + F
Sbjct: 240 KRPGQPGYNPRTLY-IP---HDWFKKAKVSEGQRQWWEFKAQHFDSVMLFKMGKFYEMFE 295
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAI----- 175
DA + A+VLG+ ++ P +H RLV AG +V VV+QTET +
Sbjct: 296 MDAHVGAEVLGL-TYMKGEQPHCGFPEVNYLMHAERLVRAGLRVVVVEQTETPDMLRIRN 354
Query: 176 --KAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
+ G K R + A+ T TL A D+ + E+ Y++ + +
Sbjct: 355 DNRPAGQAKCNVVRREVVAILTTGTL-ADPDMLRTQP----EAAYVLSLWERPAPPVAPG 409
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQ 292
LG + ++ + G+++D RS L A L + P+EL+L LS+
Sbjct: 410 GPQ-----RTLLGACYADCASNTLTLGQWHDDLTRSQLRAQLAEMRPSELVLPAGGLSEA 464
Query: 293 TEKML-LAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQ 351
T+++L A GP +N AS I + S M E
Sbjct: 465 TQRVLKAALRGPRTNRLAAPASAADVIHELDTRDYFSCAAGM----------------EA 508
Query: 352 GNHRS--AIEGIMNMPDLAVQALALTIRHLKQFGLE-RIMCLGASFRSLSGSMEM----- 403
G+ + ++ + A+ AL L RHL++ L+ R++ LGA FR L G +
Sbjct: 509 GSRDAWPSLLKEPAEAEAALLALGLARRHLQEVLLDGRVLPLGA-FRPLPGCARVAGADA 567
Query: 404 --------TLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDR 455
L + LEVL N GS G+L+ ++ T+ G R LR W+ P+
Sbjct: 568 APDAPRFVALDGSAFDNLEVLENTEGGSA-GSLVACLDMCTTVMGKRQLRAWLCRPMARI 626
Query: 456 NLISARLDA----VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGR 511
I+AR DA V + R E L LG
Sbjct: 627 ADITARQDAGLVPVIVLLAPASPARARE--------------------------LFRLG- 659
Query: 512 SPDIQRGITRIFHRTATPSEFIAVMQAILY---AGKQLQQL--HIDGEYREKVTSKTLHS 566
D++R + R+ + +T +E AI Y A +++ L + G + L S
Sbjct: 660 --DLERALARL--QASTLAEGEGTNAAIYYEDTAKRKVLSLITALRGLQSVQQMGSELGS 715
Query: 567 ALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSA 626
L+RL + PA G A L +Q L +I G + A V +
Sbjct: 716 EELRRLTM---GPAAAGMARPLKELQAFTDWEQAAELGRVIPHPGAEAAFDNADARVAAV 772
Query: 627 KEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHS 684
+ E + + +K+LG ++ ++SV+ +HL+++P A VP ++ V K RY S
Sbjct: 773 EAEFEQHLKEVKKKLGCSSISYVSVNKDSHLLDIPDSAAGSVPSSYELVGQKKGWKRYRS 832
Query: 685 PEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL-- 742
P + A EE ++ F +A ++AAV+A+A LD L +LA +
Sbjct: 833 PRSADLVRDHTAAQEEREAALSTILQGVVRRFAREHAVWEAAVEAMAELDALMSLAAVAD 892
Query: 743 --SRNKNFVRPVFVDDHEPVQIHICSG-RHPV--LDTILLDNFVPNDTNLHAEREYCQII 797
S RP V QI G RHP L F+PND L ++ I+
Sbjct: 893 VGSAQGPMCRPRLVPADRDRQIFTAKGLRHPSAGLHMSAGATFIPNDVELGGDKAPFIIL 952
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNMGGKS +RQV L +MAQVG++VPA S EL +D I+ RMGA D+I G+STFL
Sbjct: 953 TGPNMGGKSTLLRQVCLAALMAQVGAWVPAVSLELTPVDAIFVRMGARDAIMTGQSTFLV 1012
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
EL E + L T+ SLV +DELGRGT+T DG AIA A + + KC LF THY K+
Sbjct: 1013 ELIETAAALNRATSASLVALDELGRGTATTDGAAIAAAVIHAFTQRIKCRGLFATHYHKL 1072
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
AD T + ++ H D+ + VT+LY++ G S+G A+LA
Sbjct: 1073 ADAHADDP----TTSIRHMACHV---DRDAAGREQVTFLYQLQDGACPKSYGTACARLAG 1125
Query: 978 LPPSCISR 985
+P + + R
Sbjct: 1126 MPDAILDR 1133
>gi|302416361|ref|XP_003006012.1| DNA mismatch repair protein msh6 [Verticillium albo-atrum VaMs.102]
gi|261355428|gb|EEY17856.1| DNA mismatch repair protein msh6 [Verticillium albo-atrum VaMs.102]
Length = 1193
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 315/635 (49%), Gaps = 61/635 (9%)
Query: 366 DLAVQALALTIRHLKQFGLERIMCLGASFR---SLSGSMEMTLSANTLQQLEVLRNNSNG 422
DLA+ +L +++L+ +E+ + +F + + + L TL LEV N++NG
Sbjct: 565 DLAMSSLGALVKYLQLLKIEQSLLSQGNFEWYNPIRRNGTLILDGQTLINLEVFANSANG 624
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
S GTL ++N +T +G RL R+WV HPLCD + I+ RLDAV
Sbjct: 625 STEGTLFTLLNKCVTPFGKRLFRQWVCHPLCDIDRINERLDAV----------------- 667
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
D NSD ++ E QF S+ +T + PD++R I+RI P +F+ V++
Sbjct: 668 --DMLNSDRSVRE-QF----SAQMTKM---PDLERLISRIHAGVCRPDDFVKVLEGFEQI 717
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
+ L G + L+ RLI +S P + + + ++ A
Sbjct: 718 EYTMSLLGAWGGGK----------GLVDRLI--SSMPNLDEPLSYWKTAFDRMKAKND-- 763
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA 662
+ + G + ++ + K++L L+ + +L + L+F + IE P
Sbjct: 764 -RMFLPERGIEEDFDESQDRIAEIKKDLGKLLEKKKAELKCKTLKFTDIGKEIFQIEAPK 822
Query: 663 NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
+ KVP +W ++++T RY+ + + L A E + + F + F Y
Sbjct: 823 STKVPSSWRQMSATSSVKRYYFDALTELVRDLQEAEETHGQIMKEVASRFFRRFDTDYTT 882
Query: 723 FQAAVQALAALDCLHALATLSRN--KNFVRPVFVDDHEPVQIHICSGRHP-VLDTILLDN 779
+ A++ ++ LDCL +LA S + + RP FVD+ + + RHP +L+T+ +
Sbjct: 883 WLQAIRIISQLDCLVSLAKASSSLGEPSCRPQFVDEERSL-VEFDELRHPCMLNTV--SD 939
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
F+PN L ++TG N GKS +R IMAQ+G +VPA+SA L +D I
Sbjct: 940 FIPNAIELGGNSAKINLLTGANAAGKSTVLRMTCTAVIMAQIGCYVPATSARLTPVDRIM 999
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
+R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGVA+A A L +
Sbjct: 1000 SRLGANDNIFASQSTFFVELSETKKILAEATPRSLVILDELGRGTSSYDGVAVAQAVLHH 1059
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
+ H C+ F THY +A T+F + + ++ +D ++++ VT+LYK+
Sbjct: 1060 VATHVGCIGFFATHYHSLA---TEFENH------PEVRARRMQIHVD-EAERRVTFLYKL 1109
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
GV+E SFG A + + I RA V A + E
Sbjct: 1110 EDGVAEGSFGMHCAAMCGINNRIIERAEVAAREWE 1144
Score = 46.6 bits (109), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
K+P P+ +P ++ IP P + K++P E+Q +K D ++ + G F +
Sbjct: 305 KSPGDPEYNPSSIY-IP-PGAWN----KFSPFEKQYWAIKQNLWDTIVFFKKGKFFELYE 358
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA 173
DA + ++ N +P L++ V + V GFKV V Q E+A
Sbjct: 359 NDATIGHQLFDFKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQMESA 411
>gi|167619450|ref|ZP_02388081.1| DNA mismatch repair protein [Burkholderia thailandensis Bt4]
Length = 893
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 255/926 (27%), Positives = 412/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K ++P+ L+ +G + F EDAE AA++L + A A
Sbjct: 23 HTPMMQQYLRIKVEHPETLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 82
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 83 GVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 136
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D +L+ + VG + GV +G+ + +++G + E
Sbjct: 137 LLSDKSD------VFLLALC-----VGHNKRGVAST-----IGLAWLNLASGALRLAEIA 180
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 181 PDQLGAALERI----RPAEILAADGAIEAVP------AGTGAITRVPAWHFDIASGTQRL 230
Query: 324 A---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
EV SL + G L++ + G + + A Q L RH++
Sbjct: 231 CDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHVR 273
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+E + S + L +T + LE L G+E TL +++ T G
Sbjct: 274 SLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAMG 320
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLLR W+ HP SV + T+++ +
Sbjct: 321 SRLLRHWLHHP-------------------------PRASVAAQARHQAIGTLLDAPVHV 355
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L S+ ++L + D++R R+ +A P + ++ ++ A L RE+V
Sbjct: 356 GLDSLRSALRQIADVERITGRLALLSARPRD-LSSLRDTFAALPAL---------RERVA 405
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEV 616
++A L RL P G L + E A D G +I+ G +E+
Sbjct: 406 EIAPNAAALGRLEAALEPPP--GCLDLLTRAIAPEPAAMVRDGG------VIARGYDAEL 457
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 458 DELRDISENCGQFLIDLETRERARTGIPNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 517
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +DS L+ + Q LA LD
Sbjct: 518 TLKNAERYITPELKTFEDKALSAQERALARERALYDSVLQALLPHIEGCQRVASGLAELD 577
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F+D+ + I I GRHPV++ ++ F+ ND L+++R+
Sbjct: 578 LLAAFAERARTLDWVAPEFIDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNSDRKLL 633
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRST
Sbjct: 634 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRST 692
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL H +C LF THY
Sbjct: 693 FMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHY 752
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 753 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVAQ 800
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 801 LAGVPAPVIRAARKHLAHLEQQSAAQ 826
>gi|334128878|ref|ZP_08502756.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
gi|333386120|gb|EGK57340.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
Length = 863
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 252/917 (27%), Positives = 406/917 (44%), Gaps = 139/917 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ + K +P+ LL +G + F +DA++AAK LG+ LD + M
Sbjct: 7 TPMMQQYLSAKEAHPNELLFFRLGDFYEMFFDDAKIAAKELGLTLTSRSGDLDKSPM-CG 65
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + ++ RLV GFKV + +Q P G R + + T T +
Sbjct: 66 VPYHAADSYIARLVAKGFKVAIAEQI-------GDPKAKGLTHREVVKVVTPGTTLS--- 115
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+D +N + ++ + +G F + +ISTG+ Y +
Sbjct: 116 ----DDLLRDAANNYIALLHEK------EDGTFV--------LAGADISTGESFYASYAG 157
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASR--DCFIGGGA 322
+ L AELL+ + S A +VR R C IG A
Sbjct: 158 ENAAQQMLDELYRRMAAELLMTEGFSL------------ADDVRAFAVQRLPHCAIGAVA 205
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
+D L ++P R+A+ ++ V A + HL
Sbjct: 206 ---------PQTDDELLVQHFPAAEIPTDAGTRTAVATLLRYLHDTVMADLSQLNHL--- 253
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
SF L + M L TL+ LE+ R+ +G + TL +++ T T G+R
Sbjct: 254 ----------SF--LDAADTMQLDTYTLRNLEITRSLRDGGKKNTLFDVLDFTRTPMGTR 301
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LL+ W+ HPL + I ARLDAV+E+ E P +
Sbjct: 302 LLKSWLEHPLLVPHRIDARLDAVAELVEK-----------------------SP----LR 334
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
+S+ L D +R +TRI +TA + +A ++ L A +++ T
Sbjct: 335 ASLRDHLRSVYDFERLLTRIETQTANARDLVA-LRVSLAALPAIRE-----------TLS 382
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL--LNLMIISNGQFSEVARAR 620
T S LL R+ A I +L T+ + D+ L II G + +
Sbjct: 383 TAESNLLTRVY------AAIQTFDELRDTLERAIVDEPGLSVREGGIIRTGYDAALDELH 436
Query: 621 KAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKK 678
+K L + R + G++ L+ + V G + +VP ++ + +
Sbjct: 437 AFSHDSKTLLQEMEERERTRTGIKTLKIGYNKVFGYYIEVRHSGRDQVPDDYIRKQTLAN 496
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
T R+ + E+ ++ A E++T + + ++ Q +A+A +D L +
Sbjct: 497 TERFITEELKVFEAKILGAEEKITALEYHIFTQLREQVKAQLVPIQNVARAIARVDVLQS 556
Query: 739 LATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQII 797
LA + + +VRP I I GRHP+++ IL + FVPNDT++ +I
Sbjct: 557 LAEAAASYRYVRPRVTAGG---AILIRDGRHPLVERILQREVFVPNDTDISHGGTETMLI 613
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS Y+RQVAL+ +MAQVGSFVPA +AE+ +D I+TR+GASD + G+STF+
Sbjct: 614 TGPNMAGKSTYMRQVALLTLMAQVGSFVPARTAEIAPVDRIFTRIGASDDLVSGQSTFMV 673
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
E+NE + ILR T SLVI+DE+GRGTST DG++IA A ++++ LF THY ++
Sbjct: 674 EMNEVAQILREATRDSLVILDEIGRGTSTFDGMSIARAVVEHIDTRIHAKTLFATHYHEL 733
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
D++ + + Y ++ + + V +L ++V G ++ S+G VA+LA
Sbjct: 734 TDMENE---RIRNYCIAV-----------REKGKKVAFLRRIVAGAADKSYGIHVARLAG 779
Query: 978 LPPSCISRATVIAAKLE 994
LP RA I LE
Sbjct: 780 LPAKVTERAEEILHALE 796
>gi|259501313|ref|ZP_05744215.1| DNA mismatch repair protein HexA [Lactobacillus iners DSM 13335]
gi|302190963|ref|ZP_07267217.1| DNA mismatch repair protein MutS [Lactobacillus iners AB-1]
gi|259167283|gb|EEW51778.1| DNA mismatch repair protein HexA [Lactobacillus iners DSM 13335]
Length = 854
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 242/957 (25%), Positives = 430/957 (44%), Gaps = 161/957 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + + G+ G+ ++STG
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSN------------SQGW----GLTYCDLSTG----- 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI-- 318
E+ L+ E+++ + LS QT +++ + + F+
Sbjct: 149 -----------ESYATHLTSWEMIVNELLSLQTRELVYG--------ETLTSDKQIFLKK 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
G L++ + L + E + V +Q +++ I + + ++ H
Sbjct: 190 AGITLSQPVKLSKEHAEVSY---------VTQQLHNQLEIAATKQLLAYLLATQKRSLAH 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L+ +S + + +S LE++++ G + G+L +++ T T
Sbjct: 241 LQ------------VTQSYEPNQYLQMSHIVQTNLELIKSAKTGKKMGSLFWLLDKTSTA 288
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL+ W+ PL + I +R V+ + +
Sbjct: 289 MGGRLLKSWIERPLISLSEIKSRQLVVTALFDD--------------------------- 321
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDG 553
Y+ ++ L D++R R+ +A E + + ++ + + L +
Sbjct: 322 YFSREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLN 381
Query: 554 EYREKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
++ +K+ K +H ++K ++ +P LST KE II G
Sbjct: 382 DFAQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKAGV 419
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN- 669
S++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+
Sbjct: 420 SSQLDRYRDAMMNGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKDKVPLDR 479
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY + E+ + A + T + + + ++ Y Q +
Sbjct: 480 YMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQ 539
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
L++LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND +
Sbjct: 540 LSSLDVLSTFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD 597
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 598 -EQTNIFLITGPNMSGKSTYMRQLALIIIMAQMGCFIPADSAVLPIFDKIFTRIGAGDDL 656
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
G+STF+ E++EA+ L+N T +SL++ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 ISGKSTFMVEMSEANIALKNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKT 716
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ D+ + HV ++ + + +L+K++PG ++ S+
Sbjct: 717 LFATHYHELTDLDQEL-AHFKNIHVGA-----------TQENGHLIFLHKILPGAADQSY 764
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
G VAQLA LP + AT + +LE ++ + DL K+SD+EQ+
Sbjct: 765 GIHVAQLAGLPTKVLREATHMLKQLEKHSDNQAAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|312130476|ref|YP_003997816.1| DNA mismatch repair protein muts [Leadbetterella byssophila DSM
17132]
gi|311907022|gb|ADQ17463.1| DNA mismatch repair protein MutS [Leadbetterella byssophila DSM
17132]
Length = 864
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 251/919 (27%), Positives = 424/919 (46%), Gaps = 136/919 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT----A 143
K TPL +Q ++K KYP +L+ VG + FGEDA A+K+LGI +N + A
Sbjct: 5 KETPLNKQYNQIKAKYPGAMLLFRVGDFYETFGEDAIKASKILGIVLTRRNNGGSNDELA 64
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL--EA 201
P L+ ++ +LV AG +V + Q E G RG++ L T +
Sbjct: 65 GFPHHSLDTYLPKLVRAGQRVAICDQLEDPKTVK------GIVKRGVTELVTPGVSFNDN 118
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
DV ++NYL + ++ +GV ++ISTG+ +
Sbjct: 119 VLDVR--------QNNYLASLHFASEDL---------------IGVAFLDISTGEFFTTQ 155
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ ++ + ++ SPAE+L + K+ E++ G N
Sbjct: 156 GSLAYV----DKLIQGFSPAEILYCKKHKKRFEQVF----GEKYNTY------------- 194
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ + Y+ + + + + N+ +G G+ N+ + V A + +++LK
Sbjct: 195 TFEDWVFTYDFAYDQLIQHFKTNNL----KGF------GVENLQE-GVTAAGVILQYLKD 243
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ + R L + L T++ LE+L + G L+ I++ T+T G+
Sbjct: 244 TEHREVDHINRLTR-LDQEQYVWLDRFTIRNLELLFSPHEGG--VPLIDILDQTVTPMGA 300
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLR+W+ PL ++ I RL+ V A + Q
Sbjct: 301 RLLRKWLVLPLKNKAQIEERLNTVQYFAG------------------------DDQVLQN 336
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L VL +G D++R ++++ R P E + + +A L + L++L + EK+T
Sbjct: 337 LIQVLKPIG---DLERLVSKVAVRRINPREMVQLKKA-LAQIEPLKELLVGHPSMEKLTG 392
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
+ L + K + L +QG + I G + + K
Sbjct: 393 QLNDCKFL------------VEKIERELRDDAPTQMNQGGM-----IKTGVDAPLDELHK 435
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKT 679
S K+ L + N ++ G+ +L+ + V G + KVP W + +
Sbjct: 436 IAFSGKDYLVDIQNRESERTGIPSLKIAYNKVFGYYLEVSNAHKDKVPQEWIRKQTLVNA 495
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY + E+ +Q+ A ++ + ++ + Y Q + ++ LD L +
Sbjct: 496 ERYITEELKVYEEQILTAESKINEIEFRIFNELVLTAAEYVNVIQENARVISNLDALLSF 555
Query: 740 ATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREYCQII 797
A ++ + RPV ++ ++ I GRHPV++ L +++VPND L E + II
Sbjct: 556 ARVALKNGYARPVITEEK---RLDIKGGRHPVIEQQLPTGESYVPNDLYLDDEEQQIIII 612
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS +RQ ALI +MAQ+GSFVPA+SAE+ ++D I+TR+GA+D++ +G STF+
Sbjct: 613 TGPNMAGKSALLRQTALIVLMAQIGSFVPAASAEVGIVDKIFTRVGANDNLSRGESTFMV 672
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVLFVTHYP 915
E+ E + IL N +SLVI+DE+GRGTST+DGV+IA++ +YL HKK LF THY
Sbjct: 673 EMTETASILNNLGDRSLVIMDEIGRGTSTYDGVSIAWSIAEYLHNHKKQRPRTLFATHYH 732
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ ++ F + ++V+ + M+ K V +L K+ G SE SFG VAQL
Sbjct: 733 ELNNLSNDFP-RIKNFNVA-------VKEMNGK----VVFLRKLKEGGSEHSFGIHVAQL 780
Query: 976 AQLPPSCISRATVIAAKLE 994
A +P S + RA I +LE
Sbjct: 781 AGMPQSVVLRANEILQELE 799
>gi|393762777|ref|ZP_10351403.1| DNA mismatch repair protein MutS [Alishewanella agri BL06]
gi|392606399|gb|EIW89284.1| DNA mismatch repair protein MutS [Alishewanella agri BL06]
Length = 853
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 259/936 (27%), Positives = 412/936 (44%), Gaps = 157/936 (16%)
Query: 79 PSSQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--- 133
PS Q +TP+ QQ + LK+++P +LL +G + F EDA+ AA +L I
Sbjct: 2 PSDQKPEQALSNHTPMMQQYLALKSQHPQILLFYRMGDFYELFYEDAKKAAALLDISLTK 61
Query: 134 --AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS 191
A +P + ++ RLV G V + +Q A GP R +
Sbjct: 62 RGQSAGEPIPMAGVPYHAVEGYLARLVQLGESVAICEQIGDPATSK------GPVERKVV 115
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
+ T T+ + +D L+C + + + G+ ++
Sbjct: 116 RIVTPGTVTDEALLNERQDN-------LLCAISESRS---------------HFGLAQLD 153
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
+++G + + + L A+L L+PAELL + S P R
Sbjct: 154 LTSGRFLLNQVSHA---DDLAALLQRLNPAELLYPENFSL-----------PHLTERKGA 199
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA 371
R + A AE + L + G L Q+ V E A +M +A
Sbjct: 200 RRRPVWEFELASAERL-LCQQFGTRDL-----QSFGVMEAPVALMAAGCLMQYVKDTQRA 253
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+ HL+ LER F + L A T + LE+ S +E+ TL +
Sbjct: 254 ---QLPHLRSIALER----PDDF--------IVLDAATRRNLELTHTLSGQTEH-TLAAV 297
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T T GSRLL+RW+ PL +R ++ RLDAV E+ E D
Sbjct: 298 LDKTQTAMGSRLLKRWIHAPLRNRTQLNQRLDAVQELTE-------------------DF 338
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI----------LY 541
++P SL + DI+R + R+ R+A P +F + QA+ L+
Sbjct: 339 QALQP-----------SLKQIGDIERILARLALRSARPRDFARLRQALTELPELQQQLLH 387
Query: 542 AGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
A Q+ Q H ++ T A L + + S P +I D G
Sbjct: 388 ANSQVLQQH------QQATLPLPELAELLQRAIVESPPVLI--------------RDGG- 426
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIE 659
+I+ G +E+ R + A + L L R++ G+ +L+ F + G
Sbjct: 427 -----VIAPGYDAELDEWRALAEGATDYLQQLELRERERTGISSLKVGFNKIHGFYIETG 481
Query: 660 LPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
A+ +VP + + + K RY PE+ D++ + + + + +D+ Y
Sbjct: 482 RSADTRVPPEYVRRQTLKNNERYIIPELKEYEDKVLGSQSKALALEKQLYDALFDAVSPY 541
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
A+ Q QAL+ LD L + A + + RP+ E + I + RHPV++ +L
Sbjct: 542 LAQLQQLAQALSELDVLCSFAECAVLYQYCRPLLT---EQIGIQLTQARHPVVERVLKAP 598
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
F+ N L A R +ITGPNMGGKS Y+RQ ALI +MA +GSFVPA A + +D I+
Sbjct: 599 FIANPLQLDASRRML-MITGPNMGGKSTYMRQTALIALMAAIGSFVPAEQAVIGPIDRIF 657
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR+GASD + GRSTF+ E+ E + IL + TAQSLV++DE+GRGTST+DG+++A+A DY
Sbjct: 658 TRIGASDDLASGRSTFMVEMTETATILHHATAQSLVLMDEIGRGTSTYDGLSLAWACADY 717
Query: 900 LLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYK 958
L + + LF THY ++ + + +V H +D+ D + +++
Sbjct: 718 LANKLQALTLFATHYFELTSLAQQLP-AVANVH------------LDAVEHGDGIVFMHH 764
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
V G + SFG +VAQLA +P I A +LE
Sbjct: 765 VQEGAASKSFGLQVAQLAGVPRPVIQLARQKLRQLE 800
>gi|309805987|ref|ZP_07700013.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV 03V1-b]
gi|308167590|gb|EFO69743.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV 03V1-b]
Length = 854
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 242/957 (25%), Positives = 430/957 (44%), Gaps = 161/957 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + + G+ G+ ++STG
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSN------------SQGW----GLTYCDLSTG----- 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI-- 318
E+ L+ E+++ + LS QT +++ + + F+
Sbjct: 149 -----------ESYATHLTSWEMIVNELLSLQTRELVYG--------ETLTSDKQIFLKK 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
G L++ + L + E + V +Q +++ I + + ++ H
Sbjct: 190 AGITLSQPVKLSKEHAEVSY---------VTQQLHNQLEIAATKQLLAYLLATQKRSLAH 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L+ +S + + +S LE++++ G + G+L +++ T T
Sbjct: 241 LQ------------VTQSYEPNQYLQMSHIVQTNLELIKSAKTGKKMGSLFWLLDKTSTA 288
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL+ W+ PL + I +R V+ + +
Sbjct: 289 MGGRLLKSWIERPLISLSEIKSRQLVVTALFDD--------------------------- 321
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDG 553
Y+ ++ L D++R R+ +A E + + ++ + + L +
Sbjct: 322 YFSREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLN 381
Query: 554 EYREKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+ +K+ K +H ++K ++ +P LST KE II +G
Sbjct: 382 NFAQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKSGV 419
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN- 669
S++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+
Sbjct: 420 SSQLDRYRDAMMNGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKDKVPLDR 479
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY + E+ + A + T + + + ++ Y Q +
Sbjct: 480 YMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQ 539
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
L++LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND +
Sbjct: 540 LSSLDVLATFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD 597
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 598 -EQTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFDKIFTRIGAGDDL 656
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
G+STF+ E++EA+ L N T +SL++ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 ISGKSTFMVEMSEANIALNNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKT 716
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ D+ + + HV ++ + + +L+K++PG ++ S+
Sbjct: 717 LFATHYHELTDLDQEL-AHLKNIHVGA-----------TQENGHLIFLHKILPGAADQSY 764
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
G VAQLA LP + AT + +LE ++ + DL K+SD+EQ+
Sbjct: 765 GIHVAQLAGLPTKVLREATHMLKQLEKHSDNQAAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|256078667|ref|XP_002575616.1| hypothetical protein [Schistosoma mansoni]
gi|360043418|emb|CCD78831.1| hypothetical protein Smp_042670.1 [Schistosoma mansoni]
Length = 1074
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 273/1030 (26%), Positives = 440/1030 (42%), Gaps = 156/1030 (15%)
Query: 48 PAKRKVVSSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVL 107
P+K K ++ + P P+ HTL P T K TP +Q ELK++Y DV+
Sbjct: 97 PSKIKDING----RRPDHPEYDSHTLY---VPEEFKT---KQTPGMRQWWELKSRYTDVI 146
Query: 108 LMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVV 167
L +VG + + DA + K LG+ + +F P +LV G+KV +
Sbjct: 147 LFFKVGKFYEMYHMDAMIGVKELGL-VFMKGSFAHCGFPEVAFPRMADQLVRKGYKVARI 205
Query: 168 KQTETA-AIKAHGPGKAGP---FGRGLSALYTKATLEAA-EDVGGGEDGCGGESNYLVCV 222
+QTE+ A+ K+ R + + T T A+ D+ ++L+ V
Sbjct: 206 EQTESIDAMNERCKRKSSSEKVVRREVCQIITPGTCTASTRDLIN----LAHPDSFLLAV 261
Query: 223 VDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAE 282
V+ G+ + G+ + STG + G+F D S L L P +
Sbjct: 262 VESHGD----------KSYPFAFGIGLLNASTGKINIGQFLDDRHCSRLRTFLSHYPPNQ 311
Query: 283 LLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMS--LYENMGEDTL-- 338
LL+ + + K L+ + ++ + + E+ + + +T
Sbjct: 312 LLIERGTAGSAIKSLIKTSLSCVPTEFLTPTKQFWSAKNTVQELETADYFPKQTSNTTVD 371
Query: 339 SNNEDQNMDVPEQGNHRSAIEGIMNMPD-----------LAVQALALTIRHLKQFGLER- 386
SN+ + P++ N + +++ D LA + L I +L+ ++R
Sbjct: 372 SNHVSKVSSFPDKENWPDVLLNMLSEDDPLGRTVKSEWELAFRCLGALIYYLRYCLIDRE 431
Query: 387 IMCLG------------ASFRSLSGSME--------MTLSANTLQQLEVLRNNSNGSEYG 426
++ LG A+ + GS+E M L TL L+++RNN +GS+ G
Sbjct: 432 VLSLGFIDVYVPIDMKNANSQRSPGSIELFYDTQSQMVLDNITLSNLDIIRNNVDGSQEG 491
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+LL +N T +G RLLR+W+T P C+ N+I R A+ +
Sbjct: 492 SLLQRLNTCCTFFGRRLLRQWITAPPCNPNVIRQRQLAIENL------------------ 533
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTAT------PSEFIAVMQAIL 540
++I + I+ + L + PD++R IT+I H + P + + +
Sbjct: 534 ----ISISD-----IIPKLREKLAQLPDLERLITKI-HLLGSKGDKNHPDSRAIIFEEVQ 583
Query: 541 YAGKQLQQL--HIDG-EYREKVTSKTLH----SALLKRLI----LTASSPAVIGKAAKLL 589
Y+ K + +DG E K+ + H SA LK+L+ L + P + K
Sbjct: 584 YSRKNIIDFVATLDGFELSYKIIHEINHYPLSSAYLKKLVTLTNLGGNFPDITEKINYFK 643
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ + E A + + G E + ++ E++D + K G R L +
Sbjct: 644 NAFDAEKAKRE---GRITPEPGIDPEYDESLSEIKRIVEDMDRFLLKWSKTFGTR-LAYW 699
Query: 650 SVSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRA 707
+ IE+P + +VP +W + K RY E L +L A E R+
Sbjct: 700 GTGRNRYQIEIPESLASRVPNSWQLSSQRKGVKRYTCSETQEWLSELTAAEERKDASLRS 759
Query: 708 AWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVR--PVFVD---DHEPVQI 762
F + + A+ LA LDC+ AL S N + V P F+D EP+ +
Sbjct: 760 IMQHIFSSFSESFTHWHMAMSCLAELDCIIALYLYSTNASDVMCLPEFIDLNSSTEPL-L 818
Query: 763 HICSGRHPVL-DTILLDNFVPNDTNLHAEREYCQ------------------IITGPNMG 803
I G HP L +T + + ND L ++TGPNMG
Sbjct: 819 EIVDGIHPCLINTFSGGDIISNDIKLGTTSSMINSPTQHHTLHDMFNNASVILVTGPNMG 878
Query: 804 GKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEAS 863
GKS +RQ AL+ I+A +G +PA S +L +D I++R+GASD + G STFL EL+E +
Sbjct: 879 GKSTLMRQAALLVILAHLGCRIPAKSCKLTPVDRIFSRLGASDRMLSGESTFLVELSETA 938
Query: 864 YILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL-------LEHKKCMVLFVTHYPK 916
IL + T SLV++DELGRGTSTHDG A+A A + YL LF THY
Sbjct: 939 SILHHITPHSLVLMDELGRGTSTHDGSALAGAVVSYLAKPNGRFFNGSGPRTLFSTHYHS 998
Query: 917 IADI---KTKFTGSVGTYHVSYLTSH-KVMGPMDSKSD---QDVTYLYKVVPGVSESSFG 969
+ D K + T H+ H M +S+S +++T+LYK +PG S+G
Sbjct: 999 LVDQVANKDRSTSDEDINHLCIGLGHMACMVEAESESTNGLENITFLYKFIPGACPKSYG 1058
Query: 970 FKVAQLAQLP 979
F A+LA LP
Sbjct: 1059 FNAARLAMLP 1068
>gi|348618181|ref|ZP_08884712.1| DNA mismatch repair protein MutS [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816552|emb|CCD29414.1| DNA mismatch repair protein MutS [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 903
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 266/968 (27%), Positives = 420/968 (43%), Gaps = 156/968 (16%)
Query: 74 NPIPTPSSQ-TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI 132
P P S++ T +TP+ QQ +++K+ YP++LL+ +G + F EDAE AA++L +
Sbjct: 4 KPRPARSARRATDIAAHTPMMQQYLKIKSGYPEMLLLYRMGDFYELFYEDAEKAARLLDL 63
Query: 133 Y-----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFG 187
A A +P L+ ++ RLV G V + +QT GP
Sbjct: 64 TLTQRGASNGQPIRMAGVPHHALDAYLARLVKLGESVAICEQT------GDPNASKGPVE 117
Query: 188 RGLSALYTKATLEAAEDVGGGEDGCGGESNYLV--CVVDD-DGNVGKIRNGVFGDGFDVR 244
R + + T TL A + +D YL+ C V + G + + F VR
Sbjct: 118 RKVVRVVTPGTLTDAALLADRQDA------YLLALCTVQNRSGGRAPLEH------FSVR 165
Query: 245 L----------------------------GVVAVEISTGDVVYGEFNDGFLRSGLEAVLL 276
L G+ + +++G + E + LE +
Sbjct: 166 LHKEQARRQYAQYGEREATQSKPLKNALIGLAWLNLASGALRLAEMAADEAPAALERI-- 223
Query: 277 SLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSL--YENMG 334
PAE+LL + + AGP + R+ + G L E + + E G
Sbjct: 224 --RPAEILLAD--ADSGPDAMEPPAGPGAVTRIPPWHFEIDSGRARLCEQLGVTHLEGFG 279
Query: 335 EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
LS +A + AV +RH+ +E
Sbjct: 280 AHHLS----------------AACGAAGAVLWYAVNTQGQPLRHIGSLQVE--------- 314
Query: 395 RSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCD 454
S + + L T + LE L G+E TLL ++ T GSRLLR W+ H D
Sbjct: 315 ---SETQYIGLDPATRRNLE-LTETLRGAESPTLLSRLDRCCTSMGSRLLRHWLHHAPRD 370
Query: 455 RNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPD 514
+ R A+ ++ R +++ Q + +D+ + + +L++ L D
Sbjct: 371 ARIAQRRQQAIGAWLQAPSGARALDTLRQSLRQIADIERITGRLA-LLTARPRDLAHLRD 429
Query: 515 --IQRGITRI-FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKR 571
IQ R A P+E + ++A L+A ALL+R
Sbjct: 430 TLIQLPCVRAHLADDALPAELLQGIEAALHAPDDCL-------------------ALLER 470
Query: 572 LILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELD 631
I A+ PA + + D G +I++G +E+ R ++ + L+
Sbjct: 471 AI--AAEPAALIR-------------DGG------VIAHGYDAELDALRALSENCGQFLN 509
Query: 632 SLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLT 689
L R + G+ NL E+ V G + KVP ++ + + K RY +PE+
Sbjct: 510 ELEARERARTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKA 569
Query: 690 ALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFV 749
D+ A+ +A +++ L+ Y A+ Q QALA LD L A A +R ++
Sbjct: 570 FEDKALSASGRALAREKALYEALLQTLSAYIADCQRIAQALAQLDVLAAFAERARLLHWA 629
Query: 750 RPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
P F + I I GRHPV++T +D FVPND L A+R+ +ITGPNMGGKS ++
Sbjct: 630 APEFGGE----GIEIEQGRHPVVET-QIDPFVPNDCRLSAQRKLL-LITGPNMGGKSTFM 683
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
RQ ALI +MA +GS+VPA A +D I+TR+GA D + GRSTF+ E+ EA+ IL
Sbjct: 684 RQTALIVLMAYIGSYVPARRARFGPVDRIFTRIGAQDDLAGGRSTFMVEMTEAAAILNGA 743
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG 929
T SLV++DE+GRGTST DG+A+A+A LL H +C LF THY ++ + +
Sbjct: 744 TPSSLVLIDEIGRGTSTFDGLALAWAIAHRLLAHNRCYTLFATHYFELTRLADE-CAQAA 802
Query: 930 TYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVI 989
H+S + + Q + +L+ V G + S+G +VAQLA +P I A
Sbjct: 803 NAHLSAV-----------EHAQGLVFLHAVQDGPASQSYGLQVAQLAGVPRPVIEAARAH 851
Query: 990 AAKLEAEV 997
A L ++
Sbjct: 852 LAHLSGDL 859
>gi|33600645|ref|NP_888205.1| DNA mismatch repair protein MutS [Bordetella bronchiseptica RB50]
gi|33568245|emb|CAE32157.1| mismatch repair protein [Bordetella bronchiseptica RB50]
Length = 865
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 265/921 (28%), Positives = 412/921 (44%), Gaps = 141/921 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTASIPTF 148
QQ + LK + +LL +G + F EDAE AA++L + N A IP
Sbjct: 3 QQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERAARLLNLTLTKRGNSNGTPIPMAGIPVH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
+ ++ RLV G V + +Q + AA K GP R + + T TL +
Sbjct: 63 AMEQYLARLVALGESVAICEQIGDPAAAK-------GPVERRIVRIVTPGTLTDEALLPA 115
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
D + VCV GK + R G+ + +++G E G
Sbjct: 116 KAD----RALAAVCVT------GK---------REPRAGLAWLNLASGAFHVTECAPG-- 154
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE+ L ++PAEL+ Q E L A + RV F GA A+++
Sbjct: 155 --QLESELHRIAPAELI-------QAESAELHMAFEGARTRVPDWH---FEADGARAQLL 202
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
+ ++ D+L + ++M +A+ + A + + + H++ ER
Sbjct: 203 AHFKT---DSLGGFDVEDMP--------AAVCAAGALLRYAARTQSQALAHVQTIAAER- 250
Query: 388 MCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRW 447
+ L T + LE L +G E TL +++ T GSRLLRRW
Sbjct: 251 -----------PGQYVLLDPVTRRNLE-LTQTLSGEESPTLFSLLDGCRTPMGSRLLRRW 298
Query: 448 VTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLT 507
+ HPL + + AR A++ T + Q E+ +L ++
Sbjct: 299 LHHPLRENEPVLARQHAIA----------TMLTARQEGEQAFAAAA-------LLETLRD 341
Query: 508 SLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH-----IDGEYREKVTSK 562
+L PDI+R R+ R+ P E ++ A++ L LH + G R + +
Sbjct: 342 ALNAFPDIERIAARVALRSVRPRELASLRDALV----ALPALHASLAPLSGSPRARELAA 397
Query: 563 TLH-----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
L LL R + AS PAV + D G +I+ G SE+
Sbjct: 398 QLAMPPDIGELLARAV--ASEPAVAIR-------------DGG------VIAAGFDSELD 436
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNS 675
R + L L R++ G+ NL EF V G + KVP ++ + +
Sbjct: 437 ELRALATDGGDFLVQLEARERERTGIGNLRVEFNRVHGFYIEVSKGQTDKVPEDYRRRQT 496
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
K RY +PE+ T D++ A + + ++ L Y ALA LD
Sbjct: 497 LKNAERYITPELKTWEDRVLSAQDRSLAREKWLYEQLLDALAQYVRPLSQCASALAELDT 556
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
L ALA +R ++V P +D E I I +GRHPV++ + + F PN L R
Sbjct: 557 LAALAEHARRHDWVAPELIDGAE---IDIEAGRHPVVERAI-ERFTPNGCRLDQTRRML- 611
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNMGGKS Y+RQVALI ++A+ GSFVPA+ A + LD I+TR+GA+D + GRSTF
Sbjct: 612 LITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDRIFTRIGAADDLAGGRSTF 671
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
+ E+ EA+ IL T SLV++DE+GRGTST+DG+A+A+A LL H + + LF THY
Sbjct: 672 MMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIAYRLLTHNRALTLFATHYF 731
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ T+ T +L + + G + +L++V G + S+G +VAQ
Sbjct: 732 EL----TRLPAEQPTAANVHLAAAESAG--------GIVFLHEVREGPASRSYGIQVAQR 779
Query: 976 AQLPPSCISRATVIAAKLEAE 996
A +P + I +A+ +LEA+
Sbjct: 780 AGVPAAVIRQASRELERLEAQ 800
>gi|76800771|ref|YP_325779.1| DNA mismatch repair protein MutS [Natronomonas pharaonis DSM 2160]
gi|115299210|sp|Q3IUH3.1|MUTS_NATPD RecName: Full=DNA mismatch repair protein MutS
gi|76556636|emb|CAI48207.1| DNA mismatch repair protein MutS [Natronomonas pharaonis DSM 2160]
Length = 856
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 247/931 (26%), Positives = 407/931 (43%), Gaps = 163/931 (17%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDH 138
P + + TP+ Q +EL +Y D L++ +VG + F E AE A++L I
Sbjct: 8 PPAMAEKADELTPMLSQYLELCERYDDALVLFQVGDFYETFCEAAETTARLLEITLTQRE 67
Query: 139 N----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY 194
+ + A IP ++ L++AG++V V Q E A +G R ++ +
Sbjct: 68 DSTGTYPMAGIPIDNAESYIETLLDAGYRVAVADQVEAA------EAASGLVDRAVTRVV 121
Query: 195 TKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIST 254
T TL E + + +N++ C+ D G+ G+ +++ST
Sbjct: 122 TPGTLTETELLAEAD------NNFVACLTD---------------GY----GLALLDVST 156
Query: 255 GDVVYGEFNDGFLRSGLEAVLLSLSPAELLLG--QPLSKQTEKMLL------AYAGPASN 306
GD + +G+ L PAE ++G P E ++ A+ A+
Sbjct: 157 GDCYATRLD---RTAGVADELERFDPAEAVVGPDAPTDCFGEDCMVTPYERSAFELDAAR 213
Query: 307 VRVECASRDCFIGGGALAEVMSL--------YENMGEDTLSNNEDQNMDVPEQGNHRSAI 358
RVE + G ALA + Y T ++ E + +D Q
Sbjct: 214 ERVEA-----YFGSTALASDAEIRACGALLAYAEYARGTTTDGETEPLDYINQ------- 261
Query: 359 EGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR- 417
LT +++ M L A ++ LE+
Sbjct: 262 ---------------LTRYDPREY--------------------MLLDAVAVRSLEIFEP 286
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
+ +G E L+ ++ T + G R LR W+ PL D + I RLDAV + E + S R
Sbjct: 287 RHVHGLEGAALVETLDETASALGGRELRDWLRRPLLDADRIERRLDAVEALVERV-SDRE 345
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
S E+ +DV Y L ++ ++ R R + + + E A +
Sbjct: 346 RAS-----ERLADV--------YDLERLVAAVSRGRADARDLRALESTLSVVPELRACLD 392
Query: 538 AILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA 597
++L + RE++ T L+ R I+ SP V E
Sbjct: 393 DAAGESEKLASV------RERLDDCTAVRELIDRAIV--DSPPV-------------EIT 431
Query: 598 DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL 657
+ G +I +G + R + K +D L R++ G+ +L+ S +
Sbjct: 432 EGG------VIRDGYDERLDELRATERDGKAWIDDLEAKERERTGIDSLKVGHNSVHGYY 485
Query: 658 IEL--PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
IE+ P VP ++ + + K + R+++PE+ D++ A + + + S +E
Sbjct: 486 IEVTNPNLDAVPDDYQRRQTLKNSERFYTPELKEREDEIIRAEDRADELEYERFRSVREE 545
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
Q +A+A LD L ALAT++ ++ RP D I+I GRHPV++
Sbjct: 546 VAAATERIQETARAVAELDVLCALATVAAQYDYCRPTVDADG----IYIEGGRHPVVERT 601
Query: 776 LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
+FVPN T+L A E +ITGPNM GKS Y+RQVAL ++ Q+GSFVPA A + +
Sbjct: 602 E-SSFVPNPTDLPA-TEPLAVITGPNMSGKSTYMRQVALTSVLTQLGSFVPAERAAVPIF 659
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D ++TR+GASD I GRSTF+ E+ E S IL +SLV++DE+GRGTST DG AIA A
Sbjct: 660 DRVFTRVGASDDIAGGRSTFMVEMTELSTILDAADGRSLVVLDEVGRGTSTRDGYAIAQA 719
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
T +YL + LF TH+ ++ D+ + YH + +++ V +
Sbjct: 720 TTEYLHDEAGAFTLFATHHHELTDVAAELP-QARNYHFAA-----------ARTADGVEF 767
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRA 986
+ + PG +E+S+G +VA++A +P + + RA
Sbjct: 768 DHDLRPGAAEASYGVEVAEMAGVPEAVVDRA 798
>gi|404450318|ref|ZP_11015302.1| DNA mismatch repair protein MutS [Indibacter alkaliphilus LW1]
gi|403764054|gb|EJZ24970.1| DNA mismatch repair protein MutS [Indibacter alkaliphilus LW1]
Length = 870
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 242/927 (26%), Positives = 428/927 (46%), Gaps = 146/927 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---------AHLDH 138
K TPL +Q +K K+P LL+ VG + FGEDA A+++L I +H++
Sbjct: 10 KETPLMKQYNAIKAKHPGALLLFRVGDFYETFGEDAVTASRILDIVLTKRANGAASHIE- 68
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKA 197
A P L+ ++ +LV AG +V + Q E P + G RG++ L T
Sbjct: 69 ---LAGFPHHSLDNYLPKLVRAGNRVAICDQLE-------DPKEVKGIVKRGVTELVTPG 118
Query: 198 TLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
L ++V ++NYL + FG +LG+ +++STG+
Sbjct: 119 -LSFNDNVLDKR-----KNNYLASIY-------------FGKE---KLGISFLDLSTGEF 156
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
+ E + ++ E +L S +P+E++ + + +++L +D F
Sbjct: 157 MAAEGSQSYI----EKLLQSFAPSEVIYSKAFRSRAQEIL----------------KDNF 196
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
V Y+ E ++ N+ +G IE + + A+ A +
Sbjct: 197 TAFHCEDWVYQ-YDYTYEKLTNHFSTANL----KG---FGIESL----EYAIIAAGAVLF 244
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+L++ + + + AS ++ + L T++ LE++ + +G L++I++ ++T
Sbjct: 245 YLEETEHKEVKHI-ASISRIAEEKYVWLDRFTIRNLELVYSQQDGG--VPLINILDQSVT 301
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
GSR++++W+ PL ++ I RL V E N D+T
Sbjct: 302 PMGSRMMKKWMVLPLKEKEPIDDRLKVVEYFYE-----------------NPDLT----- 339
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+++ L D++R I+++ P E + +A+
Sbjct: 340 -----EEIISHLKHIGDLERLISKVAVGRINPREMNQLKKAL------------------ 376
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFSE 615
K T + I LL + +E + +L II++G +
Sbjct: 377 KNTLPIKSLLKSSKSDSLKRLSDQINSCEFLLEKIERELQEDAPMLIHQGNIINDGVDEQ 436
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKV 673
+ R S K+ L +L ++ G+ +L+ F V G + KVP W +
Sbjct: 437 LDEYRGLANSGKDYLVALQQREMQRTGISSLKVAFNKVFGYYLEVTNSHKDKVPEEWIRK 496
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY +PE+ +++ A E + + + + + +++ Y + Q + LA +
Sbjct: 497 QTLVNAERYITPELKEYEEKILNAEERMIAIEQKYFLALVQDASEYVTQIQQNARILATV 556
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAER 791
DCL + A ++++ N+ +P D + I GRHPV++ L + +VPND L E
Sbjct: 557 DCLLSFAVVAKSNNYCKPKVSDTD---SLEIKDGRHPVIEKQLPASEPYVPNDIFLDNES 613
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
+ IITGPNM GKS +RQ ALI +MAQ+GSFVPAS A + ++D ++TR+GASD++ +G
Sbjct: 614 QQIIIITGPNMAGKSALLRQTALIVLMAQMGSFVPASYARIGIIDKVFTRVGASDNLSKG 673
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVL 909
STF+ E+ E + IL N + +SLV++DE+GRGTST+DG++IA++ +++L H K L
Sbjct: 674 ESTFMVEMTETASILNNLSDRSLVLMDEIGRGTSTYDGISIAWSIVEFLHNHPKFRAKTL 733
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ + F + ++VS K MG V ++ K+ G SE SFG
Sbjct: 734 FATHYHELNQLTEDFP-KIKNFNVSV----KEMG-------NKVIFMRKLKEGGSEHSFG 781
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAE 996
VAQ+A +P + + RA+ I LE +
Sbjct: 782 IHVAQMAGMPNAVVLRASEIMQHLEKD 808
>gi|398830550|ref|ZP_10588736.1| DNA mismatch repair protein MutS [Phyllobacterium sp. YR531]
gi|398213987|gb|EJN00571.1| DNA mismatch repair protein MutS [Phyllobacterium sp. YR531]
Length = 907
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 260/968 (26%), Positives = 438/968 (45%), Gaps = 168/968 (17%)
Query: 67 KLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMA 126
+L+P + P + Q+ + TP+ +Q +E+K PD LL +G + F DA A
Sbjct: 3 ELAPSVMEQSPYEADQSV---RPTPMMEQYIEIKATNPDSLLFYRMGDFYELFFNDAVEA 59
Query: 127 AKVLGIY-----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG 181
++ LGI HL + +P + ++++L+ GF+V V +Q E A +A G
Sbjct: 60 SRALGITLTKRGKHLGEDIPMCGVPVHAADDYLQKLIARGFRVAVCEQVEDPA-EARKRG 118
Query: 182 KAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGF 241
R + L T T+ + + E +NYL+ + G+++ G
Sbjct: 119 SKSVVKRDVVRLVTPGTITEEKLLDPSE------ANYLMTL-------GRVK------GA 159
Query: 242 D-VRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY 300
D + + ++ISTG GE + S L A +L + P EL++ + E
Sbjct: 160 DKSQYALAWIDISTGTFRVGESD----ASRLLADILRVDPRELIVADTVFHDPEL----- 210
Query: 301 AGPASNVRVECASRDCF--IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAI 358
R F IG + SL+++ T N + +V +
Sbjct: 211 -------------RGVFDVIGRAVSPQPPSLFDSA---TAENRIQRYFEV-------GTL 247
Query: 359 EGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN 418
+G + A++ I ++++ L L R GS + + T LE+LR
Sbjct: 248 DGFGQFSRAELAAISGAIAYVEKTQLAERPPLMRPERESEGS-SLFIDPATRGNLELLRT 306
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
S G G+LL ++ T T G+RLL +T PL D + I+ RLD++S
Sbjct: 307 LS-GKREGSLLRAIDRTTTGGGARLLAERLTSPLTDPSAIAERLDSIS------------ 353
Query: 479 ESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRS-----PDIQRGITRIFHRTATPSEFI 533
+++ L L +S PD+ R ++R+ P +
Sbjct: 354 --------------------FFLARQSLADLMQSALKGVPDMPRALSRLAVGRGGPRDLG 393
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN 593
A+ + L A ++ QL + S+ L L + AS P + + ++
Sbjct: 394 ALARG-LEAASEISQLFL---------SEALPPELARVRECLASLPV------EFAAHLD 437
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+ AD+ LL +G F R +E+ +L + R+ + ++M ++G
Sbjct: 438 RSLADELPLLK----RDGGF-----VRAEYNPELDEMRALRDHSRRIIAGLQADYMEITG 488
Query: 654 ITHL-----------IELPANFKVPLN--------WAKVNSTKKTIRYHSPEVLTALDQL 694
I L IE+ AN + + + +R+ + E+ ++
Sbjct: 489 IRSLKIKHNNVLGYFIEVTANNSSVMTDSDEAKGKFIHRQTIANAMRFTTTELAELETKI 548
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
A A E + +D+ E +A AL+ LD ALA L+ + + RPV V
Sbjct: 549 ANAAERALSIELGIFDALTNETILNADFIRAGALALSTLDVSVALAALADEQGYCRPV-V 607
Query: 755 DDHEPVQIHICSGRHPVLDTIL----LDNFVPNDTNLH---AEREYCQIITGPNMGGKSC 807
DD V I +GRHPV++ L + FV ND NL + + ++TGPNMGGKS
Sbjct: 608 DDS--VAFEIVAGRHPVVEQSLRRKAANPFVANDCNLSPLTSGKGAIWLLTGPNMGGKST 665
Query: 808 YIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILR 867
++RQ ALI I+AQ+GSFVPA SA + ++D +++R+GASD + +GRSTF+ E+ E + IL
Sbjct: 666 FLRQNALIAILAQMGSFVPAGSAHIGIVDRLFSRVGASDDLARGRSTFMVEMVETAAILN 725
Query: 868 NCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGS 927
T SLVI+DE+GRGT+T DG++IA+A ++YL E +C +F TH+ ++ + K T
Sbjct: 726 QATDHSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNQCRAIFATHFHEMTSLSEKLT-- 783
Query: 928 VGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
+S +T + D +V +L++V G ++ S+G +VA+LA LP + ++RA
Sbjct: 784 ----RLSNVTMRV------KEWDGEVVFLHEVAKGAADRSYGVQVARLAGLPEAVVNRAR 833
Query: 988 VIAAKLEA 995
+ +LEA
Sbjct: 834 DVLHQLEA 841
>gi|21227785|ref|NP_633707.1| DNA mismatch repair protein MutS [Methanosarcina mazei Go1]
gi|452210265|ref|YP_007490379.1| DNA mismatch repair protein MutS [Methanosarcina mazei Tuc01]
gi|44888226|sp|Q8PWA7.1|MUTS_METMA RecName: Full=DNA mismatch repair protein MutS
gi|20906191|gb|AAM31379.1| DNA mismatch repair protein [Methanosarcina mazei Go1]
gi|452100167|gb|AGF97107.1| DNA mismatch repair protein MutS [Methanosarcina mazei Tuc01]
Length = 900
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 251/939 (26%), Positives = 426/939 (45%), Gaps = 152/939 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA------HLDHNFMTA 143
TP +Q E K YPD L+ +G + FGEDA+ AK L I A
Sbjct: 6 TPAMRQYYEAKQAYPDTLIFFRMGDFYESFGEDAKTIAKELEITLTARGKDRSGERMPLA 65
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTE----------TAAIKAHGPGKAGPFGRGLSAL 193
IP ++ ++ RL+N G+KV + +Q E ++ PG A S++
Sbjct: 66 GIPYHAIDTYLPRLINKGYKVAICEQLEDPKQAKGVVKRGVVRVVTPGTAID-----SSM 120
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
+ A+ +NYL+ V + VGK G G+ ++ G+ ++IS
Sbjct: 121 FPDAS-----------------NNYLMAVAGKE--VGK--TGKSGEK-EMEFGLSFLDIS 158
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
TG+ + +F D SG LLS LA PA EC
Sbjct: 159 TGEFLTTQFTD----SGSFDKLLSE-------------------LARMKPA-----ECIL 190
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR-------SAIEGI-MNMP 365
G L + + E T+ + E+ + S +EG+
Sbjct: 191 PPTLYGNSVLVD------RLREQTIVQEFAPEISGIEEAGEKLKIHFRVSTLEGMGCEKL 244
Query: 366 DLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEY 425
+ V + + + K + + + + R+ S + M L + TL+ LE+++N + ++
Sbjct: 245 EFGVYSAWSALEYAKTTQMRDLAHIN-TLRTYSNTEFMVLDSVTLRNLEIVKNVRDEGDH 303
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
+L ++ T T GSR+L++W+ PL I+ RLDAV E+A +
Sbjct: 304 NSLYRTLSFTKTPMGSRILKKWLLKPLLSVEQINHRLDAVEELAGN-------------- 349
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
P Y + L+ + DI+R + RI + A + +A+ ++
Sbjct: 350 ----------PLLRYDIRDWLSEV---RDIERLVGRIVYGNANARDLVALKKS------- 389
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE----AADQGD 601
L R+ + K + +LK + +S + I + AK++ E + +G
Sbjct: 390 ---LDAVPSIRDCLLEKA-GAEMLKGIAEGLASFSEIEELAKMIGNAIVEEPPVSVREGG 445
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
+ I +G E+ R ++K+ + + + + G+++L+ + IE+
Sbjct: 446 M-----IKSGFSEELDELRDISSNSKQWIAAFQQKEKDRTGIKSLKIGYNKVFGYYIEVT 500
Query: 662 -ANF-KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
AN +VP ++ + + R+ +PE+ + AN++ + + + +
Sbjct: 501 NANSSQVPDDYIRKQTMANAERFFTPELKEKESLILTANDKAVALEYEIFTEITETLSAH 560
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN 779
E Q + + LD L LA ++ N N+ RP +D +I I GRHPV+++ +
Sbjct: 561 SKELQETAERIGVLDVLADLAEVAENNNYTRPQLTED---CKILIRDGRHPVVESTVSGG 617
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
FVPNDT + + ++TGPNM GKS Y+RQ ALI IMAQ GSFVPAS A + V+D ++
Sbjct: 618 FVPNDTEMDCKENQFLLVTGPNMAGKSTYMRQTALIAIMAQAGSFVPASYASIGVIDQVF 677
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR+GA D + G+STF+ E+ E + IL N + +SLV++DE+GRGTST+DG +IA A +++
Sbjct: 678 TRIGAFDDLASGQSTFMVEMVELANILNNASPKSLVLLDEIGRGTSTYDGYSIAKAVVEF 737
Query: 900 LLEHKKCMV--LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLY 957
L K + LF THY ++ ++ K V YH++ + ++ +L
Sbjct: 738 LHNRGKVGIRALFATHYHQLTSLEEKLK-RVKNYHIAV-----------KEEGHELVFLR 785
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
K+VPG ++ S+G VA+LA +P I RA I +LE E
Sbjct: 786 KIVPGATDRSYGIHVARLAGVPEKVIERANEILRELERE 824
>gi|358448379|ref|ZP_09158883.1| DNA mismatch repair protein MutS [Marinobacter manganoxydans
MnI7-9]
gi|357227476|gb|EHJ05937.1| DNA mismatch repair protein MutS [Marinobacter manganoxydans
MnI7-9]
Length = 876
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 250/927 (26%), Positives = 412/927 (44%), Gaps = 138/927 (14%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL--- 136
S+ T K+TP+ QQ +++K ++P+ L+ +G + F EDA+ AA+++ I
Sbjct: 2 SAAQTDLSKHTPMMQQYLKIKGQHPNELVFYRMGDFYELFYEDAKKAAELMDITLTARGQ 61
Query: 137 --DHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY 194
+ A IP ++ RLV AG + + +Q A GP R + +
Sbjct: 62 SGGNPIPMAGIPYHSSEGYIARLVRAGQSIAICEQIGDPATSK------GPVERQVVRIV 115
Query: 195 TKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR--LGVVAVEI 252
T TL DD + R+ + ++ R G +++I
Sbjct: 116 TPGTLS------------------------DDAYLEDRRDNLLVAIYNHREQFGFASLDI 151
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECA 312
S+G E + L+ L L PAE+L+ + E +L + G +R +
Sbjct: 152 SSGRFAVSELEN---LEALQGELQRLRPAEILISEDFP--YEDVLEGFTG----IRRQGP 202
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQAL 372
L+E+ + ++ Q D+ G +N+ A L
Sbjct: 203 W---------------LFESDTARRVITHQLQVRDLTGFGCEE------LNLAVCAAGCL 241
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+ ++ L I L R + + L A + + LE+ N G +Y TL +M
Sbjct: 242 LQYAKETQRTALPHIRKLTRERRDEA----VILDAASRRNLEIDTNLMGGHQY-TLAWVM 296
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+ T T G R LRRW+ PL D ++ R AVS + + G H
Sbjct: 297 DRTATSMGGRELRRWLNRPLRDVEIVRQRQQAVSALLD-----------GFH-------- 337
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHID 552
Y + +L ++G DI+R + R+ R+A P + +A ++ A LQ+
Sbjct: 338 ------YEPVHDLLKAVG---DIERVLARVALRSARPRD-LARLRDAFQALPDLQE---- 383
Query: 553 GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISN 610
T K ++S + RL +IG+ +L + + D ++ +I
Sbjct: 384 -------TLKPVNSHHVVRL------ATIIGEYPELADLLERAIIDNPPVVIREGGVIRE 430
Query: 611 GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPL 668
G E+ R ++A + L + R + G+ L+ + V G I + + P+
Sbjct: 431 GFDEELDELRNISENAGQYLLDVETRERDRTGISTLKVGYNRVHGYYIEISRAQSDQAPV 490
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
++ + + K R+ +PE+ D+ A + +D L+ G A Q A Q
Sbjct: 491 DYIRRQTLKNAERFITPELKEFEDKALSAKSRALAREKGLYDDVLEAVAGQLAPLQDAAQ 550
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLH 788
ALA LD L A + + F P F E I GRHPV++ +L + FVPND +
Sbjct: 551 ALAELDVLSNFAERATSLRFSAPEF---SESPGFDIEEGRHPVVEQLLDEPFVPNDLLMD 607
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+R ++TGPNMGGKS Y+RQ ALI ++A GSFVPA+ A + +D I+TRMG+SD I
Sbjct: 608 TQRRML-VMTGPNMGGKSTYMRQAALIALLAYTGSFVPANRAVIGPVDRIFTRMGSSDDI 666
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
GRSTF+ E+ E + IL N T SLV++DE+GRGTST DG+++A+AT ++L +C
Sbjct: 667 AGGRSTFMVEMTETANILHNATEHSLVLMDEVGRGTSTFDGLSLAWATAEHLAREIRCYT 726
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ + + +V +LT+ ++ D + +L+ V G + S+
Sbjct: 727 LFATHYFELTQLADELQHAVNV----HLTA--------TEHDDSIVFLHNVHDGPASQSY 774
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEA 995
G +VA+LA +P I A + LE
Sbjct: 775 GLQVAKLAGVPQDVIRNAKTQLSHLEG 801
>gi|299144077|ref|ZP_07037157.1| DNA mismatch repair protein MutS [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518562|gb|EFI42301.1| DNA mismatch repair protein MutS [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 868
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 239/935 (25%), Positives = 439/935 (46%), Gaps = 137/935 (14%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----AHLDHNFMTASIPTFR 149
+Q +E+K K+ D +L +G + F EDA +A+K L I + N +P
Sbjct: 3 EQYLEIKKKHKDEILFFRLGDFYEMFFEDAIIASKELEITLTKRSSTGENTPMCGVPYHV 62
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDVGGG 208
+ ++ +L+N G+KV + Q E P A R ++ + T T +
Sbjct: 63 ADSYISKLINKGYKVAICDQME-------DPKLAKTIVKREVTKIVTPGTFTDFNYLKKD 115
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN---DG 265
E+ NYL+C V ++ N ++ D G E+ T + FN D
Sbjct: 116 EN------NYLLCTVINN-------NSIYLSYTDYSTG----ELYTTSKTFFNFNELLDF 158
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAE 325
F+ ++P+E+L+ + +K+ +L SN+ +
Sbjct: 159 FINECYR-----INPSEILINRIKNKKLNSIL-----TFSNLYINY-------------- 194
Query: 326 VMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA-VQALALTIRHLKQFGL 384
+ YE++ + +N E ++ N + IE + ++ ++ + I++L +
Sbjct: 195 IEDFYESIHDIEFTNEEISLIN----NNIFNDIENLKTTNKISDYSSIYILIKYLIKTQK 250
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
+ + L + S + L ++ + LE+++ + G++ +LL I++ T T GSR L
Sbjct: 251 DSLGHLNSIIYYNSDEY-LLLDESSKRNLELVKGINTGNKSQSLLEILDKTKTSMGSREL 309
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
++W+ PL + I+ R D ++E+ + + + + Y
Sbjct: 310 KKWIEEPLLNECAINDRFDKINELKRDLLLLDDLKLQLK-------------EIY----- 351
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
DI+R +I +RT TP E I+++ + L + K ++ + I +
Sbjct: 352 ---------DIERLSVKISNRTITPKEIISLLIS-LNSIKNIKNILISSD---------- 391
Query: 565 HSALLKRLILTASSPAVIGKAAKLLSTVNKEAAD---QGDLLNL---MIISNGQFSEVAR 618
+ L+K I ++ L+++ K AD +N+ I G +E+
Sbjct: 392 NLTLIK-----------IAESLDSLASIRKRIADIIIDDPPVNIDENRFIKTGYSTELDE 440
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNST 676
A + +E + SL + RK+ ++ L+ + + IE+ ++ +VP ++ + +
Sbjct: 441 LFAASEKGREWILSLEDKERKRTSIKGLKIKYNKILGYFIEVTKSYSNQVPKDYIRKQTL 500
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQALAALDC 735
+ RY S E+ +L + E + + S LKEF + Q + ++ LD
Sbjct: 501 VGSERYFSIELKEMESKLLSSKGEAFKLQMEIYKS-LKEFLANNIIQIQKVAKNISKLDV 559
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHAEREYC 794
L +L T++ + N+VRP ++ I I +GRHP+++ L + FVPNDT L
Sbjct: 560 LVSLCTVAIDNNYVRPSI---NKNGIIEIKNGRHPIVELKLQEELFVPNDTLLDTNNNLI 616
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS Y+RQVA+I IMA +GS+VP SA + ++D I+TR+GASD++ +G ST
Sbjct: 617 HIITGPNMAGKSTYMRQVAIIVIMAHMGSYVPCESANISLVDKIFTRIGASDNLAKGDST 676
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ E + I++N T SL+I+DE+GRGTST+DG++IA+A ++YL+ + LF THY
Sbjct: 677 FMVEMKEVANIVKNATKNSLIILDEVGRGTSTYDGLSIAWALVEYLVTNIHAKTLFATHY 736
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ ++ K+ ++ +S K + + +L K+V G S +S+G VA+
Sbjct: 737 HELVNLSNKY-NNINNLTISV-----------EKQNDSIVFLRKIVEGFSNNSYGIDVAK 784
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRD 1009
LA + I R+ I ++ ++N AK+D
Sbjct: 785 LAGINDFIIQRSNEILEFIQNNEDMNIKNNIAKKD 819
>gi|88858313|ref|ZP_01132955.1| DNA mismatch repair protein [Pseudoalteromonas tunicata D2]
gi|88819930|gb|EAR29743.1| DNA mismatch repair protein [Pseudoalteromonas tunicata D2]
Length = 859
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 258/938 (27%), Positives = 416/938 (44%), Gaps = 146/938 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAHLDHN----FMTAS 144
TP+ QQ + +K ++ D+LL +G + F +DA+ AA++L I H A
Sbjct: 15 TPMMQQYLRIKAEHRDILLFYRMGDFYELFFDDAKRAAQLLDISQTHRGRAGGAPIPMAG 74
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + ++ RLV G V + +Q A GP R + + T T+
Sbjct: 75 VPYHAVENYLARLVQMGESVAICEQIGDPATSK------GPVERKVVRIITPGTISDEAL 128
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ +D N L + + G FG + ++I++G + N
Sbjct: 129 LKERQD------NLLTAIY-------LAKEGTFGIAY--------LDINSGRFYLTQANT 167
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++L + PAELL P + ++ +Y G E D L
Sbjct: 168 ---EESCHSILQRIQPAELLY--PENFTAMHLISSYKGSRRRPEWEF---DLNTASTILC 219
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE-GIMNMPDLAVQALALTIRHLKQFG 383
+ + +G Q H + I G + Q +AL H+
Sbjct: 220 QQFETKDLIGFGV-------------QDAHEALIAAGCLMQYVKDTQRIALP--HINAIA 264
Query: 384 LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
LE+ + + L A T + LE L N +G TL +++ T T GSRL
Sbjct: 265 LEQ------------NELHVILDAATRKNLE-LTINLSGDIDNTLAQVLDKTATPMGSRL 311
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
L+R + P D N ++ARLDAVSEI + G + FY
Sbjct: 312 LKRRLHTPTRDHNELNARLDAVSEIM-NCGLFN--------------------DFY---- 346
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKT 563
VL +G DI+R + R+ R+A P + + A LQQLH+ +S
Sbjct: 347 DVLKQIG---DIERIVARLALRSARPRDLSRLRNA-------LQQLHLVQNLLAHTSSNR 396
Query: 564 LHSALLKRLILTASSPAVIGKAAKLLSTVNKE-----AADQGDLLNLMIISNGQFSEVAR 618
L +KR + AVI LL E D G +I+ G +E+
Sbjct: 397 LSD--IKR------ASAVIPHIQSLLEQAIIENPPVLIRDGG------VIAPGYHAELDE 442
Query: 619 ARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNST 676
R Q A + +++L R++ G+ L+ + V G + +VP + + +
Sbjct: 443 WRALSQGATDIVEALEAKERERTGIATLKIGYNRVHGFYIEVSRAYADQVPPEYIRRQTL 502
Query: 677 KKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCL 736
K RY PE+ D++ + + + + ++ + + +FQ +L+ LD +
Sbjct: 503 KNNERYIIPELKEHEDKVLGSQSKALALEKQLYEGLFDQLLPHLKQFQQLAASLSELDVI 562
Query: 737 HALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQI 796
+ A + N+ RP +D+ + I I GRHPV++ ++ + F+ N T+L R+ I
Sbjct: 563 NNFAERAETLNYCRPTLIDNQD---ITIVEGRHPVVEHVMSEPFIANPTHLAPTRKML-I 618
Query: 797 ITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFL 856
ITGPNMGGKS Y+RQ ALI ++A VG FVPAS A + ++D I+TR+GASD + GRSTF+
Sbjct: 619 ITGPNMGGKSTYMRQTALIVLLAHVGCFVPASQANIGIVDRIFTRIGASDDLASGRSTFM 678
Query: 857 EELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPK 916
E+ E + IL N T SLV++DE+GRGTST+DG+++A+AT +YL LF THY +
Sbjct: 679 VEMTETANILNNATQHSLVLMDEIGRGTSTYDGLSLAWATAEYLAHKISAKTLFATHYFE 738
Query: 917 IADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQL 975
+ ++ + G V + +D+ D + + + V+ G + SFG +VA L
Sbjct: 739 LTELAEQVPGLVNVH-------------LDAIEHNDTIAFKHTVLDGPASKSFGLQVAAL 785
Query: 976 AQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVK 1013
A +P S I +A KL ++ N S + DLL +
Sbjct: 786 AGVPKSVIKQAK---QKLRLLEQHQLVNNSGQFDLLTQ 820
>gi|427813874|ref|ZP_18980938.1| mismatch repair protein [Bordetella bronchiseptica 1289]
gi|410564874|emb|CCN22422.1| mismatch repair protein [Bordetella bronchiseptica 1289]
Length = 865
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 266/923 (28%), Positives = 415/923 (44%), Gaps = 145/923 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTASIPTF 148
QQ + LK + +LL +G + F EDAE AA++L + N A IP
Sbjct: 3 QQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERAARLLNLTLTKRGNSNGTPIPMAGIPVH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
+ ++ RLV G V + +Q + AA K GP R + + T TL +
Sbjct: 63 AMEQYLARLVALGESVAICEQIGDPAAAK-------GPVERRIVRIVTPGTLTDEALLPA 115
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
D + VCV GK ++R G+ + +++G E G
Sbjct: 116 KAD----RALAAVCVT------GK---------RELRAGLAWLNLASGAFHVTECAPG-- 154
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE+ L ++PAEL+ Q E L A + RV F GA A+++
Sbjct: 155 --QLESELHRIAPAELI-------QAESAELHMAFEGARTRVPDWH---FEADGARAQLL 202
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
+ ++ D+L + ++M +A+ + A + + + H++ ER
Sbjct: 203 AHFKT---DSLGGFDVEDMP--------AAVCSAGALLRYAARTQSQALAHVQTIAAER- 250
Query: 388 MCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRW 447
+ L T + LE L +G E TL +++ T GSRLLRRW
Sbjct: 251 -----------PGQYVLLDPVTRRNLE-LTQTLSGEESPTLFSLLDGCRTPMGSRLLRRW 298
Query: 448 VTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLT 507
+ HPL + + AR A++ + T+ G+ + +L ++
Sbjct: 299 LHHPLRENEPVLARQHAIATML-------TARLEGEQAFAAAG----------LLETLRD 341
Query: 508 SLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH-----IDGEYREKVTSK 562
+L PDI+R R+ R+ P E ++ A++ L LH + G R + +
Sbjct: 342 ALNAFPDIERIAARVALRSVRPRELASLRDALV----ALPALHASLAPLSGSPRARELAA 397
Query: 563 TLH-----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
L LL R + AS PAV + D G +I+ G SE+
Sbjct: 398 QLAMPPDIGELLARAV--ASEPAVAIR-------------DGG------VIAAGFDSELD 436
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNS 675
R + L L R++ G+ NL EF V G + KVP ++ + +
Sbjct: 437 ELRALATDGGDFLVQLEARERERTGIGNLRVEFNRVHGFYIEVSKGQTDKVPEDYRRRQT 496
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAW--DSFLKEFGGYYAEFQAAVQALAAL 733
K RY +PE+ T D++ A + + R W + L Y ALA L
Sbjct: 497 LKNAERYITPELKTWEDRVLSAQDR--SLAREKWLYEQLLDALAQYVRPLSQCASALAEL 554
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L ALA +R ++V P +D E I I +GRHPV++ + + F PN L R
Sbjct: 555 DTLAALAEHARRHDWVAPELIDGAE---IDIEAGRHPVVERAI-ERFTPNGCRLDQTRRM 610
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS Y+RQVALI ++A+ GSFVPA+ A + LD I+TR+GA+D + GRS
Sbjct: 611 L-LITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDRIFTRIGAADDLAGGRS 669
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL T SLV++DE+GRGTST+DG+A+A+A LL H + + LF TH
Sbjct: 670 TFMMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIAYRLLTHNRALTLFATH 729
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ T+ T +L + + G + +L++V G + S+G +VA
Sbjct: 730 YFEL----TRLPAEQPTAANVHLAAAESAG--------GIVFLHEVREGPASRSYGIQVA 777
Query: 974 QLAQLPPSCISRATVIAAKLEAE 996
Q A +P + I +A+ +LEA+
Sbjct: 778 QRAGVPAAVIRQASRELERLEAQ 800
>gi|78357019|ref|YP_388468.1| DNA mismatch repair protein MutS [Desulfovibrio alaskensis G20]
gi|90109846|sp|Q30ZX3.1|MUTS_DESDG RecName: Full=DNA mismatch repair protein MutS
gi|78219424|gb|ABB38773.1| DNA mismatch repair protein MutS [Desulfovibrio alaskensis G20]
Length = 904
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 275/1003 (27%), Positives = 444/1003 (44%), Gaps = 210/1003 (20%)
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLD 137
T+H+ K TP+ +Q + +K +YPD LL +G + F EDAE+AA+ L I + +
Sbjct: 2 TSHSPKLTPMFEQYMNIKAEYPDALLFYRMGDFYELFFEDAEVAARELQIALTCRNPNAE 61
Query: 138 HNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTK 196
+ +P ++ +LV+ G+KV + +Q E P +A G RG+ + T
Sbjct: 62 NKVPMCGVPHHSARSYISQLVDKGYKVAICEQMED-------PREAKGLVKRGVIRVLTS 114
Query: 197 ATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
T A ED E+ YL + D G G G V+ STG+
Sbjct: 115 GT--ALED----ENLSPKAHTYLGALCWDKSE---------GAG-----GFAWVDFSTGE 154
Query: 257 VVYGEFNDGFLRSGLEA--------VLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVR 308
SGL++ + ++P ELLL L+ PAS
Sbjct: 155 W-----------SGLQSRKEQELWQWVQKMAPRELLLADTLTP-----------PAS--- 189
Query: 309 VECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG--NHRSAIEGIMNMPD 366
L E Q VPE+ +++ + E IM+
Sbjct: 190 -----------------------------LELTETQFSKVPERAYFDYKRSAEKIMSAQQ 220
Query: 367 LA-------------VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQL 413
+A V+A + +L Q + + L F+ L+ + + L T + L
Sbjct: 221 VAELGALGLENRKELVRACGALLTYLSQTQKQDLNHL-CQFKPLNLNRHLLLDEITERNL 279
Query: 414 EVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMG 473
E+ R GTL H+++HT+T G RLL+ + HP ++ I
Sbjct: 280 ELFRRLDGRKGKGTLWHVLDHTVTPMGGRLLQERLKHPWREQAPID-------------- 325
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFI 533
T E+V N+ + Q L +V DI+R TRIF ATP +++
Sbjct: 326 --ETQEAVSHFFAHNT----LRRQLREALDTVY-------DIERLSTRIFLNRATPRDYV 372
Query: 534 AVMQAI--LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
A+ Q++ L A ++L + G+ R + L +AL P + + K
Sbjct: 373 ALRQSLKALPAVRELLEAPQTGDGRYATPEEQLGAAL----------PPFLHRMLKSWDD 422
Query: 592 VNKEAADQGDLLNLMIISNGQ--FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ AD DLL ++ N +E R+ A +EL L +L E
Sbjct: 423 L----ADYHDLLEKALVDNPPHVITEGGLFRQGFHPALDELMDLSEHGASKLHDLLAEVQ 478
Query: 650 SVSGITHL-----------IELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQ--L 694
+GI+ + E+P + ++P + + + RY S E L L++
Sbjct: 479 QTTGISKIKLGNNRVFGYYFEVPKSVSEELPDTFVRRQTLANAERYTS-ERLKELEEKLF 537
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV----QALAALDCLHALATLSRNKNFVR 750
+ A++ T+ + ++ + A+ + V LA LD LA +R+ N+VR
Sbjct: 538 SAADKRKTMELK-----LFQQLREHVAQARPRVLFMADLLATLDHWQGLAEAARHWNWVR 592
Query: 751 PVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
PV H+ I I GRHPV++ + F+PND + +R +ITGPNM GKS +
Sbjct: 593 PVL---HDGQDIVIREGRHPVVEAVQGPAGFIPNDLRIDDQRRLL-LITGPNMAGKSTVL 648
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
RQ A+I I+AQ+GSFVPA A + + D I++R+GASD++ QG+STF+ E+ E + ILR
Sbjct: 649 RQAAIICILAQIGSFVPAREARIGLCDRIFSRVGASDNLAQGQSTFMVEMMETARILRQA 708
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV--LFVTHYPKIADIKTKFTGS 927
T +SLVI+DE+GRGTST DG+A+A+A ++ L++ ++ + LF THY ++ T G+
Sbjct: 709 TRRSLVILDEIGRGTSTFDGLALAWAVVEELMKKQQAGIRTLFATHYHEL----TSLEGT 764
Query: 928 VGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
+ H + + G ++ +L ++VPG S+ S+G +VA+LA +P + + RA
Sbjct: 765 IPGVHNMNIAIKEWGG--------EIVFLRRLVPGPSDRSYGVEVAKLAGVPQNVVQRAR 816
Query: 988 VIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPE 1030
I LE + + R A EAQ +P PE
Sbjct: 817 QILELLEQKSKADGTRRPASY----------HEAQPLLPGMPE 849
>gi|354605089|ref|ZP_09023078.1| DNA mismatch repair protein mutS [Alistipes indistinctus YIT 12060]
gi|353347668|gb|EHB91944.1| DNA mismatch repair protein mutS [Alistipes indistinctus YIT 12060]
Length = 884
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 255/949 (26%), Positives = 425/949 (44%), Gaps = 171/949 (18%)
Query: 77 PTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL 136
P P+++ + + TPL +Q +K + D +L+ VG + FGEDA AK+LGI
Sbjct: 8 PAPAAKQKYVE--TPLMKQYYSVKAVHGDAILLFRVGDFYETFGEDAIKTAKILGITLTR 65
Query: 137 DHN-----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLS 191
N A P ++ ++ +LV AG +V V +Q E RG+
Sbjct: 66 RANGAASYVELAGFPYHAIDTYLPKLVRAGERVAVCEQLEDPKTTKK------IVKRGVI 119
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
L T + ++++ + E+ +L V FG GV ++
Sbjct: 120 ELVTPG-ISYSDNILANK-----ENTFLAAVY-------------FGKK---ATGVAFLD 157
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
STG+ E +G++ + +L +LSP E++ + ++ + A+ RV
Sbjct: 158 ASTGEFYAAEGTNGYV----DKLLSNLSPKEVIYSKGYEQEFTE---AFGSKYYTYRV-- 208
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG--IMNMPDLAV 369
D +ED + + S+++G I +P V
Sbjct: 209 ------------------------DDWMFSEDGAREKLQNQFQVSSLKGYGIDTLPGAVV 244
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
A A + + +F R AS + + + +++ LE+ +NS G E +L
Sbjct: 245 AAGA--VLYYLEFTEHRQTKHIASISRIDEDKFVWIDKFSIRNLELFASNS-GQEGCSLS 301
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ T + G R+LRRW++ PL I+ARLD V E
Sbjct: 302 EVLDRTASPMGGRMLRRWISLPLKSIEEINARLDLVGLFVE------------------- 342
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ-- 547
P+ L + +G D++R I+R+ +P E + + A LYA ++LQ
Sbjct: 343 -----RPELREALYESVALIG---DLERIISRVAVGRVSPREVVQLKNA-LYAVEKLQNT 393
Query: 548 --------------QLHIDGEYREKVTSKTLHSALLKRLILTASSPA-VIGKAAKLLSTV 592
QL + E R+K+ + S PA I K + S V
Sbjct: 394 MREAGHPALGALGEQLDLCLEVRDKIEREIY------------SDPANQIQKGGVIASGV 441
Query: 593 NKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMS 650
N E D R +AK+ L S+ + G+ +L+ F +
Sbjct: 442 NLELDD--------------------LRNISSNAKDILASIQQRESETTGIPSLKVAFNN 481
Query: 651 VSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
V G + KVP +W + + RY + E+ +++ A ++ + + +
Sbjct: 482 VFGYYIEVRNTHKDKVPADWIRKQTLTGAERYITAELKEYEEKILGAESKILAIEQEMYA 541
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+ L E + + Q +A LDCL A A S + + RP D I I GRHP
Sbjct: 542 ALLAELTRFVSPIQKDASLVARLDCLLAFAIQSVERRYCRPEVNDSQ---VIDIKDGRHP 598
Query: 771 VLDTILL--DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPAS 828
V++T++ + ++PND L + IITGPNM GKS +RQ ALI +MAQ+G FVPA
Sbjct: 599 VIETLMRVGEEYIPNDVYLDDSSQQVMIITGPNMSGKSAILRQTALIVLMAQMGCFVPAK 658
Query: 829 SAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHD 888
A++ V+D I+TR+GASD+I QG STF+ E+ E++ IL N + +SLV++DE+GRGTST+D
Sbjct: 659 EAKIGVVDKIFTRVGASDNISQGESTFMVEMLESASILNNISNRSLVLLDEIGRGTSTYD 718
Query: 889 GVAIAYATLDYLLEH--KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMD 946
G++IA+A ++Y+ +H + LF THY ++ +++ + V ++VS
Sbjct: 719 GISIAWAMVEYIHQHPSARAKTLFATHYHELNEMEELYE-RVKNFNVSV----------- 766
Query: 947 SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
+ ++ V +L K+V G +E SFG VA++A +P RA I A +E+
Sbjct: 767 KEINRKVIFLRKLVRGGTEHSFGIHVAKMAGMPGQITDRAERILADMES 815
>gi|261342180|ref|ZP_05970038.1| DNA mismatch repair protein MutS [Enterobacter cancerogenus ATCC
35316]
gi|288315513|gb|EFC54451.1| DNA mismatch repair protein MutS [Enterobacter cancerogenus ATCC
35316]
Length = 853
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 254/926 (27%), Positives = 412/926 (44%), Gaps = 156/926 (16%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ ++LK ++P++LL +G + F +DA+ A+++L I A A
Sbjct: 10 HTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMA 69
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
IP + ++ +LVN G V + +Q A GP R + + T T+
Sbjct: 70 GIPHHAVENYLAKLVNQGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEA 123
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ +D N L + D G GF G ++IS+G
Sbjct: 124 LLQERQD------NLLAALWQD------------GKGF----GYATLDISSG-------- 153
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L +P ++T L PA + E + I G
Sbjct: 154 ------------------RFRLSEPADRETMAAELQRTNPAELLYAEDFAETSLIEGRRG 195
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE-GIMNMPD--LAVQALALTIRHLK 380
L+E DT Q +++ Q R I G+ N P A L ++ +
Sbjct: 196 LRRRPLWE-FEIDTAR----QQLNL--QFGTRDLIGFGVENAPRGLCAAGCLLQYVKDTQ 248
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + + S + + A T + LE+ +N + G E TL ++++T+T G
Sbjct: 249 RTALPHIRSITMERQQDS----IIMDAATRRNLEITQNLAGGVE-NTLASVLDNTVTPMG 303
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SR+L+RW+ P+ D + + R ++ + + Y
Sbjct: 304 SRMLKRWLHMPIRDTHTLVCRQQTIAALQDR---------------------------YT 336
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH-----IDG-- 553
L VL +G D++R + R+ RTA P + +A M+ +A +QL +L ID
Sbjct: 337 ELQPVLRQVG---DLERILARLALRTARPRD-LARMR---HAFQQLPELRAQLSDIDSAP 389
Query: 554 --EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
+ RE + T LL+R I+ A P V+ + D G +I+ G
Sbjct: 390 VQKLRETMGEFTELRELLERAIIDA--PPVLVR-------------DGG------VIAPG 428
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLN 669
E+ R A + LD L R++LG+ L+ + +V G I + P++
Sbjct: 429 YNEELDEWRALADGATDYLDKLEIRERERLGLDTLKVGYNAVHGYFIQISRGQSHLAPIH 488
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + K RY PE+ D++ + + + + +D + + Q + A
Sbjct: 489 YVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDMLMPHLGDLQLSAGA 548
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHA 789
LA LD L LA + N+ P F+D +P I I GRHPV++ +L + F+ N NL
Sbjct: 549 LAELDVLVNLAERAETLNYTCPTFID--KP-GIRITEGRHPVVEQVLNEPFIANPLNLSP 605
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+R IITGPNMGGKS Y+RQ ALI ++A +GS+VPA E+ +D I+TR+GA+D +
Sbjct: 606 QRRML-IITGPNMGGKSTYMRQTALIALLAYIGSYVPAQHVEIGPIDRIFTRVGAADDLA 664
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A + L K M L
Sbjct: 665 SGRSTFMVEMTETANILHNATEHSLVLMDEVGRGTSTYDGLSLAWACAESLANKIKAMTL 724
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ + K G V H+ L + + +++ V G + S+G
Sbjct: 725 FATHYFELTQLPEKMEG-VANVHLDAL-----------EHGDTIAFMHSVQDGAASKSYG 772
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEA 995
VA LA +P I RA +LE+
Sbjct: 773 LAVAALAGVPKEVIKRARQKLRELES 798
>gi|398824368|ref|ZP_10582704.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. YR681]
gi|398224966|gb|EJN11252.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. YR681]
Length = 912
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 263/953 (27%), Positives = 439/953 (46%), Gaps = 175/953 (18%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
+ TP+ +Q +E+K + +LL +G + F EDAE+A+K LGI H +
Sbjct: 25 RVTPMMEQYLEIKAAHQGLLLFYRMGDFYELFFEDAEIASKTLGIVLTKRGKHQGADIPM 84
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+P R ++ RL++AG +V V +QTE A A G RG+ L T TL
Sbjct: 85 CGVPVERSEDYLHRLISAGHRVAVCEQTEDPA-AAKARGNKSVVRRGVVRLVTPGTLT-- 141
Query: 203 EDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
ED +NYL+ + + R GD R G+ ++IST +
Sbjct: 142 ------EDTLLDARANNYLLA-------IARARASGGGD----RFGLAWIDISTAEFTVL 184
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E + G L A L ++P E ++ L E PA V +RD F G
Sbjct: 185 ECSGG----ELAATLARINPNEAIVTDALYSDNELSQTLRELPA----VTPVTRDVFDGA 236
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A + + + ++G+ + L A A + ++
Sbjct: 237 TAEKRLCDYFAV-----------------------ATMDGLAQLTRLEATAAAAAVTYVD 273
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ + + L R SG+ M + T LE+ R + G G+LL ++ T+T G
Sbjct: 274 RTQVGKHPPLSPPAREASGAT-MAIDPATRANLELTRTLA-GERRGSLLDAIDCTVTSAG 331
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLL + + PL D I+ RLDAVS ++S + D
Sbjct: 332 SRLLAQRLAAPLTDAPAIARRLDAVSAF--------VADSAARED--------------- 368
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
+ S+L +PD+ R + R+ P + + I+ A + L +L GE +
Sbjct: 369 -IRSILRG---APDMSRALARLSVGRGGPRDLAGMRDGIIAADQVLARL---GELDQPPQ 421
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
+ A L+R P+ AA+ S ++++ +I +G F R
Sbjct: 422 EIAIVMAALQR-------PSR-ELAAEFASALDEQLP--------LIKRDGGF-----VR 460
Query: 621 KAVQSAKEELDSLINMCR-----------KQLGMRNLEFMSVSGITHLIELPANFKVPLN 669
+ + A +E SL + R Q G++ L+ + + + +E+ A L
Sbjct: 461 QGYEPALDETRSLRDASRLVVASMQARYADQTGVKGLKIRHNNVLGYFVEVTAQHGDKLM 520
Query: 670 WAKVNST---KKT----IRYHSPEVLTALDQLALANE-----ELTI---VCRAAWDSFLK 714
A +N+T ++T +R+ + E+ ++A A + EL I +C A D
Sbjct: 521 SAPLNATFIHRQTLAGQVRFTTSELGEIEAKIANAGDRALGLELEIFERLCAKALD---- 576
Query: 715 EFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
+ +AA Q A LD +LA L+ ++N+VRP + E + I +GRHPV++
Sbjct: 577 ----ISDDLRAAAQGFALLDVATSLAKLAVDENYVRP---EVDESLGFAIEAGRHPVVEQ 629
Query: 775 ILLDN---FVPNDTNLH---AERE-YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPA 827
L N F+ N +L A++ ++TGPNM GKS ++RQ ALI ++AQ+GSFVPA
Sbjct: 630 ALKRNGEPFIANACDLSPGPAQKSGQLWLLTGPNMAGKSTFLRQNALIALLAQIGSFVPA 689
Query: 828 SSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTH 887
+ A + ++D +++R+GA+D + +GRSTF+ E+ E + IL ++LVI+DE+GRGT+T
Sbjct: 690 TRARIGIIDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGERALVILDEIGRGTATF 749
Query: 888 DGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTK----FTGSVGTYHVSYLTSHKVMG 943
DG++IA+A +++L E +C LF THY ++ + K F +V
Sbjct: 750 DGLSIAWAAIEHLHESNRCRTLFATHYHELTALSAKLPRMFNATVRV------------- 796
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ +V +L++V+PG ++ S+G +VA+LA LPP+ I+RA + +KLEA+
Sbjct: 797 ---KEWQGNVVFLHEVLPGSADRSYGIQVAKLAGLPPAVITRAKSVLSKLEAQ 846
>gi|410472121|ref|YP_006895402.1| mismatch repair protein [Bordetella parapertussis Bpp5]
gi|408442231|emb|CCJ48753.1| mismatch repair protein [Bordetella parapertussis Bpp5]
Length = 865
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 264/921 (28%), Positives = 412/921 (44%), Gaps = 141/921 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTASIPTF 148
QQ + LK + +LL +G + F EDAE AA++L + N A IP
Sbjct: 3 QQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERAARLLNLTLTKRGNSNGTPIPMAGIPVH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
+ ++ RLV G V + +Q + AA K GP R + + T TL +
Sbjct: 63 AMEQYLARLVALGESVAICEQIGDPAAAK-------GPVERRIVRIVTPGTLTDEALLPA 115
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
D + VCV GK + R G+ + +++G E G L
Sbjct: 116 KAD----RALAAVCVT------GK---------REPRAGLAWLNLASGAFHVTECAPGQL 156
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
S L + +PAEL+ Q E L A + RV F GA A+++
Sbjct: 157 ESELHRI----APAELI-------QAESAELHMAFEGARTRVPDWH---FEADGARAQLL 202
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
+ ++ D+L + ++M +A+ + A + + + H++ ER
Sbjct: 203 AHFKT---DSLGGFDVEDMP--------AAVCAAGALLRYAARTQSQALAHVQTIAAER- 250
Query: 388 MCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRW 447
+ L T + LE L +G E TL +++ T GSRLLRRW
Sbjct: 251 -----------PGQYVLLDPVTRRNLE-LTQTLSGEESPTLFSLLDGCRTPMGSRLLRRW 298
Query: 448 VTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLT 507
+ HPL + + AR A++ + T+ G+ + +L ++
Sbjct: 299 LHHPLRENEPVLARQHAIATML-------TARQEGEQAFAAAG----------LLETLRD 341
Query: 508 SLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH-----IDGEYREKVTSK 562
+L PDI+R R+ R+ P E ++ A++ L LH + G R + +
Sbjct: 342 ALNAFPDIERIAARVALRSVRPRELASLRDALV----ALPALHASLAPLSGSPRARELAA 397
Query: 563 TLH-----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
L LL R + AS PAV + D G +I+ G SE+
Sbjct: 398 QLAMPPDIGELLARAV--ASEPAVAIR-------------DGG------VIAAGFDSELD 436
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNS 675
R + L L R++ G+ NL EF V G + KVP ++ + +
Sbjct: 437 ELRALATDGGDFLVQLEARERERTGIGNLRIEFNRVHGFYIEVSKGQTDKVPEDYRRRQT 496
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
K RY +PE+ T D++ A + + ++ L Y ALA LD
Sbjct: 497 LKNAERYITPELKTWEDRVLSAQDRSLAREKWLYEQLLDALAQYVRPLSQCASALAELDT 556
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
L ALA +R ++V P +D E I I +GRHPV++ + + F PN L R
Sbjct: 557 LAALAEHARRHDWVAPELIDGAE---IDIEAGRHPVVERAI-ERFTPNGCRLDQTRRIL- 611
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNMGGKS Y+RQVALI ++A+ GSFVPA+ A + LD I+TR+GA+D + GRSTF
Sbjct: 612 LITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDRIFTRIGAADDLAGGRSTF 671
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
+ E+ EA+ IL T SLV++DE+GRGTST+DG+A+A+A LL H + + LF THY
Sbjct: 672 MMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIAYRLLTHNRALTLFATHYF 731
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ T+ T +L + + G + +L++V G + S+G +VAQ
Sbjct: 732 EL----TRLPAEQPTAANVHLAAAESAG--------GIVFLHEVREGPASRSYGIQVAQR 779
Query: 976 AQLPPSCISRATVIAAKLEAE 996
A +P + I +A+ +LEA+
Sbjct: 780 AGVPAAVIRQASRELERLEAQ 800
>gi|403057436|ref|YP_006645653.1| DNA mismatch repair protein MutS [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804762|gb|AFR02400.1| DNA mismatch repair protein MutS [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 840
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 260/934 (27%), Positives = 407/934 (43%), Gaps = 184/934 (19%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTASIPTF 148
QQ LK ++P++LL +G + F +DA+ A+++L I A A +P
Sbjct: 3 QQYFRLKAEHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
+ ++ RLV G V + +Q A GP R + + T T+ +
Sbjct: 63 AVENYLARLVQMGESVAICEQVGDPATSK------GPVERKVVRIVTPGTISDEALLQEK 116
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D N L + D G GF G ++IS+G E +D R
Sbjct: 117 QD------NLLAAIWQD------------GRGF----GYATLDISSGRFRVSEPDD---R 151
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMS 328
+ A L +PAELL + E M
Sbjct: 152 ETMAAELQRTNPAELLYPESF-----------------------------------ESMD 176
Query: 329 LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI--RHLKQFGLER 386
L EN G R + PD A Q L L R L FG+E+
Sbjct: 177 LIEN-----------------RHGLRRRPLWEFE--PDTARQQLNLQFGTRDLTGFGVEQ 217
Query: 387 IM-------CL--------GASFRSLSG-SME-----MTLSANTLQQLEVLRNNSNGSEY 425
CL S + G +ME + + A T + LE+ +N S G E
Sbjct: 218 AKLALRAAGCLLQYAKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQNLSGGVE- 276
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
TL +++ T+T GSR+L+RW+ P D + + R A+S +
Sbjct: 277 NTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQAISAL----------------- 319
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
D+T P L L +G D++R + R+ RTA P + + A
Sbjct: 320 ---QDIT---PD----LQPYLRQVG---DLERILARLALRTARPRDLARMRHA------- 359
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL-- 603
QQ + RE++ L + ++RL+ ++IG+ +L + + + +L
Sbjct: 360 FQQF---PDIREQLAP--LDTDSVRRLV------SLIGQFDELRDLLERAVVEAPPVLVR 408
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELP 661
+ +I+ G +E+ R A + LD L R++LG+ L+ F V G +
Sbjct: 409 DGGVIAPGYHAELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRG 468
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+ VP+++ + + K RY PE+ D++ + + + +A +D + A
Sbjct: 469 QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYDELFDLLLPHLA 528
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E Q + ALA LD L LA + N+V P D +P I I GRHPV++ +L + F+
Sbjct: 529 ELQQSAAALAELDVLTNLAERADTLNYVCPTLSD--KP-GIKITGGRHPVVEQVLREPFI 585
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
N +L +R IITGPNMGGKS Y+RQ ALI +MA +G FVPA A + +D I+TR
Sbjct: 586 SNPLSLAPQRRML-IITGPNMGGKSTYMRQAALIVLMAHIGCFVPADQAVIGPVDRIFTR 644
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A + L
Sbjct: 645 VGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLA 704
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVV 960
K M LF THY ++ + K G V + +D++ D + +++ V
Sbjct: 705 NRIKAMTLFATHYFELTTLPEKMEGVVNVH-------------LDAREHGDTIAFMHSVQ 751
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
G + S+G VA LA +P I RA +LE
Sbjct: 752 DGAASKSYGLAVAALAGVPKEVIKRARQKLKELE 785
>gi|163857783|ref|YP_001632081.1| DNA mismatch repair protein MutS [Bordetella petrii DSM 12804]
gi|163261511|emb|CAP43813.1| mismatch repair protein [Bordetella petrii]
Length = 906
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 266/959 (27%), Positives = 426/959 (44%), Gaps = 154/959 (16%)
Query: 70 PHTLNPIPTPSSQTTHNKK---------------YTPLEQQVVELKTKYPDVLLMIEVGY 114
P NP P S Q HN +TP+ QQ + LK + +LL +G
Sbjct: 5 PRLTNPFPM-SKQRAHNHNAGVEARSPSTENLAGHTPMMQQYLRLKAEAGPLLLFYRMGD 63
Query: 115 KFRFFGEDAEMAAKVLGIY-----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQ 169
+ F EDAE AA++LG+ A A +P + ++ RLV G V + +Q
Sbjct: 64 FYEMFYEDAERAARLLGLTLTKRGASNGTPIPMAGVPVHAMEQYLARLVALGESVAICEQ 123
Query: 170 T-ETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN 228
+ AA K GP R + + T TL ++ + D
Sbjct: 124 IGDPAAAK-------GPVERRIVRIVTPGTL----------------TDEALLPAKADRA 160
Query: 229 VGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP 288
+ + G G + R G+ + +++G+ E + S L V +PAEL+ +
Sbjct: 161 LAAVFLG--GKARNPRAGLAWLNLASGEFRVTECAPAQIESELHRV----APAELVCAE- 213
Query: 289 LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
+ LA+ G + V F GA A +++ ++ DTL+ + +M
Sbjct: 214 ----SADPALAFEGARTRV-----PDWHFESDGARAHLLAHFKT---DTLAGFDVDDMP- 260
Query: 349 PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSAN 408
+AI + A + + T+ H++ ++R + +
Sbjct: 261 -------AAICAAGALLRYAARTQSQTLAHVQGIAVDR------------PGQYVLMDPV 301
Query: 409 TLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI 468
T + LE L +G E TL +++ T GSRLLRRW+ HPL D AR A+S +
Sbjct: 302 TRRNLE-LTQTLSGEESPTLFSLLDGCRTPMGSRLLRRWLHHPLRDNAPALARQQAISAL 360
Query: 469 AESMGSYRTSESVGQHDEKNSDVTIVEPQFYY--ILSSVLTSLGRSPDIQRGITRIFHRT 526
G+ D V P F +L ++ +L PD++R +R+ R+
Sbjct: 361 L-----------AGRTD--------VAPAFGAAGLLETLRDALDAFPDVERISSRLALRS 401
Query: 527 ATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH-------SALLKRLILTASSP 579
P E +A ++ L A L++L ++ H + LL+R I A P
Sbjct: 402 VRPRE-LASLRDALAALPALRELVAPLSASPRLAELAGHLQLDPALADLLRRAI--AQEP 458
Query: 580 AVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRK 639
AV + +++T D+ L + G F AR+ R+
Sbjct: 459 AVAIRDGGVIATGFDAELDE---LRALAADGGDFLVQLEARE----------------RE 499
Query: 640 QLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
+ G+ NL EF V G + KVP ++ + + K RY +PE+ + D++ A
Sbjct: 500 RTGIGNLRVEFNRVHGFYIEVTKGQTDKVPEDYRRRQTLKNAERYITPELKSWEDKVLSA 559
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
+ + ++ L + ALA LD L ALA +R ++ P D
Sbjct: 560 QDRSLAREKWLYEQLLDTLAEHVRPLSDCAGALAELDTLAALAEHARRHDWTAPELTDQA 619
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
E + I +GRHPV++ + + F PN L A R +ITGPNMGGKS Y+RQVALI +
Sbjct: 620 E---LDIEAGRHPVVERAI-ERFTPNGCRLDATRRML-LITGPNMGGKSTYMRQVALIAL 674
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
+A+ GSFVPA A + LD I+TR+GA+D + GRSTF+ E+ EA+ IL T SLV++
Sbjct: 675 LARTGSFVPAQRATIGKLDRIFTRIGAADDLAGGRSTFMMEMTEAAAILAASTPHSLVLM 734
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
DE+GRGTST+DG+A+A+A L+ H + + LF THY ++ T+ T ++L
Sbjct: 735 DEIGRGTSTYDGLALAWAIALRLVTHNRALTLFATHYFEL----TRLPAEQPTAANAHLA 790
Query: 938 SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ + G + +L++V G + S+G +VAQ A +P + I A+ +LEA+
Sbjct: 791 AAESAG--------GIVFLHEVRDGPASRSYGIQVAQRAGVPAAVIRHASRELERLEAQ 841
>gi|172061043|ref|YP_001808695.1| DNA mismatch repair protein MutS [Burkholderia ambifaria MC40-6]
gi|238689171|sp|B1YSP3.1|MUTS_BURA4 RecName: Full=DNA mismatch repair protein MutS
gi|171993560|gb|ACB64479.1| DNA mismatch repair protein MutS [Burkholderia ambifaria MC40-6]
Length = 885
Score = 266 bits (680), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 252/926 (27%), Positives = 410/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K +PD L+ +G + F EDAE AA++L + A A
Sbjct: 12 HTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G V + +Q A GP R + + T TL A
Sbjct: 72 GVPHHAVEQYLAKLVKMGESVAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D YL+ + G + GV V +G+ + +++G + E
Sbjct: 126 LLSDKND------VYLLAMC-----TGHNKRGVA-----VNIGLAWLNLASGALRLAEIE 169
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 170 PDQLGAALERI----RPAEILTADGATDTVP------AGAGAIKRVPAWHFDIASGTQRL 219
Query: 324 AEVMSL--YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ + + + G +L+ SA + A +RH++
Sbjct: 220 CDQLDVAGLDGFGAHSLT----------------SACGAAGALLLYAAATQGQQLRHVRS 263
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+E + + + L T + LE L G+E TL +++ T GS
Sbjct: 264 LKVE------------NETEYIGLDPATRRNLE-LTETLRGTESPTLYSLLDTCCTTMGS 310
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLR W+ HP S+ + +++G + +D +
Sbjct: 311 RLLRHWLHHP----------------PRASVAAQSRQQAIGALLDAPADAS--------- 345
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L ++ ++L + D++R R+ +A P + ++ L L RE++++
Sbjct: 346 LDALRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERISA 395
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLL-STVNKEAA----DQGDLLNLMIISNGQFSEV 616
++ L R+ + PA + LL S + E A D G +I+ G +E+
Sbjct: 396 IVANADALTRVDAALAPPA---ECLDLLTSAIAPEPAAMVRDGG------VIARGYDAEL 446
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 447 DELRDISENCGQFLIDLEARERTRTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 506
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + E Q ALA LD
Sbjct: 507 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPFIPECQRVASALAELD 566
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND AER+
Sbjct: 567 VLAAFAERARTLDWVAPTFTDE---IGIEIEQGRHPVVEA-QVEQFIANDCRFGAERKLL 622
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA SA +D I+TR+GA+D + GRST
Sbjct: 623 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRST 681
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL C LF THY
Sbjct: 682 FMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAQNGCYTLFATHY 741
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 742 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVNEGPANQSYGLQVAQ 789
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 790 LAGVPAPVIRAARKHLAYLEQQSATQ 815
>gi|452205388|ref|YP_007485517.1| DNA mismatch repair protein MutS [Dehalococcoides mccartyi BTF08]
gi|452112444|gb|AGG08175.1| DNA mismatch repair protein MutS [Dehalococcoides mccartyi BTF08]
Length = 858
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 271/955 (28%), Positives = 446/955 (46%), Gaps = 165/955 (17%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFM-------T 142
TPL +Q +++K YP+ ++ +G + F EDA +AA+ L I L M
Sbjct: 5 TPLRKQYLDIKKNYPEAIVFFRLGDFYETFEEDARIAARELEIV--LTSREMGKGLKVPL 62
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
A IP L+ ++ RL+N G+KV + +Q PG+ G R ++ L T T+
Sbjct: 63 AGIPYHALDNYLSRLINKGYKVAICEQVTK-------PGETKGLVQRQVTRLVTPGTVVE 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ ++ N+L+ + + + G F D IST + +
Sbjct: 116 PNLLQTKQN------NFLLSLYLTEDSCGL----AFAD------------ISTSEFGCTQ 153
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N G LEA + LSPAE++L + Q+ + + +++ + D +
Sbjct: 154 TNIG----ELEAEISRLSPAEIILPK---NQSLNLPI-------HLKATISKLDGYYFEA 199
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+A E L + E QN+ NMP LA+ A + +L++
Sbjct: 200 DIAR---------EHLLRHFECQNLSA----------YSCENMP-LAISAAGALLNYLEE 239
Query: 382 FG------LERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
LER+ S + + M+M ++TL LE+ R++ S G+LL I++ T
Sbjct: 240 TQKSSLKQLERL-----SVYTTADYMQM--DSHTLSNLEIFRSSGGNSLKGSLLGILDQT 292
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
T G RLLR+++ PL ++ I RL AV Y ES+ +
Sbjct: 293 RTAMGGRLLRKFLGQPLLKQSDIEKRLSAVD--------YFFEESLAR------------ 332
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
+S+ SLG+ D++R RI +T P E I++ ++
Sbjct: 333 -------TSLAKSLGQIADMERMANRIRQKTILPRELISLKNSL---------------- 369
Query: 556 REKVTSKTLHSALLK--RL--ILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIIS 609
E V++ L+ RL L P ++L +NK D L + +I
Sbjct: 370 -ETVSAIHRQFGLMPPPRLAYFLNGLKPL-----PEMLDIINKTITDDPPSTLGDGKVIR 423
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVP 667
G E+ + A+ L + R++ G+++L+ + IE+ AN +P
Sbjct: 424 AGFDPEMDKLCSLAGDARTFLSQMETRERERTGIKSLKLGYNRVFGYYIEISNANLGDMP 483
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
+ + + R+ +P++ + + A E L + ++ L + GG+Y+ A
Sbjct: 484 PEFIRKQTLVNAERFITPKLKEYENLILNAKERLLEMETGLYEQVLNQLGGFYSALLANA 543
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTN 786
ALAALD L A A ++ ++VRPVF H ++ I GRHP+++ L +FV ND +
Sbjct: 544 AALAALDVLSAFAEVAVRNSYVRPVF---HPENRLDIRKGRHPMVEQGLGYGSFVANDIS 600
Query: 787 LHAEREYCQII--TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
L AE CQII TGPNM GKS Y++Q ALI +MAQ+GS+VPA +AEL + D I+TR+GA
Sbjct: 601 LSAED--CQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFTRIGA 658
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+ + G+STF+ E+ E + IL T++SL+I+DE+GRGTST+DG+AIA A ++Y+
Sbjct: 659 REDLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQP 718
Query: 905 K--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
LF THY ++ ++ SYL K S+ +V +L+K+VPG
Sbjct: 719 SLTAKTLFATHYHELVEL------------ASYLPRVKNYNIAVSEDRGEVVFLHKIVPG 766
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
+ S+G VA+LA LP I RA + +LE + ++R+ + L + ++ Q
Sbjct: 767 GVDKSYGIHVAKLAGLPKWVIKRAYEVLTELENPAKKQPKSRTCQPQLQLPMTGQ 821
>gi|167720301|ref|ZP_02403537.1| DNA mismatch repair protein [Burkholderia pseudomallei DM98]
Length = 939
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 256/927 (27%), Positives = 411/927 (44%), Gaps = 136/927 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 67 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 126
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 127 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 180
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 181 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 224
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 225 APDRLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 274
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 275 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 317
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 318 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 364
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 365 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 401
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 402 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 449
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 450 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 501
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 502 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 561
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 562 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 621
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L++ER+
Sbjct: 622 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNSERKL 677
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 678 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 736
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 737 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 796
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 797 YFELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 844
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
QLA +P I A A LE + +++
Sbjct: 845 QLAGVPAPVIRAARKHLAHLEQQSAAQ 871
>gi|33592656|ref|NP_880300.1| DNA mismatch repair protein MutS [Bordetella pertussis Tohama I]
gi|384203959|ref|YP_005589698.1| DNA mismatch repair protein MutS [Bordetella pertussis CS]
gi|44888183|sp|Q7VY01.1|MUTS_BORPE RecName: Full=DNA mismatch repair protein MutS
gi|33572302|emb|CAE41855.1| mismatch repair protein [Bordetella pertussis Tohama I]
gi|332382073|gb|AEE66920.1| DNA mismatch repair protein MutS [Bordetella pertussis CS]
Length = 883
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 270/935 (28%), Positives = 422/935 (45%), Gaps = 136/935 (14%)
Query: 78 TPSSQTTHNK--KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH 135
TP QTT + +TP+ QQ + LK + +LL +G + F EDAE AA++L +
Sbjct: 4 TPK-QTTGDALAGHTPMMQQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERAARLLNLTLT 62
Query: 136 LDHN-----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRG 189
N A IP + ++ RLV G V + +Q + AA K GP R
Sbjct: 63 KRGNSNGTPIPMAGIPVHAMEQYLARLVALGESVAICEQIGDPAAAK-------GPVERR 115
Query: 190 LSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
+ + T TL + D + VCV GK + R G+
Sbjct: 116 IVRIVTPGTLTDEALLPAKAD----RALAAVCVT------GK---------REPRAGLAW 156
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRV 309
+ +++G E + LE+ L ++PAEL+ Q E L A + RV
Sbjct: 157 LNLASGAFHVTECAP----AQLESELHRIAPAELI-------QAESAELHMAFEGARTRV 205
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
F GA A++++ ++ D+L + ++M +A+ + A
Sbjct: 206 PDWH---FEADGARAQLLAHFKT---DSLGGFDVEDMP--------AAVCAAGALLRYAA 251
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
+ + + H++ ER SG + L T + LE L +G E TL
Sbjct: 252 RTQSQALAHVQTIAAER-----------SGQY-VLLDPVTRRNLE-LTQTLSGEESPTLF 298
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ T GSRLLRRW+ HPL + + AR A++ + T+ G+ +
Sbjct: 299 SLLDGCRTPMGSRLLRRWLHHPLRENEPVLARQHAIATML-------TARQEGEQTFAAA 351
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
+L ++ +L PDI+R R+ R+ P E ++ A+ L
Sbjct: 352 G----------LLETLRDALNAFPDIERIAARVALRSVRPRELASLRDALAALPALHASL 401
Query: 550 H-IDGEYREKVTSKTLH-----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+ G R + + L LL R + AS PAV + D G
Sbjct: 402 TPLSGSPRARELAAQLAMPPDIGELLARAV--ASEPAVAIR-------------DGG--- 443
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELP 661
+I+ G SE+ R + L L R++ G+ NL EF V G +
Sbjct: 444 ---VIAAGFDSELDELRALATDGGDFLVQLEARERERTGIGNLRVEFNRVHGFYIEVTKG 500
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
KVP ++ + + K RY +PE+ T D++ A + + ++ L Y
Sbjct: 501 QTDKVPEDYRRRQTLKNAERYITPELKTWEDRVLSAQDRSLAREKWLYEQLLDALAQYVR 560
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
ALA LD L ALA +R ++V P +D E I I +GRHPV++ + + F
Sbjct: 561 PLSQCASALAELDTLAALAEHARRHDWVAPELIDGAE---IDIEAGRHPVVERAI-ERFT 616
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PN L R +ITGPNMGGKS Y+RQVALI ++A+ GSFVPA+ A + LD I+TR
Sbjct: 617 PNGCRLDQTRRML-LITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDRIFTR 675
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA+D + GRSTF+ E+ EA+ IL T SLV++DE+GRGTST+DG+A+A+A LL
Sbjct: 676 IGAADDLAGGRSTFMMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIAYRLL 735
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
H + + LF THY ++ T+ T +L + + G + +L++V
Sbjct: 736 THNRALTLFATHYFEL----TRLPAEQPTAANVHLAAAESAG--------GIVFLHEVRE 783
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G + S+G +VAQ A +P + I +A+ +LEA+
Sbjct: 784 GPASRSYGIQVAQRAGVPAAVIRQASRELERLEAQ 818
>gi|254297070|ref|ZP_04964523.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 406e]
gi|157806909|gb|EDO84079.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 406e]
Length = 1001
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 256/928 (27%), Positives = 410/928 (44%), Gaps = 136/928 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 130 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 189
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 190 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 243
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 244 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 287
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 288 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 337
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 338 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 380
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 381 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 427
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 428 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 464
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 465 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 512
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 513 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 564
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 565 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 624
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 625 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 684
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 685 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKL 740
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 741 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 799
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 800 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 859
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 860 YFELTQLPVEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 907
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSRV 1001
QLA +P I A A LE + +++
Sbjct: 908 QLAGVPAPVIRAARKHLAHLEQQSAAQA 935
>gi|402566124|ref|YP_006615469.1| DNA mismatch repair protein MutS [Burkholderia cepacia GG4]
gi|402247321|gb|AFQ47775.1| DNA mismatch repair protein MutS [Burkholderia cepacia GG4]
Length = 885
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 251/926 (27%), Positives = 406/926 (43%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K +PD L+ +G + F EDAE AA++L + A A
Sbjct: 12 HTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G V + +Q A GP R + + T TL A
Sbjct: 72 GVPHHAVEQYLAKLVKMGESVAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D YL+ + G + GV V +G+ + +++G + E
Sbjct: 126 LLSDKND------VYLLAMC-----TGHNKRGVA-----VNIGLAWLNLASGALRLAEIE 169
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 170 PDQLGAALERI----RPAEILTADGATDAVP------AGTGATKRVPAWHFDIASGTQRL 219
Query: 324 AEVMSL--YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ + + + G +L+ SA + A +RH++
Sbjct: 220 CDQLDVAGLDGFGAHSLT----------------SACGAAGALLLYAAATQGQQLRHVRS 263
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+E + + + L T + LE L G+E TL +++ T GS
Sbjct: 264 LKVE------------NETEYIGLDPATRRNLE-LTETLRGTESPTLYSLLDTCCTTMGS 310
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLR W+ HP SV + + ++E
Sbjct: 311 RLLRHWLHHP-------------------------PRASVAAQSRQQAIGALLEAPANAS 345
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L ++ ++L + D++R R+ +A P + ++ L L RE++++
Sbjct: 346 LDALRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERISA 395
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLL-STVNKEAA----DQGDLLNLMIISNGQFSEV 616
++ L R+ + PA + LL S + E A D G +I+ G +E+
Sbjct: 396 IVANADALTRVDAALAPPA---ECLDLLTSAIAPEPAAMVRDGG------VIARGYDAEL 446
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 447 DELRDISENCGQFLIDLEARERTRTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 506
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + E Q ALA LD
Sbjct: 507 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPFIPECQRVASALAELD 566
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND +ER+
Sbjct: 567 VLAAFAERARTLDWVAPAFTDE---IGIEIEQGRHPVVEA-QVEQFIANDCRFGSERKLL 622
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA SA +D I+TR+GA+D + GRST
Sbjct: 623 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRST 681
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL C LF THY
Sbjct: 682 FMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAQNGCYTLFATHY 741
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 742 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVNEGPANQSYGLQVAQ 789
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 790 LAGVPAPVIRAARKHLAYLEQQSATQ 815
>gi|115352175|ref|YP_774014.1| DNA mismatch repair protein MutS [Burkholderia ambifaria AMMD]
gi|123128122|sp|Q0BDU3.1|MUTS_BURCM RecName: Full=DNA mismatch repair protein MutS
gi|115282163|gb|ABI87680.1| DNA mismatch repair protein MutS [Burkholderia ambifaria AMMD]
Length = 886
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 252/926 (27%), Positives = 410/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K +PD L+ +G + F EDAE AA++L + A A
Sbjct: 12 HTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G V + +Q A GP R + + T TL A
Sbjct: 72 GVPHHAVEQYLAKLVKMGESVAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D YL+ + G + GV V +G+ + +++G + E
Sbjct: 126 LLSDKND------VYLLAMC-----TGHNKRGVA-----VNIGLAWLNLASGALRLAEIE 169
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 170 PDQLGTALERI----RPAEILTADGATDAVP------AGAGAIKRVPAWHFDIASGTQRL 219
Query: 324 AEVMSL--YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ + + + G +L+ SA + A +RH++
Sbjct: 220 CDQLDVAGLDGFGAHSLT----------------SACGAAGALLLYAAATQGQQLRHVRS 263
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+E + + + L T + LE L G+E TL +++ T GS
Sbjct: 264 LKVE------------NETEYIGLDPATRRNLE-LTETLRGTESPTLYSLLDTCCTTMGS 310
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLR W+ HP S+ + +++G + +D +
Sbjct: 311 RLLRHWLHHP----------------PRASVAAQSRQQAIGALLDAPADAS--------- 345
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L ++ ++L + D++R R+ +A P + ++ L L RE++++
Sbjct: 346 LDALRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERISA 395
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLL-STVNKEAA----DQGDLLNLMIISNGQFSEV 616
++ L R+ + PA + LL S + E A D G +I+ G +E+
Sbjct: 396 IVANADALTRVDAALAPPA---ECLDLLTSAIAPEPAAMVRDGG------VIARGYDAEL 446
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 447 DELRDISENCGQFLIDLEARERTRTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 506
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + E Q ALA LD
Sbjct: 507 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPFIPECQRVASALAELD 566
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND AER+
Sbjct: 567 VLAAFAERARTLDWVAPTFTDE---IGIEIEQGRHPVVEA-QVEQFIANDCRFGAERKLL 622
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA SA +D I+TR+GA+D + GRST
Sbjct: 623 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRST 681
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL C LF THY
Sbjct: 682 FMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAQNGCYTLFATHY 741
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 742 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVNEGPANQSYGLQVAQ 789
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 790 LAGVPAPVIRAARKHLAYLEQQSATQ 815
>gi|312872874|ref|ZP_07732936.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2062A-h1]
gi|311091608|gb|EFQ49990.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2062A-h1]
Length = 854
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 243/957 (25%), Positives = 429/957 (44%), Gaps = 161/957 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FM 141
+K TP+ +Q ++K +YPD L VG + F +DA AK+L + N
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRSNKSAKPIP 62
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
A +P ++ ++ LV+ G+KV + +Q E P KA G RG+ L T T+
Sbjct: 63 MAGVPHLAVDSYINTLVDKGYKVAICEQLE-------DPKKAQGMVKRGIIQLVTPGTV- 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
+ D ESNYL + G+ G+ ++STG
Sbjct: 115 ----INDNPDQAK-ESNYLTSLCSS------------SQGW----GLTYCDLSTG----- 148
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI-- 318
E+ L+ E+++ + LS QT +++ A + + F+
Sbjct: 149 -----------ESYATHLTSWEMIVNELLSLQTRELVYGEA--------LTSDKQIFLKK 189
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
G L++ + L + E + V +Q +++ I + + ++ H
Sbjct: 190 AGITLSQPVKLSKEHAEVSY---------VTQQLHNQLEIAATKQLLAYLLATQKRSLAH 240
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
L+ +S + + +S LE++++ G + G+L +++ T T
Sbjct: 241 LQ------------VTQSYEPNQYLQMSHIVQTNLELIKSAKTGKKMGSLFWLLDKTSTA 288
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
G RLL+ W+ PL + I +R V+ + +
Sbjct: 289 MGGRLLKSWIERPLISLSEIKSRQLVVTALFDD--------------------------- 321
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-----HIDG 553
Y+ ++ L D++R R+ +A E + + ++ + + L +
Sbjct: 322 YFSREKIIKQLQGVYDLERLTGRVALGSANARELLQLADSLAVVPEIINILANSKNEVLN 381
Query: 554 EYREKVTS-KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQ 612
+ +K+ K +H ++K ++ +P LST KE II G
Sbjct: 382 NFAQKIDPLKGIHDLIVKTIV---ENPP--------LST--KEGG---------IIKAGV 419
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLN- 669
S++ R R A+ + K+ L + N R++ G+ NL + IE+ ++K VPL+
Sbjct: 420 SSQLDRYRDAMMNGKKWLADMANSEREKTGINNLRVGYNKVFGYYIEVTNSYKDKVPLDR 479
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + RY + E+ + A + T + + + ++ Y Q +
Sbjct: 480 YMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQKLAKQ 539
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
L++LD L + LS N+V P F D I+I +GRHPV++ ++ D ++PND +
Sbjct: 540 LSSLDVLATFSLLSEQNNYVCPQFSQDSSA--INIVNGRHPVVEKVMSDEEYIPNDVKMD 597
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E+ +ITGPNM GKS Y+RQ+ALI IMAQ+G F+PA SA L + D I+TR+GA D +
Sbjct: 598 -EQTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFDKIFTRIGAGDDL 656
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
G+STF+ E++EA+ L N T +SL++ DE+GRGT+T+DG+A+A A + YL +
Sbjct: 657 ISGKSTFMVEMSEANIALNNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHDKVGAKT 716
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ D+ + + HV ++ + + +L+K++PG ++ S+
Sbjct: 717 LFATHYHELTDLDQEL-AHLKNIHVG-----------ATQENGHLIFLHKILPGAADQSY 764
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLL-----VKLSDQEQE 1020
G VAQLA LP + AT + +LE ++ + DL K+SD+EQ+
Sbjct: 765 GIHVAQLAGLPTKVLREATHMLKQLEKHSDNQAAFSDEQLDLFGSSDQHKMSDEEQD 821
>gi|330446962|ref|ZP_08310613.1| DNA mismatch repair protein MutS [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491153|dbj|GAA05110.1| DNA mismatch repair protein MutS [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 859
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 185/601 (30%), Positives = 309/601 (51%), Gaps = 79/601 (13%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ +N + G + TL +++ T T GSRLL+RW+ P+ D+ ++ RLDA
Sbjct: 268 LDAATRRNLELTQNLAGGYD-NTLASVLDQTATPMGSRLLKRWLHQPIRDQKQLNGRLDA 326
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
+ +S + ++ VL +G D++R + R+
Sbjct: 327 IEAFKDS-------------------------GMFVDVAGVLRHMG---DLERILARLAL 358
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSA-------LLKRLILTAS 577
R+A P + + A+ Y + + L + R ++ ++A LL+R I+ +
Sbjct: 359 RSARPRDLARMRTAMQYLPELAELLAEVPQAR--ISDLATYAAPMDELCELLERAIIE-N 415
Query: 578 SPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMC 637
P +I L N E + DL ++G ++ +A + + ++DSL
Sbjct: 416 PPVIIRDGGVLAPGYNAELDEWRDL------ADGA-TKFLEELEASERERHDIDSL---- 464
Query: 638 RKQLGMRNLE--FMSVS-GITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
++G + F+ VS G +HL VP ++ + + K RY PE+ D++
Sbjct: 465 --KVGFNQVHGFFIQVSRGQSHL--------VPSHYVRRQTLKNAERYIIPELKEHEDKV 514
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
+ + + + W+ + + + Q A AL+ LD L LA + + N+ RP +
Sbjct: 515 LNSKSKALALEKKLWEELFDQLLPHLEQLQNAASALSELDVLTNLAERADSLNYCRPELM 574
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
E I I +GRHPV++ +L + F+ N +LH +R IITGPNMGGKS Y+RQ AL
Sbjct: 575 ---EQTGIEITAGRHPVVEHVLSEPFIANPISLHQDRRML-IITGPNMGGKSTYMRQTAL 630
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
I +MA VGSFVPA + ++ LD I+TR+GASD + GRSTF+ E+ E + IL N T QSL
Sbjct: 631 IALMAHVGSFVPAEAVKIGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATQQSL 690
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVS 934
V++DE+GRGTST+DG+++A+A+ ++L + M LF THY ++ ++ + TG + H+
Sbjct: 691 VLMDEIGRGTSTYDGLSLAWASAEWLADKLSAMTLFATHYFELTELPSLLTG-LANVHLD 749
Query: 935 YLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ + ++ +++ V G + S+G VA LA +P S I RA + +LE
Sbjct: 750 AV-----------EHGDEIAFMHAVQEGAASKSYGLAVASLAGVPKSVIKRAKIKLQQLE 798
Query: 995 A 995
A
Sbjct: 799 A 799
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K+TP+ QQ +++K + PDVLL +G + F +DA+ A+++L I +
Sbjct: 7 EKHTPMMQQFLKIKAENPDVLLFYRMGDFYEMFFDDAKRASQLLDISLTKRGSTNGEPIP 66
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
A +P + ++ +LV G V + +Q A GP R + + T T+
Sbjct: 67 MAGVPYHAVEGYLAKLVQQGVSVAICEQIGDPAT------SKGPVERKVVRIVTPGTV 118
>gi|149926791|ref|ZP_01915050.1| DNA mismatch repair protein [Limnobacter sp. MED105]
gi|149824343|gb|EDM83561.1| DNA mismatch repair protein [Limnobacter sp. MED105]
Length = 858
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 262/928 (28%), Positives = 430/928 (46%), Gaps = 157/928 (16%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT-------ASIP 146
QQ + LK++YPD LL +G + F +DA++AA++L I L H + A +P
Sbjct: 3 QQYLTLKSEYPDKLLFYRMGDFYELFFDDAQLAAQLLRIT--LTHRGQSAGQPIPMAGVP 60
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG-KAGPFGRGLSALYTKATLEAAEDV 205
+ ++ +LV G V + +Q T PG GP R ++ + T TL + +
Sbjct: 61 FHAADQYLAKLVALGHSVAICEQVGT-------PGLTKGPMERKVARVVTPGTLTESTLL 113
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
E+ L+ + +DG GV + +S G + E + G
Sbjct: 114 PDQEN------KTLLSLYSEDGKY---------------WGVACLALSAGSIRLLECDSG 152
Query: 266 FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDC--FIGGGAL 323
L A L + AE+L+ Q ++ SN +C R F G A
Sbjct: 153 ----SLAAHLSRFNAAEVLVNNRTFAQQSQI-----TGGSN---QCIERPAWHFDAGFAQ 200
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQG--------NHRSAIEGIMNMPDLAVQALALT 375
+ + S+ + ++L + + + +P G H S IE ++ D+ V+
Sbjct: 201 SHLQSVLQAANLESLELH-NAKLAIPAMGAALQYAKETHLS-IETFKHVSDIQVE----- 253
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
H + F + L + R ++E+T E LR G TL +N T
Sbjct: 254 --HEQDF-----LVLDEAARR---NLELT---------ETLR----GESAPTLFSRLNRT 290
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
+ G+R LR+W+ PL D I AR + + ++G E
Sbjct: 291 GSGMGARRLRQWLLEPLRDIATIEARQKKIQHLLSTLGQ------------------APE 332
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--HI-D 552
P + +++ +L DI+R +R+ +TA P + +A+ ++ L A Q+ +L H D
Sbjct: 333 P----VCFNLVKTLRAMADIERISSRVAMQTAKPRDLLALRES-LQALPQVAELISHFGD 387
Query: 553 GEYREKVTSKTLHSALLKRLILT-ASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
+ + LL L+ A +P V+ + D G +I++G
Sbjct: 388 SAFETAQHAFQAPPELLAELMQALAENPPVLIR-------------DGG------VIADG 428
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLN 669
+E+ R + + L L R+ G+ NL EF V G + KVP +
Sbjct: 429 YHAELDELRNIQTGSGQFLIELEKQEREATGIANLKVEFNRVHGFYIEVSSAQADKVPAH 488
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTI-VCRAAWDSFLKEFGGYYAEFQAAVQ 728
+ + + K RY + E L A ++ AL+ ++ + + + +++ + G + Q +
Sbjct: 489 YIRRQTMKNAERYITEE-LKAFEEKALSAKDKALNLEKVIYENLMAWLGQFTPFLQRCAR 547
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLH 788
L+ LD + ALA ++ N+VRP V ++I GRHPVL+ + ++ F PND LH
Sbjct: 548 ELSELDAMAALAIVAFEANWVRPHMVPH---ALLNIQQGRHPVLE-VQVEQFTPNDCALH 603
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ + +ITGPNMGGKS Y+RQ ALI ++A +GSFVPA+SA++ VLD I+TR+GASD I
Sbjct: 604 PGK-HMALITGPNMGGKSTYMRQTALIALLAHMGSFVPAASAQIGVLDRIFTRIGASDDI 662
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMV 908
GRSTF+ E+ EA+ I+R T SLVI+DE+GRGTST DG+++A+ L +C+
Sbjct: 663 AGGRSTFMVEMTEAATIVRQATPSSLVIMDEIGRGTSTFDGLSLAWEIAKRLANTNRCLT 722
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY +I + + SV H+S T H+ + +L+++ G + S+
Sbjct: 723 LFATHYFEITALGHEL-DSVFNVHLSA-TEHQ----------GKLVFLHRIEAGPASQSY 770
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLEAE 996
G +VA+LA LP + A +LEAE
Sbjct: 771 GLQVAKLAGLPALVVKNAQKRLDQLEAE 798
>gi|225012278|ref|ZP_03702715.1| DNA mismatch repair protein MutS [Flavobacteria bacterium MS024-2A]
gi|225003833|gb|EEG41806.1| DNA mismatch repair protein MutS [Flavobacteria bacterium MS024-2A]
Length = 863
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 267/987 (27%), Positives = 439/987 (44%), Gaps = 163/987 (16%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K TPL +Q +K KYPD LL+ VG + FG DA AA +LGI A
Sbjct: 6 KETPLMKQYNRIKAKYPDALLLFRVGDFYETFGADAVKAAGILGIILTKRGAGSASEIEL 65
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A P LN ++ +LV AG +V + Q E + RG++ L T +
Sbjct: 66 AGFPHHSLNTYLPKLVKAGCRVAICDQLEDPKMTK------TIVKRGVTELITPG-VSLH 118
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+DV + + NYL V FD + GV ++ISTGD E
Sbjct: 119 DDVLDQK-----KHNYLAAV-----------------SFDKKWGVSFLDISTGDFWVAEG 156
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+ +E +L S +P+E+L+ +P +K+ L G + CF
Sbjct: 157 TE----EQIEQLLQSFAPSEVLVPKP----KKKLFLEQYGLQYH---------CFYMEDW 199
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALTIRHLKQ 381
E+ + E + +N ++EG + + + A + +L Q
Sbjct: 200 AFELGTAQEKLTTHFQTN----------------SLEGFGVQKYTVGISAAGAVLHYLTQ 243
Query: 382 FGLERIMCLGASFRSLSGSME--MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
++ + R L + E + L T + LE+ + S E L+ I++HT T
Sbjct: 244 AQHRKLQHIT---RILPIAQEGFVWLDRFTQRNLELFQ--STHPEGIPLISIIDHTQTAM 298
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G RLLRRW+ PL ++ I +R + V E E + Q+ E+
Sbjct: 299 GGRLLRRWLAFPLKEQQQIESRHEIVEAFIEQ-------EEISQYTEQA----------- 340
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
LS+++ DI+R + +I +P LY QLQ + E +K
Sbjct: 341 --LSNII-------DIERVMAKIATEKISPRA--------LY---QLQDSLSEVEGLKKQ 380
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA---ADQGDLLNLMIISNGQFSEV 616
K + + ++L +S A+I + + T++ EA +G +I+ G S++
Sbjct: 381 LEKGSNFTIKEQLKTISSCAAII---SLIQQTIHPEAPVLVSKGK-----VIAEGFSSDL 432
Query: 617 ARARKAVQSAKEELDSLIN--MCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ LD+++ R Q+ + F +V G + KVP +W +
Sbjct: 433 DALRGLRDQSQSHLDAMLERETERSQIPSLKIAFNNVFGYYIEVRNTHKDKVPEDWIRKQ 492
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ T ++ A + + + + + ++ + A+A D
Sbjct: 493 TLVNAERYITEELKTFETEILQAGDRIMALEQQLYAELIQHLQKDLEVLKQNANAVAQWD 552
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAERE 792
L A + N+ RP E + + RHPV++ L ++ ND L E +
Sbjct: 553 VLSCFAKTALKNNYCRPTLTQGTE---LELRGARHPVIEQQLPLGTPYIANDLELDRETQ 609
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
+ITGPNM GKS +RQ ALI ++AQ+GS+VPA+ A L V+D I+TR+GASD+I G
Sbjct: 610 QIMMITGPNMSGKSAILRQTALISLLAQLGSYVPATQATLGVVDKIFTRVGASDNISMGA 669
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK-KCMVLFV 911
STF+ E+NE + IL N + SLV++DE+GRGTST+DG++IA+A +YL EH + VLF
Sbjct: 670 STFMVEMNETASILNNISDHSLVLLDEIGRGTSTYDGISIAWAIAEYLHEHPFRPKVLFA 729
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ ++ +++ + ++VS ++ V +L K++PG S SFG
Sbjct: 730 THYHELNEMTQRYS-RIKNFNVSI-----------KEAKDSVLFLRKLIPGGSAHSFGIH 777
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPES 1031
VA++A +P + A LEA L K E++++EN+ + S
Sbjct: 778 VAKMAGMPQHVLRSAQDKLKVLEASHG------------LKKSEKAEKDSEENLQL---S 822
Query: 1032 FYLGRVEASEDLISAYRDLFLNLKFAT 1058
F+ + L+ A RD +L T
Sbjct: 823 FF----NLDDPLLEALRDEIKSLDIDT 845
>gi|403178118|ref|XP_003336563.2| hypothetical protein PGTG_17874 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375173346|gb|EFP92144.2| hypothetical protein PGTG_17874 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1135
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 249/887 (28%), Positives = 400/887 (45%), Gaps = 126/887 (14%)
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETA---------AIKAHGPGKAGPFGRGLSALYT 195
+P ++ + + + G+KVG V Q ETA ++ K P +G
Sbjct: 288 VPETSVDFWIAKFLAKGYKVGKVDQCETALGAEMRNKGSLPTSKYAKPPPQQKGSGKEIV 347
Query: 196 KATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTG 255
+ L + G DG + C++ I+ D V GV+ ++ +T
Sbjct: 348 RRELRSVVTSGTIVDGNILTDDSATCLL-------AIKESTNSD-LPV-FGVIIMDAATA 398
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS-NVRVECASR 314
+ F D R+ LE ++ P E+L EK L+ PA+ V AS
Sbjct: 399 EFNLTHFEDSANRTHLETIMSRFKPKEIL--------HEKSGLS---PATLRVLRNTASS 447
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
DC E + E + T E G + N +QAL
Sbjct: 448 DCTWTALKSDEFLEPDECVCRLTEL--------FQESGGQIPQVFQSFNNKLETMQALGG 499
Query: 375 TIRHLKQFGLERIMCLGASFRSLSG---SMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+ +LKQ L++ + + + + S M L T+ LE+L+ S+GSE LL +
Sbjct: 500 LLWYLKQLNLDKDLLTCKNVKEMDAFRCSRTMHLDGKTISDLELLQ--SDGSEESRLLKL 557
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
+N +T +G RL R W+ PL D + I ARLDAV D
Sbjct: 558 LNRCVTSFGKRLFRHWLCSPLQDGDAIRARLDAV------------------------DF 593
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
+ P F ++L PD++R I+R+ T F+ V++A +Q+L
Sbjct: 594 LMNNPSF----EEKFSTLSGLPDLERLISRVHAGACTVPNFLKVLKAFEKIYSTIQELR- 648
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
++ +T + LLK L+ + + + + T+N D+ +LL L G
Sbjct: 649 ------QLIDET-PAMLLKELMDALPDTDKLLQNLEDMFTLND---DRRELLPL----EG 694
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL--IELPANFKVPLN 669
+ A + + A++ L + + +K L ++ + + GI + I++ A K P N
Sbjct: 695 KDESYDMALEEEREAEKALKAELKAAKKLLKTDDVVYKDI-GIKDIYQIQVSAKVKAPSN 753
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY---YAEFQAA 726
W K++ TK RY+SP+ + +L A E+ + + D LK F + Y +
Sbjct: 754 WTKMSGTKDCARYYSPQSAQLVKKLKQAREKKSCALK---DFHLKVFLAFDENYLIWLQV 810
Query: 727 VQALAALDCLHALA--TLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVP 782
V+++A LDC+ +LA ++ + RP VD E + + + RHP T+ D+ F+
Sbjct: 811 VKSVAQLDCVLSLAKASIGLGETTCRPKIVDSDEAM-VKFVTLRHPC--TVGRDDSDFIS 867
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
ND ++ + ++TGPNM GKS +R + I+AQ+G +VPA SA + +D I TRM
Sbjct: 868 NDVSVGGDECRMILLTGPNMAGKSTLLRMTCVATILAQIGCYVPAESAVISPVDRICTRM 927
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD I STF E+++A IL+ T++SLVI+DELGRGTST DG AIA+A L L
Sbjct: 928 GASDHIFAHASTFKVEMDDARKILKEATSKSLVILDELGRGTSTFDGHAIAFAVLHRLAT 987
Query: 903 HKKCMVLFVTHYPKI-------ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
H C+ F THY + A+I TK+ + +V +T ++V +
Sbjct: 988 HSNCLGFFATHYSALTEDFRAHANIATKYMLT----NVDEVT-------------REVVF 1030
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
LYK+ GVS S+G VA++A +P + RA I+ K E E R +
Sbjct: 1031 LYKLSSGVSPRSYGPHVAKMAGIPSKIVQRAISISEKFEKETKDRTE 1077
>gi|336434947|ref|ZP_08614666.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
1_4_56FAA]
gi|336002355|gb|EGN32466.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
1_4_56FAA]
Length = 888
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 316/607 (52%), Gaps = 68/607 (11%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
M L ++T + LE+ + G+LL +++ T T G+R+LR+++ PL ++ I RL
Sbjct: 270 MMLDSSTRRNLELCETLREKQKRGSLLWVLDKTKTAMGARMLRKFIEQPLIEKQEILRRL 329
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV E+ +S S E + ++ LS V D++R ITRI
Sbjct: 330 DAVEELKQSAIS---REEIREY-----------------LSPVY-------DLERLITRI 362
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
+ TA P + A +AG I + + + S+LLK + A +
Sbjct: 363 TYGTANPRDLTA------FAGSLSMLPPI------RYLLEEMESSLLKDIY------AEL 404
Query: 583 GKAAKLLSTVNKEAADQGDLLNLM--IISNGQFSEVARARKAVQSAKEELDSLINMCRKQ 640
L + V AD+ L II +G EV R+A K+ L L R++
Sbjct: 405 DPLEDLCTLVQNAIADEPPLAMKEGGIIRDGYNEEVDTLRRAKSEGKDWLAKLEQDEREK 464
Query: 641 LGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALAN 698
G++ L + +E+ ++K VP + + + RY +PE+ D + A
Sbjct: 465 TGIKTLRIKYNKVFGYYLEVTNSYKELVPDYYTRKQTLANAERYITPELKELEDTILGAE 524
Query: 699 EELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHE 758
++L + + + Q +A+A+LD +LA ++ N+VRP +E
Sbjct: 525 DKLYALEYELYCTIRDTIAAEVKRIQTTAKAIASLDVFSSLALVAERNNYVRPKI---NE 581
Query: 759 PVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
+I I GRHPV++ ++ + F+ NDT L +++ IITGPNM GKS Y+RQ ALI +
Sbjct: 582 SGKIDIKDGRHPVVEQMIPNGTFICNDTLLDDKKQRVSIITGPNMAGKSTYMRQAALIVL 641
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MAQ+GSFVPA+ A++ ++D I+TR+GASD + G+STF+ E+ E + ILRN T++SL+I+
Sbjct: 642 MAQIGSFVPAAKADIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLIL 701
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSY 935
DE+GRGTST DG++IA+A ++Y+ + K LF THY ++ +++ K +V Y ++
Sbjct: 702 DEIGRGTSTFDGLSIAWAVVEYISDSKLLGAKTLFATHYHELTELEGKI-DNVNNYCIA- 759
Query: 936 LTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
+ K D D+ +L K+V G ++ S+G +VA+LA +P I RA I +L
Sbjct: 760 ---------VKEKGD-DIVFLRKIVKGGADKSYGIQVAKLAGVPDLVIDRAKEIVEELVN 809
Query: 996 E-VSSRV 1001
E ++ RV
Sbjct: 810 EDITIRV 816
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 38/205 (18%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDA-----EMAAKVLGIYAHLDHNFMTA 143
+TP+ Q+ +E K +Y D +L +G + F +DA E+ + G +
Sbjct: 7 FTPMMQKYLETKEQYKDCILFYRLGDFYEMFFDDAITVSRELEITLTGKSCGQEERAPMC 66
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAA 202
+P ++ ++ RLV G+KV + Q E P +A G R ++ + T T+ A
Sbjct: 67 GVPYHAVDGYLTRLVAKGYKVAICDQVE-------DPKQAKGLVKREVTRIVTPGTILDA 119
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ + ++NY++C+V D R GV +I+TGD E
Sbjct: 120 QAID------ETKNNYIMCIV------------YIAD----RYGVSVADITTGDYFVTEL 157
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQ 287
DG L+ + P+E++ +
Sbjct: 158 PDG---GKLKDEIYRFMPSEIICNE 179
>gi|46446855|ref|YP_008220.1| DNA mismatch repair protein MutS [Candidatus Protochlamydia
amoebophila UWE25]
gi|81697634|sp|Q6MBV4.1|MUTS_PARUW RecName: Full=DNA mismatch repair protein MutS
gi|46400496|emb|CAF23945.1| putative DNA mismatch repair protein mutS [Candidatus Protochlamydia
amoebophila UWE25]
Length = 858
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 254/959 (26%), Positives = 426/959 (44%), Gaps = 148/959 (15%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPT 147
K +P+ Q K D +L +G + F EDA + +K L + + IP
Sbjct: 24 KISPMMMQWHACKKMAGDAILFFRMGDFYEAFYEDAHLLSKELELTLTKRQEIPMSGIPF 83
Query: 148 FRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAAEDVG 206
++ +LV GF+V + +Q E P K G R + + + T+ + +
Sbjct: 84 HTSEGYIDKLVAKGFRVAIAEQIE-------DPKKTKGLVKREVVRVVSPGTVINSSLLS 136
Query: 207 GGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGF 266
+ N+ +V VG+I G+ ++++TG+ EF
Sbjct: 137 DKNN------NFFAALV----KVGQI------------FGLAFLDLTTGEYWVSEFTQ-- 172
Query: 267 LRSGLEAVLLSLSPAELLLGQPLSKQT----EKMLLAYAGPASNVRVECASRDCFIGGGA 322
L L L PAE L + ++ E+M Y+ + +
Sbjct: 173 -ERELLNELYRLHPAEFLTSEKFKEKHASLFEEMQQTYSFLVNTL--------------- 216
Query: 323 LAEVMSLYENMGEDTLSNN-EDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
E D L N+ + Q +D +AI + + + L L I+H++
Sbjct: 217 --EDWQFEHQQAHDFLINHFKVQRLDGFGLSGMVAAINAAGALLNYLQETLCLPIQHIQ- 273
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
S R S S M L T + LE+ + +GS TLL +++ T T G+
Sbjct: 274 -----------SIRCYSSSQFMMLDRMTQRNLELTHSLQDGSRRHTLLGVIDQTQTPMGA 322
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RL+ WV PL VSEI H +N ++ + +I
Sbjct: 323 RLMHHWVKQPLL----------KVSEI---------------HQRQNGIQALLNHE--HI 355
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
+ + + DI+R + ++ ATP + IA+ ++ K +
Sbjct: 356 VDQLQNLFLQIKDIERLMMKVSACYATPRDLIALH----FSFKPI--------------- 396
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKL--LSTVN---KEAADQGDLLNL---MIISNGQF 613
A +K L+L S + A KL LS +N A + L L G
Sbjct: 397 -----AFIKSLLLNIPSEWINEHAQKLDPLSKMNALISNAIVEEPPLRLGEGKTFRQGFH 451
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLNWA 671
E+ R+ +K + R++ G++ L+ + IE+ K+P ++
Sbjct: 452 RELDELREISHDSKAWMARYQTQIREETGIKTLKVGFNKMFGYFIEVSRGQIDKMPDHFI 511
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
+ + RY +PE+ ++ A E + + + E Y QALA
Sbjct: 512 RRQTLVNAERYITPELKEYESKVLTAEERINSIESELFHQLRLEVASYTKNVLEVAQALA 571
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAE 790
+DCL +L +++ + PV +DD + I GRHPV++T+ + F+PNDT L +
Sbjct: 572 KIDCLISLTNVAKKYCYTCPV-IDDSSILVIE--EGRHPVIETVCRHEKFIPNDTYLDDQ 628
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ITGPNM GKS Y+RQVALI I+AQ+GSFVPA+ A + ++D ++TR+GASD + +
Sbjct: 629 ANRLLLITGPNMAGKSTYLRQVALIVILAQIGSFVPAAKAHIGIIDKVFTRIGASDDLSR 688
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM--V 908
G+STF+ E+ E + IL N T+QSLVI+DE+GRGTST+DG++IA++ +YLL +K M
Sbjct: 689 GQSTFMVEMTETANILNNATSQSLVILDEIGRGTSTYDGISIAWSVAEYLLTTEKRMAKT 748
Query: 909 LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSF 968
LF THY ++ ++ K G+V Y+V+ ++D +T+L K++ G ++ S+
Sbjct: 749 LFATHYWELTKLEEKVPGAVN-YNVAV-----------HEADDHITFLRKIIKGGTDKSY 796
Query: 969 GFKVAQLAQLPPSCISRATVIAAKLE--AEVSSRVQNRSAKRDLLVKLSDQEQEAQENM 1025
G VA+LA LP + ++R+ I LE A S + +K+ ++ K+ + Q N+
Sbjct: 797 GIHVARLAGLPQAVLNRSKEILEHLEENANRKSAFEPTRSKKSMVSKVKVPSTDFQLNL 855
>gi|157130502|ref|XP_001661901.1| DNA mismatch repair protein muts [Aedes aegypti]
gi|108871885|gb|EAT36110.1| AAEL011780-PA [Aedes aegypti]
Length = 1130
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 267/981 (27%), Positives = 436/981 (44%), Gaps = 157/981 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFR 149
TP +Q ELK ++ D +L +VG + + DA + + LG ++++ F + P
Sbjct: 210 TPAMRQWWELKCRHMDCVLFFKVGKFYELYHMDATVGVEELG-FSYMKGEFAHSGFPEQA 268
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAI---KAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
LV+ GFKV V+QTET + + + + + + +L+ E G
Sbjct: 269 YERMATLLVDKGFKVARVEQTETPDMMQERCRKNKTNSKYDKVVKREICQVSLKGTEVFG 328
Query: 207 GGED-GCGGESNYLVCVVDD-DGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ Y++ + + G VG R GV ++ S G GEF D
Sbjct: 329 QQVHLTLNHQPKYMLAITERIKGEVGS------------RYGVCFIDTSLGVFHVGEFED 376
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPL----SKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
S L +L +PA +L + + ++Q K +LA +R E + +
Sbjct: 377 DSQGSRLLTLLSHYAPALVLQERNVVSAATQQIFKTVLA------GIRKEALTNESQF-W 429
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD-----------LAV 369
A + L EN + +DQN PE I +++ D LA+
Sbjct: 430 SAERTLKYLAENF---YGGSTDDQNSKWPE------VIRSLLDKSDHLGLTPDGNFKLAL 480
Query: 370 QALALTIRHLKQFGLERIMCLGASF---------------RSLSGSMEMTLSANTLQQLE 414
+AL I +LK+ L++ + ASF R ++ + M L + TL L
Sbjct: 481 KALGGCIWYLKRCLLDQQIISLASFVMYIPPDDVETCKNLRIVNSNRFMVLDSVTLNNLR 540
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGS 474
+ + G + +L++ M+H T +G RLL W+ P C+R++I R +AV+E+ E
Sbjct: 541 I----TEGEQ--SLVNRMDHCCTKFGKRLLHHWICSPSCERDVIVQRQEAVTELIE---- 590
Query: 475 YRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIF-HRTATPSEFI 533
DV+ +L V LG PD++R + +I A S+
Sbjct: 591 ---------------DVS--------LLQDVRQILGELPDLERMLAQIHTFGNAERSKNH 627
Query: 534 AVMQAILYA----GKQLQQLHIDG-----------EYREKVTSKTLHSALLKRLILTASS 578
+AILY GK+ Q I+ E KV+SK LL +L T+
Sbjct: 628 PDGRAILYEEQTYGKKKIQDFINTLKGFGTLTKLPELFGKVSSK-----LLVQLTQTSER 682
Query: 579 PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF--SEVARARKAVQSAKEELDSLINM 636
A + + EA D L +I+ G+ +E K +++ EEL+
Sbjct: 683 GGSFPDMADKIRFFD-EAFDHEQALKDGVIAPGEGLDAEYDAVHKEIKNILEELEEYKRK 741
Query: 637 CRKQLGMRNLEFMSVSGITHLIELP------ANFKVPLNWAKVNSTKKTIRYHSPEVLTA 690
K G + + F +E+P AN L K RYH+ E
Sbjct: 742 QEKYFGCK-IAFFGTDKKRFQLEIPESAAKKANSGYTLEGHK-KGKNGVKRYHTDETREF 799
Query: 691 LDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNK-NFV 749
L ++ ++ +V + ++F Y ++ + LD L +LA +R++ N
Sbjct: 800 LKRMMQTEDQRKMVLKDLSRRIFEKFSSSYEMWRTCIDLTGTLDVLTSLAEYARSEGNMC 859
Query: 750 RPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
P +DD + G HP + +N++PN N+ E ++TGPN+GGKS +
Sbjct: 860 VPEILDDSAGQVFELEEGIHPCVSDS--ENYIPNGVNIGGEGAPLVLLTGPNIGGKSTMM 917
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
RQV ++ +MAQ+GS +PA S + ++D I+TR+GA+D I G STFL ELNE S IL++
Sbjct: 918 RQVGILAVMAQIGSRIPAESCRMTLIDRIFTRLGANDDIMAGHSTFLVELNETSTILKHA 977
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG 929
T +SLV++DELGRGT+T+DG +IA A +++L + KC +F THY + D
Sbjct: 978 TRKSLVLLDELGRGTATYDGTSIAGAVVNFLADL-KCRSMFSTHYHNLVD---------- 1026
Query: 930 TYHVSYLTSHKV-MGPM----DSKSDQD-----VTYLYKVVPGVSESSFGFKVAQLAQLP 979
++ T +V +G M +++ D+D VT+LYK G S+GF A+LA +P
Sbjct: 1027 ----NFSTDSRVRLGHMACMVENEDDEDPTQETVTFLYKYADGACPKSYGFNAAKLAGMP 1082
Query: 980 PSCISRATVIAAKLEAEVSSR 1000
I RA ++ +EA+ R
Sbjct: 1083 ACIIKRAHELSKTVEADALKR 1103
>gi|76808909|ref|YP_334077.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1710b]
gi|254259362|ref|ZP_04950416.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1710a]
gi|76578362|gb|ABA47837.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1710b]
gi|254218051|gb|EET07435.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1710a]
Length = 938
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 256/927 (27%), Positives = 410/927 (44%), Gaps = 136/927 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 67 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 126
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 127 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 180
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 181 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 224
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 225 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 274
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 275 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 317
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 318 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 364
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 365 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 401
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 402 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 449
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 450 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 501
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 502 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 561
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 562 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 621
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 622 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKL 677
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 678 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 736
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 737 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 796
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 797 YFELTQLPVEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 844
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
QLA +P I A A LE + +++
Sbjct: 845 QLAGVPAPVIRAARKHLAHLEQQSAAQ 871
>gi|306821116|ref|ZP_07454732.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550809|gb|EFM38784.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 868
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 240/934 (25%), Positives = 434/934 (46%), Gaps = 151/934 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
K TP+ +Q +++K KY D +L +G + F EDA +K+L I +
Sbjct: 17 KNLTPMMKQYLDIKNKYQDCILFFRLGDFYEMFFEDAIETSKLLDITLTGRACGNNEKAP 76
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
+P +++RL+N G KV + +Q + P + G R ++ + T T+
Sbjct: 77 MCGVPYHSAKSYIQRLINYGKKVAICEQIQ-------DPKEVKGIVDRAITKIITPGTVL 129
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E + G + NY++ ++ + N+ EIS D+ G
Sbjct: 130 EDEMIQGSSN------NYIMSLISNGKNL---------------------EISYVDITTG 162
Query: 261 EFNDGFLR-SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
E N+ + + + +++P+E++ + K+ + SN+ E
Sbjct: 163 EVNNLTCNYNEIANIFFAVNPSEIIADESFYKKLSSEDFKNSKLISNLIDE--------- 213
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
N+ ++ +S Q+ + E+ + AIE + ++ + +
Sbjct: 214 -----------NNIVQNVIS----QDSEDFEEFKEKYAIEDVSE----SLSRIYKYVYDT 254
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEV---LRNNSNGSEYGTLLHIMNHTL 436
+QF + F S M L TL+ LE+ +R NSN TL ++N T
Sbjct: 255 QQFFDKNF------FYQRSKQAYMYLDYYTLKNLEIVESIRRNSNN----TLFDVLNKTN 304
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T GSR L++ + PL + + I RL+ +S +
Sbjct: 305 TSMGSRKLKQNLLKPLNNESDIKQRLEVLSCFVDDYS----------------------- 341
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
F +SS+L + D++R RI + + + + + +++ L K+L+ + ++
Sbjct: 342 -FTMNISSILKEI---YDLERISNRIVYDSVSQKDLLN-LKSSLICIKKLEDI-----FK 391
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG-DLLNLMIISNGQFSE 615
EK + AL+ I + + +I + K + G DL I + +
Sbjct: 392 EKDNE---YFALIYENISSVNYEVIIA-------LIEKSIQEMGEDLKYKHKIKSSYDEK 441
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA----NFKVPLNWA 671
+A RK + ++ + L + R++ G++NL+ + IE+ N K+P ++
Sbjct: 442 LAYYRKLMDNSSDILIKMEAEEREKTGIKNLKINYNKVFGYYIEISKGALQNAKIPEDYE 501
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK-EFGGYYAEFQAAVQAL 730
+ + + R+ + + L ++Q L+ + + + S +K E Y +
Sbjct: 502 RRQTLVSSERFIN-QSLKEIEQEMLSARQSEVSLENSLYSQVKDEIKKYIDRIMRLASIV 560
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLHA 789
A +D +L+ + ++V+P+ D++ + I +GRHPV++ IL D+ FVPNDT
Sbjct: 561 ADVDVYTSLSKTAIENDYVKPMIAVDNKLI---IKNGRHPVIEKILTDDGFVPNDT--IV 615
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNM GKS Y+RQVALI +MA +GS+VPAS A + ++DGIYTR+GASD +
Sbjct: 616 DDEMTHIITGPNMAGKSTYMRQVALIVLMAHIGSYVPASFASVPIIDGIYTRIGASDDLS 675
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
G+STF+ E++E S IL+N T +SLVI+DE+GRGTST+DG+++A+A ++Y+ + K L
Sbjct: 676 MGQSTFMVEMSEVSNILKNATEKSLVILDEIGRGTSTYDGMSLAFAIVEYIASNIKAKTL 735
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
THY ++ ++++F ++ Y M ++ +L K+V G ++ S+G
Sbjct: 736 VSTHYHELTSLESRF-DNIKNY------------CMLVDDTTEIKFLKKIVEGRADKSYG 782
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
VA LA +P + RA VI ++LE + V N
Sbjct: 783 IHVAMLADIPYEVLERANVILSRLETKEKKSVSN 816
>gi|429740262|ref|ZP_19273957.1| DNA mismatch repair protein MutS [Prevotella saccharolytica F0055]
gi|429153665|gb|EKX96441.1| DNA mismatch repair protein MutS [Prevotella saccharolytica F0055]
Length = 873
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 254/930 (27%), Positives = 436/930 (46%), Gaps = 149/930 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT---- 142
K TP+ +Q K ++PD LL+ G + + EDA +AAK+LGI +N +
Sbjct: 6 KGLTPMMKQFYSFKAQHPDALLLFRCGDFYETYSEDAVIAAKILGITLTKRNNGGSGDVT 65
Query: 143 --ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLE 200
A P L+ ++ +LV AG +V + Q E + RG++ L T
Sbjct: 66 EMAGFPYHALDTYLPKLVRAGKRVAICDQLEDPKLTK------TLVKRGITELVTPG--- 116
Query: 201 AAEDVGGGEDGCG-GESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV- 258
V G+ E+N+L + N GK+ GV ++ISTG+ +
Sbjct: 117 ----VALGDSVLNYKENNFLAAI-----NFGKMA-----------CGVAFLDISTGEFLT 156
Query: 259 -YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCF 317
G F+ +E +L + SP E+L + ++ E+ Y G V D +
Sbjct: 157 AQGAFD------YIEKLLGNFSPKEVLYERSHKQEFER----YFGTKHCV----FEMDDW 202
Query: 318 IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIR 377
+ A L ++ G TL +G I+ + +Q L +T +
Sbjct: 203 VFTEQTAR-QKLLKHFGTKTL------------KGFGVEHIQSGIVAAGAIMQYLEIT-Q 248
Query: 378 HLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
H + + I L + + L T++ LE+L+ +LL++++ T+T
Sbjct: 249 HTQ---INHITALA----PIEEEQYVRLDRFTIRSLELLQPMQEDG--ASLLNVIDRTVT 299
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G R+L+RW+ PL + LI RL+ V + +R D T
Sbjct: 300 PMGGRMLKRWLVFPLKEVQLIEQRLNVVETL------FR-------------DTT----- 335
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ--LHIDGEY 555
F +L L +G D++R +++ +P E I + A L A + L+ + + E
Sbjct: 336 FRTLLDEQLHRIG---DLERILSKAAVGRISPREMIQLKIA-LQAIQPLKAACMQTNNET 391
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
++ + L+ I P LLS N +I++ E
Sbjct: 392 LNRIGEQMSLCESLRDRIEHEIQP----DPPLLLSKGN-------------VIADAFSPE 434
Query: 616 VARARKAVQSAKEELDSLINMCRKQL---GMRNLEFMSVSGITHLIELPANFK--VPLNW 670
+ R+ + + D L+++ ++++ G+ +L+ + + +E+ +K VP W
Sbjct: 435 LDELRRISRGGR---DYLMDIQQREIEATGISSLKIGYNNVFGYYLEVRNTYKDKVPQEW 491
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + + RY + E+ +++ A+E++ I+ ++ + + + Q +
Sbjct: 492 VRKQTLAQAERYITQELKEYEEKILGADEKIQILEEQLFNELITATQEFIPQIQINANVI 551
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLH 788
A LDCL + A + +++RP FV+D + + I GRHPV++T L +++VPND L
Sbjct: 552 ARLDCLLSFAKTAEENHYIRP-FVEDSDVLNIR--QGRHPVIETQLPPGEHYVPNDIFLD 608
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ + IITGPNM GKS +RQ ALI ++AQ+GSFVPA SA + +D I+TR+GASD+I
Sbjct: 609 TQHQQIIIITGPNMAGKSALLRQTALIVLLAQIGSFVPAESAIIGTVDKIFTRVGASDNI 668
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--C 906
G STF+ E+ EA+ IL N + +SLV+ DELGRGTST+DG++IA+A +++L EH K
Sbjct: 669 SLGESTFMVEMTEAANILNNVSPRSLVLFDELGRGTSTYDGISIAWAIVEHLHEHPKARA 728
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ +++ F + Y+VS + + + ++ K+ G SE
Sbjct: 729 RTLFATHYHELNEMEKNFK-RIKNYNVSV-----------KEVEGKIIFMRKLEKGGSEH 776
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
SFG VA +A +P S + RA V+ +LEA+
Sbjct: 777 SFGIHVADIAGMPKSIVKRAGVVLKQLEAD 806
>gi|254184405|ref|ZP_04890995.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1655]
gi|184214936|gb|EDU11979.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1655]
Length = 939
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 258/928 (27%), Positives = 413/928 (44%), Gaps = 138/928 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 67 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 126
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A +P + ++ +LV G + +Q + AA K GP R + + T TL
Sbjct: 127 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPAASK-------GPVERKVVRVVTPGTLTD 179
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
A + D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 180 AALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAE 223
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
L + LE + PAE+L + AG + RV D G
Sbjct: 224 LAPDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQ 273
Query: 322 ALA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH 378
L EV SL + G L++ + G + + A Q L RH
Sbjct: 274 RLCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RH 316
Query: 379 LKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTI 438
++ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 317 VRSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTA 363
Query: 439 YGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQF 498
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 364 MGSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG---------------- 401
Query: 499 YYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREK 558
L S+ ++L + D++R R+ +A P + ++ L L RE+
Sbjct: 402 ---LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RER 448
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFS 614
V ++A L RL P G L + E A D G +I+ G +
Sbjct: 449 VAEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDA 500
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAK 672
E+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 501 ELDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRR 560
Query: 673 VNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
+ K RY +PE+ T D+ A E RA +D L+ + Q LA
Sbjct: 561 RQTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAE 620
Query: 733 LDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAERE 792
LD L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 621 LDLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERK 676
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GR
Sbjct: 677 LL-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGR 735
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF T
Sbjct: 736 STFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFAT 795
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++ + +F + + + H ++ +L+ V G + S+G +V
Sbjct: 796 HYFELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQV 843
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSR 1000
AQLA +P I A A LE + +++
Sbjct: 844 AQLAGVPAPVIRAARKHLAHLEQQSAAQ 871
>gi|107028732|ref|YP_625827.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia AU 1054]
gi|122977738|sp|Q1BHQ1.1|MUTS_BURCA RecName: Full=DNA mismatch repair protein MutS
gi|105897896|gb|ABF80854.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia AU 1054]
Length = 885
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 251/925 (27%), Positives = 406/925 (43%), Gaps = 134/925 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K +PD L+ +G + F EDAE AA++L + A A
Sbjct: 12 HTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G V + +Q A GP R + + T TL A
Sbjct: 72 GVPHHAVEQYLAKLVKMGESVAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D YL+ + G + GV V +G+ + +++G + E
Sbjct: 126 LLSDKND------VYLLAMC-----TGHNKRGVA-----VNIGLAWLNLASGALRLAEIE 169
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG ++ RV D G L
Sbjct: 170 PDQLAAALERI----RPAEILTPDGATDAIP------AGAGASKRVPAWHFDIASGTQRL 219
Query: 324 AEVMSL--YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ + + + G +L+ SA + A +RH++
Sbjct: 220 CDQLDVASLDGFGAHSLT----------------SACGAAGALLLYAAATQGQQLRHVRS 263
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+E + + + L T + LE L G+E TL +++ T GS
Sbjct: 264 LKVE------------NETEYIGLDPATRRNLE-LTETLRGTESPTLYSLLDTCCTTMGS 310
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLR W+ HP SV + + +++
Sbjct: 311 RLLRHWLHHP-------------------------PRASVAAQSRQQAIGALLDAPANAS 345
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L ++ ++L + D++R R+ +A P + ++ ++ A L RE++ +
Sbjct: 346 LDALRSALRQIADVERITGRLALLSARPRD-LSSLRDTFAALPAL---------RERIGA 395
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEVA 617
++ L R+ + PA L S + E A D G +I+ G +E+
Sbjct: 396 IVANADALARVDAALAPPAECLDL--LTSAIAPEPAAMVRDGG------VIARGYDAELD 447
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNS 675
R ++ + L L R + G+ NL E+ V G + KVP ++ + +
Sbjct: 448 ELRDISENCGQFLIDLEARERARTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQT 507
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
K RY +PE+ T D+ A E RA +DS L+ + E Q A A LD
Sbjct: 508 LKNAERYITPELKTFEDKALSAQERALARERALYDSVLQALLPFIPECQRVASAPAELDL 567
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND ER+
Sbjct: 568 LAAFAERARALDWVAPTFTDE---IGIEIEQGRHPVVEA-QVEQFIANDCRFGTERKLL- 622
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA SA +D I+TR+GA+D + GRSTF
Sbjct: 623 LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTF 682
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL H C LF THY
Sbjct: 683 MVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAHNACYTLFATHYF 742
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ + +F + + + H ++ +L+ V G + S+G +VAQL
Sbjct: 743 ELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVNEGPANQSYGLQVAQL 790
Query: 976 AQLPPSCISRATVIAAKLEAEVSSR 1000
A +P I A A LE + +S+
Sbjct: 791 AGVPAPVIRAARKHLAYLEQQSASQ 815
>gi|83719722|ref|YP_442443.1| DNA mismatch repair protein MutS [Burkholderia thailandensis E264]
gi|257138646|ref|ZP_05586908.1| DNA mismatch repair protein MutS [Burkholderia thailandensis E264]
gi|123537049|sp|Q2SXA6.1|MUTS_BURTA RecName: Full=DNA mismatch repair protein MutS
gi|83653547|gb|ABC37610.1| DNA mismatch repair protein MutS [Burkholderia thailandensis E264]
Length = 893
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 255/926 (27%), Positives = 412/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K ++P+ L+ +G + F EDAE AA++L + A A
Sbjct: 23 HTPMMQQYLRIKAEHPETLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 82
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 83 GVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 136
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D +L+ + VG + GV +G+ + +++G + E
Sbjct: 137 LLSDKSD------VFLLALC-----VGHNKRGVAST-----IGLAWLNLASGALRLAEIA 180
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 181 PDQLGAALERI----RPAEILAADGAIEAVP------AGTGAITRVPAWHFDIASGTQRL 230
Query: 324 A---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
EV SL + G L++ + G + + A Q L RH++
Sbjct: 231 CDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHVR 273
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+E + S + L +T + LE L G+E TL +++ T G
Sbjct: 274 SLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAMG 320
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLLR W+ HP AR A+ +++ +
Sbjct: 321 SRLLRHWLHHPPRASVAAQARHQAIG-------------------------ALLDAPVHV 355
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L S+ ++L + D++R R+ +A P + ++ ++ A L RE+V
Sbjct: 356 GLDSLRSALRQIADVERITGRLALLSARPRD-LSSLRDTFAALPAL---------RERVA 405
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEV 616
++A L RL P G L + E A D G +I+ G +E+
Sbjct: 406 EIAPNAAALGRLEAALEPPP--GCLDLLTRAIAPEPAAMVRDGG------VIARGYDAEL 457
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 458 DELRDISENCGQFLIDLETRERARTGIPNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 517
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +DS L+ + Q LA LD
Sbjct: 518 TLKNAERYITPELKTFEDKALSAQERALARERALYDSVLQALLPHIEGCQRVASGLAELD 577
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F+D+ + I I GRHPV++ ++ F+ ND L+++R+
Sbjct: 578 LLAAFAERARTLDWVAPEFIDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNSDRKLL 633
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRST
Sbjct: 634 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRST 692
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL H +C LF THY
Sbjct: 693 FMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHY 752
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 753 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVAQ 800
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 801 LAGVPAPVIRAARKHLAHLEQQSAAQ 826
>gi|337286407|ref|YP_004625880.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
gi|335359235|gb|AEH44916.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
Length = 857
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 192/600 (32%), Positives = 308/600 (51%), Gaps = 64/600 (10%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
+ + T + LE+LRNN +GS G+LL +++ TLT G RLL+ W+ +PL + I ARL
Sbjct: 265 LIIDEATKRNLEILRNNLDGSLKGSLLWVLDKTLTPMGGRLLKEWLLYPLRNLESIEARL 324
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
+AV+ + + + + L R D++R R
Sbjct: 325 EAVAYLVDEPSKRKNLREL---------------------------LARIADVERLTGRA 357
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
A P + +A+ + L QL++L EK++ L A+ + L++ +
Sbjct: 358 AMGVANPRDLLALKDS-LKMVPQLKEL-----LPEKISP--LLDAIKENLLVPGDLVQNL 409
Query: 583 GKAAKLLSTVN-KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQL 641
K + + VN KE +I +G E+ R+ A L L R +
Sbjct: 410 EKTIREEAPVNFKEGG---------VIKDGVHEELDELRRLKDDALSFLAELETRERART 460
Query: 642 GMRNLEFMSVSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANE 699
G+ NL+ + IE+ + KVP N+ + + R+ +PE+ ++ A+E
Sbjct: 461 GIPNLKVGYNRVFGYYIEVSKSHLSKVPDNYIRKQTLVGGERFITPELKEFEAKVLSADE 520
Query: 700 ELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEP 759
+ + + + K E + +ALA LD L +LA ++ N++RP ++ EP
Sbjct: 521 RIKELEQELFLEIRKNVAEKAQELKKLARALATLDVLASLAEVAVTNNYIRPKIIE--EP 578
Query: 760 VQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIM 818
I I GRHPV++ L +FVPN L + +ITGPNM GKS +RQ ALI ++
Sbjct: 579 -GIQIREGRHPVVEKALPSGSFVPNSVKLDLKENVVLVITGPNMAGKSTILRQTALITLL 637
Query: 819 AQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVD 878
A VGSFVPA A + + D I++R+GASD + +GRSTF+ E++E + IL T++SLVI+D
Sbjct: 638 AHVGSFVPAEEATIGLCDRIFSRIGASDQLSRGRSTFMVEMSECANILHQATSRSLVILD 697
Query: 879 ELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTS 938
E+GRGTST+DG+AIA+A ++L E KK M LF THY ++ ++ ++ G + ++V+ T
Sbjct: 698 EIGRGTSTYDGLAIAWAVAEFLHE-KKIMTLFATHYHELVELAGEYPG-IKNFNVAVKTF 755
Query: 939 HKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
DQ + +LY+++PG + S+G +VA LA LP I+RA I LE + S
Sbjct: 756 E----------DQ-IIFLYRLLPGPASESYGVQVAALAGLPKEVIARAKDILKSLENKTS 804
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +E+K KYPD +L +G + F EDAE+A+++L I
Sbjct: 5 TPMFRQYLEIKEKYPDAILFFRLGDFYEMFFEDAELASRILDIALTSRDKGTKEKVPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTE 171
+P ++ RLV+AG+KV + +Q E
Sbjct: 65 VPAANAAHYINRLVSAGYKVAICEQVE 91
>gi|269926438|ref|YP_003323061.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
gi|269790098|gb|ACZ42239.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
Length = 930
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 255/940 (27%), Positives = 408/940 (43%), Gaps = 178/940 (18%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH-----LDHNFM 141
+ P +Q +ELK KYP +L+ +G + F +DA + A+ +
Sbjct: 20 RDLVPSRRQYLELKRKYPHAILLYRMGDFYEAFDDDARVVARDARVTLTSRTFGRSGRVP 79
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A +P LN ++ RL+NAG V + +Q PGK G R ++ + T T+
Sbjct: 80 MAGVPHHALNYYLSRLLNAGHTVAIAEQMSE-------PGK-GLVEREVTRVLTPGTVVE 131
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
+ + GE+ YL V D VG R+G+ V++STG E
Sbjct: 132 SALLPAGEN------RYLAAVYD----VG------------ARIGIAWVDVSTG-----E 164
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
F LR G+ S++ ++ L A PA +C I G
Sbjct: 165 FRLMELR-----------------GEDASERLQEEL-ARISPA----------ECLIPEG 196
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRHL 379
E++ + + + QN D P +A Q L +R L
Sbjct: 197 FPYELV-----LSQSHATTVRRQNCD-----------------PQVAYQLLCKHFGVRSL 234
Query: 380 KQFGLE---------------------RIMCLGASFRSLSGSMEMTLSANTLQQLEVLRN 418
FG ++C+ S R + + T + LE+ R+
Sbjct: 235 DAFGCHDAKASLGAAGAIYTYIEQTNPSLLCMLTSIRMECAEDMVGMDPATRRNLELTRS 294
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
G G+LL +++ T T GSR +RR + PL D I R D + + +
Sbjct: 295 FGTGGSRGSLLGVVDQTSTPMGSRAMRRLINTPLRDLQEIRRRQDIIEPLVQM------- 347
Query: 479 ESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA 538
PQ +++ L +G D++R ++R +T +F+++ A
Sbjct: 348 -----------------PQVRARIANQLVQIG---DLERAVSRCTQSGSTLRDFLSLSSA 387
Query: 539 ILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAAD 598
+ H+D R + S T AL A+ + I +LS + A+
Sbjct: 388 LG---------HVDSLVR--ILSGTHQQAL-------ANLASSIDTCEDILSRLQMAVAE 429
Query: 599 QGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITH 656
D +I G E+ A + ++SA+E L L R++ G+R+L+ + V G
Sbjct: 430 ADD--GSPVILPGFMPELGDALEELRSAREWLARLEQKERERTGIRSLKVGYNKVFGYYI 487
Query: 657 LIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEF 716
+ P VP + + + R+ + + ++ A + + + A
Sbjct: 488 EVTRPNLHLVPREYVRKQTISTGERFVTEALKEVESRITRAEDAIERLQNEAIALLRSLV 547
Query: 717 GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL 776
A Q LA +D L ALA ++ +VRP VDD + ++I +GRHPV+++ L
Sbjct: 548 SANTRRLLATAQLLAEMDALVALAEVASRCGWVRP-LVDDSDVIEIR--NGRHPVVESSL 604
Query: 777 L-DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
+ FVPND + +ITGPNMGGKS Y+RQVALI ++AQ+GSFVPA SA + ++
Sbjct: 605 EGERFVPNDCYIGGNWPRVLLITGPNMGGKSTYLRQVALIVLLAQIGSFVPAESARIGLV 664
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D I+TR+GA D + +G STF+ E+ E + IL T +SLV++DE+GRGTST+DG+AIA A
Sbjct: 665 DRIFTRVGAHDDLARGASTFMVEMVETATILNGATERSLVVLDEIGRGTSTYDGMAIAQA 724
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
L+ + + + LF THY ++ + K S HVS ++ + +
Sbjct: 725 VLEDIHDRVRARTLFATHYLELTTVAKKLP-SAQNVHVSV-----------AEERDHIVF 772
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
LY V PG ++ ++G VA+LA LPP RA I L A
Sbjct: 773 LYSVRPGAADRAYGIHVARLAGLPPWVAGRAENILHALSA 812
>gi|78189282|ref|YP_379620.1| DNA mismatch repair protein MutS [Chlorobium chlorochromatii CaD3]
gi|90109843|sp|Q3AQZ8.1|MUTS_CHLCH RecName: Full=DNA mismatch repair protein MutS
gi|78171481|gb|ABB28577.1| DNA mismatch repair protein MutS [Chlorobium chlorochromatii CaD3]
Length = 873
Score = 265 bits (678), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 259/930 (27%), Positives = 424/930 (45%), Gaps = 135/930 (14%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
+ + + K+++P+ +Q +E+K +YPD LL+ VG + F +DA + L I
Sbjct: 2 AKEQSGTKEHSPMMRQYLEVKERYPDYLLLFRVGDFYETFFDDAITVSTALNIVL----T 57
Query: 140 FMTASIPTFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALY 194
TA IP H + +L+ G+KV V Q E A G R ++ +
Sbjct: 58 KRTADIPMAGFPYHASEGYIAKLIKKGYKVAVCDQVEDPA------DAKGIVRREITDIV 111
Query: 195 TKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIST 254
T Y ++DD N +G + GV ++++T
Sbjct: 112 TPGV------------------TYSDKLLDDRHNNYLAGVAFLKEGKTLMAGVAFIDVTT 153
Query: 255 GDVVYGEFN-DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
EF L L L L P+E+L +++ E+ LL S +
Sbjct: 154 A-----EFRITTLLPEELPHFLAGLHPSEILFS---TQEKERTLLLKKSLPSETLI---- 201
Query: 314 RDCFIGGGALAEVMSLYENMGEDTL----SNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
+L E E + L + + + G +R+A+ +A
Sbjct: 202 --------SLLEPWMFSEEQSQTVLLRHFKTHSLKGFGIETAGGNRAAL--------VAA 245
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
+ + +Q L I +G L + M+L T + LE++ + +GS G+LL
Sbjct: 246 GVILQYLEETRQNSLSYITRIG----ELHHTEFMSLDQQTKRNLEIISSMQDGSLSGSLL 301
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+M+ T G+RLLRRW+ PL I R +AV E+ E+ RT
Sbjct: 302 QVMDRTRNPMGARLLRRWLQRPLKKLTNIQERHNAVEELVEN----RT------------ 345
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
+ SV L D++R + RI P E + + L A LQ L
Sbjct: 346 -----------LRESVAEQLAAINDLERSLARIATLRTIPRE-VRQLGISLAAIPTLQAL 393
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
D VT+ L + LTA+ + A ++ S ++ +A + + I
Sbjct: 394 LSD------VTAPRLQA-------LTAALQPLPKLAEQIESAIDPDAG--ATMRDGGYIR 438
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVP 667
G E+ R +AK+ L + R+ + +L+ + IE+ AN KVP
Sbjct: 439 AGYNEELDDLRSIASTAKDRLMQIQQEEREATAISSLKVSYNKVFGYYIEISRANSDKVP 498
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAA-WDSFLKEFGGYYAEFQAA 726
+ K + RY P L ++ L EE +++ A + + ++ A QA
Sbjct: 499 AYYEKKQTLVNAERYTIP-ALKEYEEKILHAEEKSLLLEAELFRNLCQQIATEAATVQAN 557
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPND 784
LA LD L + A + ++ +P HE + I +GRHPVL+ +L ++++PND
Sbjct: 558 AALLAELDALCSFAECAVAFDYTKPTM---HEGTTLSITAGRHPVLERLLGAEESYIPND 614
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
+ +++ IITGPNM GKS Y+RQ+ LI ++AQ GSFVPA SA L V+D I+TR+GA
Sbjct: 615 CHFD-DKQTMLIITGPNMAGKSSYLRQIGLIVLLAQAGSFVPAESASLGVVDRIFTRVGA 673
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
SD++ G STFL E+NEA+ IL N T +SL+++DE+GRGTST DG++IA++ +Y++
Sbjct: 674 SDNLTSGESTFLVEMNEAANILNNATERSLLLLDEIGRGTSTFDGMSIAWSMCEYIVHTI 733
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
LF THY ++A+++ + G V Y+ + + ++ + V +L K+V G +
Sbjct: 734 GAKTLFATHYHELAELEERLKGVVN-YNATVV-----------ETAERVIFLRKIVRGAT 781
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++S+G +VA++A +P ISRA I A LE
Sbjct: 782 DNSYGIEVAKMAGMPNDVISRAREILAGLE 811
>gi|343502330|ref|ZP_08740187.1| DNA mismatch repair protein MutS [Vibrio tubiashii ATCC 19109]
gi|418480067|ref|ZP_13049133.1| DNA mismatch repair protein MutS [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342815067|gb|EGU49996.1| DNA mismatch repair protein MutS [Vibrio tubiashii ATCC 19109]
gi|384572260|gb|EIF02780.1| DNA mismatch repair protein MutS [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 859
Score = 265 bits (678), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 182/597 (30%), Positives = 301/597 (50%), Gaps = 73/597 (12%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ N + G++ TL +++HT T GSR+L+RW+ P+ D + ++ RLDA
Sbjct: 271 LDAATRRNLEITHNLAGGTD-NTLAEVLDHTATAMGSRMLKRWLHQPMRDIDTLNHRLDA 329
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
+SE+ E + L VL +G DI+R + R+
Sbjct: 330 ISELKEV-------------------------SLFADLHPVLKQIG---DIERILARLAL 361
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
R+A P + M + +A +QL +L + S H L K A A + +
Sbjct: 362 RSARPRD----MARLRFAMQQLPEL-------AESMSSLAHPYLSK----LAQYAAPMDE 406
Query: 585 AAKLLSTVNKEAA-----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRK 639
+LL K+ D G +I+ G +E+ RK A E L+ + R+
Sbjct: 407 VCELLERAIKDNPPVVIRDGG------VIAEGYNAELDEWRKLADGATEYLEQMEQDERE 460
Query: 640 QLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
+ G+ +L+ + +V G + + VP ++ + + K RY PE+ D++ +
Sbjct: 461 RHGIDSLKVGYNNVHGFFIQVSRGQSHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNS 520
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
+ + + W+ + + Q A++ +D L LA + + + RP +
Sbjct: 521 KSKALALEKQLWEELFDLLLPHLEQMQNVASAVSQIDVLQNLAERADSLGYCRPTLTKE- 579
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
V IHI +GRHPV++ ++ D F+ N L+ +R+ IITGPNMGGKS Y+RQ ALI +
Sbjct: 580 --VGIHIQAGRHPVVEQVMDDPFIANPIELNPQRKML-IITGPNMGGKSTYMRQTALIAL 636
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MA +GS+VPA SA++ +D I+TR+GASD + GRSTF+ E+ E + IL N TA SLV++
Sbjct: 637 MAHIGSYVPAESAQIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATANSLVLM 696
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
DE+GRGTST+DG+++A+A+ ++L + M LF THY ++ ++ + + H+ L
Sbjct: 697 DEIGRGTSTYDGLSLAWASAEWLAKELGSMTLFATHYFELTELPNQIP-HLANVHLDAL- 754
Query: 938 SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ + +++ V G + S+G VA LA +P S I A +LE
Sbjct: 755 ----------EHGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKSVIKNARAKLTQLE 801
Score = 47.0 bits (110), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNF 140
+K+TP+ QQ ++LK + PD+LL +G + F +DA+ A+++L I A
Sbjct: 9 KQKHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPI 68
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
A +P + ++ +LV G V + +Q A GP R + + T T+
Sbjct: 69 PMAGVPFHAVEGYLAKLVQLGESVAICEQIGDPAT------SKGPVERAVVRIVTPGTV 121
>gi|167837123|ref|ZP_02464006.1| DNA mismatch repair protein [Burkholderia thailandensis MSMB43]
gi|424903627|ref|ZP_18327140.1| hypothetical protein A33K_15001 [Burkholderia thailandensis MSMB43]
gi|390931500|gb|EIP88901.1| hypothetical protein A33K_15001 [Burkholderia thailandensis MSMB43]
Length = 889
Score = 265 bits (678), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 257/927 (27%), Positives = 410/927 (44%), Gaps = 136/927 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K ++PD L+ +G + F EDAE AA++L + A +
Sbjct: 18 QHTPMMQQYLRIKAEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGNPIKM 77
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 78 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 131
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 132 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEI 175
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 176 APDQLGAALERI----RPAEILAADGAIEAVP------AGMGAITRVPAWHFDIASGTQR 225
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ S G + + A Q L RH+
Sbjct: 226 LCDQLEVASL-DGFGAQALTSA--------------SGAAGALLIYAAATQGQQL--RHV 268
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 269 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 315
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ VG
Sbjct: 316 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PAHVG----------------- 352
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 353 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 400
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 401 AEIAPNAAALGRLDAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 452
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 453 LDELRDISENCGQFLIDLETRERARTGIPNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 512
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 513 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 572
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ +R+
Sbjct: 573 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPDRKL 628
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 629 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 687
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 688 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 747
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 748 YFELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 795
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
QLA +P I A A LE + +++
Sbjct: 796 QLAGVPAPVIRAARKHLAHLEQQSAAQ 822
>gi|193213813|ref|YP_001995012.1| DNA mismatch repair protein MutS [Chloroherpeton thalassium ATCC
35110]
gi|193087290|gb|ACF12565.1| DNA mismatch repair protein MutS [Chloroherpeton thalassium ATCC
35110]
Length = 880
Score = 265 bits (678), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 198/599 (33%), Positives = 308/599 (51%), Gaps = 69/599 (11%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
+ L T + LE+L G+ GTL+ +++ T+T G+RLL++WV P + I RL
Sbjct: 279 IALDPQTKRNLEILYAMQTGAREGTLIDVIDKTVTAMGARLLKKWVGRPSRRMSQIQNRL 338
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
DAV +V + L S+ D++R + RI
Sbjct: 339 DAV------------------------EVFLTRKDLKANLREAFKSIC---DMERVLARI 371
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLI--LTASSPA 580
A P E +L G L Q+ +++ + + + L+ L LTA+ P
Sbjct: 372 ATGRANPKE-------VLSLGGSLAQV---PDFKAALLE--IETPLVAELQNGLTAT-PE 418
Query: 581 VIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQ 640
+ + + ++ + G+ +I G +E+ R SAKE L + RK+
Sbjct: 419 LTEEIFRAINPETPATLNDGN-----VIREGYNAELDELRSLAGSAKEMLQKVQADERKK 473
Query: 641 LGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALAN 698
G+ +L +F V G + + KVP + K + RY P +L ++ L
Sbjct: 474 TGISSLKVQFNRVFGYYIEVSKANSEKVPDYYEKKQTLVNAERYTIP-ILKEYEEKILTA 532
Query: 699 EELTIVCRAAWDSFLKEFGGYYAE-FQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
EE I S L++ AE QA + +A LDCL + A L+ N+V+P + H
Sbjct: 533 EERRITLEQELFSALRQRIAEDAETIQADAEHIATLDCLCSYAELAEKSNYVKP---EIH 589
Query: 758 EPVQIHICSGRHPVLDTIL-LD-NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALI 815
E I I +GRHPVL+ I+ +D +VPND L E QIITGPNM GKS ++RQV LI
Sbjct: 590 ENDVIDIKNGRHPVLEKIMPIDRKYVPNDCRLDVETR-VQIITGPNMSGKSSFLRQVGLI 648
Query: 816 GIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLV 875
++AQ GS+VPA SA + ++D I+TR+GASD++ G STFL E+NEA+ IL N TAQSL+
Sbjct: 649 VLLAQAGSYVPAESASIGLVDKIFTRVGASDNLAAGESTFLVEMNEAANILNNGTAQSLI 708
Query: 876 IVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSY 935
++DE+GRGTST+DG++IA+A +++ + LF THY ++A+++ +
Sbjct: 709 LLDEIGRGTSTYDGMSIAWAMTEFIHDAIGAKTLFATHYHELAELEEQ------------ 756
Query: 936 LTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
L K +++ V +L K+V G +++S+G +VA++A LP ISRA I A+LE
Sbjct: 757 LVRVKNFNATVEETEDTVIFLRKIVRGAADNSYGIEVAKMAGLPDKVISRAKAILAELE 815
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K TP+ +Q ++K++YP V+L+ VG + F +DA+ ++ L I N +A +P
Sbjct: 11 KDETPMMRQYDKIKSQYPGVILLFRVGDFYETFFDDAKAVSEALNIVLTRRSNGSSAEVP 70
Query: 147 TFRLNVH-----VRRLVNAGFKVGVVKQTE 171
H V RLV GF+V + Q E
Sbjct: 71 MAGFPHHAAENYVARLVKRGFRVALCDQVE 100
>gi|126654495|ref|XP_001388418.1| DNA repair protein [Cryptosporidium parvum Iowa II]
gi|126117123|gb|EAZ51223.1| DNA repair protein [Cryptosporidium parvum Iowa II]
Length = 1242
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 264/992 (26%), Positives = 444/992 (44%), Gaps = 144/992 (14%)
Query: 63 PKKPKLSPHTLNPIPTPSSQTTHNKK----YTPLEQQVVELKTKYPDVLLMIEVGYKFRF 118
P P P T I PSS + K+ +TP +Q ELK ++ D LL ++G +
Sbjct: 290 PLDPCYDPST---IWVPSSNSREAKEERMHFTPAMEQYWELKKEHFDKLLFFKMGKFYEL 346
Query: 119 FGEDAEMAAKVLGIYAHLDHNFMTAS------IPTFRLNVHVRRLVNAGFKVGVVKQTET 172
F DA + K H D + ++ P L+ + +LV G++V VV+Q ET
Sbjct: 347 FYIDAYICQK------HCDLRWTSSDSKPHVGFPETALHAYANKLVELGYRVVVVEQMET 400
Query: 173 AA-------IKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDD 225
+ G K R ++ ++T TL D ++ L+ +
Sbjct: 401 PKELEERNRSASRGVKKDKAIKRSVNEVFTNGTLVRP-------DMLSDMASILMTLYFS 453
Query: 226 DGNVGKIRNGVFGDGFDVRLGVVAVEISTGD---VVYGEFNDGFLRSGLEAVLLSLSPAE 282
+ + +GVV V+I+TG + E D FL+ + ++ + P E
Sbjct: 454 KKD---------SEDLTYEIGVVCVDITTGKAELINIEEKGDQFLQ--VRTIVCQVQPKE 502
Query: 283 L--LLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLS 339
+ L G PLS +L Y RD A+ +++ +E +
Sbjct: 503 IAYLPGNIPLS------ILRYLSSIVPSIQLTNFRDFVDSVLAINDILETFEKL------ 550
Query: 340 NNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSG 399
N+ VP+ N + N AL+ T R+L L + + +F
Sbjct: 551 -----NVPVPDVVNR------LCNESKSLCCALSGTFRYLTTILLCDRLIMTGTFTEYDP 599
Query: 400 SMEMTLSANT--LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNL 457
S+ L N ++ LE+L++ +G E +L + HT+T G+RLL+RW+T+PL +
Sbjct: 600 SVSKHLIVNVGAIKDLELLQSQ-HGDEKNSLFGFLKHTITPGGTRLLKRWITYPLVNTER 658
Query: 458 ISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQR 517
I+ RLD+V + ++ SE + + + ++ +E + D +R
Sbjct: 659 INERLDSVKWLMDN------SEKLYEFRD---ELRAIERSASSASRGSRKKYSQHLDFER 709
Query: 518 GITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTAS 577
I RI S + + +Y +Q+ + E V S L ++L+ +I
Sbjct: 710 LINRI------TSGVLQNKRGAVYFSNVVQR-----RFDEFVNSMNLFDSVLQCIIRVFG 758
Query: 578 SPAVIGKAAKLLSTVN--KEAADQGDLLNLM-----------IISNGQ--------FSEV 616
+ KLL+ + K+ + +G L N+ + SNG+ E
Sbjct: 759 DENLRKDMPKLLAALTGIKDESSEGFLENIFATTERLRSLVTLDSNGKDWIPVPGNCKEY 818
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF---KVPLNWAKV 673
+++ K D + KQ+ + F++ + + +E P + + P + A++
Sbjct: 819 DDLLESINETKLCFDEELKRISKQMNTTAISFVN-NKYRYEVECPESIPKSRFP-DSAEI 876
Query: 674 NSTKK-TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAA 732
S+KK +R+H+ E+ + L E+L KEF + F +++
Sbjct: 877 TSSKKGYVRFHTEEIKQLVYDLEYKEEQLQKSLFPYLHLMCKEFHSELSSFMGISDSISQ 936
Query: 733 LDCLHALATLSRNKN---FVRPVFVDDHE----PVQIHICSGRHPVLDTILLDNFVPNDT 785
LD L +LA +S + + F +PVF+ E P+ + + RHPV+ L N++PND
Sbjct: 937 LDVLSSLALVSLDTSDGPFCKPVFLSKEETNGLPM-LELKESRHPVV-AKLKTNYIPNDI 994
Query: 786 NLH--AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
L+ + C ++TGPNMGGKS +RQ + IMAQ+G +VPAS L +D I+TR+G
Sbjct: 995 LLNGGSSPAPCSLVTGPNMGGKSTILRQTCISVIMAQIGCYVPASECRLTAVDKIFTRIG 1054
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A D I +G+STFL EL E + IL + + SLVI+DELGRGTST DG AI+ ATL+Y+
Sbjct: 1055 AYDLIIEGKSTFLVELEETADILNHSSEDSLVIIDELGRGTSTFDGTAISIATLEYISRV 1114
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
KC LF TH + D + T V +H+ +++ + +T+LYK + G+
Sbjct: 1115 IKCRCLFSTHLHLLCDEFSNDT-KVLPFHMDLKLNNET---------RSITFLYKFISGI 1164
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
S+G VAQLA +P + + +A +E+
Sbjct: 1165 CPKSYGMNVAQLAGIPQEVVDNSVALAKDVES 1196
>gi|167739298|ref|ZP_02412072.1| DNA mismatch repair protein [Burkholderia pseudomallei 14]
Length = 939
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 256/927 (27%), Positives = 410/927 (44%), Gaps = 136/927 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 67 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 126
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 127 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 180
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 181 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 224
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 225 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 274
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 275 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 317
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 318 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 364
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 365 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 401
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 402 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 449
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 450 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 501
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 502 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 561
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 562 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 621
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 622 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKL 677
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 678 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 736
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 737 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 796
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 797 YFELTQLPAEFPHAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 844
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
QLA +P I A A LE + +++
Sbjct: 845 QLAGVPAPVIRAARKHLAHLEQQSAAQ 871
>gi|121599042|ref|YP_993485.1| DNA mismatch repair protein MutS [Burkholderia mallei SAVP1]
gi|124385860|ref|YP_001029086.1| DNA mismatch repair protein MutS [Burkholderia mallei NCTC 10229]
gi|126448109|ref|YP_001080993.1| DNA mismatch repair protein MutS [Burkholderia mallei NCTC 10247]
gi|167919640|ref|ZP_02506731.1| DNA mismatch repair protein [Burkholderia pseudomallei BCC215]
gi|238561606|ref|ZP_00441712.2| DNA mismatch repair protein MutS [Burkholderia mallei GB8 horse 4]
gi|254178430|ref|ZP_04885085.1| DNA mismatch repair protein MutS [Burkholderia mallei ATCC 10399]
gi|254209324|ref|ZP_04915670.1| DNA mismatch repair protein MutS [Burkholderia mallei JHU]
gi|254358006|ref|ZP_04974279.1| DNA mismatch repair protein MutS [Burkholderia mallei 2002721280]
gi|121227852|gb|ABM50370.1| DNA mismatch repair protein MutS [Burkholderia mallei SAVP1]
gi|124293880|gb|ABN03149.1| DNA mismatch repair protein MutS [Burkholderia mallei NCTC 10229]
gi|126240979|gb|ABO04072.1| DNA mismatch repair protein MutS [Burkholderia mallei NCTC 10247]
gi|147750097|gb|EDK57168.1| DNA mismatch repair protein MutS [Burkholderia mallei JHU]
gi|148027133|gb|EDK85154.1| DNA mismatch repair protein MutS [Burkholderia mallei 2002721280]
gi|160699469|gb|EDP89439.1| DNA mismatch repair protein MutS [Burkholderia mallei ATCC 10399]
gi|238524194|gb|EEP87628.1| DNA mismatch repair protein MutS [Burkholderia mallei GB8 horse 4]
Length = 939
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 256/927 (27%), Positives = 410/927 (44%), Gaps = 136/927 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 67 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 126
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 127 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 180
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 181 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 224
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 225 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 274
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 275 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 317
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 318 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 364
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 365 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 401
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 402 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 449
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 450 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 501
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 502 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 561
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 562 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 621
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 622 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKL 677
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 678 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 736
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 737 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 796
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 797 YFELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 844
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
QLA +P I A A LE + +++
Sbjct: 845 QLAGVPAPVIRAARKHLAHLEQQSAAQ 871
>gi|406672721|ref|ZP_11079946.1| DNA mismatch repair protein MutS [Bergeyella zoohelcum CCUG 30536]
gi|405587265|gb|EKB60993.1| DNA mismatch repair protein MutS [Bergeyella zoohelcum CCUG 30536]
Length = 858
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 249/941 (26%), Positives = 429/941 (45%), Gaps = 155/941 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA----HLDHNFMT 142
KK TPL +Q +K KYPD +L+ VG + FG+DA A++LGI + N
Sbjct: 3 KKETPLMKQYNTIKAKYPDAILLFRVGDFYETFGQDAIKTAQILGITLTKRNNGSDNLEL 62
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A P ++ ++ +LV AG +V + Q E G RG++ L T
Sbjct: 63 AGFPHHSIDSYLPKLVRAGLRVAICDQLEDPK------SVKGIVKRGVTELVTPGVTFND 116
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ + ++ N+L+ V + G + G+ V++STG+ + E
Sbjct: 117 QVLNSKKN------NFLLSVHHEKG----------------KYGIAMVDVSTGEFMVSEG 154
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-RVECASRDCFIGGG 321
L ++ + P+E+L L YA N+ ++E + G
Sbjct: 155 TPEHLLH----IVSTFEPSEIL-------HQRSTQLPYALQHKNLFKLEDWAFQFSFG-- 201
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
YE + + +N+ GI MP A+ A +L +
Sbjct: 202 --------YEKLTQHFKTNSLKGF--------------GIEQMP-FAITASGAIFAYLVE 238
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGTLLHIMNHTLTIYG 440
++ + + + + A TL+ LE+L N+ +G +L++I++HT T G
Sbjct: 239 DTHHSLLSHITQVKKIPQDDFLMMDAFTLRNLEILSPNHPDGK---SLINIIDHTKTPMG 295
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R+LRR + PL VSEI + +++ + +SDVT QF
Sbjct: 296 GRMLRRRIILPL----------KVVSEI-------QRRQALVEFFYHHSDVTHQVQQFLS 338
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---MQAILYAGKQLQQLHIDGEYRE 557
+S D+ R + ++ P +F + ++ I Y L H + E
Sbjct: 339 AIS----------DLDRLVGKLAAEKLHPKDFGNLRESLRNIQYIRTLLLDYHDIPAWVE 388
Query: 558 KVTSKTLHSALLKRLI--LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
++ S L+ L L P + K +I G E
Sbjct: 389 PLSDL---SELIDYLDMHLNPELPVHLHKGN--------------------VICAGVSQE 425
Query: 616 VARARKAVQSAKEELDSLINMCRKQL---GMRNL--EFMSVSGITHLIELPANFKVPLNW 670
+ R Q+ K L+ MC++++ G+ +L +F +V G + KVP W
Sbjct: 426 LDELRALQQNGKGFLEE---MCQREIERTGISSLKIDFNNVFGYYIEVRNTHKDKVPEEW 482
Query: 671 AKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQAL 730
+ + RY + E+ +Q+ A + + ++ + + + + + Q+ +
Sbjct: 483 IRKQTLVSAERYITEELKKYENQILGAEDRIAVLEQELYRAVAQHTLNFIDIIQSNSHII 542
Query: 731 AALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLH 788
A +D +L+ L+ + + +P+ +E ++H+ + RHP+++ L + ++PND L
Sbjct: 543 AQIDIGTSLSELAITEGYTKPMI---NESYELHLKAARHPIIEKCLPLGEKYIPNDIFLD 599
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
E++ ++TGPNM GKS +RQVAL+ ++AQ+GS+VPA AE+ VLD I+TR+GASD+I
Sbjct: 600 REQQQIIMVTGPNMAGKSALLRQVALVALLAQMGSYVPAQHAEIGVLDKIFTRVGASDNI 659
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCM 907
G STF+ E+NEA+ IL N + +SL+++DE+GRGTST+DGV+IA+A +YL +H K
Sbjct: 660 SAGESTFMVEMNEAANILNNISDRSLILLDEIGRGTSTYDGVSIAWAIAEYLHQHPTKAK 719
Query: 908 VLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESS 967
LF THY ++ ++ F + +HVS ++ + +L K+VPG SE S
Sbjct: 720 TLFATHYHELNEMAVTFE-RIKNFHVSI-----------QENKGTIIFLRKLVPGGSEHS 767
Query: 968 FGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
FG VA+LA +P I RA+ I LE + + +N+ K+
Sbjct: 768 FGIHVAKLAGMPSQVIHRASEILKVLEGNRTQK-ENKKVKK 807
>gi|402832076|ref|ZP_10880739.1| DNA mismatch repair protein MutS [Capnocytophaga sp. CM59]
gi|402279428|gb|EJU28214.1| DNA mismatch repair protein MutS [Capnocytophaga sp. CM59]
Length = 855
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 256/924 (27%), Positives = 412/924 (44%), Gaps = 158/924 (17%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMTASIPTFR 149
+Q ++K KYPD LL+ VG + F EDA ++VLGI +N A P
Sbjct: 2 KQYNQIKAKYPDALLLFRVGDFYETFKEDAVKTSQVLGIVLTSRNNGSEDTSLAGFPYHA 61
Query: 150 LNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGE 209
LN ++ +LV AG++V + Q E + RG++ L T
Sbjct: 62 LNNYLPKLVKAGYRVAICDQLEDPKL------TKTIVKRGVTELVTPG------------ 103
Query: 210 DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR---LGVVAVEISTGDVVYGEFNDGF 266
V + DD + + R F + GV ++ISTG+ E +
Sbjct: 104 ----------VALSDD---ILQTRKNNFLASVWLHTPLCGVSFLDISTGEYYLAEGD--- 147
Query: 267 LRSGLEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDCF------ 317
++ +L + P E+L+ + K+ E Y G V E + +
Sbjct: 148 -IPCIDKLLQNFQPNEVLIAKKQRKEIEDAFGNGWHYFGLEDWVYKEDFAYEALTKQFQT 206
Query: 318 --IGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
+ G A+ ++ + + G +E Q+ Q H ++I I+N D V T
Sbjct: 207 NSLKGFAVEQLRQGWISAGAILHYLSETQH----HQLQHITSIRPIIN--DEYVWMDKFT 260
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
IR+L+ +G G SGS+ LL +++ T
Sbjct: 261 IRNLELYG-------GGQ----SGSV-------------------------GLLEVIDKT 284
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
LT GSR+LRRW+ PL + + I R V + + E V H
Sbjct: 285 LTPMGSRMLRRWLALPLTNLSQIQERHQVVQAL---VAHTELREQVRDH----------- 330
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEY 555
L + DI+R +++I TP E I + + L+A L+ + +
Sbjct: 331 -------------LHKVSDIERLLSKIATGKITPRELIYLKNS-LFAVLPLRAITLPN-- 374
Query: 556 REKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
E+V K L +R+ IG + + VN +L I G +E
Sbjct: 375 -EEVALKR----LFERICDLEELCERIGHTLEEDAPVN--------ILKGNTIRAGFSAE 421
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA--NFKVPLNWAKV 673
+ R S KE L+ L+ Q + +L+ S + + E+ KVP +W +
Sbjct: 422 LDELRNLSHSGKEYLNQLLEREIAQTHISSLKIDSNNVFGYYFEVRNVHKDKVPAHWVRK 481
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY S E+ +++ A E + + + + S ++E Y + Q A+ +
Sbjct: 482 QTLVNAERYISEELKEYEEKILHAQERIATLEQEYFASLIQEVIAYISPIQQTAIAIGEI 541
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAER 791
D L A L+ + + P D + I++ RHPV++ L ++ ND L ER
Sbjct: 542 DTLCGFALLATERQYTLPQLDDS---LVINLKEARHPVIEQQLPPTQPYIANDIYLDNER 598
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
+ +ITGPNM GKS +RQ ALI ++AQ+GSFVPA A++ ++D I+TR+GASD+I QG
Sbjct: 599 QQIMMITGPNMSGKSALLRQTALIVLLAQIGSFVPAKQAQIGIVDKIFTRVGASDNISQG 658
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLF 910
STF+ E+NEA+ IL N + +SL+++DE+GRGTST+DG++IA+A +YL EH LF
Sbjct: 659 ESTFMVEMNEAALILNNLSQRSLILLDEIGRGTSTYDGISIAWAIAEYLHEHPTHAKTLF 718
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ +++ +F + + VS +V G + +L K+V G SE SFG
Sbjct: 719 ATHYHELNEMQNEF-ARIKNFSVSV---KEVKG--------SILFLRKLVEGGSEHSFGI 766
Query: 971 KVAQLAQLPPSCISRATVIAAKLE 994
VA++A +PP I +A + KLE
Sbjct: 767 HVAKMAGMPPYVIEKAEKVLEKLE 790
>gi|374623823|ref|ZP_09696322.1| DNA mismatch repair protein MutS [Ectothiorhodospira sp. PHS-1]
gi|373942923|gb|EHQ53468.1| DNA mismatch repair protein MutS [Ectothiorhodospira sp. PHS-1]
Length = 870
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 257/917 (28%), Positives = 415/917 (45%), Gaps = 144/917 (15%)
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT 142
T+ +TP+ QQ +++K +PD+LL +G + F +DA AA++L I
Sbjct: 3 TSDLSSHTPMMQQYLKIKADHPDILLFYRMGDFYELFFQDATRAARLLDITLTRRGQSAG 62
Query: 143 ASIPTFRLNVH-----VRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGLSALYTK 196
IP + VH + RL+ G V + +Q + AA K GP R + + T
Sbjct: 63 EPIPMAGVPVHAAESYLARLLRLGESVAICEQVGDPAAAK-------GPVERKVVRIVTP 115
Query: 197 ATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
T+ D E+ N LVC+ K R + G+ +++++G
Sbjct: 116 GTVT---DEALLEER---RENLLVCL--------KARGE--------QTGLAILDLASGR 153
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDC 316
E L+ L L PAE+L+ E M L GP
Sbjct: 154 FQVQELKG---EEPLQGELERLQPAEILI-------PEDMRLP--GPER----------- 190
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
GG +E TL + D+ A G +MP LA+ A +
Sbjct: 191 ---GGVKRRAPWHFETEAARTLLTRQFGTRDL--------AGFGCDHMP-LAIGAAGALL 238
Query: 377 RHLKQF---GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
++ ++ L I L R + L A T + LE+ N S G + TL H+++
Sbjct: 239 QYAQETQKTALPHIDGLSVQRRDDG----IILDAATRRNLELTTNLSGGRD-NTLAHVLD 293
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T GSRLL RW+ PL DR ++ R A+S + ++ R E +
Sbjct: 294 QAATAMGSRLLARWLHQPLRDRRILKGRHGAISALLDT----RAFEQI------------ 337
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+PQ L +G D++R +TRI +A P + + ++ L LQQ
Sbjct: 338 -QPQ--------LRGIG---DLERILTRIALGSARPRD-LTTLRDSLAELPALQQ----- 379
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNG 611
TLH RL A IG+ +++ + + DQ +L + +I+ G
Sbjct: 380 ---------TLHPLRAVRLRELAEG---IGEHPRVVDLLRRAVIDQPPVLIRDGGVIAQG 427
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLN 669
+E+ R ++A + L L R++ G+ NL+ + V G I + + P +
Sbjct: 428 YDAELDELRALSENADQFLLDLEQRERERTGIHNLKVAYNRVHGYYIEISRGQSDRAPDD 487
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + K R+ +PE+ D++ A E + +++ L + + + + +A
Sbjct: 488 YTRRQTLKGAERFITPELKRFEDKVLSARERALAREKQLYEALLTQLHAPLPDLRRSAEA 547
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHA 789
LA LD L LA + + + P D +P + I GRHPV++ +L + FVPND L
Sbjct: 548 LAELDVLANLAERADSLDLTAPELTD--QP-GVRIEDGRHPVVERVLDEPFVPNDLTLDP 604
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+R +ITGPNMGGKS Y+RQ ALI +MA VGSFVPA A + +D I+TR+GASD +
Sbjct: 605 KRRML-VITGPNMGGKSTYMRQAALIVLMAHVGSFVPARRALIGPVDRIFTRIGASDDLA 663
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
GRSTF+ E+ EA+ IL + T SLV++DE+GRGTST DG+++A+A ++L + L
Sbjct: 664 SGRSTFMVEMTEAANILNHATEHSLVLMDEIGRGTSTFDGLSLAFACAEHLATRNRAFCL 723
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ + ++ ++ H+ + + + +L+ V G + S+G
Sbjct: 724 FATHYFELTALPDQYP-TIANVHIDAV-----------EHGDRIVFLHAVKEGPANQSYG 771
Query: 970 FKVAQLAQLPPSCISRA 986
VA LA +P + I RA
Sbjct: 772 LHVAALAGVPKAVIRRA 788
>gi|53723768|ref|YP_103293.1| DNA mismatch repair protein MutS [Burkholderia mallei ATCC 23344]
gi|254200246|ref|ZP_04906612.1| DNA mismatch repair protein MutS [Burkholderia mallei FMH]
gi|81685054|sp|Q62J26.1|MUTS_BURMA RecName: Full=DNA mismatch repair protein MutS
gi|189030772|sp|A3ML57.2|MUTS_BURM7 RecName: Full=DNA mismatch repair protein MutS
gi|189030773|sp|A2SAW7.2|MUTS_BURM9 RecName: Full=DNA mismatch repair protein MutS
gi|189030774|sp|A1V5I2.2|MUTS_BURMS RecName: Full=DNA mismatch repair protein MutS
gi|52427191|gb|AAU47784.1| DNA mismatch repair protein MutS [Burkholderia mallei ATCC 23344]
gi|147749842|gb|EDK56916.1| DNA mismatch repair protein MutS [Burkholderia mallei FMH]
Length = 891
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 256/927 (27%), Positives = 412/927 (44%), Gaps = 136/927 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 19 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 78
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 79 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 132
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 133 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 176
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 177 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 226
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 227 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 269
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 270 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 316
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 317 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 353
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ ++ A L RE+V
Sbjct: 354 --LDSLRSALRQIADVERITGRLALLSARPRD-LSSLRDTFAALPAL---------RERV 401
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 402 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 453
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 454 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 513
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 514 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 573
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 574 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKL 629
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 630 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 688
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 689 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 748
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 749 YFELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 796
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
QLA +P I A A LE + +++
Sbjct: 797 QLAGVPAPVIRAARKHLAHLEQQSAAQ 823
>gi|146297052|ref|YP_001180823.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|172046026|sp|A4XL47.1|MUTS_CALS8 RecName: Full=DNA mismatch repair protein MutS
gi|145410628|gb|ABP67632.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 863
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 239/943 (25%), Positives = 438/943 (46%), Gaps = 147/943 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL-----DHNFMTAS 144
TP+ QQ +E+K + D +L +G + F +DA +A+K L I +
Sbjct: 5 TPMMQQYMEIKQRVKDCILFFRLGDFYEMFFDDAIIASKELEIALTARDCGNNEKAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + ++ +L+ G+KV + +Q E + G R ++ + T T
Sbjct: 65 VPYHSAHSYIAKLIEKGYKVAICEQVEDPKLAK------GVVKREITRIITPGTF----- 113
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
++ +N++ CV + + + V+ISTG E
Sbjct: 114 ---IDENFSKANNFICCVARVESD----------------FALTFVDISTG-----EMYA 149
Query: 265 GFLRSGLEAVLLSLS---PAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ + ++ ++ +S P+E+L+ ++ E + Y + F+
Sbjct: 150 CLIENDIQKMINEISKYAPSEILISHLDNELYEVIRENY--------------NSFVQRI 195
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
E+ Y+ + D+ M + N + A+ + N+ + V ++ ++K+
Sbjct: 196 EFIEIDRCYDLI---------DKQMQIT-NINDKVAL-SVGNLLNYLVDTQKISFNYIKK 244
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
F F + +++ LS T + LE+ + S+ +L I++ T GS
Sbjct: 245 F----------EFYRVQNYLQIDLS--TKRNLELTESIIARSKKNSLFGILDQAKTSMGS 292
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RL+++W+ PL D I+ RLDAV E+ + + +
Sbjct: 293 RLIKKWLERPLIDVVEINRRLDAVEELYNN---------------------------FPL 325
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L + L DI+R ++ +++ + +++ ++I + + L GE++
Sbjct: 326 LMQIEGLLEGIYDIERLSSKFAYKSINAKDLLSLKKSIEVLPRLKELL---GEFK----- 377
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARK 621
S LLK L + + L+ + E A G L II +G V R R
Sbjct: 378 ----SPLLKEL---YNELDTLEDVYSLIDSSINEDAPVG-LKEGGIIKDGFNDHVDRLRN 429
Query: 622 AVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNSTKKT 679
+++KE L R G++NL+ + IE+ +N+ VP + + +
Sbjct: 430 ISKNSKELLIQYEEKERNLTGIKNLKIGYNKVFGYYIEVTKSNYSLVPERYIRKQTLANA 489
Query: 680 IRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL 739
RY + E+ D++ A ++L + + + Q +A +D L +
Sbjct: 490 ERYVTEELKKLEDEIINAEQKLVELEYELFCQIRDKIESQIERIQKTASCIAIIDALCSF 549
Query: 740 ATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQII 797
A ++ + + +P V++ D +I+I +GRHPV++ ++ NFVPNDT L ++ II
Sbjct: 550 AHIAIDNRYTKPIVYLGD----RIYIKNGRHPVVEKMIGYSNFVPNDTELDNDQNRVLII 605
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNM GKS Y+RQVALI IMAQ+G FVPA A++ ++D I++R+GASD I G+STF+
Sbjct: 606 TGPNMAGKSTYMRQVALIVIMAQMGCFVPAEEAQIGIVDKIFSRIGASDDISSGQSTFMV 665
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVTHYP 915
E++E + IL+N T +SL+I DE+GRGTST+DG++IA+A L+++ + K LF THY
Sbjct: 666 EMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEFVADKSKIGAKTLFATHYH 725
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD-QDVTYLYKVVPGVSESSFGFKVAQ 974
++ +++ K +G V Y V D K + +++ +L K+V G +SS+G VA+
Sbjct: 726 ELTELEEKISG-VKNYRV------------DVKEEGKNIIFLRKIVRGGCDSSYGIHVAR 772
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1017
LA +P + RA I KLE +R + + ++++ + ++Q
Sbjct: 773 LAGIPEEVLQRAEQILKKLEEADINRKEAKRLRKEIKREFTEQ 815
>gi|373460577|ref|ZP_09552328.1| DNA mismatch repair protein mutS [Prevotella maculosa OT 289]
gi|371955195|gb|EHO72999.1| DNA mismatch repair protein mutS [Prevotella maculosa OT 289]
Length = 887
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 181/581 (31%), Positives = 305/581 (52%), Gaps = 74/581 (12%)
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+LL++++ T+T G R+LRRW+ PL D I+ RLD V
Sbjct: 301 SLLNVIDKTVTAMGGRMLRRWLVFPLKDVFPITERLDIV--------------------- 339
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
D +P+F +++ L +G D++R I+++ +P E + + A L A + +
Sbjct: 340 ---DYFFQKPEFRQLINEQLHRVG---DLERIISKVAVGRVSPREVVQLRNA-LDAVRPI 392
Query: 547 QQ--LHIDGEYREKVTSKTLHSALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGD 601
++ L+ + E +++ + +K I + P +I K GD
Sbjct: 393 KEACLYAENEALKRIGEQLNLCESIKNRIEKEIQPDPPQLIAK---------------GD 437
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
+I++G E+ R +++K+ + ++ ++ G+ +L+ + + +E+
Sbjct: 438 -----VIADGCNEELDELRALSKNSKDYVLNIQEREAEKTGITSLKVGYNNVFGYYLEVR 492
Query: 662 ANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGY 719
FK VP W + + + RY + E+ D++ A+E++ + + + +
Sbjct: 493 NTFKSKVPNTWVRKQTLAQAERYITQELKEYEDKILGADEKILALEARLFSELILAMQDF 552
Query: 720 YAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL-- 777
+ Q LA +DCL + A S + ++RPV +DD E + I GRHPV++T L
Sbjct: 553 IPQIQINANLLARIDCLLSFAKTSEDNGYIRPV-IDDSEVIDIR--QGRHPVIETQLPLG 609
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
+ +VPND L E++ +ITGPNM GKS +RQ ALI ++AQVG FVPA A + ++D
Sbjct: 610 ERYVPNDVYLDTEKQQVMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAERANIGLVDK 669
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GASD+I G STF+ E+ EAS IL N +++SLV+ DELGRGTST+DG++IA+A +
Sbjct: 670 IFTRVGASDNISLGESTFMVEMTEASNILNNVSSKSLVLFDELGRGTSTYDGISIAWAIV 729
Query: 898 DYLLEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
+YL E K LF THY ++ +++ F + Y+VS + D + +
Sbjct: 730 EYLHEQPKARARTLFATHYHELNEMEKNFH-RIKNYNVSV-----------KEIDGKIIF 777
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
L K++ G SE SFG VA++A +P S + RA VI +LEA+
Sbjct: 778 LRKLMKGGSEHSFGIHVAEIAGMPRSIVKRANVILKELEAD 818
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----- 139
++K TP+ +Q +K K+P L++ G + +GEDA ++A +LGI +N
Sbjct: 4 NDKGLTPMMKQFFSMKAKHPGALMLFRCGDFYETYGEDAVVSAGILGITLTKRNNSAENS 63
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG-PGKAG------PFGRGLSA 192
A P L+ ++ +L+ AG +V + Q E K GK G RG++
Sbjct: 64 VEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKKKREQIKGKKGLTEMDKMVKRGITE 123
Query: 193 LYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
L T A D E+N+L V + GK GV ++I
Sbjct: 124 LVTPGV--AMTDTVLNYK----ENNFLAAV-----HFGK-----------ASCGVSFLDI 161
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKML 297
STG+ + GE + + +E +L + P E+L + K E+
Sbjct: 162 STGEFLTGEGSYDY----VEKMLGNFQPKEVLYNREHKKDFERFF 202
>gi|254191438|ref|ZP_04897942.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei Pasteur
52237]
gi|157939110|gb|EDO94780.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei Pasteur
52237]
Length = 938
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 256/927 (27%), Positives = 409/927 (44%), Gaps = 136/927 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 67 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 126
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 127 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 180
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 181 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 224
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 225 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 274
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 275 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 317
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 318 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 364
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 365 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 401
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 402 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 449
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 450 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 501
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 502 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 561
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 562 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 621
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 622 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKL 677
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 678 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 736
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 737 TFMVEMTEAAAILNGATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 796
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 797 YFELTQLPVEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 844
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
QLA +P I A A LE + +++
Sbjct: 845 QLAGVPAPVIRAARKHLAHLEQQSAAQ 871
>gi|358067399|ref|ZP_09153878.1| DNA mismatch repair protein MutS [Johnsonella ignava ATCC 51276]
gi|356694315|gb|EHI55977.1| DNA mismatch repair protein MutS [Johnsonella ignava ATCC 51276]
Length = 879
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 243/938 (25%), Positives = 427/938 (45%), Gaps = 172/938 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ +Q ++ K +YP+ +L +G + F EDA++A+K L G L+
Sbjct: 5 TPMMKQYLKTKEEYPECILFYRLGDFYEMFFEDAKLASKELELTLTGKDCGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P V++ +LV G+KV + +Q E + G R + + T T+ ++
Sbjct: 65 VPYHSAEVYLDKLVLKGYKVAIAEQVEDPKLAK------GLVKREVVRIVTPGTITSSN- 117
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
V+ DD N + + F G+ AV+ISTGD
Sbjct: 118 -----------------VLKDDKNNYLLSISYLSNHF----GIAAVDISTGD-------- 148
Query: 265 GFLRSGLEAV------LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
F + ++V + SP+E++ T ++
Sbjct: 149 -FFVTQADSVHELYDEISRYSPSEVICNHAFKISTAEL---------------------- 185
Query: 319 GGGALAEVMSLYENMGEDTLSN---NEDQNMDVPEQGNHRSAIE--GIMNMPDLAVQALA 373
+V+ G L + NE + ++ + + SA E G MP+ + A A
Sbjct: 186 ------DVLKNQYGFGISFLDDQYYNEKECRNIISRQFNISAGERPGFFAMPEGIISAGA 239
Query: 374 LTIRHLKQFGLERIMCLG-ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+R+L + ++ C S S M + A + + LE+ +YG+LL ++
Sbjct: 240 -ALRYL--YETQKSSCPNIQSINYYSCGEYMIMDAGSKRNLELFETMREKKKYGSLLWVI 296
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+ T T G+RLLR ++ PL + + I R ++V AE + Y + +G++
Sbjct: 297 DKTRTAMGARLLRSYIEQPLINTDAIEKRHESV---AEFLDRYIDRQELGEY-------- 345
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI-----------LY 541
LSSV D++R I RI A + +A+ ++ +
Sbjct: 346 ---------LSSVY-------DLERLIGRISSGLAGTKDMLALAASLKMLPHIKNIINTF 389
Query: 542 AGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
+ + + L+ D + E V +S ++ +PA++ +
Sbjct: 390 SSRLICSLNQDFDVLEDVYELIFNS-------ISEDAPALLKEGG--------------- 427
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP 661
II +G E+ + R A K L L RK+ G++ L+ + E+
Sbjct: 428 -----IIKSGYSDEIDKLRSAGSEGKNWLAKLETKERKKTGIKTLKIKYNKVFGYYFEVT 482
Query: 662 ANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQLAL-ANEELTIVCRAAWDSFLKEFGG 718
++K VP + + + RY + E L +++L L AN +L + + ++ ++
Sbjct: 483 NSYKASVPDYFIRRQTLANAERYTTTE-LAEIEELILGANGKLIELEYSVFNLIREKTAA 541
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
A QA+ + +AA D L + A + N+V+P + I I GRHPV++ ++ +
Sbjct: 542 QVARIQASAKTIAAFDVLISFANAAYKYNYVKPSI---NSKGIISIKEGRHPVVERMIKN 598
Query: 779 N-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
F+ NDT L + IITGPNM GKS Y+RQ ALI +MAQ+G+FVPA SA++ + D
Sbjct: 599 EAFIANDTFLDNAKNRMGIITGPNMAGKSTYMRQNALIVLMAQIGAFVPAKSADICICDR 658
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
I+TR+GASD + G+STF+ E+NE + IL+N T S +I+DE+GRGTST DG++IA+A +
Sbjct: 659 IFTRVGASDDLGSGQSTFMVEMNEVADILKNATKNSFIILDEIGRGTSTFDGLSIAWAVV 718
Query: 898 DYLLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
+++ K LF THY ++ +++ +G V Y + + +S ++T+
Sbjct: 719 EHISNTKILGAKTLFSTHYHELTELEGSISG-VNNYCI-----------LVKESGDNITF 766
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
L K++ G ++ S+G +VA+LA +P + I RA + +L
Sbjct: 767 LRKIIKGGADKSYGIQVAKLAGIPENVIKRAKELLEEL 804
>gi|227326559|ref|ZP_03830583.1| DNA mismatch repair protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 840
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 256/934 (27%), Positives = 401/934 (42%), Gaps = 184/934 (19%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTASIPTF 148
QQ LK ++P++LL +G + F +DA+ A+++L I A A +P
Sbjct: 3 QQYFRLKAEHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
+ ++ RLV G V + +Q A GP R + + T T+ +
Sbjct: 63 AVENYLARLVQMGESVAICEQIGDPATSK------GPVERKVVRIVTPGTISDEALLQEK 116
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D N L + D G GF G ++IS+G E D R
Sbjct: 117 QD------NLLAAIWQD------------GRGF----GYATLDISSGRFRVSEPAD---R 151
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMS 328
+ A L +PAELL + E M
Sbjct: 152 ETMAAELQRTNPAELLYPESF-----------------------------------ESMD 176
Query: 329 LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI--RHLKQFGLER 386
L EN G R + PD A Q L L R L FG+E+
Sbjct: 177 LIEN-----------------RHGLRRRPLWEFE--PDTARQQLNLQFGTRDLTGFGVEQ 217
Query: 387 IM-------CL--------GASFRSLSG-SME-----MTLSANTLQQLEVLRNNSNGSEY 425
CL S + G +ME + + A T + LE+ +N S G E
Sbjct: 218 AKLALRAAGCLLQYAKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQNLSGGVE- 276
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
TL +++ T+T GSR+L+RW+ P D + R A+S + +
Sbjct: 277 NTLAAVLDCTVTAMGSRMLKRWIHMPSRDIEALKQRQQAISALQD--------------- 321
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
I + SL + D++R + R+ RTA P + + A
Sbjct: 322 ---------------IAPDLQPSLRQVGDLERILARLALRTARPRDLARMRHA------- 359
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL-- 603
QQ + RE++ L + ++RL+ ++IG+ +L + + + +L
Sbjct: 360 FQQF---PDIREQLAP--LDTDSVRRLV------SLIGQFDELRDLLERAVVEAPPVLVR 408
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELP 661
+ +I+ G +E+ R A + LD L R++LG+ L+ F V G +
Sbjct: 409 DGGVIAPGYHAELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRG 468
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+ VP+++ + + K RY PE+ D++ + + + +A +D + A
Sbjct: 469 QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYDELFDLLLPHLA 528
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E Q + ALA LD L LA + N+V P D I I GRHPV++ +L + F+
Sbjct: 529 ELQQSAAALAELDVLTNLAERADTLNYVCPTLSDKS---GIKITGGRHPVVEQVLREPFI 585
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
N +L +R IITGPNMGGKS Y+RQ ALI +MA +G FVPA A + +D I+TR
Sbjct: 586 SNPLSLAPQRRML-IITGPNMGGKSTYMRQAALIVLMAHIGCFVPADQAVIGPVDRIFTR 644
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A + L
Sbjct: 645 VGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLA 704
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVV 960
K M LF THY ++ + K G V + +D++ D + +++ V
Sbjct: 705 NRIKAMTLFATHYFELTTLPEKMEGVVNVH-------------LDAREHGDTIAFMHSVQ 751
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
G + S+G VA LA +P I RA +LE
Sbjct: 752 DGAASKSYGLAVAALAGVPKEVIKRARQKLKELE 785
>gi|92087043|sp|Q3JQS6.2|MUTS_BURP1 RecName: Full=DNA mismatch repair protein MutS
Length = 890
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 256/927 (27%), Positives = 410/927 (44%), Gaps = 136/927 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 19 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 78
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 79 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 132
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 133 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 176
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 177 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 226
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 227 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 269
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 270 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 316
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 317 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 353
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 354 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 401
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 402 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 453
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 454 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 513
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 514 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 573
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 574 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKL 629
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 630 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 688
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 689 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 748
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 749 YFELTQLPVEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 796
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
QLA +P I A A LE + +++
Sbjct: 797 QLAGVPAPVIRAARKHLAHLEQQSAAQ 823
>gi|296132996|ref|YP_003640243.1| DNA mismatch repair protein MutS [Thermincola potens JR]
gi|296031574|gb|ADG82342.1| DNA mismatch repair protein MutS [Thermincola potens JR]
Length = 882
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 195/601 (32%), Positives = 305/601 (50%), Gaps = 71/601 (11%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
M L +T + LE+ R + S GTLL ++++T T G RLL+ W+ PL D I RL
Sbjct: 270 MLLDPSTRRNLELTRTIRDSSRKGTLLWVLDYTQTAMGGRLLKTWLEQPLTDITAIETRL 329
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
D V E+ ++ D+ + + Y D++R RI
Sbjct: 330 DTVEELVNNVFM-------------RGDLQKLFTEVY--------------DLERLAGRI 362
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
+A + IA+ K LQ L E EK S L L ++L + ++I
Sbjct: 363 AFGSANARDLIALK-------KSLQVLPKVKEILEKAYSPGLIQ-LYRQLDILEDVASLI 414
Query: 583 GKAAKLLSTVNKEAADQGDLLNLM---IISNGQFSEVARARKAVQSAKEELDSLINMCRK 639
+ A D + L II G E+ R RKA + K + L ++
Sbjct: 415 -----------ESAIDDNPPITLRDGGIIKKGYNEEIDRLRKASRDGKTWIAELERREKE 463
Query: 640 QLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLAL- 696
+ G+++L+ + IE+ AN VP ++ + + R+ +P+ L + L L
Sbjct: 464 RTGIKSLKVGYNKVFGYYIEVTRANLDAVPDDYIRKQTLANAERFITPD-LKEYESLILG 522
Query: 697 ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDD 756
A E++T + + + ++ A Q A +A LD A A + N+ +P+ DD
Sbjct: 523 AEEKITQLEYELFQAVREKISNSTARIQQAASIVAQLDVYIAFAEAAIRNNYTKPIINDD 582
Query: 757 HEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALI 815
I I GRHPV++ + + +FVPNDT L IITGPNM GKS Y+RQVALI
Sbjct: 583 G---IIKITDGRHPVVEKFMPEGSFVPNDTYLDCSGYRMDIITGPNMAGKSTYMRQVALI 639
Query: 816 GIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLV 875
+MAQ+GS+VPAS A + ++D I+TR+GASD + G+STF+ E+NE + IL N TA+SL+
Sbjct: 640 VLMAQIGSYVPASEARIGIVDRIFTRVGASDDLATGQSTFMVEMNEVANILNNATAKSLI 699
Query: 876 IVDELGRGTSTHDGVAIAYATLDYLLEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHV 933
I+DE+GRGTST DG++IA+A +Y+L+ +K LF THY ++ ++ + G
Sbjct: 700 ILDEVGRGTSTFDGLSIAWAVAEYILDPEKIGAKTLFATHYHELTELADIYPG------- 752
Query: 934 SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
+ +H + + K D D+ +L K++PG ++ S+G +VA+LA LP + +A I L
Sbjct: 753 --VQNHNI--AVKEKGD-DIIFLRKIIPGGADRSYGIQVARLAGLPGEVLGKAKEILRTL 807
Query: 994 E 994
E
Sbjct: 808 E 808
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 35/212 (16%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL-----DHNFMTA 143
YTP+ QQ +E+K++YPD +L +G + F EDAE A+K L I D
Sbjct: 4 YTPMIQQYLEIKSQYPDAILFFRLGDFYEMFFEDAEKASKELEITLTARDGGNDKKVPMC 63
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAA 202
+P ++ +L+N G+ V + +Q E PG A G R + + T T+
Sbjct: 64 GVPFHAATTYIAKLINKGYNVAICEQVE-------DPGAAKGIVKREVIRVITPGTV--L 114
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
E+ E ++N+L+ V DD FG G+ ++STG E
Sbjct: 115 EENMLDEK----QNNFLIAVNKDD----------FG------YGLAVADVSTGYFAVTEL 154
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE 294
+ L + L P E L+ L K +
Sbjct: 155 RGAKALNQLIDEISRLQPVECLIPDNLVKNMD 186
>gi|167895004|ref|ZP_02482406.1| DNA mismatch repair protein [Burkholderia pseudomallei 7894]
gi|217420488|ref|ZP_03451993.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 576]
gi|217395900|gb|EEC35917.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 576]
Length = 939
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 256/927 (27%), Positives = 410/927 (44%), Gaps = 136/927 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 67 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 126
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 127 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 180
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 181 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 224
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 225 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 274
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 275 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 317
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 318 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 364
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 365 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 401
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 402 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 449
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 450 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 501
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 502 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 561
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 562 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 621
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 622 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKL 677
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 678 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 736
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 737 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 796
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 797 YFELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 844
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
QLA +P I A A LE + +++
Sbjct: 845 QLAGVPAPVIRAARKHLAHLEQQSAAQ 871
>gi|53719861|ref|YP_108847.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei K96243]
gi|418382638|ref|ZP_12966579.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 354a]
gi|418552939|ref|ZP_13117782.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 354e]
gi|81690299|sp|Q63SR9.1|MUTS_BURPS RecName: Full=DNA mismatch repair protein MutS
gi|52210275|emb|CAH36254.1| DNA mismatch repair protein [Burkholderia pseudomallei K96243]
gi|385372348|gb|EIF77466.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 354e]
gi|385377167|gb|EIF81780.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 354a]
Length = 890
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 256/927 (27%), Positives = 410/927 (44%), Gaps = 136/927 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 19 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 78
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 79 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 132
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 133 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 176
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 177 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 226
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 227 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 269
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 270 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 316
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 317 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 353
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 354 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 401
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 402 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 453
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 454 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 513
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 514 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 573
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 574 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKL 629
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 630 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 688
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 689 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 748
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 749 YFELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 796
Query: 974 QLAQLPPSCISRATVIAAKLEAEVSSR 1000
QLA +P I A A LE + +++
Sbjct: 797 QLAGVPAPVIRAARKHLAHLEQQSAAQ 823
>gi|365959941|ref|YP_004941508.1| DNA mismatch repair protein MutS [Flavobacterium columnare ATCC
49512]
gi|365736622|gb|AEW85715.1| DNA mismatch repair protein MutS [Flavobacterium columnare ATCC
49512]
Length = 874
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 266/973 (27%), Positives = 433/973 (44%), Gaps = 190/973 (19%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
K TPL +Q E+K KYPD L+ VG + FGEDA A++LGI + +
Sbjct: 9 KETPLMKQYNEIKAKYPDACLLFRVGDFYETFGEDAVRTARILGITLTKRGSGTESETAL 68
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A P LN ++ +LV AG +V + Q E + RG++ L T
Sbjct: 69 AGFPHHSLNTYLPKLVKAGLRVAICDQLEDPKMTK------TIVKRGVTELVTPG----- 117
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
V ++ +SN + V FG +LGV +++STG+ + E
Sbjct: 118 --VSMNDEVLMSKSNNFLASV------------YFGKK---QLGVAFLDVSTGEFLTSEG 160
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
N ++ + +L + +P+E+L + KQ +K
Sbjct: 161 NADYV----DKLLQNFNPSEIL----VPKQNKK--------------------------- 185
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA--LTIRHLK 380
E + L+ GE+ H +E + D A ++L LK
Sbjct: 186 --EFVGLF---GENF----------------HAFYLEDWVYKQDYATESLINHFQTNSLK 224
Query: 381 QFGLER----IMCLGASFRSLSGSME-----------------MTLSANTLQQLEVLRN- 418
FG+E ++ GA LS + + + T++ LE+ +
Sbjct: 225 GFGIEELEHGVIASGAILYYLSETQHNKIQHITSIHRIAEDAYVWMDRFTIRNLELYHSY 284
Query: 419 NSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTS 478
N N TLL +++ TL+ G RLL+RW+ PL D N I R + V G ++ +
Sbjct: 285 NPNAV---TLLDVIDRTLSPMGGRLLKRWLALPLKDINKIKGRHEVV-------GYFKDN 334
Query: 479 ESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQA 538
+ +L V + + D++R I+++ +P E + + +
Sbjct: 335 QD--------------------LLCQVQQQIKQISDLERLISKVAAGRVSPRELVYLKDS 374
Query: 539 ILYAGKQLQQLHIDGEYRE-KVTSKTLHSA-LLKRLI---LTASSPAVIGKAAKLLSTVN 593
L A + ++ L + KV +LH+ LL+ I L +P I K + VN
Sbjct: 375 -LDAIEPVKTLALKSTQEAVKVIGDSLHACELLREKISNTLNPDAPVAINKGNAIALGVN 433
Query: 594 KEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSG 653
+E D L + S +F E R +S K + SL + F +V G
Sbjct: 434 EEL----DELRNISSSGKEFLEAIEKR---ESEKTGIPSL-----------KISFNNVFG 475
Query: 654 ITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
+ KVP W + + RY + E+ ++ A E++ + + ++ +
Sbjct: 476 YYIEVRNTHKDKVPSEWIRKQTLVNAERYITEELKEYESKILGAEEKIHQLEMSLFEQLV 535
Query: 714 KEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD 773
Y Q +A LDCL + A + N+V P D + + I +GRHPV++
Sbjct: 536 TWVATYIKPVQHNANLIAQLDCLTSFAQQAIENNYVCPEINDTY---VLDIKNGRHPVIE 592
Query: 774 TILLDN--FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
L ++ ND L + + +ITGPNM GKS +RQ ALI ++AQ+GSFVPA +
Sbjct: 593 KQLPIGVPYIANDVYLDRDLQQVVMITGPNMSGKSAILRQTALIVLLAQMGSFVPAEAVT 652
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
+ V+D I+TR+GASD+I G STF+ E+NE + IL N + +SLV++DE+GRGTST+DGV+
Sbjct: 653 MGVVDKIFTRVGASDNISMGESTFMVEMNETASILNNISNRSLVLLDEIGRGTSTYDGVS 712
Query: 892 IAYATLDYLLEH-KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
IA+A ++L E+ + LF THY ++ ++ T + Y+VS +
Sbjct: 713 IAWAIAEFLHENPAQPKTLFATHYHELNEMTETLT-RIQNYNVSV-----------KELK 760
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN-RSAKRD 1009
+V ++ K+ G S SFG VA++A +P + I RA I KLE SS V N ++A+ +
Sbjct: 761 DNVLFIRKLEKGGSAHSFGIHVAKMAGMPQTVIQRAGKILKKLEKNHSSEVLNGKTAQGN 820
Query: 1010 LLVKLSDQEQEAQ 1022
L ++E+E Q
Sbjct: 821 ----LGNEEEEMQ 829
>gi|167001781|ref|ZP_02267573.1| DNA mismatch repair protein MutS [Burkholderia mallei PRL-20]
gi|243062469|gb|EES44655.1| DNA mismatch repair protein MutS [Burkholderia mallei PRL-20]
Length = 939
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 253/923 (27%), Positives = 410/923 (44%), Gaps = 128/923 (13%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 67 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 126
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 127 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 180
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 181 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 224
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 225 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 274
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 275 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 317
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 318 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 364
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 365 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 401
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ ++ A L RE+V
Sbjct: 402 --LDSLRSALRQIADVERITGRLALLSARPRD-LSSLRDTFAALPAL---------RERV 449
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
++A L R P V L T A + + +I+ G +E+
Sbjct: 450 AEIASNAAALGRFEAALEPPPVCLD----LPTRAIAAEPAAMVRDGGVIARGYDAELDEL 505
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNSTK 677
R ++ + L L R + G+ NL E+ V G + KVP ++ + + K
Sbjct: 506 RDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLK 565
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
RY +PE+ T D+ A E RA +D L+ + Q LA LD L
Sbjct: 566 NAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAELDLLA 625
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQII 797
A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+ +I
Sbjct: 626 AFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKLL-LI 680
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRSTF+
Sbjct: 681 TGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMV 740
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF THY ++
Sbjct: 741 EMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHYFEL 800
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
+ +F + + + H ++ +L+ V G + S+G +VAQLA
Sbjct: 801 TQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVAQLAG 848
Query: 978 LPPSCISRATVIAAKLEAEVSSR 1000
+P I A A LE + +++
Sbjct: 849 VPAPVIRAARKHLAHLEQQSAAQ 871
>gi|270014976|gb|EFA11424.1| hypothetical protein TcasGA2_TC013601 [Tribolium castaneum]
Length = 1085
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 274/988 (27%), Positives = 444/988 (44%), Gaps = 125/988 (12%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P P TL IP + +K TP +Q LK+ + D +L +VG + +
Sbjct: 151 RRPDDPDYDPRTLY-IPQ-----SFLEKQTPAMRQWWVLKSTHMDSVLFFKVGKFYELYH 204
Query: 121 EDAEMAAKVLG---IYAHLDHN--FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTET--- 172
DA + LG + A H F + P + L+ GFKV +QTET
Sbjct: 205 MDAVVGVTQLGFSYMKAFPSHTGEFAHSGFPESAYHKMANALIEKGFKVARTEQTETPEM 264
Query: 173 AAIKAHGPGKAGPF----GRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN 228
A + G+A F R + + TKAT + D +S Y+ + + D
Sbjct: 265 MAERCKKQGRATKFDKVVNREICQISTKATCVYTAQL---PDAMHSQSCYMYAIAEKDVT 321
Query: 229 VGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP 288
G R G+ ++ S G EF+D S L V LS P L+L +
Sbjct: 322 -----------GSQRRFGICFIDTSIGVFKLAEFDDDKHCSKL-LVCLSEYPPGLILTE- 368
Query: 289 LSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
K + K+ L +VR E + + G + + E + NE ++ +
Sbjct: 369 RKKLSSKLKLILNTNYRDVRRESLAPESQFYGAS-----TTIEKLLNGNYFRNESNDLCL 423
Query: 349 PEQGNHRSAIEGIMNMPD--LAVQALALTIRHLKQFGLE-RIMCLGA---------SFRS 396
PE ++ +G P+ L V+AL + +L L+ +++ LG + R
Sbjct: 424 PEV--LKNVTDGYNAKPEFELMVKALGGCLWYLHDSKLDIQVVSLGKFEIYQPLEMNVRE 481
Query: 397 LSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRN 456
S M L + T+ L +L E +L +++ T +G RLL +W+ PLC
Sbjct: 482 KSPRSCMILDSVTIVNLNLL------GEENSLQKTLDYCQTAFGKRLLTQWICRPLCVVE 535
Query: 457 LISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQ 516
I R +AV E+ ++ + ++ V L + PD++
Sbjct: 536 KIKERQEAVQELVKNTSLLKDAQDV---------------------------LKKLPDLE 568
Query: 517 RGITRI------FHRTATPSEFIAVMQAILYAGKQLQQL--HIDG-EYREKVTS--KTLH 565
R + +I F P +A Y+ +++ L + G E + + K
Sbjct: 569 RQLAKIHTYGNKFFAQDHPDSRAVFYEAATYSKRRIGDLLKTLQGFELAQNLCPLFKGCQ 628
Query: 566 SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN--LMIISNGQFSEVARARKAV 623
S+LLKRL + LL K A DQ + +I G +A+ A+
Sbjct: 629 SSLLKRLTQFKPDGHYVDLTELLL--FFKHAFDQEEAQKEGKIIPKPGVDENYDQAQDAI 686
Query: 624 QSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANFKVPLNWAKVNSTKK---- 678
++ ++LD + ++ G + + + I++P ++ K + ++ TKK
Sbjct: 687 KAVTKKLDEYLVELQQFFGCK-VTYFGSDKKRFQIDIPESHTKKVTSEYQLEGTKKGAKP 745
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHA 738
+ RY + L ++ A E V + ++F +++ A+ + LD L +
Sbjct: 746 SKRYSTSRSRQLLAEMMKAESERAKVIQDLNRRIFQKFSEKREQWEQAIDCITVLDVLCS 805
Query: 739 LATLSRNKNFVRPVFVDDHEPV----QIHICSGRHPVLDTILLDNFVPNDTNLH-AEREY 793
LA + NF + + + + EP+ +I I +GRHP + I DNFVPNDT + A+
Sbjct: 806 LAQYA--CNFGQDICIPEIEPMGNSDKIVIENGRHPCITNI--DNFVPNDTKMGVADFAN 861
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS +RQ+A+I IMA +G +VPAS L ++D I+TR+GA D I QG+S
Sbjct: 862 ILLITGPNMGGKSTLMRQIAIICIMAHMGGYVPASGCTLSLIDRIFTRLGAHDDIVQGQS 921
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TFL EL+EA+ +L + T SLV++DELGRGTSTHDG AIA A ++ L C LF TH
Sbjct: 922 TFLVELSEAAVMLHHATPHSLVLLDELGRGTSTHDGNAIATAYVEKLTT-INCRTLFSTH 980
Query: 914 YPKIAD-IKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
Y + D + + +G H++ + + D +++ VT+LYK+ G S+GF V
Sbjct: 981 YHSLVDHFEARRDVQLG--HMACMVEND-----DDPTEESVTFLYKMARGRCPKSYGFNV 1033
Query: 973 AQLAQLPPSCISRATVIAAKLEAEVSSR 1000
A+L+ L +SR I+ +LE E SR
Sbjct: 1034 ARLSGLKHCIVSRGREISKQLENESKSR 1061
>gi|146281879|ref|YP_001172032.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri A1501]
gi|145570084|gb|ABP79190.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri A1501]
Length = 891
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 275/949 (28%), Positives = 427/949 (44%), Gaps = 178/949 (18%)
Query: 77 PTPSSQTTHN-KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH 135
PTP +++ + +TP+ QQ +LK ++PD L+ +G + F +DA+ AA +L I
Sbjct: 30 PTPMTKSNADLSAHTPMMQQYWKLKREHPDQLMFYRMGDFYELFYDDAKKAAALLDITLT 89
Query: 136 LDHNFMTASIPTFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGL 190
+IP + H + RLV G V + +Q A GP R +
Sbjct: 90 ARGQSAGTAIPMAGIPFHSAEGYLARLVKLGESVVICEQIGDPATSK------GPVERQV 143
Query: 191 SALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
+ T T+ + D N L VV D+ +FG
Sbjct: 144 VRIITPGTVSDEALLDERRD------NLLAAVVGDEK--------LFG------------ 177
Query: 251 EISTGDVVYGEFNDGFLRSG--LEAVLLSLSPAELLL------GQPLSKQTEKMLLAYAG 302
+S D+ G F+ L+ L A L LSPAELL+ G PL K+
Sbjct: 178 -LSVLDIASGRFSVQELKGWETLLAELERLSPAELLIPDDWPQGLPLEKR---------- 226
Query: 303 PASNVRVECA---SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE 359
VR RD + SL + L +N+ + AI
Sbjct: 227 --RGVRRRAPWDFDRD--------SAFKSLCQQFSTQDLKGFGCENLTL--------AIG 268
Query: 360 GIMNMPDLAVQALALTIRHLKQFGLER----IMCLGASFRSLSGSMEMTLSANTLQQLEV 415
+ A + + HL+ ER ++ GAS R+L +L+V
Sbjct: 269 AAGCLLAYAKETQRTALPHLRSLRHERLDDTVILDGASRRNL--------------ELDV 314
Query: 416 LRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSY 475
N G TL +M+ T GSRLL RW+ PL +R ++ AR D+++ + E Y
Sbjct: 315 ---NLAGGRENTLQSVMDRCQTAMGSRLLTRWLNRPLRNREILEARQDSITCLLEH---Y 368
Query: 476 RTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV 535
R + ++PQ L +G D++R + RI R A P + +
Sbjct: 369 RFEQ--------------LQPQ--------LKDIG---DLERILARIGLRNARPRDLARL 403
Query: 536 MQAI-----LYAGKQ-LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
A+ L AG Q L H+ G + T L + LL R I+ + PAVI
Sbjct: 404 RDALAALPQLQAGMQDLVAPHLLGLAKSIGTYPEL-ADLLARAIID-NPPAVI------- 454
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE-- 647
D G ++ G +E+ + ++A + L L + + G+ NL+
Sbjct: 455 -------RDGG------VLKTGYDAELDELQSLSENAGQYLMDLETREKARTGLANLKVG 501
Query: 648 FMSVSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+ V G + IELP+ P ++ + + K R+ +PE+ D+ A
Sbjct: 502 YNRVHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALARE 559
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHIC 765
+ +D L+ G+ A Q + ALA LD L LA + N + RP FV+ +P + I
Sbjct: 560 KLLYDELLEMLIGHLAPLQESAAALAELDVLSNLAERALNLDLNRPRFVE--QPC-LRIE 616
Query: 766 SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
GRHPV++ +L FV ND L + +ITGPNMGGKS Y+RQ ALI ++AQ+GSFV
Sbjct: 617 QGRHPVVEQVLETPFVANDLALD-DATRMLVITGPNMGGKSTYMRQTALIVLLAQIGSFV 675
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PA++ EL ++D I+TR+G+SD + GRSTF+ E++E + IL N + +SLV++DE+GRGTS
Sbjct: 676 PAAACELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNASDRSLVLMDEVGRGTS 735
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPM 945
T DG+++A+A + L + LF THY ++ + + V H+S T H
Sbjct: 736 TFDGLSLAWAAAEQ-LARLRAFTLFATHYFELT-VLPESEPVVANVHLSA-TEH------ 786
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++ + +L+ V+PG + S+G VAQLA +P I RA ++LE
Sbjct: 787 ----NERIVFLHHVLPGPASQSYGLAVAQLAGVPGEVIQRARDHLSRLE 831
>gi|407405377|gb|EKF30408.1| mismatch repair protein MSH3, putative [Trypanosoma cruzi
marinkellei]
Length = 946
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 307/627 (48%), Gaps = 72/627 (11%)
Query: 392 ASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHP 451
A +++G ME L +TL L++ ++S G++ G+L+ ++NH+LT G R LR W++ P
Sbjct: 361 AVIDNVTGKME--LPGSTLNALDIF-HSSIGAK-GSLMALLNHSLTTPGVRRLRLWLSEP 416
Query: 452 LCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGR 511
C I+AR +AVS + H E ++ VT +L R
Sbjct: 417 PCAMKTITARRNAVSFLL--------------HGEDDNTVT-----------HLLRECAR 451
Query: 512 SPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKR 571
DI+ + ++ + + +E+I +++A+ T+ TL A+L R
Sbjct: 452 FGDIEATLGKMRAQRCSVTEYIQLLRAL-------------------ETAHTLAHAVLSR 492
Query: 572 -------LILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
LIL + A + E S G V + +
Sbjct: 493 NDGRIDNLILETLQKVTSAETANFIQLCKCEMESHATSPLEYFTSQG--VSVPPSMQTHL 550
Query: 625 SAKEE----LDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKK 678
+A++E LD + R+ L M LE+ +++G ++++P +VP +W + TK
Sbjct: 551 TARDEALHALDEELEYIRQTLRMPELEYRTIAGTPFIVDVPQAKCNRVPKDWLVLTRTKS 610
Query: 679 TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG---YYAEFQAAVQALAALDC 735
+R+H+P ++ L A E L I + AW E FQA + A+A LD
Sbjct: 611 HVRFHTPNIVDRNVLLCSARERLLIAAKDAWQQKQDELSNSSLAMNAFQAVIDAVAVLDA 670
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
+ LA S + +V P DD + I GRHPVLD IL +V D L +
Sbjct: 671 IRCLAVTSSSHGYVAPELSDD--ATCLKIVGGRHPVLDNILRGGYVGCDVCLAKGGAW-- 726
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
I+TGPNMGGKS +R V IMAQ+G +VPA++A+L + +Y RMGASDS+ +G STF
Sbjct: 727 ILTGPNMGGKSALMRMVGAFVIMAQLGCYVPATAAQLPLFTAVYCRMGASDSLLEGTSTF 786
Query: 856 LEELNEASYILRNC-TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
L+E+ E S ILR+ + SLV++DELGRGTS+ DG+A+A AT +YLL+ M LFVTHY
Sbjct: 787 LKEMQETSRILRSPRVSSSLVLLDELGRGTSSFDGIAVAAATFEYLLQRGTTM-LFVTHY 845
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
+ + T Y+ + + + + + YK PGV+ SSFG +VA+
Sbjct: 846 SHLCEPYLHNTSEGKQVLCYYMGFSEERDEEEGNKEPKLVFTYKPTPGVTPSSFGVRVAR 905
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSRV 1001
+A LP ++ A ++ E E +R+
Sbjct: 906 MAGLPHDVVAEAQRLSEMEEREHMTRM 932
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 2/119 (1%)
Query: 90 TPLEQQVVELKTKYP-DVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
TPLE+QV+ LK P DV+LM+ GY+ +F+G D+ +A++ LGI F ++S+P
Sbjct: 38 TPLEKQVIRLKESLPPDVVLMVACGYRVKFYGRDSRVASRRLGIMCIGTTPFESSSVPYV 97
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
R+N++V RLV G++V Q E A+I+A G F R ++ + ++ TL +E +G
Sbjct: 98 RVNLYVHRLVAMGYRVAFADQ-ENASIRATSGTAKGIFTREITRVCSRGTLLPSEVIGA 155
>gi|412339108|ref|YP_006967863.1| mismatch repair protein [Bordetella bronchiseptica 253]
gi|408768942|emb|CCJ53715.1| mismatch repair protein [Bordetella bronchiseptica 253]
Length = 865
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 263/921 (28%), Positives = 413/921 (44%), Gaps = 141/921 (15%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTASIPTF 148
QQ + LK + +LL +G + F EDAE AA++L + N A IP
Sbjct: 3 QQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERAARLLNLTLTKRGNSNGTPIPMAGIPVH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG 207
+ ++ RLV G V + +Q + AA K GP R + + T TL +
Sbjct: 63 AMEQYLARLVALGESVAICEQIGDPAAAK-------GPVERRIVRIVTPGTLTDEALLPA 115
Query: 208 GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFL 267
D + VCV GK + R G+ + +++G E
Sbjct: 116 KAD----RALAAVCVT------GK---------REPRAGLAWLNLASGAFHVTECAP--- 153
Query: 268 RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVM 327
+ LE+ L ++PAEL+ Q E L A + RV F GA A+++
Sbjct: 154 -AQLESELHRIAPAELI-------QAESAELHMAFEGARTRVPDWH---FEADGARAQLL 202
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
+ ++ D+L + ++M +A+ + A + + + H++ ER
Sbjct: 203 AHFKT---DSLGGFDVEDMP--------AAVCAAGALLRYAARTQSQALAHVQTIAAER- 250
Query: 388 MCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRW 447
+ L T + LE L +G E TL +++ T GSRLLRRW
Sbjct: 251 -----------PGQYVLLDPVTRRNLE-LTQTLSGEESPTLFSLLDGCRTPMGSRLLRRW 298
Query: 448 VTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLT 507
+ HPL + + AR A++ + T+ G+ + +L ++
Sbjct: 299 LHHPLRENEPVLARQHAIATML-------TARQEGEQAFAAAG----------LLETLRD 341
Query: 508 SLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH-----IDGEYREKVTSK 562
+L PDI+R R+ R+ P E ++ A++ L LH + G R + +
Sbjct: 342 ALNAFPDIERIAARVALRSVRPRELASLRDALV----ALPALHASLAPLSGSPRARELAA 397
Query: 563 TLH-----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
L LL R + AS PAV + D G +I+ G SE+
Sbjct: 398 QLAMPPDIGELLARAV--ASEPAVAIR-------------DGG------VIAAGFDSELD 436
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVNS 675
R + L L R++ G+ NL EF V G + KVP ++ + +
Sbjct: 437 ELRALATDGGDFLVQLEARERERTGIGNLRVEFNRVHGFYIEVSKGQTDKVPEDYRRRQT 496
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
K RY +PE+ T D++ A + + ++ L Y ALA LD
Sbjct: 497 LKNAERYITPELKTWEDRVLSAQDRSLAREKWLYEQLLDALAQYVRPLSQCASALAELDT 556
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQ 795
L ALA +R ++V P +D E I I +GRHPV++ + + F PN L R
Sbjct: 557 LAALAEHARRHDWVAPELIDGAE---IDIEAGRHPVVERAI-ERFTPNGCRLDQTRRML- 611
Query: 796 IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTF 855
+ITGPNMGGKS Y+RQVALI ++A+ GSFVPA+ A + LD I+TR+GA+D + GRSTF
Sbjct: 612 LITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDRIFTRIGAADDLAGGRSTF 671
Query: 856 LEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYP 915
+ E+ EA+ IL T SLV++DE+GRGTST+DG+A+A+A LL H + + LF THY
Sbjct: 672 MMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIAYRLLTHNRALTLFATHYF 731
Query: 916 KIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQL 975
++ T+ T +L + + G + +L++V G + S+G +VAQ
Sbjct: 732 EL----TRLPAEQPTAANVHLAAAESAG--------GIVFLHEVREGPASRSYGIQVAQR 779
Query: 976 AQLPPSCISRATVIAAKLEAE 996
A +P + I +A+ +LEA+
Sbjct: 780 AGVPAAVIRQASRELERLEAQ 800
>gi|339484817|ref|YP_004696603.1| DNA mismatch repair protein mutS [Nitrosomonas sp. Is79A3]
gi|338806962|gb|AEJ03204.1| DNA mismatch repair protein mutS [Nitrosomonas sp. Is79A3]
Length = 866
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 251/926 (27%), Positives = 416/926 (44%), Gaps = 137/926 (14%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDH 138
T ++TP+ QQ + +K ++PD+L+ +G + F +DAE AAK+LGI A
Sbjct: 3 TQKDQHTPMMQQYLRIKAQHPDMLMFYRMGDFYELFFDDAEKAAKLLGITLTQRGASAGE 62
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
A +P ++ +LV +G V + +Q A GP R ++ + T T
Sbjct: 63 PIKMAGVPYHAAEQYLAKLVKSGESVAICEQVGDPAT------SKGPVAREVTRIITPGT 116
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
L A +++D + + V + LG+ + ++ G +
Sbjct: 117 LTDA------------------ALLEDKRDCILLALWV----HESILGLAWLNLAAGQLR 154
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
E + L S LE L P+E+LL + L KQ E
Sbjct: 155 VMETSPQNLLSELE----RLQPSEILLPESL-KQAE----------------------IQ 187
Query: 319 GGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD--LAVQALALTI 376
G + + L++ DT NN + + H + G ++P A AL
Sbjct: 188 GKNWALKRLPLWQ-FDRDTAINNLTRQFE-----THDLSGFGCEDLPIALCAAGALLEYA 241
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
R + I L A S+ M+ A T + LE+ G TLL +++
Sbjct: 242 RLTQGSAALPITSLQAERDSIYIRMD----AATRRNLEI-SETIRGERSPTLLSLLDTCS 296
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T GSRLL+ W+ HPL D I RLD+V+ + +G+ ++ N
Sbjct: 297 TNMGSRLLQFWLHHPLRDHAAIQKRLDSVAAL------------IGESEQNN-------- 336
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
Y++ +L D++R RI ++A P + + ++ + +Q + R
Sbjct: 337 --YWVARDLLRQF---VDVERITARIALKSARPRDLSGLRDSLKLLPEVIQAMANGSSER 391
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
S+ + + ++ + +++ + +L N +I++G +E+
Sbjct: 392 ---ISQLIQAMQIEPALFELLRKSLLEEPGVVLREGN-------------VIADGYDAEL 435
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R + E L L +++ G+ NL E+ V G + + K+P ++ +
Sbjct: 436 DELRALQNNCGEFLLQLEIREKERTGIPNLKVEYNRVHGFYIEVTHAHSEKIPADYRRRQ 495
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVC-RAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE L A + AL+ ++ + + +D L GY Q ++A +
Sbjct: 496 TLKSAERYITPE-LKAFEDKALSAQDRALAREKYLYDELLNVLLGYIHPLQKMAASVAEI 554
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAE--- 790
D L A A ++ ++ P HE + I +GRHPV+++ ++NFV ND L A+
Sbjct: 555 DVLCAFAERAQALDYTAPYL--SHEEI-FEIDTGRHPVVES-QVENFVANDVQLGADYTG 610
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ IITGPNMGGKS Y+RQ+ALI ++A GS+VPA L LD I+TR+GA+D +
Sbjct: 611 KPQMLIITGPNMGGKSTYMRQIALIALLAHCGSYVPAKRVRLGRLDQIFTRIGAADDLAS 670
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLF 910
GRSTF+ E+ E + IL N TAQSLV++DE+GRGTST DG+A+A+A YLL + LF
Sbjct: 671 GRSTFMVEMTETANILHNATAQSLVLMDEVGRGTSTFDGLALAFAIARYLLSKNRSFTLF 730
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ + +F + + H+++ +L+KV G + S+G
Sbjct: 731 ATHYFELTKLAEEFKQIQNVHLDAVEYKHRIV------------FLHKVAEGPASQSYGL 778
Query: 971 KVAQLAQLPPSCISRATVIAAKLEAE 996
+VA LA +P S I A KLE E
Sbjct: 779 QVAALAGVPESVIKVARKHLIKLEQE 804
>gi|226198830|ref|ZP_03794393.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei Pakistan
9]
gi|225928930|gb|EEH24954.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei Pakistan
9]
Length = 893
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 256/926 (27%), Positives = 409/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A A
Sbjct: 23 HTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 82
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 83 GVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 136
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 137 LLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAELA 180
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 181 PDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQRL 230
Query: 324 A---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
EV SL + G L++ + G + + A Q L RH++
Sbjct: 231 CDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHVR 273
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+E + S + L +T + LE L G+E TL +++ T G
Sbjct: 274 SLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAMG 320
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLLR W+ HP AR A+ + ++ + G
Sbjct: 321 SRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG------------------ 356
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 357 -LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERVA 405
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEV 616
++A L RL P G L + E A D G +I+ G +E+
Sbjct: 406 EIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAEL 457
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 458 DELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 517
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + Q LA LD
Sbjct: 518 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAELD 577
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 578 LLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKLL 633
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRST
Sbjct: 634 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRST 692
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF THY
Sbjct: 693 FMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHY 752
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 753 FELTQLPAEFPHAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVAQ 800
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 801 LAGVPAPVIRAARKHLAHLEQQSAAQ 826
>gi|170699304|ref|ZP_02890353.1| DNA mismatch repair protein MutS [Burkholderia ambifaria IOP40-10]
gi|170135796|gb|EDT04075.1| DNA mismatch repair protein MutS [Burkholderia ambifaria IOP40-10]
Length = 885
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 251/926 (27%), Positives = 406/926 (43%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K +PD L+ +G + F EDAE AA++L + A A
Sbjct: 12 HTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 71
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G V + +Q A GP R + + T TL A
Sbjct: 72 GVPHHAVEQYLAKLVKMGESVAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 125
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D YL+ + G + GV V +G+ + +++G + E
Sbjct: 126 LLSDKND------VYLLAMC-----TGHNKRGVA-----VNIGLAWLNLASGALRLAEIE 169
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 170 PDQLGAALERI----RPAEILTADGATDAVP------AGAGAIKRVPAWHFDIASGTQRL 219
Query: 324 AEVMSL--YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
+ + + + G +L+ SA + A +RH++
Sbjct: 220 CDQLDVAGLDGFGAHSLT----------------SACGAAGALLLYAAATQGQQLRHVRS 263
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+E + + + L T + LE L G+E TL +++ T GS
Sbjct: 264 LKVE------------NETEYIGLDPATRRNLE-LTETLRGTESPTLYSLLDTCCTTMGS 310
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLR W+ HP SV + + +++
Sbjct: 311 RLLRHWLHHP-------------------------PRASVAAQSRQQAIGALLDAPANAS 345
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L ++ ++L + D++R R+ +A P + ++ L L RE++++
Sbjct: 346 LDALRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERISA 395
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLL-STVNKEAA----DQGDLLNLMIISNGQFSEV 616
++ L R+ + PA + LL S + E A D G +I+ G +E+
Sbjct: 396 IVANADALTRVDAALAPPA---ECLDLLTSAIAPEPAAMVRDGG------VIARGYDAEL 446
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 447 DELRDISENCGQFLIDLEARERTRTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 506
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + E Q ALA LD
Sbjct: 507 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPFIPECQRVASALAELD 566
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND AER+
Sbjct: 567 VLAAFAERARTLDWVAPTFTDE---IGIEIEQGRHPVVEA-QVEQFIANDCRFGAERKLL 622
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA SA +D I+TR+GA+D + GRST
Sbjct: 623 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRST 681
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T QSLV++DE+GRGTST DG+A+A+A +LL C LF THY
Sbjct: 682 FMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAQNGCYTLFATHY 741
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 742 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVNEGPANQSYGLQVAQ 789
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 790 LAGVPAPVIRAARKHLAYLEQQSATQ 815
>gi|282889672|ref|ZP_06298211.1| hypothetical protein pah_c004o009 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500246|gb|EFB42526.1| hypothetical protein pah_c004o009 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 849
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 182/612 (29%), Positives = 309/612 (50%), Gaps = 73/612 (11%)
Query: 400 SMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLIS 459
S ++L TL+ LE++ ++GS TLL +++H+ T G+RLLR+W+ PL I
Sbjct: 272 SQYLSLDRMTLRHLELIDPLNHGSRKNTLLGVLDHSHTPMGARLLRQWIKQPLLSIPEIH 331
Query: 460 ARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLG----RSPDI 515
R +AV Q +Y S++ +G + D+
Sbjct: 332 QRQEAV-------------------------------QAFYDTPSLMQRIGAVLEQVRDL 360
Query: 516 QRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILT 575
+R + RI ATP + +A+ ++ + L ++ KTL L + L
Sbjct: 361 ERLMMRISSGYATPRDLVALR----FSMEPLPEI------------KTLLLTLASQSALL 404
Query: 576 ASSPAVIGKAAKLLSTVNKEAADQG--DLLNLMIISNGQFSEVARARKAVQSAKEELDSL 633
A+ I ++ + D + I +G E+ R+ + +K +
Sbjct: 405 ATEAQRIDFLPEMTRLIANALVDDPPVKITEGKIFRDGYHPELDELREISRDSKSWIARY 464
Query: 634 INMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTAL 691
R + G+++L+ + IE+ K+P ++ + + R+ +PE+
Sbjct: 465 QTQIRDETGLKSLKVGFNRMFGYYIEVSKGQAEKMPDSFQRRQTLVNAERFITPELKNYE 524
Query: 692 DQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRP 751
++ A E ++ + + + ++ G + + QALA +DCL +L +R ++RP
Sbjct: 525 AKVLNAEERISAIENELFQTLRQQIGQFSKQVLTTAQALARIDCLRSLGEAARTNQYIRP 584
Query: 752 VFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIR 810
+ VDD + I GRHPV++ + F+PNDT L +ITGPNM GKS YIR
Sbjct: 585 L-VDD--SAHLKIVDGRHPVIEAAHAGEKFIPNDTLLDGSDNRLLLITGPNMAGKSTYIR 641
Query: 811 QVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCT 870
QVALI IMAQ+GSF+PA A + ++D ++TR+GASD + +G+STF+ E+ E + IL N T
Sbjct: 642 QVALITIMAQMGSFIPAKEAHVGLIDKVFTRIGASDDLSRGQSTFMVEMVETANILHNAT 701
Query: 871 AQSLVIVDELGRGTSTHDGVAIAYATLDYLL--EHKKCMVLFVTHYPKIADIKTKFTGSV 928
++SLVI+DE+GRGTST+DG++IA++ ++LL E K LF THY ++ ++ K G+V
Sbjct: 702 SRSLVILDEIGRGTSTYDGISIAWSVAEHLLITEGKMAKTLFATHYWELTKLEEKIPGAV 761
Query: 929 GTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATV 988
Y+V+ ++ ++ +L K++ G ++ S+G V +LA LPPS I+RA
Sbjct: 762 N-YNVAV-----------QENADNIIFLRKIIKGGTDKSYGIHVGRLAGLPPSVITRAKE 809
Query: 989 IAAKLEAEVSSR 1000
I LE + +
Sbjct: 810 ILVHLEENANQK 821
>gi|167623165|ref|YP_001673459.1| DNA mismatch repair protein MutS [Shewanella halifaxensis HAW-EB4]
gi|189083191|sp|B0TK13.1|MUTS_SHEHH RecName: Full=DNA mismatch repair protein MutS
gi|167353187|gb|ABZ75800.1| DNA mismatch repair protein MutS [Shewanella halifaxensis HAW-EB4]
Length = 859
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 252/918 (27%), Positives = 410/918 (44%), Gaps = 134/918 (14%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
+K+TP+ +Q + LK ++PD+LL +G + F EDA+ A+++LGI IP
Sbjct: 10 EKHTPMMRQYLTLKAQHPDMLLFYRMGDFYELFYEDAKRASELLGISLTARGKSGGDPIP 69
Query: 147 TFRLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
L H + +LV V + +Q A GP R + + T TL
Sbjct: 70 MAGLPYHAVEGYLAKLVQLRVSVAICEQIGDPATSK------GPVERKVVRIVTPGTL-- 121
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
++ + D + + G G G+ +++++G V E
Sbjct: 122 --------------TDEALLQERQDNLLAALYQGKTGYGY------ATLDVASGRFVITE 161
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
+ LEA L +PAELL + S+ + ++ A G E C
Sbjct: 162 LANT---EALEAELQRTNPAELLYSEDFSEMS--LIAAINGTRRRPEWEFDYDTCH---- 212
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
L G L GI + L++QA ++++K
Sbjct: 213 -----RLLLNQFGTKDLKGF------------------GIEDA-RLSLQAAGCLMQYVKD 248
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
+ + + R + S + L A T + LE+ N G E TL ++++T+T GS
Sbjct: 249 TQRTALPHINSIVR-FNQSDSIVLDAATRRNLELTVNLQGGRE-NTLASVLDNTVTPMGS 306
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R+L+RW+ PL D ++I AR ++ E+ +G+ Y I
Sbjct: 307 RMLQRWLHQPLRDHDIIRARQVSIEEL---LGNAN----------------------YEI 341
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
LS L ++G DI+R TRI R A P +F + QA+ QLQQ
Sbjct: 342 LSEDLKAIG---DIERITTRIALRNARPRDFARLRQALALL-PQLQQ------------- 384
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL--NLMIISNGQFSEVARA 619
TL A L + VIG+ L +++ D +L + +I G E+ +
Sbjct: 385 -TLTQAAAPHLKYLSQ---VIGEFPDELELLSRAVVDNPPMLIRDGGVIREGYNEELDQW 440
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTK 677
RK + A + L L ++Q G+ L+ + V G + + VPL++ + + K
Sbjct: 441 RKLSEGATDYLHELEAREKQQTGISTLKVGYNRVHGYYIEVSRRESDLVPLSYQRRQTLK 500
Query: 678 KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLH 737
T RY PE+ +++ + + + W+ E Q +A A LD L
Sbjct: 501 NTERYIIPELKEHEEKVLSSQGRALALEKQLWEQLFDLILPKLHELQDFARASAELDVLC 560
Query: 738 ALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQII 797
A + + N+ P D I I +GRHPV++ + F+ N L+ ER+ I+
Sbjct: 561 NFAERAESLNYHCP---DLSTAPGIQIEAGRHPVVEQVSQSPFIANPVTLNNERKML-IV 616
Query: 798 TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLE 857
TGPNMGGKS Y+RQVALI +MA +G +VPA A + +D I+TR+GASD + GRSTF+
Sbjct: 617 TGPNMGGKSTYMRQVALITLMAHIGCYVPAEHAVIGPVDRIFTRIGASDDLASGRSTFMV 676
Query: 858 ELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKI 917
E+ E + IL N T SLV++DE+GRGTST+DG+++A++ +YL +H + M LF THY ++
Sbjct: 677 EMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWSAAEYLAKHLQAMTLFATHYFEL 736
Query: 918 ADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQ 977
+ + +V H+ + + + +++ V G + S+G +VA LA
Sbjct: 737 TQLP-ELLSNVENVHLDAV-----------EHGDSIVFMHAVQEGAASRSYGLQVAALAG 784
Query: 978 LPPSCISRATVIAAKLEA 995
+P IS A +LE+
Sbjct: 785 VPNCVISAAKHKLHQLES 802
>gi|399923769|ref|ZP_10781127.1| DNA mismatch repair protein MutS [Peptoniphilus rhinitidis 1-13]
Length = 869
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 244/943 (25%), Positives = 435/943 (46%), Gaps = 163/943 (17%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHN 139
+ +K TP+ +Q + +K + PD +L +G + F EDA +A++ L I A LD
Sbjct: 2 NREKLTPMMKQYLAVKDENPDAILFFRLGDFYEMFFEDALLASRELEITLTKRDAGLDEK 61
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
+P + ++ +L++ G+KV + Q E + G R ++ + T T
Sbjct: 62 APMCGVPYHVASSYISKLIDKGYKVAICDQIEDPKLAK------GIVKREVTQIITPGTF 115
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
E + +NYL+ + F DG+ L + STG++ +
Sbjct: 116 TDTEYLKSDL------NNYLLSI--------------FIDGY--SLNFTYSDYSTGEIYF 153
Query: 260 GE---------FNDGFLRSGLEAVLLSLSPAELLLGQ---PLSKQTEKMLLAYAGPASNV 307
E +N FLR ++ + SP E+LL + P K EK+ S +
Sbjct: 154 TEKTFLSKDDPYN--FLRDEIDRI----SPNEILLNEEAIPFFK--EKIKKDNVFINSYI 205
Query: 308 RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL 367
E D G ++ D NN ++ M GN+ S + +
Sbjct: 206 SEELKDLDLLKG----------FKEFFSDNFKNNLNEFM-----GNNLSDFTSLKKLLQY 250
Query: 368 AVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGT 427
+ + ++H+ + + + S + L ++ + LE++R + ++ G+
Sbjct: 251 LIVTQKINLKHIN------------TVKYYNSSDFLVLDESSKRTLELVRGLNTFTKKGS 298
Query: 428 LLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEK 487
LL +++ T GSR L++WV PL + + I R + + +++
Sbjct: 299 LLEVLDKCNTSMGSRKLKKWVESPLINLDKIIERQNIIESFTKNL--------------- 343
Query: 488 NSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ 547
I+E + IL V DI+R + +I + P E ++ I+ + K
Sbjct: 344 -----ILEDKIEKILKEVY-------DIERLVVKISKGSINPREIYSLKSTIINSIKIKN 391
Query: 548 QL-HIDGEYREKVTSKTLH-SALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
L + +Y K T + + + ++ IL P VI +
Sbjct: 392 MLRESENKYLIKFTEDFIDLTYIYNKIDSILIEDPPVVIEENR----------------- 434
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
II G ++ K K L R++ G++ L+ + + IE+ +
Sbjct: 435 ---IIKEGYSKDLDELFKVSLEGKNWLLDFEKRERERTGIKKLKVKHNKILGYFIEVTKS 491
Query: 664 F--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+ VP ++ + + + R+ S E L ++ + +++ + + + L+E Y A
Sbjct: 492 YLDDVPDDYIRKQTLVGSERFFSVE-LKDMEGKLIGSKDRALTLQYGIYNELRE---YIA 547
Query: 722 EFQAAVQALA-------ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDT 774
+ +Q L+ AL L +A+L+ N+V+P F + E + I I SGRHP++++
Sbjct: 548 KEIYNIQILSEKLSSLDALLSLSKVASLN---NYVKPQF--NKEGI-IKIKSGRHPIVES 601
Query: 775 ILLDNF-VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELH 833
+ D+F VPNDT L ++E IITGPNM GKS Y+RQVALI IM+ +GSFVPA SA++
Sbjct: 602 YMNDDFFVPNDTYLDNKKEMIHIITGPNMAGKSTYMRQVALITIMSHIGSFVPAESADIS 661
Query: 834 VLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIA 893
++D I+TR+GASD++ +G+STF+ E+ E + I+ N T++SL+I+DE+GRGTST DG+AIA
Sbjct: 662 LVDRIFTRIGASDNLSKGQSTFMVEMKEVADIIENATSKSLLILDEVGRGTSTFDGLAIA 721
Query: 894 YATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDV 953
A ++Y+ E+ K LF THY ++ +++ K+ K + + D D+
Sbjct: 722 NAIVEYIAENIKAKTLFATHYHELVNLEEKY------------DCIKNLTIAVDRQDDDI 769
Query: 954 TYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+L K++ G + +S+G VA+LA + I+RA + +E E
Sbjct: 770 IFLRKIINGFTNNSYGIDVAKLAGIDNVIINRAKEVLDVIERE 812
>gi|338733719|ref|YP_004672192.1| DNA mismatch repair protein mutS [Simkania negevensis Z]
gi|336483102|emb|CCB89701.1| DNA mismatch repair protein mutS [Simkania negevensis Z]
Length = 864
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 189/640 (29%), Positives = 330/640 (51%), Gaps = 76/640 (11%)
Query: 372 LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
L+L++ H+KQ L+ + S M++ T + LE+ GS+ TLL +
Sbjct: 247 LSLSVDHIKQIKLDHL------------SSYMSIDRATQRNLELTEPLHRGSKSCTLLKL 294
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
++ T+T G+RLL+ WV HPL I R D + E+ R
Sbjct: 295 LDRTVTPMGARLLKSWVIHPLLSPQKIQKRQDGIEELLNKQKEAR--------------- 339
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
+L L ++ D++R I RI +TP + +G + +I
Sbjct: 340 ---------LLREDLQNIR---DLERLIMRISTGYSTPRDL---------SGLRFSLENI 378
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNG 611
RE +T + L++ L+ P+ I A + + V++ G+ +I G
Sbjct: 379 PS-VREHLTP--FQAILMQTLLSHLPDPSEITHAIQT-TLVDEPPIKMGEG---KVIRPG 431
Query: 612 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF--KVPLN 669
+E+ R +++ + + ++ G++ L+ + IE+ K+P +
Sbjct: 432 FNAELDELRSLKANSQSWIANYQAELKEATGIKTLKITYSKAFGYCIEVSRGQADKMPSS 491
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQA 729
+ + + + R+ SPE+ +++ A E++ + ++ + + K + + +A
Sbjct: 492 FQRRQTLINSERFISPELKAYEEKILTAEEKIQALEQSLYQTLRKMIAKHLPTVKKIAKA 551
Query: 730 LAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNLH 788
+A LDCL AL ++R+ N+ RP+ +DD + ++I GRHPV++ L D+ F+PNDT+L
Sbjct: 552 IANLDCLLALMHVARDNNYCRPL-IDDSD--TLYIQKGRHPVIEASLFDDSFIPNDTHLS 608
Query: 789 AEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSI 848
+ +ITGPNM GKS YIRQVALI IMAQ+GS+VPA SA + ++D +++R+GASD +
Sbjct: 609 QKECQLMLITGPNMAGKSTYIRQVALIAIMAQIGSYVPAHSARIGIIDKVFSRIGASDDL 668
Query: 849 QQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--KC 906
+G+STF+ E+ E + IL N + +SLVI+DE+GRGTST+DG++IA+A ++LL +
Sbjct: 669 ARGQSTFMVEMTETANILNNASPRSLVILDEIGRGTSTYDGISIAWAVAEHLLTLRGEGV 728
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
LF THY ++ ++ + G + ++V+ ++ + +L K++PG ++
Sbjct: 729 KTLFATHYWELTELALERKG-ILNFNVAV-----------KETSDSIVFLRKIIPGCTDK 776
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLE-AEVSSRVQNRS 1005
S+G VA+LA LP S I RA +LE E S+V+ S
Sbjct: 777 SYGIHVARLAGLPHSAIKRAQEKLRQLENKETPSQVKEES 816
>gi|187479070|ref|YP_787095.1| DNA mismatch repair protein MutS [Bordetella avium 197N]
gi|123514196|sp|Q2KWZ4.1|MUTS_BORA1 RecName: Full=DNA mismatch repair protein MutS
gi|115423657|emb|CAJ50202.1| DNA mismatch repair protein [Bordetella avium 197N]
Length = 875
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 266/932 (28%), Positives = 429/932 (46%), Gaps = 141/932 (15%)
Query: 83 TTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMT 142
T + +TP+ QQ + LK + +LL +G + F EDAE AA++L +
Sbjct: 3 TVDSSSHTPMMQQYLRLKAEAGPLLLFYRMGDFYEMFYEDAEKAARLLNVTLTKRGTSNG 62
Query: 143 ASIPTFRLNVH-----VRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGLSALYTK 196
A IP + VH + RLV G V + +Q + AA K GP R + + T
Sbjct: 63 APIPMAGVPVHAMEQYLARLVALGESVAICEQIGDPAAAK-------GPVERRIVRIVTP 115
Query: 197 ATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGD 256
TL + D + VC+ GK D R G+ + +++G+
Sbjct: 116 GTLTDDALLPAKAD----RALAAVCLS------GK---------RDPRAGIAWLNLASGE 156
Query: 257 VVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDC 316
E L S L + PAEL+ + ++ + Y+G S V
Sbjct: 157 FHVTECAPAQLDSELHRI----GPAELVYAD-----STELDITYSGARSRV-----PDWH 202
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
F GA + +++ ++ D+L+ + ++M V A+ + A + + +
Sbjct: 203 FEADGARSHLLTHFQT---DSLAGFDIEDMPV--------AVCAAGALLRYAARTQSQAL 251
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
H++ ER M + + T + LE L +G E TL +++
Sbjct: 252 AHVQTISAER------------AGMYVLMDPVTRRNLE-LTQTLSGEEAPTLFSLLDDCR 298
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEI-AESMGSYRTSESVGQHDEKNSDVTIVE 495
T GSRLLRRW+ HPL + ++AR A++ + + + +T + G
Sbjct: 299 TPMGSRLLRRWLHHPLRENAPVAARQQAIATLLSARLDMAQTFGAAG------------- 345
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL----HI 551
+L ++ ++LG PDI+R R+ R+ P E +A ++ L QLQ L
Sbjct: 346 -----LLETLRSALGLFPDIERIAARLALRSVRPRE-LASLRDALATLPQLQTLVAPLSA 399
Query: 552 DGEYREKVTSKTLHSA---LLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
E T TL A LL R I A PA+ + ++++ D+ L L+
Sbjct: 400 SPRLAELATQLTLDPAIADLLSRAI--AQEPALAIRDGGVIASGFDADLDE---LRLLAA 454
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKV 666
+G+F AR+ R++ G+ NL EF V G + KV
Sbjct: 455 DSGEFLVQLEARE----------------RERTGISNLRVEFNRVHGFYIEVSKGQTDKV 498
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW--DSFLKEFGGYYAEFQ 724
P ++ + + K RY +PE+ + D++ A + + R W + L Y
Sbjct: 499 PEDYRRRQTLKNAERYITPELKSWEDKVLSAQDR--ALAREKWLFEQVLDALSAYVRPLS 556
Query: 725 AAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPND 784
A ALA LD L +LA +R +V P D E +I I +GRHPV++ + + F PN
Sbjct: 557 DAAAALAELDALGSLAEHARRHEWVAP---DLLESAEIDIDAGRHPVVEHAI-ERFTPNH 612
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
L A R +ITGPNMGGKS Y+RQVALI ++A+ GSFVPA A + +D I+TR+GA
Sbjct: 613 CRLDATRRML-LITGPNMGGKSTYMRQVALIALLARTGSFVPARRARVGKIDRIFTRIGA 671
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D + GRSTF+ E+ EA+ IL T+ SLV++DE+GRGTST+DG+A+A+A L+ H
Sbjct: 672 ADDLAGGRSTFMMEMTEAAAILAASTSNSLVLMDEIGRGTSTYDGLALAWAIAQRLITHN 731
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
+ + LF THY ++ + ++ + H++ ++S + +L++V G +
Sbjct: 732 RALTLFATHYFELTRLPSE-QATAANVHLAA-----------AESAGGIVFLHEVREGPA 779
Query: 965 ESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
S+G +VAQ A +P + I AT +LEA+
Sbjct: 780 SRSYGIQVAQRAGIPAAVIRHATRELERLEAQ 811
>gi|404482176|ref|ZP_11017403.1| DNA mismatch repair protein MutS [Clostridiales bacterium OBRC5-5]
gi|404344337|gb|EJZ70694.1| DNA mismatch repair protein MutS [Clostridiales bacterium OBRC5-5]
Length = 882
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 245/938 (26%), Positives = 442/938 (47%), Gaps = 153/938 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
+P+ + +E K +YPD +L +G + F EDA A+ L G L+
Sbjct: 4 SPMMSKYLETKKEYPDCILFYRLGDFYEMFFEDATEVARELELTLTGKDCGLEERAPMCG 63
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ RLV G KV + +Q E + G R + + T T+ +
Sbjct: 64 VPYHAAETYINRLVQNGHKVAIAEQMEDPKLAK------GLVKREVVRIVTPGTITSTGV 117
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ NY++ + D R G+ +ISTGD E
Sbjct: 118 LADDKN------NYIISIF----------------YIDERFGLAICDISTGDFFVTELVS 155
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
+R + + P E++ I G +L
Sbjct: 156 --IRELFDEIQ-KYQPTEIICNHAFE---------------------------ISGISLE 185
Query: 325 EVMSLYENMGEDTLSN---NEDQNMDVPEQGNHRSAIE--GIMNMPDLAVQALALTIRHL 379
E+ Y N+ +L N +E ++D+ ++ S+IE G+ D + + A+ +R+L
Sbjct: 186 ELKKKY-NITITSLDNTYFSEKNSLDILKRHFAVSSIEALGLSEFSDATISSGAM-LRYL 243
Query: 380 KQFGLERIMC---LGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
+ +++ C +G S + M + ++ + LE++ + G+LL +++ T
Sbjct: 244 --YEMQKSSCAQIVGIS--AYKNGDYMIVDTSSRRNLELVETMREKKKNGSLLGVLDKTN 299
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
T G+R+LR ++ PL ++ I R +AV+E+ Y E + ++ + P
Sbjct: 300 TAMGARMLRGFLEQPLVNKERIINRQEAVAEL---FDRYIDREELREY---------LNP 347
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
+ D++R ++R+ + A + +++ ++ K + +
Sbjct: 348 IY---------------DLERLMSRVVTKNANTRDLLSLSASM----KMISPI------- 381
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA---ADQGDLLNLMIISNGQF 613
K KT S +K+ + + + +N+++ +G+++N G
Sbjct: 382 -KDVLKTFESGEIKKT--NNNLDRLHDIIDIIDRAINEDSPLSLKEGNIIN-----TGYN 433
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFK--VPLN 669
SE+ + R+A K L SL + +++ G++NL+ F V G + E+ +FK VP
Sbjct: 434 SEIDKLRQAKTEGKNWLASLESEEKEKTGIKNLKVKFNKVFG--YYFEVTNSFKDMVPDY 491
Query: 670 WAKVNSTKKTIRYHSPEVLTALDQLAL-ANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQ 728
+ + + RY + + L L+ + L A ++L + + E Q++ +
Sbjct: 492 FIRKQTLTNAERYTTDK-LKDLENIILGAEDKLNSLEYEVFVEIRDEIAKNVNRIQSSAK 550
Query: 729 ALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTNL 787
A+A +D L +LAT++ N N+V+P + + I I GRHPV++T+L D+ F+ NDT L
Sbjct: 551 AVAYIDALCSLATVAYNNNYVKP---EINTTGVIDIRDGRHPVVETMLNDDSFIANDTYL 607
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
++ IITGPNM GKS Y+RQ ALI +MAQ+GSFVPA A L V D I+TR+GASD
Sbjct: 608 DQNKKRMSIITGPNMAGKSTYMRQTALICMMAQIGSFVPAKQANLCVCDRIFTRVGASDD 667
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK--K 905
+ G+STF+ E+ E + ILRN T SLVI+DE+GRGTST DG+AIA+A ++++ K
Sbjct: 668 LASGQSTFMVEMTEVANILRNATRNSLVILDEIGRGTSTFDGLAIAWAVVEHISNIKLIG 727
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
LF THY ++++++ G V Y +S ++ ++ +L K++ G ++
Sbjct: 728 AKTLFATHYHELSELEGTLPG-VNNYCISV-----------KENGDNIVFLRKIITGGAD 775
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKL-EAEVSSRVQ 1002
S+G +VA+LA +P S +RA + +L A++++R +
Sbjct: 776 KSYGIQVAKLAGVPDSVTNRAKELIEELSSADIATRAR 813
>gi|218439471|ref|YP_002377800.1| DNA mismatch repair protein MutS [Cyanothece sp. PCC 7424]
gi|218172199|gb|ACK70932.1| DNA mismatch repair protein MutS [Cyanothece sp. PCC 7424]
Length = 885
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 256/953 (26%), Positives = 432/953 (45%), Gaps = 128/953 (13%)
Query: 62 TPKKPKLSPH-TLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+P+ P+++P + P + K TP+ Q VE+K +YP+ LL+ VG F F
Sbjct: 4 SPESPEITPEIATSKSPHTDYRQLDRTKLTPMYQHYVEVKEQYPNTLLVYRVGDFFECFF 63
Query: 121 EDAEMAAKVLGIY-------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETA 173
+DA A+ L + + MT +P L + R LV G+ V + Q E +
Sbjct: 64 QDAVTIAQELELVLTSKDGGREIGRIAMTG-VPHHALERYSRLLVEKGYAVAICDQVEDS 122
Query: 174 AIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
A A G+ R ++ L T TL D G + ++NYL VV
Sbjct: 123 AAAAAA-GRM--VERQITKLLTPGTLT---DEGMLQ---ARKNNYLAAVV---------- 163
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT 293
+ D + G+ +ISTG+ + + N S L LL L P+E+L+ P +
Sbjct: 164 --IAKDHW----GLAYADISTGEFLTTQSNH---LSSLTLELLRLQPSEILI--PTNAPD 212
Query: 294 EKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGE--DTLSNNEDQNMDVPEQ 351
LL G S+ +C DCF +L E T + +
Sbjct: 213 LNTLLR-PGEKSDYLADCLP-DCFCYSLRSQFPFTLNEAKPRLLTTFRVKSLEGLGCEHL 270
Query: 352 GNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQ 411
A G++ + +A + ++ LK + + + L R +
Sbjct: 271 PLAIRAAGGLLEYIEDTQKAYQVPLQPLKTYNIAEFLILDYPSR---------------R 315
Query: 412 QLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAES 471
LE+ + + S YG+LL ++ T+T G R LRRW+ PL D I+AR + + E+ E+
Sbjct: 316 NLEITQTVRDNSFYGSLLWALDRTVTAMGGRALRRWLIEPLLDIKGITARQNTIEELKEN 375
Query: 472 MGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSE 531
P L +L + D++R R+ TA +
Sbjct: 376 ------------------------PTLRQDLRQLLREIY---DLERITGRVGAGTANARD 408
Query: 532 FIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKA--AKLL 589
+A+ Q+++ L QL G S L+ L S ++GK L+
Sbjct: 409 LLALAQSLVKL-TDLSQLASLGT-----------SPYLRALQKVPSELEILGKEVIGHLV 456
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ + G +I +G ++ R+ + ++ L +L R++ G+ NL+
Sbjct: 457 ESPPLHLKEGG------VIRDGINFQLDEMRRLYEEDQQWLANLEVTERQRTGVSNLKVG 510
Query: 650 SVSGITHLIELPANF--KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRA 707
+ + +P + + P N+ + + RY +PE+ ++ A ++L +
Sbjct: 511 YNKTFGYYLSMPRSKAEQAPDNYIRKQTLTNEERYITPELKERESRILNAKDDLNRLEYE 570
Query: 708 AWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSG 767
+ + AE + +A+AA+D L LA ++ +++ RP VD I I G
Sbjct: 571 IFAGLRTKVAEKAAEIRQVAKAVAAIDVLAGLAEIAVYQDYCRPEMVDGR---LIEIVDG 627
Query: 768 RHPVLDTIL-LDNFVPNDTNLHA---EREYCQII--TGPNMGGKSCYIRQVALIGIMAQV 821
RHPV++ L FVPN T L + E+ Y +I TGPN GKSCY+RQV LI +MAQ+
Sbjct: 628 RHPVVEQSLGAGFFVPNSTYLGSLLEEQNYPDLIILTGPNASGKSCYLRQVGLIQLMAQI 687
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
GSFVPA +A+L + D I+TR+GA D + G+STF+ E+NE + IL + T++SLV++DE+G
Sbjct: 688 GSFVPAKTAKLGICDRIFTRVGAMDDLATGQSTFMVEMNETANILNHATSRSLVLLDEIG 747
Query: 882 RGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKV 941
RGT+T DG++IA+A +YL + +F THY ++ ++ + + +V Y V+
Sbjct: 748 RGTATFDGLSIAWAVAEYLAAEIQSRTIFATHYHELNELASILS-NVANYQVTV------ 800
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+ ++ +L++V PG ++ S+G + +LA LP I RA + ++E
Sbjct: 801 -----KEMPNEIIFLHQVRPGGADKSYGIEAGRLAGLPAVVIDRAKQVMTQIE 848
>gi|386861179|ref|YP_006274128.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1026b]
gi|418533613|ref|ZP_13099475.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1026a]
gi|418544792|ref|ZP_13110064.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1258a]
gi|418551785|ref|ZP_13116690.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1258b]
gi|385346858|gb|EIF53531.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1258b]
gi|385348086|gb|EIF54725.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1258a]
gi|385360896|gb|EIF66800.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1026a]
gi|385658307|gb|AFI65730.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1026b]
Length = 889
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 256/926 (27%), Positives = 411/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A A
Sbjct: 19 HTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 78
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 79 GVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 132
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 133 LLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAELA 176
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 177 PDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQRL 226
Query: 324 A---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
EV SL + G L++ + G + + A Q L RH++
Sbjct: 227 CDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHVR 269
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+E + S + L +T + LE L G+E TL +++ T G
Sbjct: 270 SLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAMG 316
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLLR W+ HP AR A+ + ++ + G
Sbjct: 317 SRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG------------------ 352
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L S+ ++L + D++R R+ +A P + ++ ++ A L RE+V
Sbjct: 353 -LDSLRSALRQIADVERITGRLALLSARPRD-LSSLRDTFAALPAL---------RERVA 401
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEV 616
++A L RL P G L + E A D G +I+ G +E+
Sbjct: 402 EIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAEL 453
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 454 DELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 513
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + Q LA LD
Sbjct: 514 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAELD 573
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 574 LLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKLL 629
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRST
Sbjct: 630 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRST 688
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF THY
Sbjct: 689 FMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHY 748
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 749 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVAQ 796
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 797 LAGVPAPVIRAARKHLAHLEQQSAAQ 822
>gi|338176045|ref|YP_004652855.1| DNA mismatch repair protein MutS [Parachlamydia acanthamoebae UV-7]
gi|336480403|emb|CCB87001.1| DNA mismatch repair protein mutS [Parachlamydia acanthamoebae UV-7]
Length = 849
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 182/612 (29%), Positives = 309/612 (50%), Gaps = 73/612 (11%)
Query: 400 SMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLIS 459
S ++L TL+ LE++ ++GS TLL +++H+ T G+RLLR+W+ PL I
Sbjct: 272 SQYLSLDRMTLRHLELIDPLNHGSRKNTLLGVLDHSNTPMGARLLRQWIKQPLLSIPEIH 331
Query: 460 ARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLG----RSPDI 515
R +AV Q +Y S++ +G + D+
Sbjct: 332 QRQEAV-------------------------------QAFYDTPSLMQRIGAVLEQVRDL 360
Query: 516 QRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILT 575
+R + RI ATP + +A+ ++ + L ++ KTL L + L
Sbjct: 361 ERLMMRISSGYATPRDLVALR----FSMEPLPEI------------KTLLLTLASQSALL 404
Query: 576 ASSPAVIGKAAKLLSTVNKEAADQG--DLLNLMIISNGQFSEVARARKAVQSAKEELDSL 633
A+ I ++ + D + I +G E+ R+ + +K +
Sbjct: 405 ATEAQRIDFLPEMTRLIANALVDDPPVKITEGKIFRDGYHPELDELREISRDSKSWIARY 464
Query: 634 INMCRKQLGMRNLEFMSVSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTAL 691
R + G+++L+ + IE+ K+P ++ + + R+ +PE+
Sbjct: 465 QTQIRDETGLKSLKVGFNRMFGYYIEVSKGQAEKMPDSFQRRQTLVNAERFITPELKNYE 524
Query: 692 DQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRP 751
++ A E ++ + + + ++ G + + QALA +DCL +L +R ++RP
Sbjct: 525 AKVLNAEERISAIENELFQTLRQQIGQFSKQVLTTAQALARIDCLRSLGEAARTNQYIRP 584
Query: 752 VFVDDHEPVQIHICSGRHPVLDTILL-DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIR 810
+ VDD + I GRHPV++ + F+PNDT L +ITGPNM GKS YIR
Sbjct: 585 L-VDD--SAHLKIVDGRHPVIEAAHAGEKFIPNDTLLDGSDNRLLLITGPNMAGKSTYIR 641
Query: 811 QVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCT 870
QVALI IMAQ+GSF+PA A + ++D ++TR+GASD + +G+STF+ E+ E + IL N T
Sbjct: 642 QVALITIMAQMGSFIPAKEAHVGLIDKVFTRIGASDDLSRGQSTFMVEMVETANILHNAT 701
Query: 871 AQSLVIVDELGRGTSTHDGVAIAYATLDYLL--EHKKCMVLFVTHYPKIADIKTKFTGSV 928
++SLVI+DE+GRGTST+DG++IA++ ++LL E K LF THY ++ ++ K G+V
Sbjct: 702 SRSLVILDEIGRGTSTYDGISIAWSVAEHLLITEGKMAKTLFATHYWELTKLEEKIPGAV 761
Query: 929 GTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATV 988
Y+V+ ++ ++ +L K++ G ++ S+G V +LA LPPS I+RA
Sbjct: 762 N-YNVAV-----------QENADNIIFLRKIIKGGTDKSYGIHVGRLAGLPPSVITRAKE 809
Query: 989 IAAKLEAEVSSR 1000
I LE + +
Sbjct: 810 ILVHLEENANQK 821
>gi|237809472|ref|YP_002893912.1| DNA mismatch repair protein MutS [Tolumonas auensis DSM 9187]
gi|237501733|gb|ACQ94326.1| DNA mismatch repair protein MutS [Tolumonas auensis DSM 9187]
Length = 865
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 256/935 (27%), Positives = 412/935 (44%), Gaps = 158/935 (16%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----- 133
P S TTH TP+ QQ + LK ++PD+LL +G + F +DA AA++L I
Sbjct: 8 PQSLTTH----TPMMQQYLGLKAQHPDILLFYRMGDFYELFYDDARKAAELLDISLTKRG 63
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
A +P + ++ RLV G V + +Q A GP R + +
Sbjct: 64 QSAGQPIPMAGVPYHAVEGYLSRLVQLGESVAICEQIGDPATSK------GPVERKVVRI 117
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T TL + +D N +V V D G+ A++++
Sbjct: 118 ITPGTLTDEALLNERQD------NLIVAV----------------DFVAPHYGLAAMDVA 155
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G V +F + L A L L+PAELL + T+ G +R A
Sbjct: 156 SGRFVINQFTR---QETLAAELQRLNPAELLYSENFPDLTQ------LGQRRGMRRRPAW 206
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALA 373
+E L N+ + D+ G I A AL
Sbjct: 207 E---------------FEFSTSYHLLCNQFETQDLRGFGVEEEKIAL------QAAGALL 245
Query: 374 LTIRHLKQFGLERIMCLGASFRSLSGSMEMT-LSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+R ++ L I + L S +M + A T + LE+ N S G + TL ++
Sbjct: 246 QYVRDTQRTALPHIQGI-----RLEKSEQMVVMDAATRRNLELTGNLSGGFD-NTLAAVL 299
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
+ T T GSRLL+RW+ P+ +N + R D ++E+
Sbjct: 300 DATATPMGSRLLKRWLHQPIRSKNQLQQRQDVITEL------------------------ 335
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF---------IAVMQAILYAG 543
++ Q L VL +G D++R I R+ R+A P + + +Q IL
Sbjct: 336 -LDQQMMSALMPVLKQIG---DVERIIARLALRSARPRDLSRLRVAFQQLPELQIILQNN 391
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
LQQL + +++ LL+R ++ +P V+ + D G
Sbjct: 392 PTLQQLA------QAISTFPELQELLERAVV--ENPPVVLR-------------DGG--- 427
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELP 661
+I++G E+ R A L+ L R++ G+ L+ + V G +
Sbjct: 428 ---VIASGYHPELDELRDLENGATRYLEQLELRERQRTGITTLKVSYNKVHGFYIDVTKA 484
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
VP+++ + + K RY PE+ D++ A + + ++ L + +
Sbjct: 485 NAHLVPVDYIRRQTLKNNERYLIPELKEYEDKVLTAQSRALALEKQLYEDLLDQLLPHLP 544
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
Q + A+A LD L+ LA ++ ++ RP VD EP I I +GRHPV++ L F+
Sbjct: 545 ALQVSAAAVAELDVLNNLAERAQTLDYHRPELVD--EP-GIQIKAGRHPVVEQSLQTPFI 601
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
ND L+ R IITGPNMGGKS Y+RQ ALI ++A +GS+VPA +A + +D I+TR
Sbjct: 602 ANDLQLNDLRRML-IITGPNMGGKSTYMRQTALIVLLAYIGSYVPAEAARIGPIDRIFTR 660
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GASD + GRSTF+ E+ E + IL N T QSLV++DE+GRGTST+DG+++A+A + L
Sbjct: 661 IGASDDLASGRSTFMVEMTETANILHNATHQSLVLMDEIGRGTSTYDGLSLAWACAEQLA 720
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVV 960
+ LF THY ++ + + V + D+ D V +++ V
Sbjct: 721 QKINAYTLFATHYFELTQLAEQQANIVNVH-------------FDAIEHGDSVAFMHTVQ 767
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
G + S+G +VA LA +P + I++A +LE+
Sbjct: 768 EGAANRSYGIQVAALAGVPRAVINQARAKLHELES 802
>gi|237812977|ref|YP_002897428.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei MSHR346]
gi|237505980|gb|ACQ98298.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei MSHR346]
Length = 894
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 256/926 (27%), Positives = 412/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A A
Sbjct: 23 HTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 82
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 83 GVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 136
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 137 LLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAELA 180
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 181 PDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQRL 230
Query: 324 A---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
EV SL + G L++ + G + + A Q L RH++
Sbjct: 231 CDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHVR 273
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+E + S + L +T + LE L G+E TL +++ T G
Sbjct: 274 SLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAMG 320
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLLR W+ HP AR A+ + ++ + G
Sbjct: 321 SRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG------------------ 356
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L S+ ++L + D++R R+ +A P + ++ ++ A L RE+V
Sbjct: 357 -LDSLRSALRQIADVERITGRLALLSARPRD-LSSLRDTFAALPAL---------RERVA 405
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEV 616
++A L RL P G L + E A D G +I+ G +E+
Sbjct: 406 EIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAEL 457
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 458 DELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 517
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + Q LA LD
Sbjct: 518 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAELD 577
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L++ER+
Sbjct: 578 LLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNSERKLL 633
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRST
Sbjct: 634 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRST 692
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF THY
Sbjct: 693 FMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHY 752
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 753 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVAQ 800
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 801 LAGVPAPVIRAARKHLAHLEQQSAAQ 826
>gi|378824626|ref|YP_005187358.1| DNA mismatch repair protein mutS [Sinorhizobium fredii HH103]
gi|365177678|emb|CCE94533.1| DNA mismatch repair protein mutS [Sinorhizobium fredii HH103]
Length = 915
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 260/940 (27%), Positives = 430/940 (45%), Gaps = 156/940 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ +Q +E+K PD LL +G + F +DA A++ LGI HL +
Sbjct: 30 TPMMEQFIEIKANNPDSLLFYRMGDFYELFFQDAVEASRALGITLTKRGQHLGQDIPMCG 89
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + ++++L+ GF+V V +Q E A +A G R + L T T+
Sbjct: 90 VPVHAADDYLQKLIALGFRVAVCEQVEDPA-EARKRGSKSVVRRDVVRLVTPGTIT---- 144
Query: 205 VGGGEDG--CGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
ED E+NYL+ + +IR+G + + ++ISTG E
Sbjct: 145 ----EDKLLSPSETNYLMAL-------ARIRSGS-----EPAYALAWIDISTGIFRLAET 188
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+ S L A +L + P EL+L + E P +V +G A
Sbjct: 189 AE----SRLLADILRVEPRELILPDTVFHDPELR------PVFDV----------LGRVA 228
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
+ + L+++ T + DV ++G + A + I ++++
Sbjct: 229 VPQPAVLFDSA---TAEGRIARYYDV-------KTLDGFGTFSRAELAAASAAISYVEKT 278
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
++ LG R S + + + T LE+++ S G+ GTLL ++ T+T G+R
Sbjct: 279 QIQERPALGIPERE-SAASTLFIDPATRANLELVKTLS-GAREGTLLRALDRTVTSGGAR 336
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LL + PL D + I+ RLD++ +V + +P F
Sbjct: 337 LLAERLMSPLTDPDRINQRLDSI------------------------EVLLDQPSFAM-- 370
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
V +L R+PD+ R ++R+ P + A+ QA L A VT+
Sbjct: 371 -DVRDTLRRAPDMPRALSRLALGRGGPRDLGAI-QAGLRAAT--------------VTAT 414
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKA 622
L A L LT + A++ A LL+ ++ A+ LL +G F R+
Sbjct: 415 LLSGARLSEE-LTEAHAAIVALPASLLARLDSMLAEDLPLLK----RDGGF-----LREG 464
Query: 623 VQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHL-----------IELPANFKVPLNWA 671
+E+ +L + R+ + L++ +GI L IE+ A +
Sbjct: 465 ASGELDEMRALRDQSRRVIAGLQLQYSEETGIKSLKIKHNNVLGYFIEVTAGNAGAMTDT 524
Query: 672 KVNSTK--------KTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ +R+ + E+ ++A A + + A+++ +E
Sbjct: 525 DAGRARFIHRQTMASAMRFTTTELAELETKIANAADRALAIELEAFEAMAREVVADAEAI 584
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL----LDN 779
+ A ALA LD LA L+ +N RPV DH + + I GRHPV++ L +
Sbjct: 585 KTAALALATLDVSAGLAVLAEEQNHARPVV--DHSRMFL-IDGGRHPVVEQALRRQAANP 641
Query: 780 FVPNDTNLHA----EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
FV N +L E ++TGPNMGGKS ++RQ ALI IMAQ+GSFVPA++A + ++
Sbjct: 642 FVANGCDLSPPDGPEAGAIWLLTGPNMGGKSTFLRQNALIAIMAQMGSFVPANAAHVGIV 701
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D +++R+GASD + +GRSTF+ E+ E + IL T +SLVI+DE+GRGT+T DG++IA+A
Sbjct: 702 DRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRGTATFDGLSIAWA 761
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVT 954
+++L E +C LF TH+ ++ + K S T V + D DV
Sbjct: 762 AVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMRV-------------KEWDGDVI 808
Query: 955 YLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+L++V PG ++ S+G +VA+LA LP S ++RA + AKLE
Sbjct: 809 FLHEVGPGAADRSYGIQVARLAGLPASVVARARDVLAKLE 848
>gi|408416568|ref|YP_006627275.1| mismatch repair protein [Bordetella pertussis 18323]
gi|401778738|emb|CCJ64185.1| mismatch repair protein [Bordetella pertussis 18323]
Length = 883
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 268/935 (28%), Positives = 420/935 (44%), Gaps = 136/935 (14%)
Query: 78 TPSSQTTHNK--KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH 135
TP QTT + +TP+ QQ + LK + +LL +G + F EDAE AA++L +
Sbjct: 4 TPK-QTTGDALAGHTPMMQQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERAARLLNLTLT 62
Query: 136 LDHN-----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRG 189
N A IP + ++ RLV G V + +Q + AA K GP R
Sbjct: 63 KRGNSNGTPIPMAGIPVHAMEQYLARLVALGESVAICEQIGDPAAAK-------GPVERR 115
Query: 190 LSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVA 249
+ + T TL + D + VCV GK + R G+
Sbjct: 116 IVRIVTPGTLTDEALLPAKAD----RALAAVCVT------GK---------REPRAGLAW 156
Query: 250 VEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRV 309
+ +++G E + LE+ L ++PAEL+ Q E L A + RV
Sbjct: 157 LNLASGAFHVTECAP----AQLESELHRIAPAELI-------QAESAELHMAFEGARTRV 205
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
F GA A++++ ++ D+L + ++M +A+ + A
Sbjct: 206 PDWH---FEADGARAQLLAHFKT---DSLGGFDVEDMP--------AAVCAAGALLRYAA 251
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
+ + + H++ ER + L T + LE L +G E TL
Sbjct: 252 RTQSQALAHVQTIAAER------------PGQYVLLDPVTRRNLE-LTQTLSGEESPTLF 298
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+++ T GSRLLRRW+ HPL + + AR A++ + T+ G+ +
Sbjct: 299 SLLDGCRTPMGSRLLRRWLHHPLRENEPVLARQHAIATML-------TARQEGEQAFAAA 351
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
+L ++ +L PDI+R R+ R+ P E ++ A+ L
Sbjct: 352 G----------LLETLRDALNAFPDIERIAARVALRSVRPRELASLRDALAALPALHASL 401
Query: 550 H-IDGEYREKVTSKTLH-----SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+ G R + + L LL R + AS PAV + D G
Sbjct: 402 TPLPGSPRARELAAQLAMPPDIGELLARAV--ASEPAVAIR-------------DGG--- 443
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELP 661
+I+ G SE+ R + L L R++ G+ NL EF V G +
Sbjct: 444 ---VIAAGFDSELDELRALATDGGDFLVQLEARERERTGIGNLRVEFNRVHGFYIEVTKG 500
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
KVP ++ + + K RY +PE+ T D++ A + + ++ L Y
Sbjct: 501 QTDKVPEDYRRRQTLKNAERYITPELKTWEDRVLSAQDRSLAREKWLYEQLLDALAQYVR 560
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
ALA LD L ALA +R ++V P +D E I I +GRHPV++ + + F
Sbjct: 561 PLSQCASALAELDTLAALAEHARRHDWVAPELIDGAE---IDIEAGRHPVVERAI-ERFT 616
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PN L R +ITGPNMGGKS Y+RQVALI ++A+ GSFVPA+ A + LD I+TR
Sbjct: 617 PNGCRLDQTRRML-LITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLDRIFTR 675
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA+D + GRSTF+ E+ EA+ IL T SLV++DE+GRGTST+DG+A+A+A LL
Sbjct: 676 IGAADDLAGGRSTFMMEMTEAAAILAASTPASLVLMDEIGRGTSTYDGLALAWAIAYRLL 735
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
H + + LF THY ++ T+ T +L + + G + +L++V
Sbjct: 736 THNRALTLFATHYFEL----TRLPAEQPTAANVHLAAAESAG--------GIVFLHEVRE 783
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G + S+G +VAQ A +P + I +A+ +LEA+
Sbjct: 784 GPASRSYGIQVAQRAGVPAAVIRQASRELERLEAQ 818
>gi|332799274|ref|YP_004460773.1| DNA mismatch repair protein mutS [Tepidanaerobacter acetatoxydans
Re1]
gi|332697009|gb|AEE91466.1| DNA mismatch repair protein mutS [Tepidanaerobacter acetatoxydans
Re1]
Length = 869
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 271/939 (28%), Positives = 431/939 (45%), Gaps = 176/939 (18%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY---AHLDHNFMTASIP 146
TP+ QQ E+K KY D ++ +G + F +DA + +K L I D+ A +P
Sbjct: 3 TPMIQQYKEIKDKYRDYIVFFRLGDFYEMFFDDAYICSKELEITLTSRDSDNKVPMAGVP 62
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVG 206
+ ++ +LV G+KV + +Q E + G R + + T T+ D+
Sbjct: 63 YHAADQYIAKLVAKGYKVVICEQVEDPKLAK------GIVKREVVKIVTPGTIT---DLN 113
Query: 207 GGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGF 266
E+ ++NYL CV F + + L V D++ GEF+
Sbjct: 114 ALEEN---KNNYLGCV--------------FKNKHEFGLAFV-------DLMTGEFDITN 149
Query: 267 LRSGL---EAV--LLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDC--FIG 319
L+S E + + SP E L LS+ EK L N+++ RD F
Sbjct: 150 LKSSYPYHEIINEVSRFSPRECLANHELSQ--EKSL--NRKLKENLKLCFTFRDATYFDE 205
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
AL +MS + GE+ + E N + A+ +A A +
Sbjct: 206 QSALILLMSQF---GEEKIKKLE----------NRKPAL--------IAAGACLRYLNET 244
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
++ L I + SF M + + + LE+ N + + G+LL +M+ T T
Sbjct: 245 QKLNLSHINSI--SFYENHDFMVLDFICS--KNLEITENLRDRKKTGSLLWVMDKTSTAM 300
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
G+RLLR+W+ PL D I R DA+ E+ +
Sbjct: 301 GARLLRKWLEQPLLDILKIKQRQDAIEELFND---------------------------F 333
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL-HIDGEYREK 558
++ S + L DI+R ++ A + +A+ I K L Q+ HI +
Sbjct: 334 FLRSDLKEQLKNIYDIERLSGKLVCGNANARDLLAIKNTI----KSLPQIKHI----LTR 385
Query: 559 VTSKTLHS-----------ALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
SK LH LL + P I +A +
Sbjct: 386 CNSKLLHQIYEQLDPLEDICLLLEKSIFEDPPLTIKEAN--------------------V 425
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANF 664
I +G SE+ RKA + K + L R+ G+++L+ F V G + IE+ +N
Sbjct: 426 IKDGYNSEIDMLRKASREGKAWIADLERKERESTGIKSLKIGFNKVFG--YYIEVTKSNL 483
Query: 665 K-VPLNWAKVNSTKKTIRYHSPEVLTALDQLAL-ANEEL-----TIVCRAAWDSFLKEFG 717
VP N+ + + RY + E L + L L ANE+L + C D +KE
Sbjct: 484 SMVPENYIRKQTLANAERYITEE-LKEYESLILNANEKLQELEYNLFCEIR-DQLIKEI- 540
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRP-VFVDDHEPVQIHICSGRHPVLDTIL 776
+ + L+ LD L +LA +S + N+++P V + D +I+I GRHPV++
Sbjct: 541 ---PRLKQSAYNLSLLDVLLSLAEVSYSNNYIKPEVNLSD----EINIIDGRHPVVELTQ 593
Query: 777 LDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
+ F+PNDT + +ITGPNM GKS Y+RQVALI +MAQ+G F+PA A++ ++
Sbjct: 594 KEELFIPNDTQIDCSDNLISVITGPNMAGKSTYMRQVALIVLMAQIGCFIPAKKAKIGIV 653
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D I+TR+GASD++ G+STF+ E+ E + IL N T +SL+I+DE+GRGTST DG++IA+A
Sbjct: 654 DRIFTRIGASDNLALGQSTFMVEMTEVADILNNATNKSLLILDEVGRGTSTFDGLSIAWA 713
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTY 955
++Y+ ++ K LF THY ++ +K K G V Y ++ + K D DV +
Sbjct: 714 VIEYIQKNLKAKTLFATHYHELTALK-KLKG-VKNYKIT----------VKEKGD-DVIF 760
Query: 956 LYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
L K+VPG ++ S+G +VA+LA +P + I+RA I LE
Sbjct: 761 LRKIVPGEADKSYGIQVAKLAGVPNAVINRARKILVDLE 799
>gi|182415560|ref|YP_001820626.1| DNA mismatch repair protein MutS [Opitutus terrae PB90-1]
gi|177842774|gb|ACB77026.1| DNA mismatch repair protein MutS [Opitutus terrae PB90-1]
Length = 855
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 264/952 (27%), Positives = 421/952 (44%), Gaps = 178/952 (18%)
Query: 88 KYTPLEQQVVELKTKYP-DVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIP 146
K TP+ QQ E++ P D L+ +G F F +DA +++LG+ +F IP
Sbjct: 7 KLTPMMQQYFEVRRGLPKDTFLLFRLGDFFEMFFDDAIAGSRLLGLTLTKRQDFPMCGIP 66
Query: 147 TFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAEDV 205
+ +V +L+ AG KV + Q E P KAG R L+ + + T AA +
Sbjct: 67 AHAADTYVTKLLAAGKKVALCDQAE--------PAKAGKLVRRQLTRILSPGTTLAANQL 118
Query: 206 GGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDG 265
N+ +C + D +LG+ A + D+ GEF
Sbjct: 119 DAAR-------NHYLCALAYD-----------------KLGLHAAWL---DLSTGEFKVA 151
Query: 266 FLRS--GLEAVLLSLSPAELLLGQPLSKQTEKMLLAY-AGPASNVRVECASRDCFIGGGA 322
S L VL +L PAELL+ E L + A P V C G
Sbjct: 152 TDPSIANLLPVLTALDPAELLV-------IEGELARWQATPHDQTAVHALHAFC---SGR 201
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRH---- 378
L ++ Y + D G G++N+ Q L H
Sbjct: 202 LCSELAGY--------------HFDTATGGKTVMDTLGVLNL-----QGFGLAHTHPALG 242
Query: 379 ----LKQFGLERIMCLGASFRSLS---GSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHI 431
+ + E + + R+L + + L TL+ LE+ + G E G+L
Sbjct: 243 PAGAVVYYATENLCAKPENLRTLQEYRSARTLLLDPATLRNLEIFASARGGRE-GSLFGA 301
Query: 432 MNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDV 491
+N T+T G+RLL RW+ P + I R V+E+
Sbjct: 302 INRTVTPAGARLLERWLAAPTLELPEIIRRQTLVAEL----------------------- 338
Query: 492 TIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI 551
+ +P L LT++ DI R + R+ +R P E V + QL L
Sbjct: 339 -LAQPMRLLALRESLTNVR---DIPRILGRLQNRLRNPRELGGVRDTL----AQLPSL-- 388
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ--GDLLNLMIIS 609
R ++T+ ++ + + + A L + + AD+ DL + I
Sbjct: 389 ----RAELTAFGSSQ--------LSALSSQLQEFAHLRELLPRALADELPADLADGNYIR 436
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VP 667
+G +E+ R R K L L +++ G+R+L+ + + IE+ AN VP
Sbjct: 437 SGYDAELDRLRSLTSDNKTWLSDLERTEQERTGIRSLKVRFTNNFGYYIEVTKANLHLVP 496
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
++ + +T RY + AL +E I A ++ +EF + A A +
Sbjct: 497 SDYIRRQTTVGGERYVTE---------ALRQKEKEIF-HAEENALAREFELFNALVAAVL 546
Query: 728 ----------QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
+ALA LD L A L+R ++ +PV +DD + ++I GRHPV++ +L
Sbjct: 547 DESIALTHTAEALAELDVLCGWALLAREWDYCQPV-LDDSDVLEI--SEGRHPVVEQMLR 603
Query: 778 D-----------NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVP 826
FVPNDT L +ITGPNM GKS YIRQVALI ++AQ+G +VP
Sbjct: 604 SPDVTLPRGASAGFVPNDTALGCSEAQIALITGPNMAGKSTYIRQVALIALLAQIGCWVP 663
Query: 827 ASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTST 886
A S + ++D I++R+GASD + +G STF+ E+NE + IL N T +SL+I+DE+GRGTST
Sbjct: 664 AKSCRIGLVDRIFSRVGASDDLARGNSTFMVEMNETANILNNTTDRSLIILDEIGRGTST 723
Query: 887 HDGVAIAYATLDYLLEH--KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
+DG++IA+A +++L K LF THY ++ ++ +LT + +
Sbjct: 724 YDGLSIAWAVVEHLHRDPAKGPRTLFATHYQELTQLE------------KHLTRLRNLSV 771
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ + D+ ++ +V+PG ++ S+G +VA+LA LP S I RA I KLE++
Sbjct: 772 AVKEWNDDIVFVRRVIPGAADRSYGIQVARLAGLPLSVIDRAKTILGKLESD 823
>gi|89894338|ref|YP_517825.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense Y51]
gi|122483100|sp|Q24X61.1|MUTS_DESHY RecName: Full=DNA mismatch repair protein MutS
gi|89333786|dbj|BAE83381.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 862
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 314/623 (50%), Gaps = 75/623 (12%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
M L T + LE+ + + GTLL +++ T T +G RLLRRW+ PL + I RL
Sbjct: 261 MLLDPWTRRNLELTESIRGQGKKGTLLSVLDFTKTAFGGRLLRRWIEQPLLLKGEIEKRL 320
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
D V + E ++ ++ G+ D++R + ++
Sbjct: 321 DYVEALVEDS---------------------------FLRGDLIQLFGKVYDLERLMGKV 353
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
+ TA + +++ Q L QL+ L +G K L A PA+
Sbjct: 354 SYGTANARDLLSLAQT-LGVLPQLRALLAEG----------------KSEPLQAFIPALE 396
Query: 583 GK---AAKLLSTVNKEAA---DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
G AA L +N EA G+LL G E+ R K + L +M
Sbjct: 397 GLDPLAATLEQAINPEAPISLKDGNLLK-----AGYSVEIDELRSISSGGKAWVAKLESM 451
Query: 637 CRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
+ + G+R+L+ + IE+ AN +P + + + R+ +PE+ ++
Sbjct: 452 EKDRTGIRSLKVGYNKVFGYYIEVTHANSHLIPAEYIRKQTLANAERFITPELKEYEQKI 511
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
A E++T + + + G A+ A ALA +D +LA + ++ RPV
Sbjct: 512 LGAEEKVTQLEYQLFLELRETVRGQAAKILEAAHALAEIDVYTSLAEAAVRHHYSRPVMK 571
Query: 755 DDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
+ + I GRHPV++++L D +FVPNDT L E ++ +ITGPNM GKS Y+RQVA
Sbjct: 572 GEG---GLTIIEGRHPVVESMLQDTSFVPNDTIL-TEDKHLALITGPNMAGKSTYMRQVA 627
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
LI +MAQ+GSFVPA A + + D I+TR+GASD + G+STF+ E+ E ++ILR+ T QS
Sbjct: 628 LIVLMAQIGSFVPAQQATIPIADHIFTRVGASDDLASGQSTFMVEMYEVAHILRHVTPQS 687
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLL-EHKKCMVLFVTHYPKIADIKTKFTGSVGTYH 932
L+I+DE+GRGT+T+DG++IA+A +YL + K LF THY ++ D++ +G + H
Sbjct: 688 LIILDEVGRGTATYDGLSIAWAVAEYLAGQENKPKTLFATHYHELTDLEETHSG-IFNLH 746
Query: 933 VSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAK 992
V + +++ +L+K++PG ++ S+G +VA+LA LP + + RA +I +
Sbjct: 747 VGV-----------REHGEEIVFLHKIIPGRADRSYGIQVAKLAGLPANLLHRAKIILHE 795
Query: 993 LEAEVSSRVQNRSAKRDLLVKLS 1015
LE+ Q ++ +LS
Sbjct: 796 LESSAKESRQEHLFNKEKATQLS 818
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +K++ PD +L +G + FGEDA AA +L I +
Sbjct: 15 TPMMQQYKSIKSQAPDAILFFRLGDFYEMFGEDARTAAPILEIALTGRDSGGGERIPMCG 74
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTE 171
+P ++ ++ +LV+AG+KV + +Q E
Sbjct: 75 VPHHAVDGYLLKLVSAGYKVALCEQVE 101
>gi|261253951|ref|ZP_05946524.1| DNA mismatch repair protein MutS [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954907|ref|ZP_12597936.1| DNA mismatch repair protein MutS [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260937342|gb|EEX93331.1| DNA mismatch repair protein MutS [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342814478|gb|EGU49421.1| DNA mismatch repair protein MutS [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 859
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 305/598 (51%), Gaps = 75/598 (12%)
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L A T + LE+ +N + G++ TL +++HT T GSR+L+RW+ P+ D + ++ RLDA
Sbjct: 271 LDAATRRNLELTQNLAGGTD-NTLAEVLDHTATAMGSRMLKRWLHQPMRDIDTLNHRLDA 329
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
+SE+ E+ + L VL +G DI+R + R+
Sbjct: 330 ISELKEAA-------------------------LFGDLHPVLKQIG---DIERILARLAL 361
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
R+A P + M + +A +QL +L ++ HS L K A A + +
Sbjct: 362 RSARPRD----MARLRFAMQQLPEL-------SELMGSLNHSYLTK----LAQYAAPMDQ 406
Query: 585 AAKLLSTVNKEAA-----DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRK 639
+LL KE D G +I+ G +E+ RK A E L+ + R+
Sbjct: 407 VCELLERAIKENPPVVIRDGG------VIAEGYNAELDEWRKLADGATEYLEQMEQDERE 460
Query: 640 QLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALA 697
+ G+ L+ + +V G + + VP ++ + + K RY PE+ D++ +
Sbjct: 461 RHGIDTLKVGYNNVHGFFIQVSRGQSHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNS 520
Query: 698 NEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDH 757
+ + + W+ + + Q A++ +D L LA + + ++ RP
Sbjct: 521 KSKALALEKQLWEELFDLLLPHLEQLQNLASAVSQIDVLQNLAERADSLDYCRPSLT--K 578
Query: 758 EPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGI 817
EP IHI +GRHPV++ ++ + F+ N +L+ +R+ IITGPNMGGKS Y+RQ ALI +
Sbjct: 579 EP-GIHIQAGRHPVVEQVMDEPFIANPIDLNPQRKML-IITGPNMGGKSTYMRQTALIAL 636
Query: 818 MAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIV 877
MA +GS+VPA SA++ +D I+TR+GASD + GRSTF+ E+ E + IL N TA SLV++
Sbjct: 637 MAHIGSYVPAESAQIGSVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATANSLVLM 696
Query: 878 DELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLT 937
DE+GRGTST+DG+++A+A+ ++L + M LF THY ++ ++ + +
Sbjct: 697 DEIGRGTSTYDGLSLAWASAEWLAKELGSMTLFATHYFELTELPNQIPHLANVH------ 750
Query: 938 SHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+D+ D + +++ V G + S+G VA LA +P S I A +LE
Sbjct: 751 -------LDAVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKSVIKNARAKLTQLE 801
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
+K+TP+ QQ ++LK + PD++L +G + F +DA+ A+++L I A
Sbjct: 10 QKHTPMMQQYLKLKAENPDIMLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIP 69
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
A +P + ++ +LV G V + +Q A GP R + + T T+
Sbjct: 70 MAGVPFHAVEGYLAKLVQLGESVAICEQIGDPAT------SKGPVDRAVVRIVTPGTV 121
>gi|126454533|ref|YP_001066865.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1106a]
gi|242315681|ref|ZP_04814697.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1106b]
gi|126228175|gb|ABN91715.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1106a]
gi|242138920|gb|EES25322.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1106b]
Length = 939
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 253/913 (27%), Positives = 403/913 (44%), Gaps = 136/913 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
++TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A
Sbjct: 67 QHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKM 126
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A +P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 127 AGVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDA 180
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 181 ALLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAEL 224
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
L + LE + PAE+L + AG + RV D G
Sbjct: 225 APDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQR 274
Query: 323 LA---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
L EV SL + G L++ + G + + A Q L RH+
Sbjct: 275 LCDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHV 317
Query: 380 KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIY 439
+ +E + S + L +T + LE L G+E TL +++ T
Sbjct: 318 RSLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAM 364
Query: 440 GSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFY 499
GSRLLR W+ HP AR A+ + ++ + G
Sbjct: 365 GSRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG----------------- 401
Query: 500 YILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKV 559
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 402 --LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERV 449
Query: 560 TSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSE 615
++A L RL P G L + E A D G +I+ G +E
Sbjct: 450 AEIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAE 501
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKV 673
+ R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 502 LDELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRR 561
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ K RY +PE+ T D+ A E RA +D L+ + Q LA L
Sbjct: 562 QTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAEL 621
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
D L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 622 DLLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKL 677
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRS
Sbjct: 678 L-LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRS 736
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTH 913
TF+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF TH
Sbjct: 737 TFMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATH 796
Query: 914 YPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 973
Y ++ + +F + + + H ++ +L+ V G + S+G +VA
Sbjct: 797 YFELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVA 844
Query: 974 QLAQLPPSCISRA 986
QLA +P I A
Sbjct: 845 QLAGVPAPVIRAA 857
>gi|402311024|ref|ZP_10829979.1| DNA mismatch repair protein MutS [Eubacterium sp. AS15]
gi|400366146|gb|EJP19182.1| DNA mismatch repair protein MutS [Eubacterium sp. AS15]
Length = 853
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 239/937 (25%), Positives = 438/937 (46%), Gaps = 157/937 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFM 141
K TP+ +Q +++K KY D +L +G + F EDA +K+L I +
Sbjct: 2 KNLTPMMKQYLDIKDKYQDCILFFRLGDFYEMFFEDAIETSKLLDITLTGRACGNNEKAP 61
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLE 200
+P +++RL+N G KV + +Q + P + G R ++ + T T+
Sbjct: 62 MCGVPYHSAKSYIQRLINYGKKVAICEQIQ-------DPKEVKGIVDRAITKIITPGTVL 114
Query: 201 AAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
E + G + NY++ ++ + N+ EIS D+ G
Sbjct: 115 EDEMIQGSSN------NYIMSLISNGKNL---------------------EISYVDITTG 147
Query: 261 EFNDGFLR-SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIG 319
E N+ + + + +++P+E++ + K+ + SN+ E
Sbjct: 148 EVNNLTCNYNEIANIFFAVNPSEIIADESFYKKLSSEDFKNSKLISNLIDE--------- 198
Query: 320 GGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL 379
N+ ++ +S Q+ + E+ + A+E + ++L+ +++
Sbjct: 199 -----------NNIVQNVIS----QDSEDFEEFKEKYALEDVS-------ESLSWIYKYV 236
Query: 380 ---KQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEV---LRNNSNGSEYGTLLHIMN 433
+QF + F S M L TL+ LE+ +R NSN TL ++N
Sbjct: 237 YDTQQFFDKNF------FYQRSKQAYMYLDYYTLKNLEIVESIRRNSNN----TLFDVLN 286
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
T T GSR L++ + PL + I RL+ +S +
Sbjct: 287 KTNTSMGSRKLKQNLLKPLNSESDIKQRLEVLSCFVD----------------------- 323
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
E F +SS+L + D++R RI + + + + + + +++ K+L+ +
Sbjct: 324 -EYSFTMNISSILKEI---YDLERISNRIVYDSVSQKDLLNLKTSLI-CIKKLEDI---- 374
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG-DLLNLMIISNGQ 612
++EK + L+ + I + + +I + K + G DL I +
Sbjct: 375 -FKEKDNE---NFTLIYKNISSVNYAVIID-------LIEKSIEEMGEDLKYKHKIKSSY 423
Query: 613 FSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA----NFKVPL 668
++A RK + ++ + L + R++ G++NL+ + IE+ N K+P
Sbjct: 424 DEKLAYYRKLMDNSSDILIKMEAEEREKTGIKNLKINYNKVFGYYIEISKGALQNAKIPE 483
Query: 669 NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLK-EFGGYYAEFQAAV 727
++ + + + R+ + + L ++Q L+ + + + S +K E Y
Sbjct: 484 DYERRQTLVSSERFIN-QSLKEIEQEMLSARQSEVSLENSLYSQVKDEIKKYIDRIMRLA 542
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN-FVPNDTN 786
+A +D +L+ + ++V+P+ D++ + I +GRHPV++ IL D+ FVPNDT
Sbjct: 543 SIVADVDVYTSLSKTAIENDYVKPMIAVDNKLI---IKNGRHPVIEKILTDDGFVPNDTI 599
Query: 787 LHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASD 846
+ E+ IITGPNM GKS Y+RQVALI +MA +GS+VPAS A + ++DGIYTR+GASD
Sbjct: 600 VDDEK--THIITGPNMAGKSTYMRQVALIVLMAHIGSYVPASFASIPIIDGIYTRIGASD 657
Query: 847 SIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC 906
+ G+STF+ E++E S IL+N T +SLVI+DE+GRGTST+DG+++A+A ++Y+ + K
Sbjct: 658 DLSMGQSTFMVEMSEVSNILKNATEKSLVILDEIGRGTSTYDGMSLAFAIVEYIASNIKA 717
Query: 907 MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSES 966
L THY ++ ++++F ++ Y M ++ +L K+V G ++
Sbjct: 718 KTLVSTHYHELTSLESRF-DNIKNY------------CMLVDDTTEIKFLKKIVEGRADK 764
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
S+G VA LA +P + RA VI ++LE + V N
Sbjct: 765 SYGIHVAMLADIPYEVLERANVILSRLETKEKKSVSN 801
>gi|134277623|ref|ZP_01764338.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 305]
gi|134251273|gb|EBA51352.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 305]
Length = 894
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 256/926 (27%), Positives = 411/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A A
Sbjct: 23 HTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 82
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 83 GVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 136
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 137 LLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAELA 180
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 181 PDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQRL 230
Query: 324 A---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
EV SL + G L++ + G + + A Q L RH++
Sbjct: 231 CDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHVR 273
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+E + S + L +T + LE L G+E TL +++ T G
Sbjct: 274 SLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAMG 320
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLLR W+ HP AR A+ + ++ + G
Sbjct: 321 SRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG------------------ 356
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L S+ ++L + D++R R+ +A P + ++ ++ A L RE+V
Sbjct: 357 -LDSLRSALRQIADVERITGRLALLSARPRD-LSSLRDTFAALPAL---------RERVA 405
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEV 616
++A L RL P G L + E A D G +I+ G +E+
Sbjct: 406 EIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAEL 457
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 458 DELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 517
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + Q LA LD
Sbjct: 518 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAELD 577
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 578 LLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKLL 633
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRST
Sbjct: 634 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRST 692
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF THY
Sbjct: 693 FMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHY 752
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 753 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVAQ 800
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 801 LAGVPAPVIRAARKHLAHLEQQSAAQ 826
>gi|124506031|ref|XP_001351613.1| DNA repair protein, putative [Plasmodium falciparum 3D7]
gi|23504540|emb|CAD51420.1| DNA repair protein, putative [Plasmodium falciparum 3D7]
Length = 1350
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 260/1030 (25%), Positives = 454/1030 (44%), Gaps = 197/1030 (19%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS---- 144
YTP QQ ++K++ D ++ ++G + F DA + + + N+M+
Sbjct: 405 YTPGMQQFWKIKSRNFDKIIFFKMGRFYEIFYIDACLMHTICSL------NWMSGEHKPH 458
Query: 145 --IPTFRLNVHVRRLVNAGFKVGVVKQTET-AAIKAHGPGKAGP----FGRGLSALYTKA 197
P L+ + ++++N+G KV V++Q ET ++ GP R ++ +YTK
Sbjct: 459 LGFPEQSLHFYAKKVINSGHKVVVIEQMETPKELEQRNKESIGPKDKAIKREINEIYTKG 518
Query: 198 TLEAAEDVGGGEDGCGGESNYLVCV-VDDDGNVGKIRNGV-------------------- 236
T+ ++ E+ YLVC D+ N+ + N +
Sbjct: 519 TI-------LHDNMLSAETKYLVCFYFDEIENMTNVNNNIKDNDDDHNNIKDNDDDHNNI 571
Query: 237 --------------------FGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLL 276
+ + G V +I+T + G ND R L +L
Sbjct: 572 KDNNDDHNNIKDNNNYTFSQYDNKNKCNFGFVVSDIATSYIAVGYCNDDESRIVLRTILA 631
Query: 277 SLSPAELLLGQPLSKQTEKMLLA-YAGPASNVRVECASRDCFIGGGALAEVMSLYENMGE 335
L PAE+L SK K +L+ + ++ + C + I + E+ +ENM
Sbjct: 632 QLCPAEILYS---SKNINKEVLSIFKNIPTSPELTCLNSFPNIIS-SFDEINKYFENMP- 686
Query: 336 DTLSNNEDQNMDV-PEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
N+++ EQ + A G + + +++L L + + C +
Sbjct: 687 --------SNLEIYKEQTSVICAFGGFI----VYLRSLLLDKKIFR-------FCKIEKY 727
Query: 395 RSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCD 454
M L A L+ LE+L S G +L +N T T +G+R LRRW+ PL D
Sbjct: 728 DLFKRETYMVLDATALKHLEILETQS-GDTKNSLYDYVNKTCTNFGARNLRRWICSPLLD 786
Query: 455 RNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPD 514
I RLD V + KN++ ILS + L + PD
Sbjct: 787 CEKIRERLDVVDFL------------------KNNE---------QILSLIRMKLKKLPD 819
Query: 515 IQRGITRIFHRTATPSEFIAV------------MQAILYAGKQLQQLHIDGEYREKVTSK 562
I+R + +I + A+ SE AV L A K++ + ID E+
Sbjct: 820 IERLLNKICIQ-ASQSERGAVFFDNVVNTKLKEFVTFLNAFKEIDTMLIDVNRIER---- 874
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISN------------ 610
L RL ++P + K G N+ +I+N
Sbjct: 875 --DGELPSRLFQICNTPDICKDNIK------------GSYPNIGLITNEFLEKIYFDGDK 920
Query: 611 ------GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
G ++ + + ++ + +L++++ R QL + L+F+ + + +E P N
Sbjct: 921 EYKPAEGCDEDIDKINEKEKNVENKLNNVLEHMRTQLKIPTLKFVH-AKFKYEVECPDNI 979
Query: 665 -KVPLNWAKVNSTKK-TIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
K L ++ S KK +R H+ E+ + +++L +E + F +Y +
Sbjct: 980 PKSFLKNVEITSAKKGYVRIHNDEIKSLVEKLEDIEQEKKDAIYPFFQKLFHLFYAHYEK 1039
Query: 723 FQAAVQALAALDCLHALATLSRNKNF--VRPVFV-------DDHEPVQIHICSGRHPVLD 773
+ +A + +A LDCL + A + N F RP+ ++ P I + HPV+
Sbjct: 1040 YVSACRLVAELDCLQSFAYVVLNTAFPLTRPILHPMDSKQGEEKTPFLI-LEDNIHPVV- 1097
Query: 774 TILLDNFVPNDTNL--HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAE 831
+L+ NF+ N+ + E++ ++TGPNMGGKS +RQ A+ I+AQ+G+FVP + E
Sbjct: 1098 AMLMPNFISNNIYMGCDKEKQSTLLLTGPNMGGKSTLLRQTAISVILAQIGAFVPCTYCE 1157
Query: 832 LHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVA 891
L V+D I+TR+G+SD++ +G+STFL EL + S +L+ T SL I+DELGRGTS+ DG A
Sbjct: 1158 LTVVDKIFTRLGSSDNLFEGKSTFLVELEDISNLLKQSTKYSLAILDELGRGTSSFDGTA 1217
Query: 892 IAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
IA +TL+ + + KC +F THY + + + K ++ YH+S +D + ++
Sbjct: 1218 IALSTLEQISDVIKCRCIFSTHYHLLVE-EVKHNKNISNYHMSL--------SIDDEQEK 1268
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRA---TVIAAKLEAEVSSRVQNRSAKR 1008
+ +LYK + GV SFG +A+LA LP I A +++ + E ++ ++ R
Sbjct: 1269 -IIFLYKFIKGVCPKSFGIHIAKLAGLPKEIIDLAHEKSLLFENVTDEFCKIIKYKNITR 1327
Query: 1009 DLLVKLSDQE 1018
LL + +D++
Sbjct: 1328 SLLNEEADEK 1337
>gi|167824907|ref|ZP_02456378.1| DNA mismatch repair protein [Burkholderia pseudomallei 9]
Length = 893
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 256/926 (27%), Positives = 408/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A A
Sbjct: 23 HTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 82
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 83 GVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 136
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 137 LLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAELA 180
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 181 PDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDIASGTQRL 230
Query: 324 A---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
EV SL + G L++ + G + + A Q L RH++
Sbjct: 231 CDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHVR 273
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+E + S + L +T + LE L G+E TL +++ T G
Sbjct: 274 SLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAMG 320
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLLR W+ HP AR A+ + + + G
Sbjct: 321 SRLLRHWLHHPPRASVAAQARHQAIGALLDR------PPNAG------------------ 356
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L S+ ++L + D++R R+ +A P + ++ L L RE+V
Sbjct: 357 -LDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTF----AALPAL------RERVA 405
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEV 616
++A L RL P G L + E A D G +I+ G +E+
Sbjct: 406 EIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAEL 457
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 458 DELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 517
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + Q LA LD
Sbjct: 518 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAELD 577
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 578 LLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKLL 633
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRST
Sbjct: 634 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRST 692
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF THY
Sbjct: 693 FMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHY 752
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 753 FELTQLPAEFPHAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVAQ 800
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 801 LAGVPAPVIRAARKHLAHLEQQSAAQ 826
>gi|227115140|ref|ZP_03828796.1| DNA mismatch repair protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 840
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 260/934 (27%), Positives = 406/934 (43%), Gaps = 184/934 (19%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTASIPTF 148
QQ LK ++P++LL +G + F +DA+ A+++L I A A +P
Sbjct: 3 QQYFRLKAEHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
+ ++ RLV G V + +Q A GP R + + T T+ +
Sbjct: 63 AVENYLARLVQMGESVAICEQVGDPATSK------GPVERKVVRIVTPGTISDEALLQEK 116
Query: 209 EDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR 268
+D N L + D G GF G ++IS+G E +D R
Sbjct: 117 QD------NLLAAIWQD------------GRGF----GYATLDISSGRFRVSEPDD---R 151
Query: 269 SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMS 328
+ A L +PAELL + E M
Sbjct: 152 ETMAAELQRTNPAELLYPESF-----------------------------------ESMD 176
Query: 329 LYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI--RHLKQFGLER 386
L EN G R + PD A Q L L R L FG+E+
Sbjct: 177 LIEN-----------------RHGLRRRPLWEFE--PDTARQQLNLQFGTRDLTGFGVEQ 217
Query: 387 IM-------CL--------GASFRSLSG-SME-----MTLSANTLQQLEVLRNNSNGSEY 425
CL S + G +ME + + A T + LE+ +N S G E
Sbjct: 218 AKLALRAAGCLLQYAKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQNLSGGVE- 276
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
TL +++ T+T GSR+L+RW+ P D + + R A+S +
Sbjct: 277 NTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQAISAL----------------- 319
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
D+T P L L +G D++R + R+ RTA P + + A
Sbjct: 320 ---QDIT---PD----LQPYLRQVG---DLERILARLALRTARPRDLARMRHA------- 359
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL-- 603
QQ + RE++ L + ++RL+ ++IG+ +L + + + +L
Sbjct: 360 FQQF---PDIREQLAP--LDTDSVRRLV------SLIGQFDELRDLLERAVVEAPPVLVR 408
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELP 661
+ +I+ G +E+ R A + LD L R++LG+ L+ F V G +
Sbjct: 409 DGGVIAPGYHAELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRG 468
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+ VP+++ + + K RY PE+ D++ + + + +A +D + A
Sbjct: 469 QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYDELFDLLLPHLA 528
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E Q + ALA LD L LA + N+V P D +P I I GRHPV++ +L + F+
Sbjct: 529 ELQQSAAALAELDVLTNLAERADTLNYVCPTLSD--KP-GIKITGGRHPVVEQVLREPFI 585
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
N +L +R IITGPNMGGKS Y+RQ ALI +MA +G FVPA A + +D I+TR
Sbjct: 586 SNPLSLAPQRRML-IITGPNMGGKSTYMRQAALIVLMAHIGCFVPADQAVIGPVDRIFTR 644
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA+D + GRSTF+ E+ E + IL N T SLV++DE+GRGTST+DG+++A+A + L
Sbjct: 645 VGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLA 704
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQD-VTYLYKVV 960
K M LF THY ++ + K G V + +D+ D + +++ V
Sbjct: 705 NRIKAMTLFATHYFELTTLPEKMEGVVNVH-------------LDALEHGDTIAFMHSVQ 751
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
G + S+G VA LA +P I RA +LE
Sbjct: 752 DGAASKSYGLAVAALAGVPKEVIKRARQKLKELE 785
>gi|254195822|ref|ZP_04902248.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei S13]
gi|169652567|gb|EDS85260.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei S13]
Length = 895
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 256/926 (27%), Positives = 411/926 (44%), Gaps = 136/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTA 143
+TP+ QQ + +K+++PD L+ +G + F EDAE AA++L + A A
Sbjct: 24 HTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMA 83
Query: 144 SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAE 203
+P + ++ +LV G + +Q A GP R + + T TL A
Sbjct: 84 GVPHHAVEQYLAKLVKFGESAAICEQIGDPATSK------GPVERKVVRVVTPGTLTDAA 137
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+ D +L+ + VG + GV + +G+ + +++G + E
Sbjct: 138 LLSDKSD------VFLLALC-----VGHNKRGVASN-----IGLAWLNLASGALRLAELA 181
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
L + LE + PAE+L + AG + RV D G L
Sbjct: 182 PDQLGAALERI----RPAEILAADGTIESVP------AGMGAITRVPAWHFDTASGTQRL 231
Query: 324 A---EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
EV SL + G L++ + G + + A Q L RH++
Sbjct: 232 CDQLEVASL-DGFGAQALTSA--------------NGAAGALLIYAAATQGQQL--RHVR 274
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+E + S + L +T + LE L G+E TL +++ T G
Sbjct: 275 SLKVE------------NESEYIGLDPSTRRNLE-LTETLRGTESPTLYSLLDTCCTAMG 321
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLLR W+ HP AR A+ + ++ + G
Sbjct: 322 SRLLRHWLHHPPRASVAAQARHQAIGALLDA------PPNAG------------------ 357
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
L S+ ++L + D++R R+ +A P + ++ ++ A L RE+V
Sbjct: 358 -LDSLRSALRQIADVERITGRLALLSARPRD-LSSLRDTFAALPAL---------RERVA 406
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA----DQGDLLNLMIISNGQFSEV 616
++A L RL P G L + E A D G +I+ G +E+
Sbjct: 407 EIASNAAALGRLEAALEPPP--GCLDLLTRAIAAEPAAMVRDGG------VIARGYDAEL 458
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L R + G+ NL E+ V G + KVP ++ +
Sbjct: 459 DELRDISENCGQFLIDLETRERARTGISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQ 518
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ K RY +PE+ T D+ A E RA +D L+ + Q LA LD
Sbjct: 519 TLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHIEGCQRVASGLAELD 578
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYC 794
L A A +R ++V P F D+ + I I GRHPV++ ++ F+ ND L+ ER+
Sbjct: 579 LLAAFAERARTLDWVAPEFTDE---IGIEIDQGRHPVVEA-QVEQFIANDCALNPERKLL 634
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
+ITGPNMGGKS ++RQ ALI +MA VGS+VPA +A +D I+TR+GA+D + GRST
Sbjct: 635 -LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRST 693
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ EA+ IL + T SLV++DE+GRGTST DG+A+A+A +LL H +C LF THY
Sbjct: 694 FMVEMTEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHY 753
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + +F + + + H ++ +L+ V G + S+G +VAQ
Sbjct: 754 FELTQLPAEFPQAANVHLSAVEHGHGIV------------FLHAVEEGPANQSYGLQVAQ 801
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA +P I A A LE + +++
Sbjct: 802 LAGVPAPVIRAARKHLAHLEQQSAAQ 827
>gi|254786792|ref|YP_003074221.1| DNA mismatch repair protein MutS [Teredinibacter turnerae T7901]
gi|259511176|sp|C5BMR5.1|MUTS_TERTT RecName: Full=DNA mismatch repair protein MutS
gi|237683787|gb|ACR11051.1| DNA mismatch repair protein MutS [Teredinibacter turnerae T7901]
Length = 864
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 309/626 (49%), Gaps = 82/626 (13%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
++L A T + LE L N NGSE TL ++N T T G RLLRRW+ PL D + + +R
Sbjct: 272 VSLDAATRRNLE-LDINLNGSEENTLFSVLNTTATAMGGRLLRRWINTPLRDLHTLHSRQ 330
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
A++ + E+ Y V L D++R + RI
Sbjct: 331 SAIAALLEN----------------------------YRFEQVQQELKHIGDLERILGRI 362
Query: 523 FHRTATPSEFIAVMQAI-LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASS--- 578
R+A P + ++ ++ +Y QLQ L L SA + L AS
Sbjct: 363 ALRSARPRDLTRLLNSLAIYP--QLQPL--------------LKSAECETLATLASEINE 406
Query: 579 -PAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMC 637
P ++ + K L +G +I+ G E+ R +A E L L
Sbjct: 407 FPGLVQELDKALVENPPVVIREGG-----VIAEGYDEELDELRGISTNAGEFLVKLETQE 461
Query: 638 RKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLA 695
R++ G+ L+ + V G I K P + + + K R+ +PE+ T D+
Sbjct: 462 RERTGLNTLKVGYNRVHGYFIEISKSQAEKAPAEYIRRQTLKNAERFITPELKTFEDKAL 521
Query: 696 LANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVD 755
A +A ++ +++ + E Q + A+A LD L+ A + V+P F
Sbjct: 522 SAKSRALSREKALYEQLIEKLNEHLRELQISAVAVAELDVLNTFAERAHALKLVKPEFRG 581
Query: 756 DHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALI 815
+ I I GRHPV++ +L D F+PND L+A++ IITGPNMGGKS Y+RQ ALI
Sbjct: 582 E---AGIEIEKGRHPVVEQVLTDPFIPNDLTLNAQQRML-IITGPNMGGKSTYMRQTALI 637
Query: 816 GIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLV 875
++AQVGS+VPA + L ++D I+TR+G+SD + GRSTF+ E+ E + IL N T+ SLV
Sbjct: 638 VLLAQVGSYVPAEACRLGLVDRIFTRIGSSDDLAGGRSTFMVEMTETANILNNATSDSLV 697
Query: 876 IVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSY 935
++DE+GRGTST+DG+++A+A +++L E K LF THY +I + + +V H
Sbjct: 698 LMDEIGRGTSTYDGLSLAWACVEHLAEKLKSFTLFATHYFEITALPAQLP-TVKNVH--- 753
Query: 936 LTSHKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
+D+ QD + +L+ + G + S+G +VA+LA +P + + +A + KLE
Sbjct: 754 ---------LDATEYQDNIVFLHNIQAGPASKSYGLQVAKLAGIPGAVLRQAKDVLHKLE 804
Query: 995 -------AEVSSRVQNRSAKRDLLVK 1013
A V+SR S + D+ +
Sbjct: 805 TGKPESPAPVASRSSKPSMQADMFAE 830
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI--YAHLDHN---FM 141
+++TP+ QQ + +K ++P+ L+ +G + F EDA AAK+L + A N
Sbjct: 13 EQHTPMMQQYLRIKAQHPNELVFYRMGDFYELFYEDARKAAKLLDVTLTARGKSNGEPIP 72
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
A +P ++ +LV G V + +Q A GP R + + T T+
Sbjct: 73 MAGVPYHAAENYLAKLVKLGVSVAICEQIGDPAT------TKGPVERKVMRVVTPGTV 124
>gi|406967699|gb|EKD92716.1| hypothetical protein ACD_28C00354G0004, partial [uncultured
bacterium]
Length = 776
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 210/670 (31%), Positives = 337/670 (50%), Gaps = 114/670 (17%)
Query: 360 GIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNN 419
G+ P +AV A + +L++ ++ L L G M L TL+ LE+L
Sbjct: 130 GLGQWP-IAVNAAGFLVEYLRETQKNGLIHLKRPKPYLPGEF-MLLDEATLRNLELLSTF 187
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
+ + G+LL +++ T T G RLL++W PL ++N I RLDAV + GS
Sbjct: 188 HDHKKEGSLLGVLDRTQTAMGGRLLKQWTVRPLTEKNRIQVRLDAVENFIKE-GS----- 241
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI 539
I ++ +G D++R + R+ TP + +A+ +
Sbjct: 242 ---------------------IFETLWEEMGHILDLERSVARLSLERGTPRDAMALKSS- 279
Query: 540 LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
LQ+L + K+L SAL A LL+ + K+
Sbjct: 280 ------LQRLPL---------VKSLLSAL----------------NAPLLAELQKKLQPL 308
Query: 600 GDLLNLMIISNGQ-----FSEVARARKAVQSAKEELDSLINMCRKQLG-MRNLEFMSV-- 651
DL++L+ S + E R+ EELD L ++ R+ G ++NL+ +
Sbjct: 309 PDLVSLIDASIVEEPPLNLKEGGFIREGFH---EELDELRSLSREGKGFIKNLQQQEIQR 365
Query: 652 SGITHL-----------IEL-PANF-KVPLNWAKVNSTKKTIRYHSPE-------VLTAL 691
+GI+ L IE+ +N VP N+ + + RY +PE VLTA
Sbjct: 366 TGISSLKVKYNRVFGYYIEISKSNLGNVPENYTRKQTLVNAERYITPELKTYEEKVLTAE 425
Query: 692 DQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRP 751
D+ EL R ++ ++ G Q +A+A LD L + +++ +V+P
Sbjct: 426 DKSKALEAEL---FRELRETIMESIG----LIQQNAEAIAELDVLLSFTSVALKNRYVKP 478
Query: 752 VFVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYCQIITGPNMGGKSCYIR 810
DD + I GRHPV++T+ +F+PNDT+ +AE + +ITGPNM GKS ++R
Sbjct: 479 QLRDD---FTLTIQGGRHPVVETMNPSGDFIPNDTHFNAENQQILLITGPNMSGKSTFLR 535
Query: 811 QVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCT 870
QVALI +MAQ+GS+VPA SAE+ V+D I+TR+GASD++ +G+STF+ E+ EA+ IL N T
Sbjct: 536 QVALISLMAQIGSYVPAQSAEIAVVDRIFTRVGASDNLSKGQSTFMVEMQEAANILNNAT 595
Query: 871 AQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGT 930
A+SL+I+DE+GRGTST+DG++IA+A L+YL + LF THY ++ + T
Sbjct: 596 ARSLIILDEIGRGTSTYDGLSIAWAILEYLHQQIGAKTLFATHYHELIAV---------T 646
Query: 931 YHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIA 990
+ ++ V+ D+++ V +L+K+ G + S+G +VA+LA LP + I +A I
Sbjct: 647 ERLERAQNYCVLVHEDTQN--GVVFLHKIQAGGIDKSYGIEVAKLAGLPRAVIEKAQHIL 704
Query: 991 AKLEAEVSSR 1000
LE V +
Sbjct: 705 KDLEEGVVEK 714
>gi|383775107|ref|YP_005454176.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. S23321]
gi|381363234|dbj|BAL80064.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. S23321]
Length = 912
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 264/955 (27%), Positives = 432/955 (45%), Gaps = 179/955 (18%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMT 142
+ TP+ +Q +E+K + +LL +G + F EDAE+A+K LGI H +
Sbjct: 25 RVTPMMEQYLEIKAAHQGLLLFYRMGDFYELFFEDAEIASKTLGIVLTKRGKHQGADIPM 84
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
+P R ++ RL+ AG +V V +QTE A A G RG+ L T TL
Sbjct: 85 CGVPVERSEDYLHRLITAGHRVAVCEQTEDPA-AAKARGNKSVVRRGVVRLVTPGTLT-- 141
Query: 203 EDVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYG 260
ED +NYL+ + + R+ GD R G+ ++IST +
Sbjct: 142 ------EDTLLDARANNYLLAI-------ARARSSAGGD----RFGLAWIDISTAEFTVM 184
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E + G L A L ++P E ++ L E PA V +RD F G
Sbjct: 185 ECSGG----ELAATLARINPNEAIVTDALYSDNELSQTLRELPA----VTPLTRDVFDGA 236
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
A + + + ++G+ + L A A + ++
Sbjct: 237 TAEKRLCDYFAV-----------------------ATMDGLAQLTRLEATAAAAAVTYVD 273
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ + + L R SG+ M + T LE+ R + G G+LL ++ T+T G
Sbjct: 274 RTQVGKHPPLSPPAREASGAT-MAIDPATRANLELTRTLA-GERRGSLLDAIDCTVTSAG 331
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SRLL + + PL D I+ RLDAVS ++S + D
Sbjct: 332 SRLLAQRLAAPLTDAPAIARRLDAVSAF--------VADSAARED--------------- 368
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
+ S+L +PD+ R + R+ P + + I+ A + L +L GE
Sbjct: 369 -IRSILRG---APDMSRALARLSVGRGGPRDLAGLRDGIIAADQVLARL---GELDHP-- 419
Query: 561 SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ-----GDLLNLMIISNGQFSE 615
P IG L ++E A + D L L I +G F
Sbjct: 420 ------------------PQEIGAVMSALQRPSRELASEFASALDDQLPL-IKRDGGF-- 458
Query: 616 VARARKAVQSAKEELDSLINMCR-----------KQLGMRNLEFMSVSGITHLIELPANF 664
R+ + A +E +L + R G++ L+ + + + +E+ A
Sbjct: 459 ---VRQGYEPALDEARNLRDASRLVVASMQARYADNTGVKGLKIRHNNVLGYFVEVTAQH 515
Query: 665 KVPLNWAKVNST---KKT----IRYHSPEVLTALDQLALANE-----ELTIVCRAAWDSF 712
L A +N+T ++T +R+ + E+ ++A A + EL I R + +
Sbjct: 516 GDKLMSAPLNATFIHRQTLAGQVRFTTSELGEIEAKIANAGDRALGLELEIFERLSAKAL 575
Query: 713 LKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVL 772
+ +AA A A LD +LA L+ + N+VRP VD E + I +GRHPV+
Sbjct: 576 -----DISDDLRAAAHAFALLDVATSLARLAVDDNYVRPE-VD--ESLGFAIEAGRHPVV 627
Query: 773 DTILLDN---FVPNDTNLH---AERE-YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
+ L N F+ N +L A++ ++TGPNM GKS ++RQ ALI ++AQ+GSFV
Sbjct: 628 EQALKRNGEPFIANACDLSPGPAQKSGQLWLLTGPNMAGKSTFLRQNALIALLAQIGSFV 687
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PA+ A + ++D +++R+GA+D + +GRSTF+ E+ E + IL ++LVI+DE+GRGT+
Sbjct: 688 PAARARIGIIDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGERALVILDEIGRGTA 747
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTK----FTGSVGTYHVSYLTSHKV 941
T DG++IA+A +++L E +C LF THY ++ + K F +V
Sbjct: 748 TFDGLSIAWAAIEHLHESNRCRTLFATHYHELTALSAKLPRMFNATVRV----------- 796
Query: 942 MGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
+ +V +L++V+PG ++ S+G +VA+LA LPP+ I+RA + AKLEA+
Sbjct: 797 -----KEWQGNVVFLHEVLPGSADRSYGIQVAKLAGLPPAVITRAKSVLAKLEAQ 846
>gi|422320383|ref|ZP_16401444.1| mismatch repair protein [Achromobacter xylosoxidans C54]
gi|317404852|gb|EFV85225.1| mismatch repair protein [Achromobacter xylosoxidans C54]
Length = 884
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 266/938 (28%), Positives = 420/938 (44%), Gaps = 143/938 (15%)
Query: 80 SSQTTHNKKY---TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHL 136
++QTT + + TP+ QQ + LK + +LL +G + F EDAE A++L +
Sbjct: 4 ATQTTAAEAHAGHTPMMQQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERGARLLNLTLTK 63
Query: 137 DHNFMTASIPTFRLNVH-----VRRLVNAGFKVGVVKQT-ETAAIKAHGPGKAGPFGRGL 190
+ IP L VH + RLV G V + +Q + AA K GP R +
Sbjct: 64 RGSSNGTPIPMAGLPVHAMEQYLARLVAMGESVAICEQIGDPAASK-------GPVERRI 116
Query: 191 SALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
+ T TL + D L V V G+ R G+ +
Sbjct: 117 VRIVTPGTLTDDALLPAKAD------RALAAVF------------VTGNARAPRAGLAWL 158
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
+++GD E + LE+ L ++PAE++ + + + G S V
Sbjct: 159 NLASGDFRVTECAP----AQLESELHRIAPAEIVCAD-----SAEFDFPFEGARSRV--- 206
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
F GA A +++ ++ DTL+ + ++M + I + A +
Sbjct: 207 --PDWHFESDGARAHLLAHFKT---DTLAGFDIEDMP--------AGICAAGALLRYAAR 253
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
+ + H++ ER G + L T + LE L +G + TL
Sbjct: 254 TQSQALAHVQSLSAER-----------PGQF-VLLDPVTRRNLE-LTQTLSGEDSPTLFS 300
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEI-AESMGSYRTSESVGQHDEKNS 489
+++ T GSRLLRRW+ HPL D AR A+S + A M +T S G
Sbjct: 301 LLDGCRTPMGSRLLRRWLHHPLRDNAPAQARQQAISTLLAGRMDVEQTFGSAG------- 353
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
+L ++ +L PDI+R R+ R+ P E +A ++ L A L+ L
Sbjct: 354 -----------LLETLRGALNAFPDIERIAARLALRSVRPRE-LASLRDALQALPALRDL 401
Query: 550 HIDGEYREKVTSKTLH-------SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
++ H +ALL R I A+ PAV + +L+T D+
Sbjct: 402 VAPMAASPRLNDLVSHLSVDPALAALLVRAI--AAEPAVAIRDGGVLATGFDAELDE--- 456
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMSVSGITHLIEL 660
L + G F AR+ R++ G+ NL EF V G +
Sbjct: 457 LRALAADGGDFLVQLEARE----------------RERTGISNLRVEFNRVHGFYIEVTK 500
Query: 661 PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW--DSFLKEFGG 718
KVP ++ + + K RY +PE+ T D++ A + + R W + L
Sbjct: 501 GQTAKVPEDYRRRQTLKNAERYITPELKTWEDKVLSAQDR--SLAREKWLFEQLLDVLAE 558
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
+ ALA LD L ALA +R +++ P E I I +GRHPV++ + +
Sbjct: 559 HVRPLSDCAGALAELDTLAALAEHARRHDWIAPEL---SEQADIDIDAGRHPVVEQAI-E 614
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
F PN L R +ITGPNMGGKS Y+RQVALI ++A++GSFVPA+ A + +D I
Sbjct: 615 RFTPNGCRLDPARRML-LITGPNMGGKSTYMRQVALIVLLARIGSFVPAARARIGRIDRI 673
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TR+GA+D + GRSTF+ E+ EA+ IL T SLV++DE+GRGTST+DG+A+A+A
Sbjct: 674 FTRIGAADDLAGGRSTFMMEMTEAAAILAASTPNSLVLMDEIGRGTSTYDGLALAWAIAC 733
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
LL H + + LF THY ++ + + S + + ++S + +L++
Sbjct: 734 RLLAHNRALTLFATHYFELTRLPAEQPASANVHLAA------------AESAGGIVFLHE 781
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
V G + S+G +VAQ A +P + I +AT +LEA+
Sbjct: 782 VREGPASRSYGIQVAQRAGVPAAVIRQATRELERLEAQ 819
>gi|300774609|ref|ZP_07084472.1| DNA mismatch repair protein MutS [Chryseobacterium gleum ATCC 35910]
gi|300506424|gb|EFK37559.1| DNA mismatch repair protein MutS [Chryseobacterium gleum ATCC 35910]
Length = 863
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 247/957 (25%), Positives = 430/957 (44%), Gaps = 155/957 (16%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FMT 142
KK TPL Q +K KYPD LL+ VG + FG+DA +++LGI +N
Sbjct: 5 KKETPLMTQYNTIKGKYPDALLLFRVGDFYETFGQDAVKTSQILGIVLTKRNNGEGSVEL 64
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
A P ++ ++ +LV AG +V + Q E + G RG++ L T
Sbjct: 65 AGFPHHSIDSYLPKLVRAGMRVAICDQLEDPKMVK------GIVKRGVTELVTPGVTFND 118
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ + ++ N+L+ + + + G+ V+ISTG+ + E
Sbjct: 119 QVLNSKKN------NFLLSLHKEKE----------------KYGIALVDISTGEFLVSEG 156
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
N L ++ + P+E++ + ++ + + +++ F
Sbjct: 157 N----LEKLLHIVNTFDPSEIIFQR----------------STQIPEQIKNKNAF----- 191
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
E + N + L+N+ N +G G+ N+P LA+ A +L +
Sbjct: 192 KLEDWAFQYNFAYEKLTNHFKTN---SLKGF------GVENLP-LAITAAGAIFAYLVED 241
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR-NNSNGSEYGTLLHIMNHTLTIYGS 441
++ + + + + TL+ LE++ +N G +LL I++ T T G
Sbjct: 242 THHNLLSHITKLQIIPQEDYLMMDNFTLRNLEIVYPSNPQGK---SLLDIIDKTSTPMGG 298
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
RLLRR + PL + I RL + + E+ Y
Sbjct: 299 RLLRRRIILPLKSVDEIMRRLSLIDFLNEN------------------------DHLKYE 334
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
+ +L S+ D+ R + ++ +P E + Q+++ K LH + +
Sbjct: 335 ICQLLKSIS---DLDRLMGKLAAEKISPKELGYLRQSLINIHKIKSLLHSHADVLAWLEP 391
Query: 562 KTLHSALLKRLI--LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARA 619
L+K L L P I K II G E+ R
Sbjct: 392 LFDLEELIKFLQNHLNEELPVSIAKGN--------------------IIKEGVSEELDRL 431
Query: 620 RKAVQSAKEELDSLINMCRKQL---GMRNL--EFMSVSGITHLIELPANFKVPLNWAKVN 674
R + LD MC++++ G+ +L +F +V G + KVP +W +
Sbjct: 432 RNLQSKGRGFLDE---MCQREIERTGITSLKIDFNNVFGYYIEVRNTHKDKVPDDWVRKQ 488
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ RY + E+ +Q+ A E++ ++ + + + E Y + Q +A LD
Sbjct: 489 TLVNAERYITEELKEYENQILGAEEKIGVLETSLYRNVCGETMVYIDQIQGNSNIIAQLD 548
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAERE 792
L+ L+ ++++ +PV D + I + RHP+++ L + ++PND L + +
Sbjct: 549 VAAGLSELAVSESYTKPVLNDGY---AIDLKEARHPIIENALPLGEKYIPNDIFLDKDSQ 605
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
++TGPNM GKS +RQ A++ ++AQ+GSFVPA AE+ +LD I+TR+GA+D+I G
Sbjct: 606 QIIMVTGPNMAGKSAILRQTAIVCLLAQIGSFVPAKYAEIGMLDKIFTRVGATDNISAGE 665
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLFV 911
STF+ E+NEA+ IL N + +SL+++DE+GRGTST+DGV+IA+A +YL +H + LF
Sbjct: 666 STFMVEMNEAANILNNISERSLILLDEIGRGTSTYDGVSIAWAIAEYLHQHPTQAKTLFA 725
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ ++ F V +HVS ++ ++ +L K+V G SE SFG
Sbjct: 726 THYHELNEMTVNFE-RVKNFHVSI-----------QENKGNIIFLRKLVSGGSEHSFGIH 773
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVS 1028
VA+LA +P ++RA I LEA SR Q + + +++ +ENM +S
Sbjct: 774 VAKLAGMPAKVVNRANEILKTLEA---SRTQGNGGISESIKRVT------EENMQLS 821
>gi|423073923|ref|ZP_17062658.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense DP7]
gi|361855336|gb|EHL07320.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense DP7]
Length = 846
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 314/623 (50%), Gaps = 75/623 (12%)
Query: 403 MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARL 462
M L T + LE+ + + GTLL +++ T T +G RLLRRW+ PL + I RL
Sbjct: 245 MLLDPWTRRNLELTESIRGQGKKGTLLSVLDFTKTAFGGRLLRRWIEQPLLLKGEIEKRL 304
Query: 463 DAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI 522
D V + E ++ ++ G+ D++R + ++
Sbjct: 305 DYVEALVEDS---------------------------FLRGDLIQLFGKVYDLERLMGKV 337
Query: 523 FHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVI 582
+ TA + +++ Q L QL+ L +G K L A PA+
Sbjct: 338 SYGTANARDLLSLAQT-LGVLPQLRALLAEG----------------KSEPLQAFIPALE 380
Query: 583 GK---AAKLLSTVNKEAA---DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
G AA L +N EA G+LL G E+ R K + L +M
Sbjct: 381 GLDPLAATLEQAINPEAPISLKDGNLLK-----AGYSVEIDELRSISSGGKAWVAKLESM 435
Query: 637 CRKQLGMRNLEFMSVSGITHLIELP-ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
+ + G+R+L+ + IE+ AN +P + + + R+ +PE+ ++
Sbjct: 436 EKDRTGIRSLKVGYNKVFGYYIEVTHANSHLIPAEYIRKQTLANAERFITPELKEYEQKI 495
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
A E++T + + + G A+ A ALA +D +LA + ++ RPV
Sbjct: 496 LGAEEKVTQLEYQLFLELRETVRGQAAKILEAAHALAEIDVYTSLAEAAVRHHYSRPVMK 555
Query: 755 DDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
+ + I GRHPV++++L D +FVPNDT L E ++ +ITGPNM GKS Y+RQVA
Sbjct: 556 GEG---GLTIIEGRHPVVESMLQDTSFVPNDTIL-TEDKHLALITGPNMAGKSTYMRQVA 611
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
LI +MAQ+GSFVPA A + + D I+TR+GASD + G+STF+ E+ E ++ILR+ T QS
Sbjct: 612 LIVLMAQIGSFVPAQQATIPIADHIFTRVGASDDLASGQSTFMVEMYEVAHILRHVTPQS 671
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLL-EHKKCMVLFVTHYPKIADIKTKFTGSVGTYH 932
L+I+DE+GRGT+T+DG++IA+A +YL + K LF THY ++ D++ +G + H
Sbjct: 672 LIILDEVGRGTATYDGLSIAWAVAEYLAGQENKPKTLFATHYHELTDLEETHSG-IFNLH 730
Query: 933 VSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAK 992
V + +++ +L+K++PG ++ S+G +VA+LA LP + + RA +I +
Sbjct: 731 VGV-----------REHGEEIVFLHKIIPGRADRSYGIQVAKLAGLPANLLHRAKIILHE 779
Query: 993 LEAEVSSRVQNRSAKRDLLVKLS 1015
LE+ Q ++ +LS
Sbjct: 780 LESSAKESRQEHLFNKEKATQLS 802
Score = 43.5 bits (101), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 94 QQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTASIPTF 148
QQ +K++ PD +L +G + FGEDA AA +L I + +P
Sbjct: 3 QQYKSIKSQAPDAILFFRLGDFYEMFGEDARTAAPILEIALTGRDSGGGERIPMCGVPHH 62
Query: 149 RLNVHVRRLVNAGFKVGVVKQTE 171
++ ++ +LV+AG+KV + +Q E
Sbjct: 63 AVDGYLLKLVSAGYKVALCEQVE 85
>gi|350545598|ref|ZP_08915070.1| DNA mismatch repair protein MutS [Candidatus Burkholderia kirkii
UZHbot1]
gi|350526655|emb|CCD39975.1| DNA mismatch repair protein MutS [Candidatus Burkholderia kirkii
UZHbot1]
Length = 921
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 258/936 (27%), Positives = 406/936 (43%), Gaps = 131/936 (13%)
Query: 67 KLSPHTLNPIPTPSSQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAE 124
K+ HT P TP H ++TP+ QQ + +K ++P L+ +G + F EDAE
Sbjct: 17 KMGNHTATP-DTPGDTAAHADLSQHTPMMQQYLRIKAEHPGTLVFYRMGDFYELFFEDAE 75
Query: 125 MAAKVLGIY-----AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHG 179
AA++L + A + A +P ++ +LV G V + +Q A
Sbjct: 76 KAARLLDLTLTQRGASGGNPIKMAGVPHHACEQYLAKLVKLGESVAICEQIGDPATSK-- 133
Query: 180 PGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGD 239
GP R + + T TL A + D YL+ + G + +
Sbjct: 134 ----GPVERKVVRVVTPGTLTDAALLSEKND------VYLLALCPAHNRRGVVTS----- 178
Query: 240 GFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLA 299
+G+ + +++G + E + + LE + PAE L+ L+ + +
Sbjct: 179 -----VGLAWLNLASGALRLAEVAPARVSAALERI----RPAETLVADSLTDLQASVGVT 229
Query: 300 Y--AGPASNVRVECASRDCFIGGGALAEVMSL--YENMGEDTLSNNEDQNMDVPEQGNHR 355
AG + RV D G L E + + + G TL+
Sbjct: 230 NLGAGHVAITRVPAWHFDVGSGMQRLREQLDVASLDGFGAQTLT---------------- 273
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEV 415
A + A +RH++ +E S + L T + LE
Sbjct: 274 CACGAAGALLLYAAATQGQQLRHVRSLKVE------------YESEYVGLDPATRRNLE- 320
Query: 416 LRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE--SMG 473
L G+E TL +++ T GSRLLR W+ HP D ++ AR A+ + E S G
Sbjct: 321 LTETLRGTESPTLFSLLDTCCTTMGSRLLRHWLHHPPRDASIAQARQQAIGALIEAPSGG 380
Query: 474 SYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFI 533
T +V L + DI+R R+ +A P +
Sbjct: 381 GLDTLRAV---------------------------LRKVSDIERITGRLALLSARPRDLS 413
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVN 593
++ +AG E R V + H+ L+R+ P + LL+ N
Sbjct: 414 SLRDT--FAGLP--------ELRALVAGVSAHALALERITAALEPP---HECLGLLT--N 458
Query: 594 KEAADQGDLL-NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNL--EFMS 650
A + L+ + +I+ G ++ R ++ + L L R + G+ NL E+
Sbjct: 459 AIAPEPAALIRDGGVIARGYDPDLDELRDISENCDQFLIDLEARERARTGIANLRVEYNK 518
Query: 651 VSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
V G + KVP ++ + + K RY +PE+ T ++ A E RA +D
Sbjct: 519 VHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFENKALSAQERALARERALYD 578
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+ L+ + A+ Q LA LD L A A +R ++V P F D I I GRHP
Sbjct: 579 ALLQNLLPFIADCQRVAGVLAELDLLCAFAERARALDWVAPEFTAD---AGIDIEQGRHP 635
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
V++ ++ F+ ND L +R+ +ITGPNMGGKS +RQ ALI +MA VGS+VPA A
Sbjct: 636 VVEA-QVEQFIANDCCLSQDRKLL-LITGPNMGGKSTLMRQTALIALMAYVGSYVPAKCA 693
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
LD I+TR+GA+D + GRSTF+ E+ EA+ IL + +A SLV++DE+GRGTST DG+
Sbjct: 694 RFGALDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDASASSLVLMDEIGRGTSTFDGL 753
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSD 950
A+A+A +LL H C LF THY ++ + +F H+S L + D
Sbjct: 754 ALAWAIARHLLTHNGCYTLFATHYFELTQLPAEFV-QAANVHLSAL-----------EHD 801
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRA 986
+ +L+ V G + S+G +VAQLA +P I A
Sbjct: 802 HGLVFLHAVNEGPANQSYGLQVAQLAGVPAPVIRAA 837
>gi|83589961|ref|YP_429970.1| DNA mismatch repair protein MutS [Moorella thermoacetica ATCC
39073]
gi|123524598|sp|Q2RJG2.1|MUTS_MOOTA RecName: Full=DNA mismatch repair protein MutS
gi|83572875|gb|ABC19427.1| DNA mismatch repair protein MutS [Moorella thermoacetica ATCC
39073]
Length = 863
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 263/925 (28%), Positives = 418/925 (45%), Gaps = 152/925 (16%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTA- 143
+ TP+ Q ++K++YPD +L +G + F EDAE+AA+ L + A
Sbjct: 3 REQALTPMMAQYRQIKSQYPDCILFFRLGDFYEMFYEDAEVAARELDLVLTTRGGKEAAP 62
Query: 144 --SIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATL- 199
+P + ++ RLV G+KV + +Q E P +A G R + + T T+
Sbjct: 63 MCGVPFHAADSYLARLVGKGYKVAICEQMED-------PRQAKGLVRREVIRVVTPGTIT 115
Query: 200 -EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E A GG +NYL +V +G G+ + STG+ +
Sbjct: 116 DEKALTPGG--------NNYLAAIVRYNGC----------------WGLAWADASTGEFL 151
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFI 318
+ D + L L+ L P+E LL L++ T
Sbjct: 152 FTTCPD---QETLVDELVRLMPSEYLLPGELARDT------------------------- 183
Query: 319 GGGALAEVMSLYEN---MGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALT 375
AL ++ +Y G SN E + + H A+ G+ +P A A A+
Sbjct: 184 ---ALKRLLQIYTRGVITGWQVASNPEAARQSLEDHFGH-EALAGV-ELPAAAGLAAAMI 238
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHT 435
+ L + L A + + S M L T + LE++ G+LL +++ T
Sbjct: 239 LSFLVATQHNSLAHLEAPAAAATTS-RMFLDQATRRNLELVTAGREQKREGSLLWVLDKT 297
Query: 436 LTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVE 495
LT G+R LRRW+ D+ L+ A A+ E E++ E E + +V
Sbjct: 298 LTAMGARTLRRWL-----DQPLVDA--GAIKERQEAVAEL--VEGFILRQELRERLQVVR 348
Query: 496 PQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEF------IAVMQAILYAGKQLQQL 549
D++R R+ + TA E +AV+ IL + + ++
Sbjct: 349 ------------------DLERLAGRVAYGTAGGRELQALRGSLAVIPGIL---ELMSEV 387
Query: 550 H--IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMI 607
H + + R ++ LL R L PA I + I
Sbjct: 388 HSRLLAQVRAQLDPLDDLVDLLGR-ALVDDPPASITEGG--------------------I 426
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFK 665
I G EV + R+A ++ + SL R++ G+++L+ + V G + P +
Sbjct: 427 IRTGYNGEVDKLREAATHGRDWIASLEAEERERTGIKSLKVGYNRVFGYYIEVTRPNLPQ 486
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP ++ + + R+ + + Q+ A E L + + +E G QA
Sbjct: 487 VPADYERKQTLANAERFVTRRLQELERQVLGAEERLVQLEYELFQGLREEVLGVLPRIQA 546
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI-LLDNFVPND 784
+AL LD L +LAT++ + N+ P VDD ++I GRHPV++ + FVPND
Sbjct: 547 TARALGVLDALISLATVAVDNNYTCP-RVDDGTVIEIE--QGRHPVVELVGSPGTFVPND 603
Query: 785 TNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGA 844
T L E +Y QIITGPNM GKS YIRQVALI ++AQ+GSFVPA A + ++D I+TR+GA
Sbjct: 604 TYLDQE-QYIQIITGPNMAGKSTYIRQVALIVLLAQIGSFVPARRAHIGLVDRIFTRVGA 662
Query: 845 SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 904
+D I G+STF+ E+ E + IL++ T +SLVI+DE+GRGTST DG++IA A +Y+
Sbjct: 663 ADDIFAGQSTFMVEMQEVAGILKHATRRSLVILDEVGRGTSTADGLSIARAVTEYIHNVI 722
Query: 905 KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVS 964
LF THY ++ + + +G V Y V+ L + +D+T+L +VPG +
Sbjct: 723 GARCLFATHYHELVSLAEELSG-VRNYCVAVL-----------EEGEDITFLRTIVPGST 770
Query: 965 ESSFGFKVAQLAQLPPSCISRATVI 989
+ S+G VA+LA LP + RA I
Sbjct: 771 DKSYGIHVARLAGLPEQVLERAREI 795
>gi|154293501|ref|XP_001547279.1| hypothetical protein BC1G_13901 [Botryotinia fuckeliana B05.10]
Length = 737
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 306/643 (47%), Gaps = 64/643 (9%)
Query: 366 DLAVQALALTIRHLKQFGLERIMCLGASF---RSLSGSMEMTLSANTLQQLEVLRNNSNG 422
DL + A ++LK LE+ + +F + + L TL LE+ N +G
Sbjct: 91 DLLISAFGALFQYLKFLQLEKPLLTQGNFSWYNPIQKGTTLVLDGQTLINLEIFSNTFDG 150
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
+ GTL +++ T +G RL R+WV+HPL D I+ RLDAV
Sbjct: 151 NSDGTLYTLLDRCTTPFGKRLFRQWVSHPLSDIKRINERLDAV----------------- 193
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
D N D + S +S PD++R I+RI + P +F+ V++
Sbjct: 194 --DFLNRDNELSR--------SFKSSTSAMPDLERLISRIHAGSCRPEDFVKVLEGF--- 240
Query: 543 GKQLQQLHID--GEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG 600
+Q++ + D G+Y + + RL+ AS P + + +++ A +
Sbjct: 241 -EQIEYIQKDILGKY-------SSGDGIFNRLV--ASIPDLAEPLQWWKTAFDRKKAKEH 290
Query: 601 DLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL 660
+L + G + ++ ++ +EL SL+ +K+ + +E S+ H +++
Sbjct: 291 KIL---VPERGVEEDFDASQDRIEEINQELASLLKKYQKKFDSKKVELKSIGKEIHQLQV 347
Query: 661 PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
P + KVP +W ++ RY+ PE+ + L E + + F F Y
Sbjct: 348 PVSIKVPKDWKVTSAASGFKRYYFPELTNIIRDLQETQETHGQIVKEVASRFYARFDEDY 407
Query: 721 AEFQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
+ AV+ +A LDCL +LA S RP FVD V + RHP + + D
Sbjct: 408 KTWLQAVKVVAQLDCLVSLAAASSALGTTSCRPKFVDSERSV-VEFEELRHPCVLPNVTD 466
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
F+PND L + ++TG N GKS +R + IMAQ+G +VPA SA L +D I
Sbjct: 467 -FIPNDVQLGGQSPNINLLTGANAAGKSTILRMTCVAVIMAQLGCYVPAKSATLTPVDRI 525
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+R+GA+D+I +STF EL+E IL T +SLVI+DELGRGTS++DGV++A A L
Sbjct: 526 MSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVSVAQAVLH 585
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
++ H C+ F THY +A +F H + + +D++S + V +LYK
Sbjct: 586 HVASHIGCIGFFATHYHSLA---LEFDS-----HPEVINKRMAI-EVDNES-RSVLFLYK 635
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
+ GV+E SFG A + +P + RA V A E E +SR+
Sbjct: 636 LENGVAEGSFGMHCASMCGIPRKVVDRAEVAAR--EWEFTSRL 676
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,214,331,717
Number of Sequences: 23463169
Number of extensions: 693051620
Number of successful extensions: 2423058
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9029
Number of HSP's successfully gapped in prelim test: 1718
Number of HSP's that attempted gapping in prelim test: 2377130
Number of HSP's gapped (non-prelim): 25736
length of query: 1083
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 930
effective length of database: 8,769,330,510
effective search space: 8155477374300
effective search space used: 8155477374300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)