BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001405
(1083 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65607|MSH3_ARATH DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana GN=MSH3 PE=1
SV=2
Length = 1081
Score = 1395 bits (3611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/1110 (64%), Positives = 851/1110 (76%), Gaps = 61/1110 (5%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPP 60
MGKQKQQ ISRFFAPK T +P TPPPKI+ATVSFSP+KRK++S
Sbjct: 1 MGKQKQQTISRFFAPKPKSPT---HEPNPVAESSTPPPKISATVSFSPSKRKLLSDHLAA 57
Query: 61 KTPKKPKLSPHTLNPIPTPS------------------SQTTHNKKYTPLEQQVVELKTK 102
+PKKPKLSPHT NP+P P+ +T+ ++KYTPLEQQVVELK+K
Sbjct: 58 ASPKKPKLSPHTQNPVPDPNLHQRFLQRFLEPSPEEYVPETSSSRKYTPLEQQVVELKSK 117
Query: 103 YPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGF 162
YPDV+LM+EVGY++RFFGEDAE+AA+VLGIYAH+DHNFMTAS+PTFRLN HVRRLVNAG+
Sbjct: 118 YPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNFHVRRLVNAGY 177
Query: 163 KVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCG---GESNYL 219
K+GVVKQTETAAIK+HG + GPF RGLSALYTKATLEAAED+ GG G +SN+L
Sbjct: 178 KIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDISGGCGGEEGFGSQSNFL 237
Query: 220 VCVVDDDGNVGKIRNGVFGDG----FDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVL 275
VCVVD+ ++++ G G FDVR+GVV VEISTG+VVY EFND F+RSGLEAV+
Sbjct: 238 VCVVDE-----RVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFNDNFMRSGLEAVI 292
Query: 276 LSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGE 335
LSLSPAELLLGQPLS+QTEK L+A+AGP SNVRVE AS DCF G A+ EV+SL E +
Sbjct: 293 LSLSPAELLLGQPLSQQTEKFLVAHAGPTSNVRVERASLDCFSNGNAVDEVISLCEKISA 352
Query: 336 DTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFR 395
L ++++ ++ E+G + IMNMP L VQALALT HLKQFG ERI+ GASFR
Sbjct: 353 GNLEDDKEMKLEAAEKGMSCLTVHTIMNMPHLTVQALALTFCHLKQFGFERILYQGASFR 412
Query: 396 SLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDR 455
SLS + EMTLSANTLQQLEV++NNS+GSE G+L H MNHTLT+YGSRLLR WVTHPLCDR
Sbjct: 413 SLSSNTEMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDR 472
Query: 456 NLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDI 515
NLISARLDAVSEI+ MGS+ +S+ + E+ S+ IV P+FY +LSSVLT++ RS DI
Sbjct: 473 NLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDI 532
Query: 516 QRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHI--DGEYREKVTSKTLHSALLKRLI 573
QRGITRIFHRTA +EFIAVM+AIL AGKQ+Q+L I D E R + S T+ S LL++LI
Sbjct: 533 QRGITRIFHRTAKATEFIAVMEAILLAGKQIQRLGIKQDSEMR-SMQSATVRSTLLRKLI 591
Query: 574 LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSL 633
SSP V+ A KLLS +NKEAA +GDLL+++I S+ QF E+A AR+AV +E+LDS
Sbjct: 592 SVISSPVVVDNAGKLLSALNKEAAVRGDLLDILITSSDQFPELAEARQAVLVIREKLDSS 651
Query: 634 INMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQ 693
I RK+L +RNLEF+ VSGITHLIELP + KVP+NW KVNSTKKTIRYH PE++ LD+
Sbjct: 652 IASFRKKLAIRNLEFLQVSGITHLIELPVDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDE 711
Query: 694 LALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVF 753
LALA E L IV RA+WDSFLK F YY +F+AAVQALAALDCLH+L+TLSRNKN+VRP F
Sbjct: 712 LALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSRNKNYVRPEF 771
Query: 754 VDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVA 813
VDD EPV+I+I SGRHPVL+TIL DNFVPNDT LHAE EYCQIITGPNMGGKSCYIRQVA
Sbjct: 772 VDDCEPVEINIQSGRHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVA 831
Query: 814 LIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQS 873
LI IMAQVGSFVPAS A+LHVLDG++TRMGASDSIQ GRSTFLEEL+EAS+I+R C+++S
Sbjct: 832 LISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRS 891
Query: 874 LVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHV 933
LVI+DELGRGTSTHDGVAIAYATL +LL K+C+VLFVTHYP+IA+I F GSVGTYHV
Sbjct: 892 LVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHV 951
Query: 934 SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
SYLT K G D DVTYLYK+V G+ SFGFKVAQLAQ+PPSCI RA +AAKL
Sbjct: 952 SYLTLQKDKGSYD---HDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKL 1008
Query: 994 EAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRVEASEDLISAYRDLFLN 1053
EAEV +R +N E E E +E+ ISA DLF +
Sbjct: 1009 EAEVRARERNTRMG----------EPEGHEE------------PRGAEESISALGDLFAD 1046
Query: 1054 LKFATHDDNPAKSFQFLKHARSIAKELIIR 1083
LKFA +++P K+F+FLKHA IA ++ ++
Sbjct: 1047 LKFALSEEDPWKAFEFLKHAWKIAGKIRLK 1076
>sp|P20585|MSH3_HUMAN DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4
Length = 1137
Score = 628 bits (1620), Expect = e-179, Method: Compositional matrix adjust.
Identities = 371/983 (37%), Positives = 556/983 (56%), Gaps = 89/983 (9%)
Query: 44 VSFSPAKRKVV---SSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELK 100
VS +KR++ ++LF S L + S+ YTPLE Q +E+K
Sbjct: 181 VSSEDSKRQINQKDTTLFDLSQFGSSNTSHENLQKTASKSANKRSKSIYTPLELQYIEMK 240
Query: 101 TKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNA 160
++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT RL VHVRRLV
Sbjct: 241 QQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAK 300
Query: 161 GFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG----------GED 210
G+KVGVVKQTETAA+KA G ++ F R L+ALYTK+TL EDV E
Sbjct: 301 GYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTL-IGEDVNPLIKLDDAVNVDEI 359
Query: 211 GCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSG 270
++YL+C+ ++ NV + G ++ +G+V V+ +TG+VV+ F D RS
Sbjct: 360 MTDTSTSYLLCISENKENVRDKKKG------NIFIGIVGVQPATGEVVFDSFQDSASRSE 413
Query: 271 LEAVLLSLSPAELLLGQPLSKQTEKML---LAYAGPASNVRVECASRDCFIGGGALAEVM 327
LE + SL P ELLL LS+QTE ++ + + +RVE F A V
Sbjct: 414 LETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYFEYSHAFQAVT 473
Query: 328 SLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERI 387
Y +DT+ Q I GI+N+ + +LA I++LK+F LE++
Sbjct: 474 EFY---AKDTVDIKGSQ------------IISGIVNLEKPVICSLAAIIKYLKEFNLEKM 518
Query: 388 MCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRR 446
+ +F+ LS ME MT++ TL+ LE+L+N ++ G+LL +++HT T +G R L++
Sbjct: 519 LSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKK 578
Query: 447 WVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVL 506
WVT PL I+ARLDAVSE+ S S + +
Sbjct: 579 WVTQPLLKLREINARLDAVSEVLHSESS--------------------------VFGQIE 612
Query: 507 TSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLH- 565
L + PDI+RG+ I+H+ + EF +++ LY H+ E++ + + H
Sbjct: 613 NHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT-LY--------HLKSEFQAIIPAVNSHI 663
Query: 566 -SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQ 624
S LL+ +IL P ++ L +N++AA GD L F + + + +Q
Sbjct: 664 QSDLLRTVILEI--PELLSPVEHYLKILNEQAAKVGDKTELFK-DLSDFPLIKKRKDEIQ 720
Query: 625 SAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRY 682
+E+ + RK L + ++++VSG +IE+ A +P +W KV STK R+
Sbjct: 721 GVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRF 780
Query: 683 HSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATL 742
HSP ++ L E+L + C A W FL++F +Y AV LA +DC+ +LA +
Sbjct: 781 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKV 840
Query: 743 SRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHAEREYCQIITGP 800
++ ++ RP E +I I +GRHPV+D +L D +VPN+T+L + E IITGP
Sbjct: 841 AKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGP 897
Query: 801 NMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELN 860
NMGGKS YI+QVALI IMAQ+GS+VPA A + ++DGI+TRMGA+D+I +G+STF+EEL
Sbjct: 898 NMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEELT 957
Query: 861 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 920
+ + I+R T+QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + LFVTHYP + ++
Sbjct: 958 DTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCEL 1017
Query: 921 KTKFTGSVGTYHVSYLTS--HKVMGPMDSKSDQD-VTYLYKVVPGVSESSFGFKVAQLAQ 977
+ ++ VG YH+ +L S + P ++ D VT+LY++ G++ S+G VA+LA
Sbjct: 1018 EKNYSHQVGNYHMGFLVSEDESKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLAD 1077
Query: 978 LPPSCISRATVIAAKLEAEVSSR 1000
+P + +A + +LE ++++
Sbjct: 1078 VPGEILKKAAHKSKELEGLINTK 1100
>sp|P13705|MSH3_MOUSE DNA mismatch repair protein Msh3 OS=Mus musculus GN=Msh3 PE=2 SV=3
Length = 1091
Score = 615 bits (1587), Expect = e-175, Method: Compositional matrix adjust.
Identities = 365/947 (38%), Positives = 535/947 (56%), Gaps = 90/947 (9%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE Q +++K ++ D +L +E GYK+RFFGEDAE+AA+ L IY HLDHNFMTASIPT
Sbjct: 187 YTPLELQYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGG- 207
RL VHVRRLV G+KVGVVKQTETAA+KA G K+ F R L+ALYTK+TL EDV
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTL-IGEDVNPL 305
Query: 208 ---------GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E +NYL+C+ ++ N+ + G ++ +GVV V+ +TG+VV
Sbjct: 306 IRLDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKG------NLSVGVVGVQPATGEVV 359
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS----NVRVECASR 314
+ F D R LE + SL P ELLL LS+ TE ML+ A S +RVE +
Sbjct: 360 FDCFQDSASRLELETRISSLQPVELLLPSDLSEPTE-MLIQRATNVSVRDDRIRVERMNN 418
Query: 315 DCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALAL 374
F A V Y D+ QG+ ++ G++N+ + ALA
Sbjct: 419 TYFEYSHAFQTVTEFYAREIVDS-------------QGSQ--SLSGVINLEKPVICALAA 463
Query: 375 TIRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSNGSEYGTLLHIMN 433
IR+LK+F LE+++ SF+ LS ME M ++ TL+ LE+++N ++ G+LL +++
Sbjct: 464 VIRYLKEFNLEKMLSKPESFKQLSSGMEFMRINGTTLRNLEMVQNQTDMKTKGSLLWVLD 523
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G R L+ WVT PL I+ARLDAVS++ S S
Sbjct: 524 HTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESS------------------- 564
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDG 553
+ + L + PD++RG+ I+H+ + EF +++++ +LQ L
Sbjct: 565 -------VFEQIENLLRKLPDVERGLCSIYHKKCSTQEFFLIVKSLCQLKSELQALM--- 614
Query: 554 EYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQF 613
+ + S LL+ LI+ SP L +N AA GD L F
Sbjct: 615 ----PAVNSHVQSDLLRALIVELLSPV-----EHYLKVLNGPAAKVGDKTELFK-DLSDF 664
Query: 614 SEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP--ANFKVPLNWA 671
+ + + +Q + + RK L + +L++++VSG +IE+ A +P +W
Sbjct: 665 PLIKKRKNEIQEVIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWV 724
Query: 672 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 731
KV STK R+H P ++ + +L E+L + C A W FL+ FG +Y AV LA
Sbjct: 725 KVGSTKAVSRFHPPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLA 784
Query: 732 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL--LDNFVPNDTNLHA 789
+DC+ +LA +++ N+ RP E +I I +GRHP++D +L D FVPN T+L +
Sbjct: 785 TVDCIFSLAKVAKQGNYCRPTL---QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSL-S 840
Query: 790 EREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQ 849
+ E IITGPNMGGKS YI+QV L+ IMAQ+GS+VPA A + ++DGI+TRMGA+D+I
Sbjct: 841 DSERVMIITGPNMGGKSSYIKQVTLVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIY 900
Query: 850 QGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVL 909
+GRSTF+E+L + + I+R + QSLVI+DELGRGTSTHDG+AIAYATL+Y + K + L
Sbjct: 901 KGRSTFMEQLTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTL 960
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLT----SHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
FVTHYP + +++ + VG YH+ +L S + G M+ D VT+LY++ G++
Sbjct: 961 FVTHYPPVCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPD-SVTFLYQITRGIAA 1019
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLV 1012
S+G VA+LA +P + +A + +LE VS R + DL +
Sbjct: 1020 RSYGLNVAKLADVPREVLQKAAHKSKELEGLVSLRRKRLECFTDLWM 1066
>sp|A2R1F6|MSH3_ASPNC DNA mismatch repair protein msh3 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=msh3 PE=3 SV=2
Length = 1119
Score = 573 bits (1477), Expect = e-162, Method: Compositional matrix adjust.
Identities = 336/943 (35%), Positives = 534/943 (56%), Gaps = 91/943 (9%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------- 133
K TP+E+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L I
Sbjct: 206 KLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEHPSE 265
Query: 134 -AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
+HLD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+
Sbjct: 266 ASHLD-RFASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAALKAAGDNRNAPFVRKLTN 324
Query: 193 LYTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGV 247
LYTK T ++ AE +GG G + YL+C+ + + +G+ V++G+
Sbjct: 325 LYTKGTYIDDAEGLGGPMPAASGGASPATGYLLCITETNAKG-------WGNDEKVQVGI 377
Query: 248 VAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV 307
VAV+ +TGD+VY +F DGF+RS +E LL ++P ELL+ LSK TEK++ +G NV
Sbjct: 378 VAVQPATGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGELSKATEKLVQHLSGSKLNV 437
Query: 308 -----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIM 362
RVE + + + V S Y + + ++ Q + ++ ++
Sbjct: 438 FGDKTRVERVLKSKTAAAESHSHVSSFYAGKMKTASAADDAQASSL---------LQKVL 488
Query: 363 NMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNG 422
N+P+ L+ I H+K++GLE + L F+ S M L+ NTL LE+ +N ++
Sbjct: 489 NLPEQVTICLSSMIEHMKEYGLEYVFELTKYFQHFSSRSHMLLNGNTLMSLEIYQNQTDH 548
Query: 423 SEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVG 482
+ G+L ++ T T +G R+LR+WV PL D++ + R++AV E+
Sbjct: 549 TTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEEL-------------- 594
Query: 483 QHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYA 542
KN + T++ + +L V + D+++ + RI++ T E + V+Q +
Sbjct: 595 ----KNPEKTVMVERLKGLLGKVKS------DLEKSLIRIYYGKCTRPELLTVLQTMQMI 644
Query: 543 GKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDL 602
++ + + S ++ A+ P ++ L +N AA D
Sbjct: 645 AQEFSDVKSPADT--GFASTAINEAI-------TCLPTILEDVVAFLDKINMHAAKSDDK 695
Query: 603 LNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-- 660
+ + +++ + + S + EL+ ++ ++LG + +E+ SV+GI +LIE+
Sbjct: 696 YAFFREAE-ETEDISDQKLGIASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVEN 754
Query: 661 -PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGG 718
A+ K VP +W KV+ TKK R+H+PEV+ + Q E L C A+ S L +
Sbjct: 755 SSASIKRVPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIAT 814
Query: 719 YYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD 778
Y F+ +VQALA LDCL ALAT++ +V+P + D H +Q+ GRHP+++ +LLD
Sbjct: 815 KYQPFRDSVQALATLDCLIALATIASQPGYVKPEYTD-HTCIQVD--QGRHPMVEQLLLD 871
Query: 779 NFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
++VPND +L +++ ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA+L +LD +
Sbjct: 872 SYVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLDAV 931
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
+TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LD
Sbjct: 932 FTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLD 991
Query: 899 YLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLY 957
Y++ + + LF+THY ++ + F + H+ + S + +D+++T+LY
Sbjct: 992 YMVRSIRSLTLFITHYQHLSSMVHSFADQELRNVHMRFTES-------GTGTDEEITFLY 1044
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+V GV+ S+G VA+LA LP + + +A + +LE ++ R
Sbjct: 1045 EVGEGVAHRSYGLNVARLANLPGALLDQARQKSKELEEKIRRR 1087
>sp|Q2UT70|MSH3_ASPOR DNA mismatch repair protein msh3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=msh3 PE=3 SV=1
Length = 1111
Score = 571 bits (1471), Expect = e-161, Method: Compositional matrix adjust.
Identities = 343/951 (36%), Positives = 532/951 (55%), Gaps = 106/951 (11%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY------------- 133
+K TP+E+QV+++K K+ D +L++EVGYKFRFFGEDA AAK L I
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 134 -AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSA 192
AHLD F +ASIP RL+VHV+RLV+AG KVGVV+Q ETAA+KA G + PFGR L+
Sbjct: 256 EAHLD-RFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAALKAAGDNRNAPFGRKLTN 314
Query: 193 LYTKATLEAAEDVGGGE--------DGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR 244
LYTK T +D+ G E G + Y++C+ + + +G+ V
Sbjct: 315 LYTKGTY--IDDMEGLEGSTASMSATGTSMATGYMLCITETN-------TKGWGNDEKVL 365
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA 304
+G+VAV+ +TGD+VY EF DGF+RS +E LL L+P E+L+ LSK TEK++ +G
Sbjct: 366 VGIVAVQPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGDLSKATEKLVQHLSGNK 425
Query: 305 SN-----VRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIE 359
+N +RVE A + + + V S Y + + N+ Q S ++
Sbjct: 426 TNAFGDEIRVERAPKAKTAAAESHSHVSSFYAERMKKVNATNDVQA---------SSLLQ 476
Query: 360 GIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNN 419
++N+ + A L+ I+H+ ++GLE + L F+ S M L+ANTL LE+ N
Sbjct: 477 KVLNLSEQATICLSSMIKHMSEYGLEHVFQLTKYFQHFSSRSHMLLNANTLNSLEIYHNQ 536
Query: 420 SNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSE 479
++ S G+L ++ T T +G R+LR+WV PL ++ + R+DAV E+
Sbjct: 537 TDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEEL----------- 585
Query: 480 SVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAV---- 535
KN + + Q +L + T D+++ + R+++ T E + +
Sbjct: 586 -------KNLERVALVEQMKCLLGRIKT------DLEKSLIRVYYGKCTRPELLTLLQTL 632
Query: 536 -MQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK 594
M A +AG Q D + + SK + AS P ++ + L +N
Sbjct: 633 QMIAQEFAGVQSPA---DTGFSSPLISKAV-----------ASLPTILEDVVRFLDKINM 678
Query: 595 EAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGI 654
AA D S + E+ + + + + +L+ + + LG R +++++V+GI
Sbjct: 679 HAAKNDDKYEFFRESE-ETDEITEHKLGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGI 737
Query: 655 THLIEL----PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+LI + P+ KVP +W K++ TK R+H+PEV+ L Q E L C A+
Sbjct: 738 EYLIAVENKSPSIKKVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYA 797
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
+FL E Y F+ +VQ+LA LDCL +LAT++ +V+P + + H +Q+ GRHP
Sbjct: 798 TFLAEISASYQSFRDSVQSLATLDCLISLATIANQPGYVKPEYTN-HTCIQVD--QGRHP 854
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++ +LLD++VPND +L +++ ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA SA
Sbjct: 855 MVEQLLLDSYVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPARSA 914
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
+L +LD ++TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGV
Sbjct: 915 KLGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGV 974
Query: 891 AIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKS 949
AIA A LDY++ + + LF+THY ++ + F + H+ + S GP +
Sbjct: 975 AIAQAVLDYMIRSIRSLTLFITHYQHLSSMVHSFPDHELRNVHMRFTES----GP----T 1026
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
++++T+LY+V GV+ S+G VA+LA LP I A +A+LE ++ R
Sbjct: 1027 EEEITFLYEVREGVAHRSYGLNVARLANLPAPLIELAKQKSAELEQKIHRR 1077
>sp|Q5B6T1|MSH3_EMENI DNA mismatch repair protein msh3 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=msh3
PE=3 SV=2
Length = 1105
Score = 570 bits (1469), Expect = e-161, Method: Compositional matrix adjust.
Identities = 337/940 (35%), Positives = 526/940 (55%), Gaps = 92/940 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E+QV+E+K K+ D +L+IEVGYKFRFFGEDA +AAK L I AH
Sbjct: 196 TPMEKQVIEIKKKHMDTILLIEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEHPSEAH 255
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA G + PF R L+ +YT
Sbjct: 256 LD-RFASASIPVQRLHVHVKRLVAAGHKVGVVRQLETAALKAAGDNRNAPFVRKLTNVYT 314
Query: 196 KAT-LEAAEDVGGGEDGCGGES--NYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
K+T ++ E + G G G S Y++C+ + + +G+ V +G+VAV+
Sbjct: 315 KSTYIDDIESLEGSTAGASGASATGYILCITETNARG-------WGNDEKVHVGIVAVQP 367
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV----- 307
+TGD+VY EF+DGF+RS +E LL ++P E+L+ LSK TEK++ +G NV
Sbjct: 368 TTGDIVYDEFDDGFMRSEIETRLLHIAPCEMLIVGELSKATEKLVQHLSGSKMNVFGDKV 427
Query: 308 RVECASRDCFIGGGALAEVMSLY-ENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
RVE A + + + V S Y E M ++ D + + ++ ++ +PD
Sbjct: 428 RVERAPKAKTAAAESHSHVSSFYAEKM----------KSADAADDEVASNLLQKVLGLPD 477
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
L+ I+H+ ++GLE ++ L F+ S M L+ NTL LE+ +N ++ S G
Sbjct: 478 QVTICLSAMIKHMTEYGLEHVLQLTKYFQHFSSRSHMLLNGNTLTSLEIYQNQTDYSSKG 537
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L ++ T T +G R+LR+WV PL DR + R++AV E+ + +R
Sbjct: 538 SLFWTLDRTQTRFGQRMLRKWVGRPLLDRRQLEDRVNAVEELKD----FR---------- 583
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGR-SPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQ 545
+V +VE + LG+ D+++G+ RI++ + E + ++Q + ++
Sbjct: 584 ---NVVMVE--------RIKGLLGKIKHDLEKGLIRIYYGKCSRPELLTILQTMQMIAQE 632
Query: 546 LQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
+ E S + + I+ S P ++ L+ +N AA D
Sbjct: 633 FADI-------ESPADTGFSSPAISQAIM--SLPTILKDVVFFLNKINMHAARNDDKYEF 683
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL----P 661
+ + + + EL+ + + LG + + ++SV+GI +L+E+ P
Sbjct: 684 FREEEETEEISEH-KLGIGAVEHELEEHRPVAGEALGKKMVTYVSVAGIDYLVEVENNSP 742
Query: 662 ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
A +VP +W K++ TKK R+H+PEV+ + Q E L C A+ + E Y
Sbjct: 743 AIKRVPASWMKISGTKKVSRFHTPEVVKMIRQRDQHREALAAACDKAFLALQAEIATNYQ 802
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
+ VQ+LA LDCL +LATL+ +V+P + E IH+ GRHP+++ +LLD++V
Sbjct: 803 ALRDCVQSLATLDCLVSLATLASQPGYVKPEYT---EETCIHVEQGRHPMVEQLLLDSYV 859
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND NL + + ++TGPNMGGKS Y+RQVALI IM Q+GS+VPA +A+L +LD ++TR
Sbjct: 860 PNDINLDSSKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQAAKLGMLDAVFTR 919
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
MGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY++
Sbjct: 920 MGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMV 979
Query: 902 EHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
+ + LF+THY ++ + F G + H+ + S + +D+D+T+LY++
Sbjct: 980 RSIRSLTLFITHYQHLSAMVHSFPDGELRNVHMRFSES-------GTGADEDITFLYEIG 1032
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA LP + A +A+LE ++ R
Sbjct: 1033 EGVAHRSYGLNVARLANLPAPLLEMAKQKSAELEEKIRRR 1072
>sp|A6R7S1|MSH3_AJECN DNA mismatch repair protein MSH3 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=MSH3 PE=3 SV=2
Length = 1166
Score = 566 bits (1458), Expect = e-160, Method: Compositional matrix adjust.
Identities = 337/956 (35%), Positives = 525/956 (54%), Gaps = 92/956 (9%)
Query: 75 PIPTPS--SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI 132
P+P + T K TP+E+Q++++K K+ D LL++EVGYKFRFFGEDA +AAK L I
Sbjct: 236 PVPQKGRGGKKTTTGKLTPMERQIIDIKKKHMDTLLVVEVGYKFRFFGEDARVAAKELSI 295
Query: 133 Y--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAH 178
AHL F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA
Sbjct: 296 VCIPGKLRFDEHPSEAHLSR-FASASIPVHRLHVHVKRLVEAGYKVGVVRQLETAALKAA 354
Query: 179 GPGKAGPFGRGLSALYTKAT----LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRN 234
G + PF R L+ LYTK T +E E+ G + YL+C+ + +
Sbjct: 355 GENRNAPFVRKLTNLYTKGTYIDDVEGLEESSGNSGSASTSTGYLLCMAESNAKG----- 409
Query: 235 GVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTE 294
+G+ V +G+VAV+ +TGDV+Y +F DGF+RS +E LL ++P E L+ +SK TE
Sbjct: 410 --WGNDEKVHVGIVAVQPATGDVIYDDFEDGFMRSEIEMRLLHIAPCEFLIVGEMSKATE 467
Query: 295 KMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVP 349
K++ +G +NV RVE S+ + + V S Y N + DV
Sbjct: 468 KLVQHLSGSKTNVFGDKIRVERVSKSKTAAAESHSHVSSFYAGR-----MNAKGTTGDVA 522
Query: 350 EQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANT 409
+ +E ++ +P+ L+ I+H+ +FGLE + L F+ S M L+ NT
Sbjct: 523 AS----NLLEKVLTLPEDVTICLSSMIKHMSEFGLEYVFDLTKYFQPFSARSHMLLNGNT 578
Query: 410 LQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIA 469
L LE+ +N ++ + G+L ++ T T +G RLLR+WV PL D+ + R+ AV E+
Sbjct: 579 LTNLEIYQNQTDHTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKTELEERVSAVEEL- 637
Query: 470 ESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATP 529
++ T+ + +LS + D+++ + RI++ T
Sbjct: 638 -----------------QDPSKTVQIERLKGLLSKI------RADLEKSLIRIYYGRCTR 674
Query: 530 SEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLL 589
E + V+Q + + +H+ +S T+ +A+ A+ PA+ L
Sbjct: 675 PELLTVLQTLQLIADEY--VHLKSPADLGFSSPTITTAI-------AALPAIRDDVVTYL 725
Query: 590 STVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM 649
+ +N+EAA + D + E+ + + + L + + LG + +++
Sbjct: 726 NKINEEAAKKDDKY-CFFREVEETDEITESNLGIADVQHRLQEHCAVAAEILGKKKVQYT 784
Query: 650 SVSGITHLIEL---PANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVC 705
+V+GI +LIE+ P N K VP +W K++ TKK R+H+PEV+ + + E L C
Sbjct: 785 TVAGIEYLIEVENSPYNLKKVPASWRKISGTKKVSRFHTPEVVQYMRERDQYKEALAAAC 844
Query: 706 RAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHIC 765
A+ + L + Y F+ + ALA LDCL +LA ++ +++P + D +I +
Sbjct: 845 DKAFHALLADISTKYQSFRDCILALATLDCLLSLANIASQPGYIKPAYTD---KTRISVQ 901
Query: 766 SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFV 825
GRHP+++ +LLD +VPND LH + ++TGPNMGGKS Y+RQVALI IM Q+GS+V
Sbjct: 902 RGRHPMVEQLLLDTYVPNDIELHTDETRALLVTGPNMGGKSSYVRQVALISIMGQIGSYV 961
Query: 826 PASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTS 885
PA SA L +LD +YTRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTS
Sbjct: 962 PADSATLGMLDAVYTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTS 1021
Query: 886 THDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGP 944
THDGVAIA A LDY++ + + + LF+THY ++ + +F G + H+ + S
Sbjct: 1022 THDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPKGELRNVHMKFTES-----G 1076
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
MD QD+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1077 MDG---QDITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELEEKIRKK 1129
>sp|A1DCB2|MSH3_NEOFI DNA mismatch repair protein msh3 OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=msh3 PE=3
SV=1
Length = 1117
Score = 562 bits (1449), Expect = e-159, Method: Compositional matrix adjust.
Identities = 343/923 (37%), Positives = 523/923 (56%), Gaps = 98/923 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TPLE+QV+E+K K+ D +L+IEVGYKFRFFGEDA +AAK L I AH
Sbjct: 205 TPLEKQVIEIKRKHMDTVLVIEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEHPSEAH 264
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL+VHV+RLV+AG+KVGVV+Q ETAA+KA G + PF R L+ LYT
Sbjct: 265 LDR-FASASIPVHRLHVHVKRLVSAGYKVGVVRQLETAALKAVGDNRNAPFSRKLTNLYT 323
Query: 196 KAT-LEAAEDVGGGEDGCGG----ESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
K T ++ E + G G + Y++C+ + + +G+ V +G+VAV
Sbjct: 324 KGTYVDDVEGLDGATPAASGGASPATGYMLCITETNAKG-------WGNDEKVHVGIVAV 376
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN---- 306
+ +TGD++Y +F DGF+RS +EA LL ++P EL++ LSK TEK++ +G N
Sbjct: 377 QPNTGDIIYDDFEDGFMRSEVEARLLHIAPCELVIVGELSKATEKLVQHLSGSKLNTFGD 436
Query: 307 -VRVECASRDCFIGGGALAEVMSLYENMGEDTL--SNNEDQNMDVPEQGNHRSAIEGIMN 363
VRV+ ++ A+AE S N L +N D D P + ++ ++N
Sbjct: 437 KVRVDRVAKK----KTAVAESHSHVANFYAAKLKAANTAD---DAPAS----NLLQKVLN 485
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I HL ++GLE I L F+ S M L+ANTL LE+ +N ++ S
Sbjct: 486 LPEQVTVCLSAMIEHLTEYGLEHIFELTKYFQHFSSRSHMLLNANTLVSLEIYQNQTDHS 545
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L ++ T T +G RLLR+WV PL D+ + R++AV E+
Sbjct: 546 AKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKERLEERVNAVEEL--------------- 590
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
K+ D T+ + +L + + D+++ + RI++ T E + V+Q +
Sbjct: 591 ---KSPDRTVQVERLKILLGRIKS------DLEKNLIRIYYGKCTRPELLTVLQTL---- 637
Query: 544 KQLQQLHIDGEYREK--VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
+ + Q ++D + E TS L A+ A P+++ K L+ +N AA D
Sbjct: 638 QTIAQEYVDVKTPEDSGFTSPILGEAI-------ARVPSILEDVVKFLNKINMHAARNDD 690
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL- 660
S + ++ + + S + EL+ ++ L + +++ SGI +LIE+
Sbjct: 691 KYEFFRESE-ETEGISEHKCGIASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLIEVE 749
Query: 661 ---PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
A +VP +W KV+ TKK R+H+PEV+ L Q E L C A+ + L E
Sbjct: 750 NTAAAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLAEIA 809
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y F+ +VQ+LA LDCL +LA ++ +V+P + D IH+ GRHP+++ +LL
Sbjct: 810 TNYQSFRDSVQSLATLDCLLSLAAIASQPGYVKPEYTDQ---TCIHVEQGRHPMVEQLLL 866
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D++VPND +L ++R ++TGPNMGGKS Y+RQ+ALI IMAQ+GS+VPA SA+L +LD
Sbjct: 867 DSYVPNDIDLDSDRTRALLVTGPNMGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLDA 926
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
++TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A L
Sbjct: 927 VFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVL 986
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
DY++ + + LF+THY ++++ F + H+ + S S D+++T+L
Sbjct: 987 DYMVRTIRSLTLFITHYQHLSNMAQSFPNHELRNVHMRFTES-------GSGKDEEITFL 1039
Query: 957 YKVVPGVSESSFGFKVAQLAQLP 979
Y+V GV+ S+G VA+LA LP
Sbjct: 1040 YEVGEGVAHRSYGLNVARLANLP 1062
>sp|Q4WGB7|MSH3_ASPFU DNA mismatch repair protein msh3 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=msh3 PE=3
SV=1
Length = 1123
Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust.
Identities = 340/923 (36%), Positives = 524/923 (56%), Gaps = 98/923 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TPLE+QV+E+K K+ D +L++EVGYKFRFFGEDA +AAK L I AH
Sbjct: 211 TPLEKQVIEIKRKHMDTILVVEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEHPSEAH 270
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL+VHV+RLV+AG+KVGVV+Q ETAA+KA G + PF R L+ LYT
Sbjct: 271 LDR-FASASIPVHRLHVHVKRLVSAGYKVGVVRQLETAALKAAGDNRNAPFSRKLTNLYT 329
Query: 196 KAT-LEAAEDVGGGEDGCGG----ESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
K T ++ E + G G + Y++C+ + + +G+ V +G+VAV
Sbjct: 330 KGTYVDDVEGLDGATPAASGGASPATGYMLCITETNAKG-------WGNDEKVHVGIVAV 382
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN---- 306
+ +TGDV+Y +F+DGF+RS +E LL ++P EL++ LSK TEK++ +G N
Sbjct: 383 QPNTGDVIYDDFDDGFMRSEVETRLLHIAPCELVIVGELSKATEKLVQHLSGSKLNTFGD 442
Query: 307 -VRVECASRDCFIGGGALAEVMSLYENMGEDTL--SNNEDQNMDVPEQGNHRSAIEGIMN 363
VRV+ ++ A+AE S N L +N D D P + ++ ++N
Sbjct: 443 KVRVDRVAKK----KTAVAESHSHVANFYAAKLKAANTAD---DAPAS----NLLQKVLN 491
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I+HL ++GLE I L F+ S M L+ANTL LE+ +N ++ S
Sbjct: 492 LPEQVTVCLSAMIQHLTEYGLEHIFELTKYFQHFSSRSHMLLNANTLVSLEIYQNQTDHS 551
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L ++ T T +G RLLR+WV PL D+ + R++AV E+
Sbjct: 552 AKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKERLEERVNAVEEL--------------- 596
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
K+ + T+ + +L + + D+++ + RI++ T E + V+Q +
Sbjct: 597 ---KSPERTVQAERLKIMLGKIKS------DLEKNLIRIYYGKCTRPELLTVLQTL---- 643
Query: 544 KQLQQLHIDGEYREK--VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
+ + Q ++D + + TS L A+ A P+++G K L+ +N AA D
Sbjct: 644 QTIAQEYVDVKTPQDSGFTSPILGEAI-------ARVPSILGDVVKFLNKINMHAARNDD 696
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL- 660
S + ++ + + S + EL+ ++ L + +++ SGI +LIE+
Sbjct: 697 KYEFFRESE-ETEGISEHKCGIASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLIEVE 755
Query: 661 ---PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
A +VP +W KV+ TKK R+H+PEV+ L Q E L C A+ + L E
Sbjct: 756 NSAAAIKRVPASWVKVSGTKKVSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLAEIA 815
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y F+ VQ+LA LDCL +LA ++ +V+P + D IH+ GRHP+++ +LL
Sbjct: 816 SNYQSFRDCVQSLATLDCLLSLAAIASQPGYVKPEYTDQ---TCIHVEQGRHPMVEQLLL 872
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D++VPND +L +++ ++TGPNMGGKS Y+RQ+ALI IMAQ+GS+VPA SA+L +LD
Sbjct: 873 DSYVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLDA 932
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
++TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A L
Sbjct: 933 VFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVL 992
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
DY++ + + LF+THY ++++ F + H+ + S S D+++T+L
Sbjct: 993 DYMVRTIRSLTLFITHYQHLSNMAQSFPDHELRNVHMRFTES-------GSGKDEEITFL 1045
Query: 957 YKVVPGVSESSFGFKVAQLAQLP 979
Y+V GV+ S+G VA+LA LP
Sbjct: 1046 YEVGEGVAHRSYGLNVARLANLP 1068
>sp|B0YCF6|MSH3_ASPFC DNA mismatch repair protein msh3 OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=msh3 PE=3 SV=1
Length = 1123
Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust.
Identities = 340/923 (36%), Positives = 524/923 (56%), Gaps = 98/923 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TPLE+QV+E+K K+ D +L++EVGYKFRFFGEDA +AAK L I AH
Sbjct: 211 TPLEKQVIEIKRKHMDTILVVEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEHPSEAH 270
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL+VHV+RLV+AG+KVGVV+Q ETAA+KA G + PF R L+ LYT
Sbjct: 271 LDR-FASASIPVHRLHVHVKRLVSAGYKVGVVRQLETAALKAAGDNRNAPFSRKLTNLYT 329
Query: 196 KAT-LEAAEDVGGGEDGCGG----ESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
K T ++ E + G G + Y++C+ + + +G+ V +G+VAV
Sbjct: 330 KGTYVDDVEGLDGATPAASGGASPATGYMLCITETNAKG-------WGNDEKVHVGIVAV 382
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN---- 306
+ +TGDV+Y +F+DGF+RS +E LL ++P EL++ LSK TEK++ +G N
Sbjct: 383 QPNTGDVIYDDFDDGFMRSEVETRLLHIAPCELVIVGELSKATEKLVQHLSGSKLNTFGD 442
Query: 307 -VRVECASRDCFIGGGALAEVMSLYENMGEDTL--SNNEDQNMDVPEQGNHRSAIEGIMN 363
VRV+ ++ A+AE S N L +N D D P + ++ ++N
Sbjct: 443 KVRVDRVAKK----KTAVAESHSHVANFYAAKLKAANTAD---DAPAS----NLLQKVLN 491
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I+HL ++GLE I L F+ S M L+ANTL LE+ +N ++ S
Sbjct: 492 LPEQVTVCLSAMIQHLTEYGLEHIFELTKYFQHFSSRSHMLLNANTLVSLEIYQNQTDHS 551
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
G+L ++ T T +G RLLR+WV PL D+ + R++AV E+
Sbjct: 552 AKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKERLEERVNAVEEL--------------- 596
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
K+ + T+ + +L + + D+++ + RI++ T E + V+Q +
Sbjct: 597 ---KSPERTVQAERLKIMLGKIKS------DLEKNLIRIYYGKCTRPELLTVLQTL---- 643
Query: 544 KQLQQLHIDGEYREK--VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
+ + Q ++D + + TS L A+ A P+++G K L+ +N AA D
Sbjct: 644 QTIAQEYVDVKTPQDSGFTSPILGEAI-------ARVPSILGDVVKFLNKINMHAARNDD 696
Query: 602 LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL- 660
S + ++ + + S + EL+ ++ L + +++ SGI +LIE+
Sbjct: 697 KYEFFRESE-ETEGISEHKCGIASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLIEVE 755
Query: 661 ---PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
A +VP +W KV+ TKK R+H+PEV+ L Q E L C A+ + L E
Sbjct: 756 NSAAAIKRVPASWVKVSGTKKVSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLAEIA 815
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL 777
Y F+ VQ+LA LDCL +LA ++ +V+P + D IH+ GRHP+++ +LL
Sbjct: 816 SNYQSFRDCVQSLATLDCLLSLAAIASQPGYVKPEYTDQ---TCIHVEQGRHPMVEQLLL 872
Query: 778 DNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDG 837
D++VPND +L +++ ++TGPNMGGKS Y+RQ+ALI IMAQ+GS+VPA SA+L +LD
Sbjct: 873 DSYVPNDIDLDSDKTRALLVTGPNMGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLDA 932
Query: 838 IYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATL 897
++TRMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A L
Sbjct: 933 VFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVL 992
Query: 898 DYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYL 956
DY++ + + LF+THY ++++ F + H+ + S S D+++T+L
Sbjct: 993 DYMVRTIRSLTLFITHYQHLSNMAQSFPDHELRNVHMRFTES-------GSGKDEEITFL 1045
Query: 957 YKVVPGVSESSFGFKVAQLAQLP 979
Y+V GV+ S+G VA+LA LP
Sbjct: 1046 YEVGEGVAHRSYGLNVARLANLP 1068
>sp|Q0CPP9|MSH3_ASPTN DNA mismatch repair protein msh3 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=msh3 PE=3 SV=1
Length = 1117
Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust.
Identities = 334/941 (35%), Positives = 529/941 (56%), Gaps = 94/941 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E+Q++++K K+ D +L ++VGYKFRFFGEDA +AAK L I AH
Sbjct: 207 TPMERQIIDMKRKHMDKILAVQVGYKFRFFGEDARVAAKELSIVCIPGKFRFDEHPSEAH 266
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP +L+VHV+RL+ AG KVG+V+Q ETAA+KA G + PF R L+ +YT
Sbjct: 267 LD-RFASASIPVHKLHVHVKRLITAGHKVGIVRQIETAALKAAGDNRNAPFVRKLTNVYT 325
Query: 196 KATLEAAEDVGGGEDGCGGESN-----YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
K T +D+ G E G Y++C+ + + +G+ V +G+VAV
Sbjct: 326 KGTY--IDDMEGLEGPTAGAGTTAATGYMLCITETNAKG-------WGNDEKVHVGIVAV 376
Query: 251 EISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV--- 307
+ +TGD+V+ +F DGF+RS +E LL L+P ELL+ LSK ++K++ AG NV
Sbjct: 377 QPATGDIVFDDFEDGFMRSEIETRLLHLAPCELLIVGDLSKASDKLVQHLAGSKMNVFGD 436
Query: 308 --RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMP 365
RVE ++ A + V S Y + + ++++ Q ++ ++ ++N+P
Sbjct: 437 KVRVERTTKSKTAAAEAHSHVSSFYADKVKSANASDDTQASNL---------LQKVLNLP 487
Query: 366 DLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEY 425
+ L+ I+H+ ++GLE + L F+ S M L+ NTL LE+ +N ++ S
Sbjct: 488 EQVSICLSSMIKHMTEYGLEHVFDLTKYFQHFSSRSHMLLNGNTLMSLEIYQNQTDHSSR 547
Query: 426 GTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHD 485
G+L ++ T T +G RLLR+WV PL D++ + R++A+ E+ +SM
Sbjct: 548 GSLFWTLDRTQTRFGQRLLRKWVGRPLLDKSKLEERVNAIEEL-KSM------------- 593
Query: 486 EKNSDVTIVEPQFYYILSSVLTSLGRSP-DIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
V +VE L VL G++ D+++ + RI++ T E + +Q + +
Sbjct: 594 ---EKVAMVER-----LKGVL---GKAKCDLEKILIRIYYGRCTRPELLTGLQTLQMIAQ 642
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+ + T+ L+ A+ AS P ++ L+ +N AA D
Sbjct: 643 EFGD--VKSPEDSGFTTPILNEAI-------ASLPTILEDVLSFLNKINLHAARNDDKYE 693
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
+ + +++ + + S + EL ++ K LG +++++V+GI +LIE+ N
Sbjct: 694 FFREAE-ETEDISEHKLGIASVEHELREYQSVAGKILGRSKIQYVTVAGIDYLIEVENNS 752
Query: 665 ----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+VP +W K++ TKK R+HSPEV+ L Q E L C A+ S L E Y
Sbjct: 753 SYLKRVPASWVKISGTKKLSRFHSPEVIKLLRQRDQHKEALAAACDHAYASLLAEIAANY 812
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
F+ VQ+LA +DCL +L++++ +V+P + D+ IH+ GRHP+++ +LLD++
Sbjct: 813 QPFRDCVQSLATIDCLLSLSSIANQPGYVKPEYADN---TCIHVEQGRHPMVEQLLLDSY 869
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPND NL +E ++TGPNMGGKS Y+RQ+ALI IM QVGS+VPA SA+L +LD ++T
Sbjct: 870 VPNDINLDSEETRALLVTGPNMGGKSSYVRQIALIAIMGQVGSYVPAQSAKLGMLDAVFT 929
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGA D++ G STF+ EL+E + IL+ T +SLVI+DELGRGTSTHDGVAIA A LDY+
Sbjct: 930 RMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYM 989
Query: 901 LEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKV 959
+ + + LF+THY ++ + F + H+ + S S D+++T+LY+V
Sbjct: 990 VRSLRSLTLFITHYQHLSSMVHSFPNHELRNVHMRFTES-------GSGQDEEITFLYEV 1042
Query: 960 VPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
GV+ S+G VA+LA LP I A +A+LE ++ R
Sbjct: 1043 GEGVAHRSYGLNVARLANLPVPLIEVAKQKSAELEQKIRRR 1083
>sp|Q1DQ73|MSH3_COCIM DNA mismatch repair protein MSH3 OS=Coccidioides immitis (strain RS)
GN=MSH3 PE=3 SV=2
Length = 1125
Score = 557 bits (1436), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/958 (34%), Positives = 526/958 (54%), Gaps = 96/958 (10%)
Query: 77 PTPSSQTTHNKK-----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLG 131
P PS++ +K TPLE+QV+++K K+ D +L++EVGYKFRFFGEDA +AAK L
Sbjct: 197 PPPSTKARGARKAASTKLTPLEKQVIDIKNKHKDAILVVEVGYKFRFFGEDARIAAKELS 256
Query: 132 IY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA 177
I AHL+ F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+KA
Sbjct: 257 IVCIPGKLRFDEHPSEAHLNR-FASASIPVHRLHVHVKRLVRAGHKVGVVRQLETAALKA 315
Query: 178 HGPGKAGPFGRGLSALYTKAT-LEAAEDVGG----GEDGCGGESNYLVCVVDDDGNVGKI 232
G + PF R L+ LYTK T ++ E++ G G + + YL+C+ + +
Sbjct: 316 AGDNRNAPFERKLTHLYTKGTYIDDTEELEGLNAVGANSAAPATGYLLCMTESNAKG--- 372
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQ 292
+G+ V++G++AV+ +TG++++ F DGF+R+ +E LL ++P E LL +S+
Sbjct: 373 ----WGNDEKVQVGILAVQPATGNIIHDSFEDGFMRTEIETRLLHIAPCEFLLIGDVSRA 428
Query: 293 TEKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMD 347
T+K++ +G NV RVE S+ + + V S Y + T + +++ D
Sbjct: 429 TDKLVQHLSGSKMNVFGDKVRVERVSKSKTAAAESHSHVSSFYAGRMKATSTTQDERARD 488
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSA 407
+ ++ ++N+P+ L+ I+HLK++ LE + L F+ S M L+
Sbjct: 489 L---------LDKVLNLPEDVTICLSAMIKHLKEYNLENVFDLTKYFQPFSARSHMLLNG 539
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
NTL LE+ +N + + G+L ++ T T +G RLLR+WV PL D+ + R+ AV+E
Sbjct: 540 NTLINLEIYQNQTEQTSKGSLFWTLDRTKTRFGQRLLRKWVGRPLLDKQELEDRVAAVTE 599
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
+ K+SD T + +LS V T D+++ + RI++
Sbjct: 600 L------------------KDSDATPRVGRLKTLLSKVKT------DLEKNLLRIYYGKC 635
Query: 528 TPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAK 587
T E + V+Q + + H+ S ++ A+ + P V+
Sbjct: 636 TRPELLTVLQTLQLIATEFS--HVKSPADAGFDSPVINEAI-------SQLPVVLDDVVS 686
Query: 588 LLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE 647
L+ +N +A D + S + E+ + + S + +L+ N + L + +
Sbjct: 687 YLNKINLHSAKADDKFSFFQESE-ETDEITEQKLGIGSVEHDLEEYRNTAAEILCKKKVC 745
Query: 648 FMSVSGITHLIELPANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
+++ +GI +LIE+ + K+P +W K++ TKK R+H PEV+ + + E L
Sbjct: 746 YVTNAGIEYLIEVENSSLQMKKIPASWRKISGTKKVSRFHPPEVVNLMRERDQHKEALAA 805
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIH 763
C A+ L + Y F+ +QALA LDC +LA ++ +VRP + D+ +I
Sbjct: 806 ACDKAFLGLLADISTKYQPFRDCIQALATLDCFMSLAAVAAQPGYVRPTYADE---ARIS 862
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
+ GRHP+++ +LLD +VPNDT L + ++TGPNMGGKS Y+RQVALI IM Q+GS
Sbjct: 863 VRGGRHPMVEQLLLDTYVPNDTELGTDGTRALLVTGPNMGGKSSYVRQVALISIMGQIGS 922
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
+VPA SA L +LD +YTRMGA D++ G STF+ EL+E S IL+ T +SLVI+DELGRG
Sbjct: 923 YVPAESATLGMLDAVYTRMGAFDNMLAGESTFMVELSETSDILKQATPRSLVILDELGRG 982
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVM 942
TSTHDGVAIA A LDY++ + + LF+THY ++++ F G + H+ + S
Sbjct: 983 TSTHDGVAIAQAVLDYMVRDIRSLTLFITHYQHLSNLARTFPNGELRNVHMKFTES---- 1038
Query: 943 GPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
K QD+T+LY+V GV+ S+G VA+LA +P S + A +A+LE ++ +
Sbjct: 1039 ----GKDGQDITFLYEVGEGVAHRSYGLNVARLANIPSSVLDVAYTKSAELEEKIKRK 1092
>sp|A1CDD4|MSH3_ASPCL DNA mismatch repair protein msh3 OS=Aspergillus clavatus (strain ATCC
1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=msh3
PE=3 SV=1
Length = 1130
Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust.
Identities = 345/962 (35%), Positives = 532/962 (55%), Gaps = 110/962 (11%)
Query: 77 PTPSSQTTHNKK-----YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLG 131
P P+++ +KK TPLE+QV+E+K K+ D +L+IEVGYK+RFFGEDA +AAK L
Sbjct: 201 PAPAAKGRGSKKAGGGKLTPLEKQVIEIKRKHMDTVLVIEVGYKYRFFGEDARIAAKELS 260
Query: 132 IY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA 177
I AHLD F +ASIP RL+VHV+RLV AG+KVGVV+Q ETAA+KA
Sbjct: 261 IVCIPGKMRFDEHPSEAHLD-RFASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAALKA 319
Query: 178 HGPGKAGPFGRGLSALYTKATLEAAEDVGGGED----GCGGES---NYLVCVVDDDGNVG 230
G + PF R L+ LYTK T +DV G E GG S YL+C+ + +
Sbjct: 320 AGDNRNAPFSRKLTNLYTKGTY--VDDVEGLEGPTPAASGGASPATGYLLCITETNAKG- 376
Query: 231 KIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLS 290
+G+ V +G+VAV+ +TGD++Y +F DGF+RS +E LL ++P EL++ LS
Sbjct: 377 ------WGNDERVHVGIVAVQPNTGDIIYDDFEDGFMRSEVETRLLHIAPCELVIVGELS 430
Query: 291 KQTEKMLLAYAGPASN-----VRVECASRDCFIGGGALAEVMSLY-ENMGEDTLSNNEDQ 344
K TEK++ +G N VRVE + + + V + Y + ++ + +
Sbjct: 431 KATEKLVQHLSGSKLNTFGDKVRVERVGKKKTAVAESHSHVANFYASKLKAASVDDTQTS 490
Query: 345 NMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT 404
N+ ++ ++ +P+ L+ I H+ ++GLE I L F+ S M
Sbjct: 491 NL-----------LQKVLTLPEQVTVCLSAMIEHMTEYGLEHIFQLTKYFQHFSSRSHML 539
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L+ANTL LE+ +N ++ S G+L ++ T T +G RLLR+WV PL D++ + R++A
Sbjct: 540 LNANTLVSLEIYQNQTDHSTKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKSRLEERVNA 599
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFH 524
V E+ KN + T+ + +L + + D+++ + RI++
Sbjct: 600 VEEL------------------KNPEKTVQVERLKRLLGRIKS------DLEKNLIRIYY 635
Query: 525 RTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGK 584
T E + V+Q + + + Q + D + E S +L + AS P ++
Sbjct: 636 GKCTRPELLTVLQTL----QTIAQEYADVKSPE---DNGFASPVLGEAV--ASLPTILKD 686
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
L+ +N AA D S + E++ + + S + EL+ + L
Sbjct: 687 VVAFLNKINMHAARSDDKYEFFRESE-ETDEISEHKLGIASVEHELEEHRAVAAGILKWP 745
Query: 645 NLEFMSVSGITHLIELP----ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
+ +++ SGI +LIE+ A +VP +W KV+ TKK R+H+PEV+ L Q E
Sbjct: 746 KVVYVTSSGIEYLIEVENTSNAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEA 805
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV 760
L C A+ + L E Y F+ VQALA LDCL +LA ++ +V+P + D
Sbjct: 806 LAAACDKAFAALLAEIAVNYQLFRDCVQALATLDCLLSLAAIASQPGYVKPEYTD----- 860
Query: 761 QIHIC----SGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIG 816
H C GRHP+++ +LLD++VPNDT+L ++ ++TGPNMGGKS Y+RQVALI
Sbjct: 861 --HTCICVEQGRHPMVEQLLLDSYVPNDTDLDTDQTRALLVTGPNMGGKSSYVRQVALIA 918
Query: 817 IMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVI 876
IM Q+GS+VPA SA+L +LD ++TRMGA D++ G STF+ EL+E + IL+ T +SLVI
Sbjct: 919 IMGQIGSYVPARSAKLGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVI 978
Query: 877 VDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTG-SVGTYHVSY 935
+DELGRGTSTHDGVAIA A LDY++ + + LF+THY ++++ F + H+ +
Sbjct: 979 LDELGRGTSTHDGVAIAQAVLDYMVRTIRSLTLFITHYQHLSNMTQSFPDHELRNVHMRF 1038
Query: 936 LTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEA 995
S + D+++T+LY+V GV+ S+G VA+LA LP + A + +A+LE
Sbjct: 1039 TES-------GAGQDEEITFLYEVGEGVAHRSYGLNVARLANLPAPLLDVAKLKSAELEE 1091
Query: 996 EV 997
++
Sbjct: 1092 QI 1093
>sp|Q0UXL8|MSH3_PHANO DNA mismatch repair protein MSH3 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=MSH3 PE=3 SV=3
Length = 1119
Score = 550 bits (1416), Expect = e-155, Method: Compositional matrix adjust.
Identities = 329/964 (34%), Positives = 521/964 (54%), Gaps = 105/964 (10%)
Query: 75 PIPTPS-----SQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKV 129
P P P+ + T K TP+E Q +++K K+ D ++++EVGYKF+FFGEDA A+K
Sbjct: 199 PAPKPTKGRKGAATKKTSKLTPMELQYLDIKRKHMDTVIVMEVGYKFKFFGEDARTASKE 258
Query: 130 LGIY--------------AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAI 175
LGI AH D F +AS P RL VHV+RLV A KVGVV+Q ETAA+
Sbjct: 259 LGIVCIPGKFRYDEHPSEAHYDR-FASASFPVHRLQVHVKRLVKANHKVGVVRQLETAAL 317
Query: 176 KAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGE--SNYLVCVVDDDGNVGKIR 233
KA G + PF R L+ LYTK T +D+ G E G + YL+CV + +
Sbjct: 318 KAAGNNRNTPFVRKLTNLYTKGTY--VDDIEGLETPTAGAQATGYLLCVTETNAKG---- 371
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT 293
+G V++G+VAV+ +TGD++Y +F DGF+RS +E LL ++PAE L+ LSK T
Sbjct: 372 ---WGTDEKVQVGLVAVQPATGDIIYDDFEDGFMRSEIETRLLHIAPAEFLIVGDLSKAT 428
Query: 294 EKMLLAYAGPASNV-----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDV 348
+K++ + +NV RVE + + A + + + Y D+
Sbjct: 429 DKLIHHLSASKTNVFGDRSRVERVEKPKTMAAQAYSHISNFYA-----------DKMKSS 477
Query: 349 PEQGNHRSAI-EGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSA 407
E G+ + AI + + + + L+ I +L + LE + L F+ S M L+
Sbjct: 478 QEGGSEQGAILDKVHQLSEHVTICLSAMITYLSDYALEHVFDLTKYFQPFSARSYMLLNG 537
Query: 408 NTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSE 467
NTL LE+ +N ++ + G+L M+ T T +G RLLR+WV PL D+ + R+ AV E
Sbjct: 538 NTLSSLEIYQNQTDYTSKGSLFWTMDRTKTRFGQRLLRKWVGRPLIDKERLEERIAAVEE 597
Query: 468 IAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTA 527
+ E G+H TI + ++L + T D+++ + RI+++
Sbjct: 598 LKE-----------GEH-------TIAVDKVKFLLGKIKT------DLEKVLIRIYYKKC 633
Query: 528 TPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILT---ASSPAVIGK 584
+ E +A +Q + Q +++KT + ++L+ ++ P +
Sbjct: 634 SRPELLAALQILQDIASQY------------LSAKTPEQSGFSSILLSEAVSNVPKIYED 681
Query: 585 AAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR 644
L +N +AA D + ++ + ++ S +++L++ +LG
Sbjct: 682 VNSFLEKINAKAAKDDDKYGFFR-EEFEAEDINDLKLSIASVEDDLNTHRKDAAAKLGKT 740
Query: 645 NLEFMSVSGITHLIELPANF----KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEE 700
+++++V+GI +LIE+ KVP +W ++++TK T+R+H+PEV L + E
Sbjct: 741 KVDYVTVAGIEYLIEVKRKSVEEKKVPASWQQISATKTTLRFHTPEVKRMLQERDQYKES 800
Query: 701 LTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPV 760
L C A+ L + Y + V +LA LD L +LATL+ +V+P FV E
Sbjct: 801 LAAACDTAFKRLLDDIAAKYQSLRDCVSSLATLDALLSLATLANQPGYVKPTFV---ETT 857
Query: 761 QIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQ 820
++ I GRHP+++ +LLD +VPND +L + ++TGPNMGGKS Y+R ALI IM Q
Sbjct: 858 ELDIVGGRHPMVEQLLLDAYVPNDVHLSGDATRALLVTGPNMGGKSSYVRSAALIAIMGQ 917
Query: 821 VGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDEL 880
+GS+VPA SA+L +LD ++TRMGA D++ +G STF+ ELNE + ILR+ T++SL+I+DEL
Sbjct: 918 IGSYVPAESAKLGMLDAVFTRMGALDNMLKGESTFMVELNETADILRSATSRSLIILDEL 977
Query: 881 GRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK 940
GRGTST DGVAIA A LDY++ + LF+THY +A ++ +F G + H+S+
Sbjct: 978 GRGTSTFDGVAIAEAVLDYVIRDVGALTLFITHYQHLARLQDRFNGELKNVHMSF----- 1032
Query: 941 VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS-S 999
+ ++V +LY+V G S S+G VA+LA++P I A V +++LE + S
Sbjct: 1033 ----EERDGGKEVVFLYEVAEGTSHRSYGLNVARLAKVPEKVIETAEVKSSELEESMGIS 1088
Query: 1000 RVQN 1003
RV N
Sbjct: 1089 RVAN 1092
>sp|A6RPB6|MSH3_BOTFB DNA mismatch repair protein msh3 OS=Botryotinia fuckeliana (strain
B05.10) GN=msh3 PE=3 SV=2
Length = 1133
Score = 544 bits (1402), Expect = e-153, Method: Compositional matrix adjust.
Identities = 330/955 (34%), Positives = 524/955 (54%), Gaps = 106/955 (11%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E QV+++K K+ D LL++EVGYKF+FFGEDA AAKVL I +H
Sbjct: 211 TPMELQVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSESH 270
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
L++ F +ASIP RL VH +RLV AG+K+G+V+QTETAA+K G + PF R L+ +YT
Sbjct: 271 LNY-FASASIPVHRLPVHAKRLVAAGYKIGIVRQTETAALKKAGDNRNAPFVRKLTNVYT 329
Query: 196 KAT-------LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVV 248
K T L+ + GG G YL+C+ + + +G V +G++
Sbjct: 330 KGTYIDDIDGLDTTDAPSGGAPATG----YLLCITE-------TKAKGWGTDEKVEVGIL 378
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TGDV+Y F DGF+R LE LL ++P ELL+ L+K T+K++ +G ++NV
Sbjct: 379 AVQPATGDVIYDNFEDGFMRGELETRLLHIAPCELLIVGELTKATDKLVQHLSGSSTNVF 438
Query: 308 ----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
RVE + + + + V Y D L ++ N + +E ++
Sbjct: 439 GDRIRVERVGKSKTMAAESYSRVAQFYA----DKLKAHQSSN-----NAREQELLEKVLK 489
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+ + L+ I H+ ++GLE + L F+S S M L+ NTL LE+ N ++ +
Sbjct: 490 LTEPVTICLSAMITHMTEYGLEHVFDLTKYFQSFSARSHMLLNGNTLTSLEIYTNQTDYT 549
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
+ G+L ++ T T +G RLLR+WV PL D+ + R+ AV E+ ++ + +
Sbjct: 550 QKGSLFWTLDKTQTKFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNANTPKV------ 603
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
D+ N+ + V RS D++R + RI++ T E + V+Q +
Sbjct: 604 -DKLNATLREV----------------RS-DLERSLLRIYYGKCTRPELLTVLQTMQRIA 645
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
+ H+ S L+ A+ AS PA+ L +N +AA D
Sbjct: 646 NEFA--HVKTPSDAGFESIALNEAV-------ASLPAIGEIVISFLDKINAQAARNDDKY 696
Query: 604 NLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELP- 661
+ + + + + + + +++L++ + +L + + +++++GI +LIE+P
Sbjct: 697 AFFL-EHYETEAIGDHKCGIGAVEQDLEAHRMVAATKLSKKTPVTYVTIAGIEYLIEVPN 755
Query: 662 ANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
+ K VP +WAK++ TKK R+H+PEV+ L + E L+ C AA+ +FL E +Y
Sbjct: 756 TDLKNVPASWAKISGTKKMSRFHTPEVIKFLRERDQHKESLSSACDAAFSTFLSEISTHY 815
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
A + + LA LDCL +LAT++ + +P F E I + GRHP+++ +L +
Sbjct: 816 ALIRDTISHLATLDCLLSLATVASLPGYCKPTFTSSTE---ISVIGGRHPMVEQLLPSAY 872
Query: 781 VPNDTNLHAEREYCQ--IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGI 838
+PNDT+L ++ + ++TGPNMGGKS Y+RQVALI I+AQ+GS+VPA SA L +LDGI
Sbjct: 873 IPNDTSLSTSPDHTRALLLTGPNMGGKSSYVRQVALISILAQIGSYVPAESARLGLLDGI 932
Query: 839 YTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLD 898
YTRMGA DS+ +STF+ EL+E + IL++ +SLVI+DELGRGTSTHDGVAIA A LD
Sbjct: 933 YTRMGAYDSLFTAQSTFMVELSETASILKSAGPRSLVILDELGRGTSTHDGVAIAEAVLD 992
Query: 899 YLLEHKKCMVLFVTHYPKIA-------------DIKTKFTGSVGTYHVSYLTSHKVMGPM 945
+++ KC+ LF+THY +A ++ KFT VS + K
Sbjct: 993 WVVRETKCLCLFITHYQTLASVARGFEKGKELRNVHMKFTAERNGRRVSNADADK----D 1048
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+ D+++T+LY+V GV+ S+G VA+LA++P S + A + +LE +V +
Sbjct: 1049 NEDFDEEITFLYEVGEGVAHRSYGLNVARLARVPKSVLDTAASKSRELETQVKQK 1103
>sp|A7EC69|MSH3_SCLS1 DNA mismatch repair protein msh3 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=msh3 PE=3 SV=1
Length = 1130
Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust.
Identities = 326/948 (34%), Positives = 517/948 (54%), Gaps = 95/948 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----------AHLDH 138
TP+E QV+++K K+ D LL++EVGYKF+FFGEDA AAKVL I AHL++
Sbjct: 211 TPMELQVLDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEQAHLNY 270
Query: 139 NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
F +ASIP RL +H +RLV AG K+G+V+QTETAA+K G + PF R L+ +YTK T
Sbjct: 271 -FASASIPVHRLPIHAKRLVAAGHKIGIVRQTETAALKKAGDNRNTPFVRKLTNVYTKGT 329
Query: 199 -------LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
L++ + GG G YL+C+ + + +G V +G++AV+
Sbjct: 330 YIDDIEGLDSTDAPSGGAPATG----YLLCITE-------TKAKGWGTDEKVEVGILAVQ 378
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV---- 307
+TGD +Y F DGF+RS +E LL ++P E L+ L+K TEK++ +G +NV
Sbjct: 379 PATGDFIYDNFEDGFMRSEIETRLLHIAPCEFLIVGELTKATEKLVQHLSGSTTNVFGDR 438
Query: 308 -RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD 366
RVE + + + + V Y D L ++ N + +E ++ + +
Sbjct: 439 IRVERVEKPKTMAAESYSRVAQFYA----DKLKAHQSSN-----NAREQELLEKVLRLTE 489
Query: 367 LAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYG 426
L+ I H+ ++GLE + L F+S S M L+ NTL LE+ N ++ +E G
Sbjct: 490 PVTICLSAMITHMTEYGLEHVFDLTKYFQSFSARSHMLLNGNTLTSLEIYTNQTDHTEKG 549
Query: 427 TLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDE 486
+L ++ T T +G RLLR+WV PL D+ + R+ AV E+ +++ + + D+
Sbjct: 550 SLFWTLDKTQTRFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNVNTPKV-------DK 602
Query: 487 KNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQL 546
N+ + V RS D++R + RI++ T E + V+Q + +
Sbjct: 603 LNATLREV----------------RS-DLERSLLRIYYGKCTRPELLTVLQTMQRIANEF 645
Query: 547 QQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLM 606
+ I + S LL + AS P + G L +N +AA + D
Sbjct: 646 AHVKIPSD-------AGFDSVLLNEAV--ASLPEIGGVVISFLEKINAQAARKDDKYAFF 696
Query: 607 IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELPAN-- 663
+ + + + +++L++ +L + + +++++GI +LIE+P +
Sbjct: 697 LEEYETEEIGEH-KCGIGAVEQDLEAHRKEAASKLSKKTPVTYVTIAGIEYLIEVPNSDL 755
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
KVP +WAK++ TK R+H+PEV+ L + E L+ C A+ +FL E +YA
Sbjct: 756 KKVPASWAKISGTKSNSRFHTPEVIKFLRERDQHKESLSSACDTAFLAFLAEISTHYALI 815
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
+ + LA LDCL +LA ++ + +P F E I + GRHP+++ +L ++PN
Sbjct: 816 RDTISQLATLDCLLSLAAVASLPGYCKPTFTSTTE---ISVVGGRHPMVEQLLPSTYIPN 872
Query: 784 DTNLHAEREYCQ--IITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
DT+L + + + +ITGPNMGGKS Y+RQVALI I+AQ+GS VPA SA L +LDGIYTR
Sbjct: 873 DTSLSTDPDNTRALLITGPNMGGKSSYVRQVALISILAQIGSHVPAESARLGLLDGIYTR 932
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
MGA DS+ +STF+ EL+E + IL++ + +SLVI+DELGRGTSTHDGVAIA A LD+++
Sbjct: 933 MGAYDSLFTAQSTFMVELSETASILKSASPRSLVILDELGRGTSTHDGVAIAEAVLDWVV 992
Query: 902 EHKKCMVLFVTHYPKIADIKTKFT--GSVGTYHVSYLTSHKVMGPMDSKSDQD------- 952
KC+ LF+THY +A + F + H+ + ++ +D+D
Sbjct: 993 RETKCLCLFITHYQTLASVARGFEKGKELRNVHMRFTAERNGKQVSNANADKDGEDVNEE 1052
Query: 953 VTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+T+LY+V GV+ S+G VA+LA++P + + A + +LEAEV +
Sbjct: 1053 ITFLYEVGEGVAHRSYGLNVARLARVPKAVLDTAASKSRELEAEVKQK 1100
>sp|Q1ZXH0|MSH3_DICDI DNA mismatch repair protein Msh3 OS=Dictyostelium discoideum GN=msh3
PE=3 SV=1
Length = 1428
Score = 534 bits (1375), Expect = e-150, Method: Compositional matrix adjust.
Identities = 352/981 (35%), Positives = 534/981 (54%), Gaps = 123/981 (12%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLEQQ + +K + PD +LM+E GYK++FFGEDAE+A KVL IY+++ NF+ SIPT
Sbjct: 453 YTPLEQQYIAIKKENPDTVLMVECGYKYKFFGEDAEVANKVLNIYSYVAKNFLNCSIPTQ 512
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGG 208
RL H+RRLV AG+KVG+V+QTETAA+KA K+ PF R L+ +YT +T +D+
Sbjct: 513 RLFFHLRRLVMAGYKVGIVEQTETAALKAISSSKSQPFERKLTRVYTSSTF-IDDDI--- 568
Query: 209 EDGCGGES-NYLVCVVD------DDGNVGKIRNGVFGDGFDVR-------LGVVAVEIST 254
+D S +LV + +D + K R+ +G D + VAV + T
Sbjct: 569 DDQLTSSSPQFLVSFYESTPKNKNDDVIKKQRDNE-EEGIDSSNESSTSTISFVAVSVKT 627
Query: 255 GDVVYGEFNDGFLRSGLEAVLLSLSPAELLL---GQPLSKQ----------------TEK 295
G+++Y F D +RS LE +L + P+E+L+ ++KQ T K
Sbjct: 628 GEIIYDTFKDNVMRSQLETILTHIKPSEILIPPTTTTVNKQKVNNGIGTNHYYFSNLTSK 687
Query: 296 MLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHR 355
L Y ++NVR + + +L +++ YE+ E +NN + DV +
Sbjct: 688 CLKTYTK-STNVRTQAMDSQLYDYEYSLGKLIDFYED--ESNNNNNNNNCEDVLK----- 739
Query: 356 SAIEGIMNMPDLAVQALALTIRHLKQF-GLERIMCLGASFRSLSGSMEMTLSANTLQQLE 414
++ +N + L + + +L +F I+ + ++F++ S + L +T+ LE
Sbjct: 740 -FVKSTLNKEQII--CLGILLSYLNEFIHFGSILKVESNFKAFRVSNHLVLPHSTIVNLE 796
Query: 415 VLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGS 474
+L N S+ E G+L+ +MN T T GSR+ W+ PL LI R DAV E+ + +
Sbjct: 797 LLVNESDNKEKGSLIWLMNRTSTFSGSRMFINWICKPLNQLELIKERQDAVEELVNGIKT 856
Query: 475 YRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT-ATPSEFI 533
NS P I+S + + PD+QR ++RI+++ TP EF+
Sbjct: 857 -------------NS------PPIVSIISLFKSHI---PDLQRNLSRIYYKVQCTPKEFL 894
Query: 534 AVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLIL--------TASSPAVIGKA 585
M ++ + ++++ + +S +S LL + + S IG
Sbjct: 895 NTMTSLQRIVELFKEINNNN------SSYKFNSTLLNSIFKLQNDNKDGDSDSFDYIGGE 948
Query: 586 AKL-------LSTVNKEAADQ-----GDLLNLMIISNGQFSEVARARKAVQSAKEELDSL 633
KL LS +NKE A + D NL + ++ ++ ++ ++ ++E ++
Sbjct: 949 DKLSKRIKYFLSNINKETAKEYGTVGCDKSNLWV-DLEKYEKIRETKEKIEQVEKEFKNV 1007
Query: 634 INMCRKQLGMRNLEF--MSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTA 690
+ RK+L +LE+ M G+ +L+ELP +FK VP +W KVNST+K RYH+PEVL
Sbjct: 1008 LKNIRKELSKPSLEYHHMPGLGLEYLLELPPSFKAVPKSWIKVNSTQKMARYHAPEVLEQ 1067
Query: 691 LDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVR 750
L L+ + E L I + +W SFL EF Y+ F V ++ LDCL +LA +S + ++R
Sbjct: 1068 LKILSQSRETLKIQSQESWISFLGEFSVDYSLFSNFVNKISNLDCLFSLAKVSSLEGYIR 1127
Query: 751 PVFVDDHEPVQIHICSGRHPVLDTILLDN---FVPNDTNLHAEREYCQIITGPNMGGKSC 807
P FV + + I I +GRHPV++ IL + +VPN L IITGPNMGGKS
Sbjct: 1128 PQFVKEKKDGGIQIENGRHPVVEAILSGSDGSYVPNTIELRESACKSMIITGPNMGGKSS 1187
Query: 808 YIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILR 867
+RQ ALI IMAQVG FVPA+S L V D IYTRMGA DSI G+STF EL E S IL+
Sbjct: 1188 LLRQTALIVIMAQVGCFVPATSCSLSVFDAIYTRMGARDSIGTGKSTFFIELEETSDILK 1247
Query: 868 NCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGS 927
N T +LVI+DELGRGTST+DGVAIAY+TL Y++E KC LFVTHYP +A ++ ++
Sbjct: 1248 NSTQNTLVILDELGRGTSTNDGVAIAYSTLKYIVEVMKCYCLFVTHYPLLAQLELQYPTQ 1307
Query: 928 VGTYHVSYLTSHKVMGPMDSKSDQD--------VTYLYKVVPGVSESSFGFKVAQLAQLP 979
VG +H MG ++ K DQ V +LYK+V G +++S+G +A+LA LP
Sbjct: 1308 VGNFH---------MGYLEEKQDQQLQKSVIPKVIFLYKLVKGAAQNSYGLNIARLAGLP 1358
Query: 980 PSCISRATVIAAKLEAEVSSR 1000
I+ A + +++ ++ R
Sbjct: 1359 MEVIADALKKSNEMKESITRR 1379
>sp|Q7SD11|MSH3_NEUCR DNA mismatch repair protein msh-3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=msh-3 PE=3 SV=1
Length = 1145
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 329/978 (33%), Positives = 516/978 (52%), Gaps = 122/978 (12%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D LL++EVGYKFRFFGEDA +AA+ L I AH
Sbjct: 187 TPMELQFLEIKRKHMDTLLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHPSEAH 246
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG+KVGVV+Q ETAA+K G + PF R L+ +YT
Sbjct: 247 LDR-FASASIPVHRLPVHAKRLVAAGYKVGVVRQIETAALKKAGDNRNAPFVRKLTNVYT 305
Query: 196 KATL--EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVE 251
K T E E GE YL+C+ + G G D V +G++AV+
Sbjct: 306 KGTYIDETGELDQPGETTGASSGGYLLCLTETPAK---------GMGTDEKVNVGIIAVQ 356
Query: 252 ISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVEC 311
+TGD++Y EF DGF+R +E LL +SP E L+ LSK T+K++ +G ++NV
Sbjct: 357 PATGDIIYDEFEDGFMRREIETRLLHISPCEFLIVGDLSKATDKLIQHLSGSSTNV---- 412
Query: 312 ASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA--IEGIMNMPDLAV 369
G + E + + M ++ SN D + + RSA + ++ +P+ +
Sbjct: 413 ------FGDKSRVERVPKSKTMAAESYSNVTDFYAGKAKDSDERSAALLNKVLKLPEAVM 466
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
L+ I HL ++GL+ I L F+S S M ++ TL+ LEV RN ++ SE G+LL
Sbjct: 467 ICLSAMITHLTEYGLQHIFDLTKYFQSFSTRQHMLINGTTLESLEVYRNATDHSEKGSLL 526
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
++ T T +G RLLR+W+ PL D+ + R+ AV E+ + + + + V
Sbjct: 527 WALDKTHTRFGQRLLRKWIGRPLLDQQRLEERVSAVEELLNNQSTAKVDKLVN------- 579
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
+L S+ D++R + RI++ T E ++ +Q LQ++
Sbjct: 580 -----------MLKSI------KADLERSLIRIYYGKCTRPELLSTLQT-------LQKI 615
Query: 550 HIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIIS 609
+ + S LL I+T P++ LS +N EAA + D +
Sbjct: 616 SFEYARVKSPADTGFSSTLLTSAIMTL--PSISPMVTAHLSKINAEAARKDDKYAFFL-E 672
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMR-NLEFMSVSGITHLIELPAN--FKV 666
+ +++ + + + +++LD + K LG + + +++V+GI +LIE+P +V
Sbjct: 673 QHETEDISEHKLGIAAVEQDLDEHRSEAAKDLGKKVPVNYVTVAGIEYLIEVPNTDLKRV 732
Query: 667 PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAA 726
P +WAK++ TKK R+H+P VL + + E L C A+ L + G Y + A
Sbjct: 733 PASWAKISGTKKVSRFHTPTVLRLIAERDQHKESLASACDQAFSDLLSQIAGEYQPLRDA 792
Query: 727 VQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVP---- 782
V +L+ LDCL +L+T++ + +P F+ P + I GRHP+ + +L + ++P
Sbjct: 793 VSSLSTLDCLLSLSTVAALPGYTKPTFLPSSHPSFLSITEGRHPIAEHLLPNGYIPFTMS 852
Query: 783 -------------NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
N T+ + Q+ITGPNMGGKS Y R VAL+ ++AQ+GSFVPA+S
Sbjct: 853 LGTLSSSASSPDPNPTSPSGKPALAQLITGPNMGGKSSYTRAVALLVLLAQIGSFVPATS 912
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
L + D I+TRMGA D++ +G STF+ E++E + ILR T +SLV++DELGRGTSTHDG
Sbjct: 913 MSLTLSDAIFTRMGARDNLFKGESTFMVEVSETAAILRQATPRSLVVLDELGRGTSTHDG 972
Query: 890 VAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG--------TYHVSYLTSHKV 941
AIA A L+Y++ C++LFVTHY +A + T G H+ + S+K
Sbjct: 973 RAIAGAVLEYVVRDVGCLMLFVTHYQDLAGVAEGLTVGEGEEKRRGVECVHMRF-ASNKS 1031
Query: 942 MGPMDSKS-------------------DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSC 982
MD + ++++T+LY + PGV+ S+G VA+LA++P
Sbjct: 1032 RTSMDDDAMEVDGDGDGQEGAGADKDEEEEITFLYDLAPGVAHRSYGLNVARLARIPRKV 1091
Query: 983 ISRATVIAAKLEAEVSSR 1000
+ A +++LE EV ++
Sbjct: 1092 LEVAARKSSELEKEVRAK 1109
>sp|Q2HFD4|MSH3_CHAGB DNA mismatch repair protein MSH3 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=MSH3 PE=3 SV=1
Length = 1156
Score = 529 bits (1362), Expect = e-149, Method: Compositional matrix adjust.
Identities = 330/943 (34%), Positives = 509/943 (53%), Gaps = 91/943 (9%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA----------HLDHN 139
TP+E Q +++K K+ D +L++EVGYKFRFFGEDA +AAK L I H+D
Sbjct: 229 TPMEIQFLDIKRKHMDTVLVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEPHID-R 287
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
F +ASIP RL+VHV+RLV AG KVGVV+Q ETAA+K G + PF R L+ +YTK T
Sbjct: 288 FASASIPVHRLSVHVKRLVAAGHKVGVVRQLETAALKKAGDNRNAPFVRKLTNIYTKGTY 347
Query: 200 --EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVVAVEISTG 255
E E GE YL+C+ + + V G G D V +GV+AV+ +TG
Sbjct: 348 IDETGELDQPGEGAGASAGGYLLCLTE---------SPVKGLGTDENVHIGVMAVQPATG 398
Query: 256 DVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV-----RVE 310
D++Y +F DGF+R +E LL +SP ELL+ LSK T K++ AG ++NV RVE
Sbjct: 399 DIIYDDFEDGFMRREIETRLLHISPCELLVVGELSKATNKLVQHLAGSSTNVFGDRSRVE 458
Query: 311 CASRDCFIGGGALAEVMSLYENM--GEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLA 368
+ + A + V Y G+D S S ++ ++ +P+
Sbjct: 459 RVPKSKTMAAEASSHVTQFYAGKVKGDDERSA---------------SLLDKVLKLPESV 503
Query: 369 VQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTL 428
L+ I HL ++GLE I L F+S + M ++ TL+ LEV RN ++ SE G+L
Sbjct: 504 TVCLSAMITHLTEYGLEHIFDLTKYFQSFTTRQHMLINGTTLESLEVYRNATDQSEKGSL 563
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
L ++ T T G RLLR+W+ PL DR + R+ AV E+ E +++
Sbjct: 564 LWALDKTRTRPGRRLLRKWIGRPLLDRERLEERVTAVEELLEHQSNFKVDR--------- 614
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ 548
L VL S+ D++R + RI++ T E ++ +Q LQ+
Sbjct: 615 -------------LGGVLNSI--KADLERSLIRIYYGKCTRPELLSTLQT-------LQR 652
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
+ I+ + +S+L+ I + P + + L +N EAA + D
Sbjct: 653 ISIEFSRVKTPEDTGFNSSLIVEAIY--ALPGIGTIVSAYLDKINPEAARKDDKYTFFR- 709
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHLIELP-ANFK- 665
+ + ++ + + + + +LD +L + + +++VSGI +LIE+P + K
Sbjct: 710 DDEETEDITNHKLGIAAVEADLDVHRKDAATKLSKKTPVTYVTVSGIEYLIEVPNTDLKH 769
Query: 666 VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQA 725
VP +WAK++ TKK R+H+PEV+ +++ E L C A+ LK Y +
Sbjct: 770 VPASWAKISGTKKLSRFHTPEVMRLMNERDQHKEALAAACDNAFTDLLKSIASEYQPLRD 829
Query: 726 AVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDT 785
AV +LA LDCL +LA ++ + +P F+ P I I SGRHP+ + L D ++P T
Sbjct: 830 AVASLATLDCLLSLAQVASLPGYSKPTFLPTATPPTISITSGRHPIAEHTLPDGYIPFTT 889
Query: 786 NLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGAS 845
+L + Q+ITGPNMGGKS Y+R VAL+ ++AQ+GS+VPA + L + D IYTRMGA
Sbjct: 890 SLASPSPLAQLITGPNMGGKSSYVRAVALLVLLAQIGSYVPAEAMSLTLTDAIYTRMGAR 949
Query: 846 DSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKK 905
D++ G STF+ E++E + ILR TA+SLV++DELGRGTSTHDG AIA+A L ++ +
Sbjct: 950 DNLFAGESTFMVEVSETAAILRGATARSLVVLDELGRGTSTHDGAAIAHAVLAHVARETR 1009
Query: 906 CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK--------VMGPMDSKSDQDVTYLY 957
C+ LF+THY +A + G+V H+ + + + + +D+++T+LY
Sbjct: 1010 CLTLFITHYQNLARVADGLGGAVRCVHMRFEATGRQRDEAADGDADAAAADADEEITFLY 1069
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+V GV+ S+G VA+LA++P + A + ++E V +R
Sbjct: 1070 EVADGVAHRSYGLNVARLARIPRRVLDVAARKSREMEEGVKAR 1112
>sp|P0CO92|MSH3_CRYNJ DNA mismatch repair protein MSH3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=MSH3 PE=3 SV=1
Length = 1191
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 341/975 (34%), Positives = 532/975 (54%), Gaps = 115/975 (11%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q +E+K + DVLL++EVGYK++F GEDA+ A++ LGI A + NF TASIPT
Sbjct: 239 YTPLEKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGIVAFPNRNFFTASIPTH 298
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED---- 204
RL++HV++L++ G+KVGV+ QTETAA+K G + PF R L+ L+T AT ED
Sbjct: 299 RLHIHVKKLLSLGYKVGVITQTETAALKKIGDNRNAPFARKLTHLFTAATY--VEDPSLS 356
Query: 205 --------VGGGEDGCGGE----SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
V + G +N LV +V+ V + + V++G+V V
Sbjct: 357 SSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQP--VDRASDD------RVKVGLVCVVP 408
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPASN----- 306
TGD+ + EF+D +R+ LE L LSPAELLL Q LSK TEK+L +AG +
Sbjct: 409 GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLSKATEKVLTYFAGEPKHRGRNA 468
Query: 307 VRVE--------------------CASRDCFIGGGALAE----------VMSLYENMGED 336
VR+E C + G + + SL + +D
Sbjct: 469 VRIERIDNIPEYDAAFDFLTNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLSQD 528
Query: 337 TLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRS 396
+ D+ + + + AI +++ P V ++A+ IR++K+FGLE +SF
Sbjct: 529 GADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKHTSSFVR 588
Query: 397 LSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRN 456
+ M LS+NTL LE+ +N ++G YG+L+ +++H T G RLLR WV PL D
Sbjct: 589 FANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLREWVGRPLLDVA 648
Query: 457 LISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQ 516
+ AR DA+ EI E+ SY H EK L S+L ++ PD+
Sbjct: 649 ALKARADAIEEIMEN-NSY--------HMEK--------------LRSLLINM---PDLV 682
Query: 517 RGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTA 576
RG+TR+ + ATP+E ++ ++ + E++ + S LL + T
Sbjct: 683 RGLTRVQYGKATPNELATLLITLV---------RLASEFKPNM-GNVFRSCLLNNIPNTL 732
Query: 577 SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
P ++ + + L+ +N + A + D+ NL + +F ++ + + + EL+ +
Sbjct: 733 --PTILDTSQRFLNALNLKQARENDVANLWADPD-RFPDIQDVKDCISVCEMELNEHLME 789
Query: 637 CRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
RK L L +++VSGI +L+E+P VP W K+++T+ RYH+P++L +
Sbjct: 790 LRKILKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKER 849
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
E+L+IV R A+ +F E Y+ E + +A +DCL +LA + + +P FV
Sbjct: 850 TQHLEKLSIVAREAFIAFQSEVAEYH-ELVVVSKQIAVIDCLMSLAQTAAASGYCKPKFV 908
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
+ E + I +GRHP+++ + +++VP D + E +IITGPNM GKS +R +AL
Sbjct: 909 AEPE---LKILAGRHPMVEMLREESYVPFDIHFSKEEGTTKIITGPNMAGKSSTVRAMAL 965
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
I MAQ+GSFVPA+S L V D + TRMGASD I +G+STF+ EL+E S IL+ T +SL
Sbjct: 966 IVCMAQIGSFVPAASVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDILQTITPRSL 1025
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHV 933
V++DELGRGTST+DG+AIAYATL ++ E C LFVTHYP +A D+ + + +H+
Sbjct: 1026 VVLDELGRGTSTYDGIAIAYATLSHIAE-IGCNTLFVTHYPTVAQDLAREKPDKISNWHM 1084
Query: 934 SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
S+ ++ P ++T+LY++ G+ E+SFG A+LA LP + A + ++ L
Sbjct: 1085 SF---DEIQMP---DGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDTAQMRSSSL 1138
Query: 994 EAEVSSRVQNRSAKR 1008
+AE R++ A+R
Sbjct: 1139 KAETQERLRGIVARR 1153
>sp|P0CO93|MSH3_CRYNB DNA mismatch repair protein MSH3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=MSH3 PE=3 SV=1
Length = 1191
Score = 527 bits (1358), Expect = e-148, Method: Compositional matrix adjust.
Identities = 340/975 (34%), Positives = 532/975 (54%), Gaps = 115/975 (11%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTPLE+Q +E+K + DVLL++EVGYK++F GEDA+ A++ LGI A + NF TASIPT
Sbjct: 239 YTPLEKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGIVAFPNRNFFTASIPTH 298
Query: 149 RLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED---- 204
RL++HV++L++ G+KVGV+ QTETAA+K G + PF R L+ L+T AT ED
Sbjct: 299 RLHIHVKKLLSLGYKVGVITQTETAALKKIGDNRNAPFARKLTHLFTAATY--VEDPSLS 356
Query: 205 --------VGGGEDGCGGE----SNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEI 252
V + G +N LV +V+ V + + V++G+V V
Sbjct: 357 SSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQP--VDRASDD------RVKVGLVCVVP 408
Query: 253 STGDVVYGEFNDGFLRSGLEAVLLSLSPAELLL-GQPLSKQTEKMLLAYAGPASN----- 306
TGD+ + EF+D +R+ LE L LSPAELLL Q L+K TEK+L +AG +
Sbjct: 409 GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLTKATEKVLTYFAGEPKHRGRNA 468
Query: 307 VRVE--------------------CASRDCFIGGGALAE----------VMSLYENMGED 336
VR+E C + G + + SL + +D
Sbjct: 469 VRIERIDNIPEYDAAFDFLTNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLSQD 528
Query: 337 TLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRS 396
+ D+ + + + AI +++ P V ++A+ IR++K+FGLE +SF
Sbjct: 529 GADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKHTSSFVR 588
Query: 397 LSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRN 456
+ M LS+NTL LE+ +N ++G YG+L+ +++H T G RLLR WV PL D
Sbjct: 589 FANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLREWVGRPLLDVA 648
Query: 457 LISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQ 516
+ AR DA+ EI E+ SY H EK L S+L ++ PD+
Sbjct: 649 ALKARADAIEEIMEN-NSY--------HMEK--------------LRSLLINM---PDLV 682
Query: 517 RGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTA 576
RG+TR+ + ATP+E ++ ++ + E++ + S LL + T
Sbjct: 683 RGLTRVQYGKATPNELATLLITLV---------RLASEFKPNM-GNVFRSCLLNNIPNTL 732
Query: 577 SSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINM 636
P ++ + + L+ +N + A + D+ NL + +F ++ + + + EL+ +
Sbjct: 733 --PTILDTSQRFLNALNLKQARENDVANLWADPD-RFPDIQDVKDCISVCEMELNEHLME 789
Query: 637 CRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
RK L L +++VSGI +L+E+P VP W K+++T+ RYH+P++L +
Sbjct: 790 LRKILKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKER 849
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFV 754
E+L+IV R A+ +F E Y+ E + +A +DCL +LA + + +P FV
Sbjct: 850 TQHLEKLSIVAREAFIAFQSEVAEYH-ELVVVSKQIAVIDCLMSLAQTAAASGYCKPKFV 908
Query: 755 DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVAL 814
+ E + I +GRHP+++ + +++VP D + E +IITGPNM GKS +R +AL
Sbjct: 909 AEPE---LKILAGRHPMVEMLREESYVPFDIHFSKEEGTTKIITGPNMAGKSSTVRAMAL 965
Query: 815 IGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSL 874
I MAQ+GSFVPA+S L V D + TRMGASD I +G+STF+ EL+E S IL+ T +SL
Sbjct: 966 IVCMAQIGSFVPAASVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDILQTITPRSL 1025
Query: 875 VIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIA-DIKTKFTGSVGTYHV 933
V++DELGRGTST+DG+AIAYATL ++ E C LFVTHYP +A D+ + + +H+
Sbjct: 1026 VVLDELGRGTSTYDGIAIAYATLSHIAE-IGCNTLFVTHYPTVAQDLAREKPDKISNWHM 1084
Query: 934 SYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKL 993
S+ ++ P ++T+LY++ G+ E+SFG A+LA LP + A + ++ L
Sbjct: 1085 SF---DEIQMP---DGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDTAQMRSSSL 1138
Query: 994 EAEVSSRVQNRSAKR 1008
+AE R++ A+R
Sbjct: 1139 KAETQERLRGIVARR 1153
>sp|A4R0R0|MSH3_MAGO7 DNA mismatch repair protein MSH3 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=MSH3 PE=3 SV=1
Length = 1151
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 342/950 (36%), Positives = 519/950 (54%), Gaps = 96/950 (10%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY--------------AH 135
TP+E Q +E+K K+ D +L++EVGYKFRFFGEDA +A K L I AH
Sbjct: 227 TPMELQFLEIKRKHMDTVLIVEVGYKFRFFGEDARIAGKELSIVCIPGKFRYDEHPSEAH 286
Query: 136 LDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYT 195
LD F +ASIP RL VH +RLV AG KVGVV+Q ETAA+K G + PF R L +YT
Sbjct: 287 LD-RFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAALKKAGDNRNAPFVRKLCEVYT 345
Query: 196 KATL--EAAE-DVGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFD--VRLGVV 248
K T E E D G G GG YL+C+ + G G D V +G+V
Sbjct: 346 KGTYIDEMGEMDAQTGASGAHSGG---YLLCLTE---------TAAKGSGTDEKVDVGLV 393
Query: 249 AVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNV- 307
AV+ +TGD++Y F DGF+RS +E LL +SP ELL+ LSK TEK++ +G ASNV
Sbjct: 394 AVQPATGDIIYDSFEDGFMRSEIETRLLHISPCELLIVGQLSKATEKLVKHLSGSASNVF 453
Query: 308 ----RVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMN 363
RVE ++ A + V Y G+ S +D+ + ++ ++N
Sbjct: 454 GDRTRVERVAKGKTTPAEASSHVTKFY--AGKLKGSTQDDRAA---------ALLDKVLN 502
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
+P+ L+ I HL +FGLE I L F+S S M ++ TL+ LEV RN+++ +
Sbjct: 503 LPEPVTLCLSAMITHLTEFGLEHIFDLTKYFQSFSTRSHMCINGTTLESLEVYRNSTDHT 562
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
E G+LL ++ T T +G R+LR+W+ PL D+ + R+ AV E+ E
Sbjct: 563 EKGSLLWALDKTRTRFGQRMLRKWLGRPLLDKERLDDRVAAVEELFE------------- 609
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAG 543
N + VE + +LSS+ T D++R + RIF+ T E +AV+Q
Sbjct: 610 ----NRNGPQVE-KLQKLLSSIKT------DLERSLIRIFYGRCTRPELLAVLQT----- 653
Query: 544 KQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLL 603
LQ++ ++ ++ + S L+ + AS P + L+ +N +AA + D
Sbjct: 654 --LQRIAVEYIVVKEPSQTGFKSNLVSEAL--ASLPRIREIVVSYLNRINPDAARKNDKY 709
Query: 604 NLM-----IISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRN-LEFMSVSGITHL 657
+ E+ + ++ + ++ELD+ + LG + +++++V+GI +L
Sbjct: 710 EFFRDESDDTGDDGEDEITTQKMSIAAVEQELDAHRSDAAATLGRKKAVDYVTVAGIEYL 769
Query: 658 IELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE 715
IE+P KVP +WAK++ TKK R+H+PEV+ + + E L C AA+ + L
Sbjct: 770 IEVPNTEIRKVPASWAKISGTKKLSRFHTPEVVRLIAERDQHKEALAAACDAAFKAMLAS 829
Query: 716 FGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTI 775
Y + AV +LA LDCL + A ++ + +P+ + D P I + GRHP+ +
Sbjct: 830 IADQYQPLRDAVSSLATLDCLLSFAQVAALPGYSKPIILPDSHPPTIAVAGGRHPIAEHT 889
Query: 776 LLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVL 835
L ++P T L + ++TGPNMGGKS ++R +AL+ ++AQVGSFVPA S L +
Sbjct: 890 LPSGYIPFSTTLSSPAPLAHLVTGPNMGGKSSFVRALALLVLLAQVGSFVPADSLRLTLS 949
Query: 836 DGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYA 895
D IYTRMGASD++ G STF+ E+ E + ILR T +SLV++DELGRGTSTHDG AIA+A
Sbjct: 950 DAIYTRMGASDNLFAGESTFMVEVGETAAILRTATPRSLVLLDELGRGTSTHDGAAIAHA 1009
Query: 896 TLDYLLEHKKCMVLFVTHYPKIADIKTKF-TGSVGTYHVSYLTSHKVMGPMDSKSD---- 950
LD+++ + +C+ LF+THY +A + TG V H+ + +S D D
Sbjct: 1010 VLDHVVRNTRCLTLFITHYQSLARVAEGLGTGLVRNVHMRFTSSRDDNDDGDKDQDDDVG 1069
Query: 951 QDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSR 1000
+++T+LY+V GV+ S+G VA+LA++P + A + K+E +V +R
Sbjct: 1070 ENITFLYEVADGVAHRSYGLNVARLARIPRKILEVAARKSRKMEEDVRTR 1119
>sp|P26359|MSH3_SCHPO DNA mismatch repair protein msh3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=msh3 PE=3 SV=1
Length = 993
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 305/970 (31%), Positives = 494/970 (50%), Gaps = 135/970 (13%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S T +TPLEQQ +ELK Y + +L IEVGYKFRFFG+DA++A++VLGI + +HN
Sbjct: 94 SKPTKQKSVFTPLEQQYLELKKNYQETILAIEVGYKFRFFGKDAKIASEVLGISCYFEHN 153
Query: 140 FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATL 199
F+ AS+P++R++ H+ RL+N G KV VV+QTETAA+K+ + F R ++ + TK T
Sbjct: 154 FLNASVPSYRIDYHLERLINFGLKVAVVRQTETAALKSTSSSRNTLFDRRVARVLTKGTT 213
Query: 200 --EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDV 257
++ + G S +++CV D+ + K ++G V++G++A+++S+G
Sbjct: 214 LDDSFFRFEQTQHGTLQASQFILCVADN-VDKSKAKSG------RVQVGLIAIQLSSGTT 266
Query: 258 VYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASN----VRVECA- 312
VY F D FLRS L+ L P EL+ LS ++ +L Y VRV+ A
Sbjct: 267 VYDHFQDDFLRSELQTRLSHFQPCELIYSNKLSSESVALLNHYVSTEKTCGRVVRVQHAV 326
Query: 313 ---------------SRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSA 357
S C + G + E+
Sbjct: 327 QQDVKLALENLQDFFSSKCIMSGSKIIEL------------------------------H 356
Query: 358 IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLR 417
+E + ++ L++ L + I +L +F LE + ++ M LS L+ LE+
Sbjct: 357 MEKVKSLHSLSIICLDMAISYLMEFSLEDLFVASNFYQPFDSISSMVLSKQALEGLELFV 416
Query: 418 NNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRT 477
N ++ + G+L +++ T T +G R+L+RW+ PL D+ I RLDAV E+A +
Sbjct: 417 NQTDHTPVGSLFWVLDRTYTRFGQRMLQRWLQKPLVDKENIIERLDAVEELAFN------ 470
Query: 478 SESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ 537
NS V + Y R PD+++G++RI+++ F
Sbjct: 471 ---------SNSQVQAIRKMLY-----------RLPDLEKGLSRIYYQRG----FYKAAS 506
Query: 538 AILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA 597
A K + SALL+RLI P++ L +++ A
Sbjct: 507 AF-----------------SKNSYSCFKSALLRRLI--QQLPSISSIIDHFLGMFDQKEA 547
Query: 598 DQGDLLNLMI-ISNGQFSE------------VARARKAVQSAKEELDSLINMCRKQLGMR 644
+ + +++ I N SE + + ++ + E+D + R L
Sbjct: 548 ENNNKVDMFKDIDNFDLSEEPNDVDYELAQEIRELKMSILMVRTEMDFHLQELRDYLEYP 607
Query: 645 NLEFMSVSGITHLIELPANFK-VPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTI 703
NLEF + IE+ K +P +W K++ST+ R+H+P++ + L +L+ E LTI
Sbjct: 608 NLEFSIWGNVKFCIEVSKGCKKIPPDWIKLSSTRSLFRFHTPKIQSLLIELSSHEENLTI 667
Query: 704 VCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIH 763
+ SFL +Y E + L LDCL + A +S + RP F D ++
Sbjct: 668 SSEKIYRSFLSRISEHYNELRNVTTVLGTLDCLISFARISSQSGYTRPEFSDK----ELL 723
Query: 764 ICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGS 823
I RHP+++ + +FVPN +L ++ C +ITGPNMGGKS +++Q+AL IMAQ G
Sbjct: 724 IHESRHPMIELLSDKSFVPNHIHLSSDGVRCLLITGPNMGGKSSFVKQLALSAIMAQSGC 783
Query: 824 FVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRG 883
FVPA SA L + D I RMG+SD++ STF+ E+ E +L T +S+VI+DELGRG
Sbjct: 784 FVPAKSALLPIFDSILIRMGSSDNLSVNMSTFMVEMLETKEVLSKATEKSMVIIDELGRG 843
Query: 884 TSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMG 943
TST DG AI+YA L YL ++ K +LFVTH+P + ++ +F G + +H+ YL S +
Sbjct: 844 TSTIDGEAISYAVLHYLNQYIKSYLLFVTHFPSLGILERRFEGQLRCFHMGYLKSKE--- 900
Query: 944 PMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
++ Q +++LYK+VPGV+ S+G VA++A +P S +SRAT I+ E ++
Sbjct: 901 DFETSVSQSISFLYKLVPGVASKSYGLNVARMAGIPFSILSRATEISENYEK------KH 954
Query: 1004 RSAKRDLLVK 1013
R+A++++ ++
Sbjct: 955 RNARKNVFIR 964
>sp|Q4P6I8|MSH3_USTMA DNA mismatch repair protein MSH3 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=MSH3 PE=3 SV=1
Length = 1154
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 327/977 (33%), Positives = 512/977 (52%), Gaps = 109/977 (11%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
KT KPK S P YTPLE+Q++ELK ++P VLL+IEVGYK +F+G
Sbjct: 218 KTKGKPKASGAGTGP------------SYTPLEKQILELKAEHPGVLLIIEVGYKLKFYG 265
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGP 180
EDA +A+K L I + N +TA IP RL++HV+RL+ AG KVGVV+Q ET A+KA
Sbjct: 266 EDARIASKELSIMCFPERNLLTAMIPVHRLHIHVKRLIQAGHKVGVVRQIETRALKAASK 325
Query: 181 GKAGPFGRGLSALYTKAT----LEAAEDVGGGE-DGCGGESNYLVCVVD--DDGNVGKIR 233
PF R L+ALYT +T L + +D+ D + L+ +V+ + GN R
Sbjct: 326 NAYTPFVRKLTALYTASTWVDDLSSLDDLAANMGDAYTNQPKSLMAIVEQSERGNAQADR 385
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQT 293
V +G+V+VE++TG + Y +F+DG RS LE + L+PAE+L+ L+K T
Sbjct: 386 ---------VSIGIVSVEVNTGHLTYDQFSDGHARSELETRIAHLAPAEVLIPPQLTKPT 436
Query: 294 EKML--LAYAGPASNVRVE--CASRDCFIGGGALAEVMSLYENMGEDTL----------S 339
EK++ L G VR+E A D A V Y + G ++ S
Sbjct: 437 EKVISYLLGNGADGGVRIERLAAMPDY---NQAFQSVTRFYRDRGLESPEVPEVPEVPGS 493
Query: 340 NNEDQN---MDVPEQGNHRSA--IEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
+ D + + + RS+ I I+++P L++ ALA I+HL+ F LE I L +F
Sbjct: 494 SEADTTRLATTLADGADKRSSPLISLIVSLPQLSLIALAQIIQHLQAFQLESICTLSTNF 553
Query: 395 RSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCD 454
RS S M L++NTL LE+ R + +E G+L+ +++ + G RLLR+WV+ PL D
Sbjct: 554 RSFSSRTTMLLNSNTLANLEIFRTANEQTERGSLIWLLDKCKSAMGRRLLRKWVSRPLTD 613
Query: 455 RNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPD 514
+ + RLDAV + D K+ Y+L + + L PD
Sbjct: 614 IDKLQERLDAVEAL---------------RDGKS-----------YVLRRLDSVLHGLPD 647
Query: 515 IQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLIL 574
++RG+ R+ + ATP+E V+ L + Q+ D E T KT S + L+
Sbjct: 648 LERGLARMTYGRATPTELATVL---LSLNRVTQEFKAD----EAATWKTQSSLIDTHLLS 700
Query: 575 TASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLI 634
AS V+ +S A ++ DL + F + ++ + EL +
Sbjct: 701 LASGKQVVQTYLNQISIKEARANNKADLY----LDADVFPAIQASKDNMAIIDGELREHL 756
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPA--NFKVPLNWAKVNSTKKTIRYHSPEVLTALD 692
RK L +L+++SV+G+ +L+E+ KVP+ W +V++TK +R+H+PEV+
Sbjct: 757 REIRKLLHRPSLDYVSVAGVDYLVEVRVADAKKVPVEWLRVSATKSMVRFHTPEVMRLSK 816
Query: 693 QLALANEELTIVCRAAWDSFLKEF-GGYYAEFQAAVQALAALDCLHALATLSRNKNFVRP 751
E L + A+ F++E Y + V +LA LD L +LA ++R + RP
Sbjct: 817 IRDQHKETLDAAAQEAFARFVRELCKSEYVVLRNVVASLAVLDVLLSLAHVARAAGYTRP 876
Query: 752 VFV----DDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQI-ITGPNMGGKS 806
VF+ D V + I RH +L+ + ++PND +L I ++G NMGGKS
Sbjct: 877 VFLRQPQDAEASVPVEIIGMRHAILEVVSAMPYIPNDVSLSTGDSGAAILLSGCNMGGKS 936
Query: 807 CYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYIL 866
+R + L+ IMAQ+GSFV A A + V D +Y RMGA D + GRST++ E++E + IL
Sbjct: 937 SVVRALGLVIIMAQIGSFVAADVARIGVHDAVYVRMGARDRMFSGRSTYMVEVSETADIL 996
Query: 867 RNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVLFVTHYPKIADIKTKF 924
+ T++S+VI+DELGRGTS+ DG +A L+YLL C +F+THY ++A ++ ++
Sbjct: 997 GSLTSRSMVILDELGRGTSSRDGYCLAAGVLEYLLT-LGCPPNTVFITHYLQLASMQRRY 1055
Query: 925 TGSVGTYHVSYLT-SHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCI 983
+ H+++ + S ++ P + +YK+ PG++ SFG A LA+LP I
Sbjct: 1056 P-HLRNMHMAFTSNSRNLLDP--------IHLVYKLRPGIAH-SFGIHAAHLARLPLQII 1105
Query: 984 SRATVIAAKLEAEVSSR 1000
A+ I++ L A+ ++R
Sbjct: 1106 HSASTISSALYAKHTNR 1122
>sp|Q6BW83|MSH3_DEBHA DNA mismatch repair protein MSH3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=MSH3 PE=3 SV=2
Length = 1028
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 316/993 (31%), Positives = 513/993 (51%), Gaps = 134/993 (13%)
Query: 59 PPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRF 118
P KKP+ S P S +++KK TPLE+Q VE+K D +L I+VGYKF+F
Sbjct: 84 PEPVKKKPRTSQSLSRSKSKPQSVGSNSKKLTPLEKQFVEMKQSNLDKILAIQVGYKFKF 143
Query: 119 FGEDAEMAAKVLGI-----------YAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVV 167
FGEDA +A+K+L I Y H F SIP RL++H++RL+N G KVGV
Sbjct: 144 FGEDAVIASKILSIMLIPGNIKLDEYQH--DRFAYCSIPDNRLHIHLKRLLNQGLKVGVA 201
Query: 168 KQTETAAIKA-HGPGKAGPFGRGLSALYTKATLEAAEDVGGG---------EDGCGGESN 217
KQTETAAIK+ K+G F R ++ +YTKAT E + G +D G +
Sbjct: 202 KQTETAAIKSIDSTNKSGLFEREITGVYTKATYMGDELLTGDPNINRTSITDDEMG---D 258
Query: 218 YLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLS 277
Y+ C+ D+ + I G++A++ TGD++Y FND R LE L+
Sbjct: 259 YIFCI--DESHSKDI-------------GMIAIQPITGDIIYDTFNDNVTRDELETRLVY 303
Query: 278 LSPAELLL---GQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMG 334
L+P+E+L+ +SK+T KM+ N +V R E+ + + +
Sbjct: 304 LNPSEILVINNSTEISKETIKMI-----NIVNNKVNIIHRPRRQQTDYTNEIYNFFNTID 358
Query: 335 EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASF 394
E + G H ++ P+ + I++L++F L I + ++
Sbjct: 359 EGKYK----------DLGEHY-----LLKFPNNIQSCMIELIKYLEEFKLSNIFTIISNV 403
Query: 395 RSLSGSME-MTLSANTLQQLEVLRNNSN-GSEYGTLLHIMNHTLTIYGSRLLRRWVTHPL 452
S S + L ++T+Q LE+ +N ++ S G+L+ ++NHT T G+RLL +W++ PL
Sbjct: 404 SCFSNSKTCLVLPSSTVQALEIFQNMTDPNSNKGSLIWLLNHTRTRMGNRLLVKWISKPL 463
Query: 453 CDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGR- 511
D+ I RL + D+T F L + L +G+
Sbjct: 464 IDKAQIEERLQGIE-----------------------DLTFKFNHFIDSLKNQLDKIGKA 500
Query: 512 SPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS--KTLHSALL 569
S D+++ + ++ + + + I+ + L L + ++ + + +++HS LL
Sbjct: 501 SIDLEKNLIKVHYSSTYQLDKISRKEVYLLLKCFDDILSMIKQFGKPTNNILESIHSPLL 560
Query: 570 KRLILTASSPAVIGKAAKLLSTVNKEAADQGDL-------LNL------MIISNGQFSEV 616
R+ A LL ++ +A D +L NL IIS Q SE+
Sbjct: 561 LRIFDELMQLAKEDTVRCLLDMISADALDDSNLNDQKIKFFNLNYFKDQQIIS--QLSEI 618
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKV---PLNWAKV 673
+ + D LI + RK L L +++ S T+L+E+ V P +W K+
Sbjct: 619 SNVESLLN------DELIEI-RKMLKRPQLNYITSSKETYLVEVRNGKMVDSLPKDWIKI 671
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
N TK R+ SPE+ QL N+ L C A++++L + Y F ++ L+
Sbjct: 672 NGTKTVSRFRSPEITRLHKQLQYHNDMLIRNCDKAFNAYLFKIDNNYEFFSKIIRNLSTF 731
Query: 734 DCLHALATLSR-NKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD--NFVPNDTNLHAE 790
DCL +L+ +S N N+ RP V+D + +Q+ + R+P+++ + ++ N++ ND N+ +
Sbjct: 732 DCLLSLSAVSSINSNYARPKIVEDKQIIQMK--NSRNPIIENLSVNYSNYISNDINISYD 789
Query: 791 REYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQ 850
+ IITGPNMGGKS Y++QVAL+ IMAQ+GS++P A + + D I+ RMGA D+I Q
Sbjct: 790 EDRVLIITGPNMGGKSTYVKQVALLVIMAQIGSYIPCDEATVGIFDSIFIRMGARDNILQ 849
Query: 851 GRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVL 909
+STF+ E+ E S+IL+N T+ SL+I+DE+GRGT T+DG+AIAY+ L+YL+E +K + L
Sbjct: 850 NQSTFMIEMLECSHILKNMTSNSLIILDEIGRGTGTNDGIAIAYSILNYLIEEPRKPLTL 909
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ---DVTYLYKVVPGVSES 966
F+TH+P + ++ KF G YH+ + H+V SKS+Q +V +LY +V GV +
Sbjct: 910 FITHFPSLHVLEDKFKGIATNYHMGF---HEV-----SKSNQEFPEVVFLYNLVRGVVGN 961
Query: 967 SFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
S+G VA+LA +P S I+ A + ++ + S
Sbjct: 962 SYGLNVAKLAGIPNSIINNAYTKSTEIRDAIES 994
>sp|A5DEV6|MSH3_PICGU DNA mismatch repair protein MSH3 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=MSH3 PE=3 SV=2
Length = 960
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 305/970 (31%), Positives = 491/970 (50%), Gaps = 137/970 (14%)
Query: 59 PPKTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRF 118
PP K SP T+ I ++ T KK TPL+QQ ++LK +YPD +L I+VGYK++F
Sbjct: 65 PPSIASSIKKSPKTV--IGKHANSTKKPKKRTPLDQQFIDLKNEYPDCVLAIQVGYKYKF 122
Query: 119 FGEDAEMAAKVLGIY--------AHLDHN-FMTASIPTFRLNVHVRRLVNAGFKVGVVKQ 169
FG DA +++L I H+ F S+P RL++H++RL+ G KV VV Q
Sbjct: 123 FGVDAVPVSRILNIMFIPGNLTERDATHDKFAYCSVPDNRLHIHLQRLLTNGLKVAVVSQ 182
Query: 170 TETAAIKAHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNV 229
TE+A ++ K G F R ++A+YTKAT E+G G +++ C+
Sbjct: 183 TESAVLREAESSK-GLFLREVTAIYTKATY--------IEEGSG---DFISCIT------ 224
Query: 230 GKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLR--SGLEAVLLSLSPAELLL-G 286
NG G V V+ TG+++ +F++ S L+ L L P+E+++
Sbjct: 225 ---WNGTSA-------GAVTVQPCTGEIIVEDFSEKEPEALSELQTYLHHLRPSEIIVTD 274
Query: 287 QPLSKQTEKM--LLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQ 344
+K+ +K+ LL G A I EV S E + +++N
Sbjct: 275 NEATKENDKLSRLLKSFGGAR------------ISYKPFDEV-SPIEELLPASIANY--- 318
Query: 345 NMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT 404
+ N Q ++ I +LK F L++I + ++ S M M
Sbjct: 319 ---------------YVTNHSTTTTQCISQLITYLKDFSLDQIFTVPSNVSKFSTKMYMN 363
Query: 405 LSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDA 464
L NTL+ LE+ +N+S G+E GTL ++HT T G R+L++WV+ PL D I RLDA
Sbjct: 364 LPGNTLKALEIFQNSS-GTEKGTLFWHLDHTHTKMGRRMLQKWVSKPLIDNASIQERLDA 422
Query: 465 VSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRS-PDIQRGITRIF 523
+ ES+ +Y N V + E ++ +GR D ++ + +I
Sbjct: 423 I----ESLMNY------------NYAVEVFE--------GIIKKIGRDESDWEKSMIKI- 457
Query: 524 HRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK-----TLHSALLKRLILTASS 578
H TA S+ + ++ Q + + ID Y+ K + K L ++ L AS+
Sbjct: 458 HYTANGSQNRVTRKEVVQLLLQFRSV-IDTVYKFKSSFKDSSISKLLQSMFSELAELAST 516
Query: 579 PAV--IGKAAKLLSTVNKEAADQG-DLLNL-MIISNGQFSEVARARKAVQSAKEELDSLI 634
P V + K+ + +E DQ + +L G SE+ + Q+ ++EL +
Sbjct: 517 PIVNDLLSRVKIEAVYREEVEDQKKEFFDLDSHPHEGIKSELNAISELEQALQDELVEI- 575
Query: 635 NMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQL 694
K++ + +++M+VS +LI L + P +W K+++TK RY P+V +L
Sbjct: 576 ----KKIIKKPVDYMTVSREPYLIALRGD-SGPQDWLKISATKTVTRYRPPKVSKLYKEL 630
Query: 695 ALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHAL-ATLSRNKNFVRPVF 753
E+L C A+ +FLK+ +Y F ++ +A +DCL +L AT S N + +P+
Sbjct: 631 LYHQEKLIQQCDEAFATFLKDIDSHYTYFSRLIKIVAEIDCLLSLKATSSSNSGYSKPIL 690
Query: 754 VDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQV 812
D I R+PV++ + +V ND + + IITGPNMGGKS Y++QV
Sbjct: 691 SDKQ---MIKAKRSRNPVIENLTSTSQYVANDIEISYDENRVLIITGPNMGGKSSYVKQV 747
Query: 813 ALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQ 872
ALI +M Q+G ++P SA + + D I RMGA D+I +G STF+ E++E S I+++ T +
Sbjct: 748 ALIALMTQIGCYLPCESAIVGIFDTILVRMGAEDNILKGESTFMVEMSECSTIIKSLTNK 807
Query: 873 SLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTY 931
SLVI+DE+GRGT T DG+AIAY+ + YL+E + + LF+THYP + ++ +V Y
Sbjct: 808 SLVILDEIGRGTGTEDGIAIAYSIISYLIEEPRLPLTLFITHYPSLKVLEDTHPKNVANY 867
Query: 932 HVSYLTSHKVMGPMD-SKSDQ---DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRAT 987
H MG M+ +K+DQ DVT+LY + GV +S+G VA+LA +P I++A
Sbjct: 868 H---------MGFMEVAKADQEWPDVTFLYTLKRGVVSNSYGLNVARLAGIPSEIITKAF 918
Query: 988 VIAAKLEAEV 997
+A L+ ++
Sbjct: 919 KVAEALKQDI 928
>sp|Q6CSR1|MSH3_KLULA DNA mismatch repair protein MSH3 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=MSH3 PE=3 SV=1
Length = 1029
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 276/945 (29%), Positives = 477/945 (50%), Gaps = 117/945 (12%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHN 139
+NKK T L+QQ ELK K+ D +L + VGYK++FF +DAE+ + +L I LD +
Sbjct: 145 NNKKLTELDQQFKELKLKHMDTILCVRVGYKYKFFAKDAEIVSNILQIKLVPGKKTLDES 204
Query: 140 ---------FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGL 190
F SIP RL+VH++RLV +KV VV+QTET+A+K + F R +
Sbjct: 205 DPNDRNYRKFQYCSIPDTRLHVHLQRLVFFNYKVAVVEQTETSALKKNN-NSGSLFTREI 263
Query: 191 SALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAV 250
++TK + E ED G+ + + ++ K+R ++ +++V
Sbjct: 264 KNIFTKVSYGINETFDKSEDRILGDLTSVWAISINE--TSKMR----------KVNLISV 311
Query: 251 EISTGDVVYGEFNDGFLRS-GLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRV 309
++++G++V+ +F+D L + LEA + L+P E++ + L P S
Sbjct: 312 QLNSGEIVHDQFSDDILLNVNLEARIRYLNPTEIITEEEL-------------PPS---- 354
Query: 310 ECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAV 369
R F L + + Y++ E N A++G +++ +
Sbjct: 355 ---IRTIF---TKLNQDIQFYQSHKEAC--------------PNLFDALQG-LDLNNELK 393
Query: 370 QALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLL 429
+ L++ +L F +++ +++ S + M L NT++ LE+ N++ G+LL
Sbjct: 394 RLLSVLHSYLSTFENTKVLYFASNYSSFTAKNFMVLPRNTIESLEIFENSTTNKTNGSLL 453
Query: 430 HIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNS 489
+M+HT T +G RLLR+W++ PL D I R DA++ I + + S
Sbjct: 454 WVMDHTRTQFGYRLLRKWISKPLIDLKSILDRQDAITCIMKEVHSI-------------- 499
Query: 490 DVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL 549
S L +S D++R + RI + + + E ++ I +
Sbjct: 500 -----------FFESFNELLRKSIDLERALNRIAYGSTSRKEVYFFLKQIATFASLFKSH 548
Query: 550 H--IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LL 603
H I + ++ ++ S LL ++ + L +N +AA D ++
Sbjct: 549 HTFIHDQLHKENSALRKTSCLLFNILQNLDAFFSATDLPLFLQMINVDAALDKDSHKNVI 608
Query: 604 NLMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPA 662
++ F E + + ++ K ELD + ++ L L + +LIE+
Sbjct: 609 EFFNLNKYDFPEGLLHKYRDIEEVKTELDDELQNIKRVLKRPTLSYKDTKD--YLIEVRN 666
Query: 663 N--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYY 720
VP NW KVNSTK R+ +P+ + +L N+ L ++ + FL+ Y
Sbjct: 667 TQAKTVPSNWVKVNSTKAVSRFRTPKTEELVGKLLYHNDLLNLLAEDEFKRFLQRIVDRY 726
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
AE + + LA DC+ +LA S N N+V+P + H+ V++ +GR+P+++++ + N+
Sbjct: 727 AEIKTCINNLATYDCILSLAATSSNVNYVKPKLTELHQKVKVK--NGRNPIIESLDV-NY 783
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPND + + IITGPNMGGKS YIRQVAL+ IM Q+G ++PA SAE+ + D I+T
Sbjct: 784 VPNDVLMSSNSGKINIITGPNMGGKSSYIRQVALLVIMTQIGCYIPADSAEMSICDRIFT 843
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+G+ D + +STF E++E +IL + T +SL+++DE+GRGT THDG++I++A L+Y
Sbjct: 844 RIGSHDDLLNAKSTFQVEMSEVLHILNSSTPRSLLLLDEVGRGTGTHDGLSISFAILNYF 903
Query: 901 --LEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
L +VLF+THY + I +K + YH+SY+ H+ P + + +V +LYK
Sbjct: 904 VYLADNCPLVLFITHYSALCQIDSKL---IANYHMSYIEKHQ---PGEKWT--NVIFLYK 955
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQN 1003
+V G + +S+GF VA+L+ +P I+RA ++ E +SS+ N
Sbjct: 956 LVLGQAHNSYGFNVAKLSNIPTEIINRAFEVSE--EKILSSKHHN 998
>sp|A3LU10|MSH3_PICST DNA mismatch repair protein MSH3 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=MSH3 PE=3 SV=3
Length = 1025
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 311/1066 (29%), Positives = 512/1066 (48%), Gaps = 154/1066 (14%)
Query: 3 KQKQQVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFS-PAKRKVVSSLFPPK 61
+ KQ ISRFF ++T S++++ P Q P K + FS K VV +
Sbjct: 4 RSKQASISRFF-----KSTKSNNSAKNEPAVQHIPKKTGVMLKFSYNNKENVVEGGKDTE 58
Query: 62 TPK------------------------------KPKLSPHTLNPIPTPSSQTTHNKK--- 88
P PK+S L P Q KK
Sbjct: 59 GPHIVGSHVELPGQSVNSVVNSDSIVVNSNLEIDPKISS-VLKRKPDIDIQLKTTKKRSK 117
Query: 89 -YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGI-YAH-----LDHNFM 141
TPLE+Q+ EL+ + D +L+I++GYK++ FG+DA++ +K+L I Y F
Sbjct: 118 TLTPLEKQIRELRESHKDKVLVIQIGYKYKMFGDDAKLGSKILDIMYIRGGDDGTRDEFS 177
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA--HGPGKAGPFGRGLSALYTKATL 199
S P F+L+++++RL+ G K+GVVKQ E+A +K + R ++ +YT+ T
Sbjct: 178 YCSFPDFKLHINLKRLLTHGLKIGVVKQLESAIVKTVEKSSKSSDLMKREITGVYTRGTY 237
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVY 259
E V + ES Y + +++ L +VAV+ TGD+V
Sbjct: 238 MGDEYVQSSGNSADTESPYYIICINEINQK--------------ELSMVAVQPKTGDIVQ 283
Query: 260 GEFNDGFLRSGLEAVLLSLSPAELLL---GQPLSKQTEKMLLAYAGPASNVRVECASRDC 316
F DG R LE L+ L+P+E+++ QP + + + L AS+V++ R
Sbjct: 284 DTFKDGLNRDELETRLMYLNPSEVIVLSSEQPSVETLKTIRLV----ASDVQLLPRKRK- 338
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGI-MNMPDLAVQALALT 375
GED + N + D + G ++ + +N
Sbjct: 339 -----------------GEDEVFNGLIEFFDSIDNGKYKHLGDYFSVNFSKHIQSCFYEL 381
Query: 376 IRHLKQFGLERIMCLGASFRSLSGSME-MTLSANTLQQLEVLRNNSN-GSEYGTLLHIMN 433
I +L +F L + + + + + S + M L NTL LE+ +N +N S+ GTL+ ++N
Sbjct: 382 INYLSEFKLSNVFTIPDNISNFTNSRKYMVLPNNTLYALEIFQNYTNPASQKGTLIWLLN 441
Query: 434 HTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTI 493
HT T +G+RLL +WV+ PL ++ I RL A+ ++ G + N+ V
Sbjct: 442 HTRTRFGNRLLNKWVSKPLIEKEKIEERLLAIEDLT---GDF------------NNVVDA 486
Query: 494 VEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ--LHI 551
++ Q L +G+S D++ + + H AT + + + +Y Q L
Sbjct: 487 LKIQ--------LDKMGKSLDLEELLMKT-HYAATYN-LDKINRRDIYNMLDCFQSVLES 536
Query: 552 DGEYREKVT--SKTLHSALLKRLILTASSPAVIGKAAKLLSTVNK-----EAAD-QGDLL 603
+ + +T SKT S LL ++L S + + LL+ +N+ E+ D + +
Sbjct: 537 MNRFEKGITEFSKTKKSPLLTNILLELSEMSKTTVVSNLLNKINRSYVMNESKDPEEQVT 596
Query: 604 NLMIISN-------GQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITH 656
+ N +FSE+ + K + + L+N+ R+ L L++++ + +
Sbjct: 597 QFFNLDNHNWEDIRSEFSELDKIEKLFE------EELLNI-RRVLKRPQLQYITNNKEPY 649
Query: 657 LIELPANFKV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL 713
LIE+ +V P ++ ++N T R+ S + E+L + C A++ FL
Sbjct: 650 LIEVRNGKQVDELPTDFHRINGTTTVSRFRSERTAQLYIKKQYHKEKLLVNCNVAFNDFL 709
Query: 714 KEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD 773
KE Y F V+ L+ DCL +L S RP+ VD I + GR+P+++
Sbjct: 710 KEIDEQYEFFSKIVKNLSVFDCLLSLTAASLASKNTRPILVDQQ---LIEVQKGRNPIIE 766
Query: 774 TILLDN-FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAEL 832
++ N +VPND ++ + + IITGPNMGGKS Y++QVAL+ IM+Q+G ++P A L
Sbjct: 767 SLHNRNDYVPNDIDICYDNKVL-IITGPNMGGKSSYVKQVALLVIMSQIGCYIPCDRATL 825
Query: 833 HVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAI 892
V D I+ RMGASD+I +G STF+ E+ E S I+ + +SLVI+DE+GRGT T DG+A+
Sbjct: 826 GVFDSIFIRMGASDNILKGNSTFMNEMLECSNIIHGISNKSLVILDEIGRGTGTSDGIAL 885
Query: 893 AYATLDYLLEHK-KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQ 951
AY+ L YL+E + +VLF+THYP + ++ F V YH+ + HK D
Sbjct: 886 AYSILRYLIESPLRPLVLFITHYPSLHVLEDSFPTVVTNYHMGFQQIHK-----DDNDFP 940
Query: 952 DVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEV 997
++ +LY +V GV +S+G VA+LA LP S IS A ++ L+ +V
Sbjct: 941 EIIFLYNLVKGVINNSYGLNVAKLAGLPVSVISGAHRVSESLKYKV 986
>sp|A5DYV8|MSH3_LODEL DNA mismatch repair protein MSH3 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=MSH3 PE=3 SV=1
Length = 993
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 310/1066 (29%), Positives = 515/1066 (48%), Gaps = 153/1066 (14%)
Query: 1 MGKQKQQVISRFFAPKSNQTTASSS-----ASSPRPPQQTPPPKIAATVSFSPAKR---- 51
M +KQ IS FF+ ++ ++ + +SSP + I +T SP +
Sbjct: 1 MASKKQSTISLFFSSQTRKSPGRDAKKNDISSSPFNAASSTNNSIGSTPRVSPIAKFQYN 60
Query: 52 KVVSSLFPPKTPKKPKLSPHTLNPIPTPSSQTTHNK-------KYTPLEQQVVELKTKYP 104
K S+L P+ ++S TLN + H K K TPLE Q+++L +++P
Sbjct: 61 KSTSTLHENTNPRVKRVS--TLNV----DVEKEHKKIKRARSTKLTPLESQILQLLSEHP 114
Query: 105 DVLLMIEVGYKFRFFGEDAEMAAKVLGIY---AHLDHNFMTASIPTFRLNVHVRRLVNAG 161
D +L+I+VGYK++ +GEDA A+ L I + D F S P RL+++++R++N G
Sbjct: 115 DKILLIQVGYKYKVYGEDARHVARCLNIMFISSSTDPTFSYCSFPENRLHINLQRILNTG 174
Query: 162 FKVGVVKQTETAAIK-AHGPGKAGPF-GRGLSALYTKATLEAAEDVGGGEDGCGGES-NY 218
KVGVVKQ E+A IK GK+G R L+ +YT+ T E + G + E Y
Sbjct: 175 VKVGVVKQMESAIIKEVDKIGKSGDLMKRELTGVYTRGTYMNDEFIDSGVNSPEQEELGY 234
Query: 219 LVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSL 278
+VCV +I F +VA++ TG+++Y +F D LE LL L
Sbjct: 235 IVCV-------NEISRYQFA--------IVAIQPLTGEIIYDDFTDDVSHDELETRLLYL 279
Query: 279 SPAE-LLLG--------QPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSL 329
P+E LLLG + G ++ + + ++ CF
Sbjct: 280 RPSEVLLLGCGGNESNNNNNNNSNNSSNNNDNGTDADAQNQTSTLQCF------------ 327
Query: 330 YENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDL--------AVQ-ALALTIRHLK 380
L N N+ + + + ++ ++N L VQ ++ +++L+
Sbjct: 328 ------QKLVN---HNIKIERKPKGLNNLKAVLNAAALNFYRELLEPVQVCVSELVKYLE 378
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+F L I + + M L A+T+ LE+ +N+ N + GTL ++NHT T +G
Sbjct: 379 EFNLSNIFTVIENVSKFDSKKTMILPASTMLSLEIFQNSENSTTKGTLFSLLNHTKTPFG 438
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL WV+HPL D++ I R AV ++ S G H F
Sbjct: 439 MRLLESWVSHPLIDKDKIEERYQAVEDL-----------STGSH-------------FND 474
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQ--LHIDGEYREK 558
LS +L +G++ D++ +I + T T S + + ++ + Q L ++ +
Sbjct: 475 CLSRLLQKIGKNLDLESIAIKIHYSTTTRSLATKINRKDIFMMLLMYQSALQFVSQFEKT 534
Query: 559 VTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE--AADQGDL-----------LNL 605
+ + L S LLKR++ A + + +N +Q +L +
Sbjct: 535 IKASNL-SPLLKRVLDNLLQLANTDTVDRFMDMINPSYLLGEQQNLHQSSRSTREQKVKF 593
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL---PA 662
++NG F E+ R + + K L+ + +K L L +++ +G +LIE+ A
Sbjct: 594 FNLNNG-FEEINRELAEIMNVKMLLEEELVKVKKLLQRPQLNYVTSNGEPYLIEVRNGKA 652
Query: 663 NFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAE 722
+P+++ K+N T R+ S E+ E L C A+++FL E +Y
Sbjct: 653 VESLPIDFIKINGTTTVSRFRSKEIAHLYKMKQYHEEVLNNRCDEAFNTFLNELDSHYGF 712
Query: 723 FQAAVQALAALDCLHALATLSR-NKN-FVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
FQ + LA LDCL +LA +S N N V+P D+ + I + + RHP+++ L D +
Sbjct: 713 FQGITKNLAVLDCLLSLAAVSNSNSNTHVKPNLSDE---LIIDVKNARHPIIEH-LRDGY 768
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
V ND ++ + +ITGPNMGGKS Y++ VAL+ IM Q+G ++P +A + + D I
Sbjct: 769 VANDIDIRYDSNRVLVITGPNMGGKSSYVKMVALLIIMTQIGCYIPCEAATIGIFDSILI 828
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
RMGASD++ +GRSTF+ E+ E S I++ T +SLVI+DE+GRGT + DG ++AYA L YL
Sbjct: 829 RMGASDNLLKGRSTFMTEMLECSNIIQKLTPRSLVILDEIGRGTGSIDGYSLAYAILRYL 888
Query: 901 LEHK-KCMVLFVTHYP------------KIADIKTKFTGS--VGTYHVSYLTSHKVMGPM 945
+E K K +VL +THY K A + TG V +Y++ Y ++ P
Sbjct: 889 VESKLKPIVLCITHYTGLLSETEDEKFDKDAKDENLDTGDDVVKSYYMGY---EEITQP- 944
Query: 946 DSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAA 991
+ ++ +LY + PGVS +S+G +VA++A LP + A ++++
Sbjct: 945 -GQVFPEIVFLYNLCPGVS-NSYGLQVAKMAGLPKKVLLEAYLMSS 988
>sp|Q759V4|MSH3_ASHGO DNA mismatch repair protein MSH3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MSH3
PE=3 SV=1
Length = 1032
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 279/960 (29%), Positives = 473/960 (49%), Gaps = 138/960 (14%)
Query: 79 PSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA---- 134
P S+ + T L+QQ +LK ++ D +L + VGYK++FF EDA M ++VL I
Sbjct: 130 PRSKRAKPNRLTELDQQFKDLKLQHMDKVLAVRVGYKYKFFAEDAVMVSRVLQIKLVPGK 189
Query: 135 ----------HLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
H F +IP RL VH++RL++ KVGVV+QTET+A+K + +
Sbjct: 190 LTVHETDPADHKHKKFAYCTIPDTRLEVHLQRLMHHNLKVGVVEQTETSAVKKNSGTSSS 249
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNY---LVCVVDDDGNVGKIRNGVFGDGF 241
F R ++ ++T+AT E G + G+S LVC R +
Sbjct: 250 VFSREVTNIFTRATYGINETFGTKDRRVLGDSASVWGLVCK----------RQPSY---- 295
Query: 242 DVRLGVVAVEISTGDVVYGEFNDG-FLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY 300
R +V+V +++G+V++ +F + FL LE + +P+E+++G L + EK+
Sbjct: 296 -TRYFLVSVNLNSGEVIFDDFKEERFLTEALETRIKYTNPSEVVVGDGLGSEIEKVFHTS 354
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
+ R+E ++ LYE + + A +G
Sbjct: 355 DSDITLNRIE---------------LVGLYEEIFSEP-----------------HPAFKG 382
Query: 361 IMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNS 420
N+P AL L +L F E ++ +F+ M L ++ ++ L++ N++
Sbjct: 383 --NVP--LQTALMLVHGYLTNFKNESLLFFKENFKPFCSKTHMILPSSAIESLDIFENST 438
Query: 421 NGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSES 480
+ S G+LL +++HT T YG R L+ W+ PL + + I RLDAV I+ +G+
Sbjct: 439 DRSSKGSLLWVLDHTRTNYGLRNLKNWIAKPLINIDQIQQRLDAVQCISTEVGNI----- 493
Query: 481 VGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQ--- 537
+ S+ L D++R + RI + + E ++
Sbjct: 494 --------------------FIESLNNMLRDGQDLERILNRIAYGKTSRREVYLFLRELT 533
Query: 538 --AILYAGK----QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLST 591
A L++ + L +G+ R + S+LL + L+
Sbjct: 534 QLATLFSSHHRYIETNVLSANGKIR-------MQSSLLANIFTDLDEYWKQFPIPNFLAM 586
Query: 592 VNKEAA-DQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFM- 649
+N +AA D+ + + ++ RA + S +++++++I R +L +N+ +
Sbjct: 587 INIDAALDKNP--DRPYVEYFNLTKYDRAEPLI-SKQQDIEAVIGELRDEL--KNIRVIL 641
Query: 650 ------SVSGITHLIELPAN--FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
I L+E+ VP++W KV STK R+ +P + +L E L
Sbjct: 642 KRPMLNYKDEIDFLVEIRNTQVSSVPVDWVKVASTKAVSRFQTPGTAKLVAKLQYHKELL 701
Query: 702 TIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQ 761
+ ++SF+K G Y + A+ L+ DC+ +LA S N ++VRP F + P
Sbjct: 702 QDLALQEYESFIKRITGEYTSLRKAILHLSTYDCILSLAATSCNVDYVRPKF--NTAPQC 759
Query: 762 IHICSGRHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQV 821
I++ +GR+P+++++ + ++PND NL+ E + IITGPNMGGKS YIRQVAL+ IMAQ+
Sbjct: 760 INVINGRNPIIESLDV-RYMPNDVNLNREGKKIMIITGPNMGGKSSYIRQVALLVIMAQI 818
Query: 822 GSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELG 881
G +VPA AE + D I+TR+GA D++ + STF E+ E ILR+ T SL+++DE+G
Sbjct: 819 GCYVPAQEAEFSIFDQIFTRIGAYDNLLRNDSTFKIEMTEMVQILRSSTENSLLLLDEVG 878
Query: 882 RGTSTHDGVAIAYATLDYLLE-HKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSH 939
RGT THDG++I+YA L Y +E H C ++LF+THY + I++ +G YH+SY+
Sbjct: 879 RGTGTHDGISISYALLRYFIELHNACPLILFITHYASLGSIRSPI---LGNYHMSYIEEK 935
Query: 940 KVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
+ ++ V +LYK+ G + +S+G VA+LA + I+RA I+ L+ E+ S
Sbjct: 936 R-----PGENWPSVVFLYKLKEGRAHNSYGLNVAKLADIQTGIINRAYKISTMLKQEMES 990
>sp|Q6CHE5|MSH3_YARLI DNA mismatch repair protein MSH3 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=MSH3 PE=3 SV=1
Length = 990
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 273/936 (29%), Positives = 458/936 (48%), Gaps = 113/936 (12%)
Query: 84 THNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDH 138
T K E Q E+K ++ D LL ++VGYK+ +G+DAE+A ++ +L
Sbjct: 130 TKKTKLNATEFQWYEIKKQHRDTLLFVQVGYKYHIYGDDAEIAHAQTRLFLSPGITNLKD 189
Query: 139 --------------NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
+S P R++ + ++LV GFKVG V+Q E AA+K + K G
Sbjct: 190 IGNDGVVQQGSKYIKLAYSSFPVHRIDFYTKQLVEKGFKVGHVQQMEVAALK-NVENKKG 248
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVR 244
P R L+ +TK T E GG S+YLV + + G+ +
Sbjct: 249 PMIRELTNTFTKGTY--IESGNGGSVNDVQYSSYLVALHESKGDKPTVT----------- 295
Query: 245 LGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA 304
++A E+STGDV++ FND +++S LE LL+L+P E+L +S T KM Y
Sbjct: 296 --LLATEVSTGDVIWDSFNDDYVKSELEIRLLTLAPCEIL-NCGVSSSTLKMCQKYMHR- 351
Query: 305 SNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNM 364
G LAE+ N+ E+ + + + Q E + ++ +
Sbjct: 352 --------------NKGRLAEM-----NVLEEEVEDPDAQVALFFEGKANAGTCSTVLEL 392
Query: 365 PDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE 424
P + + T R+L L+ + L +F +GS M LSANT+ LE+ N ++ +
Sbjct: 393 PAMVKTLILATSRYLTHCKLDSLFLLTNNFTRYTGSY-MRLSANTVASLELFANTTDHTA 451
Query: 425 YGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQH 484
G+L ++N LT++GSR L++WV+ PL DR I RL AV I +S+ + E
Sbjct: 452 KGSLFWVLNRCLTVFGSRELKKWVSRPLTDRTAILQRLSAVEAIIKSIYGAESDE----- 506
Query: 485 DEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGK 544
+++ ++ L PD+ + + R+ + E +++ +L+ +
Sbjct: 507 -------------LTTLINKLVKLLKPIPDLSKMLMRLHYGQLNRKEVYLLLRELLFVAQ 553
Query: 545 QLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLN 604
+ + G + + + + + L + S KLL +N +AA Q + L
Sbjct: 554 EFKP----GSGDKYIDTNPVLGEIFNSLGIHVSD------IEKLLEEINPDAARQDEALT 603
Query: 605 LMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANF 664
+ + + K V++ EL + R +L L++ SV+GI +LIE+ AN
Sbjct: 604 FFVTDPPSLVDRKKDLKKVEA---ELQIELLALRAELNRPKLQYSSVAGIDYLIEV-ANK 659
Query: 665 ---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
K+PL W K++ TK R+ +P + + + + E+L C ++ F +Y
Sbjct: 660 DTKKLPLEWTKISGTKSVSRFRTPTLNSLVKRHEYCVEKLKAACDIEFNMFRSRCATHYE 719
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
F++ V A++ DCL ALA +S +V+ +VD+ I + RH V+ L+ N++
Sbjct: 720 FFRSMVVAMSQFDCLFALAKVSGQSGWVKADYVDEG---GIDLKDSRH-VITEKLMTNYI 775
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
ND + ++TGPNMGGKS +RQ+AL ++A +G +VPAS A++ + D I R
Sbjct: 776 SNDIKIRCP----TVVTGPNMGGKSSLVRQIALSVLLAHIGCYVPASKAQIPITDSILCR 831
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
MGA D+I G+STF+ EL E + ILRN T++SLV++DE+GRGT+T DG+AIA++ L + +
Sbjct: 832 MGAQDNIMSGQSTFMVELCECAEILRNATSKSLVLLDEIGRGTTTTDGIAIAHSVLKHFI 891
Query: 902 EHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVP 961
E + + LF+THYP + ++ + H MD + + YK+ P
Sbjct: 892 EL-EALTLFITHYPLGQLLDSEDSNKCDLVH------------MDITNTNPPIFTYKMKP 938
Query: 962 GVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEV 997
G + S+G VA LA +P + I+RA + ++ +V
Sbjct: 939 GSATDSYGLNVAGLAGIPQAIINRAEEMGKDMKHDV 974
>sp|A7TTQ1|MSH3_VANPO DNA mismatch repair protein MSH3 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=MSH3 PE=3 SV=1
Length = 1023
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 284/950 (29%), Positives = 465/950 (48%), Gaps = 136/950 (14%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA-----HLDHN--- 139
K TPL+QQV +LK + D +L+I VGYK++ F +DAE+ +K+L I +D +
Sbjct: 134 KLTPLDQQVKDLKLLHMDKILVIRVGYKYKCFAQDAEIVSKILHIMLIPGKLTIDESNPQ 193
Query: 140 ------FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK--AHGPGKAGPFGRGLS 191
F S P RL VH+ LV+ KV VV+Q+ET+AIK ++ K F R +S
Sbjct: 194 DSNYRQFAYCSFPDIRLKVHLETLVHNNLKVAVVEQSETSAIKKNSNASSKNSVFERKIS 253
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
+YTKAT G+ N + + + + KI + F +++V
Sbjct: 254 GVYTKATFGINSAFSSNRKNVLGQYNSIWII--NFSEIDKINSSFF---------MISVN 302
Query: 252 ISTGDVVYGEFNDGFLR-SGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
+++G+++Y F LE + L+P E+L +S EK+ L G S +
Sbjct: 303 LNSGEIIYDTFECSTTSIENLETRIKYLNPIEVL---TVSALPEKVKLRLHGSNSTI--- 356
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
L ED + ++ E+ N + +G +N+ +
Sbjct: 357 --------------------------LLKEKEDIDKEIMEEIN--KSTKG-LNLSAELFE 387
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSE--YGTL 428
+ + ++L ++ E ++ + +++ + M L+A ++ L + G E G+L
Sbjct: 388 LVPVLYKYLTEYNNEELLLISENYKPFASKKHMVLNAAAIESLGIF-----GEEGGKGSL 442
Query: 429 LHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKN 488
+++HT T +GSR LR W+ HPL D+ I RLDAV I + +
Sbjct: 443 FWLLDHTRTSFGSRKLREWILHPLLDKKEIEDRLDAVDCIIHEVSNI------------- 489
Query: 489 SDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQ- 547
F+ L+ +LT++ PD+ R I RI + T + E I Y KQ++
Sbjct: 490 ---------FFESLNKMLTNV---PDLLRTINRIAYGTTSRKE-------IYYFLKQMKS 530
Query: 548 -----QLHIDGEYREKVTSK-TLH--SALLKRLILTASSPAVIGKAAKLLSTVNKEAADQ 599
QLH + + V++ +H SALL L+ +S +LS +N + +
Sbjct: 531 FSDHFQLHSNYLNSQVVSNDGRIHKSSALLTNLLTEITSGLKEINIENILSMINVSSVME 590
Query: 600 GD-------LLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
D NL + + E+ + + + K EL ++ RK L +L +
Sbjct: 591 KDTYKQVSEFFNLNYYDHAE--EIIKIQGNINEVKNELAEELSSIRKILKRPHLNYKD-- 646
Query: 653 GITHLIEL--PANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWD 710
+ +LIE+ +P +W VN TK RYH+P +++L + L + +
Sbjct: 647 EMDYLIEVRNTQTKGLPSDWIVVNRTKMISRYHTPTSRKLIEKLQYQKDILYQETQKEYF 706
Query: 711 SFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHP 770
F+K Y + +A DC+ ALA+ S+N N+VRPV D+ + + + R+P
Sbjct: 707 QFVKRIKNDYFALNKIINHIATYDCILALASTSQNMNYVRPVLTDESQFIDAK--NARNP 764
Query: 771 VLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSA 830
+++++ + N+VPND NL IITGPNMGGKS YIRQVAL+ I+AQVGS+VPA
Sbjct: 765 IIESLDI-NYVPNDVNLSHSAGKFLIITGPNMGGKSSYIRQVALLVILAQVGSYVPADFM 823
Query: 831 ELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGV 890
+ + D I TR+GA D++ +G+STF EL E I++N T SL+++DE+GRGTST DG
Sbjct: 824 KTSIFDKILTRIGAYDNLLKGQSTFKVELLEIQNIIKNKTENSLLLLDEVGRGTSTEDGK 883
Query: 891 AIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKS 949
AI+Y+ +DY + C +VLF THYP + I +K S Y++ ++ K + +
Sbjct: 884 AISYSIVDYFINLPVCPLVLFTTHYPFLGSINSKILKS---YYMDFVEQKK-----EGED 935
Query: 950 DQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSS 999
+ +LYK+ G+++SSFG VA+LAQ+ I+ A I+ K+ E +
Sbjct: 936 WPSIVFLYKLRSGITDSSFGLNVARLAQIDKDIINHAFSISEKIRQETET 985
>sp|P25336|MSH3_YEAST DNA mismatch repair protein MSH3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MSH3 PE=1 SV=2
Length = 1018
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 272/936 (29%), Positives = 452/936 (48%), Gaps = 112/936 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------A 134
K TPL++QV +LK + D +L+I VGYK++ F EDA +++L I
Sbjct: 131 KLTPLDKQVKDLKMHHRDKVLVIRVGYKYKCFAEDAVTVSRILHIKLVPGKLTIDESNPQ 190
Query: 135 HLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG--KAGPFGRGLS 191
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H PG K+ F R +S
Sbjct: 191 DCNHRQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGASKSSVFERKIS 250
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
++TKAT G++N + + D + GK+ + +++V
Sbjct: 251 NVFTKATFGVNSTFVLRGKRILGDTNS-IWALSRDVHQGKV----------AKYSLISVN 299
Query: 252 ISTGDVVYGEFNDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
++ G+VVY EF + L L+ + L P E+L+ T+ + L A ++
Sbjct: 300 LNNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLVN------TDDLPLHVAKFFKDISCP 353
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+ + + ED + + N E I P L ++
Sbjct: 354 LIHKQEY----------------------DLEDHVVQAIKVMN-----EKIQLSPSL-IR 385
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
++ H+ ++ E++M + + + + + M L N+LQ L++ ++ G+L
Sbjct: 386 LVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLLDPNSLQSLDIFTHDGGK---GSLFW 442
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T +G R+LR W+ PL D + I RLDA+ I + + ES+ Q
Sbjct: 443 LLDHTRTSFGLRMLREWILKPLVDVHQIEERLDAIECITSEINNSIFFESLNQ------- 495
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQ 548
L +PD+ R + RI + T + E ++ I ++ Q
Sbjct: 496 -----------------MLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKMHQ 538
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LLN 604
++ ++ S LL RL + + L+ +N A + + +++
Sbjct: 539 SYLSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTQLPHFLTMINVSAVMEKNSDKQVMD 598
Query: 605 LMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
++N SE + + ++ +S + +L + RK L L F + +LIE+ +
Sbjct: 599 FFNLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRD--EVDYLIEVKNS 656
Query: 664 --FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+P +W KVN+TK R+ +P +L + L + FL + Y
Sbjct: 657 QIKDLPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAEYT 716
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E + LA DC+ +LA S N N+VRP FV+ + + + R+P+++++ + ++V
Sbjct: 717 ELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAK--NARNPIIESLDV-HYV 773
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA L + + + TR
Sbjct: 774 PNDIMMSPENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTR 833
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA D I G STF E+ + +IL+NC +SL+++DE+GRGT THDG+AI+YA + Y
Sbjct: 834 IGAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFS 893
Query: 902 EHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E C ++LF TH+P + +IK+ + YH+ Y+ K + V +LYK+
Sbjct: 894 ELSDCPLILFTTHFPMLGEIKSPL---IRNYHMDYVEEQKT-----GEDWMSVIFLYKLK 945
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G++ +S+G VA+LA+L I+RA I+ +L E
Sbjct: 946 KGLTYNSYGMNVAKLARLDKDIINRAFSISEELRKE 981
>sp|A6ZTR3|MSH3_YEAS7 DNA mismatch repair protein MSH3 OS=Saccharomyces cerevisiae
(strain YJM789) GN=MSH3 PE=3 SV=2
Length = 1018
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 272/936 (29%), Positives = 452/936 (48%), Gaps = 112/936 (11%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-------------A 134
K TPL++QV +LK + D +L+I VGYK++ F EDA +++L I
Sbjct: 131 KLTPLDKQVKDLKMHHRDKVLVIRVGYKYKCFAEDAVTVSRILHIKLVPGKLTIDESNPQ 190
Query: 135 HLDH-NFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPG--KAGPFGRGLS 191
+H F S P RLNVH+ RLV+ KV VV+Q ET+AIK H PG K+ F R +S
Sbjct: 191 DCNHRQFAYCSFPDVRLNVHLERLVHHNLKVAVVEQAETSAIKKHDPGASKSSVFERKIS 250
Query: 192 ALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVE 251
++TKAT G++N + + D + GK+ + +++V
Sbjct: 251 NVFTKATFGVNSTFVLRGKRILGDTNS-IWALSRDVHQGKV----------AKYSLISVN 299
Query: 252 ISTGDVVYGEFNDGFL-RSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVE 310
++ G+VVY EF + L L+ + L P E+L+ T+ + L A ++
Sbjct: 300 LNNGEVVYDEFEEPNLADEKLQIRIKYLQPIEVLVN------TDDLPLHVAKFFKDISCP 353
Query: 311 CASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
+ + + ED + + N E I P L ++
Sbjct: 354 LIHKQEY----------------------DLEDHVVQAIKVMN-----EKIQLSPSL-IR 385
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
++ H+ ++ E++M + + + + + M L N+LQ L++ ++ G+L
Sbjct: 386 LVSKLYSHMVEYNNEQVMLIPSIYSPFASKIHMLLDPNSLQSLDIFTHDGGK---GSLFW 442
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T +G R+LR W+ PL D + I RLDA+ I + + ES+ Q
Sbjct: 443 LLDHTRTSFGLRMLREWILKPLVDVHQIEERLDAIECITSEINNSIFFESLNQ------- 495
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI--LYAGKQLQQ 548
L +PD+ R + RI + T + E ++ I ++ Q
Sbjct: 496 -----------------MLNHTPDLLRTLNRIMYGTTSRKEVYFYLKQITSFVDHFKMHQ 538
Query: 549 LHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGD----LLN 604
++ ++ S LL RL + + L+ +N A + + +++
Sbjct: 539 SYLSEHFKSSDGRIGKQSPLLFRLFSELNELLSTTQLPHFLTMINVSAVMEKNSDKQVMD 598
Query: 605 LMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPAN 663
++N SE + + ++ +S + +L + RK L L F + +LIE+ +
Sbjct: 599 FFNLNNYDCSEGIIKIQRESESVRSQLKEELAEIRKYLKRPYLNFRD--EVDYLIEVKNS 656
Query: 664 --FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYA 721
+P +W KVN+TK R+ +P +L + L + FL + Y
Sbjct: 657 QIKDLPDDWIKVNNTKMVSRFTTPRTQKLTQKLEYYKDLLIRESELQYKEFLNKITAEYT 716
Query: 722 EFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFV 781
E + LA DC+ +LA S N N+VRP FV+ + + + R+P+++++ + ++V
Sbjct: 717 ELRKITLNLAQYDCILSLAATSCNVNYVRPTFVNGQQAIIAK--NARNPIIESLDV-HYV 773
Query: 782 PNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTR 841
PND + E IITGPNMGGKS YIRQVAL+ IMAQ+GSFVPA L + + + TR
Sbjct: 774 PNDIMMSPENGKINIITGPNMGGKSSYIRQVALLTIMAQIGSFVPAEEIRLSIFENVLTR 833
Query: 842 MGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLL 901
+GA D I G STF E+ + +IL+NC +SL+++DE+GRGT THDG+AI+YA + Y
Sbjct: 834 IGAHDDIINGDSTFKVEMLDILHILKNCNKRSLLLLDEVGRGTGTHDGIAISYALIKYFS 893
Query: 902 EHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVV 960
E C ++LF TH+P + +IK+ + YH+ Y+ K + V +LYK+
Sbjct: 894 ELSDCPLILFTTHFPMLGEIKSPL---IRNYHMDYVEEQKT-----GEDWMSVIFLYKLK 945
Query: 961 PGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
G++ +S+G VA+LA+L I+RA I+ +L E
Sbjct: 946 KGLTYNSYGMNVAKLARLDKDIINRAFSISEELRKE 981
>sp|Q6FVN6|MSH3_CANGA DNA mismatch repair protein MSH3 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=MSH3 PE=3 SV=1
Length = 1025
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 280/942 (29%), Positives = 471/942 (50%), Gaps = 147/942 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL------GIYAHLDHN---- 139
TPL++QV +LK D +L+I VGYK++ F +DA +A+ +L G D N
Sbjct: 149 TPLDRQVKDLKLGNMDKVLVIRVGYKYKIFAQDAIIASTILHLQLIPGKVTIDDSNPNDS 208
Query: 140 ----FMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGP--FGRGLSAL 193
F S P RL VH+ RLV +G KV VV+Q+ETA K KA F R ++
Sbjct: 209 KYKQFAYCSFPDVRLKVHLERLVRSGLKVAVVEQSETATTKKFDNSKAKTSVFERKITGT 268
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDV-----RLGVV 248
Y+KAT C E N+ N+ N ++ +V + +
Sbjct: 269 YSKATYAT---------NCEFEVNH--------ENILGTNNSIWALDIEVSDSIYKYYLW 311
Query: 249 AVEISTGDVVYGEF---NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPAS 305
++++S G+V+Y F D F S +E + L+P+E++ +
Sbjct: 312 SIQLSNGEVIYDSFEESKDNF--SKVETRMKYLNPSEIV----------------SPVVD 353
Query: 306 NVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG--NHRSAIEGIMN 363
+ ++ R F+ L Y+ + ED +++P++ N+R
Sbjct: 354 SFPIKLKKR--FLD---LQLCQKNYDILAED---------LNIPKKELLNNR-------- 391
Query: 364 MPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGS 423
++ + R+LK++ E+++ +G+++R S + + L A T+ L+++ SN
Sbjct: 392 ----LIELWHILYRYLKEYSNEKLLNIGSNYRHFSQKISIQLQAQTINNLDLI---SNDD 444
Query: 424 EYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQ 483
GTL I++HT T +G RLL+ W+ PL ++ I RL+A+ I ES S
Sbjct: 445 SKGTLFWILDHTRTPFGKRLLKEWLLRPLLSKDAIVDRLNAIDCILESANSI-------- 496
Query: 484 HDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRI-FHRTATPSEFIAVMQAI--- 539
F+ L+ ++ + PD+ R I R+ F +T+ + + Q
Sbjct: 497 --------------FFESLNQMMKGI---PDLLRTINRVSFGKTSQREVYFLLKQLTGVI 539
Query: 540 --LYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAA 597
A K ++ I+ T T ++++ ++ + S + +LL +N A
Sbjct: 540 KHFEAHKDYIEVEINSNSGAIKTKSTKLASIMTQMFEFSLSSVI----PQLLLMINVSAV 595
Query: 598 DQGD----LLNLMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVS 652
+ D LL ++N SE + + ++ + S K +L + +K L +L +
Sbjct: 596 MEKDQKKQLLGFFHLNNYDNSENIIKMQRDIDSVKAQLHDELQNIKKILKRPHLAYKD-- 653
Query: 653 GITHLIELPANFKV---PLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAW 709
+ LIE+ N +V P +W KVN+TK R+ +P ++ L N+ L +
Sbjct: 654 EVDFLIEV-RNTQVKGIPSDWVKVNNTKMISRFLTPRTKELVELLEYQNDLLYNEISKEY 712
Query: 710 DSFLKEFGGYYAEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRH 769
D FL YY E + + LA DCL +LA +S N + RPVF D +E + I R+
Sbjct: 713 DQFLNRIASYYNEVKTFIMNLAEYDCLLSLAAVSCNVGYTRPVFTDSNEQLIIA-KQARN 771
Query: 770 PVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASS 829
P+++++ +D +VPND + + +ITGPNMGGKS YIRQ+AL+ IMAQ+GS+VPA S
Sbjct: 772 PIIESLGVD-YVPNDIEMEKDSGRVLVITGPNMGGKSSYIRQIALMVIMAQIGSYVPAES 830
Query: 830 AELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDG 889
+L V D + TR+G+ D+I QG+STF EL+E I+ +CT+++L+++DE+GRGTST DG
Sbjct: 831 LKLSVFDNVLTRIGSQDNILQGQSTFKVELSETVEIINSCTSKTLLLLDEVGRGTSTRDG 890
Query: 890 VAIAYATLDYLLEHKKC-MVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSK 948
AIA+A + Y +E ++C +LF TH+ + +K+ S YH++Y+ HK +++
Sbjct: 891 NAIAWALIKYFVEEEQCPFILFTTHFTIVTTVKSPLLKS---YHMNYV-QHK----NENE 942
Query: 949 SDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIA 990
+ V +LY++ GV++SS+G VA+LA + I+RA +A
Sbjct: 943 NWTTVVFLYQLKAGVTDSSYGLNVAKLAGIDTHIINRAHDVA 984
>sp|O74502|MSH6_SCHPO DNA mismatch repair protein msh6 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=msh6 PE=1 SV=1
Length = 1254
Score = 340 bits (871), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 262/954 (27%), Positives = 433/954 (45%), Gaps = 112/954 (11%)
Query: 66 PKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEM 125
P P TL IP PS+ T + P E+Q ++K D ++ + G + + DA +
Sbjct: 357 PNYDPRTLY-IP-PSAWAT----FKPFEKQFWKIKKDLMDTVVFFQKGKFYELYENDAAI 410
Query: 126 AAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKA-----HGP 180
+V + N IP + + + G+++ V Q ETA K
Sbjct: 411 GHQVFSLKLTDRVNMKMVGIPEASFDYWASQFIAKGYRIARVDQLETALGKEIKDRQRTQ 470
Query: 181 GKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDG 240
+ RGL+ + T TL + + D I+ + D
Sbjct: 471 KEEKVVQRGLTQVLTSGTL----------------VDEAMLTSDLSTYCMAIKESLQSDN 514
Query: 241 FDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY 300
+ G+ ++ STG EF D R+ L+ +L + P EL+L + SK ++K + A
Sbjct: 515 EEPSFGICFIDTSTGGFHMCEFTDDIHRTKLDTLLTQVRPKELILEK--SKISQKSIRAI 572
Query: 301 AGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEG 360
+ C + ++ + Y +NE ++ ++ +EG
Sbjct: 573 -------------KYC-VSSSSIWNFIKPYTEFW-----DNERVEREIIAGDYFKNGLEG 613
Query: 361 -------IMNMPDLAVQALALTIRHLKQFGLERIMCLGASFRSLSGSMEMT---LSANTL 410
++ LA+ A +L+Q L++ MC +F S + T ++ TL
Sbjct: 614 APKILKSYLSEKPLAISAFGALFWYLRQLKLDKDMCSMGNFDEYDASQQSTSLLMNGQTL 673
Query: 411 QQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAE 470
+ LE+ N+ +G GTL H++ +T +G RL W+ HPL I+ARLD V IA+
Sbjct: 674 KNLEIFSNSFDGGSEGTLFHLLCRCVTPFGKRLFHTWLCHPLRSGTAINARLDVVELIAD 733
Query: 471 SMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPS 530
+ I ++ L + PD++R I+R+ + P+
Sbjct: 734 NP---------------------------VIRDTIWGFLHKLPDLERLISRVHAGRSKPA 766
Query: 531 EFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLS 590
+F+ V++ QL E+ E V TL +++ S+P + +
Sbjct: 767 DFVRVLEGFQRINSAFDQLR--EEFME-VAEGTLLGEIIQ------SAPNMKEELEAWTR 817
Query: 591 TVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMS 650
N + A + + I G +E ++K K EL +L+ +KQL +L F +
Sbjct: 818 AFNWQKASEEGVFEPEI---GFEAEYDTSQKYQSELKNELYALLEQYKKQLRCSSLNFKN 874
Query: 651 VSGITHLIELPANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANE-ELTIVCRAAW 709
+ + +E+P++ KVP+NW K++ TKKT RY++ E+ + +L A E L I+ R
Sbjct: 875 IGKEVYQVEVPSDVKVPVNWCKMSGTKKTNRYYNDELRKKIKKLLEAEELHLAIMSRMQ- 933
Query: 710 DSFLKEFGGYYAEFQAAVQALAALDCLHAL--ATLSRNKNFVRPVFVDDHEPVQIHICSG 767
+ F F Y ++ A ++ A++DC +L A + + + RP ++ + ++
Sbjct: 934 EKFYIRFDSNYEQWLALIKYTASIDCFFSLSQAAAALGEPYCRPEIIEQKDG-HLYFEEL 992
Query: 768 RHPVLDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPA 827
RHP ++ FVPND L E ++TGPNM GKS +RQV + IMAQ+G +VPA
Sbjct: 993 RHPCINASAASTFVPNDVVLGGESPNMIVLTGPNMAGKSTLLRQVCIAVIMAQLGCWVPA 1052
Query: 828 SSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTH 887
A + + IYTR+GA+D I RSTF+ EL+E IL C +SLVI+DELGRGTST+
Sbjct: 1053 KRASITPMTSIYTRLGANDDIMSARSTFMVELSETKKILDECGPKSLVILDELGRGTSTY 1112
Query: 888 DGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDS 947
DG AIAYA L +L+ + C+ F THY + V H + ++ +D
Sbjct: 1113 DGHAIAYAVLHHLVSNIGCLGFFSTHYQSLC---------VDFMHHRQVRLMQMAAAVDE 1163
Query: 948 KSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRV 1001
K + VT+LYK+ G+ S+G VA +A LP I A A++LE +S +
Sbjct: 1164 KI-RRVTFLYKLEDGICPKSYGMNVASMAGLPEKVIDAAEEKASELEQASASFI 1216
>sp|A6TR79|MUTS_ALKMQ DNA mismatch repair protein MutS OS=Alkaliphilus metalliredigens
(strain QYMF) GN=mutS PE=3 SV=1
Length = 880
Score = 306 bits (784), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 268/920 (29%), Positives = 432/920 (46%), Gaps = 132/920 (14%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMTAS 144
TP+ QQ ++K +YPD LL +G + F +DAE A++ L G L+
Sbjct: 5 TPMMQQYFDIKKQYPDSLLFFRMGDFYELFFQDAETASRELEITLTGRSCGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ RLV+ G+KV + +Q E + +A G K R + + T TL +
Sbjct: 65 VPHHAATGYIDRLVSNGYKVAICEQIEDVS-QAKGIVK-----RDVVRVITPGTLIDTQL 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGD--GFDVRLGVVAVEISTGDVVYGEF 262
+ ++ NYL+ V FG GF G+ V+ISTGD+ E
Sbjct: 119 LDDKKN------NYLMSV--------------FGSRTGF----GLAYVDISTGDLFATEI 154
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
+ L + + P ELL K+ ++ S ++ R F G
Sbjct: 155 KENIHPQMLIDEMGRVLPQELLYFIETDKEDPTII-------SMIK----KRFDFYTNG- 202
Query: 323 LAEVMSLYENMG-EDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPD-LAVQALALTIRHLK 380
YE EDT + N+ + + N S +EG+ P L + A +LK
Sbjct: 203 -------YEEWSYEDTFALNQ-----IKDHFNVVS-LEGLGFHPSHLGINAAGALFHYLK 249
Query: 381 ---QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLT 437
+ LE I + S +MTL NT + LE+ + S+ G+LL +++ T T
Sbjct: 250 TTQKRALEHINHINV----YSIHEKMTLDINTRKNLELTETIRSKSKKGSLLGVLDKTST 305
Query: 438 IYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQ 497
G R+LR+W+ PL D +I+ RL+AV + E +
Sbjct: 306 AMGGRMLRKWIEAPLIDPVIINKRLEAVQLLKEQIE------------------------ 341
Query: 498 FYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE 557
+ + SL + D++R +I + + TP + IA+ ++ Y + L E
Sbjct: 342 ---LRQELKESLKKIYDLERLAGKISYGSVTPRDLIALKNSLSYLPSIINGL-------E 391
Query: 558 KVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVA 617
K+ +T S + L V +L + D G II G EV
Sbjct: 392 KIQGETFQSLVQSIDPLDEVHSLV---ELSILEDAPLSSKDGG------IIQEGYHKEVD 442
Query: 618 RARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL-PANFK-VPLNWAKVNS 675
+ A ++ + L R G+++L+ + IE+ +N VP + + +
Sbjct: 443 ELKNASTEGRQWIAQLEQKERVNSGIKSLKIKYNKIFGYYIEITKSNLSMVPTEYIRKQT 502
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY +PE+ ++ A E++ ++ + ++ Q +A+A LD
Sbjct: 503 LANCERYVTPELKEIESKILGAEEKVILLEYHLFIEVREKIAHEITRIQQTARAIAELDV 562
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLD-TILLDNFVPNDTNLHAEREYC 794
L++ A ++ NF++P +E I I GRHPV++ T ++FVPNDT +
Sbjct: 563 LYSFAEIAAENNFIKPHINTSNE---IKIVEGRHPVVELTFNKESFVPNDTYMDNRDCSM 619
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNM GKS Y+RQVALI +MAQ+GSFVPAS A + ++D I+TR+GASD + QG ST
Sbjct: 620 SIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASEASIGIVDRIFTRIGASDDLAQGHST 679
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E++E + IL N TA SLVI+DE+GRGTST DG++IA+A ++Y+ ++KK LF THY
Sbjct: 680 FMVEMSEMANILNNATANSLVILDEIGRGTSTFDGLSIAWAVIEYMQQYKKSKTLFSTHY 739
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ +++ K G V Y++ + + +++ +L KVV G + S+G +VA+
Sbjct: 740 HELTELEGKIQG-VKNYNI-----------LVEEDGEEIVFLRKVVSGSTSKSYGIQVAK 787
Query: 975 LAQLPPSCISRATVIAAKLE 994
LA LP + + RA I + LE
Sbjct: 788 LAGLPLNTLIRAQEILSDLE 807
>sp|A0LXZ7|MUTS_GRAFK DNA mismatch repair protein MutS OS=Gramella forsetii (strain KT0803)
GN=mutS PE=3 SV=1
Length = 871
Score = 305 bits (780), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 271/944 (28%), Positives = 443/944 (46%), Gaps = 146/944 (15%)
Query: 86 NKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN----FM 141
++K TPL QQ +K KYPD +L+ VG + FGEDA AA++L I +N
Sbjct: 6 SQKVTPLMQQYNSIKLKYPDAMLLFRVGDFYETFGEDAVKAARILNIVLTNRNNGGERTE 65
Query: 142 TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEA 201
A P LN ++ +LV AG +V + Q E + RG++ L T
Sbjct: 66 LAGFPHHSLNTYLPKLVKAGQRVAICDQLEDPKMTK------TIVKRGVTELVTPG---- 115
Query: 202 AEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGE 261
V +D +SN +C V FG LGV +++STG+ + +
Sbjct: 116 ---VAMNDDILNSKSNNFLCAVH------------FGKK---NLGVSFLDVSTGEFLCAQ 157
Query: 262 FNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
N ++ + +L + P+E+L+ + K+ + + CF
Sbjct: 158 GNTEYI----DKLLQNFGPSEILVQKKFKKEFNESF-------------GKDKHCFYLDD 200
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQG-NHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ ++ + E+TL N Q + G +H EGI +A A+ + +
Sbjct: 201 WIFKI-----DYSEETL-NAHFQTKSLKGFGIDHLE--EGI-----IASGAVLYYLAETR 247
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
L+ I S ++ + + T++ LE+ +S + TLL +++ T++ G
Sbjct: 248 HHRLQHI----NSINRIAEEQYVWMDRFTIRNLELY--HSTAANAVTLLDVIDKTISPMG 301
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
RLL+RW+ PL D +I RL V D I P+
Sbjct: 302 GRLLKRWLALPLKDAEMIEKRLQVV------------------------DFLIKNPE--- 334
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYRE-KV 559
IL+++ + D++R I+++ + +P E + ++ L A +++L + K+
Sbjct: 335 ILANIQDQIREISDLERLISKVATQKISPRE-VNQLKNSLNAIIPVKELALKCNNEALKI 393
Query: 560 TSKTLHSALLKRLILTAS----SPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
LHS L R ++ S +P +I + +I++G SE
Sbjct: 394 IGDNLHSCDLLREKISESISEDAPVLIQRGG--------------------VIASGFSSE 433
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKV 673
+ R S K+ LD +I ++ G+ +L+ S + + IE+ K VP W +
Sbjct: 434 LDELRGLAFSGKDYLDKMIQRETEKTGISSLKIGSNNVYGYYIEVRNTHKDKVPEEWTRK 493
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY + E+ ++ A E++ + + + + Y Q + +A L
Sbjct: 494 QTLVNAERYITEELKEYESKILGAEEKILHLEQELFGKLIAWMAEYIDPVQQNARLIARL 553
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAEREY 793
DCL + A ++ +N+ +P D + + I GRHPV++ L V NLH +RE
Sbjct: 554 DCLCSFAQQAQAENYSKPEITDSY---GMDIEEGRHPVIEKQLPPGEVYVTNNLHLDREE 610
Query: 794 CQII--TGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
QII TGPNM GKS +RQ ALI +MAQ+GSFVPA SAE+ ++D I+TR+GASD+I G
Sbjct: 611 QQIIMITGPNMSGKSAILRQTALIVLMAQMGSFVPARSAEIGLVDKIFTRVGASDNISMG 670
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH-KKCMVLF 910
STF+ E+NE + IL N + +SLV++DE+GRGTST+DG++IA+A +YL EH K LF
Sbjct: 671 ESTFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPAKPKTLF 730
Query: 911 VTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGF 970
THY ++ ++ F + ++VS + +V +L K+VPG SE SFG
Sbjct: 731 ATHYHELNEMCETFE-RIKNFNVSV-----------KELKDNVLFLRKLVPGGSEHSFGI 778
Query: 971 KVAQLAQLPPSCISRATVIAAKLEA----EVSSRVQNRSAKRDL 1010
VA++A +P + RA I AKLEA E S V +SA+ ++
Sbjct: 779 HVAKMAGMPQMVLHRANKILAKLEASHSMEDSGAVLKKSAEDEM 822
>sp|Q8XL87|MUTS_CLOPE DNA mismatch repair protein MutS OS=Clostridium perfringens (strain
13 / Type A) GN=mutS PE=3 SV=1
Length = 909
Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 277/941 (29%), Positives = 440/941 (46%), Gaps = 168/941 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVL-----GIYAHLDHNFMT 142
K TP+ +Q E+K Y D +L +G + F EDAE AA+ L G L+
Sbjct: 2 KLTPMMRQYFEIKENYKDCILFFRLGDFYEMFFEDAETAARELELVLTGRDCGLEKRAPM 61
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAA 202
IP N ++ RLV G+KV + +Q E + A G K YT ++
Sbjct: 62 CGIPFHASNSYIGRLVAKGYKVAICEQVEDPKV-AKGIVKRDVIKVITPGTYTDSSF--V 118
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV--YG 260
E+ ++NY++ + D RN R + +ISTGD + G
Sbjct: 119 EET---------KNNYIMTIYSDLE-----RN---------RCSLAITDISTGDFLATEG 155
Query: 261 EFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGG 320
E G + + +P E++L L ++ K + PA SR
Sbjct: 156 ELEKGVILDEIS----KFNPKEIILLDSLDQELIKDI-TLTTPA------LISR------ 198
Query: 321 GALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
+ + +E E+ L N E+ N S M + AL I +
Sbjct: 199 ----KPIEYFEEKFEEVL------NAQFGEKSNSLSL------MVKKSSNALVKYILDTQ 242
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
+ L I + SL M + LS+ + LE+ N S+ G+LL +++ T T G
Sbjct: 243 KISLTNINDI--EVYSLVDFMTIDLSSR--RNLELTENLREKSKKGSLLWVLDKTETSMG 298
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
SR+LRRW+ PL ++ I+ RL+AV E+ + S S HD Y
Sbjct: 299 SRMLRRWIEEPLVNKEKITLRLNAVEELFNDL-SLNDSLKEALHD------------IY- 344
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVT 560
DI+R + +I ++ A + IA+ +I GK I E T
Sbjct: 345 -------------DIERILGKISNKNANAKDLIALKTSI---GKIPNVKGI----IENCT 384
Query: 561 SKTLHS------------ALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMII 608
S L + LL++ I P++ K GDL I
Sbjct: 385 SSLLRNYHHNLDDLRDIYELLEKSI--KEDPSLTLK--------------DGDL-----I 423
Query: 609 SNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFK 665
+G SE+ R A + K+ + SL N R+ G+++L+ F V G + IE+ AN+
Sbjct: 424 KDGFNSEIDELRLAKTNGKDWISSLENREREFTGIKSLKVGFNKVFG--YYIEISKANYS 481
Query: 666 -VPL-NWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFL---KEFGGYY 720
+P + + + R+ +PE+ ++L A+E+L C +D FL E +
Sbjct: 482 SIPEGRYIRKQTLANAERFITPELKEIEEKLLGASEKL---CSLEYDIFLDIRNEVENHI 538
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDN 779
+ + +A LDC+ LA ++ +F++P +D E I +GRHPV++ ++
Sbjct: 539 DRLKTTAKIIAELDCISNLAFVALENDFIKPEINEDGET---KIENGRHPVVEKVIPKGE 595
Query: 780 FVPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIY 839
F+PNDT ++ + IITGPNM GKS Y+RQVA+I +M Q+GSFVPAS A + V+D I+
Sbjct: 596 FIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIF 655
Query: 840 TRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDY 899
TR+GASD + G+STF+ E+ E S IL+N T SLV++DE+GRGTST+DG++IA++ ++Y
Sbjct: 656 TRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEY 715
Query: 900 LLEHK--KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLY 957
+ ++K +C LF THY ++ ++ + G V Y V+ + D ++ +L
Sbjct: 716 ICKNKNLRCKTLFATHYHELTKLEGEIHG-VRNYSVAV-----------KEVDNNIIFLR 763
Query: 958 KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVS 998
K++ G ++ S+G +VA+LA +P I+RA I KLE E S
Sbjct: 764 KIIEGGADQSYGIEVAKLAGIPDDVINRAKEILEKLEMESS 804
>sp|A3DDI3|MUTS_CLOTH DNA mismatch repair protein MutS OS=Clostridium thermocellum (strain
ATCC 27405 / DSM 1237) GN=mutS PE=3 SV=1
Length = 870
Score = 298 bits (763), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 256/946 (27%), Positives = 437/946 (46%), Gaps = 160/946 (16%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY-----AHLDHNFMTAS 144
TP+ QQ +E+K +Y D +L +G + F DAE+A++ L I L+
Sbjct: 5 TPMMQQYLEIKEQYKDCILFFRLGDFYEMFFSDAEVASRELEITLTGKDCGLEERAPMCG 64
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P + ++ +L++ G+KV + +Q E A+ G R + + T T+ +
Sbjct: 65 VPFHSADSYIAKLISKGYKVAICEQIEDPALAK------GLVKRDVIRIVTPGTVTDSAM 118
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ ++ NYL+ + + G+ V+++TG+ +
Sbjct: 119 LDEKKN------NYLMSIYKNKN----------------YYGIACVDLTTGEFLSTHITF 156
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASR-DCFIGGGAL 323
G + L + SP+E+++ N++ R D +I G
Sbjct: 157 GNTFNKLMDEIAKFSPSEIVVNGEFFHD------------ENIKKTLKQRFDVYISG--- 201
Query: 324 AEVMSLYENMGEDTLSNNEDQNM---DVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLK 380
L + E S + +N V E+ I + + Q + + H++
Sbjct: 202 -----LEDKFFEKEFSIQKVRNYFKDYVIEENAFDLYINASGALLEYLEQTQKVNLSHIQ 256
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
F + RI M L T + LE+ + G+LL +++ T+T G
Sbjct: 257 NFNVYRI------------EEYMILDMATRRNLELTETMREKNRKGSLLWVLDRTMTSMG 304
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
R LR+W+ PL + + I RLDAV+E E +
Sbjct: 305 GRTLRKWIEQPLINLHDIKDRLDAVNEFKER---------------------------FM 337
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQQLHIDGE--- 554
I S V L DI+R +T++ +A + I++ +I Y + L+ L D
Sbjct: 338 IRSEVRELLRAVYDIERLMTKVILGSANCRDLISIKHSIGQVPYIKELLRDLKADLNVLS 397
Query: 555 YREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFS 614
Y E T ++ + K ++ P V A +G II G
Sbjct: 398 YNELDTLTDVYEIIDKAIV---DDPPV--------------AVKEGG-----IIKEGFNE 435
Query: 615 EVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANF--KVPLNW 670
EV R R A + K+ + L + R++ G++NL+ F V G + IE+ ++ +VP ++
Sbjct: 436 EVDRLRSASKDGKKWIAHLESKERERTGIKNLKVGFNKVFG--YYIEVTKSYYSQVPDDY 493
Query: 671 AKVNSTKKTIRYHSPE-------VLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ + RY +PE VL A D+L ++ + R + KE
Sbjct: 494 IRKQTLANCERYITPELKEIENTVLGAEDRLVELEYQIFVDVR---NKVAKEIN----RL 546
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVP 782
+ ++LA +D L +LA ++ +++ P DD +I I GRHPV++ I+ + FVP
Sbjct: 547 KTTARSLARIDVLCSLAEVADRESYTMPEVTDDD---KIEIKDGRHPVVEKIIGQEAFVP 603
Query: 783 NDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRM 842
NDT L + IITGPNM GKS Y+RQVALI +MAQ+GSFVPA SA++ ++D I+TR+
Sbjct: 604 NDTYLDMDENQIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAKIGIVDRIFTRV 663
Query: 843 GASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE 902
GASD + G+STF+ E++E + IL N T++SL+++DE+GRGTST+DG++IA+A ++Y+ E
Sbjct: 664 GASDDLAAGQSTFMVEMSEVANILGNATSKSLLVLDEIGRGTSTYDGLSIAWAVIEYIGE 723
Query: 903 HKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPG 962
LF THY ++ +++ + G + Y +S + +D+ +L K++ G
Sbjct: 724 KIGARTLFATHYHELTELEERIEG-IKNYCISV-----------EEKGEDIIFLRKILRG 771
Query: 963 VSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKR 1008
+++S+G +VA+LA +P I RA I KLE +R + R +R
Sbjct: 772 GADNSYGVQVARLAGIPDPVIHRAKEILKKLEDADITRKEKRITRR 817
>sp|B2KB17|MUTS_ELUMP DNA mismatch repair protein MutS OS=Elusimicrobium minutum (strain
Pei191) GN=mutS PE=3 SV=1
Length = 851
Score = 293 bits (750), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 254/941 (26%), Positives = 436/941 (46%), Gaps = 143/941 (15%)
Query: 85 HNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTAS 144
+K+ TPL +Q ++K+K D+++ +G + F DA A+++LGI
Sbjct: 3 ESKQLTPLMRQYNDIKSKNTDLIVFFRLGDFYEMFDSDAREASRILGIALTQRGGVPMCG 62
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
+P ++ +++ G KVG+ +Q T G GK+ F R + + T T+
Sbjct: 63 VPYHAAANYISKIIKEGRKVGICEQVGT------GEGKSKLFERKIVRVITPGTVI---- 112
Query: 205 VGGGEDGC--GGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
ED SNYLVCV D + G G A+++STG+ E
Sbjct: 113 ----EDNMLQSNVSNYLVCVFTD-------KKG---------WGAAAIDVSTGEFWVTEQ 152
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQ-PLSKQTEKMLLAYAGPASNVRVECASRDCFIGGG 321
D +GL +L +L+PAE+LL + L + M++ G
Sbjct: 153 ADDISLNGLSCMLAALNPAEILLDKITLDRVKSSMMIP---------------------G 191
Query: 322 ALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQ 381
++A + E ++ +P +S G A+ A+ ++ +
Sbjct: 192 SVATTIVPRE------------ESSQIPSNWPSQSVWAGKKTALTCALTAIKYI--NVNE 237
Query: 382 FGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGS 441
G + ++ ++ +S + L N ++ LE++ + NG+ G+L H+++ T+T G
Sbjct: 238 PGFKDLLI--PFYKEISDYL--ALDENAVRTLELV--SQNGARKGSLWHLLDFTVTPMGG 291
Query: 442 RLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYI 501
R L+ W+ +PL + I R + VS ++ P Y
Sbjct: 292 RTLKNWILNPLLNLADIEKRQNCVSNFYDN------------------------PLAYEE 327
Query: 502 LSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTS 561
L +L + DI+R ++R+ A P + + ++ L + G +
Sbjct: 328 LKVILADIS---DIERIMSRVGTGNAGPRDLAGLARS----------LAVHGALKNWFDK 374
Query: 562 KTLHSALLKRLILTASSPAVIGKAAKLLSTVNK-----EAADQGDLLNLMIISNGQFSEV 616
LK IL S VI A LL++ + + +D G II G +E+
Sbjct: 375 YGAVVPYLKENIL--SKITVIEDLANLLNSAIEPNPPIKISDGG------IIKQGFNAEL 426
Query: 617 ARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPANFKVPLNWAKVN 674
R ++ + L L + + G+ L+ F SV G + + KVP ++ +
Sbjct: 427 DDLRNTKNNSSKTLAELCEREKAKTGISTLKVGFNSVFGYYIEVSKGQSGKVPFSYTRKQ 486
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ R+ + E+ D++ A E++ + + +DS K + ++ +A+A LD
Sbjct: 487 TLTNAERFITEELKEIEDKILHAEEKILRLETSLFDSVRKHLAEHIGVMRSFAKAIAELD 546
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTIL-LDNFVPNDTNLHAEREY 793
LA ++ F +PV E + RHPV++ L L +FVPND +L E +
Sbjct: 547 VYSNLAHCAKVYKFTKPVI---DESNILKAADLRHPVVEACLPLGSFVPNDIDLGGETQ- 602
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
+ITGPNMGGKS Y++Q A++ I+AQ+GSFVPA+SA + ++D I TR+GA D+I G+S
Sbjct: 603 ISVITGPNMGGKSVYLKQAAVLVILAQMGSFVPAASAHVGIVDKIMTRIGAQDAIAMGQS 662
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLE--HKKCMVLFV 911
TF+ E+ E S+IL +CT +SL+++DE+GRGTST DG++IA+A ++L + VLF
Sbjct: 663 TFMVEMKETSHILASCTPKSLILLDEVGRGTSTFDGISIAWAITEFLYKPHGGGAKVLFA 722
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ D++ K+ G + +H +V D+ + +LYK+ G + S+G
Sbjct: 723 THYFELTDLENKYKG-IKNFHA------EVQEYKDADGQSKIAFLYKIKEGAGDKSYGIH 775
Query: 972 VAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLV 1012
V +LA LP + I RA + LEA+ + V S K D +V
Sbjct: 776 VGELAGLPATVIVRAKKVIKDLEAKKGTSV---SKKEDDIV 813
>sp|Q46CE2|MUTS_METBF DNA mismatch repair protein MutS OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=mutS PE=3 SV=1
Length = 900
Score = 293 bits (750), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 264/931 (28%), Positives = 432/931 (46%), Gaps = 130/931 (13%)
Query: 87 KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYA------HLDHNF 140
K TP Q E K YPD L+ +G + FGEDA+ AK L I
Sbjct: 3 KMMTPAMCQYYEAKQAYPDTLIFFRMGDFYESFGEDAKTIAKELEITLTARGKDKSGERM 62
Query: 141 MTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATL 199
A IP ++ ++ RL+N G+KV + +Q E P KA G RG+ + T T
Sbjct: 63 PLAGIPYHAIDTYLPRLINKGYKVAICEQLE-------DPKKAKGIVKRGVVRVVTPGT- 114
Query: 200 EAAEDVGGGEDGCGGESNYLVCVVDDD-GNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
A D D +NYL+ V + G GK F +GV ++ISTG+ +
Sbjct: 115 --AIDSSMFSDAS---NNYLMAVAGREIGKPGKNAENEF------EIGVSFLDISTGEFL 163
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPA--SNVRVECASRDC 316
+F D L + L + P+E +L L Y PA +R + ++
Sbjct: 164 TTQFRDSENFEKLLSELARMRPSECILPSSL----------YENPALAERLRAQTIVQE- 212
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNH--RSAIEGI--MNMPDLAVQAL 372
A +S + GE NH + +EG+ N+ D AV +
Sbjct: 213 ------FAPDISGAKEAGE--------------RLKNHFRVATLEGMGCENL-DFAVYSA 251
Query: 373 ALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIM 432
+ + + + + + + R+ S S M L + TL+ LE+++N + + +L I+
Sbjct: 252 WAALEYAQTTQMRELTHIN-TLRTYSNSEFMILDSVTLRNLEIVKNVRDEGDENSLYRIL 310
Query: 433 NHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVT 492
NHT T GSR L++W+ PL I+ RLDAV E+
Sbjct: 311 NHTKTPMGSRALKKWLLKPLLSVEKINYRLDAVEELT----------------------- 347
Query: 493 IVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH-I 551
+P Y L + L+ + DI+R + R+ + + + +A+ K L+ L +
Sbjct: 348 -AKPLLRYDLRNWLSDV---RDIERLVGRVVYGNSNARDLVAL-------KKSLEALPPV 396
Query: 552 DGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQG--DLLNLMIIS 609
E + S L+ A A + L +++ D+ + +I
Sbjct: 397 RDSLLENIESTILND--------IAVGLASFSELENLAEMIDRAIVDEPPISVREGGMIK 448
Query: 610 NGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELP-ANF-KVP 667
+G +E+ + ++++ + + R++ G+++L+ + IE+ AN +VP
Sbjct: 449 SGYNAELDELKDIASNSRQWIANFQQKERERSGIKSLKVGYNKIFGYYIEVTNANSSQVP 508
Query: 668 LNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAV 727
++ + + R+ +PE+ + ANE+ + + L+ + E Q
Sbjct: 509 EDYIRKQTMANAERFFTPELKEKESLILTANEKAIALEYEIFTEILQTLSAHSRELQETA 568
Query: 728 QALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNL 787
+ + LD L LA ++ N N++RP DD +I I GRHPV++ + FVPNDT +
Sbjct: 569 ERIGTLDVLTDLAEVAENNNYIRPQLTDD---CKILIRDGRHPVVENTVHGGFVPNDTEM 625
Query: 788 HAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDS 847
+ ++TGPNM GKS Y+RQ ALI IMAQVGSFVPAS A + ++D ++TR+GA D
Sbjct: 626 DCKENQFLLVTGPNMAGKSTYMRQTALIAIMAQVGSFVPASYASIGIIDQVFTRIGAFDD 685
Query: 848 IQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCM 907
+ G+STF+ E+ E + IL N + +SLV++DE+GRGTST+DG +IA A +++L K
Sbjct: 686 LASGQSTFMVEMVELANILNNASPRSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVG 745
Query: 908 V--LFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSE 965
V LF THY ++ ++ K V YHV+ + ++ +L K+VPG ++
Sbjct: 746 VRALFATHYHQLTALEEKLK-RVKNYHVAV-----------KEEGHELVFLRKIVPGATD 793
Query: 966 SSFGFKVAQLAQLPPSCISRATVIAAKLEAE 996
S+G +VA+LA +P I RA I +LE E
Sbjct: 794 RSYGIQVARLAGVPEKVIERANEILKELERE 824
>sp|B3EEE1|MUTS_CHLL2 DNA mismatch repair protein MutS OS=Chlorobium limicola (strain DSM
245 / NBRC 103803) GN=mutS PE=3 SV=1
Length = 871
Score = 292 bits (747), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 265/922 (28%), Positives = 417/922 (45%), Gaps = 122/922 (13%)
Query: 80 SSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN 139
S++ K+++P+ +Q +++K +YPD LL+ VG + F +DA A L I N
Sbjct: 2 SAKGVSEKEHSPMMRQYLDVKDRYPDYLLLFRVGDFYETFFDDAREVAAALNIVLTRRSN 61
Query: 140 FM-TASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKAT 198
+ A P ++ +LV G+KV V Q E A+ G R ++ + T
Sbjct: 62 EIPMAGFPHHASEGYIAKLVKKGYKVAVCDQVEDPAVAK------GIVRREITDIITPGV 115
Query: 199 LEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
+ + + NYL +V VG R V G F DV
Sbjct: 116 TYSDSILDDRHN------NYLCAIVF--LRVG--RQTVCGAAFI-------------DVT 152
Query: 259 YGEFN-DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAY-AGPASNVRVECASRDC 316
GEF G L L SL PAELL+ +++E + A AG A V E R
Sbjct: 153 TGEFRIAGLLPEDASVFLRSLHPAELLVSAADRERSETLRHALPAGTAFTVLDEWLFR-- 210
Query: 317 FIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTI 376
E+Q ++ + +++G + A Q A I
Sbjct: 211 -------------------------EEQAGEILARQFRTHSLKGFGIHDNPAGQVAAGVI 245
Query: 377 RHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTL 436
H + + + L MTL T + LE++ + +GS G+LL +++ T
Sbjct: 246 LHYLEETRQSSLQYITRITPLQSGDYMTLDLQTKRNLEIISSMQDGSINGSLLQVIDRTR 305
Query: 437 TIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEP 496
G+RLLR+W+ PL I+ RLDAV E+ + M +R
Sbjct: 306 NPMGARLLRQWLQRPLLRAADITMRLDAVDEL-KKMKPFR-------------------- 344
Query: 497 QFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYR 556
SV LG+ D++R + RI A P E + G L + + +
Sbjct: 345 ------ESVCCDLGQISDLERALARIATLRAIPRE-------VRQLGSALAVIPLLKQSF 391
Query: 557 EKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEV 616
+ SK L S I A P + A + S V+ EA + + I G E+
Sbjct: 392 QDTVSKRLCS------IADALMP-LPDLVAMIESAVDPEAG--ASMRDGGYIRKGYHQEL 442
Query: 617 ARARKAVQSAKEELDSLINMCRKQ--LGMRNLEFMSVSGITHLIELPANFKVPLNWAKVN 674
R+ +AKE L + R++ +G ++F V G I KVP + K
Sbjct: 443 DDLRQTASTAKERLLEIQQEERERTAIGSLKVQFNRVFGYYIEISKANRDKVPPYYEKKQ 502
Query: 675 STKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALD 734
+ R+ P + +++ A E ++ + + + G+ Q +A +D
Sbjct: 503 TLVNAERFTIPALKEYEEKILNAEERSLVLEQQLFQALCCRIAGHAEVIQENAALIAEID 562
Query: 735 CLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNLHAERE 792
CL A A + + +P+ E + I +GRHPVL+ IL + ++ ND L +R+
Sbjct: 563 CLAAYAVCADEYGYCKPLIA---EHTGLRILNGRHPVLERILPADEPYIANDA-LFDDRQ 618
Query: 793 YCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGR 852
+ITGPNM GKS Y+RQ LI ++AQ G FVPA AE+ V+D I+TR+GASD++ G
Sbjct: 619 KMLMITGPNMAGKSSYLRQTGLIVLLAQAGCFVPAEQAEIGVVDRIFTRVGASDNLASGE 678
Query: 853 STFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVT 912
STFL E+NEA+ IL N TA+SL+++DE+GRGTST+DG+AIA++ +Y+ LF T
Sbjct: 679 STFLVEMNEAADILNNATAKSLLLLDEIGRGTSTYDGLAIAWSMCEYIHRQIGARTLFAT 738
Query: 913 HYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKV 972
HY ++A+++ G V Y+ S L +S V +L K+V G S++S+G +V
Sbjct: 739 HYHELAELEGLLPGVV-NYNASVL-----------ESGDRVIFLRKIVRGASDNSYGIEV 786
Query: 973 AQLAQLPPSCISRATVIAAKLE 994
A+++ +P + I+RA I A +E
Sbjct: 787 ARMSGMPSAVITRAKAILAGME 808
>sp|Q03834|MSH6_YEAST DNA mismatch repair protein MSH6 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSH6 PE=1 SV=1
Length = 1242
Score = 287 bits (734), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 266/1030 (25%), Positives = 444/1030 (43%), Gaps = 151/1030 (14%)
Query: 7 QVISRFFAPKSNQTTASSSASSPRPPQQTPPPKIAATVSFSPAKRKVVSSLFPPKTPKKP 66
Q SR + P +Q +A+S +S + + V A+R+ PK+ P
Sbjct: 247 QAPSRSYNPSHSQPSATSKSSKFNKQNE---ERYQWLVDERDAQRR-------PKS--DP 294
Query: 67 KLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMA 126
+ P TL IP+ + K+TP E+Q E+K+K D ++ + G F + +DA +A
Sbjct: 295 EYDPRTLY-IPSSAWN-----KFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDALLA 348
Query: 127 AKV--LGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAG 184
+ L I N A IP + + G+KV V Q E+ K G G
Sbjct: 349 NALFDLKIAGGGRANMQLAGIPEMSFEYWAAQFIQMGYKVAKVDQRESMLAKEMREGSKG 408
Query: 185 PFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGN------------VGKI 232
R L + T TL G+ + + + + ++ GN V K+
Sbjct: 409 IVKRELQCILTSGTL------TDGDMLHSDLATFCLAIREEPGNFYNETQLDSSTIVQKL 462
Query: 233 RNGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSK 291
+FG F ++ +TG++ EF D + L+ ++ + P E+++ + LS
Sbjct: 463 NTKIFGAAF--------IDTATGELQMLEFEDDSECTKLDTLMSQVRPMEVVMERNNLST 514
Query: 292 QTEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSL-YENMGED---TLSNNEDQNMD 347
K++ + P + A + + AE++S Y + ED L + D
Sbjct: 515 LANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEIISSEYFSTEEDWPEVLKSYYDTGKK 574
Query: 348 VPEQGNHRSAIEGIMNMPDLAVQALAL-TIRHLKQFGLERIMCLGASFRSLSGSMEMTLS 406
V SA G++ L +++++K++ + M L
Sbjct: 575 V-----GFSAFGGLLYYLKWLKLDKNLISMKNIKEYDF------------VKSQHSMVLD 617
Query: 407 ANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVS 466
TLQ LE+ N+ +GS+ GTL + N +T G R++++W+ HPL +N I +RLD+V
Sbjct: 618 GITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGKRMMKKWLMHPLLRKNDIESRLDSVD 677
Query: 467 EIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRT 526
+ + D+T+ E + + + PD++R + RI RT
Sbjct: 678 SLLQ-------------------DITLRE--------QLEITFSKLPDLERMLARIHSRT 710
Query: 527 ATPSEF---IAVMQAILYAGKQLQQLHIDGEYREKVTSKTLHSALLKRLILTASSPAVIG 583
+F I + I+ L+ + G+ + + +S P +
Sbjct: 711 IKVKDFEKVITAFETIIELQDSLKNNDLKGDVSKYI----------------SSFPEGLV 754
Query: 584 KAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGM 643
+A K S N + N+++ G E ++ +Q ++EL ++ RKQ
Sbjct: 755 EAVK--SWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELMEILMTYRKQFKC 812
Query: 644 RNLEFMSVSGITHLIELP--ANFKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEEL 701
N+++ + IE+P A VP NW ++ + K RY+S EV +A A E
Sbjct: 813 SNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEVRALARSMAEAKEIH 872
Query: 702 TIVCRAAWDSFLKEFGGYYAE-FQAAVQALAALDCLHALATLSR--NKNFVRPVFVDDHE 758
+ + ++F +Y + +QA++ +DCL A+ S RP VD+ +
Sbjct: 873 KTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLLAITRTSEYLGAPSCRPTIVDEVD 932
Query: 759 PVQ-------IHICSGRHPV--LDTILLDNFVPNDTNLHAEREYCQIITGPNMGGKSCYI 809
+ S RHP L +F+PND L E+ ++TG N GKS +
Sbjct: 933 SKTNTQLNGFLKFKSLRHPCFNLGATTAKDFIPNDIELGKEQPRLGLLTGANAAGKSTIL 992
Query: 810 RQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNC 869
R + IMAQ+G +VP SA L +D I TR+GA+D+I QG+STF EL E IL
Sbjct: 993 RMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKSTFFVELAETKKILDMA 1052
Query: 870 TAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVG 929
T +SL++VDELGRG S+ DG AIA + L ++ H + + F THY +A
Sbjct: 1053 TNRSLLVVDELGRGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLA----------- 1101
Query: 930 TYHVSYLTSHKVMGPMD-----SKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCIS 984
S H + P+ ++ ++VT+LYK++ G SE SFG VA + + I
Sbjct: 1102 ----SSFKHHPQVRPLKMSILVDEATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIID 1157
Query: 985 RATVIAAKLE 994
A + A LE
Sbjct: 1158 NAQIAADNLE 1167
>sp|Q7MXR7|MUTS_PORGI DNA mismatch repair protein MutS OS=Porphyromonas gingivalis (strain
ATCC BAA-308 / W83) GN=mutS PE=3 SV=1
Length = 891
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 275/990 (27%), Positives = 465/990 (46%), Gaps = 155/990 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMTAS 144
TPL +Q ++K K+PD +L+ VG + F EDA +A+++LGI N A
Sbjct: 8 TPLMRQYFQIKQKHPDAILLFRVGDFYETFSEDAIVASEILGITLTRRANGAAQFVELAG 67
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPF-GRGLSALYTKATLEAAE 203
P L+ ++ +LV AG +V + Q E P K RG++ L T + +
Sbjct: 68 FPHHALDTYLPKLVRAGKRVAICDQLED-------PKKTKTLVKRGITELVTPG-VSTND 119
Query: 204 DVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFN 263
+V + E+N+L V + GK VFG + ++ISTG+ + G+ N
Sbjct: 120 NVLSHK-----ENNFLAAV-----SCGK---EVFG--------ISLLDISTGEFMAGQGN 158
Query: 264 DGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGAL 323
++ E +L + P E+L+ +++E+ D F G +
Sbjct: 159 ADYV----EKLLTNYRPKEILV-----ERSER---------------SRFNDLFHWSGFI 194
Query: 324 AEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHL---K 380
++ ED ++E+ + V + + +S + +AV A + +L +
Sbjct: 195 FDM--------EDWAFSSENNRLRVLKHFDLKSLKGFGLEELSMAVTAAGAVLNYLDLTQ 246
Query: 381 QFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYG 440
L+ I L L + + L T++ LE+L + G + +LL I++HT+T G
Sbjct: 247 HHQLQHITSLS----RLDENRYVRLDKFTVRSLELLSPMNEGGK--SLLDIIDHTITPMG 300
Query: 441 SRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYY 500
+R +R+W+ PL D I AR R E +H E+ +
Sbjct: 301 ARRIRQWIVFPLKDPARIQAR-------------QRVVEFFFRHPEERA----------- 336
Query: 501 ILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQL--HIDGEYREK 558
I++ LT +G D++R +T+ +P E + ++ L A + ++++ H D E
Sbjct: 337 IIAEHLTEIG---DLERLVTKGAMGRISPREMVQ-LRVALQALEPIKEVCTHADEENLRT 392
Query: 559 VTSKTLHSALLKRLIL---TASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSE 615
+ K L+ IL +PA +G+ +I++G +
Sbjct: 393 LGGKLELCKELRDKILREVMPDAPAALGRGP--------------------VIAHGVDAT 432
Query: 616 VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFK--VPLNWAKV 673
+ R S K+ L L ++ G+ +L+ + + IE+ K VP W +
Sbjct: 433 LDELRALAYSGKDYLIKLQQQEIERTGIPSLKVAYNNVFGYYIEVRNTHKDKVPAEWIRK 492
Query: 674 NSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAAL 733
+ RY + E+ ++ A E++ + + + E Y A Q QA+A+L
Sbjct: 493 QTLVSAERYITEELKEYEAKILGAEEKIAALEGQLYALLVAELQRYVAPLQQDSQAVASL 552
Query: 734 DCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDN--FVPNDTNLHAER 791
DCL + A +R F+ PV VD E I I +GRHPV++ L + ++ ND L +R
Sbjct: 553 DCLLSFAESARRYRFICPV-VD--ESFTIDIKAGRHPVIEQQLPADEPYIANDIYLDTDR 609
Query: 792 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 851
+ I+TGPNM GKS +RQ ALI +MAQ+GSFVPA SA + ++D I+TR+GASD+I G
Sbjct: 610 QQVIIVTGPNMSGKSALLRQTALISLMAQIGSFVPAESARIGMVDSIFTRVGASDNISMG 669
Query: 852 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKC--MVL 909
STF+ E+ EAS IL N T +SLV+ DELGRGTST+DG++IA++ ++Y+ ++ K L
Sbjct: 670 ESTFMVEMQEASNILNNLTPRSLVLFDELGRGTSTYDGISIAWSIVEYIHDNPKAHPRTL 729
Query: 910 FVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFG 969
F THY ++ +++ G + H +++ +V G M +L K+ PG S SFG
Sbjct: 730 FATHYHELNELE----GQLDRVHNFNVSAREVDGKM--------LFLRKLEPGGSAHSFG 777
Query: 970 FKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMP--- 1026
+VA+L +P + RAT I +LE E + +D S++ + A +P
Sbjct: 778 IQVARLGGMPHHIVQRATDILHRLEQEREKIEEEEPKTKDTKRGPSEKVKNASPTLPRDE 837
Query: 1027 --VSPESFYLGRVEASEDLISAYRDLFLNL 1054
S + + L + + ++S R+ L+L
Sbjct: 838 KGRSIDGYQLSFFQLDDPVLSQIREEILDL 867
>sp|P54276|MSH6_MOUSE DNA mismatch repair protein Msh6 OS=Mus musculus GN=Msh6 PE=1 SV=3
Length = 1358
Score = 284 bits (726), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 272/1010 (26%), Positives = 436/1010 (43%), Gaps = 146/1010 (14%)
Query: 61 KTPKKPKLSPHTLNPIPTPSSQTTHNKKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFG 120
+ P P+ +P TL +P + TP ++ +LK++ D+++ +VG + +
Sbjct: 383 RRPDHPEFNPTTLY-VPEEFLNSC-----TPGMRKWWQLKSQNFDLVIFYKVGKFYELYH 436
Query: 121 EDAEMAAKVLGIYAHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIK---- 176
DA + LG+ + N+ + P LV G+KV V+QTET +
Sbjct: 437 MDAVIGVSELGLI-FMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARC 495
Query: 177 ---AHGPGKAGPFGRGLSALYTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIR 233
AH R + + TK T + G D S YL+ + + +
Sbjct: 496 RKMAHVSKFDRVVRREICRIITKGTQTYSVLDG---DPSENYSRYLLSLKEKEEETS--- 549
Query: 234 NGVFGDGFDVRLGVVAVEISTGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQP-LSKQ 292
G GV V+ S G G+F+D S ++ P ++L + LS +
Sbjct: 550 ------GHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILFEKGNLSTE 603
Query: 293 TEKMLLAYAGPASNVRVECASRDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQG 352
T+ +L G S+ C G +L + + N D + +P
Sbjct: 604 TKTVL---KGSLSS----CLQEGLIPGSQFWDATKTLRTLLEGGYFTGNGDSSTVLP--- 653
Query: 353 NHRSAIEGIMNMPD-----------LAVQALALTIRHLKQFGLERIMCLGASFRSL---- 397
++G+ + D LA+ AL + +LK+ +++ + A+F
Sbjct: 654 ---LVLKGMTSESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLD 710
Query: 398 --------------SGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRL 443
S M L A TL LE+ N +NGS GTLL ++ T +G RL
Sbjct: 711 SDTVSTVKPGAVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRL 770
Query: 444 LRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILS 503
L++W+ PLC + IS RLDAV ++ + P ++
Sbjct: 771 LKQWLCAPLCSPSAISDRLDAVEDL------------------------MAVPDKVTEVA 806
Query: 504 SVLTSLGRSPDIQRGITRIFHRTATP--SEFIAVMQAILYAGKQLQQLHI-------DG- 553
+L L PD++R +++I H +P S+ +AI+Y + I +G
Sbjct: 807 DLLKKL---PDLERLLSKI-HNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGF 862
Query: 554 -----------EYREKVTSKTLHSAL-LKRLILTASSPAVIGKAAKLLSTVNKEAADQGD 601
E TSKTL + L+ P + + + + + E A +
Sbjct: 863 KVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTG 922
Query: 602 LLNLMIISNGQFSE-VARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIEL 660
L+ + + + +A R+ QS E LD R +LG +++ + + + +E+
Sbjct: 923 LITPKAGFDSDYDQALADIRENEQSLLEYLDKQ----RSRLGCKSIVYWGIGRNRYQLEI 978
Query: 661 PANF---KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFG 717
P NF +P + ++ K RY + + L L A E + F
Sbjct: 979 PENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFCNFD 1038
Query: 718 GYYAEFQAAVQALAALDCLHALATLSRNKN--FVRPVFV---DDHEPVQIHICSGRHPVL 772
+ ++Q+AV+ +A LD L LA S+ + RP V +D P + RHP +
Sbjct: 1039 KNHKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIVLPGEDTHPF-LEFKGSRHPCI 1097
Query: 773 -DTILLDNFVPNDTNLHAERE-------YCQIITGPNMGGKSCYIRQVALIGIMAQVGSF 824
T D+F+PND + E E YC ++TGPNMGGKS IRQ L+ +MAQ+G +
Sbjct: 1098 TKTFFGDDFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKSTLIRQAGLLAVMAQLGCY 1157
Query: 825 VPASSAELHVLDGIYTRMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGT 884
VPA L +D ++TR+GASD I G STF EL+E + ILR+ TA SLV+VDELGRGT
Sbjct: 1158 VPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDELGRGT 1217
Query: 885 STHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGP 944
+T DG AIA A + L E KC LF THY + + +K + V H++ + ++ P
Sbjct: 1218 ATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSK-SVCVRLGHMACMVENECEDP 1276
Query: 945 MDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
S + +T+LYK + G S+GF A+LA LP I + A + E
Sbjct: 1277 ----SQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFE 1322
>sp|Q0AYB5|MUTS_SYNWW DNA mismatch repair protein MutS OS=Syntrophomonas wolfei subsp.
wolfei (strain Goettingen) GN=mutS PE=3 SV=1
Length = 859
Score = 283 bits (725), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 256/926 (27%), Positives = 427/926 (46%), Gaps = 132/926 (14%)
Query: 89 YTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHNFMTASIPTF 148
YTP+ QQ +++K + D +L +G + F EDA +A++ L I + IP
Sbjct: 4 YTPMMQQYLQIKEEQQDAILFFRLGDFYEMFFEDARIASRELEIVLTARDGGAGSKIPMC 63
Query: 149 RLNVH-----VRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEAA 202
+ H + RL+N G+KV + +Q E P +A G R ++ + T T+
Sbjct: 64 GVPYHSVDNYLARLINRGYKVAICEQVED-------PREAKGIVKREVTRIVTPGTIIEE 116
Query: 203 EDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEF 262
+ + ++ N+L V ++ + G+ ++ISTG+ E
Sbjct: 117 QLLDQAKN------NFLAAVEEEP----------------LCTGIAYIDISTGEFWLSEI 154
Query: 263 NDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGA 322
RS +E+ +L +SPAE LLA +G + E R I
Sbjct: 155 AGENARSRVESEILRISPAE-------------CLLAGSGSLTGSWEEEWLRQQNITLTV 201
Query: 323 LAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQF 382
E+ E L + +++ ++ + I+ + + +++H+K
Sbjct: 202 WDELPLSLERAESLLLRQLQVASLESFGLKSYSAGIKAAARIIAFLEETQKTSLQHIK-- 259
Query: 383 GLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSR 442
S R S + + + + LE+ G G+LL I++ + T G R
Sbjct: 260 ----------SLRCYSSDNFLEMDFYSRRNLELTATLREGKREGSLLSILDESRTAMGKR 309
Query: 443 LLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYIL 502
LLRRW+ PL + I RLDAV E+ ++ S RT L
Sbjct: 310 LLRRWIEQPLREAGEIEERLDAVDELKNTL-SLRTE-----------------------L 345
Query: 503 SSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSK 562
+ +L+ R D++R +I A+P + + + ++ + L +
Sbjct: 346 TPLLS---RINDLERLGGKIGASVASPRDLLGLKSSLAVINDIKKAL------------Q 390
Query: 563 TLHSALLKRLILTASSPAVIGKAAKLLSTVNKEA---ADQGDLLNLMIISNGQFSEVARA 619
S +L+RL A+ A+ A + +++N EA +G+L I G E+
Sbjct: 391 PCRSEILQRL---AAMDALEEVFALIDASINDEAPLGIKEGEL-----IKTGYKQEIDEL 442
Query: 620 RKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANFKV-PLNWAKVNS 675
R+ Q L N +++ G++NL+ F V G + IE+ +N + P ++ + +
Sbjct: 443 RELSQEGSNWLVEFENREKQRTGIKNLKVGFNKVFG--YYIEITKSNLSLAPADYHRKQT 500
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
+ R+ S E+ +++ + E L + + + Y A+A LD
Sbjct: 501 LVNSERFISDELKQYEEKILGSRERLYSLEYQEFIKIREALIPYLPRVMETAHAIAILDV 560
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLD-NFVPNDTNLHAEREYC 794
L LA ++ N++RP +D+ +I I +GRHPV++ L + FVPND L ++
Sbjct: 561 LQGLAEVAYQNNYIRPE-IDNSG--KIRIRAGRHPVVEKALREARFVPNDLQLDRDKARF 617
Query: 795 QIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRST 854
IITGPNMGGKS ++RQ AL+ +MAQ+GSF+PA A + ++D I+TR+GASD + G+ST
Sbjct: 618 AIITGPNMGGKSTFMRQAALLVLMAQMGSFIPAEEARIGLVDKIFTRVGASDDLAAGQST 677
Query: 855 FLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHY 914
F+ E+ E + IL N + SLVI+DE+GRGTST+DG++IA A +YLLE+ + VLF THY
Sbjct: 678 FMVEMIEVANILNNASDNSLVILDEIGRGTSTYDGLSIAQAVSEYLLENSRSKVLFATHY 737
Query: 915 PKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQ 974
++ + K G + VS ++ V +L KV+PG ++ S+G VA+
Sbjct: 738 HQLTRLAEKLPGII-NLSVSV-----------KETGNTVVFLKKVLPGKADKSYGLHVAR 785
Query: 975 LAQLPPSCISRATVIAAKLEAEVSSR 1000
LA LP I RA I LE SR
Sbjct: 786 LAGLPEKLIIRAEDILQGLEKNKDSR 811
>sp|B8CX98|MUTS_HALOH DNA mismatch repair protein MutS OS=Halothermothrix orenii (strain
H 168 / OCM 544 / DSM 9562) GN=mutS PE=3 SV=1
Length = 896
Score = 283 bits (724), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 264/936 (28%), Positives = 431/936 (46%), Gaps = 165/936 (17%)
Query: 88 KYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAHLDHN-----FMT 142
K TP+ QQ +K KY D +L +G + F +DA++AA+ L + +
Sbjct: 3 KLTPMMQQYQSIKNKYKDAILFFRLGDFYEMFNDDAKIAARELDLALTARNKGGGEKAPM 62
Query: 143 ASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKA-GPFGRGLSALYTKATLEA 201
A +P ++ +L+ G+KV + +Q E P +A G R + + T T+
Sbjct: 63 AGVPCHSAESYIAKLLEKGYKVAICEQIE-------DPSEAKGLVSREVVRIITPGTIIE 115
Query: 202 AEDVGGGEDGCGGESNYL---VCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVV 258
E + E+ NYL +C D LG V+ISTG+
Sbjct: 116 NEMLKDKEN------NYLASAICYKD-------------------HLGFSYVDISTGEFY 150
Query: 259 YGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSK------QTEKMLLAYAGPASNVRVECA 312
+F+ F + L + P E+++ + L + + ++M Y + R+E
Sbjct: 151 VTQFSQKFSDKVWDE-LDRIQPREVIICKELEETENFADKKKQMNFVY----NYSRIEKV 205
Query: 313 SRDCFIGGGALAEVMSLYENMGEDTLSN--NEDQNMDVPEQGNHRSAIEGIMNMPDLAVQ 370
A L E+ ++LS ED+ + G E I + D +
Sbjct: 206 K----------AAYNFLLEHFKTNSLSGFGCEDKPAAILAAG------EIINFLKDTQKR 249
Query: 371 ALALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L I + + L M L ++ R ++E+T +R N + G+LL+
Sbjct: 250 TLE-HINRITTYNLTDYMVLDSATRY---NLELT---------STIRGNKHK---GSLLN 293
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++ T+T G RL+++W+ PL DRN I RLDAV E+ +
Sbjct: 294 VLDQTITSMGGRLIKKWINQPLIDRNKIETRLDAVEELVNN------------------- 334
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLH 550
Y +L + L D++R + ++ + +A + A+ +IL +L Q+
Sbjct: 335 --------YLLLQEIREHLKGIYDLERILGKVSYGSANARDLAALKYSIL----KLPQIK 382
Query: 551 IDGEYREKVTSKTLHSALLKRLILTASSPAVIGKAAKLLSTVNKE---AADQGDLLNLMI 607
D E K +H +I A L ++ E + +G L
Sbjct: 383 KDLEQLNTKLFKNMHETF----------DPLIDLAGLLDRSIVDEPPVSVREGGL----- 427
Query: 608 ISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIEL-PANF 664
I +G SE+ RKA K+ + +L R++ G+ +L+ F V G + IE+ AN
Sbjct: 428 IKDGYSSELDELRKARTEGKDWIANLQKTERERTGISSLKVGFNKVFG--YYIEITKANL 485
Query: 665 -KVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKE---FGGYY 720
+VP N+ + + + R+ +PE L + L L EE + + F+K
Sbjct: 486 DRVPDNYTRKQTLSNSERFITPE-LKEKEALVLGAEEK--INDLEYKLFVKIRDIVRDNI 542
Query: 721 AEFQAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNF 780
+ ++ LD L +LA + +++ RP +D I I GRHPV++ + F
Sbjct: 543 KRIKKTAAIISKLDVLTSLAQNALERDYNRPRINNDG---VIEIIKGRHPVVEDMGKGAF 599
Query: 781 VPNDTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYT 840
VPNDT L E E IITGPNM GKS Y+RQVALI +MAQ+GSFVPA A + ++D I+T
Sbjct: 600 VPNDTYLDLEEERFIIITGPNMSGKSTYMRQVALIVLMAQMGSFVPADKATIGIVDRIFT 659
Query: 841 RMGASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYL 900
R+GASD + G+STF+ E+NE + I+ N T SL+I+DE+GRGTST+DG++IA+A +Y+
Sbjct: 660 RVGASDDLTTGQSTFMVEMNEVANIVNNATRNSLIILDEVGRGTSTYDGLSIAWAVSEYI 719
Query: 901 LEHKK--CMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYK 958
+ LF THY ++ ++ + + Y+V + + + V +L+K
Sbjct: 720 NNPDRIGARTLFATHYHELTQLENR--PGIKNYNV-----------LVEEDEDGVHFLHK 766
Query: 959 VVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLE 994
++PG + S+G +VAQLA LP I RA I A+LE
Sbjct: 767 IIPGKASESYGIEVAQLAGLPMEIIIRAQEILAELE 802
>sp|A9KG24|MUTS_COXBN DNA mismatch repair protein MutS OS=Coxiella burnetii (strain Dugway
5J108-111) GN=mutS PE=3 SV=1
Length = 859
Score = 281 bits (718), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 254/939 (27%), Positives = 422/939 (44%), Gaps = 149/939 (15%)
Query: 81 SQTTHN--KKYTPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIY----- 133
S TT N ++TP+ +Q + +K +YPD+L+ +G + F +DA+ AAK+L I
Sbjct: 7 SPTTQNDFSQHTPMMRQYLRIKAEYPDLLVFYRMGDFYELFYDDAKKAAKLLNITLTARG 66
Query: 134 AHLDHNFMTASIPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSAL 193
H A +P + ++ +LV G V + +Q A GP R ++ +
Sbjct: 67 QSAGHAIPMAGVPYHAVENYLTKLVRLGESVVICEQIGDPATSK------GPVAREVTRI 120
Query: 194 YTKATLEAAEDVGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEIS 253
T T+ + D N L+ + + R G+ ++I+
Sbjct: 121 ITPGTVSDEALLDEHRD------NTLMVIHQEKD----------------RFGIATLDIT 158
Query: 254 TGDVVYGEFNDGFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECAS 313
+G + E + L A + + PAELL+ + S K A +++
Sbjct: 159 SGRFLIQEI---ISENALFAEIERIRPAELLISEENSVHPLK--------ADSIKRRPPW 207
Query: 314 RDCFIGGGALAEVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQA-- 371
F AL + ++ D GI ++P LA+ A
Sbjct: 208 E--FDHATALTLLCQQFQTKSLDGF---------------------GITHLP-LAITAAG 243
Query: 372 -LALTIRHLKQFGLERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLH 430
L + + ++ L I + A + + ANT + LE++ N G E +L
Sbjct: 244 CLLQYVNYTQKSALPHIHSIQAE----QNEEALFIDANTRRNLELI-TNLQGEEVHSLAW 298
Query: 431 IMNHTLTIYGSRLLRRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSD 490
+++HT T GSRLLRRW+ PL D+ L+ R +AVS
Sbjct: 299 LLDHTATPMGSRLLRRWINRPLRDQILLQQRQNAVS------------------------ 334
Query: 491 VTIVEPQFYYILSSVLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAI---LYAGKQLQ 547
T++E + Y S + +L D++R + RI R+A P + + + QA+ +QL
Sbjct: 335 -TLLEKRNY---SEIYENLRHIGDLERIVARIALRSARPRDLMQLRQALGVLPTLHQQLT 390
Query: 548 QLHIDGEYREKVTSKTLHSALLKRL--ILTASSPAVIGKAAKLLSTVNKEAADQGDLLNL 605
L ++ + +E + L L + L + + P VI D G
Sbjct: 391 NLPLNKQLQEIKNNLGLFDELFRLLQKAIIENPPIVI--------------RDGG----- 431
Query: 606 MIISNGQFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLE--FMSVSGITHLIELPAN 663
+I++G + + R ++ + L L R++ + L+ + + G I
Sbjct: 432 -VIADGYDAPLDELRNMSTNSHQFLIDLEQQERERTKINTLKVGYNRIHGYYIEISRAQA 490
Query: 664 FKVPLNWAKVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEF 723
+ P + + + K RY +PE+ D++ + + ++ L
Sbjct: 491 KQAPTEYIRRQTLKNVERYITPELKIFEDKVLSSRSRALAREKELYEQLLDTLIEKLIPL 550
Query: 724 QAAVQALAALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPN 783
Q A+A LD L+ LA + NF P F D P+ I I +GRHP+++ ++ D F+PN
Sbjct: 551 QQCASAIANLDVLNTLAERADTLNFNAPQFCD--YPI-IKIEAGRHPIVENVMTDPFMPN 607
Query: 784 DTNLHAEREYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMG 843
DT+L +R IITGPNMGGKS Y+RQ ALI ++A +GSFVPA +A+L +D I+TR+G
Sbjct: 608 DTHLDEKRRML-IITGPNMGGKSTYMRQTALITLLAYIGSFVPAKNAQLGPIDRIFTRIG 666
Query: 844 ASDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH 903
A+D + GRSTF+ E+ E + IL N T +SLV++DE+GRGTST DG+++AYA YL
Sbjct: 667 AADDLASGRSTFMVEMTETAAILHNATEESLVLMDEVGRGTSTFDGLSLAYACASYLATK 726
Query: 904 KKCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGV 963
K LF THY ++ + + +V H+ + + ++ + +L+ + G
Sbjct: 727 LKAFALFATHYFELTALASTLP-AVKNVHLDAV-----------EHEEKIIFLHALREGP 774
Query: 964 SESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQ 1002
+ S+G +VAQLA +P S I A +LE V S Q
Sbjct: 775 ANKSYGLQVAQLAGIPRSVIQHARQKLEELENPVISETQ 813
>sp|A6LG92|MUTS_PARD8 DNA mismatch repair protein MutS OS=Parabacteroides distasonis
(strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=mutS PE=3
SV=1
Length = 870
Score = 280 bits (715), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 256/925 (27%), Positives = 430/925 (46%), Gaps = 146/925 (15%)
Query: 90 TPLEQQVVELKTKYPDVLLMIEVGYKFRFFGEDAEMAAKVLGIYAH-----LDHNFMTAS 144
TPL +Q ++K K+PD +L+ VG + +GEDA + A++LGI + + A
Sbjct: 7 TPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVIGAEILGIVQTKRANGVGQHVEMAG 66
Query: 145 IPTFRLNVHVRRLVNAGFKVGVVKQTETAAIKAHGPGKAGPFGRGLSALYTKATLEAAED 204
P L+ ++ +LV AG +V + Q E + RG++ L T + ++
Sbjct: 67 FPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKK------LVKRGITELVTPG-VSINDN 119
Query: 205 VGGGEDGCGGESNYLVCVVDDDGNVGKIRNGVFGDGFDVRLGVVAVEISTGDVVYGEFND 264
+ + E+N+L + V G F ++ISTG+ + E +
Sbjct: 120 ILNHK-----ENNFLASI--------HFAKEVCGISF--------LDISTGEFMTAEGSI 158
Query: 265 GFLRSGLEAVLLSLSPAELLLGQPLSKQTEKMLLAYAGPASNVRVECASRDCFIGGGALA 324
++ + +L + SP E+L+ + K+ E+ GP R D +I
Sbjct: 159 DYI----DKLLNNFSPKEVLIERGNKKRFEEAF----GP----RFFIFELDDWIF----- 201
Query: 325 EVMSLYENMGEDTLSNNEDQNMDVPEQGNHRSAIEGIMNMPDLAVQALALTIRHLKQFGL 384
T S ED+ + E N + G+ ++ L + A + +L Q
Sbjct: 202 ------------TTSAAEDRLLKHFETKNLKGF--GVQHLK-LGIIASGAILYYLDQTQH 246
Query: 385 ERIMCLGASFRSLSGSMEMTLSANTLQQLEVLRNNSNGSEYGTLLHIMNHTLTIYGSRLL 444
I + A R + + L T++ LE++ + E +LL +++ T++ GSR+L
Sbjct: 247 THISHITALSR-IEEDRYVRLDKFTVRSLELV--GTMNDEGTSLLDVIDKTISPMGSRML 303
Query: 445 RRWVTHPLCDRNLISARLDAVSEIAESMGSYRTSESVGQHDEKNSDVTIVEPQFYYILSS 504
RRW+ PL D I R + V D EP+ +L +
Sbjct: 304 RRWILFPLKDVKPIQERQEVV------------------------DYFFREPETKELLDT 339
Query: 505 VLTSLGRSPDIQRGITRIFHRTATPSEFIAVMQAILYAGKQLQQLHIDGEYREKVTSKTL 564
L +G D++R I+++ +P E + + A+ + GE + L
Sbjct: 340 QLEQIG---DLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACMASGEPSLCRIGEQL 396
Query: 565 HS-ALLKRLI---LTASSPAVIGKAAKLLSTVNKEAADQGDLLNLMIISNGQFSEVARAR 620
++ AL++ I + P+++ K + VN+E D R
Sbjct: 397 NACALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDD--------------------LR 436
Query: 621 KAVQSAKEELDSLINMCRKQL---GMRNLE--FMSVSGITHLIELPANFKVPLNWAKVNS 675
S K D L+ + ++++ G+ +L+ F +V G + KVP NW + +
Sbjct: 437 AIAYSGK---DYLLKVQQREIELTGIPSLKIAFNNVFGYYIEVRNTHKDKVPANWIRKQT 493
Query: 676 TKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALAALDC 735
RY + E+ +++ A E++ + ++ + Y Q + +DC
Sbjct: 494 LVNAERYITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRIDC 553
Query: 736 LHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILL--DNFVPNDTNLHAEREY 793
L + A + ++RPV D +I I GRHPV++ L + ++ ND L E++
Sbjct: 554 LLSFAKAAEANKYIRPVVSDSD---KIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQ 610
Query: 794 CQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQGRS 853
IITGPNM GKS +RQ ALI +MAQ+G FVPA SA + ++D I+TR+GASD+I G S
Sbjct: 611 IIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGES 670
Query: 854 TFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEH--KKCMVLFV 911
TF+ E+NEAS IL N T++SLV+ DELGRGTST+DG++IA+A ++Y+ EH K LF
Sbjct: 671 TFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFA 730
Query: 912 THYPKIADIKTKFTGSVGTYHVSYLTSHKVMGPMDSKSDQDVTYLYKVVPGVSESSFGFK 971
THY ++ +++ F + Y+VS K +G V +L K++PG SE SFG
Sbjct: 731 THYHELNEMERAFK-RIKNYNVSV----KEVG-------NKVIFLRKLIPGGSEHSFGIH 778
Query: 972 VAQLAQLPPSCISRATVIAAKLEAE 996
VA++A +P S + R+ I +LE+E
Sbjct: 779 VAKMAGMPKSIVKRSNEILKQLESE 803
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 386,999,526
Number of Sequences: 539616
Number of extensions: 16673667
Number of successful extensions: 60741
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 55020
Number of HSP's gapped (non-prelim): 3391
length of query: 1083
length of database: 191,569,459
effective HSP length: 128
effective length of query: 955
effective length of database: 122,498,611
effective search space: 116986173505
effective search space used: 116986173505
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)