Query 001406
Match_columns 1083
No_of_seqs 601 out of 4772
Neff 6.5
Searched_HMMs 29240
Date Tue Mar 26 16:32:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001406.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_708-712//hhsearch_pdb/001406hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 1.0 1 1 287.7 29.7 296 528-855 16-320 (437)
2 1n11_A Ankyrin; clathrin, BAND 1.0 1 1 284.2 29.6 294 530-855 84-386 (437)
3 4g8k_A 2-5A-dependent ribonucl 1.0 1 1 269.0 23.8 280 528-833 27-329 (337)
4 3utm_A Tankyrase-1; tankyrase, 1.0 1 1 253.9 26.2 281 529-831 27-335 (351)
5 1wdy_A 2-5A-dependent ribonucl 1.0 1 1 251.9 25.9 257 529-806 8-283 (285)
6 2fo1_E LIN-12 protein; beta-ba 1.0 1 1 250.2 18.9 247 529-795 97-370 (373)
7 3ljn_A Hypothetical protein; a 1.0 1 1 244.9 16.7 222 527-797 21-270 (364)
8 4g8k_A 2-5A-dependent ribonucl 1.0 1 1 243.2 25.2 246 529-797 62-327 (337)
9 3d9h_A CDNA FLJ77766, highly s 1.0 1 1 239.3 18.8 250 529-830 18-279 (285)
10 4b93_B Ankyrin repeat domain-c 1.0 1 1 238.5 14.5 221 527-791 12-239 (269)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=287.66 Aligned_cols=296 Identities=13% Similarity=0.123 Sum_probs=228.4
Q ss_pred CCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf 2331535049906899999869986668999989713789995699645313330002789997655788998026779-
Q 001406 528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL- 606 (1083)
Q Consensus 528 ~~~~~ac~fGdveVv~~LLq~GvlrC~~p~~~~G~tPL~iA~~ng~~cseVv~feyl~~~~a~in~~d~~g~~~t~l~l- 606 (1083)
+.+++||.+|+++++..|++.|+. .+..+..|.||||+|+.+|+ .+++. +++..+++++..+..| .+++|+
T Consensus 16 t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~~~~~~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A 87 (437)
T 1n11_A 16 TPLHVASFMGHLPIVKNLLQRGAS--PNVSNVKVETPLHMAARAGH--TEVAK--YLLQNKAKVNAKAKDD--QTPLHCA 87 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC--SCCSSSCCCCHHHHHHHHTC--HHHHH--HHHHHTCCSSCCCTTS--CCHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHH
T ss_conf 889999987899999999986999--99888899879999998197--99999--9995899999879999--9899999
Q ss_pred ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHH
Q ss_conf ----8999999980999986776460209999999527306789998751299876675742139999999982699999
Q 001406 607 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLL 682 (1083)
Q Consensus 607 ----~lrivkLLl~~g~~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~~ad~n~~s~~~~~~~~l~~~a~~~~~~~lv 682 (1083)
+..++++|+..++..+..+..|.+++|+|+..++. +.+.+|++.+.+.+..+.. +.++++.+...++..++
T Consensus 88 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~~~---g~t~L~~A~~~g~~~~v 162 (437)
T 1n11_A 88 ARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV--ETVLALLEKEASQACMTKK---GFTPLHVAAKYGKVRVA 162 (437)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCH--HHHHHHHHTTCCSCCCCTT---SCCHHHHHHHTTCHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCC---CCCHHHHHHHCCCHHHH
T ss_conf 987989999999967999887799998599999985999--9999999679987677999---98799999976989999
Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 99996899998557999939999998299888999996799952038999977789998299999999996599999888
Q 001406 683 RKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 762 (1083)
Q Consensus 683 ~~Lle~Gadvn~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~t 762 (1083)
++|++.|++++..+..|.||||+|+..|+.+++++|+..|++++..+..|+||||+|+..|+.+++++|+.+|++++.
T Consensus 163 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-- 240 (437)
T 1n11_A 163 ELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA-- 240 (437)
T ss_dssp HHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC--
T ss_conf 999967999877789998889999981999999999847999887677899889999986989999999976999888--
Q ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHCCCCCCCCCCC
Q ss_conf 9999999999899999984999999999982797534467568898996999889----999999998227999999963
Q 001406 763 DPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDES 838 (1083)
Q Consensus 763 d~~~kD~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~~adln~~d~~g~tal~~a~----~~~v~~Lle~~a~~~a~~~~e 838 (1083)
++..|.||||+|+..|+.+++++|++.+++ ++..+..+.||++.+. ...++.|++.++..+.
T Consensus 241 ----~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~----- 306 (437)
T 1n11_A 241 ----ESVQGVTPLHLAAQEGHAEMVALLLSKQAN-----GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA----- 306 (437)
T ss_dssp ----CCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-----
T ss_pred ----CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC-----
T ss_conf ----798999799999977889999999966999-----998799999799999984999999999848756788-----
Q ss_pred CCCCCCCCHHHHHHHHH
Q ss_conf 10001110019888876
Q 001406 839 DVLSLKDSLTAICNATQ 855 (1083)
Q Consensus 839 ~~~~lkdsltal~~Aaq 855 (1083)
..+.+.||++.|+.
T Consensus 307 ---~~~~g~t~L~~A~~ 320 (437)
T 1n11_A 307 ---TTRMGYTPLHVASH 320 (437)
T ss_dssp ---CCSSCCCHHHHHHH
T ss_pred ---CCCCCCCHHHHHHH
T ss_conf ---79999889999998
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=284.17 Aligned_cols=294 Identities=16% Similarity=0.141 Sum_probs=182.3
Q ss_pred CCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf 31535049906899999869986668999989713789995699645313330002789997655788998026779---
Q 001406 530 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--- 606 (1083)
Q Consensus 530 ~~~ac~fGdveVv~~LLq~GvlrC~~p~~~~G~tPL~iA~~ng~~cseVv~feyl~~~~a~in~~d~~g~~~t~l~l--- 606 (1083)
+++||..|+.+++..|++.|+. .+..+..|.||||+|+.+++ .+++. +++..+++.+..+..| .+++|+
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~~~~~~~~~~~g--~t~L~~A~~ 155 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNAN--PNLATTAGHTPLHIAAREGH--VETVL--ALLEKEASQACMTKKG--FTPLHVAAK 155 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC--TTCCCTTCCCHHHHHHHHTC--HHHHH--HHHHTTCCSCCCCTTS--CCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHHHH
T ss_conf 9999987989999999967999--88779999859999998599--99999--9996799876779999--879999997
Q ss_pred --HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHH
Q ss_conf --899999998099998677646020999999952730678999875129987667574213999999998269999999
Q 001406 607 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK 684 (1083)
Q Consensus 607 --~lrivkLLl~~g~~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~~ad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~ 684 (1083)
+.+++++|+..+...+..+..|.+++|+|+..++. +.+++|++.+.+.+..+..+ .++++.+...+...+++.
T Consensus 156 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~~~~~g---~t~L~~A~~~~~~~~~~~ 230 (437)
T 1n11_A 156 YGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL--DIVKLLLPRGGSPHSPAWNG---YTPLHIAAKQNQVEVARS 230 (437)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCH--HHHHHHGGGTCCSCCCCTTC---CCHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCC---CCHHHHHHHCCCHHHHHH
T ss_conf 6989999999967999877789998889999981999--99999984799988767789---988999998698999999
Q ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99689999855799993999999829988899999679995203899997778999829999999999659999988899
Q 001406 685 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP 764 (1083)
Q Consensus 685 Lle~Gadvn~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~td~ 764 (1083)
|++.|++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 231 Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---- 306 (437)
T 1n11_A 231 LLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA---- 306 (437)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC----
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC----
T ss_conf 9976999888798999799999977889999999966999998799999799999984999999999848756788----
Q ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999999899999984999999999982797534467568898996999889----99999999822799999996310
Q 001406 765 SPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDV 840 (1083)
Q Consensus 765 ~~kD~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~~adln~~d~~g~tal~~a~----~~~v~~Lle~~a~~~a~~~~e~~ 840 (1083)
+|..|.||||+|+..|+.+++++|+++|+ +++.++..|.||++.+. .++++.|++.+++++.
T Consensus 307 --~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-----d~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~------- 372 (437)
T 1n11_A 307 --TTRMGYTPLHVASHYGNIKLVKFLLQHQA-----DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE------- 372 (437)
T ss_dssp --CCSSCCCHHHHHHHSSCSHHHHHHHHTTC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC-------
T ss_pred --CCCCCCCHHHHHHHCCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCC-------
T ss_conf --79999889999998694999999996699-----9998899998899999987819999999977689988-------
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 001110019888876
Q 001406 841 LSLKDSLTAICNATQ 855 (1083)
Q Consensus 841 ~~lkdsltal~~Aaq 855 (1083)
..+++.||++.|..
T Consensus 373 -~~~~g~t~l~~A~~ 386 (437)
T 1n11_A 373 -VSSDGTTPLAIAKR 386 (437)
T ss_dssp -CCSSSCCHHHHHHH
T ss_pred -CCCCCCCHHHHHHH
T ss_conf -78998989999988
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=1.00 E-value=1 Score=268.96 Aligned_cols=280 Identities=13% Similarity=0.012 Sum_probs=237.7
Q ss_pred CCCCHHHHCCCCHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 2331535049906899999869986668999-989713789995699645313330002789997655788998026779
Q 001406 528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPH-AVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL 606 (1083)
Q Consensus 528 ~~~~~ac~fGdveVv~~LLq~GvlrC~~p~~-~~G~tPL~iA~~ng~~cseVv~feyl~~~~a~in~~d~~g~~~t~l~l 606 (1083)
+.+..||..|++++++.||+.|++ .+..+ ..|+||||+||.+|+ .++++ +++..+++++..+..+ .++++.
T Consensus 27 t~L~~Av~~g~~~~V~~LL~~Gad--vn~~~~~~g~TpLh~A~~~g~--~~iv~--~Ll~~ga~~~~~~~~~--~~~~~~ 98 (337)
T 4g8k_A 27 HLLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSR--EDIVE--LLLRHGADPVLRKKNG--ATPFIL 98 (337)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTCC--TTCCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCHHHHCCCC--CCHHHH
T ss_conf 499999984899999999987999--783489899699999998498--99999--9987599533321578--864677
Q ss_pred -----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC-------CHHHHHHHHHH
Q ss_conf -----899999998099998677646020999999952730678999875129987667574-------21399999999
Q 001406 607 -----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHV-------EKYQILQKIMK 674 (1083)
Q Consensus 607 -----~lrivkLLl~~g~~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~~ad~n~~s~~~-------~~~~~l~~~a~ 674 (1083)
...+..++...+...+..+..|.+++++|+..+. .+.+..+++.+++++...... ..+.++++.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~--~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~ 176 (337)
T 4g8k_A 99 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK--VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 176 (337)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTC--HHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHH
T ss_pred HHHCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCC--HHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 775054135677631020055530379987999987186--999999997599834333013220003678976999999
Q ss_pred HHCHHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCC----HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf 8269999999996-899998557999939999998299----88899999679995203899997778999829999999
Q 001406 675 EKLYSWLLRKVCE-DGKGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA 749 (1083)
Q Consensus 675 ~~~~~~lv~~Lle-~Gadvn~~d~~G~TpLHlAa~~G~----~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~ 749 (1083)
..++..++++|++ .|++++.++..|.|+||.++..+. ..++++|+++|+++|.+|..|+||||+|+..|+.++++
T Consensus 177 ~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~ 256 (337)
T 4g8k_A 177 EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 256 (337)
T ss_dssp HHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHH
T ss_pred HCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 87789999999863498967657889727899999737566899999999779998876899998789999851258999
Q ss_pred HHHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHH
Q ss_conf 9996-5999998889999999999899999984999999999982797534467568898996999889----9999999
Q 001406 750 VLLS-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTV 824 (1083)
Q Consensus 750 ~LL~-~GAdvn~~td~~~kD~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~~adln~~d~~g~tal~~a~----~~~v~~L 824 (1083)
.|+. .|++++. +|..|.||||+|+..|+.+++++|+++|++ ++.+ ++++.+. .++++.|
T Consensus 257 ~Ll~~~~~~vn~------~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd-----~n~~-----~~L~~A~~~~~~~iv~~L 320 (337)
T 4g8k_A 257 RLLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGAS-----TDCG-----DLVMTARRNYDHSLVKVL 320 (337)
T ss_dssp HHHTSTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHTTSCS-----STTC-----CHHHHHHHTTCHHHHHHH
T ss_pred HHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCC-----CHHHHHHHCCCHHHHHHH
T ss_conf 998734875667------689999999999986879999999987899-----9987-----899999986999999999
Q ss_pred HHHCCCCCC
Q ss_conf 982279999
Q 001406 825 SEKTATPAN 833 (1083)
Q Consensus 825 le~~a~~~a 833 (1083)
+++||+++.
T Consensus 321 l~~GA~~d~ 329 (337)
T 4g8k_A 321 LSHGAKEDF 329 (337)
T ss_dssp HHTTCCC--
T ss_pred HHCCCCCCC
T ss_conf 987699898
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=1.00 E-value=1 Score=253.92 Aligned_cols=281 Identities=15% Similarity=0.029 Sum_probs=230.4
Q ss_pred CCCHHHHCCCCHHHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf 33153504990689999986-9986668999989713789995699645313330002789997655788998026779-
Q 001406 529 KCKWSCMFAEVEVPAEVLAD-GVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL- 606 (1083)
Q Consensus 529 ~~~~ac~fGdveVv~~LLq~-GvlrC~~p~~~~G~tPL~iA~~ng~~cseVv~feyl~~~~a~in~~d~~g~~~t~l~l- 606 (1083)
.+++||..|+.+++..++.. ++. .+..+..|.||||+|+..++ .+++. +++..+++++..+..| .+++|+
T Consensus 27 ~L~~A~~~g~~~~v~~ll~~~~~~--~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A 98 (351)
T 3utm_A 27 ELLEAARSGNEEKLMALLTPLNVN--CHASDGRKSTPLHLAAGYNR--VRIVQ--LLLQHGADVHAKDKGG--LVPLHNA 98 (351)
T ss_dssp HHHHHHHHTCHHHHHHHCCTTTTT--CCCSSTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHH
T ss_conf 599999839989999999864888--65579999889999998599--99999--9997699997617999--8089999
Q ss_pred ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCH-----------------
Q ss_conf ----89999999809999867764602099999995273067899987512998766757421-----------------
Q 001406 607 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEK----------------- 665 (1083)
Q Consensus 607 ----~lrivkLLl~~g~~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~~ad~n~~s~~~~~----------------- 665 (1083)
+..++++|+..+...+..+..|.+++|+|+..++. +.+++|++.+++.+..+..+..
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 176 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRV--EVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYE 176 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH--HHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 977889999999977999997788899899999974999--999999976999863367898623777533258999864
Q ss_pred --HHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC---CHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf --399999999826999999999689999855799993999999829---988899999679995203899997778999
Q 001406 666 --YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG---YDWAIKPTVTAGVSINFRDLSGWTALHWAA 740 (1083)
Q Consensus 666 --~~~l~~~a~~~~~~~lv~~Lle~Gadvn~~d~~G~TpLHlAa~~G---~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa 740 (1083)
+..+...+... ....+..++..+......+..|.||||+|+..+ ...++++|+..|++++.+|..|+||||+|+
T Consensus 177 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 255 (351)
T 3utm_A 177 FKGHSLLQAAREA-DLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAA 255 (351)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HCCCHHHHHHHHC-CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 0421799999832-499999999700013357888998899999971755899999999759996776999998999999
Q ss_pred HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 82999999999965999998889999999999899999984999999999982797534467568898996999889999
Q 001406 741 YCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA 820 (1083)
Q Consensus 741 ~~G~~eiV~~LL~~GAdvn~~td~~~kD~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~~adln~~d~~g~tal~~a~~~~ 820 (1083)
..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++ ++..+..|.||++++...+
T Consensus 256 ~~g~~~~v~~Ll~~ga~~n~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad-----~~~~~~~g~tal~~a~~~~ 324 (351)
T 3utm_A 256 ERAHNDVMEVLHKHGAKMNA------LDSLGQTALHRAALAGHLQTCRLLLSYGSD-----PSIISLQGFTAAQMGNEAV 324 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHSCHHH
T ss_pred HCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHHH
T ss_conf 85989899999987999877------599999889999982859999999984999-----8886889988365636999
Q ss_pred HHHHHHHCCCC
Q ss_conf 99999822799
Q 001406 821 VQTVSEKTATP 831 (1083)
Q Consensus 821 v~~Lle~~a~~ 831 (1083)
++.|.+.....
T Consensus 325 ~~~l~~~~~~~ 335 (351)
T 3utm_A 325 QQILSESTPMR 335 (351)
T ss_dssp HHHHHHC----
T ss_pred HHHHHHCCCCC
T ss_conf 99987606223
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=251.94 Aligned_cols=257 Identities=14% Similarity=0.035 Sum_probs=207.7
Q ss_pred CCCHHHHCCCCHHHHHHHHCCCCCCCCCC-CCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf 33153504990689999986998666899-9989713789995699645313330002789997655788998026779-
Q 001406 529 KCKWSCMFAEVEVPAEVLADGVLCCRIPP-HAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL- 606 (1083)
Q Consensus 529 ~~~~ac~fGdveVv~~LLq~GvlrC~~p~-~~~G~tPL~iA~~ng~~cseVv~feyl~~~~a~in~~d~~g~~~t~l~l- 606 (1083)
.+++||..|+++++..|++.|+. .+.. +..|.||||+|+..++ .+++. +++..+++++..+..| .+++|+
T Consensus 8 ~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A 79 (285)
T 1wdy_A 8 LLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSR--EDIVE--LLLRHGADPVLRKKNG--ATPFLLA 79 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHH
T ss_conf 99999971899999999986998--432038999869999997697--99999--9997699975458789--9899999
Q ss_pred ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC-------CCHHHHHHHHHHH
Q ss_conf ----89999999809999867764602099999995273067899987512998766757-------4213999999998
Q 001406 607 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQH-------VEKYQILQKIMKE 675 (1083)
Q Consensus 607 ----~lrivkLLl~~g~~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~~ad~n~~s~~-------~~~~~~l~~~a~~ 675 (1083)
+..++++|+..+...+..+..|.+++|+|+..++. +.+++|++.+.+.+..... ...+.++++.+..
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV--KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCH--HHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCH--HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
T ss_conf 974999999999975999876584568899999990988--999999984899441104478888660279869999998
Q ss_pred HCHHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCC----HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Q ss_conf 2699999999968-99998557999939999998299----888999996799952038999977789998299999999
Q 001406 676 KLYSWLLRKVCED-GKGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAV 750 (1083)
Q Consensus 676 ~~~~~lv~~Lle~-Gadvn~~d~~G~TpLHlAa~~G~----~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~ 750 (1083)
.++..+++.|++. |++++..+..|.||||+|+..|+ ..++++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 158 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 237 (285)
T 1wdy_A 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 237 (285)
T ss_dssp HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
T ss_conf 39899999999966999875488999878999981562338999999997699998868779868999998299999999
Q ss_pred HHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 996-59999988899999999998999999849999999999827975344675688
Q 001406 751 LLS-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMND 806 (1083)
Q Consensus 751 LL~-~GAdvn~~td~~~kD~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~~adln~~d 806 (1083)
|++ .|++++. +|..|.||||+|+..|+.+++++|+++|++ ++.+|
T Consensus 238 Ll~~~g~~~~~------~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~-----~~~~d 283 (285)
T 1wdy_A 238 LLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGAS-----TDCGD 283 (285)
T ss_dssp HHHSSSCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSSC-----SCCSS
T ss_pred HHHCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCC
T ss_conf 99636998545------089998399999983949999999975999-----98555
No 6
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=250.21 Aligned_cols=247 Identities=17% Similarity=0.089 Sum_probs=148.4
Q ss_pred CCCHHHHCCCCHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHCCCCCCCEEEEEE------CCCCCCCCCCCCCCCCCC
Q ss_conf 331535049906899999869986668999-9897137899956996453133300------027899976557889980
Q 001406 529 KCKWSCMFAEVEVPAEVLADGVLCCRIPPH-AVGRVPFYITCSNRLACSEVREFDY------IVGSVKDADISDIYGSST 601 (1083)
Q Consensus 529 ~~~~ac~fGdveVv~~LLq~GvlrC~~p~~-~~G~tPL~iA~~ng~~cseVv~fey------l~~~~a~in~~d~~g~~~ 601 (1083)
.+++|+..| .+++..|+..++ +..+ ..|+||||+|+.+++ .+++.+.+ ++..+++++..+..| .
T Consensus 97 ~L~~Aa~~~-~~~~~~L~~~~~----n~~d~~~g~t~Lh~Aa~~g~--~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g--~ 167 (373)
T 2fo1_E 97 KLHTEAAGS-YAITEPITRESV----NIIDPRHNRTVLHWIASNSS--AEKSEDLIVHEAKECIAAGADVNAMDCDE--N 167 (373)
T ss_dssp HHHHHHHSS-SCCCSCCSTTTT----TTCCCSSCCCHHHHHHCTTC--CSCCTTHHHHHHHHHHHTCCCTTCCCTTS--C
T ss_pred HHHHHHCCC-CHHHHHHCCCCC----CCCCCCCCCCHHHHHHHCCC--HHHHHHHHHHHHHHHHHCCCCCCCCCCCC--C
T ss_conf 799986387-168887500234----33577679888999987798--77899999999999986599876778999--8
Q ss_pred CHHHH-----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHC---CCCCCCCCCCCHHHHHHHHH
Q ss_conf 26779-----89999999809999867764602099999995273067899987512---99876675742139999999
Q 001406 602 SESFL-----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEA---NPEKNLSQHVEKYQILQKIM 673 (1083)
Q Consensus 602 t~l~l-----~lrivkLLl~~g~~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~~---ad~n~~s~~~~~~~~l~~~a 673 (1083)
|+||+ +..++++|+..|+..+..+..|.+++|+|+..++. +.+++|++.+ .+.+..+..+ .++++.+
T Consensus 168 TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~~~d~~g---~t~L~~A 242 (373)
T 2fo1_E 168 TPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF--GMMVYMLNSTKLKGDIEELDRNG---MTALMIV 242 (373)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCH--HHHHHHTTSHHHHHTTSCCCTTS---CCHHHHH
T ss_pred CHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCHHHCCCCC---CCHHHHH
T ss_conf 989999986949999999977999761589898799999877998--89999984576556732237789---9799999
Q ss_pred HHHC---HHHHHHHHHHCCCCCCC--------CCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHH
Q ss_conf 9826---99999999968999985--------5799993999999829988899999679-9952038999977789998
Q 001406 674 KEKL---YSWLLRKVCEDGKGPCI--------LDDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAY 741 (1083)
Q Consensus 674 ~~~~---~~~lv~~Lle~Gadvn~--------~d~~G~TpLHlAa~~G~~~iv~~LL~~G-adin~~D~~G~TpLH~Aa~ 741 (1083)
...+ ...++++|++.|++++. .+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+.
T Consensus 243 ~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~ 322 (373)
T 2fo1_E 243 AHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ 322 (373)
T ss_dssp HHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98378344999999997799765555444575554588899999980999999999973689866769899989999998
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf 299999999996599999888999999999989999998499999999998279
Q 001406 742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSL 795 (1083)
Q Consensus 742 ~G~~eiV~~LL~~GAdvn~~td~~~kD~~G~TPLhlAa~~G~~~iv~~LLe~g~ 795 (1083)
.|+.++|++|+++|++++. +|..|.||||+|+.+|+.+++++|+++++
T Consensus 323 ~g~~~iv~~Ll~~gad~~~------~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 323 EGRIEVVMYLIQQGASVEA------VDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp HTCHHHHHHHHHTTCCSSC------CCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCC
T ss_conf 6899999999976998547------79899999999998598889999873373
No 7
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=1.00 E-value=1 Score=244.93 Aligned_cols=222 Identities=13% Similarity=0.090 Sum_probs=182.2
Q ss_pred CCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 22331535049906899999869986668999989713789995699645313330002789997655788998026779
Q 001406 527 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL 606 (1083)
Q Consensus 527 ~~~~~~ac~fGdveVv~~LLq~GvlrC~~p~~~~G~tPL~iA~~ng~~cseVv~feyl~~~~a~in~~d~~g~~~t~l~l 606 (1083)
.+.+++||..|+++++..|++.|+. .+..+..|.||||+||.+++ .+++. +++..+++++.
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~------------- 81 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGVS--PTIQNRFGCTALHLACKFGC--VDTAK--YLASVGEVHSL------------- 81 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHCC--HHHHH--HHHHHCCCCCC-------------
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCC-------------
T ss_conf 9799999980999999999986989--42248999969999998598--99999--99977997545-------------
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH----CCCCCC-----------------CCCCCCH
Q ss_conf 8999999980999986776460209999999527306789998751----299876-----------------6757421
Q 001406 607 HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVE----ANPEKN-----------------LSQHVEK 665 (1083)
Q Consensus 607 ~lrivkLLl~~g~~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~----~ad~n~-----------------~s~~~~~ 665 (1083)
..|.+++|+|+..++ .+++++|++. +.+.+. .+ ..
T Consensus 82 -------------------~~g~t~L~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 137 (364)
T 3ljn_A 82 -------------------WHGQKPIHLAVMANK--TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKH---CK 137 (364)
T ss_dssp -------------------BTTBCHHHHHHHTTC--HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEE---ES
T ss_pred -------------------CCCCCHHHHHHHCCC--HHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCCCC---CC
T ss_conf -------------------689988999988699--889999997133358777889863026766540356679---88
Q ss_pred HHHHHHHHHHHC--HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHH
Q ss_conf 399999999826--99999999968999985579999399999982998889999967999-----52038999977789
Q 001406 666 YQILQKIMKEKL--YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS-----INFRDLSGWTALHW 738 (1083)
Q Consensus 666 ~~~l~~~a~~~~--~~~lv~~Lle~Gadvn~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gad-----in~~D~~G~TpLH~ 738 (1083)
+.++++.+...+ +..++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 138 g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~ 217 (364)
T 3ljn_A 138 GQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHW 217 (364)
T ss_dssp CCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHH
T ss_pred CCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 98789999974996699999999769997362889998999999829899999998605541235552328899809999
Q ss_pred HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf 99829999999999659999988899999999998999999849999999999827975
Q 001406 739 AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTS 797 (1083)
Q Consensus 739 Aa~~G~~eiV~~LL~~GAdvn~~td~~~kD~~G~TPLhlAa~~G~~~iv~~LLe~g~~~ 797 (1083)
|+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++|+..
T Consensus 218 A~~~g~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 218 AILINWEDVAMRFVEMGIDVNM------EDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHTTTCHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred HHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHHCHHHHHHHHHHCCCCH
T ss_conf 9975988999999986999888------7999998899999838299999999748805
No 8
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=1.00 E-value=1 Score=243.24 Aligned_cols=246 Identities=15% Similarity=0.106 Sum_probs=207.1
Q ss_pred CCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH--
Q ss_conf 331535049906899999869986668999989713789995699645313330002789997655788998026779--
Q 001406 529 KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-- 606 (1083)
Q Consensus 529 ~~~~ac~fGdveVv~~LLq~GvlrC~~p~~~~G~tPL~iA~~ng~~cseVv~feyl~~~~a~in~~d~~g~~~t~l~l-- 606 (1083)
.+++||..|+.+++..||+.|+. ....+..|.+|++.++..+. ..+.. ++...+++++..+..| .|++++
T Consensus 62 pLh~A~~~g~~~iv~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~d~~g--~t~l~~A~ 133 (337)
T 4g8k_A 62 PLHNAVQMSREDIVELLLRHGAD--PVLRKKNGATPFILAAIAGS--VKLLK--LFLSKGADVNECDFYG--FTAFMEAA 133 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTC--HHHHH--HHHTTTCCTTCBCTTC--CBHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCC--HHHHCCCCCCHHHHHHHCCC--CHHHH--HHHHCCCHHHHHCCCC--CCHHHHHH
T ss_conf 99999984989999999875995--33321578864677775054--13567--7631020055530379--98799998
Q ss_pred ---HHHHHHHHHHCCCCCC----------CCCCCCCCHHHHHHHHCCCCHHHHHHHHH-HCCCCCCCCCCCCHHHHHHHH
Q ss_conf ---8999999980999986----------77646020999999952730678999875-129987667574213999999
Q 001406 607 ---HLRLERILSMRSSPQN----------HLSEGLCEKQKLISKIIQLKEEEESYQMV-EANPEKNLSQHVEKYQILQKI 672 (1083)
Q Consensus 607 ---~lrivkLLl~~g~~~~----------~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~-~~ad~n~~s~~~~~~~~l~~~ 672 (1083)
+..++++|+..++..+ ..+..|.+++|+|+..++. +++++|++ .+++++..+..+. ..+++.
T Consensus 134 ~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~--~~v~~LL~~~gad~n~~d~~g~--t~l~~~ 209 (337)
T 4g8k_A 134 VYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV--EVLKILLDEMGADVNACDNMGR--NALIHA 209 (337)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH--HHHHHHHHHSCCCTTCCCTTSC--CHHHHH
T ss_pred HCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCCCC--CHHHHH
T ss_conf 718699999999759983433301322000367897699999987789--9999998634989676578897--278999
Q ss_pred HH---HHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf 99---82699999999968999985579999399999982998889999967-999520389999777899982999999
Q 001406 673 MK---EKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTV 748 (1083)
Q Consensus 673 a~---~~~~~~lv~~Lle~Gadvn~~d~~G~TpLHlAa~~G~~~iv~~LL~~-Gadin~~D~~G~TpLH~Aa~~G~~eiV 748 (1083)
+. ......++++|++.|++++.+|..|+||||+|+..|+.++++.|+.. |+++|.+|..|+||||+|+..|+.++|
T Consensus 210 ~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv 289 (337)
T 4g8k_A 210 LLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA 289 (337)
T ss_dssp HHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
T ss_conf 99737566899999999779998876899998789999851258999998734875667689999999999986879999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf 9999659999988899999999998999999849999999999827975
Q 001406 749 AVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTS 797 (1083)
Q Consensus 749 ~~LL~~GAdvn~~td~~~kD~~G~TPLhlAa~~G~~~iv~~LLe~g~~~ 797 (1083)
++||++||+++. .+|||+|+.+|+.+++++|+++|+++
T Consensus 290 ~~Ll~~GAd~n~-----------~~~L~~A~~~~~~~iv~~Ll~~GA~~ 327 (337)
T 4g8k_A 290 ELLCKRGASTDC-----------GDLVMTARRNYDHSLVKVLLSHGAKE 327 (337)
T ss_dssp HHHHTTSCSSTT-----------CCHHHHHHHTTCHHHHHHHHHTTCCC
T ss_pred HHHHHCCCCCCC-----------CCHHHHHHHCCCHHHHHHHHHCCCCC
T ss_conf 999987899998-----------78999999869999999999876998
No 9
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=239.31 Aligned_cols=250 Identities=10% Similarity=-0.059 Sum_probs=172.7
Q ss_pred CCCHHHHCCCCHHHHHHHHCCC---------CCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 3315350499068999998699---------8666899998971378999569964531333000278999765578899
Q 001406 529 KCKWSCMFAEVEVPAEVLADGV---------LCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGS 599 (1083)
Q Consensus 529 ~~~~ac~fGdveVv~~LLq~Gv---------lrC~~p~~~~G~tPL~iA~~ng~~cseVv~feyl~~~~a~in~~d~~g~ 599 (1083)
.+|||++.|+...+..++..+. .......+..|+||||+|+..|+ .+++. +++..+++++..+..
T Consensus 18 ~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~--~~~v~--~Ll~~g~~~~~~~~~-- 91 (285)
T 3d9h_A 18 GSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGH--QLSLR--NLISQGWAVNIITAD-- 91 (285)
T ss_dssp ------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTC--HHHHH--HHHHTTCCSCEECTT--
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCC--
T ss_conf 888996317777756677776444532344417445887567888999998689--99999--999779999872889--
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHH
Q ss_conf 80267798999999980999986776460209999999527306789998751299876675742139999999982699
Q 001406 600 STSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYS 679 (1083)
Q Consensus 600 ~~t~l~l~lrivkLLl~~g~~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~~ad~n~~s~~~~~~~~l~~~a~~~~~~ 679 (1083)
|.+++|+|+..++ .+.+++|++.+++.+..+..+ .++++.+...+..
T Consensus 92 ----------------------------g~t~L~~A~~~g~--~~~v~~Ll~~ga~~~~~~~~g---~t~L~~A~~~~~~ 138 (285)
T 3d9h_A 92 ----------------------------HVSPLHEACLGGH--LSCVKILLKHGAQVNGVTADW---HTPLFNACVSGSW 138 (285)
T ss_dssp ----------------------------CCCHHHHHHHTTC--HHHHHHHHHTTCCSSCCCTTC---CCHHHHHHHHTCH
T ss_pred ----------------------------CCCHHHHHHHCCC--HHHHHHHHHCCCCCCCCCCCC---CCHHHHHHHCCHH
T ss_conf ----------------------------9889999998874--999999997789988878999---9899999986989
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf 99999996899998557999939999998299888999996799952038999977789998299999999996599999
Q 001406 680 WLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPG 759 (1083)
Q Consensus 680 ~lv~~Lle~Gadvn~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn 759 (1083)
.++++|++.|++++..+ .|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 139 ~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 139 DCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 217 (285)
T ss_dssp HHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHCCCCCCCCC-CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 99999997799988788-99789999998688999999997799988757889988999998390999999998789988
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH--HHHHHHHHHH-CCC
Q ss_conf 8889999999999899999984999999999982797534467568898996999889--9999999982-279
Q 001406 760 LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI--AKAVQTVSEK-TAT 830 (1083)
Q Consensus 760 ~~td~~~kD~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~~adln~~d~~g~tal~~a~--~~~v~~Lle~-~a~ 830 (1083)
. +..|.||||+|+..|+.+++++|++.|+ +++.++..|.||++++. ...++.|+++ +++
T Consensus 218 ~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-----d~~~~d~~g~t~l~~A~~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 218 Q-------GKGQDSPLHAVVRTASEELACLLMDFGA-----DTQAKNAEGKRPVELVPPESPLAQLFLEREGAS 279 (285)
T ss_dssp C-------CBTTBCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTSCCGGGGSCTTSHHHHHHHHHC---
T ss_pred C-------CCCCCCHHHHHHHCCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCC
T ss_conf 7-------9899989999988099999999997799-----987758899989998257528999999701368
No 10
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=238.55 Aligned_cols=221 Identities=16% Similarity=0.040 Sum_probs=153.2
Q ss_pred CCCCCHHHHCCCCHHHHHHHHCCCCC------CCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 22331535049906899999869986------668999989713789995699645313330002789997655788998
Q 001406 527 VAKCKWSCMFAEVEVPAEVLADGVLC------CRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSS 600 (1083)
Q Consensus 527 ~~~~~~ac~fGdveVv~~LLq~Gvlr------C~~p~~~~G~tPL~iA~~ng~~cseVv~feyl~~~~a~in~~d~~g~~ 600 (1083)
.+.+.+||..|+++++..||+.|... .....+..|.+||+.|+..+.. ..+ +.+++..++++|..+.+|
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~-~~~--v~~Ll~~Gadvn~~d~~G-- 86 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPA-QKR--LAKVPASGLGVNVTSQDG-- 86 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC-------------------------------------------CCCCTTCCCTTS--
T ss_pred HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCH-HHH--HHHHHHCCCCCCCCCCCC--
T ss_conf 249999998299999999997788421121122224586677899999984998-999--999998799988769999--
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHH
Q ss_conf 02677989999999809999867764602099999995273067899987512998766757421399999999826999
Q 001406 601 TSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSW 680 (1083)
Q Consensus 601 ~t~l~l~lrivkLLl~~g~~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~~ad~n~~s~~~~~~~~l~~~a~~~~~~~ 680 (1083)
.+++|+|+..++. +.+++|++.+++.+..+..+ .++++.+...+...
T Consensus 87 ----------------------------~TpLh~A~~~g~~--~~v~~Ll~~~a~~~~~~~~g---~t~l~~a~~~~~~~ 133 (269)
T 4b93_B 87 ----------------------------SSPLHVAALHGRA--DLIPLLLKHGANAGARNADQ---AVPLHLACQQGHFQ 133 (269)
T ss_dssp ----------------------------CCHHHHHHHTTCT--THHHHHHHTTCCTTCCCTTC---CCHHHHHHHHTCHH
T ss_pred ----------------------------CCHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCC---CCCCCCCCCCCHHH
T ss_conf ----------------------------9999999984969--99999986599867557899---98330000127299
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf 99999968999985579999399999982998889999967999520389999777899982999999999965999998
Q 001406 681 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGL 760 (1083)
Q Consensus 681 lv~~Lle~Gadvn~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~ 760 (1083)
+++.|++.|++++.+|..|+||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++|++||++||+++.
T Consensus 134 ~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 134 VVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
T ss_conf 99999987999887789999999999987899999999978799783214788389999986889999999987889988
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCC-HHHHHHHH
Q ss_conf 88999999999989999998499-99999999
Q 001406 761 LTDPSPEFPLSRTPSDLASSNGH-KGISGFLA 791 (1083)
Q Consensus 761 ~td~~~kD~~G~TPLhlAa~~G~-~~iv~~LL 791 (1083)
+|..|.||||+|+.+|+ .+++++|.
T Consensus 214 ------~d~~G~TpL~~A~~~~~i~~lL~~l~ 239 (269)
T 4b93_B 214 ------LNKRQRTAVDCAEQNSKIMELLQVVP 239 (269)
T ss_dssp ------CCTTSCCSGGGSCTTCHHHHHTTC--
T ss_pred ------CCCCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf ------69999999999883784999999998
Done!